Citrus Sinensis ID: 025124

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------
Protein Sequence
MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKSRDSPVGIPKSRL
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHccccEEEEccccccccccccccHHHHccHHEEccHHHHHHHHHHHHHHHHccccccccccccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEcccccccccccccccHHHHHHHHHHccccccccHHHHHHHHHHHHccccccccccEEEEcccccccccccccHHHHHHHHHHHHHHccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHccEEEEEEcccccccccHHHccHHHHHHHHHHHcHHHHHHHHHHHHHEEEEEEEcccccccEEEEEEccHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEEEccEccHHHccccccHHHHHHHHccccccccEcHHHHHHHHHHHHcHHHccccccEEEEcccHHccccccccHHHHHHHHHHHHHHccccccccccccc
Coil and Loop (DISEMBL)
MGRRKTVLRSAVAALHSLgipaiglegdvrkrEDAVRVVESTINHFGKLDILVNAAagnflvpaedlspngfrtVIEIDSVGTFIMCHEALKYLKkggrgqassssggiIINISATLHYTATWYQIHVSAAKAAVDSITRSLALewgtdyairvngiapgpikdtagvsklapeEIRSKATDYMAAYKFGEKWDIAMAALYLASdagkyvngntlivdggnwlsnprdlpkEAVNQLSRAVerksrdspvgipksrl
Flexible Loop (DISEMBL)
mgrrktvlRSAVAalhslgipaiglegdvrkREDAVRVVESTINHFGKLDILVNAAAGNFLVpaedlspngFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAirvngiapgpikdtagvsklapeEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLsraverksrdspvgipksrl
Low Complexity Region (SEG)
MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKggrgqassssggiiinisATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKSRDSPVGIPKSRL
Disordered region (IsUnstruct)
*******LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG*********GGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS*********************************
Disordered Region (DISOPRED)
*GRR*TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR****SSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLP***************************
Disordered Region (DISEMBL)
********RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL**********SSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVN**********************
Disordered Region (DISPRO)
*******LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERK*************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKSRDSPVGIPKSRL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	257	2.2.26 [Sep-21-2011]
Q9LTV6	298	Peroxisomal 2,4-dienoyl-C	yes	no	1.0	0.862	0.766	1e-100
Q5RBV3	292	Peroxisomal 2,4-dienoyl-C	yes	no	0.774	0.681	0.421	8e-38
Q6NV34	300	Peroxisomal 2,4-dienoyl-C	yes	no	0.754	0.646	0.432	1e-37
Q9NUI1	292	Peroxisomal 2,4-dienoyl-C	yes	no	0.762	0.671	0.417	7e-37
O34717	254	Probable 2,4-dienoyl-CoA	yes	no	0.844	0.854	0.384	2e-36
P32573	292	Peroxisomal 2,4-dienoyl-C	yes	no	0.719	0.633	0.410	6e-35
Q9Z2M4	292	Peroxisomal 2,4-dienoyl-C	yes	no	0.770	0.678	0.423	7e-34
Q9WV68	292	Peroxisomal 2,4-dienoyl-C	yes	no	0.762	0.671	0.436	1e-33
P39483	261	Glucose 1-dehydrogenase 2	no	no	0.766	0.754	0.342	3e-23
P10528	261	Glucose 1-dehydrogenase A	no	no	0.739	0.727	0.34	7e-23

>sp|Q9LTV6|DECR2_ARATH Peroxisomal 2,4-dienoyl-CoA reductase OS=Arabidopsis thaliana GN=At3g12800 PE=2 SV=1

 Score =  363 bits (931), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 197/257 (76%), Positives = 219/257 (85%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
           MGRRK VL  AV+AL SLGI AIGLEGDVRK+EDA RVVE+T  HFGKLDILVNAAAGNF
Sbjct: 42  MGRRKQVLDDAVSALRSLGIQAIGLEGDVRKQEDARRVVEATFQHFGKLDILVNAAAGNF 101

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
           L  AEDLSPNGFRTV++ID+VGTF MCH ALKYLKKG  G+ SSS GG IINISATLHYT
Sbjct: 102 LAAAEDLSPNGFRTVLDIDAVGTFNMCHAALKYLKKGAPGRDSSSGGGSIINISATLHYT 161

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
           A+WYQIHVSAAKAAVD+ TR+LALEWGTDY IRVNGIAPGPI  T G+SKL PEEI +K 
Sbjct: 162 ASWYQIHVSAAKAAVDATTRNLALEWGTDYDIRVNGIAPGPIGGTPGMSKLVPEEIENKT 221

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRA 240
            +YM  YK GEKWDIAMAALYL+ D+GKYV+G T++VDGG WLS PR LPKEAV QLSRA
Sbjct: 222 REYMPLYKVGEKWDIAMAALYLSCDSGKYVSGLTMVVDGGLWLSKPRHLPKEAVKQLSRA 281

Query: 241 VERKSRDSPVGIPKSRL 257
           VE++SR  PVG+P S+L
Sbjct: 282 VEKRSRAKPVGLPTSKL 298

Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: 3EC: 4

>sp|Q5RBV3|DECR2_PONAB Peroxisomal 2,4-dienoyl-CoA reductase OS=Pongo abelii GN=DECR2 PE=2 SV=1

 Score =  157 bits (396), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 119/209 (56%), Gaps = 10/209 (4%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81
            + L  DVR     V  V+  +  FG++DIL+N AAGNFL PA  LS N F+TV++ID+ 
Sbjct: 80  CLPLSMDVRAPPAIVAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTS 139

Query: 82  GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 141
           GTF +     +   +          GG+I+NI+ATL       Q+H  +AKAAVD++TR 
Sbjct: 140 GTFNVSRVLYEKFFR--------DHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRH 191

Query: 142 LALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAAL 200
           LA+EWG    IRVN +APGPI  T G+ +L  P+   S         + G K +IA + L
Sbjct: 192 LAVEWGPQN-IRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVL 250

Query: 201 YLASDAGKYVNGNTLIVDGGNWLSNPRDL 229
           YLAS    YV G  L+ DGG WL+ P D+
Sbjct: 251 YLASPLASYVTGAVLVADGGAWLTFPNDV 279

Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA. Has activity towards short and medium chain 2,4-dienoyl-CoAs, but also towards 2,4,7,10,13,16,19-docosaheptaenoyl-CoA, suggesting that it does not constitute a rate limiting step in the peroxisomal degradation of docosahexaenoic acid.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 4

>sp|Q6NV34|DECR2_DANRE Peroxisomal 2,4-dienoyl-CoA reductase OS=Danio rerio GN=decr2 PE=2 SV=1

 Score =  156 bits (395), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 89/206 (43%), Positives = 122/206 (59%), Gaps = 12/206 (5%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           DVR+ E  +  V+ T+  FG++DIL+N AAGNFL PA  LS N F+TV+EID++GTF   
Sbjct: 93  DVRQPETILAAVDETLKTFGRVDILINNAAGNFLCPATSLSFNAFKTVMEIDTMGTFNTS 152

Query: 88  HEAL-KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 146
                K+ K           GG I+NISATL Y     Q+H  +AKAA D++TR LA+EW
Sbjct: 153 KVIYDKWFK---------DHGGSIVNISATLGYRGQALQVHAGSAKAANDAMTRHLAVEW 203

Query: 147 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK-ATDYMAAYKFGEKWDIAMAALYLASD 205
           G    +RVN +APGPI  T G  +L      +  A   +   + G K ++A A L+LAS 
Sbjct: 204 GPS-GVRVNTVAPGPISGTEGYRRLGGSHAETAGAFHSIPLQRAGNKTEMAHAVLFLASR 262

Query: 206 AGKYVNGNTLIVDGGNWLSNPRDLPK 231
           A  YV G+ L+ DGG WL++  D+ +
Sbjct: 263 ASSYVTGSVLVADGGAWLTSANDVER 288

Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA.

Danio rerio (taxid: 7955)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 4

>sp|Q9NUI1|DECR2_HUMAN Peroxisomal 2,4-dienoyl-CoA reductase OS=Homo sapiens GN=DECR2 PE=1 SV=1

 Score =  154 bits (388), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 86/206 (41%), Positives = 117/206 (56%), Gaps = 10/206 (4%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81
            + L  DVR     +  V+  +  FG++DIL+N AAGNFL PA  LS N F+TV++ID+ 
Sbjct: 80  CLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTS 139

Query: 82  GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 141
           GTF +     +   +          GG+I+NI+ATL       Q+H  +AKAAVD++TR 
Sbjct: 140 GTFNVSRVLYEKFFR--------DHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRH 191

Query: 142 LALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAAL 200
           LA+EWG    IRVN +APGPI  T G+ +L  P+   S         + G K +IA + L
Sbjct: 192 LAVEWGPQN-IRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVL 250

Query: 201 YLASDAGKYVNGNTLIVDGGNWLSNP 226
           YLAS    YV G  L+ DGG WL+ P
Sbjct: 251 YLASPLASYVTGAVLVADGGAWLTFP 276

Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA. Has activity towards short and medium chain 2,4-dienoyl-CoAs, but also towards 2,4,7,10,13,16,19-docosaheptaenoyl-CoA, suggesting that it does not constitute a rate limiting step in the peroxisomal degradation of docosahexaenoic acid.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 4

>sp|O34717|FADH_BACSU Probable 2,4-dienoyl-CoA reductase OS=Bacillus subtilis (strain 168) GN=fadH PE=2 SV=1

 Score =  152 bits (385), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 87/226 (38%), Positives = 125/226 (55%), Gaps = 9/226 (3%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
           GR    L      + +        + DVR    A  +++  +  FG+LD L+N AAGNF+
Sbjct: 34  GRNHEALEETKKEIQTFEGQVACFQMDVRSDSAASDMIKEAVKAFGRLDALINNAAGNFI 93

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            PAE L+PNG++ VIEI   GTF  C +A        R        G+I+N++AT  + A
Sbjct: 94  CPAEKLTPNGWKAVIEIVLNGTFF-CSQA------AARHWIDQKQQGVILNMAATYAWGA 146

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKA 180
               +H +AAKA V S+TR+LA+EWG+ Y IR N IAPGPI+ T G  KL   E+  ++ 
Sbjct: 147 GAGVVHSAAAKAGVLSLTRTLAVEWGSKYGIRTNAIAPGPIERTGGAEKLFESEKAMART 206

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNP 226
            + +   + G   +IA  A +L SD   Y+NG+ + +DGG WL NP
Sbjct: 207 MNSVPLGRLGTPEEIAALAAFLLSDEASYINGDCITMDGGQWL-NP 251

Auxiliary enzyme of beta-oxidation. It participates in the metabolism of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA.

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 4

>sp|P32573|SPS19_YEAST Peroxisomal 2,4-dienoyl-CoA reductase SPS19 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SPS19 PE=1 SV=4

 Score =  147 bits (371), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 80/195 (41%), Positives = 114/195 (58%), Gaps = 10/195 (5%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           DVR  E     V+ T+  FGK+D ++  AAGNF+    +LSPN F++V++ID +G+F   
Sbjct: 85  DVRNFEQVENAVKKTVEKFGKIDFVIAGAAGNFVCDFANLSPNAFKSVVDIDLLGSFNTA 144

Query: 88  HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 147
              LK LKK         S G I+ +SAT HY    +Q HV AAKA +D++ ++LA+E G
Sbjct: 145 KACLKELKK---------SKGSILFVSATFHYYGVPFQGHVGAAKAGIDALAKNLAVELG 195

Query: 148 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 207
               IR N IAPG I +T G+ +LA ++ + KA   +   + G   DIA + +Y+ S A 
Sbjct: 196 P-LGIRSNCIAPGAIDNTEGLKRLAGKKYKEKALAKIPLQRLGSTRDIAESTVYIFSPAA 254

Query: 208 KYVNGNTLIVDGGNW 222
            YV G  L+VDGG W
Sbjct: 255 SYVTGTVLVVDGGMW 269

Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA. Dispensable for growth and sporulation on solid acetate and oleate media, but is essential for these processes to occur on petroselineate.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 4

>sp|Q9Z2M4|DECR2_RAT Peroxisomal 2,4-dienoyl-CoA reductase OS=Rattus norvegicus GN=Decr2 PE=2 SV=1

 Score =  144 bits (363), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 89/210 (42%), Positives = 126/210 (60%), Gaps = 12/210 (5%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81
            + L  DVR     +  V+  +  FGK+DIL+N AAGNFL PA  LS N F+TV++ID++
Sbjct: 80  CLPLSMDVRVPPAVMAAVDQALKEFGKIDILINCAAGNFLCPASALSFNAFKTVVDIDTL 139

Query: 82  GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 141
           GTF +     +   +          GG+I+NI+ATL       Q+H  AAKAAVD++TR 
Sbjct: 140 GTFNVSRVLYEKFFR--------DHGGVIVNITATLSMRGQVLQLHAGAAKAAVDAMTRH 191

Query: 142 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA--YKFGEKWDIAMAA 199
           LA+EWG    IRVN +APG I  T G+ +L   +  SK   Y+++   + G K +IA + 
Sbjct: 192 LAVEWGPQ-NIRVNSLAPGAISGTEGLRRLGGPKASSK-FKYLSSPIPRLGTKTEIAHSV 249

Query: 200 LYLASDAGKYVNGNTLIVDGGNWLSNPRDL 229
           LYLAS    YV+G  L+VDGG+W++ P D+
Sbjct: 250 LYLASPLASYVSGIVLVVDGGSWMTLPNDI 279

Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA. Has activity towards short and medium chain 2,4-dienoyl-CoAs, but also towards 2,4,7,10,13,16,19-docosaheptaenoyl-CoA, suggesting that it does not constitute a rate limiting step in the peroxisomal degradation of docosahexaenoic acid.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 4

>sp|Q9WV68|DECR2_MOUSE Peroxisomal 2,4-dienoyl-CoA reductase OS=Mus musculus GN=Decr2 PE=1 SV=1

 Score =  143 bits (361), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/206 (43%), Positives = 125/206 (60%), Gaps = 10/206 (4%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81
            + L  DVR   + +  V+  +  FGK++IL+N AAGNFL PA  LS N F+TV++ID++
Sbjct: 80  CLPLSMDVRVPPEVMTAVDQALQEFGKINILINCAAGNFLCPASALSFNAFKTVVDIDTI 139

Query: 82  GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 141
           GTF +   ++ Y KK  R       GG+I+NI+ATL       Q+H  AAKAAVD++TR 
Sbjct: 140 GTFNV--SSVLY-KKFFRDH-----GGVIVNITATLSMRGQVLQLHAGAAKAAVDAMTRH 191

Query: 142 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-KFGEKWDIAMAAL 200
           LA+EWG    IRVN +APG I  T G+ +L      SK   +     + G K +IA + L
Sbjct: 192 LAVEWGPQ-NIRVNSLAPGAISGTEGLRRLRGSNASSKLKHFSNPIPRLGTKTEIAHSVL 250

Query: 201 YLASDAGKYVNGNTLIVDGGNWLSNP 226
           YLAS    YV+G  L+VDGG+W++ P
Sbjct: 251 YLASPLASYVSGIVLVVDGGSWMTFP 276

Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA. Has activity towards short and medium chain 2,4-dienoyl-CoAs, but also towards 2,4,7,10,13,16,19-docosaheptaenoyl-CoA, suggesting that it does not constitute a rate limiting step in the peroxisomal degradation of docosahexaenoic acid.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 4

>sp|P39483|DHG2_BACME Glucose 1-dehydrogenase 2 OS=Bacillus megaterium GN=gdhII PE=3 SV=1

 Score =  108 bits (271), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 103/207 (49%), Gaps = 10/207 (4%)

Query: 15  LHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRT 74
           +   G  AI + GDV K ED V +VE+ +  FG LD+++N A     VP+ +LS   +  
Sbjct: 52  IEEAGGQAIIVRGDVTKEEDVVNLVETAVKEFGSLDVMINNAGVENPVPSHELSLENWNQ 111

Query: 75  VIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-YQIHVSAAKA 133
           VI+ +  G F+   EA+KY          +   G +IN+S ++H    W   +H +A+K 
Sbjct: 112 VIDTNLTGAFLGSREAIKYF-------VENDIKGNVINMS-SVHEMIPWPLFVHYAASKG 163

Query: 134 AVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW 193
            +  +T +LALE+     IRVN I PG I       K A  E R+     +     G+  
Sbjct: 164 GMKLMTETLALEYAPK-GIRVNNIGPGAIDTPINAEKFADPEQRADVESMIPMGYIGKPE 222

Query: 194 DIAMAALYLASDAGKYVNGNTLIVDGG 220
           +IA  A +LAS    YV G TL  DGG
Sbjct: 223 EIASVAAFLASSQASYVTGITLFADGG 249

Bacillus megaterium (taxid: 1404)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 4

EC: 7

>sp|P10528|DHGA_BACME Glucose 1-dehydrogenase A OS=Bacillus megaterium GN=gdhA PE=3 SV=1

 Score =  107 bits (268), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 68/200 (34%), Positives = 103/200 (51%), Gaps = 10/200 (5%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81
           AI ++GDV K ED V +V++ I  FG LD+++N A     VP+ +LS + +  VI+ +  
Sbjct: 59  AIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLT 118

Query: 82  GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-YQIHVSAAKAAVDSITR 140
           G F+   EA+KY          +   G +IN+S ++H    W   +H +A+K  +  +T 
Sbjct: 119 GAFLGSREAIKYF-------VENDIKGNVINMS-SVHEMIPWPLFVHYAASKGGMKLMTE 170

Query: 141 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 200
           +LALE+     IRVN I PG +       K A  E R+     +     G+  ++A  A 
Sbjct: 171 TLALEYAPK-GIRVNNIGPGAMNTPINAEKFADPEQRADVESMIPMGYIGKPEEVAAVAA 229

Query: 201 YLASDAGKYVNGNTLIVDGG 220
           +LAS    YV G TL  DGG
Sbjct: 230 FLASSQASYVTGITLFADGG 249

Bacillus megaterium (taxid: 1404)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 4

EC: 7

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	257
225423652	297	PREDICTED: peroxisomal 2,4-dienoyl-CoA r	0.996	0.861	0.801	1e-115
255565323	298	2,4-dienoyl-CoA reductase, putative [Ric	1.0	0.862	0.774	1e-114
224120278	299	predicted protein [Populus trichocarpa]	1.0	0.859	0.782	1e-114
225462240	297	PREDICTED: peroxisomal 2,4-dienoyl-CoA r	0.996	0.861	0.793	1e-114
388502636	297	unknown [Lotus japonicus]	0.996	0.861	0.770	1e-111
358248016	298	uncharacterized protein LOC100793630 [Gl	1.0	0.862	0.782	1e-108
358249176	298	uncharacterized protein LOC100800885 [Gl	1.0	0.862	0.774	1e-108
449444144	297	PREDICTED: peroxisomal 2,4-dienoyl-CoA r	0.996	0.861	0.766	1e-108
297834090	298	short-chain dehydrogenase/reductase fami	1.0	0.862	0.762	1e-104
115460520	299	Os04g0614000 [Oryza sativa Japonica Grou	0.996	0.856	0.712	1e-102

>gi|225423652|ref|XP_002275982.1| PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase [Vitis vinifera] gi|147772171|emb|CAN73418.1| hypothetical protein VITISV_019955 [Vitis vinifera] gi|297737992|emb|CBI27193.3| unnamed protein product [Vitis vinifera]

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 206/257 (80%), Positives = 230/257 (89%), Gaps = 1/257 (0%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
           MGRR+ VL +AV++LHSLGIPAIGLEGDVRK+EDAVRV+ESTI HFG+LDILVNAAAGNF
Sbjct: 42  MGRRRQVLDAAVSSLHSLGIPAIGLEGDVRKQEDAVRVLESTIKHFGRLDILVNAAAGNF 101

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
           LVPAEDLSP GF+TVI+IDSVGTF MCHEAL+YLKKGG G+ S S+GGIIINISATLHYT
Sbjct: 102 LVPAEDLSPKGFQTVIDIDSVGTFTMCHEALQYLKKGGPGK-SPSTGGIIINISATLHYT 160

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
           ATWYQIHVSAAKAAVDSITRSLALEWGTDY IRVNGIAPGPI DTAG+SKLAPE++  KA
Sbjct: 161 ATWYQIHVSAAKAAVDSITRSLALEWGTDYDIRVNGIAPGPIDDTAGLSKLAPEDVVRKA 220

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRA 240
            ++   +K GEKWDIAMAA+YLAS+AGKY+NG TL VDGG WLS PR L KEAV QLSRA
Sbjct: 221 KEHEPLFKLGEKWDIAMAAVYLASNAGKYINGTTLTVDGGLWLSKPRHLSKEAVKQLSRA 280

Query: 241 VERKSRDSPVGIPKSRL 257
           VER+SR   VG+PKS+L
Sbjct: 281 VERRSRKILVGVPKSKL 297

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255565323|ref|XP_002523653.1| 2,4-dienoyl-CoA reductase, putative [Ricinus communis] gi|223537105|gb|EEF38739.1| 2,4-dienoyl-CoA reductase, putative [Ricinus communis]

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 199/257 (77%), Positives = 229/257 (89%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
           MGRRK VL SAVA+LHSLGIPAIGLEGDVRK++DAV+++EST+ HFG+LDILVNAAAGNF
Sbjct: 42  MGRRKNVLLSAVASLHSLGIPAIGLEGDVRKKDDAVKILESTVRHFGRLDILVNAAAGNF 101

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
           LV +EDLSPNGFRTVI+IDSVGTF MCHEA KYLKKGG+G+  S+ GGIIINISATLHYT
Sbjct: 102 LVASEDLSPNGFRTVIDIDSVGTFTMCHEAFKYLKKGGQGKDPSTGGGIIINISATLHYT 161

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
           ATWYQIHVSAAKAAVDSITRSLALEWGT+Y I+VNGIAPGPI DTAG+SKLAPEEI  +A
Sbjct: 162 ATWYQIHVSAAKAAVDSITRSLALEWGTEYDIKVNGIAPGPIGDTAGLSKLAPEEILREA 221

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRA 240
            + +   K GEKWDIAMAALYL SDAGK+VNG  L+VDGG+WL  P  LPK+AV QLSR 
Sbjct: 222 KEKLPLDKLGEKWDIAMAALYLTSDAGKHVNGTILVVDGGDWLRKPPHLPKDAVKQLSRV 281

Query: 241 VERKSRDSPVGIPKSRL 257
           VE++S+++PVG+PKS+L
Sbjct: 282 VEKRSKNAPVGVPKSKL 298

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120278|ref|XP_002318290.1| predicted protein [Populus trichocarpa] gi|222858963|gb|EEE96510.1| predicted protein [Populus trichocarpa]

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 201/257 (78%), Positives = 226/257 (87%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
           MGRRK V+ SAV++L+SLGIPAIG EGDVRKREDA+RVVEST  HFG+LDILVNAAAGNF
Sbjct: 43  MGRRKHVVDSAVSSLNSLGIPAIGFEGDVRKREDAIRVVESTFKHFGRLDILVNAAAGNF 102

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
           LVP+EDLS NGFRTV++IDSVGTF MCHEALKYLKKGG G+  S++GG IINISATLHYT
Sbjct: 103 LVPSEDLSSNGFRTVMDIDSVGTFTMCHEALKYLKKGGLGKDPSTAGGTIINISATLHYT 162

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
           ATWYQIHVSAAKAAVDSITR+LALEWGTDY IRVNGIAPGPI DTAG+SKL  E I SKA
Sbjct: 163 ATWYQIHVSAAKAAVDSITRNLALEWGTDYDIRVNGIAPGPIGDTAGMSKLGLEGILSKA 222

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRA 240
            + M  +K GEKWDIAMAA+YLASDAGKYVNG TL+VDGG WLS PR  PK+AV QLSR 
Sbjct: 223 MEKMPLFKVGEKWDIAMAAVYLASDAGKYVNGTTLVVDGGEWLSKPRHFPKDAVKQLSRV 282

Query: 241 VERKSRDSPVGIPKSRL 257
           VE++S+ +P GIP+S+L
Sbjct: 283 VEKRSKHAPAGIPRSKL 299

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225462240|ref|XP_002262755.1| PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase [Vitis vinifera] gi|297736138|emb|CBI24176.3| unnamed protein product [Vitis vinifera]

 Score =  415 bits (1067), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 204/257 (79%), Positives = 225/257 (87%), Gaps = 1/257 (0%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
           MGRRK VL SAV+ L S GIPA+G  GDVRK+EDA RVVEST+ HFG+LDILVNAAAGNF
Sbjct: 42  MGRRKQVLDSAVSGLCSQGIPAVGFVGDVRKQEDAKRVVESTVKHFGRLDILVNAAAGNF 101

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
           LV +EDLSPNGFRTV++IDSVGTF MCHEALKYLKKGG G+ S SSGG I+NISATLHYT
Sbjct: 102 LVSSEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKGGPGR-SFSSGGSILNISATLHYT 160

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
           A WYQIHVSAAKAAVD+ TR+LALEWGTDY IRVNGIAPGPI DTAG+SKLAPEEI +KA
Sbjct: 161 AAWYQIHVSAAKAAVDATTRNLALEWGTDYDIRVNGIAPGPIGDTAGMSKLAPEEISNKA 220

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRA 240
            + M  YK GEKWDIAMAALYLASDAGKY+NG TL+VDGG WLS PR LPKEAV QLSRA
Sbjct: 221 REIMPLYKLGEKWDIAMAALYLASDAGKYINGTTLVVDGGLWLSRPRHLPKEAVKQLSRA 280

Query: 241 VERKSRDSPVGIPKSRL 257
           VE++SR  PVG+PKS+L
Sbjct: 281 VEKRSRGVPVGVPKSKL 297

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388502636|gb|AFK39384.1| unknown [Lotus japonicus]

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 198/257 (77%), Positives = 222/257 (86%), Gaps = 1/257 (0%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
           MGRRK VL SAV+ L SL IPAIG  GDVRK+EDA RVVEST  HFGK+DILVNAAAGNF
Sbjct: 42  MGRRKQVLDSAVSVLQSLSIPAIGFVGDVRKQEDAARVVESTFKHFGKIDILVNAAAGNF 101

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
           LV AEDLSPNGFRTV++IDSVGTF MC EALKYLKKGG G+ SS +G II NISATLHYT
Sbjct: 102 LVSAEDLSPNGFRTVLDIDSVGTFTMCSEALKYLKKGGLGRGSSGAGAII-NISATLHYT 160

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
           A+WYQIHVSAAKAAVD+ TR+LALEWGTDY IRVNGIAPGPI  T G+SKLAP+EI +K+
Sbjct: 161 ASWYQIHVSAAKAAVDATTRNLALEWGTDYDIRVNGIAPGPISGTPGMSKLAPDEINNKS 220

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRA 240
            DYM  YK GEKWDIAMAAL+L SDAGKY+NG+TLIVDGG WLS PR LPKEAV Q SRA
Sbjct: 221 KDYMPLYKEGEKWDIAMAALFLVSDAGKYINGDTLIVDGGLWLSRPRHLPKEAVKQASRA 280

Query: 241 VERKSRDSPVGIPKSRL 257
           +E++SR+ P+G+PKS+L
Sbjct: 281 IEKRSRNQPIGVPKSKL 297

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248016|ref|NP_001239792.1| uncharacterized protein LOC100793630 [Glycine max] gi|255647355|gb|ACU24144.1| unknown [Glycine max]

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 201/257 (78%), Positives = 228/257 (88%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
           MGRRK VL+SAV+ L SL IPA+G EGDVRK+EDA RVVEST  HFG++DILVNAAAGNF
Sbjct: 42  MGRRKQVLQSAVSVLQSLVIPAVGFEGDVRKQEDAARVVESTFKHFGRIDILVNAAAGNF 101

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
           LV AEDLS NGFRTV++IDSVGTF MCHEALKYLKKGG G+++SSSGG IINISATLHYT
Sbjct: 102 LVSAEDLSSNGFRTVLDIDSVGTFTMCHEALKYLKKGGEGRSNSSSGGSIINISATLHYT 161

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
           A+WYQIHVSAAKAAVD+ TR+LALEWGTDY IRVNGIAPGPI  T G+SKLAP+EI SKA
Sbjct: 162 ASWYQIHVSAAKAAVDATTRNLALEWGTDYDIRVNGIAPGPISGTPGMSKLAPDEISSKA 221

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRA 240
            DYM  YK GEKWDIAMAAL+LASDAGK+VNG+T+IVDGG WLS PR L KEAV Q+SR+
Sbjct: 222 RDYMPLYKLGEKWDIAMAALFLASDAGKFVNGDTMIVDGGLWLSRPRHLEKEAVKQVSRS 281

Query: 241 VERKSRDSPVGIPKSRL 257
           VE++SR+ PVG+PKS+L
Sbjct: 282 VEKRSRNVPVGVPKSKL 298

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358249176|ref|NP_001240261.1| uncharacterized protein LOC100800885 [Glycine max] gi|255644975|gb|ACU22987.1| unknown [Glycine max]

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 199/257 (77%), Positives = 227/257 (88%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
           MGRRK VL+SAV+ L SL IPA+G EGDVRK+EDAVRVVEST  HFG++DILVNAAAGNF
Sbjct: 42  MGRRKQVLQSAVSVLQSLAIPAVGFEGDVRKQEDAVRVVESTFKHFGRIDILVNAAAGNF 101

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
           LV AEDLSPNGFRTV++IDSVGTF MCHEALKYLKKGG G+++SSSGG IINISATLHYT
Sbjct: 102 LVSAEDLSPNGFRTVLDIDSVGTFTMCHEALKYLKKGGEGRSNSSSGGSIINISATLHYT 161

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
           A+WYQIHVSAAKAAVD+ TR+LALEWGTDY IRVNGIAPGPI DT G+SKLAP+EI SKA
Sbjct: 162 ASWYQIHVSAAKAAVDATTRNLALEWGTDYDIRVNGIAPGPISDTPGMSKLAPDEISSKA 221

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRA 240
            DYM  YK GEKWDIAMAAL+L SDAGK++NG+ +IVDGG WLS PR L KEAV Q+SR+
Sbjct: 222 RDYMPLYKLGEKWDIAMAALFLVSDAGKFINGDIMIVDGGLWLSRPRHLAKEAVKQVSRS 281

Query: 241 VERKSRDSPVGIPKSRL 257
           VE +SR++ V +PKS+L
Sbjct: 282 VENRSRNASVSVPKSKL 298

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444144|ref|XP_004139835.1| PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase-like [Cucumis sativus]

 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 197/257 (76%), Positives = 219/257 (85%), Gaps = 1/257 (0%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
           MGRRK VL SAVAAL SLGI A G EGDVRK+EDA  VV+ST N  G LDILVNAAAGNF
Sbjct: 42  MGRRKQVLDSAVAALRSLGISAFGFEGDVRKQEDASSVVDSTFNKLGSLDILVNAAAGNF 101

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
           LV AEDLSPNGFRTV++IDSVGTF MCH+ALKYLKKGG G+ +S +GG IINISATLHYT
Sbjct: 102 LVSAEDLSPNGFRTVMDIDSVGTFTMCHQALKYLKKGGPGR-NSLTGGTIINISATLHYT 160

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
           A WYQIHVSAAKAAVD+ITR+LALEWG D+ IRVNGIAPGPI+ T G+SKLAPEEI SK 
Sbjct: 161 AAWYQIHVSAAKAAVDAITRNLALEWGADHDIRVNGIAPGPIQGTPGLSKLAPEEINSKI 220

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRA 240
            + M  Y+ GEKWDIAMAALYLASDAGKYVNG T+I DGG WLS+PR LPK+AV QLSR 
Sbjct: 221 REDMPLYRIGEKWDIAMAALYLASDAGKYVNGTTIIADGGMWLSSPRRLPKDAVKQLSRV 280

Query: 241 VERKSRDSPVGIPKSRL 257
           VE++SR+ PVG PKS+L
Sbjct: 281 VEKRSRNLPVGAPKSKL 297

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297834090|ref|XP_002884927.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] gi|297330767|gb|EFH61186.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 196/257 (76%), Positives = 220/257 (85%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
           MGRRK VL  AV+AL SLGI AIGLEGDVRK+EDA RVVE+T  HFG++DILVNAAAGNF
Sbjct: 42  MGRRKQVLDDAVSALRSLGIQAIGLEGDVRKQEDARRVVEATYQHFGRIDILVNAAAGNF 101

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
           L  AEDLSPNGFRTV++ID+VGTF MCH ALKYLKKGG G+ SS+ GG IINISATLHYT
Sbjct: 102 LAAAEDLSPNGFRTVLDIDAVGTFNMCHAALKYLKKGGPGRDSSTGGGSIINISATLHYT 161

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
           A+WYQIHVSAAKAAVD+ TR+LALEWGTDY IRVNGIAPGPI  T G+SKL PEEI +K 
Sbjct: 162 ASWYQIHVSAAKAAVDATTRNLALEWGTDYDIRVNGIAPGPIGGTPGMSKLVPEEIENKT 221

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRA 240
            +YM  YK GEKWDIAMAALYL+ D+GKYVNG T++VDGG WLS PR LPKEAV QLSRA
Sbjct: 222 REYMPLYKLGEKWDIAMAALYLSCDSGKYVNGLTVVVDGGLWLSKPRHLPKEAVKQLSRA 281

Query: 241 VERKSRDSPVGIPKSRL 257
           VE++SR  PVG+P S+L
Sbjct: 282 VEKRSRAKPVGLPTSKL 298

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115460520|ref|NP_001053860.1| Os04g0614000 [Oryza sativa Japonica Group] gi|38347363|emb|CAE05217.2| OSJNBa0070C17.24 [Oryza sativa Japonica Group] gi|113565431|dbj|BAF15774.1| Os04g0614000 [Oryza sativa Japonica Group] gi|116309871|emb|CAH66908.1| OSIGBa0126B18.1 [Oryza sativa Indica Group] gi|125549710|gb|EAY95532.1| hypothetical protein OsI_17378 [Oryza sativa Indica Group]

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 183/257 (71%), Positives = 212/257 (82%), Gaps = 1/257 (0%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
           MGRR+ VL  AVAAL S G+ A+G EGDVRK+EDA RVV +T+ HFGKLDILVN AAGNF
Sbjct: 44  MGRRREVLDKAVAALRSHGLRAVGFEGDVRKQEDAARVVAATVQHFGKLDILVNGAAGNF 103

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
           L   EDL+P GFRTV++ID+VGT+ MC+EALKYLKKGG G+  S+ GG+IINISATLHYT
Sbjct: 104 LASPEDLTPKGFRTVVDIDTVGTYTMCYEALKYLKKGGPGKGPST-GGVIINISATLHYT 162

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
           A WYQIHVSAAKA VDSITRSLALEWGTDY IRVNGIAPGPI+ T G+ KLAPEE+   +
Sbjct: 163 AAWYQIHVSAAKAGVDSITRSLALEWGTDYDIRVNGIAPGPIEGTPGMRKLAPEEMAKGS 222

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRA 240
            + M  +K GEKWDIAMAALYLASDAGKYVNG T++VDGG WLS PR +PKE V +LS+ 
Sbjct: 223 REIMPLFKLGEKWDIAMAALYLASDAGKYVNGTTVVVDGGLWLSRPRHIPKEEVKELSKV 282

Query: 241 VERKSRDSPVGIPKSRL 257
           VE+K R S VG+P S+L
Sbjct: 283 VEKKVRASGVGVPSSKL 299

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	257
TAIR|locus:2087770	298	SDRB "short-chain dehydrogenas	1.0	0.862	0.719	1.4e-94
TAIR|locus:3437247	156	AT2G07640 [Arabidopsis thalian	0.571	0.942	0.639	3.4e-45
UNIPROTKB|F1NG68	308	LOC100858408 "Uncharacterized	0.832	0.694	0.405	1.9e-35
UNIPROTKB|F1PEZ3	266	DECR2 "Uncharacterized protein	0.828	0.800	0.404	1.5e-33
RGD|71002	292	Decr2 "2,4-dienoyl CoA reducta	0.828	0.729	0.395	3.2e-33
MGI|MGI:1347059	292	Decr2 "2-4-dienoyl-Coenzyme A	0.824	0.726	0.391	4.1e-33
ZFIN|ZDB-GENE-040426-2612	300	decr2 "2,4-dienoyl CoA reducta	0.758	0.65	0.395	1.1e-32
UNIPROTKB|Q5RBV3	292	DECR2 "Peroxisomal 2,4-dienoyl	0.832	0.732	0.397	1.4e-32
UNIPROTKB|F1RGV4	320	DECR2 "Uncharacterized protein	0.832	0.668	0.397	4.7e-32
TIGR_CMR|BA_4204	254	BA_4204 "oxidoreductase, short	0.828	0.838	0.391	7.7e-32

TAIR|locus:2087770 SDRB "short-chain dehydrogenase-reductase B" [Arabidopsis thaliana (taxid:3702)]

 Score = 941 (336.3 bits), Expect = 1.4e-94, P = 1.4e-94
 Identities = 185/257 (71%), Positives = 206/257 (80%)

Query:     1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
             MGRRK VL  AV+AL SLGI AIGLEGDVRK+EDA RVVE+T  HFGKLDILVNAAAGNF
Sbjct:    42 MGRRKQVLDDAVSALRSLGIQAIGLEGDVRKQEDARRVVEATFQHFGKLDILVNAAAGNF 101

Query:    61 LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYT 120
             L  AEDLSPNGFRTV++ID+VGTF MCH ALKYLKK                  ATLHYT
Sbjct:   102 LAAAEDLSPNGFRTVLDIDAVGTFNMCHAALKYLKKGAPGRDSSSGGGSIINISATLHYT 161

Query:   121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
             A+WYQIHVSAAKAAVD+ TR+LALEWGTDY IRVNGIAPGPI  T G+SKL PEEI +K 
Sbjct:   162 ASWYQIHVSAAKAAVDATTRNLALEWGTDYDIRVNGIAPGPIGGTPGMSKLVPEEIENKT 221

Query:   181 TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRA 240
              +YM  YK GEKWDIAMAALYL+ D+GKYV+G T++VDGG WLS PR LPKEAV QLSRA
Sbjct:   222 REYMPLYKVGEKWDIAMAALYLSCDSGKYVSGLTMVVDGGLWLSKPRHLPKEAVKQLSRA 281

Query:   241 VERKSRDSPVGIPKSRL 257
             VE++SR  PVG+P S+L
Sbjct:   282 VEKRSRAKPVGLPTSKL 298

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005777 "peroxisome" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0006635 "fatty acid beta-oxidation" evidence=RCA

TAIR|locus:3437247 AT2G07640 [Arabidopsis thaliana (taxid:3702)]

 Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
 Identities = 94/147 (63%), Positives = 106/147 (72%)

Query:    86 MCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALE 145
             MCH ALKYLKK                  ATLHYTA+ YQIHVSAAK AVD+ TR+LALE
Sbjct:     1 MCHAALKYLKKVAPGRDSSSGGGSIINISATLHYTASRYQIHVSAAKVAVDATTRNLALE 60

Query:   146 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 205
             WGTDY IRVNGIA GPI  T G+SKL PEEI +K  +YM  YK GEKWDIAMAALYL+ D
Sbjct:    61 WGTDYDIRVNGIATGPIGGTPGMSKLVPEEIENKTREYMPLYKLGEKWDIAMAALYLSCD 120

Query:   206 AGKYVNGNTLIVDGGNWLSNPRDLPKE 232
             +GKY++G T++VDGG  LS PR L KE
Sbjct:   121 SGKYMSGLTMVVDGGLCLSKPRHLAKE 147

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|F1NG68 LOC100858408 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
 Identities = 92/227 (40%), Positives = 132/227 (58%)

Query:     2 GR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
             GR ++ V++++   + + G   + L  DVR+ +  V  V+ T+  F ++DILVN AAGNF
Sbjct:    73 GRNQQRVVQASKKLVVATGQQCLPLSIDVRQPQTIVAAVDETLKQFKQIDILVNGAAGNF 132

Query:    61 LVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL-KYLKKXXXXXXXXXXXXXXXXXXATLHY 119
             L PA  LS N F+TV++ID++GTF        KY +                   ATL Y
Sbjct:   133 LCPASALSFNAFKTVMDIDTLGTFNTSKVLFEKYFRDHGGVIINIT---------ATLSY 183

Query:   120 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR-S 178
                  Q+H  +AKAA+D++TR LA+EWG +  IRVN +APGPI  T G  +L  +  + S
Sbjct:   184 RGQALQVHAGSAKAAIDAMTRHLAVEWGPNN-IRVNSLAPGPITGTEGFRRLGGKFAKDS 242

Query:   179 KATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSN 225
             K  D +   + G K +IA +ALYLAS    YV G TL+VDGG+WL++
Sbjct:   243 KQFDTIPLQRAGNKTEIAHSALYLASPLSSYVTGTTLVVDGGSWLTS 289

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005102 "receptor binding" evidence=IEA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=IEA

GO:0008670 "2,4-dienoyl-CoA reductase (NADPH) activity" evidence=IEA

GO:0019166 "trans-2-enoyl-CoA reductase (NADPH) activity" evidence=IEA

UNIPROTKB|F1PEZ3 DECR2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
 Identities = 91/225 (40%), Positives = 121/225 (53%)

Query:     7 VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAED 66
             V ++A     + G   + L  DVR        V+  +  FGK+DILVN AAGNFL PA  
Sbjct:    40 VSKAARKLAAATGQRCLPLSLDVRAFPAITAAVDQALKEFGKIDILVNCAAGNFLCPASA 99

Query:    67 LSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQI 126
             LS N F+TV++IDS+GTF M    + Y K                   ATL       Q+
Sbjct:   100 LSFNAFKTVMDIDSLGTFNMSR--VLYEK------FFRDHGGVIVNITATLGTRGQVLQV 151

Query:   127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE--IRSKATDYM 184
             H  +AKAAVD++TR LA+EWG    IR+N +APGPI  T G  +L   +  + +K  D +
Sbjct:   152 HAGSAKAAVDAMTRHLAVEWGPQN-IRINSLAPGPISGTEGFRRLGGHQASVSTKVLD-I 209

Query:   185 AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDL 229
                + G K ++A  ALYLAS    Y+ G  L+VDGG WL+ P DL
Sbjct:   210 PLQRLGNKTEVAHGALYLASPLTSYMTGAVLVVDGGAWLTFPNDL 254

GO:0019166 "trans-2-enoyl-CoA reductase (NADPH) activity" evidence=IEA

GO:0008670 "2,4-dienoyl-CoA reductase (NADPH) activity" evidence=IEA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=IEA

GO:0005102 "receptor binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

RGD|71002 Decr2 "2,4-dienoyl CoA reductase 2, peroxisomal" [Rattus norvegicus (taxid:10116)]

 Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
 Identities = 89/225 (39%), Positives = 125/225 (55%)

Query:     7 VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAED 66
             V  +A   + + G   + L  DVR     +  V+  +  FGK+DIL+N AAGNFL PA  
Sbjct:    65 VSEAAKKLVAATGKRCLPLSMDVRVPPAVMAAVDQALKEFGKIDILINCAAGNFLCPASA 124

Query:    67 LSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQI 126
             LS N F+TV++ID++GTF +    + Y K                   ATL       Q+
Sbjct:   125 LSFNAFKTVVDIDTLGTFNVSR--VLYEK------FFRDHGGVIVNITATLSMRGQVLQL 176

Query:   127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA 186
             H  AAKAAVD++TR LA+EWG    IRVN +APG I  T G+ +L   +  SK   Y+++
Sbjct:   177 HAGAAKAAVDAMTRHLAVEWGPQN-IRVNSLAPGAISGTEGLRRLGGPKASSKFK-YLSS 234

Query:   187 Y--KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDL 229
                + G K +IA + LYLAS    YV+G  L+VDGG+W++ P D+
Sbjct:   235 PIPRLGTKTEIAHSVLYLASPLASYVSGIVLVVDGGSWMTLPNDI 279

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003735 "structural constituent of ribosome" evidence=IEA

GO:0004550 "nucleoside diphosphate kinase activity" evidence=IEA

GO:0005102 "receptor binding" evidence=IEA;ISO

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005777 "peroxisome" evidence=IDA

GO:0005778 "peroxisomal membrane" evidence=IDA

GO:0005840 "ribosome" evidence=IEA

GO:0006183 "GTP biosynthetic process" evidence=IEA

GO:0006228 "UTP biosynthetic process" evidence=IEA

GO:0006241 "CTP biosynthetic process" evidence=IEA

GO:0006412 "translation" evidence=IEA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=IEA;ISO

GO:0008670 "2,4-dienoyl-CoA reductase (NADPH) activity" evidence=ISO;IDA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0019166 "trans-2-enoyl-CoA reductase (NADPH) activity" evidence=IEA;ISO

MGI|MGI:1347059 Decr2 "2-4-dienoyl-Coenzyme A reductase 2, peroxisomal" [Mus musculus (taxid:10090)]

 Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
 Identities = 88/225 (39%), Positives = 122/225 (54%)

Query:     6 TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAE 65
             T  +  VAA     +P   L  DVR   + +  V+  +  FGK++IL+N AAGNFL PA 
Sbjct:    67 TAAKKLVAATGKRCLP---LSMDVRVPPEVMTAVDQALQEFGKINILINCAAGNFLCPAS 123

Query:    66 DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQ 125
              LS N F+TV++ID++GTF +   ++ Y K                   ATL       Q
Sbjct:   124 ALSFNAFKTVVDIDTIGTFNV--SSVLYKK------FFRDHGGVIVNITATLSMRGQVLQ 175

Query:   126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA 185
             +H  AAKAAVD++TR LA+EWG    IRVN +APG I  T G+ +L      SK   +  
Sbjct:   176 LHAGAAKAAVDAMTRHLAVEWGPQN-IRVNSLAPGAISGTEGLRRLRGSNASSKLKHFSN 234

Query:   186 AY-KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDL 229
                + G K +IA + LYLAS    YV+G  L+VDGG+W++ P  +
Sbjct:   235 PIPRLGTKTEIAHSVLYLASPLASYVSGIVLVVDGGSWMTFPNGI 279

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005102 "receptor binding" evidence=ISO

GO:0005777 "peroxisome" evidence=ISO

GO:0005778 "peroxisomal membrane" evidence=ISO

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=ISO;ISS

GO:0008670 "2,4-dienoyl-CoA reductase (NADPH) activity" evidence=ISO;ISS

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0019166 "trans-2-enoyl-CoA reductase (NADPH) activity" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=IEA;ISO

ZFIN|ZDB-GENE-040426-2612 decr2 "2,4-dienoyl CoA reductase 2, peroxisomal" [Danio rerio (taxid:7955)]

 Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
 Identities = 81/205 (39%), Positives = 113/205 (55%)

Query:    28 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
             DVR+ E  +  V+ T+  FG++DIL+N AAGNFL PA  LS N F+TV+EID++GTF   
Sbjct:    93 DVRQPETILAAVDETLKTFGRVDILINNAAGNFLCPATSLSFNAFKTVMEIDTMGTF--- 149

Query:    88 HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 147
                     K                  ATL Y     Q+H  +AKAA D++TR LA+EWG
Sbjct:   150 -----NTSKVIYDKWFKDHGGSIVNISATLGYRGQALQVHAGSAKAANDAMTRHLAVEWG 204

Query:   148 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY-MAAYKFGEKWDIAMAALYLASDA 206
                 +RVN +APGPI  T G  +L      +    + +   + G K ++A A L+LAS A
Sbjct:   205 PS-GVRVNTVAPGPISGTEGYRRLGGSHAETAGAFHSIPLQRAGNKTEMAHAVLFLASRA 263

Query:   207 GKYVNGNTLIVDGGNWLSNPRDLPK 231
               YV G+ L+ DGG WL++  D+ +
Sbjct:   264 SSYVTGSVLVADGGAWLTSANDVER 288

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0008670 "2,4-dienoyl-CoA reductase (NADPH) activity" evidence=IEA;ISS

GO:0005777 "peroxisome" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

UNIPROTKB|Q5RBV3 DECR2 "Peroxisomal 2,4-dienoyl-CoA reductase" [Pongo abelii (taxid:9601)]

 Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
 Identities = 89/224 (39%), Positives = 118/224 (52%)

Query:     7 VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAED 66
             VL +A     + G   + L  DVR     V  V+  +  FG++DIL+N AAGNFL PA  
Sbjct:    65 VLTAARKLAGATGRRCLPLSMDVRAPPAIVAAVDQALKEFGRIDILINCAAGNFLCPAGA 124

Query:    67 LSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQI 126
             LS N F+TV++ID+ GTF +    + Y K                   ATL       Q+
Sbjct:   125 LSFNAFKTVMDIDTSGTFNVSR--VLYEK------FFRDHGGVIVNITATLGNRGQALQV 176

Query:   127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMA 185
             H  +AKAAVD++TR LA+EWG    IRVN +APGPI  T G+ +L  P+   S       
Sbjct:   177 HAGSAKAAVDAMTRHLAVEWGPQN-IRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASP 235

Query:   186 AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDL 229
               + G K +IA + LYLAS    YV G  L+ DGG WL+ P D+
Sbjct:   236 LQRLGNKTEIAHSVLYLASPLASYVTGAVLVADGGAWLTFPNDV 279

GO:0008670 "2,4-dienoyl-CoA reductase (NADPH) activity" evidence=ISS

UNIPROTKB|F1RGV4 DECR2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
 Identities = 91/229 (39%), Positives = 118/229 (51%)

Query:     3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
             R  T  R   AA     +P   L  DVR     V  VE  +   GK+DILVN AAGNFL 
Sbjct:    92 RVSTAARKLAAATGQTCLP---LSLDVRVPATIVAAVEQALQGLGKVDILVNCAAGNFLC 148

Query:    63 PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTAT 122
             PA  LSPN F+ V++ D++GTF MC   + Y K                   ATL     
Sbjct:   149 PASALSPNAFKAVLDTDTLGTFNMCR--VLYEK------FFRDHGGVIVNITATLGTRGQ 200

Query:   123 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD 182
               Q+H  +AKAAVD++TR LA+EW     IRVN +A GPI  T G  +L         T+
Sbjct:   201 VLQVHAGSAKAAVDAMTRHLAVEWAPQN-IRVNSLALGPISGTEGFRRLGGLNA-GLHTE 258

Query:   183 YMAA--YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDL 229
              +A    + G K ++A +AL+LAS    YV G  L+VDGG W++ P D+
Sbjct:   259 TLAGPQQRLGNKTEVAHSALFLASPLASYVTGAVLVVDGGTWMTFPNDV 307

GO:0019166 "trans-2-enoyl-CoA reductase (NADPH) activity" evidence=IEA

GO:0008670 "2,4-dienoyl-CoA reductase (NADPH) activity" evidence=IEA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=IEA

GO:0005102 "receptor binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

TIGR_CMR|BA_4204 BA_4204 "oxidoreductase, short chain dehydrogenase/reductase family" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
 Identities = 88/225 (39%), Positives = 122/225 (54%)

Query:     2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
             GR K  L  A   +       + ++ DVR  +D  +++E     FG++DIL+N AAGNF+
Sbjct:    34 GRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFI 93

Query:    62 VPAEDLSPNGFRTVIEIDSVGTFIMCHEAL-KY-LKKXXXXXXXXXXXXXXXXXXATLHY 119
              PAEDLS NG+ +VI I   GTF  C +A+ KY ++K                  AT  +
Sbjct:    94 CPAEDLSVNGWNSVINIVLNGTFY-CSQAIGKYWIEKGIKGNIINMV--------ATYAW 144

Query:   120 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRS 178
              A    IH +AAKA V ++T++LA+EWG  Y IRVN IAPGPI+ T G  KL   EE+  
Sbjct:   145 DAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAK 204

Query:   179 KATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 223
             +    +   + G   +IA  A YL SD   Y+NG  + +DGG  L
Sbjct:   205 RTIQSVPLGRLGTPEEIAGLAYYLCSDEAAYINGTCMTMDGGQHL 249

GO:0008152 "metabolic process" evidence=ISS

GO:0016491 "oxidoreductase activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LTV6	DECR2_ARATH	1, ., 3, ., 1, ., 3, 4	0.7665	1.0	0.8624	yes	no
O34717	FADH_BACSU	1, ., 3, ., 1, ., 3, 4	0.3849	0.8443	0.8543	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.3.1.34	0.991
3rd Layer	1.3.1	0.976

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00030139001 SubName- Full=Putative uncharacterized protein (Chromosome chr1 scaffold_5, whole genome shotgun sequence); (297 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	257
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	4e-93
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	6e-64
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	2e-59
cd05233	234	cd05233, SDR_c, classical (c) SDRs	3e-46
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-41
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	4e-41
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	4e-41
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-40
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	9e-38
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	4e-36
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	7e-36
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-35
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	5e-35
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	8e-35
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-34
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	2e-33
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-33
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	4e-33
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	1e-32
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	3e-31
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	1e-30
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	1e-29
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-29
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	2e-28
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	4e-28
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	5e-28
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	7e-28
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	7e-28
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	8e-28
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	9e-28
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	9e-28
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	2e-27
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	2e-27
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	1e-26
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	2e-26
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	3e-26
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	3e-26
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	4e-26
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	5e-26
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	5e-26
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	6e-26
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	8e-26
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	1e-25
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	1e-25
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	2e-25
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	2e-25
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	6e-25
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	7e-25
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	1e-24
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	3e-24
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	5e-24
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	6e-24
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	7e-24
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	2e-23
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	3e-23
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	4e-23
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	8e-23
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	2e-22
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	3e-22
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	6e-22
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	6e-22
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-22
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	9e-22
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	1e-21
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	1e-21
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	2e-21
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	3e-21
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	5e-21
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	6e-21
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	8e-21
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	2e-20
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	4e-20
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	4e-20
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	5e-20
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	5e-20
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	9e-20
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	2e-19
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	3e-19
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-19
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	6e-19
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	9e-19
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	1e-18
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	1e-18
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	1e-18
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	3e-18
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	3e-18
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	6e-18
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	7e-18
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	8e-18
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	1e-17
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	1e-17
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	1e-17
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	2e-17
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	2e-17
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	4e-17
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	1e-16
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	1e-16
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	1e-16
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	1e-16
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	3e-16
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	3e-16
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	3e-16
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	4e-16
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	7e-16
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	7e-16
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	7e-16
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	1e-15
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	1e-15
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	1e-15
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	2e-15
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	2e-15
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	5e-15
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	5e-15
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	6e-15
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	1e-14
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	2e-14
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	2e-14
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	2e-14
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	3e-14
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	5e-14
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	9e-14
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	1e-13
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	3e-13
PRK07533	258	PRK07533, PRK07533, enoyl-(acyl carrier protein) r	4e-13
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	4e-13
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	4e-13
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	6e-13
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	7e-13
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	7e-13
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	8e-13
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	8e-13
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	2e-12
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	2e-12
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	2e-12
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	3e-12
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	3e-12
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-12
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	3e-12
cd05334	221	cd05334, DHPR_SDR_c_like, dihydropteridine reducta	3e-12
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	4e-12
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	5e-12
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	7e-12
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	7e-12
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-11
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	2e-11
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	3e-11
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	3e-11
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	3e-11
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	3e-11
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	4e-11
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	4e-11
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	9e-11
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	1e-10
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	1e-10
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	2e-10
PLN02730	303	PLN02730, PLN02730, enoyl-[acyl-carrier-protein] r	3e-10
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	4e-10
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	5e-10
PRK07370	258	PRK07370, PRK07370, enoyl-(acyl carrier protein) r	5e-10
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	6e-10
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	7e-10
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	7e-10
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-09
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	1e-09
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-09
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	1e-09
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	1e-09
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-09
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	2e-09
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	2e-09
PRK06300	299	PRK06300, PRK06300, enoyl-(acyl carrier protein) r	2e-09
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	3e-09
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	4e-09
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	4e-09
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	6e-09
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	7e-09
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	1e-08
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	2e-08
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	4e-08
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	6e-08
PRK08415	274	PRK08415, PRK08415, enoyl-(acyl carrier protein) r	7e-08
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	1e-07
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	1e-07
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	2e-07
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	3e-07
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	3e-07
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	4e-07
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	4e-07
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	5e-07
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	5e-07
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	6e-07
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	7e-07
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	9e-07
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	9e-07
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	1e-06
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	1e-06
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	2e-06
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	5e-06
PRK08159	272	PRK08159, PRK08159, enoyl-(acyl carrier protein) r	5e-06
PRK08594	257	PRK08594, PRK08594, enoyl-(acyl carrier protein) r	8e-06
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	8e-06
PRK12428	241	PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro	9e-06
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	1e-05
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	2e-05
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	4e-05
cd05361	242	cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de	4e-05
PRK06505	271	PRK06505, PRK06505, enoyl-(acyl carrier protein) r	6e-05
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	6e-05
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	9e-05
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	2e-04
PRK06483	236	PRK06483, PRK06483, dihydromonapterin reductase; P	2e-04
PRK06079	252	PRK06079, PRK06079, enoyl-(acyl carrier protein) r	3e-04
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	3e-04
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	7e-04
PRK08690	261	PRK08690, PRK08690, enoyl-(acyl carrier protein) r	7e-04
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	0.001
PRK06603	260	PRK06603, PRK06603, enoyl-(acyl carrier protein) r	0.002
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	0.002
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	0.002
PRK07889	256	PRK07889, PRK07889, enoyl-(acyl carrier protein) r	0.003
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	0.003
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	0.003
PRK06997	260	PRK06997, PRK06997, enoyl-(acyl carrier protein) r	0.004

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score =  274 bits (702), Expect = 4e-93
 Identities = 109/225 (48%), Positives = 138/225 (61%), Gaps = 10/225 (4%)

Query: 1   MGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN 59
            GR+  VL +A   + S  G  A  ++ DVR  E     V+ T+  FGK+DIL+N AAGN
Sbjct: 33  AGRKPEVLEAAAEEISSATGGRAHPIQCDVRDPEAVEAAVDETLKEFGKIDILINNAAGN 92

Query: 60  FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 119
           FL PAE LSPNGF+TVI+ID  GTF       K L +          GG I+NISAT  Y
Sbjct: 93  FLAPAESLSPNGFKTVIDIDLNGTFNTTKAVGKRLIEAKH-------GGSILNISATYAY 145

Query: 120 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE-IRS 178
           T + +Q+H +AAKA VD++TRSLA+EWG  Y IRVN IAPGPI  T G+ +LAP      
Sbjct: 146 TGSPFQVHSAAAKAGVDALTRSLAVEWG-PYGIRVNAIAPGPIPTTEGMERLAPSGKSEK 204

Query: 179 KATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 223
           K  + +   + G   +IA  AL+L SDA  Y+NG TL+VDGG WL
Sbjct: 205 KMIERVPLGRLGTPEEIANLALFLLSDAASYINGTTLVVDGGQWL 249

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score =  200 bits (510), Expect = 6e-64
 Identities = 94/221 (42%), Positives = 125/221 (56%), Gaps = 13/221 (5%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVR-VVESTINHFGKLDILVNAAAGNF 60
            R +  + +AVA L   G   +G+  DVR    AV        + FG +D+LV+ AAGNF
Sbjct: 40  SRSQEKVDAAVAQLQQAGPEGLGVSADVRD-YAAVEAAFAQIADEFGPIDVLVSGAAGNF 98

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
             PA  +S NGF+TV++ID +GTF +   A   L++          G  II ISA   + 
Sbjct: 99  PAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRR---------PGASIIQISAPQAFV 149

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSK 179
               Q HV AAKA VD +TR+LALEWG +  IRVN I PGPI  T G+++LAP  E+++ 
Sbjct: 150 PMPMQAHVCAAKAGVDMLTRTLALEWGPE-GIRVNSIVPGPIAGTEGMARLAPSPELQAA 208

Query: 180 ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
               +   + G K DIA AAL+LASD   Y+ G  L VDGG
Sbjct: 209 VAQSVPLKRNGTKQDIANAALFLASDMASYITGVVLPVDGG 249

Length = 264

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score =  188 bits (479), Expect = 2e-59
 Identities = 93/224 (41%), Positives = 125/224 (55%), Gaps = 10/224 (4%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
           GR K  L  A   +       + ++ DVR  ED  ++VE     FG++D L+N AAGNF+
Sbjct: 32  GRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDALINNAAGNFI 91

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY-LKKGGRGQASSSSGGIIINISATLHYT 120
            PAEDLS NG+ +VI+I   GTF       KY ++KG +G         IIN+ AT  + 
Sbjct: 92  CPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGN--------IINMVATYAWD 143

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSK 179
           A    IH +AAKA V ++TR+LA+EWG  Y IRVN IAPGPI+ T G  KL   EE   +
Sbjct: 144 AGPGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKR 203

Query: 180 ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 223
               +   + G   +IA  A +L SD   Y+NG  + +DGG WL
Sbjct: 204 TIQSVPLGRLGTPEEIAGLAYFLLSDEAAYINGTCITMDGGQWL 247

Length = 252

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  153 bits (390), Expect = 3e-46
 Identities = 77/217 (35%), Positives = 118/217 (54%), Gaps = 11/217 (5%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R +  L   +AA+ +LG  A+ ++ DV   ED   +VE  +  FG+LDILVN A     
Sbjct: 29  DRNEEALA-ELAAIEALGGNAVAVQADVSDEEDVEALVEEALEEFGRLDILVNNAGIARP 87

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            P E+L+   +  V++++  G F++   AL ++KK G        GG I+NIS+      
Sbjct: 88  GPLEELTDEDWDRVLDVNLTGVFLLTRAALPHMKKQG--------GGRIVNISSVAGLRP 139

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
              Q   +A+KAA++ +TRSLALE    Y IRVN +APG + DT  ++KL PEE   +  
Sbjct: 140 LPGQAAYAASKAALEGLTRSLALELA-PYGIRVNAVAPGLV-DTPMLAKLGPEEAEKELA 197

Query: 182 DYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVD 218
             +   + G   ++A A ++LASD   Y+ G  + VD
Sbjct: 198 AAIPLGRLGTPEEVAEAVVFLASDEASYITGQVIPVD 234

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  142 bits (361), Expect = 1e-41
 Identities = 66/210 (31%), Positives = 99/210 (47%), Gaps = 11/210 (5%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
            VA + +LG  A+ ++GDV   E   R V+     FG +DILVN A          +   
Sbjct: 46  LVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEE 105

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            +  VI+ +  G F +     + + K           G IINIS+ +       Q + +A
Sbjct: 106 DWDRVIDTNLTGVFNLTKAVARPMMKQR--------SGRIINISSVVGLMGNPGQANYAA 157

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 190
           +KA V   T+SLA E  +   I VN +APG I +T     L PE+++      +   + G
Sbjct: 158 SKAGVIGFTKSLARELAS-RGITVNAVAPGFI-ETDMTDAL-PEDVKEAILAQIPLGRLG 214

Query: 191 EKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           +  +IA A  +LASD   Y+ G TL V+GG
Sbjct: 215 QPEEIASAVAFLASDEAAYITGQTLHVNGG 244

Length = 248

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score =  141 bits (357), Expect = 4e-41
 Identities = 72/209 (34%), Positives = 105/209 (50%), Gaps = 8/209 (3%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
           V  + ++G  AI ++ DV K ED V + +S I  FG LDILVN A       + +++   
Sbjct: 45  VEEIKAVGGKAIAVQADVSKEEDVVALFQSAIKEFGTLDILVNNAGLQGDASSHEMTLED 104

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 131
           +  VI+++  G F+   EA+K  +K       S   G IIN+S+          ++ +A+
Sbjct: 105 WNKVIDVNLTGQFLCAREAIKRFRK-------SKIKGKIINMSSVHEKIPWPGHVNYAAS 157

Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 191
           K  V  +T++LA E+     IRVN IAPG I            E R+     +   + GE
Sbjct: 158 KGGVKMMTKTLAQEYA-PKGIRVNAIAPGAINTPINAEAWDDPEQRADLLSLIPMGRIGE 216

Query: 192 KWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             +IA AA +LASD   YV G TL VDGG
Sbjct: 217 PEEIAAAAAWLASDEASYVTGTTLFVDGG 245

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score =  141 bits (357), Expect = 4e-41
 Identities = 78/224 (34%), Positives = 109/224 (48%), Gaps = 18/224 (8%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
           R+   L  A A L +LGI A+ +  DV    D  R+ E T+  FG +DILVN A   +  
Sbjct: 44  RKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHVDILVNNAGATWGA 103

Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS--ATL--H 118
           PAED     +  V+ ++  G F++     K               G IIN++  A L  +
Sbjct: 104 PAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRG-------YGRIINVASVAGLGGN 156

Query: 119 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG--PIKDTAGVSKLAPEEI 176
                  I  + +K AV + TR+LA EWG  + IRVN IAPG  P K T G  +   E++
Sbjct: 157 PPEVMDTIAYNTSKGAVINFTRALAAEWG-PHGIRVNAIAPGFFPTKMTRGTLERLGEDL 215

Query: 177 RSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            +         + G+  D+  AAL LASDA K++ G  L VDGG
Sbjct: 216 LAHT----PLGRLGDDEDLKGAALLLASDASKHITGQILAVDGG 255

Length = 259

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  138 bits (351), Expect = 3e-40
 Identities = 70/219 (31%), Positives = 105/219 (47%), Gaps = 11/219 (5%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
              +    +  A L + G  A  L  DV        ++E+ +  FG LDILVN A     
Sbjct: 36  DSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGALDILVNNAGITRD 95

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
                +S   +  VI+++  GTF +   AL  + K   G+        I+NIS+    T 
Sbjct: 96  ALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGR--------IVNISSVSGVTG 147

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
              Q + SAAKA V   T++LALE  +   I VN +APG I DT     L PEE++++  
Sbjct: 148 NPGQTNYSAAKAGVIGFTKALALELAS-RGITVNAVAPGFI-DTDMTEGL-PEEVKAEIL 204

Query: 182 DYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             +   + G+  ++A A  +LASDA  Y+ G  + V+GG
Sbjct: 205 KEIPLGRLGQPEEVANAVAFLASDAASYITGQVIPVNGG 243

Length = 246

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  132 bits (335), Expect = 9e-38
 Identities = 67/222 (30%), Positives = 97/222 (43%), Gaps = 11/222 (4%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
           +        +    + + G  A   + DVR R      V + +  FG+LDILV  A    
Sbjct: 36  VDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRLDILVANAGIFP 95

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI-SATLHY 119
           L P  ++    +  VI+++  GTF++   AL  L + G        GG I+   S     
Sbjct: 96  LTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG--------GGRIVLTSSVAGPR 147

Query: 120 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 179
                  H +A+KA +   TR+LALE      I VN + PG + DT     L   +    
Sbjct: 148 VGYPGLAHYAASKAGLVGFTRALALELAA-RNITVNSVHPGGV-DTPMAGNLGDAQWAEA 205

Query: 180 ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN 221
               +   + GE  DIA A L+LASD  +Y+ G TL VDGG 
Sbjct: 206 IAAAIPLGRLGEPEDIAAAVLFLASDEARYITGQTLPVDGGA 247

Length = 251

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  128 bits (323), Expect = 4e-36
 Identities = 71/224 (31%), Positives = 108/224 (48%), Gaps = 19/224 (8%)

Query: 3   RRKTVLRSAVAALHSLGIP-AIGLEGDVRKREDAVR-VVESTINHFGKLDILV-NAAAGN 59
             +    +  AA+   G   A  +  DV   E++V  +V +    FG++DILV NA    
Sbjct: 39  SEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAG 98

Query: 60  FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 119
              P E+L+   +  VI+++ +G F++   AL  +KK             I+NIS+    
Sbjct: 99  PDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ-----------RIVNISSVAGL 147

Query: 120 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--APEEIR 177
                Q   +A+KAA+  +T++LALE      IRVN +APG I DT   + L  A  E  
Sbjct: 148 GGPPGQAAYAASKAALIGLTKALALELA-PRGIRVNAVAPGYI-DTPMTAALESAELEAL 205

Query: 178 SKATDYMAAYKFGEKWDIAMAALYLASD-AGKYVNGNTLIVDGG 220
            +    +   + G   ++A A  +LASD A  Y+ G TL VDGG
Sbjct: 206 KRLAARIPLGRLGTPEEVAAAVAFLASDEAASYITGQTLPVDGG 249

Length = 251

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score =  127 bits (321), Expect = 7e-36
 Identities = 73/225 (32%), Positives = 107/225 (47%), Gaps = 14/225 (6%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R +     A   +   G+ A     DV   E     VE+    FGK+DILVN A     
Sbjct: 36  SRNEEKAEEAQQLIEKEGVEATAFTCDVSDEEAIKAAVEAIEEDFGKIDILVNNAGIIRR 95

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            PAE+     +R VI+++  G F +     +++ K G G+        IINI + L    
Sbjct: 96  HPAEEFPEAEWRDVIDVNLNGVFFVSQAVARHMIKQGHGK--------IINICSLLSELG 147

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI--KDTAGVSKLAPEEIRSK 179
                  +A+K  V  +T++LA EW   + I+VN IAPG    + T  V  +A  E    
Sbjct: 148 GPPVPAYAASKGGVAGLTKALATEWA-RHGIQVNAIAPGYFATEMTEAV--VADPEFNDD 204

Query: 180 ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 224
               + A ++G+  D+  AA++LASDA  YVNG  + VDGG WL+
Sbjct: 205 ILKRIPAGRWGQPEDLVGAAVFLASDASDYVNGQIIFVDGG-WLA 248

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  125 bits (317), Expect = 3e-35
 Identities = 68/217 (31%), Positives = 101/217 (46%), Gaps = 20/217 (9%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV-PAEDLSP 69
            VAA    G  AI +  DV    D    V + +  FG +DILVN A       P  D+  
Sbjct: 44  RVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDE 103

Query: 70  NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT--LHYTA--TWYQ 125
             F  +  ++    ++    A+  ++  G        GG I+N+++T  L       WY 
Sbjct: 104 AEFDRIFAVNVKSPYLWTQAAVPAMRGEG--------GGAIVNVASTAGLRPRPGLGWY- 154

Query: 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD--TAGVSKLAPEEIRSKATDY 183
              +A+K AV ++T++LA E G D  IRVN +AP  ++             E R+K    
Sbjct: 155 ---NASKGAVITLTKALAAELGPD-KIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLAT 210

Query: 184 MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           +   + G   DIA AAL+LASD   ++ G TL+VDGG
Sbjct: 211 IPLGRLGTPEDIANAALFLASDEASWITGVTLVVDGG 247

Length = 251

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score =  125 bits (315), Expect = 5e-35
 Identities = 73/224 (32%), Positives = 105/224 (46%), Gaps = 21/224 (9%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA---AG 58
              +      V  L + G+ A+G+  DV  RED   VVE      G +DILVN A     
Sbjct: 30  RSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDILVNNAGITRD 89

Query: 59  NFLV--PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 116
           N L+    ED     +  VI+ +  G F +    L+ + K   G+        IINIS+ 
Sbjct: 90  NLLMRMKEED-----WDAVIDTNLTGVFNLTQAVLRIMIKQRSGR--------IINISSV 136

Query: 117 LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI 176
           +       Q + +A+KA V   T+SLA E  +   I VN +APG I DT    KL  E++
Sbjct: 137 VGLMGNAGQANYAASKAGVIGFTKSLAKELAS-RNITVNAVAPGFI-DTDMTDKL-SEKV 193

Query: 177 RSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           + K    +   +FG   ++A A  +LASD   Y+ G  + VDGG
Sbjct: 194 KKKILSQIPLGRFGTPEEVANAVAFLASDEASYITGQVIHVDGG 237

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  124 bits (314), Expect = 8e-35
 Identities = 71/222 (31%), Positives = 104/222 (46%), Gaps = 17/222 (7%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA---AG 58
            R +      V  + +LG  A  LE DV  RE    +VE     FG +DILVN A     
Sbjct: 31  DRSEEAAAETVEEIKALGGNAAALEADVSDREAVEALVEKVEAEFGPVDILVNNAGITRD 90

Query: 59  NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 118
           N L+    +S   +  VI ++  G F +    ++ + K   G+        IINIS+ + 
Sbjct: 91  NLLM---RMSEEDWDAVINVNLTGVFNVTQAVIRAMIKRRSGR--------IINISSVVG 139

Query: 119 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS 178
                 Q + +A+KA V   T+SLA E  +   I VN +APG I DT     L PE+++ 
Sbjct: 140 LIGNPGQANYAASKAGVIGFTKSLAKELAS-RGITVNAVAPGFI-DTDMTDAL-PEKVKE 196

Query: 179 KATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           K    +   + G   ++A A  +LASD   Y+ G  L V+GG
Sbjct: 197 KILKQIPLGRLGTPEEVANAVAFLASDDASYITGQVLHVNGG 238

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  123 bits (311), Expect = 3e-34
 Identities = 67/209 (32%), Positives = 104/209 (49%), Gaps = 11/209 (5%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
           +  +   G  AI ++ DV   ED   +VE  +  FGK+DILVN A  +      D++   
Sbjct: 47  LEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEE 106

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 131
           +  VI+++  G  ++   AL Y+ K           G+I+NIS+         ++  SA+
Sbjct: 107 WDRVIDVNLTGVMLLTRYALPYMIKRK--------SGVIVNISSIWGLIGASCEVLYSAS 158

Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 191
           K AV++ T++LA E      IRVN +APG I DT   S  + E+    A +     + G+
Sbjct: 159 KGAVNAFTKALAKELAP-SGIRVNAVAPGAI-DTEMWSSFSEEDKEGLAEEIPLG-RLGK 215

Query: 192 KWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             +IA   L+LASD   Y+ G  + VDGG
Sbjct: 216 PEEIAKVVLFLASDDASYITGQIITVDGG 244

Length = 247

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score =  120 bits (304), Expect = 2e-33
 Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 13/211 (6%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
            A +  LG  A+ +  DV + +D   +  +    FG+LD+LV+ AA     P  +L+P  
Sbjct: 40  AAEIEELGGKAVVVRADVSQPQDVEEMFAAVKERFGRLDVLVSNAAAGAFRPLSELTPAH 99

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT--LHYTATWYQIHVS 129
           +   +  +         +A K +++ G        GG I+ IS+   +     +  +   
Sbjct: 100 WDAKMNTNLKALVHCAQQAAKLMRERG--------GGRIVAISSLGSIRALPNYLAV--G 149

Query: 130 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKF 189
            AKAA++++ R LA+E G    IRVN ++PG I   A       E++   A     A + 
Sbjct: 150 TAKAALEALVRYLAVELG-PRGIRVNAVSPGVIDTDALAHFPNREDLLEAAAANTPAGRV 208

Query: 190 GEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           G   D+A A  +L SDA + + G TL+VDGG
Sbjct: 209 GTPQDVADAVGFLCSDAARMITGQTLVVDGG 239

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  120 bits (304), Expect = 3e-33
 Identities = 64/213 (30%), Positives = 99/213 (46%), Gaps = 11/213 (5%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
               V A+ +LG  A  ++ DV  +      V + +  FG++DILVN A      P  D+
Sbjct: 44  AEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADM 103

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
           S + +  VI+++  G F +    +  ++K          GG I+NIS+         + +
Sbjct: 104 SDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR--------GGRIVNISSVAGLPGWPGRSN 155

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 187
            +AAKA +  +T++LA E   +Y I VN +APG I DT        E   +K        
Sbjct: 156 YAAAKAGLVGLTKALARELA-EYGITVNMVAPGDI-DTDMKEATIEEAREAK-DAETPLG 212

Query: 188 KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           + G   DIA A  +L SDA  Y+ G  + V GG
Sbjct: 213 RSGTPEDIARAVAFLCSDASDYITGQVIEVTGG 245

Length = 249

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score =  120 bits (304), Expect = 4e-33
 Identities = 66/213 (30%), Positives = 101/213 (47%), Gaps = 10/213 (4%)

Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS 68
                 +   G  AI ++GDV    D V ++++ +  FG LD+++N A     VP+ ++S
Sbjct: 46  NDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMS 105

Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-YQIH 127
              +  VI  +  G F+   EA+KY  +           G IIN+S ++H    W   +H
Sbjct: 106 LEDWNKVINTNLTGAFLGSREAIKYFVEHDI-------KGNIINMS-SVHEQIPWPLFVH 157

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 187
            +A+K  V  +T +LA+E+     IRVN I PG I       K A  + R+     +   
Sbjct: 158 YAASKGGVKLMTETLAMEYAPK-GIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMG 216

Query: 188 KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             G+  +IA  A +LAS    YV G TL  DGG
Sbjct: 217 YIGKPEEIAAVAAWLASSEASYVTGITLFADGG 249

Length = 261

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score =  119 bits (300), Expect = 1e-32
 Identities = 66/196 (33%), Positives = 96/196 (48%), Gaps = 13/196 (6%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           DV  +E   +  +     FGK+DIL+  A      PA D +   +  VI+++  G F   
Sbjct: 66  DVSSQESVEKTFKQIQKDFGKIDILIANAGITVHKPALDYTYEQWNKVIDVNLNGVFNCA 125

Query: 88  HEALKYLKKGGRGQ--ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 145
             A K  KK G+G    ++S  G I+N            Q   +A+KAAV  + +SLA+E
Sbjct: 126 QAAAKIFKKQGKGSLIITASMSGTIVNRPQP--------QAAYNASKAAVIHLAKSLAVE 177

Query: 146 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 205
           W   Y IRVN I+PG I     ++    +E+R K   Y+   +     ++  A LYLASD
Sbjct: 178 W-AKYFIRVNSISPGYID--TDLTDFVDKELRKKWESYIPLKRIALPEELVGAYLYLASD 234

Query: 206 AGKYVNGNTLIVDGGN 221
           A  Y  G+ LI+DGG 
Sbjct: 235 ASSYTTGSDLIIDGGY 250

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score =  115 bits (290), Expect = 3e-31
 Identities = 69/216 (31%), Positives = 97/216 (44%), Gaps = 16/216 (7%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
            R   AAL + G  A  +  D+       R  ++     G LD LVN A       A +L
Sbjct: 44  ARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATEL 103

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
             + +  V+ ++  GTF+M   AL +L+  GRG+        I+N+++    TA W    
Sbjct: 104 DIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGR--------IVNLASD---TALWGAPK 152

Query: 128 V---SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM 184
           +    A+K AV  +TRSLA E G    I VN IAPG     A     A E          
Sbjct: 153 LGAYVASKGAVIGMTRSLARELGGR-GITVNAIAPGLTATEATAYVPADERHAYYL-KGR 210

Query: 185 AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           A  +     D+A A L+L SDA ++V G  L V+GG
Sbjct: 211 ALERLQVPDDVAGAVLFLLSDAARFVTGQLLPVNGG 246

Length = 250

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score =  113 bits (286), Expect = 1e-30
 Identities = 71/219 (32%), Positives = 100/219 (45%), Gaps = 12/219 (5%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
              K      VA + + G  AI ++ DV       R+ ++    FG +DILVN A     
Sbjct: 35  ASSKAAAEEVVAEIEAAGGKAIAVQADVSDPSQVARLFDAAEKAFGGVDILVNNAGVMLK 94

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            P  + S   F  +  +++ G F +  EA K L+ GGR          IINIS++L    
Sbjct: 95  KPIAETSEEEFDRMFTVNTKGAFFVLQEAAKRLRDGGR----------IINISSSLTAAY 144

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
           T      + +KAAV++ TR LA E G    I VN +APGP+ DT        EE      
Sbjct: 145 TPNYGAYAGSKAAVEAFTRVLAKELG-GRGITVNAVAPGPV-DTDMFYAGKTEEAVEGYA 202

Query: 182 DYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                 + GE  DIA    +LAS  G++VNG  +  +GG
Sbjct: 203 KMSPLGRLGEPEDIAPVVAFLASPDGRWVNGQVIRANGG 241

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score =  111 bits (278), Expect = 1e-29
 Identities = 74/213 (34%), Positives = 106/213 (49%), Gaps = 11/213 (5%)

Query: 13  AALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGF 72
             + +LG   + L  D+   E    +V+S +  FG +DILVN A       AE+ S   +
Sbjct: 45  QQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDW 104

Query: 73  RTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAK 132
             V+ ++    F +   A K+  K GRG       G IINI++ L +         +A+K
Sbjct: 105 DDVMNVNLKSVFFLTQAAAKHFLKQGRG-------GKIINIASMLSFQGGIRVPSYTASK 157

Query: 133 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA-TDYMAAYKFGE 191
            AV  +T+ LA EW     I VN IAPG +  T     L  +E R+ A  + + A ++G 
Sbjct: 158 HAVAGLTKLLANEWAA-KGINVNAIAPGYM-ATNNTQALRADEDRNAAILERIPAGRWGT 215

Query: 192 KWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 224
             DI   A++LAS A  YVNG TL VDGG WL+
Sbjct: 216 PDDIGGPAVFLASSASDYVNGYTLAVDGG-WLA 247

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  111 bits (278), Expect = 2e-29
 Identities = 65/205 (31%), Positives = 96/205 (46%), Gaps = 29/205 (14%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           DV  R+   +  E     FG++D+LVN A   +L+P E+     +  +I+I+  G     
Sbjct: 59  DVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTT 118

Query: 88  HEALKYLKKGGRGQASSSSGGIIINISA-----TLHYTATWYQIHVSAAKAAVDSITRSL 142
           +E L  LK         S  G I+NI++     T     T+Y I     KA +  +TR L
Sbjct: 119 YEFLPLLKL--------SKNGAIVNIASNAGIGTAAEGTTFYAI----TKAGIIILTRRL 166

Query: 143 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI-------RSKATDYMAAYKFGEKWDI 195
           A E G  Y IRVN +APG ++    +S  + EE        R+K          G+  DI
Sbjct: 167 AFELG-KYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKT----TGKPEDI 221

Query: 196 AMAALYLASDAGKYVNGNTLIVDGG 220
           A   L+LASD  +Y+ G  ++ DGG
Sbjct: 222 ANIVLFLASDDARYITGQVIVADGG 246

Length = 255

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score =  108 bits (271), Expect = 2e-28
 Identities = 70/199 (35%), Positives = 103/199 (51%), Gaps = 10/199 (5%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81
           A GL  DV   +     V + I+ FG++DILVN+A    L PAED+S   +   I+I+  
Sbjct: 63  AKGLVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLK 122

Query: 82  GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 141
           G+F+M     +++   G        GG I+N+++     A    +   A+KA V  +T+ 
Sbjct: 123 GSFLMAQAVGRHMIAAG--------GGKIVNLASQAGVVALERHVAYCASKAGVVGMTKV 174

Query: 142 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 201
           LALEWG  Y I VN I+P  +  T    K    E   +A   + A +F    +IA AAL+
Sbjct: 175 LALEWG-PYGITVNAISP-TVVLTELGKKAWAGEKGERAKKLIPAGRFAYPEEIAAAALF 232

Query: 202 LASDAGKYVNGNTLIVDGG 220
           LASDA   + G  L++DGG
Sbjct: 233 LASDAAAMITGENLVIDGG 251

Length = 255

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score =  107 bits (269), Expect = 4e-28
 Identities = 66/226 (29%), Positives = 98/226 (43%), Gaps = 24/226 (10%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
           R    L      + + G  AI +  DV  + D    V  T    G L + VNAA      
Sbjct: 41  RTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGALTLAVNAAGIANAN 100

Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ----ASSSSGGIIINISATLH 118
           PAE++    ++TV++I+  G F+ C    + + + G G     AS S  GII+N      
Sbjct: 101 PAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMS--GIIVNRGLL-- 156

Query: 119 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG----PIKDTAGVSKLAPE 174
                 Q H +A+KA V  +++SLA+EW     IRVN I+PG    P+     +      
Sbjct: 157 ------QAHYNASKAGVIHLSKSLAMEW-VGRGIRVNSISPGYTATPMNTRPEMVHQTKL 209

Query: 175 EIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                    MA        ++   A++L SDA  +  G  L+VDGG
Sbjct: 210 FEEQTPMQRMAKVD-----EMVGPAVFLLSDAASFCTGVDLLVDGG 250

Length = 254

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score =  107 bits (268), Expect = 5e-28
 Identities = 70/234 (29%), Positives = 105/234 (44%), Gaps = 37/234 (15%)

Query: 10  SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSP 69
            A  A   +G  AI +  DV +++   R+V + +  FG +DIL N AA   + P  D+S 
Sbjct: 42  RARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISR 101

Query: 70  NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISA---------TLHYT 120
           + +  +  ++  G F +     +++ + GR       GG IIN+++           HY 
Sbjct: 102 DSYDRLFAVNVKGLFFLMQAVARHMVEQGR-------GGKIINMASQAGRRGEALVSHYC 154

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT----------AGVSK 170
           AT         KAAV S T+S AL     + I VN IAPG + DT          A    
Sbjct: 155 AT---------KAAVISYTQSAALAL-IRHGINVNAIAPGVV-DTPMWDQVDALFARYEN 203

Query: 171 LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 224
             P E +    + +   + G   D+   AL+LAS    Y+   T  VDGGNW+S
Sbjct: 204 RPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLASADADYIVAQTYNVDGGNWMS 257

Length = 257

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score =  106 bits (267), Expect = 7e-28
 Identities = 65/227 (28%), Positives = 98/227 (43%), Gaps = 29/227 (12%)

Query: 8   LRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV---P 63
           L      L +L     I LE D+  +E    ++ES +  FG++DIL+N A  +  V    
Sbjct: 39  LEQLKEELTNLYKNRVIALELDITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSR 98

Query: 64  AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL------ 117
            E+     +  V+ ++  G F+     +K  KK G+G         IINI++        
Sbjct: 99  FEEFPYEQWNEVLNVNLGGAFLCSQAFIKLFKKQGKG--------SIINIASIYGVIAPD 150

Query: 118 --HYTATWYQ--IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP 173
              Y  T     +  S  KA +  +T+ LA  +  D  IRVN I+PG I +        P
Sbjct: 151 FRIYENTQMYSPVEYSVIKAGIIHLTKYLAKYYA-DTGIRVNAISPGGILNNQ------P 203

Query: 174 EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            E   K T      +     D+  A ++L SDA  YV G  L++DGG
Sbjct: 204 SEFLEKYTKKCPLKRMLNPEDLRGAIIFLLSDASSYVTGQNLVIDGG 250

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  106 bits (267), Expect = 7e-28
 Identities = 67/209 (32%), Positives = 97/209 (46%), Gaps = 10/209 (4%)

Query: 13  AALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGF 72
           AA   LG  A     DV   +    VV++    FG+LD+LVN A        E  +   +
Sbjct: 44  AAAAELGDAARFFHLDVTDEDGWTAVVDTAREAFGRLDVLVNNAGILTGGTVETTTLEEW 103

Query: 73  RTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAK 132
           R +++I+  G F+     +  +K+ G        GG IIN+S+             +A+K
Sbjct: 104 RRLLDINLTGVFLGTRAVIPPMKEAG--------GGSIINMSSIEGLVGDPALAAYNASK 155

Query: 133 AAVDSITRSLALEWGT-DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 191
            AV  +T+S ALE  T  Y IRVN + PG I  T    +L   +            + GE
Sbjct: 156 GAVRGLTKSAALECATQGYGIRVNSVHPGYIY-TPMTDELLIAQGEMGNYPNTPMGRAGE 214

Query: 192 KWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             +IA A +YLASD   +V G+ L+VDGG
Sbjct: 215 PDEIAYAVVYLASDESSFVTGSELVVDGG 243

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score =  106 bits (267), Expect = 8e-28
 Identities = 59/212 (27%), Positives = 94/212 (44%), Gaps = 18/212 (8%)

Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA-EDLSPNGFRTVIE 77
           G        DV       RV ++ +  FG LD+LVN A         ++++P  +   + 
Sbjct: 57  GAKVTATVADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLA 116

Query: 78  IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDS 137
           ++  G F     A+  LK  G G       G+II +S+         +   +A+K AV  
Sbjct: 117 VNLNGQFYFARAAVPLLKASGHG-------GVIIALSSVAGRLGYPGRTPYAASKWAVVG 169

Query: 138 ITRSLALEWGTDYAIRVNGIAPG---------PIKDTAGVSKLAPEEIRSKATDYMAAYK 188
           + +SLA+E G    IRVN I PG          I+  A    +  +E+  +  + ++  +
Sbjct: 170 LVKSLAIELG-PLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGR 228

Query: 189 FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             E  DIA  AL+LAS A +Y+ G  + VDG 
Sbjct: 229 MVEPEDIAATALFLASPAARYITGQAISVDGN 260

Length = 264

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score =  106 bits (265), Expect = 9e-28
 Identities = 72/213 (33%), Positives = 106/213 (49%), Gaps = 11/213 (5%)

Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAE-DL 67
            +  AA+   G  AIGLE +V   +D   VV++T++ FG + ILVN A G    P +  +
Sbjct: 37  EAVAAAIQQAGGQAIGLECNVTSEQDLEAVVKATVSQFGGITILVNNAGGGGPKPFDMPM 96

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
           +   F    +++    F +      +++K G        GG I+NIS+            
Sbjct: 97  TEEDFEWAFKLNLFSAFRLSQLCAPHMQKAG--------GGAILNISSMSSENKNVRIAA 148

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 187
             ++KAAV+ +TR+LA + G    IRVN +APG +K  A  S L P EI      +    
Sbjct: 149 YGSSKAAVNHMTRNLAFDLGPK-GIRVNAVAPGAVKTDALASVLTP-EIERAMLKHTPLG 206

Query: 188 KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           + GE  DIA AAL+L S A  +V+G  L V GG
Sbjct: 207 RLGEPEDIANAALFLCSPASAWVSGQVLTVSGG 239

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score =  106 bits (266), Expect = 9e-28
 Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 19/221 (8%)

Query: 4   RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP 63
           R++ L++ V+    L + A     D+ + E   R++ +T+  FG+LDILVN A       
Sbjct: 44  RQSCLQAGVSEKKILLVVA-----DLTEEEGQDRIISTTLAKFGRLDILVNNAGILAKGG 98

Query: 64  AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 123
            ED     +  V+ ++      +   A+ +L K         + G I+N+S+     +  
Sbjct: 99  GEDQDIEEYDKVMNLNLRAVIYLTKLAVPHLIK---------TKGEIVNVSSVAGGRSFP 149

Query: 124 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG----PIKDTAGVSKLAPEEIRSK 179
             ++   +KAA+D  TR  ALE      +RVN ++PG          G+ +    +  S+
Sbjct: 150 GVLYYCISKAALDQFTRCTALELAP-KGVRVNSVSPGVIVTGFHRRMGMPEEQYIKFLSR 208

Query: 180 ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           A +     + G   ++A A  +LASDA  ++ G  L VDGG
Sbjct: 209 AKETHPLGRPGTVDEVAEAIAFLASDASSFITGQLLPVDGG 249

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score =  105 bits (264), Expect = 2e-27
 Identities = 66/207 (31%), Positives = 102/207 (49%), Gaps = 22/207 (10%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDS 80
           AI ++ DV KR D   +VE+ ++ FG+LDILVN A       P  ++    F  V  ++ 
Sbjct: 53  AIAIQADVTKRADVEAMVEAALSKFGRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVNV 112

Query: 81  VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA----TWYQIHVSAAKAAVD 136
              ++     + ++++ G        GG+IINI++T         TWY    +A+K  V 
Sbjct: 113 KSIYLSAQALVPHMEEQG--------GGVIINIASTAGLRPRPGLTWY----NASKGWVV 160

Query: 137 SITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE---EIRSKATDYMAAYKFGEKW 193
           + T+++A+E      IRVN + P    +T  +S    E   E R+K    +   +     
Sbjct: 161 TATKAMAVELAPR-NIRVNCLCP-VAGETPLLSMFMGEDTPENRAKFRATIPLGRLSTPD 218

Query: 194 DIAMAALYLASDAGKYVNGNTLIVDGG 220
           DIA AALYLASD   ++ G  L VDGG
Sbjct: 219 DIANAALYLASDEASFITGVALEVDGG 245

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score =  105 bits (263), Expect = 2e-27
 Identities = 65/215 (30%), Positives = 98/215 (45%), Gaps = 19/215 (8%)

Query: 10  SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN----FLVPAE 65
             V  +  LG  A     D+   ++   + +  ++  GK+DILVN A G     F +P  
Sbjct: 50  HVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMA 109

Query: 66  DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 125
           D     FR   E++    F +       ++K G        GG+I+ I++          
Sbjct: 110 D-----FRRAYELNVFSFFHLSQLVAPEMEKNG--------GGVILTITSMAAENKNINM 156

Query: 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA 185
              +++KAA   + R++A + G    IRVNGIAPG I   A  S + P EI  K   +  
Sbjct: 157 TSYASSKAAASHLVRNMAFDLGEK-NIRVNGIAPGAILTDALKSVITP-EIEQKMLQHTP 214

Query: 186 AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             + G+  DIA AAL+L S A  +V+G  L V GG
Sbjct: 215 IRRLGQPQDIANAALFLCSPAASWVSGQILTVSGG 249

Length = 255

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  107 bits (268), Expect = 1e-26
 Identities = 67/212 (31%), Positives = 100/212 (47%), Gaps = 21/212 (9%)

Query: 17  SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--GNFLVPAEDLSPNGFRT 74
           SLG     L  DV          E     FG++D+LVN A      +    D +   F  
Sbjct: 48  SLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFAR 107

Query: 75  VIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAA 134
           +  I+  G +++  EAL+ + + G G A       I+N+++     A   +   SA+KAA
Sbjct: 108 LQAINLTGAYLVAREALRLMIEQGHGAA-------IVNVASGAGLVALPKRTAYSASKAA 160

Query: 135 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY------K 188
           V S+TRSLA EW     IRVN + PG ++     +++  E  R+   D  A        +
Sbjct: 161 VISLTRSLACEWAAK-GIRVNAVLPGYVR-----TQMVAELERAGKLDPSAVRSRIPLGR 214

Query: 189 FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            G   +IA A  +LASD   Y+ G+TL+VDGG
Sbjct: 215 LGRPEEIAEAVFFLASDQASYITGSTLVVDGG 246

Length = 520

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score =  103 bits (258), Expect = 2e-26
 Identities = 72/221 (32%), Positives = 109/221 (49%), Gaps = 23/221 (10%)

Query: 10  SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSP 69
             +AA   LGI A G   DV   +    +V       G +DILVN A     +P  ++S 
Sbjct: 49  KGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSA 108

Query: 70  NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL----HYTATWYQ 125
             FR VI+ID    FI+    +  + K G G+        IINI + +      T + Y 
Sbjct: 109 EDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGK--------IINICSMMSELGRETVSAY- 159

Query: 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI--KDTAGVSKLAPEEIRSKATDY 183
              +AAK  +  +T+++A E+G +  I+ NGI PG I    TA + +L  +  R     +
Sbjct: 160 ---AAAKGGLKMLTKNIASEYG-EANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQF 215

Query: 184 M----AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           +     A ++G+  D+A  A++LASDA  +VNG+ L VDGG
Sbjct: 216 IIAKTPAARWGDPEDLAGPAVFLASDASNFVNGHILYVDGG 256

Length = 265

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score =  102 bits (256), Expect = 3e-26
 Identities = 66/214 (30%), Positives = 102/214 (47%), Gaps = 13/214 (6%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
            VAA  + G  A   +GDV   E    +V+     +G+LD+LVN A              
Sbjct: 44  RVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEA 103

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            +  V+ ++  G F+    A+  +++ G        GG I+N ++ L       +    A
Sbjct: 104 DWDAVMRVNVGGVFLWAKYAIPIMQRQG--------GGSIVNTASQLALAGGRGRAAYVA 155

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD---TAGVSKLA-PEEIRSKATDYMAA 186
           +K A+ S+TR++AL+  TD  IRVN +APG I         ++ A PE +R         
Sbjct: 156 SKGAIASLTRAMALDHATD-GIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPM 214

Query: 187 YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            +FG   ++A AAL+LASD   +  G TL+VDGG
Sbjct: 215 NRFGTAEEVAQAALFLASDESSFATGTTLVVDGG 248

Length = 252

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  102 bits (256), Expect = 3e-26
 Identities = 67/201 (33%), Positives = 105/201 (52%), Gaps = 12/201 (5%)

Query: 25  LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 84
           ++ D+ K E A +VV+  +  FGK+DILVN A      P  +     +  V++I+    +
Sbjct: 68  VQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVY 127

Query: 85  IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
            +     K + K G G+        IINI++ L +    +    +A+K  V  +T++ A 
Sbjct: 128 HLSQAVAKVMAKQGSGK--------IINIASMLSFQGGKFVPAYTASKHGVAGLTKAFAN 179

Query: 145 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT-DYMAAYKFGEKWDIAMAALYLA 203
           E    Y I+VN IAPG IK TA  + +  ++ R+      + A ++GE  D+  AA++LA
Sbjct: 180 ELA-AYNIQVNAIAPGYIK-TANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLA 237

Query: 204 SDAGKYVNGNTLIVDGGNWLS 224
           S A  YVNG+ L VDGG WL 
Sbjct: 238 SRASDYVNGHILAVDGG-WLV 257

Length = 258

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score =  102 bits (254), Expect = 4e-26
 Identities = 74/219 (33%), Positives = 111/219 (50%), Gaps = 12/219 (5%)

Query: 5   KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA 64
           K    + V  L   G     ++ DV K EDA R+VE  +NHFGK+DILVN A        
Sbjct: 41  KEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTF 100

Query: 65  EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 124
           + L+   +  VI+++    F      L Y+        + +  G II+IS+ +     + 
Sbjct: 101 KKLNREDWERVIDVNLSSVFNTTSAVLPYI--------TEAEEGRIISISSIIGQAGGFG 152

Query: 125 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM 184
           Q + SAAKA +   T+SLALE      + VN I PG I DT  V+++ PEE+R K    +
Sbjct: 153 QTNYSAAKAGMLGFTKSLALELAKT-NVTVNAICPGFI-DTEMVAEV-PEEVRQKIVAKI 209

Query: 185 AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 223
              +FG+  +IA   +YL  D G Y+ G  L ++GG ++
Sbjct: 210 PKKRFGQADEIAKGVVYLCRD-GAYITGQQLNINGGLYM 247

Length = 247

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score =  101 bits (254), Expect = 5e-26
 Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 11/217 (5%)

Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS 68
              +  + +LG   + L  D+RK +    ++E  +  FG +DILVN A       A + S
Sbjct: 46  TETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFS 105

Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 128
              +  V+ ++    F M   A K+    G       +GG IINI++ L +         
Sbjct: 106 EKDWDDVMNLNIKSVFFMSQAAAKHFIAQG-------NGGKIINIASMLSFQGGIRVPSY 158

Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT-DYMAAY 187
           +A+K+ V  +TR +A EW   + I VN IAPG +  T    +L  +E RS    D + A 
Sbjct: 159 TASKSGVMGVTRLMANEWAK-HNINVNAIAPGYMA-TNNTQQLRADEQRSAEILDRIPAG 216

Query: 188 KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 224
           ++G   D+    ++LAS A  Y+NG T+ VDGG WL+
Sbjct: 217 RWGLPSDLMGPVVFLASSASDYINGYTIAVDGG-WLA 252

Length = 253

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score =  101 bits (255), Expect = 5e-26
 Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 29/203 (14%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           DVR  +    +V++ +   G+LD+LVN A G+    A + SP     ++E++ +   ++ 
Sbjct: 55  DVRDPDQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVA 114

Query: 88  HEALKYLKKGGRGQASSSSGGIIINISA---------TLHYTATWYQIHVSAAKAAVDSI 138
             A   +++          GG I+NI +         T  Y          AAKA + ++
Sbjct: 115 QAANAVMQQ-------QPGGGSIVNIGSVSGRRPSPGTAAY---------GAAKAGLLNL 158

Query: 139 TRSLALEWGTDYAIRVNGIAPGPIK-DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 197
           TRSLA+EW     +RVN +  G ++ + + +     E I + A   +   +     DIA 
Sbjct: 159 TRSLAVEWAPK--VRVNAVVVGLVRTEQSELHYGDAEGIAAVA-ATVPLGRLATPADIAW 215

Query: 198 AALYLASDAGKYVNGNTLIVDGG 220
           A L+LASD   YV+G  L V GG
Sbjct: 216 ACLFLASDLASYVSGANLEVHGG 238

Length = 252

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score =  101 bits (254), Expect = 6e-26
 Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 11/219 (5%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
           R +         + +LG  A+ ++ +V   E    +       FG+LD+ VN AA   L 
Sbjct: 37  RSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLR 96

Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 122
           PA +L  + +   + I++        EA K ++K G        GG II++S+       
Sbjct: 97  PAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVG--------GGKIISLSSLGSIRYL 148

Query: 123 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKAT 181
                V  +KAA++++TR LA+E      I VN ++ G + DT  +      EE+   A 
Sbjct: 149 ENYTTVGVSKAALEALTRYLAVELAP-KGIAVNAVSGGAV-DTDALKHFPNREELLEDAR 206

Query: 182 DYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
               A +  E  D+A A L+L S     + G T+IVDGG
Sbjct: 207 AKTPAGRMVEPEDVANAVLFLCSPEADMIRGQTIIVDGG 245

Length = 250

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score =  101 bits (253), Expect = 8e-26
 Identities = 64/217 (29%), Positives = 93/217 (42%), Gaps = 16/217 (7%)

Query: 10  SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV------P 63
           SA A     G  AI ++ DVR R+    ++E   NHFG +D +VN A  +F         
Sbjct: 37  SAEAVAAEAGERAIAIQADVRDRDQVQAMIEEAKNHFGPVDTIVNNALIDFPFDPDQRKT 96

Query: 64  AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 123
            + +    ++  +E    G   +    L   K+ G G+        +INI   L      
Sbjct: 97  FDTIDWEDYQQQLEGAVKGALNLLQAVLPDFKERGSGR--------VINIGTNLFQNPVV 148

Query: 124 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY 183
                + AKAA+   TR++A E G  Y I VN ++ G +K T   S   P+E+       
Sbjct: 149 PYHDYTTAKAALLGFTRNMAKELG-PYGITVNMVSGGLLKVT-DASAATPKEVFDAIAQT 206

Query: 184 MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
               K     DIA A L+ AS   + V G  L+VDGG
Sbjct: 207 TPLGKVTTPQDIADAVLFFASPWARAVTGQNLVVDGG 243

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score =  101 bits (254), Expect = 1e-25
 Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 13/212 (6%)

Query: 13  AALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA-EDLSPNG 71
             +   G   + + GD+        +V+  +  FGKLDILVN AA      + ED++   
Sbjct: 70  KLIEEEGRKCLLIPGDLGDESFCRDLVKEVVKEFGKLDILVNNAAYQHPQESIEDITTEQ 129

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 131
                  +    F +   AL +LKKG            IIN ++   Y  + + +  +A 
Sbjct: 130 LEKTFRTNIFSMFYLTKAALPHLKKGSS----------IINTTSVTAYKGSPHLLDYAAT 179

Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 191
           K A+ + TR L+L+   +  IRVN +APGPI  T  +    PEE  S+    +   + G+
Sbjct: 180 KGAIVAFTRGLSLQLA-EKGIRVNAVAPGPIW-TPLIPSSFPEEKVSEFGSQVPMGRAGQ 237

Query: 192 KWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 223
             ++A A ++LAS    YV G  L V+GG  +
Sbjct: 238 PAEVAPAYVFLASQDSSYVTGQVLHVNGGEII 269

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score =  101 bits (253), Expect = 1e-25
 Identities = 65/220 (29%), Positives = 103/220 (46%), Gaps = 16/220 (7%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
           L      + +LG   +  + DVR   +   VVE  +  FG+LD++V  A       + +L
Sbjct: 53  LDETARLVEALGRKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVLSYGRSWEL 112

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
           S   + TV++I+  G +  C   + ++ + G       +GG II  S+     A     H
Sbjct: 113 SEEQWDTVLDINLTGVWRTCKAVVPHMIERG-------NGGSIIITSSVAGLKALPGLAH 165

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 187
            +AAK  +  +T++LA E   +Y IRVN I P  + DT  ++  A  E   K  +   A+
Sbjct: 166 YAAAKHGLVGLTKTLANELA-EYGIRVNSIHPYSV-DTPMIAPEAMREAFLKYPEAARAF 223

Query: 188 K-------FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                   F    D+A A L+LASD  +Y+ G+ L VD G
Sbjct: 224 MPALPVSGFVPPEDVADAVLWLASDESRYITGHQLPVDAG 263

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score =  100 bits (250), Expect = 2e-25
 Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 12/209 (5%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
            A + + G  A+GL  DVR        +++ +  FG+LDILVN A         +LS   
Sbjct: 51  AAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEE 110

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 131
           +  VI+++  G F +   AL  + +  R       GG I+NI++         Q++ +A+
Sbjct: 111 WDDVIDVNLDGFFNVTQAALPPMIRARR-------GGRIVNIASVAGVRGNRGQVNYAAS 163

Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 191
           KA +  +T++LA E      I VN +APG I +T      AP E      + +   + GE
Sbjct: 164 KAGLIGLTKTLANELA-PRGITVNAVAPGAI-NTPMADNAAPTE---HLLNPVPVQRLGE 218

Query: 192 KWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             ++A    +L SDA  YV G  + VDGG
Sbjct: 219 PDEVAALVAFLVSDAASYVTGQVIPVDGG 247

Length = 249

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score =  100 bits (250), Expect = 2e-25
 Identities = 59/208 (28%), Positives = 89/208 (42%), Gaps = 10/208 (4%)

Query: 14  ALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGF 72
                G    G   DV  R +   ++++  +HF GKL+ILVN A  N    A+D +   +
Sbjct: 49  EWREKGFKVEGSVCDVSSRSERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYTEEDY 108

Query: 73  RTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAK 132
             ++  +    + +   A   LK  G G         I+ IS+     A        A K
Sbjct: 109 SLIMSTNFEAAYHLSRLAHPLLKASGNGN--------IVFISSVAGVIAVPSGAPYGATK 160

Query: 133 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEK 192
            A++ +TRSLA EW  D  IRVN +AP  I        +  +E   K  +     +FGE 
Sbjct: 161 GALNQLTRSLACEWAKD-NIRVNAVAPWVIATPLVEPVIQQKENLDKVIERTPLKRFGEP 219

Query: 193 WDIAMAALYLASDAGKYVNGNTLIVDGG 220
            ++A    +L   A  Y+ G  + VDGG
Sbjct: 220 EEVAALVAFLCMPAASYITGQIIAVDGG 247

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 99.6 bits (249), Expect = 6e-25
 Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 38/245 (15%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN- 59
           + R +    + VA + + G  A+ ++ DV  +E   +  +  +  FG  DIL+N A GN 
Sbjct: 40  LDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPCDILINGAGGNH 99

Query: 60  ---------FLVPAE-----DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSS 105
                      +        DL   GF  V +++ +GT +      K +           
Sbjct: 100 PKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRK------- 152

Query: 106 SGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG----- 160
            GG IINIS+   +T        SAAKAA+ + T+ LA+ +     IRVN IAPG     
Sbjct: 153 -GGNIINISSMNAFTPLTKVPAYSAAKAAISNFTQWLAVHFAKV-GIRVNAIAPGFFLTE 210

Query: 161 ----PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD-AGKYVNGNTL 215
                + +  G    +  E  +K   +    +FG+  ++    L+LA + A  +V G  L
Sbjct: 211 QNRALLFNEDG----SLTERANKILAHTPMGRFGKPEELLGTLLWLADEKASSFVTGVVL 266

Query: 216 IVDGG 220
            VDGG
Sbjct: 267 PVDGG 271

Length = 278

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 99.0 bits (247), Expect = 7e-25
 Identities = 57/222 (25%), Positives = 91/222 (40%), Gaps = 17/222 (7%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
            +S +  +   G  A+ +  DV  ++D   +++  +  FG  D++VN A    + P   +
Sbjct: 40  AKSTIQEISEAGYNAVAVGADVTDKDDVEALIDQAVEKFGSFDVMVNNAGIAPITPLLTI 99

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
           +    + V  ++  G       A +  KK G        GG IIN S+            
Sbjct: 100 TEEDLKKVYAVNVFGVLFGIQAAARQFKKLGH-------GGKIINASSIAGVQGFPNLGA 152

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT------AGVSKLA--PEEIRSK 179
            SA+K AV  +T++ A E      I VN  APG +K          V ++A  PE     
Sbjct: 153 YSASKFAVRGLTQTAAQELA-PKGITVNAYAPGIVKTEMWDYIDEEVGEIAGKPEGEGFA 211

Query: 180 ATDYMAAYK-FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                       E  D+A    +LAS+   Y+ G T++VDGG
Sbjct: 212 EFSSSIPLGRLSEPEDVAGLVSFLASEDSDYITGQTILVDGG 253

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 98.7 bits (246), Expect = 1e-24
 Identities = 72/242 (29%), Positives = 104/242 (42%), Gaps = 33/242 (13%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN- 59
           +GR +         + +LG  AI L  DV  R    R  E  +  FG +DIL+N A GN 
Sbjct: 35  LGRNQEKGDKVAKEITALGGRAIALAADVLDRASLERAREEIVAQFGTVDILINGAGGNH 94

Query: 60  --------FLVPAE-----DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSS 106
                      P       DL   G+  V +++  G+F+      K + +          
Sbjct: 95  PDATTDPEHYEPETEQNFFDLDEEGWEFVFDLNLNGSFLPSQVFGKDMLEQK-------- 146

Query: 107 GGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 166
           GG IINIS+   ++        SAAKAAV + T+ LA+E+ T   +RVN IAPG      
Sbjct: 147 GGSIINISSMNAFSPLTKVPAYSAAKAAVSNFTQWLAVEFATT-GVRVNAIAPGFFVTPQ 205

Query: 167 GVSKLAPEEIRSKATDYMAAY-------KFGEKWDIAMAALYLASD-AGKYVNGNTLIVD 218
               L   +     TD            +FG+  ++  A L+LAS+ A  +V G  + VD
Sbjct: 206 NRKLLINPD--GSYTDRSNKILGRTPMGRFGKPEELLGALLFLASEKASSFVTGVVIPVD 263

Query: 219 GG 220
           GG
Sbjct: 264 GG 265

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 97.1 bits (242), Expect = 3e-24
 Identities = 67/219 (30%), Positives = 94/219 (42%), Gaps = 9/219 (4%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
           GR    L +AVAAL + G  A  L  D+   E             G+LDILVN       
Sbjct: 42  GRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRLDILVNNVGARDR 101

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            P  +L     R ++E D V   ++   A + +K+ G         G II I++     A
Sbjct: 102 RPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQG--------YGRIIAITSIAGQVA 153

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
                   AAK  +  + R+LA E+G  + I  N IAPG        +  A   +     
Sbjct: 154 RAGDAVYPAAKQGLTGLMRALAAEFGP-HGITSNAIAPGYFATETNAAMAADPAVGPWLA 212

Query: 182 DYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                 ++G   +IA AA++LAS A  YVNG+ L VDGG
Sbjct: 213 QRTPLGRWGRPEEIAGAAVFLASPAASYVNGHVLAVDGG 251

Length = 256

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 96.6 bits (241), Expect = 5e-24
 Identities = 53/228 (23%), Positives = 98/228 (42%), Gaps = 18/228 (7%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R +  L  A + L + G   + +  D+   ED  R+VE   + FG++DILVN A G   
Sbjct: 32  ARNRENLERAASELRAGGAGVLAVVADLTDPEDIDRLVEKAGDAFGRVDILVNNAGGPPP 91

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            P  +L+   +    ++  +    +    L  +K+           G I+NIS+      
Sbjct: 92  GPFAELTDEDWLEAFDLKLLSVIRIVRAVLPGMKE--------RGWGRIVNISSLTVKEP 143

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI---------KDTAGVSKLA 172
               +  + A+A +  + ++L+ E   D  + VN + PG I         +  A    ++
Sbjct: 144 EPNLVLSNVARAGLIGLVKTLSRELAPD-GVTVNSVLPGYIDTERVRRLLEARAEKEGIS 202

Query: 173 PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            EE   +    +   + G+  ++A    +LAS+   Y+ G  ++VDGG
Sbjct: 203 VEEAEKEVASQIPLGRVGKPEELAALIAFLASEKASYITGQAILVDGG 250

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 96.2 bits (240), Expect = 6e-24
 Identities = 63/177 (35%), Positives = 90/177 (50%), Gaps = 12/177 (6%)

Query: 46  FGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASS 104
            G+LDILVN AA N +     D     F+  ++++  G F M  EA K +K+ G      
Sbjct: 83  HGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQG------ 136

Query: 105 SSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD 164
             GG I+N+++    +   +Q   S  KAAV S+T++ A E      IRVN + PG + D
Sbjct: 137 --GGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECAPF-GIRVNALLPG-LTD 192

Query: 165 TAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           T   S L   + I  +A  ++   +  E  ++A A LYLASDA  Y  G  L VDGG
Sbjct: 193 TKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLASDASSYTTGECLNVDGG 249

Length = 252

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 96.4 bits (240), Expect = 7e-24
 Identities = 59/213 (27%), Positives = 91/213 (42%), Gaps = 10/213 (4%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
            R  +A          GL  DV   ED   +++   +H+  L ILVN A GN    A D 
Sbjct: 49  ARDELAEEFP-EREVHGLAADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDY 107

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
           + + +R + E +    F +   A   LK+         +   I+NI +    T       
Sbjct: 108 TEDEWRGIFETNLFSAFELSRYAHPLLKQ--------HASSAIVNIGSVSGLTHVRSGAP 159

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 187
               KAA+  +TR+LA+EW  D  IRVN +AP  I+       L+  +   +  +     
Sbjct: 160 YGMTKAALLQMTRNLAVEWAED-GIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMR 218

Query: 188 KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           + GE  ++A A  +L   A  Y+ G  + VDGG
Sbjct: 219 RVGEPEEVAAAVAFLCMPAASYITGQCIAVDGG 251

Length = 257

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 95.5 bits (238), Expect = 2e-23
 Identities = 64/205 (31%), Positives = 90/205 (43%), Gaps = 17/205 (8%)

Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA---EDLSPNGFRTV 75
           G+  + + GDV         VE T+   G+LDILVN AA  F  P    ED++       
Sbjct: 95  GVKCLLIPGDVSDEAFCKDAVEETVRELGRLDILVNNAA--FQYPQQSLEDITAEQLDKT 152

Query: 76  IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 135
            + +    F M   AL +LK           G  IIN  +   Y      I  SA K A+
Sbjct: 153 FKTNIYSYFHMTKAALPHLK----------QGSAIINTGSITGYEGNETLIDYSATKGAI 202

Query: 136 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 195
            + TRSLA        IRVN +APGPI      S    E++    ++     + G+  ++
Sbjct: 203 HAFTRSLAQSLVQK-GIRVNAVAPGPIWTPLIPSDFDEEKVSQFGSN-TPMQRPGQPEEL 260

Query: 196 AMAALYLASDAGKYVNGNTLIVDGG 220
           A A ++LAS    Y+ G  L V+GG
Sbjct: 261 APAYVFLASPDSSYITGQMLHVNGG 285

Length = 290

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 94.8 bits (236), Expect = 3e-23
 Identities = 68/220 (30%), Positives = 95/220 (43%), Gaps = 13/220 (5%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
           R ++ L      + + G  A  +  D+   E    +    +  FG+LDI+VN   G    
Sbjct: 42  RTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPN 101

Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 122
           P    S          +      +   A+  + +        S GG +INIS+T+   A 
Sbjct: 102 PLLSTSTKDLADAFTFNVATAHALTVAAVPLMLE-------HSGGGSVINISSTMGRLAG 154

Query: 123 WYQIHVSAAKAAVDSITRSLALEWGTDYA--IRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
                   AKAA+   TR  AL    D    IRVN IAPG I  +A     A +E+R+  
Sbjct: 155 RGFAAYGTAKAALAHYTRLAAL----DLCPRIRVNAIAPGSILTSALEVVAANDELRAPM 210

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                  + G+  DIA AA+YLAS AG Y+ G TL VDGG
Sbjct: 211 EKATPLRRLGDPEDIAAAAVYLASPAGSYLTGKTLEVDGG 250

Length = 263

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 97.6 bits (243), Expect = 4e-23
 Identities = 63/216 (29%), Positives = 96/216 (44%), Gaps = 14/216 (6%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVN-AAAGNFLVPAEDLSP 69
           A     +LG   + ++ D+                +G+LD+LVN A       P+ + S 
Sbjct: 306 AKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSA 365

Query: 70  NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 129
             F  V +++  G F     A +            S GG+I+N+ +     A   +    
Sbjct: 366 EDFTRVYDVNLSGAFACARAAAR----------LMSQGGVIVNLGSIASLLALPPRNAYC 415

Query: 130 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-K 188
           A+KAAV  ++RSLA EW     IRVN +APG I+  A ++  A       +        +
Sbjct: 416 ASKAAVTMLSRSLACEWAP-AGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGR 474

Query: 189 FGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 224
            G+  ++A A  +LAS A  YVNG TL VDGG W +
Sbjct: 475 LGDPEEVAEAIAFLASPAASYVNGATLTVDGG-WTA 509

Length = 520

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 93.3 bits (232), Expect = 8e-23
 Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 18/206 (8%)

Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRTV 75
           G  AI ++ DV   + A  + ++T++ FG +D LVN AA   G  L     +  + ++  
Sbjct: 54  GGTAIAVQVDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKF 113

Query: 76  IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-YQIHVSAAKAA 134
           + ++  G  +      K++ K G        GG I+N S+T    A W Y      AK  
Sbjct: 114 MSVNLDGALVCTRAVYKHMAKRG--------GGAIVNQSST----AAWLYSNFYGLAKVG 161

Query: 135 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 194
           ++ +T+ LA E G    IRVN IAPGPI DT     + P+E  +     +   + G   D
Sbjct: 162 LNGLTQQLARELGG-MNIRVNAIAPGPI-DTEATRTVTPKEFVADMVKGIPLSRMGTPED 219

Query: 195 IAMAALYLASDAGKYVNGNTLIVDGG 220
           +    L+L SD   ++ G    VDGG
Sbjct: 220 LVGMCLFLLSDEASWITGQIFNVDGG 245

Length = 250

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 92.4 bits (230), Expect = 2e-22
 Identities = 63/230 (27%), Positives = 101/230 (43%), Gaps = 21/230 (9%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
              +    +A       G   I L  DV K ++   ++ +    FG LDILVN A    +
Sbjct: 32  DFGEEGAEAAAKVAGDAGGSVIYLPADVTKEDEIADMIAAAAAEFGGLDILVNNAGIQHV 91

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            P E+  P  +  +I +     F     AL ++KK G G+        IINI++     A
Sbjct: 92  APIEEFPPEDWDRIIAVMLTSAFHTIRAALPHMKKQGWGR--------IINIASAHGLVA 143

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
           + ++    AAK  +  +T+ LALE   ++ I VN I PG +  T  V K   ++ +++  
Sbjct: 144 SPFKSAYVAAKHGLIGLTKVLALE-VAEHGITVNAICPGYV-RTPLVEKQIADQAKTRGI 201

Query: 182 DY-----------MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                            +F    ++A  ALYLASDA   + G  +++DGG
Sbjct: 202 PEEQVIREVMLKGQPTKRFVTVDEVAETALYLASDAAAQITGQAIVLDGG 251

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 91.1 bits (227), Expect = 3e-22
 Identities = 62/216 (28%), Positives = 88/216 (40%), Gaps = 37/216 (17%)

Query: 20  IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRTV 75
           +PA  +  DV   ED   + E      GK+D LV++ A         P  D S  GF   
Sbjct: 44  LPADVIPLDVTSDEDIDELFEKVKEDGGKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKA 103

Query: 76  IEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAA 134
           ++I S  +FI +   A   + +GG   A S                       +  AKAA
Sbjct: 104 LDI-SAYSFISLAKAAKPLMNEGGSIVALSYIAAE----------RVFPGYGGMGVAKAA 152

Query: 135 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW- 193
           ++S+ R LA E G    IRVN I+ GP K TAG          S    +    ++ E+  
Sbjct: 153 LESLARYLAYELG-RKGIRVNTISAGPTKTTAG----------SGIGGFDKMVEYAEEMA 201

Query: 194 ---------DIAMAALYLASDAGKYVNGNTLIVDGG 220
                    ++A AA +L SD  + + G  L VDGG
Sbjct: 202 PLGRNASAEEVANAAAFLLSDLARGITGQILYVDGG 237

Length = 239

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 91.0 bits (226), Expect = 6e-22
 Identities = 65/216 (30%), Positives = 99/216 (45%), Gaps = 17/216 (7%)

Query: 11  AVAALHSLGIPAIG-LEGDVRKREDAVRVVESTINHFGKLDILVNAAA--GNFLVPAEDL 67
           AVAA   LG P I  +  DV    D    V++ +  FG+LDI+ N A   G       + 
Sbjct: 43  AVAA--ELGDPDISFVHCDVTVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILET 100

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
           S   F  V++++  G F+    A + +    +G         I+++++            
Sbjct: 101 SLEEFERVLDVNVYGAFLGTKHAARVMIPAKKGS--------IVSVASVAGVVGGLGPHA 152

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 187
            +A+K AV  +TRS A E G ++ IRVN ++P  +      +    E+   +     AA 
Sbjct: 153 YTASKHAVLGLTRSAATELG-EHGIRVNCVSPYGVATPLLTAGFGVEDEAIEEAVRGAAN 211

Query: 188 KFG---EKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             G      DIA A LYLASD  +YV+G  L+VDGG
Sbjct: 212 LKGTALRPEDIAAAVLYLASDDSRYVSGQNLVVDGG 247

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 91.0 bits (226), Expect = 6e-22
 Identities = 63/217 (29%), Positives = 96/217 (44%), Gaps = 15/217 (6%)

Query: 10  SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA-EDLS 68
           +A A +  +   A+ L  DV   +    + E  +  FG LD+LVN A    L PA  D  
Sbjct: 39  AAQAVVAQIAGGALALRVDVTDEQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAIIDTD 98

Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 128
              +   + I+  GTF+ C  A   +         +  GG I+N+S+    +        
Sbjct: 99  LAVWDQTMAINLRGTFLCCRHAAPRMI--------ARGGGSIVNLSSIAGQSGDPGYGAY 150

Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY- 187
            A+KAA+ ++TR+LA E      IR N +APG I     ++KLA  E       +     
Sbjct: 151 GASKAAIRNLTRTLAAELRHA-GIRCNALAPGLIDTPLLLAKLAGFEGALGPGGFHLLIH 209

Query: 188 ----KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
               + G   D+A A ++L SD   ++ G  L VDGG
Sbjct: 210 QLQGRLGRPEDVAAAVVFLLSDDASFITGQVLCVDGG 246

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 90.8 bits (226), Expect = 8e-22
 Identities = 68/223 (30%), Positives = 101/223 (45%), Gaps = 24/223 (10%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPA 64
           L  AVA   +LG    G   +V   ED           FG+L+ L+N A       LV A
Sbjct: 42  LEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKA 101

Query: 65  ED------LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 118
           +D      +S   F++VI+++  G F+   EA   + + G         G+IINIS+   
Sbjct: 102 KDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGS-------KGVIINISSIAR 154

Query: 119 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS 178
                 Q + SA+KA V ++T + A E    Y IRV  IAPG I+ T   + + P E   
Sbjct: 155 A-GNMGQTNYSASKAGVAAMTVTWAKELAR-YGIRVAAIAPGVIE-TEMTAAMKP-EALE 210

Query: 179 KATDYMAAYKFGEKWDIAMAALY-LASDAGKYVNGNTLIVDGG 220
           +    +   + GE  +IA    + + +D   YV G  L +DGG
Sbjct: 211 RLEKMIPVGRLGEPEEIAHTVRFIIEND---YVTGRVLEIDGG 250

Length = 253

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 90.5 bits (225), Expect = 9e-22
 Identities = 55/199 (27%), Positives = 100/199 (50%), Gaps = 10/199 (5%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           D+    +  + ++  I   G++D+LVN A      P  D+  + +R +  +D  G F+  
Sbjct: 60  DLSDLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCS 119

Query: 88  HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 147
             A +++ K G+       GG IINI++   +T        +AAK A+  +T+++ALE  
Sbjct: 120 QIAARHMVKQGQ-------GGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALEL- 171

Query: 148 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 207
            ++ I VN +APG I     ++ +   +++  +   +   + G+  +IA    +L S+  
Sbjct: 172 VEHGILVNAVAPGAI--ATPMNGMDDSDVKPDSRPGIPLGRPGDTHEIASLVAWLCSEGA 229

Query: 208 KYVNGNTLIVDGGNWLSNP 226
            Y  G +LIVDGG  L+NP
Sbjct: 230 SYTTGQSLIVDGGFMLANP 248

Length = 256

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 90.4 bits (225), Expect = 1e-21
 Identities = 69/223 (30%), Positives = 102/223 (45%), Gaps = 13/223 (5%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN-F 60
            RR+  L   VA + + G  A+ L GDVR    A  +V   +  FG LDI  N A     
Sbjct: 37  ARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGLDIAFNNAGTLGE 96

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
           + P  ++S  G+R  +  +    F+     +  +   G        GG +I  S  + +T
Sbjct: 97  MGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG--------GGSLIFTSTFVGHT 148

Query: 121 ATWYQIHVSAA-KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRS 178
           A +  +   AA KA +  +T+ LA E+G    IRVN + PG   DT     +    E  +
Sbjct: 149 AGFPGMAAYAASKAGLIGLTQVLAAEYGAQ-GIRVNALLPGGT-DTPMGRAMGDTPEALA 206

Query: 179 KATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN 221
                 A  +  +  +IA AAL+LASDA  +V G  L+VDGG 
Sbjct: 207 FVAGLHALKRMAQPEEIAQAALFLASDAASFVTGTALLVDGGV 249

Length = 254

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 90.3 bits (225), Expect = 1e-21
 Identities = 74/232 (31%), Positives = 102/232 (43%), Gaps = 37/232 (15%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
             +A  AL   G  AIG+  DV   E     ++  +  FG +DILVN A    + P ED 
Sbjct: 41  AAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDF 100

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
               ++ +I I   G F+    AL  +K  G        GG IIN+ A++H         
Sbjct: 101 PTEKWKKMIAIMLDGAFLTTKAALPIMKAQG--------GGRIINM-ASVHG-------L 144

Query: 128 V-SAAKAAVDS-------ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 179
           V SA KAA  S       +T+ +ALE G  + + VN I PG + DT  V K  P+  + +
Sbjct: 145 VGSAGKAAYVSAKHGLIGLTKVVALE-GATHGVTVNAICPGYV-DTPLVRKQIPDLAKER 202

Query: 180 ATDYMAAYK-----------FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                   +           F    +IA  AL+LAS A K V G   +VDGG
Sbjct: 203 GISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLASFAAKGVTGQAWVVDGG 254

Length = 258

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 89.6 bits (222), Expect = 2e-21
 Identities = 72/227 (31%), Positives = 101/227 (44%), Gaps = 19/227 (8%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
           L +A A    +G  A  +  DV  +    R V + ++ +G +DILVN AA   L P  D+
Sbjct: 37  LEAARATAAEIGPAACAISLDVTDQASIDRCVAALVDRWGSIDILVNNAALFDLAPIVDI 96

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
           +   +  +  I+  GT  M     + +   GR       GG IIN+++            
Sbjct: 97  TRESYDRLFAINVSGTLFMMQAVARAMIAQGR-------GGKIINMASQAGRRGEALVGV 149

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA---GV-SKLAPEEIR---SKA 180
             A KAAV S+T+S  L     + I VN IAPG + D     GV +K A  E R    K 
Sbjct: 150 YCATKAAVISLTQSAGLNL-IRHGINVNAIAPG-VVDGEHWDGVDAKFARYENRPRGEKK 207

Query: 181 TDYMAAYKFGEKW---DIAMAALYLASDAGKYVNGNTLIVDGGNWLS 224
                A  FG      D+   A++LAS    Y+   T  VDGGNW+S
Sbjct: 208 RLVGEAVPFGRMGRAEDLTGMAIFLASTDADYIVAQTYNVDGGNWMS 254

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 89.0 bits (221), Expect = 3e-21
 Identities = 65/213 (30%), Positives = 96/213 (45%), Gaps = 20/213 (9%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
           VA + + G  AI ++ DV       R+ ++    FG++D+LVN A    L    D     
Sbjct: 47  VAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLED 106

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS----ATLHYTATWYQIH 127
           F   I  +  G F++  EA ++L +GGR          IIN+S    A        Y   
Sbjct: 107 FDRTIATNLRGAFVVLREAARHLGQGGR----------IINLSTSVIALPLPGYGPY--- 153

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 187
            +A+KAAV+ +   LA E      I VN +APGP+      +  + E+I   A       
Sbjct: 154 -AASKAAVEGLVHVLANELRGR-GITVNAVAPGPVATELFFNGKSAEQIDQLA-GLAPLE 210

Query: 188 KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           + G   +IA A  +LA   G +VNG  L V+GG
Sbjct: 211 RLGTPEEIAAAVAFLAGPDGAWVNGQVLRVNGG 243

Length = 245

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 88.1 bits (219), Expect = 5e-21
 Identities = 56/199 (28%), Positives = 83/199 (41%), Gaps = 17/199 (8%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGN---FLVPAEDLSPNGFRTVIEIDSVGTF 84
           DV   E      +  I  FG++DIL+N A        + A  L P  +   I+++  G  
Sbjct: 57  DVTSWEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPP-WEKTIDVNLTGVI 115

Query: 85  IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
              + AL Y+ K   G      GG+I+NI +             SA+K  V   TRSLA 
Sbjct: 116 NTTYLALHYMDKNKGG-----KGGVIVNIGSVAGLYPAPQFPVYSASKHGVVGFTRSLAD 170

Query: 145 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 204
                  +RVN I PG   +T  +      ++ +K  + + +        +A A +YL  
Sbjct: 171 LLEYKTGVRVNAICPGFT-NTPLL-----PDLVAKEAEMLPSAPTQSPEVVAKAIVYLIE 224

Query: 205 DAGKYVNGNTLIVDGGNWL 223
           D  K  NG   IVDGG  +
Sbjct: 225 DDEK--NGAIWIVDGGKLI 241

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 88.5 bits (220), Expect = 6e-21
 Identities = 64/227 (28%), Positives = 102/227 (44%), Gaps = 22/227 (9%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVN-AAAGNFLVPAED 66
           L    A +  LG  A+ +  D+   +    +V   +  FG++D LVN A     + P  D
Sbjct: 42  LDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLAD 101

Query: 67  LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI-SATLHYTATWYQ 125
                +R VIE++ +GT  +       L +         SGG I+ I S  L ++   Y 
Sbjct: 102 ADFAHWRAVIELNVLGTLRLTQAFTPALAE---------SGGSIVMINSMVLRHSQPKYG 152

Query: 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG-----PIKD----TAGVSKLAPEEI 176
            +   AK A+ + ++SLA E G    IRVN +APG     P+K      AG   +  E+I
Sbjct: 153 AY-KMAKGALLAASQSLATELG-PQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQI 210

Query: 177 RSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 223
            ++        +     ++A A L+LASD  + + G TL V+ G + 
Sbjct: 211 YAETAANSDLKRLPTDDEVASAVLFLASDLARAITGQTLDVNCGEYH 257

Length = 258

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 88.0 bits (218), Expect = 8e-21
 Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 17/201 (8%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL---SPNGFRTVIEIDSVGTF 84
           D+ +++D   +V   +   G +DIL+N A    ++  +DL       +  VI I+    F
Sbjct: 63  DLIQQKDIDSIVSQAVEVMGHIDILINNAG---IIRRQDLLEFGNKDWDDVININQKTVF 119

Query: 85  IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
            +     K   K G       +GG IINI++ L +         +A+K+AV  +TR+LA 
Sbjct: 120 FLSQAVAKQFVKQG-------NGGKIINIASMLSFQGGIRVPSYTASKSAVMGLTRALAT 172

Query: 145 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT-DYMAAYKFGEKWDIAMAALYLA 203
           E  + Y I VN IAPG +  T   + L  +  R++A  + + A ++G   D+A  A++L+
Sbjct: 173 EL-SQYNINVNAIAPGYMA-TDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLS 230

Query: 204 SDAGKYVNGNTLIVDGGNWLS 224
           S A  YV G TL VDGG WL+
Sbjct: 231 SSASDYVTGYTLAVDGG-WLA 250

Length = 251

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 86.8 bits (215), Expect = 2e-20
 Identities = 54/193 (27%), Positives = 78/193 (40%), Gaps = 19/193 (9%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           D+   + A R V+     FG+LD LVN A         D   + +  +  ++   T    
Sbjct: 62  DLVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNAS 121

Query: 88  HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 147
             AL  L        ++S GG I+NI A     A       +AAKA V  +T +LA E  
Sbjct: 122 KAALPAL--------TASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELL 173

Query: 148 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 207
            D  I VN + P  I DT       P+   S         ++     IA    +L SD  
Sbjct: 174 -DRGITVNAVLPSII-DTPPNRADMPDADFS---------RWVTPEQIAAVIAFLLSDEA 222

Query: 208 KYVNGNTLIVDGG 220
           + + G ++ VDGG
Sbjct: 223 QAITGASIPVDGG 235

Length = 239

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 86.4 bits (214), Expect = 4e-20
 Identities = 52/198 (26%), Positives = 94/198 (47%), Gaps = 16/198 (8%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIM 86
           DV K ED   ++  T+  FG++D LVN A  +      ++ S   FR ++ ++ +  F+ 
Sbjct: 67  DVTKEEDIKTLISVTVERFGRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNLISYFLA 126

Query: 87  CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 146
              AL +L+K         S G IIN+S+ +            A K A+ ++T++LA++ 
Sbjct: 127 SKYALPHLRK---------SQGNIINLSSLVGSIGQKQAAPYVATKGAITAMTKALAVD- 176

Query: 147 GTDYAIRVNGIAPG----PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 202
            + Y +RVN I+PG    P+ +              +        + G + +  +AAL+L
Sbjct: 177 ESRYGVRVNCISPGNIWTPLWEELAAQTPDTLATIKEGELAQLLGRMGTEAESGLAALFL 236

Query: 203 ASDAGKYVNGNTLIVDGG 220
           A++A  +  G  L++ GG
Sbjct: 237 AAEA-TFCTGIDLLLSGG 253

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 85.7 bits (213), Expect = 4e-20
 Identities = 46/164 (28%), Positives = 72/164 (43%), Gaps = 18/164 (10%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
           R    L S    L+        LE DV   E     V+  I  FG++D+LVN A      
Sbjct: 32  RNPDKLESLGELLND---NLEVLELDVTDEESIKAAVKEVIERFGRIDVLVNNAGYGLFG 88

Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 122
           P E+ S    R + E++  G   +    L  ++K           G I+N+S+      T
Sbjct: 89  PLEETSIEEVRELFEVNVFGPLRVTRAFLPLMRK--------QGSGRIVNVSSVAGLVPT 140

Query: 123 WYQIHVSAAKAAVDSITRSLALE---WGTDYAIRVNGIAPGPIK 163
            +     A+KAA+++++ SL LE   +G    I+V  I PGP++
Sbjct: 141 PFLGPYCASKAALEALSESLRLELAPFG----IKVTIIEPGPVR 180

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 85.9 bits (213), Expect = 5e-20
 Identities = 51/174 (29%), Positives = 79/174 (45%), Gaps = 8/174 (4%)

Query: 47  GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSS 106
           G  D LVN A    L  A D++  GF  V+ +++ G  ++            R   ++  
Sbjct: 76  GAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHV-------ARAMIAAGR 128

Query: 107 GGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 166
           GG I+N+S+          +   A+KAA+D+ITR L +E G  + IRVN + P       
Sbjct: 129 GGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELG-PHGIRVNSVNPTVTLTPM 187

Query: 167 GVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                +  +        +   +F E  D+A   L+L SDA   V+G +L VDGG
Sbjct: 188 AAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDAASMVSGVSLPVDGG 241

Length = 245

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 85.8 bits (213), Expect = 5e-20
 Identities = 62/210 (29%), Positives = 95/210 (45%), Gaps = 27/210 (12%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81
           A  L+ D+   +    +V + +  FG+LD LVN A+  +  P   ++   +  +   +  
Sbjct: 59  AAALQADLLDPDALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLK 118

Query: 82  GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW----YQIHVSAAKAAVDS 137
             F +   A   L+K           G I+NI   +H  A      Y ++  AAKAA++ 
Sbjct: 119 APFFLSQAAAPQLRK---------QRGAIVNI-TDIH--AERPLKGYPVY-CAAKAALEM 165

Query: 138 ITRSLALEWGTDYAIRVNGIAPGPI---KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 194
           +TRSLALE   +  +RVN +APG I   +D         EE R          + G   D
Sbjct: 166 LTRSLALELAPE--VRVNAVAPGAILWPED----GNSFDEEARQAILARTPLKRIGTPED 219

Query: 195 IAMAALYLASDAGKYVNGNTLIVDGGNWLS 224
           IA A  +L +DA  ++ G  L VDGG  L+
Sbjct: 220 IAEAVRFLLADAS-FITGQILAVDGGRSLT 248

Length = 249

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 85.5 bits (212), Expect = 9e-20
 Identities = 57/190 (30%), Positives = 97/190 (51%), Gaps = 9/190 (4%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           DV        ++++ +   G+LD+LVN A      P  D++ + +  V+++   GTF   
Sbjct: 77  DVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRAT 136

Query: 88  HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 147
             AL+Y++   RG      GG+I+N ++ L + A   Q H +AAKA V ++TR  ALE  
Sbjct: 137 RAALRYMR--ARGH-----GGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRCSALE-A 188

Query: 148 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 207
            +Y +R+N +AP  I     ++K+   E+  +     A  +  E W++A    +LASD  
Sbjct: 189 AEYGVRINAVAPS-IAMHPFLAKVTSAELLDELAAREAFGRAAEPWEVANVIAFLASDYS 247

Query: 208 KYVNGNTLIV 217
            Y+ G  + V
Sbjct: 248 SYLTGEVVSV 257

Length = 262

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 86.8 bits (216), Expect = 2e-19
 Identities = 67/231 (29%), Positives = 95/231 (41%), Gaps = 34/231 (14%)

Query: 10  SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV-PAEDLS 68
            A AA       A+G+  DV          E     FG +DI+V+  AG  +  P E+ S
Sbjct: 460 EAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVS-NAGIAISGPIEETS 518

Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY---TATWYQ 125
              +R   ++++ G F++  EA++ +K  G G      G I+   S            Y 
Sbjct: 519 DEDWRRSFDVNATGHFLVAREAVRIMKAQGLG------GSIVFIASKNAVNPGPNFGAY- 571

Query: 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP------------GPIKDTAGVSKLAP 173
               AAKAA   + R LALE G D  IRVNG+ P              I+  A    L+ 
Sbjct: 572 ---GAAKAAELHLVRQLALELGPD-GIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSE 627

Query: 174 EEIRSKATDYMAAYKFGEKW---DIAMAALYLASDAGKYVNGNTLIVDGGN 221
           EE+      Y A      +    D+A A ++LAS       G  + VDGGN
Sbjct: 628 EEL---EEFYRARNLLKREVTPEDVAEAVVFLASGLLSKTTGAIITVDGGN 675

Length = 681

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 83.9 bits (208), Expect = 3e-19
 Identities = 63/214 (29%), Positives = 95/214 (44%), Gaps = 19/214 (8%)

Query: 13  AALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL-VNAAAGNFLVPAEDLSPNG 71
           AA   LG  A+ +  D         + ++    FG+LD + +NA    F  P ED     
Sbjct: 45  AARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAVFINAGVAKFA-PLEDWDEAM 103

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 131
           F      +  G + +    L  L       AS     I++N S   H       ++ +A+
Sbjct: 104 FDRSFNTNVKGPYFLIQALLPLLANP----AS-----IVLNGSINAHIGMPNSSVY-AAS 153

Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAY--- 187
           KAA+ S+ ++L+ E      IRVN ++PGP+  T    KL  PE         + A    
Sbjct: 154 KAALLSLAKTLSGEL-LPRGIRVNAVSPGPV-QTPLYGKLGLPEATLDAVAAQIQALVPL 211

Query: 188 -KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            +FG   +IA A LYLASD   ++ G+ +IVDGG
Sbjct: 212 GRFGTPEEIAKAVLYLASDESAFIVGSEIIVDGG 245

Length = 249

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 83.6 bits (207), Expect = 3e-19
 Identities = 70/228 (30%), Positives = 102/228 (44%), Gaps = 37/228 (16%)

Query: 10  SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK-LDILVNAAAGNFLV------ 62
           +A A    LG  AI L+ DV  RE    +  +   HFGK +  +VN A  +F        
Sbjct: 42  AAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARK 101

Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 122
            A+D++   F+  +E    G       AL  +++ G G+        IINI   L     
Sbjct: 102 KADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGR--------IINIGTNL----- 148

Query: 123 WYQIHV------SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI 176
            +Q  V      + AKAA+  +TR+LA E G  Y I VN ++ G ++ T   S   P+E+
Sbjct: 149 -FQNPVVPYHDYTTAKAALLGLTRNLAAELG-PYGITVNMVSGGLLRTT-DASAATPDEV 205

Query: 177 RSKATDYMAA----YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                D +AA     K     + A A L+ AS   + V G  L+VDGG
Sbjct: 206 ----FDLIAATTPLRKVTTPQEFADAVLFFASPWARAVTGQNLVVDGG 249

Length = 253

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 82.9 bits (205), Expect = 6e-19
 Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 10/201 (4%)

Query: 23  IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 82
           I +  D+   E    +V        +LD+LVN A   +  P E    +G+  V++I+   
Sbjct: 57  IAIPADLSSEEGIEALVARVAERSDRLDVLVNNAGATWGAPLEAFPESGWDKVMDINVKS 116

Query: 83  TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV-SAAKAAVDSITRS 141
            F +    L  L+     +  +     +INI +      +  + +   A+KAAV  +TR 
Sbjct: 117 VFFLTQALLPLLRAAATAENPAR----VINIGSIAGIVVSGLENYSYGASKAAVHQLTRK 172

Query: 142 LALEWGTDYAIRVNGIAPGPI--KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 199
           LA E   ++ I VN IAPG    K TA +               +   ++G   D+A  A
Sbjct: 173 LAKELAGEH-ITVNAIAPGRFPSKMTAFLLN--DPAALEAEEKSIPLGRWGRPEDMAGLA 229

Query: 200 LYLASDAGKYVNGNTLIVDGG 220
           + LAS AG Y+ G  + VDGG
Sbjct: 230 IMLASRAGAYLTGAVIPVDGG 250

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 82.5 bits (204), Expect = 9e-19
 Identities = 61/204 (29%), Positives = 91/204 (44%), Gaps = 14/204 (6%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81
           A     DV        ++    +  G L +LVN A        E +  + +R V+ I+  
Sbjct: 53  AFAAVQDVTDEAQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVE 112

Query: 82  GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 141
             F+ C  AL YL+              I+NIS+   + A       +A+KAAV S+T+S
Sbjct: 113 SIFLGCKHALPYLRASQPAS--------IVNISSVAAFKAEPDYTAYNASKAAVASLTKS 164

Query: 142 LALEWG-TDYAIRVNGIAPGPIKDT---AGVSK-LAPEEIRSKATDYMAAYKFGEKWDIA 196
           +AL+       +R N I P  I  T     + + L  EE   K    +   + GE  D+A
Sbjct: 165 IALDCARRGLDVRCNSIHPTFI-RTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVA 223

Query: 197 MAALYLASDAGKYVNGNTLIVDGG 220
            A LYLASD  ++V G  L++DGG
Sbjct: 224 HAVLYLASDESRFVTGAELVIDGG 247

Length = 251

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 82.1 bits (203), Expect = 1e-18
 Identities = 67/225 (29%), Positives = 101/225 (44%), Gaps = 19/225 (8%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
           R +    + V A+   G  A+ +  DV    D +R+ E+     G+LD LVN A    L 
Sbjct: 35  RNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRLDALVNNAG--ILE 92

Query: 63  PA---EDLSPNGFRTVIEIDSVGTFIMCHEALKYL--KKGGRGQASSSSGGIIINISATL 117
                E +       +   + VG+F+   EA+K +  + GGR       GG I+N+S+  
Sbjct: 93  AQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGR-------GGAIVNVSSMA 145

Query: 118 -HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI 176
               +    I  +A+K A+D++T  LA E   +  IRVN + PG I      S   P  +
Sbjct: 146 ARLGSPGEYIDYAASKGAIDTMTIGLAKEVAAE-GIRVNAVRPGVIYTEIHASGGEPGRV 204

Query: 177 -RSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            R KA   M   + G   ++A A L+L SD   Y  G  + V GG
Sbjct: 205 DRVKAGIPMG--RGGTAEEVARAILWLLSDEASYTTGTFIDVSGG 247

Length = 248

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 82.2 bits (203), Expect = 1e-18
 Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 25/208 (12%)

Query: 25  LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 84
            + DV  +E  ++ ++  I+ +G++DILVN A          +  + +  +I ++  G F
Sbjct: 49  FKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIF 108

Query: 85  IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
           +M    + Y+ K           G+IINI++   +  T        +K AV  +TRS+A+
Sbjct: 109 LMSKYTIPYMLKQD--------KGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAV 160

Query: 145 EWGTDYA--IRVNGIAPGPIKDTAGVSKLA-------PEEIRSKATDYMAAY---KFGEK 192
               DYA  IR   + PG I  T  +   A       PE +  K  ++   +   + G+ 
Sbjct: 161 ----DYAPTIRCVAVCPGSI-RTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKP 215

Query: 193 WDIAMAALYLASDAGKYVNGNTLIVDGG 220
            ++A    +LASD   ++ G  + VDGG
Sbjct: 216 EEVAYVVAFLASDLASFITGECVTVDGG 243

Length = 258

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 81.9 bits (203), Expect = 1e-18
 Identities = 63/230 (27%), Positives = 101/230 (43%), Gaps = 25/230 (10%)

Query: 4   RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN-FLV 62
           R  ++    A L + G  A+ L  D+     A   + + +  FG++D+L+N   G  +  
Sbjct: 40  RSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAK 99

Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 122
           P E+         I      T   C   L ++   G        GG I+N+S+    T  
Sbjct: 100 PFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG--------GGAIVNVSSIA--TRG 149

Query: 123 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG---------PIKDTAGVS---K 170
             ++  SAAK  V+++T SLA E+  ++ IRVN +APG         P ++ A  S   K
Sbjct: 150 INRVPYSAAKGGVNALTASLAFEYA-EHGIRVNAVAPGGTEAPPRRVP-RNAAPQSEQEK 207

Query: 171 LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
              ++I  +  D     ++G   +   A L+LASD   Y+ G  L V GG
Sbjct: 208 AWYQQIVDQTLDSSLMKRYGTIDEQVAAILFLASDEASYITGTVLPVGGG 257

Length = 260

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 81.0 bits (200), Expect = 3e-18
 Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 17/214 (7%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
           AVA L   GI A     +V  +++    +E      G +D+L+N A      P  +    
Sbjct: 49  AVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQ 108

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI----SATLHYTATWYQI 126
            +  VI ++    F++     +Y+ K   G+        IINI    S     T T Y  
Sbjct: 109 EWNDVIAVNQTAVFLVSQAVARYMVKRQAGK--------IINICSMQSELGRDTITPY-- 158

Query: 127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA 186
             +A+K AV  +TR + +E    + I+VNGIAPG  K     + +  E   +       A
Sbjct: 159 --AASKGAVKMLTRGMCVELAR-HNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPA 215

Query: 187 YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            ++G+  ++  AA++L+S A  +VNG+ L VDGG
Sbjct: 216 ARWGDPQELIGAAVFLSSKASDFVNGHLLFVDGG 249

Length = 254

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 80.7 bits (200), Expect = 3e-18
 Identities = 62/226 (27%), Positives = 89/226 (39%), Gaps = 51/226 (22%)

Query: 17  SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLS 68
            LG  A+ L  DV   E+   +       +GKLD LV++ A        G FL    D S
Sbjct: 49  RLGESALVLPCDVSNDEEIKELFAEVKKDWGKLDGLVHSIAFAPKVQLKGPFL----DTS 104

Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH- 127
             GF   ++I +     +   AL  +  GG          I+     TL Y  +   +  
Sbjct: 105 RKGFLKALDISAYSLVSLAKAALPIMNPGG---------SIV-----TLSYLGSERVVPG 150

Query: 128 ---VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM 184
              +  AKAA++S  R LA E G    IRVN I+ GPIK  A           S  T + 
Sbjct: 151 YNVMGVAKAALESSVRYLAYELG-RKGIRVNAISAGPIKTLAA----------SGITGFD 199

Query: 185 AAYKFGEKW----------DIAMAALYLASDAGKYVNGNTLIVDGG 220
              ++ E+           ++   A +L SD    + G  + VDGG
Sbjct: 200 KMLEYSEQRAPLGRNVTAEEVGNTAAFLLSDLSSGITGEIIYVDGG 245

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 80.6 bits (199), Expect = 6e-18
 Identities = 67/214 (31%), Positives = 105/214 (49%), Gaps = 38/214 (17%)

Query: 27  GDVRKREDAVRVVESTINHFGKLDILVNAA--AGNFLVPAEDLSPNGFRTVIEIDSVGTF 84
            DV   +D  R V+ T++ FG LDI+VN A   G       ++  + F  V +++  G F
Sbjct: 73  CDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVF 132

Query: 85  I-MCHEA--LKYLKKG---GRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSI 138
           + M H A  +  LKKG        +S+ GG+         YT +         K AV  +
Sbjct: 133 LGMKHAARIMIPLKKGSIVSLCSVASAIGGL-----GPHAYTGS---------KHAVLGL 178

Query: 139 TRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-FGEKW---- 193
           TRS+A E G  + IRVN ++P  +     ++ L PE+ R++  D +A ++ F  K     
Sbjct: 179 TRSVAAELG-KHGIRVNCVSPYAVPTALALAHL-PEDERTE--DALAGFRAFAGKNANLK 234

Query: 194 -------DIAMAALYLASDAGKYVNGNTLIVDGG 220
                  D+A A L+LASD  +Y++G  L++DGG
Sbjct: 235 GVELTVDDVANAVLFLASDEARYISGLNLMIDGG 268

Length = 280

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 79.7 bits (197), Expect = 7e-18
 Identities = 58/187 (31%), Positives = 87/187 (46%), Gaps = 25/187 (13%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGN 59
             R +  L  A A L++ G   +GL  DVR   D  R V++ +  FG LD+L+ NA  G+
Sbjct: 36  TARDQKELEEAAAELNNKG-NVLGLAADVRDEADVQRAVDAIVAAFGGLDVLIANAGVGH 94

Query: 60  FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 119
           F  P E+L+P  +R VI+ +  G F     A+  LK+G         GG IINIS+    
Sbjct: 95  F-APVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRG---------GGYIINISSLAGT 144

Query: 120 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG----------PIKDTAGVS 169
                    +A+K  +   + +  L+    Y I+V+ I PG          P +  A   
Sbjct: 145 NFFAGGAAYNASKFGLVGFSEAAMLDL-RQYGIKVSTIMPGSVATHFNGHTPSEKDAW-- 201

Query: 170 KLAPEEI 176
           K+ PE+I
Sbjct: 202 KIQPEDI 208

Length = 237

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 79.7 bits (197), Expect = 8e-18
 Identities = 63/221 (28%), Positives = 93/221 (42%), Gaps = 22/221 (9%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
           VA     G  A+G++ DV          E  +  FG LDI+V+ A      P  + S   
Sbjct: 41  VAEAAQGGPRALGVQCDVTSEAQVQSAFEQAVLEFGGLDIVVSNAGIATSSPIAETSLED 100

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT---ATWYQIHV 128
           +   ++I+  G F++  EA + +K  G G      G I+ N S         A  Y    
Sbjct: 101 WNRSMDINLTGHFLVSREAFRIMKSQGIG------GNIVFNASKNAVAPGPNAAAY---- 150

Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD-----Y 183
           SAAKAA   + R LALE G +  IRVN + P  +   + + +      R+KA       Y
Sbjct: 151 SAAKAAEAHLARCLALEGG-EDGIRVNTVNPDAVFRGSKIWEGVWRAARAKAYGLLEEEY 209

Query: 184 MAAYKFGEK---WDIAMAALYLASDAGKYVNGNTLIVDGGN 221
                   +    D+A A + +AS+      G  + VDGGN
Sbjct: 210 RTRNLLKREVLPEDVAEAVVAMASEDFGKTTGAIVTVDGGN 250

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 79.4 bits (196), Expect = 1e-17
 Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 9/219 (4%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
           GR    L +A  +L   G+ A  L  DV   +     +++     G +DILVN A   F 
Sbjct: 41  GRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFR 100

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            P ED   + F  ++  +    F +     +++   G G+        IINI++     A
Sbjct: 101 TPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGK--------IINIASVQSALA 152

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
                  +A K AV ++T+ +A +W   + ++ N IAPG        + +A  E  +   
Sbjct: 153 RPGIAPYTATKGAVGNLTKGMATDWAK-HGLQCNAIAPGYFDTPLNAALVADPEFSAWLE 211

Query: 182 DYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
               A ++G+  ++  A ++LASDA  +VNG+ L VDGG
Sbjct: 212 KRTPAGRWGKVEELVGACVFLASDASSFVNGHVLYVDGG 250

Length = 255

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 79.3 bits (196), Expect = 1e-17
 Identities = 60/224 (26%), Positives = 94/224 (41%), Gaps = 23/224 (10%)

Query: 7   VLRSAVAALHSLGIPA--IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVP 63
           +   A AA+      A  + +  DV         V +    FG LD+LVN A  N F  P
Sbjct: 43  LAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADP 102

Query: 64  AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 123
              ++   +R    +D  G +  C   L  + + GRG         I+NI++T  +    
Sbjct: 103 LA-MTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGS--------IVNIASTHAFKIIP 153

Query: 124 YQIHVSAAKAAVDSITRSLALEWGTDYA---IRVNGIAPGPIKDTAGVSKLA----PEEI 176
                  AK  +  +TR+L +E    YA   +RVN IAPG I+             P   
Sbjct: 154 GCFPYPVAKHGLLGLTRALGIE----YAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAA 209

Query: 177 RSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           R++        + G   ++AM A++LASD   ++N   + +DGG
Sbjct: 210 RAETLALQPMKRIGRPEEVAMTAVFLASDEAPFINATCITIDGG 253

Length = 260

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 79.4 bits (196), Expect = 1e-17
 Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 23/224 (10%)

Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS 68
           ++A   L   G  AI ++ DV  R+     V   ++ FG L+++VN A      P E ++
Sbjct: 40  QAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETIT 99

Query: 69  PNGFRTVIEIDSVGTFI---MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 125
              F  V  I+  G         EA K L  GG+   ++S  G++ N    ++       
Sbjct: 100 EEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVY------- 152

Query: 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK-----DTA-GVSKLA--PEEIR 177
              S+ K AV  +T++ A +  ++  I VN  APG +K     D A  V + A  P+E  
Sbjct: 153 ---SSTKFAVRGLTQTAARDLASE-GITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWG 208

Query: 178 SKA-TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            +     +   +  E  D+A    +LA     Y+ G T+IVDGG
Sbjct: 209 MEQFAKDITLGRLSEPEDVANCVSFLAGPDSDYITGQTIIVDGG 252

Length = 256

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 79.0 bits (195), Expect = 2e-17
 Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 11/174 (6%)

Query: 10  SAVAALHSLGIPAIGLEGDVRKREDAVR-VVESTINHFGKLDILVNAAAGNFLVPAEDLS 68
                + + G  A+ +  DVR  ED VR +VE+T++ FG+LDILVN A   +L   ED  
Sbjct: 54  ETAEEIEAAGGQALPIVVDVRD-EDQVRALVEATVDQFGRLDILVNNAGAIWLSLVEDTP 112

Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 128
              F  +  ++  GT+++   AL ++ K G+G         I+NIS  L        +  
Sbjct: 113 AKRFDLMQRVNLRGTYLLSQAALPHMVKAGQGH--------ILNISPPLSLRPARGDVAY 164

Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD 182
           +A KA +  +T  LA E    + I VN + P    +T   ++L+     ++A  
Sbjct: 165 AAGKAGMSRLTLGLAAELR-RHGIAVNSLWPSTAIETPAATELSGGSDPARARS 217

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 78.1 bits (193), Expect = 2e-17
 Identities = 52/210 (24%), Positives = 84/210 (40%), Gaps = 16/210 (7%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
               L++L   A+ ++ D+        +V +    FG+ D+LVN A+  +  P    S +
Sbjct: 41  LKDELNALRNSAVLVQADLSDFAACADLVAAAFRAFGRCDVLVNNASAFYPTPLGQGSED 100

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            +  +  I+    +++     + L     G         IINI   +             
Sbjct: 101 AWAELFGINLKAPYLLIQAFARRLAGSRNGS--------IINIIDAMTDRPLTGYFAYCM 152

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 190
           +KAA++ +TRS ALE   +  IRVNGIAPG I     +     E    K           
Sbjct: 153 SKAALEGLTRSAALELAPN--IRVNGIAPGLILLPEDMDAEYRENALRKVPLKRR----P 206

Query: 191 EKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
              +IA A ++L      Y+ G  + VDGG
Sbjct: 207 SAEEIADAVIFLLDS--NYITGQIIKVDGG 234

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 77.9 bits (192), Expect = 4e-17
 Identities = 55/196 (28%), Positives = 90/196 (45%), Gaps = 11/196 (5%)

Query: 25  LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 84
           +EGDV   E     V       G +D+LVN A        + ++   +  VI+ +    F
Sbjct: 55  VEGDVSSFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVF 114

Query: 85  IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
            +    +  +++ G G+        IINIS+       + Q + SAAKA +   T++LA 
Sbjct: 115 NVTQPVIDGMRERGWGR--------IINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQ 166

Query: 145 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 204
           E G    + VN I+PG I  T  V  +  E++ +     +   + G   +IA A  +LAS
Sbjct: 167 E-GATKGVTVNTISPGYI-ATDMVMAM-REDVLNSIVAQIPVGRLGRPEEIAAAVAFLAS 223

Query: 205 DAGKYVNGNTLIVDGG 220
           +   Y+ G TL ++GG
Sbjct: 224 EEAGYITGATLSINGG 239

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 77.0 bits (190), Expect = 1e-16
 Identities = 65/236 (27%), Positives = 103/236 (43%), Gaps = 33/236 (13%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA---- 57
           GR      +  A L +LG  A+ ++ D+   ED  RVV +    FG+LD LVNAA     
Sbjct: 38  GRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDR 97

Query: 58  GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 117
           G  L    D SP  F     ++    F +  EA+K +++  R        G I+NI +  
Sbjct: 98  GTIL----DTSPELFDRHFAVNVRAPFFLMQEAIKLMRR--RKAE-----GTIVNIGSMS 146

Query: 118 HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA-----IRVNGIAPGPIKDTAGVSKL- 171
            +    +     A+K A+ ++TR+ A      YA     IRVNG+  G +  T G  ++ 
Sbjct: 147 AHGGQPFLAAYCASKGALATLTRNAA------YALLRNRIRVNGLNIGWM-ATEGEDRIQ 199

Query: 172 -----APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW 222
                AP++   KA       +  +  ++A A  +L SD    + G+ +  D   W
Sbjct: 200 REFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFLLSDESGLMTGSVIDFDQSVW 255

Length = 260

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 76.7 bits (189), Expect = 1e-16
 Identities = 51/215 (23%), Positives = 90/215 (41%), Gaps = 17/215 (7%)

Query: 15  LHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRT 74
           ++  G  A+  + DV  ++     ++     FG  D++VN A    + P  +++    + 
Sbjct: 44  INQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKK 103

Query: 75  VIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAA 134
           V  ++  G       A +  KK G        GG IIN ++   +         S+ K A
Sbjct: 104 VYNVNVKGVLFGIQAAARQFKKQG-------HGGKIINAASIAGHEGNPILSAYSSTKFA 156

Query: 135 VDSITRSLALEWGTDYAIRVNGIAPGPIKDT------AGVSKLAPEEIRSKATDYMAAYK 188
           V  +T++ A E      I VN   PG +K           S++A + I     ++ +   
Sbjct: 157 VRGLTQTAAQELAPKG-ITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIA 215

Query: 189 FG---EKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            G   E  D+A    +LAS+   Y+ G +++VDGG
Sbjct: 216 LGRPSEPEDVAGLVSFLASEDSDYITGQSILVDGG 250

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 76.8 bits (189), Expect = 1e-16
 Identities = 62/205 (30%), Positives = 94/205 (45%), Gaps = 26/205 (12%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVN-AAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 86
           DV         V++T+  FG++D   N A         ED   + F  V+ I+  G F  
Sbjct: 62  DVSDEAQVEAYVDATVEQFGRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRGVFYG 121

Query: 87  CHEALKYLKKGGRGQA--SSSSGGI--IINISATLHYTATWYQIHVSAAKAAVDSITRSL 142
             + LK +++ G G    ++S GGI  + N            Q   +AAK  V  +TR+ 
Sbjct: 122 LEKVLKVMREQGSGMIVNTASVGGIRGVGN------------QSGYAAAKHGVVGLTRNS 169

Query: 143 ALEWGTDYAIRVNGIAPGPIKDTAGVS----KLAPEEIRSKATDYMA---AYKFGEKWDI 195
           A+E+G  Y IR+N IAPG I  T  V     +L PE       ++++     +FGE  ++
Sbjct: 170 AVEYG-QYGIRINAIAPGAIL-TPMVEGSLKQLGPENPEEAGEEFVSVNPMKRFGEPEEV 227

Query: 196 AMAALYLASDAGKYVNGNTLIVDGG 220
           A    +L SD   YVN   + +DGG
Sbjct: 228 AAVVAFLLSDDAGYVNAAVVPIDGG 252

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 76.7 bits (189), Expect = 1e-16
 Identities = 62/227 (27%), Positives = 94/227 (41%), Gaps = 29/227 (12%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKR---EDAVRVVESTINHFGKLDILVNAAAGNFLVPA 64
           +R+ +AA H  G+  +    D+ K    ED V   +     FG +DILVN A    + P 
Sbjct: 43  VRAGLAAKH--GVKVLYHGADLSKPAAIEDMVAYAQRQ---FGGVDILVNNAGIQHVAPI 97

Query: 65  EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 124
           ED     +  +I ++    F     AL ++KK G G+        IINI++     A+  
Sbjct: 98  EDFPTEKWDAIIALNLSAVFHTTRLALPHMKKQGWGR--------IINIASVHGLVASAN 149

Query: 125 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM 184
           +    AAK  V  +T+ +ALE      +  N I PG +  T  V K      +       
Sbjct: 150 KSAYVAAKHGVVGLTKVVALE-TAGTGVTCNAICPGWV-LTPLVEKQISALAQKNGVPQE 207

Query: 185 AAY-----------KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            A            +F     +   A++LASDA   + G  + VDGG
Sbjct: 208 QAARELLLEKQPSKQFVTPEQLGDTAVFLASDAASQITGTAVSVDGG 254

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 75.6 bits (186), Expect = 3e-16
 Identities = 51/186 (27%), Positives = 80/186 (43%), Gaps = 8/186 (4%)

Query: 39  VESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG 98
            E  +   G +D+LVN AA   L P  +++   F    +++      +     + +   G
Sbjct: 67  TEEALGSVGPVDLLVNNAAVAILQPFLEVTKEAFDRSFDVNVRAVIHVSQIVARGMIARG 126

Query: 99  RGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA 158
                    G I+N+S+     A        + KAA+D +T+ +ALE G  + IRVN + 
Sbjct: 127 -------VPGSIVNVSSQASQRALTNHTVYCSTKAALDMLTKVMALELGP-HKIRVNSVN 178

Query: 159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVD 218
           P  +    G    +  E   K  + +   KF E  D+  A L+L SD      G+TL VD
Sbjct: 179 PTVVMTDMGRDNWSDPEKAKKMLNRIPLGKFAEVEDVVNAILFLLSDKSSMTTGSTLPVD 238

Query: 219 GGNWLS 224
           GG   S
Sbjct: 239 GGFLAS 244

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 75.7 bits (186), Expect = 3e-16
 Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 10/219 (4%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFL 61
           R++  +  AVA L   G+   G    V K ED  R+V + +N  G +DILV NAA   F 
Sbjct: 42  RKQQNVDRAVATLQGEGLSVTGTVCHVGKAEDRERLVATAVNLHGGVDILVSNAAVNPFF 101

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
               D +   +  +++++   T +M    +  ++K G        GG ++ +S+   +  
Sbjct: 102 GNILDSTEEVWDKILDVNVKATALMTKAVVPEMEKRG--------GGSVVIVSSVAAFHP 153

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
                  + +K A+  +T++LA E      IRVN +APG IK +   +    + +     
Sbjct: 154 FPGLGPYNVSKTALLGLTKNLAPELAPR-NIRVNCLAPGLIKTSFSSALWMDKAVEESMK 212

Query: 182 DYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           + +   + G+  D A    +L S+   Y+ G T++V GG
Sbjct: 213 ETLRIRRLGQPEDCAGIVSFLCSEDASYITGETVVVGGG 251

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 75.2 bits (185), Expect = 3e-16
 Identities = 52/201 (25%), Positives = 99/201 (49%), Gaps = 21/201 (10%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS-----PNGFRTVIEIDSVG 82
           DV   +    + ++    +G +DI  N A    + P ED S      + ++ V +++   
Sbjct: 59  DVTDEDAVNALFDTAAETYGSVDIAFNNAG---ISPPEDDSILNTGLDAWQRVQDVNLTS 115

Query: 83  TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 142
            ++ C  AL ++ + G+G   +++  + +  SAT        QI  +A+K  V +++R L
Sbjct: 116 VYLCCKAALPHMVRQGKGSIINTASFVAVMGSAT-------SQISYTASKGGVLAMSREL 168

Query: 143 ALEWGTDYAIRVNGIAPGPIKDTAGVSKL---APEEIRSKATDYMAAYKFGEKWDIAMAA 199
            +++     IRVN + PGP+ +T  + +L    PE    +   ++   +F E  +IA A 
Sbjct: 169 GVQFARQ-GIRVNALCPGPV-NTPLLQELFAKDPERAARRLV-HVPMGRFAEPEEIAAAV 225

Query: 200 LYLASDAGKYVNGNTLIVDGG 220
            +LASD   ++  +T +VDGG
Sbjct: 226 AFLASDDASFITASTFLVDGG 246

Length = 255

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 74.9 bits (184), Expect = 4e-16
 Identities = 53/203 (26%), Positives = 86/203 (42%), Gaps = 12/203 (5%)

Query: 18  LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIE 77
            G     + GDV        VV + +   G++D+LVN AA         L    +  ++ 
Sbjct: 45  EGPNLFFVHGDVADETLVKFVVYAMLEKLGRIDVLVNNAARGSKGILSSLLLEEWDRILS 104

Query: 78  IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDS 137
           ++  G + +       L K           G IINI++T  + +       +A+K  + +
Sbjct: 105 VNLTGPYELSRYCRDELIKNK---------GRIINIASTRAFQSEPDSEAYAASKGGLVA 155

Query: 138 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 197
           +T +LA+  G D  IRVN I+PG I +T    +     +  +      A + G   DIA 
Sbjct: 156 LTHALAMSLGPD--IRVNCISPGWI-NTTEQQEFTAAPLTQEDHAQHPAGRVGTPKDIAN 212

Query: 198 AALYLASDAGKYVNGNTLIVDGG 220
             L+L      ++ G T IVDGG
Sbjct: 213 LVLFLCQQDAGFITGETFIVDGG 235

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 74.4 bits (183), Expect = 7e-16
 Identities = 57/200 (28%), Positives = 85/200 (42%), Gaps = 19/200 (9%)

Query: 25  LEGDVRKREDAVRVVESTINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRTVIEIDS 80
            E DV   E+    +       G +DILVN A       F      +S   +  VI  + 
Sbjct: 57  KELDVTDTEECAEALAEIEEEEGPVDILVNNAGITRDSVFK----RMSHQEWNDVINTNL 112

Query: 81  VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITR 140
              F +       + + G         G IINIS+       + Q + SAAKA +   T+
Sbjct: 113 NSVFNVTQPLFAAMCEQG--------YGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTK 164

Query: 141 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 200
           +LA E G  Y I VN IAPG I  T  V +    E+     + +   + G   +IA A  
Sbjct: 165 ALASE-GARYGITVNCIAPGYIA-TPMVEQ-MGPEVLQSIVNQIPMKRLGTPEEIAAAVA 221

Query: 201 YLASDAGKYVNGNTLIVDGG 220
           +L S+A  ++ G T+ ++GG
Sbjct: 222 FLVSEAAGFITGETISINGG 241

Length = 245

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 74.4 bits (183), Expect = 7e-16
 Identities = 58/222 (26%), Positives = 94/222 (42%), Gaps = 13/222 (5%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVN-AAAGNF 60
            R        VA +   G  A+ +  DV +  +   +VE TI  +G+LD   N A     
Sbjct: 38  DRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIE 97

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHY 119
                + S   F  ++ ++  G ++ M ++    L +GG         G I+N ++    
Sbjct: 98  QGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGG---------GAIVNTASVAGL 148

Query: 120 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK-DTAGVSKLAPEEIRS 178
            A       +A+K AV  +T+S A+E+     IRVN + P  I  D    +  A      
Sbjct: 149 GAAPKMSIYAASKHAVIGLTKSAAIEYAKK-GIRVNAVCPAVIDTDMFRRAYEADPRKAE 207

Query: 179 KATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            A       + G+  ++A A LYL SD   +  G+ L+VDGG
Sbjct: 208 FAAAMHPVGRIGKVEEVASAVLYLCSDGASFTTGHALMVDGG 249

Length = 253

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 74.8 bits (184), Expect = 7e-16
 Identities = 64/225 (28%), Positives = 98/225 (43%), Gaps = 27/225 (12%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA-----AGNFLV 62
           +   V  + S G  A     D+   +            FG++D+L N A     AG    
Sbjct: 42  VSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHE 101

Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 122
              D+    F  ++ +D  GTF+M    L  + +          GG IIN S+     A 
Sbjct: 102 YPVDV----FDKIMAVDMRGTFLMTKMLLPLMME---------QGGSIINTSSFSGQAAD 148

Query: 123 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD 182
            Y+   +AAK AV + T+S+A+E+G D  IR N IAPG I +T  V KL           
Sbjct: 149 LYRSGYNAAKGAVINFTKSIAIEYGRD-GIRANAIAPGTI-ETPLVDKLTGTSEDEAGKT 206

Query: 183 YMAAYKF-------GEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           +    K+       G+  ++A   ++LASD   ++ G T+ +DGG
Sbjct: 207 FRENQKWMTPLGRLGKPEEVAKLVVFLASDDSSFITGETIRIDGG 251

Length = 272

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 74.2 bits (183), Expect = 1e-15
 Identities = 57/224 (25%), Positives = 86/224 (38%), Gaps = 55/224 (24%)

Query: 21  PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGF 72
             + L  DV   E    +  +    +GKLD LV++ A        G++L    D S  GF
Sbjct: 57  SDLVLPCDVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYL----DTSREGF 112

Query: 73  RTVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-----YQI 126
              ++I S  +F  +   A   +  GG          I+     TL Y  +      Y +
Sbjct: 113 LIAMDI-SAYSFTALAKAARPLMNNGG---------SIL-----TLTYLGSERVVPNYNV 157

Query: 127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA 186
            +  AKAA+++  R LA + G    IRVN I+ GPI+  A           S   D+   
Sbjct: 158 -MGVAKAALEASVRYLAADLG-KEGIRVNAISAGPIRTLAA----------SGIGDFRKM 205

Query: 187 YKFGEKW----------DIAMAALYLASDAGKYVNGNTLIVDGG 220
            K  E            ++   A +L SD    + G  + VD G
Sbjct: 206 LKENEANAPLRRNVTIEEVGNTAAFLLSDLSSGITGEIIYVDSG 249

Length = 259

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 73.9 bits (182), Expect = 1e-15
 Identities = 54/209 (25%), Positives = 87/209 (41%), Gaps = 28/209 (13%)

Query: 25  LEGDVRKREDAVRVVESTINHFGKLDILVNAA---AGNFLVPAEDLSPNGFRTVIEIDSV 81
           +E D+  +E     +  +   +GK+D  VN A     ++     D+S + F   + +   
Sbjct: 60  VELDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLG 119

Query: 82  GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL--------HYTATWYQ--IHVSAA 131
            +F+   +  KY KK G        GG ++NIS+           Y  T     +  +A 
Sbjct: 120 SSFLFSQQFAKYFKKQG--------GGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAI 171

Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 191
           KA +  +T+ LA  +  D  IRVN ++PG I D        PE   +            +
Sbjct: 172 KAGIIHLTKYLAKYFK-DSNIRVNCVSPGGILDNQ------PEAFLNAYKKCCNGKGMLD 224

Query: 192 KWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             DI    ++L SD  KY+ G  +IVD G
Sbjct: 225 PDDICGTLVFLLSDQSKYITGQNIIVDDG 253

Length = 256

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 73.3 bits (180), Expect = 1e-15
 Identities = 57/216 (26%), Positives = 89/216 (41%), Gaps = 38/216 (17%)

Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRT 74
           GI    L  DV  +E     V +     G++D+L N A     G+ L    D   + +  
Sbjct: 47  GITTRVL--DVTDKEQ----VAALAKEEGRIDVLFNCAGFVHHGSIL----DCEDDDWDF 96

Query: 75  VIEIDSVGTFIMCHEAL-KYLKKGGRGQASSSSGGIIINI-SATLHYTATWYQIHVSAAK 132
            + ++    ++M    L K L +           G IIN+ S          +   S  K
Sbjct: 97  AMNLNVRSMYLMIKAVLPKMLARKD---------GSIINMSSVASSIKGVPNRFVYSTTK 147

Query: 133 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMAAY 187
           AAV  +T+S+A ++     IR N I PG + DT  + +       PEE       + A  
Sbjct: 148 AAVIGLTKSVAADF-AQQGIRCNAICPGTV-DTPSLEERIQAQPDPEEAL---KAFAARQ 202

Query: 188 ---KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
              +     ++A  A+YLASD   YV G  +++DGG
Sbjct: 203 PLGRLATPEEVAALAVYLASDESAYVTGTAVVIDGG 238

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 73.5 bits (181), Expect = 2e-15
 Identities = 64/216 (29%), Positives = 93/216 (43%), Gaps = 33/216 (15%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNF---LVPAED------LSPNGFRTVIEI 78
           DV   E+    V   I  FG++D LVN A  N    LV  +D      L+   F  +  I
Sbjct: 57  DVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNI 116

Query: 79  DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSI 138
           +  G F+M     + + K           G+I+N+S+      +  Q   +A KAA++S 
Sbjct: 117 NQKGVFLMSQAVARQMVKQH--------DGVIVNMSSEAGLEGSEGQSCYAATKAALNSF 168

Query: 139 TRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE----IRSKATDYMAA-YK----- 188
           TRS A E G  + IRV G+APG I +  G+     EE     R    + + A Y      
Sbjct: 169 TRSWAKELG-KHNIRVVGVAPG-ILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTI 226

Query: 189 ----FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                G+  ++A    YL SD   Y+ G T  + GG
Sbjct: 227 PLGRSGKLSEVADLVCYLLSDRASYITGVTTNIAGG 262

Length = 266

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 72.9 bits (179), Expect = 2e-15
 Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 23/230 (10%)

Query: 4   RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV- 62
           R  ++   +A + + G  A     D+     A  VV + +  FG++D+L+N   G     
Sbjct: 36  RSELVHEVLAEILAAGDAAHVHTADLETYAGAQGVVRAAVERFGRVDVLINNVGGTIWAK 95

Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 122
           P E          I      T   C   L ++ +  R Q      G+I+N+S+    T  
Sbjct: 96  PYEHYEEEQIEAEIRRSLFPTLWCCRAVLPHMLE--RQQ------GVIVNVSSIA--TRG 145

Query: 123 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP--------IKDTAGVSKLAPE 174
            Y+I  SAAK  V+++T SLA E      IRVN +APG          ++ A +S+    
Sbjct: 146 IYRIPYSAAKGGVNALTASLAFEHA-RDGIRVNAVAPGGTEAPPRKIPRNAAPMSEQEKV 204

Query: 175 ---EIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN 221
               I  +  D     ++G   +   A L+LASD   Y+ G  L V GG+
Sbjct: 205 WYQRIVDQTLDSSLMGRYGTIDEQVRAILFLASDEASYITGTVLPVGGGD 254

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 72.1 bits (177), Expect = 5e-15
 Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 16/169 (9%)

Query: 55  AAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM-CHEALKYLKKGGRGQASSSSGGIIINI 113
           A  G +      L P G    I   +V  F++   EA K ++K G        GG II++
Sbjct: 101 AVVGGY-TKFMRLKPKGLNN-IYTATVNAFVVGAQEAAKRMEKVG--------GGSIISL 150

Query: 114 SAT--LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL 171
           S+T  L Y    Y  H   +KAAV+++ +  A E G +  IRVN ++ GPI   A  +  
Sbjct: 151 SSTGNLVYIEN-YAGH-GTSKAAVETMVKYAATELG-EKNIRVNAVSGGPIDTDALKAFT 207

Query: 172 APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             EE+++K  +     + G+  D+A A L+L S+   ++ G T++VDGG
Sbjct: 208 NYEEVKAKTEELSPLNRMGQPEDLAGACLFLCSEKASWLTGQTIVVDGG 256

Length = 260

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 72.2 bits (178), Expect = 5e-15
 Identities = 43/163 (26%), Positives = 71/163 (43%), Gaps = 10/163 (6%)

Query: 2   GRRKTVLRSAVAALHSLGIP-AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
            RR+  L    +    LG P    +  D+   EDA +VVE  +  FG LDIL+N A  + 
Sbjct: 34  ARREERLEEVKSECLELGAPSPHVVPLDMSDLEDAEQVVEEALKLFGGLDILINNAGISM 93

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
                D S +  R ++E++  G   +   AL +L +  +G         I+ +S+     
Sbjct: 94  RSLFHDTSIDVDRKIMEVNYFGPVALTKAALPHLIERSQGS--------IVVVSSIAGKI 145

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 163
              ++   +A+K A+     SL  E  ++  I V  + PG I 
Sbjct: 146 GVPFRTAYAASKHALQGFFDSLRAEL-SEPNISVTVVCPGLID 187

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 72.0 bits (177), Expect = 6e-15
 Identities = 69/238 (28%), Positives = 97/238 (40%), Gaps = 31/238 (13%)

Query: 2   GRRKTVL-RSA--VAAL-HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAA 56
           G +  VL RSA  VA L    G   +G+EGDVR   D  R V   +  FGKLD  + NA 
Sbjct: 28  GAKVAVLDRSAEKVAELRADFGDAVVGVEGDVRSLADNERAVARCVERFGKLDCFIGNAG 87

Query: 57  AGNFL-----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIII 111
             ++      +P E L    F  +  I+  G  +    AL  L          + G +I 
Sbjct: 88  IWDYSTSLVDIPEEKLDE-AFDELFHINVKGYILGAKAALPALYA--------TEGSVIF 138

Query: 112 NISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI-KDTAGVSK 170
            +S    Y      ++  A+K AV  + + LA E      IRVNG+APG +  D  G + 
Sbjct: 139 TVSNAGFYPGGGGPLYT-ASKHAVVGLVKQLAYELAPH--IRVNGVAPGGMVTDLRGPAS 195

Query: 171 LAPEEIRSKAT---DYMAAY----KFGEKWDIAMAALYLAS-DAGKYVNGNTLIVDGG 220
           L   E         D + +        E  D   A ++LAS    +   G  +  DGG
Sbjct: 196 LGQGETSISTPPLDDMLKSILPLGFAPEPEDYTGAYVFLASRGDNRPATGTVINYDGG 253

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 71.8 bits (176), Expect = 1e-14
 Identities = 65/235 (27%), Positives = 107/235 (45%), Gaps = 20/235 (8%)

Query: 2   GRRKTVLRSAVAALHSL-GIPAIGLE-GDVRKREDAVRVVESTINHFGKLDILVNAAAGN 59
           GR    L +A   + +L G  A+  E  DV   +   R V++     G+L  +V+ A G+
Sbjct: 38  GRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGRLHGVVHCAGGS 97

Query: 60  FLV-PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 118
             + P   +  + +R  ++++  GT  +   A + L +GG        GG  + IS+   
Sbjct: 98  ETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGG--------GGSFVGISSIAA 149

Query: 119 Y-TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR 177
             T  W+  +    K+AVD + +  A E G  + +RVN I PG I+           E+ 
Sbjct: 150 SNTHRWFGAY-GVTKSAVDHLMKLAADELGPSW-VRVNSIRPGLIRTDLVAPITESPELS 207

Query: 178 SKATDYMAAY---KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDL 229
           +   DY A     + GE  D+A  A++L SDA  ++ G  + VDGG+ L    D 
Sbjct: 208 A---DYRACTPLPRVGEVEDVANLAMFLLSDAASWITGQVINVDGGHMLRRGPDF 259

Length = 276

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 70.4 bits (173), Expect = 2e-14
 Identities = 67/250 (26%), Positives = 99/250 (39%), Gaps = 54/250 (21%)

Query: 2   GRRKTVL-RSA--VAAL-HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAA 56
           G R  VL RSA  +A+L    G   + +EGDV    D  R V+ T++ FGKLD  V NA 
Sbjct: 30  GARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCFVGNAG 89

Query: 57  AGNFLVPAEDLSPN----GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIIN 112
             ++     D+        F  +  ++  G  +    AL  LK  G        G +I  
Sbjct: 90  IWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASG--------GSMIFT 141

Query: 113 ISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG------------ 160
           +S +  Y      ++  A+K AV  + R LA E      IRVNG+APG            
Sbjct: 142 LSNSSFYPGGGGPLYT-ASKHAVVGLVRQLAYELAPK--IRVNGVAPGGTVTDLRGPASL 198

Query: 161 -----PIKDTAG----VSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA-GKYV 210
                 I D+ G    ++ + P +   +  D+   Y              LAS    + +
Sbjct: 199 GQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPYVL------------LASRRNSRAL 246

Query: 211 NGNTLIVDGG 220
            G  +  DGG
Sbjct: 247 TGVVINADGG 256

Length = 263

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 70.2 bits (172), Expect = 2e-14
 Identities = 57/219 (26%), Positives = 93/219 (42%), Gaps = 22/219 (10%)

Query: 15  LHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRT 74
           L   G     +  DVR        ++      G++DILVN A    L    D+S      
Sbjct: 49  LCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDF 108

Query: 75  VIEIDSVGTFIMCHEALKYLKKGGRGQ---ASSSSGGIIINISATLHYTATWYQIHVSAA 131
            I+I+  G + +    L  +     G+    SS +G ++ +   T +             
Sbjct: 109 HIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYAL----------T 158

Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSKATDYMAAY 187
           KAA+  +T+SLA+E+     IRVN I PG ++ T     +A    PE+  S  T+   A 
Sbjct: 159 KAAIVGLTKSLAVEYA-QSGIRVNAICPGYVR-TPMAESIARQSNPEDPESVLTEMAKAI 216

Query: 188 ---KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 223
              +  +  ++   A +LASD   Y+ G   ++DGG+ L
Sbjct: 217 PLRRLADPLEVGELAAFLASDESSYLTGTQNVIDGGSTL 255

Length = 263

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 70.3 bits (173), Expect = 2e-14
 Identities = 59/210 (28%), Positives = 86/210 (40%), Gaps = 21/210 (10%)

Query: 10  SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSP 69
           +A   + + G  A+ L GDVR  +     V   +  FG +DI VN A+   L   ED   
Sbjct: 52  TAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPM 111

Query: 70  NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 129
             F  + +I+  GTF++    L +LKK        S    I+ +S  L+    W+  H +
Sbjct: 112 KRFDLMQQINVRGTFLVSQACLPHLKK--------SENPHILTLSPPLNLDPKWFAPHTA 163

Query: 130 --AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 187
              AK  +   T  LA E+  D  I VN + P     TA V  L   +          A 
Sbjct: 164 YTMAKYGMSLCTLGLAEEFR-DDGIAVNALWPRTTIATAAVRNLLGGD---------EAM 213

Query: 188 KFGEKWDI-AMAALYLASDAGKYVNGNTLI 216
           +     +I A AA  + S   +   GN LI
Sbjct: 214 RRSRTPEIMADAAYEILSRPAREFTGNFLI 243

Length = 273

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 70.2 bits (172), Expect = 3e-14
 Identities = 56/175 (32%), Positives = 86/175 (49%), Gaps = 4/175 (2%)

Query: 47  GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSS 106
           G +DILVN +  +      D++P  F  V + ++ G F +  E  K +    +G  ++  
Sbjct: 85  GTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKP 144

Query: 107 GGIIINISATLHYTATWYQIHV-SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT 165
           GG IINI A++       QI +   +KAAV  +TR++ALEWG  + I VN I PG I DT
Sbjct: 145 GGRIINI-ASVAGLRVLPQIGLYCMSKAAVVHMTRAMALEWGR-HGINVNAICPGYI-DT 201

Query: 166 AGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                    E   K    +   + G+  D+    L LA+D  +++NG  +  D G
Sbjct: 202 EINHHHWETEQGQKLVSMLPRKRVGKPEDLDGLLLLLAADESQFINGAIISADDG 256

Length = 258

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 69.1 bits (169), Expect = 5e-14
 Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 19/216 (8%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAE---DLS 68
             A+ + G  A  + GDV    D + + ++  + FG+LD LVN A    + P+    D+ 
Sbjct: 44  ADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLDALVNNAG--IVAPSMPLADMD 101

Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLK--KGGRGQASSSSGGIIINISATLHYTATWYQ- 125
               R + + + +G ++   EA + L   +GGRG       G I+N+S+      +  + 
Sbjct: 102 AARLRRMFDTNVLGAYLCAREAARRLSTDRGGRG-------GAIVNVSSIASRLGSPNEY 154

Query: 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI-RSKATDYM 184
           +  + +K AVD++T  LA E G    +RVN + PG I+     S   P    R  A   +
Sbjct: 155 VDYAGSKGAVDTLTLGLAKELGPH-GVRVNAVRPGLIETEIHASGGQPGRAARLGAQTPL 213

Query: 185 AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
              + GE  ++A   ++L SDA  YV G  L V GG
Sbjct: 214 G--RAGEADEVAETIVWLLSDAASYVTGALLDVGGG 247

Length = 248

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 69.6 bits (171), Expect = 9e-14
 Identities = 39/143 (27%), Positives = 59/143 (41%), Gaps = 8/143 (5%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
           R +  L +  A + + G  A+ +  DV   E      +      G +D  VN A      
Sbjct: 40  RGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPIDTWVNNAMVTVFG 99

Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 122
           P ED++P  FR V E+  +G       AL++++   R        G II + + L Y + 
Sbjct: 100 PFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDR--------GAIIQVGSALAYRSI 151

Query: 123 WYQIHVSAAKAAVDSITRSLALE 145
             Q    AAK A+   T SL  E
Sbjct: 152 PLQSAYCAAKHAIRGFTDSLRCE 174

Length = 334

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 68.0 bits (166), Expect = 1e-13
 Identities = 61/212 (28%), Positives = 94/212 (44%), Gaps = 11/212 (5%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPN 70
           V  +   G  A  L+ D+      V +  +   H   L  LVN A   F     E+L+  
Sbjct: 43  VNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAE 102

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS-ATLHYTATWYQIHVS 129
               V+  +  G F+ C EA+K +     G      GG I+N+S A     A    +  +
Sbjct: 103 RINRVLSTNVTGYFLCCREAVKRMALKHGGS-----GGAIVNVSSAASRLGAPGEYVDYA 157

Query: 130 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI-RSKATDYMAAYK 188
           A+K A+D++T  L+LE      IRVN + PG I      S   P  + R K+   M   +
Sbjct: 158 ASKGAIDTLTTGLSLEVAAQ-GIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQ--R 214

Query: 189 FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            G+  ++A A ++L SD   YV G+ + + GG
Sbjct: 215 GGQPEEVAQAIVWLLSDKASYVTGSFIDLAGG 246

Length = 247

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 66.9 bits (164), Expect = 3e-13
 Identities = 61/220 (27%), Positives = 92/220 (41%), Gaps = 28/220 (12%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
              L +L   A  ++ D+         VE T+  FG++D LVN A  N  V  E      
Sbjct: 47  AEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEA-GREA 105

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS-- 129
           F   +E + +  ++M H  L +LK          S G I+NIS+    TA   Q   S  
Sbjct: 106 FVASLERNLIHYYVMAHYCLPHLKA---------SRGAIVNISSK---TALTGQGGTSGY 153

Query: 130 -AAKAAVDSITRSLALEWGTD---YAIRVNGIAPG----PIKDTAGVSKLAPEEIRSKAT 181
            AAK A  ++TR    EW        +RVN + P     P+ +    +   PE   +  T
Sbjct: 154 AAAKGAQLALTR----EWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAIT 209

Query: 182 DYMA-AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             +   ++     +IA  A++L S+   +  G  L VDGG
Sbjct: 210 AKIPLGHRMTTAEEIADTAVFLLSERSSHTTGQWLFVDGG 249

Length = 258

>gnl|CDD|181020 PRK07533, PRK07533, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 66.9 bits (164), Expect = 4e-13
 Identities = 64/214 (29%), Positives = 93/214 (43%), Gaps = 49/214 (22%)

Query: 28  DVRKREDAVRVVESTI-NHFGKLDILVNAAAGNFLVPAEDL-------SPNGFRTVIEID 79
           DVR     +  V + I   +G+LD L+++ A     P EDL       S  GF   +++ 
Sbjct: 68  DVR-EPGQLEAVFARIAEEWGRLDFLLHSIA---FAPKEDLHGRVVDCSREGFALAMDV- 122

Query: 80  SVGTFI-MCHEALKYLKKGGRGQASSSSGG--IIINISATLHYTATWYQIHVSAAKAAVD 136
           S  +FI M   A   +  GG     S  G   ++ N           Y + +   KAA++
Sbjct: 123 SCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVVEN-----------YNL-MGPVKAALE 170

Query: 137 SITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-----EEIRSKA-----TDYMAA 186
           S  R LA E G    IRV+ I+PGP+K T   S +       E+   +A      D    
Sbjct: 171 SSVRYLAAELG-PKGIRVHAISPGPLK-TRAASGIDDFDALLEDAAERAPLRRLVDID-- 226

Query: 187 YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                  D+   A +LASDA + + GNTL +DGG
Sbjct: 227 -------DVGAVAAFLASDAARRLTGNTLYIDGG 253

Length = 258

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 66.6 bits (162), Expect = 4e-13
 Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 15/222 (6%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R    L      + + G   + +  DV + +    +++      G +DI V  A    +
Sbjct: 40  ARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITV 99

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQA---SSSSGGIIINISATLH 118
            P  D+    F+ +   +  G F+    A K + K G+G     ++S  G IIN+   + 
Sbjct: 100 TPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVS 159

Query: 119 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS 178
                   H  A+KAAV  +T+++A+E    + IRVN ++PG I  T  V      E + 
Sbjct: 160 --------HYCASKAAVIHLTKAMAVELAP-HKIRVNSVSPGYIL-TELVEPYT--EYQP 207

Query: 179 KATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                +   + G   ++A   LYLAS+A  Y+ G+ +++DGG
Sbjct: 208 LWEPKIPLGRLGRPEELAGLYLYLASEASSYMTGSDIVIDGG 249

Length = 253

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 66.6 bits (163), Expect = 4e-13
 Identities = 46/209 (22%), Positives = 82/209 (39%), Gaps = 18/209 (8%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81
           A G   D    +  + +       FG++D+LV  A         D     F   ++++ V
Sbjct: 55  AYGFGADATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLV 114

Query: 82  GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 141
           G F+   E  + + + G         G II I++      + +    SAAK     +T+S
Sbjct: 115 GYFLCAREFSRLMIRDG-------IQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQS 167

Query: 142 LALEWGTDYAIRVNGIAPGPIKDT----------AGVSKLAPEEIRSKATDYMAAYKFGE 191
           LAL+   +Y I V+ +  G +  +          A    + P+E+     D +   +  +
Sbjct: 168 LALDLA-EYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCD 226

Query: 192 KWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             D+    L+ AS    Y  G ++ V GG
Sbjct: 227 YQDVLNMLLFYASPKASYCTGQSINVTGG 255

Length = 259

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 66.2 bits (162), Expect = 6e-13
 Identities = 55/236 (23%), Positives = 91/236 (38%), Gaps = 29/236 (12%)

Query: 1   MGRRKTVL---RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA 57
            G +  +L    S    +  LG     +  DV   +D    +      FG+LDI+VN A 
Sbjct: 25  QGAKVVILDLPNSPGETVAKLGDNCRFVPVDVTSEKDVKAALALAKAKFGRLDIVVNCAG 84

Query: 58  -----------GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSS 106
                      G      E      F+ VI ++ +GTF +   A   + K          
Sbjct: 85  IAVAAKTYNKKGQQPHSLEL-----FQRVINVNLIGTFNVIRLAAGAMGK----NEPDQG 135

Query: 107 G--GIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD 164
           G  G+IIN ++   +     Q   SA+K  +  +T  +A +      IRV  IAPG + D
Sbjct: 136 GERGVIINTASVAAFEGQIGQAAYSASKGGIVGMTLPIARDLAPQ-GIRVVTIAPG-LFD 193

Query: 165 TAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           T  ++ L  +     A       + G+  + A    ++  +   Y+NG  + +DG 
Sbjct: 194 TPLLAGLPEKVRDFLAKQVPFPSRLGDPAEYAHLVQHIIEN--PYLNGEVIRLDGA 247

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 66.4 bits (162), Expect = 7e-13
 Identities = 64/220 (29%), Positives = 94/220 (42%), Gaps = 18/220 (8%)

Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP-AEDL 67
              V  + + G  A+ L GD++      ++VE  +   G LDILVN A     V    D+
Sbjct: 95  AEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADI 154

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
           +   F    + +    F +C  A+ +L  G    AS      IIN  +   Y  +   + 
Sbjct: 155 TTEQFDATFKTNVYAMFWLCKAAIPHLPPG----AS------IINTGSIQSYQPSPTLLD 204

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 187
            ++ KAA+ + T++LA +   +  IRVN +APGP+      S   P E   K  D+ +  
Sbjct: 205 YASTKAAIVAFTKALAKQV-AEKGIRVNAVAPGPVWTPLQPSGGQPPE---KIPDFGSET 260

Query: 188 KFGEKWDIA-MAALY--LASDAGKYVNGNTLIVDGGNWLS 224
                     MA LY  LAS    YV G    V GG  LS
Sbjct: 261 PMKRPGQPVEMAPLYVLLASQESSYVTGEVFGVTGGLLLS 300

Length = 300

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 66.6 bits (162), Expect = 7e-13
 Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 12/207 (5%)

Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP-AEDLSPNGFRTVIE 77
           G  A+ L GD+   + A  +V       G LDI+   A     +P   DL+   F+    
Sbjct: 99  GRKAVLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFA 158

Query: 78  IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDS 137
           I+    F +  EA+  L KG            II  S+   Y  + + +  +A KAA+ +
Sbjct: 159 INVFALFWLTQEAIPLLPKGAS----------IITTSSIQAYQPSPHLLDYAATKAAILN 208

Query: 138 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 197
            +R LA +   +  IRVN +APGPI     +S    ++   +        + G+  ++A 
Sbjct: 209 YSRGLAKQVA-EKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAP 267

Query: 198 AALYLASDAGKYVNGNTLIVDGGNWLS 224
             +YLAS    YV      V GG  L 
Sbjct: 268 VYVYLASQESSYVTAEVHGVCGGEHLG 294

Length = 294

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 65.8 bits (161), Expect = 8e-13
 Identities = 57/228 (25%), Positives = 89/228 (39%), Gaps = 20/228 (8%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA------GNFL 61
           L +    L +LG+  I    DV        ++++    +G++D LVN A       G+ L
Sbjct: 40  LAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLL 99

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
               DL+P  F  V+ I+  G F +     K +      +        I+ +S+      
Sbjct: 100 ----DLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPH--RSIVFVSSVNAIMV 153

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD--TAGVSKLAPEEIRSK 179
           +  +     +KA +    +  A     +  I V  + PG IK   TA V+      I   
Sbjct: 154 SPNRGEYCISKAGLSMAAQLFAARLA-EEGIGVYEVRPGLIKTDMTAPVTAKYDALIAKG 212

Query: 180 ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPR 227
                   ++GE  D+A A   LAS    Y  G  + VDGG  LS PR
Sbjct: 213 LV---PMPRWGEPEDVARAVAALASGDLPYSTGQAIHVDGG--LSIPR 255

Length = 256

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 65.8 bits (160), Expect = 8e-13
 Identities = 63/228 (27%), Positives = 99/228 (43%), Gaps = 23/228 (10%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF------GKLDILVNA 55
           GR K      +  + S G  A  +E D+   +   ++VE   N         ++DILVN 
Sbjct: 38  GRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNN 97

Query: 56  AAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISA 115
           A        E+ +   F  ++ ++    F +  + L  L+  GR          +INIS+
Sbjct: 98  AGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGR----------VINISS 147

Query: 116 T---LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA 172
               L +T +   I    +K A++++T  LA   G +  I VN I PG  K       L 
Sbjct: 148 AEVRLGFTGS---IAYGLSKGALNTMTLPLAKHLG-ERGITVNTIMPGYTKTDINAKLLD 203

Query: 173 PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             EIR+ AT+     + G+  DIA A  +LAS   ++V G  + V GG
Sbjct: 204 DPEIRNFATNSSVFGRIGQVEDIADAVAFLASSDSRWVTGQIIDVSGG 251

Length = 254

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 64.7 bits (158), Expect = 2e-12
 Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 8/143 (5%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
           R    L      +  LG  AI +  DV       R  ++ +  FG++D  VN A      
Sbjct: 32  RSAEALHELAREVRELGGEAIAVVADVADAAQVERAADTAVERFGRIDTWVNNAGVAVFG 91

Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 122
             ED++P  FR V +++ +G       AL +L++ G        GG +IN+ + L Y + 
Sbjct: 92  RFEDVTPEEFRRVFDVNYLGHVYGTLAALPHLRRRG--------GGALINVGSLLGYRSA 143

Query: 123 WYQIHVSAAKAAVDSITRSLALE 145
             Q   SA+K AV   T SL  E
Sbjct: 144 PLQAAYSASKHAVRGFTESLRAE 166

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 65.0 bits (159), Expect = 2e-12
 Identities = 43/182 (23%), Positives = 72/182 (39%), Gaps = 16/182 (8%)

Query: 2   GRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
            RR+  L +    L    G+    +  D+   E   R+ +      G +D+LVN A    
Sbjct: 37  ARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGGPIDVLVNNAGFGT 96

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
             P  +LS +    +I+++ +    +    L  + + G G         IINI +     
Sbjct: 97  FGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGH--------IINIGSAAGLI 148

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK------DTAGVSKLAPE 174
            T Y    SA KA V S + +L  E      ++V  + PGP +        + V  L+P 
Sbjct: 149 PTPYMAVYSATKAFVLSFSEALREELK-GTGVKVTAVCPGPTRTEFFDAKGSDVYLLSPG 207

Query: 175 EI 176
           E+
Sbjct: 208 EL 209

Length = 265

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 64.1 bits (156), Expect = 2e-12
 Identities = 51/170 (30%), Positives = 78/170 (45%), Gaps = 15/170 (8%)

Query: 13  AALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGF 72
           AA        +GL GDVR   D  R V++    FG LD LVN A    + P E+L+P  +
Sbjct: 39  AAAAQELEGVLGLAGDVRDEADVRRAVDAMEEAFGGLDALVNNAGVGVMKPVEELTPEEW 98

Query: 73  RTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAK 132
           R V++ +  G F   H+A   L + G        GG I+N+ +     A       +A+K
Sbjct: 99  RLVLDTNLTGAFYCIHKAAPALLRRG--------GGTIVNVGSLAGKNAFKGGAAYNASK 150

Query: 133 AAVDSITRSLALEWGTDYAIRVNGIAPGPI-KDTAGVS-----KLAPEEI 176
             +  ++ +  L+   +  IRV  + PG +    AG       KLAPE++
Sbjct: 151 FGLLGLSEAAMLDL-REANIRVVNVMPGSVDTGFAGSPEGQAWKLAPEDV 199

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 64.5 bits (157), Expect = 3e-12
 Identities = 64/222 (28%), Positives = 93/222 (41%), Gaps = 23/222 (10%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            RR   L +    L + G  A+ LE DV   +     VE T+   G+LDILVN A    L
Sbjct: 34  ARRVDRLEALADELEAEGGKALVLELDVTDEQQVDAAVERTVEALGRLDILVNNAGIMLL 93

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            P ED     +  +I+ + +G     H AL +            + G I+NIS+     A
Sbjct: 94  GPVEDADTTDWTRMIDTNLLGLMYTTHAALPHHL--------LRNKGTIVNISSVAGRVA 145

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG----PIKD--TAGVSKLAPEE 175
                  +A K  V++ +  L  E  T+  +RV  I PG     ++D  T  ++K A EE
Sbjct: 146 VRNSAVYNATKFGVNAFSEGLRQEV-TERGVRVVVIEPGTVDTELRDHITHTITKEAYEE 204

Query: 176 IRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIV 217
             S      A        DIA A  Y A  A  +V  N +++
Sbjct: 205 RISTIRKLQAE-------DIAAAVRY-AVTAPHHVTVNEILI 238

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score = 64.4 bits (157), Expect = 3e-12
 Identities = 55/180 (30%), Positives = 77/180 (42%), Gaps = 21/180 (11%)

Query: 2   GRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAA 56
           G R  VL  + A L  L    G   +G+EGDVR  +D    V   +  FGK+D L+ NA 
Sbjct: 29  GARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCLIPNAG 88

Query: 57  AGNFLVP----AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIIN 112
             ++        +D     F  V  I+  G  +    AL  L         +S G +I  
Sbjct: 89  IWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPAL--------VASRGSVIFT 140

Query: 113 ISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI-KDTAGVSKL 171
           IS    Y      ++ +AAK AV  + + LA E      +RVNG+APG +  D  G   L
Sbjct: 141 ISNAGFYPNGGGPLY-TAAKHAVVGLVKELAFELAP--YVRVNGVAPGGMSSDLRGPKSL 197

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 64.2 bits (157), Expect = 3e-12
 Identities = 50/191 (26%), Positives = 81/191 (42%), Gaps = 21/191 (10%)

Query: 39  VESTINHFGKLDILVNAAAGNFL---VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLK 95
           +E   +    +DIL N A    L    P  D S   ++ + + +   TF++    L  + 
Sbjct: 58  LEPLFDWVPSVDILCNTAG--ILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQML 115

Query: 96  KGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA---I 152
           +   G        IIIN+ +   + A       +A+K A+   T+ LAL    DYA   I
Sbjct: 116 ERKSG--------IIINMCSIASFVAGGGGAAYTASKHALAGFTKQLAL----DYAKDGI 163

Query: 153 RVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNG 212
           +V GIAPG +K     +   P  +           ++ E  ++A   L+LAS    Y+ G
Sbjct: 164 QVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLFLASGKADYMQG 223

Query: 213 NTLIVDGGNWL 223
             + +DGG W 
Sbjct: 224 TIVPIDGG-WT 233

Length = 235

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 63.8 bits (156), Expect = 3e-12
 Identities = 42/154 (27%), Positives = 64/154 (41%), Gaps = 14/154 (9%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSP 69
           AV  L + G+     + DV          +     +G LDILV NA            + 
Sbjct: 41  AVEKLRAEGLSVRFHQLDVTDDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTPTR 100

Query: 70  NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 129
              R  ++ +  GT  +    L  LKK        S  G I+N+S+ L    + Y     
Sbjct: 101 EQARETMKTNFFGTVDVTQALLPLLKK--------SPAGRIVNVSSGLGSLTSAYG---- 148

Query: 130 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 163
            +KAA++++TR LA E   +  I+VN   PG +K
Sbjct: 149 VSKAALNALTRILAKEL-KETGIKVNACCPGWVK 181

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs

 Score = 63.9 bits (156), Expect = 3e-12
 Identities = 50/182 (27%), Positives = 68/182 (37%), Gaps = 22/182 (12%)

Query: 33  EDAVRVVESTINHFGKLDILVNAAAG-NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 91
           E A +VV S     GK+D L+  A G              +  + + +   +FI  H A 
Sbjct: 53  EQAKQVVASVARLSGKVDALICVAGGWAGGSAKSKSFVKNWDLMWKQNLWTSFIASHLAT 112

Query: 92  KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW-GTDY 150
           K+L  GG           ++   A      T   I   AAKAAV  +T+SLA E  G   
Sbjct: 113 KHLLSGGL----------LVLTGAKAALEPTPGMIGYGAAKAAVHQLTQSLAAENSGLPA 162

Query: 151 AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYV 210
               N I P  + DT    K  P+   S  T             IA   L+ AS A +  
Sbjct: 163 GSTANAILPVTL-DTPANRKAMPDADFSSWTPLEF---------IAELILFWASGAARPK 212

Query: 211 NG 212
           +G
Sbjct: 213 SG 214

Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 65.3 bits (159), Expect = 4e-12
 Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 24/220 (10%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81
           A+ L+ DV   +            +G +DI+VN A      P E+ +   ++  ++I + 
Sbjct: 467 AVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILAT 526

Query: 82  GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 141
           G F++  EA + +++ G        GG I+ I++     A       SAAKAA   + R 
Sbjct: 527 GYFLVAREAFRQMREQG-------LGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARC 579

Query: 142 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY-MAAYKFGEKW------- 193
           LA E G  Y IRVN + P  +   +G+     E    +A  Y + A +  E +       
Sbjct: 580 LAAE-GGTYGIRVNTVNPDAVLQGSGI--WDGEWREERAAAYGIPADELEEHYAKRTLLK 636

Query: 194 ------DIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPR 227
                 DIA A  +LAS   +   G  + VDGG   +  R
Sbjct: 637 RHIFPADIAEAVFFLASSKSEKTTGCIITVDGGVPAAFLR 676

Length = 676

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 63.8 bits (156), Expect = 5e-12
 Identities = 59/249 (23%), Positives = 97/249 (38%), Gaps = 62/249 (24%)

Query: 6   TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVN------AAAGN 59
            V+ +A +    L      +  D+   E    V  + +   G +DILV+      A AG 
Sbjct: 35  RVVTTARSRPDDLPEGVEFVAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGG 94

Query: 60  FLVPAED-----LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 114
           F    ++     L+ N    V  +D              L  G   + S    G+II+++
Sbjct: 95  FAALTDEEWQDELNLNLLAAV-RLDRA------------LLPGMIARGS----GVIIHVT 137

Query: 115 ----------ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD 164
                     +T  Y         +AAKAA+ + ++SL+ E      +RVN ++PG I+ 
Sbjct: 138 SIQRRLPLPESTTAY---------AAAKAALSTYSKSLSKEVAPK-GVRVNTVSPGWIET 187

Query: 165 TAGVSKLAPEEIRSKATDYMAAYK-------------FGEKWDIAMAALYLASDAGKYVN 211
            A V+ LA     +  TDY  A +               E  ++A    +LASD    + 
Sbjct: 188 EAAVA-LAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAELIAFLASDRAASIT 246

Query: 212 GNTLIVDGG 220
           G   ++DGG
Sbjct: 247 GTEYVIDGG 255

Length = 260

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 63.1 bits (154), Expect = 7e-12
 Identities = 65/219 (29%), Positives = 102/219 (46%), Gaps = 29/219 (13%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
           AVAA  SLG  A  +  D+       R V + +  FG++DILVN A   +L      S  
Sbjct: 45  AVAA--SLGERARFIATDITDDAAIERAVATVVARFGRVDILVNLAC-TYLDDGLASSRA 101

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIIN---ISATLHYTATW-YQI 126
            +   ++++ V   ++   A  +L +G         GG I+N   ISA    T  W Y  
Sbjct: 102 DWLAALDVNLVSAAMLAQAAHPHLARG---------GGAIVNFTSISAKFAQTGRWLY-- 150

Query: 127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG----PIKDT-AGVSKLAPEEIRSKAT 181
              A+KAA+  +TRS+A++   D  IRVN ++PG     + D  +G  +   + +   A 
Sbjct: 151 --PASKAAIRQLTRSMAMDLAPD-GIRVNSVSPGWTWSRVMDELSGGDRAKADRV---AA 204

Query: 182 DYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            +    + G+  ++A    +L SDA  +V G    VDGG
Sbjct: 205 PFHLLGRVGDPEEVAQVVAFLCSDAASFVTGADYAVDGG 243

Length = 261

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 63.4 bits (154), Expect = 7e-12
 Identities = 53/222 (23%), Positives = 93/222 (41%), Gaps = 20/222 (9%)

Query: 10  SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSP 69
           +    ++  G  AIG+  DV   +     ++     FG +DILV+ A    + P E+ S 
Sbjct: 46  AVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSF 105

Query: 70  NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 129
             ++ +  I   G F+    ALK++ K  R       GG++I + +   + A+  +    
Sbjct: 106 ADWKKMQAIHVDGAFLTTKAALKHMYKDDR-------GGVVIYMGSVHSHEASPLKSAYV 158

Query: 130 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK- 188
            AK  +  + R LA E G  + +R + + PG ++ T  V K  PE+ +          K 
Sbjct: 159 TAKHGLLGLARVLAKE-GAKHNVRSHVVCPGFVR-TPLVDKQIPEQAKELGISEEEVVKK 216

Query: 189 ----------FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                     F    D+A   L+L+S     + G + +V  G
Sbjct: 217 VMLGKTVDGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSHG 258

Length = 262

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 62.4 bits (152), Expect = 1e-11
 Identities = 57/208 (27%), Positives = 87/208 (41%), Gaps = 24/208 (11%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81
            IG+  DV  RE    + ++TI+ +G  DILVN A      P  ++        I  D  
Sbjct: 58  GIGVLADVSTREGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFK 117

Query: 82  GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV-SAAKAAVDSITR 140
                  E  K +++GG           I+NI A++      Y + +  A KAAV ++T+
Sbjct: 118 SVIYCSQELAKEMREGGA----------IVNI-ASVAGIRPAYGLSIYGAMKAAVINLTK 166

Query: 141 SLALEWGTDYAIRVNGIAPGPIKDTAG-----VSKLAPEEIRSKATDYMAAYKFGEKWDI 195
            LALE      IRVN IAPG +K   G     V  ++ +E   K T      K  +  ++
Sbjct: 167 YLALELAP--KIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFT---LMGKILDPEEV 221

Query: 196 AMAALYLASDAGKYVNGNTLIVDGGNWL 223
           A     +       + G   ++D G  L
Sbjct: 222 AEFVAAILKIES--ITGQVFVLDSGESL 247

Length = 252

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 61.9 bits (150), Expect = 2e-11
 Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 25/198 (12%)

Query: 38  VVESTINHFGKLDILVNAAAGNF---LVPAEDLSPNGFRTVIEI--------DSVGTFIM 86
           ++++    FG+ D+LVN A+  +   L+  +     G +  +E+        +++  + +
Sbjct: 74  IIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFL 133

Query: 87  CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 146
             +A    + G R +  S++  I+    A        + ++ + AK A++ +TRS ALE 
Sbjct: 134 I-KAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMY-TMAKHALEGLTRSAALEL 191

Query: 147 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEK----WDIAMAALYL 202
                IRVNG+APG       +S L          DY      G++      IA   ++L
Sbjct: 192 AP-LQIRVNGVAPG-------LSLLPDAMPFEVQEDYRRKVPLGQREASAEQIADVVIFL 243

Query: 203 ASDAGKYVNGNTLIVDGG 220
            S   KY+ G  + VDGG
Sbjct: 244 VSPKAKYITGTCIKVDGG 261

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 59.9 bits (146), Expect = 3e-11
 Identities = 29/139 (20%), Positives = 48/139 (34%), Gaps = 18/139 (12%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
            VA L +LG        DV  R+    ++ +     G LD +V+ A      P E+L+P 
Sbjct: 43  LVAELEALGAEVTVAACDVADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEELTPE 102

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY---QIH 127
            F  V+     G + +                     G  +  S+            Q +
Sbjct: 103 RFERVLAPKVTGAWNLHELTRD------------LDLGAFVLFSSV---AGVLGSPGQAN 147

Query: 128 VSAAKAAVDSITRSLALEW 146
            +AA AA+D++      E 
Sbjct: 148 YAAANAALDALAEHRRAEG 166

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 61.7 bits (150), Expect = 3e-11
 Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 11/194 (5%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           D+         + +     G +D+LV  A         D +P  +R    ++    + +C
Sbjct: 57  DLTDAASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAY-LC 115

Query: 88  HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 147
            EA+              S G ++NI  +++  A       SAAKA +   T+ LA+E+G
Sbjct: 116 VEAV-------LEGMLKRSRGAVVNI-GSVNGMAALGHPAYSAAKAGLIHYTKLLAVEYG 167

Query: 148 TDYAIRVNGIAPGPIKDTAGVSKLAPE-EIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206
             + IR N +APG +K  A  +++A   ++  +   +     F    D+A A L+LAS A
Sbjct: 168 R-FGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASPA 226

Query: 207 GKYVNGNTLIVDGG 220
            + + G  L VDGG
Sbjct: 227 ARAITGVCLPVDGG 240

Length = 257

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 61.2 bits (148), Expect = 3e-11
 Identities = 55/179 (30%), Positives = 84/179 (46%), Gaps = 17/179 (9%)

Query: 48  KLDILVNAAA---GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASS 104
           K DIL+N A    G F+   E+ +   F  ++ +++   F +  +AL  L+   R     
Sbjct: 88  KFDILINNAGIGPGAFI---EETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSR----- 139

Query: 105 SSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD 164
                IINIS+     +    I  S  K A++++T +LA + G    I VN I PG IK 
Sbjct: 140 -----IINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGAR-GITVNAILPGFIKT 193

Query: 165 TAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 223
                 L+   ++  AT   A  + GE  DIA  A +LAS   ++V G  + V GG+ L
Sbjct: 194 DMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGSCL 252

Length = 252

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 61.1 bits (149), Expect = 3e-11
 Identities = 60/226 (26%), Positives = 97/226 (42%), Gaps = 27/226 (11%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
           L   VA L   G P    + DV        VV+     +G +D+LVN A    L   + L
Sbjct: 35  LLELVADLRRYGYPFATYKLDVADSAAVDEVVQRLEREYGPIDVLVNVAGILRLGAIDSL 94

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ----ASSSSGGIIINISATLHYTATW 123
           S   ++    +++ G F +       +K+   G      S+++    + ++A        
Sbjct: 95  SDEDWQATFAVNTFGVFNVSQAVSPRMKRRRSGAIVTVGSNAANVPRMGMAA-------- 146

Query: 124 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE--IRSKAT 181
           Y    +A+KAA+  +T+ L LE    Y IR N ++PG   DT    +L  +E   +    
Sbjct: 147 Y----AASKAALTMLTKCLGLELA-PYGIRCNVVSPGS-TDTEMQRQLWNDEYGEQQVIA 200

Query: 182 DYMAAYKFG-------EKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                ++ G       E  DIA A L+LASD   ++  + L+VDGG
Sbjct: 201 GSPEQFRLGIPLGKIAEPSDIANAVLFLASDLASHITMHDLVVDGG 246

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 61.1 bits (149), Expect = 4e-11
 Identities = 40/165 (24%), Positives = 67/165 (40%), Gaps = 13/165 (7%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            RR+  L +    + +    A+ L  DV  R      +E+    FG++DILVN A     
Sbjct: 37  ARREERLEALADEIGA--GAALALALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALG 94

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL-HYT 120
            P ++   + +  +I+ +  G        L  + +   G         IIN+ +    Y 
Sbjct: 95  DPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGH--------IINLGSIAGRYP 146

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT 165
                ++  A KAAV + +  L  E      IRV  I+PG ++ T
Sbjct: 147 YPGGAVY-GATKAAVRAFSLGLRQELA-GTGIRVTVISPGLVETT 189

Length = 246

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 61.2 bits (149), Expect = 4e-11
 Identities = 53/231 (22%), Positives = 88/231 (38%), Gaps = 21/231 (9%)

Query: 2   GRRKTVLRSAVAALHSLGIPA--IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN 59
           GR +  L SA A L      A  +    DV    D      +    FG +D+LVN A   
Sbjct: 39  GRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFGGVDMLVNNAGQG 98

Query: 60  FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 119
            +    D + + +R  +E+            L  L+         S+   I+ +++ L  
Sbjct: 99  RVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRA--------SAAASIVCVNSLLAL 150

Query: 120 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 179
               + +  SAA+A + ++ +SLA E      +RVN I  G ++      +        +
Sbjct: 151 QPEPHMVATSAARAGLLNLVKSLATEL-APKGVRVNSILLGLVESGQWRRRYEARADPGQ 209

Query: 180 A----TDYMAAYK------FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           +    T  +A  K       G   + A A  +LAS    Y  G+ + V GG
Sbjct: 210 SWEAWTAALARKKGIPLGRLGRPDEAARALFFLASPLSSYTTGSHIDVSGG 260

Length = 265

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 60.2 bits (146), Expect = 9e-11
 Identities = 59/228 (25%), Positives = 97/228 (42%), Gaps = 16/228 (7%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R +  L + V  L   G+ A G   DVR   +   +V + +  +G +D+LVN A  +  
Sbjct: 34  ARGEEGLATTVKELREAGVEADGRTCDVRSVPEIEALVAAAVARYGPIDVLVNNAGRSGG 93

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
               +L+   +  V+E +  G F +  E    LK GG  +  +   G IINI++T     
Sbjct: 94  GATAELADELWLDVVETNLTGVFRVTKEV---LKAGGMLERGT---GRIINIASTGGKQG 147

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT---------AGVSKLA 172
             +    SA+K  V   T++L LE      I VN + PG ++           A + +++
Sbjct: 148 VVHAAPYSASKHGVVGFTKALGLELART-GITVNAVCPGFVETPMAASVREHYADIWEVS 206

Query: 173 PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            EE   + T  +   ++    ++A    YL  D    V    L V GG
Sbjct: 207 TEEAFDRITARVPLGRYVTPEEVAGMVAYLIGDGAAAVTAQALNVCGG 254

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 59.6 bits (145), Expect = 1e-10
 Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 4/111 (3%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
           R +T L S    L   G  A+ +  DV   E   R++E+ +  FG +DILVN A      
Sbjct: 33  RNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDILVNNAGITMWS 92

Query: 63  PAEDLS-PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ--ASSSSGGII 110
             ++L+  + F  V+ ++ +G     H AL +LK   RGQ    SS  G+ 
Sbjct: 93  RFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKA-SRGQIVVVSSLAGLT 142

Length = 263

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 59.4 bits (144), Expect = 1e-10
 Identities = 55/214 (25%), Positives = 91/214 (42%), Gaps = 26/214 (12%)

Query: 10  SAVAALHSLGIPAIGLEGDVRKREDAVRV-VESTINHFGKLDILVNAAAGNFLVPAEDLS 68
           +A   + + G  A+    D+R  ED VR  VE  +  FG +DILVN A+   L    D  
Sbjct: 49  TAAEEIEAAGGKALPCIVDIRD-EDQVRAAVEKAVEKFGGIDILVNNASAISLTGTLDTP 107

Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 128
              +  ++ +++ GT++     L YLKK             I+N+S  L+    W++ H 
Sbjct: 108 MKRYDLMMGVNTRGTYLCSKACLPYLKKSKNPH--------ILNLSPPLNLNPKWFKNHT 159

Query: 129 --SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI--RSKATDYM 184
             + AK  +      +A E+     I VN + P     TA ++ L   ++    +  + M
Sbjct: 160 AYTMAKYGMSMCVLGMAEEFK-PGGIAVNALWPRTAIATAAMNMLGGVDVAACCRKPEIM 218

Query: 185 AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVD 218
           A        D A A   L   + ++  GN LI +
Sbjct: 219 A--------DAAYAI--LTKPSSEF-TGNFLIDE 241

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 59.2 bits (144), Expect = 2e-10
 Identities = 48/163 (29%), Positives = 70/163 (42%), Gaps = 26/163 (15%)

Query: 28  DVRKRED-AVRVVESTINHFGKLDILVNAA----AGNFLVPAEDLSPNGFRTVIEIDSVG 82
           DV  R      + +      G+LD+L N A     G F    ED+       VI+I+  G
Sbjct: 56  DVTDRAAWDAALADFAAATGGRLDVLFNNAGILRGGPF----EDIPLEAHDRVIDINVKG 111

Query: 83  TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV---SAAKAAVDSIT 139
                H AL YLK         + G  +IN S+    +A + Q  +   SA K AV  +T
Sbjct: 112 VLNGAHAALPYLKA--------TPGARVINTSSA---SAIYGQPGLAVYSATKFAVRGLT 160

Query: 140 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD 182
            +L LEW   + IRV  + P  + DTA +      E+ + +T 
Sbjct: 161 EALDLEWR-RHGIRVADVMPLFV-DTAML-DGTSNEVDAGSTK 200

Length = 260

>gnl|CDD|178331 PLN02730, PLN02730, enoyl-[acyl-carrier-protein] reductase

 Score = 59.0 bits (143), Expect = 3e-10
 Identities = 59/202 (29%), Positives = 81/202 (40%), Gaps = 43/202 (21%)

Query: 37  RVVESTINHFGKLDILVNAAAGNFLV--PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL 94
            V ES    FG +DILV++ A    V  P  + S  G+   I   S     +       +
Sbjct: 109 EVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIM 168

Query: 95  KKGGRGQASSSSGGIIINISATLHYTAT-----WYQIHVSAAKAAVDSITRSLALEWGTD 149
             GG               S +L Y A+      Y   +S+AKAA++S TR LA E G  
Sbjct: 169 NPGGA--------------SISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRK 214

Query: 150 YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA---TDYMAAYKFG--------EKWDIAMA 198
           Y IRVN I+ GP+   A           +KA    D M  Y +            ++  A
Sbjct: 215 YKIRVNTISAGPLGSRA-----------AKAIGFIDDMIEYSYANAPLQKELTADEVGNA 263

Query: 199 ALYLASDAGKYVNGNTLIVDGG 220
           A +LAS     + G T+ VD G
Sbjct: 264 AAFLASPLASAITGATIYVDNG 285

Length = 303

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 58.2 bits (141), Expect = 4e-10
 Identities = 57/227 (25%), Positives = 93/227 (40%), Gaps = 18/227 (7%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA---- 57
                     VA + + G  AI  + D+ +  D   +++     FG+LD LVN A     
Sbjct: 33  LPDDDQATEVVAEVLAAGRRAIYFQADIGELSDHEALLDQAWEDFGRLDCLVNNAGIAVR 92

Query: 58  --GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE-ALKYLKKGGRGQASSSSGGIIINIS 114
             G+ L    DL+ + F  +I I+  G F +    A + +++  R      S   II ++
Sbjct: 93  PRGDLL----DLTEDSFDRLIAINLRGPFFLTQAVARRMVEQPDRFDGPHRS---IIFVT 145

Query: 115 ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE 174
           +   Y  +  +     +KA +   TR LA     D  I V+ I PG I     ++    E
Sbjct: 146 SINAYLVSPNRGEYCISKAGLSMATRLLAYRLA-DEGIAVHEIRPGLIH--TDMTAPVKE 202

Query: 175 EIRSKATDYMAAY-KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           +        +    ++G+  DIA A   LAS    Y  G  + +DGG
Sbjct: 203 KYDELIAAGLVPIRRWGQPEDIAKAVRTLASGLLPYSTGQPINIDGG 249

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 57.6 bits (139), Expect = 5e-10
 Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 19/193 (9%)

Query: 32  REDAVRVVESTINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           R++   + +        +DILVN A     G F+     +S   + +V+E++   TF + 
Sbjct: 64  RDEVKALGQKAEADLEGVDILVNNAGITKDGLFV----RMSDEDWDSVLEVNLTATFRLT 119

Query: 88  HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 147
            E    + +   G+        IINI++ +  T    Q +  A+KA +   ++SLA E  
Sbjct: 120 RELTHPMMRRRYGR--------IINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIA 171

Query: 148 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 207
           T   + VN +APG I ++A   KL  ++ +      +   + G   ++A A  YLAS   
Sbjct: 172 TR-NVTVNCVAPGFI-ESAMTGKLNDKQ-KEAIMGAIPMKRMGTGAEVASAVAYLASSEA 228

Query: 208 KYVNGNTLIVDGG 220
            YV G T+ V+GG
Sbjct: 229 AYVTGQTIHVNGG 241

Length = 245

>gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated

 Score = 57.8 bits (140), Expect = 5e-10
 Identities = 65/243 (26%), Positives = 95/243 (39%), Gaps = 59/243 (24%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA---- 57
           GR +  +R     L+    P++ L  DV+         E+    +GKLDILV+  A    
Sbjct: 45  GRFEKKVRELTEPLN----PSLFLPCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGK 100

Query: 58  ----GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI 113
               G+F       S  GF   +EI +     +C  A   + +GG          I+   
Sbjct: 101 EELIGDF----SATSREGFARALEISAYSLAPLCKAAKPLMSEGG---------SIV--- 144

Query: 114 SATLHYTATWYQIH----VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG-- 167
             TL Y      I     +  AKAA+++  R LA E G    IRVN I+ GPI+  A   
Sbjct: 145 --TLTYLGGVRAIPNYNVMGVAKAALEASVRYLAAELGPK-NIRVNAISAGPIRTLASSA 201

Query: 168 ----------VSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIV 217
                     V + AP  +R   T          + ++   A +L SD    + G T+ V
Sbjct: 202 VGGILDMIHHVEEKAP--LRRTVT----------QTEVGNTAAFLLSDLASGITGQTIYV 249

Query: 218 DGG 220
           D G
Sbjct: 250 DAG 252

Length = 258

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 57.9 bits (140), Expect = 6e-10
 Identities = 46/215 (21%), Positives = 82/215 (38%), Gaps = 18/215 (8%)

Query: 16  HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV 75
              G  A G   D    +  + + +     F ++D+LV +A         D     F   
Sbjct: 48  AEYGEKAYGFGADATNEQSVIALSKGVDEIFKRVDLLVYSAGIAKSAKITDFELGDFDRS 107

Query: 76  IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 135
           ++++ VG F+   E  K + + G         G II I++      + +    SAAK   
Sbjct: 108 LQVNLVGYFLCAREFSKLMIRDG-------IQGRIIQINSKSGKVGSKHNSGYSAAKFGG 160

Query: 136 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP----------EEIRSKATDYMA 185
             +T+SLAL+   ++ I VN +  G +  +     L P           E+     D + 
Sbjct: 161 VGLTQSLALDLA-EHGITVNSLMLGNLLKSPMFQSLLPQYAKKLGIKESEVEQYYIDKVP 219

Query: 186 AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             +  +  D+    L+ AS    Y  G ++ + GG
Sbjct: 220 LKRGCDYQDVLNMLLFYASPKASYCTGQSINITGG 254

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 57.3 bits (139), Expect = 7e-10
 Identities = 35/149 (23%), Positives = 60/149 (40%), Gaps = 26/149 (17%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA--EDLSPNGFRTVIEIDSVGTFI 85
           D+   E+  +     +   G  D++VN A     +P   EDL+   F   ++++  G+  
Sbjct: 62  DLSDYEEVEQAFAQAVEKGGPPDLVVNCAG--ISIPGLFEDLTAEEFERGMDVNYFGSLN 119

Query: 86  MCHEALKYLKKGGRGQASSSSGGIIINISATL------HYTATWYQIHVSAAKAAVDSIT 139
           + H  L  +K+   G         I+ +S+         Y+A  Y      +K A+  + 
Sbjct: 120 VAHAVLPLMKEQRPGH--------IVFVSSQAALVGIYGYSA--Y----CPSKFALRGLA 165

Query: 140 RSLALEWGTDYAIRVNGIAPGPIKDTAGV 168
            SL  E    Y IRV+ + P    DT G 
Sbjct: 166 ESLRQEL-KPYNIRVSVVYPPDT-DTPGF 192

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 57.3 bits (139), Expect = 7e-10
 Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 37/202 (18%)

Query: 33  EDAVRVVESTINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 88
           ED  ++V++ I+ FG++DILVN A      +F   +E+     +  V+ +   G+F +  
Sbjct: 73  EDGEKIVKTAIDAFGRVDILVNNAGILRDRSFAKMSEED----WDLVMRVHLKGSFKVTR 128

Query: 89  EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 148
            A  Y++K           G IIN S+       + Q + SAAK  +  ++ +LA+E G 
Sbjct: 129 AAWPYMRK--------QKFGRIINTSSAAGLYGNFGQANYSAAKLGLLGLSNTLAIE-GA 179

Query: 149 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD---IAMAALYLASD 205
            Y I  N IAP                  S+ T+ +      +      +A   LYL  +
Sbjct: 180 KYNITCNTIAPAA---------------GSRMTETVMPEDLFDALKPEYVAPLVLYLCHE 224

Query: 206 AGKYVNGNTLIVDGGNWLSNPR 227
           + + V G    V  G W+   R
Sbjct: 225 SCE-VTGGLFEVGAG-WIGKLR 244

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 57.1 bits (138), Expect = 1e-09
 Identities = 55/205 (26%), Positives = 78/205 (38%), Gaps = 41/205 (20%)

Query: 27  GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 86
           GDV   E A  V+E        +D LV    G      E+ S  G   ++          
Sbjct: 60  GDVSSTESARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFS--GLEEMLTNHIKIPLYA 117

Query: 87  CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 146
            + +L++LK+G      SS  GI         Y A+  Q+  + AKA +      LA E 
Sbjct: 118 VNASLRFLKEGSSIVLVSSMSGI---------YKASPDQLSYAVAKAGLAKAVEILASEL 168

Query: 147 GTDYAIRVNGIAPG-------PIKDTAGVSKL----APEEIRSKATDYMAAYKFGEKWDI 195
                IRVNGIAP        P ++   + KL    AP E                  D 
Sbjct: 169 -LGRGIRVNGIAPTTISGDFEPERNWKKLRKLGDDMAPPE------------------DF 209

Query: 196 AMAALYLASDAGKYVNGNTLIVDGG 220
           A   ++L +D   +V+G  + VDGG
Sbjct: 210 AKVIIWLLTDEADWVDGVVIPVDGG 234

Length = 238

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 56.9 bits (137), Expect = 1e-09
 Identities = 53/217 (24%), Positives = 93/217 (42%), Gaps = 15/217 (6%)

Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS 68
               A + + G  A     D+  R+     V +     G +D+LVN A  +   P     
Sbjct: 41  EKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTE 100

Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 128
           P  +  +I I+  G   M H  L  + + G G+        I+NI++      +  +   
Sbjct: 101 PPLWERLIAINLTGALHMHHAVLPGMVERGAGR--------IVNIASDAARVGSSGEAVY 152

Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDY 183
           +A K  + + ++++A E    + I VN + PGP  DTA +  +      PE++R   T  
Sbjct: 153 AACKGGLVAFSKTMAREHAR-HGITVNVVCPGP-TDTALLDDICGGAENPEKLREAFTRA 210

Query: 184 MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           +   + G+  D+  A L+ +SD   ++ G  L V GG
Sbjct: 211 IPLGRLGQPDDLPGAILFFSSDDASFITGQVLSVSGG 247

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 57.5 bits (139), Expect = 1e-09
 Identities = 58/215 (26%), Positives = 92/215 (42%), Gaps = 17/215 (7%)

Query: 10  SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSP 69
             +  + + G  A+ + GD+ +R  A  +V + +   G LDI+VN A         ++S 
Sbjct: 52  DVLDEIRAAGAKAVAVAGDISQRATADELVATAVG-LGGLDIVVNNAGITRDRMLFNMSD 110

Query: 70  NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSG---GIIINISATLHYTATWYQI 126
             +  VI +   G F++   A  Y     R +A ++ G   G I+N S+         Q 
Sbjct: 111 EEWDAVIAVHLRGHFLLTRNAAAYW----RAKAKAAGGPVYGRIVNTSSEAGLVGPVGQA 166

Query: 127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP-GPIKDTAGVSKLAPEEIRSKATDYMA 185
           +  AAKA + ++T S A   G  Y +R N I P      TA V   AP+ + +   D ++
Sbjct: 167 NYGAAKAGITALTLSAARALGR-YGVRANAICPRARTAMTADVFGDAPD-VEAGGIDPLS 224

Query: 186 AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                    +     +LAS A   VNG   IV G 
Sbjct: 225 PEH------VVPLVQFLASPAAAEVNGQVFIVYGP 253

Length = 306

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 56.8 bits (138), Expect = 1e-09
 Identities = 50/206 (24%), Positives = 88/206 (42%), Gaps = 27/206 (13%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           DV       +V +  +   G LD+LVNAA    +   + LS   ++    +++ G F + 
Sbjct: 56  DVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLF 115

Query: 88  HEALKYLKKGGRGQ----ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 143
              +   ++   G      S+++    I ++A        Y     A+KAA+ S+ + + 
Sbjct: 116 RAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAA--------Y----GASKAALTSLAKCVG 163

Query: 144 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT--DYMAAYKFG-------EKWD 194
           LE    Y +R N ++PG   DT     L  +E   +     +   +K G          +
Sbjct: 164 LELA-PYGVRCNVVSPGS-TDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQE 221

Query: 195 IAMAALYLASDAGKYVNGNTLIVDGG 220
           IA A L+LASD   ++    ++VDGG
Sbjct: 222 IANAVLFLASDLASHITLQDIVVDGG 247

Length = 252

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 57.0 bits (138), Expect = 1e-09
 Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 13/136 (9%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           DV  R      VE+ + HFG+LDI+VN A        E+++ +  R  I+ +  G   + 
Sbjct: 57  DVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVT 116

Query: 88  HEALKYLKKGGRGQ--ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 145
              L YL++   G     SS GGI     + ++           A+K A++ ++ +LA E
Sbjct: 117 QAVLPYLREQRSGHIIQISSIGGISAFPMSGIY----------HASKWALEGMSEALAQE 166

Query: 146 WGTDYAIRVNGIAPGP 161
              ++ I+V  + PG 
Sbjct: 167 -VAEFGIKVTLVEPGG 181

Length = 275

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 56.2 bits (136), Expect = 2e-09
 Identities = 41/163 (25%), Positives = 68/163 (41%), Gaps = 17/163 (10%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--- 57
           + R +  L++    + + G+  +    DV   E+    +E   N  G +DIL+N A    
Sbjct: 37  LARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSIDILINNAGISK 96

Query: 58  -GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 116
            G FL    +L P  +  +I+++ +G +      L  + +   G         IINIS+T
Sbjct: 97  FGKFL----ELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGD--------IINISST 144

Query: 117 LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP 159
                       SA+K  V  +T SL  E    + IRV  + P
Sbjct: 145 AGQKGAAVTSAYSASKFGVLGLTESLMQEV-RKHNIRVTALTP 186

Length = 239

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 56.3 bits (136), Expect = 2e-09
 Identities = 47/213 (22%), Positives = 89/213 (41%), Gaps = 16/213 (7%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
           VAA+ + G  A+  + D+       ++ +     FG+ DI +N        P  ++S   
Sbjct: 53  VAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAE 112

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 131
           +  +  ++S   F    EA ++L   G+          I+ +  +L    T +    + +
Sbjct: 113 YDEMFAVNSKSAFFFIKEAGRHLNDNGK----------IVTLVTSLLGAFTPFYSAYAGS 162

Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM--AAYKF 189
           KA V+  TR+ + E+G    I V  + PGP+       +   E +    T        K 
Sbjct: 163 KAPVEHFTRAASKEFG-ARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKT 221

Query: 190 G--EKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           G  +  DI     +L +D G ++ G T++++GG
Sbjct: 222 GLTDIEDIVPFIRFLVTD-GWWITGQTILINGG 253

Length = 257

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 56.2 bits (136), Expect = 2e-09
 Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 14/196 (7%)

Query: 25  LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 84
           +E D+ +     RV  +     G   IL+N AA +     E+L+         ++   T 
Sbjct: 72  MEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATM 131

Query: 85  IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
           ++     K        Q    +GG IIN+++         ++  +A K A+++ T+SLA 
Sbjct: 132 LLSSAFAK--------QYDGKAGGRIINLTSGQSLGPMPDELAYAATKGAIEAFTKSLAP 183

Query: 145 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 204
           E   +  I VN + PGP  DT  ++    EE++          + GE  D A    +L S
Sbjct: 184 ELA-EKGITVNAVNPGPT-DTGWIT----EELKHHLVPKFPQGRVGEPVDAARLIAFLVS 237

Query: 205 DAGKYVNGNTLIVDGG 220
           +  K++ G  +  +GG
Sbjct: 238 EEAKWITGQVIHSEGG 253

Length = 256

>gnl|CDD|235776 PRK06300, PRK06300, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 56.4 bits (136), Expect = 2e-09
 Identities = 52/190 (27%), Positives = 80/190 (42%), Gaps = 21/190 (11%)

Query: 38  VVESTINHFGKLDILVNAAAGNFLV--PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLK 95
           V E     FG +DILV++ A +  +  P  + S  G+   +   S     +       + 
Sbjct: 109 VAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMN 168

Query: 96  KGGRGQASSSSGGIIINISATLHYTATW-----YQIHVSAAKAAVDSITRSLALEWGTDY 150
            GG               + +L Y A+      Y   +S+AKAA++S T+ LA E G  +
Sbjct: 169 PGGS--------------TISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRW 214

Query: 151 AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYV 210
            IRVN I+ GP+   AG +    E +     D+    +  E   +  AA +L S     +
Sbjct: 215 GIRVNTISAGPLASRAGKAIGFIERMVDYYQDWAPLPEPMEAEQVGAAAAFLVSPLASAI 274

Query: 211 NGNTLIVDGG 220
            G TL VD G
Sbjct: 275 TGETLYVDHG 284

Length = 299

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 55.6 bits (134), Expect = 3e-09
 Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 19/183 (10%)

Query: 47  GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSS 106
           G +D LVN A        + LS   +     ++  G F +      ++K           
Sbjct: 67  GPIDALVNCAGVLRPGATDPLSTEDWEQTFAVNVTGVFNLLQAVAPHMKDRR-------- 118

Query: 107 GGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 166
            G I+ +++   +          A+KAA+ S+++ L LE    Y +R N ++PG   DTA
Sbjct: 119 TGAIVTVASNAAHVPRISMAAYGASKAALASLSKCLGLELA-PYGVRCNVVSPGS-TDTA 176

Query: 167 GVSKLAPEE------IRSKATDY---MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIV 217
               L  +E      I      +   +   K  +  DIA A L+LASD   ++  + L+V
Sbjct: 177 MQRTLWHDEDGAAQVIAGVPEQFRLGIPLGKIAQPADIANAVLFLASDQAGHITMHDLVV 236

Query: 218 DGG 220
           DGG
Sbjct: 237 DGG 239

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 55.1 bits (133), Expect = 4e-09
 Identities = 41/118 (34%), Positives = 57/118 (48%), Gaps = 11/118 (9%)

Query: 108 GIIINI-SATLH--YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD 164
           G I+NI S  +      T Y    SAAK+A+   TR+ ALE    Y I VN +APGPI +
Sbjct: 120 GRIVNICSRAIFGALDRTSY----SAAKSALVGCTRTWALELAE-YGITVNAVAPGPI-E 173

Query: 165 TAGVSKLAP--EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           T    +  P   E   +    +   + G   ++A A  +L SD   ++ G  L VDGG
Sbjct: 174 TELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFLLSDDAGFITGQVLGVDGG 231

Length = 234

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 55.2 bits (133), Expect = 4e-09
 Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 7/96 (7%)

Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD---TAGVS-KLAPEEIRSKATDYM 184
           + +K A+   TR  A  W     +RVN +APGP++     A +      E + +  T   
Sbjct: 152 AGSKEALTVWTRRRAATWLYGAGVRVNTVAPGPVETPILQAFLQDPRGGESVDAFVTPMG 211

Query: 185 AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                 E  +IA    +LASDA  ++NG  L VDGG
Sbjct: 212 RR---AEPDEIAPVIAFLASDAASWINGANLFVDGG 244

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 54.8 bits (132), Expect = 6e-09
 Identities = 51/208 (24%), Positives = 87/208 (41%), Gaps = 14/208 (6%)

Query: 15  LHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRT 74
           L   G+    +E D+ + +    ++       G   ILVN AA +      +L+      
Sbjct: 63  LLKNGVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDK 122

Query: 75  VIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAA 134
              ++   T ++  +  +   K         SGG IIN+++         ++  +A K A
Sbjct: 123 HYMVNVRATTLLSSQFARGFDKK--------SGGRIINMTSGQFQGPMVGELAYAATKGA 174

Query: 135 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 194
           +D++T SLA E      I VN I PGP  DT  ++    EEI+          + GE  D
Sbjct: 175 IDALTSSLAAEVAH-LGITVNAINPGP-TDTGWMT----EEIKQGLLPMFPFGRIGEPKD 228

Query: 195 IAMAALYLASDAGKYVNGNTLIVDGGNW 222
            A    +LAS+  +++ G  +  +GG  
Sbjct: 229 AARLIKFLASEEAEWITGQIIHSEGGFK 256

Length = 256

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score = 54.5 bits (131), Expect = 7e-09
 Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 14/205 (6%)

Query: 18  LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGN-FLVPAEDLSPNGFRTV 75
           LG  A  +  DV         V   +  FG+LD LV NAA  +      E LS   +  V
Sbjct: 54  LGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRV 113

Query: 76  IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 135
           + ++  G  ++      YL+         +  G I+N+++T    +       +A+K  +
Sbjct: 114 LAVNLTGPMLLAKHCAPYLR---------AHNGAIVNLASTRARQSEPDTEAYAASKGGL 164

Query: 136 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 195
            ++T +LA+  G +  IRVN ++PG I D    S+   E +         A + G   D+
Sbjct: 165 LALTHALAISLGPE--IRVNAVSPGWI-DARDPSQRRAEPLSEADHAQHPAGRVGTVEDV 221

Query: 196 AMAALYLASDAGKYVNGNTLIVDGG 220
           A    +L S    +V G   +VDGG
Sbjct: 222 AAMVAWLLSRQAGFVTGQEFVVDGG 246

Length = 255

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 54.3 bits (131), Expect = 1e-08
 Identities = 63/249 (25%), Positives = 98/249 (39%), Gaps = 49/249 (19%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
             +  L +A   L   G      E DV  RE +V+ + +T    G +  LV+ A    + 
Sbjct: 32  YNEENLEAAAKTLREAGFDVSTQEVDVSSRE-SVKALAATAQTLGPVTGLVHTAG---VS 87

Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGG-----IIINISATL 117
           P++  SP     ++++D  GT ++  E  K +  GG G   +S  G     +       L
Sbjct: 88  PSQ-ASP---EAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERAL 143

Query: 118 HYTAT-------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA 158
             T T                    YQI    AK A      + A++WG   A R+N I+
Sbjct: 144 ATTPTEELLSLPFLQPDAIEDSLHAYQI----AKRANALRVMAEAVKWGERGA-RINSIS 198

Query: 159 PGPIKDTAGVSKLAPEEIRSKATDYM-------AAYKFGEKWDIAMAALYLASDAGKYVN 211
           PG I      + LA +E+     D          A + G   +IA  A +L    G ++ 
Sbjct: 199 PGII-----STPLAQDELNGPRGDGYRNMFAKSPAGRPGTPDEIAALAEFLMGPRGSFIT 253

Query: 212 GNTLIVDGG 220
           G+  +VDGG
Sbjct: 254 GSDFLVDGG 262

Length = 275

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 53.9 bits (130), Expect = 2e-08
 Identities = 54/216 (25%), Positives = 90/216 (41%), Gaps = 16/216 (7%)

Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA---AGNFLVPAE 65
           ++ V  + + G  A+    D+   + A  +V++ +  FG LD+LVN A       +    
Sbjct: 53  QAVVDEIVAAGGEAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIA--- 109

Query: 66  DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 125
           ++S   +  VI +   G F     A  Y +     +A  +    IIN S+      +  Q
Sbjct: 110 NMSEEEWDAVIAVHLKGHFATLRHAAAYWR--AESKAGRAVDARIINTSSGAGLQGSVGQ 167

Query: 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP-IKDTAGVSKLAPEEIRSKATDYM 184
            + SAAKA + ++T   A E G  Y + VN IAP    + T  V      +      D M
Sbjct: 168 GNYSAAKAGIAALTLVAAAELGR-YGVTVNAIAPAARTRMTETVFAEMMAKPEEGEFDAM 226

Query: 185 AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           A        +++   ++L S   + V G    V+GG
Sbjct: 227 APE------NVSPLVVWLGSAESRDVTGKVFEVEGG 256

Length = 286

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 52.2 bits (125), Expect = 4e-08
 Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 17/221 (7%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
             ++   S V+A+ + G  A  L+ DV  R     ++E+ I   G    +V  A      
Sbjct: 31  SGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGVVLNAGITRDA 90

Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEA---LKYLKKGGRGQASSSSGGIIINISATLHY 119
               LS   +  VI  +  G + + H     +   ++GGR    +S  G++ N       
Sbjct: 91  AFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRG----- 145

Query: 120 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 179
                Q++ SAAKA +   T++LA+E      I VN IAPG I DT  ++++  E    +
Sbjct: 146 -----QVNYSAAKAGLIGATKALAVELAKR-KITVNCIAPGLI-DTEMLAEV--EHDLDE 196

Query: 180 ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           A   +   + G+  ++A  A +L SD   YV    + V+GG
Sbjct: 197 ALKTVPMNRMGQPAEVASLAGFLMSDGASYVTRQVISVNGG 237

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 51.8 bits (124), Expect = 6e-08
 Identities = 39/175 (22%), Positives = 68/175 (38%), Gaps = 26/175 (14%)

Query: 45  HFGKLD-ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQAS 103
           ++ +LD +L NA     + P  + +P  ++ V +++   TF++    L  L K       
Sbjct: 81  NYPRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNVNATFMLTQALLPLLLK------- 133

Query: 104 SSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 163
            S  G ++  S+++           + +K A + + + LA E+     +RVN I PG   
Sbjct: 134 -SDAGSLVFTSSSVGRQGRANWGAYAVSKFATEGLXQVLADEY-QQRNLRVNCINPGGT- 190

Query: 164 DTAGVSKLAPEE---IRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTL 215
            TA  +   P E         D M  Y            L+L  D  +   G T 
Sbjct: 191 RTAMRASAFPTEDPQKLKTPADIMPLY------------LWLMGDDSRRKTGMTF 233

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|181416 PRK08415, PRK08415, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 51.7 bits (124), Expect = 7e-08
 Identities = 63/214 (29%), Positives = 85/214 (39%), Gaps = 45/214 (21%)

Query: 26  EGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTVIE 77
           E DV K E    + ES     GK+D +V++ A        G+FL    + S   F   +E
Sbjct: 61  ELDVSKPEHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFL----ETSKEAFNIAME 116

Query: 78  IDSVGTFIMCHEALK-YLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVD 136
           I SV + I    AL   L  G      S  GG+        HY        +  AKAA++
Sbjct: 117 I-SVYSLIELTRALLPLLNDGASVLTLSYLGGV----KYVPHYNV------MGVAKAALE 165

Query: 137 SITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEK---- 192
           S  R LA++ G    IRVN I+ GPIK  A           S   D+    K+ E     
Sbjct: 166 SSVRYLAVDLGKK-GIRVNAISAGPIKTLAA----------SGIGDFRMILKWNEINAPL 214

Query: 193 ------WDIAMAALYLASDAGKYVNGNTLIVDGG 220
                  ++  + +YL SD    V G    VD G
Sbjct: 215 KKNVSIEEVGNSGMYLLSDLSSGVTGEIHYVDAG 248

Length = 274

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 50.2 bits (120), Expect = 1e-07
 Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 10/133 (7%)

Query: 48  KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSG 107
           + D++V+ AA        DL+ +     I  + VGT  +   A + +K    G+      
Sbjct: 31  RRDVVVHNAAILDDGRLIDLTGSRIERAIRANVVGTRRLLEAARELMKAKRLGR------ 84

Query: 108 GIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG 167
              I IS+             +A+KAA+D + +  A E G    +    +A G    +  
Sbjct: 85  --FILISSVAGLFGAPGLGGYAASKAALDGLAQQWASE-GWGNGLPATAVACGTWAGSGM 141

Query: 168 VS-KLAPEEIRSK 179
               +APEEI   
Sbjct: 142 AKGPVAPEEILGN 154

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 51.1 bits (123), Expect = 1e-07
 Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 9/139 (6%)

Query: 25  LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 84
           LE DV         V+  I   G++D+LVN A       AE+ S    + + + +  G  
Sbjct: 50  LELDVTDDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGIL 109

Query: 85  IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
            M    L +++  G G+        IINIS+ L +    Y    +A+K AV+  + SL  
Sbjct: 110 RMTRAVLPHMRAQGSGR--------IINISSVLGFLPAPYMALYAASKHAVEGYSESLDH 161

Query: 145 EWGTDYAIRVNGIAPGPIK 163
           E    + IRV+ + P   K
Sbjct: 162 EVRQ-FGIRVSLVEPAYTK 179

Length = 270

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 50.4 bits (121), Expect = 2e-07
 Identities = 58/227 (25%), Positives = 94/227 (41%), Gaps = 35/227 (15%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA--- 64
           L + + A H  G+       D+   E   ++        G +DILVN A     +P    
Sbjct: 47  LAADLRAAH--GVDVAVHALDLSSPEAREQLAAEA----GDIDILVNNAGA---IPGGGL 97

Query: 65  EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI--SATLHYTAT 122
           +D+    +R   E+   G   +   A   +K   RG       G+I+N+  +A  +  A 
Sbjct: 98  DDVDDAAWRAGWELKVFGYIDLTRLAYPRMK--ARG------SGVIVNVIGAAGENPDAD 149

Query: 123 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR----- 177
           +  I  SA  AA+ + TR+L  +   D  +RV G+ PGP+  T  +  L     R     
Sbjct: 150 Y--ICGSAGNAALMAFTRALGGK-SLDDGVRVVGVNPGPVA-TDRMLTLLKGRARAELGD 205

Query: 178 -SKATDYMAAYKFG---EKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            S+  + +A    G      ++A    +LAS    Y +G  + VDGG
Sbjct: 206 ESRWQELLAGLPLGRPATPEEVADLVAFLASPRSGYTSGTVVTVDGG 252

Length = 259

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 49.9 bits (120), Expect = 3e-07
 Identities = 45/169 (26%), Positives = 65/169 (38%), Gaps = 16/169 (9%)

Query: 4   RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP 63
           R    R+   ALH     A+    DV   +    VV      FG +D+LVN A       
Sbjct: 36  RSEAARADFEALH--PDRALARLLDVTDFDAIDAVVADAEATFGPIDVLVNNAGYGHEGA 93

Query: 64  AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ--ASSSSGGIIINISATLHYTA 121
            E+      R   E++  G   M    L  ++   RG     +S GG+I       +Y  
Sbjct: 94  IEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITM-PGIGYYCG 152

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK-DTAGVS 169
           +         K A++ I+ SLA E    + I V  + PG  + D AG S
Sbjct: 153 S---------KFALEGISESLAKEVA-PFGIHVTAVEPGSFRTDWAGRS 191

Length = 277

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 49.8 bits (119), Expect = 3e-07
 Identities = 46/184 (25%), Positives = 74/184 (40%), Gaps = 17/184 (9%)

Query: 39  VESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG 98
           V   +   G LDILV  A       A +L  +    + +I+    +    EA + + +GG
Sbjct: 66  VIDVVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGG 125

Query: 99  RGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA 158
           R     S  G  + ++    Y A+         K+A+  + R LA ++G    I +N + 
Sbjct: 126 RIIIIGSVNGDRMPVAGMAAYAAS---------KSALQGMARGLARDFG-PRGITINVVQ 175

Query: 159 PGPIKDTAGVSKLAPEEIRSKAT--DYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLI 216
           PGPI DT       P     K     +MA  + G   ++A    +LA     +V G    
Sbjct: 176 PGPI-DT----DANPANGPMKDMMHSFMAIKRHGRPEEVAGMVAWLAGPEASFVTGAMHT 230

Query: 217 VDGG 220
           +DG 
Sbjct: 231 IDGA 234

Length = 237

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 49.3 bits (118), Expect = 4e-07
 Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 11/97 (11%)

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA-- 185
             A  AA++++ R LALE      +RVN ++PG + DT   SKLA +  R       A  
Sbjct: 137 QGAINAALEALARGLALELA---PVRVNTVSPGLV-DTPLWSKLAGDA-REAMFAAAAER 191

Query: 186 --AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             A + G+  D+A A L+LA++   +  G+T++VDGG
Sbjct: 192 LPARRVGQPEDVANAILFLAANG--FTTGSTVLVDGG 226

Length = 230

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 48.9 bits (117), Expect = 4e-07
 Identities = 37/148 (25%), Positives = 66/148 (44%), Gaps = 16/148 (10%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           D R  EDA  +V++  + FG++D+LV+ A         + S         I+ +    + 
Sbjct: 53  DARDPEDARALVDALRDRFGRIDVLVHNAGIGRPTTLREGSDAELEAHFSINVIAPAELT 112

Query: 88  HEALKYLKKGGRGQA---SSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
              L  L++ G G+    +S SG  ++  +A             SA+K A+ ++  +L  
Sbjct: 113 RALLPALREAGSGRVVFLNSLSGKRVLAGNAGY-----------SASKFALRALAHALRQ 161

Query: 145 EWGTDYAIRVNGIAPGPIKDTAGVSKLA 172
           E G D+ +RV+ + PG + DT     L 
Sbjct: 162 E-GWDHGVRVSAVCPGFV-DTPMAQGLT 187

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 49.3 bits (118), Expect = 5e-07
 Identities = 35/157 (22%), Positives = 61/157 (38%), Gaps = 17/157 (10%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVN----AAAGNFLVP 63
               +  L   G        DVR       + ++    +G +D++VN    A+ G F   
Sbjct: 37  GEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVIVNNAGVASGGFF--- 93

Query: 64  AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 123
            E+LS   +   I I+ +G    C   L   K+   G+        I+NI++        
Sbjct: 94  -EELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGR--------IVNIASMAGLMQGP 144

Query: 124 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160
                + AKA V +++ +L +E   D  I V+ + P 
Sbjct: 145 AMSSYNVAKAGVVALSETLLVEL-ADDEIGVHVVCPS 180

Length = 270

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 49.1 bits (117), Expect = 5e-07
 Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 12/99 (12%)

Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK--- 188
           + ++  + R+LA E G    I VNGI PG I+ T  V +LA +  + +      A +   
Sbjct: 161 RISMAGLVRTLAKELGP-KGITVNGIMPGIIR-TDRVIQLAQDRAKREGKSVEEALQEYA 218

Query: 189 -------FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                   GE  +I     +LASD G Y+NG  + VDGG
Sbjct: 219 KPIPLGRLGEPEEIGYLVAFLASDLGSYINGAMIPVDGG 257

Length = 263

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 48.9 bits (117), Expect = 6e-07
 Identities = 38/148 (25%), Positives = 61/148 (41%), Gaps = 9/148 (6%)

Query: 1   MGRRKTVLRS-AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN 59
             RR+  L +  V  +   G  A  +  D R  ++ + + +      G L++LV  A  N
Sbjct: 29  AARREAKLEALLVDIIRDAGGSAKAVPTDARDEDEVIALFDLIEEEIGPLEVLVYNAGAN 88

Query: 60  FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 119
              P  + +P  F  V E+ + G F+   EA K +   GRG         II   AT   
Sbjct: 89  VWFPILETTPRVFEKVWEMAAFGGFLAAREAAKRMLARGRGT--------IIFTGATASL 140

Query: 120 TATWYQIHVSAAKAAVDSITRSLALEWG 147
                    + AK A+ ++ +S+A E G
Sbjct: 141 RGRAGFAAFAGAKFALRALAQSMARELG 168

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 48.0 bits (115), Expect = 7e-07
 Identities = 34/172 (19%), Positives = 60/172 (34%), Gaps = 26/172 (15%)

Query: 47  GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSS 106
           G  D +V+ A      P  +L+   F+  +    +G   +    L YL          + 
Sbjct: 53  GHFDAIVSTAGDAEFAPLAELTDADFQRGLNSKLLGQINLVRHGLPYL----------ND 102

Query: 107 GGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 166
           GG I   S  L           +    A++   R+ A+E      IR+N ++PG ++++ 
Sbjct: 103 GGSITLTSGILAQRPIPGGAAAATVNGALEGFVRAAAIELPRG--IRINAVSPGVVEESL 160

Query: 167 GVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVD 218
                          D+   ++     D+A A +     A     G  L VD
Sbjct: 161 EAYG-----------DFFPGFEPVPAEDVAKAYVRSVEGA---FTGQVLHVD 198

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 48.5 bits (116), Expect = 9e-07
 Identities = 46/167 (27%), Positives = 63/167 (37%), Gaps = 19/167 (11%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNF 60
            RR   L    A L +          DV   E    V+       G LD+++ NA  G  
Sbjct: 29  ARRTDRLDELKAELLNPNPSVEVEILDVTDEERNQLVIAELEAELGGLDLVIINAGVG-K 87

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY- 119
                DLS   FR  I+ + +G   +   AL   +  GRG         ++ IS+     
Sbjct: 88  GTSLGDLSFKAFRETIDTNLLGAAAILEAALPQFRAKGRGH--------LVLISSVAALR 139

Query: 120 ---TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 163
               A  Y    SA+KAA+ S+  SL  +      IRV  I PG I 
Sbjct: 140 GLPGAAAY----SASKAALSSLAESLRYDV-KKRGIRVTVINPGFID 181

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 48.2 bits (115), Expect = 9e-07
 Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 17/143 (11%)

Query: 28  DVRKRED-AVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 86
           DV  R   A  + +      G+LD L N A      P ED+       +++I+  G    
Sbjct: 55  DVTDRAAWAAALADFAAATGGRLDALFNNAGVGRGGPFEDVPLAAHDRMVDINVKGVLNG 114

Query: 87  CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV---SAAKAAVDSITRSLA 143
            + AL YLK         + G  +IN +++   +A + Q  +   SA K AV  +T +L 
Sbjct: 115 AYAALPYLKA--------TPGARVINTASS---SAIYGQPDLAVYSATKFAVRGLTEALD 163

Query: 144 LEWGTDYAIRVNGIAPGPIKDTA 166
           +EW   + IRV  + P  + DT 
Sbjct: 164 VEW-ARHGIRVADVWPWFV-DTP 184

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 48.1 bits (114), Expect = 1e-06
 Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 11/204 (5%)

Query: 17  SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVI 76
           +LG   I  EG+V   +      +      G++D+LVN A     V    ++   +  VI
Sbjct: 50  ALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVI 109

Query: 77  EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVD 136
           + +    F +  + +  + + G G+        IINIS+       + Q + S AKA + 
Sbjct: 110 DTNLTSLFNVTKQVIDGMVERGWGR--------IINISSVNGQKGQFGQTNYSTAKAGIH 161

Query: 137 SITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA 196
             T SLA E  T   + VN ++PG I     + K    ++  K    +   + G   +I 
Sbjct: 162 GFTMSLAQEVATK-GVTVNTVSPGYI--GTDMVKAIRPDVLEKIVATIPVRRLGSPDEIG 218

Query: 197 MAALYLASDAGKYVNGNTLIVDGG 220
               +LAS+   +  G    ++GG
Sbjct: 219 SIVAWLASEESGFSTGADFSLNGG 242

Length = 246

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 47.7 bits (114), Expect = 1e-06
 Identities = 47/178 (26%), Positives = 77/178 (43%), Gaps = 28/178 (15%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA---- 57
           GRR+  L  A   L ++      +  DV   E    + E+ ++ +  LDIL+N A     
Sbjct: 36  GRREERLAEAKKELPNIHT----IVLDVGDAESVEALAEALLSEYPNLDILINNAGIQRP 91

Query: 58  GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 117
            +   PA DL  +   T I+ + +G   +    L +LKK  + +A+      I+N+S+ L
Sbjct: 92  IDLRDPASDL--DKADTEIDTNLIGPIRLIKAFLPHLKK--QPEAT------IVNVSSGL 141

Query: 118 HYTATWYQIH--VSAAKAAVDSITRSL--ALEWGTDYAIRVNGIAPGPIKDTAGVSKL 171
            +       +    A KAA+ S T +L   L+   D  + V  I P P  DT    + 
Sbjct: 142 AFVP--MAANPVYCATKAALHSYTLALRHQLK---DTGVEVVEIVP-PAVDTELHEER 193

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 47.3 bits (113), Expect = 2e-06
 Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 19/143 (13%)

Query: 25  LEGDVRKR-EDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVG 82
           LE DV     ++   V   +     LD+L+ NA   +   PA ++       V +++ +G
Sbjct: 52  LELDVTDEIAESAEAVAERL-GDAGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLG 110

Query: 83  TFIMCHEALKYLKKGGRGQASSSSGGIIINISA-----TLHYTATWYQIHVSAAKAAVDS 137
             ++    L  L KG R          IINIS+       + +  WY    S  KAA++ 
Sbjct: 111 PLLLTQAFLPLLLKGAR--------AKIINISSRVGSIGDNTSGGWYSYRAS--KAALNM 160

Query: 138 ITRSLALEWGTDYAIRVNGIAPG 160
           +T+SLA+E   D  I V  + PG
Sbjct: 161 LTKSLAVELKRD-GITVVSLHPG 182

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 46.4 bits (110), Expect = 5e-06
 Identities = 47/206 (22%), Positives = 81/206 (39%), Gaps = 12/206 (5%)

Query: 3   RRKTVLRSAVAALHSLGIPAI-GLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
           RR   + +  A   S G P +   + D+   E  + +  +       +D+ +N A     
Sbjct: 38  RRVDKIEALAAECQSAGYPTLFPYQCDLSNEEQILSMFSAIRTQHQGVDVCINNAGLARP 97

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL-HYT 120
            P       G++ + +++ +   I   EA + +K+           G IINI++   H  
Sbjct: 98  EPLLSGKTEGWKEMFDVNVLALSICTREAYQSMKERNVDD------GHIININSMSGHRV 151

Query: 121 ATWYQIHV-SAAKAAVDSITRSLALEW-GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS 178
                 H  +A K AV ++T  L  E       IR   I+PG + +T    KL   +   
Sbjct: 152 PPVSVFHFYAATKHAVTALTEGLRQELREAKTHIRATSISPGLV-ETEFAFKLHDNDPEK 210

Query: 179 KATDYMAAYKFGEKWDIAMAALYLAS 204
            A  Y +      + D+A A LY+ S
Sbjct: 211 AAATYESIPCLKPE-DVANAVLYVLS 235

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181260 PRK08159, PRK08159, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 46.3 bits (110), Expect = 5e-06
 Identities = 57/205 (27%), Positives = 89/205 (43%), Gaps = 31/205 (15%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTVIEID 79
           DV        V E+    +GKLD +V+A          G ++    D S + F   ++I 
Sbjct: 68  DVTDEASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYV----DTSRDNFTMTMDI- 122

Query: 80  SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH---VSAAKAAVD 136
           SV +F    +         R +   + GG I+ ++   +Y A     H   +  AKAA++
Sbjct: 123 SVYSFTAVAQ---------RAEKLMTDGGSILTLT---YYGAEKVMPHYNVMGVAKAALE 170

Query: 137 SITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD-I 195
           +  + LA++ G    IRVN I+ GPIK T   S +       K  +Y A  +     + +
Sbjct: 171 ASVKYLAVDLGPK-NIRVNAISAGPIK-TLAASGIGDFRYILKWNEYNAPLRRTVTIEEV 228

Query: 196 AMAALYLASDAGKYVNGNTLIVDGG 220
             +ALYL SD  + V G    VD G
Sbjct: 229 GDSALYLLSDLSRGVTGEVHHVDSG 253

Length = 272

>gnl|CDD|236308 PRK08594, PRK08594, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 45.5 bits (108), Expect = 8e-06
 Identities = 52/210 (24%), Positives = 86/210 (40%), Gaps = 35/210 (16%)

Query: 25  LEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTVI 76
           L  DV   E+     E+     G +  + +  A        G FL    + S +GF    
Sbjct: 64  LPCDVTSDEEITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFL----ETSRDGFLLAQ 119

Query: 77  EIDSVGTFIMCHEALKYLKKGGRGQASSSSGG--IIINISATLHYTATWYQIHVSAAKAA 134
            I +     +  EA K + +GG     +  GG  ++ N           Y + +  AKA+
Sbjct: 120 NISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQN-----------YNV-MGVAKAS 167

Query: 135 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTA--GVSKLAP--EEIRSKATDYMAAYKFG 190
           +++  + LA + G D  IRVN I+ GPI+  +  GV       +EI  +A       +  
Sbjct: 168 LEASVKYLANDLGKD-GIRVNAISAGPIRTLSAKGVGGFNSILKEIEERA----PLRRTT 222

Query: 191 EKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            + ++   A +L SD  + V G  + VD G
Sbjct: 223 TQEEVGDTAAFLFSDLSRGVTGENIHVDSG 252

Length = 257

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 45.4 bits (108), Expect = 8e-06
 Identities = 43/197 (21%), Positives = 78/197 (39%), Gaps = 29/197 (14%)

Query: 27  GDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 85
            D+       +++E+     G+ D+L+ NA +   +   E +  +  +   +++      
Sbjct: 56  ADLSDAAGVEQLLEAIRKLDGERDLLINNAGSLGPVSKIEFIDLDELQKYFDLNLTSPVC 115

Query: 86  MCHEALKYLKKGGRGQASSSSGGIIINIS--ATLHYTATWYQIHVSAAKAAVDSITRSLA 143
           +    L+  KK             ++N+S  A ++    W      ++KAA D   R LA
Sbjct: 116 LTSTLLRAFKK-------RGLKKTVVNVSSGAAVNPFKGW--GLYCSSKAARDMFFRVLA 166

Query: 144 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKF------GEKWDIAM 197
            E   +  +RV   APG + DT         EIR  + D     +F      GE  D   
Sbjct: 167 AE---EPDVRVLSYAPGVV-DTDMQR-----EIRETSADPETRSRFRSLKEKGELLDPEQ 217

Query: 198 AALYLAS--DAGKYVNG 212
           +A  LA+  +  K+ +G
Sbjct: 218 SAEKLANLLEKDKFESG 234

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 45.4 bits (108), Expect = 9e-06
 Identities = 36/105 (34%), Positives = 49/105 (46%), Gaps = 12/105 (11%)

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA----GVSKLAPEEI 176
           AT YQ+    +K A+   T   A  W     IRVN +APGP+  T       S L  E +
Sbjct: 134 ATGYQL----SKEALILWTMRQAQPWFGARGIRVNCVAPGPV-FTPILGDFRSMLGQERV 188

Query: 177 RSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN 221
            S A   M      +  + A   ++L SDA +++NG  L VDGG 
Sbjct: 189 DSDAKR-MGRPATAD--EQAAVLVFLCSDAARWINGVNLPVDGGL 230

Length = 241

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 45.0 bits (107), Expect = 1e-05
 Identities = 34/139 (24%), Positives = 56/139 (40%), Gaps = 15/139 (10%)

Query: 10  SAVAALHSLGIPAIGLEG--DVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAED 66
           +A+AA   LG     L    DV          E  +  FG +D++V NA   +       
Sbjct: 47  AALAA--ELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGIDVVVANAGIASG-GSVAQ 103

Query: 67  LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 126
           + P+ FR VI+++ +G F      L  L             G ++ +S+   + A     
Sbjct: 104 VDPDAFRRVIDVNLLGVFHTVRATLPAL---------IERRGYVLQVSSLAAFAAAPGMA 154

Query: 127 HVSAAKAAVDSITRSLALE 145
              A+KA V++   +L LE
Sbjct: 155 AYCASKAGVEAFANALRLE 173

Length = 296

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 56/224 (25%), Positives = 93/224 (41%), Gaps = 26/224 (11%)

Query: 2   GRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA---A 57
           GRR   L+     L +   +  + L+ DV  RE     +E+    F  +DILVN A    
Sbjct: 31  GRRAERLQELADELGAKFPVKVLPLQLDVSDRESIEAALENLPEEFRDIDILVNNAGLAL 90

Query: 58  GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 117
           G  L PA++     + T+I+ +  G   +    L  +    R Q      G IIN+ +  
Sbjct: 91  G--LDPAQEADLEDWETMIDTNVKGLLNVTRLILPIMIA--RNQ------GHIINLGSIA 140

Query: 118 -HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI 176
             Y      ++  A KAAV   + +L  +      IRV  I PG ++    + +   ++ 
Sbjct: 141 GRYPYAGGNVY-CATKAAVRQFSLNLRKDL-IGTGIRVTNIEPGLVETEFSLVRFHGDKE 198

Query: 177 RSKATDYMAAYKFGEKW---DIAMAALYLASDAGKYVNGNTLIV 217
           ++        Y+  E     DIA   L++AS    +VN N + +
Sbjct: 199 KADKV-----YEGVEPLTPEDIAETILWVASRP-AHVNINDIEI 236

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 43.4 bits (103), Expect = 4e-05
 Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 21/176 (11%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
           + R +  L +  A L S G+ A     D+   E     +   +  FG  D+L+N A   +
Sbjct: 36  VARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCPDVLINNAGMAY 95

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
             P  ++  + ++ VI+++    F  C   L  ++  G        GG+IIN+S+     
Sbjct: 96  TGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG--------GGLIINVSSIAARN 147

Query: 121 A--TW--YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG----PIKDTAGV 168
           A   W  Y      +KAA+ + T+ LA E    + IRV  I  G    P+ DT  V
Sbjct: 148 AFPQWGAY----CVSKAALAAFTKCLAEE-ERSHGIRVCTITLGAVNTPLWDTETV 198

Length = 241

>gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs

 Score = 43.3 bits (102), Expect = 4e-05
 Identities = 42/193 (21%), Positives = 70/193 (36%), Gaps = 15/193 (7%)

Query: 33  EDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 91
           +    +V++ +   G +D+LV N      + P +  S    R   E  S+  F +   A+
Sbjct: 57  QKPEELVDAVLQAGGAIDVLVSNDYIPRPMNPIDGTSEADIRQAFEALSIFPFALLQAAI 116

Query: 92  KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 151
             +KK G        G II   SA       +  ++   A+AA  ++  SLA E      
Sbjct: 117 AQMKKAG-------GGSIIFITSAVPKKPLAYNSLY-GPARAAAVALAESLAKELS-RDN 167

Query: 152 IRVNGIAPGPIKDT----AGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 207
           I V  I P              +  P E+R +    +   + G   ++     +LAS   
Sbjct: 168 ILVYAIGPNFFNSPTYFPTSDWENNP-ELRERVKRDVPLGRLGRPDEMGALVAFLASRRA 226

Query: 208 KYVNGNTLIVDGG 220
             + G      GG
Sbjct: 227 DPITGQFFAFAGG 239

Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|180596 PRK06505, PRK06505, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 43.2 bits (102), Expect = 6e-05
 Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 22/108 (20%)

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 190
           AKAA+++  R LA ++G    IRVN I+ GP++  AG          +   D  A + + 
Sbjct: 162 AKAALEASVRYLAADYGPQ-GIRVNAISAGPVRTLAG----------AGIGDARAIFSYQ 210

Query: 191 EKW----------DIAMAALYLASDAGKYVNGNTLIVDGG-NWLSNPR 227
           ++           ++  +ALYL SD    V G    VD G N +S P 
Sbjct: 211 QRNSPLRRTVTIDEVGGSALYLLSDLSSGVTGEIHFVDSGYNIVSMPT 258

Length = 271

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 42.8 bits (101), Expect = 6e-05
 Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 18/162 (11%)

Query: 25  LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 84
           L+ DV   +     VE        +D+LV  A    L P E LS +   +V +++  GT 
Sbjct: 58  LQLDVCDSKSVAAAVERVTE--RHVDVLVCNAGVGLLGPLEALSEDAMASVFDVNVFGTV 115

Query: 85  IMCHEALKYLKKGGRGQ--ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 142
            M    L  +K+ G G+   +SS GG+       L +   +      A+K A++ +  SL
Sbjct: 116 RMLQAFLPDMKRRGSGRILVTSSVGGL-----QGLPFNDVY-----CASKFALEGLCESL 165

Query: 143 ALEWGTDYAIRVNGIAPGPIKDTAGVSKL--APEEIRSKATD 182
           A++    + + ++ I  GP+  TA + K+  +PEE+  +  D
Sbjct: 166 AVQL-LPFNVHLSLIECGPVH-TAFMEKVLGSPEEVLDRTAD 205

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 42.2 bits (100), Expect = 9e-05
 Identities = 48/177 (27%), Positives = 71/177 (40%), Gaps = 28/177 (15%)

Query: 44  NHFGKLD-ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQA 102
             FG+LD +L NA     L P E   P  ++ V++++   TF++    L  L K      
Sbjct: 88  EQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLK------ 141

Query: 103 SSSSGGIIINISATLHY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161
            S +  ++   S+      A W    VS  K A + + + LA E+     +RVN I PG 
Sbjct: 142 -SPAASLVFTSSSVGRQGRANWGAYAVS--KFATEGMMQVLADEY-QGTNLRVNCINPGG 197

Query: 162 IKDTAGVSKLAPEEIRSK---ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTL 215
            + TA  +   P E   K     D M  Y            LYL  D  +  NG + 
Sbjct: 198 TR-TAMRASAFPGEDPQKLKTPEDIMPLY------------LYLMGDDSRRKNGQSF 241

Length = 247

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 55/234 (23%), Positives = 87/234 (37%), Gaps = 49/234 (20%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
            A + +LG  A+ L+ D+    +   +V       G + +LVN A+      A   +   
Sbjct: 51  AAEIRALGRRAVALQADLADEAEVRALVARASAALGPITLLVNNASLFEYDSAASFTRAS 110

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI-------------SATLH 118
           +   +  +    F++     + L    RG        +++N+             S TL 
Sbjct: 111 WDRHMATNLRAPFVLAQAFARALPADARG--------LVVNMIDQRVWNLNPDFLSYTL- 161

Query: 119 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS 178
                       +KAA+ + TR+LA        IRVN I PGP   T    + +PE+   
Sbjct: 162 ------------SKAALWTATRTLAQALAPR--IRVNAIGPGP---TLPSGRQSPEDFAR 204

Query: 179 KATDYMAAYKFG---EKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS-NPRD 228
           +     AA   G      +IA A  YL       V G  + VDGG  L+    D
Sbjct: 205 QH----AATPLGRGSTPEEIAAAVRYLLDAPS--VTGQMIAVDGGQHLAWLTPD 252

Length = 258

>gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 16/95 (16%)

Query: 130 AAKAAVDSITRSLALEWGTDYA--IRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 187
           A+KAA+D++T S A       A  ++VN IAP  I    G         R KA    +  
Sbjct: 150 ASKAALDNMTLSFA----AKLAPEVKVNSIAPALILFNEGDD----AAYRQKALA-KSLL 200

Query: 188 KF--GEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           K   GE+  I +    L S    YV G +L VDGG
Sbjct: 201 KIEPGEEEIIDLVDYLLTSC---YVTGRSLPVDGG 232

Length = 236

>gnl|CDD|235694 PRK06079, PRK06079, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 40.9 bits (96), Expect = 3e-04
 Identities = 54/207 (26%), Positives = 82/207 (39%), Gaps = 29/207 (14%)

Query: 25  LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAE------DLSPNGFRTVIEI 78
           +E DV   E   R   +     GK+D +V+A A  +    E      D S +G+    +I
Sbjct: 60  VECDVASDESIERAFATIKERVGKIDGIVHAIA--YAKKEELGGNVTDTSRDGYALAQDI 117

Query: 79  DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH----VSAAKAA 134
            +     +   A   L  G           I+     TL Y  +   I     +  AKAA
Sbjct: 118 SAYSLIAVAKYARPLLNPGA---------SIV-----TLTYFGSERAIPNYNVMGIAKAA 163

Query: 135 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 194
           ++S  R LA + G    IRVN I+ G +K T  V+ +   +   K +D       G   +
Sbjct: 164 LESSVRYLARDLG-KKGIRVNAISAGAVK-TLAVTGIKGHKDLLKESDSRTVDGVGVTIE 221

Query: 195 -IAMAALYLASDAGKYVNGNTLIVDGG 220
            +   A +L SD    V G+ + VD G
Sbjct: 222 EVGNTAAFLLSDLSTGVTGDIIYVDKG 248

Length = 252

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 40.9 bits (96), Expect = 3e-04
 Identities = 45/227 (19%), Positives = 81/227 (35%), Gaps = 22/227 (9%)

Query: 2   GRRKTV-LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAG- 58
           GR     L      + + G   I +  D    ++   + E       G+LDILVN A   
Sbjct: 34  GRTILPQLPGTAEEIEARGGKCIPVRCDHSDDDEVEALFERVAREQQGRLDILVNNAYAA 93

Query: 59  ------NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIIN 112
                     P  +  P  +  +  +     +     A   + K G+G         I+ 
Sbjct: 94  VQLILVGVAKPFWEEPPTIWDDINNVGLRAHYACSVYAAPLMVKAGKGL--------IVI 145

Query: 113 ISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA 172
           IS +       + +     KAA+D +   +A E    + + V  + PG ++ T  V ++ 
Sbjct: 146 IS-STGGLEYLFNVAYGVGKAAIDRMAADMAHEL-KPHGVAVVSLWPGFVR-TELVLEMP 202

Query: 173 PEEIRSKATDYMAAYKFGEKWD-IAMAALYLASDAG-KYVNGNTLIV 217
            ++  S       A+  GE  +      + LA+D     ++G  LI 
Sbjct: 203 EDDEGSWHAKERDAFLNGETTEYSGRCVVALAADPDLMELSGRVLIT 249

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 39.5 bits (93), Expect = 7e-04
 Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 10/98 (10%)

Query: 50  DILVNAAAGNFLVPAE--DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSG 107
            ILVN    +  +P    +   +  + +I ++ + T  M    L  + K  +G       
Sbjct: 80  GILVNNVGISHSIPEYFLETPEDELQDIINVNVMATLKMTRLILPGMVKRKKG------- 132

Query: 108 GIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 145
             I+NIS+      T      SA+KA +D  +R+L  E
Sbjct: 133 -AIVNISSFAGLIPTPLLATYSASKAFLDFFSRALYEE 169

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|169553 PRK08690, PRK08690, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 39.6 bits (92), Expect = 7e-04
 Identities = 50/210 (23%), Positives = 84/210 (40%), Gaps = 24/210 (11%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVN--------AAAGNFLVPAEDLSPNGFRTVIEID 79
           DV   ++  +V      H+  LD LV+        A +G+FL   + +S   F T  EI 
Sbjct: 64  DVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFL---DSISREAFNTAHEIS 120

Query: 80  SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 139
           +  +     +A + + +G      + S   +  + A  +Y        +  AKA++++  
Sbjct: 121 AY-SLPALAKAARPMMRGRNSAIVALS--YLGAVRAIPNYNV------MGMAKASLEAGI 171

Query: 140 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 199
           R  A   G +  IR NGI+ GPIK  A        ++      +    +     ++   A
Sbjct: 172 RFTAACLGKE-GIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTA 230

Query: 200 LYLASDAGKYVNGNTLIVDGG---NWLSNP 226
            +L SD    + G    VDGG   N LS  
Sbjct: 231 AFLLSDLSSGITGEITYVDGGYSINALSTE 260

Length = 261

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 38.8 bits (91), Expect = 0.001
 Identities = 42/156 (26%), Positives = 65/156 (41%), Gaps = 19/156 (12%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
           +  L SLG+  + L  DV         V++ I   G++D+LVN A        ED+  + 
Sbjct: 40  MEDLASLGVHPLSL--DVTDEASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDE 97

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT----LHYTATWYQIH 127
            R   E++  G   +    L +++    G+        IINIS+           WY   
Sbjct: 98  ARRQFEVNLFGAARLTQLVLPHMRAQRSGR--------IINISSMGGKIYTPLGAWYH-- 147

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 163
             A K A++  + +L LE    + I V  I PG IK
Sbjct: 148 --ATKFALEGFSDALRLEVA-PFGIDVVVIEPGGIK 180

Length = 273

>gnl|CDD|168626 PRK06603, PRK06603, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 38.1 bits (88), Expect = 0.002
 Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 3/91 (3%)

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 190
           AKAA+++  + LA + G +  IRVN I+ GPIK  A  S +       K+    A  K  
Sbjct: 163 AKAALEASVKYLANDMGEN-NIRVNAISAGPIKTLAS-SAIGDFSTMLKSHAATAPLKRN 220

Query: 191 E-KWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             + D+  AA+YL S+  K V G    VD G
Sbjct: 221 TTQEDVGGAAVYLFSELSKGVTGEIHYVDCG 251

Length = 260

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 38.0 bits (88), Expect = 0.002
 Identities = 38/138 (27%), Positives = 58/138 (42%), Gaps = 27/138 (19%)

Query: 47  GKLDILVNAAAGNFLVPAEDLSPNGFRTVIE------IDSVGTFIMCHEALKYLKKGGRG 100
           GKLD +V+ A   +      LSP  F+TV E      I++V    +       LK+    
Sbjct: 86  GKLDGIVHCAGYFYA-----LSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQ---- 136

Query: 101 QASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160
             S  +  I +  S      A W      A+KAA++ + +  A EW     +R N + PG
Sbjct: 137 --SPDASVIFVGESHGETPKAYWGGF--GASKAALNYLCKVAADEWERFGNLRANVLVPG 192

Query: 161 PIKDTAGVSKLAPEEIRS 178
           PI         +P+ I+S
Sbjct: 193 PIN--------SPQRIKS 202

Length = 239

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 38.2 bits (89), Expect = 0.002
 Identities = 39/175 (22%), Positives = 66/175 (37%), Gaps = 12/175 (6%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
           RR       V  + + G  A+    DV   +     V       G++++LV+ A   +  
Sbjct: 42  RRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIEVLVSGAGDTYFG 101

Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 122
              ++S   F + ++I  VG   +    L        G      G +I   S        
Sbjct: 102 KLHEISTEQFESQVQIHLVGANRLATAVLP-------GMIERRRGDLIFVGSDVALRQRP 154

Query: 123 WYQIHVSAAKAAVDSITRSLALEW-GTDYAIRVNGIAPGPIKDTAGVSKLAPEEI 176
               +  AAKA ++++  +L +E  GT   +R + + PGP     G S L  E I
Sbjct: 155 HMGAYG-AAKAGLEAMVTNLQMELEGT--GVRASIVHPGPTLTGMGWS-LPAEVI 205

Length = 274

>gnl|CDD|236124 PRK07889, PRK07889, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 38.0 bits (89), Expect = 0.003
 Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 1/36 (2%)

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 166
           AKAA++S  R LA + G    IRVN +A GPI+  A
Sbjct: 161 AKAALESTNRYLARDLGPR-GIRVNLVAAGPIRTLA 195

Length = 256

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 37.8 bits (88), Expect = 0.003
 Identities = 48/175 (27%), Positives = 68/175 (38%), Gaps = 33/175 (18%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF- 60
           GRR+  L+        LG      + DVR R     ++ S    +  +D+LVN A     
Sbjct: 31  GRRQERLQELKD---ELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNNAGLALG 87

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
           L PA   S   + T+I+ ++ G   M    L  + +   G         IINI +T    
Sbjct: 88  LEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGH--------IINIGST---A 136

Query: 121 ATW-------YQIHVSAAKAAVDSITRSLALEWGTDY---AIRVNGIAPGPIKDT 165
            +W       Y     A KA V    R  +L   TD    A+RV  I PG +  T
Sbjct: 137 GSWPYAGGNVY----GATKAFV----RQFSLNLRTDLHGTAVRVTDIEPGLVGGT 183

Length = 248

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 37.8 bits (88), Expect = 0.003
 Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 3/93 (3%)

Query: 34  DAVR-VVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALK 92
            AVR VV+      G++D++V+ A       AE+LS    R  I+ + +G+  +   AL 
Sbjct: 61  AAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALP 120

Query: 93  YLKK--GGRGQASSSSGGIIINISATLHYTATW 123
           +L++  GGR    SS GG I     +L++   W
Sbjct: 121 HLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKW 153

Length = 276

>gnl|CDD|180789 PRK06997, PRK06997, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 37.5 bits (87), Expect = 0.004
 Identities = 55/216 (25%), Positives = 77/216 (35%), Gaps = 46/216 (21%)

Query: 25  LEGDVRKREDAVRVVESTINHFGKLDILVN--------AAAGNFLVPAEDLSPNGFRTVI 76
              DV   E    +  S   H+  LD LV+        A AG+FL   + LS   FR   
Sbjct: 61  FPCDVASDEQIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFL---DGLSRENFRIAH 117

Query: 77  EIDSVGTFIMCHEALKYLKKGGRGQASSSSGG--IIINISATLHYTATWYQIHVSAAKAA 134
           +I +     +   AL  L         S  G   ++ N +             +  AKA+
Sbjct: 118 DISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVPNYNT------------MGLAKAS 165

Query: 135 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEK-- 192
           +++  R LA+  G    IR NGI+ GPIK  A           S   D+     F E   
Sbjct: 166 LEASVRYLAVSLGPK-GIRANGISAGPIKTLAA----------SGIKDFGKILDFVESNA 214

Query: 193 --------WDIAMAALYLASDAGKYVNGNTLIVDGG 220
                    ++   A +L SD    V G    VD G
Sbjct: 215 PLRRNVTIEEVGNVAAFLLSDLASGVTGEITHVDSG 250

Length = 260

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	257
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.98
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.98
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.98
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.97
PRK12939	250	short chain dehydrogenase; Provisional	99.97
PRK07890	258	short chain dehydrogenase; Provisional	99.97
PRK12937	245	short chain dehydrogenase; Provisional	99.97
PRK07814	263	short chain dehydrogenase; Provisional	99.97
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.97
PRK07069	251	short chain dehydrogenase; Validated	99.97
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.97
PRK06483	236	dihydromonapterin reductase; Provisional	99.97
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.97
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.97
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.97
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.97
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.97
PRK06701	290	short chain dehydrogenase; Provisional	99.97
PRK06500	249	short chain dehydrogenase; Provisional	99.97
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK12744	257	short chain dehydrogenase; Provisional	99.97
PRK06123	248	short chain dehydrogenase; Provisional	99.97
PRK05717	255	oxidoreductase; Validated	99.97
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.97
PRK05599	246	hypothetical protein; Provisional	99.97
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.97
PRK08628	258	short chain dehydrogenase; Provisional	99.97
PRK05872	296	short chain dehydrogenase; Provisional	99.97
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.97
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.97
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.97
PRK05875	276	short chain dehydrogenase; Provisional	99.97
PRK06523	260	short chain dehydrogenase; Provisional	99.97
PRK06484	520	short chain dehydrogenase; Validated	99.97
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.97
PRK06138	252	short chain dehydrogenase; Provisional	99.97
PRK06198	260	short chain dehydrogenase; Provisional	99.97
PRK12746	254	short chain dehydrogenase; Provisional	99.97
PRK06139	330	short chain dehydrogenase; Provisional	99.97
PRK09186	256	flagellin modification protein A; Provisional	99.97
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.97
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.97
PRK08862	227	short chain dehydrogenase; Provisional	99.97
PRK08278	273	short chain dehydrogenase; Provisional	99.97
PRK05884	223	short chain dehydrogenase; Provisional	99.97
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK12742	237	oxidoreductase; Provisional	99.97
PLN00015	308	protochlorophyllide reductase	99.96
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK06057	255	short chain dehydrogenase; Provisional	99.96
PRK09134	258	short chain dehydrogenase; Provisional	99.96
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.96
PRK07774	250	short chain dehydrogenase; Provisional	99.96
PRK07109	334	short chain dehydrogenase; Provisional	99.96
PRK12827	249	short chain dehydrogenase; Provisional	99.96
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK07832	272	short chain dehydrogenase; Provisional	99.96
PRK07060	245	short chain dehydrogenase; Provisional	99.96
PRK05876	275	short chain dehydrogenase; Provisional	99.96
PRK07074	257	short chain dehydrogenase; Provisional	99.96
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.96
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.96
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.96
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.96
PRK05855	582	short chain dehydrogenase; Validated	99.96
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK05650	270	short chain dehydrogenase; Provisional	99.96
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.96
PRK07041	230	short chain dehydrogenase; Provisional	99.96
PRK07454	241	short chain dehydrogenase; Provisional	99.95
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
PRK08703	239	short chain dehydrogenase; Provisional	99.95
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
PRK07577	234	short chain dehydrogenase; Provisional	99.95
PRK06182	273	short chain dehydrogenase; Validated	99.95
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.95
PRK08324	681	short chain dehydrogenase; Validated	99.95
PRK08263	275	short chain dehydrogenase; Provisional	99.95
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.95
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.95
PRK07024	257	short chain dehydrogenase; Provisional	99.95
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.95
PRK07825	273	short chain dehydrogenase; Provisional	99.95
PRK06180	277	short chain dehydrogenase; Provisional	99.95
PRK12829	264	short chain dehydrogenase; Provisional	99.95
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.94
PRK10538	248	malonic semialdehyde reductase; Provisional	99.94
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.94
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.94
PRK05866	293	short chain dehydrogenase; Provisional	99.94
PRK12828	239	short chain dehydrogenase; Provisional	99.94
PRK06914	280	short chain dehydrogenase; Provisional	99.94
PRK05993	277	short chain dehydrogenase; Provisional	99.94
PLN02780	320	ketoreductase/ oxidoreductase	99.94
PRK06196	315	oxidoreductase; Provisional	99.94
PRK07775	274	short chain dehydrogenase; Provisional	99.94
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.94
PRK08267	260	short chain dehydrogenase; Provisional	99.93
PRK09135	249	pteridine reductase; Provisional	99.93
PRK06194	287	hypothetical protein; Provisional	99.93
PRK06924	251	short chain dehydrogenase; Provisional	99.93
PRK06181	263	short chain dehydrogenase; Provisional	99.93
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.93
PRK07904	253	short chain dehydrogenase; Provisional	99.93
PRK07578	199	short chain dehydrogenase; Provisional	99.93
PRK06179	270	short chain dehydrogenase; Provisional	99.93
PRK09072	263	short chain dehydrogenase; Provisional	99.93
PRK07806	248	short chain dehydrogenase; Provisional	99.93
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.93
PRK05854	313	short chain dehydrogenase; Provisional	99.93
PRK08251	248	short chain dehydrogenase; Provisional	99.92
PRK06482	276	short chain dehydrogenase; Provisional	99.92
COG1028	251	FabG Dehydrogenases with different specificities (	99.92
PRK06197	306	short chain dehydrogenase; Provisional	99.92
PRK05693	274	short chain dehydrogenase; Provisional	99.92
PRK07201	657	short chain dehydrogenase; Provisional	99.92
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
KOG1208	314	consensus Dehydrogenases with different specificit	99.92
PRK07102	243	short chain dehydrogenase; Provisional	99.92
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.92
PRK07326	237	short chain dehydrogenase; Provisional	99.91
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.91
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.91
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.91
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.91
PRK07023	243	short chain dehydrogenase; Provisional	99.91
PRK06101	240	short chain dehydrogenase; Provisional	99.9
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.9
PRK09291	257	short chain dehydrogenase; Provisional	99.88
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.88
PRK08017	256	oxidoreductase; Provisional	99.88
PRK08264	238	short chain dehydrogenase; Validated	99.86
PRK08177	225	short chain dehydrogenase; Provisional	99.86
PRK06953	222	short chain dehydrogenase; Provisional	99.86
PRK08219	227	short chain dehydrogenase; Provisional	99.85
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.8
PRK12367	245	short chain dehydrogenase; Provisional	99.79
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.71
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.7
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.65
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.6
PLN03209	576	translocon at the inner envelope of chloroplast su	99.59
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.59
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.55
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.51
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.46
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.41
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.37
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.33
PLN02653	340	GDP-mannose 4,6-dehydratase	99.31
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.28
PLN02650	351	dihydroflavonol-4-reductase	99.28
PRK06720	169	hypothetical protein; Provisional	99.27
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.26
PLN02572	442	UDP-sulfoquinovose synthase	99.26
PLN02214	342	cinnamoyl-CoA reductase	99.24
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.24
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.2
PLN02240	352	UDP-glucose 4-epimerase	99.19
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.18
PLN02583	297	cinnamoyl-CoA reductase	99.18
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.17
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.16
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.16
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.14
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.13
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.12
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.09
PLN00198	338	anthocyanidin reductase; Provisional	99.08
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.07
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.07
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.07
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.07
PLN02686	367	cinnamoyl-CoA reductase	99.01
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	98.97
PLN02427	386	UDP-apiose/xylose synthase	98.96
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	98.96
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	98.95
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	98.94
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	98.92
PLN02260	668	probable rhamnose biosynthetic enzyme	98.89
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	98.87
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	98.8
PLN02695	370	GDP-D-mannose-3',5'-epimerase	98.77
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	98.77
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	98.73
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	98.73
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	98.66
PLN02206	442	UDP-glucuronate decarboxylase	98.57
CHL00194	317	ycf39 Ycf39; Provisional	98.56
PLN02778	298	3,5-epimerase/4-reductase	98.54
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.53
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	98.53
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	98.5
PLN02166	436	dTDP-glucose 4,6-dehydratase	98.48
PRK07201	657	short chain dehydrogenase; Provisional	98.47
PLN02996	491	fatty acyl-CoA reductase	98.39
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	98.36
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	98.35
PLN02260	668	probable rhamnose biosynthetic enzyme	98.33
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	98.3
PRK05865	854	hypothetical protein; Provisional	98.22
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	98.15
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	98.15
COG3320	382	Putative dehydrogenase domain of multifunctional n	98.05
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.03
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	98.0
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	97.98
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	97.78
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	97.73
PRK08309	177	short chain dehydrogenase; Provisional	97.47
PLN00016	378	RNA-binding protein; Provisional	97.4
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	97.38
COG4982	866	3-oxoacyl-[acyl-carrier protein]	97.33
PLN02503	605	fatty acyl-CoA reductase 2	97.2
PRK12320	699	hypothetical protein; Provisional	96.91
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	96.55
KOG2774	366	consensus NAD dependent epimerase [General functio	96.29
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	96.2
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	96.07
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	96.02
KOG2733	423	consensus Uncharacterized membrane protein [Functi	95.95
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	95.29
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	95.05
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	94.99
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	94.6
PF12241	237	Enoyl_reductase: Trans-2-enoyl-CoA reductase catal	94.45
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	93.04
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	90.54
COG2910	211	Putative NADH-flavin reductase [General function p	90.46
PRK12548	289	shikimate 5-dehydrogenase; Provisional	88.72
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	88.28
PLN00106	323	malate dehydrogenase	86.81
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	83.61
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	81.29

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=3.2e-39  Score=244.09  Aligned_cols=212  Identities=25%  Similarity=0.321  Sum_probs=188.0

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +++.+..++++..|... +.-..+.||++++++++.++++..+.+|.++++|||||+.....+..+..++|+..+.+|+.
T Consensus        45 dl~~~~A~ata~~L~g~-~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~  123 (256)
T KOG1200|consen   45 DLDSAAAEATAGDLGGY-GDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLT  123 (256)
T ss_pred             ecchhhHHHHHhhcCCC-CccceeeeccCcHHHHHHHHHHHHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhch
Confidence            34455555555555443 24457899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      |.|+++|++.+.|...+.      .+++||||||..+..++.++..|+++|+++.+|+++.++|++ .++||||.|.||+
T Consensus       124 gvfl~tqaa~r~~~~~~~------~~~sIiNvsSIVGkiGN~GQtnYAAsK~GvIgftktaArEla-~knIrvN~VlPGF  196 (256)
T KOG1200|consen  124 GVFLVTQAAVRAMVMNQQ------QGLSIINVSSIVGKIGNFGQTNYAASKGGVIGFTKTAARELA-RKNIRVNVVLPGF  196 (256)
T ss_pred             hhHHHHHHHHHHHHHhcC------CCceEEeehhhhcccccccchhhhhhcCceeeeeHHHHHHHh-hcCceEeEecccc
Confidence            999999999999654321      045999999999999999999999999999999999999999 9999999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +.|||...  .++...+.+....|+++++++||+|..++||+|+.++|++|+.+.++||+.+
T Consensus       197 I~tpMT~~--mp~~v~~ki~~~iPmgr~G~~EevA~~V~fLAS~~ssYiTG~t~evtGGl~m  256 (256)
T KOG1200|consen  197 IATPMTEA--MPPKVLDKILGMIPMGRLGEAEEVANLVLFLASDASSYITGTTLEVTGGLAM  256 (256)
T ss_pred             ccChhhhh--cCHHHHHHHHccCCccccCCHHHHHHHHHHHhccccccccceeEEEeccccC
Confidence            99998654  3577888899999999999999999999999999999999999999999753

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=7.4e-38  Score=256.85  Aligned_cols=210  Identities=32%  Similarity=0.433  Sum_probs=187.5

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHh-CCccEEEeCCCCCCC----CCCCCCCHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNFL----VPAEDLSPNGFRTV   75 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-g~id~li~~ag~~~~----~~~~~~~~~~~~~~   75 (257)
                      ++|+.+++++..+++.+... ..++.+|++++++++++++++.+.+ |+||++|||+|....    .++.+.+.++|+..
T Consensus        26 ~~~~~~~~~~~~~~l~~~~~-~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~  104 (241)
T PF13561_consen   26 TDRNEEKLADALEELAKEYG-AEVIQCDLSDEESVEALFDEAVERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKT  104 (241)
T ss_dssp             EESSHHHHHHHHHHHHHHTT-SEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHH
T ss_pred             EeCChHHHHHHHHHHHHHcC-CceEeecCcchHHHHHHHHHHHhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHH
Confidence            36888887777777765422 3359999999999999999999999 999999999997665    78888999999999


Q ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCC-CCeEE
Q 025124           76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTD-YAIRV  154 (257)
Q Consensus        76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~-~gi~v  154 (257)
                      +++|+.+++.+++++.|+|.+          +|+||++||..+..+.+++..|+++|+|+++|+|+++.||+ + +||||
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~~----------~gsii~iss~~~~~~~~~~~~y~~sKaal~~l~r~lA~el~-~~~gIrV  173 (241)
T PF13561_consen  105 FDINVFSPFLLAQAALPLMKK----------GGSIINISSIAAQRPMPGYSAYSASKAALEGLTRSLAKELA-PKKGIRV  173 (241)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHH----------EEEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHHHHHHHHHG-GHGTEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHhh----------CCCcccccchhhcccCccchhhHHHHHHHHHHHHHHHHHhc-cccCeee
Confidence            999999999999999998887          58899999999999999999999999999999999999999 8 99999


Q ss_pred             EEEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          155 NGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       155 ~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      |+|.||++.|++.......++..+......|++++.+|+|+|++++||+++.++++||++|.+|||++
T Consensus       174 N~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~~v~fL~s~~a~~itG~~i~vDGG~s  241 (241)
T PF13561_consen  174 NAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPEEVANAVLFLASDAASYITGQVIPVDGGFS  241 (241)
T ss_dssp             EEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHHHHHHHHSGGGTTGTSEEEEESTTGG
T ss_pred             eeecccceeccchhccccccchhhhhhhhhccCCCcCHHHHHHHHHHHhCccccCccCCeEEECCCcC
Confidence            99999999998744333345677778888999999999999999999999999999999999999974

...

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.6e-36  Score=250.61  Aligned_cols=208  Identities=23%  Similarity=0.220  Sum_probs=177.5

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIE   77 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~   77 (257)
                      +|+ +++++..+++.  +.++.+++||++|+++++++++++.+++|++|++|||||+...    .++.+.+.++|+..++
T Consensus        40 ~r~-~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~  116 (252)
T PRK06079         40 YQN-DRMKKSLQKLV--DEEDLLVECDVASDESIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQD  116 (252)
T ss_pred             cCc-hHHHHHHHhhc--cCceeEEeCCCCCHHHHHHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhC
Confidence            466 34444444443  2467889999999999999999999999999999999997543    6788899999999999


Q ss_pred             HHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEE
Q 025124           78 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (257)
Q Consensus        78 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v  157 (257)
                      +|+.+++.++++++|+|.+          .|+||+++|.++..+.+++..|+++|+|+++|+++++.|+. ++||+||+|
T Consensus       117 in~~~~~~l~~~~~~~~~~----------~g~Iv~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gI~vn~i  185 (252)
T PRK06079        117 ISAYSLIAVAKYARPLLNP----------GASIVTLTYFGSERAIPNYNVMGIAKAALESSVRYLARDLG-KKGIRVNAI  185 (252)
T ss_pred             cccHHHHHHHHHHHHhccc----------CceEEEEeccCccccCCcchhhHHHHHHHHHHHHHHHHHhh-hcCcEEEEE
Confidence            9999999999999999853          58899999999988888999999999999999999999999 899999999


Q ss_pred             ecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          158 APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       158 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +||+++|++.......++..+.+....|.+++.+|+|+++++.||+++.+++++|+++.+|||+.+
T Consensus       186 ~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg~~~  251 (252)
T PRK06079        186 SAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIEEVGNTAAFLLSDLSTGVTGDIIYVDKGVHL  251 (252)
T ss_pred             ecCcccccccccCCChHHHHHHHHhcCcccCCCCHHHHHHHHHHHhCcccccccccEEEeCCceec
Confidence            999999987533222233344455566788999999999999999999999999999999999654

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-36  Score=252.15  Aligned_cols=213  Identities=23%  Similarity=0.305  Sum_probs=187.2

Q ss_pred             CCCcHHHHHHHHHHHHhc-CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      ++|+.++++++.+++.+. +.++.++.+|++|+++++.+++++. ++|++|++|||+|.....++.+.+.++|++++++|
T Consensus        38 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n  116 (263)
T PRK08339         38 LSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-NIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLL  116 (263)
T ss_pred             EeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-hhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHH
Confidence            368889999988888765 5678999999999999999999986 58999999999998777788899999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.+++.++++++|+|++++        .|+||++||..+..+.+++..|+++|+|+.+|+++++.|+. ++|||||+|+|
T Consensus       117 ~~~~~~~~~~~l~~m~~~~--------~g~Ii~isS~~~~~~~~~~~~y~asKaal~~l~~~la~el~-~~gIrVn~v~P  187 (263)
T PRK08339        117 LYPAVYLTRALVPAMERKG--------FGRIIYSTSVAIKEPIPNIALSNVVRISMAGLVRTLAKELG-PKGITVNGIMP  187 (263)
T ss_pred             hHHHHHHHHHHHHHHHHcC--------CCEEEEEcCccccCCCCcchhhHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEe
Confidence            9999999999999998876        68999999999998889999999999999999999999999 99999999999


Q ss_pred             CcccCCCCCCCC---------ChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          160 GPIKDTAGVSKL---------APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       160 g~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      |+++|++.....         ..++.........|++++.+|+|++.+++||+++.+++++|+.+.+|||...
T Consensus       188 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~s~~~~~itG~~~~vdgG~~~  260 (263)
T PRK08339        188 GIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVAFLASDLGSYINGAMIPVDGGRLN  260 (263)
T ss_pred             CcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHHHHHHHHHHhcchhcCccCceEEECCCccc
Confidence            999998643210         1122333445567888999999999999999999999999999999999754

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.7e-36  Score=253.19  Aligned_cols=197  Identities=26%  Similarity=0.221  Sum_probs=168.8

Q ss_pred             CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC----CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 025124           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF----LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL   94 (257)
Q Consensus        19 ~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~   94 (257)
                      +.. .++++|++|.++++.+++++.+++|++|++|||||+..    ..++.+.+.++|++++++|+.++++++++++|.|
T Consensus        55 ~~~-~~~~~Dv~d~~~v~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m  133 (274)
T PRK08415         55 GSD-YVYELDVSKPEHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLL  133 (274)
T ss_pred             CCc-eEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHh
Confidence            444 67899999999999999999999999999999999754    2577889999999999999999999999999999


Q ss_pred             HhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChH
Q 025124           95 KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE  174 (257)
Q Consensus        95 ~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~  174 (257)
                      .+          +|+||++||.++..+.+.+..|+++|+|+.+|+++++.|+. ++||+||+|+||+++|++........
T Consensus       134 ~~----------~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~v~PG~v~T~~~~~~~~~~  202 (274)
T PRK08415        134 ND----------GASVLTLSYLGGVKYVPHYNVMGVAKAALESSVRYLAVDLG-KKGIRVNAISAGPIKTLAASGIGDFR  202 (274)
T ss_pred             cc----------CCcEEEEecCCCccCCCcchhhhhHHHHHHHHHHHHHHHhh-hcCeEEEEEecCccccHHHhccchhh
Confidence            64          57899999999988888899999999999999999999999 89999999999999997532211111


Q ss_pred             HHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCC
Q 025124          175 EIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPR  227 (257)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~  227 (257)
                      ..........|++++.+|+|++++++||+++.+.+++|+++.+|||..+.+.+
T Consensus       203 ~~~~~~~~~~pl~r~~~pedva~~v~fL~s~~~~~itG~~i~vdGG~~~~~~~  255 (274)
T PRK08415        203 MILKWNEINAPLKKNVSIEEVGNSGMYLLSDLSSGVTGEIHYVDAGYNIMGMG  255 (274)
T ss_pred             HHhhhhhhhCchhccCCHHHHHHHHHHHhhhhhhcccccEEEEcCcccccCCC
Confidence            11112223457888999999999999999998999999999999998766544

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.8e-36  Score=250.74  Aligned_cols=211  Identities=24%  Similarity=0.250  Sum_probs=174.4

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIE   77 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~   77 (257)
                      +|+.+..+++.+...+.+. ..++++|++|.++++.+++++.+++|++|++|||||+...    .++.+.+.++|+++++
T Consensus        40 ~r~~~~~~~~~~~~~~~g~-~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~  118 (271)
T PRK06505         40 YQGEALGKRVKPLAESLGS-DFVLPCDVEDIASVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMV  118 (271)
T ss_pred             cCchHHHHHHHHHHHhcCC-ceEEeCCCCCHHHHHHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHh
Confidence            4654433333222233333 4578999999999999999999999999999999997543    4677899999999999


Q ss_pred             HHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEE
Q 025124           78 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (257)
Q Consensus        78 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v  157 (257)
                      +|+.+++.++++++|+|.+          +|+||++||..+..+.+++..|+++|+|+.+|+++|+.|+. ++|||||+|
T Consensus       119 vn~~~~~~l~~~~~~~m~~----------~G~Iv~isS~~~~~~~~~~~~Y~asKaAl~~l~r~la~el~-~~gIrVn~v  187 (271)
T PRK06505        119 ISCFSFTEIAKRAAKLMPD----------GGSMLTLTYGGSTRVMPNYNVMGVAKAALEASVRYLAADYG-PQGIRVNAI  187 (271)
T ss_pred             hhhhhHHHHHHHHHHhhcc----------CceEEEEcCCCccccCCccchhhhhHHHHHHHHHHHHHHHh-hcCeEEEEE
Confidence            9999999999999999973          58899999999988888999999999999999999999999 999999999


Q ss_pred             ecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          158 APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       158 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      +||+++|++..................|++++.+|+|+++.++||+++.+.+++|+.+.+|||..+.
T Consensus       188 ~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peeva~~~~fL~s~~~~~itG~~i~vdgG~~~~  254 (271)
T PRK06505        188 SAGPVRTLAGAGIGDARAIFSYQQRNSPLRRTVTIDEVGGSALYLLSDLSSGVTGEIHFVDSGYNIV  254 (271)
T ss_pred             ecCCccccccccCcchHHHHHHHhhcCCccccCCHHHHHHHHHHHhCccccccCceEEeecCCcccC
Confidence            9999999864321111122223334567888999999999999999999999999999999997654

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.7e-36  Score=248.32  Aligned_cols=212  Identities=23%  Similarity=0.230  Sum_probs=176.6

Q ss_pred             CCcHHHHHHHHHHHHhc-CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC----CCCCCCCCHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF----LVPAEDLSPNGFRTVI   76 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~----~~~~~~~~~~~~~~~~   76 (257)
                      +|+ +++++..+++.+. +. ..++++|++|+++++++++++.+++|++|++|||+|...    ..++.+.+.++|++.+
T Consensus        41 ~r~-~~~~~~~~~l~~~~g~-~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~  118 (260)
T PRK06603         41 YQS-EVLEKRVKPLAEEIGC-NFVSELDVTNPKSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSL  118 (260)
T ss_pred             eCc-hHHHHHHHHHHHhcCC-ceEEEccCCCHHHHHHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHH
Confidence            455 3344445555443 33 356799999999999999999999999999999999754    2467889999999999


Q ss_pred             HHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEE
Q 025124           77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (257)
Q Consensus        77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~  156 (257)
                      ++|+.+++.+++++.|.|.+          +|+||++||..+..+.+++..|+++|+|+.+|+++++.|+. ++||+||+
T Consensus       119 ~vn~~~~~~~~~~~~~~m~~----------~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~  187 (260)
T PRK06603        119 HISCYSLLELSRSAEALMHD----------GGSIVTLTYYGAEKVIPNYNVMGVAKAALEASVKYLANDMG-ENNIRVNA  187 (260)
T ss_pred             HHHHHHHHHHHHHHHhhhcc----------CceEEEEecCccccCCCcccchhhHHHHHHHHHHHHHHHhh-hcCeEEEE
Confidence            99999999999999999953          58899999999888888899999999999999999999999 89999999


Q ss_pred             EecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCC
Q 025124          157 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNP  226 (257)
Q Consensus       157 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~  226 (257)
                      |+||+++|++........+..+......|++++.+|+|++++++||+++.+.+++|+.+.+|||+.+...
T Consensus       188 v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~~~~~~  257 (260)
T PRK06603        188 ISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQEDVGGAAVYLFSELSKGVTGEIHYVDCGYNIMGS  257 (260)
T ss_pred             EecCcCcchhhhcCCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCcccccCcceEEEeCCcccccCc
Confidence            9999999986432111122233344556888999999999999999999999999999999999877543

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=4.7e-36  Score=248.59  Aligned_cols=207  Identities=26%  Similarity=0.298  Sum_probs=177.8

Q ss_pred             HHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC----CCCCCCCCHHHHHHHHHHHhHH
Q 025124            7 VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF----LVPAEDLSPNGFRTVIEIDSVG   82 (257)
Q Consensus         7 ~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~   82 (257)
                      +.++..+++.+.+.++.++++|++|+++++++++++.+++|++|++|||||+..    ..++.+.+.++|++++++|+.+
T Consensus        46 ~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~  125 (258)
T PRK07370         46 RFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYS  125 (258)
T ss_pred             hHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHH
Confidence            455556666655556788999999999999999999999999999999999753    2578889999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcc
Q 025124           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (257)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v  162 (257)
                      ++.++++++|.|.+          .|+||++||..+..+.+++..|+++|+|+.+|+++|+.|+. ++||+||+|+||++
T Consensus       126 ~~~l~~~~~~~m~~----------~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gI~Vn~i~PG~v  194 (258)
T PRK07370        126 LAPLCKAAKPLMSE----------GGSIVTLTYLGGVRAIPNYNVMGVAKAALEASVRYLAAELG-PKNIRVNAISAGPI  194 (258)
T ss_pred             HHHHHHHHHHHHhh----------CCeEEEEeccccccCCcccchhhHHHHHHHHHHHHHHHHhC-cCCeEEEEEecCcc
Confidence            99999999999964          58899999999988889999999999999999999999999 89999999999999


Q ss_pred             cCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          163 KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       163 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      +|++........+..+......|++++.+|+|++..+.||+++.+.+++|+.+.+|||..+.
T Consensus       195 ~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~fl~s~~~~~~tG~~i~vdgg~~~~  256 (258)
T PRK07370        195 RTLASSAVGGILDMIHHVEEKAPLRRTVTQTEVGNTAAFLLSDLASGITGQTIYVDAGYCIM  256 (258)
T ss_pred             cCchhhccccchhhhhhhhhcCCcCcCCCHHHHHHHHHHHhChhhccccCcEEEECCccccc
Confidence            99864321111222333445567889999999999999999999999999999999997654

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=1e-35  Score=245.55  Aligned_cols=206  Identities=30%  Similarity=0.409  Sum_probs=180.2

Q ss_pred             HHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHH
Q 025124            9 RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH   88 (257)
Q Consensus         9 ~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~   88 (257)
                      +++.+.+.+.+.++.++.+|++++++++++++++.+.+|++|++|||||+....++.+.+.++|++++++|+.+++.+++
T Consensus        44 ~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~  123 (251)
T PRK12481         44 PETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQ  123 (251)
T ss_pred             HHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHH
Confidence            44556666667789999999999999999999999999999999999998777788899999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCC
Q 025124           89 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  168 (257)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~  168 (257)
                      +++++|.+++.       .|+||++||..+..+.+....|+++|+|+++|+++++.|+. ++||+||+|+||+++|++..
T Consensus       124 ~~~~~~~~~~~-------~g~ii~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~-~~girvn~v~PG~v~t~~~~  195 (251)
T PRK12481        124 AVAKQFVKQGN-------GGKIINIASMLSFQGGIRVPSYTASKSAVMGLTRALATELS-QYNINVNAIAPGYMATDNTA  195 (251)
T ss_pred             HHHHHHHHcCC-------CCEEEEeCChhhcCCCCCCcchHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCCCccCchh
Confidence            99999987531       48999999999988888889999999999999999999999 89999999999999998754


Q ss_pred             CCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          169 SKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      .........+......|.+++.+|+|+++++.||+++.+.+++|+.+.+|||+.
T Consensus       196 ~~~~~~~~~~~~~~~~p~~~~~~peeva~~~~~L~s~~~~~~~G~~i~vdgg~~  249 (251)
T PRK12481        196 ALRADTARNEAILERIPASRWGTPDDLAGPAIFLSSSASDYVTGYTLAVDGGWL  249 (251)
T ss_pred             hcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCceEEECCCEe
Confidence            322222223334456678899999999999999999999999999999999964

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1e-35  Score=246.98  Aligned_cols=207  Identities=21%  Similarity=0.184  Sum_probs=173.7

Q ss_pred             HHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCC----C-CCCCCHHHHHHHHHHHhH
Q 025124            7 VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV----P-AEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         7 ~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~----~-~~~~~~~~~~~~~~~n~~   81 (257)
                      +.++..+++.+..+....++||++|+++++++++++.+++|+||++|||||+....    + +.+.+.++|+..+++|+.
T Consensus        43 ~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~  122 (261)
T PRK08690         43 KLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAY  122 (261)
T ss_pred             HHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchH
Confidence            34444455544433456799999999999999999999999999999999976432    2 356788999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.++++++|.|+++         +|+||++||.++..+.+++..|+++|+|+.+|+++++.|+. ++|||||+|+||+
T Consensus       123 ~~~~l~~~~~p~m~~~---------~g~Iv~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~-~~gIrVn~i~PG~  192 (261)
T PRK08690        123 SLPALAKAARPMMRGR---------NSAIVALSYLGAVRAIPNYNVMGMAKASLEAGIRFTAACLG-KEGIRCNGISAGP  192 (261)
T ss_pred             HHHHHHHHHHHHhhhc---------CcEEEEEcccccccCCCCcccchhHHHHHHHHHHHHHHHhh-hcCeEEEEEecCc
Confidence            9999999999998653         58899999999988889999999999999999999999999 9999999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ++|++........+.........|++++.+|+|+|+++.||+++.+.+++|+.+.+|||..+
T Consensus       193 v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~l~s~~~~~~tG~~i~vdgG~~~  254 (261)
T PRK08690        193 IKTLAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTAAFLLSDLSSGITGEITYVDGGYSI  254 (261)
T ss_pred             ccchhhhcCCchHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCcccCCcceeEEEEcCCccc
Confidence            99986432221223333344556888999999999999999999999999999999999765

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-35  Score=244.05  Aligned_cols=214  Identities=26%  Similarity=0.404  Sum_probs=188.6

Q ss_pred             CCCcHHHHHHHHHHHHh--cCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHS--LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI   78 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~--~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~   78 (257)
                      ++|+.++++++.+++.+  .+.++.++.+|++|+++++.+++++.++++++|++|||||.....++.+.+.++|+.++++
T Consensus        37 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~  116 (260)
T PRK07063         37 ADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAV  116 (260)
T ss_pred             EeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHh
Confidence            36888899999998877  4667889999999999999999999999999999999999876667778899999999999


Q ss_pred             HhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      |+.+++.++++++|.|.++.        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++|||||+|+
T Consensus       117 n~~~~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~el~-~~gIrvn~v~  187 (260)
T PRK07063        117 DLDGAWNGCRAVLPGMVERG--------RGSIVNIASTHAFKIIPGCFPYPVAKHGLLGLTRALGIEYA-ARNVRVNAIA  187 (260)
T ss_pred             hhHHHHHHHHHHHHHHHhhC--------CeEEEEECChhhccCCCCchHHHHHHHHHHHHHHHHHHHhC-ccCeEEEEEe
Confidence            99999999999999998765        68999999999999988999999999999999999999999 8999999999


Q ss_pred             cCcccCCCCCCCC----ChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          159 PGPIKDTAGVSKL----APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       159 Pg~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ||+++|++.....    .............|++++.+|+|++..++||+++.+.+++|+++.+|||..+
T Consensus       188 PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~~~~fl~s~~~~~itG~~i~vdgg~~~  256 (260)
T PRK07063        188 PGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAVFLASDEAPFINATCITIDGGRSV  256 (260)
T ss_pred             eCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccccCCcEEEECCCeee
Confidence            9999998753221    1122233344566888999999999999999999999999999999999754

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.1e-35  Score=244.55  Aligned_cols=207  Identities=21%  Similarity=0.240  Sum_probs=175.2

Q ss_pred             cHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC----CCCCCCCCHHHHHHHHHHH
Q 025124            4 RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF----LVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         4 ~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n   79 (257)
                      +.++++++.+++.  +.++.++++|++|+++++.+++++.+++|++|++|||||+..    ..++.+.+.++|+..+++|
T Consensus        45 ~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n  122 (257)
T PRK08594         45 LEKEVRELADTLE--GQESLLLPCDVTSDEEITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNIS  122 (257)
T ss_pred             chHHHHHHHHHcC--CCceEEEecCCCCHHHHHHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhh
Confidence            3455666655543  467889999999999999999999999999999999999754    2567788999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.+++.++++++|+|.+          +|+||++||..+..+.+++..|+++|+|+++|+++++.|+. ++|||||+|+|
T Consensus       123 ~~~~~~~~~~~~~~~~~----------~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrvn~v~P  191 (257)
T PRK08594        123 AYSLTAVAREAKKLMTE----------GGSIVTLTYLGGERVVQNYNVMGVAKASLEASVKYLANDLG-KDGIRVNAISA  191 (257)
T ss_pred             HHHHHHHHHHHHHhccc----------CceEEEEcccCCccCCCCCchhHHHHHHHHHHHHHHHHHhh-hcCCEEeeeec
Confidence            99999999999999954          58899999999998888899999999999999999999999 89999999999


Q ss_pred             CcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       160 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      |+++|++........+.........|.+++.+|+|+++.++||+++.+++++|+.+.+|||+.+
T Consensus       192 G~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~l~s~~~~~~tG~~~~~dgg~~~  255 (257)
T PRK08594        192 GPIRTLSAKGVGGFNSILKEIEERAPLRRTTTQEEVGDTAAFLFSDLSRGVTGENIHVDSGYHI  255 (257)
T ss_pred             CcccCHhHhhhccccHHHHHHhhcCCccccCCHHHHHHHHHHHcCcccccccceEEEECCchhc
Confidence            9999985322111112222334455778899999999999999999999999999999999754

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6e-35  Score=241.23  Aligned_cols=211  Identities=26%  Similarity=0.360  Sum_probs=184.3

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|+.++++++.+++.+.+.++..+.+|++|+++++++++++.+.++++|++|||+|.....++.+.+.++|++++++|+
T Consensus        39 ~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~  118 (253)
T PRK05867         39 AARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNV  118 (253)
T ss_pred             EcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcc
Confidence            36888999999999988777889999999999999999999999999999999999987777888899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccccc-c-cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-W-YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~-~-~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      .+++.+++++++.|.+++.       .|+|+++||..+..+. + ....|+++|+|+++|+++++.|+. ++||+||+|+
T Consensus       119 ~~~~~~~~~~~~~~~~~~~-------~g~iv~~sS~~~~~~~~~~~~~~Y~asKaal~~~~~~la~e~~-~~gI~vn~i~  190 (253)
T PRK05867        119 TGVFLTAQAAAKAMVKQGQ-------GGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVELA-PHKIRVNSVS  190 (253)
T ss_pred             hhHHHHHHHHHHHHHhcCC-------CcEEEEECcHHhcCCCCCCCccchHHHHHHHHHHHHHHHHHHh-HhCeEEEEee
Confidence            9999999999999987541       4789999998776433 3 457899999999999999999999 8999999999


Q ss_pred             cCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       159 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      ||+++|++....   .+.........+.+++.+|+|+|++++||+++.+++++|+.+.+|||+.
T Consensus       191 PG~v~t~~~~~~---~~~~~~~~~~~~~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgG~~  251 (253)
T PRK05867        191 PGYILTELVEPY---TEYQPLWEPKIPLGRLGRPEELAGLYLYLASEASSYMTGSDIVIDGGYT  251 (253)
T ss_pred             cCCCCCcccccc---hHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCcCCCeEEECCCcc
Confidence            999999875322   1222334455678899999999999999999999999999999999965

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=3.5e-35  Score=232.01  Aligned_cols=196  Identities=23%  Similarity=0.230  Sum_probs=173.8

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|+.++|+++++++.+  .++..+..||+|.++++.+++.+.++|++||+||||||.....++.+.+.++|+.++++|+
T Consensus        36 ~aRR~drL~~la~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni  113 (246)
T COG4221          36 AARREERLEALADEIGA--GAALALALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNV  113 (246)
T ss_pred             EeccHHHHHHHHHhhcc--CceEEEeeccCCHHHHHHHHHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHH
Confidence            47999999999999987  6799999999999999999999999999999999999988889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .|.++.+++.+|.|.+++        .|.|||+||.++..++++...|+++|+++.+|.+.|++|+. +++|||..|.||
T Consensus       114 ~G~l~~~~avLP~m~~r~--------~G~IiN~~SiAG~~~y~~~~vY~ATK~aV~~fs~~LR~e~~-g~~IRVt~I~PG  184 (246)
T COG4221         114 KGLLNGTRAVLPGMVERK--------SGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQELA-GTGIRVTVISPG  184 (246)
T ss_pred             HHHHHHHHHhhhHHHhcC--------CceEEEeccccccccCCCCccchhhHHHHHHHHHHHHHHhc-CCCeeEEEecCc
Confidence            999999999999999998        79999999999999999999999999999999999999999 899999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCC
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK  208 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  208 (257)
                      .+.|+.+....... ..+............+|+|+|+++.|.++.+.+
T Consensus       185 ~v~~~~~s~v~~~g-~~~~~~~~y~~~~~l~p~dIA~~V~~~~~~P~~  231 (246)
T COG4221         185 LVETTEFSTVRFEG-DDERADKVYKGGTALTPEDIAEAVLFAATQPQH  231 (246)
T ss_pred             eecceecccccCCc-hhhhHHHHhccCCCCCHHHHHHHHHHHHhCCCc
Confidence            99877554443322 122222322334568999999999999986544

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.6e-35  Score=242.13  Aligned_cols=193  Identities=27%  Similarity=0.332  Sum_probs=168.5

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKK   96 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~   96 (257)
                      .+.+++||++|.++++++++++.+++|++|++|||||+...    .++.+.+.++|++++++|+.+++.++++++|+|.+
T Consensus        61 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~  140 (258)
T PRK07533         61 APIFLPLDVREPGQLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN  140 (258)
T ss_pred             cceEEecCcCCHHHHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc
Confidence            35689999999999999999999999999999999997542    56788999999999999999999999999999953


Q ss_pred             cCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHH
Q 025124           97 GGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI  176 (257)
Q Consensus        97 ~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~  176 (257)
                                .|+||++||..+..+.+++..|+++|+|+.+|+++++.|+. ++||+||+|+||+++|++..........
T Consensus       141 ----------~g~Ii~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gI~Vn~v~PG~v~T~~~~~~~~~~~~  209 (258)
T PRK07533        141 ----------GGSLLTMSYYGAEKVVENYNLMGPVKAALESSVRYLAAELG-PKGIRVHAISPGPLKTRAASGIDDFDAL  209 (258)
T ss_pred             ----------CCEEEEEeccccccCCccchhhHHHHHHHHHHHHHHHHHhh-hcCcEEEEEecCCcCChhhhccCCcHHH
Confidence                      58899999998888888899999999999999999999999 8999999999999999875322111223


Q ss_pred             HHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          177 RSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       177 ~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      .+......|.+++.+|+|++..++||+++.+.+++|+.+.+|||..+.
T Consensus       210 ~~~~~~~~p~~r~~~p~dva~~~~~L~s~~~~~itG~~i~vdgg~~~~  257 (258)
T PRK07533        210 LEDAAERAPLRRLVDIDDVGAVAAFLASDAARRLTGNTLYIDGGYHIV  257 (258)
T ss_pred             HHHHHhcCCcCCCCCHHHHHHHHHHHhChhhccccCcEEeeCCccccc
Confidence            334445667888999999999999999998999999999999997653

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-34  Score=239.95  Aligned_cols=215  Identities=30%  Similarity=0.408  Sum_probs=187.8

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n   79 (257)
                      ++|++++++++.+++.+.+.++.++.+|++++++++.+++++.++++++|++|||||... ..++.+.+.++|+.++++|
T Consensus        36 ~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N  115 (254)
T PRK07478         36 GARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATN  115 (254)
T ss_pred             EeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHH
Confidence            368889999999999887888999999999999999999999999999999999999753 4677888999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccc-cccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~-~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      +.+++.++++++|.|++++        .++||++||..+. .+.+++..|+++|+|+++|+++++.|+. ++||+|++|+
T Consensus       116 ~~~~~~~~~~~~~~l~~~~--------~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~  186 (254)
T PRK07478        116 LTSAFLGAKHQIPAMLARG--------GGSLIFTSTFVGHTAGFPGMAAYAASKAGLIGLTQVLAAEYG-AQGIRVNALL  186 (254)
T ss_pred             hHHHHHHHHHHHHHHHhcC--------CceEEEEechHhhccCCCCcchhHHHHHHHHHHHHHHHHHHh-hcCEEEEEEe
Confidence            9999999999999998876        6899999998876 5678889999999999999999999998 8899999999


Q ss_pred             cCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       159 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      ||+++|++..................+.+++.+|+|+++.++||+++.+.+++|+.+.+|||..+.
T Consensus       187 PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg~~~~  252 (254)
T PRK07478        187 PGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFLASDAASFVTGTALLVDGGVSIT  252 (254)
T ss_pred             eCcccCcccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCeEEeCCchhcc
Confidence            999999975433222233333344456778899999999999999988899999999999997654

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.8e-35  Score=243.40  Aligned_cols=192  Identities=23%  Similarity=0.200  Sum_probs=164.4

Q ss_pred             eEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCC----C-CCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Q 025124           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV----P-AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKK   96 (257)
Q Consensus        22 ~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~----~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~   96 (257)
                      ...+++|++|+++++.+++++.+++|++|++|||||+....    + +.+.+.++|+..+++|+.+++.++++++|+|.+
T Consensus        58 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~  137 (260)
T PRK06997         58 DLVFPCDVASDEQIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD  137 (260)
T ss_pred             cceeeccCCCHHHHHHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC
Confidence            45789999999999999999999999999999999975432    2 456789999999999999999999999999942


Q ss_pred             cCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHH
Q 025124           97 GGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI  176 (257)
Q Consensus        97 ~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~  176 (257)
                                .|+||++||..+..+.+++..|+++|+|+.+|+++++.|+. ++|||||+|+||+++|++........+.
T Consensus       138 ----------~g~Ii~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~i~PG~v~T~~~~~~~~~~~~  206 (260)
T PRK06997        138 ----------DASLLTLSYLGAERVVPNYNTMGLAKASLEASVRYLAVSLG-PKGIRANGISAGPIKTLAASGIKDFGKI  206 (260)
T ss_pred             ----------CceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeeCccccchhccccchhhH
Confidence                      58899999999988888889999999999999999999999 8999999999999999754321111222


Q ss_pred             HHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          177 RSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       177 ~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      ........|+++..+|+|+++.+.||+++++.+++|+.+.+|||.+..
T Consensus       207 ~~~~~~~~p~~r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg~~~~  254 (260)
T PRK06997        207 LDFVESNAPLRRNVTIEEVGNVAAFLLSDLASGVTGEITHVDSGFNAV  254 (260)
T ss_pred             HHHHHhcCcccccCCHHHHHHHHHHHhCccccCcceeEEEEcCChhhc
Confidence            233344567888999999999999999999999999999999997654

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.1e-35  Score=242.20  Aligned_cols=210  Identities=20%  Similarity=0.188  Sum_probs=174.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCC-----CCCCCHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP-----AEDLSPNGFRTVI   76 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~-----~~~~~~~~~~~~~   76 (257)
                      +|+ +++++..+++......+..+.||++|+++++.+++++.+.+|++|++|||||+.....     +.+.+.++|+.++
T Consensus        39 ~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~  117 (262)
T PRK07984         39 YQN-DKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAH  117 (262)
T ss_pred             ecc-hhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHh
Confidence            455 3455566666655456778999999999999999999999999999999999754322     5677899999999


Q ss_pred             HHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEE
Q 025124           77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (257)
Q Consensus        77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~  156 (257)
                      ++|+.+++.+++++.|.+.+          +|+||++||.++..+.+++..|+++|+|+++|+++++.|+. ++|||||+
T Consensus       118 ~~n~~~~~~~~~~~~~~~~~----------~g~Iv~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~  186 (262)
T PRK07984        118 DISSYSFVAMAKACRSMLNP----------GSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMG-PEGVRVNA  186 (262)
T ss_pred             hhhhHHHHHHHHHHHHHhcC----------CcEEEEEecCCCCCCCCCcchhHHHHHHHHHHHHHHHHHhc-ccCcEEee
Confidence            99999999999999886632          58899999999888888899999999999999999999999 89999999


Q ss_pred             EecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          157 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       157 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      |+||+++|++...........+......|.+++.+|+|++.+++||+++.+.+++|+.+.+|||+.+
T Consensus       187 i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgg~~~  253 (262)
T PRK07984        187 ISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSI  253 (262)
T ss_pred             eecCcccchHHhcCCchHHHHHHHHHcCCCcCCCCHHHHHHHHHHHcCcccccccCcEEEECCCccc
Confidence            9999999975322111122233334456788999999999999999999899999999999999654

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8.9e-35  Score=242.61  Aligned_cols=193  Identities=25%  Similarity=0.232  Sum_probs=166.0

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC----CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF----LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKK   96 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~   96 (257)
                      ....+++|++|+++++++++++.+++|++|++|||||+..    ..++.+.+.++|+..+++|+.+++.++++++|.|.+
T Consensus        61 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~  140 (272)
T PRK08159         61 AFVAGHCDVTDEASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD  140 (272)
T ss_pred             CceEEecCCCCHHHHHHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence            3567999999999999999999999999999999999754    256788899999999999999999999999999853


Q ss_pred             cCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHH
Q 025124           97 GGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI  176 (257)
Q Consensus        97 ~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~  176 (257)
                                +|+||++||.++..+.+++..|+++|+|+.+|+++++.|+. ++||+||+|+||+++|++..........
T Consensus       141 ----------~g~Iv~iss~~~~~~~p~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~v~PG~v~T~~~~~~~~~~~~  209 (272)
T PRK08159        141 ----------GGSILTLTYYGAEKVMPHYNVMGVAKAALEASVKYLAVDLG-PKNIRVNAISAGPIKTLAASGIGDFRYI  209 (272)
T ss_pred             ----------CceEEEEeccccccCCCcchhhhhHHHHHHHHHHHHHHHhc-ccCeEEEEeecCCcCCHHHhcCCcchHH
Confidence                      58899999998888889999999999999999999999999 8999999999999999764221111111


Q ss_pred             HHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          177 RSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       177 ~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      ........|++++.+|+|+|+.++||+++.+.+++|+.+.+|||+.+.
T Consensus       210 ~~~~~~~~p~~r~~~peevA~~~~~L~s~~~~~itG~~i~vdgG~~~~  257 (272)
T PRK08159        210 LKWNEYNAPLRRTVTIEEVGDSALYLLSDLSRGVTGEVHHVDSGYHVV  257 (272)
T ss_pred             HHHHHhCCcccccCCHHHHHHHHHHHhCccccCccceEEEECCCceee
Confidence            122223467788999999999999999999999999999999997654

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-34  Score=237.52  Aligned_cols=214  Identities=27%  Similarity=0.375  Sum_probs=191.2

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|++++++++.+++...+.++.++.+|++|+++++.+++++.++++++|++|||+|.....++.+.+.++|++.+++|+
T Consensus        39 ~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~  118 (254)
T PRK08085         39 NDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQ  118 (254)
T ss_pred             EcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHh
Confidence            36888889998888887777888999999999999999999999999999999999987777888899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .+++.+++++++.|.+++        .++||++||..+..+.++...|+++|+++++|+++++.|+. ++||++|+|+||
T Consensus       119 ~~~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~pG  189 (254)
T PRK08085        119 TAVFLVSQAVARYMVKRQ--------AGKIINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELA-RHNIQVNGIAPG  189 (254)
T ss_pred             HHHHHHHHHHHHHHHHcC--------CcEEEEEccchhccCCCCCcchHHHHHHHHHHHHHHHHHHH-hhCeEEEEEEeC
Confidence            999999999999998765        68999999998888888899999999999999999999999 899999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +++|++.......++.........|++++++|+|++..+.+|+++.+++++|+.+.+|||+..
T Consensus       190 ~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgg~~~  252 (254)
T PRK08085        190 YFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDFVNGHLLFVDGGMLV  252 (254)
T ss_pred             CCCCcchhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCeee
Confidence            999997654333333444455667888999999999999999999999999999999999754

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=2e-34  Score=238.86  Aligned_cols=215  Identities=15%  Similarity=0.208  Sum_probs=184.4

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC--CCCCCCCCHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEI   78 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~   78 (257)
                      ++|++++++++.+++.+.+ ++.++.+|++|.++++++++++.++++++|++|||||...  ..++.+.+.++|...+++
T Consensus        30 ~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~  108 (259)
T PRK08340         30 SSRNEENLEKALKELKEYG-EVYAVKADLSDKDDLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALL  108 (259)
T ss_pred             EeCCHHHHHHHHHHHHhcC-CceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhh
Confidence            3688889999988887654 7889999999999999999999999999999999999753  345778899999999999


Q ss_pred             HhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      |+.+++.+++.+++.|.+...       .|+||++||..+..+.++...|+++|+|+.+|+++++.|+. ++||+|++|+
T Consensus       109 n~~~~~~~~~~~l~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~-~~gI~v~~v~  180 (259)
T PRK08340        109 HLVAPGYLTTLLIQAWLEKKM-------KGVLVYLSSVSVKEPMPPLVLADVTRAGLVQLAKGVSRTYG-GKGIRAYTVL  180 (259)
T ss_pred             cchHHHHHHHHHHHHHHhcCC-------CCEEEEEeCcccCCCCCCchHHHHHHHHHHHHHHHHHHHhC-CCCEEEEEec
Confidence            999999999999999874321       68999999999988888899999999999999999999999 8999999999


Q ss_pred             cCcccCCCCCCCC---------ChHH-HHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          159 PGPIKDTAGVSKL---------APEE-IRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       159 Pg~v~t~~~~~~~---------~~~~-~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      ||+++|++.....         ..++ ..+......|++++.+|+|+|++++||+++.+++++|+++.+|||+...
T Consensus       181 pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~fL~s~~~~~itG~~i~vdgg~~~~  256 (259)
T PRK08340        181 LGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAFLLSENAEYMLGSTIVFDGAMTRG  256 (259)
T ss_pred             cCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHHHHHHHHHcCcccccccCceEeecCCcCCC
Confidence            9999999753211         1111 1233445567889999999999999999999999999999999997654

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-34  Score=236.75  Aligned_cols=212  Identities=28%  Similarity=0.411  Sum_probs=184.6

Q ss_pred             CCcH-HHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            2 GRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~-~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      +|+. ..++++.+++...+.++.++.+|++|+++++++++++.++++++|++|||+|.....++.+.+.++|++++++|+
T Consensus        39 ~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~  118 (254)
T PRK06114         39 DLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINL  118 (254)
T ss_pred             eCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcc
Confidence            4544 356778888877777899999999999999999999999999999999999987777888899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccccccc--chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY--QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~--~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      .+++.+++++++.|.+++        .|+||++||..+..+.++  ...|+++|+|+++|+++++.|+. ++||+|++|+
T Consensus       119 ~~~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~-~~gi~v~~v~  189 (254)
T PRK06114        119 TGVFLSCQAEARAMLENG--------GGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKSLAMEWV-GRGIRVNSIS  189 (254)
T ss_pred             hhhHHHHHHHHHHHHhcC--------CcEEEEECchhhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEe
Confidence            999999999999998765        689999999988776553  68999999999999999999999 8999999999


Q ss_pred             cCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       159 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ||+++|++...... .+..+.+....|++++.+|+|++..++||+++.+++++|+++.+|||+..
T Consensus       190 PG~i~t~~~~~~~~-~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~~tG~~i~~dgg~~~  253 (254)
T PRK06114        190 PGYTATPMNTRPEM-VHQTKLFEEQTPMQRMAKVDEMVGPAVFLLSDAASFCTGVDLLVDGGFVC  253 (254)
T ss_pred             ecCccCcccccccc-hHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCceEEECcCEec
Confidence            99999987543211 22233445667889999999999999999999999999999999999754

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=3.9e-34  Score=238.87  Aligned_cols=212  Identities=27%  Similarity=0.389  Sum_probs=183.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHHHh
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~   80 (257)
                      +|+ ++++++.+++.+.+.++.++.+|++++++++.+++++.+.+|++|++|||||+.. ..++.+.+.+.|++++++|+
T Consensus        37 ~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~  115 (272)
T PRK08589         37 DIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDM  115 (272)
T ss_pred             eCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHh
Confidence            577 7788888888877778999999999999999999999999999999999999764 36778889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .+++.++++++|+|.++         +|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||
T Consensus       116 ~~~~~~~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~-~~gI~v~~v~PG  185 (272)
T PRK08589        116 RGTFLMTKMLLPLMMEQ---------GGSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEYG-RDGIRANAIAPG  185 (272)
T ss_pred             HHHHHHHHHHHHHHHHc---------CCEEEEeCchhhcCCCCCCchHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecC
Confidence            99999999999999865         48899999999998888899999999999999999999999 899999999999


Q ss_pred             cccCCCCCCCCCh--HH----HHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          161 PIKDTAGVSKLAP--EE----IRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       161 ~v~t~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      +++|++.......  ..    +........+.+++.+|+|+++.+++|+++.+.+++|+.+.+|||....
T Consensus       186 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~vdgg~~~~  255 (272)
T PRK08589        186 TIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDSSFITGETIRIDGGVMAY  255 (272)
T ss_pred             cccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCcccC
Confidence            9999875432211  11    1111222457778899999999999999998899999999999997644

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=3.8e-34  Score=236.77  Aligned_cols=219  Identities=34%  Similarity=0.462  Sum_probs=184.7

Q ss_pred             CCCcHHHHHHHHHHHHhcCC---CeEEEEccCCCHHHHHHHHHHHHHH-hCCccEEEeCCCCCCCC-CCCCCCHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGI---PAIGLEGDVRKREDAVRVVESTINH-FGKLDILVNAAAGNFLV-PAEDLSPNGFRTV   75 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~---~~~~~~~Dls~~~~~~~~~~~~~~~-~g~id~li~~ag~~~~~-~~~~~~~~~~~~~   75 (257)
                      ++|++++++++.+++...+.   ++..+.||++++++++.++++..+. +|+||++|||||..... ++.+.+.++|++.
T Consensus        38 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~  117 (270)
T KOG0725|consen   38 TGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKI  117 (270)
T ss_pred             EeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHH
Confidence            47999999999999887744   5999999999999999999999999 79999999999976654 7999999999999


Q ss_pred             HHHHhHH-HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccc-hhhHHHHHHHHHHHHHHHHHhcCCCCeE
Q 025124           76 IEIDSVG-TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ-IHVSAAKAAVDSITRSLALEWGTDYAIR  153 (257)
Q Consensus        76 ~~~n~~~-~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~-~~Y~~sK~a~~~l~~~la~e~~~~~gi~  153 (257)
                      +++|++| .+.+.+.+.+.+.+++        .|.|+++||..+..+.+.. ..|+++|+|+++|+|+++.|+. ++|||
T Consensus       118 ~~~Nl~G~~~~~~~~a~~~~~~~~--------gg~I~~~ss~~~~~~~~~~~~~Y~~sK~al~~ltr~lA~El~-~~gIR  188 (270)
T KOG0725|consen  118 MATNLRGSAFCLKQAARPMLKKSK--------GGSIVNISSVAGVGPGPGSGVAYGVSKAALLQLTRSLAKELA-KHGIR  188 (270)
T ss_pred             HhhhchhHHHHHHHHHHHHHHhcC--------CceEEEEeccccccCCCCCcccchhHHHHHHHHHHHHHHHHh-hcCcE
Confidence            9999995 5556666666666655        7899999999888876666 7999999999999999999999 99999


Q ss_pred             EEEEecCcccCCCCCCCCCh---HHHHHH--hhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCC
Q 025124          154 VNGIAPGPIKDTAGVSKLAP---EEIRSK--ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRD  228 (257)
Q Consensus       154 v~~v~Pg~v~t~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~  228 (257)
                      ||+|.||.+.|++.......   ++..+.  .....|.++++.|+|+++.+.||+++.++|++|+.+.+|||+++..+..
T Consensus       189 vN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~eva~~~~fla~~~asyitG~~i~vdgG~~~~~~~~  268 (270)
T KOG0725|consen  189 VNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVGTPEEVAEAAAFLASDDASYITGQTIIVDGGFTVVGPSL  268 (270)
T ss_pred             EEEeecCcEeCCccccccccchhhHHhhhhccccccccCCccCHHHHHHhHHhhcCcccccccCCEEEEeCCEEeecccc
Confidence            99999999999872212121   222222  3345689999999999999999999988899999999999998865543

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-34  Score=236.88  Aligned_cols=212  Identities=25%  Similarity=0.344  Sum_probs=184.2

Q ss_pred             CcHHHHHHHHHHHHhc-CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC------CCCCCCCCHHHHHHH
Q 025124            3 RRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF------LVPAEDLSPNGFRTV   75 (257)
Q Consensus         3 r~~~~l~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~------~~~~~~~~~~~~~~~   75 (257)
                      |+.++++++.+++... +.++.++++|++|+++++++++++.+.++++|++|||||+..      ..++.+.+.++|++.
T Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~  120 (260)
T PRK08416         41 SNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNI  120 (260)
T ss_pred             CCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHH
Confidence            4677788888887654 668999999999999999999999999999999999998642      356677889999999


Q ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEE
Q 025124           76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN  155 (257)
Q Consensus        76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~  155 (257)
                      +++|+.+++.++++++|.|.+.+        .|+||++||..+..+.+++..|+++|+|+++|+++++.|+. ++||+|+
T Consensus       121 ~~~n~~~~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~el~-~~gi~v~  191 (260)
T PRK08416        121 YTATVNAFVVGAQEAAKRMEKVG--------GGSIISLSSTGNLVYIENYAGHGTSKAAVETMVKYAATELG-EKNIRVN  191 (260)
T ss_pred             HhhhhHHHHHHHHHHHHhhhccC--------CEEEEEEeccccccCCCCcccchhhHHHHHHHHHHHHHHhh-hhCeEEE
Confidence            99999999999999999998765        68999999999888888899999999999999999999999 8999999


Q ss_pred             EEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          156 GIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       156 ~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +|+||+++|++........+..+......+.+++.+|+|+++.+++|+++.+.+++|+.+.+|||..+
T Consensus       192 ~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~~~~~~~~~G~~i~vdgg~~~  259 (260)
T PRK08416        192 AVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPEDLAGACLFLCSEKASWLTGQTIVVDGGTTF  259 (260)
T ss_pred             EEeeCcccChhhhhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhhcccCcEEEEcCCeec
Confidence            99999999997543322233344445556788899999999999999999889999999999999654

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=6.5e-34  Score=235.08  Aligned_cols=207  Identities=30%  Similarity=0.442  Sum_probs=180.4

Q ss_pred             HHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHH
Q 025124            9 RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH   88 (257)
Q Consensus         9 ~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~   88 (257)
                      ++..+.+.+.+.++.++++|++|.++++++++++.++++++|++|||||.....++.+.+.++|++.+++|+.+++.+++
T Consensus        46 ~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~  125 (253)
T PRK08993         46 TETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQ  125 (253)
T ss_pred             HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHH
Confidence            44556666666778999999999999999999999999999999999998777778899999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCC
Q 025124           89 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  168 (257)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~  168 (257)
                      ++++.|.+++.       .|+||++||..+..+.+....|+++|+|+++|+++++.|+. ++||+|+.|+||+++|++..
T Consensus       126 ~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~-~~gi~v~~v~pG~v~T~~~~  197 (253)
T PRK08993        126 AAAKHFIAQGN-------GGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWA-KHNINVNAIAPGYMATNNTQ  197 (253)
T ss_pred             HHHHHHHhCCC-------CeEEEEECchhhccCCCCCcchHHHHHHHHHHHHHHHHHhh-hhCeEEEEEeeCcccCcchh
Confidence            99999987531       48999999999988888889999999999999999999999 89999999999999998764


Q ss_pred             CCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          169 SKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ...........+....|.+++..|+|++..+++|+++.+.+++|+.+.+|||...
T Consensus       198 ~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~~~~~~G~~~~~dgg~~~  252 (253)
T PRK08993        198 QLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLASSASDYINGYTIAVDGGWLA  252 (253)
T ss_pred             hhccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEECCCEec
Confidence            3322222233445566788999999999999999999999999999999999653

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.5e-34  Score=237.00  Aligned_cols=213  Identities=23%  Similarity=0.284  Sum_probs=185.4

Q ss_pred             CCCcHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI   78 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~   78 (257)
                      ++|+.++++++.+++.+.  +.+++++.+|++|.++++++++++.+.++++|++|||||.....++.+.+.++|++.+++
T Consensus        38 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~  117 (265)
T PRK07062         38 CGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELEL  117 (265)
T ss_pred             EeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence            368888899888888765  347889999999999999999999999999999999999877788889999999999999


Q ss_pred             HhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      |+.+++.++++++|.|++++        .|+||++||..+..+.++...|+++|+|+.+|+++++.|+. ++||+|++|+
T Consensus       118 n~~~~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~y~asKaal~~~~~~la~e~~-~~gi~v~~i~  188 (265)
T PRK07062        118 KYFSVINPTRAFLPLLRASA--------AASIVCVNSLLALQPEPHMVATSAARAGLLNLVKSLATELA-PKGVRVNSIL  188 (265)
T ss_pred             HhHHHHHHHHHHHHHHhccC--------CcEEEEeccccccCCCCCchHhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEe
Confidence            99999999999999998865        68999999999998888899999999999999999999999 8899999999


Q ss_pred             cCcccCCCCCCCCC--------hHHHHHHh--hhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          159 PGPIKDTAGVSKLA--------PEEIRSKA--TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       159 Pg~v~t~~~~~~~~--------~~~~~~~~--~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      ||+++|++....+.        ........  ....|++++.+|+|+++.+++|+++.+.+++|+.+.+|||+.
T Consensus       189 PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgg~~  262 (265)
T PRK07062        189 LGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAARALFFLASPLSSYTTGSHIDVSGGFA  262 (265)
T ss_pred             cCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHHhCchhcccccceEEEcCceE
Confidence            99999986532211        01111111  234577889999999999999999888999999999999954

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.5e-34  Score=238.12  Aligned_cols=210  Identities=23%  Similarity=0.289  Sum_probs=178.6

Q ss_pred             HHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHH
Q 025124            5 KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF   84 (257)
Q Consensus         5 ~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~   84 (257)
                      .++++++.+++.+.+.++.++.+|++|+++++++++++.+++|++|++|||||+....++.+.+.++|++++++|+.+++
T Consensus        49 ~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~  128 (286)
T PRK07791         49 GSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHF  128 (286)
T ss_pred             hhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHH
Confidence            37788888888877888999999999999999999999999999999999999877778889999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccC
Q 025124           85 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD  164 (257)
Q Consensus        85 ~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t  164 (257)
                      .++++++|+|.++....  ....|+||++||..+..+.+++..|+++|+|+++|+++++.|+. ++|||||+|+|| +.|
T Consensus       129 ~l~~~~~~~~~~~~~~~--~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~v~Pg-~~T  204 (286)
T PRK07791        129 ATLRHAAAYWRAESKAG--RAVDARIINTSSGAGLQGSVGQGNYSAAKAGIAALTLVAAAELG-RYGVTVNAIAPA-ART  204 (286)
T ss_pred             HHHHHHHHHHHHhcccC--CCCCcEEEEeCchhhCcCCCCchhhHHHHHHHHHHHHHHHHHHH-HhCeEEEEECCC-CCC
Confidence            99999999998643100  01147999999999999999999999999999999999999999 899999999999 777


Q ss_pred             CCCCCCCChHHHHHHhhhhccCC--CCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          165 TAGVSKLAPEEIRSKATDYMAAY--KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      ++...      .........+.+  +..+|+|+++.++||+++.+.+++|+.+.+|||....
T Consensus       205 ~~~~~------~~~~~~~~~~~~~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~~~~  260 (286)
T PRK07791        205 RMTET------VFAEMMAKPEEGEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGKISV  260 (286)
T ss_pred             Ccchh------hHHHHHhcCcccccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCceEE
Confidence            75421      111111222322  4579999999999999998999999999999997664

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=6.8e-34  Score=239.15  Aligned_cols=212  Identities=26%  Similarity=0.227  Sum_probs=174.7

Q ss_pred             CCcHHHHHHHHHHHHhc----------CC---CeEEEEccC--CC------------------HHHHHHHHHHHHHHhCC
Q 025124            2 GRRKTVLRSAVAALHSL----------GI---PAIGLEGDV--RK------------------REDAVRVVESTINHFGK   48 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~----------~~---~~~~~~~Dl--s~------------------~~~~~~~~~~~~~~~g~   48 (257)
                      +|+.++|+++.+.+.+.          +.   ....+.+|+  ++                  +++++++++++.+++|+
T Consensus        41 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~  120 (303)
T PLN02730         41 GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGS  120 (303)
T ss_pred             EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCC
Confidence            36777888887777531          11   146788999  43                  44899999999999999


Q ss_pred             ccEEEeCCCCCC--CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccc-
Q 025124           49 LDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ-  125 (257)
Q Consensus        49 id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~-  125 (257)
                      ||+||||||...  ..++.+.+.++|++++++|+.+++.++++++|.|.+          .|+||++||..+..+.+++ 
T Consensus       121 iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~m~~----------~G~II~isS~a~~~~~p~~~  190 (303)
T PLN02730        121 IDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMNP----------GGASISLTYIASERIIPGYG  190 (303)
T ss_pred             CCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc----------CCEEEEEechhhcCCCCCCc
Confidence            999999998533  378899999999999999999999999999999975          5889999999988888765 


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCC-CCeEEEEEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhcc
Q 025124          126 IHVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  204 (257)
Q Consensus       126 ~~Y~~sK~a~~~l~~~la~e~~~~-~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  204 (257)
                      +.|+++|+|+++|+++|+.|+. + +|||||+|+||+++|++.......++.........|+.++.+|+|++.+++||++
T Consensus       191 ~~Y~asKaAl~~l~~~la~El~-~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~peevA~~~~fLaS  269 (303)
T PLN02730        191 GGMSSAKAALESDTRVLAFEAG-RKYKIRVNTISAGPLGSRAAKAIGFIDDMIEYSYANAPLQKELTADEVGNAAAFLAS  269 (303)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhC-cCCCeEEEEEeeCCccCchhhcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            5899999999999999999997 6 7999999999999999764311112222333344577788999999999999999


Q ss_pred             CCCCcccCcEEEecCCcccC
Q 025124          205 DAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       205 ~~~~~~~G~~~~~dgg~~~~  224 (257)
                      +.+.+++|+.+.+|||..+.
T Consensus       270 ~~a~~itG~~l~vdGG~~~~  289 (303)
T PLN02730        270 PLASAITGATIYVDNGLNAM  289 (303)
T ss_pred             ccccCccCCEEEECCCcccc
Confidence            99999999999999997554

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-33  Score=233.43  Aligned_cols=212  Identities=31%  Similarity=0.427  Sum_probs=185.5

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+ ++++++.+.+.+.+.++.++.+|+++.++++.+++++.+.+|++|++|||+|.....++.+.+.++|+..+++|+.
T Consensus        46 ~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~  124 (258)
T PRK06935         46 THG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLN  124 (258)
T ss_pred             eCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCH
Confidence            455 5566777777766778999999999999999999999999999999999999877778888899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.++++++++|.+++        .|+||++||..+..+.+++..|+++|+|+++|+++++.|+. ++||+|+.|+||+
T Consensus       125 ~~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~i~PG~  195 (258)
T PRK06935        125 SVYHLSQAVAKVMAKQG--------SGKIINIASMLSFQGGKFVPAYTASKHGVAGLTKAFANELA-AYNIQVNAIAPGY  195 (258)
T ss_pred             HHHHHHHHHHHHHHhcC--------CeEEEEECCHHhccCCCCchhhHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEecc
Confidence            99999999999999876        68999999999988888899999999999999999999999 8999999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ++|++.......+..........+.+++.+|+|++..+.||+++.+.+++|+++.+|||+.+
T Consensus       196 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  257 (258)
T PRK06935        196 IKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLASRASDYVNGHILAVDGGWLV  257 (258)
T ss_pred             ccccchhhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCCeec
Confidence            99987543322222333344556788999999999999999999999999999999999654

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.9e-34  Score=234.99  Aligned_cols=204  Identities=24%  Similarity=0.195  Sum_probs=168.7

Q ss_pred             HHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHHHHhH
Q 025124            6 TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         6 ~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +.++++.+++   +.++.++++|++|+++++++++++.+++|++|++|||||+...    .++.+.+.++|++++++|+.
T Consensus        46 ~~~~~~~~~~---~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~  122 (256)
T PRK07889         46 RLTERIAKRL---PEPAPVLELDVTNEEHLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAY  122 (256)
T ss_pred             hHHHHHHHhc---CCCCcEEeCCCCCHHHHHHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhH
Confidence            4455554444   3367889999999999999999999999999999999997643    35778899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.++++++|+|.+          +|+|+++++. +..+.+.+..|++||+|+.+|+++++.|+. ++|||||+|+||+
T Consensus       123 ~~~~l~~~~~~~m~~----------~g~Iv~is~~-~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrvn~v~PG~  190 (256)
T PRK07889        123 SLKSLAKALLPLMNE----------GGSIVGLDFD-ATVAWPAYDWMGVAKAALESTNRYLARDLG-PRGIRVNLVAAGP  190 (256)
T ss_pred             HHHHHHHHHHHhccc----------CceEEEEeec-ccccCCccchhHHHHHHHHHHHHHHHHHhh-hcCeEEEeeccCc
Confidence            999999999999974          5789999875 345567788899999999999999999999 8999999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCC-CCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAY-KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      ++|++........+..+......|++ ++.+|+|+|+.+++|+++.+.+++|+++.+|||....
T Consensus       191 v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~evA~~v~~l~s~~~~~~tG~~i~vdgg~~~~  254 (256)
T PRK07889        191 IRTLAAKAIPGFELLEEGWDERAPLGWDVKDPTPVARAVVALLSDWFPATTGEIVHVDGGAHAM  254 (256)
T ss_pred             ccChhhhcccCcHHHHHHHHhcCccccccCCHHHHHHHHHHHhCcccccccceEEEEcCceecc
Confidence            99987533221122223334455666 5899999999999999998999999999999997654

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.3e-33  Score=231.30  Aligned_cols=203  Identities=24%  Similarity=0.306  Sum_probs=181.4

Q ss_pred             HHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHH
Q 025124            5 KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF   84 (257)
Q Consensus         5 ~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~   84 (257)
                      .+++.++.+++.+.+.++.++++|+++.++++++++++.+.+|++|++|||||.....++.+.+.++|+..+++|+.+++
T Consensus        53 ~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~  132 (256)
T PRK12859         53 QDEQIQLQEELLKNGVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATT  132 (256)
T ss_pred             HHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH
Confidence            45566677778877888999999999999999999999999999999999999877788899999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccC
Q 025124           85 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD  164 (257)
Q Consensus        85 ~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t  164 (257)
                      .++++++|.|.++.        .|+||++||..+..+.+++..|+++|+++++|+++++.|+. ++||++++|+||+++|
T Consensus       133 ~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~-~~~i~v~~v~PG~i~t  203 (256)
T PRK12859        133 LLSSQFARGFDKKS--------GGRIINMTSGQFQGPMVGELAYAATKGAIDALTSSLAAEVA-HLGITVNAINPGPTDT  203 (256)
T ss_pred             HHHHHHHHHHhhcC--------CeEEEEEcccccCCCCCCchHHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEEccccC
Confidence            99999999998765        68999999999998889999999999999999999999999 8899999999999998


Q ss_pred             CCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          165 TAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                      ++..     ....+......+.++..+|+|+++.+++|+++.+.+++|+++.+|||+
T Consensus       204 ~~~~-----~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgg~  255 (256)
T PRK12859        204 GWMT-----EEIKQGLLPMFPFGRIGEPKDAARLIKFLASEEAEWITGQIIHSEGGF  255 (256)
T ss_pred             CCCC-----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEeCCCc
Confidence            8532     223333445557778889999999999999998899999999999995

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=2e-33  Score=236.97  Aligned_cols=209  Identities=26%  Similarity=0.344  Sum_probs=181.5

Q ss_pred             cHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHHHhHH
Q 025124            4 RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVG   82 (257)
Q Consensus         4 ~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~   82 (257)
                      +.+.++++.+.+.+.+.++.++.+|++|.+++..+++++.+.++++|++|||||... ..++.+.+.++|++++++|+.+
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g  163 (294)
T PRK07985         84 EEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFA  163 (294)
T ss_pred             chhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHH
Confidence            345567777777666778889999999999999999999999999999999999653 4678888999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcc
Q 025124           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (257)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v  162 (257)
                      ++.++++++|+|.+          .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||++++|+||++
T Consensus       164 ~~~l~~~~~~~m~~----------~g~iv~iSS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrvn~i~PG~v  232 (294)
T PRK07985        164 LFWLTQEAIPLLPK----------GASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVA-EKGIRVNIVAPGPI  232 (294)
T ss_pred             HHHHHHHHHHhhhc----------CCEEEEECCchhccCCCCcchhHHHHHHHHHHHHHHHHHHh-HhCcEEEEEECCcC
Confidence            99999999999864          57899999999998888899999999999999999999998 89999999999999


Q ss_pred             cCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          163 KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       163 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +|++........+....+....+++++.+|+|+|.+++||+++.+.+++|+.+.+|||..+
T Consensus       233 ~t~~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~~~fL~s~~~~~itG~~i~vdgG~~~  293 (294)
T PRK07985        233 WTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGGEHL  293 (294)
T ss_pred             ccccccccCCCHHHHHHHhccCCCCCCCCHHHHHHHHHhhhChhcCCccccEEeeCCCeeC
Confidence            9997532222233334455566788899999999999999999999999999999999754

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-33  Score=230.25  Aligned_cols=219  Identities=42%  Similarity=0.635  Sum_probs=188.5

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.+++.+.+.++.++.+|++++++++++++++.+.++++|++|||+|.....++.+.+.++|++++++|+.
T Consensus        32 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~  111 (252)
T PRK07677         32 GRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLN  111 (252)
T ss_pred             eCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhH
Confidence            68888888888888776678999999999999999999999999999999999999766677889999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      ++++++++++++|.+...       .|+||++||..+..+.+....|+++|+|+++|+++++.|+.+.+||++++|+||+
T Consensus       112 ~~~~l~~~~~~~~~~~~~-------~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~  184 (252)
T PRK07677        112 GTFYCSQAVGKYWIEKGI-------KGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGP  184 (252)
T ss_pred             HHHHHHHHHHHHHHhcCC-------CEEEEEEcChhhccCCCCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecc
Confidence            999999999999876431       5899999999998888888999999999999999999999624799999999999


Q ss_pred             ccCCCCCCC-CChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCC
Q 025124          162 IKDTAGVSK-LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPR  227 (257)
Q Consensus       162 v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~  227 (257)
                      ++|++.... ...++.........+.+++.+|+|+++.+.+|+++.+.+++|+.+.+|||.++...+
T Consensus       185 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg~~~~~~~  251 (252)
T PRK07677        185 IERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLLSDEAAYINGTCITMDGGQWLNQYP  251 (252)
T ss_pred             cccccccccccCCHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCccccccCCCEEEECCCeecCCCC
Confidence            996543222 122334444555667788999999999999999988889999999999998877654

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-33  Score=230.95  Aligned_cols=209  Identities=29%  Similarity=0.344  Sum_probs=179.1

Q ss_pred             CcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHH----hC--CccEEEeCCCCCCCCCCCCCCHHHHHHHH
Q 025124            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH----FG--KLDILVNAAAGNFLVPAEDLSPNGFRTVI   76 (257)
Q Consensus         3 r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~----~g--~id~li~~ag~~~~~~~~~~~~~~~~~~~   76 (257)
                      |+.++++++.+++.+.+.++..+.+|+++.+++..+++++.+.    ++  ++|++|||||+....++.+.+.++|++++
T Consensus        37 ~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~  116 (252)
T PRK12747         37 NRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMV  116 (252)
T ss_pred             CCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHH
Confidence            5677788888888877778889999999999999999988763    34  89999999998666778889999999999


Q ss_pred             HHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEE
Q 025124           77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (257)
Q Consensus        77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~  156 (257)
                      ++|+.+++.++++++|.|.+          .|+||++||..+..+.++...|++||+|+++|+++++.|+. ++||++|+
T Consensus       117 ~vN~~~~~~l~~~~~~~~~~----------~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~-~~girvn~  185 (252)
T PRK12747        117 SVNAKAPFFIIQQALSRLRD----------NSRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLG-ARGITVNA  185 (252)
T ss_pred             HHhhhHHHHHHHHHHHHhhc----------CCeEEEECCcccccCCCCchhHHHHHHHHHHHHHHHHHHHh-HcCCEEEE
Confidence            99999999999999999965          57899999999999988999999999999999999999999 89999999


Q ss_pred             EecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          157 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       157 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      |+||+++|++..................+.+++.+|+|+++++.||+++.+.+++|+.+.+|||..
T Consensus       186 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgg~~  251 (252)
T PRK12747        186 ILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGSC  251 (252)
T ss_pred             EecCCccCchhhhcccCHHHHHHHHhcCcccCCCCHHHHHHHHHHHcCccccCcCCcEEEecCCcc
Confidence            999999999754322222222222223366788999999999999999888999999999999965

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=2.6e-33  Score=234.55  Aligned_cols=214  Identities=31%  Similarity=0.394  Sum_probs=186.5

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC---------------CCCCC
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL---------------VPAED   66 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~---------------~~~~~   66 (257)
                      +|+.+.++++.+++.+.+.++.++++|++++++++.+++++.++++++|++|||||....               .++.+
T Consensus        41 ~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~  120 (278)
T PRK08277         41 DRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFD  120 (278)
T ss_pred             eCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCccccccccccccccccccccc
Confidence            678888888888888777789999999999999999999999999999999999995432               34678


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHh
Q 025124           67 LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW  146 (257)
Q Consensus        67 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~  146 (257)
                      .+.++|+..+++|+.+++.+++++++.|.+++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+
T Consensus       121 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--------~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~  192 (278)
T PRK08277        121 LDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRK--------GGNIINISSMNAFTPLTKVPAYSAAKAAISNFTQWLAVHF  192 (278)
T ss_pred             CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC--------CcEEEEEccchhcCCCCCCchhHHHHHHHHHHHHHHHHHh
Confidence            88999999999999999999999999998876        6899999999999999999999999999999999999999


Q ss_pred             cCCCCeEEEEEecCcccCCCCCCCCCh-----HHHHHHhhhhccCCCCCCHHhHHHHHHHhccC-CCCcccCcEEEecCC
Q 025124          147 GTDYAIRVNGIAPGPIKDTAGVSKLAP-----EEIRSKATDYMAAYKFGEKWDIAMAALYLASD-AGKYVNGNTLIVDGG  220 (257)
Q Consensus       147 ~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~-~~~~~~G~~~~~dgg  220 (257)
                      . ++||++++|+||++.|++.......     .+.........|++++.+|+|+|++++||+++ .+.+++|+.+.+|||
T Consensus       193 ~-~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG  271 (278)
T PRK08277        193 A-KVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGG  271 (278)
T ss_pred             C-ccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCCccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCC
Confidence            9 8999999999999999864322111     12233344567888999999999999999999 899999999999999


Q ss_pred             cccC
Q 025124          221 NWLS  224 (257)
Q Consensus       221 ~~~~  224 (257)
                      +...
T Consensus       272 ~~~~  275 (278)
T PRK08277        272 FSAY  275 (278)
T ss_pred             eecc
Confidence            7643

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-33  Score=230.17  Aligned_cols=214  Identities=25%  Similarity=0.328  Sum_probs=189.3

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n   79 (257)
                      ++|+.+++++..+++.+.+.++.++.+|+++.+++..+++++.+.++++|++|||+|.... .++.+.+.++|++.+++|
T Consensus        37 ~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n  116 (253)
T PRK06172         37 ADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVN  116 (253)
T ss_pred             EeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHh
Confidence            3688888888888888778889999999999999999999999999999999999997544 457888999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.+++.++++++|+|.++.        .++||++||..+..+.+++..|+++|+++++|+++++.|+. ++||++++|+|
T Consensus       117 ~~~~~~~~~~~~~~~~~~~--------~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~-~~~i~v~~i~P  187 (253)
T PRK06172        117 VKGVWLCMKYQIPLMLAQG--------GGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYA-KKGIRVNAVCP  187 (253)
T ss_pred             hHHHHHHHHHHHHHHHhcC--------CcEEEEECchhhccCCCCCchhHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEe
Confidence            9999999999999998765        68999999999999999999999999999999999999998 88999999999


Q ss_pred             CcccCCCCCCCCC-hHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          160 GPIKDTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       160 g~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      |+++|++...... .......+....+..++.+|+|+++.++||+++.+.+++|+++.+|||++.
T Consensus       188 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ia~~~~~l~~~~~~~~~G~~i~~dgg~~~  252 (253)
T PRK06172        188 AVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYLCSDGASFTTGHALMVDGGATA  252 (253)
T ss_pred             CCccChhhhhhcccChHHHHHHhccCCCCCccCHHHHHHHHHHHhCccccCcCCcEEEECCCccC
Confidence            9999997654322 233344455566778899999999999999999899999999999999753

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-33  Score=230.19  Aligned_cols=213  Identities=28%  Similarity=0.422  Sum_probs=190.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|++++++++.+.+...+.++.++.+|++|.++++.+++++.++++++|++|||+|.....++.+.+.++|++++++|+.
T Consensus        41 ~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~  120 (255)
T PRK07523         41 GRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNIS  120 (255)
T ss_pred             eCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            68888888888888877778999999999999999999999999999999999999877788889999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.+++++.++|.++.        .|+||++||..+..+.+++..|+++|++++.++++++.|+. ++||+|++|+||+
T Consensus       121 ~~~~l~~~~~~~~~~~~--------~g~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~~a~e~~-~~gi~v~~i~pg~  191 (255)
T PRK07523        121 SVFYVGQAVARHMIARG--------AGKIINIASVQSALARPGIAPYTATKGAVGNLTKGMATDWA-KHGLQCNAIAPGY  191 (255)
T ss_pred             HHHHHHHHHHHHHHHhC--------CeEEEEEccchhccCCCCCccHHHHHHHHHHHHHHHHHHhh-HhCeEEEEEEECc
Confidence            99999999999998865        68999999999888888999999999999999999999998 8999999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +.|++.............+....+.+++.+|+|+|+++++|+++.+.+++|+.+.+|||+..
T Consensus       192 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg~~~  253 (255)
T PRK07523        192 FDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLASDASSFVNGHVLYVDGGITA  253 (255)
T ss_pred             ccCchhhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCcEEEECCCeec
Confidence            99987543332334444555667888999999999999999999889999999999999753

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=8.1e-33  Score=234.03  Aligned_cols=208  Identities=27%  Similarity=0.388  Sum_probs=182.0

Q ss_pred             HHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHHHhHHH
Q 025124            5 KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGT   83 (257)
Q Consensus         5 ~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~   83 (257)
                      ...++++.+.+.+.+.++.++.||+++.++++++++++.+.++++|+||||||... ..++.+.+.++|+..+++|+.++
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~  170 (300)
T PRK06128         91 EQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAM  170 (300)
T ss_pred             hHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHH
Confidence            34566777778777778999999999999999999999999999999999999753 46788899999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccc
Q 025124           84 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK  163 (257)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~  163 (257)
                      +++++++++.|.+          .++||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+|++|+||+++
T Consensus       171 ~~l~~~~~~~~~~----------~~~iv~~sS~~~~~~~~~~~~Y~asK~a~~~~~~~la~el~-~~gI~v~~v~PG~i~  239 (300)
T PRK06128        171 FWLCKAAIPHLPP----------GASIINTGSIQSYQPSPTLLDYASTKAAIVAFTKALAKQVA-EKGIRVNAVAPGPVW  239 (300)
T ss_pred             HHHHHHHHHhcCc----------CCEEEEECCccccCCCCCchhHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEEECcCc
Confidence            9999999999864          57899999999998888999999999999999999999998 899999999999999


Q ss_pred             CCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          164 DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       164 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      |++........+....+....+.+++++|+|++.++++|+++.+.+++|+.+.+|||..+
T Consensus       240 t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~~~G~~~~v~gg~~~  299 (300)
T PRK06128        240 TPLQPSGGQPPEKIPDFGSETPMKRPGQPVEMAPLYVLLASQESSYVTGEVFGVTGGLLL  299 (300)
T ss_pred             CCCcccCCCCHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccCccCcEEeeCCCEeC
Confidence            997543222233344455567888999999999999999999889999999999999654

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=9.8e-33  Score=228.29  Aligned_cols=214  Identities=27%  Similarity=0.358  Sum_probs=186.8

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.+++.+.+.++.++.+|++++++++++++++.++++++|++|||+|.....++.+.+.++|+..+++|+.
T Consensus        33 ~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~  112 (256)
T PRK08643         33 DYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVG  112 (256)
T ss_pred             eCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhH
Confidence            68888888888888877778899999999999999999999999999999999999877778888999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.+++.+++.|.+.+.       .++||++||..+..+.++...|+++|++++.|++.++.|+. ++||+|++|+||+
T Consensus       113 ~~~~~~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~i~Pg~  184 (256)
T PRK08643        113 GVIWGIQAAQEAFKKLGH-------GGKIINATSQAGVVGNPELAVYSSTKFAVRGLTQTAARDLA-SEGITVNAYAPGI  184 (256)
T ss_pred             HHHHHHHHHHHHHHhcCC-------CCEEEEECccccccCCCCCchhHHHHHHHHHHHHHHHHHhc-ccCcEEEEEeeCC
Confidence            999999999999987531       47899999999998988899999999999999999999998 8999999999999


Q ss_pred             ccCCCCCCCCC--------hHH-HHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          162 IKDTAGVSKLA--------PEE-IRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       162 v~t~~~~~~~~--------~~~-~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ++|++......        ... ....+....+.+++.+|+|++..+.+|+++.+.+++|+.+.+|||..+
T Consensus       185 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~L~~~~~~~~~G~~i~vdgg~~~  255 (256)
T PRK08643        185 VKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSFLAGPDSDYITGQTIIVDGGMVF  255 (256)
T ss_pred             CcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEeCCCeec
Confidence            99987542110        011 122344456778889999999999999999999999999999999654

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-32  Score=226.92  Aligned_cols=213  Identities=31%  Similarity=0.388  Sum_probs=188.4

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n   79 (257)
                      ++|+.++++++.+++.+.+.++.++.+|+++.++++.+++++.+.++++|++|||+|... ..++.+.+.++|+..+++|
T Consensus        38 ~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n  117 (252)
T PRK07035         38 SSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVN  117 (252)
T ss_pred             EeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHh
Confidence            368888889999998877778889999999999999999999999999999999999643 4667788999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.+++.++++++++|.++.        .++|+++||..+..+.++++.|+++|+++++|+++++.|+. ++||++++|+|
T Consensus       118 ~~~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~Y~~sK~al~~~~~~l~~e~~-~~gi~v~~i~P  188 (252)
T PRK07035        118 IRGYFFMSVEAGKLMKEQG--------GGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECA-PFGIRVNALLP  188 (252)
T ss_pred             hHHHHHHHHHHHHHHHhCC--------CcEEEEECchhhcCCCCCCcchHHHHHHHHHHHHHHHHHHh-hcCEEEEEEee
Confidence            9999999999999998765        68999999999988888999999999999999999999999 89999999999


Q ss_pred             CcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       160 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      |.++|++...........+......+..+..+|+|+++.+++|+++...+++|+++.+|||+.
T Consensus       189 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~dgg~~  251 (252)
T PRK07035        189 GLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLASDASSYTTGECLNVDGGYL  251 (252)
T ss_pred             ccccCcccccccCCHHHHHHHHccCCCCCcCCHHHHHHHHHHHhCccccCccCCEEEeCCCcC
Confidence            999998765443333444445556677889999999999999999999999999999999964

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.5e-33  Score=229.17  Aligned_cols=210  Identities=24%  Similarity=0.303  Sum_probs=177.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.+++   +.++.++++|++|+++++++++++.+.++++|++|||||......+ +.+.++|++.+++|+.
T Consensus        37 ~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~-~~~~~~~~~~~~~n~~  112 (261)
T PRK08265         37 DIDADNGAAVAASL---GERARFIATDITDDAAIERAVATVVARFGRVDILVNLACTYLDDGL-ASSRADWLAALDVNLV  112 (261)
T ss_pred             eCCHHHHHHHHHHh---CCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCcC-cCCHHHHHHHHhHhhH
Confidence            67877777766655   4578899999999999999999999999999999999997554433 5789999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.+++++++.|. +.        .|+||++||..+..+.+++..|+++|+++++|+++++.|+. ++||++|+|+||+
T Consensus       113 ~~~~~~~~~~~~~~-~~--------~g~ii~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~  182 (261)
T PRK08265        113 SAAMLAQAAHPHLA-RG--------GGAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRSMAMDLA-PDGIRVNSVSPGW  182 (261)
T ss_pred             HHHHHHHHHHHHHh-cC--------CcEEEEECchhhccCCCCCchhHHHHHHHHHHHHHHHHHhc-ccCEEEEEEccCC
Confidence            99999999999997 44        68999999999999999999999999999999999999999 8999999999999


Q ss_pred             ccCCCCCCCCCh-HHHHHHh-hhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCC
Q 025124          162 IKDTAGVSKLAP-EEIRSKA-TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSN  225 (257)
Q Consensus       162 v~t~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~  225 (257)
                      ++|++....... ....+.. ....+.+++.+|+|+|++++||+++.+.+++|+.+.+|||+.+..
T Consensus       183 ~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~~tG~~i~vdgg~~~~~  248 (261)
T PRK08265        183 TWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLCSDAASFVTGADYAVDGGYSALG  248 (261)
T ss_pred             ccChhhhhhcccchhHHHHhhcccCCCCCccCHHHHHHHHHHHcCccccCccCcEEEECCCeeccC
Confidence            999875322111 1111111 223577889999999999999999989999999999999986654

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-32  Score=225.74  Aligned_cols=213  Identities=31%  Similarity=0.469  Sum_probs=187.2

Q ss_pred             cHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHH
Q 025124            4 RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT   83 (257)
Q Consensus         4 ~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~   83 (257)
                      +.+.++.+.+++...+.++.++.+|++|.++++++++++.+.++++|++|||+|.....++.+.+.++|++.+++|+.++
T Consensus        41 ~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~  120 (261)
T PRK08936         41 DEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGA  120 (261)
T ss_pred             CHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHH
Confidence            45567778888877777889999999999999999999999999999999999987777888899999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccc
Q 025124           84 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK  163 (257)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~  163 (257)
                      +.+++.++++|.++..       .|+||++||..+..+.+++..|+++|+|+++|+++++.|+. ++||+|++|+||+++
T Consensus       121 ~~~~~~~l~~~~~~~~-------~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~-~~gi~v~~v~pg~v~  192 (261)
T PRK08936        121 FLGSREAIKYFVEHDI-------KGNIINMSSVHEQIPWPLFVHYAASKGGVKLMTETLAMEYA-PKGIRVNNIGPGAIN  192 (261)
T ss_pred             HHHHHHHHHHHHhcCC-------CcEEEEEccccccCCCCCCcccHHHHHHHHHHHHHHHHHHh-hcCeEEEEEEECcCC
Confidence            9999999999987542       58999999999888888999999999999999999999998 889999999999999


Q ss_pred             CCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          164 DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       164 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      |++....+...+.........+.+++.+|+|+++.+.||+++.+.+++|+.+.+|||+.+.
T Consensus       193 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~d~g~~~~  253 (261)
T PRK08936        193 TPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAWLASSEASYVTGITLFADGGMTLY  253 (261)
T ss_pred             CCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCccCcEEEECCCcccC
Confidence            9975543333333334445667788999999999999999999999999999999997754

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-32  Score=225.96  Aligned_cols=213  Identities=31%  Similarity=0.394  Sum_probs=190.8

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|+.+.++++.+++.+.+.++.++.+|+++++++.++++++.+.++++|++|||+|.....++.+.+.++|++.+++|+
T Consensus        41 ~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~  120 (256)
T PRK06124         41 NGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDL  120 (256)
T ss_pred             EeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHh
Confidence            36888888888888887777899999999999999999999999999999999999987777888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .+++.+.+.+++.|.+++        .++||++||..+..+.++...|+++|+++++++++++.|+. +.||++++|+||
T Consensus       121 ~~~~~~~~~~~~~~~~~~--------~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~i~pg  191 (256)
T PRK06124        121 VAPILLSRLAAQRMKRQG--------YGRIIAITSIAGQVARAGDAVYPAAKQGLTGLMRALAAEFG-PHGITSNAIAPG  191 (256)
T ss_pred             HHHHHHHHHHHHHHHhcC--------CcEEEEEeechhccCCCCccHhHHHHHHHHHHHHHHHHHHH-HhCcEEEEEEEC
Confidence            999999999999998766        68999999999998999999999999999999999999998 889999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      +++|++.......+..........+.+++.+|+|+++.+++|+++.+++++|+.+.+|||+.
T Consensus       192 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~i~~dgg~~  253 (256)
T PRK06124        192 YFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLASPAASYVNGHVLAVDGGYS  253 (256)
T ss_pred             CccCcchhhhccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCcCCCEEEECCCcc
Confidence            99998754333334444455566678889999999999999999999999999999999965

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-32  Score=229.50  Aligned_cols=204  Identities=23%  Similarity=0.268  Sum_probs=171.2

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|+.++++++.+++.+.+.++.++.+|++|+++++.+++++ ++++++|++|||||+..       ..++|+.++++|+
T Consensus        30 ~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~id~li~nAG~~~-------~~~~~~~~~~vN~  101 (275)
T PRK06940         30 ADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTLGPVTGLVHTAGVSP-------SQASPEAILKVDL  101 (275)
T ss_pred             EeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-HhcCCCCEEEECCCcCC-------chhhHHHHHHHhh
Confidence            368888888888888776778999999999999999999998 56899999999999742       2367899999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccccc------------------------------ccchhhHH
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT------------------------------WYQIHVSA  130 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~------------------------------~~~~~Y~~  130 (257)
                      .++++++++++|.|.+          +|++|+++|..+..+.                              +++..|++
T Consensus       102 ~g~~~l~~~~~~~m~~----------~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~a  171 (275)
T PRK06940        102 YGTALVLEEFGKVIAP----------GGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQI  171 (275)
T ss_pred             HHHHHHHHHHHHHHhh----------CCCEEEEEecccccCcccchhhhccccccccccccccccccccccCCccchhHH
Confidence            9999999999999965          4668999998776542                              24678999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCC--hHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCC
Q 025124          131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK  208 (257)
Q Consensus       131 sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  208 (257)
                      ||+|+.+|+++++.|+. ++|||||+|+||+++|++......  ..+.........|++++.+|+|+|+.++||+++.++
T Consensus       172 sKaa~~~~~~~la~e~~-~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peeia~~~~fL~s~~~~  250 (275)
T PRK06940        172 AKRANALRVMAEAVKWG-ERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPAGRPGTPDEIAALAEFLMGPRGS  250 (275)
T ss_pred             HHHHHHHHHHHHHHHHc-cCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCCcccCCCHHHHHHHHHHHcCcccC
Confidence            99999999999999998 899999999999999997543221  112223344456788999999999999999999999


Q ss_pred             cccCcEEEecCCccc
Q 025124          209 YVNGNTLIVDGGNWL  223 (257)
Q Consensus       209 ~~~G~~~~~dgg~~~  223 (257)
                      +++|+.+.+|||...
T Consensus       251 ~itG~~i~vdgg~~~  265 (275)
T PRK06940        251 FITGSDFLVDGGATA  265 (275)
T ss_pred             cccCceEEEcCCeEE
Confidence            999999999999654

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=2.8e-32  Score=225.78  Aligned_cols=214  Identities=28%  Similarity=0.390  Sum_probs=190.0

Q ss_pred             CCCcHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI   78 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~   78 (257)
                      ++|+.+.++++.+++.+.  +.++.++.+|++++++++.+++++.+.++++|++|||+|.....++.+.+.++|++.+++
T Consensus        39 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~  118 (257)
T PRK09242         39 VARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFET  118 (257)
T ss_pred             EeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhh
Confidence            368888888888888766  568899999999999999999999999999999999999876677888999999999999


Q ss_pred             HhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      |+.+++.++++++|+|.++.        .++||++||..+..+.++.+.|+++|++++.|+++++.|+. +.||++++|+
T Consensus       119 n~~~~~~l~~~~~~~~~~~~--------~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~i~  189 (257)
T PRK09242        119 NLFSAFELSRYAHPLLKQHA--------SSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVEWA-EDGIRVNAVA  189 (257)
T ss_pred             hhHHHHHHHHHHHHHHHhcC--------CceEEEECccccCCCCCCCcchHHHHHHHHHHHHHHHHHHH-HhCeEEEEEE
Confidence            99999999999999998865        68999999999998888999999999999999999999998 8899999999


Q ss_pred             cCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       159 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ||+++|++........+..+......+..++.+|+|++..+.+|+++...+++|+.+.+|||...
T Consensus       190 Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~gg~~~  254 (257)
T PRK09242        190 PWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFLCMPAASYITGQCIAVDGGFLR  254 (257)
T ss_pred             ECCCCCcccccccCChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccccccCCEEEECCCeEe
Confidence            99999998654443344444455566778889999999999999998888899999999998654

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-32  Score=225.31  Aligned_cols=211  Identities=27%  Similarity=0.421  Sum_probs=185.5

Q ss_pred             CCcHHHHHHHHHHHHhc-C-CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSL-G-IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~-~-~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      +|+.+++++..+++.+. + .++.++++|++++++++.+++++.+.+|++|++|||+|.....++.+.+.++|++.+++|
T Consensus        49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n  128 (262)
T PRK07831         49 DIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVT  128 (262)
T ss_pred             eCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHh
Confidence            67888888888888763 4 468899999999999999999999999999999999998777788899999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.+++.++++++|.|.++..       .|+|++++|..+..+.++...|+++|+|+++|+++++.|+. ++||+|++|+|
T Consensus       129 ~~~~~~l~~~~~~~~~~~~~-------~g~iv~~ss~~~~~~~~~~~~Y~~sKaal~~~~~~la~e~~-~~gI~v~~i~P  200 (262)
T PRK07831        129 LTGTFRATRAALRYMRARGH-------GGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRCSALEAA-EYGVRINAVAP  200 (262)
T ss_pred             hHHHHHHHHHHHHHHHhcCC-------CcEEEEeCchhhcCCCCCCcchHHHHHHHHHHHHHHHHHhC-ccCeEEEEEee
Confidence            99999999999999987531       48899999999888888899999999999999999999999 89999999999


Q ss_pred             CcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       160 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                      |+++|++..... ..+..+......+++++.+|+|+++.++||+++.+.+++|+++.+|+++
T Consensus       201 g~~~t~~~~~~~-~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~s~~~~~itG~~i~v~~~~  261 (262)
T PRK07831        201 SIAMHPFLAKVT-SAELLDELAAREAFGRAAEPWEVANVIAFLASDYSSYLTGEVVSVSSQH  261 (262)
T ss_pred             CCccCccccccc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcCCceEEeCCCC
Confidence            999999764332 2334444455667889999999999999999999999999999999874

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=6.4e-32  Score=223.56  Aligned_cols=216  Identities=27%  Similarity=0.406  Sum_probs=188.9

Q ss_pred             CcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHH
Q 025124            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG   82 (257)
Q Consensus         3 r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~   82 (257)
                      |+.+.++++.+++...+.+++++.+|+++.++++.+++++.++++++|++|||+|......+.+.+.++|++++++|+.+
T Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~  114 (256)
T PRK12743         35 SDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDG  114 (256)
T ss_pred             CChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHH
Confidence            56677888888888878889999999999999999999999999999999999998776778889999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcc
Q 025124           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (257)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v  162 (257)
                      ++.++++++++|.+++.       .|+||++||..+..+.++...|+++|+++++|+++++.++. ++||++++|+||++
T Consensus       115 ~~~l~~~~~~~l~~~~~-------~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~-~~~i~v~~v~Pg~~  186 (256)
T PRK12743        115 AFLCSQIAARHMVKQGQ-------GGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALELV-EHGILVNAVAPGAI  186 (256)
T ss_pred             HHHHHHHHHHHHHhcCC-------CeEEEEEeeccccCCCCCcchhHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEeCCc
Confidence            99999999999976531       58999999999988989999999999999999999999999 89999999999999


Q ss_pred             cCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCC
Q 025124          163 KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRD  228 (257)
Q Consensus       163 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~  228 (257)
                      +|++....  ..+.........+..+..+|+|+++.+.+++++...+++|..+.+|||..+..+.|
T Consensus       187 ~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~  250 (256)
T PRK12743        187 ATPMNGMD--DSDVKPDSRPGIPLGRPGDTHEIASLVAWLCSEGASYTTGQSLIVDGGFMLANPQF  250 (256)
T ss_pred             cCcccccc--ChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCcCCcEEEECCCccccCCcc
Confidence            99865321  22333334455677788999999999999999888999999999999987776444

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-32  Score=228.89  Aligned_cols=212  Identities=25%  Similarity=0.274  Sum_probs=178.7

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHH----HHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNG----FRTVI   76 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~----~~~~~   76 (257)
                      +|++++++++.+++   +.++.++++|++|.++++.+++++.+.++++|++|||||+.. ..++.+.+.++    |++++
T Consensus        37 ~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~  113 (263)
T PRK06200         37 ERSAEKLASLRQRF---GDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIF  113 (263)
T ss_pred             eCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHe
Confidence            57777777765554   456889999999999999999999999999999999999754 35666667665    88999


Q ss_pred             HHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEE
Q 025124           77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (257)
Q Consensus        77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~  156 (257)
                      ++|+.+++.++++++|.|.++         .|+||+++|..+..+.++...|+++|+|+++|+++++.|+. + +|+||+
T Consensus       114 ~~n~~~~~~~~~~~~~~~~~~---------~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~-~-~Irvn~  182 (263)
T PRK06200        114 NVNVKGYLLGAKAALPALKAS---------GGSMIFTLSNSSFYPGGGGPLYTASKHAVVGLVRQLAYELA-P-KIRVNG  182 (263)
T ss_pred             eeccHhHHHHHHHHHHHHHhc---------CCEEEEECChhhcCCCCCCchhHHHHHHHHHHHHHHHHHHh-c-CcEEEE
Confidence            999999999999999998764         58899999999998888889999999999999999999998 6 499999


Q ss_pred             EecCcccCCCCCCCC---------ChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCC-CCcccCcEEEecCCcccCCC
Q 025124          157 IAPGPIKDTAGVSKL---------APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA-GKYVNGNTLIVDGGNWLSNP  226 (257)
Q Consensus       157 v~Pg~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~-~~~~~G~~~~~dgg~~~~~~  226 (257)
                      |+||+++|++.....         ...+..+......|++++.+|+|+++.++||+++. +.+++|+.+.+|||+.+..+
T Consensus       183 i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s~~~~~~itG~~i~vdgG~~~~~~  262 (263)
T PRK06200        183 VAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPYVLLASRRNSRALTGVVINADGGLGIRGI  262 (263)
T ss_pred             EeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHHHHhhhhhheecccccCcccceEEEEcCceeeccc
Confidence            999999998753210         01122334455668889999999999999999988 89999999999999887765


Q ss_pred             C
Q 025124          227 R  227 (257)
Q Consensus       227 ~  227 (257)
                      +
T Consensus       263 ~  263 (263)
T PRK06200        263 R  263 (263)
T ss_pred             C
Confidence            3

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=4.2e-32  Score=223.47  Aligned_cols=207  Identities=33%  Similarity=0.461  Sum_probs=178.8

Q ss_pred             HHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHH
Q 025124            8 LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC   87 (257)
Q Consensus         8 l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~   87 (257)
                      .+++.+.+.+.+.++.++.+|+++.+++..+++++.+.++++|++|||+|.....++.+.+.++|++.+++|+.+++.++
T Consensus        40 ~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  119 (248)
T TIGR01832        40 PSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLT  119 (248)
T ss_pred             HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHH
Confidence            34556666666778999999999999999999999999999999999999877777888899999999999999999999


Q ss_pred             HHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCC
Q 025124           88 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG  167 (257)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~  167 (257)
                      +++++.|.+++.       .|+||++||..+..+.+....|+++|+++++++++++.|+. ++||++++|+||++.|++.
T Consensus       120 ~~~~~~~~~~~~-------~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~-~~gi~v~~v~pg~v~t~~~  191 (248)
T TIGR01832       120 QAAAKHFLKQGR-------GGKIINIASMLSFQGGIRVPSYTASKHGVAGLTKLLANEWA-AKGINVNAIAPGYMATNNT  191 (248)
T ss_pred             HHHHHHHHhcCC-------CeEEEEEecHHhccCCCCCchhHHHHHHHHHHHHHHHHHhC-ccCcEEEEEEECcCcCcch
Confidence            999999986531       47899999998888888889999999999999999999998 8999999999999999875


Q ss_pred             CCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          168 VSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      .................+.+++.+|+|+|+++++|+++.+.+++|+++.+|||+.
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~  246 (248)
T TIGR01832       192 QALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLASSASDYVNGYTLAVDGGWL  246 (248)
T ss_pred             hccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCcEEEeCCCEe
Confidence            4322222222334455677889999999999999999888999999999999965

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=7.9e-33  Score=224.55  Aligned_cols=190  Identities=24%  Similarity=0.234  Sum_probs=170.8

Q ss_pred             CCCcHHHHHHHHHHHHhc-CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      ++|++++|+++.++++.. +.+++++++|+++++++..+.+++.++.+.||++|||||+...+++.+.+.++.+.++++|
T Consensus        36 vaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN  115 (265)
T COG0300          36 VARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLN  115 (265)
T ss_pred             EeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHH
Confidence            589999999999999976 6789999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.+...++++++|.|.+++        .|.||||+|.++..|.|..+.|+++|+++.+|+++|+.|+. ++||+|.+|+|
T Consensus       116 ~~a~~~LT~~~lp~m~~~~--------~G~IiNI~S~ag~~p~p~~avY~ATKa~v~~fSeaL~~EL~-~~gV~V~~v~P  186 (265)
T COG0300         116 ILALTRLTKAVLPGMVERG--------AGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELK-GTGVKVTAVCP  186 (265)
T ss_pred             HHHHHHHHHHHHHHHHhcC--------CceEEEEechhhcCCCcchHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEEEec
Confidence            9999999999999999988        79999999999999999999999999999999999999999 99999999999


Q ss_pred             CcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccC
Q 025124          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (257)
Q Consensus       160 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  205 (257)
                      |.+.|++.......      .....+....++|+++|+..+..+..
T Consensus       187 G~~~T~f~~~~~~~------~~~~~~~~~~~~~~~va~~~~~~l~~  226 (265)
T COG0300         187 GPTRTEFFDAKGSD------VYLLSPGELVLSPEDVAEAALKALEK  226 (265)
T ss_pred             Cccccccccccccc------cccccchhhccCHHHHHHHHHHHHhc
Confidence            99999865411110      11111233468999999999999954

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-32  Score=224.57  Aligned_cols=213  Identities=31%  Similarity=0.431  Sum_probs=187.2

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.+.+.+.+.++.++++|+++.++++++++++.+.++++|++|||+|.....++.+.+.++|++++++|+.
T Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~  120 (265)
T PRK07097         41 DINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLN  120 (265)
T ss_pred             eCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhH
Confidence            57888888888888877778999999999999999999999999999999999999877778889999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.+++.++++|.++.        .|+||++||..+..+.+++..|+++|+++++|+++++.|+. +.||+|++|+||+
T Consensus       121 ~~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~-~~gi~v~~v~Pg~  191 (265)
T PRK07097        121 APFIVSKAVIPSMIKKG--------HGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYG-EANIQCNGIGPGY  191 (265)
T ss_pred             HHHHHHHHHHHHHHhcC--------CcEEEEEcCccccCCCCCCccHHHHHHHHHHHHHHHHHHhh-hcCceEEEEEecc
Confidence            99999999999998865        68999999998888888899999999999999999999999 8999999999999


Q ss_pred             ccCCCCCCCCC------hHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          162 IKDTAGVSKLA------PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       162 v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +.|++......      ............+..++.+|+|++..+.+++++.+.+++|+.+.+|||...
T Consensus       192 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~~~  259 (265)
T PRK07097        192 IATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVFLASDASNFVNGHILYVDGGILA  259 (265)
T ss_pred             ccccchhhhhhccccccchhHHHHHHhcCCccCCcCHHHHHHHHHHHhCcccCCCCCCEEEECCCcee
Confidence            99986533211      112222333455677889999999999999998888999999999999543

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-32  Score=225.07  Aligned_cols=211  Identities=24%  Similarity=0.276  Sum_probs=181.3

Q ss_pred             CCCcHHHHHHHHHHHHhc-CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      ++|++++++++.+++.+. +.++.++.+|++++++++.+++.    ++++|++|||+|.....++.+.+.++|+.++++|
T Consensus        37 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~----~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n  112 (259)
T PRK06125         37 VARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE----AGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELK  112 (259)
T ss_pred             EeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH----hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHh
Confidence            368888888888888765 56789999999999999888754    5899999999998777888999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.+++.++++++|.|.+++        .|+||++||..+..+.+.+..|+++|+|+++|+++++.|+. ++||+|++|+|
T Consensus       113 ~~~~~~~~~~~~~~~~~~~--------~g~iv~iss~~~~~~~~~~~~y~ask~al~~~~~~la~e~~-~~gi~v~~i~P  183 (259)
T PRK06125        113 VFGYIDLTRLAYPRMKARG--------SGVIVNVIGAAGENPDADYICGSAGNAALMAFTRALGGKSL-DDGVRVVGVNP  183 (259)
T ss_pred             hHHHHHHHHHHHHHHHHcC--------CcEEEEecCccccCCCCCchHhHHHHHHHHHHHHHHHHHhC-ccCeEEEEEec
Confidence            9999999999999998865        68999999999988888888999999999999999999998 89999999999


Q ss_pred             CcccCCCCCCCC--------ChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          160 GPIKDTAGVSKL--------APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       160 g~v~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      |+++|++....+        ...+....+....+.+++.+|+|+++.++||+++.+.+++|+.+.+|||..+.
T Consensus       184 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~vdgg~~~~  256 (259)
T PRK06125        184 GPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLVAFLASPRSGYTSGTVVTVDGGISAR  256 (259)
T ss_pred             CccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHHHHHcCchhccccCceEEecCCeeec
Confidence            999998643211        11222233444567788899999999999999988999999999999997654

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=3.5e-32  Score=225.38  Aligned_cols=200  Identities=25%  Similarity=0.418  Sum_probs=173.4

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      ++.++.||++|+++++++++++.++++++|++|||||.....++.+.+.++|+.++++|+.+++.++++++|+|.+++  
T Consensus        45 ~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--  122 (258)
T PRK06398         45 DVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD--  122 (258)
T ss_pred             ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--
Confidence            366789999999999999999999999999999999987778889999999999999999999999999999998865  


Q ss_pred             CCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCC------ChH
Q 025124          101 QASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL------APE  174 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~------~~~  174 (257)
                            .|+||++||..+..+.+++..|+++|+|+++|+++++.|+. +. |+||+|+||+++|++.....      ...
T Consensus       123 ------~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~~~~~la~e~~-~~-i~vn~i~PG~v~T~~~~~~~~~~~~~~~~  194 (258)
T PRK06398        123 ------KGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVDYA-PT-IRCVAVCPGSIRTPLLEWAAELEVGKDPE  194 (258)
T ss_pred             ------CeEEEEeCcchhccCCCCCchhhhhHHHHHHHHHHHHHHhC-CC-CEEEEEecCCccchHHhhhhhccccCChh
Confidence                  68999999999998889999999999999999999999997 65 99999999999998754321      111


Q ss_pred             HH---HHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCc
Q 025124          175 EI---RSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLP  230 (257)
Q Consensus       175 ~~---~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~  230 (257)
                      ..   ...+....+.+++.+|+|+++.++||+++.+.+++|+.+.+|||+....|.-.+
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~s~~~~~~~G~~i~~dgg~~~~~~~~~~  253 (258)
T PRK06398        195 HVERKIREWGEMHPMKRVGKPEEVAYVVAFLASDLASFITGECVTVDGGLRALIPLSTP  253 (258)
T ss_pred             hhHHHHHhhhhcCCcCCCcCHHHHHHHHHHHcCcccCCCCCcEEEECCccccCCCCCCC
Confidence            11   122234457788899999999999999998899999999999998776555544

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=7.9e-35  Score=216.66  Aligned_cols=208  Identities=25%  Similarity=0.312  Sum_probs=187.2

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|+++.|+.++++.-   +.+..+..|+++++.+...+..+    +.+|.+|||||+....+|.+++.++|++.|++|+
T Consensus        37 vaR~~a~L~sLV~e~p---~~I~Pi~~Dls~wea~~~~l~~v----~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNv  109 (245)
T KOG1207|consen   37 VARNEANLLSLVKETP---SLIIPIVGDLSAWEALFKLLVPV----FPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNV  109 (245)
T ss_pred             EecCHHHHHHHHhhCC---cceeeeEecccHHHHHHHhhccc----CchhhhhccchhhhcchHHHHhHHhhcceeeeee
Confidence            4688888888766543   34888999999988877766543    7899999999998889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      ++.+.+.|...+.+..+..       .|.|+++||..+..+..+...|+++|+|+++++++++.|++ +..||||.|.|-
T Consensus       110 ravi~v~Q~var~lv~R~~-------~GaIVNvSSqas~R~~~nHtvYcatKaALDmlTk~lAlELG-p~kIRVNsVNPT  181 (245)
T KOG1207|consen  110 RAVILVAQLVARNLVDRQI-------KGAIVNVSSQASIRPLDNHTVYCATKAALDMLTKCLALELG-PQKIRVNSVNPT  181 (245)
T ss_pred             eeeeeHHHHHHHhhhhccC-------CceEEEecchhcccccCCceEEeecHHHHHHHHHHHHHhhC-cceeEeeccCCe
Confidence            9999999997777776643       68899999999999999999999999999999999999999 999999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      .+.|.|....-++..-...+.+.+|+++|...+++..+++||+++.+++.+|.++.++||++.
T Consensus       182 VVmT~MG~dnWSDP~K~k~mL~riPl~rFaEV~eVVnA~lfLLSd~ssmttGstlpveGGfs~  244 (245)
T KOG1207|consen  182 VVMTDMGRDNWSDPDKKKKMLDRIPLKRFAEVDEVVNAVLFLLSDNSSMTTGSTLPVEGGFSN  244 (245)
T ss_pred             EEEecccccccCCchhccchhhhCchhhhhHHHHHHhhheeeeecCcCcccCceeeecCCccC
Confidence            999999988777777777888999999999999999999999999999999999999999874

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=1.1e-31  Score=221.97  Aligned_cols=209  Identities=30%  Similarity=0.460  Sum_probs=183.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.+.++.+.+++...+.++.++.+|+++.+++.++++.+.+.++++|++|||+|.....++ +.+.++|+..+++|+.
T Consensus        42 ~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~-~~~~~~~~~~~~~n~~  120 (255)
T PRK06113         42 DINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVF  120 (255)
T ss_pred             eCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhh
Confidence            578888888888887777789999999999999999999999999999999999997655554 6789999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.++++++++|.+.+        .++||++||..+..+.++...|+++|+|+++|+++++.++. +.||+++.|+||+
T Consensus       121 ~~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~-~~~i~v~~v~pg~  191 (255)
T PRK06113        121 SFFHLSQLVAPEMEKNG--------GGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLG-EKNIRVNGIAPGA  191 (255)
T ss_pred             hHHHHHHHHHHHHHhcC--------CcEEEEEecccccCCCCCcchhHHHHHHHHHHHHHHHHHhh-hhCeEEEEEeccc
Confidence            99999999999998755        67999999999998888899999999999999999999998 8999999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                      ++|++...... ...........+..++.+|+|+++++++|+++...+++|+.+.+|||.
T Consensus       192 ~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~i~~~gg~  250 (255)
T PRK06113        192 ILTDALKSVIT-PEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQILTVSGGG  250 (255)
T ss_pred             ccccccccccC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCc
Confidence            99987654332 233333445567778899999999999999988999999999999994

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.7e-32  Score=228.52  Aligned_cols=182  Identities=27%  Similarity=0.296  Sum_probs=156.4

Q ss_pred             HHHHHHHHHHHHHhCCccEEEeCCCCCC--CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceE
Q 025124           33 EDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGII  110 (257)
Q Consensus        33 ~~~~~~~~~~~~~~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~i  110 (257)
                      ++++.+++++.+++|++|++|||||...  ..++.+.+.++|++.+++|+.|++.++++++|+|++          .|+|
T Consensus       104 ~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~----------~G~i  173 (299)
T PRK06300        104 YTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNP----------GGST  173 (299)
T ss_pred             HHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc----------CCeE
Confidence            3589999999999999999999999643  468889999999999999999999999999999965          5789


Q ss_pred             EEEcccccccccccch-hhHHHHHHHHHHHHHHHHHhcCC-CCeEEEEEecCcccCCCCCCCCChHHHHHHhhhhccCCC
Q 025124          111 INISATLHYTATWYQI-HVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK  188 (257)
Q Consensus       111 i~iss~~~~~~~~~~~-~Y~~sK~a~~~l~~~la~e~~~~-~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  188 (257)
                      |+++|..+..+.+++. .|+++|+|+++|+++++.|+. + +|||||+|+||++.|++.......+...+......+.++
T Consensus       174 i~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~-~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r  252 (299)
T PRK06300        174 ISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAG-RRWGIRVNTISAGPLASRAGKAIGFIERMVDYYQDWAPLPE  252 (299)
T ss_pred             EEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEEeCCccChhhhcccccHHHHHHHHhcCCCCC
Confidence            9999999888888764 899999999999999999998 6 599999999999999875322112233333344567788


Q ss_pred             CCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCC
Q 025124          189 FGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSN  225 (257)
Q Consensus       189 ~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~  225 (257)
                      ..+|+|++..++||+++.+.+++|+++.+|||..+..
T Consensus       253 ~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~~  289 (299)
T PRK06300        253 PMEAEQVGAAAAFLVSPLASAITGETLYVDHGANVMG  289 (299)
T ss_pred             CcCHHHHHHHHHHHhCccccCCCCCEEEECCCcceec
Confidence            9999999999999999999999999999999987653

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.2e-31  Score=219.30  Aligned_cols=214  Identities=29%  Similarity=0.393  Sum_probs=188.0

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.++++..+.++.++.+|++|++++..+++++.+.++++|++|||+|.....++.+.+.++|+..+++|+.
T Consensus        36 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~  115 (250)
T PRK08063         36 ARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAK  115 (250)
T ss_pred             CCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhH
Confidence            57888888888888887888999999999999999999999999999999999999877788889999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.++++++++|.+++        .|+||++||..+..+.+....|+++|+++++|+++++.++. +.||++++|+||+
T Consensus       116 ~~~~~~~~~~~~~~~~~--------~g~iv~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~~~~~~~-~~~i~v~~i~pg~  186 (250)
T PRK08063        116 ALLFCAQEAAKLMEKVG--------GGKIISLSSLGSIRYLENYTTVGVSKAALEALTRYLAVELA-PKGIAVNAVSGGA  186 (250)
T ss_pred             HHHHHHHHHHHHHHhcC--------CeEEEEEcchhhccCCCCccHHHHHHHHHHHHHHHHHHHHh-HhCeEEEeEecCc
Confidence            99999999999998876        68999999998888888889999999999999999999998 8899999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      +.|++..................+.++..+++|+++.+++++++...+++|+.+.+|||..+.
T Consensus       187 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~~~~  249 (250)
T PRK08063        187 VDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFLCSPEADMIRGQTIIVDGGRSLL  249 (250)
T ss_pred             ccCchhhhccCchHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCeeee
Confidence            998875433222333333444556677899999999999999988888999999999997653

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.5e-31  Score=221.15  Aligned_cols=193  Identities=31%  Similarity=0.465  Sum_probs=168.8

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      ++.++.+|++|+++++++++++.+.++++|++|||+|+....++.+.+.++|+.++++|+.+++.+++.++|.|.+++  
T Consensus        52 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~--  129 (255)
T PRK06463         52 GVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK--  129 (255)
T ss_pred             CCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC--
Confidence            477899999999999999999999999999999999987667888889999999999999999999999999998765  


Q ss_pred             CCCCCCCceEEEEccccccc-ccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCCh---HHH
Q 025124          101 QASSSSGGIIINISATLHYT-ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP---EEI  176 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~-~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~---~~~  176 (257)
                            .|+||++||..+.. +.++...|+++|+|+++|+++++.|+. ++||+|++|+||+++|++.......   ...
T Consensus       130 ------~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~  202 (255)
T PRK06463        130 ------NGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTRRLAFELG-KYGIRVNAVAPGWVETDMTLSGKSQEEAEKL  202 (255)
T ss_pred             ------CcEEEEEcCHHhCCCCCCCccHhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCCCCCchhhcccCccchHHH
Confidence                  68999999988764 345778899999999999999999998 8999999999999999876432221   123


Q ss_pred             HHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          177 RSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       177 ~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      ...+....+.+++.+|+|+++.+++|+++.+.+++|+.+.+|||..
T Consensus       203 ~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg~~  248 (255)
T PRK06463        203 RELFRNKTVLKTTGKPEDIANIVLFLASDDARYITGQVIVADGGRI  248 (255)
T ss_pred             HHHHHhCCCcCCCcCHHHHHHHHHHHcChhhcCCCCCEEEECCCee
Confidence            3344556677888999999999999999888999999999999964

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.2e-31  Score=243.03  Aligned_cols=209  Identities=30%  Similarity=0.402  Sum_probs=181.3

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHHHh
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~   80 (257)
                      +|++++++++.+++   +.++..+.+|++|+++++.+++++.+++|++|++|||||... ..++.+.+.++|++++++|+
T Consensus       300 ~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~  376 (520)
T PRK06484        300 DRDAEGAKKLAEAL---GDEHLSVQADITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNL  376 (520)
T ss_pred             eCCHHHHHHHHHHh---CCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCc
Confidence            67888887776554   457888999999999999999999999999999999999764 36788899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .++++++++++|+|.  +        .|+||++||.++..+.++++.|+++|+++++|+++++.|+. ++||+||+|+||
T Consensus       377 ~~~~~~~~~~~~~~~--~--------~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~-~~gI~vn~v~PG  445 (520)
T PRK06484        377 SGAFACARAAARLMS--Q--------GGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWA-PAGIRVNTVAPG  445 (520)
T ss_pred             HHHHHHHHHHHHHhc--c--------CCEEEEECchhhcCCCCCCchhHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEeC
Confidence            999999999999993  2        68999999999999999999999999999999999999999 899999999999


Q ss_pred             cccCCCCCCCCC-hHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          161 PIKDTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       161 ~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      +++|++...... .......+....+.+++.+|+|+|+.++||+++.+.+++|+.+.+|||+...
T Consensus       446 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~s~~~~~~~G~~i~vdgg~~~~  510 (520)
T PRK06484        446 YIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPAASYVNGATLTVDGGWTAF  510 (520)
T ss_pred             CccCchhhhhccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEECCCccCC
Confidence            999987543221 1222334445667788899999999999999988899999999999997544

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-31  Score=219.92  Aligned_cols=213  Identities=24%  Similarity=0.339  Sum_probs=181.4

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.+ ..+..+++...+.++.++.+|+++.++++++++++.++++++|++|||+|.....++.+.+.+++++.+++|+.
T Consensus        37 ~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~  115 (263)
T PRK08226         37 DISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIK  115 (263)
T ss_pred             cCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhH
Confidence            56654 44555666655678889999999999999999999999999999999999877788888999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccc-ccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH-YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~-~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      +++.+.+.++++|.+..        .++||++||..+ ..+.+++..|+++|+++++++++++.++. +.||+|++|+||
T Consensus       116 ~~~~~~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~-~~~i~v~~i~pg  186 (263)
T PRK08226        116 GVWNVTKAVLPEMIARK--------DGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYA-QSGIRVNAICPG  186 (263)
T ss_pred             HHHHHHHHHHHHHHhcC--------CcEEEEECcHHhcccCCCCcchHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEecC
Confidence            99999999999998765        688999999877 45667788999999999999999999998 889999999999


Q ss_pred             cccCCCCCCCC------ChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          161 PIKDTAGVSKL------APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       161 ~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      +++|++.....      ........+....|++++.+|+|+++.++||+++.+.+++|+.+.+|||+++.
T Consensus       187 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~dgg~~~~  256 (263)
T PRK08226        187 YVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDESSYLTGTQNVIDGGSTLP  256 (263)
T ss_pred             cccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCchhcCCcCceEeECCCcccC
Confidence            99998753211      11233344455667888899999999999999988899999999999997643

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-31  Score=227.45  Aligned_cols=202  Identities=21%  Similarity=0.207  Sum_probs=164.8

Q ss_pred             HHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCC-CCCC----CCCCCCCCHHHHHHHHHHH
Q 025124            5 KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA-AGNF----LVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         5 ~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~a-g~~~----~~~~~~~~~~~~~~~~~~n   79 (257)
                      +++++++.+++.+.+.++.++.||++++++++.+++++.+++|+||++|||| |...    ..++.+.+.++|++.+++|
T Consensus        52 ~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n  131 (305)
T PRK08303         52 PETIEETAELVTAAGGRGIAVQVDHLVPEQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLA  131 (305)
T ss_pred             cchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHh
Confidence            3567778888877777888999999999999999999999999999999999 7431    2567788999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccc---ccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEE
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT---ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~---~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~  156 (257)
                      +.+++.++++++|+|.+++        .|+||++||..+..   +.++...|+++|+|+.+|+++|+.|+. ++|||||+
T Consensus       132 ~~~~~~~~~~~lp~m~~~~--------~g~IV~isS~~~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~-~~gIrVn~  202 (305)
T PRK08303        132 IDTHLITSHFALPLLIRRP--------GGLVVEITDGTAEYNATHYRLSVFYDLAKTSVNRLAFSLAHELA-PHGATAVA  202 (305)
T ss_pred             hHHHHHHHHHHHHHhhhCC--------CcEEEEECCccccccCcCCCCcchhHHHHHHHHHHHHHHHHHhh-hcCcEEEE
Confidence            9999999999999998765        68999999976543   234567899999999999999999999 89999999


Q ss_pred             EecCcccCCCCCCCC--ChHHHHHHhhhhcc-CCCCCCHHhHHHHHHHhccCCC-CcccCcEEE
Q 025124          157 IAPGPIKDTAGVSKL--APEEIRSKATDYMA-AYKFGEKWDIAMAALYLASDAG-KYVNGNTLI  216 (257)
Q Consensus       157 v~Pg~v~t~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~dva~~~~~l~~~~~-~~~~G~~~~  216 (257)
                      |+||+++|++.....  ....... .....+ ..+..+|+|+++.++||+++.. .+++|+.+.
T Consensus       203 v~PG~v~T~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~peevA~~v~fL~s~~~~~~itG~~l~  265 (305)
T PRK08303        203 LTPGWLRSEMMLDAFGVTEENWRD-ALAKEPHFAISETPRYVGRAVAALAADPDVARWNGQSLS  265 (305)
T ss_pred             ecCCccccHHHHHhhccCccchhh-hhccccccccCCCHHHHHHHHHHHHcCcchhhcCCcEEE
Confidence            999999998743211  1111111 112234 4566789999999999999874 589999876

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-31  Score=217.48  Aligned_cols=197  Identities=29%  Similarity=0.414  Sum_probs=172.2

Q ss_pred             CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Q 025124           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (257)
Q Consensus        19 ~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (257)
                      +.++.++++|++++++++++++++.+.++++|++|||||......+.+.+.++|++.+++|+.+++.+++++.+.|.++.
T Consensus        46 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  125 (252)
T PRK07856         46 GRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQP  125 (252)
T ss_pred             CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence            45688899999999999999999999999999999999987777788889999999999999999999999999998753


Q ss_pred             CCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHHH
Q 025124           99 RGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS  178 (257)
Q Consensus        99 ~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~  178 (257)
                      .       .|+||++||..+..+.+++..|+++|+++++|+++++.|+. ++ |++++|+||+++|++........+...
T Consensus       126 ~-------~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~-i~v~~i~Pg~v~t~~~~~~~~~~~~~~  196 (252)
T PRK07856        126 G-------GGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTRSLAVEWA-PK-VRVNAVVVGLVRTEQSELHYGDAEGIA  196 (252)
T ss_pred             C-------CcEEEEEcccccCCCCCCCchhHHHHHHHHHHHHHHHHHhc-CC-eEEEEEEeccccChHHhhhccCHHHHH
Confidence            1       58999999999999999999999999999999999999998 76 999999999999987543322233333


Q ss_pred             HhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          179 KATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       179 ~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      ......+.+++.+|+|+++.+++|+++.+++++|+.+.+|||....
T Consensus       197 ~~~~~~~~~~~~~p~~va~~~~~L~~~~~~~i~G~~i~vdgg~~~~  242 (252)
T PRK07856        197 AVAATVPLGRLATPADIAWACLFLASDLASYVSGANLEVHGGGERP  242 (252)
T ss_pred             HHhhcCCCCCCcCHHHHHHHHHHHcCcccCCccCCEEEECCCcchH
Confidence            4455667788999999999999999988899999999999996543

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-30  Score=215.61  Aligned_cols=219  Identities=27%  Similarity=0.371  Sum_probs=188.2

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|+.++++++.+++...+.++.++.+|+++.++++++++++.+.++++|++|||+|.....++.+.+.++|+.++++|+
T Consensus        39 ~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~  118 (258)
T PRK06949         39 ASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNT  118 (258)
T ss_pred             EeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcc
Confidence            36888899988888877777899999999999999999999999999999999999987777788889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .+++.+++++++.|.++..+.......|++|+++|..+..+.+....|+++|++++.++++++.++. ++||++++|+||
T Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~-~~~i~v~~v~pG  197 (258)
T PRK06949        119 RGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLYCMSKAAVVHMTRAMALEWG-RHGINVNAICPG  197 (258)
T ss_pred             hhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCccHHHHHHHHHHHHHHHHHHHHH-hcCeEEEEEeeC
Confidence            9999999999999987643221112247999999999888888889999999999999999999998 889999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                      +++|++...... .+.........+..+...|+|+++.+.||+++.+++++|+.+.+|||+
T Consensus       198 ~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~G~~i~~dgg~  257 (258)
T PRK06949        198 YIDTEINHHHWE-TEQGQKLVSMLPRKRVGKPEDLDGLLLLLAADESQFINGAIISADDGF  257 (258)
T ss_pred             CCcCCcchhccC-hHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcCCCCcEEEeCCCC
Confidence            999987643322 222234455567788999999999999999999999999999999985

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=8.9e-31  Score=216.75  Aligned_cols=211  Identities=30%  Similarity=0.425  Sum_probs=181.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.+++   +.++.++.+|++|+++++.+++++.+.++++|++|||+|.....++.+.+.++|+..+++|+.
T Consensus        37 ~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~  113 (257)
T PRK07067         37 DIKPARARLAALEI---GPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVK  113 (257)
T ss_pred             cCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhh
Confidence            57777777766655   346889999999999999999999999999999999999877778888999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.+++++++.|.++..       .|+||++||..+..+.++...|+++|++++.|+++++.|+. ++||++++|+||+
T Consensus       114 ~~~~l~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~i~pg~  185 (257)
T PRK07067        114 GLFFLMQAVARHMVEQGR-------GGKIINMASQAGRRGEALVSHYCATKAAVISYTQSAALALI-RHGINVNAIAPGV  185 (257)
T ss_pred             hHHHHHHHHHHHHHhcCC-------CcEEEEeCCHHhCCCCCCCchhhhhHHHHHHHHHHHHHHhc-ccCeEEEEEeeCc
Confidence            999999999999987531       47899999998888888999999999999999999999998 8999999999999


Q ss_pred             ccCCCCCCC---------CChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          162 IKDTAGVSK---------LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       162 v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ++|++....         ....+......+..+++++.+|+|+|+++++|+++.+.+++|+++.+|||..+
T Consensus       186 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~~~  256 (257)
T PRK07067        186 VDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLASADADYIVAQTYNVDGGNWM  256 (257)
T ss_pred             ccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHHHhCcccccccCcEEeecCCEeC
Confidence            999864321         01122233344566788999999999999999999899999999999999653

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1.7e-30  Score=213.62  Aligned_cols=210  Identities=22%  Similarity=0.299  Sum_probs=183.4

Q ss_pred             CcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHH
Q 025124            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG   82 (257)
Q Consensus         3 r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~   82 (257)
                      |+.++.++..+++...+.++..+.+|++|.++++++++++.+.++++|++|||+|.....++.+.+.++|++++++|+.+
T Consensus        36 ~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~  115 (246)
T PRK12938         36 PNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTS  115 (246)
T ss_pred             CChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHH
Confidence            45566667777777777788899999999999999999999999999999999998776778889999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcc
Q 025124           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (257)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v  162 (257)
                      ++.+++++++.|.+++        .++||++||..+..+.+++..|+++|+++++|+++++.|+. +.||++++|+||++
T Consensus       116 ~~~~~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~~~~-~~gi~v~~i~pg~~  186 (246)
T PRK12938        116 LFNVTKQVIDGMVERG--------WGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVA-TKGVTVNTVSPGYI  186 (246)
T ss_pred             HHHHHHHHHHHHHHcC--------CeEEEEEechhccCCCCCChhHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEeccc
Confidence            9999999999998765        68999999999888888999999999999999999999998 89999999999999


Q ss_pred             cCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          163 KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       163 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      .|++.... . .+..+......+..++.+++++++.+.+|+++...+++|+.+.+|||..+
T Consensus       187 ~t~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~g~~~~~~~g~~~  245 (246)
T PRK12938        187 GTDMVKAI-R-PDVLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTGADFSLNGGLHM  245 (246)
T ss_pred             CCchhhhc-C-hHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCccCcEEEECCcccC
Confidence            99865432 1 23333344455677789999999999999999889999999999999643

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=5.6e-31  Score=220.65  Aligned_cols=214  Identities=25%  Similarity=0.308  Sum_probs=176.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC--CCCCCCCHHHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL--VPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n   79 (257)
                      +|+.+.++++.+++.. +.++.++++|++|.++++++++++.++++++|++|||||....  ..+.+.+.++|+.++++|
T Consensus        49 ~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N  127 (280)
T PLN02253         49 DLQDDLGQNVCDSLGG-EPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVN  127 (280)
T ss_pred             eCCHHHHHHHHHHhcC-CCceEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHh
Confidence            5666677777666632 4578999999999999999999999999999999999997542  467888999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.+++++++++++.|.++.        .|+|++++|..+..+.++...|+++|+|+++|+++++.|+. ++||+|++|+|
T Consensus       128 ~~g~~~~~~~~~~~~~~~~--------~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~i~p  198 (280)
T PLN02253        128 VKGVFLGMKHAARIMIPLK--------KGSIVSLCSVASAIGGLGPHAYTGSKHAVLGLTRSVAAELG-KHGIRVNCVSP  198 (280)
T ss_pred             hHHHHHHHHHHHHHHHhcC--------CceEEEecChhhcccCCCCcccHHHHHHHHHHHHHHHHHhh-hcCeEEEEEee
Confidence            9999999999999998765        68999999999988888888999999999999999999999 88999999999


Q ss_pred             CcccCCCCCCCCChH----HHHH----HhhhhccC-CCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCC
Q 025124          160 GPIKDTAGVSKLAPE----EIRS----KATDYMAA-YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSN  225 (257)
Q Consensus       160 g~v~t~~~~~~~~~~----~~~~----~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~  225 (257)
                      |+++|++........    ....    ......++ ++..+|+|+++++++|+++.+.+++|+.+.+|||.....
T Consensus       199 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdgG~~~~~  273 (280)
T PLN02253        199 YAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAVLFLASDEARYISGLNLMIDGGFTCTN  273 (280)
T ss_pred             CcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHHHHHHHHHhhcCcccccccCcEEEECCchhhcc
Confidence            999998643222111    1111    11112222 445799999999999999989999999999999976543

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=1.4e-30  Score=213.17  Aligned_cols=207  Identities=27%  Similarity=0.287  Sum_probs=180.3

Q ss_pred             CcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHH
Q 025124            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG   82 (257)
Q Consensus         3 r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~   82 (257)
                      ++.++++.+.+++.+.+.++.++.+|++|.+++..+++++.+.++++|++|||+|.....++.+.+.++|+.++++|+.+
T Consensus        31 ~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~  110 (239)
T TIGR01831        31 SGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDG  110 (239)
T ss_pred             CCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHH
Confidence            34567788888888777889999999999999999999999999999999999998777778888999999999999999


Q ss_pred             HHHHHHHHH-HHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           83 TFIMCHEAL-KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        83 ~~~l~~~~~-~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      ++.+.+.++ |.+.++.        .|+||++||..+..+.++...|+++|+++++++++++.|+. ++||+++.|+||+
T Consensus       111 ~~~l~~~~~~~~~~~~~--------~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~  181 (239)
T TIGR01831       111 FYNVIHPCTMPMIRARQ--------GGRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALAVELA-KRKITVNCIAPGL  181 (239)
T ss_pred             HHHHHHHHHHHHHhhcC--------CeEEEEEcchhhccCCCCCcchHHHHHHHHHHHHHHHHHHh-HhCeEEEEEEEcc
Confidence            999999886 4444444        68999999999999999999999999999999999999998 8899999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                      ++|++....   .+.........|++++.+|+|+++.++||+++.+.+++|..+.+|||.
T Consensus       182 v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg~  238 (239)
T TIGR01831       182 IDTEMLAEV---EHDLDEALKTVPMNRMGQPAEVASLAGFLMSDGASYVTRQVISVNGGM  238 (239)
T ss_pred             Cccccchhh---hHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCccCCEEEecCCc
Confidence            999876432   111223344567888999999999999999999999999999999985

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-30  Score=215.52  Aligned_cols=209  Identities=36%  Similarity=0.542  Sum_probs=178.7

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.+. .+..+++.  +.++.++.+|++++++++.+++++.+.++++|++|||+|.....++.+.+.++|+..+++|+.
T Consensus        46 ~r~~~~-~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~  122 (255)
T PRK06841         46 DRSEDV-AEVAAQLL--GGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLK  122 (255)
T ss_pred             eCCHHH-HHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcH
Confidence            455543 23333332  346778999999999999999999999999999999999877777888899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.+++.+.+.|.++.        .++||++||..+..+.+.+..|+++|+++++|+++++.|+. ++||++++|+||+
T Consensus       123 ~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~pg~  193 (255)
T PRK06841        123 GSFLMAQAVGRHMIAAG--------GGKIVNLASQAGVVALERHVAYCASKAGVVGMTKVLALEWG-PYGITVNAISPTV  193 (255)
T ss_pred             HHHHHHHHHHHHHHhcC--------CceEEEEcchhhccCCCCCchHHHHHHHHHHHHHHHHHHHH-hhCeEEEEEEeCc
Confidence            99999999999998866        68999999999988999999999999999999999999998 8899999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ++|++...... ...........+.+++.+|+|+++.+++|+++.+.+++|+.+.+|||+.+
T Consensus       194 v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~~dgg~~~  254 (255)
T PRK06841        194 VLTELGKKAWA-GEKGERAKKLIPAGRFAYPEEIAAAALFLASDAAAMITGENLVIDGGYTI  254 (255)
T ss_pred             CcCcccccccc-hhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCccC
Confidence            99987543322 22223344566788899999999999999999999999999999999754

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-30  Score=216.66  Aligned_cols=214  Identities=41%  Similarity=0.614  Sum_probs=183.0

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|+.+++++..+++.+.+.+++++.+|++++++++++++++.+.++++|++|||+|.....++.+.+.++|+..+++|+
T Consensus        39 ~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~  118 (264)
T PRK07576         39 ASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDL  118 (264)
T ss_pred             EeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHh
Confidence            36888888888888877777788999999999999999999999999999999999976667788899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .+++.+++++++.|.++         +|+|+++||..+..+.+++..|+++|+++++|+++++.|+. ++||+++.|+||
T Consensus       119 ~g~~~l~~~~~~~l~~~---------~g~iv~iss~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~-~~gi~v~~v~pg  188 (264)
T PRK07576        119 LGTFNVLKAAYPLLRRP---------GASIIQISAPQAFVPMPMQAHVCAAKAGVDMLTRTLALEWG-PEGIRVNSIVPG  188 (264)
T ss_pred             HHHHHHHHHHHHHHHhC---------CCEEEEECChhhccCCCCccHHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecc
Confidence            99999999999998754         57899999998888888999999999999999999999998 889999999999


Q ss_pred             cccC-CCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          161 PIKD-TAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       161 ~v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      .+++ +...................+.++..+|+|+++.+++++++...+++|+.+.+|||..+.
T Consensus       189 ~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~~gg~~~~  253 (264)
T PRK07576        189 PIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANAALFLASDMASYITGVVLPVDGGWSLG  253 (264)
T ss_pred             cccCcHHHhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCccCCEEEECCCcccC
Confidence            9974 322222222222233334456778899999999999999988889999999999997544

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-30  Score=215.76  Aligned_cols=208  Identities=28%  Similarity=0.452  Sum_probs=174.1

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC-CCCCCCCCCHHHHHHHHHHHh
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      +|+. .++++.+++...+.++.++.+|+++.+++.++++++.++++++|++|||||.. ...++.+.+.++|+..+++|+
T Consensus        39 ~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~  117 (260)
T PRK12823         39 DRSE-LVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSL  117 (260)
T ss_pred             eCch-HHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHh
Confidence            4654 35566777776677889999999999999999999999999999999999964 357788899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .+++.+++.++|+|.+++        .|+||++||..+..  .....|+++|+|+++|+++++.|+. ++||++++|+||
T Consensus       118 ~~~~~~~~~~~~~~~~~~--------~g~iv~~sS~~~~~--~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg  186 (260)
T PRK12823        118 FPTLWCCRAVLPHMLAQG--------GGAIVNVSSIATRG--INRVPYSAAKGGVNALTASLAFEYA-EHGIRVNAVAPG  186 (260)
T ss_pred             HHHHHHHHHHHHHHHhcC--------CCeEEEEcCccccC--CCCCccHHHHHHHHHHHHHHHHHhc-ccCcEEEEEecC
Confidence            999999999999998865        68999999987642  3456899999999999999999998 889999999999


Q ss_pred             cccCCCCCCC-----C------ChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          161 PIKDTAGVSK-----L------APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       161 ~v~t~~~~~~-----~------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                      +++|++....     .      .............++.++.+|+|+++++++|+++.+.+++|+.+.+|||.
T Consensus       187 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        187 GTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQVAAILFLASDEASYITGTVLPVGGGD  258 (260)
T ss_pred             ccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCHHHHHHHHHHHcCcccccccCcEEeecCCC
Confidence            9999852110     0      01122233344567788899999999999999988889999999999985

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2e-31  Score=217.97  Aligned_cols=202  Identities=28%  Similarity=0.328  Sum_probs=163.4

Q ss_pred             CCCcHHHHHHHHHHHHhcC-C-CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLG-I-PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI   78 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~-~-~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~   78 (257)
                      ++|+..+++++.+++++.+ . ++++++||++|.++++.+++++..+||++|+||||||+.....+.+.+.+++...+++
T Consensus        42 var~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdt  121 (282)
T KOG1205|consen   42 VARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDT  121 (282)
T ss_pred             eehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhh
Confidence            4688899999989998873 3 4999999999999999999999999999999999999888888888999999999999


Q ss_pred             HhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCC--eEEEE
Q 025124           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA--IRVNG  156 (257)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~g--i~v~~  156 (257)
                      |++|++.++++++|.|++++        .|+||+++|.+++.+.|..+.|++||+|+.+|+.+|++|+. +.+  |++ .
T Consensus       122 N~~G~V~~Tk~alp~m~~r~--------~GhIVvisSiaG~~~~P~~~~Y~ASK~Al~~f~etLR~El~-~~~~~i~i-~  191 (282)
T KOG1205|consen  122 NVFGTVYLTKAALPSMKKRN--------DGHIVVISSIAGKMPLPFRSIYSASKHALEGFFETLRQELI-PLGTIIII-L  191 (282)
T ss_pred             hchhhHHHHHHHHHHhhhcC--------CCeEEEEeccccccCCCcccccchHHHHHHHHHHHHHHHhh-ccCceEEE-E
Confidence            99999999999999999987        69999999999999999999999999999999999999998 766  566 9


Q ss_pred             EecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHH--HHHHhccCCCCcccCcEEEec
Q 025124          157 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM--AALYLASDAGKYVNGNTLIVD  218 (257)
Q Consensus       157 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~--~~~~l~~~~~~~~~G~~~~~d  218 (257)
                      |+||+|+|++...........      ........+++++.  .+.+.+..+....-...+...
T Consensus       192 V~PG~V~Te~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p  249 (282)
T KOG1205|consen  192 VSPGPIETEFTGKELLGEEGK------SQQGPFLRTEDVADPEAVAYAISTPPCRQVEDIIIAP  249 (282)
T ss_pred             EecCceeecccchhhcccccc------ccccchhhhhhhhhHHHHHHHHhcCcccchhheeecc
Confidence            999999998654433221110      11122344555544  666666544443333333333

>TIGR02415 23BDH acetoin reductases

Probab=99.98  E-value=1.8e-30  Score=214.44  Aligned_cols=214  Identities=23%  Similarity=0.320  Sum_probs=186.2

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.+++.+.+.++.++.+|++|++++.++++++.++++++|++|||+|.....++.+.+.++|++.+++|+.
T Consensus        31 ~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~  110 (254)
T TIGR02415        31 DLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVK  110 (254)
T ss_pred             eCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhH
Confidence            57778888888888877778999999999999999999999999999999999999877778889999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.+++.+++.|.+++.       .+++|++||..+..+.+.++.|+++|+++++|+++++.|+. +.||+++.|+||+
T Consensus       111 ~~~~~~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~Pg~  182 (254)
T TIGR02415       111 GVLFGIQAAARQFKKQGH-------GGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELA-PKGITVNAYCPGI  182 (254)
T ss_pred             HHHHHHHHHHHHHHhCCC-------CeEEEEecchhhcCCCCCCcchHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecCc
Confidence            999999999999988641       47999999999999999999999999999999999999998 8899999999999


Q ss_pred             ccCCCCCCCCCh---------HHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          162 IKDTAGVSKLAP---------EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       162 v~t~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ++|++.......         ......+....+.+++.+|+|+++++.+|+++...+++|+.+.+|||+.+
T Consensus       183 i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g~~~  253 (254)
T TIGR02415       183 VKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLASEDSDYITGQSILVDGGMVY  253 (254)
T ss_pred             ccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHhhcccccCCccCcEEEecCCccC
Confidence            998864321110         11123334456677899999999999999999888999999999999643

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.98  E-value=4.4e-31  Score=219.22  Aligned_cols=209  Identities=25%  Similarity=0.325  Sum_probs=170.7

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCH----HHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSP----NGFRTVI   76 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~-~~~~~~~~----~~~~~~~   76 (257)
                      +|+.++++++.+.   .+.++.++.+|+++.++++.+++++.++++++|++|||||+... .++.+.+.    ++|++.+
T Consensus        36 ~r~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~  112 (262)
T TIGR03325        36 DKSAAGLQELEAA---HGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVF  112 (262)
T ss_pred             eCCHHHHHHHHhh---cCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhh
Confidence            5777766665432   24578899999999999999999999999999999999997532 34444443    5799999


Q ss_pred             HHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEE
Q 025124           77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (257)
Q Consensus        77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~  156 (257)
                      ++|+.+++.++++++|.|.+.         +|++|+++|..+..+.++...|+++|+|+++|+++++.|+. ++ |+||+
T Consensus       113 ~~N~~~~~~l~~~~~~~~~~~---------~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~-~~-irvn~  181 (262)
T TIGR03325       113 HINVKGYLLAVKAALPALVAS---------RGSVIFTISNAGFYPNGGGPLYTAAKHAVVGLVKELAFELA-PY-VRVNG  181 (262)
T ss_pred             eeecHhHHHHHHHHHHHHhhc---------CCCEEEEeccceecCCCCCchhHHHHHHHHHHHHHHHHhhc-cC-eEEEE
Confidence            999999999999999999764         47799999999888888888999999999999999999998 76 99999


Q ss_pred             EecCcccCCCCCCCC---ChH-----HHHHHhhhhccCCCCCCHHhHHHHHHHhccCC-CCcccCcEEEecCCcccC
Q 025124          157 IAPGPIKDTAGVSKL---APE-----EIRSKATDYMAAYKFGEKWDIAMAALYLASDA-GKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       157 v~Pg~v~t~~~~~~~---~~~-----~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~-~~~~~G~~~~~dgg~~~~  224 (257)
                      |+||++.|++.....   ...     ...+......|++++.+|+|+++.++||+++. +.+++|+.+.+|||+.+.
T Consensus       182 i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~~~~~~tG~~i~vdgg~~~~  258 (262)
T TIGR03325       182 VAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYVFFATRGDTVPATGAVLNYDGGMGVR  258 (262)
T ss_pred             EecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChHHhhhheeeeecCCCcccccceEEEecCCeeec
Confidence            999999998753211   110     11222334567889999999999999999874 578999999999997654

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.98  E-value=5.9e-30  Score=211.11  Aligned_cols=207  Identities=30%  Similarity=0.402  Sum_probs=174.5

Q ss_pred             CcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC-ccEEEeCCCCCC------CCCCCCCCHHHHHHH
Q 025124            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK-LDILVNAAAGNF------LVPAEDLSPNGFRTV   75 (257)
Q Consensus         3 r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~-id~li~~ag~~~------~~~~~~~~~~~~~~~   75 (257)
                      |+.++++.+..++   +.++.++.+|++++++++.+++++.+.+++ +|++|||||...      ..++.+.+.++|++.
T Consensus        38 ~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~  114 (253)
T PRK08642         38 QSEDAAEALADEL---GDRAIALQADVTDREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQ  114 (253)
T ss_pred             CCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHH
Confidence            3455555544433   357889999999999999999999999987 999999998632      245778899999999


Q ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEE
Q 025124           76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN  155 (257)
Q Consensus        76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~  155 (257)
                      +++|+.+++.+++++++.|.+..        .|+|++++|..+..+..++..|+++|+++++|+++++.++. ++||++|
T Consensus       115 ~~~n~~~~~~l~~~~~~~~~~~~--------~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~-~~~i~v~  185 (253)
T PRK08642        115 LEGSVKGALNTIQAALPGMREQG--------FGRIINIGTNLFQNPVVPYHDYTTAKAALLGLTRNLAAELG-PYGITVN  185 (253)
T ss_pred             HhhhhhHHHHHHHHHHHHHHhcC--------CeEEEEECCccccCCCCCccchHHHHHHHHHHHHHHHHHhC-ccCeEEE
Confidence            99999999999999999998765        68999999987777777788999999999999999999999 8999999


Q ss_pred             EEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          156 GIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       156 ~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      +|+||+++|++..... .++.........+.+++.+|+|+++.+.+|+++.+.+++|+.+.+|||+.
T Consensus       186 ~i~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~vdgg~~  251 (253)
T PRK08642        186 MVSGGLLRTTDASAAT-PDEVFDLIAATTPLRKVTTPQEFADAVLFFASPWARAVTGQNLVVDGGLV  251 (253)
T ss_pred             EEeecccCCchhhccC-CHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCchhcCccCCEEEeCCCee
Confidence            9999999987543322 23334445556678889999999999999999988999999999999953

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.97  E-value=4.6e-30  Score=212.67  Aligned_cols=215  Identities=22%  Similarity=0.285  Sum_probs=183.0

Q ss_pred             CCCcHHHHHHHHHHHHhcC--CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI   78 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~--~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~   78 (257)
                      ++|+.+.++++.+.+.+..  .+++++.+|+++.+++.++++++.+.++++|++|||+|.....++.+.+.++|+..+++
T Consensus        32 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~  111 (259)
T PRK12384         32 ADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQV  111 (259)
T ss_pred             EECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHh
Confidence            3678888888888776542  46899999999999999999999999999999999999877788889999999999999


Q ss_pred             HhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      |+.+++.+.+++++.|.+++.       .++||++||..+..+.+....|+++|+|+++|+++++.|+. ++||+|++|+
T Consensus       112 n~~~~~~l~~~~~~~l~~~~~-------~~~iv~~ss~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~-~~gi~v~~v~  183 (259)
T PRK12384        112 NLVGYFLCAREFSRLMIRDGI-------QGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLA-EYGITVHSLM  183 (259)
T ss_pred             ccHHHHHHHHHHHHHHHhCCC-------CcEEEEecCcccccCCCCCchhHHHHHHHHHHHHHHHHHHH-HcCcEEEEEe
Confidence            999999999999999987531       37899999998888888889999999999999999999998 8999999999


Q ss_pred             cCcc-cCCCCCCCC---------ChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          159 PGPI-KDTAGVSKL---------APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       159 Pg~v-~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ||.+ .|++.....         ..++....+.+..+++++.+++|+++++++|+++...+++|+++.+|||..+
T Consensus       184 pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g~~~  258 (259)
T PRK12384        184 LGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGGQVM  258 (259)
T ss_pred             cCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHcCcccccccCceEEEcCCEEe
Confidence            9976 444332111         1233344455567888999999999999999998888899999999999754

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.97  E-value=7.8e-30  Score=209.96  Aligned_cols=212  Identities=31%  Similarity=0.339  Sum_probs=188.0

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|++++++++.+++.+.+.++.++.+|+++.++++++++++.+.++++|++|||+|......+.+.+.++++..+++|+.
T Consensus        38 ~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~  117 (250)
T PRK12939         38 DGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVR  117 (250)
T ss_pred             eCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhH
Confidence            67888888888888777778999999999999999999999999999999999999877777888899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.+++.+.+.|.+++        .|++|++||..+..+.+..+.|+++|++++++++.++.++. +++|+++.|+||+
T Consensus       118 ~~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~y~~sK~~~~~~~~~l~~~~~-~~~i~v~~v~pg~  188 (250)
T PRK12939        118 GTFLMLRAALPHLRDSG--------RGRIVNLASDTALWGAPKLGAYVASKGAVIGMTRSLARELG-GRGITVNAIAPGL  188 (250)
T ss_pred             HHHHHHHHHHHHHHHcC--------CeEEEEECchhhccCCCCcchHHHHHHHHHHHHHHHHHHHh-hhCEEEEEEEECC
Confidence            99999999999998866        68999999999988888889999999999999999999998 8899999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ++|++...... ......+....+..++.+++|+++.+++++++...+++|+.+.+|||+.+
T Consensus       189 v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg~~~  249 (250)
T PRK12939        189 TATEATAYVPA-DERHAYYLKGRALERLQVPDDVAGAVLFLLSDAARFVTGQLLPVNGGFVM  249 (250)
T ss_pred             CCCccccccCC-hHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCccc
Confidence            99987543221 23344455556777889999999999999998888999999999999754

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.8e-30  Score=212.96  Aligned_cols=211  Identities=27%  Similarity=0.364  Sum_probs=183.1

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHHh
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~   80 (257)
                      +|++++++++.+++.+.+.++.++.+|++|+++++.+++++.++++++|++|||||.... .++.+.+.++|+..+++|+
T Consensus        36 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~  115 (258)
T PRK07890         36 ARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNV  115 (258)
T ss_pred             eCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhh
Confidence            688888888888888777789999999999999999999999999999999999997543 6777889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .+++.+++++.+.|.+.         .++||++||..+..+.+++..|+++|++++.++++++.|+. ++||++++|+||
T Consensus       116 ~~~~~l~~~~~~~~~~~---------~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~l~~~~a~~~~-~~~i~v~~v~pg  185 (258)
T PRK07890        116 LGTLRLTQAFTPALAES---------GGSIVMINSMVLRHSQPKYGAYKMAKGALLAASQSLATELG-PQGIRVNSVAPG  185 (258)
T ss_pred             HHHHHHHHHHHHHHHhC---------CCEEEEEechhhccCCCCcchhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEeCC
Confidence            99999999999999765         47899999999988888999999999999999999999998 889999999999


Q ss_pred             cccCCCCCCCC---------ChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          161 PIKDTAGVSKL---------APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       161 ~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      ++.|++.....         .............+..++.+|+|+++++++++++...+++|+.+.+|||..
T Consensus       186 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~~~~~G~~i~~~gg~~  256 (258)
T PRK07890        186 YIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVLFLASDLARAITGQTLDVNCGEY  256 (258)
T ss_pred             ccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHHHHHHHHHHcCHhhhCccCcEEEeCCccc
Confidence            99998643211         112233334445667788999999999999999877889999999999964

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.4e-29  Score=207.94  Aligned_cols=206  Identities=29%  Similarity=0.388  Sum_probs=181.9

Q ss_pred             cHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHH
Q 025124            4 RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT   83 (257)
Q Consensus         4 ~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~   83 (257)
                      +...++++.+++.+.+.++.++.+|+++.++++++++++.++++++|++|||+|.....++.+.+.++|++++++|+.++
T Consensus        39 ~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~  118 (245)
T PRK12937         39 SAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGA  118 (245)
T ss_pred             CHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHH
Confidence            44556777788877778899999999999999999999999999999999999987777888889999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccc
Q 025124           84 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK  163 (257)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~  163 (257)
                      +.+++++++.|.+          .++|+++||..+..+.+++..|+++|++++.|+++++.|+. +.||+++.|+||+++
T Consensus       119 ~~~~~~~~~~~~~----------~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~-~~~i~v~~i~pg~~~  187 (245)
T PRK12937        119 FVVLREAARHLGQ----------GGRIINLSTSVIALPLPGYGPYAASKAAVEGLVHVLANELR-GRGITVNAVAPGPVA  187 (245)
T ss_pred             HHHHHHHHHHhcc----------CcEEEEEeeccccCCCCCCchhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEeCCcc
Confidence            9999999999864          57899999999888888999999999999999999999998 889999999999999


Q ss_pred             CCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          164 DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       164 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                      |++...... ......+....+..+..+++|+++.+.+++++...+++|..+.+|||+
T Consensus       188 t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~  244 (245)
T PRK12937        188 TELFFNGKS-AEQIDQLAGLAPLERLGTPEEIAAAVAFLAGPDGAWVNGQVLRVNGGF  244 (245)
T ss_pred             CchhcccCC-HHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccccEEEeCCCC
Confidence            987543322 233445556677888899999999999999988889999999999985

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.8e-29  Score=209.73  Aligned_cols=214  Identities=31%  Similarity=0.404  Sum_probs=185.2

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|+.++++++.+.+...+.++.++.+|+++++++.++++++.+.++++|++|||||......+.+.+.++++..+++|+
T Consensus        40 ~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~  119 (263)
T PRK07814         40 AARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNV  119 (263)
T ss_pred             EeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhc
Confidence            36888888888888877677899999999999999999999999999999999999987677788899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .+++.+.+++.+.|.+...       .|+||++||..+..+.++...|+++|+++++++++++.|+. + +|++++|+||
T Consensus       120 ~~~~~l~~~~~~~~~~~~~-------~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~e~~-~-~i~v~~i~Pg  190 (263)
T PRK07814        120 ATAHALTVAAVPLMLEHSG-------GGSVINISSTMGRLAGRGFAAYGTAKAALAHYTRLAALDLC-P-RIRVNAIAPG  190 (263)
T ss_pred             HHHHHHHHHHHHHHHhhcC-------CeEEEEEccccccCCCCCCchhHHHHHHHHHHHHHHHHHHC-C-CceEEEEEeC
Confidence            9999999999999987421       68999999999998989999999999999999999999997 6 6999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ++.|++..................+..+..+|+|+++.+++++++...+++|+.+.+++|...
T Consensus       191 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~~~~~  253 (263)
T PRK07814        191 SILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLASPAGSYLTGKTLEVDGGLTF  253 (263)
T ss_pred             CCcCchhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCCEEEECCCccC
Confidence            999886533222233333444445666778999999999999998888999999999999766

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.97  E-value=1.7e-29  Score=207.95  Aligned_cols=212  Identities=28%  Similarity=0.411  Sum_probs=178.5

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHHh
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~   80 (257)
                      .|++++++++.+++...+.++.++.||+++.++++++++++.+.++++|++|||||.... .++.+.+.++|+..+++|+
T Consensus        34 ~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~  113 (248)
T PRK06947         34 ARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNV  113 (248)
T ss_pred             CCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhcc
Confidence            467778888888887777789999999999999999999999999999999999997644 5677889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccccccc-chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~-~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      .+++.+++++++.|..++.+.     .++||++||..+..+.+. +..|+++|+++++|+++++.++. +.||+|+.|+|
T Consensus       114 ~~~~~l~~~~~~~~~~~~~~~-----~~~ii~~sS~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~-~~~i~v~~i~P  187 (248)
T PRK06947        114 LGAYLCAREAARRLSTDRGGR-----GGAIVNVSSIASRLGSPNEYVDYAGSKGAVDTLTLGLAKELG-PHGVRVNAVRP  187 (248)
T ss_pred             HHHHHHHHHHHHHHHhcCCCC-----CcEEEEECchhhcCCCCCCCcccHhhHHHHHHHHHHHHHHhh-hhCcEEEEEec
Confidence            999999999999987653211     478999999988877664 56899999999999999999998 88999999999


Q ss_pred             CcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCC
Q 025124          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG  220 (257)
Q Consensus       160 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg  220 (257)
                      |+++|++....-. .+.........+..+..+++++++.+++++++...+++|+.+.+|||
T Consensus       188 g~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~e~va~~~~~l~~~~~~~~~G~~~~~~gg  247 (248)
T PRK06947        188 GLIETEIHASGGQ-PGRAARLGAQTPLGRAGEADEVAETIVWLLSDAASYVTGALLDVGGG  247 (248)
T ss_pred             cCcccccccccCC-HHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCccccCcCCceEeeCCC
Confidence            9999997533211 12222233445667788999999999999999888999999999987

>PRK07069 short chain dehydrogenase; Validated

Probab=99.97  E-value=1.1e-29  Score=209.26  Aligned_cols=213  Identities=29%  Similarity=0.374  Sum_probs=181.2

Q ss_pred             CCc-HHHHHHHHHHHHhcC--CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHH
Q 025124            2 GRR-KTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI   78 (257)
Q Consensus         2 ~r~-~~~l~~~~~~l~~~~--~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~   78 (257)
                      +|+ .++++.+.+++.+..  ..++.+++|++|.++++++++++.+.++++|++|||+|.....++.+.+.+++++++++
T Consensus        30 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~  109 (251)
T PRK07069         30 DINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAI  109 (251)
T ss_pred             eCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHH
Confidence            466 667777777776542  23567899999999999999999999999999999999877788888999999999999


Q ss_pred             HhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCC--CeEEEE
Q 025124           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY--AIRVNG  156 (257)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~--gi~v~~  156 (257)
                      |+.+++.+++.+++.|.+++        .++||++||..+..+.+++..|+++|+++++|+++++.|+. ++  +|+++.
T Consensus       110 n~~~~~~~~~~~~~~~~~~~--------~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~~~i~v~~  180 (251)
T PRK07069        110 NVESIFLGCKHALPYLRASQ--------PASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCA-RRGLDVRCNS  180 (251)
T ss_pred             hhHHHHHHHHHHHHHHhhcC--------CcEEEEecChhhccCCCCCchhHHHHHHHHHHHHHHHHHhc-ccCCcEEEEE
Confidence            99999999999999999865        68999999999998889999999999999999999999987 44  599999


Q ss_pred             EecCcccCCCCCCCC---ChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          157 IAPGPIKDTAGVSKL---APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       157 v~Pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      |+||+++|++.....   ...+.........+..++.+|+|+++.+++|+++...+++|+.+.+|||...
T Consensus       181 v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~~g~~~  250 (251)
T PRK07069        181 IHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDESRFVTGAELVIDGGICA  250 (251)
T ss_pred             EeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCeec
Confidence            999999998754211   1222333344556677888999999999999998889999999999999643

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.97  E-value=1.8e-29  Score=207.92  Aligned_cols=212  Identities=24%  Similarity=0.346  Sum_probs=187.7

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.+..+++.+++.+.+.++.++.+|++|.++++++++.+.+.++++|++|||+|.....++.+.+.++|+..+++|+.
T Consensus        34 ~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~  113 (250)
T TIGR03206        34 DLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLT  113 (250)
T ss_pred             cCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            67888888888888877778999999999999999999999999999999999999876677888899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.+.+.+++.|.+.+        .++|+++||..+..+.+....|+++|+|++.++++++.++. +.||+++.++||+
T Consensus       114 ~~~~l~~~~~~~~~~~~--------~~~ii~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~-~~~i~v~~v~pg~  184 (250)
T TIGR03206       114 GALHMHHAVLPGMVERG--------AGRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHA-RHGITVNVVCPGP  184 (250)
T ss_pred             HHHHHHHHHHHHHHhcC--------CeEEEEECchhhccCCCCCchHHHHHHHHHHHHHHHHHHHh-HhCcEEEEEecCc
Confidence            99999999999998765        68899999999998888999999999999999999999998 7899999999999


Q ss_pred             ccCCCCCCCC----ChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          162 IKDTAGVSKL----APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       162 v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      ++|++.....    ........+....+.+++.+++|+|+++.+++++...+++|+.+.+|||..
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~  249 (250)
T TIGR03206       185 TDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSDDASFITGQVLSVSGGLT  249 (250)
T ss_pred             ccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCCcCcEEEeCCCcc
Confidence            9998654321    223344455566777888999999999999999989999999999999854

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.97  E-value=1.1e-29  Score=207.70  Aligned_cols=188  Identities=22%  Similarity=0.262  Sum_probs=161.1

Q ss_pred             eEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCC
Q 025124           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ  101 (257)
Q Consensus        22 ~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  101 (257)
                      ++++.+|++|.++++.+++++.+.++++|++|||||........+.+.++|++++++|+.+++.+++.+++.|.++..  
T Consensus        48 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~--  125 (236)
T PRK06483         48 AQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGH--  125 (236)
T ss_pred             CEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCC--
Confidence            678999999999999999999999999999999999765555667789999999999999999999999999987530  


Q ss_pred             CCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHHHHhh
Q 025124          102 ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT  181 (257)
Q Consensus       102 ~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~  181 (257)
                          ..|+||++||..+..+.+++..|+++|+++++|+++++.|+. + +||+|+|+||++.|+..    ..........
T Consensus       126 ----~~g~iv~~ss~~~~~~~~~~~~Y~asKaal~~l~~~~a~e~~-~-~irvn~v~Pg~~~~~~~----~~~~~~~~~~  195 (236)
T PRK06483        126 ----AASDIIHITDYVVEKGSDKHIAYAASKAALDNMTLSFAAKLA-P-EVKVNSIAPALILFNEG----DDAAYRQKAL  195 (236)
T ss_pred             ----CCceEEEEcchhhccCCCCCccHHHHHHHHHHHHHHHHHHHC-C-CcEEEEEccCceecCCC----CCHHHHHHHh
Confidence                137899999998888888899999999999999999999997 6 59999999999987532    1222333344


Q ss_pred             hhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          182 DYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       182 ~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ...++++...|+|+++.+.||++  +.+++|+++.+|||..+
T Consensus       196 ~~~~~~~~~~~~~va~~~~~l~~--~~~~~G~~i~vdgg~~~  235 (236)
T PRK06483        196 AKSLLKIEPGEEEIIDLVDYLLT--SCYVTGRSLPVDGGRHL  235 (236)
T ss_pred             ccCccccCCCHHHHHHHHHHHhc--CCCcCCcEEEeCccccc
Confidence            45677788999999999999996  57899999999999765

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.97  E-value=5.2e-30  Score=213.19  Aligned_cols=193  Identities=30%  Similarity=0.393  Sum_probs=164.7

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCC---------CCCCCCHHHHHHHHHHHhHHHHHHHHHHH
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV---------PAEDLSPNGFRTVIEIDSVGTFIMCHEAL   91 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~---------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   91 (257)
                      ++.++.+|++|+++++.+++++.++++++|++|||||.....         ++.+.+.++|++++++|+.+++.+++++.
T Consensus        50 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  129 (266)
T PRK06171         50 NYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVA  129 (266)
T ss_pred             ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHH
Confidence            466788999999999999999999999999999999965432         23467899999999999999999999999


Q ss_pred             HHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccc-CCCCCCC
Q 025124           92 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK-DTAGVSK  170 (257)
Q Consensus        92 ~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~-t~~~~~~  170 (257)
                      ++|.+++        .|+||++||..+..+.++...|+++|+++++|+++++.|+. ++||++|+|+||++. |++....
T Consensus       130 ~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~gi~v~~v~pG~~~~t~~~~~~  200 (266)
T PRK06171        130 RQMVKQH--------DGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRSWAKELG-KHNIRVVGVAPGILEATGLRTPE  200 (266)
T ss_pred             HHHHhcC--------CcEEEEEccccccCCCCCCchhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeccccccCCCcChh
Confidence            9998765        68999999999998888999999999999999999999999 899999999999997 4432111


Q ss_pred             C----------ChHHHHHHhhh--hccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          171 L----------APEEIRSKATD--YMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       171 ~----------~~~~~~~~~~~--~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      .          ...+..+.+..  ..|++++.+|+|+|.++.||+++.+++++|+.+.+|||+.
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg~~  264 (266)
T PRK06171        201 YEEALAYTRGITVEQLRAGYTKTSTIPLGRSGKLSEVADLVCYLLSDRASYITGVTTNIAGGKT  264 (266)
T ss_pred             hhhhhccccCCCHHHHHhhhcccccccCCCCCCHHHhhhheeeeeccccccceeeEEEecCccc
Confidence            0          01222233333  5688899999999999999999999999999999999964

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=2.5e-29  Score=207.98  Aligned_cols=198  Identities=23%  Similarity=0.324  Sum_probs=173.6

Q ss_pred             HHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHH
Q 025124           11 AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA   90 (257)
Q Consensus        11 ~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~   90 (257)
                      +.+++...+.+++++.+|+++.+++..+++++.+.++++|++|||||.....++.+.+.++++..+++|+.+++.+.+++
T Consensus        58 ~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~  137 (256)
T PRK12748         58 LKEEIESYGVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAF  137 (256)
T ss_pred             HHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence            55666666778999999999999999999999999999999999999877778888999999999999999999999999


Q ss_pred             HHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCC
Q 025124           91 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK  170 (257)
Q Consensus        91 ~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~  170 (257)
                      ++.|.+..        .++||++||..+..+.++...|+++|+++++|+++++.|+. +.||+++.|+||.++|++... 
T Consensus       138 ~~~~~~~~--------~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~i~Pg~~~t~~~~~-  207 (256)
T PRK12748        138 AKQYDGKA--------GGRIINLTSGQSLGPMPDELAYAATKGAIEAFTKSLAPELA-EKGITVNAVNPGPTDTGWITE-  207 (256)
T ss_pred             HHHhhhcC--------CeEEEEECCccccCCCCCchHHHHHHHHHHHHHHHHHHHHH-HhCeEEEEEEeCcccCCCCCh-
Confidence            99997755        68999999998888888889999999999999999999998 889999999999999885431 


Q ss_pred             CChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          171 LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                          ..........+..++..|+|+++.+.+++++.+.+++|+.+.+|||+.
T Consensus       208 ----~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g~~  255 (256)
T PRK12748        208 ----ELKHHLVPKFPQGRVGEPVDAARLIAFLVSEEAKWITGQVIHSEGGFS  255 (256)
T ss_pred             ----hHHHhhhccCCCCCCcCHHHHHHHHHHHhCcccccccCCEEEecCCcc
Confidence                222223334455678899999999999999988899999999999963

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.97  E-value=5.1e-30  Score=212.21  Aligned_cols=209  Identities=19%  Similarity=0.135  Sum_probs=171.7

Q ss_pred             CCCcHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHHHhCCc----cEEEeCCCCCCC--CCCCCC-CHHH
Q 025124            1 MGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKL----DILVNAAAGNFL--VPAEDL-SPNG   71 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~i----d~li~~ag~~~~--~~~~~~-~~~~   71 (257)
                      ++|++++++++.+++...  +.++.++.+|+++.++++++++++.+.++.+    |++|||||....  ....+. +.++
T Consensus        34 ~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~  113 (256)
T TIGR01500        34 SARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQ  113 (256)
T ss_pred             EEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHH
Confidence            368889999999988763  4578899999999999999999999887753    699999996533  223333 5789


Q ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCC
Q 025124           72 FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA  151 (257)
Q Consensus        72 ~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~g  151 (257)
                      |++++++|+.+++.+++.++|.|.++..      ..++||++||..+..+.+++..|+++|+|+++|+++++.|+. ++|
T Consensus       114 ~~~~~~vN~~~~~~~~~~~~~~l~~~~~------~~~~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~-~~~  186 (256)
T TIGR01500       114 VQNYWALNLTSMLCLTSSVLKAFKDSPG------LNRTVVNISSLCAIQPFKGWALYCAGKAARDMLFQVLALEEK-NPN  186 (256)
T ss_pred             HHHHHHhhhHHHHHHHHHHHHHHhhcCC------CCCEEEEECCHHhCCCCCCchHHHHHHHHHHHHHHHHHHHhc-CCC
Confidence            9999999999999999999999986420      047899999999998989999999999999999999999998 899


Q ss_pred             eEEEEEecCcccCCCCCCCC---ChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEe
Q 025124          152 IRVNGIAPGPIKDTAGVSKL---APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIV  217 (257)
Q Consensus       152 i~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~  217 (257)
                      |+|++|+||+++|++.....   ...+....+....+.+++.+|+|+|..++++++ ..++++|+++.+
T Consensus       187 i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~~-~~~~~~G~~~~~  254 (256)
T TIGR01500       187 VRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAKGKLVDPKVSAQKLLSLLE-KDKFKSGAHVDY  254 (256)
T ss_pred             eEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhcCCCCCHHHHHHHHHHHHh-cCCcCCcceeec
Confidence            99999999999998653211   112233444556678889999999999999996 467899998865

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.97  E-value=1.8e-29  Score=210.22  Aligned_cols=216  Identities=22%  Similarity=0.295  Sum_probs=170.4

Q ss_pred             CcHHHHHHHHHHHHhc-CCCeEEEEccCCCHHHH----HHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCH--------
Q 025124            3 RRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDA----VRVVESTINHFGKLDILVNAAAGNFLVPAEDLSP--------   69 (257)
Q Consensus         3 r~~~~l~~~~~~l~~~-~~~~~~~~~Dls~~~~~----~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~--------   69 (257)
                      |+.++++.+.+++... +.++.++.+|++|++++    +.+++.+.+.++++|+||||||.....++.+.+.        
T Consensus        34 ~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~  113 (267)
T TIGR02685        34 RSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKK  113 (267)
T ss_pred             CcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHccCCceEEEECCccCCCCcccccccccccccch
Confidence            4567788888887653 45677899999999865    5566666677899999999999765555544443        


Q ss_pred             ---HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHh
Q 025124           70 ---NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW  146 (257)
Q Consensus        70 ---~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~  146 (257)
                         ++|.+++++|+.+++.++++++++|.++...  .....+.|++++|..+..+.+++..|+++|+|+++|+++++.|+
T Consensus       114 ~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~--~~~~~~~iv~~~s~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~  191 (267)
T TIGR02685       114 SLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAE--QRSTNLSIVNLCDAMTDQPLLGFTMYTMAKHALEGLTRSAALEL  191 (267)
T ss_pred             hhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccc--cCCCCeEEEEehhhhccCCCcccchhHHHHHHHHHHHHHHHHHH
Confidence               3588999999999999999999998654210  01124789999999888888889999999999999999999999


Q ss_pred             cCCCCeEEEEEecCcccCCCCCCCCChHHHHHHhhhhccCC-CCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCC
Q 025124          147 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSN  225 (257)
Q Consensus       147 ~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~  225 (257)
                      . ++||+|++|+||++.|+...    .......+....++. +..+|+|+++.+++++++.+.+++|+.+.+|||+.+..
T Consensus       192 ~-~~gi~v~~v~PG~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~~~~~  266 (267)
T TIGR02685       192 A-PLQIRVNGVAPGLSLLPDAM----PFEVQEDYRRKVPLGQREASAEQIADVVIFLVSPKAKYITGTCIKVDGGLSLTR  266 (267)
T ss_pred             h-hhCeEEEEEecCCccCcccc----chhHHHHHHHhCCCCcCCCCHHHHHHHHHHHhCcccCCcccceEEECCceeccC
Confidence            9 89999999999999866321    122222333344554 57899999999999999989999999999999987653

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.97  E-value=4.3e-29  Score=206.87  Aligned_cols=212  Identities=35%  Similarity=0.487  Sum_probs=182.3

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|+.++++.+.+++...+.++.++.||++|+++++.+++++.+.++++|++|||+|.....++.+.+.+.|++.+++|+
T Consensus        42 ~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~  121 (259)
T PRK08213         42 SARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNV  121 (259)
T ss_pred             EeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHh
Confidence            36788888888888887777899999999999999999999999999999999999987667778889999999999999


Q ss_pred             HHHHHHHHHHHHH-HHhcCCCCCCCCCCceEEEEccccccccccc----chhhHHHHHHHHHHHHHHHHHhcCCCCeEEE
Q 025124           81 VGTFIMCHEALKY-LKKGGRGQASSSSGGIIINISATLHYTATWY----QIHVSAAKAAVDSITRSLALEWGTDYAIRVN  155 (257)
Q Consensus        81 ~~~~~l~~~~~~~-~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~----~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~  155 (257)
                      .+++.+++++.++ |.+++        .++||++||..+..+.+.    ...|+++|++++.++++++.++. ++||+++
T Consensus       122 ~~~~~l~~~~~~~~l~~~~--------~~~~v~~sS~~~~~~~~~~~~~~~~Y~~sKa~~~~~~~~~a~~~~-~~gi~v~  192 (259)
T PRK08213        122 RGLFLLSQAVAKRSMIPRG--------YGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAEWG-PHGIRVN  192 (259)
T ss_pred             HHHHHHHHHHHHHHHHhcC--------CeEEEEECChhhccCCCccccCcchHHHHHHHHHHHHHHHHHHhc-ccCEEEE
Confidence            9999999999998 66654        589999999877766543    48899999999999999999998 8899999


Q ss_pred             EEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          156 GIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       156 ~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      .|+||+++|++.....  ....+......+..++++++|++..+.+++++.+.+++|+.+.+|||..+
T Consensus       193 ~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~~~~~  258 (259)
T PRK08213        193 AIAPGFFPTKMTRGTL--ERLGEDLLAHTPLGRLGDDEDLKGAALLLASDASKHITGQILAVDGGVSA  258 (259)
T ss_pred             EEecCcCCCcchhhhh--HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCeec
Confidence            9999999988643221  22233344556777888999999999999999999999999999999754

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.6e-29  Score=210.73  Aligned_cols=210  Identities=30%  Similarity=0.383  Sum_probs=179.7

Q ss_pred             CCcH-HHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHHH
Q 025124            2 GRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         2 ~r~~-~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n   79 (257)
                      +|+. +.++.+.+.+...+.++.++.+|+++.++++++++++.+.++++|++|||||... ..++.+.+.++|+..+++|
T Consensus        77 ~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N  156 (290)
T PRK06701         77 YLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTN  156 (290)
T ss_pred             eCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhh
Confidence            3443 3456666677666778999999999999999999999999999999999999754 3667889999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.+++.+++++++.|.+          .++||++||..+..+.+....|+++|+|++.|+++++.++. ++||++++|+|
T Consensus       157 ~~~~~~l~~a~~~~~~~----------~g~iV~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~-~~gIrv~~i~p  225 (290)
T PRK06701        157 IYSYFHMTKAALPHLKQ----------GSAIINTGSITGYEGNETLIDYSATKGAIHAFTRSLAQSLV-QKGIRVNAVAP  225 (290)
T ss_pred             hHHHHHHHHHHHHHHhh----------CCeEEEEecccccCCCCCcchhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEec
Confidence            99999999999999854          47899999999988888889999999999999999999998 88999999999


Q ss_pred             CcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       160 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      |+++|++...... .+....+....+.+++.+++|+++++++|+++.+.+++|..+.+|||+..
T Consensus       226 G~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~ll~~~~~~~~G~~i~idgg~~~  288 (290)
T PRK06701        226 GPIWTPLIPSDFD-EEKVSQFGSNTPMQRPGQPEELAPAYVFLASPDSSYITGQMLHVNGGVIV  288 (290)
T ss_pred             CCCCCcccccccC-HHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCcccCCccCcEEEeCCCccc
Confidence            9999986543322 22233344556778889999999999999999888999999999999654

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.6e-29  Score=206.76  Aligned_cols=207  Identities=26%  Similarity=0.339  Sum_probs=175.8

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.+.++++.+++   +.++.++.+|++|.+++..+++.+.+.++++|++|||+|.....++.+.+.++|+..+++|+.
T Consensus        37 ~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~  113 (249)
T PRK06500         37 GRDPASLEAARAEL---GESALVIRADAGDVAAQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVK  113 (249)
T ss_pred             cCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            57766666655444   567889999999999999999999999999999999999877777888899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.++++++|.|.+          .+++++++|..+..+.+....|+++|+++++|+++++.|+. ++||+++.|+||.
T Consensus       114 ~~~~l~~~~~~~~~~----------~~~~i~~~S~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~i~pg~  182 (249)
T PRK06500        114 GPYFLIQALLPLLAN----------PASIVLNGSINAHIGMPNSSVYAASKAALLSLAKTLSGELL-PRGIRVNAVSPGP  182 (249)
T ss_pred             HHHHHHHHHHHHHhc----------CCEEEEEechHhccCCCCccHHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCc
Confidence            999999999999854          46799999988888888899999999999999999999998 8899999999999


Q ss_pred             ccCCCCCCCC-C---hHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          162 IKDTAGVSKL-A---PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       162 v~t~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      ++|++..... .   ............+..++.+|+|+++++.+++++...+++|+.+.+|||..
T Consensus       183 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~gg~~  247 (249)
T PRK06500        183 VQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLASDESAFIVGSEIIVDGGMS  247 (249)
T ss_pred             CCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCeEEECCCcc
Confidence            9998643211 1   11222333444567778899999999999999888899999999999953

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=4.4e-29  Score=211.69  Aligned_cols=230  Identities=23%  Similarity=0.264  Sum_probs=183.1

Q ss_pred             cHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHH
Q 025124            4 RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT   83 (257)
Q Consensus         4 ~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~   83 (257)
                      +.+.++++++++.+.+.++.++.+|++|.++++++++++.+ +|++|++|||||+.....+.+.+.++|+.++++|+.++
T Consensus        46 ~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~-~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~  124 (306)
T PRK07792         46 SALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG-LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGH  124 (306)
T ss_pred             chhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH-hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHH
Confidence            34567788888888788899999999999999999999999 99999999999988777888899999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccc
Q 025124           84 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK  163 (257)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~  163 (257)
                      +.+++++.++|.++.... .....|+||++||..+..+.++.+.|+++|+++++|+++++.|+. ++||+||+|+||. .
T Consensus       125 ~~l~~~~~~~~~~~~~~~-~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~-~~gI~vn~i~Pg~-~  201 (306)
T PRK07792        125 FLLTRNAAAYWRAKAKAA-GGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGITALTLSAARALG-RYGVRANAICPRA-R  201 (306)
T ss_pred             HHHHHHHHHHHHHhhccc-CCCCCcEEEEECCcccccCCCCCchHHHHHHHHHHHHHHHHHHhh-hcCeEEEEECCCC-C
Confidence            999999999997642100 001147999999999988888899999999999999999999998 8999999999994 6


Q ss_pred             CCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC-------------CCCCCc
Q 025124          164 DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS-------------NPRDLP  230 (257)
Q Consensus       164 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~-------------~~~~~~  230 (257)
                      |++...........  ..   ......+|++++..+.||+++.+.+++|+.+.++||....             ..+|-+
T Consensus       202 t~~~~~~~~~~~~~--~~---~~~~~~~pe~va~~v~~L~s~~~~~~tG~~~~v~gg~~~~~~~~~~~~~~~~~~~~~~~  276 (306)
T PRK07792        202 TAMTADVFGDAPDV--EA---GGIDPLSPEHVVPLVQFLASPAAAEVNGQVFIVYGPMVTLVAAPVVERRFDADGDAWDP  276 (306)
T ss_pred             Cchhhhhccccchh--hh---hccCCCCHHHHHHHHHHHcCccccCCCCCEEEEcCCeEEEEeeeeecceecCCCCCCCH
Confidence            76542211110000  00   1112358999999999999988889999999999997442             134556


Q ss_pred             HHHHHHHHHHHh
Q 025124          231 KEAVNQLSRAVE  242 (257)
Q Consensus       231 ~~~~~~~~~~~~  242 (257)
                      +.....+.+.+.
T Consensus       277 ~~~~~~~~~~~~  288 (306)
T PRK07792        277 GELSATLRDYFA  288 (306)
T ss_pred             HHHHHHHHHHhh
Confidence            666666666543

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.4e-29  Score=209.65  Aligned_cols=207  Identities=22%  Similarity=0.376  Sum_probs=168.2

Q ss_pred             cHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHH
Q 025124            4 RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT   83 (257)
Q Consensus         4 ~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~   83 (257)
                      +.+.++++.+++...+.++.++++|++++++++++++++.+.++++|++|||||.....++.+.+.++|++++++|+.++
T Consensus        45 ~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~  124 (257)
T PRK12744         45 SKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSA  124 (257)
T ss_pred             chHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHH
Confidence            45667777777776677899999999999999999999999999999999999987777888899999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCceEEEE-cccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcc
Q 025124           84 FIMCHEALKYLKKGGRGQASSSSGGIIINI-SATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (257)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~g~ii~i-ss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v  162 (257)
                      +.+++++.++|.+          .|+++++ +|..+ .+.+++..|+++|+|+++|+++++.|+. ++||+|++|+||++
T Consensus       125 ~~~~~~~~~~~~~----------~~~iv~~~ss~~~-~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~v~pg~v  192 (257)
T PRK12744        125 FFFIKEAGRHLND----------NGKIVTLVTSLLG-AFTPFYSAYAGSKAPVEHFTRAASKEFG-ARGISVTAVGPGPM  192 (257)
T ss_pred             HHHHHHHHHhhcc----------CCCEEEEecchhc-ccCCCcccchhhHHHHHHHHHHHHHHhC-cCceEEEEEecCcc
Confidence            9999999999865          4567776 44433 3456788999999999999999999999 88999999999999


Q ss_pred             cCCCCCCCCChHHHH--HHhhhhccCC--CCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          163 KDTAGVSKLAPEEIR--SKATDYMAAY--KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       163 ~t~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      .|++.......+...  .......++.  ++.+|+|++..+++|+++ ..+++|+.+.+|||..+
T Consensus       193 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~-~~~~~g~~~~~~gg~~~  256 (257)
T PRK12744        193 DTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPFIRFLVTD-GWWITGQTILINGGYTT  256 (257)
T ss_pred             ccchhccccccchhhcccccccccccccCCCCCHHHHHHHHHHhhcc-cceeecceEeecCCccC
Confidence            998653322211100  1111122222  678999999999999985 67899999999999654

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.6e-29  Score=204.74  Aligned_cols=211  Identities=28%  Similarity=0.379  Sum_probs=178.7

Q ss_pred             CcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHHhH
Q 025124            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         3 r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~   81 (257)
                      |+++++++..+.+.+.+.++.++.+|++|.++++++++++.++++++|++|||+|.... ..+.+.+.++|+..+++|+.
T Consensus        35 ~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~  114 (248)
T PRK06123         35 RNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVV  114 (248)
T ss_pred             CCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            55667777778887777788899999999999999999999999999999999997653 56778899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccccccc-chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~-~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      +++.+++++++.|.++..+.     +|+||++||..+..+.++ +..|+++|+++++|+++++.++. ++||+++.|+||
T Consensus       115 ~~~~l~~~~~~~~~~~~~~~-----~g~iv~~sS~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~~~~-~~~i~v~~i~pg  188 (248)
T PRK06123        115 GSFLCAREAVKRMSTRHGGR-----GGAIVNVSSMAARLGSPGEYIDYAASKGAIDTMTIGLAKEVA-AEGIRVNAVRPG  188 (248)
T ss_pred             HHHHHHHHHHHHHHhcCCCC-----CeEEEEECchhhcCCCCCCccchHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecC
Confidence            99999999999998653111     478999999988887776 46799999999999999999998 889999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCC
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG  220 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg  220 (257)
                      .+.|++...... ...........++.+..+|+|+++.+.+++++...+++|+.+.++||
T Consensus       189 ~v~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~gg  247 (248)
T PRK06123        189 VIYTEIHASGGE-PGRVDRVKAGIPMGRGGTAEEVARAILWLLSDEASYTTGTFIDVSGG  247 (248)
T ss_pred             cccCchhhccCC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEeecCC
Confidence            999986543222 22333344556777788999999999999998888899999999987

>PRK05717 oxidoreductase; Validated

Probab=99.97  E-value=4e-29  Score=206.67  Aligned_cols=207  Identities=25%  Similarity=0.328  Sum_probs=173.5

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC--CCCCCCCHHHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL--VPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n   79 (257)
                      +|+.++++++.+.+   +.++.++.+|+++.++++.+++++.++++++|++|||||....  .++.+.+.++|+..+++|
T Consensus        41 ~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n  117 (255)
T PRK05717         41 DLDRERGSKVAKAL---GENAWFIAMDVADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVN  117 (255)
T ss_pred             cCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHh
Confidence            46666665554433   4578899999999999999999999999999999999997643  567788999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.+++.+++++.|+|.+.         .|+||++||..+..+.+....|+++|+++++|+++++.++. + +|++++|+|
T Consensus       118 ~~~~~~l~~~~~~~~~~~---------~g~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~~~~-~-~i~v~~i~P  186 (255)
T PRK05717        118 LTGPMLLAKHCAPYLRAH---------NGAIVNLASTRARQSEPDTEAYAASKGGLLALTHALAISLG-P-EIRVNAVSP  186 (255)
T ss_pred             hHHHHHHHHHHHHHHHHc---------CcEEEEEcchhhcCCCCCCcchHHHHHHHHHHHHHHHHHhc-C-CCEEEEEec
Confidence            999999999999999764         57899999999998888899999999999999999999986 5 599999999


Q ss_pred             CcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       160 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      |+++|++..... ............+.++..+|+|++..+.+++++...+++|+.+.+|||...
T Consensus       187 g~i~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg~~~  249 (255)
T PRK05717        187 GWIDARDPSQRR-AEPLSEADHAQHPAGRVGTVEDVAAMVAWLLSRQAGFVTGQEFVVDGGMTR  249 (255)
T ss_pred             ccCcCCcccccc-chHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCchhcCccCcEEEECCCceE
Confidence            999998643321 122222223345677889999999999999998888999999999999653

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.97  E-value=4.5e-29  Score=204.83  Aligned_cols=205  Identities=26%  Similarity=0.291  Sum_probs=177.2

Q ss_pred             HHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHH
Q 025124            8 LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC   87 (257)
Q Consensus         8 l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~   87 (257)
                      ..+....+...+.++.++.+|+++.++++++++++.++++++|++|||+|......+.+.+.++|+..+++|+.+++.++
T Consensus        40 ~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  119 (245)
T PRK12824         40 AKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVT  119 (245)
T ss_pred             HHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHH
Confidence            33343444334567899999999999999999999999999999999999877777888999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCC
Q 025124           88 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG  167 (257)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~  167 (257)
                      +.+++.|++..        .++||++||..+..+.++...|+++|+++++|+++++.++. +.||+++.++||++.|++.
T Consensus       120 ~~~~~~~~~~~--------~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~pg~~~t~~~  190 (245)
T PRK12824        120 QPLFAAMCEQG--------YGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASEGA-RYGITVNCIAPGYIATPMV  190 (245)
T ss_pred             HHHHHHHHHhC--------CeEEEEECChhhccCCCCChHHHHHHHHHHHHHHHHHHHHH-HhCeEEEEEEEcccCCcch
Confidence            99999998765        68999999999988888999999999999999999999998 8899999999999998865


Q ss_pred             CCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          168 VSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ...  .......+....+.+++.+++|+++.+.+|+++.+.+++|+.+.+|||+.+
T Consensus       191 ~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~g~~~  244 (245)
T PRK12824        191 EQM--GPEVLQSIVNQIPMKRLGTPEEIAAAVAFLVSEAAGFITGETISINGGLYM  244 (245)
T ss_pred             hhc--CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEEEECCCeec
Confidence            432  233334445556677888999999999999988888999999999999754

>PRK05599 hypothetical protein; Provisional

Probab=99.97  E-value=8.8e-30  Score=209.59  Aligned_cols=212  Identities=16%  Similarity=0.100  Sum_probs=172.7

Q ss_pred             CCCcHHHHHHHHHHHHhcCC-CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~-~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      ++|+.++++++.+++.+.+. ++.+++||++|.++++++++++.+.+|++|++|||+|......+.+.+.+++++++++|
T Consensus        29 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n  108 (246)
T PRK05599         29 AARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVD  108 (246)
T ss_pred             EeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHH
Confidence            37899999999999987764 48899999999999999999999999999999999997665556667788888999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.+.+.+++.++|.|.++..       +|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+|++|+|
T Consensus       109 ~~~~~~~~~~~~~~m~~~~~-------~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~el~-~~~I~v~~v~P  180 (246)
T PRK05599        109 YTAQVSMLTVLADELRAQTA-------PAAIVAFSSIAGWRARRANYVYGSTKAGLDAFCQGLADSLH-GSHVRLIIARP  180 (246)
T ss_pred             HHhHHHHHHHHHHHHHhcCC-------CCEEEEEeccccccCCcCCcchhhHHHHHHHHHHHHHHHhc-CCCceEEEecC
Confidence            99999999999999987531       58999999999999888999999999999999999999998 88999999999


Q ss_pred             CcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc--CCCCCCcHHHHHH
Q 025124          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL--SNPRDLPKEAVNQ  236 (257)
Q Consensus       160 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~--~~~~~~~~~~~~~  236 (257)
                      |++.|++.....             +.....+|+|+|+.++++++....   +..+.++++..+  ...+.+|+.+...
T Consensus       181 G~v~T~~~~~~~-------------~~~~~~~pe~~a~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~p~~~~~~  243 (246)
T PRK05599        181 GFVIGSMTTGMK-------------PAPMSVYPRDVAAAVVSAITSSKR---STTLWIPGRLRVLAWIMRLVPRPIWRK  243 (246)
T ss_pred             CcccchhhcCCC-------------CCCCCCCHHHHHHHHHHHHhcCCC---CceEEeCccHHHHHHHHHhCcHHHHHh
Confidence            999998642211             111135899999999999976422   456777766422  2223444444443

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.97  E-value=6.8e-29  Score=204.20  Aligned_cols=208  Identities=34%  Similarity=0.496  Sum_probs=180.5

Q ss_pred             CcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHH
Q 025124            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG   82 (257)
Q Consensus         3 r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~   82 (257)
                      |+++.++++.+++.+.+.++.++.+|+++++++..+++++.+.++++|++|||||......+.+.+.++++..+++|+.+
T Consensus        39 ~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~  118 (247)
T PRK12935         39 SSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSS  118 (247)
T ss_pred             CcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHH
Confidence            45677788888887777789999999999999999999999999999999999998777777888999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcc
Q 025124           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (257)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v  162 (257)
                      ++.+++++++.|.++.        .++||++||..+..+.+++..|+++|+++++|+++++.|+. +.||+++.++||++
T Consensus       119 ~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~pg~v  189 (247)
T PRK12935        119 VFNTTSAVLPYITEAE--------EGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELA-KTNVTVNAICPGFI  189 (247)
T ss_pred             HHHHHHHHHHHHHHcC--------CcEEEEEcchhhcCCCCCCcchHHHHHHHHHHHHHHHHHHH-HcCcEEEEEEeCCC
Confidence            9999999999998765        68999999998888888899999999999999999999998 88999999999999


Q ss_pred             cCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          163 KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       163 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      +|++....  ............+.+++.+|+|+++++++++.. ..+++|+.+.++||+.
T Consensus       190 ~t~~~~~~--~~~~~~~~~~~~~~~~~~~~edva~~~~~~~~~-~~~~~g~~~~i~~g~~  246 (247)
T PRK12935        190 DTEMVAEV--PEEVRQKIVAKIPKKRFGQADEIAKGVVYLCRD-GAYITGQQLNINGGLY  246 (247)
T ss_pred             cChhhhhc--cHHHHHHHHHhCCCCCCcCHHHHHHHHHHHcCc-ccCccCCEEEeCCCcc
Confidence            98764422  222333344455667789999999999999975 4578999999999953

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.8e-29  Score=207.04  Aligned_cols=211  Identities=27%  Similarity=0.282  Sum_probs=176.2

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+++.+ ++.+++.+.+.+++++.+|+++.++++.+++++.+.++++|++|||+|......+.+.. ++|+..+++|+.
T Consensus        38 ~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~-~~~~~~~~~n~~  115 (258)
T PRK08628         38 GRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGR-EAFVASLERNLI  115 (258)
T ss_pred             cCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCcccCCCcccCCH-HHHHHHHhhhhH
Confidence            5777766 77778877778899999999999999999999999999999999999975555555544 999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.+.+.+++.|.+.         .++|+++||..+..+.+++..|+++|+++++|+++++.|+. ++||+++.|+||.
T Consensus       116 ~~~~~~~~~~~~~~~~---------~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~-~~~i~v~~v~pg~  185 (258)
T PRK08628        116 HYYVMAHYCLPHLKAS---------RGAIVNISSKTALTGQGGTSGYAAAKGAQLALTREWAVALA-KDGVRVNAVIPAE  185 (258)
T ss_pred             HHHHHHHHHHHHhhcc---------CcEEEEECCHHhccCCCCCchhHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCc
Confidence            9999999999988754         57899999999998888899999999999999999999998 8899999999999


Q ss_pred             ccCCCCCCCC---C-hHHHHHHhhhhccCC-CCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          162 IKDTAGVSKL---A-PEEIRSKATDYMAAY-KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       162 v~t~~~~~~~---~-~~~~~~~~~~~~~~~-~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      ++|++.....   . ............+.+ ++.+|+|+++.+++++++.+.+++|+.+.+|||.+..
T Consensus       186 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~~~~  253 (258)
T PRK08628        186 VMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLSERSSHTTGQWLFVDGGYVHL  253 (258)
T ss_pred             cCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHHHHhChhhccccCceEEecCCcccc
Confidence            9998643211   1 111122222333443 6789999999999999998889999999999997654

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.7e-29  Score=213.38  Aligned_cols=202  Identities=18%  Similarity=0.164  Sum_probs=172.0

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|++++++++.+++.. +.++..+.||++|.++++++++++.++++++|++|||||+....++.+.+.++|++++++|+
T Consensus        39 ~~r~~~~l~~~~~~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~  117 (296)
T PRK05872         39 VDLEEAELAALAAELGG-DDRVLTVVADVTDLAAMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNL  117 (296)
T ss_pred             EeCCHHHHHHHHHHhcC-CCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHh
Confidence            36888888888887753 45677888999999999999999999999999999999988788899999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .+++++++.++|+|.++         .|+||++||..+..+.+++..|+++|+++++|+++++.|+. ++||++++|+||
T Consensus       118 ~g~~~l~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~Y~asKaal~~~~~~l~~e~~-~~gi~v~~v~Pg  187 (296)
T PRK05872        118 LGVFHTVRATLPALIER---------RGYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALRLEVA-HHGVTVGSAYLS  187 (296)
T ss_pred             HHHHHHHHHHHHHHHHc---------CCEEEEEeCHhhcCCCCCchHHHHHHHHHHHHHHHHHHHHH-HHCcEEEEEecC
Confidence            99999999999999874         58999999999999999999999999999999999999999 899999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhh--ccCCCCCCHHhHHHHHHHhccCCCCcccCc
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDY--MAAYKFGEKWDIAMAALYLASDAGKYVNGN  213 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  213 (257)
                      +++|++.............+...  .+..+..+|+|+++.+++++++...+++|.
T Consensus       188 ~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~i~~~~~~~~~~i~~~  242 (296)
T PRK05872        188 WIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAAAFVDGIERRARRVYAP  242 (296)
T ss_pred             cccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHHHHHHHHhcCCCEEEch
Confidence            99998764432221222222222  245678899999999999998877666554

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.97  E-value=3.1e-29  Score=206.77  Aligned_cols=197  Identities=23%  Similarity=0.331  Sum_probs=172.2

Q ss_pred             CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Q 025124           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (257)
Q Consensus        19 ~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (257)
                      +.++.++++|+++.++++++++++.+.++++|++|||+|.....++.+.+.++++..+++|+.+++.+++++++.|.++.
T Consensus        47 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  126 (252)
T PRK08220         47 DYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQR  126 (252)
T ss_pred             CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC
Confidence            45678899999999999999999999999999999999987777888889999999999999999999999999998865


Q ss_pred             CCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHH---
Q 025124           99 RGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE---  175 (257)
Q Consensus        99 ~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~---  175 (257)
                              .|+|+++||..+..+.++...|+++|+++++|+++++.|+. ++||+++.|+||++.|++.........   
T Consensus       127 --------~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~  197 (252)
T PRK08220        127 --------SGAIVTVGSNAAHVPRIGMAAYGASKAALTSLAKCVGLELA-PYGVRCNVVSPGSTDTDMQRTLWVDEDGEQ  197 (252)
T ss_pred             --------CCEEEEECCchhccCCCCCchhHHHHHHHHHHHHHHHHHhh-HhCeEEEEEecCcCcchhhhhhccchhhhh
Confidence                    68999999999888888889999999999999999999998 899999999999999987533211110   


Q ss_pred             -----HHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          176 -----IRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       176 -----~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                           ....+....+..++.+|+|+++++++|+++...+++|+.+.+|||..+.
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~i~~~gg~~~~  251 (252)
T PRK08220        198 QVIAGFPEQFKLGIPLGKIARPQEIANAVLFLASDLASHITLQDIVVDGGATLG  251 (252)
T ss_pred             hhhhhHHHHHhhcCCCcccCCHHHHHHHHHHHhcchhcCccCcEEEECCCeecC
Confidence                 1123334456778999999999999999998899999999999997653

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=7.1e-29  Score=204.36  Aligned_cols=213  Identities=30%  Similarity=0.416  Sum_probs=184.2

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n   79 (257)
                      ++|+.++++++.+.+.. +.++.++.+|++|.++++.+++++.+.++++|++|||+|... ..++.+.+.++|+..+++|
T Consensus        35 ~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n  113 (251)
T PRK07231         35 TDRNEEAAERVAAEILA-GGRAIAVAADVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVN  113 (251)
T ss_pred             EeCCHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhh
Confidence            36888888888777765 567899999999999999999999999999999999999754 3567788999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.+++.+++.++++|.++.        .++||++||..+..+.++...|+.+|++++.+++.++.++. +.||++++++|
T Consensus       114 ~~~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~y~~sk~~~~~~~~~~a~~~~-~~~i~v~~i~p  184 (251)
T PRK07231        114 VKSPYLWTQAAVPAMRGEG--------GGAIVNVASTAGLRPRPGLGWYNASKGAVITLTKALAAELG-PDKIRVNAVAP  184 (251)
T ss_pred             hHHHHHHHHHHHHHHHhcC--------CcEEEEEcChhhcCCCCCchHHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEE
Confidence            9999999999999998765        68999999999999999999999999999999999999998 88999999999


Q ss_pred             CcccCCCCCCCCCh--HHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          160 GPIKDTAGVSKLAP--EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       160 g~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      |++.|++.......  ......+....+.+++.+|+|++.++++++++...+++|+.+.+|||..+
T Consensus       185 g~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~~~  250 (251)
T PRK07231        185 VVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLASDEASWITGVTLVVDGGRCV  250 (251)
T ss_pred             CccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccCCCCCeEEECCCccC
Confidence            99999875433221  12333344556777889999999999999998888899999999999654

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=1.4e-29  Score=205.40  Aligned_cols=184  Identities=18%  Similarity=0.154  Sum_probs=165.2

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +.|.+..+++++++++.| +++.+.||+|+.+++.+..++++++.|.+|++|||||+....++.+.+.+++++++++|+.
T Consensus        69 Din~~~~~etv~~~~~~g-~~~~y~cdis~~eei~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~  147 (300)
T KOG1201|consen   69 DINKQGNEETVKEIRKIG-EAKAYTCDISDREEIYRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTI  147 (300)
T ss_pred             eccccchHHHHHHHHhcC-ceeEEEecCCCHHHHHHHHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhH
Confidence            456777888999998875 9999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhc--CCCCeEEEEEec
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG--TDYAIRVNGIAP  159 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~--~~~gi~v~~v~P  159 (257)
                      |.|+++++|+|.|.+.+        +|+||.|+|.+|+.+.++-..|++||+|+.+|.++|..|+.  ...||+...|+|
T Consensus       148 ~~f~t~kaFLP~M~~~~--------~GHIV~IaS~aG~~g~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P  219 (300)
T KOG1201|consen  148 AHFWTTKAFLPKMLENN--------NGHIVTIASVAGLFGPAGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCP  219 (300)
T ss_pred             HHHHHHHHHhHHHHhcC--------CceEEEehhhhcccCCccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEee
Confidence            99999999999999988        89999999999999999999999999999999999999985  367899999999


Q ss_pred             CcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhcc
Q 025124          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  204 (257)
Q Consensus       160 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  204 (257)
                      ++++|+|.... .         ....+....+|+.+|+.+...+-
T Consensus       220 ~~i~Tgmf~~~-~---------~~~~l~P~L~p~~va~~Iv~ai~  254 (300)
T KOG1201|consen  220 YFINTGMFDGA-T---------PFPTLAPLLEPEYVAKRIVEAIL  254 (300)
T ss_pred             eeccccccCCC-C---------CCccccCCCCHHHHHHHHHHHHH
Confidence            99998876531 1         11123346799999999988873

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.97  E-value=9.8e-29  Score=202.45  Aligned_cols=208  Identities=26%  Similarity=0.340  Sum_probs=182.8

Q ss_pred             cHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHH
Q 025124            4 RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT   83 (257)
Q Consensus         4 ~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~   83 (257)
                      ++++++++.+++...+.++.++.+|++|+++++++++++.+.++++|++|||+|......+.+.+.++++..+++|+.++
T Consensus        34 ~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~  113 (242)
T TIGR01829        34 NEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSV  113 (242)
T ss_pred             CHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHH
Confidence            66677777777766667899999999999999999999999999999999999987777788889999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccc
Q 025124           84 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK  163 (257)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~  163 (257)
                      +.+++++++.|.+.+        .++|+++||..+..+.+++..|+++|+++..|+++++.++. +.||+++.++||++.
T Consensus       114 ~~~~~~~~~~~~~~~--------~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~~~~~la~~~~-~~~i~v~~i~pg~~~  184 (242)
T TIGR01829       114 FNVTQPVIDGMRERG--------WGRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQEGA-TKGVTVNTISPGYIA  184 (242)
T ss_pred             HHHHHHHHHHHHhcC--------CcEEEEEcchhhcCCCCCcchhHHHHHHHHHHHHHHHHHhh-hhCeEEEEEeeCCCc
Confidence            999999999998865        68999999999888888999999999999999999999998 889999999999999


Q ss_pred             CCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          164 DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       164 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      |++....  .......+....+..++.+|+++++.+.+|+++...+++|+.+.+|||..
T Consensus       185 t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~gg~~  241 (242)
T TIGR01829       185 TDMVMAM--REDVLNSIVAQIPVGRLGRPEEIAAAVAFLASEEAGYITGATLSINGGLY  241 (242)
T ss_pred             Ccccccc--chHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEecCCcc
Confidence            8865322  23333344455677788999999999999999888889999999999964

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.3e-28  Score=205.78  Aligned_cols=219  Identities=26%  Similarity=0.399  Sum_probs=185.9

Q ss_pred             CCcHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEI   78 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~   78 (257)
                      +|+.++++...+.+...  +.++.++.+|++|+++++.+++++.++++++|++|||+|... ..++.+.+.++|+.++++
T Consensus        38 ~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~  117 (276)
T PRK05875         38 GRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDL  117 (276)
T ss_pred             eCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHH
Confidence            67778888877777655  357889999999999999999999999999999999999653 356778899999999999


Q ss_pred             HhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      |+.+++.+++++++.|.++.        .++|+++||..+..+.++.+.|+++|++++.++++++.++. ..+|+++.|+
T Consensus       118 n~~~~~~l~~~~~~~~~~~~--------~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~-~~~i~v~~i~  188 (276)
T PRK05875        118 NVNGTMYVLKHAARELVRGG--------GGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMKLAADELG-PSWVRVNSIR  188 (276)
T ss_pred             hhHHHHHHHHHHHHHHHhcC--------CcEEEEEechhhcCCCCCCcchHHHHHHHHHHHHHHHHHhc-ccCeEEEEEe
Confidence            99999999999999998765        68999999999888888889999999999999999999998 8899999999


Q ss_pred             cCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCC
Q 025124          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDL  229 (257)
Q Consensus       159 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~  229 (257)
                      ||+++|++..................+..++++++|+++++.++++.....++|+++.+++|..+...+..
T Consensus       189 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~  259 (276)
T PRK05875        189 PGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMFLLSDAASWITGQVINVDGGHMLRRGPDF  259 (276)
T ss_pred             cCccCCccccccccCHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCeeccCCccH
Confidence            99999987654333333333334455677889999999999999998888899999999999876443333

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.9e-29  Score=207.96  Aligned_cols=195  Identities=22%  Similarity=0.280  Sum_probs=165.8

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC--CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG   97 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~   97 (257)
                      .++.++.+|++|.++++++++++.+.++++|++|||||...  ..++.+.+.++|++.+++|+.+++.++++++++|.++
T Consensus        49 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  128 (260)
T PRK06523         49 EGVEFVAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIAR  128 (260)
T ss_pred             CceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc
Confidence            35778999999999999999999999999999999999643  3567788999999999999999999999999999986


Q ss_pred             CCCCCCCCCCceEEEEcccccccccc-cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCC-----
Q 025124           98 GRGQASSSSGGIIINISATLHYTATW-YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-----  171 (257)
Q Consensus        98 ~~~~~~~~~~g~ii~iss~~~~~~~~-~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~-----  171 (257)
                      +        .|+||++||..+..+.+ +...|+++|+++++|+++++.++. ++||++++|+||+++|++.....     
T Consensus       129 ~--------~g~ii~isS~~~~~~~~~~~~~Y~~sK~a~~~l~~~~a~~~~-~~gi~v~~i~Pg~v~t~~~~~~~~~~~~  199 (260)
T PRK06523        129 G--------SGVIIHVTSIQRRLPLPESTTAYAAAKAALSTYSKSLSKEVA-PKGVRVNTVSPGWIETEAAVALAERLAE  199 (260)
T ss_pred             C--------CcEEEEEecccccCCCCCCcchhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEecCcccCccHHHHHHHHHh
Confidence            5        68999999998887755 788999999999999999999999 89999999999999998753210     


Q ss_pred             ----ChHHHHHH---hhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          172 ----APEEIRSK---ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       172 ----~~~~~~~~---~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                          ..++....   .....|.+++.+|+|+++.+.||+++.+++++|+.+.+|||...
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg~~~  258 (260)
T PRK06523        200 AAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAELIAFLASDRAASITGTEYVIDGGTVP  258 (260)
T ss_pred             hcCCCHHHHHHHHHHHhccCccCCCCCHHHHHHHHHHHhCcccccccCceEEecCCccC
Confidence                00111111   11235778889999999999999999899999999999999654

>PRK06484 short chain dehydrogenase; Validated

Probab=99.97  E-value=3.1e-29  Score=227.27  Aligned_cols=211  Identities=30%  Similarity=0.411  Sum_probs=179.4

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC--CCCCCCCCHHHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n   79 (257)
                      +|+.++++++.+++   +.++.++.+|++++++++++++++.++++++|++|||||+..  ..++.+.+.++|++++++|
T Consensus        36 ~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n  112 (520)
T PRK06484         36 DRNVERARERADSL---GPDHHALAMDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAIN  112 (520)
T ss_pred             eCCHHHHHHHHHHh---CCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHh
Confidence            67887777766554   567888999999999999999999999999999999999742  3567889999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCc-eEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGG-IIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g-~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      +.+++.++++++|+|.+++        .| +||++||..+..+.+.+..|+++|+++.+|+++++.|+. ++||+|+.|+
T Consensus       113 ~~~~~~l~~~~~~~~~~~~--------~g~~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~-~~~i~v~~i~  183 (520)
T PRK06484        113 LTGAYLVAREALRLMIEQG--------HGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWA-AKGIRVNAVL  183 (520)
T ss_pred             hHHHHHHHHHHHHHHHhcC--------CCCeEEEECCcccCCCCCCCchHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEc
Confidence            9999999999999998754        44 999999999999999999999999999999999999998 8899999999


Q ss_pred             cCcccCCCCCCCCChHH-HHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          159 PGPIKDTAGVSKLAPEE-IRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       159 Pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      ||++.|++......... .........+.+++.+|+++++.+.+++++...+++|+.+.++||....
T Consensus       184 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~v~~l~~~~~~~~~G~~~~~~gg~~~~  250 (520)
T PRK06484        184 PGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLASDQASYITGSTLVVDGGWTVY  250 (520)
T ss_pred             cCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCceEEecCCeecc
Confidence            99999987543211111 1122334456677889999999999999998899999999999997544

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.97  E-value=8.3e-29  Score=203.23  Aligned_cols=208  Identities=25%  Similarity=0.309  Sum_probs=177.8

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.+.+   +.++.++.+|+++.++++.+++++.+.++++|++|||+|.....++.+.+.++|+..+++|+.
T Consensus        37 ~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~  113 (245)
T PRK12936         37 GTRVEKLEALAAEL---GERVKIFPANLSDRDEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLT  113 (245)
T ss_pred             cCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccH
Confidence            46666776655443   457889999999999999999999999999999999999877777888899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.+++++.+.+.+++        .++||++||..+..+.+....|+++|+++.++++.++.++. +.|+++++|+||+
T Consensus       114 ~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~Y~~sk~a~~~~~~~la~~~~-~~~i~v~~i~pg~  184 (245)
T PRK12936        114 ATFRLTRELTHPMMRRR--------YGRIINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIA-TRNVTVNCVAPGF  184 (245)
T ss_pred             HHHHHHHHHHHHHHHhC--------CCEEEEECCHHhCcCCCCCcchHHHHHHHHHHHHHHHHHhh-HhCeEEEEEEECc
Confidence            99999999999887765        68999999999988988999999999999999999999998 8899999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ++|++....  .....+......+..++.+|+|+++.+.+++++...+++|+.+.+|||+.+
T Consensus       185 ~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~~~~~~~~~G~~~~~~~g~~~  244 (245)
T PRK12936        185 IESAMTGKL--NDKQKEAIMGAIPMKRMGTGAEVASAVAYLASSEAAYVTGQTIHVNGGMAM  244 (245)
T ss_pred             CcCchhccc--ChHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCcCCCEEEECCCccc
Confidence            998764322  122222233455677888999999999999998888899999999999754

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.2e-28  Score=203.22  Aligned_cols=213  Identities=30%  Similarity=0.438  Sum_probs=183.0

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|+.+.+++..+.+. .+.++.++.+|++|+++++++++++.++++++|++|||+|......+.+.+.++++..+++|+
T Consensus        35 ~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~  113 (252)
T PRK06138         35 ADRDAEAAERVAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNV  113 (252)
T ss_pred             ecCCHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhh
Confidence            3678888877777776 466789999999999999999999999999999999999987777788889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .+++.+++.+++.|++.+        .++|+++||..+..+.++...|+++|++++.++++++.|+. +.||++++++||
T Consensus       114 ~~~~~l~~~~~~~~~~~~--------~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~pg  184 (252)
T PRK06138        114 GGVFLWAKYAIPIMQRQG--------GGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHA-TDGIRVNAVAPG  184 (252)
T ss_pred             hhHHHHHHHHHHHHHhcC--------CeEEEEECChhhccCCCCccHHHHHHHHHHHHHHHHHHHHH-hcCeEEEEEEEC
Confidence            999999999999998866        68999999999988888899999999999999999999998 889999999999


Q ss_pred             cccCCCCCCCCC----hHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          161 PIKDTAGVSKLA----PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       161 ~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ++.|++....+.    ............+..++.+++|+++.+++++.+...+++|..+.++||+++
T Consensus       185 ~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~  251 (252)
T PRK06138        185 TIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLASDESSFATGTTLVVDGGWLA  251 (252)
T ss_pred             CccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCeec
Confidence            999887543221    122222222334555688999999999999998888899999999999654

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.1e-28  Score=204.44  Aligned_cols=214  Identities=27%  Similarity=0.352  Sum_probs=183.3

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|+.++++.+.+++.+.+.++.++.+|+++++++.++++.+.+.++++|++|||+|......+.+.+.++|+..+++|+
T Consensus        37 ~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~  116 (260)
T PRK06198         37 CGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNV  116 (260)
T ss_pred             EcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhh
Confidence            36777888888888877777889999999999999999999999999999999999987777788899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .+++.+++++++.|.++..       .|+++++||..+..+.++...|+++|+++++|+++++.|+. ..||+++.|+||
T Consensus       117 ~~~~~~~~~~~~~~~~~~~-------~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~-~~~i~v~~i~pg  188 (260)
T PRK06198        117 RAPFFLMQEAIKLMRRRKA-------EGTIVNIGSMSAHGGQPFLAAYCASKGALATLTRNAAYALL-RNRIRVNGLNIG  188 (260)
T ss_pred             HHHHHHHHHHHHHHHhcCC-------CCEEEEECCcccccCCCCcchhHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeec
Confidence            9999999999999987531       48899999999888888889999999999999999999998 889999999999


Q ss_pred             cccCCCCCC---CC--ChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          161 PIKDTAGVS---KL--APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       161 ~v~t~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      ++.|++...   .+  .............+.+++.+++|+++.+.+++++..++++|+.+.+|+|.+
T Consensus       189 ~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~~~~~  255 (260)
T PRK06198        189 WMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFLLSDESGLMTGSVIDFDQSVW  255 (260)
T ss_pred             cccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHHHHHHHHHHcChhhCCccCceEeECCccc
Confidence            999986421   10  111222333344566778999999999999999888899999999999843

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.6e-28  Score=202.85  Aligned_cols=211  Identities=29%  Similarity=0.370  Sum_probs=181.7

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHh------CCccEEEeCCCCCCCCCCCCCCHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF------GKLDILVNAAAGNFLVPAEDLSPNGFRTV   75 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~------g~id~li~~ag~~~~~~~~~~~~~~~~~~   75 (257)
                      +|+.+++++..+.+...+.+++++.+|++|++++..+++++.+++      +++|++|||+|......+.+.+.+.|+..
T Consensus        38 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~  117 (254)
T PRK12746         38 GRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEI  117 (254)
T ss_pred             CCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHH
Confidence            578888888888887666789999999999999999999999887      47999999999877777888899999999


Q ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEE
Q 025124           76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN  155 (257)
Q Consensus        76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~  155 (257)
                      +++|+.+++.+++.+++.|.+          .+++|++||..+..+.+++..|+++|++++.|+++++.++. +.|++++
T Consensus       118 ~~~n~~~~~~l~~~~~~~~~~----------~~~~v~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~-~~~i~v~  186 (254)
T PRK12746        118 MAVNIKAPFFLIQQTLPLLRA----------EGRVINISSAEVRLGFTGSIAYGLSKGALNTMTLPLAKHLG-ERGITVN  186 (254)
T ss_pred             HHHHhHHHHHHHHHHHHHhhc----------CCEEEEECCHHhcCCCCCCcchHhhHHHHHHHHHHHHHHHh-hcCcEEE
Confidence            999999999999999999864          46899999999888888999999999999999999999998 8899999


Q ss_pred             EEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          156 GIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       156 ~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      .++||+++|++....................++..+++|+++.+.+++++.+.+++|..+.+++|+++
T Consensus       187 ~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~~~~~  254 (254)
T PRK12746        187 TIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAVAFLASSDSRWVTGQIIDVSGGFCL  254 (254)
T ss_pred             EEEECCccCcchhhhccChhHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcccCCcCCCEEEeCCCccC
Confidence            99999999987654333333333333445567788999999999999988777889999999998653

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.97  E-value=7e-29  Score=212.07  Aligned_cols=192  Identities=20%  Similarity=0.233  Sum_probs=167.3

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|++++++++.+++.+.+.++.++.+|++|.++++++++++.+.++++|++|||||+....++.+.+.++|++.+++|+
T Consensus        37 ~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~  116 (330)
T PRK06139         37 AARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNL  116 (330)
T ss_pred             EECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhh
Confidence            36899999999999988888899999999999999999999999999999999999988888899999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCC-CCeEEEEEec
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAP  159 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~-~gi~v~~v~P  159 (257)
                      .+++.+++.++|+|+++.        .|+||+++|..+..+.++++.|+++|+|+.+|+++++.|+. + .||+|++|+|
T Consensus       117 ~g~~~~~~~~lp~~~~~~--------~g~iV~isS~~~~~~~p~~~~Y~asKaal~~~~~sL~~El~-~~~gI~V~~v~P  187 (330)
T PRK06139        117 IGYMRDAHAALPIFKKQG--------HGIFINMISLGGFAAQPYAAAYSASKFGLRGFSEALRGELA-DHPDIHVCDVYP  187 (330)
T ss_pred             HHHHHHHHHHHHHHHHcC--------CCEEEEEcChhhcCCCCCchhHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEec
Confidence            999999999999999876        68999999999999999999999999999999999999998 6 4999999999


Q ss_pred             CcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCC
Q 025124          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (257)
Q Consensus       160 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  206 (257)
                      |+++|++........     .....+.....+|+++|+.+++++...
T Consensus       188 g~v~T~~~~~~~~~~-----~~~~~~~~~~~~pe~vA~~il~~~~~~  229 (330)
T PRK06139        188 AFMDTPGFRHGANYT-----GRRLTPPPPVYDPRRVAKAVVRLADRP  229 (330)
T ss_pred             CCccCcccccccccc-----cccccCCCCCCCHHHHHHHHHHHHhCC
Confidence            999998754321100     001112234679999999999999643

>PRK09186 flagellin modification protein A; Provisional

Probab=99.97  E-value=1.5e-28  Score=203.22  Aligned_cols=206  Identities=27%  Similarity=0.343  Sum_probs=171.9

Q ss_pred             CCcHHHHHHHHHHHHhc-C-CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC---CCCCCCCCHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSL-G-IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF---LVPAEDLSPNGFRTVI   76 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~-~-~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~---~~~~~~~~~~~~~~~~   76 (257)
                      +|++++++++.+++... + ..+.++.||++|++++.++++++.+.++++|++|||||...   ..++.+.+.+.|+..+
T Consensus        35 ~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~  114 (256)
T PRK09186         35 DIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENL  114 (256)
T ss_pred             ecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHH
Confidence            67888888888888543 2 34667899999999999999999999999999999998532   3567889999999999


Q ss_pred             HHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccc----------cchhhHHHHHHHHHHHHHHHHHh
Q 025124           77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW----------YQIHVSAAKAAVDSITRSLALEW  146 (257)
Q Consensus        77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~----------~~~~Y~~sK~a~~~l~~~la~e~  146 (257)
                      ++|+.+++.++++++++|++++        .++||++||..+..+..          ....|+++|+++++|+++++.|+
T Consensus       115 ~~n~~~~~~~~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~  186 (256)
T PRK09186        115 SLHLGSSFLFSQQFAKYFKKQG--------GGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAGIIHLTKYLAKYF  186 (256)
T ss_pred             HHhhhhHHHHHHHHHHHHHhcC--------CceEEEEechhhhccccchhccccccCCcchhHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999998776        68999999987654321          22469999999999999999999


Q ss_pred             cCCCCeEEEEEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          147 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       147 ~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      . ++||+++.|+||.+.++.      .......+....+..++.+|+|+|+.+++++++.+.+++|+.+.+|||+.
T Consensus       187 ~-~~~i~v~~i~Pg~~~~~~------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~  255 (256)
T PRK09186        187 K-DSNIRVNCVSPGGILDNQ------PEAFLNAYKKCCNGKGMLDPDDICGTLVFLLSDQSKYITGQNIIVDDGFS  255 (256)
T ss_pred             C-cCCeEEEEEecccccCCC------CHHHHHHHHhcCCccCCCCHHHhhhhHhheeccccccccCceEEecCCcc
Confidence            8 899999999999998653      12233333344456678999999999999999888899999999999964

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.97  E-value=2.3e-28  Score=202.14  Aligned_cols=214  Identities=29%  Similarity=0.374  Sum_probs=185.7

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|+.++++++.+++.+.+.+++++.||++|+++++.+++++.+.++++|++|||+|......+.+.+.++++..+++|+
T Consensus        34 ~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~  113 (258)
T PRK12429         34 ADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIML  113 (258)
T ss_pred             EeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcc
Confidence            36888889998888887778899999999999999999999999999999999999987777888889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .+++.+++.+++.|.++.        .++||++||..+..+.++.+.|+++|+++++|++.++.|+. +.||+++.++||
T Consensus       114 ~~~~~l~~~~~~~~~~~~--------~~~iv~iss~~~~~~~~~~~~y~~~k~a~~~~~~~l~~~~~-~~~i~v~~~~pg  184 (258)
T PRK12429        114 DGAFLTTKAALPIMKAQG--------GGRIINMASVHGLVGSAGKAAYVSAKHGLIGLTKVVALEGA-THGVTVNAICPG  184 (258)
T ss_pred             hhhHHHHHHHHHHHHhcC--------CeEEEEEcchhhccCCCCcchhHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecC
Confidence            999999999999999876        68999999999999999999999999999999999999998 889999999999


Q ss_pred             cccCCCCCCCCC---------hH-HHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          161 PIKDTAGVSKLA---------PE-EIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       161 ~v~t~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +++|++......         .. .....+....+..++.+++|+++.+.+++.+....++|+.+.+|||++.
T Consensus       185 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~  257 (258)
T PRK12429        185 YVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLASFAAKGVTGQAWVVDGGWTA  257 (258)
T ss_pred             CCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHHHHHHHHHHcCccccCccCCeEEeCCCEec
Confidence            999886532211         01 1112233334556789999999999999988777889999999999754

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.97  E-value=1.7e-28  Score=203.41  Aligned_cols=213  Identities=22%  Similarity=0.321  Sum_probs=182.1

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|++++++++.+.+.+.+.++.++.+|++|.++++.+++++.++++++|++|||+|.....++.+.+.++++..+++|+.
T Consensus        38 ~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~  117 (262)
T PRK13394         38 DLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVD  117 (262)
T ss_pred             eCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhh
Confidence            68888888888888877778999999999999999999999999999999999999877777778899999999999999


Q ss_pred             HHHHHHHHHHHHH-HhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           82 GTFIMCHEALKYL-KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        82 ~~~~l~~~~~~~~-~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      +++.+++.+++.| ++.+        .++||++||..+..+.+....|+++|+++++++++++.++. +.+|+++.|+||
T Consensus       118 ~~~~~~~~~l~~~~~~~~--------~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~~~~~~la~~~~-~~~i~v~~v~pg  188 (262)
T PRK13394        118 GAFLTTKAALKHMYKDDR--------GGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGA-KHNVRSHVVCPG  188 (262)
T ss_pred             hHHHHHHHHHHHHHhhcC--------CcEEEEEcchhhcCCCCCCcccHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeC
Confidence            9999999999999 5544        68999999998888888889999999999999999999998 889999999999


Q ss_pred             cccCCCCCCCCCh---------HH-HHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          161 PIKDTAGVSKLAP---------EE-IRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       161 ~v~t~~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +++|++....+..         .+ ....+....+...+.+++|++++++++++.....++|+.+.+|+|+.+
T Consensus       189 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~g~~~  261 (262)
T PRK13394        189 FVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSHGWFM  261 (262)
T ss_pred             cccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHcCccccCCcCCEEeeCCceec
Confidence            9998864322211         11 111222344556789999999999999987777899999999999653

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.6e-28  Score=199.65  Aligned_cols=189  Identities=16%  Similarity=0.223  Sum_probs=160.2

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC-CccEEEeCCCCC-CCCCCCCCCHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG-KLDILVNAAAGN-FLVPAEDLSPNGFRTVIEI   78 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g-~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~   78 (257)
                      ++|++++++++.+++.+.+.++..+.+|++++++++++++++.++++ +||++|||+|.. ...++.+.+.++|.+.+++
T Consensus        35 ~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~  114 (227)
T PRK08862         35 CDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSS  114 (227)
T ss_pred             EcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHH
Confidence            47899999999999988777888999999999999999999999999 999999999854 4467888999999999999


Q ss_pred             HhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      |+.+++.+++.++|+|.++++       +|.||++||..+.   +++..|+++|+|+.+|+++++.|+. ++||||++|+
T Consensus       115 ~~~~~~~~~~~~~~~m~~~~~-------~g~Iv~isS~~~~---~~~~~Y~asKaal~~~~~~la~el~-~~~Irvn~v~  183 (227)
T PRK08862        115 LASTLFTYGQVAAERMRKRNK-------KGVIVNVISHDDH---QDLTGVESSNALVSGFTHSWAKELT-PFNIRVGGVV  183 (227)
T ss_pred             hhHHHHHHHHHHHHHHHhcCC-------CceEEEEecCCCC---CCcchhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEe
Confidence            999999999999999987531       5899999997543   5578899999999999999999999 8999999999


Q ss_pred             cCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEe
Q 025124          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIV  217 (257)
Q Consensus       159 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~  217 (257)
                      ||++.|+...   .+..+.+ .           -+|++.+..||++  +.+++|..+.-
T Consensus       184 PG~i~t~~~~---~~~~~~~-~-----------~~~~~~~~~~l~~--~~~~tg~~~~~  225 (227)
T PRK08862        184 PSIFSANGEL---DAVHWAE-I-----------QDELIRNTEYIVA--NEYFSGRVVEA  225 (227)
T ss_pred             cCcCcCCCcc---CHHHHHH-H-----------HHHHHhheeEEEe--cccccceEEee
Confidence            9999987321   1111111 0           1799999999996  67899988753

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.9e-28  Score=204.61  Aligned_cols=197  Identities=27%  Similarity=0.313  Sum_probs=169.0

Q ss_pred             HHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHH
Q 025124            7 VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM   86 (257)
Q Consensus         7 ~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l   86 (257)
                      +++++.+++.+.+.++.++.+|+++.+++..+++++.+.++++|++|||+|.....++.+.+.++|++++++|+.+++.+
T Consensus        49 ~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l  128 (273)
T PRK08278         49 TIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLV  128 (273)
T ss_pred             HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHH
Confidence            36677777877778899999999999999999999999999999999999987777888899999999999999999999


Q ss_pred             HHHHHHHHHhcCCCCCCCCCCceEEEEccccccccc--ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC-ccc
Q 025124           87 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG-PIK  163 (257)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~--~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg-~v~  163 (257)
                      ++++++.|.++.        .|+|+++||..+..+.  +++..|+++|+++++|+++++.|+. ++||+|++|+|| ++.
T Consensus       129 ~~~~~~~~~~~~--------~g~iv~iss~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~-~~~I~v~~i~Pg~~i~  199 (273)
T PRK08278        129 SQACLPHLKKSE--------NPHILTLSPPLNLDPKWFAPHTAYTMAKYGMSLCTLGLAEEFR-DDGIAVNALWPRTTIA  199 (273)
T ss_pred             HHHHHHHHHhcC--------CCEEEEECCchhccccccCCcchhHHHHHHHHHHHHHHHHHhh-hcCcEEEEEeCCCccc
Confidence            999999998865        6899999998877776  7788999999999999999999999 899999999999 577


Q ss_pred             CCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          164 DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       164 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      |++......         ...+..+..+|+++++.+++++++...+++|+.+ .|++..
T Consensus       200 t~~~~~~~~---------~~~~~~~~~~p~~va~~~~~l~~~~~~~~~G~~~-~~~~~~  248 (273)
T PRK08278        200 TAAVRNLLG---------GDEAMRRSRTPEIMADAAYEILSRPAREFTGNFL-IDEEVL  248 (273)
T ss_pred             cHHHHhccc---------ccccccccCCHHHHHHHHHHHhcCccccceeEEE-eccchh
Confidence            653221110         1123456789999999999999988888999877 566643

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1e-28  Score=200.35  Aligned_cols=184  Identities=22%  Similarity=0.235  Sum_probs=150.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC------CCCCCCCHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL------VPAEDLSPNGFRTV   75 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~------~~~~~~~~~~~~~~   75 (257)
                      +|+.++++++.+++     ++.++++|++|+++++++++++.+   ++|++|||+|....      ..+.+ +.++|+++
T Consensus        31 ~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~---~id~lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~  101 (223)
T PRK05884         31 GARRDDLEVAAKEL-----DVDAIVCDNTDPASLEEARGLFPH---HLDTIVNVPAPSWDAGDPRTYSLAD-TANAWRNA  101 (223)
T ss_pred             eCCHHHHHHHHHhc-----cCcEEecCCCCHHHHHHHHHHHhh---cCcEEEECCCccccCCCCcccchhc-CHHHHHHH
Confidence            57777777666554     356789999999999999887753   69999999984321      12334 57899999


Q ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEE
Q 025124           76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN  155 (257)
Q Consensus        76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~  155 (257)
                      +++|+.+++.++++++|.|.+          .|+||++||..    .+....|+++|+|+.+|+++++.|+. ++||+|+
T Consensus       102 ~~~N~~~~~~~~~~~~~~~~~----------~g~Iv~isS~~----~~~~~~Y~asKaal~~~~~~la~e~~-~~gI~v~  166 (223)
T PRK05884        102 LDATVLSAVLTVQSVGDHLRS----------GGSIISVVPEN----PPAGSAEAAIKAALSNWTAGQAAVFG-TRGITIN  166 (223)
T ss_pred             HHHHHHHHHHHHHHHHHHhhc----------CCeEEEEecCC----CCCccccHHHHHHHHHHHHHHHHHhh-hcCeEEE
Confidence            999999999999999999964          58899999975    34567899999999999999999999 8999999


Q ss_pred             EEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          156 GIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       156 ~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +|+||+++|++...          . ...|   ..+|+|+++.+.||+++.+.+++|+.+.+|||...
T Consensus       167 ~v~PG~v~t~~~~~----------~-~~~p---~~~~~~ia~~~~~l~s~~~~~v~G~~i~vdgg~~~  220 (223)
T PRK05884        167 AVACGRSVQPGYDG----------L-SRTP---PPVAAEIARLALFLTTPAARHITGQTLHVSHGALA  220 (223)
T ss_pred             EEecCccCchhhhh----------c-cCCC---CCCHHHHHHHHHHHcCchhhccCCcEEEeCCCeec
Confidence            99999999875311          0 1122   24899999999999999999999999999999754

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=1.6e-28  Score=200.58  Aligned_cols=188  Identities=26%  Similarity=0.359  Sum_probs=161.1

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      ++.++.+|++++      ++++.+.++++|++|||+|... ..++.+.+.++|++.+++|+.+++.+++++++.|.+++ 
T Consensus        46 ~~~~~~~D~~~~------~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-  118 (235)
T PRK06550         46 NFHFLQLDLSDD------LEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERK-  118 (235)
T ss_pred             cEEEEECChHHH------HHHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-
Confidence            466788999877      5556666789999999999753 35677889999999999999999999999999998866 


Q ss_pred             CCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHHHH
Q 025124          100 GQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK  179 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~  179 (257)
                             .|+||++||..+..+.++...|+++|+++++|+++++.|+. ++||++++|+||+++|++....+........
T Consensus       119 -------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~-~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~  190 (235)
T PRK06550        119 -------SGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYA-KDGIQVFGIAPGAVKTPMTAADFEPGGLADW  190 (235)
T ss_pred             -------CcEEEEEcChhhccCCCCCcccHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCCccCcccccccCchHHHHH
Confidence                   68999999999988888899999999999999999999998 8899999999999999875433333333334


Q ss_pred             hhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          180 ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       180 ~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      .....+.+++.+|+|+|+.+++++++.+.+++|+++.+|||+.+
T Consensus       191 ~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~g~~~~~~gg~~~  234 (235)
T PRK06550        191 VARETPIKRWAEPEEVAELTLFLASGKADYMQGTIVPIDGGWTL  234 (235)
T ss_pred             HhccCCcCCCCCHHHHHHHHHHHcChhhccCCCcEEEECCceec
Confidence            44566788899999999999999998888999999999999654

>PRK12742 oxidoreductase; Provisional

Probab=99.97  E-value=4.4e-28  Score=198.10  Aligned_cols=196  Identities=24%  Similarity=0.331  Sum_probs=162.2

Q ss_pred             cHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHH
Q 025124            4 RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT   83 (257)
Q Consensus         4 ~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~   83 (257)
                      +.++++++.+++     .+.++.+|++|.+++.++++    .++++|++|||+|........+.+.++|+..+++|+.++
T Consensus        40 ~~~~~~~l~~~~-----~~~~~~~D~~~~~~~~~~~~----~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~  110 (237)
T PRK12742         40 SKDAAERLAQET-----GATAVQTDSADRDAVIDVVR----KSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAP  110 (237)
T ss_pred             CHHHHHHHHHHh-----CCeEEecCCCCHHHHHHHHH----HhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHH
Confidence            445555544332     35678899999998877764    357899999999987667777889999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccc-cccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcc
Q 025124           84 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (257)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~-~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v  162 (257)
                      +.+++++.+.|.+          .|+||++||..+. .+.++...|+++|+++++++++++.++. ++||+|++|+||++
T Consensus       111 ~~l~~~~~~~~~~----------~g~iv~isS~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~~~~-~~gi~v~~v~Pg~~  179 (237)
T PRK12742        111 YHASVEAARQMPE----------GGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFG-PRGITINVVQPGPI  179 (237)
T ss_pred             HHHHHHHHHHHhc----------CCeEEEEeccccccCCCCCCcchHHhHHHHHHHHHHHHHHHh-hhCeEEEEEecCcc
Confidence            9999999999864          5789999998774 5677889999999999999999999998 89999999999999


Q ss_pred             cCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          163 KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       163 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      +|++.....   ...+......+++++.+|+|+++.+.||+++.+++++|+.+.+|||+.
T Consensus       180 ~t~~~~~~~---~~~~~~~~~~~~~~~~~p~~~a~~~~~l~s~~~~~~~G~~~~~dgg~~  236 (237)
T PRK12742        180 DTDANPANG---PMKDMMHSFMAIKRHGRPEEVAGMVAWLAGPEASFVTGAMHTIDGAFG  236 (237)
T ss_pred             cCCcccccc---HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCcccCCEEEeCCCcC
Confidence            998753221   122233344567888999999999999999999999999999999953

>PLN00015 protochlorophyllide reductase

Probab=99.96  E-value=2.7e-28  Score=207.06  Aligned_cols=213  Identities=14%  Similarity=0.079  Sum_probs=167.7

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHHh
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~   80 (257)
                      +|+.++++++.+++...+.++.++.+|++|.++++++++++.+.+++||++|||||+... .++.+.+.++|+.++++|+
T Consensus        29 ~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~  108 (308)
T PLN00015         29 CRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNH  108 (308)
T ss_pred             eCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHh
Confidence            688888888888876555678899999999999999999999888999999999997543 3567789999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccc-----------------------------------cccc
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-----------------------------------TWYQ  125 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~-----------------------------------~~~~  125 (257)
                      .|++.++++++|.|.+++.      ..|+||++||..+..+                                   ..++
T Consensus       109 ~g~~~l~~~~lp~l~~~~~------~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (308)
T PLN00015        109 LGHFLLSRLLLDDLKKSDY------PSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGLNSSAMIDGGEFDGA  182 (308)
T ss_pred             HHHHHHHHHHHHHHHhCCC------CCCEEEEEeccccccccccccCCCccchhhhhhhhcccCCccchhhccccCCcHH
Confidence            9999999999999987530      0378999999866421                                   1245


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcc-cCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhcc
Q 025124          126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI-KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  204 (257)
Q Consensus       126 ~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  204 (257)
                      ..|++||+|...+++.+++++....||++++|+||++ .|++..................+.+++.+|++.|+.++++++
T Consensus       183 ~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~l~~  262 (308)
T PLN00015        183 KAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVS  262 (308)
T ss_pred             HHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHHHHHHHHHhcccccHHHhhhhhhhhcc
Confidence            6799999998899999999996236999999999999 577653321111100011122344567899999999999999


Q ss_pred             CCCCcccCcEEEecCC
Q 025124          205 DAGKYVNGNTLIVDGG  220 (257)
Q Consensus       205 ~~~~~~~G~~~~~dgg  220 (257)
                      +.....+|..+..+|+
T Consensus       263 ~~~~~~~G~~~~~~g~  278 (308)
T PLN00015        263 DPSLTKSGVYWSWNGG  278 (308)
T ss_pred             ccccCCCccccccCCc
Confidence            8777789999988876

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=9.9e-28  Score=197.68  Aligned_cols=209  Identities=30%  Similarity=0.402  Sum_probs=176.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCC--------C-CCCCHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP--------A-EDLSPNGF   72 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~--------~-~~~~~~~~   72 (257)
                      +|+++++++..+++...+.++.++.+|+++.++++++++.+.+.++++|++|||+|......        + .+.+.++|
T Consensus        36 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~  115 (253)
T PRK08217         36 DLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQF  115 (253)
T ss_pred             eCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHH
Confidence            67888888888888877788999999999999999999999998899999999999654322        2 67788999


Q ss_pred             HHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCe
Q 025124           73 RTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAI  152 (257)
Q Consensus        73 ~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi  152 (257)
                      +.++++|+.+++.+.+.+++.|.++..       .+.|+++||.. ..+.++.+.|+++|+|+++|+++++.++. ++||
T Consensus       116 ~~~~~~n~~~~~~~~~~~~~~l~~~~~-------~~~iv~~ss~~-~~~~~~~~~Y~~sK~a~~~l~~~la~~~~-~~~i  186 (253)
T PRK08217        116 QSVIDVNLTGVFLCGREAAAKMIESGS-------KGVIINISSIA-RAGNMGQTNYSASKAGVAAMTVTWAKELA-RYGI  186 (253)
T ss_pred             HHHHhhhhHHHHHHHHHHHHHHHhcCC-------CeEEEEEcccc-ccCCCCCchhHHHHHHHHHHHHHHHHHHH-HcCc
Confidence            999999999999999999999987531       57899998864 45777889999999999999999999998 8899


Q ss_pred             EEEEEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          153 RVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       153 ~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ++++++||++.|++....  .+.....+....+..++.+++|+++.+.++++  ..+++|+.+.++||+.+
T Consensus       187 ~v~~v~pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~--~~~~~g~~~~~~gg~~~  253 (253)
T PRK08217        187 RVAAIAPGVIETEMTAAM--KPEALERLEKMIPVGRLGEPEEIAHTVRFIIE--NDYVTGRVLEIDGGLRL  253 (253)
T ss_pred             EEEEEeeCCCcCcccccc--CHHHHHHHHhcCCcCCCcCHHHHHHHHHHHHc--CCCcCCcEEEeCCCccC
Confidence            999999999998875332  23334444555677788999999999999995  35789999999999753

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.96  E-value=4.9e-28  Score=200.15  Aligned_cols=207  Identities=23%  Similarity=0.356  Sum_probs=171.8

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC--CCCCCCCHHHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL--VPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n   79 (257)
                      +|+..++++..+++.     ..++.+|++++++++++++++.+.++++|++|||+|...+  .++.+.+.+.|+..+++|
T Consensus        38 ~r~~~~~~~~~~~~~-----~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n  112 (255)
T PRK06057         38 DIDPEAGKAAADEVG-----GLFVPTDVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVN  112 (255)
T ss_pred             eCCHHHHHHHHHHcC-----CcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHh
Confidence            567766666555442     2578999999999999999999999999999999997543  456788999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccccc-ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~-~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      +.+++.+++.++++|.++.        .|+||++||..+..+. ++...|+++|++++++++.++.++. +.||++++|+
T Consensus       113 ~~~~~~l~~~~~~~l~~~~--------~g~iv~~sS~~~~~g~~~~~~~Y~~sKaal~~~~~~l~~~~~-~~gi~v~~i~  183 (255)
T PRK06057        113 LTSVYLCCKAALPHMVRQG--------KGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQFA-RQGIRVNALC  183 (255)
T ss_pred             cHHHHHHHHHHHHHHHHhC--------CcEEEEEcchhhccCCCCCCcchHHHHHHHHHHHHHHHHHHH-hhCcEEEEEe
Confidence            9999999999999998765        6899999998776665 3677899999999999999999998 8899999999


Q ss_pred             cCcccCCCCCCCCC-hHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          159 PGPIKDTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       159 Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      ||+++|++...... ............+.+++.+|+|+++++.+|+++.+.+++|+.+.+|||..
T Consensus       184 pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~~g~~  248 (255)
T PRK06057        184 PGPVNTPLLQELFAKDPERAARRLVHVPMGRFAEPEEIAAAVAFLASDDASFITASTFLVDGGIS  248 (255)
T ss_pred             eCCcCCchhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEECCCee
Confidence            99999987543322 11111222234567788999999999999999989999999999999964

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.7e-27  Score=196.07  Aligned_cols=205  Identities=23%  Similarity=0.330  Sum_probs=173.1

Q ss_pred             CcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHH
Q 025124            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG   82 (257)
Q Consensus         3 r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~   82 (257)
                      |+.+.++++.+++...+.+++++.+|++|.+++.++++++.+.++++|++|||||.....++.+.+.++|++++++|+.+
T Consensus        42 ~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~  121 (258)
T PRK09134         42 RSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRA  121 (258)
T ss_pred             CCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHH
Confidence            45667777888887777789999999999999999999999999999999999998777778889999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcc
Q 025124           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (257)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v  162 (257)
                      ++.+++++.+.|.++.        .++|++++|..+..+.+.+..|+++|+++++++++++.++. +. |++++|+||++
T Consensus       122 ~~~l~~~~~~~~~~~~--------~~~iv~~~s~~~~~~~p~~~~Y~~sK~a~~~~~~~la~~~~-~~-i~v~~i~PG~v  191 (258)
T PRK09134        122 PFVLAQAFARALPADA--------RGLVVNMIDQRVWNLNPDFLSYTLSKAALWTATRTLAQALA-PR-IRVNAIGPGPT  191 (258)
T ss_pred             HHHHHHHHHHHHHhcC--------CceEEEECchhhcCCCCCchHHHHHHHHHHHHHHHHHHHhc-CC-cEEEEeecccc
Confidence            9999999999998765        68899999987777777788999999999999999999986 54 99999999999


Q ss_pred             cCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          163 KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       163 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      .|....   ....+ .......+.++..+++|+|++++++++.  .+++|+.+.++||..+
T Consensus       192 ~t~~~~---~~~~~-~~~~~~~~~~~~~~~~d~a~~~~~~~~~--~~~~g~~~~i~gg~~~  246 (258)
T PRK09134        192 LPSGRQ---SPEDF-ARQHAATPLGRGSTPEEIAAAVRYLLDA--PSVTGQMIAVDGGQHL  246 (258)
T ss_pred             cCCccc---ChHHH-HHHHhcCCCCCCcCHHHHHHHHHHHhcC--CCcCCCEEEECCCeec
Confidence            875321   11222 2223344566778999999999999974  5689999999999744

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.96  E-value=2.2e-27  Score=194.98  Aligned_cols=212  Identities=25%  Similarity=0.341  Sum_probs=179.7

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC-CCCCCCCCCHHHHHHHHHHHh
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      .|+.+++++...++...+.++..+.+|++|+++++++++++.+.++++|++|||+|.. ...++.+.+.++|+..+++|+
T Consensus        33 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~  112 (247)
T PRK09730         33 QQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNV  112 (247)
T ss_pred             CCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhh
Confidence            4777888888888887777889999999999999999999999999999999999975 446678889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccccccc-chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~-~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      .+++.+++++++.|.++..+.     .|+||++||..+..+.+. +..|+++|++++.++++++.++. +.||++++++|
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~~-----~g~~v~~sS~~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~-~~~i~v~~i~p  186 (247)
T PRK09730        113 TGYFLCCREAVKRMALKHGGS-----GGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTTGLSLEVA-AQGIRVNCVRP  186 (247)
T ss_pred             HHHHHHHHHHHHHHHhcCCCC-----CcEEEEECchhhccCCCCcccchHhHHHHHHHHHHHHHHHHH-HhCeEEEEEEe
Confidence            999999999999998764211     588999999988887775 46899999999999999999998 88999999999


Q ss_pred             CcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCC
Q 025124          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG  220 (257)
Q Consensus       160 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg  220 (257)
                      |+++|++...... ...........+..+..+++|+++.+++++++...+++|+.+.++||
T Consensus       187 g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g~  246 (247)
T PRK09730        187 GFIYTEMHASGGE-PGRVDRVKSNIPMQRGGQPEEVAQAIVWLLSDKASYVTGSFIDLAGG  246 (247)
T ss_pred             CCCcCcccccCCC-HHHHHHHHhcCCCCCCcCHHHHHHHHHhhcChhhcCccCcEEecCCC
Confidence            9999986543322 22223334445666777999999999999998778899999999997

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.1e-27  Score=195.56  Aligned_cols=210  Identities=28%  Similarity=0.404  Sum_probs=178.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC---CCCCCCCCHHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF---LVPAEDLSPNGFRTVIEI   78 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~---~~~~~~~~~~~~~~~~~~   78 (257)
                      +|+.+.++.+.+++.+.+.+++++.+|+++.++++.+++++.+.++++|+||||+|...   ..++.+.+.++|++.+++
T Consensus        37 ~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~  116 (250)
T PRK07774         37 DINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSV  116 (250)
T ss_pred             eCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhh
Confidence            67777888888888766667889999999999999999999999999999999999753   356678899999999999


Q ss_pred             HhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      |+.+++.+++++++.|.+.+        .|+||++||..++.   +.+.|+++|++++.++++++.++. ..||+++.++
T Consensus       117 n~~~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~---~~~~Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~  184 (250)
T PRK07774        117 NLDGALVCTRAVYKHMAKRG--------GGAIVNQSSTAAWL---YSNFYGLAKVGLNGLTQQLARELG-GMNIRVNAIA  184 (250)
T ss_pred             hhHHHHHHHHHHHHHHHHhC--------CcEEEEEecccccC---CccccHHHHHHHHHHHHHHHHHhC-ccCeEEEEEe
Confidence            99999999999999998765        68999999987654   356899999999999999999998 8899999999


Q ss_pred             cCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       159 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      ||.++|++..... +...........+..++.+|+|+++.+++++++.....+|+.+++++|.++.
T Consensus       185 pg~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~g~~~~  249 (250)
T PRK07774        185 PGPIDTEATRTVT-PKEFVADMVKGIPLSRMGTPEDLVGMCLFLLSDEASWITGQIFNVDGGQIIR  249 (250)
T ss_pred             cCcccCccccccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhhCcCCCEEEECCCeecc
Confidence            9999998754332 3344444555566667889999999999999876667899999999997764

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.96  E-value=5.1e-28  Score=207.38  Aligned_cols=193  Identities=23%  Similarity=0.261  Sum_probs=167.0

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|++++++++.+++.+.+.++.++.+|++|.++++.+++++.+++|++|++|||+|.....++.+.+.++|++.+++|+
T Consensus        38 ~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~  117 (334)
T PRK07109         38 LARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTY  117 (334)
T ss_pred             EECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHh
Confidence            36889999999999988888999999999999999999999999999999999999987778888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcC-CCCeEEEEEec
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT-DYAIRVNGIAP  159 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~-~~gi~v~~v~P  159 (257)
                      .+++.+++.++++|.+++        .|+||++||..+..+.+.++.|+++|+++++|+++++.|+.. ..+|+++.|+|
T Consensus       118 ~g~~~~~~~~l~~~~~~~--------~g~iV~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~P  189 (334)
T PRK07109        118 LGVVHGTLAALRHMRPRD--------RGAIIQVGSALAYRSIPLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQP  189 (334)
T ss_pred             HHHHHHHHHHHHHHHhcC--------CcEEEEeCChhhccCCCcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeC
Confidence            999999999999999876        689999999999999999999999999999999999999861 25799999999


Q ss_pred             CcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCC
Q 025124          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (257)
Q Consensus       160 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  206 (257)
                      |+++|++.....   ...  .....+..+..+|+|+|+.++++++..
T Consensus       190 g~v~T~~~~~~~---~~~--~~~~~~~~~~~~pe~vA~~i~~~~~~~  231 (334)
T PRK07109        190 PAVNTPQFDWAR---SRL--PVEPQPVPPIYQPEVVADAILYAAEHP  231 (334)
T ss_pred             CCccCchhhhhh---hhc--cccccCCCCCCCHHHHHHHHHHHHhCC
Confidence            999998542110   000  011223456789999999999999764

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.2e-27  Score=194.22  Aligned_cols=206  Identities=29%  Similarity=0.421  Sum_probs=178.1

Q ss_pred             CcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHH
Q 025124            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG   82 (257)
Q Consensus         3 r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~   82 (257)
                      |+.+.++++.+++...+.++.++.+|+++.++++.+++++.+.++++|++|||+|.....++.+.+.++|+..+++|+.+
T Consensus        42 ~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~  121 (249)
T PRK12827         42 RGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDG  121 (249)
T ss_pred             ccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhH
Confidence            45667777777887777789999999999999999999999999999999999998777788889999999999999999


Q ss_pred             HHHHHHHHH-HHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           83 TFIMCHEAL-KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        83 ~~~l~~~~~-~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      ++.+++++. +.+.++.        .+++|++||..+..+.+++..|+++|++++.++++++.++. +.||+++.++||+
T Consensus       122 ~~~l~~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~~~~-~~~i~~~~i~pg~  192 (249)
T PRK12827        122 FFNVTQAALPPMIRARR--------GGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLANELA-PRGITVNAVAPGA  192 (249)
T ss_pred             HHHHHHHHHHHHHhcCC--------CeEEEEECCchhcCCCCCCchhHHHHHHHHHHHHHHHHHhh-hhCcEEEEEEECC
Confidence            999999999 5555544        57899999999988888899999999999999999999998 8899999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                      ++|++......    ........+...+.+++|+++.+++++++....++|+.+.+|||.
T Consensus       193 v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~g~  248 (249)
T PRK12827        193 INTPMADNAAP----TEHLLNPVPVQRLGEPDEVAALVAFLVSDAASYVTGQVIPVDGGF  248 (249)
T ss_pred             cCCCcccccch----HHHHHhhCCCcCCcCHHHHHHHHHHHcCcccCCccCcEEEeCCCC
Confidence            99986543321    122334455566779999999999999888888999999999985

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=4e-27  Score=193.39  Aligned_cols=210  Identities=30%  Similarity=0.449  Sum_probs=182.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|++++++++.+.+...+.++.++.+|++++++++++++++.++++++|++||++|......+.+.+.+++++.+++|+.
T Consensus        37 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~  116 (247)
T PRK05565         37 DINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLT  116 (247)
T ss_pred             CCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhH
Confidence            68888888888888776778999999999999999999999999999999999999876677788899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.+.+.+++.+.+++        .+++|++||..+..+.+....|+.+|++++.++++++.++. ..||+++.++||+
T Consensus       117 ~~~~l~~~~~~~~~~~~--------~~~~v~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~~~~~~~-~~gi~~~~v~pg~  187 (247)
T PRK05565        117 GVMLLTRYALPYMIKRK--------SGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELA-PSGIRVNAVAPGA  187 (247)
T ss_pred             HHHHHHHHHHHHHHhcC--------CcEEEEECCHhhccCCCCccHHHHHHHHHHHHHHHHHHHHH-HcCeEEEEEEECC
Confidence            99999999999998865        68899999999988888899999999999999999999998 8899999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      ++|++..... .. .........+..++.+++++++.+.+++++....++|+.+.+|+|+.
T Consensus       188 v~t~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~~~~  246 (247)
T PRK05565        188 IDTEMWSSFS-EE-DKEGLAEEIPLGRLGKPEEIAKVVLFLASDDASYITGQIITVDGGWT  246 (247)
T ss_pred             ccCccccccC-hH-HHHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCccCcEEEecCCcc
Confidence            9987653322 11 22222223455677899999999999999988899999999999953

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.3e-27  Score=199.44  Aligned_cols=233  Identities=16%  Similarity=0.171  Sum_probs=185.0

Q ss_pred             CCCcHHHHHHHHHHHHhcCCC-eEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGIP-AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~-~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      ++|+.+.++++.+++...+.+ +.++.+|++++++++++++++.+.++++|++|||+|......+.+.+.++|+..+++|
T Consensus        30 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n  109 (272)
T PRK07832         30 TDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVN  109 (272)
T ss_pred             EeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHH
Confidence            368888888888888766554 4568999999999999999999999999999999998777788899999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.+++.++++++|.|.+...       .|+||++||..+..+.++...|+++|+++.+|+++++.|+. ++||+++.|+|
T Consensus       110 ~~~~~~l~~~~~~~l~~~~~-------~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~-~~~i~v~~v~P  181 (272)
T PRK07832        110 LMGPIHVIETFVPPMVAAGR-------GGHLVNVSSAAGLVALPWHAAYSASKFGLRGLSEVLRFDLA-RHGIGVSVVVP  181 (272)
T ss_pred             hHHHHHHHHHHHHHHHhCCC-------CcEEEEEccccccCCCCCCcchHHHHHHHHHHHHHHHHHhh-hcCcEEEEEec
Confidence            99999999999999976431       58999999998888888899999999999999999999998 88999999999


Q ss_pred             CcccCCCCCCCCC-----hHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCC-CCCcHHH
Q 025124          160 GPIKDTAGVSKLA-----PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNP-RDLPKEA  233 (257)
Q Consensus       160 g~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~-~~~~~~~  233 (257)
                      |+++|++......     ........... ..++..+|+++|+.+++++. ..+++++..+.+++|.++... +......
T Consensus       182 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~vA~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  259 (272)
T PRK07832        182 GAVKTPLVNTVEIAGVDREDPRVQKWVDR-FRGHAVTPEKAAEKILAGVE-KNRYLVYTSPDIRALYWFKRKAWWPYSLV  259 (272)
T ss_pred             CcccCcchhcccccccCcchhhHHHHHHh-cccCCCCHHHHHHHHHHHHh-cCCeEEecCcchHHHHHHHhcCchHHHHH
Confidence            9999987543210     11111111111 23456899999999999996 457788988888888665432 2223333


Q ss_pred             HHHHHHHHhc
Q 025124          234 VNQLSRAVER  243 (257)
Q Consensus       234 ~~~~~~~~~~  243 (257)
                      +.+..+.+.|
T Consensus       260 ~~~~~~~~~~  269 (272)
T PRK07832        260 MRQVNVFFTR  269 (272)
T ss_pred             HHHHHHHHHh
Confidence            4444555444

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.5e-27  Score=194.50  Aligned_cols=205  Identities=28%  Similarity=0.358  Sum_probs=170.7

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.+.+     ...++.+|+++.++++.+++.    ++++|++|||+|.....+..+.+.++|++.+++|+.
T Consensus        40 ~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~----~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~  110 (245)
T PRK07060         40 ARNAAALDRLAGET-----GCEPLRLDVGDDAAIRAALAA----AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNAR  110 (245)
T ss_pred             eCCHHHHHHHHHHh-----CCeEEEecCCCHHHHHHHHHH----hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            56766665544332     356789999999988887765    578999999999877777778899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.+++++++.+.+...       .++||++||..+..+.+....|+++|++++.++++++.++. +.||++++++||.
T Consensus       111 ~~~~l~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~~a~~~~-~~~i~v~~v~pg~  182 (245)
T PRK07060        111 GAALVARHVARAMIAAGR-------GGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELG-PHGIRVNSVNPTV  182 (245)
T ss_pred             HHHHHHHHHHHHHHHcCC-------CcEEEEEccHHHcCCCCCCcHhHHHHHHHHHHHHHHHHHHh-hhCeEEEEEeeCC
Confidence            999999999999876431       37899999999998888899999999999999999999998 8899999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +.|++..................+.+++.+++|+++.+.+++++...+++|+.+.+|||+.+
T Consensus       183 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~~~~~~g~~~  244 (245)
T PRK07060        183 TLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDAASMVSGVSLPVDGGYTA  244 (245)
T ss_pred             CCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCccCcEEeECCCccC
Confidence            99987543332223333344556778899999999999999998888999999999999754

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.2e-27  Score=199.99  Aligned_cols=196  Identities=20%  Similarity=0.165  Sum_probs=164.2

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|++++++++.+++...+.++.++.+|++|.++++++++++.+++|++|++|||||+....++.+.+.++|+..+++|+
T Consensus        36 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~  115 (275)
T PRK05876         36 GDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDL  115 (275)
T ss_pred             EeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhh
Confidence            36788889998888887777899999999999999999999999999999999999988778889999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .+++.+++.++|.|.+++.       .|+||++||..+..+.++.+.|+++|+++.+|+++++.|+. ++||++++|+||
T Consensus       116 ~g~~~l~~~~~p~m~~~~~-------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~-~~gi~v~~v~Pg  187 (275)
T PRK05876        116 WGSIHTVEAFLPRLLEQGT-------GGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVT-ADGIGVSVLCPM  187 (275)
T ss_pred             HHHHHHHHHHHHHHHhcCC-------CCEEEEeCChhhccCCCCCchHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEEeC
Confidence            9999999999999987642       58999999999999999999999999999999999999998 889999999999


Q ss_pred             cccCCCCCCCCCh--HH--H---HHHhhhhccCCCCCCHHhHHHHHHHhcc
Q 025124          161 PIKDTAGVSKLAP--EE--I---RSKATDYMAAYKFGEKWDIAMAALYLAS  204 (257)
Q Consensus       161 ~v~t~~~~~~~~~--~~--~---~~~~~~~~~~~~~~~~~dva~~~~~l~~  204 (257)
                      +++|++.......  ..  .   ............+.+|+|+|+.++..+.
T Consensus       188 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~  238 (275)
T PRK05876        188 VVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAIL  238 (275)
T ss_pred             ccccccccchhhhcCccccccccccccccccccccCCCHHHHHHHHHHHHH
Confidence            9999865321100  00  0   0000001112346799999999998884

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.96  E-value=5.4e-27  Score=194.03  Aligned_cols=211  Identities=25%  Similarity=0.335  Sum_probs=178.0

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++.+.+.+.  +.+++++.+|++|.+++..+++++.++++++|++||++|.....++.+.+.++|+..+++|+.
T Consensus        33 ~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~  110 (257)
T PRK07074         33 DIDAAALAAFADALG--DARFVPVACDLTDAASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLE  110 (257)
T ss_pred             eCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhH
Confidence            678888877777663  357889999999999999999999999999999999999877677888899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.+.+++++.+.+++        .++|+++||..+..+ .+...|+++|++++.++++++.++. ++||+++.++||+
T Consensus       111 ~~~~~~~~~~~~~~~~~--------~~~iv~~sS~~~~~~-~~~~~y~~sK~a~~~~~~~~a~~~~-~~gi~v~~v~pg~  180 (257)
T PRK07074        111 AAYLCVEAVLEGMLKRS--------RGAVVNIGSVNGMAA-LGHPAYSAAKAGLIHYTKLLAVEYG-RFGIRANAVAPGT  180 (257)
T ss_pred             HHHHHHHHHHHHHHHcC--------CeEEEEEcchhhcCC-CCCcccHHHHHHHHHHHHHHHHHHh-HhCeEEEEEEeCc
Confidence            99999999999998765        688999999766533 3567899999999999999999998 8899999999999


Q ss_pred             ccCCCCCCCCC-hHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          162 IKDTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       162 v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      +.|++...... ............+..++.+++|+++++++|+++...+++|+.+.+|+|....
T Consensus       181 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~~  244 (257)
T PRK07074        181 VKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASPAARAITGVCLPVDGGLTAG  244 (257)
T ss_pred             CCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCcCCcEEEeCCCcCcC
Confidence            99987543221 1233333334556778899999999999999887788999999999996654

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=4.6e-27  Score=194.27  Aligned_cols=214  Identities=22%  Similarity=0.276  Sum_probs=176.9

Q ss_pred             HHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC--CCCCCCCCHHHHHHHHHHHhHH
Q 025124            5 KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVG   82 (257)
Q Consensus         5 ~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~   82 (257)
                      .+.+++..+.+...+.++.++.+|+++++++.++++++.+.++++|++|||+|...  ..++.+.+.++|+..+++|+.+
T Consensus        37 ~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~  116 (256)
T PRK12745         37 DEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRG  116 (256)
T ss_pred             hhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchH
Confidence            34566677777666678999999999999999999999999999999999999753  3567788999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcc
Q 025124           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (257)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v  162 (257)
                      ++.+++++.+.|.++..+..  ...++|+++||..+..+.++.+.|+++|+++++|+++++.++. ++||+++.|+||.+
T Consensus       117 ~~~l~~~~~~~~~~~~~~~~--~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~-~~gi~v~~i~pg~v  193 (256)
T PRK12745        117 PFFLTQAVAKRMLAQPEPEE--LPHRSIVFVSSVNAIMVSPNRGEYCISKAGLSMAAQLFAARLA-EEGIGVYEVRPGLI  193 (256)
T ss_pred             HHHHHHHHHHHHHhccCcCC--CCCcEEEEECChhhccCCCCCcccHHHHHHHHHHHHHHHHHHH-HhCCEEEEEecCCC
Confidence            99999999999987642110  0135799999999998888899999999999999999999998 88999999999999


Q ss_pred             cCCCCCCCCChHHHHHHhh-hhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          163 KDTAGVSKLAPEEIRSKAT-DYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       163 ~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      .|++.....  ......+. ...+..++.+++|+++++.+++++...+.+|..+.+|||..+
T Consensus       194 ~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~gg~~~  253 (256)
T PRK12745        194 KTDMTAPVT--AKYDALIAKGLVPMPRWGEPEDVARAVAALASGDLPYSTGQAIHVDGGLSI  253 (256)
T ss_pred             cCccccccc--hhHHhhhhhcCCCcCCCcCHHHHHHHHHHHhCCcccccCCCEEEECCCeec
Confidence            988653221  11111111 234667788999999999999988888899999999999764

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.96  E-value=5.7e-27  Score=217.05  Aligned_cols=214  Identities=26%  Similarity=0.308  Sum_probs=181.4

Q ss_pred             CCcHHHHHHHHHHHHhc-C-CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSL-G-IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~-~-~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      +|+.+.++.+.+++.+. + .++..+.+|++|.++++.+++++.+++|++|++|||||.....++.+.+.++|+..+++|
T Consensus       445 ~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN  524 (676)
T TIGR02632       445 DLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDIL  524 (676)
T ss_pred             eCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHH
Confidence            57888888887777653 2 367889999999999999999999999999999999998777788889999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.+.+.+++.+++.|+++..       .|+||++||..+..+.++...|+++|+++++|+++++.|+. ++||+||+|+|
T Consensus       525 ~~g~~~l~~~al~~m~~~~~-------~g~IV~iSS~~a~~~~~~~~aY~aSKaA~~~l~r~lA~el~-~~gIrVn~V~P  596 (676)
T TIGR02632       525 ATGYFLVAREAFRQMREQGL-------GGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCLAAEGG-TYGIRVNTVNP  596 (676)
T ss_pred             HHHHHHHHHHHHHHHHhcCC-------CCEEEEEeChhhcCCCCCCHHHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEC
Confidence            99999999999999987531       47899999999999999999999999999999999999998 89999999999


Q ss_pred             CcccCCC-CCCC-C----------ChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          160 GPIKDTA-GVSK-L----------APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       160 g~v~t~~-~~~~-~----------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      |.+.++. .... .          ......+.+....++++..+|+|+|+++.+++++...+++|+.+.+|||..-
T Consensus       597 g~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDGG~~~  672 (676)
T TIGR02632       597 DAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPADIAEAVFFLASSKSEKTTGCIITVDGGVPA  672 (676)
T ss_pred             CceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCchh
Confidence            9997532 1110 0          1122233355566778889999999999999988888899999999999643

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.96  E-value=4.8e-28  Score=198.65  Aligned_cols=178  Identities=22%  Similarity=0.205  Sum_probs=146.3

Q ss_pred             EEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCC
Q 025124           23 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQA  102 (257)
Q Consensus        23 ~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~  102 (257)
                      .++++|++|.++++++++++.   +++|+||||||....        ++++.++++|+.+++.+++.++|+|.+      
T Consensus        26 ~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~~--------~~~~~~~~vN~~~~~~l~~~~~~~~~~------   88 (241)
T PRK12428         26 GFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPGT--------APVELVARVNFLGLRHLTEALLPRMAP------   88 (241)
T ss_pred             HhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCCC--------CCHHHhhhhchHHHHHHHHHHHHhccC------
Confidence            457999999999999998874   689999999996521        347899999999999999999999864      


Q ss_pred             CCCCCceEEEEccccccc---------------------------ccccchhhHHHHHHHHHHHHHHH-HHhcCCCCeEE
Q 025124          103 SSSSGGIIINISATLHYT---------------------------ATWYQIHVSAAKAAVDSITRSLA-LEWGTDYAIRV  154 (257)
Q Consensus       103 ~~~~~g~ii~iss~~~~~---------------------------~~~~~~~Y~~sK~a~~~l~~~la-~e~~~~~gi~v  154 (257)
                          .|+||++||..+..                           +.++...|+++|+++++|+++++ .|+. ++||+|
T Consensus        89 ----~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~e~~-~~girv  163 (241)
T PRK12428         89 ----GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQAQPWFG-ARGIRV  163 (241)
T ss_pred             ----CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHHHHHHhhh-ccCeEE
Confidence                58899999988762                           45677899999999999999999 9998 889999


Q ss_pred             EEEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          155 NGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       155 ~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      |+|+||++.|++..................+++++.+|+|+|+.+++|+++.+.+++|+.+.+|||..
T Consensus       164 n~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~l~s~~~~~~~G~~i~vdgg~~  231 (241)
T PRK12428        164 NCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVLVFLCSDAARWINGVNLPVDGGLA  231 (241)
T ss_pred             EEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHHHHHHHHHHHcChhhcCccCcEEEecCchH
Confidence            99999999999764322110000011123466778999999999999999888899999999999964

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.96  E-value=1.5e-26  Score=190.38  Aligned_cols=214  Identities=30%  Similarity=0.396  Sum_probs=185.1

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|+.+++++..+.+...+.++.++.+|++|.++++.+++++.++++++|++||++|.....++.+.+.++++..+++|+
T Consensus        36 ~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~  115 (251)
T PRK12826         36 VDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNL  115 (251)
T ss_pred             EeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhh
Confidence            36888888888888887777799999999999999999999999999999999999987777788889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccc-cccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~-~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      .+++.+.+.+++.|.+++        .++||++||..+. .+.++...|+++|+++++++++++.++. +.|++++.++|
T Consensus       116 ~~~~~l~~~~~~~~~~~~--------~~~ii~~ss~~~~~~~~~~~~~y~~sK~a~~~~~~~~~~~~~-~~~i~~~~i~p  186 (251)
T PRK12826        116 TGTFLLTQAALPALIRAG--------GGRIVLTSSVAGPRVGYPGLAHYAASKAGLVGFTRALALELA-ARNITVNSVHP  186 (251)
T ss_pred             HHHHHHHHHHHHHHHHcC--------CcEEEEEechHhhccCCCCccHHHHHHHHHHHHHHHHHHHHH-HcCeEEEEEee
Confidence            999999999999998866        6889999999887 7778889999999999999999999998 88999999999


Q ss_pred             CcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       160 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      |.+.|++...... ......+....+..++.+++|+++.+.++++....+++|+.+.++||..+.
T Consensus       187 g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~~  250 (251)
T PRK12826        187 GGVDTPMAGNLGD-AQWAEAIAAAIPLGRLGEPEDIAAAVLFLASDEARYITGQTLPVDGGATLP  250 (251)
T ss_pred             CCCCcchhhhcCc-hHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCcEEEECCCccCC
Confidence            9999886533221 121233444556667899999999999999887778999999999997653

>PRK05855 short chain dehydrogenase; Validated

Probab=99.96  E-value=4.6e-27  Score=215.44  Aligned_cols=198  Identities=19%  Similarity=0.190  Sum_probs=168.7

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|+.++++++.+.+.+.+.++.++.||++|+++++++++++.+++|++|++|||||+....++.+.+.++|+.++++|+
T Consensus       345 ~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~  424 (582)
T PRK05855        345 SDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNL  424 (582)
T ss_pred             EeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhh
Confidence            37889999999999988788899999999999999999999999999999999999988778888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .|++.++++++|.|.+++.       .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+|++|+||
T Consensus       425 ~g~~~~~~~~~~~~~~~~~-------~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~e~~-~~gi~v~~v~Pg  496 (582)
T PRK05855        425 WGVIHGCRLFGRQMVERGT-------GGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRAELA-AAGIGVTAICPG  496 (582)
T ss_pred             HHHHHHHHHHHHHHHhcCC-------CcEEEEECChhhccCCCCCcHHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEEeC
Confidence            9999999999999998642       48999999999999999999999999999999999999999 899999999999


Q ss_pred             cccCCCCCCCCCh----HH--HHHHhhhhccCCCCCCHHhHHHHHHHhccCC
Q 025124          161 PIKDTAGVSKLAP----EE--IRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (257)
Q Consensus       161 ~v~t~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  206 (257)
                      +++|++.......    +.  ............+..+|+++|+.+++.+...
T Consensus       497 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~~~~~~  548 (582)
T PRK05855        497 FVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVAKAIVDAVKRN  548 (582)
T ss_pred             CCcccchhccccCCcccchhhhHHhhhhhhccccCCCHHHHHHHHHHHHHcC
Confidence            9999875432211    00  0011111122234468999999999999753

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.96  E-value=2.6e-26  Score=188.47  Aligned_cols=207  Identities=31%  Similarity=0.409  Sum_probs=179.4

Q ss_pred             HHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHH
Q 025124            6 TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI   85 (257)
Q Consensus         6 ~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~   85 (257)
                      ..++++.+++...+.++.++.+|+++.+++..+++++.+.++++|++||++|......+.+.+.+.+++.+++|+.+++.
T Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~  120 (248)
T PRK05557         41 AGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFN  120 (248)
T ss_pred             hHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHH
Confidence            34667777776667789999999999999999999999999999999999998777777888999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCC
Q 025124           86 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT  165 (257)
Q Consensus        86 l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~  165 (257)
                      +.+.+++.+.+.+        .++++++||..+..+.++...|+++|++++.++++++.++. ..||+++.++||+++|+
T Consensus       121 l~~~~~~~~~~~~--------~~~~v~iss~~~~~~~~~~~~y~~sk~a~~~~~~~~a~~~~-~~~i~~~~v~pg~~~~~  191 (248)
T PRK05557        121 LTKAVARPMMKQR--------SGRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLARELA-SRGITVNAVAPGFIETD  191 (248)
T ss_pred             HHHHHHHHHHhcC--------CeEEEEEcccccCcCCCCCchhHHHHHHHHHHHHHHHHHhh-hhCeEEEEEecCccCCc
Confidence            9999999998765        68899999998888888899999999999999999999998 88999999999999887


Q ss_pred             CCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          166 AGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +....  ............+.+++.+++|+++.+.+++.+....++|+.+.++||+++
T Consensus       192 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~i~~~~~~  247 (248)
T PRK05557        192 MTDAL--PEDVKEAILAQIPLGRLGQPEEIASAVAFLASDEAAYITGQTLHVNGGMVM  247 (248)
T ss_pred             ccccc--ChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCccccEEEecCCccC
Confidence            64322  223334444555667789999999999999988778899999999999765

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.2e-26  Score=193.55  Aligned_cols=195  Identities=19%  Similarity=0.152  Sum_probs=167.1

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.+++...+.++.++.+|++++++++.+++++.+.++++|++|||+|......+.+.+.++|++.+++|+.
T Consensus        31 ~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~  110 (270)
T PRK05650         31 DVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLM  110 (270)
T ss_pred             eCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccH
Confidence            58888899999888887888999999999999999999999999999999999999887788889999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.+++.++|.|.+.+        .++||++||..+..+.++.+.|+++|+++++|+++++.|+. +.||+++.|+||+
T Consensus       111 ~~~~~~~~~~~~~~~~~--------~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~e~~-~~gi~v~~v~Pg~  181 (270)
T PRK05650        111 GVVKGCKAFLPLFKRQK--------SGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVELA-DDEIGVHVVCPSF  181 (270)
T ss_pred             HHHHHHHHHHHHHHhCC--------CCEEEEECChhhcCCCCCchHHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEecCc
Confidence            99999999999998865        68999999999999999999999999999999999999998 8899999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccC
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  205 (257)
                      ++|++........................+++++|+.++..+..
T Consensus       182 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~l~~  225 (270)
T PRK05650        182 FQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIADYIYQQVAK  225 (270)
T ss_pred             cccCcccccccCchhHHHHHHHHhhcCCCCHHHHHHHHHHHHhC
Confidence            99987543322111111111111123457999999999999975

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.96  E-value=6.5e-27  Score=181.95  Aligned_cols=208  Identities=23%  Similarity=0.227  Sum_probs=179.2

Q ss_pred             HHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC----CCCCCCCCHHHHHHHHHHHhHH
Q 025124            7 VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF----LVPAEDLSPNGFRTVIEIDSVG   82 (257)
Q Consensus         7 ~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~   82 (257)
                      ++++-++++.+.-....+++||+++.++++++++++.+++|++|++||+.++.+    .+.+.+.+.+.|...+++..++
T Consensus        43 ~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS  122 (259)
T COG0623          43 RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYS  122 (259)
T ss_pred             HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhh
Confidence            455544555443334677999999999999999999999999999999999876    3678889999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcc
Q 025124           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (257)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v  162 (257)
                      ...+.+++.|.|..          +|.|+.++=.++....|++...+.+|+++++-+|.|+.+++ +.|||||.|.-|.+
T Consensus       123 ~~~lak~a~~lM~~----------ggSiltLtYlgs~r~vPnYNvMGvAKAaLEasvRyLA~dlG-~~gIRVNaISAGPI  191 (259)
T COG0623         123 FTALAKAARPLMNN----------GGSILTLTYLGSERVVPNYNVMGVAKAALEASVRYLAADLG-KEGIRVNAISAGPI  191 (259)
T ss_pred             HHHHHHHHHHhcCC----------CCcEEEEEeccceeecCCCchhHHHHHHHHHHHHHHHHHhC-ccCeEEeeecccch
Confidence            99999999999987          68899999988888889999999999999999999999999 99999999999999


Q ss_pred             cCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCC
Q 025124          163 KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSN  225 (257)
Q Consensus       163 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~  225 (257)
                      .|=-...--.-..+........|+++-.+.|||+...+||+|+-++.++|+++.+|+|+.+..
T Consensus       192 rTLAasgI~~f~~~l~~~e~~aPl~r~vt~eeVG~tA~fLlSdLssgiTGei~yVD~G~~i~~  254 (259)
T COG0623         192 RTLAASGIGDFRKMLKENEANAPLRRNVTIEEVGNTAAFLLSDLSSGITGEIIYVDSGYHIMG  254 (259)
T ss_pred             HHHHhhccccHHHHHHHHHhhCCccCCCCHHHhhhhHHHHhcchhcccccceEEEcCCceeec
Confidence            963221111224456667777899999999999999999999999999999999999987753

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.96  E-value=9.3e-27  Score=189.49  Aligned_cols=200  Identities=24%  Similarity=0.338  Sum_probs=164.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++.+.+.+.+ +.+++++.+|++|++++..++++    ++++|++|||+|.....++.+.+.+++++++++|+.
T Consensus        28 ~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~----~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~  102 (230)
T PRK07041         28 SRSRDRLAAAARALGG-GAPVRTAALDITDEAAVDAFFAE----AGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFW  102 (230)
T ss_pred             eCCHHHHHHHHHHHhc-CCceEEEEccCCCHHHHHHHHHh----cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHH
Confidence            5777788777777653 56789999999999999888875    478999999999877777888899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.+++  .+.+.  +        .|+||++||..+..+.++...|+++|+++++|+++++.|+. +  ||+++++||+
T Consensus       103 ~~~~l~~--~~~~~--~--------~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~--irv~~i~pg~  167 (230)
T PRK07041        103 GAYRVAR--AARIA--P--------GGSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELA-P--VRVNTVSPGL  167 (230)
T ss_pred             HHHHHHh--hhhhc--C--------CeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHHHHHHhh-C--ceEEEEeecc
Confidence            9999999  34443  2        58999999999998888999999999999999999999987 4  9999999999


Q ss_pred             ccCCCCCCCCC--hHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          162 IKDTAGVSKLA--PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       162 v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ++|++......  ............+.++..+|+|+++.+++++++  .+++|+.+.++||..+
T Consensus       168 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~--~~~~G~~~~v~gg~~~  229 (230)
T PRK07041        168 VDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAAN--GFTTGSTVLVDGGHAI  229 (230)
T ss_pred             cccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcC--CCcCCcEEEeCCCeec
Confidence            99987432111  112222333445667788999999999999974  5789999999999654

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.5e-26  Score=189.71  Aligned_cols=196  Identities=23%  Similarity=0.274  Sum_probs=168.6

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|++++++++.+.+.+.+.++.++.+|+++++++..+++.+.+.++++|++|||+|.....++.+.+.++++.++++|+
T Consensus        36 ~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~  115 (241)
T PRK07454         36 VARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNL  115 (241)
T ss_pred             EeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhcc
Confidence            36888888888888877777899999999999999999999999999999999999987777788889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .+++.+++.+++.|.+++        .++||++||..+..+.+++..|+++|++++.++++++.++. +.||+++.|+||
T Consensus       116 ~~~~~~~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~~~~~a~e~~-~~gi~v~~i~pg  186 (241)
T PRK07454        116 TSVFQCCSAVLPGMRARG--------GGLIINVSSIAARNAFPQWGAYCVSKAALAAFTKCLAEEER-SHGIRVCTITLG  186 (241)
T ss_pred             HHHHHHHHHHHHHHHhcC--------CcEEEEEccHHhCcCCCCccHHHHHHHHHHHHHHHHHHHhh-hhCCEEEEEecC
Confidence            999999999999998865        68999999999888888899999999999999999999998 889999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCc
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGN  213 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  213 (257)
                      ++.|++......    .    ......+..+++|+|+.++++++++...+.+.
T Consensus       187 ~i~t~~~~~~~~----~----~~~~~~~~~~~~~va~~~~~l~~~~~~~~~~~  231 (241)
T PRK07454        187 AVNTPLWDTETV----Q----ADFDRSAMLSPEQVAQTILHLAQLPPSAVIED  231 (241)
T ss_pred             cccCCccccccc----c----cccccccCCCHHHHHHHHHHHHcCCccceeee
Confidence            999986432110    0    01112346799999999999999776655443

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=1e-26  Score=207.25  Aligned_cols=191  Identities=23%  Similarity=0.267  Sum_probs=165.5

Q ss_pred             eEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCC
Q 025124           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ  101 (257)
Q Consensus        22 ~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  101 (257)
                      ..++.+|+++.++++.+++.+.+.++++|++|||+|+.....+.+.+.++|+.++++|+.+++.+++++.+.+..+.   
T Consensus       258 ~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~---  334 (450)
T PRK08261        258 GTALALDITAPDAPARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGD---  334 (450)
T ss_pred             CeEEEEeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcC---
Confidence            45789999999999999999999999999999999988878888999999999999999999999999999765544   


Q ss_pred             CCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHHHHhh
Q 025124          102 ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT  181 (257)
Q Consensus       102 ~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~  181 (257)
                           .++||++||..+..+.+++..|+++|+++++|+++++.|+. ++||++++|+||+++|++.....  ....+...
T Consensus       335 -----~g~iv~~SS~~~~~g~~~~~~Y~asKaal~~~~~~la~el~-~~gi~v~~v~PG~i~t~~~~~~~--~~~~~~~~  406 (450)
T PRK08261        335 -----GGRIVGVSSISGIAGNRGQTNYAASKAGVIGLVQALAPLLA-ERGITINAVAPGFIETQMTAAIP--FATREAGR  406 (450)
T ss_pred             -----CCEEEEECChhhcCCCCCChHHHHHHHHHHHHHHHHHHHHh-hhCcEEEEEEeCcCcchhhhccc--hhHHHHHh
Confidence                 68999999999998989999999999999999999999998 89999999999999987653221  11112222


Q ss_pred             hhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          182 DYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       182 ~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ...++.+...|+|+++++.||+++.+.++||+++.+||+..+
T Consensus       407 ~~~~l~~~~~p~dva~~~~~l~s~~~~~itG~~i~v~g~~~~  448 (450)
T PRK08261        407 RMNSLQQGGLPVDVAETIAWLASPASGGVTGNVVRVCGQSLL  448 (450)
T ss_pred             hcCCcCCCCCHHHHHHHHHHHhChhhcCCCCCEEEECCCccc
Confidence            233556678999999999999999899999999999998765

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.95  E-value=3.6e-26  Score=187.41  Aligned_cols=212  Identities=32%  Similarity=0.404  Sum_probs=184.0

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|++++++.+.+++...+.++.++.+|++|++++.++++++.+.++++|++||++|.....+..+.+.++++..++.|+
T Consensus        35 ~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~  114 (246)
T PRK05653         35 YDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNL  114 (246)
T ss_pred             EeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhh
Confidence            46888888888888888888899999999999999999999999999999999999987667777889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .+++.+++++.++|.+..        .++||++||..+..+......|+.+|++++.++++++.++. +.|++++.++||
T Consensus       115 ~~~~~l~~~~~~~l~~~~--------~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~~~~~~l~~~~~-~~~i~~~~i~pg  185 (246)
T PRK05653        115 TGTFNVVRAALPPMIKAR--------YGRIVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALALELA-SRGITVNAVAPG  185 (246)
T ss_pred             HHHHHHHHHHHHHHHhcC--------CcEEEEECcHHhccCCCCCcHhHhHHHHHHHHHHHHHHHHh-hcCeEEEEEEeC
Confidence            999999999999998765        57999999998888888889999999999999999999998 889999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      .+.+++...  .............+...+.+++|+++.+.+++++....++|..+.++||+.+
T Consensus       186 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~~~  246 (246)
T PRK05653        186 FIDTDMTEG--LPEEVKAEILKEIPLGRLGQPEEVANAVAFLASDAASYITGQVIPVNGGMYM  246 (246)
T ss_pred             CcCCcchhh--hhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEeCCCeeC
Confidence            999876422  1122333333445566788999999999999988778899999999999764

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.95  E-value=9.7e-27  Score=190.57  Aligned_cols=198  Identities=21%  Similarity=0.269  Sum_probs=168.6

Q ss_pred             CCCcHHHHHHHHHHHHhcC-CCeEEEEccCCC--HHHHHHHHHHHHHHh-CCccEEEeCCCCCC-CCCCCCCCHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLG-IPAIGLEGDVRK--REDAVRVVESTINHF-GKLDILVNAAAGNF-LVPAEDLSPNGFRTV   75 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~-~~~~~~~~Dls~--~~~~~~~~~~~~~~~-g~id~li~~ag~~~-~~~~~~~~~~~~~~~   75 (257)
                      ++|++++++++.+++.+.+ ..+.++.+|+++  .+++..+++++.+.+ +++|++|||||... ..++.+.+.++|++.
T Consensus        36 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~  115 (239)
T PRK08703         36 VARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQ  115 (239)
T ss_pred             EeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHH
Confidence            3688888888888887653 467889999986  568899999999988 79999999999654 367888999999999


Q ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCC-CeEE
Q 025124           76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY-AIRV  154 (257)
Q Consensus        76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~-gi~v  154 (257)
                      +++|+.+++.+++++++.|.+.+        .+++++++|..+..+.++...|+++|++++.|+++++.|+. ++ +|+|
T Consensus       116 ~~~n~~g~~~l~~~~~~~~~~~~--------~~~iv~~ss~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~-~~~~i~v  186 (239)
T PRK08703        116 YRINTVAPMGLTRALFPLLKQSP--------DASVIFVGESHGETPKAYWGGFGASKAALNYLCKVAADEWE-RFGNLRA  186 (239)
T ss_pred             HHHhhhHHHHHHHHHHHHHHhCC--------CCEEEEEeccccccCCCCccchHHhHHHHHHHHHHHHHHhc-cCCCeEE
Confidence            99999999999999999998765        68999999999998888889999999999999999999998 65 6999


Q ss_pred             EEEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEe
Q 025124          155 NGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIV  217 (257)
Q Consensus       155 ~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~  217 (257)
                      ++|+||++.|++........          ...+...++|++..+.+++++.+.+++|+++.+
T Consensus       187 ~~v~pG~v~t~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  239 (239)
T PRK08703        187 NVLVPGPINSPQRIKSHPGE----------AKSERKSYGDVLPAFVWWASAESKGRSGEIVYL  239 (239)
T ss_pred             EEEecCcccCccccccCCCC----------CccccCCHHHHHHHHHHHhCccccCcCCeEeeC
Confidence            99999999998754321110          112346999999999999999999999998864

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=7.5e-26  Score=185.76  Aligned_cols=210  Identities=29%  Similarity=0.398  Sum_probs=179.6

Q ss_pred             CcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHH
Q 025124            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG   82 (257)
Q Consensus         3 r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~   82 (257)
                      ++....+.+.+.+...+.++.++.+|+++.++++.+++++.+.++++|++||++|......+.+.+.++++..+++|+.+
T Consensus        39 ~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~  118 (249)
T PRK12825         39 SDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSG  118 (249)
T ss_pred             CCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHH
Confidence            34555666777777767789999999999999999999999999999999999998777778888999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcc
Q 025124           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (257)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v  162 (257)
                      ++.+++.+++++.+.+        .+++|++||..+..+.++...|+.+|++++++++.++.++. ..|++++.++||++
T Consensus       119 ~~~l~~~~~~~~~~~~--------~~~~i~~SS~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~-~~~i~~~~i~pg~~  189 (249)
T PRK12825        119 VFHLLRAVVPPMRKQR--------GGRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALARELA-EYGITVNMVAPGDI  189 (249)
T ss_pred             HHHHHHHHHHHHHhcC--------CCEEEEECccccCCCCCCchHHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEEECCc
Confidence            9999999999998865        68899999999988888899999999999999999999998 78999999999999


Q ss_pred             cCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          163 KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       163 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      .|++........... . ....+.+++.+++|+++.+.+++++.....+|+.+.++||..+
T Consensus       190 ~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~i~~g~~~  248 (249)
T PRK12825        190 DTDMKEATIEEAREA-K-DAETPLGRSGTPEDIARAVAFLCSDASDYITGQVIEVTGGVDV  248 (249)
T ss_pred             cCCccccccchhHHh-h-hccCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCEee
Confidence            998764433221111 1 1134566788999999999999988777899999999999643

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=3.6e-26  Score=188.38  Aligned_cols=208  Identities=26%  Similarity=0.336  Sum_probs=172.7

Q ss_pred             cHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHH
Q 025124            4 RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT   83 (257)
Q Consensus         4 ~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~   83 (257)
                      +.+.+......+.+.+.++.++.+|++++++++.+++++.+.++++|++|||+|.....++.+.+.+.++..+++|+.++
T Consensus        40 ~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~  119 (252)
T PRK06077         40 RAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSV  119 (252)
T ss_pred             ChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHH
Confidence            44566666667777677888999999999999999999999999999999999987777788889999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccc
Q 025124           84 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK  163 (257)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~  163 (257)
                      +.+++++.+.|.+          .++||++||..+..+.++...|+++|+++++++++++.|+. + +|+++.+.||+++
T Consensus       120 ~~~~~~~~~~~~~----------~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~-~-~i~v~~v~Pg~i~  187 (252)
T PRK06077        120 IYCSQELAKEMRE----------GGAIVNIASVAGIRPAYGLSIYGAMKAAVINLTKYLALELA-P-KIRVNAIAPGFVK  187 (252)
T ss_pred             HHHHHHHHHHhhc----------CcEEEEEcchhccCCCCCchHHHHHHHHHHHHHHHHHHHHh-c-CCEEEEEeeCCcc
Confidence            9999999999865          57899999999998999999999999999999999999997 6 8999999999999


Q ss_pred             CCCCCCCCC--hHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCC
Q 025124          164 DTAGVSKLA--PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSN  225 (257)
Q Consensus       164 t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~  225 (257)
                      |++......  ............+.+++.+|+|+++.++++++.  ...+|+.+.+++|..+..
T Consensus       188 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~--~~~~g~~~~i~~g~~~~~  249 (252)
T PRK06077        188 TKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAILKI--ESITGQVFVLDSGESLKG  249 (252)
T ss_pred             ChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHHHHHhCc--cccCCCeEEecCCeeccC
Confidence            886422110  000011111223455789999999999999963  357899999999987764

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.95  E-value=4.4e-26  Score=185.91  Aligned_cols=189  Identities=24%  Similarity=0.313  Sum_probs=161.3

Q ss_pred             EEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCC
Q 025124           23 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQA  102 (257)
Q Consensus        23 ~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~  102 (257)
                      .++.+|++|.++++++++++.+.+ ++|++|||+|.....++.+.+.++|+..+++|+.+++.+.+.+++.|++.+    
T Consensus        44 ~~~~~D~~~~~~~~~~~~~~~~~~-~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----  118 (234)
T PRK07577         44 ELFACDLADIEQTAATLAQINEIH-PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE----  118 (234)
T ss_pred             eEEEeeCCCHHHHHHHHHHHHHhC-CCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC----
Confidence            568899999999999999998876 699999999987777888889999999999999999999999999998865    


Q ss_pred             CCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCC-hHHHHHHhh
Q 025124          103 SSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKAT  181 (257)
Q Consensus       103 ~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~  181 (257)
                          .++||++||.. ..+.+....|+++|+++++|+++++.|+. +.||++++|+||++.|++...... .........
T Consensus       119 ----~~~iv~~sS~~-~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~-~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~  192 (234)
T PRK07577        119 ----QGRIVNICSRA-IFGALDRTSYSAAKSALVGCTRTWALELA-EYGITVNAVAPGPIETELFRQTRPVGSEEEKRVL  192 (234)
T ss_pred             ----CcEEEEEcccc-ccCCCCchHHHHHHHHHHHHHHHHHHHHH-hhCcEEEEEecCcccCcccccccccchhHHHHHh
Confidence                68999999985 45667788999999999999999999998 889999999999999987543221 112222333


Q ss_pred             hhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          182 DYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       182 ~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      ...+.++..+|+|++..+++++++...+++|+.+.+|||..
T Consensus       193 ~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g~~~  233 (234)
T PRK07577        193 ASIPMRRLGTPEEVAAAIAFLLSDDAGFITGQVLGVDGGGS  233 (234)
T ss_pred             hcCCCCCCcCHHHHHHHHHHHhCcccCCccceEEEecCCcc
Confidence            44566677899999999999998877889999999999854

>PRK06182 short chain dehydrogenase; Validated

Probab=99.95  E-value=2e-26  Score=192.36  Aligned_cols=219  Identities=24%  Similarity=0.226  Sum_probs=170.7

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.    +  ..+.++.+|++|.++++.+++++.+.++++|++|||+|.....++.+.+.++++..+++|+.
T Consensus        34 ~r~~~~l~~~~----~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~  107 (273)
T PRK06182         34 ARRVDKMEDLA----S--LGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLF  107 (273)
T ss_pred             eCCHHHHHHHH----h--CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhH
Confidence            57776665442    2  24788999999999999999999999999999999999887788899999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.+++.++|.|++++        .|+||++||..+..+.+....|+++|+++++|+++++.|+. ++||++++|+||+
T Consensus       108 ~~~~~~~~~l~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~e~~-~~gi~v~~v~Pg~  178 (273)
T PRK06182        108 GAARLTQLVLPHMRAQR--------SGRIINISSMGGKIYTPLGAWYHATKFALEGFSDALRLEVA-PFGIDVVVIEPGG  178 (273)
T ss_pred             HHHHHHHHHHHHHHhcC--------CCEEEEEcchhhcCCCCCccHhHHHHHHHHHHHHHHHHHhc-ccCCEEEEEecCC
Confidence            99999999999998875        68999999998888888888999999999999999999998 8999999999999


Q ss_pred             ccCCCCCCCC---C----h---HH----HHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc--ccCC
Q 025124          162 IKDTAGVSKL---A----P---EE----IRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN--WLSN  225 (257)
Q Consensus       162 v~t~~~~~~~---~----~---~~----~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~--~~~~  225 (257)
                      ++|++.....   .    .   .+    ....+....+..++.+|+++|+.++++++...   .+..+....+.  ....
T Consensus       179 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~~~~~~---~~~~~~~g~~~~~~~~~  255 (273)
T PRK06182        179 IKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIADAISKAVTARR---PKTRYAVGFGAKPLIFL  255 (273)
T ss_pred             cccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHHhCCC---CCceeecCcchHHHHHH
Confidence            9998642110   0    0   00    11223333456678899999999999997431   12344444332  2223


Q ss_pred             CCCCcHHHHHHHH
Q 025124          226 PRDLPKEAVNQLS  238 (257)
Q Consensus       226 ~~~~~~~~~~~~~  238 (257)
                      .+++|+.+...+.
T Consensus       256 ~~~~p~~~~~~~~  268 (273)
T PRK06182        256 RRILPDRAFDRLI  268 (273)
T ss_pred             HHHCcHHHHHHHH
Confidence            4456655555443

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.95  E-value=7.2e-28  Score=187.07  Aligned_cols=193  Identities=25%  Similarity=0.293  Sum_probs=160.0

Q ss_pred             HHHHHHHhcC--CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHH
Q 025124           10 SAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC   87 (257)
Q Consensus        10 ~~~~~l~~~~--~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~   87 (257)
                      +..++|++..  ..+.+++|||++..++++.++++..++|.||++||+||+.        ++++|++++.+|+.|.++-+
T Consensus        43 ~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~iDIlINgAGi~--------~dkd~e~Ti~vNLtgvin~T  114 (261)
T KOG4169|consen   43 EAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGTIDILINGAGIL--------DDKDWERTINVNLTGVINGT  114 (261)
T ss_pred             HHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCceEEEEcccccc--------cchhHHHhhccchhhhhhhh
Confidence            4455666663  4688999999999999999999999999999999999975        36679999999999999999


Q ss_pred             HHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEecCcccCCC
Q 025124           88 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTA  166 (257)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~~gi~v~~v~Pg~v~t~~  166 (257)
                      ..++|+|.+++.|.     +|.|||+||..++.|.+-.+.|++||+++..|||+++...- ...||++++||||++.|++
T Consensus       115 ~~alpyMdk~~gG~-----GGiIvNmsSv~GL~P~p~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l  189 (261)
T KOG4169|consen  115 QLALPYMDKKQGGK-----GGIIVNMSSVAGLDPMPVFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDL  189 (261)
T ss_pred             hhhhhhhhhhcCCC-----CcEEEEeccccccCccccchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHH
Confidence            99999999987555     79999999999999999999999999999999999998742 2679999999999999886


Q ss_pred             CCCC------CChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          167 GVSK------LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       167 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                      ....      ...++......+..   ...+|++++..++.++..   ..||....++.|.
T Consensus       190 ~~~~~~~~~~~e~~~~~~~~l~~~---~~q~~~~~a~~~v~aiE~---~~NGaiw~v~~g~  244 (261)
T KOG4169|consen  190 AENIDASGGYLEYSDSIKEALERA---PKQSPACCAINIVNAIEY---PKNGAIWKVDSGS  244 (261)
T ss_pred             HHHHHhcCCcccccHHHHHHHHHc---ccCCHHHHHHHHHHHHhh---ccCCcEEEEecCc
Confidence            5322      11112222222222   246899999999999965   4799999999886

>PRK08324 short chain dehydrogenase; Validated

Probab=99.95  E-value=6.7e-26  Score=210.78  Aligned_cols=215  Identities=27%  Similarity=0.324  Sum_probs=184.5

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|+.++++++.+++... .++.++.+|++|.++++.+++++.+.+|++|++|||+|.....++.+.+.++|+..+++|+
T Consensus       452 ~~r~~~~~~~~~~~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~  530 (681)
T PRK08324        452 ADLDEEAAEAAAAELGGP-DRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNA  530 (681)
T ss_pred             EeCCHHHHHHHHHHHhcc-CcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHh
Confidence            368888888887777654 5789999999999999999999999999999999999988888888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .+++.+++.+.+.|++++.       +|+||++||..+..+.++.+.|+++|+++++++++++.++. +.||+++.|+||
T Consensus       531 ~g~~~l~~~~~~~l~~~~~-------~g~iV~vsS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gIrvn~v~Pg  602 (681)
T PRK08324        531 TGHFLVAREAVRIMKAQGL-------GGSIVFIASKNAVNPGPNFGAYGAAKAAELHLVRQLALELG-PDGIRVNGVNPD  602 (681)
T ss_pred             HHHHHHHHHHHHHHHhcCC-------CcEEEEECCccccCCCCCcHHHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeCc
Confidence            9999999999999988651       38999999999999889999999999999999999999998 899999999999


Q ss_pred             cc--cCCCCCCCC----------ChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          161 PI--KDTAGVSKL----------APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       161 ~v--~t~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      .+  .|++.....          ...+....+....++.++.+++|+++++++++++.....+|+.+.+|||....
T Consensus       603 ~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdgG~~~~  678 (681)
T PRK08324        603 AVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVFLASGLLSKTTGAIITVDGGNAAA  678 (681)
T ss_pred             eeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHHHHHhCccccCCcCCEEEECCCchhc
Confidence            99  665432211          11222234455667778899999999999999877778999999999997554

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.95  E-value=3.9e-26  Score=190.91  Aligned_cols=204  Identities=24%  Similarity=0.305  Sum_probs=167.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.+.++++.+.+   +.++.++++|++|+++++.+++++.+.++++|++|||+|.....++.+.+.++|++++++|+.
T Consensus        34 ~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~  110 (275)
T PRK08263         34 ARDTATLADLAEKY---GDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFF  110 (275)
T ss_pred             ECCHHHHHHHHHhc---cCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhH
Confidence            57777766655433   456888999999999999999999999999999999999888888889999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.+++.++|.|++++        .++||++||..+..+.+....|+++|++++++++.++.|+. ++||+++.|+||+
T Consensus       111 ~~~~l~~~~~~~~~~~~--------~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~-~~gi~v~~v~Pg~  181 (275)
T PRK08263        111 GALWVTQAVLPYLREQR--------SGHIIQISSIGGISAFPMSGIYHASKWALEGMSEALAQEVA-EFGIKVTLVEPGG  181 (275)
T ss_pred             HHHHHHHHHHHHHHhcC--------CCEEEEEcChhhcCCCCCccHHHHHHHHHHHHHHHHHHHhh-hhCcEEEEEecCC
Confidence            99999999999998865        68999999999999999999999999999999999999998 8899999999999


Q ss_pred             ccCCCCCCCCC-------hHHHHHHhhhhccCCCC-CCHHhHHHHHHHhccCCCCcccCcEEEecC
Q 025124          162 IKDTAGVSKLA-------PEEIRSKATDYMAAYKF-GEKWDIAMAALYLASDAGKYVNGNTLIVDG  219 (257)
Q Consensus       162 v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~-~~~~dva~~~~~l~~~~~~~~~G~~~~~dg  219 (257)
                      ++|++......       ............+...+ .+|+|+++.++++++...  .++..+...+
T Consensus       182 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~~~~~--~~~~~~~~~~  245 (275)
T PRK08263        182 YSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAEALLKLVDAEN--PPLRLFLGSG  245 (275)
T ss_pred             ccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHHHHHHHHcCCC--CCeEEEeCch
Confidence            99987632111       01222233334455566 899999999999997542  3455544434

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.95  E-value=3.5e-26  Score=177.69  Aligned_cols=201  Identities=22%  Similarity=0.167  Sum_probs=162.2

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHh--CCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF--GKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEI   78 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~--g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~   78 (257)
                      +|++++..+..+.......++|.+++|+++.++++.+++++.+--  .++|++|||||+.. .....+...+.|-+++++
T Consensus        36 ~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~t  115 (249)
T KOG1611|consen   36 ARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYET  115 (249)
T ss_pred             cCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhh
Confidence            577887644444444457899999999999999999999999974  48999999999765 366667778899999999


Q ss_pred             HhHHHHHHHHHHHHHHHhcCC---CCCCCCCCceEEEEccccccccc---ccchhhHHHHHHHHHHHHHHHHHhcCCCCe
Q 025124           79 DSVGTFIMCHEALKYLKKGGR---GQASSSSGGIIINISATLHYTAT---WYQIHVSAAKAAVDSITRSLALEWGTDYAI  152 (257)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~---~~~~~~~~g~ii~iss~~~~~~~---~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi  152 (257)
                      |..|+++++|+|+|++++...   +++-+..++.|||+||..+..+.   .++..|.+||+|+++|+|+++.|+. +.+|
T Consensus       116 N~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~~~~~~~~AYrmSKaAlN~f~ksls~dL~-~~~i  194 (249)
T KOG1611|consen  116 NAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGGFRPGGLSAYRMSKAALNMFAKSLSVDLK-DDHI  194 (249)
T ss_pred             cchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCCCCCcchhhhHhhHHHHHHHHHHhhhhhc-CCcE
Confidence            999999999999999997642   33344456789999987765443   3567899999999999999999999 9999


Q ss_pred             EEEEEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCC
Q 025124          153 RVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG  220 (257)
Q Consensus       153 ~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg  220 (257)
                      -|..+|||||+|+|....                 ...++|+.+..++..+..-...=+|..++.|+.
T Consensus       195 lv~sihPGwV~TDMgg~~-----------------a~ltveeSts~l~~~i~kL~~~hnG~ffn~dlt  245 (249)
T KOG1611|consen  195 LVVSIHPGWVQTDMGGKK-----------------AALTVEESTSKLLASINKLKNEHNGGFFNRDGT  245 (249)
T ss_pred             EEEEecCCeEEcCCCCCC-----------------cccchhhhHHHHHHHHHhcCcccCcceEccCCC
Confidence            999999999999987422                 246788888888777765544457888887764

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.95  E-value=1.4e-25  Score=183.24  Aligned_cols=206  Identities=32%  Similarity=0.432  Sum_probs=176.8

Q ss_pred             HHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHH
Q 025124            5 KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF   84 (257)
Q Consensus         5 ~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~   84 (257)
                      .+.+++..+.+...+.+++++.+|++|+++++++++++.+.++++|++||++|......+.+.+.+.++..+++|+.+.+
T Consensus        33 ~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~  112 (239)
T TIGR01830        33 EEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVF  112 (239)
T ss_pred             hhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHH
Confidence            35666777777777778999999999999999999999999999999999999876666778889999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccC
Q 025124           85 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD  164 (257)
Q Consensus        85 ~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t  164 (257)
                      .+.+.+.+++.+..        .++++++||..+..+.+.+..|+++|.+++.++++++.++. ..|++++.++||++.|
T Consensus       113 ~l~~~~~~~~~~~~--------~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~~~~l~~~~~-~~g~~~~~i~pg~~~~  183 (239)
T TIGR01830       113 NLTQAVLRIMIKQR--------SGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELA-SRNITVNAVAPGFIDT  183 (239)
T ss_pred             HHHHHHHHHHHhcC--------CeEEEEECCccccCCCCCCchhHHHHHHHHHHHHHHHHHHh-hcCeEEEEEEECCCCC
Confidence            99999999997755        67899999999988888999999999999999999999998 8899999999999987


Q ss_pred             CCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          165 TAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                      ++... . ............+..++.+++|+++.+++++.+...+++|+.+++++|.
T Consensus       184 ~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~g~  238 (239)
T TIGR01830       184 DMTDK-L-SEKVKKKILSQIPLGRFGTPEEVANAVAFLASDEASYITGQVIHVDGGM  238 (239)
T ss_pred             hhhhh-c-ChHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCcccCCcCCCEEEeCCCc
Confidence            75332 2 2233333344556677899999999999999877778999999999985

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.3e-26  Score=190.44  Aligned_cols=184  Identities=20%  Similarity=0.162  Sum_probs=156.1

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCC-CCCHHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAE-DLSPNGFRTVIEID   79 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~-~~~~~~~~~~~~~n   79 (257)
                      ++|+.++++++.+++...+ ++.++.+|++|.+++.++++++.++++.+|++|||+|........ +.+.++|+..+++|
T Consensus        32 ~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n  110 (257)
T PRK07024         32 VARRTDALQAFAARLPKAA-RVSVYAADVRDADALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTN  110 (257)
T ss_pred             EeCCHHHHHHHHHhcccCC-eeEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHh
Confidence            3678888887777665444 789999999999999999999999999999999999976543333 37889999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.|++.+++.++|.|.+++        .++||++||..+..+.+....|+++|++++.|+++++.|+. ++||++++|+|
T Consensus       111 ~~g~~~l~~~~l~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~-~~gi~v~~v~P  181 (257)
T PRK07024        111 YFGMVATFQPFIAPMRAAR--------RGTLVGIASVAGVRGLPGAGAYSASKAAAIKYLESLRVELR-PAGVRVVTIAP  181 (257)
T ss_pred             cHHHHHHHHHHHHHHHhcC--------CCEEEEEechhhcCCCCCCcchHHHHHHHHHHHHHHHHHhh-ccCcEEEEEec
Confidence            9999999999999998876        68999999999999999999999999999999999999998 89999999999


Q ss_pred             CcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCC
Q 025124          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (257)
Q Consensus       160 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  206 (257)
                      |+++|++....            ..+.....+|+++++.++..+...
T Consensus       182 g~v~t~~~~~~------------~~~~~~~~~~~~~a~~~~~~l~~~  216 (257)
T PRK07024        182 GYIRTPMTAHN------------PYPMPFLMDADRFAARAARAIARG  216 (257)
T ss_pred             CCCcCchhhcC------------CCCCCCccCHHHHHHHHHHHHhCC
Confidence            99998854211            011122468999999999999653

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.95  E-value=2.3e-25  Score=183.86  Aligned_cols=213  Identities=30%  Similarity=0.391  Sum_probs=178.5

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|+.+.++++.+++...+.++.++.+|++|.++++.+++++.+.++++|++||++|........+.+.++++.+++.|+
T Consensus        31 ~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~  110 (255)
T TIGR01963        31 NDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIML  110 (255)
T ss_pred             EeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHh
Confidence            36888888888888877677899999999999999999999999999999999999987666777888999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .+++.+++.+++.|++.+        .+++|++||..+..+.+.+..|+++|.+++.++++++.++. +.+|+++.++||
T Consensus       111 ~g~~~~~~~~~~~~~~~~--------~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~~~~~~~~~~~~-~~~i~v~~i~pg  181 (255)
T TIGR01963       111 TSAFHTIRAALPHMKKQG--------WGRIINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALEVA-AHGITVNAICPG  181 (255)
T ss_pred             HHHHHHHHHHHHHHHhcC--------CeEEEEEcchhhcCCCCCCchhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecC
Confidence            999999999999998765        67899999998888888899999999999999999999998 789999999999


Q ss_pred             cccCCCCCCCCC---------hHH-HHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          161 PIKDTAGVSKLA---------PEE-IRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       161 ~v~t~~~~~~~~---------~~~-~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      ++.|++......         ... .........+...+.+++|+++++++++++....++|+.+.++||+.
T Consensus       182 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~g~~  253 (255)
T TIGR01963       182 YVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLASDAAAGITGQAIVLDGGWT  253 (255)
T ss_pred             ccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcCccccCccceEEEEcCccc
Confidence            999875321110         000 11112223344568999999999999998766678999999999864

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.95  E-value=6.5e-26  Score=189.29  Aligned_cols=181  Identities=18%  Similarity=0.165  Sum_probs=159.0

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|++++++++.+.+.    ++.++.+|++|+++++.+++++.+.++++|++|||+|+....++.+.+.+++++++++|+.
T Consensus        36 ~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~  111 (273)
T PRK07825         36 DLDEALAKETAAELG----LVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVY  111 (273)
T ss_pred             ECCHHHHHHHHHHhc----cceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHH
Confidence            578888877766653    5788999999999999999999999999999999999887788889999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.+++.++|.|.+++        .|+||++||..+..+.++.+.|+++|+++.+|+++++.|+. +.||+++.|+||+
T Consensus       112 g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~l~~el~-~~gi~v~~v~Pg~  182 (273)
T PRK07825        112 GVILGSKLAAPRMVPRG--------RGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLELR-GTGVHVSVVLPSF  182 (273)
T ss_pred             HHHHHHHHHHHHHHhCC--------CCEEEEEcCccccCCCCCCcchHHHHHHHHHHHHHHHHHhh-ccCcEEEEEeCCc
Confidence            99999999999999876        68999999999999999999999999999999999999998 8999999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCC
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  206 (257)
                      +.|++.....           ........+++|+|+.++.++...
T Consensus       183 v~t~~~~~~~-----------~~~~~~~~~~~~va~~~~~~l~~~  216 (273)
T PRK07825        183 VNTELIAGTG-----------GAKGFKNVEPEDVAAAIVGTVAKP  216 (273)
T ss_pred             Ccchhhcccc-----------cccCCCCCCHHHHHHHHHHHHhCC
Confidence            9988643210           011224679999999999999754

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.2e-25  Score=186.59  Aligned_cols=193  Identities=21%  Similarity=0.187  Sum_probs=158.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|++++++.+.+.   .+.++.++.+|++|++++..+++++.+.++++|++|||||.....++.+.+.++|++.+++|+.
T Consensus        35 ~r~~~~~~~l~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~  111 (277)
T PRK06180         35 VRSEAARADFEAL---HPDRALARLLDVTDFDAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVF  111 (277)
T ss_pred             eCCHHHHHHHHhh---cCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhH
Confidence            5677666554332   2456889999999999999999999999999999999999877788889999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.++++++|+|++++        .++||++||.++..+.+++..|+++|+++++++++++.|+. ++|+++++|+||+
T Consensus       112 g~~~l~~~~~~~~~~~~--------~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~i~Pg~  182 (277)
T PRK06180        112 GAVAMTKAVLPGMRARR--------RGHIVNITSMGGLITMPGIGYYCGSKFALEGISESLAKEVA-PFGIHVTAVEPGS  182 (277)
T ss_pred             HHHHHHHHHHHHHhccC--------CCEEEEEecccccCCCCCcchhHHHHHHHHHHHHHHHHHhh-hhCcEEEEEecCC
Confidence            99999999999998875        68999999999998989999999999999999999999998 8899999999999


Q ss_pred             ccCCCCCCCCC-----hHHHHH---H---hhhhccCCCCCCHHhHHHHHHHhccCC
Q 025124          162 IKDTAGVSKLA-----PEEIRS---K---ATDYMAAYKFGEKWDIAMAALYLASDA  206 (257)
Q Consensus       162 v~t~~~~~~~~-----~~~~~~---~---~~~~~~~~~~~~~~dva~~~~~l~~~~  206 (257)
                      ++|++......     ..+...   .   .....+..++.+|+|+++.+++++...
T Consensus       183 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~  238 (277)
T PRK06180        183 FRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQAILAAVESD  238 (277)
T ss_pred             cccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHcCC
Confidence            99876432111     111111   1   111223446789999999999999754

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.95  E-value=4.3e-25  Score=183.23  Aligned_cols=212  Identities=27%  Similarity=0.390  Sum_probs=175.0

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC-CCCCCCCCCHHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n   79 (257)
                      ++|+.+.++++.+.+...  ++.++.+|++|+++++.+++++.+.++++|++||++|.. ....+...+.++|+..+++|
T Consensus        41 ~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n  118 (264)
T PRK12829         41 CDVSEAALAATAARLPGA--KVTATVADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVN  118 (264)
T ss_pred             EeCCHHHHHHHHHHHhcC--ceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHH
Confidence            357777777766665432  678999999999999999999999999999999999976 45667788999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCC-ceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSG-GIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~-g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      +.+++.+.+.+++.+...+        . ++|+++||..+..+.+.+..|+++|++++.+++.++.++. ..++++++++
T Consensus       119 ~~~~~~~~~~~~~~~~~~~--------~~~~vv~~ss~~~~~~~~~~~~y~~~K~a~~~~~~~l~~~~~-~~~i~~~~l~  189 (264)
T PRK12829        119 LNGQFYFARAAVPLLKASG--------HGGVIIALSSVAGRLGYPGRTPYAASKWAVVGLVKSLAIELG-PLGIRVNAIL  189 (264)
T ss_pred             hHHHHHHHHHHHHHHHhCC--------CCeEEEEecccccccCCCCCchhHHHHHHHHHHHHHHHHHHh-hcCeEEEEEe
Confidence            9999999999999988754        4 7799999988888888888999999999999999999998 7899999999


Q ss_pred             cCcccCCCCCCCCC---------hHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          159 PGPIKDTAGVSKLA---------PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       159 Pg~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ||++.|++....+.         ............+..++.+++|+++.+.+++++....++|+.+.++||...
T Consensus       190 pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~g~~~  263 (264)
T PRK12829        190 PGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATALFLASPAARYITGQAISVDGNVEY  263 (264)
T ss_pred             cCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEEEeCCCccc
Confidence            99999886432211         011122233334556789999999999999987667789999999999753

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.94  E-value=6.8e-26  Score=185.05  Aligned_cols=180  Identities=18%  Similarity=0.163  Sum_probs=150.5

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC------CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHH
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF------LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY   93 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   93 (257)
                      .+++++++|+++.++++++    .+.++++|++|||+|...      ...+.+.+.+.|+..+++|+.+++.+++.++|.
T Consensus        43 ~~~~~~~~Dls~~~~~~~~----~~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~  118 (235)
T PRK09009         43 DNVQWHALDVTDEAEIKQL----SEQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPK  118 (235)
T ss_pred             CceEEEEecCCCHHHHHHH----HHhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhh
Confidence            4678899999999998875    345689999999999764      245678888999999999999999999999999


Q ss_pred             HHhcCCCCCCCCCCceEEEEccccccc---ccccchhhHHHHHHHHHHHHHHHHHhcCC--CCeEEEEEecCcccCCCCC
Q 025124           94 LKKGGRGQASSSSGGIIINISATLHYT---ATWYQIHVSAAKAAVDSITRSLALEWGTD--YAIRVNGIAPGPIKDTAGV  168 (257)
Q Consensus        94 ~~~~~~~~~~~~~~g~ii~iss~~~~~---~~~~~~~Y~~sK~a~~~l~~~la~e~~~~--~gi~v~~v~Pg~v~t~~~~  168 (257)
                      |.+++        .++++++||..+..   +.+++..|+++|+++++|+++|+.|+. +  .+|+|++|+||+++|++..
T Consensus       119 ~~~~~--------~~~i~~iss~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~~~~i~v~~v~PG~v~t~~~~  189 (235)
T PRK09009        119 LKQSE--------SAKFAVISAKVGSISDNRLGGWYSYRASKAALNMFLKTLSIEWQ-RSLKHGVVLALHPGTTDTALSK  189 (235)
T ss_pred             ccccC--------CceEEEEeecccccccCCCCCcchhhhhHHHHHHHHHHHHHHhh-cccCCeEEEEEcccceecCCCc
Confidence            98765        57899998865432   345677999999999999999999987 4  6999999999999998753


Q ss_pred             CCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          169 SKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      ..          ....+.++..+|+|+++.+++++++...+.+|+.+.++||..
T Consensus       190 ~~----------~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g~~~  233 (235)
T PRK09009        190 PF----------QQNVPKGKLFTPEYVAQCLLGIIANATPAQSGSFLAYDGETL  233 (235)
T ss_pred             ch----------hhccccCCCCCHHHHHHHHHHHHHcCChhhCCcEEeeCCcCC
Confidence            21          122345667899999999999999988889999999999864

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.94  E-value=2.3e-25  Score=183.49  Aligned_cols=198  Identities=24%  Similarity=0.226  Sum_probs=159.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHHHh
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~   80 (257)
                      +|++++++++.+.+   +.++.++.+|++|.++++.+++++.+.++++|++|||+|... ..++.+.+.++|+.++++|+
T Consensus        31 ~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~  107 (248)
T PRK10538         31 GRRQERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNN  107 (248)
T ss_pred             ECCHHHHHHHHHHh---ccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhh
Confidence            57777777665554   457889999999999999999999999999999999999753 35677889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .+++.+++.++++|.+++        .++||++||..+..+.++...|+++|+++++|++.++.++. ++||++++|+||
T Consensus       108 ~~~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~-~~~i~v~~v~pg  178 (248)
T PRK10538        108 KGLVYMTRAVLPGMVERN--------HGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLH-GTAVRVTDIEPG  178 (248)
T ss_pred             HHHHHHHHHHHHHHHhcC--------CcEEEEECCcccCCCCCCCchhHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCC
Confidence            999999999999998765        68899999998888888889999999999999999999998 899999999999


Q ss_pred             cccCCCCCCC-CChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCc
Q 025124          161 PIKDTAGVSK-LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGN  213 (257)
Q Consensus       161 ~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  213 (257)
                      ++.|++.... ......  ............+|+|+|+.++++++....+..++
T Consensus       179 ~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~  230 (248)
T PRK10538        179 LVGGTEFSNVRFKGDDG--KAEKTYQNTVALTPEDVSEAVWWVATLPAHVNINT  230 (248)
T ss_pred             eecccccchhhccCcHH--HHHhhccccCCCCHHHHHHHHHHHhcCCCcccchh
Confidence            9986654321 111110  00111112245799999999999998665544443

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.94  E-value=2.6e-25  Score=189.27  Aligned_cols=213  Identities=15%  Similarity=0.076  Sum_probs=159.7

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n   79 (257)
                      ++|+.++++++.+++...+.++.++.+|+++.++++.+++++.+.+++||++|||||+... ....+.+.++|+.++++|
T Consensus        34 ~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN  113 (314)
T TIGR01289        34 ACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTN  113 (314)
T ss_pred             EeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhh
Confidence            3688888888888876556678899999999999999999999988999999999997533 334567899999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccc---------------------------------cccch
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA---------------------------------TWYQI  126 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~---------------------------------~~~~~  126 (257)
                      +.+++.+++.++|.|.++..      ..|+||++||..+..+                                 ..++.
T Consensus       114 ~~~~~~l~~~~l~~m~~~~~------~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (314)
T TIGR01289       114 HLGHFLLCNLLLDDLKNSPN------KDKRLIIVGSITGNTNTLAGNVPPKANLGDLSGLAAGFKAPIAMIDGKEFKGAK  187 (314)
T ss_pred             hhHHHHHHHHHHHHHHhCCC------CCCeEEEEecCccccccCCCcCCCcccccccccccccCCCcccccCCCCcchhh
Confidence            99999999999999987531      0379999999876421                                 12456


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcc-cCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccC
Q 025124          127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI-KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (257)
Q Consensus       127 ~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  205 (257)
                      .|++||+|+..+++.+++++..+.||++++|+||++ .|++......................+.+|++.++.+++++.+
T Consensus       188 ~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~  267 (314)
T TIGR01289       188 AYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLFPPFQKYITKGYVSEEEAGERLAQVVSD  267 (314)
T ss_pred             hHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHHHHHHHHHHhccccchhhhhhhhHHhhcC
Confidence            799999999999999999984246899999999999 5776543221100000001111123467899999999998876


Q ss_pred             CCCcccCcEEEecC
Q 025124          206 AGKYVNGNTLIVDG  219 (257)
Q Consensus       206 ~~~~~~G~~~~~dg  219 (257)
                      .....+|..+..++
T Consensus       268 ~~~~~~g~~~~~~~  281 (314)
T TIGR01289       268 PKLKKSGVYWSWGN  281 (314)
T ss_pred             cccCCCceeeecCC
Confidence            44334676665433

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.94  E-value=5.6e-25  Score=180.98  Aligned_cols=199  Identities=21%  Similarity=0.269  Sum_probs=170.2

Q ss_pred             CCCcHHHHHHHHHHHHhcC-CCeEEEEccCC--CHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLG-IPAIGLEGDVR--KREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVI   76 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~-~~~~~~~~Dls--~~~~~~~~~~~~~~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~   76 (257)
                      ++|+.++++++.+++.+.+ .++.++.+|++  +.++++.+++.+.+.++++|++|||||.... .++.+.+.+.|++.+
T Consensus        42 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~  121 (247)
T PRK08945         42 LGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVM  121 (247)
T ss_pred             EeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHH
Confidence            3688888888888887664 46777888886  8899999999999999999999999997543 567788899999999


Q ss_pred             HHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEE
Q 025124           77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (257)
Q Consensus        77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~  156 (257)
                      ++|+.+++.+++++++.|.+++        .++|+++||..+..+.+++..|+++|++++.|+++++.++. ..||++++
T Consensus       122 ~~n~~g~~~~~~~~~~~l~~~~--------~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~-~~~i~~~~  192 (247)
T PRK08945        122 QVNVNATFMLTQALLPLLLKSP--------AASLVFTSSSVGRQGRANWGAYAVSKFATEGMMQVLADEYQ-GTNLRVNC  192 (247)
T ss_pred             HHccHHHHHHHHHHHHHHHhCC--------CCEEEEEccHhhcCCCCCCcccHHHHHHHHHHHHHHHHHhc-ccCEEEEE
Confidence            9999999999999999999876        68999999999988888999999999999999999999998 88999999


Q ss_pred             EecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEec
Q 025124          157 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVD  218 (257)
Q Consensus       157 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~d  218 (257)
                      ++||++.|++....+..          ....++.+|+|+++.+.+++++.+.+++|+++...
T Consensus       193 v~pg~v~t~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  244 (247)
T PRK08945        193 INPGGTRTAMRASAFPG----------EDPQKLKTPEDIMPLYLYLMGDDSRRKNGQSFDAQ  244 (247)
T ss_pred             EecCCccCcchhhhcCc----------ccccCCCCHHHHHHHHHHHhCccccccCCeEEeCC
Confidence            99999998753221111          11235789999999999999988889999987654

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.94  E-value=3.4e-25  Score=186.79  Aligned_cols=185  Identities=18%  Similarity=0.204  Sum_probs=156.8

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCC--CHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL--SPNGFRTVIEI   78 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~--~~~~~~~~~~~   78 (257)
                      ++|+.++++++.+++.+.+.++.++.+|++|.+++.++++++.+.++++|++|||||+....++.+.  +.++++..+++
T Consensus        70 ~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~v  149 (293)
T PRK05866         70 VARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVL  149 (293)
T ss_pred             EECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHH
Confidence            3688899999998888777788999999999999999999999999999999999998766555543  45788999999


Q ss_pred             HhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccc-ccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEE
Q 025124           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (257)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~-~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v  157 (257)
                      |+.|++.++++++|.|.+++        .|+||++||.++.. +.++...|+++|+|+++|+++++.|+. ++||++++|
T Consensus       150 N~~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~p~~~~Y~asKaal~~l~~~la~e~~-~~gI~v~~v  220 (293)
T PRK05866        150 NYYAPLRLIRGLAPGMLERG--------DGHIINVATWGVLSEASPLFSVYNASKAALSAVSRVIETEWG-DRGVHSTTL  220 (293)
T ss_pred             HHHHHHHHHHHHHHHHHhcC--------CcEEEEECChhhcCCCCCCcchHHHHHHHHHHHHHHHHHHhc-ccCcEEEEE
Confidence            99999999999999998876        68999999976654 356778999999999999999999998 899999999


Q ss_pred             ecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccC
Q 025124          158 APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (257)
Q Consensus       158 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  205 (257)
                      +||+++|++......          ... ....+|+++|+.++..+..
T Consensus       221 ~pg~v~T~~~~~~~~----------~~~-~~~~~pe~vA~~~~~~~~~  257 (293)
T PRK05866        221 YYPLVATPMIAPTKA----------YDG-LPALTADEAAEWMVTAART  257 (293)
T ss_pred             EcCcccCcccccccc----------ccC-CCCCCHHHHHHHHHHHHhc
Confidence            999999987532110          001 1246999999999998864

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.94  E-value=6.3e-25  Score=179.34  Aligned_cols=201  Identities=27%  Similarity=0.289  Sum_probs=171.3

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++..+..+.+.+.  .+..+.+|++|.++++.+++++.++++++|++||++|......+.+.+.+++++.+++|+.
T Consensus        38 ~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~  115 (239)
T PRK12828         38 GRGAAPLSQTLPGVPAD--ALRIGGIDLVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVK  115 (239)
T ss_pred             eCChHhHHHHHHHHhhc--CceEEEeecCCHHHHHHHHHHHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhch
Confidence            57777776666666543  4667889999999999999999999999999999999776667778899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.+++++++.+.+++        .++||++||..+..+.+....|+++|++++.++++++.++. +.||+++.++||+
T Consensus       116 ~~~~~~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~y~~sk~a~~~~~~~~a~~~~-~~~i~~~~i~pg~  186 (239)
T PRK12828        116 TTLNASKAALPALTASG--------GGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELL-DRGITVNAVLPSI  186 (239)
T ss_pred             hHHHHHHHHHHHHHhcC--------CCEEEEECchHhccCCCCcchhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecCc
Confidence            99999999999998765        68999999999888888889999999999999999999998 8899999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +.|++.......          .....+.+++|+++.+++++++...+++|+.+.++||+.+
T Consensus       187 v~~~~~~~~~~~----------~~~~~~~~~~dva~~~~~~l~~~~~~~~g~~~~~~g~~~~  238 (239)
T PRK12828        187 IDTPPNRADMPD----------ADFSRWVTPEQIAAVIAFLLSDEAQAITGASIPVDGGVAL  238 (239)
T ss_pred             ccCcchhhcCCc----------hhhhcCCCHHHHHHHHHHHhCcccccccceEEEecCCEeC
Confidence            998743222111          1123467899999999999998777899999999999754

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.94  E-value=8.6e-25  Score=183.14  Aligned_cols=223  Identities=20%  Similarity=0.204  Sum_probs=176.2

Q ss_pred             CCcHHHHHHHHHHHHhcC--CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~--~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      +|+.+.++++.+++...+  .+++++.+|++|+++++. ++++.+.++++|++|||+|......+.+.+.+++++.+++|
T Consensus        34 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n  112 (280)
T PRK06914         34 MRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETN  112 (280)
T ss_pred             eCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHh
Confidence            678888888877776553  578999999999999999 99999999999999999998777778888999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.+++.+++++++.|++.+        .++||++||..+..+.++...|+++|+++++|+++++.++. ++||+++.++|
T Consensus       113 ~~~~~~l~~~~~~~~~~~~--------~~~iv~vsS~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~-~~~i~v~~v~p  183 (280)
T PRK06914        113 VFGAISVTQAVLPYMRKQK--------SGKIINISSISGRVGFPGLSPYVSSKYALEGFSESLRLELK-PFGIDVALIEP  183 (280)
T ss_pred             hHHHHHHHHHHHHHHHhcC--------CCEEEEECcccccCCCCCCchhHHhHHHHHHHHHHHHHHhh-hhCCEEEEEec
Confidence            9999999999999998765        68899999999998989999999999999999999999998 88999999999


Q ss_pred             CcccCCCCCCCCC-------h----HHHHHHhhh--hccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc--ccC
Q 025124          160 GPIKDTAGVSKLA-------P----EEIRSKATD--YMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN--WLS  224 (257)
Q Consensus       160 g~v~t~~~~~~~~-------~----~~~~~~~~~--~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~--~~~  224 (257)
                      |.++|++......       .    .........  ..+..++.+|+|+++++++++++...   +..+.++++.  .+.
T Consensus       184 g~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~---~~~~~~~~~~~~~~~  260 (280)
T PRK06914        184 GSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDVANLIVEIAESKRP---KLRYPIGKGVKLMIL  260 (280)
T ss_pred             CCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHcCCCC---CcccccCCchHHHHH
Confidence            9999986432110       0    011111111  12345678999999999999986433   2456665443  333


Q ss_pred             CCCCCcHHHHHHH
Q 025124          225 NPRDLPKEAVNQL  237 (257)
Q Consensus       225 ~~~~~~~~~~~~~  237 (257)
                      -...+|+.+++.+
T Consensus       261 ~~~~~p~~~~~~~  273 (280)
T PRK06914        261 AKKILPWRLWEYL  273 (280)
T ss_pred             HHHhcCHHHHHHH
Confidence            3445666555544

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.94  E-value=4.2e-25  Score=184.83  Aligned_cols=190  Identities=20%  Similarity=0.210  Sum_probs=153.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHh-CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      +|+.+.++++.    +.  .+.++.+|++|.++++.+++++.+.+ +++|++|||||......+.+.+.++++..+++|+
T Consensus        35 ~r~~~~~~~l~----~~--~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~  108 (277)
T PRK05993         35 CRKEEDVAALE----AE--GLEAFQLDYAEPESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANF  108 (277)
T ss_pred             ECCHHHHHHHH----HC--CceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHh
Confidence            57776665443    22  47789999999999999999998776 6899999999988888888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .|++.+++.++|.|.+++        .|+||++||..+..+.++.+.|+++|+++++|+++++.|+. ++||++++|+||
T Consensus       109 ~g~~~~~~~~l~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~el~-~~gi~v~~v~Pg  179 (277)
T PRK05993        109 FGWHDLTRRVIPVMRKQG--------QGRIVQCSSILGLVPMKYRGAYNASKFAIEGLSLTLRMELQ-GSGIHVSLIEPG  179 (277)
T ss_pred             HHHHHHHHHHHHHHhhcC--------CCEEEEECChhhcCCCCccchHHHHHHHHHHHHHHHHHHhh-hhCCEEEEEecC
Confidence            999999999999999876        68999999999998888999999999999999999999999 899999999999


Q ss_pred             cccCCCCCCCCCh------------HH-H---HHHhhh-hccCCCCCCHHhHHHHHHHhccCC
Q 025124          161 PIKDTAGVSKLAP------------EE-I---RSKATD-YMAAYKFGEKWDIAMAALYLASDA  206 (257)
Q Consensus       161 ~v~t~~~~~~~~~------------~~-~---~~~~~~-~~~~~~~~~~~dva~~~~~l~~~~  206 (257)
                      +++|++.......            .+ .   ...... ..+.....+|+++++.++..+...
T Consensus       180 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~~a~~~~  242 (277)
T PRK05993        180 PIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGPEAVYAVLLHALTAP  242 (277)
T ss_pred             CccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCCHHHHHHHHHHHHcCC
Confidence            9999865322100            00 0   000001 111122468999999999998653

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.94  E-value=4.8e-25  Score=187.84  Aligned_cols=180  Identities=18%  Similarity=0.172  Sum_probs=147.4

Q ss_pred             CCCcHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHHHhC--CccEEEeCCCCCCC--CCCCCCCHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFG--KLDILVNAAAGNFL--VPAEDLSPNGFRT   74 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~g--~id~li~~ag~~~~--~~~~~~~~~~~~~   74 (257)
                      ++|++++++++.+++.+.  +.++..+.+|+++  ++.+.++++.+.++  ++|++|||||+...  ..+.+.+.+++++
T Consensus        83 ~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~  160 (320)
T PLN02780         83 VARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKN  160 (320)
T ss_pred             EECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHH
Confidence            479999999999998765  3468889999985  33444555555555  46699999997643  4678889999999


Q ss_pred             HHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccc-c-cccchhhHHHHHHHHHHHHHHHHHhcCCCCe
Q 025124           75 VIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-A-TWYQIHVSAAKAAVDSITRSLALEWGTDYAI  152 (257)
Q Consensus        75 ~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~-~-~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi  152 (257)
                      ++++|+.|++.++++++|.|.+++        .|+||++||..+.. + .++.+.|++||+|+++|+++++.|+. ++||
T Consensus       161 ~~~vN~~g~~~l~~~~lp~m~~~~--------~g~IV~iSS~a~~~~~~~p~~~~Y~aSKaal~~~~~~L~~El~-~~gI  231 (320)
T PLN02780        161 LIKVNVEGTTKVTQAVLPGMLKRK--------KGAIINIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYK-KSGI  231 (320)
T ss_pred             HHHHhHHHHHHHHHHHHHHHHhcC--------CcEEEEEechhhccCCCCccchHHHHHHHHHHHHHHHHHHHHh-ccCe
Confidence            999999999999999999999876        79999999998864 3 57889999999999999999999999 8999


Q ss_pred             EEEEEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhcc
Q 025124          153 RVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  204 (257)
Q Consensus       153 ~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  204 (257)
                      +|++|+||+++|++.....            .. ....+|+++|+.++..+.
T Consensus       232 ~V~~v~PG~v~T~~~~~~~------------~~-~~~~~p~~~A~~~~~~~~  270 (320)
T PLN02780        232 DVQCQVPLYVATKMASIRR------------SS-FLVPSSDGYARAALRWVG  270 (320)
T ss_pred             EEEEEeeCceecCcccccC------------CC-CCCCCHHHHHHHHHHHhC
Confidence            9999999999998643110            00 113589999999999885

>PRK06196 oxidoreductase; Provisional

Probab=99.94  E-value=8.8e-25  Score=186.17  Aligned_cols=203  Identities=18%  Similarity=0.149  Sum_probs=156.1

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|+.++++++.+++.    ++.++.+|++|.++++++++++.+.++++|+||||||....  ..+.+.++|+..+++|+
T Consensus        56 ~~R~~~~~~~~~~~l~----~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~--~~~~~~~~~~~~~~vN~  129 (315)
T PRK06196         56 PARRPDVAREALAGID----GVEVVMLDLADLESVRAFAERFLDSGRRIDILINNAGVMAC--PETRVGDGWEAQFATNH  129 (315)
T ss_pred             EeCCHHHHHHHHHHhh----hCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEEECCCCCCC--CCccCCccHHHHHHHhh
Confidence            3688888887777664    37889999999999999999999999999999999997543  23557788999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccc------------ccccchhhHHHHHHHHHHHHHHHHHhcC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT------------ATWYQIHVSAAKAAVDSITRSLALEWGT  148 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~  148 (257)
                      .+++.++++++|.|.+++        .++||++||.....            +.+++..|++||++++.|++.++.++. 
T Consensus       130 ~g~~~l~~~ll~~l~~~~--------~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~-  200 (315)
T PRK06196        130 LGHFALVNLLWPALAAGA--------GARVVALSSAGHRRSPIRWDDPHFTRGYDKWLAYGQSKTANALFAVHLDKLGK-  200 (315)
T ss_pred             HHHHHHHHHHHHHHHhcC--------CCeEEEECCHHhccCCCCccccCccCCCChHHHHHHHHHHHHHHHHHHHHHhc-
Confidence            999999999999998865        58999999976532            234557899999999999999999998 


Q ss_pred             CCCeEEEEEecCcccCCCCCCCCChHHHH-HHhh-hhccCC-CCCCHHhHHHHHHHhccCCCCcccCcEEEec
Q 025124          149 DYAIRVNGIAPGPIKDTAGVSKLAPEEIR-SKAT-DYMAAY-KFGEKWDIAMAALYLASDAGKYVNGNTLIVD  218 (257)
Q Consensus       149 ~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~~~~-~~~~~~-~~~~~~dva~~~~~l~~~~~~~~~G~~~~~d  218 (257)
                      ++||++++|+||++.|++........... .... ...++. ++.+|+++|..++++++.......|..+..|
T Consensus       201 ~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~g~~~~~  273 (315)
T PRK06196        201 DQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKTPAQGAATQVWAATSPQLAGMGGLYCED  273 (315)
T ss_pred             CCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCCHhHHHHHHHHHhcCCccCCCCCeEeCC
Confidence            88999999999999998754321111110 0110 011222 4679999999999999754433344455444

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.7e-24  Score=179.69  Aligned_cols=196  Identities=19%  Similarity=0.244  Sum_probs=163.4

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.+.+...+.++.++.+|+++++++..+++++.+.++++|++|||||......+.+.+.++++..+++|+.
T Consensus        41 ~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~  120 (274)
T PRK07775         41 ARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLV  120 (274)
T ss_pred             eCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhH
Confidence            57777788887777777778999999999999999999999999999999999999877777888899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++++++++++.|.++.        .++||++||..+..+.++...|+++|+++++++++++.++. +.||++++|+||.
T Consensus       121 ~~~~l~~~~l~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~~~~~~~-~~gi~v~~v~pG~  191 (274)
T PRK07775        121 GANRLATAVLPGMIERR--------RGDLIFVGSDVALRQRPHMGAYGAAKAGLEAMVTNLQMELE-GTGVRASIVHPGP  191 (274)
T ss_pred             HHHHHHHHHHHHHHhcC--------CceEEEECChHhcCCCCCcchHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeCCc
Confidence            99999999999998765        68899999998888888888999999999999999999998 8899999999999


Q ss_pred             ccCCCCCCCCCh--HHHHHHhh--hhccCCCCCCHHhHHHHHHHhccCC
Q 025124          162 IKDTAGVSKLAP--EEIRSKAT--DYMAAYKFGEKWDIAMAALYLASDA  206 (257)
Q Consensus       162 v~t~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~dva~~~~~l~~~~  206 (257)
                      ++|++.......  ........  ......++.+++|++++++++++..
T Consensus       192 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~  240 (274)
T PRK07775        192 TLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARAITFVAETP  240 (274)
T ss_pred             ccCcccccCChhhhhHHHHHHHHhcccccccccCHHHHHHHHHHHhcCC
Confidence            998854322111  01111111  1112345789999999999999753

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.94  E-value=2.3e-24  Score=176.47  Aligned_cols=188  Identities=23%  Similarity=0.270  Sum_probs=163.3

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|+.++++++.+++...+.++.++.+|++++++++.+++++.++++++|++|||+|......+.+.+.++|++.+++|+
T Consensus        37 ~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~  116 (239)
T PRK07666         37 LARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNL  116 (239)
T ss_pred             EeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHh
Confidence            36888888888888877677899999999999999999999999999999999999987667788889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .+++.+++++.+.|.++.        .+++|++||..+..+.++...|+.+|+++..+++.++.|+. +.||+++.|+||
T Consensus       117 ~~~~~l~~~~~~~~~~~~--------~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~-~~gi~v~~v~pg  187 (239)
T PRK07666        117 MGVYYATRAVLPSMIERQ--------SGDIINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQEVR-KHNIRVTALTPS  187 (239)
T ss_pred             HHHHHHHHHHHHHHHhCC--------CcEEEEEcchhhccCCCCCcchHHHHHHHHHHHHHHHHHhh-ccCcEEEEEecC
Confidence            999999999999998866        68899999999998988889999999999999999999998 889999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCC
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  206 (257)
                      .+.|++.......        .. ....+.+++|+++.++.+++..
T Consensus       188 ~v~t~~~~~~~~~--------~~-~~~~~~~~~~~a~~~~~~l~~~  224 (239)
T PRK07666        188 TVATDMAVDLGLT--------DG-NPDKVMQPEDLAEFIVAQLKLN  224 (239)
T ss_pred             cccCcchhhcccc--------cc-CCCCCCCHHHHHHHHHHHHhCC
Confidence            9998864321100        11 1234678999999999999753

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.6e-24  Score=179.66  Aligned_cols=189  Identities=26%  Similarity=0.167  Sum_probs=158.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHH-hCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH-FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~-~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      +|+.+.++++.+.+.  +.+++++.+|++|.+++.++++.+.+. ++++|++|||||......+.+.+.++++.++++|+
T Consensus        32 ~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~  109 (260)
T PRK08267         32 DINEAGLAALAAELG--AGNAWTGALDVTDRAAWDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINV  109 (260)
T ss_pred             eCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHh
Confidence            578887777766654  467899999999999999999998877 78999999999987778888899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .+++.+++++.++|++++        .++||++||..+..+.++...|+.+|+++++|+++++.++. ++||++++|+||
T Consensus       110 ~~~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~~~~-~~~i~v~~i~pg  180 (260)
T PRK08267        110 KGVLNGAHAALPYLKATP--------GARVINTSSASAIYGQPGLAVYSATKFAVRGLTEALDLEWR-RHGIRVADVMPL  180 (260)
T ss_pred             HHHHHHHHHHHHHHHhCC--------CCEEEEeCchhhCcCCCCchhhHHHHHHHHHHHHHHHHHhc-ccCcEEEEEecC
Confidence            999999999999998876        68999999999999999999999999999999999999998 889999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccC
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  205 (257)
                      ++.|++..... ..... ....  ......+|+++++.++.++..
T Consensus       181 ~~~t~~~~~~~-~~~~~-~~~~--~~~~~~~~~~va~~~~~~~~~  221 (260)
T PRK08267        181 FVDTAMLDGTS-NEVDA-GSTK--RLGVRLTPEDVAEAVWAAVQH  221 (260)
T ss_pred             CcCCccccccc-chhhh-hhHh--hccCCCCHHHHHHHHHHHHhC
Confidence            99988654311 11111 1111  122347899999999999953

>PRK09135 pteridine reductase; Provisional

Probab=99.93  E-value=7.1e-24  Score=174.27  Aligned_cols=209  Identities=29%  Similarity=0.385  Sum_probs=171.8

Q ss_pred             CCc-HHHHHHHHHHHHhc-CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            2 GRR-KTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         2 ~r~-~~~l~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      +|+ .+.++.+.+.+... +..+.++.+|+++.+++..+++++.+.++++|++|||+|.....++.+.+.++++..+++|
T Consensus        37 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n  116 (249)
T PRK09135         37 YHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASN  116 (249)
T ss_pred             cCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHh
Confidence            443 45566666666654 3468899999999999999999999999999999999998777777788899999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.+++.+.+++.+.+.++         .+.++++++..+..+.++...|+++|++++.++++++.++. + ++++++++|
T Consensus       117 ~~g~~~l~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~-~-~i~~~~v~p  185 (249)
T PRK09135        117 LKAPFFLSQAAAPQLRKQ---------RGAIVNITDIHAERPLKGYPVYCAAKAALEMLTRSLALELA-P-EVRVNAVAP  185 (249)
T ss_pred             chhHHHHHHHHHHHHhhC---------CeEEEEEeChhhcCCCCCchhHHHHHHHHHHHHHHHHHHHC-C-CCeEEEEEe
Confidence            999999999999998764         47888888877777778889999999999999999999986 4 799999999


Q ss_pred             CcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       160 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      |++.|++....+. ...........+..+..+++|+++++.+++.+ ....+|+.+.+++|..+
T Consensus       186 g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~-~~~~~g~~~~i~~g~~~  247 (249)
T PRK09135        186 GAILWPEDGNSFD-EEARQAILARTPLKRIGTPEDIAEAVRFLLAD-ASFITGQILAVDGGRSL  247 (249)
T ss_pred             ccccCccccccCC-HHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCc-cccccCcEEEECCCeec
Confidence            9999987543332 22333333444566678999999999888864 45679999999999643

>PRK06194 hypothetical protein; Provisional

Probab=99.93  E-value=2.6e-24  Score=180.85  Aligned_cols=201  Identities=15%  Similarity=0.120  Sum_probs=161.5

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.+.+++..+++...+.++.++.+|++|.++++.+++++.+.++++|+||||||.....++.+.+.++|+..+++|+.
T Consensus        37 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~  116 (287)
T PRK06194         37 DVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLW  116 (287)
T ss_pred             eCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccH
Confidence            67788888888888776778999999999999999999999999999999999999887788888999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEecC
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPG  160 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~~gi~v~~v~Pg  160 (257)
                      |++.++++++|.|.++....  ....|+||++||..+..+.++.+.|+++|++++.|+++++.|+. ...+||++.++||
T Consensus       117 g~~~~~~~~~~~~~~~~~~~--~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg  194 (287)
T PRK06194        117 GVIHGVRAFTPLMLAAAEKD--PAYEGHIVNTASMAGLLAPPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPY  194 (287)
T ss_pred             HHHHHHHHHHHHHHhcCCCC--CCCCeEEEEeCChhhccCCCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeC
Confidence            99999999999999865210  00127899999999998888899999999999999999999986 2357999999999


Q ss_pred             cccCCCCCCCCCh-HH------------HHHHhhhhccCCCCCCHHhHHHHHHHhcc
Q 025124          161 PIKDTAGVSKLAP-EE------------IRSKATDYMAAYKFGEKWDIAMAALYLAS  204 (257)
Q Consensus       161 ~v~t~~~~~~~~~-~~------------~~~~~~~~~~~~~~~~~~dva~~~~~l~~  204 (257)
                      ++.|++....... ..            ...............+++|+|+.++.++.
T Consensus       195 ~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~dva~~i~~~~~  251 (287)
T PRK06194        195 FVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQKAVGSGKVTAEEVAQLVFDAIR  251 (287)
T ss_pred             cccCccccccccCchhcccCccccchhhHHHHHHHhhhhccCCCHHHHHHHHHHHHH
Confidence            9998865432110 00            01111111111123699999999999874

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.93  E-value=8.2e-25  Score=180.32  Aligned_cols=193  Identities=16%  Similarity=0.161  Sum_probs=158.0

Q ss_pred             CCCeEEEEccCCCHHHHHHHHHHHHHHhCC--cc--EEEeCCCCCC-CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHH
Q 025124           19 GIPAIGLEGDVRKREDAVRVVESTINHFGK--LD--ILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY   93 (257)
Q Consensus        19 ~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~--id--~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   93 (257)
                      +.+++++.+|++|.++++.+++++.+.++.  ++  ++|||+|... ..++.+.+.++|...+++|+.+++.+++.++++
T Consensus        47 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  126 (251)
T PRK06924         47 NSNLTFHSLDLQDVHELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKH  126 (251)
T ss_pred             CCceEEEEecCCCHHHHHHHHHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHH
Confidence            567889999999999999999999887653  22  8999999654 367888999999999999999999999999999


Q ss_pred             HHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEecCcccCCCCCCCC-
Q 025124           94 LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKL-  171 (257)
Q Consensus        94 ~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~~gi~v~~v~Pg~v~t~~~~~~~-  171 (257)
                      |.+.+.       .++||++||..+..+.++...|+++|+++++|++.++.|+. .+.||+|++|.||++.|++..... 
T Consensus       127 ~~~~~~-------~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~  199 (251)
T PRK06924        127 TKDWKV-------DKRVINISSGAAKNPYFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRS  199 (251)
T ss_pred             HhccCC-------CceEEEecchhhcCCCCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHh
Confidence            987431       47899999999988889999999999999999999999975 256899999999999988643210 


Q ss_pred             -ChH--HHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecC
Q 025124          172 -APE--EIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDG  219 (257)
Q Consensus       172 -~~~--~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dg  219 (257)
                       ...  ...+.+....+.+++.+|+|+++.+++++++. .+.+|+.+.+++
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~-~~~~G~~~~v~~  249 (251)
T PRK06924        200 SSKEDFTNLDRFITLKEEGKLLSPEYVAKALRNLLETE-DFPNGEVIDIDE  249 (251)
T ss_pred             cCcccchHHHHHHHHhhcCCcCCHHHHHHHHHHHHhcc-cCCCCCEeehhh
Confidence             001  11223333445678899999999999999874 788999988875

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.9e-24  Score=179.44  Aligned_cols=194  Identities=25%  Similarity=0.286  Sum_probs=163.0

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCC-CHHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL-SPNGFRTVIEID   79 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~-~~~~~~~~~~~n   79 (257)
                      ++|+.++++++.+++...+.++.++.+|++|.++++.+++++.++++++|++|||+|......+.+. +.+++++.+++|
T Consensus        31 ~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N  110 (263)
T PRK06181         31 AARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVN  110 (263)
T ss_pred             EeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHh
Confidence            3678888888888887777789999999999999999999999999999999999998777777788 899999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.+++.+.+.+++.|.+.         .+++|++||..+..+.++...|+++|+++++++++++.++. ++||+++++.|
T Consensus       111 ~~~~~~l~~~~~~~~~~~---------~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~-~~~i~~~~i~p  180 (263)
T PRK06181        111 YLGAVYCTHAALPHLKAS---------RGQIVVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRIELA-DDGVAVTVVCP  180 (263)
T ss_pred             hHHHHHHHHHHHHHHHhc---------CCEEEEEecccccCCCCCccHHHHHHHHHHHHHHHHHHHhh-hcCceEEEEec
Confidence            999999999999998764         47899999999988888899999999999999999999998 88999999999


Q ss_pred             CcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccC
Q 025124          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (257)
Q Consensus       160 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  205 (257)
                      |++.|++.......... ...........+++|+|+++.+++++..
T Consensus       181 g~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~dva~~i~~~~~~  225 (263)
T PRK06181        181 GFVATDIRKRALDGDGK-PLGKSPMQESKIMSAEECAEAILPAIAR  225 (263)
T ss_pred             CccccCcchhhcccccc-ccccccccccCCCCHHHHHHHHHHHhhC
Confidence            99998865432211100 0000111123678999999999999974

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.93  E-value=3.2e-26  Score=170.66  Aligned_cols=201  Identities=24%  Similarity=0.350  Sum_probs=170.4

Q ss_pred             HhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC------CCCCCCCHHHHHHHHHHHhHHHHHHHHH
Q 025124           16 HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL------VPAEDLSPNGFRTVIEIDSVGTFIMCHE   89 (257)
Q Consensus        16 ~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~------~~~~~~~~~~~~~~~~~n~~~~~~l~~~   89 (257)
                      .+.|.++.+.++|++++.+++..++..+.+||++|.+|||||+...      ..-...+.++|++++++|+.|+|+.+++
T Consensus        51 kelg~~~vf~padvtsekdv~aala~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl  130 (260)
T KOG1199|consen   51 KELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRL  130 (260)
T ss_pred             HHhCCceEEeccccCcHHHHHHHHHHHHhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeee
Confidence            3447889999999999999999999999999999999999996543      2234458899999999999999999999


Q ss_pred             HHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCC
Q 025124           90 ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS  169 (257)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~  169 (257)
                      -.-.|.+....+  ...+|.||+..|.++..+..+++.|++||.++.+|+.-+++++. ..|||++.|.||.++||++..
T Consensus       131 ~aglmg~nepdq--~gqrgviintasvaafdgq~gqaaysaskgaivgmtlpiardla-~~gir~~tiapglf~tpllss  207 (260)
T KOG1199|consen  131 GAGLMGENEPDQ--NGQRGVIINTASVAAFDGQTGQAAYSASKGAIVGMTLPIARDLA-GDGIRFNTIAPGLFDTPLLSS  207 (260)
T ss_pred             hhhhhcCCCCCC--CCcceEEEeeceeeeecCccchhhhhcccCceEeeechhhhhcc-cCceEEEeecccccCChhhhh
Confidence            999998764322  11279999999999999999999999999999999999999999 999999999999999997644


Q ss_pred             CCChHHHHHHhhhhccC-CCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          170 KLAPEEIRSKATDYMAA-YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       170 ~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      -  ++..........|. .+++.|.|-++.+..++.  ..++||.+|.+||-..+
T Consensus       208 l--pekv~~fla~~ipfpsrlg~p~eyahlvqaiie--np~lngevir~dgalrm  258 (260)
T KOG1199|consen  208 L--PEKVKSFLAQLIPFPSRLGHPHEYAHLVQAIIE--NPYLNGEVIRFDGALRM  258 (260)
T ss_pred             h--hHHHHHHHHHhCCCchhcCChHHHHHHHHHHHh--CcccCCeEEEecceecC
Confidence            3  34455555566664 468999999999999994  57899999999997654

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.6e-24  Score=178.95  Aligned_cols=182  Identities=16%  Similarity=0.127  Sum_probs=150.5

Q ss_pred             CCcHHH-HHHHHHHHHhcCC-CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            2 GRRKTV-LRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         2 ~r~~~~-l~~~~~~l~~~~~-~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      +|+.++ ++++.+++.+.+. +++++.+|++|.++++++++++.+ ++++|++|||+|......-...+.+++.+++++|
T Consensus        40 ~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN  118 (253)
T PRK07904         40 ALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-GGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEIN  118 (253)
T ss_pred             eCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-cCCCCEEEEeeecCCchhhcccCHHHHHHHHHHH
Confidence            577776 8888888887654 789999999999999999999886 5899999999997543211112445566789999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.+++.++++++|.|.+++        .++|+++||..+..+.++...|++||+|+.+|+++++.|+. ++||+++.|+|
T Consensus       119 ~~~~~~l~~~l~~~~~~~~--------~~~iv~isS~~g~~~~~~~~~Y~~sKaa~~~~~~~l~~el~-~~~i~v~~v~P  189 (253)
T PRK07904        119 YTAAVSVGVLLGEKMRAQG--------FGQIIAMSSVAGERVRRSNFVYGSTKAGLDGFYLGLGEALR-EYGVRVLVVRP  189 (253)
T ss_pred             hHhHHHHHHHHHHHHHhcC--------CceEEEEechhhcCCCCCCcchHHHHHHHHHHHHHHHHHHh-hcCCEEEEEee
Confidence            9999999999999999876        68999999998877777888999999999999999999998 89999999999


Q ss_pred             CcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCC
Q 025124          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (257)
Q Consensus       160 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  206 (257)
                      |+++|++.....             ......+|+++|+.++..+.+.
T Consensus       190 g~v~t~~~~~~~-------------~~~~~~~~~~~A~~i~~~~~~~  223 (253)
T PRK07904        190 GQVRTRMSAHAK-------------EAPLTVDKEDVAKLAVTAVAKG  223 (253)
T ss_pred             CceecchhccCC-------------CCCCCCCHHHHHHHHHHHHHcC
Confidence            999997653211             0112468999999999999653

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.93  E-value=3.3e-24  Score=170.82  Aligned_cols=164  Identities=18%  Similarity=0.261  Sum_probs=140.1

Q ss_pred             EEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCC
Q 025124           24 GLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQAS  103 (257)
Q Consensus        24 ~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~  103 (257)
                      .++||++|.+++++++++    ++++|++|||+|.....++.+.+.++|++.+++|+.+++++++++.|+|.+       
T Consensus        35 ~~~~D~~~~~~~~~~~~~----~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------  103 (199)
T PRK07578         35 DVQVDITDPASIRALFEK----VGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND-------  103 (199)
T ss_pred             ceEecCCChHHHHHHHHh----cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------
Confidence            468999999999988765    478999999999877778888999999999999999999999999999975       


Q ss_pred             CCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHHHHhhhh
Q 025124          104 SSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY  183 (257)
Q Consensus       104 ~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~  183 (257)
                         .|.|+++||..+..+.+++..|+++|+++++|+++++.|+  ++||++++|+||++.|++...           ...
T Consensus       104 ---~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~--~~gi~v~~i~Pg~v~t~~~~~-----------~~~  167 (199)
T PRK07578        104 ---GGSFTLTSGILSDEPIPGGASAATVNGALEGFVKAAALEL--PRGIRINVVSPTVLTESLEKY-----------GPF  167 (199)
T ss_pred             ---CCeEEEEcccccCCCCCCchHHHHHHHHHHHHHHHHHHHc--cCCeEEEEEcCCcccCchhhh-----------hhc
Confidence               5789999999999888999999999999999999999998  569999999999999874210           011


Q ss_pred             ccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEe
Q 025124          184 MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIV  217 (257)
Q Consensus       184 ~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~  217 (257)
                      .+.....+|+|+|+.++++++.   ..+|+++.+
T Consensus       168 ~~~~~~~~~~~~a~~~~~~~~~---~~~g~~~~~  198 (199)
T PRK07578        168 FPGFEPVPAARVALAYVRSVEG---AQTGEVYKV  198 (199)
T ss_pred             CCCCCCCCHHHHHHHHHHHhcc---ceeeEEecc
Confidence            2233568999999999999963   478888765

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.4e-24  Score=180.90  Aligned_cols=177  Identities=25%  Similarity=0.284  Sum_probs=150.6

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      +++++.+|++|+++++++++.+.+.++++|++|||+|......+.+.+.++++.++++|+.+++.+++.+++.|++++  
T Consensus        46 ~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~--  123 (270)
T PRK06179         46 GVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG--  123 (270)
T ss_pred             CCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--
Confidence            577899999999999999999999999999999999988778888899999999999999999999999999999876  


Q ss_pred             CCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChH------
Q 025124          101 QASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE------  174 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~------  174 (257)
                            .++||++||..+..+.+..+.|+++|+++++|+++++.|+. ++||++++|+||++.|++........      
T Consensus       124 ------~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~el~-~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~  196 (270)
T PRK06179        124 ------SGRIINISSVLGFLPAPYMALYAASKHAVEGYSESLDHEVR-QFGIRVSLVEPAYTKTNFDANAPEPDSPLAEY  196 (270)
T ss_pred             ------CceEEEECCccccCCCCCccHHHHHHHHHHHHHHHHHHHHh-hhCcEEEEEeCCCcccccccccCCCCCcchhh
Confidence                  68999999999998988999999999999999999999999 89999999999999998654322110      


Q ss_pred             -HHHHHhhh--hccCCCCCCHHhHHHHHHHhccCC
Q 025124          175 -EIRSKATD--YMAAYKFGEKWDIAMAALYLASDA  206 (257)
Q Consensus       175 -~~~~~~~~--~~~~~~~~~~~dva~~~~~l~~~~  206 (257)
                       ........  .....+..+|+++++.++.++...
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~  231 (270)
T PRK06179        197 DRERAVVSKAVAKAVKKADAPEVVADTVVKAALGP  231 (270)
T ss_pred             HHHHHHHHHHHHhccccCCCHHHHHHHHHHHHcCC
Confidence             00000000  112345678999999999999754

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.93  E-value=5e-24  Score=176.99  Aligned_cols=187  Identities=18%  Similarity=0.231  Sum_probs=159.1

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|+.++++++.+++ ..+.++.++.+|++|.++++.+++.+.+ ++++|++|||||.....++.+.+.++++..+++|+
T Consensus        35 ~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~  112 (263)
T PRK09072         35 VGRNAEKLEALAARL-PYPGRHRWVVADLTSEAGREAVLARARE-MGGINVLINNAGVNHFALLEDQDPEAIERLLALNL  112 (263)
T ss_pred             EECCHHHHHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHh-cCCCCEEEECCCCCCccccccCCHHHHHHHHhhhh
Confidence            368888888887777 4466899999999999999999999876 78999999999987777788899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .|++.+++.++++|.+++        .++|+++||..+..+.++...|+++|+++.+++++++.|+. +.||+++.|+||
T Consensus       113 ~g~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~Pg  183 (263)
T PRK09072        113 TAPMQLTRALLPLLRAQP--------SAMVVNVGSTFGSIGYPGYASYCASKFALRGFSEALRRELA-DTGVRVLYLAPR  183 (263)
T ss_pred             HHHHHHHHHHHHHHHhcC--------CCEEEEecChhhCcCCCCccHHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEecC
Confidence            999999999999998865        68999999999988888899999999999999999999998 889999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccC
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  205 (257)
                      +++|++.....      ...... ...+..+|+|+++.+++++..
T Consensus       184 ~~~t~~~~~~~------~~~~~~-~~~~~~~~~~va~~i~~~~~~  221 (263)
T PRK09072        184 ATRTAMNSEAV------QALNRA-LGNAMDDPEDVAAAVLQAIEK  221 (263)
T ss_pred             cccccchhhhc------cccccc-ccCCCCCHHHHHHHHHHHHhC
Confidence            99987532110      111111 112467899999999999975

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.1e-24  Score=179.36  Aligned_cols=201  Identities=19%  Similarity=0.196  Sum_probs=158.0

Q ss_pred             CCcH-HHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            2 GRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~-~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      +|+. +.++.+.+++...+.++.++.+|++|++++..+++++.+.++++|++|||+|.....   .   .+++..+++|+
T Consensus        37 ~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~---~---~~~~~~~~vn~  110 (248)
T PRK07806         37 YRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGGLDALVLNASGGMES---G---MDEDYAMRLNR  110 (248)
T ss_pred             eCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCcEEEECCCCCCCC---C---CCcceeeEeee
Confidence            4554 456777777777677889999999999999999999999999999999999864321   1   12456789999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccc-----cccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEE
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-----TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN  155 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~-----~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~  155 (257)
                      .+++.+++++.++|.+          .++||++||..+.     .+.+.+..|+++|++++.++++++.|+. +.||+++
T Consensus       111 ~~~~~l~~~~~~~~~~----------~~~iv~isS~~~~~~~~~~~~~~~~~Y~~sK~a~e~~~~~l~~~~~-~~~i~v~  179 (248)
T PRK07806        111 DAQRNLARAALPLMPA----------GSRVVFVTSHQAHFIPTVKTMPEYEPVARSKRAGEDALRALRPELA-EKGIGFV  179 (248)
T ss_pred             HHHHHHHHHHHhhccC----------CceEEEEeCchhhcCccccCCccccHHHHHHHHHHHHHHHHHHHhh-ccCeEEE
Confidence            9999999999998854          4789999996543     2334567899999999999999999998 8899999


Q ss_pred             EEecCcccCCCCCCC---CChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          156 GIAPGPIKDTAGVSK---LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       156 ~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      +|.||.+.|++....   ..+...   .....+.+++.+|+|++++++++++  +.+.+|+.+.++||....
T Consensus       180 ~v~pg~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~dva~~~~~l~~--~~~~~g~~~~i~~~~~~~  246 (248)
T PRK07806        180 VVSGDMIEGTVTATLLNRLNPGAI---EARREAAGKLYTVSEFAAEVARAVT--APVPSGHIEYVGGADYFL  246 (248)
T ss_pred             EeCCccccCchhhhhhccCCHHHH---HHHHhhhcccCCHHHHHHHHHHHhh--ccccCccEEEecCcccee
Confidence            999999987753211   111111   1123456789999999999999997  457899999999986543

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.93  E-value=1.1e-24  Score=166.80  Aligned_cols=152  Identities=22%  Similarity=0.180  Sum_probs=139.3

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCC--CCCCHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA--EDLSPNGFRTVIEI   78 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~--~~~~~~~~~~~~~~   78 (257)
                      |||++++|++++++.    ..++...||+.|.++.+++++++.++|+.++++|||||+...-.+  .+...++.+.-+.+
T Consensus        35 ~gR~e~~L~e~~~~~----p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~  110 (245)
T COG3967          35 CGRNEERLAEAKAEN----PEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIAT  110 (245)
T ss_pred             ecCcHHHHHHHHhcC----cchheeeecccchhhHHHHHHHHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHH
Confidence            689999998877664    568899999999999999999999999999999999998765433  35567788899999


Q ss_pred             HhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      |+.+++.+++.++|++.++.        .+.||+|||..+..|....+.|+++|+|+..|+.+|+.+++ ..+|+|..+.
T Consensus       111 Nl~API~Lt~~~lphl~~q~--------~a~IInVSSGLafvPm~~~PvYcaTKAaiHsyt~aLR~Qlk-~t~veVIE~~  181 (245)
T COG3967         111 NLLAPIRLTALLLPHLLRQP--------EATIINVSSGLAFVPMASTPVYCATKAAIHSYTLALREQLK-DTSVEVIELA  181 (245)
T ss_pred             hhhhHHHHHHHHHHHHHhCC--------CceEEEeccccccCcccccccchhhHHHHHHHHHHHHHHhh-hcceEEEEec
Confidence            99999999999999999987        78999999999999999999999999999999999999998 8899999999


Q ss_pred             cCcccCC
Q 025124          159 PGPIKDT  165 (257)
Q Consensus       159 Pg~v~t~  165 (257)
                      |..|+|+
T Consensus       182 PP~V~t~  188 (245)
T COG3967         182 PPLVDTT  188 (245)
T ss_pred             CCceecC
Confidence            9999997

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.93  E-value=8.4e-24  Score=179.91  Aligned_cols=207  Identities=17%  Similarity=0.125  Sum_probs=157.1

Q ss_pred             CCCcHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI   78 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~   78 (257)
                      ++|+.++++++.+++.+.  +.++.++.||++|.++++++++++.+.+++||+||||||+... +..+.+.++|+.++++
T Consensus        44 ~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~iD~li~nAG~~~~-~~~~~t~~~~e~~~~v  122 (313)
T PRK05854         44 PVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGRPIHLLINNAGVMTP-PERQTTADGFELQFGT  122 (313)
T ss_pred             EeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCCCccEEEECCccccC-CccccCcccHHHHhhh
Confidence            378999999998888765  3468899999999999999999999999999999999997543 3446788999999999


Q ss_pred             HhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccc------------cccchhhHHHHHHHHHHHHHHHHHh
Q 025124           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA------------TWYQIHVSAAKAAVDSITRSLALEW  146 (257)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~------------~~~~~~Y~~sK~a~~~l~~~la~e~  146 (257)
                      |+.|++.+++.++|.|.+.         .++||++||..+..+            .++...|+.||+|+.+|++.|+.++
T Consensus       123 N~~g~~~l~~~llp~l~~~---------~~riv~vsS~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~  193 (313)
T PRK05854        123 NHLGHFALTAHLLPLLRAG---------RARVTSQSSIAARRGAINWDDLNWERSYAGMRAYSQSKIAVGLFALELDRRS  193 (313)
T ss_pred             hhHHHHHHHHHHHHHHHhC---------CCCeEEEechhhcCCCcCcccccccccCcchhhhHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999764         478999999876543            2456789999999999999999865


Q ss_pred             c-CCCCeEEEEEecCcccCCCCCCCCC----hHHHHHHhhhhc-cCC-CCCCHHhHHHHHHHhccCCCCcccCcEEEec
Q 025124          147 G-TDYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSKATDYM-AAY-KFGEKWDIAMAALYLASDAGKYVNGNTLIVD  218 (257)
Q Consensus       147 ~-~~~gi~v~~v~Pg~v~t~~~~~~~~----~~~~~~~~~~~~-~~~-~~~~~~dva~~~~~l~~~~~~~~~G~~~~~d  218 (257)
                      . .+.||+|++++||++.|++......    ............ ... .+.++++.+...++++..+.. .+|..+..+
T Consensus       194 ~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~~l~~a~~~~~-~~g~~~~~~  271 (313)
T PRK05854        194 RAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSARGFLVGTVESAILPALYAATSPDA-EGGAFYGPR  271 (313)
T ss_pred             hcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHHhhcccccCCHHHHHHHhhheeeCCCC-CCCcEECCC
Confidence            3 1578999999999999987533211    011111111111 011 235788889999888865432 246555443

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.8e-23  Score=171.96  Aligned_cols=182  Identities=20%  Similarity=0.178  Sum_probs=158.3

Q ss_pred             CCcHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      +|+.++++++.+.+.+.  +.+++++.+|+++.+++.++++++.++++++|++|||+|+.....+.+.+.+.++..+++|
T Consensus        33 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n  112 (248)
T PRK08251         33 ARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETN  112 (248)
T ss_pred             eCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHH
Confidence            68888888888877754  5678999999999999999999999999999999999998877777888899999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccccccc-chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~-~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      +.+++.+++.+++.|.+.+        .++||++||..+..+.+. ...|+.+|++++++++.++.++. ..||++++|+
T Consensus       113 ~~~~~~~~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~  183 (248)
T PRK08251        113 FVAALAQCEAAMEIFREQG--------SGHLVLISSVSAVRGLPGVKAAYAASKAGVASLGEGLRAELA-KTPIKVSTIE  183 (248)
T ss_pred             hHHHHHHHHHHHHHHHhcC--------CCeEEEEeccccccCCCCCcccHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEe
Confidence            9999999999999998865        688999999988877774 68899999999999999999998 8899999999


Q ss_pred             cCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccC
Q 025124          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (257)
Q Consensus       159 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  205 (257)
                      ||+++|++.....             ......++++.++.++..+..
T Consensus       184 pg~v~t~~~~~~~-------------~~~~~~~~~~~a~~i~~~~~~  217 (248)
T PRK08251        184 PGYIRSEMNAKAK-------------STPFMVDTETGVKALVKAIEK  217 (248)
T ss_pred             cCcCcchhhhccc-------------cCCccCCHHHHHHHHHHHHhc
Confidence            9999987543211             011357899999999998864

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.92  E-value=4.9e-23  Score=172.21  Aligned_cols=205  Identities=22%  Similarity=0.280  Sum_probs=162.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+++.++++.+.+   +.++.++.+|++|.++++.+++++.+.++++|+||||+|.....+..+.+.++++..+++|+.
T Consensus        33 ~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~  109 (276)
T PRK06482         33 VRRPDALDDLKARY---GDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLI  109 (276)
T ss_pred             eCCHHHHHHHHHhc---cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhH
Confidence            56766666554432   357889999999999999999999999999999999999887777888899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.++++++|+|+++.        .++||++||..+..+.++.+.|+++|++++.|+++++.++. ++||+++.++||.
T Consensus       110 g~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~-~~gi~v~~v~pg~  180 (276)
T PRK06482        110 GSIQVIRAALPHLRRQG--------GGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVEAVAQEVA-PFGIEFTIVEPGP  180 (276)
T ss_pred             HHHHHHHHHHHHHHhcC--------CCEEEEEcCcccccCCCCCchhHHHHHHHHHHHHHHHHHhh-ccCcEEEEEeCCc
Confidence            99999999999998765        68999999998888888899999999999999999999998 8899999999999


Q ss_pred             ccCCCCCCCCC-------hH----HHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          162 IKDTAGVSKLA-------PE----EIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       162 v~t~~~~~~~~-------~~----~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      +.|++......       ..    ........ .+..-..++++++++++..+...   ..+..+++.+|..
T Consensus       181 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~a~~~~~~~~---~~~~~~~~g~~~~  248 (276)
T PRK06482        181 ARTNFGAGLDRGAPLDAYDDTPVGDLRRALAD-GSFAIPGDPQKMVQAMIASADQT---PAPRRLTLGSDAY  248 (276)
T ss_pred             cccCCcccccccCCCccccchhhHHHHHHHhh-ccCCCCCCHHHHHHHHHHHHcCC---CCCeEEecChHHH
Confidence            98876432110       01    11111111 11222468999999999998643   2245577766643

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.92  E-value=3.3e-23  Score=170.74  Aligned_cols=188  Identities=33%  Similarity=0.459  Sum_probs=156.9

Q ss_pred             CeEEEEccCCC-HHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Q 025124           21 PAIGLEGDVRK-REDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (257)
Q Consensus        21 ~~~~~~~Dls~-~~~~~~~~~~~~~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (257)
                      .+.++.+|+++ .++++.+++++.+.+|++|++|||||.... .++.+.+.++|+..+++|+.+++.+++.+.|.+.+  
T Consensus        58 ~~~~~~~Dvs~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~--  135 (251)
T COG1028          58 RAAAVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKK--  135 (251)
T ss_pred             cEEEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhh--
Confidence            67888999998 999999999999999999999999998877 48899999999999999999999999988888873  


Q ss_pred             CCCCCCCCCceEEEEccccccccccc-chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHH-
Q 025124           99 RGQASSSSGGIIINISATLHYTATWY-QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI-  176 (257)
Q Consensus        99 ~~~~~~~~~g~ii~iss~~~~~~~~~-~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~-  176 (257)
                              . +||++||..+. +.++ ++.|++||+|+++|+++++.|+. ++||++++|+||++.|++.......... 
T Consensus       136 --------~-~Iv~isS~~~~-~~~~~~~~Y~~sK~al~~~~~~l~~e~~-~~gi~v~~v~PG~~~t~~~~~~~~~~~~~  204 (251)
T COG1028         136 --------Q-RIVNISSVAGL-GGPPGQAAYAASKAALIGLTKALALELA-PRGIRVNAVAPGYIDTPMTAALESAELEA  204 (251)
T ss_pred             --------C-eEEEECCchhc-CCCCCcchHHHHHHHHHHHHHHHHHHHh-hhCcEEEEEEeccCCCcchhhhhhhhhhH
Confidence                    4 79999999998 7777 49999999999999999999998 8899999999999998876543221100 


Q ss_pred             HHHhhhhccCCCCCCHHhHHHHHHHhccCC-CCcccCcEEEecCCc
Q 025124          177 RSKATDYMAAYKFGEKWDIAMAALYLASDA-GKYVNGNTLIVDGGN  221 (257)
Q Consensus       177 ~~~~~~~~~~~~~~~~~dva~~~~~l~~~~-~~~~~G~~~~~dgg~  221 (257)
                      ........+..++..|++++..+.++.+.. ..+++|..+.++||.
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  250 (251)
T COG1028         205 LKRLAARIPLGRLGTPEEVAAAVAFLASDEAASYITGQTLPVDGGL  250 (251)
T ss_pred             HHHHHhcCCCCCCcCHHHHHHHHHHHcCcchhccccCCEEEeCCCC
Confidence            111111114447788999999999888664 567889998888875

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.4e-23  Score=178.13  Aligned_cols=206  Identities=17%  Similarity=0.115  Sum_probs=156.8

Q ss_pred             CCCcHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI   78 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~   78 (257)
                      ++|+.+++++..+++.+.  +.++.++.+|++|.++++++++++.++++++|++|||||.....  .+.+.++++..+++
T Consensus        46 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~--~~~~~~~~~~~~~v  123 (306)
T PRK06197         46 AVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYPRIDLLINNAGVMYTP--KQTTADGFELQFGT  123 (306)
T ss_pred             EeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCCCCCEEEECCccccCC--CccCCCCcchhhhh
Confidence            368888888877777654  45788999999999999999999999999999999999975432  35677889999999


Q ss_pred             HhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccc-------------ccccchhhHHHHHHHHHHHHHHHHH
Q 025124           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-------------ATWYQIHVSAAKAAVDSITRSLALE  145 (257)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~-------------~~~~~~~Y~~sK~a~~~l~~~la~e  145 (257)
                      |+.|++.+++.+++.|++.+        .++||++||.++..             +.++...|++||+++++|++.++.+
T Consensus       124 N~~g~~~l~~~ll~~l~~~~--------~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~  195 (306)
T PRK06197        124 NHLGHFALTGLLLDRLLPVP--------GSRVVTVSSGGHRIRAAIHFDDLQWERRYNRVAAYGQSKLANLLFTYELQRR  195 (306)
T ss_pred             hhHHHHHHHHHHHHHHhhCC--------CCEEEEECCHHHhccCCCCccccCcccCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999998865        68999999986543             2345678999999999999999999


Q ss_pred             hcCCCCeEEEEE--ecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          146 WGTDYAIRVNGI--APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       146 ~~~~~gi~v~~v--~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                      +. +.|++++++  +||++.|++.....  ......+....+. ...++++-+..+++++.+ ....+|..+..+|+.
T Consensus       196 l~-~~~i~v~~v~~~PG~v~T~~~~~~~--~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~-~~~~~g~~~~~~~~~  268 (306)
T PRK06197        196 LA-AAGATTIAVAAHPGVSNTELARNLP--RALRPVATVLAPL-LAQSPEMGALPTLRAATD-PAVRGGQYYGPDGFG  268 (306)
T ss_pred             hh-cCCCCeEEEEeCCCcccCcccccCc--HHHHHHHHHHHhh-hcCCHHHHHHHHHHHhcC-CCcCCCeEEccCccc
Confidence            98 778777655  79999998754321  1111111111111 124667777777777654 345678888777654

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.92  E-value=3.5e-23  Score=172.93  Aligned_cols=188  Identities=19%  Similarity=0.235  Sum_probs=151.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++.+.    ..  .+.++.+|+++.++++++++++.+.++++|++|||+|.....++.+.+.++++..+++|+.
T Consensus        32 ~r~~~~~~~~~----~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~  105 (274)
T PRK05693         32 ARKAEDVEALA----AA--GFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVF  105 (274)
T ss_pred             eCCHHHHHHHH----HC--CCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhH
Confidence            46665554432    22  3678899999999999999999999999999999999877778888999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.++++++|.|.+.         .|+||++||..+..+.+..+.|+++|++++.|+++++.|+. ++||+|++|+||+
T Consensus       106 g~~~l~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~l~~e~~-~~gi~v~~v~pg~  175 (274)
T PRK05693        106 AVVGVTRALFPLLRRS---------RGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLELA-PFGVQVMEVQPGA  175 (274)
T ss_pred             HHHHHHHHHHHHHhhc---------CCEEEEECCccccCCCCCccHHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEecCc
Confidence            9999999999999764         58899999999988888899999999999999999999998 8999999999999


Q ss_pred             ccCCCCCCCCChH-----------HHHHHhhh--hccCCCCCCHHhHHHHHHHhccC
Q 025124          162 IKDTAGVSKLAPE-----------EIRSKATD--YMAAYKFGEKWDIAMAALYLASD  205 (257)
Q Consensus       162 v~t~~~~~~~~~~-----------~~~~~~~~--~~~~~~~~~~~dva~~~~~l~~~  205 (257)
                      ++|++........           ...+.+..  ........+|+++++.++..+..
T Consensus       176 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~  232 (274)
T PRK05693        176 IASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQLLAAVQQ  232 (274)
T ss_pred             cccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHhC
Confidence            9998754321100           00011101  01112346899999999998864

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.9e-23  Score=194.52  Aligned_cols=185  Identities=17%  Similarity=0.125  Sum_probs=159.4

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCC--CHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL--SPNGFRTVIEI   78 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~--~~~~~~~~~~~   78 (257)
                      ++|++++++++.+++.+.+.++.++.+|++|.++++++++++.+++|++|++|||||......+.+.  +.++++..+++
T Consensus       401 ~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~  480 (657)
T PRK07201        401 VARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAV  480 (657)
T ss_pred             EECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHH
Confidence            3688899999999988777889999999999999999999999999999999999997654444332  25789999999


Q ss_pred             HhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      |+.+++.+++.++|.|.+++        .|+||++||.++..+.++.+.|+++|+++++|+++++.|+. +.||++++|+
T Consensus       481 N~~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~v~  551 (657)
T PRK07201        481 NYFGAVRLILGLLPHMRERR--------FGHVVNVSSIGVQTNAPRFSAYVASKAALDAFSDVAASETL-SDGITFTTIH  551 (657)
T ss_pred             HHHHHHHHHHHHHHhhhhcC--------CCEEEEECChhhcCCCCCcchHHHHHHHHHHHHHHHHHHHH-hhCCcEEEEE
Confidence            99999999999999998876        68999999999988888899999999999999999999998 8899999999


Q ss_pred             cCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccC
Q 025124          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (257)
Q Consensus       159 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  205 (257)
                      ||+++|++......           .......+|+++|+.++..+..
T Consensus       552 pg~v~T~~~~~~~~-----------~~~~~~~~~~~~a~~i~~~~~~  587 (657)
T PRK07201        552 MPLVRTPMIAPTKR-----------YNNVPTISPEEAADMVVRAIVE  587 (657)
T ss_pred             CCcCcccccCcccc-----------ccCCCCCCHHHHHHHHHHHHHh
Confidence            99999987532110           0112357899999999998754

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=8e-23  Score=167.10  Aligned_cols=200  Identities=26%  Similarity=0.302  Sum_probs=163.3

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.+.+... .+++++.+|+++.++++++++++...++++|.+|+++|.....++.+  .++++..+++|+.
T Consensus        36 ~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~--~~~~~~~~~~n~~  112 (238)
T PRK05786         36 SRNENKLKRMKKTLSKY-GNIHYVVGDVSSTESARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEE--FSGLEEMLTNHIK  112 (238)
T ss_pred             eCCHHHHHHHHHHHHhc-CCeEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEEcCCCcCCCchHH--HHHHHHHHHHhch
Confidence            57778887776666653 36889999999999999999999988999999999999755444433  4889999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccc-cccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~-~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      +++.+.+.++|.+.+          .+++|++||..+. .+.+....|+++|++++.++++++.++. +.||+++.|+||
T Consensus       113 ~~~~~~~~~~~~~~~----------~~~iv~~ss~~~~~~~~~~~~~Y~~sK~~~~~~~~~~~~~~~-~~gi~v~~i~pg  181 (238)
T PRK05786        113 IPLYAVNASLRFLKE----------GSSIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEILASELL-GRGIRVNGIAPT  181 (238)
T ss_pred             HHHHHHHHHHHHHhc----------CCEEEEEecchhcccCCCCchHHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecC
Confidence            999999999999864          5789999998764 3556778899999999999999999998 889999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhcc-CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMA-AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +++|++..     .....   ...+ .....+++++++.+.+++++...+++|..+.++||..+
T Consensus       182 ~v~~~~~~-----~~~~~---~~~~~~~~~~~~~~va~~~~~~~~~~~~~~~g~~~~~~~~~~~  237 (238)
T PRK05786        182 TISGDFEP-----ERNWK---KLRKLGDDMAPPEDFAKVIIWLLTDEADWVDGVVIPVDGGARL  237 (238)
T ss_pred             ccCCCCCc-----hhhhh---hhccccCCCCCHHHHHHHHHHHhcccccCccCCEEEECCcccc
Confidence            99987531     11111   1111 12357899999999999998888899999999998654

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.92  E-value=4.2e-23  Score=173.49  Aligned_cols=223  Identities=17%  Similarity=0.122  Sum_probs=167.0

Q ss_pred             CCCcHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI   78 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~   78 (257)
                      .+|+.++.+++++.+.+.  ..++.+++||+++.++++.+++++.+.++++|++|||||+.....  ..+.|.+|.++.+
T Consensus        65 ~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~~ldvLInNAGV~~~~~--~~t~DG~E~~~~t  142 (314)
T KOG1208|consen   65 ACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEGPLDVLINNAGVMAPPF--SLTKDGLELTFAT  142 (314)
T ss_pred             EeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCCCccEEEeCcccccCCc--ccCccchhheehh
Confidence            379999999999999874  457888999999999999999999999999999999999876654  6788999999999


Q ss_pred             HhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccc--------c-----cccchhhHHHHHHHHHHHHHHHHH
Q 025124           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT--------A-----TWYQIHVSAAKAAVDSITRSLALE  145 (257)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~--------~-----~~~~~~Y~~sK~a~~~l~~~la~e  145 (257)
                      |+.|+|.+++.++|.|+...        .+|||++||.....        +     ......|+.||.+...+++.|+++
T Consensus       143 N~lg~flLt~lLlp~lk~s~--------~~RIV~vsS~~~~~~~~~~~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~  214 (314)
T KOG1208|consen  143 NYLGHFLLTELLLPLLKRSA--------PSRIVNVSSILGGGKIDLKDLSGEKAKLYSSDAAYALSKLANVLLANELAKR  214 (314)
T ss_pred             hhHHHHHHHHHHHHHHhhCC--------CCCEEEEcCccccCccchhhccchhccCccchhHHHHhHHHHHHHHHHHHHH
Confidence            99999999999999999876        58999999977511        0     122235999999999999999999


Q ss_pred             hcCCCCeEEEEEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCC-CCcccCcEEEecCCcccC
Q 025124          146 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA-GKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       146 ~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~-~~~~~G~~~~~dgg~~~~  224 (257)
                      +. + ||.++.++||.+.|+...+  . ......+........+-+++.-|++.++++..+ -...+|.. .-|+...-.
T Consensus       215 l~-~-~V~~~~~hPG~v~t~~l~r--~-~~~~~~l~~~l~~~~~ks~~~ga~t~~~~a~~p~~~~~sg~y-~~d~~~~~~  288 (314)
T KOG1208|consen  215 LK-K-GVTTYSVHPGVVKTTGLSR--V-NLLLRLLAKKLSWPLTKSPEQGAATTCYAALSPELEGVSGKY-FEDCAIAEP  288 (314)
T ss_pred             hh-c-CceEEEECCCcccccceec--c-hHHHHHHHHHHHHHhccCHHHHhhheehhccCccccCccccc-ccccccccc
Confidence            97 6 9999999999999985544  1 111111222212112247899999999988754 23355655 333333333


Q ss_pred             CCCCCcHHHHHHHHH
Q 025124          225 NPRDLPKEAVNQLSR  239 (257)
Q Consensus       225 ~~~~~~~~~~~~~~~  239 (257)
                      ......+.....+-+
T Consensus       289 ~~~a~d~~~~~~lw~  303 (314)
T KOG1208|consen  289 SEEALDEELAEKLWK  303 (314)
T ss_pred             ccccCCHHHHHHHHH
Confidence            334444444444433

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.92  E-value=5.9e-23  Score=168.54  Aligned_cols=182  Identities=14%  Similarity=0.082  Sum_probs=156.1

Q ss_pred             CCCcHHHHHHHHHHHHhc-CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      ++|++++++.+.+++... +.+++++++|++++++++++++++.+   ++|++|||+|......+.+.+.+++.+.+++|
T Consensus        31 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n  107 (243)
T PRK07102         31 AARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA---LPDIVLIAVGTLGDQAACEADPALALREFRTN  107 (243)
T ss_pred             EeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh---cCCEEEECCcCCCCcccccCCHHHHHHHHHhh
Confidence            368888888887777654 45789999999999999999998765   57999999998777777888999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.+++.+++++.++|.+++        .++|+++||..+..+.++...|+++|+++++|+++++.|+. +.||++++|+|
T Consensus       108 ~~~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~el~-~~gi~v~~v~p  178 (243)
T PRK07102        108 FEGPIALLTLLANRFEARG--------SGTIVGISSVAGDRGRASNYVYGSAKAALTAFLSGLRNRLF-KSGVHVLTVKP  178 (243)
T ss_pred             hHHHHHHHHHHHHHHHhCC--------CCEEEEEecccccCCCCCCcccHHHHHHHHHHHHHHHHHhh-ccCcEEEEEec
Confidence            9999999999999999876        68999999998888888889999999999999999999998 89999999999


Q ss_pred             CcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCC
Q 025124          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (257)
Q Consensus       160 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  206 (257)
                      |+++|++....            ..+.....+|+++++.+..+++..
T Consensus       179 g~v~t~~~~~~------------~~~~~~~~~~~~~a~~i~~~~~~~  213 (243)
T PRK07102        179 GFVRTPMTAGL------------KLPGPLTAQPEEVAKDIFRAIEKG  213 (243)
T ss_pred             CcccChhhhcc------------CCCccccCCHHHHHHHHHHHHhCC
Confidence            99998753211            012234578999999999999753

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.92  E-value=1e-22  Score=174.07  Aligned_cols=209  Identities=14%  Similarity=0.061  Sum_probs=154.5

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n   79 (257)
                      ++|+.++++++.+++...+.++.++.+|+++.++++++++++.+.++++|+||||||+... ....+.+.++|+.++++|
T Consensus        36 ~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN  115 (322)
T PRK07453         36 ACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATN  115 (322)
T ss_pred             EECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHH
Confidence            3688888888888886555678999999999999999999988877899999999997543 234567899999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccc-----------------------------------cccc
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-----------------------------------ATWY  124 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~-----------------------------------~~~~  124 (257)
                      +.|++.+++.++|.|++++.      ..++||++||.....                                   +..+
T Consensus       116 ~~g~~~l~~~~~~~~~~~~~------~~~riV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (322)
T PRK07453        116 HLGHFLLCNLLLEDLKKSPA------PDPRLVILGTVTANPKELGGKIPIPAPADLGDLSGFEAGFKAPISMADGKKFKP  189 (322)
T ss_pred             HHHHHHHHHHHHHHHHhCCC------CCceEEEEcccccCccccCCccCCCCccchhhhhcchhcccccccccCccCCCc
Confidence            99999999999999987641      025899999965421                                   0123


Q ss_pred             chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccc-CCCCCCCCCh-HHHHHHhhhhccCCCCCCHHhHHHHHHHh
Q 025124          125 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK-DTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIAMAALYL  202 (257)
Q Consensus       125 ~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~-t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l  202 (257)
                      ...|+.||.+...+++.+++++....||++++++||++. |++....... ......+. ........+++..++.++++
T Consensus       190 ~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  268 (322)
T PRK07453        190 GKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRNTPPLFQKLFPWFQ-KNITGGYVSQELAGERVAQV  268 (322)
T ss_pred             cchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcccccCCHHHHHHHHHHH-HHHhhceecHHHHhhHHHHh
Confidence            467999999999999999999852469999999999995 6654322110 11111111 11112346778888888888


Q ss_pred             ccCCCCcccCcEEE
Q 025124          203 ASDAGKYVNGNTLI  216 (257)
Q Consensus       203 ~~~~~~~~~G~~~~  216 (257)
                      +.+.....+|..+.
T Consensus       269 ~~~~~~~~~G~y~~  282 (322)
T PRK07453        269 VADPEFAQSGVHWS  282 (322)
T ss_pred             hcCcccCCCCceee
Confidence            76554445676665

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2.7e-22  Score=163.88  Aligned_cols=190  Identities=28%  Similarity=0.383  Sum_probs=160.7

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|++++++++.+++.+. .+++++.+|+++.++++.+++++.+.++++|++||++|.....++.+.+.++++..+++|+
T Consensus        36 ~~r~~~~~~~~~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~  114 (237)
T PRK07326         36 TARDQKELEEAAAELNNK-GNVLGLAADVRDEADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNL  114 (237)
T ss_pred             eeCCHHHHHHHHHHHhcc-CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhcc
Confidence            368888888888887654 6789999999999999999999999999999999999987777788899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .+++.+++++++.|.+ .        .++||++||..+..+..+...|+++|+++.++++.++.++. ..|++++.|+||
T Consensus       115 ~~~~~~~~~~~~~~~~-~--------~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~~~~~~~~~~~~-~~gi~v~~v~pg  184 (237)
T PRK07326        115 TGAFYTIKAAVPALKR-G--------GGYIINISSLAGTNFFAGGAAYNASKFGLVGFSEAAMLDLR-QYGIKVSTIMPG  184 (237)
T ss_pred             HHHHHHHHHHHHHHHH-C--------CeEEEEECChhhccCCCCCchHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEeec
Confidence            9999999999999843 3        57899999998888888888999999999999999999998 889999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccC
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNG  212 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  212 (257)
                      ++.|++...... ..          .....+++|+++.+++++..+...+.+
T Consensus       185 ~~~t~~~~~~~~-~~----------~~~~~~~~d~a~~~~~~l~~~~~~~~~  225 (237)
T PRK07326        185 SVATHFNGHTPS-EK----------DAWKIQPEDIAQLVLDLLKMPPRTLPS  225 (237)
T ss_pred             cccCcccccccc-hh----------hhccCCHHHHHHHHHHHHhCCcccccc
Confidence            998875422111 00          011368999999999999876554443

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.91  E-value=1.2e-23  Score=163.64  Aligned_cols=187  Identities=17%  Similarity=0.120  Sum_probs=158.4

Q ss_pred             eEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCC--CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Q 025124           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPA--EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (257)
Q Consensus        22 ~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~-~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (257)
                      ......|++...-+.++++..++.++..|++|||||...+ ...  ...+.++|++.++.|+++++-+.+.++|.++++.
T Consensus        56 ~v~~~g~~~e~~~l~al~e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p  135 (253)
T KOG1204|consen   56 FVHVVGDITEEQLLGALREAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSP  135 (253)
T ss_pred             cceechHHHHHHHHHHHHhhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCC
Confidence            3445678888888899999999999999999999996654 333  4788999999999999999999999999999873


Q ss_pred             CCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCC----ChH
Q 025124           99 RGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL----APE  174 (257)
Q Consensus        99 ~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~----~~~  174 (257)
                      .       .+.++|+||.++..|..+|+.||.+|+|.++|++.++.|-  +.+|++.++.||.++|+|.....    ...
T Consensus       136 ~-------~~~vVnvSS~aav~p~~~wa~yc~~KaAr~m~f~~lA~EE--p~~v~vl~~aPGvvDT~mq~~ir~~~~~~p  206 (253)
T KOG1204|consen  136 V-------NGNVVNVSSLAAVRPFSSWAAYCSSKAARNMYFMVLASEE--PFDVRVLNYAPGVVDTQMQVCIRETSRMTP  206 (253)
T ss_pred             c-------cCeEEEecchhhhccccHHHHhhhhHHHHHHHHHHHhhcC--ccceeEEEccCCcccchhHHHHhhccCCCH
Confidence            2       5889999999999999999999999999999999999983  47999999999999999975432    345


Q ss_pred             HHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEec
Q 025124          175 EIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVD  218 (257)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~d  218 (257)
                      .....+.+....+++.+|...++.+..|+.... +.+|+.+.+.
T Consensus       207 ~~l~~f~el~~~~~ll~~~~~a~~l~~L~e~~~-f~sG~~vdy~  249 (253)
T KOG1204|consen  207 ADLKMFKELKESGQLLDPQVTAKVLAKLLEKGD-FVSGQHVDYY  249 (253)
T ss_pred             HHHHHHHHHHhcCCcCChhhHHHHHHHHHHhcC-cccccccccc
Confidence            556666666677889999999999999996543 8899887654

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.91  E-value=4e-23  Score=168.23  Aligned_cols=194  Identities=21%  Similarity=0.149  Sum_probs=166.0

Q ss_pred             CCCcHHHHHHHHHHHHhc-CC-CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSL-GI-PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI   78 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~-~~-~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~   78 (257)
                      ++|+.+++++++++++-. +. .+.+..+|++|.+++...++++++.++.+|.+|+|||...++.+.+.+.++++..+++
T Consensus        63 ~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~v  142 (331)
T KOG1210|consen   63 TARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDV  142 (331)
T ss_pred             EeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCcceEEEecCcccccccccCCHHHHHHHHHh
Confidence            468999999999999855 22 3779999999999999999999999999999999999999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      |+.|.++.+++.++.|++...       .|+|+++||..+..+..+++.|+++|+|+.+|+.++++|+. ++||+|....
T Consensus       143 Nylgt~~v~~~~~~~mk~~~~-------~g~I~~vsS~~a~~~i~GysaYs~sK~alrgLa~~l~qE~i-~~~v~Vt~~~  214 (331)
T KOG1210|consen  143 NYLGTVNVAKAAARAMKKREH-------LGRIILVSSQLAMLGIYGYSAYSPSKFALRGLAEALRQELI-KYGVHVTLYY  214 (331)
T ss_pred             hhhhhHHHHHHHHHHhhcccc-------CcEEEEehhhhhhcCcccccccccHHHHHHHHHHHHHHHHh-hcceEEEEEc
Confidence            999999999999999998641       46999999999999999999999999999999999999999 8999999999


Q ss_pred             cCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhcc
Q 025124          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  204 (257)
Q Consensus       159 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  204 (257)
                      |+.+.||..................  .....++|++|.+++.-+.
T Consensus       215 P~~~~tpGfE~En~tkP~~t~ii~g--~ss~~~~e~~a~~~~~~~~  258 (331)
T KOG1210|consen  215 PPDTLTPGFERENKTKPEETKIIEG--GSSVIKCEEMAKAIVKGMK  258 (331)
T ss_pred             CCCCCCCccccccccCchheeeecC--CCCCcCHHHHHHHHHhHHh
Confidence            9999999765544322222222221  2234788999988776664

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.91  E-value=5.6e-24  Score=163.74  Aligned_cols=140  Identities=26%  Similarity=0.332  Sum_probs=130.7

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHH-HhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTIN-HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~-~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      ++..+.+|+++++++..+..++++ .+|++|+++||||.....+..|.+.+..++++++|++|.+.+++++...+.+.  
T Consensus        53 gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lika--  130 (289)
T KOG1209|consen   53 GLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKA--  130 (289)
T ss_pred             CCeeEEeccCChHHHHHHHHHHhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHc--
Confidence            478899999999999999999999 78999999999999888999999999999999999999999999999555554  


Q ss_pred             CCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCC
Q 025124          100 GQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK  170 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~  170 (257)
                             +|.|||++|..++.|.++.+.|.+||+|+.+|++.|+.|+. +.||+|..+.||.+.|......
T Consensus       131 -------KGtIVnvgSl~~~vpfpf~~iYsAsKAAihay~~tLrlEl~-PFgv~Vin~itGGv~T~Ia~k~  193 (289)
T KOG1209|consen  131 -------KGTIVNVGSLAGVVPFPFGSIYSASKAAIHAYARTLRLELK-PFGVRVINAITGGVATDIADKR  193 (289)
T ss_pred             -------cceEEEecceeEEeccchhhhhhHHHHHHHHhhhhcEEeee-ccccEEEEecccceecccccCC
Confidence                   69999999999999999999999999999999999999999 9999999999999999876553

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.91  E-value=3.4e-23  Score=168.97  Aligned_cols=140  Identities=28%  Similarity=0.321  Sum_probs=130.5

Q ss_pred             CCCeEEEEccCCCHHHHHHHHHHHHHHhC--CccEEEeCCCCC-CCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 025124           19 GIPAIGLEGDVRKREDAVRVVESTINHFG--KLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLK   95 (257)
Q Consensus        19 ~~~~~~~~~Dls~~~~~~~~~~~~~~~~g--~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~   95 (257)
                      ..+...++.||+++++++++.+.+.+..+  ++=++|||||+. ..++.+-.+.+++++++++|+.|++-++++++|+++
T Consensus        75 s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr  154 (322)
T KOG1610|consen   75 SPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLR  154 (322)
T ss_pred             CCcceeEeeccCCHHHHHHHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHH
Confidence            57889999999999999999999999765  688999999965 457888889999999999999999999999999999


Q ss_pred             hcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCC
Q 025124           96 KGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  168 (257)
Q Consensus        96 ~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~  168 (257)
                      +.         +||||++||..+..+.|..+.|++||+|++.|+.++++|+. ++||+|..|.||.+.|++..
T Consensus       155 ~a---------rGRvVnvsS~~GR~~~p~~g~Y~~SK~aVeaf~D~lR~EL~-~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  155 RA---------RGRVVNVSSVLGRVALPALGPYCVSKFAVEAFSDSLRRELR-PFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             hc---------cCeEEEecccccCccCcccccchhhHHHHHHHHHHHHHHHH-hcCcEEEEeccCccccccCC
Confidence            87         69999999999999999999999999999999999999999 99999999999999998765

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.91  E-value=8.6e-23  Score=167.57  Aligned_cols=178  Identities=20%  Similarity=0.204  Sum_probs=145.4

Q ss_pred             CCCeEEEEccCCCHHHHHHHHHH-HHHHh---CCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHH
Q 025124           19 GIPAIGLEGDVRKREDAVRVVES-TINHF---GKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY   93 (257)
Q Consensus        19 ~~~~~~~~~Dls~~~~~~~~~~~-~~~~~---g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   93 (257)
                      +.++.++.+|+++.++++.++++ +.+.+   +++|++|||+|.... .++.+.+.++|+..+++|+.+++.+++.+++.
T Consensus        44 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  123 (243)
T PRK07023         44 GERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQA  123 (243)
T ss_pred             CCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHH
Confidence            55788999999999999998877 55555   379999999997554 67778899999999999999999999999999


Q ss_pred             HHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCC--
Q 025124           94 LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--  171 (257)
Q Consensus        94 ~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~--  171 (257)
                      |.++.        .++||++||..+..+.+++..|+++|+++++|++.++.+ . +.||+++.|+||+++|++.....  
T Consensus       124 ~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~-~-~~~i~v~~v~pg~~~t~~~~~~~~~  193 (243)
T PRK07023        124 ASDAA--------ERRILHISSGAARNAYAGWSVYCATKAALDHHARAVALD-A-NRALRIVSLAPGVVDTGMQATIRAT  193 (243)
T ss_pred             hhccC--------CCEEEEEeChhhcCCCCCchHHHHHHHHHHHHHHHHHhc-C-CCCcEEEEecCCccccHHHHHHHhc
Confidence            98765        689999999999999999999999999999999999999 6 88999999999999998642110  


Q ss_pred             Ch--HHHHHHhhhhccCCCCCCHHhHHH-HHHHhccCC
Q 025124          172 AP--EEIRSKATDYMAAYKFGEKWDIAM-AALYLASDA  206 (257)
Q Consensus       172 ~~--~~~~~~~~~~~~~~~~~~~~dva~-~~~~l~~~~  206 (257)
                      ..  ......+....+.++..+|+|+|. .+.+|.++.
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~~  231 (243)
T PRK07023        194 DEERFPMRERFRELKASGALSTPEDAARRLIAYLLSDD  231 (243)
T ss_pred             ccccchHHHHHHHhhhcCCCCCHHHHHHHHHHHHhccc
Confidence            00  011222344455678899999999 556666553

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.90  E-value=6.4e-22  Score=162.18  Aligned_cols=174  Identities=15%  Similarity=0.066  Sum_probs=143.7

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|++++++++.+    .+.++.++.||++|.++++++++++..   .+|.+|||+|........+.+.++|++++++|+.
T Consensus        32 ~r~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~---~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~  104 (240)
T PRK06101         32 GRNQSVLDELHT----QSANIFTLAFDVTDHPGTKAALSQLPF---IPELWIFNAGDCEYMDDGKVDATLMARVFNVNVL  104 (240)
T ss_pred             ECCHHHHHHHHH----hcCCCeEEEeeCCCHHHHHHHHHhccc---CCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHH
Confidence            677777665543    235688999999999999999887643   5799999999654444556789999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      ++++++++++|.|.+          .++|+++||..+..+.++...|+++|+++++|+++++.|+. ++||++++|+||+
T Consensus       105 ~~~~l~~~~~~~~~~----------~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~-~~gi~v~~v~pg~  173 (240)
T PRK06101        105 GVANCIEGIQPHLSC----------GHRVVIVGSIASELALPRAEAYGASKAAVAYFARTLQLDLR-PKGIEVVTVFPGF  173 (240)
T ss_pred             HHHHHHHHHHHhhhc----------CCeEEEEechhhccCCCCCchhhHHHHHHHHHHHHHHHHHH-hcCceEEEEeCCc
Confidence            999999999999864          46799999999999988999999999999999999999998 8899999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccC
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  205 (257)
                      +.|++......            ......+|+++++.+...+..
T Consensus       174 i~t~~~~~~~~------------~~~~~~~~~~~a~~i~~~i~~  205 (240)
T PRK06101        174 VATPLTDKNTF------------AMPMIITVEQASQEIRAQLAR  205 (240)
T ss_pred             CCCCCcCCCCC------------CCCcccCHHHHHHHHHHHHhc
Confidence            99986532110            111246899999999988865

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.90  E-value=1.6e-22  Score=156.41  Aligned_cols=133  Identities=30%  Similarity=0.375  Sum_probs=125.7

Q ss_pred             CCc--HHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            2 GRR--KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         2 ~r~--~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      +|+  .+.++++.+++...+.+++++++|+++.++++++++++.++++++|++|||+|.....++.+.+.++|++++++|
T Consensus        32 ~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n  111 (167)
T PF00106_consen   32 SRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVN  111 (167)
T ss_dssp             ESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHH
T ss_pred             eecccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhccccc
Confidence            566  788999999999888899999999999999999999999999999999999998888999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHh
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW  146 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~  146 (257)
                      +.+++.+.++++|    ++        .|+||++||..+..|.++++.|+++|+|+++|++++++|+
T Consensus       112 ~~~~~~~~~~~~~----~~--------~g~iv~~sS~~~~~~~~~~~~Y~askaal~~~~~~la~e~  166 (167)
T PF00106_consen  112 LFGPFLLAKALLP----QG--------GGKIVNISSIAGVRGSPGMSAYSASKAALRGLTQSLAAEL  166 (167)
T ss_dssp             THHHHHHHHHHHH----HT--------TEEEEEEEEGGGTSSSTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cceeeeeeehhee----cc--------ccceEEecchhhccCCCCChhHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999    33        6999999999999999999999999999999999999986

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.88  E-value=6e-21  Score=157.75  Aligned_cols=188  Identities=14%  Similarity=0.139  Sum_probs=150.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.+.++++.+.....+.++.++.+|++|++++..+++      +++|++|||||.....++.+.+.++++..+++|+.
T Consensus        33 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~  106 (257)
T PRK09291         33 VQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE------WDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVF  106 (257)
T ss_pred             eCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc------CCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhH
Confidence            577777777777777667788999999999998877653      48999999999887788889999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.+++.+++.+.+.+        .++||++||..+..+.++...|+++|++++.++++++.++. +.||+++.|+||+
T Consensus       107 ~~~~~~~~~~~~~~~~~--------~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~-~~gi~~~~v~pg~  177 (257)
T PRK09291        107 GPLELTQGFVRKMVARG--------KGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMHAELK-PFGIQVATVNPGP  177 (257)
T ss_pred             HHHHHHHHHHHHHHhcC--------CceEEEEcChhhccCCCCcchhHHHHHHHHHHHHHHHHHHH-hcCcEEEEEecCc
Confidence            99999999999998866        68999999998888888889999999999999999999998 8899999999999


Q ss_pred             ccCCCCCCCCCh-------H-HHHHHhhhhccCCCCCCHHhHHHHHHHhccC
Q 025124          162 IKDTAGVSKLAP-------E-EIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (257)
Q Consensus       162 v~t~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  205 (257)
                      +.|++.......       . ..........+ ....++++++..+..++..
T Consensus       178 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~  228 (257)
T PRK09291        178 YLTGFNDTMAETPKRWYDPARNFTDPEDLAFP-LEQFDPQEMIDAMVEVIPA  228 (257)
T ss_pred             ccccchhhhhhhhhhhcchhhHHHhhhhhhcc-ccCCCHHHHHHHHHHHhcC
Confidence            998754221110       0 00000000111 1246899998888887753

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.88  E-value=2.5e-22  Score=163.82  Aligned_cols=179  Identities=18%  Similarity=0.202  Sum_probs=151.7

Q ss_pred             CCCcHHHHHHHHHHHHhc-CCCeEEEEccCCCHHHHHHHHHHHHHHhC--CccEEEeCCCCCC--CCCCCCCCHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFG--KLDILVNAAAGNF--LVPAEDLSPNGFRTV   75 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~g--~id~li~~ag~~~--~~~~~~~~~~~~~~~   75 (257)
                      ++|++++|+.++++|.+. +.++.++.+|.++.++   ..+.+.+...  .|-++|||+|...  +..+.+.+.+.+++.
T Consensus        79 IsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~---~ye~i~~~l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~i  155 (312)
T KOG1014|consen   79 ISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDE---VYEKLLEKLAGLDVGILVNNVGMSYDYPESFLKYPEGELQNI  155 (312)
T ss_pred             EeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCch---hHHHHHHHhcCCceEEEEecccccCCCcHHHHhCchhhhhhe
Confidence            589999999999999877 5678899999998887   3333344333  5678999999776  688999999999999


Q ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEE
Q 025124           76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN  155 (257)
Q Consensus        76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~  155 (257)
                      +.+|+.+...+++.++|.|.+++        .|.|++++|.++..|.|.++.|+++|++++.|+++|..|++ .+||.|-
T Consensus       156 i~vN~~~~~~~t~~ilp~M~~r~--------~G~IvnigS~ag~~p~p~~s~ysasK~~v~~~S~~L~~Ey~-~~gI~Vq  226 (312)
T KOG1014|consen  156 INVNILSVTLLTQLILPGMVERK--------KGIIVNIGSFAGLIPTPLLSVYSASKAFVDFFSRCLQKEYE-SKGIFVQ  226 (312)
T ss_pred             eEEecchHHHHHHHhhhhhhcCC--------CceEEEeccccccccChhHHHHHHHHHHHHHHHHHHHHHHH-hcCeEEE
Confidence            99999999999999999999987        89999999999999999999999999999999999999999 9999999


Q ss_pred             EEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhcc
Q 025124          156 GIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  204 (257)
Q Consensus       156 ~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  204 (257)
                      ++.|..|.|.|.....             +..-..+|+..++..+.-+.
T Consensus       227 ~v~p~~VaTkm~~~~~-------------~sl~~ps~~tfaksal~tiG  262 (312)
T KOG1014|consen  227 SVIPYLVATKMAKYRK-------------PSLFVPSPETFAKSALNTIG  262 (312)
T ss_pred             EeehhheeccccccCC-------------CCCcCcCHHHHHHHHHhhcC
Confidence            9999999998753322             11123567777777766664

>PRK08017 oxidoreductase; Provisional

Probab=99.88  E-value=7.9e-21  Score=156.96  Aligned_cols=191  Identities=19%  Similarity=0.134  Sum_probs=151.1

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHh-CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      +|+.++++.+    .+.  .+.++.+|++|.+++..+++.+.... +++|++|||+|.....++.+.+.++++..+++|+
T Consensus        33 ~r~~~~~~~~----~~~--~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~  106 (256)
T PRK08017         33 CRKPDDVARM----NSL--GFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNF  106 (256)
T ss_pred             eCCHHHhHHH----HhC--CCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhh
Confidence            5666665543    222  36789999999999999999887754 6899999999977667788889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .|++.+++.+++.|.+.+        .++||++||..+..+.+....|+++|++++.++++++.++. +.+++++.|.||
T Consensus       107 ~g~~~~~~~~~~~~~~~~--------~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~-~~~i~v~~v~pg  177 (256)
T PRK08017        107 FGTHQLTMLLLPAMLPHG--------EGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDALRMELR-HSGIKVSLIEPG  177 (256)
T ss_pred             HHHHHHHHHHHHHHhhcC--------CCEEEEEcCcccccCCCCccHHHHHHHHHHHHHHHHHHHHh-hcCCEEEEEeCC
Confidence            999999999999998876        68899999998888888899999999999999999999998 889999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCC
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG  207 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  207 (257)
                      .+.|++......................+.+++|+++.+..++....
T Consensus       178 ~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~  224 (256)
T PRK08017        178 PIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALESPK  224 (256)
T ss_pred             CcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhCCC
Confidence            99987543221111000000011111235899999999999997543

>PRK08264 short chain dehydrogenase; Validated

Probab=99.86  E-value=7.6e-20  Score=149.51  Aligned_cols=159  Identities=25%  Similarity=0.251  Sum_probs=138.0

Q ss_pred             CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCC-CCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Q 025124           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG-NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG   97 (257)
Q Consensus        19 ~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~   97 (257)
                      +.++.++.+|++|.++++.+++.    ++++|++||++|. ....++.+.+.++++..+++|+.+++.+.+++.+.+.+.
T Consensus        48 ~~~~~~~~~D~~~~~~~~~~~~~----~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  123 (238)
T PRK08264         48 GPRVVPLQLDVTDPASVAAAAEA----ASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAAN  123 (238)
T ss_pred             CCceEEEEecCCCHHHHHHHHHh----cCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence            45788999999999998887764    4789999999998 556778888999999999999999999999999999876


Q ss_pred             CCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHH
Q 025124           98 GRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR  177 (257)
Q Consensus        98 ~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~  177 (257)
                      +        .++++++||..+..+.++...|+++|++++++++.++.++. +.|++++.++||.++|++.....      
T Consensus       124 ~--------~~~~v~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~~~~-~~~i~~~~v~pg~v~t~~~~~~~------  188 (238)
T PRK08264        124 G--------GGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRAELA-PQGTRVLGVHPGPIDTDMAAGLD------  188 (238)
T ss_pred             C--------CCEEEEEcChhhccCCCCchHhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeCCcccccccccCC------
Confidence            5        68899999999888888899999999999999999999998 88999999999999987532110      


Q ss_pred             HHhhhhccCCCCCCHHhHHHHHHHhccC
Q 025124          178 SKATDYMAAYKFGEKWDIAMAALYLASD  205 (257)
Q Consensus       178 ~~~~~~~~~~~~~~~~dva~~~~~l~~~  205 (257)
                               ....+++++++.++..+..
T Consensus       189 ---------~~~~~~~~~a~~~~~~~~~  207 (238)
T PRK08264        189 ---------APKASPADVARQILDALEA  207 (238)
T ss_pred             ---------cCCCCHHHHHHHHHHHHhC
Confidence                     1247889999999988864

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2.9e-20  Score=150.85  Aligned_cols=171  Identities=17%  Similarity=0.134  Sum_probs=134.8

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC--CCCCCCCHHHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL--VPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n   79 (257)
                      +|++++.+++    .+. .++.++.+|++|.++++++++.+.+  +++|++|||+|....  .++.+.+.++++..+++|
T Consensus        32 ~r~~~~~~~~----~~~-~~~~~~~~D~~d~~~~~~~~~~~~~--~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n  104 (225)
T PRK08177         32 VRGPQQDTAL----QAL-PGVHIEKLDMNDPASLDQLLQRLQG--QRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTN  104 (225)
T ss_pred             eCCCcchHHH----Hhc-cccceEEcCCCCHHHHHHHHHHhhc--CCCCEEEEcCcccCCCCCCcccCCHHHHhhheeee
Confidence            4555554432    222 3567889999999999999998854  589999999997533  456788999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccccc---ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEE
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT---WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~---~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~  156 (257)
                      +.+++.+.+++++.+.+.         .+.++++||..+..+.   ..+..|+++|++++.|+++++.|+. ++||++++
T Consensus       105 ~~~~~~l~~~~~~~~~~~---------~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~-~~~i~v~~  174 (225)
T PRK08177        105 AIAPIRLARRLLGQVRPG---------QGVLAFMSSQLGSVELPDGGEMPLYKASKAALNSMTRSFVAELG-EPTLTVLS  174 (225)
T ss_pred             eeHHHHHHHHHHHhhhhc---------CCEEEEEccCccccccCCCCCccchHHHHHHHHHHHHHHHHHhh-cCCeEEEE
Confidence            999999999999998753         4789999987665432   3567899999999999999999998 88999999


Q ss_pred             EecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCC
Q 025124          157 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (257)
Q Consensus       157 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  206 (257)
                      |+||+++|++....                 ...++++.+..++..+...
T Consensus       175 i~PG~i~t~~~~~~-----------------~~~~~~~~~~~~~~~~~~~  207 (225)
T PRK08177        175 MHPGWVKTDMGGDN-----------------APLDVETSVKGLVEQIEAA  207 (225)
T ss_pred             EcCCceecCCCCCC-----------------CCCCHHHHHHHHHHHHHhC
Confidence            99999999864221                 1245677777777777543

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.86  E-value=8.8e-20  Score=147.76  Aligned_cols=182  Identities=18%  Similarity=0.167  Sum_probs=143.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC--CCCCCCCCHHHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n   79 (257)
                      +|+.+.++++    ...  .+.++.+|+++.++++++++++..  +++|++|||+|...  ...+.+.+.++|+..+++|
T Consensus        32 ~r~~~~~~~~----~~~--~~~~~~~D~~~~~~v~~~~~~~~~--~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n  103 (222)
T PRK06953         32 ARDAAALAAL----QAL--GAEALALDVADPASVAGLAWKLDG--EALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTN  103 (222)
T ss_pred             ECCHHHHHHH----Hhc--cceEEEecCCCHHHHHHHHHHhcC--CCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhh
Confidence            4665555443    222  356799999999999998877642  47999999999753  3456677999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccc---hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEE
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ---IHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~---~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~  156 (257)
                      +.+++.+++++++.|.+.         .|++++++|..+..+....   ..|+++|++++++++.++.++.   +++++.
T Consensus       104 ~~~~~~l~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~---~i~v~~  171 (222)
T PRK06953        104 VLGPMQLLPILLPLVEAA---------GGVLAVLSSRMGSIGDATGTTGWLYRASKAALNDALRAASLQAR---HATCIA  171 (222)
T ss_pred             hhhHHHHHHHHHHhhhcc---------CCeEEEEcCcccccccccCCCccccHHhHHHHHHHHHHHhhhcc---CcEEEE
Confidence            999999999999988653         5789999998776554322   2599999999999999998864   699999


Q ss_pred             EecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCC
Q 025124          157 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG  220 (257)
Q Consensus       157 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg  220 (257)
                      |+||+++|++...                 .....+++.++.++.++.......+|..+..|++
T Consensus       172 v~Pg~i~t~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (222)
T PRK06953        172 LHPGWVRTDMGGA-----------------QAALDPAQSVAGMRRVIAQATRRDNGRFFQYDGV  218 (222)
T ss_pred             ECCCeeecCCCCC-----------------CCCCCHHHHHHHHHHHHHhcCcccCceEEeeCCc
Confidence            9999999986431                 1235788999999998877666788899888876

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.5e-19  Score=146.52  Aligned_cols=180  Identities=21%  Similarity=0.221  Sum_probs=144.8

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.+.+    ..++++.+|++|+++++++++++    +++|++||++|.....++.+.+.++|...+++|+.
T Consensus        33 ~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~----~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~  104 (227)
T PRK08219         33 GRPAERLDELAAEL----PGATPFPVDLTDPEAIAAAVEQL----GRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVV  104 (227)
T ss_pred             eCCHHHHHHHHHHh----ccceEEecCCCCHHHHHHHHHhc----CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhH
Confidence            56766665554332    24788999999999988887653    58999999999876677778899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.+.+.+++.+.++         .++++++||..+..+.++...|+.+|.+++.+++.++.++. .. ++++.|.||.
T Consensus       105 ~~~~~~~~~~~~~~~~---------~~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~~~~~~~~~~~-~~-i~~~~i~pg~  173 (227)
T PRK08219        105 APAELTRLLLPALRAA---------HGHVVFINSGAGLRANPGWGSYAASKFALRALADALREEEP-GN-VRVTSVHPGR  173 (227)
T ss_pred             HHHHHHHHHHHHHHhC---------CCeEEEEcchHhcCcCCCCchHHHHHHHHHHHHHHHHHHhc-CC-ceEEEEecCC
Confidence            9999999999999875         47899999999888888899999999999999999999876 55 9999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCC
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  206 (257)
                      +.+++.....      .......+..++.+++|+++.++++++..
T Consensus       174 ~~~~~~~~~~------~~~~~~~~~~~~~~~~dva~~~~~~l~~~  212 (227)
T PRK08219        174 TDTDMQRGLV------AQEGGEYDPERYLRPETVAKAVRFAVDAP  212 (227)
T ss_pred             ccchHhhhhh------hhhccccCCCCCCCHHHHHHHHHHHHcCC
Confidence            9876432111      11111223356789999999999999754

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.80  E-value=7.3e-18  Score=171.89  Aligned_cols=145  Identities=13%  Similarity=0.044  Sum_probs=129.8

Q ss_pred             HHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHH
Q 025124            7 VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM   86 (257)
Q Consensus         7 ~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l   86 (257)
                      ++.+..+++.+.|.++.++.||++|.++++++++++.++ ++||+||||||+.....+.+.+.++|++++++|+.|.+++
T Consensus      2081 ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~L 2159 (2582)
T TIGR02813      2081 EIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLSL 2159 (2582)
T ss_pred             HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHH
Confidence            344556667777889999999999999999999999887 6899999999998888899999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCC
Q 025124           87 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA  166 (257)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~  166 (257)
                      ++++.+.+            .++||++||..+..+.++++.|+++|.++++|++.++.++.   +++|++|.||.++|+|
T Consensus      2160 l~al~~~~------------~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~---~irV~sI~wG~wdtgm 2224 (2582)
T TIGR02813      2160 LAALNAEN------------IKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNP---SAKVMSFNWGPWDGGM 2224 (2582)
T ss_pred             HHHHHHhC------------CCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC---CcEEEEEECCeecCCc
Confidence            98886643            34699999999999999999999999999999999999875   5999999999999876


Q ss_pred             C
Q 025124          167 G  167 (257)
Q Consensus       167 ~  167 (257)
                      .
T Consensus      2225 ~ 2225 (2582)
T TIGR02813      2225 V 2225 (2582)
T ss_pred             c
Confidence            5

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.79  E-value=2.5e-17  Score=135.34  Aligned_cols=148  Identities=11%  Similarity=0.055  Sum_probs=111.6

Q ss_pred             EEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCC
Q 025124           23 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQA  102 (257)
Q Consensus        23 ~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~  102 (257)
                      .++.+|++|.+++.+       .++++|++|||||....   .+.+.++|+..+++|+.+++.++++++|.|.++.... 
T Consensus        61 ~~~~~D~~~~~~~~~-------~~~~iDilVnnAG~~~~---~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~-  129 (245)
T PRK12367         61 EWIKWECGKEESLDK-------QLASLDVLILNHGINPG---GRQDPENINKALEINALSSWRLLELFEDIALNNNSQI-  129 (245)
T ss_pred             eEEEeeCCCHHHHHH-------hcCCCCEEEECCccCCc---CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCC-
Confidence            578899999987653       35789999999997432   3468899999999999999999999999997642000 


Q ss_pred             CCCCCceEEEEcccccccccccchhhHHHHHHHHHHH---HHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHHHH
Q 025124          103 SSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT---RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK  179 (257)
Q Consensus       103 ~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~---~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~  179 (257)
                          ++.+++.+|.++..+ ++.+.|++||+|+..+.   +.++.|+. ..||+++.+.||+++|++..           
T Consensus       130 ----g~~iiv~ss~a~~~~-~~~~~Y~aSKaal~~~~~l~~~l~~e~~-~~~i~v~~~~pg~~~t~~~~-----------  192 (245)
T PRK12367        130 ----PKEIWVNTSEAEIQP-ALSPSYEISKRLIGQLVSLKKNLLDKNE-RKKLIIRKLILGPFRSELNP-----------  192 (245)
T ss_pred             ----CeEEEEEecccccCC-CCCchhHHHHHHHHHHHHHHHHHHHhhc-ccccEEEEecCCCcccccCc-----------
Confidence                233444455555444 35678999999986543   44444556 78999999999999887520           


Q ss_pred             hhhhccCCCCCCHHhHHHHHHHhccC
Q 025124          180 ATDYMAAYKFGEKWDIAMAALYLASD  205 (257)
Q Consensus       180 ~~~~~~~~~~~~~~dva~~~~~l~~~  205 (257)
                             ....+|+++|+.+++.+..
T Consensus       193 -------~~~~~~~~vA~~i~~~~~~  211 (245)
T PRK12367        193 -------IGIMSADFVAKQILDQANL  211 (245)
T ss_pred             -------cCCCCHHHHHHHHHHHHhc
Confidence                   1247899999999999964

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.71  E-value=2.8e-16  Score=121.93  Aligned_cols=135  Identities=18%  Similarity=0.138  Sum_probs=117.0

Q ss_pred             HHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHH
Q 025124           12 VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL   91 (257)
Q Consensus        12 ~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   91 (257)
                      .+++.+.+.++.++.+|++++++++.+++++.+.++++|++||++|......+.+.+.++++..+++|+.+++.+.+.+.
T Consensus        45 ~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  124 (180)
T smart00822       45 LAELEALGAEVTVVACDVADRAALAAALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTR  124 (180)
T ss_pred             HHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhc
Confidence            34555556788899999999999999999999999999999999998766677888999999999999999999999883


Q ss_pred             HHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccc
Q 025124           92 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK  163 (257)
Q Consensus        92 ~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~  163 (257)
                      +    .+        .++++++||..+..+.++...|+++|.++..|++.++     ..|++++.+.||++.
T Consensus       125 ~----~~--------~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~~~~~~~~-----~~~~~~~~~~~g~~~  179 (180)
T smart00822      125 D----LP--------LDFFVLFSSVAGVLGNPGQANYAAANAFLDALAAHRR-----ARGLPATSINWGAWA  179 (180)
T ss_pred             c----CC--------cceEEEEccHHHhcCCCCchhhHHHHHHHHHHHHHHH-----hcCCceEEEeecccc
Confidence            2    22        5789999999998898999999999999999998765     446889999999875

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.70  E-value=1.9e-15  Score=131.70  Aligned_cols=166  Identities=14%  Similarity=0.140  Sum_probs=118.5

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.+++++.   +.....++..+.+|++|.+++.+.       ++++|++|||||....   .+.+.+++++.+++|+.
T Consensus       209 ~r~~~~l~~~---~~~~~~~v~~v~~Dvsd~~~v~~~-------l~~IDiLInnAGi~~~---~~~s~e~~~~~~~vNv~  275 (406)
T PRK07424        209 TSNSDKITLE---INGEDLPVKTLHWQVGQEAALAEL-------LEKVDILIINHGINVH---GERTPEAINKSYEVNTF  275 (406)
T ss_pred             eCCHHHHHHH---HhhcCCCeEEEEeeCCCHHHHHHH-------hCCCCEEEECCCcCCC---CCCCHHHHHHHHHHHHH
Confidence            4565554332   222234577889999999876554       4689999999996533   36788999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      |++.++++++|.|++++.+.    .++.++++|+ +. ...+..+.|++||+|+.+|+. ++++.   .++.+..+.||.
T Consensus       276 g~i~Li~a~lp~m~~~~~~~----~~~iiVn~Ss-a~-~~~~~~~~Y~ASKaAl~~l~~-l~~~~---~~~~I~~i~~gp  345 (406)
T PRK07424        276 SAWRLMELFFTTVKTNRDKA----TKEVWVNTSE-AE-VNPAFSPLYELSKRALGDLVT-LRRLD---APCVVRKLILGP  345 (406)
T ss_pred             HHHHHHHHHHHHHHhcCCCC----CCeEEEEEcc-cc-ccCCCchHHHHHHHHHHHHHH-HHHhC---CCCceEEEEeCC
Confidence            99999999999998754100    0245666665 33 333456789999999999985 44442   356677788999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCC
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK  208 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  208 (257)
                      +.|++.                 + ....+||++|+.+++.++....
T Consensus       346 ~~t~~~-----------------~-~~~~spe~vA~~il~~i~~~~~  374 (406)
T PRK07424        346 FKSNLN-----------------P-IGVMSADWVAKQILKLAKRDFR  374 (406)
T ss_pred             CcCCCC-----------------c-CCCCCHHHHHHHHHHHHHCCCC
Confidence            887642                 1 1247999999999999976543

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.65  E-value=1.5e-15  Score=119.17  Aligned_cols=140  Identities=20%  Similarity=0.187  Sum_probs=109.4

Q ss_pred             HHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHH
Q 025124            7 VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM   86 (257)
Q Consensus         7 ~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l   86 (257)
                      ..++..+++++.+.+++++.||++|+++++++++++.+++++|++|||.||......+.+.+.++++.++...+.|..++
T Consensus        40 ~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L  119 (181)
T PF08659_consen   40 EAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNL  119 (181)
T ss_dssp             THHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHH
Confidence            45578888998899999999999999999999999999999999999999998888999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccc
Q 025124           87 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK  163 (257)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~  163 (257)
                      .+.+.+    .+        -..+|++||.++..|.++++.|+++.++++.|++..+..     |.++.+|..|.+.
T Consensus       120 ~~~~~~----~~--------l~~~i~~SSis~~~G~~gq~~YaaAN~~lda~a~~~~~~-----g~~~~sI~wg~W~  179 (181)
T PF08659_consen  120 HEALEN----RP--------LDFFILFSSISSLLGGPGQSAYAAANAFLDALARQRRSR-----GLPAVSINWGAWD  179 (181)
T ss_dssp             HHHHTT----TT--------TSEEEEEEEHHHHTT-TTBHHHHHHHHHHHHHHHHHHHT-----TSEEEEEEE-EBS
T ss_pred             HHHhhc----CC--------CCeEEEECChhHhccCcchHhHHHHHHHHHHHHHHHHhC-----CCCEEEEEccccC
Confidence            988755    22        467999999999999999999999999999999977653     4667778777664

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.60  E-value=8.8e-15  Score=116.00  Aligned_cols=161  Identities=17%  Similarity=0.157  Sum_probs=136.6

Q ss_pred             CCCcHHHHHHHHHHHHhcC----CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCC-------------
Q 025124            1 MGRRKTVLRSAVAALHSLG----IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP-------------   63 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~----~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~-------------   63 (257)
                      ++|+-++.+++++.|.+..    .++.++.+|++|..++.++..++.++|.++|.+..|||++....             
T Consensus        38 tcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsn  117 (341)
T KOG1478|consen   38 TCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSN  117 (341)
T ss_pred             EeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhc
Confidence            4799999999999998773    46789999999999999999999999999999999999664321             


Q ss_pred             --------------CCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccc--------
Q 025124           64 --------------AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA--------  121 (257)
Q Consensus        64 --------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~--------  121 (257)
                                    .-..+.|++...+++|+.|+|.+.+.+.|++..+.        +..+|++||..+..-        
T Consensus       118 pv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll~~~~--------~~~lvwtSS~~a~kk~lsleD~q  189 (341)
T KOG1478|consen  118 PVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLLCHSD--------NPQLVWTSSRMARKKNLSLEDFQ  189 (341)
T ss_pred             hhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHhhcCC--------CCeEEEEeecccccccCCHHHHh
Confidence                          12345678889999999999999999999999876        568999999876532        


Q ss_pred             -cccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCC
Q 025124          122 -TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK  170 (257)
Q Consensus       122 -~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~  170 (257)
                       ..+...|..||.+.+-|.-++.+.+. +.|+...+++||...|.+....
T Consensus       190 ~~kg~~pY~sSKrl~DlLh~A~~~~~~-~~g~~qyvv~pg~~tt~~~~~~  238 (341)
T KOG1478|consen  190 HSKGKEPYSSSKRLTDLLHVALNRNFK-PLGINQYVVQPGIFTTNSFSEY  238 (341)
T ss_pred             hhcCCCCcchhHHHHHHHHHHHhcccc-ccchhhhcccCceeecchhhhh
Confidence             23556899999999999999999988 8899999999999977654433

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.59  E-value=1.4e-13  Score=123.34  Aligned_cols=204  Identities=11%  Similarity=0.011  Sum_probs=138.5

Q ss_pred             CCcHHHHHHHHHHHHhc-----C----CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHH
Q 025124            2 GRRKTVLRSAVAALHSL-----G----IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGF   72 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~-----~----~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~   72 (257)
                      +|+.++++.+.+++.+.     |    .++.++.+|++|.+++...       ++++|+||||+|....      ...++
T Consensus       111 ~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a-------LggiDiVVn~AG~~~~------~v~d~  177 (576)
T PLN03209        111 VRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA-------LGNASVVICCIGASEK------EVFDV  177 (576)
T ss_pred             eCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH-------hcCCCEEEEccccccc------cccch
Confidence            68888888877766531     2    3588999999999887653       4689999999996432      12246


Q ss_pred             HHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccc-cccccchhhHHHHHHHHHHHHHHHHHhcCCCC
Q 025124           73 RTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYA  151 (257)
Q Consensus        73 ~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~-~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~g  151 (257)
                      ...+++|+.+..++++++.+.    +        .++||++||.++. .+.+. ..|. +|.++..+.+.+..++. ..|
T Consensus       178 ~~~~~VN~~Gt~nLl~Aa~~a----g--------VgRIV~VSSiga~~~g~p~-~~~~-sk~~~~~~KraaE~~L~-~sG  242 (576)
T PLN03209        178 TGPYRIDYLATKNLVDAATVA----K--------VNHFILVTSLGTNKVGFPA-AILN-LFWGVLCWKRKAEEALI-ASG  242 (576)
T ss_pred             hhHHHHHHHHHHHHHHHHHHh----C--------CCEEEEEccchhcccCccc-cchh-hHHHHHHHHHHHHHHHH-HcC
Confidence            778899999999998887543    2        4789999998763 22222 1244 77888888888888888 889


Q ss_pred             eEEEEEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcH
Q 025124          152 IRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPK  231 (257)
Q Consensus       152 i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~  231 (257)
                      |+++.|+||++.|++.... ..... .......+.++.++.+|||+.+++++++... ..++++.+-.+-..  +.--.+
T Consensus       243 IrvTIVRPG~L~tp~d~~~-~t~~v-~~~~~d~~~gr~isreDVA~vVvfLasd~~a-s~~kvvevi~~~~~--p~~~~~  317 (576)
T PLN03209        243 LPYTIVRPGGMERPTDAYK-ETHNL-TLSEEDTLFGGQVSNLQVAELMACMAKNRRL-SYCKVVEVIAETTA--PLTPME  317 (576)
T ss_pred             CCEEEEECCeecCCccccc-cccce-eeccccccCCCccCHHHHHHHHHHHHcCchh-ccceEEEEEeCCCC--CCCCHH
Confidence            9999999999987743211 11111 1111224556778999999999999985432 23677777766322  223334


Q ss_pred             HHHHHHH
Q 025124          232 EAVNQLS  238 (257)
Q Consensus       232 ~~~~~~~  238 (257)
                      ..+.+|-
T Consensus       318 ~~~~~ip  324 (576)
T PLN03209        318 ELLAKIP  324 (576)
T ss_pred             HHHHhcc
Confidence            4445553

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.59  E-value=4.1e-13  Score=114.69  Aligned_cols=214  Identities=14%  Similarity=0.049  Sum_probs=140.0

Q ss_pred             HHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCC-----------------C--------
Q 025124           10 SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP-----------------A--------   64 (257)
Q Consensus        10 ~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~-----------------~--------   64 (257)
                      .+.+.+.+.|.++..+.||+++.++++++++++.+++|+||+||||+|.+....                 +        
T Consensus        93 a~~~~a~~~G~~a~~i~~DVss~E~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~  172 (398)
T PRK13656         93 AFDKFAKAAGLYAKSINGDAFSDEIKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTD  172 (398)
T ss_pred             HHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCccccc
Confidence            344555566777888999999999999999999999999999999999763311                 1        


Q ss_pred             ---------CCCCHHHHHHHHHHHhH-HHHHHHHHH--HHHHHhcCCCCCCCCCCceEEEEcccccccccccc--hhhHH
Q 025124           65 ---------EDLSPNGFRTVIEIDSV-GTFIMCHEA--LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ--IHVSA  130 (257)
Q Consensus        65 ---------~~~~~~~~~~~~~~n~~-~~~~l~~~~--~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~--~~Y~~  130 (257)
                               ...+.++++.+++++-- .-..++++.  .+.|.+          +++++-.|..+.....|.+  +..+.
T Consensus       173 ~~~i~~~s~~~~~~~ei~~Tv~vMggedw~~Wi~al~~a~lla~----------g~~~va~TY~G~~~t~p~Y~~g~mG~  242 (398)
T PRK13656        173 KDVIIEVTVEPATEEEIADTVKVMGGEDWELWIDALDEAGVLAE----------GAKTVAYSYIGPELTHPIYWDGTIGK  242 (398)
T ss_pred             ccceeEEEEeeCCHHHHHHHHHhhccchHHHHHHHHHhcccccC----------CcEEEEEecCCcceeecccCCchHHH
Confidence                     13566677776654433 123333333  344433          6889999998888777766  58899


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcc
Q 025124          131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYV  210 (257)
Q Consensus       131 sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  210 (257)
                      +|+++++-++.|+.+|+ +.|||+|++..|.+.|.-...-..-........+.+.  .-+..|.+-+-+..|..+.- |-
T Consensus       243 AKa~LE~~~r~La~~L~-~~giran~i~~g~~~T~Ass~Ip~~~ly~~~l~kvmk--~~g~he~~ieq~~rl~~~~l-y~  318 (398)
T PRK13656        243 AKKDLDRTALALNEKLA-AKGGDAYVSVLKAVVTQASSAIPVMPLYISLLFKVMK--EKGTHEGCIEQIYRLFSERL-YR  318 (398)
T ss_pred             HHHHHHHHHHHHHHHhh-hcCCEEEEEecCcccchhhhcCCCcHHHHHHHHHHHH--hcCCCCChHHHHHHHHHHhc-cc
Confidence            99999999999999999 8999999999999998633222111222222222222  22456667777777775421 11


Q ss_pred             cCcEEEec-CCcccCCCCCCcHHHHHHH
Q 025124          211 NGNTLIVD-GGNWLSNPRDLPKEAVNQL  237 (257)
Q Consensus       211 ~G~~~~~d-gg~~~~~~~~~~~~~~~~~  237 (257)
                      .|..-.+| .|+.......+.+....+.
T Consensus       319 ~~~~~~~d~~~r~r~d~~el~~~vq~~v  346 (398)
T PRK13656        319 DGAIPEVDEEGRLRLDDWELRPDVQAAV  346 (398)
T ss_pred             CCCCCCcCCcCCcccchhhcCHHHHHHH
Confidence            24333355 4444443333444444333

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.55  E-value=1.3e-12  Score=111.89  Aligned_cols=172  Identities=17%  Similarity=0.110  Sum_probs=120.7

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+......+.+.+.  +.++.++.+|++|.+++.++++       ++|+|||+||.... +..+.++   +..+++|+.
T Consensus        37 ~r~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~l~~~~~-------~iD~Vih~Ag~~~~-~~~~~~~---~~~~~~Nv~  103 (324)
T TIGR03589        37 SRDELKQWEMQQKFP--APCLRFFIGDVRDKERLTRALR-------GVDYVVHAAALKQV-PAAEYNP---FECIRTNIN  103 (324)
T ss_pred             cCChhHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHh-------cCCEEEECcccCCC-chhhcCH---HHHHHHHHH
Confidence            344444433333331  2468899999999999887764       58999999996432 2222233   468999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++++++++.+.    +        .++||++||.....|   ...|+++|++.+.++++++.+.. ..|+++++++||.
T Consensus       104 g~~~ll~aa~~~----~--------~~~iV~~SS~~~~~p---~~~Y~~sK~~~E~l~~~~~~~~~-~~gi~~~~lR~g~  167 (324)
T TIGR03589       104 GAQNVIDAAIDN----G--------VKRVVALSTDKAANP---INLYGATKLASDKLFVAANNISG-SKGTRFSVVRYGN  167 (324)
T ss_pred             HHHHHHHHHHHc----C--------CCEEEEEeCCCCCCC---CCHHHHHHHHHHHHHHHHHhhcc-ccCcEEEEEeecc
Confidence            999999998752    2        468999999755433   46799999999999999988777 7899999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhh---ccC------CCCCCHHhHHHHHHHhccC
Q 025124          162 IKDTAGVSKLAPEEIRSKATDY---MAA------YKFGEKWDIAMAALYLASD  205 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~---~~~------~~~~~~~dva~~~~~l~~~  205 (257)
                      +..+..  .. ...+.......   .+.      ..+.+++|++++++.++..
T Consensus       168 v~G~~~--~~-i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~  217 (324)
T TIGR03589       168 VVGSRG--SV-VPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLER  217 (324)
T ss_pred             eeCCCC--Cc-HHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhh
Confidence            997642  11 11222111111   111      2367899999999999864

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.51  E-value=2.1e-12  Score=110.53  Aligned_cols=188  Identities=13%  Similarity=0.064  Sum_probs=129.8

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|++|.++++.+++       ++|++||+||....    ..+.+.+...+++|+.+++++++++.+.+   . 
T Consensus        56 ~~~~~~~~D~~d~~~~~~~~~-------~~d~vih~A~~~~~----~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~-  120 (325)
T PLN02989         56 ERLKLFKADLLDEGSFELAID-------GCETVFHTASPVAI----TVKTDPQVELINPAVNGTINVLRTCTKVS---S-  120 (325)
T ss_pred             CceEEEeCCCCCchHHHHHHc-------CCCEEEEeCCCCCC----CCCCChHHHHHHHHHHHHHHHHHHHHHcC---C-
Confidence            468899999999998887775       58999999995422    22345678899999999999999987653   1 


Q ss_pred             CCCCCCCCceEEEEcccccccccc----------------------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEE
Q 025124          100 GQASSSSGGIIINISATLHYTATW----------------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~~~~----------------------~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v  157 (257)
                             .++||++||..++.+..                      ....|+.+|.+.+.+++.+..++    |+.++.+
T Consensus       121 -------~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~il  189 (325)
T PLN02989        121 -------VKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDN----EIDLIVL  189 (325)
T ss_pred             -------ceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHHc----CCeEEEE
Confidence                   36799999986543311                      01469999999999999887643    6899999


Q ss_pred             ecCcccCCCCCCC--CChHHHHHHhhhhccC----CCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcH
Q 025124          158 APGPIKDTAGVSK--LAPEEIRSKATDYMAA----YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPK  231 (257)
Q Consensus       158 ~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~----~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~  231 (257)
                      +|+.+..|.....  ..............+.    ..+.+++|+|++++.++....  . +..++++|+ .     .-..
T Consensus       190 R~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~~~r~~i~v~Dva~a~~~~l~~~~--~-~~~~ni~~~-~-----~s~~  260 (325)
T PLN02989        190 NPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHHRFVDVRDVALAHVKALETPS--A-NGRYIIDGP-V-----VTIK  260 (325)
T ss_pred             cCCceeCCCCCCCCCchHHHHHHHHcCCCCCCCcCcCeeEHHHHHHHHHHHhcCcc--c-CceEEEecC-C-----CCHH
Confidence            9999998865432  1111222211122222    356789999999999886432  1 336777543 2     2245


Q ss_pred             HHHHHHHHHHh
Q 025124          232 EAVNQLSRAVE  242 (257)
Q Consensus       232 ~~~~~~~~~~~  242 (257)
                      .+.+.|.+.+.
T Consensus       261 ei~~~i~~~~~  271 (325)
T PLN02989        261 DIENVLREFFP  271 (325)
T ss_pred             HHHHHHHHHCC
Confidence            66666666664

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.46  E-value=1.6e-11  Score=106.37  Aligned_cols=200  Identities=19%  Similarity=0.095  Sum_probs=134.4

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|++|.++++++++.     .++|+|||+||....    +.+.++++..+++|+.+++++++++.+.|....+
T Consensus        51 ~~~~~~~~Dl~d~~~~~~~~~~-----~~~D~Vih~A~~~~~----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~  121 (355)
T PRK10217         51 ERFAFEKVDICDRAELARVFTE-----HQPDCVMHLAAESHV----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTE  121 (355)
T ss_pred             CceEEEECCCcChHHHHHHHhh-----cCCCEEEECCcccCc----chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccc
Confidence            3577889999999998888775     269999999996432    2334567889999999999999999876431100


Q ss_pred             CCCCCCCCceEEEEccccccc-------------ccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCC
Q 025124          100 GQASSSSGGIIINISATLHYT-------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA  166 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~-------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~  166 (257)
                      .   .....++|++||...+.             +..+...|+.||.+.+.+++.++.++    ++++..++|+.+..|.
T Consensus       122 ~---~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~----~~~~~i~r~~~v~Gp~  194 (355)
T PRK10217        122 D---KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTY----GLPTLITNCSNNYGPY  194 (355)
T ss_pred             c---ccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh----CCCeEEEeeeeeeCCC
Confidence            0   00024799999864321             12345689999999999999998764    5788889999988775


Q ss_pred             CCCCCChHHHHHHhhhhc--c-------CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHH
Q 025124          167 GVSKLAPEEIRSKATDYM--A-------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQL  237 (257)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~  237 (257)
                      ......-..+........  +       ...+.+.+|+++++..++...   ..|..+++.+|..+.     ..+++..+
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~~~---~~~~~yni~~~~~~s-----~~~~~~~i  266 (355)
T PRK10217        195 HFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATTG---KVGETYNIGGHNERK-----NLDVVETI  266 (355)
T ss_pred             CCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHHHhcC---CCCCeEEeCCCCccc-----HHHHHHHH
Confidence            321111111111111111  1       224688999999999888642   246788888875443     45566666


Q ss_pred             HHHHhc
Q 025124          238 SRAVER  243 (257)
Q Consensus       238 ~~~~~~  243 (257)
                      .+...+
T Consensus       267 ~~~~~~  272 (355)
T PRK10217        267 CELLEE  272 (355)
T ss_pred             HHHhcc
Confidence            666554

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.41  E-value=1.6e-11  Score=106.13  Aligned_cols=199  Identities=13%  Similarity=0.047  Sum_probs=132.0

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|++|.+++.+++++.     ++|+|||+|+....    ..+.+++...+++|+.+++.+++++.+.   .. 
T Consensus        52 ~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~vih~A~~~~~----~~~~~~~~~~~~~N~~g~~~ll~a~~~~---~~-  118 (349)
T TIGR02622        52 KKIEDHFGDIRDAAKLRKAIAEF-----KPEIVFHLAAQPLV----RKSYADPLETFETNVMGTVNLLEAIRAI---GS-  118 (349)
T ss_pred             CCceEEEccCCCHHHHHHHHhhc-----CCCEEEECCccccc----ccchhCHHHHHHHhHHHHHHHHHHHHhc---CC-
Confidence            45778999999999999888864     68999999995322    2345567788999999999999987431   11 


Q ss_pred             CCCCCCCCceEEEEccccccc------------ccccchhhHHHHHHHHHHHHHHHHHhcCC----CCeEEEEEecCccc
Q 025124          100 GQASSSSGGIIINISATLHYT------------ATWYQIHVSAAKAAVDSITRSLALEWGTD----YAIRVNGIAPGPIK  163 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~----~gi~v~~v~Pg~v~  163 (257)
                             .+++|++||...+.            +..+...|+.+|.+.+.+++.++.++. +    +|++++.++|+.+.
T Consensus       119 -------~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~-~~~~~~~i~~~~lR~~~vy  190 (349)
T TIGR02622       119 -------VKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKACAELVIASYRSSFF-GVANFHGIKIASARAGNVI  190 (349)
T ss_pred             -------CCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHHHHHHHHHHHHHHHhh-cccccCCCcEEEEccCccc
Confidence                   35799999964331            123356799999999999999998875 3    48999999999999


Q ss_pred             CCCCCCC-CChHHHHHHhhhh--------ccCCCCCCHHhHHHHHHHhccCCCC--cccCcEEEecCCcccCCCCCCcHH
Q 025124          164 DTAGVSK-LAPEEIRSKATDY--------MAAYKFGEKWDIAMAALYLASDAGK--YVNGNTLIVDGGNWLSNPRDLPKE  232 (257)
Q Consensus       164 t~~~~~~-~~~~~~~~~~~~~--------~~~~~~~~~~dva~~~~~l~~~~~~--~~~G~~~~~dgg~~~~~~~~~~~~  232 (257)
                      .|..... ..-..+.......        .....+...+|++++++.++.....  ...|..+++.+|-   ....-...
T Consensus       191 Gp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~~---~~~~s~~~  267 (349)
T TIGR02622       191 GGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQHVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPRA---SDNARVVE  267 (349)
T ss_pred             CCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceeeHHHHHHHHHHHHHHHhhcCccccceeeeCCCc---ccCcCHHH
Confidence            8743111 1111111111111        1223467889999999887753111  1225688887541   01222455


Q ss_pred             HHHHHHHHHh
Q 025124          233 AVNQLSRAVE  242 (257)
Q Consensus       233 ~~~~~~~~~~  242 (257)
                      ++..+.+...
T Consensus       268 ~~~~i~~~~~  277 (349)
T TIGR02622       268 LVVDALEFWW  277 (349)
T ss_pred             HHHHHHHHhc
Confidence            5666655544

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.37  E-value=5.9e-11  Score=100.78  Aligned_cols=192  Identities=20%  Similarity=0.137  Sum_probs=130.5

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|++|++++.++++..     ++|+|||+|+....    +...+..+..+++|+.++..+++++.+.+.    
T Consensus        50 ~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~----  116 (317)
T TIGR01181        50 PRYRFVKGDIGDRELVSRLFTEH-----QPDAVVHFAAESHV----DRSISGPAAFIETNVVGTYTLLEAVRKYWH----  116 (317)
T ss_pred             CCcEEEEcCCcCHHHHHHHHhhc-----CCCEEEEcccccCc----hhhhhCHHHHHHHHHHHHHHHHHHHHhcCC----
Confidence            35788999999999998888753     59999999996432    223445677899999999999887765432    


Q ss_pred             CCCCCCCCceEEEEcccccccc------------cccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCC
Q 025124          100 GQASSSSGGIIINISATLHYTA------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG  167 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~~------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~  167 (257)
                             ..+++++||......            ......|+.+|.+.+.+++.++.+.    ++++..++|+.+..+..
T Consensus       117 -------~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~i~R~~~i~G~~~  185 (317)
T TIGR01181       117 -------EFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAASDHLVRAYHRTY----GLPALITRCSNNYGPYQ  185 (317)
T ss_pred             -------CceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHHHHHHHHHHHHHh----CCCeEEEEeccccCCCC
Confidence                   246999998543221            1133579999999999999988764    58899999999987653


Q ss_pred             CCCCChHHHHHHhhhhcc---------CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHHH
Q 025124          168 VSKLAPEEIRSKATDYMA---------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLS  238 (257)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~  238 (257)
                      .....-...........+         ...+.+.+|+++++..++...   ..|..+++.++..+.     ...+.+.+.
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~---~~~~~~~~~~~~~~s-----~~~~~~~i~  257 (317)
T TIGR01181       186 FPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKG---RVGETYNIGGGNERT-----NLEVVETIL  257 (317)
T ss_pred             CcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCC---CCCceEEeCCCCcee-----HHHHHHHHH
Confidence            222111111121111111         113567899999999998643   356788887765443     456666666


Q ss_pred             HHHhc
Q 025124          239 RAVER  243 (257)
Q Consensus       239 ~~~~~  243 (257)
                      +....
T Consensus       258 ~~~~~  262 (317)
T TIGR01181       258 ELLGK  262 (317)
T ss_pred             HHhCC
Confidence            66654

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.33  E-value=2.1e-10  Score=98.07  Aligned_cols=187  Identities=16%  Similarity=0.133  Sum_probs=124.2

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|+++.+++..+++       ++|++||+|+.....     ..+.....+++|+.++.++++++...   .. 
T Consensus        56 ~~~~~~~~Dl~~~~~~~~~~~-------~~d~vih~A~~~~~~-----~~~~~~~~~~~nv~gt~~ll~~~~~~---~~-  119 (322)
T PLN02986         56 ERLKLFKADLLEESSFEQAIE-------GCDAVFHTASPVFFT-----VKDPQTELIDPALKGTINVLNTCKET---PS-  119 (322)
T ss_pred             CceEEEecCCCCcchHHHHHh-------CCCEEEEeCCCcCCC-----CCCchhhhhHHHHHHHHHHHHHHHhc---CC-
Confidence            468889999999998887776       589999999964221     11223567899999999999887532   11 


Q ss_pred             CCCCCCCCceEEEEccccccc-ccc---------------------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEE
Q 025124          100 GQASSSSGGIIINISATLHYT-ATW---------------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~-~~~---------------------~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v  157 (257)
                             -++||++||.++.. +.+                     ....|+.+|.+.+.+++.+..+    +|++++.+
T Consensus       120 -------v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~----~~~~~~~l  188 (322)
T PLN02986        120 -------VKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKD----NGIDMVVL  188 (322)
T ss_pred             -------ccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHH----hCCeEEEE
Confidence                   35799999986531 110                     1356999999999998888764    36999999


Q ss_pred             ecCcccCCCCCCCCC-hHHHHHHhhhhc-----cCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcH
Q 025124          158 APGPIKDTAGVSKLA-PEEIRSKATDYM-----AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPK  231 (257)
Q Consensus       158 ~Pg~v~t~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~  231 (257)
                      +|+.+.+|....... .......+....     ....+.+++|+|++++.++....  ..| .+++.|+ .     .-..
T Consensus       189 rp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~Dva~a~~~al~~~~--~~~-~yni~~~-~-----~s~~  259 (322)
T PLN02986        189 NPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRFYRFVDVRDVALAHIKALETPS--ANG-RYIIDGP-I-----MSVN  259 (322)
T ss_pred             cccceeCCCCCCCCCccHHHHHHHHcCCCCCCCcCcceeEHHHHHHHHHHHhcCcc--cCC-cEEEecC-C-----CCHH
Confidence            999999886432211 111111111111     11347889999999999996532  234 6777432 2     2245


Q ss_pred             HHHHHHHHHHh
Q 025124          232 EAVNQLSRAVE  242 (257)
Q Consensus       232 ~~~~~~~~~~~  242 (257)
                      ++.+.|.+.+.
T Consensus       260 e~~~~i~~~~~  270 (322)
T PLN02986        260 DIIDILRELFP  270 (322)
T ss_pred             HHHHHHHHHCC
Confidence            66666666654

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.31  E-value=2.6e-10  Score=98.18  Aligned_cols=193  Identities=15%  Similarity=0.071  Sum_probs=124.2

Q ss_pred             CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Q 025124           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (257)
Q Consensus        19 ~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (257)
                      +.++.++.+|++|.+++..+++.+     .+|+|||+|+.....    ...+..+..+++|+.++.++++++.+.+.++.
T Consensus        59 ~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~A~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~  129 (340)
T PLN02653         59 KARMKLHYGDLSDASSLRRWLDDI-----KPDEVYNLAAQSHVA----VSFEMPDYTADVVATGALRLLEAVRLHGQETG  129 (340)
T ss_pred             cCceEEEEecCCCHHHHHHHHHHc-----CCCEEEECCcccchh----hhhhChhHHHHHHHHHHHHHHHHHHHhccccc
Confidence            346889999999999999888865     589999999965432    12234467789999999999999988765421


Q ss_pred             CCCCCCCCCceEEEEcccccccc----------cccchhhHHHHHHHHHHHHHHHHHhcCC---CCeEEEEEecCcccCC
Q 025124           99 RGQASSSSGGIIINISATLHYTA----------TWYQIHVSAAKAAVDSITRSLALEWGTD---YAIRVNGIAPGPIKDT  165 (257)
Q Consensus        99 ~~~~~~~~~g~ii~iss~~~~~~----------~~~~~~Y~~sK~a~~~l~~~la~e~~~~---~gi~v~~v~Pg~v~t~  165 (257)
                      .       --++|++||...+..          ..+...|+.+|.+.+.+++.++.++. -   .++.++.+.|+...+ 
T Consensus       130 ~-------~~~~v~~Ss~~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~-~~~~~~~~~~~~gp~~~~~-  200 (340)
T PLN02653        130 R-------QIKYYQAGSSEMYGSTPPPQSETTPFHPRSPYAVAKVAAHWYTVNYREAYG-LFACNGILFNHESPRRGEN-  200 (340)
T ss_pred             c-------ceeEEEeccHHHhCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcC-CeEEEeeeccccCCCCCcc-
Confidence            0       126888887643321          11356799999999999999988764 1   123333344443221 


Q ss_pred             CCCCCCChHHH---HHHhhh----------hccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHH
Q 025124          166 AGVSKLAPEEI---RSKATD----------YMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKE  232 (257)
Q Consensus       166 ~~~~~~~~~~~---~~~~~~----------~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~  232 (257)
                           ......   ......          ......+.+.+|++++++.++...    .+..+++.+|..+.     ..+
T Consensus       201 -----~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~~~~~~~----~~~~yni~~g~~~s-----~~e  266 (340)
T PLN02653        201 -----FVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAMWLMLQQE----KPDDYVVATEESHT-----VEE  266 (340)
T ss_pred             -----cchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHHHHHHhcC----CCCcEEecCCCcee-----HHH
Confidence                 111111   100001          111235689999999999998642    14568888775443     456


Q ss_pred             HHHHHHHHHhc
Q 025124          233 AVNQLSRAVER  243 (257)
Q Consensus       233 ~~~~~~~~~~~  243 (257)
                      +.+.+.+....
T Consensus       267 ~~~~i~~~~g~  277 (340)
T PLN02653        267 FLEEAFGYVGL  277 (340)
T ss_pred             HHHHHHHHcCC
Confidence            67777666654

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.28  E-value=5.1e-10  Score=96.83  Aligned_cols=199  Identities=17%  Similarity=0.097  Sum_probs=128.8

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|++|.+++.+++++     .++|+|||+|+......    ..+..+..+++|+.+++++++++.+.|.....
T Consensus        50 ~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~vih~A~~~~~~~----~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~  120 (352)
T PRK10084         50 ERYVFEHADICDRAELDRIFAQ-----HQPDAVMHLAAESHVDR----SITGPAAFIETNIVGTYVLLEAARNYWSALDE  120 (352)
T ss_pred             CceEEEEecCCCHHHHHHHHHh-----cCCCEEEECCcccCCcc----hhcCchhhhhhhhHHHHHHHHHHHHhcccccc
Confidence            4577899999999999888875     27999999999643211    12234668999999999999999887643210


Q ss_pred             CCCCCCCCceEEEEcccccccc---------------------cccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124          100 GQASSSSGGIIINISATLHYTA---------------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~~---------------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      ..   ....++|++||...+..                     ..+...|+.+|.+.+.+++.++.++    |+++..+.
T Consensus       121 ~~---~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----g~~~vilr  193 (352)
T PRK10084        121 DK---KNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY----GLPTIVTN  193 (352)
T ss_pred             cc---ccceeEEEecchhhcCCCCccccccccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh----CCCEEEEe
Confidence            00   00247999998643221                     1234689999999999999988764    46777788


Q ss_pred             cCcccCCCCCCCCChHHHHHHhhhhc--c-------CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCC
Q 025124          159 PGPIKDTAGVSKLAPEEIRSKATDYM--A-------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDL  229 (257)
Q Consensus       159 Pg~v~t~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~  229 (257)
                      |+.+..|.......-...........  +       ...+.+++|++++++.++...   ..|..+++.++....     
T Consensus       194 ~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~a~~~~l~~~---~~~~~yni~~~~~~s-----  265 (352)
T PRK10084        194 CSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALYKVVTEG---KAGETYNIGGHNEKK-----  265 (352)
T ss_pred             ccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHhcC---CCCceEEeCCCCcCc-----
Confidence            88888765321111111111111111  1       123678999999999888642   246788887764332     


Q ss_pred             cHHHHHHHHHHHh
Q 025124          230 PKEAVNQLSRAVE  242 (257)
Q Consensus       230 ~~~~~~~~~~~~~  242 (257)
                      ...+.+.+.+...
T Consensus       266 ~~~~~~~i~~~~~  278 (352)
T PRK10084        266 NLDVVLTICDLLD  278 (352)
T ss_pred             HHHHHHHHHHHhc
Confidence            2444555555444

>PLN02650 dihydroflavonol-4-reductase

Probab=99.28  E-value=4.6e-10  Score=97.10  Aligned_cols=204  Identities=12%  Similarity=0.028  Sum_probs=128.3

Q ss_pred             CCcHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      +|+.+.++.+...+...  ..++.++.+|++|.+.++.+++       .+|+|||+|+.....   .  .+.++..+++|
T Consensus        36 ~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-------~~d~ViH~A~~~~~~---~--~~~~~~~~~~N  103 (351)
T PLN02650         36 VRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR-------GCTGVFHVATPMDFE---S--KDPENEVIKPT  103 (351)
T ss_pred             EcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------CCCEEEEeCCCCCCC---C--CCchhhhhhHH
Confidence            35554444443332211  2357889999999988887765       589999999853211   1  12235678999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccccc----c------------------cchhhHHHHHHHHH
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----W------------------YQIHVSAAKAAVDS  137 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~----~------------------~~~~Y~~sK~a~~~  137 (257)
                      +.+++++++++.+...           .++||++||...+.+.    +                  ....|+.+|.+.+.
T Consensus       104 v~gt~~ll~aa~~~~~-----------~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~  172 (351)
T PLN02650        104 VNGMLSIMKACAKAKT-----------VRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEK  172 (351)
T ss_pred             HHHHHHHHHHHHhcCC-----------ceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccchHHHHHHHHHH
Confidence            9999999999876421           2469999997543211    0                  11369999999999


Q ss_pred             HHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHHH--Hhhhh------ccCCCCCCHHhHHHHHHHhccCCCCc
Q 025124          138 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS--KATDY------MAAYKFGEKWDIAMAALYLASDAGKY  209 (257)
Q Consensus       138 l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~--~~~~~------~~~~~~~~~~dva~~~~~l~~~~~~~  209 (257)
                      +++.++.+    +|++++.++|+.+..|.............  .....      .....+.+.+|++++++.++....  
T Consensus       173 ~~~~~~~~----~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~v~V~Dva~a~~~~l~~~~--  246 (351)
T PLN02650        173 AAWKYAAE----NGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQGQFVHLDDLCNAHIFLFEHPA--  246 (351)
T ss_pred             HHHHHHHH----cCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccCcCCCcceeeHHHHHHHHHHHhcCcC--
Confidence            99998765    36999999999999886433221111110  00000      112467899999999999996432  


Q ss_pred             ccCcEEEecCCcccCCCCCCcHHHHHHHHHHH
Q 025124          210 VNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAV  241 (257)
Q Consensus       210 ~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~~~  241 (257)
                      ..| .+. .+|..     .-...+.+.|.+..
T Consensus       247 ~~~-~~i-~~~~~-----~s~~el~~~i~~~~  271 (351)
T PLN02650        247 AEG-RYI-CSSHD-----ATIHDLAKMLREKY  271 (351)
T ss_pred             cCc-eEE-ecCCC-----cCHHHHHHHHHHhC
Confidence            123 443 33322     22345566665544

>PRK06720 hypothetical protein; Provisional

Probab=99.27  E-value=7.8e-11  Score=91.14  Aligned_cols=114  Identities=18%  Similarity=0.124  Sum_probs=90.7

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHHh
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~   80 (257)
                      +|+.+.++++.+++.+.+.++.++.+|+++.++++++++++.+.+|++|++|||||+... ..+.+.++++ ++  .+|+
T Consensus        47 ~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~  123 (169)
T PRK06720         47 DIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCI  123 (169)
T ss_pred             ECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccccchhH-hh--ceec
Confidence            577778888888887767778889999999999999999999999999999999997664 5555555555 33  6677


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccc
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY  119 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~  119 (257)
                      .+.++.++.+.+.|.++++. ...+..|++..||+.++.
T Consensus       124 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  161 (169)
T PRK06720        124 NDVWIEIKQLTSSFMKQQEE-VVLSDLPIFGIIGTKGQS  161 (169)
T ss_pred             cHHHHHHHHHHHHHHhcCCE-EEeecCceeeEecccccc
Confidence            88899999999999876432 223446899999987654

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.26  E-value=1.2e-09  Score=94.59  Aligned_cols=209  Identities=15%  Similarity=0.066  Sum_probs=131.2

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCC-CCCCCHHHH--HHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP-AEDLSPNGF--RTVIEI   78 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~-~~~~~~~~~--~~~~~~   78 (257)
                      +|+.+..+.+...+.. +.++.++.+|+++.+++..++.       ++|+|||+|+...... ....+.+.+  .+++++
T Consensus        41 ~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~  112 (353)
T PLN02896         41 LRDPAKSLHLLSKWKE-GDRLRLFRADLQEEGSFDEAVK-------GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDP  112 (353)
T ss_pred             eCChHHHHHHHHhhcc-CCeEEEEECCCCCHHHHHHHHc-------CCCEEEECCccccCCccccccchhhhhhHHhHHH
Confidence            4555555554444432 4568899999999988877764       5899999999654321 122233333  457788


Q ss_pred             HhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccccc-------------------------ccchhhHHHHH
Q 025124           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-------------------------WYQIHVSAAKA  133 (257)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~-------------------------~~~~~Y~~sK~  133 (257)
                      |+.+++++++++.+..   .        .++||++||...+...                         +....|+.||.
T Consensus       113 ~~~g~~~ll~~~~~~~---~--------~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~  181 (353)
T PLN02896        113 AIKGTLNVLKSCLKSK---T--------VKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKL  181 (353)
T ss_pred             HHHHHHHHHHHHHhcC---C--------ccEEEEEechhhccccccCCCCCCccCcccCCcHHHhhccCCCCccHHHHHH
Confidence            8899999999886542   1        3579999997554311                         01137999999


Q ss_pred             HHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCCh--HHHHHHhhhhcc-------------CCCCCCHHhHHHH
Q 025124          134 AVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP--EEIRSKATDYMA-------------AYKFGEKWDIAMA  198 (257)
Q Consensus       134 a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~-------------~~~~~~~~dva~~  198 (257)
                      +.+.+++.++.+    +|++++.++|+.+..|........  ............             ...+.+.+|++++
T Consensus       182 ~~E~~~~~~~~~----~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a  257 (353)
T PLN02896        182 LTEEAAFKYAKE----NGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMGSIALVHIEDICDA  257 (353)
T ss_pred             HHHHHHHHHHHH----cCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccccCceeEEeHHHHHHH
Confidence            999999988764    369999999999998864322211  111111101000             1146799999999


Q ss_pred             HHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHHHHHHh
Q 025124          199 ALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVE  242 (257)
Q Consensus       199 ~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~~~~  242 (257)
                      ++.++....  ..| .+.. +|     ...-..++...+.+...
T Consensus       258 ~~~~l~~~~--~~~-~~~~-~~-----~~~s~~el~~~i~~~~~  292 (353)
T PLN02896        258 HIFLMEQTK--AEG-RYIC-CV-----DSYDMSELINHLSKEYP  292 (353)
T ss_pred             HHHHHhCCC--cCc-cEEe-cC-----CCCCHHHHHHHHHHhCC
Confidence            999986422  123 3433 23     12334566666666553

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.26  E-value=1.5e-10  Score=102.97  Aligned_cols=193  Identities=11%  Similarity=0.033  Sum_probs=128.8

Q ss_pred             CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Q 025124           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (257)
Q Consensus        19 ~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (257)
                      +.++.++.+|++|.+.+..++++.     ++|+|||+|+... ......+.++++..+++|+.|++++++++...-.   
T Consensus       112 ~~~v~~v~~Dl~d~~~v~~~l~~~-----~~D~ViHlAa~~~-~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv---  182 (442)
T PLN02572        112 GKEIELYVGDICDFEFLSEAFKSF-----EPDAVVHFGEQRS-APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAP---  182 (442)
T ss_pred             CCcceEEECCCCCHHHHHHHHHhC-----CCCEEEECCCccc-ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCC---
Confidence            346889999999999999888764     6999999997533 2334445666778899999999999998865421   


Q ss_pred             CCCCCCCCCceEEEEcccccccc------------------------cccchhhHHHHHHHHHHHHHHHHHhcCCCCeEE
Q 025124           99 RGQASSSSGGIIINISATLHYTA------------------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRV  154 (257)
Q Consensus        99 ~~~~~~~~~g~ii~iss~~~~~~------------------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v  154 (257)
                              ..++|++||...+..                        ..+...|+.+|.+.+.+++.++..    +|+++
T Consensus       183 --------~~~~V~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~----~gl~~  250 (442)
T PLN02572        183 --------DCHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA----WGIRA  250 (442)
T ss_pred             --------CccEEEEecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHh----cCCCE
Confidence                    236999998754321                        112347999999999999887754    46999


Q ss_pred             EEEecCcccCCCCCCCC-----------------ChHHHHHHhhhhc---------cCCCCCCHHhHHHHHHHhccCCCC
Q 025124          155 NGIAPGPIKDTAGVSKL-----------------APEEIRSKATDYM---------AAYKFGEKWDIAMAALYLASDAGK  208 (257)
Q Consensus       155 ~~v~Pg~v~t~~~~~~~-----------------~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~  208 (257)
                      ..++|+.+..|......                 ....+........         ....+.+.+|++++++.++.... 
T Consensus       251 v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~-  329 (442)
T PLN02572        251 TDLNQGVVYGVRTDETMMDEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPA-  329 (442)
T ss_pred             EEEecccccCCCCcccccccccccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChh-
Confidence            99999999987542210                 0001111111111         11256889999999999886421 


Q ss_pred             cccC--cEEEecCCcccCCCCCCcHHHHHHHHHH
Q 025124          209 YVNG--NTLIVDGGNWLSNPRDLPKEAVNQLSRA  240 (257)
Q Consensus       209 ~~~G--~~~~~dgg~~~~~~~~~~~~~~~~~~~~  240 (257)
                       ..|  ..+++.++ .     .-..++...|.+.
T Consensus       330 -~~g~~~i~Nigs~-~-----~si~el~~~i~~~  356 (442)
T PLN02572        330 -KPGEFRVFNQFTE-Q-----FSVNELAKLVTKA  356 (442)
T ss_pred             -hcCceeEEEeCCC-c-----eeHHHHHHHHHHH
Confidence             234  35666432 1     2345666677665

>PLN02214 cinnamoyl-CoA reductase

Probab=99.24  E-value=1.1e-09  Score=94.40  Aligned_cols=182  Identities=11%  Similarity=0.035  Sum_probs=123.1

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|++|.+++..+++       ++|+|||+|+...         ++++..+++|+.++.++++++.+.    + 
T Consensus        60 ~~~~~~~~Dl~d~~~~~~~~~-------~~d~Vih~A~~~~---------~~~~~~~~~nv~gt~~ll~aa~~~----~-  118 (342)
T PLN02214         60 ERLILCKADLQDYEALKAAID-------GCDGVFHTASPVT---------DDPEQMVEPAVNGAKFVINAAAEA----K-  118 (342)
T ss_pred             CcEEEEecCcCChHHHHHHHh-------cCCEEEEecCCCC---------CCHHHHHHHHHHHHHHHHHHHHhc----C-
Confidence            368889999999998887775       5899999998531         235678999999999999987642    2 


Q ss_pred             CCCCCCCCceEEEEcccccccccc---------------------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124          100 GQASSSSGGIIINISATLHYTATW---------------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~~~~---------------------~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                             -++||++||..+.++.+                     ....|+.+|.+.+.+++.++.++    |++++.++
T Consensus       119 -------v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~----g~~~v~lR  187 (342)
T PLN02214        119 -------VKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEK----GVDLVVLN  187 (342)
T ss_pred             -------CCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHHHHHHHHHHHHHHc----CCcEEEEe
Confidence                   35799999975443210                     12469999999999999887653    69999999


Q ss_pred             cCcccCCCCCCCCCh--HHHHHHhhhhcc-----CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcH
Q 025124          159 PGPIKDTAGVSKLAP--EEIRSKATDYMA-----AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPK  231 (257)
Q Consensus       159 Pg~v~t~~~~~~~~~--~~~~~~~~~~~~-----~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~  231 (257)
                      |+.+..|........  ............     ...+.+.+|+|++++.++....  . |..+++.++ .     .-..
T Consensus       188 p~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~Dva~a~~~al~~~~--~-~g~yn~~~~-~-----~~~~  258 (342)
T PLN02214        188 PVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEAPS--A-SGRYLLAES-A-----RHRG  258 (342)
T ss_pred             CCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEHHHHHHHHHHHHhCcc--c-CCcEEEecC-C-----CCHH
Confidence            999998854322111  111111111111     1246789999999999886432  2 335666443 1     1246


Q ss_pred             HHHHHHHHHHh
Q 025124          232 EAVNQLSRAVE  242 (257)
Q Consensus       232 ~~~~~~~~~~~  242 (257)
                      .+...|.+.+.
T Consensus       259 el~~~i~~~~~  269 (342)
T PLN02214        259 EVVEILAKLFP  269 (342)
T ss_pred             HHHHHHHHHCC
Confidence            66777776653

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.24  E-value=7e-10  Score=90.58  Aligned_cols=192  Identities=21%  Similarity=0.142  Sum_probs=134.1

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++++|+.|.+.+.+++.+-     .+|+++|-|+-++..    -+.++-...+++|+.|++.+..++..+..+   
T Consensus        51 ~~~~fv~~DI~D~~~v~~~~~~~-----~~D~VvhfAAESHVD----RSI~~P~~Fi~TNv~GT~~LLEaar~~~~~---  118 (340)
T COG1088          51 PRYRFVQGDICDRELVDRLFKEY-----QPDAVVHFAAESHVD----RSIDGPAPFIQTNVVGTYTLLEAARKYWGK---  118 (340)
T ss_pred             CCceEEeccccCHHHHHHHHHhc-----CCCeEEEechhcccc----ccccChhhhhhcchHHHHHHHHHHHHhccc---
Confidence            58999999999999999888764     799999999965542    244445668999999999999999887543   


Q ss_pred             CCCCCCCCceEEEEcccccc-------------cccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCC
Q 025124          100 GQASSSSGGIIINISATLHY-------------TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA  166 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~-------------~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~  166 (257)
                              -+++.||.-..+             .+..+.+.|++||++.++|++++.+-+    |+.++...+..-..|-
T Consensus       119 --------frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD~lVray~~TY----glp~~ItrcSNNYGPy  186 (340)
T COG1088         119 --------FRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASDLLVRAYVRTY----GLPATITRCSNNYGPY  186 (340)
T ss_pred             --------ceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhHHHHHHHHHHHc----CCceEEecCCCCcCCC
Confidence                    258888864321             234567889999999999999999865    5777777776665553


Q ss_pred             CCCCCChHHHHHH---------hhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHH
Q 025124          167 GVSKLAPEEIRSK---------ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQL  237 (257)
Q Consensus       167 ~~~~~~~~~~~~~---------~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~  237 (257)
                      +...-.-+.....         +.++.....+..++|-++++..++...   ..|++++++||....+     -..++.|
T Consensus       187 qfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg---~~GE~YNIgg~~E~~N-----levv~~i  258 (340)
T COG1088         187 QFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKG---KIGETYNIGGGNERTN-----LEVVKTI  258 (340)
T ss_pred             cCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcC---cCCceEEeCCCccchH-----HHHHHHH
Confidence            3221111111111         112222234678999999999999653   2399999999977652     3445555


Q ss_pred             HHHHhc
Q 025124          238 SRAVER  243 (257)
Q Consensus       238 ~~~~~~  243 (257)
                      .+...+
T Consensus       259 ~~~l~~  264 (340)
T COG1088         259 CELLGK  264 (340)
T ss_pred             HHHhCc
Confidence            555444

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.20  E-value=1.4e-09  Score=91.15  Aligned_cols=194  Identities=15%  Similarity=0.085  Sum_probs=133.3

Q ss_pred             EEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCC
Q 025124           24 GLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQAS  103 (257)
Q Consensus        24 ~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~  103 (257)
                      ++.+|++|.+++.++++       ++|+|||.|+......     ....+.++++|+.|+-++++++...    +     
T Consensus        49 ~~~~Di~d~~~l~~a~~-------g~d~V~H~Aa~~~~~~-----~~~~~~~~~vNV~GT~nvl~aa~~~----~-----  107 (280)
T PF01073_consen   49 YIQGDITDPESLEEALE-------GVDVVFHTAAPVPPWG-----DYPPEEYYKVNVDGTRNVLEAARKA----G-----  107 (280)
T ss_pred             EEEeccccHHHHHHHhc-------CCceEEEeCccccccC-----cccHHHHHHHHHHHHHHHHHHHHHc----C-----
Confidence            88999999999998886       6899999999644322     3345679999999999999988653    2     


Q ss_pred             CCCCceEEEEcccccccc---c--------------ccchhhHHHHHHHHHHHHHHHH-HhcCCCCeEEEEEecCcccCC
Q 025124          104 SSSGGIIINISATLHYTA---T--------------WYQIHVSAAKAAVDSITRSLAL-EWGTDYAIRVNGIAPGPIKDT  165 (257)
Q Consensus       104 ~~~~g~ii~iss~~~~~~---~--------------~~~~~Y~~sK~a~~~l~~~la~-e~~~~~gi~v~~v~Pg~v~t~  165 (257)
                         -.++|++||.++..+   .              .....|+.||+..+.++..... ++.....++..+|+|..|..|
T Consensus       108 ---VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp  184 (280)
T PF01073_consen  108 ---VKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGP  184 (280)
T ss_pred             ---CCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCc
Confidence               357999999986654   0              1234799999999999887665 222123589999999999977


Q ss_pred             CCCCCCChHHHHHHhhhh---------ccCCCCCCHHhHHHHHHHhcc---CC--CCcccCcEEEecCCcccCCCCCCcH
Q 025124          166 AGVSKLAPEEIRSKATDY---------MAAYKFGEKWDIAMAALYLAS---DA--GKYVNGNTLIVDGGNWLSNPRDLPK  231 (257)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~---~~--~~~~~G~~~~~dgg~~~~~~~~~~~  231 (257)
                      .......  .........         .....+.+.+++|.+.+..+.   +.  .....|+.+.+..+.    |..--+
T Consensus       185 ~d~~~~~--~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~----p~~~~~  258 (280)
T PF01073_consen  185 GDQRLVP--RLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALLEPGKPERVAGQAYFITDGE----PVPSFW  258 (280)
T ss_pred             ccccccc--hhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhccccccccCCCcEEEEECCC----ccCcHH
Confidence            5322211  111111111         111236679999998866543   22  345789998888762    222246


Q ss_pred             HHHHHHHHHHhccCCC
Q 025124          232 EAVNQLSRAVERKSRD  247 (257)
Q Consensus       232 ~~~~~~~~~~~~~~~~  247 (257)
                      .++..+.++.+.+.+.
T Consensus       259 ~f~~~~~~~~G~~~~~  274 (280)
T PF01073_consen  259 DFMRPLWEALGYPPPK  274 (280)
T ss_pred             HHHHHHHHHCCCCCCc
Confidence            7788888888887776

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02240 UDP-glucose 4-epimerase

Probab=99.19  E-value=4.7e-09  Score=90.74  Aligned_cols=197  Identities=16%  Similarity=0.079  Sum_probs=126.1

Q ss_pred             CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Q 025124           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (257)
Q Consensus        19 ~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (257)
                      +.++.++.+|++|.+++..+++..     .+|+|||+|+.....    .+.+++...+++|+.++.++++++.    +.+
T Consensus        57 ~~~~~~~~~D~~~~~~l~~~~~~~-----~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~  123 (352)
T PLN02240         57 GDNLVFHKVDLRDKEALEKVFAST-----RFDAVIHFAGLKAVG----ESVAKPLLYYDNNLVGTINLLEVMA----KHG  123 (352)
T ss_pred             CccceEEecCcCCHHHHHHHHHhC-----CCCEEEEccccCCcc----ccccCHHHHHHHHHHHHHHHHHHHH----HcC
Confidence            346788999999999998887652     799999999964321    1334567889999999999887653    222


Q ss_pred             CCCCCCCCCceEEEEcccccccc-----------cccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCC
Q 025124           99 RGQASSSSGGIIINISATLHYTA-----------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG  167 (257)
Q Consensus        99 ~~~~~~~~~g~ii~iss~~~~~~-----------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~  167 (257)
                              .+++|++||...+..           ..+...|+.+|.+.+.+++.++.+   ..++.+..++++.+..+..
T Consensus       124 --------~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~~R~~~v~G~~~  192 (352)
T PLN02240        124 --------CKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTKLFIEEICRDIHAS---DPEWKIILLRYFNPVGAHP  192 (352)
T ss_pred             --------CCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh---cCCCCEEEEeecCcCCCCc
Confidence                    357999999643321           123568999999999999988765   2357777777655543210


Q ss_pred             C------CCCChHH---HHHHhh-hh----------------ccCCCCCCHHhHHHHHHHhccCC--CCcccCcEEEecC
Q 025124          168 V------SKLAPEE---IRSKAT-DY----------------MAAYKFGEKWDIAMAALYLASDA--GKYVNGNTLIVDG  219 (257)
Q Consensus       168 ~------~~~~~~~---~~~~~~-~~----------------~~~~~~~~~~dva~~~~~l~~~~--~~~~~G~~~~~dg  219 (257)
                      .      .......   ...... ..                .....+..++|++++++.++...  .....|..+++.+
T Consensus       193 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~  272 (352)
T PLN02240        193 SGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGT  272 (352)
T ss_pred             cccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccC
Confidence            0      0000011   111111 10                11123577999999988777432  1123467888887


Q ss_pred             CcccCCCCCCcHHHHHHHHHHHhcc
Q 025124          220 GNWLSNPRDLPKEAVNQLSRAVERK  244 (257)
Q Consensus       220 g~~~~~~~~~~~~~~~~~~~~~~~~  244 (257)
                      |..+.     .+++.+.+.+....+
T Consensus       273 ~~~~s-----~~el~~~i~~~~g~~  292 (352)
T PLN02240        273 GKGTS-----VLEMVAAFEKASGKK  292 (352)
T ss_pred             CCcEe-----HHHHHHHHHHHhCCC
Confidence            75544     567777777777543

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.18  E-value=3.1e-09  Score=91.64  Aligned_cols=194  Identities=14%  Similarity=0.073  Sum_probs=120.6

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|++|.+++.++++..     ++|+|||+|+......    ..+.-...+++|+.|+.++++++.+.-.++  
T Consensus        55 ~~~~~~~~Dl~d~~~l~~~~~~~-----~~d~ViH~Aa~~~~~~----~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~--  123 (343)
T TIGR01472        55 ARMKLHYGDLTDSSNLRRIIDEI-----KPTEIYNLAAQSHVKV----SFEIPEYTADVDGIGTLRLLEAVRTLGLIK--  123 (343)
T ss_pred             cceeEEEeccCCHHHHHHHHHhC-----CCCEEEECCcccccch----hhhChHHHHHHHHHHHHHHHHHHHHhCCCc--
Confidence            45889999999999998888864     5899999999654321    112224577889999999999987642111  


Q ss_pred             CCCCCCCCceEEEEccccccc-----------ccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCC
Q 025124          100 GQASSSSGGIIINISATLHYT-----------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  168 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~-----------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~  168 (257)
                             ..++|++||...+.           +..+...|+.||.+.+.+++.++.+++    +.+....+..+..|...
T Consensus       124 -------~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~----~~~~~~~~~~~~gp~~~  192 (343)
T TIGR01472       124 -------SVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAKLYAHWITVNYREAYG----LFAVNGILFNHESPRRG  192 (343)
T ss_pred             -------CeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHhC----CceEEEeecccCCCCCC
Confidence                   23699999864332           112456899999999999999988753    32222222122222111


Q ss_pred             CCCCh---HHHHHHhh----------hhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHH
Q 025124          169 SKLAP---EEIRSKAT----------DYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVN  235 (257)
Q Consensus       169 ~~~~~---~~~~~~~~----------~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~  235 (257)
                      .....   ........          +......+.+.+|++++++.++....    +..+++.+|..+.     ..++.+
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~~~~~~----~~~yni~~g~~~s-----~~e~~~  263 (343)
T TIGR01472       193 ENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWLMLQQDK----PDDYVIATGETHS-----VREFVE  263 (343)
T ss_pred             ccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHHHHhcCC----CccEEecCCCcee-----HHHHHH
Confidence            01110   11111111          11223457899999999998886431    3468888775433     566677


Q ss_pred             HHHHHHhcc
Q 025124          236 QLSRAVERK  244 (257)
Q Consensus       236 ~~~~~~~~~  244 (257)
                      .+.+...++
T Consensus       264 ~i~~~~g~~  272 (343)
T TIGR01472       264 VSFEYIGKT  272 (343)
T ss_pred             HHHHHcCCC
Confidence            777666644

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02583 cinnamoyl-CoA reductase

Probab=99.18  E-value=2.7e-09  Score=90.25  Aligned_cols=156  Identities=8%  Similarity=-0.056  Sum_probs=107.7

Q ss_pred             CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Q 025124           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (257)
Q Consensus        19 ~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (257)
                      +.++.++.+|++|.+++.+++.       .+|+++|.++....     .. .+++.++++|+.|++++++++.+.+   .
T Consensus        56 ~~~~~~~~~Dl~d~~~~~~~l~-------~~d~v~~~~~~~~~-----~~-~~~~~~~~~nv~gt~~ll~aa~~~~---~  119 (297)
T PLN02583         56 EERLKVFDVDPLDYHSILDALK-------GCSGLFCCFDPPSD-----YP-SYDEKMVDVEVRAAHNVLEACAQTD---T  119 (297)
T ss_pred             CCceEEEEecCCCHHHHHHHHc-------CCCEEEEeCccCCc-----cc-ccHHHHHHHHHHHHHHHHHHHHhcC---C
Confidence            4568889999999998876553       68999987653221     11 2457899999999999999987653   1


Q ss_pred             CCCCCCCCCceEEEEccccccccc-c-------------c--------chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEE
Q 025124           99 RGQASSSSGGIIINISATLHYTAT-W-------------Y--------QIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (257)
Q Consensus        99 ~~~~~~~~~g~ii~iss~~~~~~~-~-------------~--------~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~  156 (257)
                              .++||++||.++.... .             .        ...|+.||...+.+++.++.+    +|+++++
T Consensus       120 --------v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~----~gi~~v~  187 (297)
T PLN02583        120 --------IEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD----RGVNMVS  187 (297)
T ss_pred             --------ccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH----hCCcEEE
Confidence                    3579999998664211 0             0        015999999999999888754    3799999


Q ss_pred             EecCcccCCCCCCCCChHHHHHHhhhhc--cCCCCCCHHhHHHHHHHhccC
Q 025124          157 IAPGPIKDTAGVSKLAPEEIRSKATDYM--AAYKFGEKWDIAMAALYLASD  205 (257)
Q Consensus       157 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~dva~~~~~l~~~  205 (257)
                      |+|+.+..|......   ..........  ....+.+++|+|++++..+..
T Consensus       188 lrp~~v~Gp~~~~~~---~~~~~~~~~~~~~~~~~v~V~Dva~a~~~al~~  235 (297)
T PLN02583        188 INAGLLMGPSLTQHN---PYLKGAAQMYENGVLVTVDVNFLVDAHIRAFED  235 (297)
T ss_pred             EcCCcccCCCCCCch---hhhcCCcccCcccCcceEEHHHHHHHHHHHhcC
Confidence            999999987543211   0111000000  112367899999999999964

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.17  E-value=4.4e-09  Score=90.42  Aligned_cols=196  Identities=14%  Similarity=0.048  Sum_probs=124.9

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|++|.+++..+++.     .++|+|||+|+......    ..+.....+++|+.++.++++++.    +.+ 
T Consensus        50 ~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~vvh~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~-  115 (338)
T PRK10675         50 KHPTFVEGDIRNEALLTEILHD-----HAIDTVIHFAGLKAVGE----SVQKPLEYYDNNVNGTLRLISAMR----AAN-  115 (338)
T ss_pred             CCceEEEccCCCHHHHHHHHhc-----CCCCEEEECCccccccc----hhhCHHHHHHHHHHHHHHHHHHHH----HcC-
Confidence            4577889999999998887763     37999999999654321    122345678899999999887653    333 


Q ss_pred             CCCCCCCCceEEEEccccccccc------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCC
Q 025124          100 GQASSSSGGIIINISATLHYTAT------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG  167 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~~~------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~  167 (257)
                             .+++|++||...+...            .....|+.+|.+.+.+++.++++..   ++++..++++.+..+..
T Consensus       116 -------~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~---~~~~~ilR~~~v~g~~~  185 (338)
T PRK10675        116 -------VKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQP---DWSIALLRYFNPVGAHP  185 (338)
T ss_pred             -------CCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcC---CCcEEEEEeeeecCCCc
Confidence                   4579999997543211            2357899999999999999876532   57777777665554311


Q ss_pred             C------CCCChHH----HHHHhhhh----------------ccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          168 V------SKLAPEE----IRSKATDY----------------MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       168 ~------~~~~~~~----~~~~~~~~----------------~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                      .      .......    ........                .....+.+.+|++++++.++........|+.+++.+|.
T Consensus       186 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~  265 (338)
T PRK10675        186 SGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGV  265 (338)
T ss_pred             ccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCC
Confidence            0      0000111    11111110                01124678999999998887542222335788887775


Q ss_pred             ccCCCCCCcHHHHHHHHHHHhcc
Q 025124          222 WLSNPRDLPKEAVNQLSRAVERK  244 (257)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~  244 (257)
                      .+.     ..++.+.+.+....+
T Consensus       266 ~~s-----~~e~~~~i~~~~g~~  283 (338)
T PRK10675        266 GSS-----VLDVVNAFSKACGKP  283 (338)
T ss_pred             cee-----HHHHHHHHHHHhCCC
Confidence            443     466677777777654

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.16  E-value=3.7e-09  Score=90.07  Aligned_cols=196  Identities=16%  Similarity=0.037  Sum_probs=128.1

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      ++.++.+|+++.+++..++..     +++|++||+||......    ..++....++.|+.++..+++++.+    .+  
T Consensus        48 ~~~~~~~D~~~~~~~~~~~~~-----~~~d~vv~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~--  112 (328)
T TIGR01179        48 RVTFVEGDLRDRELLDRLFEE-----HKIDAVIHFAGLIAVGE----SVQDPLKYYRNNVVNTLNLLEAMQQ----TG--  112 (328)
T ss_pred             ceEEEECCCCCHHHHHHHHHh-----CCCcEEEECccccCcch----hhcCchhhhhhhHHHHHHHHHHHHh----cC--
Confidence            577889999999999888763     47999999999653322    2233456788999999999887543    22  


Q ss_pred             CCCCCCCceEEEEccccccccc-----------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCC
Q 025124          101 QASSSSGGIIINISATLHYTAT-----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS  169 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~~~-----------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~  169 (257)
                            .+++|++||...+...           .+...|+.+|.+.+.+++.++.+   ..++++..++|+.+..+....
T Consensus       113 ------~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~~~~~---~~~~~~~ilR~~~v~g~~~~~  183 (328)
T TIGR01179       113 ------VKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERILRDLSKA---DPGLSYVILRYFNVAGADPEG  183 (328)
T ss_pred             ------CCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHHHHHHHHh---ccCCCEEEEecCcccCCCCCC
Confidence                  3579999886543211           13367999999999999998765   247899999998887653211


Q ss_pred             C-----CChHHH----HHHhhhh----------cc------CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          170 K-----LAPEEI----RSKATDY----------MA------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       170 ~-----~~~~~~----~~~~~~~----------~~------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      .     ......    .......          .+      ...+...+|++++++.++........|+.+++.++..+.
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s  263 (328)
T TIGR01179       184 TIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQGFS  263 (328)
T ss_pred             ccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCccc
Confidence            0     001111    1111100          01      113577899999999888643222346777776654433


Q ss_pred             CCCCCcHHHHHHHHHHHhccC
Q 025124          225 NPRDLPKEAVNQLSRAVERKS  245 (257)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~  245 (257)
                           ..++.+.+.+.++++.
T Consensus       264 -----~~ei~~~~~~~~g~~~  279 (328)
T TIGR01179       264 -----VLEVIEAFKKVSGVDF  279 (328)
T ss_pred             -----HHHHHHHHHHHhCCCc
Confidence                 5667777777776554

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.16  E-value=3.4e-09  Score=79.10  Aligned_cols=174  Identities=19%  Similarity=0.105  Sum_probs=129.8

Q ss_pred             EEccCCCHHHHHHHHHHHHHHhC--CccEEEeCCCCCCCCCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCC
Q 025124           25 LEGDVRKREDAVRVVESTINHFG--KLDILVNAAAGNFLVPAE-DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ  101 (257)
Q Consensus        25 ~~~Dls~~~~~~~~~~~~~~~~g--~id~li~~ag~~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  101 (257)
                      +..|-+-.++-+.+++++-+.++  ++|.++.-||.+..+.-. ..-.+.-+.+++-.++..-+-.+.+..+++.     
T Consensus        47 V~~~~swtEQe~~v~~~vg~sL~gekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~-----  121 (236)
T KOG4022|consen   47 VDGNKSWTEQEQSVLEQVGSSLQGEKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKP-----  121 (236)
T ss_pred             ecCCcchhHHHHHHHHHHHHhhcccccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCC-----
Confidence            34444445566777888877664  799999999977655432 1122334556777777777777777777765     


Q ss_pred             CCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEecCcccCCCCCCCCChHHHHHHh
Q 025124          102 ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA  180 (257)
Q Consensus       102 ~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~  180 (257)
                           +|.+-..+.-.++.+.|+...|+++|+|+..|+++|+.+-. -+.|--+..|.|-.++|||....+...++    
T Consensus       122 -----GGLL~LtGAkaAl~gTPgMIGYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~ADf----  192 (236)
T KOG4022|consen  122 -----GGLLQLTGAKAALGGTPGMIGYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNADF----  192 (236)
T ss_pred             -----CceeeecccccccCCCCcccchhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCCcc----
Confidence                 56777778888899999999999999999999999998854 35677888999999999998777654332    


Q ss_pred             hhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEec
Q 025124          181 TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVD  218 (257)
Q Consensus       181 ~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~d  218 (257)
                            ..+...+.+++..+....+..+.-+|..+.+.
T Consensus       193 ------ssWTPL~fi~e~flkWtt~~~RPssGsLlqi~  224 (236)
T KOG4022|consen  193 ------SSWTPLSFISEHFLKWTTETSRPSSGSLLQIT  224 (236)
T ss_pred             ------cCcccHHHHHHHHHHHhccCCCCCCCceEEEE
Confidence                  34556788999999988888777788777664

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.14  E-value=6.6e-09  Score=87.03  Aligned_cols=192  Identities=13%  Similarity=0.047  Sum_probs=131.3

Q ss_pred             CCcHHHHHH--HHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            2 GRRKTVLRS--AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         2 ~r~~~~l~~--~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      .|+++...+  ....+...+.+...+.+|++|+++++.+++       ++|+|+|.|........   +  .-.++++..
T Consensus        37 VR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~-------gcdgVfH~Asp~~~~~~---~--~e~~li~pa  104 (327)
T KOG1502|consen   37 VRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID-------GCDGVFHTASPVDFDLE---D--PEKELIDPA  104 (327)
T ss_pred             EcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh-------CCCEEEEeCccCCCCCC---C--cHHhhhhHH
Confidence            466666333  355566556679999999999999999987       68999999985543221   1  123689999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccccc-cc-----------c----------hhhHHHHHHHHH
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-WY-----------Q----------IHVSAAKAAVDS  137 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~-~~-----------~----------~~Y~~sK~a~~~  137 (257)
                      +.|+.++.+++...-   .        =.+||++||.++.... +.           |          .-|+.+|...+.
T Consensus       105 v~Gt~nVL~ac~~~~---s--------VkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y~~sK~lAEk  173 (327)
T KOG1502|consen  105 VKGTKNVLEACKKTK---S--------VKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWYALSKTLAEK  173 (327)
T ss_pred             HHHHHHHHHHHhccC---C--------cceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHHHHHHHHHHH
Confidence            999999999986542   0        2569999999988654 11           1          137788876666


Q ss_pred             HHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCCh--HHHHHHhhhhcc-----CCCCCCHHhHHHHHHHhccCCCCcc
Q 025124          138 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP--EEIRSKATDYMA-----AYKFGEKWDIAMAALYLASDAGKYV  210 (257)
Q Consensus       138 l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~-----~~~~~~~~dva~~~~~l~~~~~~~~  210 (257)
                      -+..++.|    +|+..++|.|+.|..|.+......  ............     ...+.+.+|||.+.+.++..+.  .
T Consensus       174 aAw~fa~e----~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrDVA~AHv~a~E~~~--a  247 (327)
T KOG1502|consen  174 AAWEFAKE----NGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRDVALAHVLALEKPS--A  247 (327)
T ss_pred             HHHHHHHh----CCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHHHHHHHHHHHcCcc--c
Confidence            66666654    479999999999998877664332  122222222111     1125789999999999997554  3


Q ss_pred             cCcEEEecCCcc
Q 025124          211 NGNTLIVDGGNW  222 (257)
Q Consensus       211 ~G~~~~~dgg~~  222 (257)
                      .|+.+.+.....
T Consensus       248 ~GRyic~~~~~~  259 (327)
T KOG1502|consen  248 KGRYICVGEVVS  259 (327)
T ss_pred             CceEEEecCccc
Confidence            477777765433

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.13  E-value=5.3e-09  Score=89.25  Aligned_cols=187  Identities=14%  Similarity=0.064  Sum_probs=121.1

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|++|.+++..+++       ++|+|||+|+..... .    .+..+..+++|+.++.++++++....   + 
T Consensus        55 ~~~~~~~~Dl~~~~~~~~~~~-------~~d~Vih~A~~~~~~-~----~~~~~~~~~~nv~gt~~ll~a~~~~~---~-  118 (322)
T PLN02662         55 ERLHLFKANLLEEGSFDSVVD-------GCEGVFHTASPFYHD-V----TDPQAELIDPAVKGTLNVLRSCAKVP---S-  118 (322)
T ss_pred             CceEEEeccccCcchHHHHHc-------CCCEEEEeCCcccCC-C----CChHHHHHHHHHHHHHHHHHHHHhCC---C-
Confidence            468889999999988777765       589999999854211 1    11224688999999999999876431   1 


Q ss_pred             CCCCCCCCceEEEEcccccc-cc-c---------------cc-----chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEE
Q 025124          100 GQASSSSGGIIINISATLHY-TA-T---------------WY-----QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~-~~-~---------------~~-----~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v  157 (257)
                             -.+||++||.++. ++ .               +.     ...|+.+|.+.+.+++.+..+    +|++++.+
T Consensus       119 -------~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~~l  187 (322)
T PLN02662        119 -------VKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKE----NGIDMVTI  187 (322)
T ss_pred             -------CCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHH----cCCcEEEE
Confidence                   3579999997642 11 1               10     146999999999998887654    36999999


Q ss_pred             ecCcccCCCCCCCC--ChHHHHHHhhhh----ccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcH
Q 025124          158 APGPIKDTAGVSKL--APEEIRSKATDY----MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPK  231 (257)
Q Consensus       158 ~Pg~v~t~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~  231 (257)
                      +|+.+.+|......  ............    .....+.+++|++++++.++....  ..| .+++.| ..     .-.+
T Consensus       188 Rp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~--~~~-~~~~~g-~~-----~s~~  258 (322)
T PLN02662        188 NPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNASYRWVDVRDVANAHIQAFEIPS--ASG-RYCLVE-RV-----VHYS  258 (322)
T ss_pred             eCCcccCCCCCCCCCchHHHHHHHhcCCccCCCCCcCeEEHHHHHHHHHHHhcCcC--cCC-cEEEeC-CC-----CCHH
Confidence            99999988643211  111111111111    112357899999999999886532  234 345533 22     2345


Q ss_pred             HHHHHHHHHHh
Q 025124          232 EAVNQLSRAVE  242 (257)
Q Consensus       232 ~~~~~~~~~~~  242 (257)
                      ++.+.+.+...
T Consensus       259 e~~~~i~~~~~  269 (322)
T PLN02662        259 EVVKILHELYP  269 (322)
T ss_pred             HHHHHHHHHCC
Confidence            66666666544

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.12  E-value=1.2e-08  Score=88.19  Aligned_cols=175  Identities=15%  Similarity=0.082  Sum_probs=110.7

Q ss_pred             CCeEEEEccCCCHHH-H-HHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Q 025124           20 IPAIGLEGDVRKRED-A-VRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG   97 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~-~-~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~   97 (257)
                      .++.++.+|++++.- + ......+   ...+|++||+|+.....       ..++...++|+.++..+++.+..    .
T Consensus        61 ~~v~~~~~D~~~~~~gl~~~~~~~~---~~~~d~vih~a~~~~~~-------~~~~~~~~~nv~g~~~ll~~a~~----~  126 (367)
T TIGR01746        61 ERIEVVAGDLSEPRLGLSDAEWERL---AENVDTIVHNGALVNWV-------YPYSELRAANVLGTREVLRLAAS----G  126 (367)
T ss_pred             CCEEEEeCCcCcccCCcCHHHHHHH---HhhCCEEEeCCcEeccC-------CcHHHHhhhhhHHHHHHHHHHhh----C
Confidence            468899999986531 0 1111222   24799999999954321       12456778999999988887653    2


Q ss_pred             CCCCCCCCCCceEEEEccccccccc----------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           98 GRGQASSSSGGIIINISATLHYTAT----------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        98 ~~~~~~~~~~g~ii~iss~~~~~~~----------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      .        ..+++++||.......                .....|+.+|.+.+.+++.+.     ..|++++.++||.
T Consensus       127 ~--------~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-----~~g~~~~i~Rpg~  193 (367)
T TIGR01746       127 R--------AKPLHYVSTISVLAAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREAS-----DRGLPVTIVRPGR  193 (367)
T ss_pred             C--------CceEEEEccccccCCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHH-----hcCCCEEEECCCc
Confidence            2        3459999998655331                113469999999999887654     3379999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhh------hhcc-----CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          162 IKDTAGVSKLAPEEIRSKAT------DYMA-----AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~------~~~~-----~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                      +..+................      ...+     ...+...+|++++++.++.......+|..+++.++.
T Consensus       194 v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~  264 (367)
T TIGR01746       194 ILGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPE  264 (367)
T ss_pred             eeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCC
Confidence            98752221111112111110      1111     122678899999999998755433447888888753

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.09  E-value=7e-10  Score=91.88  Aligned_cols=206  Identities=16%  Similarity=0.120  Sum_probs=134.7

Q ss_pred             CCCcHHHHHHHHHHHHhc--CCCe----EEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSL--GIPA----IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRT   74 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~--~~~~----~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~   74 (257)
                      ++|++.++-.+..++.+.  +.++    ..+.+|+.|.+.++.++++.     ++|+++|.|+.-+.. +.+.   ...+
T Consensus        29 ~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~-----~pdiVfHaAA~KhVp-l~E~---~p~e   99 (293)
T PF02719_consen   29 FDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY-----KPDIVFHAAALKHVP-LMED---NPFE   99 (293)
T ss_dssp             EES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT-------T-SEEEE------HH-HHCC---CHHH
T ss_pred             eCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc-----CCCEEEEChhcCCCC-hHHh---CHHH
Confidence            368888999999998643  2234    34689999999999988754     899999999964432 2222   3356


Q ss_pred             HHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEE
Q 025124           75 VIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRV  154 (257)
Q Consensus        75 ~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v  154 (257)
                      .+++|+.|+.++++++..+-.            .++|+||+--+..|   ...|+++|...+.++.+.+.... ..+.++
T Consensus       100 av~tNv~GT~nv~~aa~~~~v------------~~~v~ISTDKAv~P---tnvmGatKrlaE~l~~~~~~~~~-~~~t~f  163 (293)
T PF02719_consen  100 AVKTNVLGTQNVAEAAIEHGV------------ERFVFISTDKAVNP---TNVMGATKRLAEKLVQAANQYSG-NSDTKF  163 (293)
T ss_dssp             HHHHHCHHHHHHHHHHHHTT-------------SEEEEEEECGCSS-----SHHHHHHHHHHHHHHHHCCTSS-SS--EE
T ss_pred             HHHHHHHHHHHHHHHHHHcCC------------CEEEEccccccCCC---CcHHHHHHHHHHHHHHHHhhhCC-CCCcEE
Confidence            899999999999999987532            45999999777654   47899999999999999998876 667999


Q ss_pred             EEEecCcccCCCCCCCCChHHHHHHhhhhccC--------CCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCC
Q 025124          155 NGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA--------YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNP  226 (257)
Q Consensus       155 ~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~  226 (257)
                      .+|+.|.|...   ....-+-+.++....-|.        +-+++++|.++.++..+.-.   ..|..+..+.|..+.  
T Consensus       164 ~~VRFGNVlgS---~GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~~~~---~~geifvl~mg~~v~--  235 (293)
T PF02719_consen  164 SSVRFGNVLGS---RGSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAAALA---KGGEIFVLDMGEPVK--  235 (293)
T ss_dssp             EEEEE-EETTG---TTSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHHHHH-----TTEEEEE---TCEE--
T ss_pred             EEEEecceecC---CCcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHHHhhC---CCCcEEEecCCCCcC--
Confidence            99999999632   222234455555555443        23578999999988887532   358899999875543  


Q ss_pred             CCCcHHHHHHHHHHHh
Q 025124          227 RDLPKEAVNQLSRAVE  242 (257)
Q Consensus       227 ~~~~~~~~~~~~~~~~  242 (257)
                         ..++...|-+..+
T Consensus       236 ---I~dlA~~~i~~~g  248 (293)
T PF02719_consen  236 ---ILDLAEAMIELSG  248 (293)
T ss_dssp             ---CCCHHHHHHHHTT
T ss_pred             ---HHHHHHHHHhhcc
Confidence               4556666666554

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.08  E-value=9.2e-09  Score=88.51  Aligned_cols=158  Identities=15%  Similarity=0.068  Sum_probs=108.6

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      ++.++.+|++|.+++..++.       ++|+|||+|+...   ..  ..+.+...+++|+.++.++++++.+..   +  
T Consensus        60 ~~~~~~~Dl~d~~~~~~~~~-------~~d~vih~A~~~~---~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~---~--  122 (338)
T PLN00198         60 DLKIFGADLTDEESFEAPIA-------GCDLVFHVATPVN---FA--SEDPENDMIKPAIQGVHNVLKACAKAK---S--  122 (338)
T ss_pred             ceEEEEcCCCChHHHHHHHh-------cCCEEEEeCCCCc---cC--CCChHHHHHHHHHHHHHHHHHHHHhcC---C--
Confidence            57889999999988877664       5899999998432   11  123345678999999999999986531   1  


Q ss_pred             CCCCCCCceEEEEccccccccc------------------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEE
Q 025124          101 QASSSSGGIIINISATLHYTAT------------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~~~------------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~  156 (257)
                            .++||++||...+...                        ++...|+.||.+.+.+++.++.+    +|++++.
T Consensus       123 ------~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~~~  192 (338)
T PLN00198        123 ------VKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEE----NNIDLIT  192 (338)
T ss_pred             ------ccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHh----cCceEEE
Confidence                  3579999997654311                        12446999999999999988764    3699999


Q ss_pred             EecCcccCCCCCCCCCh--HHHHHHhh---------hhcc----CCCCCCHHhHHHHHHHhccC
Q 025124          157 IAPGPIKDTAGVSKLAP--EEIRSKAT---------DYMA----AYKFGEKWDIAMAALYLASD  205 (257)
Q Consensus       157 v~Pg~v~t~~~~~~~~~--~~~~~~~~---------~~~~----~~~~~~~~dva~~~~~l~~~  205 (257)
                      ++|+.+..|........  ........         ...+    ...+.+++|++++++.++..
T Consensus       193 ~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~  256 (338)
T PLN00198        193 VIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVEDVCRAHIFLAEK  256 (338)
T ss_pred             EeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeEHHHHHHHHHHHhhC
Confidence            99999998753211110  00011000         0011    13578999999999998865

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.07  E-value=1.2e-08  Score=88.27  Aligned_cols=190  Identities=14%  Similarity=0.039  Sum_probs=125.3

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      ++.++.+|+.|.+.+..+++       .+|+|||.|+......    ..++....+++|+.|+.++.+++..    .+  
T Consensus        70 ~~~~~~~Di~d~~~l~~~~~-------~~d~ViHlAa~~~~~~----~~~~~~~~~~~Nv~gt~nll~~~~~----~~--  132 (348)
T PRK15181         70 RFIFIQGDIRKFTDCQKACK-------NVDYVLHQAALGSVPR----SLKDPIATNSANIDGFLNMLTAARD----AH--  132 (348)
T ss_pred             ceEEEEccCCCHHHHHHHhh-------CCCEEEECccccCchh----hhhCHHHHHHHHHHHHHHHHHHHHH----cC--
Confidence            57789999999888776664       5899999999643211    1223345789999999999988743    22  


Q ss_pred             CCCCCCCceEEEEccccccccc-----------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCC
Q 025124          101 QASSSSGGIIINISATLHYTAT-----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS  169 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~~~-----------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~  169 (257)
                            -.++|++||...+...           .+...|+.+|.+.+.+++.++.+    +|+++..++|+.+..|....
T Consensus       133 ------~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~----~~~~~~~lR~~~vyGp~~~~  202 (348)
T PRK15181        133 ------VSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARS----YEFNAIGLRYFNVFGRRQNP  202 (348)
T ss_pred             ------CCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHH----hCCCEEEEEecceeCcCCCC
Confidence                  3479999987543211           13357999999999998887654    36999999999998875321


Q ss_pred             C----CChHHHHHHhhhhcc---------CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHH
Q 025124          170 K----LAPEEIRSKATDYMA---------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQ  236 (257)
Q Consensus       170 ~----~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~  236 (257)
                      .    ..-..+........+         ...+.+.+|++++++.++........|..+++.+|..+.     ..++.+.
T Consensus       203 ~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~~s-----~~e~~~~  277 (348)
T PRK15181        203 NGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDRTS-----LNELYYL  277 (348)
T ss_pred             CCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcccccCCCCEEEecCCCcEe-----HHHHHHH
Confidence            1    111122221111111         124578999999998766432222357889998775433     5667777


Q ss_pred             HHHHHh
Q 025124          237 LSRAVE  242 (257)
Q Consensus       237 ~~~~~~  242 (257)
                      +.+...
T Consensus       278 i~~~~~  283 (348)
T PRK15181        278 IRDGLN  283 (348)
T ss_pred             HHHHhC
Confidence            766664

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.07  E-value=2.7e-08  Score=88.21  Aligned_cols=205  Identities=17%  Similarity=0.136  Sum_probs=153.6

Q ss_pred             CCcHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      +|++-++..+..+++..  ..++.++-+|+.|.+.+..+++..     ++|+++|.|+.-+. |+.|..+   .+.+++|
T Consensus       282 ~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~-----kvd~VfHAAA~KHV-Pl~E~nP---~Eai~tN  352 (588)
T COG1086         282 SRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH-----KVDIVFHAAALKHV-PLVEYNP---EEAIKTN  352 (588)
T ss_pred             cCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC-----CCceEEEhhhhccC-cchhcCH---HHHHHHh
Confidence            67888888888899876  467889999999999999999854     79999999996443 3333333   4588999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.|+.++.+++...-.            .++|++|+--+..|.   ..|+++|...+.++++++.... ..+-++.+|+-
T Consensus       353 V~GT~nv~~aa~~~~V------------~~~V~iSTDKAV~Pt---NvmGaTKr~aE~~~~a~~~~~~-~~~T~f~~VRF  416 (588)
T COG1086         353 VLGTENVAEAAIKNGV------------KKFVLISTDKAVNPT---NVMGATKRLAEKLFQAANRNVS-GTGTRFCVVRF  416 (588)
T ss_pred             hHhHHHHHHHHHHhCC------------CEEEEEecCcccCCc---hHhhHHHHHHHHHHHHHhhccC-CCCcEEEEEEe
Confidence            9999999999977543            349999998777664   6789999999999999998766 45789999999


Q ss_pred             CcccCCCCCCCCChHHHHHHhhhhccC--------CCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcH
Q 025124          160 GPIKDTAGVSKLAPEEIRSKATDYMAA--------YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPK  231 (257)
Q Consensus       160 g~v~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~  231 (257)
                      |.|...   +...-+-+.++..++-|.        .-|++-+|.++.++.....   .-.|.++..|.|-.+.     ..
T Consensus       417 GNVlGS---rGSViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LVlqA~a~---~~gGeifvldMGepvk-----I~  485 (588)
T COG1086         417 GNVLGS---RGSVIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLVLQAGAI---AKGGEIFVLDMGEPVK-----II  485 (588)
T ss_pred             cceecC---CCCCHHHHHHHHHcCCCccccCCCceeEEEEHHHHHHHHHHHHhh---cCCCcEEEEcCCCCeE-----HH
Confidence            999643   222223344444444332        2356778888888877754   2468999999875444     67


Q ss_pred             HHHHHHHHHHh
Q 025124          232 EAVNQLSRAVE  242 (257)
Q Consensus       232 ~~~~~~~~~~~  242 (257)
                      ++.++|-+..+
T Consensus       486 dLAk~mi~l~g  496 (588)
T COG1086         486 DLAKAMIELAG  496 (588)
T ss_pred             HHHHHHHHHhC
Confidence            77777766665

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.07  E-value=2.2e-08  Score=85.52  Aligned_cols=186  Identities=18%  Similarity=0.135  Sum_probs=122.5

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      .+.++.+|++|.++++.+++       ++|++||+++....      ..++.+..+++|+.++..+++++...    +  
T Consensus        44 ~~~~~~~D~~~~~~l~~~~~-------~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~--  104 (328)
T TIGR03466        44 DVEIVEGDLRDPASLRKAVA-------GCRALFHVAADYRL------WAPDPEEMYAANVEGTRNLLRAALEA----G--  104 (328)
T ss_pred             CceEEEeeCCCHHHHHHHHh-------CCCEEEEeceeccc------CCCCHHHHHHHHHHHHHHHHHHHHHh----C--
Confidence            46788999999988877765       68999999985321      12235678899999999998887542    2  


Q ss_pred             CCCCCCCceEEEEcccccccccc---------------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCC
Q 025124          101 QASSSSGGIIINISATLHYTATW---------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT  165 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~~~~---------------~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~  165 (257)
                            -+++|++||...+.+..               ....|+.+|.+.+.+++.++.+    +|+++..++|+.+..+
T Consensus       105 ------~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~ilR~~~~~G~  174 (328)
T TIGR03466       105 ------VERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAE----KGLPVVIVNPSTPIGP  174 (328)
T ss_pred             ------CCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHHHHHHh----cCCCEEEEeCCccCCC
Confidence                  35799999976543211               1347999999999999988754    3689999999999876


Q ss_pred             CCCCCCChHHH-HHHhhhhcc-----CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHHHH
Q 025124          166 AGVSKLAPEEI-RSKATDYMA-----AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSR  239 (257)
Q Consensus       166 ~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~  239 (257)
                      ........... ........+     ...+.+.+|+++++..++...   ..|..+.+. |..+     -..++.+.|.+
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~---~~~~~~~~~-~~~~-----s~~e~~~~i~~  245 (328)
T TIGR03466       175 RDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLLALERG---RIGERYILG-GENL-----TLKQILDKLAE  245 (328)
T ss_pred             CCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHHHHhCC---CCCceEEec-CCCc-----CHHHHHHHHHH
Confidence            43222111111 111111111     123568999999999888642   357777664 3222     24566666666


Q ss_pred             HHhcc
Q 025124          240 AVERK  244 (257)
Q Consensus       240 ~~~~~  244 (257)
                      ...++
T Consensus       246 ~~g~~  250 (328)
T TIGR03466       246 ITGRP  250 (328)
T ss_pred             HhCCC
Confidence            66654

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.07  E-value=2.2e-08  Score=85.06  Aligned_cols=188  Identities=13%  Similarity=0.047  Sum_probs=120.6

Q ss_pred             EEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCC
Q 025124           25 LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASS  104 (257)
Q Consensus        25 ~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~  104 (257)
                      +..|+++.+.++.+.+.   .+.++|+|||+|+....      ..++.+..+++|+.++.++++++...           
T Consensus        46 ~~~d~~~~~~~~~~~~~---~~~~~D~vvh~A~~~~~------~~~~~~~~~~~n~~~~~~ll~~~~~~-----------  105 (314)
T TIGR02197        46 IADYIDKEDFLDRLEKG---AFGKIEAIFHQGACSDT------TETDGEYMMENNYQYSKRLLDWCAEK-----------  105 (314)
T ss_pred             eeccCcchhHHHHHHhh---ccCCCCEEEECccccCc------cccchHHHHHHHHHHHHHHHHHHHHh-----------
Confidence            45666666555544432   34689999999996421      22345678899999999999887542           


Q ss_pred             CCCceEEEEcccccccc-----------cccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCC-
Q 025124          105 SSGGIIINISATLHYTA-----------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-  172 (257)
Q Consensus       105 ~~~g~ii~iss~~~~~~-----------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~-  172 (257)
                        +.++|++||...+..           ..+...|+.+|.+.+.+++....+.  ..++++..++|+.+..+....... 
T Consensus       106 --~~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~~lR~~~vyG~~~~~~~~~  181 (314)
T TIGR02197       106 --GIPFIYASSAATYGDGEAGFREGRELERPLNVYGYSKFLFDQYVRRRVLPE--ALSAQVVGLRYFNVYGPREYHKGKM  181 (314)
T ss_pred             --CCcEEEEccHHhcCCCCCCcccccCcCCCCCHHHHHHHHHHHHHHHHhHhh--ccCCceEEEEEeeccCCCCCCCCCc
Confidence              236999999754321           1145679999999999998644332  235788889998888765321110 


Q ss_pred             h---HHHHHHhhhhc---------------cCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHH
Q 025124          173 P---EEIRSKATDYM---------------AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAV  234 (257)
Q Consensus       173 ~---~~~~~~~~~~~---------------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~  234 (257)
                      .   ...........               ....+...+|+++++..++..    ..+..+++.++..+.     .+++.
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~----~~~~~yni~~~~~~s-----~~e~~  252 (314)
T TIGR02197       182 ASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLLEN----GVSGIFNLGTGRARS-----FNDLA  252 (314)
T ss_pred             ccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHHhc----ccCceEEcCCCCCcc-----HHHHH
Confidence            0   11111111110               112467899999999999965    235688887764443     56778


Q ss_pred             HHHHHHHhccC
Q 025124          235 NQLSRAVERKS  245 (257)
Q Consensus       235 ~~~~~~~~~~~  245 (257)
                      +.|.+.+..+.
T Consensus       253 ~~i~~~~g~~~  263 (314)
T TIGR02197       253 DAVFKALGKDE  263 (314)
T ss_pred             HHHHHHhCCCC
Confidence            88888777543

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN02686 cinnamoyl-CoA reductase

Probab=99.01  E-value=4.7e-08  Score=85.13  Aligned_cols=191  Identities=8%  Similarity=-0.007  Sum_probs=118.2

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      .+.++.+|++|.+++.++++       .+|.++|.++..........    .....++|+.+..++++++...   .+  
T Consensus       108 ~~~~v~~Dl~d~~~l~~~i~-------~~d~V~hlA~~~~~~~~~~~----~~~~~~~nv~gt~~llea~~~~---~~--  171 (367)
T PLN02686        108 GIWTVMANLTEPESLHEAFD-------GCAGVFHTSAFVDPAGLSGY----TKSMAELEAKASENVIEACVRT---ES--  171 (367)
T ss_pred             ceEEEEcCCCCHHHHHHHHH-------hccEEEecCeeecccccccc----cchhhhhhHHHHHHHHHHHHhc---CC--
Confidence            57889999999999888776       46899998886533221111    1234567888888888876532   11  


Q ss_pred             CCCCCCCceEEEEccccc-ccc----c------------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEE
Q 025124          101 QASSSSGGIIINISATLH-YTA----T------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~-~~~----~------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v  157 (257)
                            -.++|++||..+ .++    .                  .+...|+.+|.+.+.+++.++.+    +|++++++
T Consensus       172 ------v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~gl~~v~l  241 (367)
T PLN02686        172 ------VRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG----KGLKLATI  241 (367)
T ss_pred             ------ccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh----cCceEEEE
Confidence                  246999999631 111    0                  01236999999999999988764    47999999


Q ss_pred             ecCcccCCCCCCCCChHHHHHHhhhhc---c--CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHH
Q 025124          158 APGPIKDTAGVSKLAPEEIRSKATDYM---A--AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKE  232 (257)
Q Consensus       158 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~  232 (257)
                      +|+.+..|....... ...........   .  ...+.+.+|++++++.++........|..+ +..|..     .-...
T Consensus       242 Rp~~vyGp~~~~~~~-~~~~~~~~g~~~~~g~g~~~~v~V~Dva~A~~~al~~~~~~~~~~~y-i~~g~~-----~s~~e  314 (367)
T PLN02686        242 CPALVTGPGFFRRNS-TATIAYLKGAQEMLADGLLATADVERLAEAHVCVYEAMGNKTAFGRY-ICFDHV-----VSRED  314 (367)
T ss_pred             cCCceECCCCCCCCC-hhHHHHhcCCCccCCCCCcCeEEHHHHHHHHHHHHhccCCCCCCCcE-EEeCCC-----ccHHH
Confidence            999999886432211 11111111111   1  113678999999999888532111234445 333322     22456


Q ss_pred             HHHHHHHHHhcc
Q 025124          233 AVNQLSRAVERK  244 (257)
Q Consensus       233 ~~~~~~~~~~~~  244 (257)
                      .+..|.+....+
T Consensus       315 ~~~~i~~~~g~~  326 (367)
T PLN02686        315 EAEELARQIGLP  326 (367)
T ss_pred             HHHHHHHHcCCC
Confidence            677777766543

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=98.97  E-value=2.4e-07  Score=78.68  Aligned_cols=185  Identities=11%  Similarity=0.052  Sum_probs=115.5

Q ss_pred             ccCCCHHHHHHHHHHHHH--HhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCC
Q 025124           27 GDVRKREDAVRVVESTIN--HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASS  104 (257)
Q Consensus        27 ~Dls~~~~~~~~~~~~~~--~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~  104 (257)
                      +|+.|..+.+.+++.+.+  .++++|+|||+|+......   ...   +..++.|+.++.++++++..    .       
T Consensus        45 ~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~---~~~---~~~~~~n~~~t~~ll~~~~~----~-------  107 (308)
T PRK11150         45 LDIADYMDKEDFLAQIMAGDDFGDIEAIFHEGACSSTTE---WDG---KYMMDNNYQYSKELLHYCLE----R-------  107 (308)
T ss_pred             hhhhhhhhHHHHHHHHhcccccCCccEEEECceecCCcC---CCh---HHHHHHHHHHHHHHHHHHHH----c-------
Confidence            455555444444444432  2357999999998543221   122   34689999999999888753    2       


Q ss_pred             CCCceEEEEcccccccc-----------cccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCC-C
Q 025124          105 SSGGIIINISATLHYTA-----------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-A  172 (257)
Q Consensus       105 ~~~g~ii~iss~~~~~~-----------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~-~  172 (257)
                        +.++|++||...+..           ..+...|+.+|.+.+.+++.+..+    .++.+..++|+.+..+...... .
T Consensus       108 --~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~~~lR~~~vyG~~~~~~~~~  181 (308)
T PRK11150        108 --EIPFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLFDEYVRQILPE----ANSQICGFRYFNVYGPREGHKGSM  181 (308)
T ss_pred             --CCcEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHHHH----cCCCEEEEeeeeecCCCCCCCCcc
Confidence              235999999754321           113357999999999998887654    3688999999999876432211 1


Q ss_pred             h---HHHHHHhhhhc-c---------CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHHHH
Q 025124          173 P---EEIRSKATDYM-A---------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSR  239 (257)
Q Consensus       173 ~---~~~~~~~~~~~-~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~  239 (257)
                      .   ..+........ +         ...+...+|++++++.++...    .+..+++.+|..+.     ..++.+.|.+
T Consensus       182 ~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~~----~~~~yni~~~~~~s-----~~el~~~i~~  252 (308)
T PRK11150        182 ASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWENG----VSGIFNCGTGRAES-----FQAVADAVLA  252 (308)
T ss_pred             chhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhcC----CCCeEEcCCCCcee-----HHHHHHHHHH
Confidence            1   01111111111 0         123578999999998888642    24588887775433     4677777777


Q ss_pred             HHhc
Q 025124          240 AVER  243 (257)
Q Consensus       240 ~~~~  243 (257)
                      ....
T Consensus       253 ~~~~  256 (308)
T PRK11150        253 YHKK  256 (308)
T ss_pred             HhCC
Confidence            6653

>PLN02427 UDP-apiose/xylose synthase

Probab=98.96  E-value=1.5e-08  Score=88.76  Aligned_cols=189  Identities=12%  Similarity=0.054  Sum_probs=120.8

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      ++.++.+|++|.+.+..++.       .+|+|||.|+......... .+   ...+..|+.+...+++++...       
T Consensus        66 ~~~~~~~Dl~d~~~l~~~~~-------~~d~ViHlAa~~~~~~~~~-~~---~~~~~~n~~gt~~ll~aa~~~-------  127 (386)
T PLN02427         66 RIQFHRINIKHDSRLEGLIK-------MADLTINLAAICTPADYNT-RP---LDTIYSNFIDALPVVKYCSEN-------  127 (386)
T ss_pred             CeEEEEcCCCChHHHHHHhh-------cCCEEEEcccccChhhhhh-Ch---HHHHHHHHHHHHHHHHHHHhc-------
Confidence            58899999999988877664       4799999999654322111 11   234567999998888776432       


Q ss_pred             CCCCCCCceEEEEccccccccc---------c------------------------cchhhHHHHHHHHHHHHHHHHHhc
Q 025124          101 QASSSSGGIIINISATLHYTAT---------W------------------------YQIHVSAAKAAVDSITRSLALEWG  147 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~~~---------~------------------------~~~~Y~~sK~a~~~l~~~la~e~~  147 (257)
                            ..++|++||...+...         +                        ....|+.+|.+.+.+++.++.   
T Consensus       128 ------~~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---  198 (386)
T PLN02427        128 ------NKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGA---  198 (386)
T ss_pred             ------CCEEEEEeeeeeeCCCcCCCCCcccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHh---
Confidence                  2469999996533210         0                        113699999999999987764   


Q ss_pred             CCCCeEEEEEecCcccCCCCCCC--------CChH---HHHHHhhhhcc---------CCCCCCHHhHHHHHHHhccCCC
Q 025124          148 TDYAIRVNGIAPGPIKDTAGVSK--------LAPE---EIRSKATDYMA---------AYKFGEKWDIAMAALYLASDAG  207 (257)
Q Consensus       148 ~~~gi~v~~v~Pg~v~t~~~~~~--------~~~~---~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~  207 (257)
                       .+|+++..++|+.+..|.....        ....   ..........+         ...+.+.+|++++++.++....
T Consensus       199 -~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~  277 (386)
T PLN02427        199 -ENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPA  277 (386)
T ss_pred             -hcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCcc
Confidence             3479999999999998753210        0000   01111111111         1246889999999999886431


Q ss_pred             CcccCcEEEecCC-cccCCCCCCcHHHHHHHHHHHhc
Q 025124          208 KYVNGNTLIVDGG-NWLSNPRDLPKEAVNQLSRAVER  243 (257)
Q Consensus       208 ~~~~G~~~~~dgg-~~~~~~~~~~~~~~~~~~~~~~~  243 (257)
                       ...|..+++.+| ..+.     ..++...+.+.+.+
T Consensus       278 -~~~g~~yni~~~~~~~s-----~~el~~~i~~~~g~  308 (386)
T PLN02427        278 -RANGHIFNVGNPNNEVT-----VRQLAEMMTEVYAK  308 (386)
T ss_pred             -cccCceEEeCCCCCCcc-----HHHHHHHHHHHhcc
Confidence             235778888765 2332     45667777666653

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=98.96  E-value=1.5e-07  Score=79.68  Aligned_cols=203  Identities=15%  Similarity=0.068  Sum_probs=128.0

Q ss_pred             HHHHHHHHhcCCCeE----EEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHH
Q 025124            9 RSAVAALHSLGIPAI----GLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF   84 (257)
Q Consensus         9 ~~~~~~l~~~~~~~~----~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~   84 (257)
                      ..+++.|.+.|..+.    ...+|+++.++++.+++..     ++|+|||+|+........   .+.-...+++|+.++.
T Consensus        11 ~~l~~~L~~~g~~v~~~~~~~~~Dl~~~~~l~~~~~~~-----~~d~Vih~A~~~~~~~~~---~~~~~~~~~~n~~~~~   82 (306)
T PLN02725         11 SAIVRKLEALGFTNLVLRTHKELDLTRQADVEAFFAKE-----KPTYVILAAAKVGGIHAN---MTYPADFIRENLQIQT   82 (306)
T ss_pred             HHHHHHHHhCCCcEEEeeccccCCCCCHHHHHHHHhcc-----CCCEEEEeeeeecccchh---hhCcHHHHHHHhHHHH
Confidence            345666666665443    2368999999888877652     689999999964321111   1122346788999988


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccccc-------------c--c-chhhHHHHHHHHHHHHHHHHHhcC
Q 025124           85 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-------------W--Y-QIHVSAAKAAVDSITRSLALEWGT  148 (257)
Q Consensus        85 ~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~-------------~--~-~~~Y~~sK~a~~~l~~~la~e~~~  148 (257)
                      .+++++...    +        -+++|++||...+.+.             +  . ...|+.+|.+.+.+++.+..+.  
T Consensus        83 ~ll~~~~~~----~--------~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~--  148 (306)
T PLN02725         83 NVIDAAYRH----G--------VKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQAYRIQY--  148 (306)
T ss_pred             HHHHHHHHc----C--------CCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHHHHHHHHHh--
Confidence            888887542    2        3579999986543211             1  1 2249999999999888876543  


Q ss_pred             CCCeEEEEEecCcccCCCCCCC----CChHHHHHHh----h----------hhccCCCCCCHHhHHHHHHHhccCCCCcc
Q 025124          149 DYAIRVNGIAPGPIKDTAGVSK----LAPEEIRSKA----T----------DYMAAYKFGEKWDIAMAALYLASDAGKYV  210 (257)
Q Consensus       149 ~~gi~v~~v~Pg~v~t~~~~~~----~~~~~~~~~~----~----------~~~~~~~~~~~~dva~~~~~l~~~~~~~~  210 (257)
                        ++++..++|+.+..+.....    ..-......+    .          .......+...+|++++++.++....   
T Consensus       149 --~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~~~---  223 (306)
T PLN02725        149 --GWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMRRYS---  223 (306)
T ss_pred             --CCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHHhccc---
Confidence              68999999999987743211    0001111111    0          11112357889999999999986431   


Q ss_pred             cCcEEEecCCcccCCCCCCcHHHHHHHHHHHhc
Q 025124          211 NGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVER  243 (257)
Q Consensus       211 ~G~~~~~dgg~~~~~~~~~~~~~~~~~~~~~~~  243 (257)
                      .+..+++.+|..+.     ..++.+.+.+.+..
T Consensus       224 ~~~~~ni~~~~~~s-----~~e~~~~i~~~~~~  251 (306)
T PLN02725        224 GAEHVNVGSGDEVT-----IKELAELVKEVVGF  251 (306)
T ss_pred             cCcceEeCCCCccc-----HHHHHHHHHHHhCC
Confidence            23456776664443     56777777777654

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=98.95  E-value=2.6e-07  Score=77.47  Aligned_cols=201  Identities=14%  Similarity=0.051  Sum_probs=128.6

Q ss_pred             HHHHHHHHHhcCCCeEEE---EccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHH
Q 025124            8 LRSAVAALHSLGIPAIGL---EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF   84 (257)
Q Consensus         8 l~~~~~~l~~~~~~~~~~---~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~   84 (257)
                      ...+++.|.+.|.++..+   .+|+.+.++++.+++..     ++|++||+++......    .....+..+++|+.++.
T Consensus        12 G~~l~~~l~~~g~~v~~~~r~~~d~~~~~~~~~~~~~~-----~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~   82 (287)
T TIGR01214        12 GRELVQQLSPEGRVVVALTSSQLDLTDPEALERLLRAI-----RPDAVVNTAAYTDVDG----AESDPEKAFAVNALAPQ   82 (287)
T ss_pred             HHHHHHHHHhcCCEEEEeCCcccCCCCHHHHHHHHHhC-----CCCEEEECCccccccc----cccCHHHHHHHHHHHHH
Confidence            345677777777666543   47999999988887643     6899999999643211    12234567889999999


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccc-----------cccchhhHHHHHHHHHHHHHHHHHhcCCCCeE
Q 025124           85 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-----------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIR  153 (257)
Q Consensus        85 ~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~-----------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~  153 (257)
                      .+.+++..    .         +.++|++||...+.+           ......|+.+|.+.+.+++.+        +.+
T Consensus        83 ~l~~~~~~----~---------~~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~--------~~~  141 (287)
T TIGR01214        83 NLARAAAR----H---------GARLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAIRAA--------GPN  141 (287)
T ss_pred             HHHHHHHH----c---------CCeEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHh--------CCC
Confidence            99888643    2         246999998653321           113457999999988888754        246


Q ss_pred             EEEEecCcccCCCCCCCCChHHHHHHhhhhcc-------CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCC
Q 025124          154 VNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA-------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNP  226 (257)
Q Consensus       154 v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~  226 (257)
                      +..++|+.+..+.....+. ...........+       ...+.+.+|+++++..++....  ..+..+++.++..+.  
T Consensus       142 ~~ilR~~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~--~~~~~~ni~~~~~~s--  216 (287)
T TIGR01214       142 ALIVRTSWLYGGGGGRNFV-RTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQRLA--RARGVYHLANSGQCS--  216 (287)
T ss_pred             eEEEEeeecccCCCCCCHH-HHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHhhcc--CCCCeEEEECCCCcC--
Confidence            7889999998765211111 111111111111       1234678999999999986431  124567776544333  


Q ss_pred             CCCcHHHHHHHHHHHhccCC
Q 025124          227 RDLPKEAVNQLSRAVERKSR  246 (257)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~  246 (257)
                         ..++.+.+.++...+..
T Consensus       217 ---~~e~~~~i~~~~~~~~~  233 (287)
T TIGR01214       217 ---WYEFAQAIFEEAGADGL  233 (287)
T ss_pred             ---HHHHHHHHHHHhCcccc
Confidence               56777777777776543

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=98.94  E-value=6.3e-08  Score=79.83  Aligned_cols=164  Identities=12%  Similarity=0.023  Sum_probs=97.4

Q ss_pred             CCeEEEEccCCCH-HHHHHHHHHHHHHh-CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Q 025124           20 IPAIGLEGDVRKR-EDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG   97 (257)
Q Consensus        20 ~~~~~~~~Dls~~-~~~~~~~~~~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~   97 (257)
                      .++.++.+|+++. +.+       .+.+ .++|++|+++|......  .  .    ..+++|..+...+++++.    +.
T Consensus        62 ~~~~~~~~Dl~d~~~~l-------~~~~~~~~d~vi~~~g~~~~~~--~--~----~~~~~n~~~~~~ll~a~~----~~  122 (251)
T PLN00141         62 PSLQIVRADVTEGSDKL-------VEAIGDDSDAVICATGFRRSFD--P--F----APWKVDNFGTVNLVEACR----KA  122 (251)
T ss_pred             CceEEEEeeCCCCHHHH-------HHHhhcCCCEEEECCCCCcCCC--C--C----CceeeehHHHHHHHHHHH----Hc
Confidence            4688899999983 222       2223 37999999998642211  1  1    124678888888888763    33


Q ss_pred             CCCCCCCCCCceEEEEccccccc---ccccchhhHHHHHHHHHHHHHHHHH--hcCCCCeEEEEEecCcccCCCCCCCCC
Q 025124           98 GRGQASSSSGGIIINISATLHYT---ATWYQIHVSAAKAAVDSITRSLALE--WGTDYAIRVNGIAPGPIKDTAGVSKLA  172 (257)
Q Consensus        98 ~~~~~~~~~~g~ii~iss~~~~~---~~~~~~~Y~~sK~a~~~l~~~la~e--~~~~~gi~v~~v~Pg~v~t~~~~~~~~  172 (257)
                      +        .++||++||.+.+.   +.+....|...+.+...+...+..|  +. ..|++++.|+||++.+++......
T Consensus       123 ~--------~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~-~~gi~~~iirpg~~~~~~~~~~~~  193 (251)
T PLN00141        123 G--------VTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIR-KSGINYTIVRPGGLTNDPPTGNIV  193 (251)
T ss_pred             C--------CCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHH-hcCCcEEEEECCCccCCCCCceEE
Confidence            3        57899999986432   2223345666565444433333333  34 678999999999998764321110


Q ss_pred             hHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecC
Q 025124          173 PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDG  219 (257)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dg  219 (257)
                      .      .........+++++|+|+.+..++.....  .+..+.+-+
T Consensus       194 ~------~~~~~~~~~~i~~~dvA~~~~~~~~~~~~--~~~~~~~~~  232 (251)
T PLN00141        194 M------EPEDTLYEGSISRDQVAEVAVEALLCPES--SYKVVEIVA  232 (251)
T ss_pred             E------CCCCccccCcccHHHHHHHHHHHhcChhh--cCcEEEEec
Confidence            0      00001112368999999999999865332  244444443

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=98.92  E-value=5.2e-08  Score=79.14  Aligned_cols=170  Identities=19%  Similarity=0.151  Sum_probs=120.3

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      ++.++.+|++|.+.++.+++..     .+|.+||.|+....    ....+.....++.|+.+...+++++...    +  
T Consensus        43 ~~~~~~~dl~~~~~~~~~~~~~-----~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~----~--  107 (236)
T PF01370_consen   43 NVEFVIGDLTDKEQLEKLLEKA-----NIDVVIHLAAFSSN----PESFEDPEEIIEANVQGTRNLLEAAREA----G--  107 (236)
T ss_dssp             TEEEEESETTSHHHHHHHHHHH-----TESEEEEEBSSSSH----HHHHHSHHHHHHHHHHHHHHHHHHHHHH----T--
T ss_pred             eEEEEEeecccccccccccccc-----CceEEEEeeccccc----cccccccccccccccccccccccccccc----c--
Confidence            6788999999999999999876     79999999996431    1122455677888888888888777643    2  


Q ss_pred             CCCCCCCceEEEEccccccccc-----------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCC---
Q 025124          101 QASSSSGGIIINISATLHYTAT-----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA---  166 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~~~-----------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~---  166 (257)
                            ..++|++||...+...           .....|+.+|...+.+.+.+..+.    ++++..++|+.+..+.   
T Consensus       108 ------~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~~~----~~~~~~~R~~~vyG~~~~~  177 (236)
T PF01370_consen  108 ------VKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLRDYAKKY----GLRVTILRPPNVYGPGNPN  177 (236)
T ss_dssp             ------TSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHHHHHHH----TSEEEEEEESEEESTTSSS
T ss_pred             ------ccccccccccccccccccccccccccccccccccccccccccccccccccc----ccccccccccccccccccc
Confidence                  3479999996543222           134569999999999999988764    6999999999999887   


Q ss_pred             CCCCCChHHHHHHhhhhcc---------CCCCCCHHhHHHHHHHhccCCCCcccCcEEEe
Q 025124          167 GVSKLAPEEIRSKATDYMA---------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIV  217 (257)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~  217 (257)
                      ......-..+........+         ...+...+|++++++.++....  ..|+.+++
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~yNi  235 (236)
T PF01370_consen  178 NNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPK--AAGGIYNI  235 (236)
T ss_dssp             SSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSC--TTTEEEEE
T ss_pred             cccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCC--CCCCEEEe
Confidence            1222112233333332221         1234678999999999998654  56777775

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=98.89  E-value=1.1e-07  Score=89.11  Aligned_cols=194  Identities=11%  Similarity=0.019  Sum_probs=127.3

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|++|.+.+..++..     .++|+|||+|+......    ..++....+++|+.++..+.+++...   .. 
T Consensus        57 ~~v~~~~~Dl~d~~~~~~~~~~-----~~~D~ViHlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~-  123 (668)
T PLN02260         57 PNFKFVKGDIASADLVNYLLIT-----EGIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKVT---GQ-  123 (668)
T ss_pred             CCeEEEECCCCChHHHHHHHhh-----cCCCEEEECCCccCchh----hhhCHHHHHHHHHHHHHHHHHHHHhc---CC-
Confidence            4688899999998887665432     37999999999654321    12223457789999999998876432   11 


Q ss_pred             CCCCCCCCceEEEEcccccccc--------------cccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCC
Q 025124          100 GQASSSSGGIIINISATLHYTA--------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT  165 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~~--------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~  165 (257)
                             -.++|++||...+..              ..+...|+.+|.+.+.+++.+..++    ++.+..++|+.+..+
T Consensus       124 -------vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~----~l~~vilR~~~VyGp  192 (668)
T PLN02260        124 -------IRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY----GLPVITTRGNNVYGP  192 (668)
T ss_pred             -------CcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHHHHHHHHHHHHHHHHc----CCCEEEECcccccCc
Confidence                   257999999754321              1123579999999999999887653    688999999999877


Q ss_pred             CCCCCCChHHHHHHhhhhc---------cCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHH
Q 025124          166 AGVSKLAPEEIRSKATDYM---------AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQ  236 (257)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~  236 (257)
                      .......-..+........         ....+...+|+++++..++...   ..|..+++.++..+.     ..++.+.
T Consensus       193 ~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~~---~~~~vyni~~~~~~s-----~~el~~~  264 (668)
T PLN02260        193 NQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKG---EVGHVYNIGTKKERR-----VIDVAKD  264 (668)
T ss_pred             CCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhcC---CCCCEEEECCCCeeE-----HHHHHHH
Confidence            5432111111111111111         1123578999999999888532   246788887764433     4577777


Q ss_pred             HHHHHhccC
Q 025124          237 LSRAVERKS  245 (257)
Q Consensus       237 ~~~~~~~~~  245 (257)
                      |.+....+.
T Consensus       265 i~~~~g~~~  273 (668)
T PLN02260        265 ICKLFGLDP  273 (668)
T ss_pred             HHHHhCCCC
Confidence            877776543

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=98.87  E-value=3e-07  Score=79.46  Aligned_cols=190  Identities=16%  Similarity=0.095  Sum_probs=120.7

Q ss_pred             CeEEEEccCC-CHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           21 PAIGLEGDVR-KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        21 ~~~~~~~Dls-~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .+.++.+|++ +.+.+..+++       ++|+|||.|+...+...    .++-+..+++|+.+..++.+++...      
T Consensus        47 ~~~~~~~Dl~~~~~~~~~~~~-------~~d~ViH~aa~~~~~~~----~~~p~~~~~~n~~~~~~ll~aa~~~------  109 (347)
T PRK11908         47 RMHFFEGDITINKEWIEYHVK-------KCDVILPLVAIATPATY----VKQPLRVFELDFEANLPIVRSAVKY------  109 (347)
T ss_pred             CeEEEeCCCCCCHHHHHHHHc-------CCCEEEECcccCChHHh----hcCcHHHHHHHHHHHHHHHHHHHhc------
Confidence            5888899998 5665544433       68999999996543221    1222456789999999888876532      


Q ss_pred             CCCCCCCCceEEEEccccccccc------------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124          100 GQASSSSGGIIINISATLHYTAT------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~~~------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                             +.++|++||...+...                  .+...|+.+|.+.+.+++.++.+    +|+.+..++|+.
T Consensus       110 -------~~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~----~~~~~~ilR~~~  178 (347)
T PRK11908        110 -------GKHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQLMDRVIWAYGME----EGLNFTLFRPFN  178 (347)
T ss_pred             -------CCeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHHHHHHHHHHHHHH----cCCCeEEEeeee
Confidence                   2469999997533210                  01226999999999999988754    368888899988


Q ss_pred             ccCCCCCCCC----Ch----HHHHHHhhhh---------ccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCC-ccc
Q 025124          162 IKDTAGVSKL----AP----EEIRSKATDY---------MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG-NWL  223 (257)
Q Consensus       162 v~t~~~~~~~----~~----~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg-~~~  223 (257)
                      +..|......    ..    ......+...         .....+...+|++++++.++........|+.+++.++ ..+
T Consensus       179 v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~~~~~  258 (347)
T PRK11908        179 WIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNPKNNH  258 (347)
T ss_pred             eeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHHHHHhCccccCCCCeEEeCCCCCCc
Confidence            8876532110    00    1111111111         1122478999999999998865332245788888764 223


Q ss_pred             CCCCCCcHHHHHHHHHHHhc
Q 025124          224 SNPRDLPKEAVNQLSRAVER  243 (257)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~  243 (257)
                      .     ...+.+.|....++
T Consensus       259 s-----~~e~~~~i~~~~~~  273 (347)
T PRK11908        259 S-----VRELANKMLELAAE  273 (347)
T ss_pred             C-----HHHHHHHHHHHhcC
Confidence            3     46667777666554

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=98.80  E-value=2.1e-07  Score=77.47  Aligned_cols=139  Identities=15%  Similarity=0.088  Sum_probs=112.9

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhC--------------CccEEEeCCCCC-CCCCCCCCCHHHHHHHHHHHhHHHH
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFG--------------KLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTF   84 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g--------------~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~   84 (257)
                      ..+.....|..++.++...+.++.+.+.              .+..||...... ..+++..++.+.|...++.++..++
T Consensus        50 ~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~  129 (299)
T PF08643_consen   50 PDIRPLWLDDSDPSSIHASLSRFASLLSRPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPI  129 (299)
T ss_pred             CCCCCcccCCCCCcchHHHHHHHHHHhcCCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHH
Confidence            4577778888888888888888777665              356677666633 4588999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCceEEEEc-ccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccc
Q 025124           85 IMCHEALKYLKKGGRGQASSSSGGIIINIS-ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK  163 (257)
Q Consensus        85 ~l~~~~~~~~~~~~~~~~~~~~~g~ii~is-s~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~  163 (257)
                      .+++.++|+++.+..      .+.+||.+. |.......|+.+.-.....++.+|+++|++|+. +.+|.|..++.|.++
T Consensus       130 ~~~q~lLPlL~~~~~------~~~~iil~~Psi~ssl~~PfhspE~~~~~al~~~~~~LrrEl~-~~~I~V~~i~LG~l~  202 (299)
T PF08643_consen  130 LTIQGLLPLLRSRSN------QKSKIILFNPSISSSLNPPFHSPESIVSSALSSFFTSLRRELR-PHNIDVTQIKLGNLD  202 (299)
T ss_pred             HHHHHHHHHHHhccC------CCceEEEEeCchhhccCCCccCHHHHHHHHHHHHHHHHHHHhh-hcCCceEEEEeeeec
Confidence            999999999998320      035555554 666777788888899999999999999999999 899999999999887


Q ss_pred             CC
Q 025124          164 DT  165 (257)
Q Consensus       164 t~  165 (257)
                      -.
T Consensus       203 i~  204 (299)
T PF08643_consen  203 IG  204 (299)
T ss_pred             cc
Confidence            54

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=98.77  E-value=9.2e-07  Score=77.15  Aligned_cols=187  Identities=16%  Similarity=0.056  Sum_probs=118.5

Q ss_pred             eEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCC
Q 025124           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ  101 (257)
Q Consensus        22 ~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  101 (257)
                      ..++.+|+++.+.+..++.       ++|+|||.|+......+.+..   ....+..|+.++.++++++...    +   
T Consensus        66 ~~~~~~Dl~d~~~~~~~~~-------~~D~Vih~Aa~~~~~~~~~~~---~~~~~~~N~~~t~nll~aa~~~----~---  128 (370)
T PLN02695         66 HEFHLVDLRVMENCLKVTK-------GVDHVFNLAADMGGMGFIQSN---HSVIMYNNTMISFNMLEAARIN----G---  128 (370)
T ss_pred             ceEEECCCCCHHHHHHHHh-------CCCEEEEcccccCCccccccC---chhhHHHHHHHHHHHHHHHHHh----C---
Confidence            3566789988877665543       589999999854322221111   2345678999999888876432    2   


Q ss_pred             CCCCCCceEEEEccccccc-----------------ccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccC
Q 025124          102 ASSSSGGIIINISATLHYT-----------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD  164 (257)
Q Consensus       102 ~~~~~~g~ii~iss~~~~~-----------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t  164 (257)
                           -.++|++||...+.                 +..+...|+.+|.+.+.+++.++..    .|+++..++|+.+..
T Consensus       129 -----vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~----~g~~~~ilR~~~vyG  199 (370)
T PLN02695        129 -----VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKD----FGIECRIGRFHNIYG  199 (370)
T ss_pred             -----CCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHH----hCCCEEEEEECCccC
Confidence                 35799999864321                 1223458999999999999987654    369999999999998


Q ss_pred             CCCCCC----CChHHHHHHhhh---hc-------cCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCc
Q 025124          165 TAGVSK----LAPEEIRSKATD---YM-------AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLP  230 (257)
Q Consensus       165 ~~~~~~----~~~~~~~~~~~~---~~-------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~  230 (257)
                      |.....    .....+......   ..       ....+...+|++++++.++...    .+..+++.+|..+.     .
T Consensus       200 p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~~~----~~~~~nv~~~~~~s-----~  270 (370)
T PLN02695        200 PFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS-----M  270 (370)
T ss_pred             CCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHhcc----CCCceEecCCCcee-----H
Confidence            743211    111222221111   11       1123578999999999887542    25678887764433     4


Q ss_pred             HHHHHHHHHHHhc
Q 025124          231 KEAVNQLSRAVER  243 (257)
Q Consensus       231 ~~~~~~~~~~~~~  243 (257)
                      ..+.+.+.+....
T Consensus       271 ~el~~~i~~~~g~  283 (370)
T PLN02695        271 NEMAEIALSFENK  283 (370)
T ss_pred             HHHHHHHHHHhCC
Confidence            5566666665554

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=98.77  E-value=1.6e-07  Score=87.85  Aligned_cols=190  Identities=15%  Similarity=0.082  Sum_probs=121.9

Q ss_pred             CeEEEEccCCCHHH-HHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           21 PAIGLEGDVRKRED-AVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        21 ~~~~~~~Dls~~~~-~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      ++.++.+|++|..+ ++.++       .++|+|||.|+........    +..+..+++|+.++..+.+++...      
T Consensus       361 ~~~~~~gDl~d~~~~l~~~l-------~~~D~ViHlAa~~~~~~~~----~~~~~~~~~Nv~~t~~ll~a~~~~------  423 (660)
T PRK08125        361 RFHFVEGDISIHSEWIEYHI-------KKCDVVLPLVAIATPIEYT----RNPLRVFELDFEENLKIIRYCVKY------  423 (660)
T ss_pred             ceEEEeccccCcHHHHHHHh-------cCCCEEEECccccCchhhc----cCHHHHHHhhHHHHHHHHHHHHhc------
Confidence            57788999998655 33333       2689999999965432211    122457889999999998887643      


Q ss_pred             CCCCCCCCceEEEEccccccccc---------------c---cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124          100 GQASSSSGGIIINISATLHYTAT---------------W---YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~~~---------------~---~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                             +.++|++||...+...               +   ....|+.+|.+.+.+++.++.+    +|+++..++|+.
T Consensus       424 -------~~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~----~g~~~~ilR~~~  492 (660)
T PRK08125        424 -------NKRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEK----EGLRFTLFRPFN  492 (660)
T ss_pred             -------CCeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHHHHHHHHHHHHHh----cCCceEEEEEce
Confidence                   2359999996433210               0   1236999999999999988754    368999999999


Q ss_pred             ccCCCCCCC----CC----hHHHHHHhhhh---------ccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc-cc
Q 025124          162 IKDTAGVSK----LA----PEEIRSKATDY---------MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN-WL  223 (257)
Q Consensus       162 v~t~~~~~~----~~----~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~-~~  223 (257)
                      +..|.....    ..    -..+.......         .....+.+.+|++++++.++........|+.+++.+|. .+
T Consensus       493 vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~~~~  572 (660)
T PRK08125        493 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPDNEA  572 (660)
T ss_pred             eeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCCCce
Confidence            987743210    00    01111111111         11234678999999999888643222457888888763 23


Q ss_pred             CCCCCCcHHHHHHHHHHHhc
Q 025124          224 SNPRDLPKEAVNQLSRAVER  243 (257)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~  243 (257)
                      .     ..++.+.|.+....
T Consensus       573 s-----~~el~~~i~~~~g~  587 (660)
T PRK08125        573 S-----IRELAEMLLASFEK  587 (660)
T ss_pred             e-----HHHHHHHHHHHhcc
Confidence            2     45667777776654

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=98.73  E-value=3.9e-06  Score=69.42  Aligned_cols=196  Identities=15%  Similarity=0.058  Sum_probs=120.6

Q ss_pred             HHHHHHHHHHHhcCCCeEEE---EccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHH
Q 025124            6 TVLRSAVAALHSLGIPAIGL---EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG   82 (257)
Q Consensus         6 ~~l~~~~~~l~~~~~~~~~~---~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~   82 (257)
                      +-..++.+.+. .+.++...   .+|++|.+.+.+++.+.     ++|+|||+|+......    -..+-+..+.+|..|
T Consensus        11 qLG~~L~~~l~-~~~~v~a~~~~~~Ditd~~~v~~~i~~~-----~PDvVIn~AAyt~vD~----aE~~~e~A~~vNa~~   80 (281)
T COG1091          11 QLGTELRRALP-GEFEVIATDRAELDITDPDAVLEVIRET-----RPDVVINAAAYTAVDK----AESEPELAFAVNATG   80 (281)
T ss_pred             hHHHHHHHHhC-CCceEEeccCccccccChHHHHHHHHhh-----CCCEEEECcccccccc----ccCCHHHHHHhHHHH
Confidence            33444544444 22334332   47999999999999987     8999999999765432    233346789999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccccc-----------ccchhhHHHHHHHHHHHHHHHHHhcCCCC
Q 025124           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-----------WYQIHVSAAKAAVDSITRSLALEWGTDYA  151 (257)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~-----------~~~~~Y~~sK~a~~~l~~~la~e~~~~~g  151 (257)
                      +.++.+++...             +..+|++|+-....|.           .+...|+.||.+.+..++.....      
T Consensus        81 ~~~lA~aa~~~-------------ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~~~~------  141 (281)
T COG1091          81 AENLARAAAEV-------------GARLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAAGPR------  141 (281)
T ss_pred             HHHHHHHHHHh-------------CCeEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHhCCC------
Confidence            99999998654             5679999975433222           24568999999999988865422      


Q ss_pred             eEEEEEecCcccCCCCCCCCChHHHHHHhhhhcc-------CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          152 IRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA-------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       152 i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                        ...++..|+...-.  ......+.........       .+...+.+|+|+++..++.....   +.++.+.+--.. 
T Consensus       142 --~~I~Rtswv~g~~g--~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~~---~~~yH~~~~g~~-  213 (281)
T COG1091         142 --HLILRTSWVYGEYG--NNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKEKE---GGVYHLVNSGEC-  213 (281)
T ss_pred             --EEEEEeeeeecCCC--CCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhcccc---CcEEEEeCCCcc-
Confidence              23333444443311  1111222222222211       23456789999999999965432   224444432221 


Q ss_pred             CCCCCcHHHHHHHHHHHh
Q 025124          225 NPRDLPKEAVNQLSRAVE  242 (257)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~  242 (257)
                          =|..+.+.|.+...
T Consensus       214 ----Swydfa~~I~~~~~  227 (281)
T COG1091         214 ----SWYEFAKAIFEEAG  227 (281)
T ss_pred             ----cHHHHHHHHHHHhC
Confidence                24566777766654

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=98.73  E-value=4.6e-07  Score=79.58  Aligned_cols=180  Identities=18%  Similarity=0.092  Sum_probs=115.0

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|++|.+++..+++..   .+++|+||||++.....     .    ...+++|+.+..++++++.    +.+ 
T Consensus       111 ~~v~~v~~Dl~d~~~l~~~~~~~---~~~~D~Vi~~aa~~~~~-----~----~~~~~vn~~~~~~ll~aa~----~~g-  173 (390)
T PLN02657        111 PGAEVVFGDVTDADSLRKVLFSE---GDPVDVVVSCLASRTGG-----V----KDSWKIDYQATKNSLDAGR----EVG-  173 (390)
T ss_pred             CCceEEEeeCCCHHHHHHHHHHh---CCCCcEEEECCccCCCC-----C----ccchhhHHHHHHHHHHHHH----HcC-
Confidence            46889999999999999888753   12799999999843211     1    1235567778777777653    333 


Q ss_pred             CCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHHHH
Q 025124          100 GQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK  179 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~  179 (257)
                             -+++|++||.....+   ...|..+|...+...+.     . ..+++...++|+.+..++.       .....
T Consensus       174 -------v~r~V~iSS~~v~~p---~~~~~~sK~~~E~~l~~-----~-~~gl~~tIlRp~~~~~~~~-------~~~~~  230 (390)
T PLN02657        174 -------AKHFVLLSAICVQKP---LLEFQRAKLKFEAELQA-----L-DSDFTYSIVRPTAFFKSLG-------GQVEI  230 (390)
T ss_pred             -------CCEEEEEeeccccCc---chHHHHHHHHHHHHHHh-----c-cCCCCEEEEccHHHhcccH-------HHHHh
Confidence                   467999999865432   34577888888776653     2 4589999999988764321       01111


Q ss_pred             hhhhcc----------CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCC-cccCCCCCCcHHHHHHHHHHHhccCC
Q 025124          180 ATDYMA----------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG-NWLSNPRDLPKEAVNQLSRAVERKSR  246 (257)
Q Consensus       180 ~~~~~~----------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg-~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (257)
                      .....+          ...+.+.+|+|..+..++.+..  ..|+.+++.|. ..+.     ..+..+.+.+..+++.+
T Consensus       231 ~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~--~~~~~~~Iggp~~~~S-----~~Eia~~l~~~lG~~~~  301 (390)
T PLN02657        231 VKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDES--KINKVLPIGGPGKALT-----PLEQGEMLFRILGKEPK  301 (390)
T ss_pred             hccCCceEEecCCcccccCceeHHHHHHHHHHHHhCcc--ccCCEEEcCCCCcccC-----HHHHHHHHHHHhCCCCc
Confidence            111100          1124678999999998885432  34678888662 3333     45666666666665543

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.66  E-value=4.8e-06  Score=70.52  Aligned_cols=191  Identities=15%  Similarity=0.103  Sum_probs=120.1

Q ss_pred             eEEEEccCCCHHHHHHHHHHHHHHhCCc-cEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           22 AIGLEGDVRKREDAVRVVESTINHFGKL-DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        22 ~~~~~~Dls~~~~~~~~~~~~~~~~g~i-d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      +.++.+|+++.+.....++       .. |++||.|+.........  . .....+.+|+.++.++.+++..    .+  
T Consensus        44 ~~~~~~d~~~~~~~~~~~~-------~~~d~vih~aa~~~~~~~~~--~-~~~~~~~~nv~gt~~ll~aa~~----~~--  107 (314)
T COG0451          44 VEFVVLDLTDRDLVDELAK-------GVPDAVIHLAAQSSVPDSNA--S-DPAEFLDVNVDGTLNLLEAARA----AG--  107 (314)
T ss_pred             cceeeecccchHHHHHHHh-------cCCCEEEEccccCchhhhhh--h-CHHHHHHHHHHHHHHHHHHHHH----cC--
Confidence            3556788888744444443       33 99999999654322111  1 3456889999999999999876    22  


Q ss_pred             CCCCCCCceEEEEccccccccc-----------c--cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCC
Q 025124          101 QASSSSGGIIINISATLHYTAT-----------W--YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG  167 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~~~-----------~--~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~  167 (257)
                            ..++|+.||.+...+.           +  ....|+.+|.+.+.+++....+    +|+.+..++|+.+..|..
T Consensus       108 ------~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~~~~~~~----~~~~~~ilR~~~vyGp~~  177 (314)
T COG0451         108 ------VKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARL----YGLPVVILRPFNVYGPGD  177 (314)
T ss_pred             ------CCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHHHH----hCCCeEEEeeeeeeCCCC
Confidence                  4568886665544322           1  1114999999999999998872    368999999998887765


Q ss_pred             CCCC---ChHHHHHHhhhhcc---C-------CCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHH
Q 025124          168 VSKL---APEEIRSKATDYMA---A-------YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAV  234 (257)
Q Consensus       168 ~~~~---~~~~~~~~~~~~~~---~-------~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~  234 (257)
                      ....   .............+   .       ..+...+|++++++.++.....   + .+++.++.    ...-..++.
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~-~~ni~~~~----~~~~~~e~~  249 (314)
T COG0451         178 KPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDG---G-VFNIGSGT----AEITVRELA  249 (314)
T ss_pred             CCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCCC---c-EEEeCCCC----CcEEHHHHH
Confidence            4431   11111111222221   1       1256799999999999975433   2 77777764    111235556


Q ss_pred             HHHHHHHhccCC
Q 025124          235 NQLSRAVERKSR  246 (257)
Q Consensus       235 ~~~~~~~~~~~~  246 (257)
                      ..+.+....+..
T Consensus       250 ~~~~~~~~~~~~  261 (314)
T COG0451         250 EAVAEAVGSKAP  261 (314)
T ss_pred             HHHHHHhCCCCc
Confidence            666666665533

>PLN02206 UDP-glucuronate decarboxylase

Probab=98.57  E-value=6.3e-06  Score=73.50  Aligned_cols=166  Identities=12%  Similarity=0.025  Sum_probs=105.5

Q ss_pred             CccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccc------
Q 025124           48 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA------  121 (257)
Q Consensus        48 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~------  121 (257)
                      ++|+|||.|+....... +   .+-...+++|+.++.++.+++...             +.++|++||...+..      
T Consensus       183 ~~D~ViHlAa~~~~~~~-~---~~p~~~~~~Nv~gt~nLleaa~~~-------------g~r~V~~SS~~VYg~~~~~p~  245 (442)
T PLN02206        183 EVDQIYHLACPASPVHY-K---FNPVKTIKTNVVGTLNMLGLAKRV-------------GARFLLTSTSEVYGDPLQHPQ  245 (442)
T ss_pred             CCCEEEEeeeecchhhh-h---cCHHHHHHHHHHHHHHHHHHHHHh-------------CCEEEEECChHHhCCCCCCCC
Confidence            58999999985433211 1   123568899999999999887543             236999999764321      


Q ss_pred             ----------cccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCC--CChHHHHHHhhhhcc----
Q 025124          122 ----------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK--LAPEEIRSKATDYMA----  185 (257)
Q Consensus       122 ----------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~----  185 (257)
                                ......|+.+|.+.+.+++.+..+    .++++..++|+.+..|.....  ..-..+........+    
T Consensus       246 ~E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~----~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~  321 (442)
T PLN02206        246 VETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG----ANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVY  321 (442)
T ss_pred             CccccccCCCCCccchHHHHHHHHHHHHHHHHHH----hCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEe
Confidence                      112357999999999998887654    368888899988886642211  111112122111111    


Q ss_pred             -----CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHHHHHHhc
Q 025124          186 -----AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVER  243 (257)
Q Consensus       186 -----~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~~~~~  243 (257)
                           ...+...+|++++++.++...    .+..+++.+|..+.     ..++.+.+.+....
T Consensus       322 g~G~~~rdfi~V~Dva~ai~~a~e~~----~~g~yNIgs~~~~s-----l~Elae~i~~~~g~  375 (442)
T PLN02206        322 GDGKQTRSFQFVSDLVEGLMRLMEGE----HVGPFNLGNPGEFT-----MLELAKVVQETIDP  375 (442)
T ss_pred             CCCCEEEeEEeHHHHHHHHHHHHhcC----CCceEEEcCCCcee-----HHHHHHHHHHHhCC
Confidence                 123678999999999888532    23478887765443     45666777666653

>CHL00194 ycf39 Ycf39; Provisional

Probab=98.56  E-value=1.6e-06  Score=74.09  Aligned_cols=180  Identities=13%  Similarity=0.035  Sum_probs=109.6

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      .+.++.+|++|++++..+++       ++|++||.++....         +.....++|+.+..++.+++...    +  
T Consensus        44 ~v~~v~~Dl~d~~~l~~al~-------g~d~Vi~~~~~~~~---------~~~~~~~~~~~~~~~l~~aa~~~----g--  101 (317)
T CHL00194         44 GAELVYGDLSLPETLPPSFK-------GVTAIIDASTSRPS---------DLYNAKQIDWDGKLALIEAAKAA----K--  101 (317)
T ss_pred             CCEEEECCCCCHHHHHHHHC-------CCCEEEECCCCCCC---------CccchhhhhHHHHHHHHHHHHHc----C--
Confidence            47889999999988876665       68999998763221         11235567788887777776432    2  


Q ss_pred             CCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHHHH-
Q 025124          101 QASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK-  179 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~-  179 (257)
                            -.++|++||..+..  .+...|..+|...+.+.+        ..|++...++|+.+...+...... ...... 
T Consensus       102 ------vkr~I~~Ss~~~~~--~~~~~~~~~K~~~e~~l~--------~~~l~~tilRp~~~~~~~~~~~~~-~~~~~~~  164 (317)
T CHL00194        102 ------IKRFIFFSILNAEQ--YPYIPLMKLKSDIEQKLK--------KSGIPYTIFRLAGFFQGLISQYAI-PILEKQP  164 (317)
T ss_pred             ------CCEEEEeccccccc--cCCChHHHHHHHHHHHHH--------HcCCCeEEEeecHHhhhhhhhhhh-hhccCCc
Confidence                  34799999864321  122457778887766543        346888889998664221100000 000000 


Q ss_pred             --hhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHHHHHHhccCC
Q 025124          180 --ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKSR  246 (257)
Q Consensus       180 --~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (257)
                        .........+.+.+|+|+++..++..+.  ..|+.+++.|+..+.     ..+....+.+..+++..
T Consensus       165 ~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~ni~g~~~~s-----~~el~~~~~~~~g~~~~  226 (317)
T CHL00194        165 IWITNESTPISYIDTQDAAKFCLKSLSLPE--TKNKTFPLVGPKSWN-----SSEIISLCEQLSGQKAK  226 (317)
T ss_pred             eEecCCCCccCccCHHHHHHHHHHHhcCcc--ccCcEEEecCCCccC-----HHHHHHHHHHHhCCCCe
Confidence              0000111235678999999999886432  247889998875544     45667777777666543

>PLN02778 3,5-epimerase/4-reductase

Probab=98.54  E-value=1.5e-05  Score=67.54  Aligned_cols=195  Identities=14%  Similarity=0.103  Sum_probs=115.3

Q ss_pred             HHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHH
Q 025124            9 RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH   88 (257)
Q Consensus         9 ~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~   88 (257)
                      ..+++.|.+.|.++.....|+.+.+.+...++..     ++|+|||+||....... +...++-...+++|+.++.++++
T Consensus        23 ~~l~~~L~~~g~~V~~~~~~~~~~~~v~~~l~~~-----~~D~ViH~Aa~~~~~~~-~~~~~~p~~~~~~Nv~gt~~ll~   96 (298)
T PLN02778         23 GLLGKLCQEQGIDFHYGSGRLENRASLEADIDAV-----KPTHVFNAAGVTGRPNV-DWCESHKVETIRANVVGTLTLAD   96 (298)
T ss_pred             HHHHHHHHhCCCEEEEecCccCCHHHHHHHHHhc-----CCCEEEECCcccCCCCc-hhhhhCHHHHHHHHHHHHHHHHH
Confidence            4567777777878877778898887776666532     68999999996543211 11223345688999999999999


Q ss_pred             HHHHHHHhcCCCCCCCCCCceEEEEccccccc------------------ccccchhhHHHHHHHHHHHHHHHHHhcCCC
Q 025124           89 EALKYLKKGGRGQASSSSGGIIINISATLHYT------------------ATWYQIHVSAAKAAVDSITRSLALEWGTDY  150 (257)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~------------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~  150 (257)
                      ++...    +         -+.+++||...+.                  +.+....|+.+|.+.+.+++..+.    ..
T Consensus        97 aa~~~----g---------v~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~~----~~  159 (298)
T PLN02778         97 VCRER----G---------LVLTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYEN----VC  159 (298)
T ss_pred             HHHHh----C---------CCEEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHHHHHHHHHHHHhhc----cE
Confidence            98653    1         1245555432110                  011235799999999999987653    22


Q ss_pred             CeEEEEEecCcccCCCCCCCCChHHHHHHhhhhc---cC-CCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCC
Q 025124          151 AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM---AA-YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNP  226 (257)
Q Consensus       151 gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~  226 (257)
                      ++|+.     ....+...   ....+........   .. ..+.+.+|++++++.++...   .. ..+++.++..+.  
T Consensus       160 ~lr~~-----~~~~~~~~---~~~~fi~~~~~~~~~~~~~~s~~yv~D~v~al~~~l~~~---~~-g~yNigs~~~iS--  225 (298)
T PLN02778        160 TLRVR-----MPISSDLS---NPRNFITKITRYEKVVNIPNSMTILDELLPISIEMAKRN---LT-GIYNFTNPGVVS--  225 (298)
T ss_pred             Eeeec-----ccCCcccc---cHHHHHHHHHcCCCeeEcCCCCEEHHHHHHHHHHHHhCC---CC-CeEEeCCCCccc--
Confidence            45542     21111100   0111222222211   11 23678899999999988532   23 488887664433  


Q ss_pred             CCCcHHHHHHHHHHHhc
Q 025124          227 RDLPKEAVNQLSRAVER  243 (257)
Q Consensus       227 ~~~~~~~~~~~~~~~~~  243 (257)
                         ..+++..+.+.+..
T Consensus       226 ---~~el~~~i~~~~~~  239 (298)
T PLN02778        226 ---HNEILEMYRDYIDP  239 (298)
T ss_pred             ---HHHHHHHHHHHhCC
Confidence               34555666666664

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.53  E-value=1.4e-06  Score=78.00  Aligned_cols=100  Identities=20%  Similarity=0.271  Sum_probs=81.3

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .+.+.+++..++.|..          .|+||+++|.....+   ...|+++|+++.+|++++++|+  +.+|+++.|.|+
T Consensus       100 ~~~~~~~~~~l~~l~~----------~griv~i~s~~~~~~---~~~~~~akaal~gl~rsla~E~--~~gi~v~~i~~~  164 (450)
T PRK08261        100 KALYEFFHPVLRSLAP----------CGRVVVLGRPPEAAA---DPAAAAAQRALEGFTRSLGKEL--RRGATAQLVYVA  164 (450)
T ss_pred             HHHHHHHHHHHHhccC----------CCEEEEEccccccCC---chHHHHHHHHHHHHHHHHHHHh--hcCCEEEEEecC
Confidence            3555677777777754          689999999876533   3469999999999999999998  569999999886


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      .                            ..+++++..+.|++++.+.+++|+.+.++++...
T Consensus       165 ~----------------------------~~~~~~~~~~~~l~s~~~a~~~g~~i~~~~~~~~  199 (450)
T PRK08261        165 P----------------------------GAEAGLESTLRFFLSPRSAYVSGQVVRVGAADAA  199 (450)
T ss_pred             C----------------------------CCHHHHHHHHHHhcCCccCCccCcEEEecCCccc
Confidence            4                            2567888899999998889999999999987643

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=98.53  E-value=1.2e-06  Score=73.71  Aligned_cols=201  Identities=13%  Similarity=0.044  Sum_probs=117.9

Q ss_pred             HHHHHHHHHhcCCCeEEE---EccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHH
Q 025124            8 LRSAVAALHSLGIPAIGL---EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF   84 (257)
Q Consensus         8 l~~~~~~l~~~~~~~~~~---~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~   84 (257)
                      ...+.+.+.+.+.++...   .+|++|.+++.+++.+.     ++|+|||+|+.....    .-.++-+..+.+|+.++.
T Consensus        13 G~~l~~~l~~~~~~v~~~~r~~~dl~d~~~~~~~~~~~-----~pd~Vin~aa~~~~~----~ce~~p~~a~~iN~~~~~   83 (286)
T PF04321_consen   13 GSALARALKERGYEVIATSRSDLDLTDPEAVAKLLEAF-----KPDVVINCAAYTNVD----ACEKNPEEAYAINVDATK   83 (286)
T ss_dssp             HHHHHHHHTTTSEEEEEESTTCS-TTSHHHHHHHHHHH-------SEEEE------HH----HHHHSHHHHHHHHTHHHH
T ss_pred             HHHHHHHHhhCCCEEEEeCchhcCCCCHHHHHHHHHHh-----CCCeEeccceeecHH----hhhhChhhhHHHhhHHHH
Confidence            455666676655455555   78999999999999876     689999999965321    122334568899999999


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccccc-----------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeE
Q 025124           85 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIR  153 (257)
Q Consensus        85 ~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~-----------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~  153 (257)
                      .+.+.+...             +.++|++||-....|.           .+...|+.+|...+..++...     +   +
T Consensus        84 ~la~~~~~~-------------~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~~~-----~---~  142 (286)
T PF04321_consen   84 NLAEACKER-------------GARLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVRAAC-----P---N  142 (286)
T ss_dssp             HHHHHHHHC-------------T-EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHHHHH------S---S
T ss_pred             HHHHHHHHc-------------CCcEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHHHHhc-----C---C
Confidence            998887542             5679999997544322           134579999999988887622     2   4


Q ss_pred             EEEEecCcccCCCCCCCCChHHHHHHhhhhcc-------CCCCCCHHhHHHHHHHhccCCCC-cccCcEEEecCCcccCC
Q 025124          154 VNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA-------AYKFGEKWDIAMAALYLASDAGK-YVNGNTLIVDGGNWLSN  225 (257)
Q Consensus       154 v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~dva~~~~~l~~~~~~-~~~G~~~~~dgg~~~~~  225 (257)
                      ...++++++..+  .....-..+.........       .......+|+|+.+..++..... .-.+.++.+.|...+. 
T Consensus       143 ~~IlR~~~~~g~--~~~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~~~~~S-  219 (286)
T PF04321_consen  143 ALILRTSWVYGP--SGRNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIEKNLSGASPWGIYHLSGPERVS-  219 (286)
T ss_dssp             EEEEEE-SEESS--SSSSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE---BS-EE-
T ss_pred             EEEEecceeccc--CCCchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHHhcccccccceeEEEecCcccC-
Confidence            566778888755  111111222222222111       11245689999999999975321 1224677777765444 


Q ss_pred             CCCCcHHHHHHHHHHHhccC
Q 025124          226 PRDLPKEAVNQLSRAVERKS  245 (257)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~  245 (257)
                          ...+...+.+..+.+.
T Consensus       220 ----~~e~~~~i~~~~~~~~  235 (286)
T PF04321_consen  220 ----RYEFAEAIAKILGLDP  235 (286)
T ss_dssp             ----HHHHHHHHHHHHTHCT
T ss_pred             ----HHHHHHHHHHHhCCCC
Confidence                5666777788777766

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=98.50  E-value=4.2e-05  Score=64.72  Aligned_cols=127  Identities=17%  Similarity=0.128  Sum_probs=84.4

Q ss_pred             HHHHHHHHhcCCCeEEE-------EccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            9 RSAVAALHSLGIPAIGL-------EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         9 ~~~~~~l~~~~~~~~~~-------~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      ..+++.|.+.| ++..+       ..|++|.+.+.++++..     ++|+|||+|+......    ..++-+..+.+|+.
T Consensus        14 s~l~~~L~~~g-~V~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~D~Vih~Aa~~~~~~----~~~~~~~~~~~N~~   83 (299)
T PRK09987         14 WELQRALAPLG-NLIALDVHSTDYCGDFSNPEGVAETVRKI-----RPDVIVNAAAHTAVDK----AESEPEFAQLLNAT   83 (299)
T ss_pred             HHHHHHhhccC-CEEEeccccccccCCCCCHHHHHHHHHhc-----CCCEEEECCccCCcch----hhcCHHHHHHHHHH
Confidence            34566666655 54433       36999999988887753     6899999999654321    11222456788999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccc-----------cccchhhHHHHHHHHHHHHHHHHHhcCCC
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-----------TWYQIHVSAAKAAVDSITRSLALEWGTDY  150 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~-----------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~  150 (257)
                      ++.++.+++...             +.++|++||...+.+           ..+...|+.+|.+.+.+++...     . 
T Consensus        84 ~~~~l~~aa~~~-------------g~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~~~-----~-  144 (299)
T PRK09987         84 SVEAIAKAANEV-------------GAWVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKALQEHC-----A-  144 (299)
T ss_pred             HHHHHHHHHHHc-------------CCeEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHHhC-----C-
Confidence            999998887542             235999998643311           1133579999999999887543     1 


Q ss_pred             CeEEEEEecCcccCCC
Q 025124          151 AIRVNGIAPGPIKDTA  166 (257)
Q Consensus       151 gi~v~~v~Pg~v~t~~  166 (257)
                        +...++|+++..|.
T Consensus       145 --~~~ilR~~~vyGp~  158 (299)
T PRK09987        145 --KHLIFRTSWVYAGK  158 (299)
T ss_pred             --CEEEEecceecCCC
Confidence              23667788887653

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=98.48  E-value=1.7e-06  Score=77.04  Aligned_cols=167  Identities=10%  Similarity=0.022  Sum_probs=107.0

Q ss_pred             CccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccc------
Q 025124           48 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA------  121 (257)
Q Consensus        48 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~------  121 (257)
                      ++|+|||.|+........ .   +-...+++|+.++.++++++...             +.++|++||...+..      
T Consensus       184 ~~D~ViHlAa~~~~~~~~-~---~p~~~~~~Nv~gT~nLleaa~~~-------------g~r~V~~SS~~VYg~~~~~p~  246 (436)
T PLN02166        184 EVDQIYHLACPASPVHYK-Y---NPVKTIKTNVMGTLNMLGLAKRV-------------GARFLLTSTSEVYGDPLEHPQ  246 (436)
T ss_pred             CCCEEEECceeccchhhc-c---CHHHHHHHHHHHHHHHHHHHHHh-------------CCEEEEECcHHHhCCCCCCCC
Confidence            689999999854332111 1   22467889999999998887643             236999998754321      


Q ss_pred             ----------cccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCC--CChHHHHHHhhhhcc----
Q 025124          122 ----------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK--LAPEEIRSKATDYMA----  185 (257)
Q Consensus       122 ----------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~----  185 (257)
                                ......|+.+|.+.+.+++.....    .++++..++|+.+..+.....  ..-..+........+    
T Consensus       247 ~E~~~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~----~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~  322 (436)
T PLN02166        247 KETYWGNVNPIGERSCYDEGKRTAETLAMDYHRG----AGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVY  322 (436)
T ss_pred             CccccccCCCCCCCCchHHHHHHHHHHHHHHHHH----hCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEe
Confidence                      112346999999999999887654    368888899988887643211  001112111211111    


Q ss_pred             -----CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHHHHHHhcc
Q 025124          186 -----AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERK  244 (257)
Q Consensus       186 -----~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~~~~~~  244 (257)
                           ...+...+|+++++..++...    .+..+++.+|..+.     ..++.+.|.+....+
T Consensus       323 g~g~~~rdfi~V~Dva~ai~~~~~~~----~~giyNIgs~~~~S-----i~ela~~I~~~~g~~  377 (436)
T PLN02166        323 GDGKQTRSFQYVSDLVDGLVALMEGE----HVGPFNLGNPGEFT-----MLELAEVVKETIDSS  377 (436)
T ss_pred             CCCCeEEeeEEHHHHHHHHHHHHhcC----CCceEEeCCCCcEe-----HHHHHHHHHHHhCCC
Confidence                 123678999999999888532    23478887765443     466777777766543

>PRK07201 short chain dehydrogenase; Provisional

Probab=98.47  E-value=4.7e-06  Score=78.11  Aligned_cols=189  Identities=13%  Similarity=0.040  Sum_probs=116.9

Q ss_pred             CCeEEEEccCCCHHHH--HHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Q 025124           20 IPAIGLEGDVRKREDA--VRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG   97 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~--~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~   97 (257)
                      .++.++.+|++|++..  ...++.+    .++|+|||+|+.....    .+   .....++|+.++.++++++..    .
T Consensus        51 ~~v~~~~~Dl~~~~~~~~~~~~~~l----~~~D~Vih~Aa~~~~~----~~---~~~~~~~nv~gt~~ll~~a~~----~  115 (657)
T PRK07201         51 DRVVPLVGDLTEPGLGLSEADIAEL----GDIDHVVHLAAIYDLT----AD---EEAQRAANVDGTRNVVELAER----L  115 (657)
T ss_pred             CcEEEEecccCCccCCcCHHHHHHh----cCCCEEEECceeecCC----CC---HHHHHHHHhHHHHHHHHHHHh----c
Confidence            4688999999985320  1112222    4799999999964321    12   245678899998888877643    2


Q ss_pred             CCCCCCCCCCceEEEEccccccccc-------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccC
Q 025124           98 GRGQASSSSGGIIINISATLHYTAT-------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD  164 (257)
Q Consensus        98 ~~~~~~~~~~g~ii~iss~~~~~~~-------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t  164 (257)
                      +        ..++|++||.......             .....|+.+|...+.+.+.       ..|+++..++|+.+..
T Consensus       116 ~--------~~~~v~~SS~~v~g~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~-------~~g~~~~ilRp~~v~G  180 (657)
T PRK07201        116 Q--------AATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTPYHRTKFEAEKLVRE-------ECGLPWRVYRPAVVVG  180 (657)
T ss_pred             C--------CCeEEEEeccccccCccCccccccchhhcCCCCchHHHHHHHHHHHHH-------cCCCcEEEEcCCeeee
Confidence            2        3579999987653211             1234699999999988752       2478999999999986


Q ss_pred             CCCCCCC---ChHH----HHHHhhhh---cc-------CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCC
Q 025124          165 TAGVSKL---APEE----IRSKATDY---MA-------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPR  227 (257)
Q Consensus       165 ~~~~~~~---~~~~----~~~~~~~~---~~-------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~  227 (257)
                      +......   ....    ........   .+       ...+...+|+++++..++...  ...|+.+++.++..+.   
T Consensus       181 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~~~~~--~~~g~~~ni~~~~~~s---  255 (657)
T PRK07201        181 DSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDHLMHKD--GRDGQTFHLTDPKPQR---  255 (657)
T ss_pred             cCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHHHHhcCc--CCCCCEEEeCCCCCCc---
Confidence            5321110   0000    11111000   00       112456899999999988632  3468888887764433   


Q ss_pred             CCcHHHHHHHHHHHhccC
Q 025124          228 DLPKEAVNQLSRAVERKS  245 (257)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~  245 (257)
                        ..++.+.+.+..+.+.
T Consensus       256 --~~el~~~i~~~~g~~~  271 (657)
T PRK07201        256 --VGDIYNAFARAAGAPP  271 (657)
T ss_pred             --HHHHHHHHHHHhCCCc
Confidence              5667777777776654

>PLN02996 fatty acyl-CoA reductase

Probab=98.39  E-value=8.4e-06  Score=73.69  Aligned_cols=193  Identities=11%  Similarity=0.037  Sum_probs=117.9

Q ss_pred             CCeEEEEccCCCH-------HHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Q 025124           20 IPAIGLEGDVRKR-------EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALK   92 (257)
Q Consensus        20 ~~~~~~~~Dls~~-------~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   92 (257)
                      .++.++.+|++++       +.++.+++       .+|+|||+|+....   .    +..+..+++|+.|+..+++++..
T Consensus        84 ~kv~~i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~---~----~~~~~~~~~Nv~gt~~ll~~a~~  149 (491)
T PLN02996         84 EKVTPVPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNF---D----ERYDVALGINTLGALNVLNFAKK  149 (491)
T ss_pred             cCEEEEecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCC---c----CCHHHHHHHHHHHHHHHHHHHHh
Confidence            4789999999843       33344433       58999999996432   1    23566889999999999888754


Q ss_pred             HHHhcCCCCCCCCCCceEEEEcccccccccc-------------------------------------------------
Q 025124           93 YLKKGGRGQASSSSGGIIINISATLHYTATW-------------------------------------------------  123 (257)
Q Consensus        93 ~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~-------------------------------------------------  123 (257)
                      .   ..        -.+++++||........                                                 
T Consensus       150 ~---~~--------~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (491)
T PLN02996        150 C---VK--------VKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQA  218 (491)
T ss_pred             c---CC--------CCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHH
Confidence            2   11        24689988865431100                                                 


Q ss_pred             -------------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCC-------hHHHHHHhhhh
Q 025124          124 -------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-------PEEIRSKATDY  183 (257)
Q Consensus       124 -------------~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~-------~~~~~~~~~~~  183 (257)
                                   ....|+.+|++.+.+++..    . . ++.+..++|..+..+.......       .......+...
T Consensus       219 ~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~~~----~-~-~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g  292 (491)
T PLN02996        219 MKDLGMERAKLHGWPNTYVFTKAMGEMLLGNF----K-E-NLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKG  292 (491)
T ss_pred             hhhhchhHHHhCCCCCchHhhHHHHHHHHHHh----c-C-CCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccc
Confidence                         1135999999999998653    2 2 7899999999997664221110       01111111111


Q ss_pred             c---------cCCCCCCHHhHHHHHHHhccCCC-CcccCcEEEecCCcccCCCCCCcHHHHHHHHHHHhccCC
Q 025124          184 M---------AAYKFGEKWDIAMAALYLASDAG-KYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKSR  246 (257)
Q Consensus       184 ~---------~~~~~~~~~dva~~~~~l~~~~~-~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (257)
                      .         ....+..+++++++++.++.... ..-.+.++++.+|.   ..+.-+..+.+.+.+...+.+-
T Consensus       293 ~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~~---~~~~s~~ei~~~~~~~~~~~p~  362 (491)
T PLN02996        293 KLTCFLADPNSVLDVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSSL---KNPVKFSNLHDFAYRYFSKNPW  362 (491)
T ss_pred             eEeEEecCCCeecceecccHHHHHHHHHHHHhhccCCCCcEEEecCCC---CCcccHHHHHHHHHHHhhhCCC
Confidence            1         12345778999999988876421 11246788888761   1222345566666665555443

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=98.36  E-value=7.3e-06  Score=67.65  Aligned_cols=189  Identities=19%  Similarity=0.070  Sum_probs=115.7

Q ss_pred             eEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCC
Q 025124           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ  101 (257)
Q Consensus        22 ~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  101 (257)
                      ..++.+|+.|.+.+++++++.     +||.|||.||....+    .+.++-.+.++-|+.|++.|++++...-.+     
T Consensus        46 ~~f~~gDi~D~~~L~~vf~~~-----~idaViHFAa~~~Vg----ESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~-----  111 (329)
T COG1087          46 FKFYEGDLLDRALLTAVFEEN-----KIDAVVHFAASISVG----ESVQNPLKYYDNNVVGTLNLIEAMLQTGVK-----  111 (329)
T ss_pred             CceEEeccccHHHHHHHHHhc-----CCCEEEECccccccc----hhhhCHHHHHhhchHhHHHHHHHHHHhCCC-----
Confidence            578899999999999999875     899999999954432    244445678899999999999887655322     


Q ss_pred             CCCCCCceEEEEcccccccccc------------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccC---C-
Q 025124          102 ASSSSGGIIINISATLHYTATW------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD---T-  165 (257)
Q Consensus       102 ~~~~~~g~ii~iss~~~~~~~~------------~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t---~-  165 (257)
                              -+.+||.++.+|.+            +...|+.||...+.+.+.++...    +.++..++=-.+..   + 
T Consensus       112 --------~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d~~~a~----~~~~v~LRYFN~aGA~~~G  179 (329)
T COG1087         112 --------KFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEILRDAAKAN----PFKVVILRYFNVAGACPDG  179 (329)
T ss_pred             --------EEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHHHHHHHHhC----CCcEEEEEecccccCCCCC
Confidence                    34456656665543            34579999999999999988754    45655553111110   0 


Q ss_pred             -CCCCCCCh----HHHHHHhhh----------------hccCCCCCCHHhHHHHHHHhccCCCCcccC--cEEEecCCcc
Q 025124          166 -AGVSKLAP----EEIRSKATD----------------YMAAYKFGEKWDIAMAALYLASDAGKYVNG--NTLIVDGGNW  222 (257)
Q Consensus       166 -~~~~~~~~----~~~~~~~~~----------------~~~~~~~~~~~dva~~~~~l~~~~~~~~~G--~~~~~dgg~~  222 (257)
                       ........    +...+....                ....+.++.+.|+|.+-+..+..-..  .|  ..+++..|.-
T Consensus       180 ~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~~Al~~L~~--~g~~~~~NLG~G~G  257 (329)
T COG1087         180 TLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAHVLALKYLKE--GGSNNIFNLGSGNG  257 (329)
T ss_pred             ccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHHHHHHHHHHh--CCceeEEEccCCCc
Confidence             11111111    111111111                11223467788999987766642221  23  4777776532


Q ss_pred             cCCCCCCcHHHHHHHHHHHhc
Q 025124          223 LSNPRDLPKEAVNQLSRAVER  243 (257)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~  243 (257)
                      ..     ..+.++++++..++
T Consensus       258 ~S-----V~evi~a~~~vtg~  273 (329)
T COG1087         258 FS-----VLEVIEAAKKVTGR  273 (329)
T ss_pred             ee-----HHHHHHHHHHHhCC
Confidence            22     24566666666654

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=98.35  E-value=5.7e-06  Score=64.60  Aligned_cols=145  Identities=15%  Similarity=0.085  Sum_probs=94.2

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      .|+++++++        ..+++++.+|+.|++++...+.       +.|++|+++|....        +           
T Consensus        29 ~R~~~~~~~--------~~~~~~~~~d~~d~~~~~~al~-------~~d~vi~~~~~~~~--------~-----------   74 (183)
T PF13460_consen   29 VRSPSKAED--------SPGVEIIQGDLFDPDSVKAALK-------GADAVIHAAGPPPK--------D-----------   74 (183)
T ss_dssp             ESSGGGHHH--------CTTEEEEESCTTCHHHHHHHHT-------TSSEEEECCHSTTT--------H-----------
T ss_pred             ecCchhccc--------ccccccceeeehhhhhhhhhhh-------hcchhhhhhhhhcc--------c-----------
Confidence            466665554        4679999999999988777765       78999999975432        1           


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccccccc---------chhhHHHHHHHHHHHHHHHHHhcCCCCe
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY---------QIHVSAAKAAVDSITRSLALEWGTDYAI  152 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~---------~~~Y~~sK~a~~~l~~~la~e~~~~~gi  152 (257)
                        ...++.++..+++.+        -.+++++|+.........         ...|...|...+.+.+        ..++
T Consensus        75 --~~~~~~~~~a~~~~~--------~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~--------~~~~  136 (183)
T PF13460_consen   75 --VDAAKNIIEAAKKAG--------VKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEALR--------ESGL  136 (183)
T ss_dssp             --HHHHHHHHHHHHHTT--------SSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHHH--------HSTS
T ss_pred             --ccccccccccccccc--------cccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHHH--------hcCC
Confidence              344566666666655        568999999876554332         1345555554443331        3479


Q ss_pred             EEEEEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhcc
Q 025124          153 RVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  204 (257)
Q Consensus       153 ~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  204 (257)
                      +...++|+++..+..........      .......+.+.+|+|++++.++.
T Consensus       137 ~~~ivrp~~~~~~~~~~~~~~~~------~~~~~~~~i~~~DvA~~~~~~l~  182 (183)
T PF13460_consen  137 NWTIVRPGWIYGNPSRSYRLIKE------GGPQGVNFISREDVAKAIVEALE  182 (183)
T ss_dssp             EEEEEEESEEEBTTSSSEEEESS------TSTTSHCEEEHHHHHHHHHHHHH
T ss_pred             CEEEEECcEeEeCCCcceeEEec------cCCCCcCcCCHHHHHHHHHHHhC
Confidence            99999999998764221100000      11112246789999999998874

...

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=98.33  E-value=0.00013  Score=68.67  Aligned_cols=194  Identities=14%  Similarity=0.097  Sum_probs=115.0

Q ss_pred             HHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHH
Q 025124            8 LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC   87 (257)
Q Consensus         8 l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~   87 (257)
                      ...+.+.|.+.|.++.+...|++|.+.+...+...     ++|+|||+|+....... +...++-+..+++|+.++.+++
T Consensus       393 G~~l~~~L~~~g~~v~~~~~~l~d~~~v~~~i~~~-----~pd~Vih~Aa~~~~~~~-~~~~~~~~~~~~~N~~gt~~l~  466 (668)
T PLN02260        393 GGLLGKLCEKQGIAYEYGKGRLEDRSSLLADIRNV-----KPTHVFNAAGVTGRPNV-DWCESHKVETIRANVVGTLTLA  466 (668)
T ss_pred             HHHHHHHHHhCCCeEEeeccccccHHHHHHHHHhh-----CCCEEEECCcccCCCCC-ChHHhCHHHHHHHHhHHHHHHH
Confidence            34566777776767766778999998887776654     68999999996532211 2223344678899999999999


Q ss_pred             HHHHHHHHhcCCCCCCCCCCceEEEEccccccc-----------c-------cccchhhHHHHHHHHHHHHHHHHHhcCC
Q 025124           88 HEALKYLKKGGRGQASSSSGGIIINISATLHYT-----------A-------TWYQIHVSAAKAAVDSITRSLALEWGTD  149 (257)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~-----------~-------~~~~~~Y~~sK~a~~~l~~~la~e~~~~  149 (257)
                      +++...             +.+++++||.....           +       .+....|+.+|.+.+.+++....    -
T Consensus       467 ~a~~~~-------------g~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~~~----~  529 (668)
T PLN02260        467 DVCREN-------------GLLMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREYDN----V  529 (668)
T ss_pred             HHHHHc-------------CCeEEEEcccceecCCcccccccCCCCCcCCCCCCCCChhhHHHHHHHHHHHhhhh----h
Confidence            998653             22356665532110           1       11236799999999999987642    2


Q ss_pred             CCeEEEEEecCcccCCCCCCCCChHHHHHHhhhhc---cC-CCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCC
Q 025124          150 YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM---AA-YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSN  225 (257)
Q Consensus       150 ~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~  225 (257)
                      ..+|+..+..+....+        ..+...+....   .. ......+++..+++.++...    .|..+++.++-.+. 
T Consensus       530 ~~~r~~~~~~~~~~~~--------~nfv~~~~~~~~~~~vp~~~~~~~~~~~~~~~l~~~~----~~giyni~~~~~~s-  596 (668)
T PLN02260        530 CTLRVRMPISSDLSNP--------RNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRN----LRGIWNFTNPGVVS-  596 (668)
T ss_pred             eEEEEEEecccCCCCc--------cHHHHHHhccceeeccCCCceehhhHHHHHHHHHHhC----CCceEEecCCCcCc-
Confidence            3567766653322111        11111111110   01 11234455666657776431    14688887764433 


Q ss_pred             CCCCcHHHHHHHHHHH
Q 025124          226 PRDLPKEAVNQLSRAV  241 (257)
Q Consensus       226 ~~~~~~~~~~~~~~~~  241 (257)
                          +..+...|.+..
T Consensus       597 ----~~e~a~~i~~~~  608 (668)
T PLN02260        597 ----HNEILEMYKDYI  608 (668)
T ss_pred             ----HHHHHHHHHHhc
Confidence                556666666654

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=98.30  E-value=8.6e-06  Score=66.52  Aligned_cols=192  Identities=12%  Similarity=0.067  Sum_probs=128.7

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .+..++..|+.+...+..++.+     ..+|.|+|-|+........   .+. -..++.|+.++..+.........    
T Consensus        57 p~ykfv~~di~~~~~~~~~~~~-----~~id~vihfaa~t~vd~s~---~~~-~~~~~nnil~t~~Lle~~~~sg~----  123 (331)
T KOG0747|consen   57 PNYKFVEGDIADADLVLYLFET-----EEIDTVIHFAAQTHVDRSF---GDS-FEFTKNNILSTHVLLEAVRVSGN----  123 (331)
T ss_pred             CCceEeeccccchHHHHhhhcc-----CchhhhhhhHhhhhhhhhc---Cch-HHHhcCCchhhhhHHHHHHhccC----
Confidence            5788999999999998887764     4899999999965542211   111 23677899999988888766542    


Q ss_pred             CCCCCCCCceEEEEcccccccc------------cccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCC
Q 025124          100 GQASSSSGGIIINISATLHYTA------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG  167 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~~------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~  167 (257)
                             -.++|.+|+-..+..            ..+...|+++|+|.+++.+++...+    |+.++.++-+.|..|..
T Consensus       124 -------i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKaAaE~~v~Sy~~sy----~lpvv~~R~nnVYGP~q  192 (331)
T KOG0747|consen  124 -------IRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKAAAEMLVRSYGRSY----GLPVVTTRMNNVYGPNQ  192 (331)
T ss_pred             -------eeEEEEecccceecCccccccccccccCCCCCchHHHHHHHHHHHHHHhhcc----CCcEEEEeccCccCCCc
Confidence                   346999998654321            1134579999999999999999865    58999999999998865


Q ss_pred             CCCCChHHHHHHhh---------hhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHHH
Q 025124          168 VSKLAPEEIRSKAT---------DYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLS  238 (257)
Q Consensus       168 ~~~~~~~~~~~~~~---------~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~  238 (257)
                      ...-.-..+.....         +......+...+|+++++...+...   -.|+.+++..-..+.     -.++.+.|.
T Consensus       193 ~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~Kg---~~geIYNIgtd~e~~-----~~~l~k~i~  264 (331)
T KOG0747|consen  193 YPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEKG---ELGEIYNIGTDDEMR-----VIDLAKDIC  264 (331)
T ss_pred             ChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhcC---CccceeeccCcchhh-----HHHHHHHHH
Confidence            43211111111111         1122234678999999998888652   258888887654443     234444454


Q ss_pred             HHHhc
Q 025124          239 RAVER  243 (257)
Q Consensus       239 ~~~~~  243 (257)
                      +.+..
T Consensus       265 eli~~  269 (331)
T KOG0747|consen  265 ELFEK  269 (331)
T ss_pred             HHHHH
Confidence            44443

>PRK05865 hypothetical protein; Provisional

Probab=98.22  E-value=2.5e-05  Score=74.27  Aligned_cols=141  Identities=13%  Similarity=0.060  Sum_probs=94.1

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      ++.++.+|++|.+++..+++       ++|+|||+|+....             .+++|+.++.++++++    .+.+  
T Consensus        41 ~v~~v~gDL~D~~~l~~al~-------~vD~VVHlAa~~~~-------------~~~vNv~GT~nLLeAa----~~~g--   94 (854)
T PRK05865         41 SADFIAADIRDATAVESAMT-------GADVVAHCAWVRGR-------------NDHINIDGTANVLKAM----AETG--   94 (854)
T ss_pred             CceEEEeeCCCHHHHHHHHh-------CCCEEEECCCcccc-------------hHHHHHHHHHHHHHHH----HHcC--
Confidence            46678999999998887765       58999999985321             3578999988776654    3333  


Q ss_pred             CCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHHHHh
Q 025124          101 QASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA  180 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~  180 (257)
                            .++||++||..              |.+.+.+++        .+++.+..++|+.+..+..      ..+....
T Consensus        95 ------vkr~V~iSS~~--------------K~aaE~ll~--------~~gl~~vILRp~~VYGP~~------~~~i~~l  140 (854)
T PRK05865         95 ------TGRIVFTSSGH--------------QPRVEQMLA--------DCGLEWVAVRCALIFGRNV------DNWVQRL  140 (854)
T ss_pred             ------CCeEEEECCcH--------------HHHHHHHHH--------HcCCCEEEEEeceEeCCCh------HHHHHHH
Confidence                  46899999963              776666553        2468999999999987631      1111111


Q ss_pred             hh--hccC------CCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          181 TD--YMAA------YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       181 ~~--~~~~------~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ..  ..+.      ..+.+.+|+++++..++....  ..|..+++.+|..+
T Consensus       141 l~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~--~~ggvyNIgsg~~~  189 (854)
T PRK05865        141 FALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTV--IDSGPVNLAAPGEL  189 (854)
T ss_pred             hcCceeccCCCCceEeeeeHHHHHHHHHHHHhCCC--cCCCeEEEECCCcc
Confidence            11  1111      136789999999998885321  23567888777543

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=98.15  E-value=2.1e-05  Score=64.74  Aligned_cols=119  Identities=16%  Similarity=0.132  Sum_probs=69.8

Q ss_pred             CCCeEEEEccCCCHHH-H-HHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Q 025124           19 GIPAIGLEGDVRKRED-A-VRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKK   96 (257)
Q Consensus        19 ~~~~~~~~~Dls~~~~-~-~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~   96 (257)
                      ..+++++.+|++++.- + ....+++.+   .+|+|||+|+......       .++...++|+.|+..+++.+..    
T Consensus        59 ~~ri~~v~GDl~~~~lGL~~~~~~~L~~---~v~~IiH~Aa~v~~~~-------~~~~~~~~NV~gt~~ll~la~~----  124 (249)
T PF07993_consen   59 LSRIEVVEGDLSQPNLGLSDEDYQELAE---EVDVIIHCAASVNFNA-------PYSELRAVNVDGTRNLLRLAAQ----  124 (249)
T ss_dssp             TTTEEEEE--TTSGGGG--HHHHHHHHH---H--EEEE--SS-SBS--------S--EEHHHHHHHHHHHHHHHTS----
T ss_pred             hccEEEEeccccccccCCChHHhhcccc---ccceeeecchhhhhcc-------cchhhhhhHHHHHHHHHHHHHh----
Confidence            4689999999998651 1 122333322   5899999999544321       2334678899999999888852    


Q ss_pred             cCCCCCCCCCCceEEEEccccccccc---------------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEE
Q 025124           97 GGRGQASSSSGGIIINISATLHYTAT---------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN  155 (257)
Q Consensus        97 ~~~~~~~~~~~g~ii~iss~~~~~~~---------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~  155 (257)
                      ..        ..+++++||. ...+.                     .....|..||...+.+.+..+.+.    |+.+.
T Consensus       125 ~~--------~~~~~~iSTa-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~----g~p~~  191 (249)
T PF07993_consen  125 GK--------RKRFHYISTA-YVAGSRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRH----GLPVT  191 (249)
T ss_dssp             SS-----------EEEEEEG-GGTTS-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH-------EE
T ss_pred             cc--------CcceEEeccc-cccCCCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcC----CceEE
Confidence            11        3479999983 22111                     123479999999999999888653    58899


Q ss_pred             EEecCcccC
Q 025124          156 GIAPGPIKD  164 (257)
Q Consensus       156 ~v~Pg~v~t  164 (257)
                      .++||.+..
T Consensus       192 I~Rp~~i~g  200 (249)
T PF07993_consen  192 IYRPGIIVG  200 (249)
T ss_dssp             EEEE-EEE-
T ss_pred             EEecCcccc
Confidence            999999975

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=98.15  E-value=0.00036  Score=70.99  Aligned_cols=173  Identities=12%  Similarity=0.091  Sum_probs=104.4

Q ss_pred             CeEEEEccCCCHHHH--HHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Q 025124           21 PAIGLEGDVRKREDA--VRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~--~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (257)
                      ++.++.+|++++.-.  ...++++.   ..+|++||+|+....    ..+   +......|+.|+..+++.+..    .+
T Consensus      1035 ~i~~~~gDl~~~~lgl~~~~~~~l~---~~~d~iiH~Aa~~~~----~~~---~~~~~~~nv~gt~~ll~~a~~----~~ 1100 (1389)
T TIGR03443      1035 RIEVVLGDLSKEKFGLSDEKWSDLT---NEVDVIIHNGALVHW----VYP---YSKLRDANVIGTINVLNLCAE----GK 1100 (1389)
T ss_pred             ceEEEeccCCCccCCcCHHHHHHHH---hcCCEEEECCcEecC----ccC---HHHHHHhHHHHHHHHHHHHHh----CC
Confidence            688999999865210  11122222   368999999995432    112   334556799999998887643    22


Q ss_pred             CCCCCCCCCceEEEEcccccccc-----------------c-----------ccchhhHHHHHHHHHHHHHHHHHhcCCC
Q 025124           99 RGQASSSSGGIIINISATLHYTA-----------------T-----------WYQIHVSAAKAAVDSITRSLALEWGTDY  150 (257)
Q Consensus        99 ~~~~~~~~~g~ii~iss~~~~~~-----------------~-----------~~~~~Y~~sK~a~~~l~~~la~e~~~~~  150 (257)
                              ..+++++||.+.+.+                 .           .....|+.+|.+.+.+++..+     ..
T Consensus      1101 --------~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~-----~~ 1167 (1389)
T TIGR03443      1101 --------AKQFSFVSSTSALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAG-----KR 1167 (1389)
T ss_pred             --------CceEEEEeCeeecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHH-----hC
Confidence                    356999999754311                 0           012359999999999887643     23


Q ss_pred             CeEEEEEecCcccCCCCCCCCChHHHHHHhhh------hcc----CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCC
Q 025124          151 AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD------YMA----AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG  220 (257)
Q Consensus       151 gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~------~~~----~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg  220 (257)
                      |+++..++||.+..+.........+.......      ..+    ...+...++++++++.++........+..+.+.++
T Consensus      1168 g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~ 1247 (1389)
T TIGR03443      1168 GLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGH 1247 (1389)
T ss_pred             CCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCC
Confidence            79999999999976532222112222221111      111    12356789999999998864322223455666554

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=98.05  E-value=0.00015  Score=61.95  Aligned_cols=115  Identities=16%  Similarity=0.122  Sum_probs=81.7

Q ss_pred             CCCeEEEEccCCCHH------HHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHHhHHHHHHHHHHH
Q 025124           19 GIPAIGLEGDVRKRE------DAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEAL   91 (257)
Q Consensus        19 ~~~~~~~~~Dls~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   91 (257)
                      ..++..+.+|++.+.      ..+.+.+       .+|.||||++..+. .+        ..+....|+.|+..+.+.+.
T Consensus        59 ~~ri~vv~gDl~e~~lGL~~~~~~~La~-------~vD~I~H~gA~Vn~v~p--------Ys~L~~~NVlGT~evlrLa~  123 (382)
T COG3320          59 ADRVEVVAGDLAEPDLGLSERTWQELAE-------NVDLIIHNAALVNHVFP--------YSELRGANVLGTAEVLRLAA  123 (382)
T ss_pred             cceEEEEecccccccCCCCHHHHHHHhh-------hcceEEecchhhcccCc--------HHHhcCcchHhHHHHHHHHh
Confidence            568999999998333      3333333       58999999995432 22        34577889999988888775


Q ss_pred             HHHHhcCCCCCCCCCCceEEEEcccccccc--------------------cccchhhHHHHHHHHHHHHHHHHHhcCCCC
Q 025124           92 KYLKKGGRGQASSSSGGIIINISATLHYTA--------------------TWYQIHVSAAKAAVDSITRSLALEWGTDYA  151 (257)
Q Consensus        92 ~~~~~~~~~~~~~~~~g~ii~iss~~~~~~--------------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~g  151 (257)
                      -.    +        ..-+.+|||.+....                    ....+.|+.||.+.+-+++...     +.|
T Consensus       124 ~g----k--------~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~-----~rG  186 (382)
T COG3320         124 TG----K--------PKPLHYVSSISVGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAG-----DRG  186 (382)
T ss_pred             cC----C--------CceeEEEeeeeeccccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHh-----hcC
Confidence            31    1        233899998874321                    1233689999999999888655     448


Q ss_pred             eEEEEEecCcccCC
Q 025124          152 IRVNGIAPGPIKDT  165 (257)
Q Consensus       152 i~v~~v~Pg~v~t~  165 (257)
                      .++..++||++-.+
T Consensus       187 Lpv~I~Rpg~I~gd  200 (382)
T COG3320         187 LPVTIFRPGYITGD  200 (382)
T ss_pred             CCeEEEecCeeecc
Confidence            99999999999644

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.03  E-value=0.00041  Score=56.85  Aligned_cols=216  Identities=14%  Similarity=0.126  Sum_probs=119.9

Q ss_pred             HHHHHHHHhcCCCeEEEEccCCCHHHHHH----HHHHHHHHhC-CccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHH
Q 025124            9 RSAVAALHSLGIPAIGLEGDVRKREDAVR----VVESTINHFG-KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT   83 (257)
Q Consensus         9 ~~~~~~l~~~~~~~~~~~~Dls~~~~~~~----~~~~~~~~~g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~   83 (257)
                      ..+.+.+.+.|..+..+.=+....+....    ..+.+.+... ++|+|||-||-.-...-+  +.+.=+..    +.+.
T Consensus        12 ~~L~~~L~~~gh~v~iltR~~~~~~~~~~~~v~~~~~~~~~~~~~~DavINLAG~~I~~rrW--t~~~K~~i----~~SR   85 (297)
T COG1090          12 RALTARLRKGGHQVTILTRRPPKASQNLHPNVTLWEGLADALTLGIDAVINLAGEPIAERRW--TEKQKEEI----RQSR   85 (297)
T ss_pred             HHHHHHHHhCCCeEEEEEcCCcchhhhcCccccccchhhhcccCCCCEEEECCCCccccccC--CHHHHHHH----HHHH
Confidence            35677788877778777655443333222    2333333323 699999999965443312  22222223    3456


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhH----HHHHHHHHHHHHHHHHhc--CCCCeEEEEE
Q 025124           84 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS----AAKAAVDSITRSLALEWG--TDYAIRVNGI  157 (257)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~----~sK~a~~~l~~~la~e~~--~~~gi~v~~v  157 (257)
                      +..++.+...+.+...       ++.+..=+|..++++......|.    .....+..+++.+-.+-.  ...|+||+.+
T Consensus        86 i~~T~~L~e~I~~~~~-------~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~~a~~a~~~gtRvvll  158 (297)
T COG1090          86 INTTEKLVELIAASET-------KPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEEALQAQQLGTRVVLL  158 (297)
T ss_pred             hHHHHHHHHHHHhccC-------CCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHHHHhhhhhcCceEEEE
Confidence            6677777777765431       33333334444555544333221    122344445554433321  1568999999


Q ss_pred             ecCcccCCCC--CCCCChHHHHHH----hhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcH
Q 025124          158 APGPIKDTAG--VSKLAPEEIRSK----ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPK  231 (257)
Q Consensus       158 ~Pg~v~t~~~--~~~~~~~~~~~~----~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~  231 (257)
                      +-|.|..+..  ...+.+ .+.-.    +........++..||+.+.+.|++.+.  .+.| .+++.     .+.+..-+
T Consensus       159 RtGvVLs~~GGaL~~m~~-~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~--~lsG-p~N~t-----aP~PV~~~  229 (297)
T COG1090         159 RTGVVLSPDGGALGKMLP-LFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENE--QLSG-PFNLT-----APNPVRNK  229 (297)
T ss_pred             EEEEEecCCCcchhhhcc-hhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCc--CCCC-ccccc-----CCCcCcHH
Confidence            9999987532  111111 11111    111112223678999999999999753  2555 34443     36777788


Q ss_pred             HHHHHHHHHHhccCC
Q 025124          232 EAVNQLSRAVERKSR  246 (257)
Q Consensus       232 ~~~~~~~~~~~~~~~  246 (257)
                      ++..++.++..|+..
T Consensus       230 ~F~~al~r~l~RP~~  244 (297)
T COG1090         230 EFAHALGRALHRPAI  244 (297)
T ss_pred             HHHHHHHHHhCCCcc
Confidence            889999988876544

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=98.00  E-value=2.7e-05  Score=63.15  Aligned_cols=77  Identities=13%  Similarity=0.105  Sum_probs=60.6

Q ss_pred             HHHHHHHHhcCCCeEEE------------EccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHH
Q 025124            9 RSAVAALHSLGIPAIGL------------EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVI   76 (257)
Q Consensus         9 ~~~~~~l~~~~~~~~~~------------~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~   76 (257)
                      ..++..+.+.|.++..+            .+|+++.++++++++++.+.++++|++|||||+....++.+.+.++|+++.
T Consensus        29 ~AIA~~la~~Ga~Vvlv~~~~~l~~~~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv~d~~~~~~~s~e~~~~~~  108 (227)
T TIGR02114        29 KIITETFLSAGHEVTLVTTKRALKPEPHPNLSIREIETTKDLLITLKELVQEHDILIHSMAVSDYTPVYMTDLEQVQASD  108 (227)
T ss_pred             HHHHHHHHHCCCEEEEEcChhhcccccCCcceeecHHHHHHHHHHHHHHcCCCCEEEECCEeccccchhhCCHHHHhhhc
Confidence            35566666666655432            479999999999999999999999999999998777888899999999774


Q ss_pred             HHHhHHHHHHHH
Q 025124           77 EIDSVGTFIMCH   88 (257)
Q Consensus        77 ~~n~~~~~~l~~   88 (257)
                      .   .+.|.+.+
T Consensus       109 ~---~~~~~~~~  117 (227)
T TIGR02114       109 N---LNEFLSKQ  117 (227)
T ss_pred             c---hhhhhccc
Confidence            3   45555554

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=97.98  E-value=0.00069  Score=56.70  Aligned_cols=172  Identities=13%  Similarity=0.092  Sum_probs=93.0

Q ss_pred             HHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccccc-
Q 025124           44 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-  122 (257)
Q Consensus        44 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~-  122 (257)
                      +.+.++|+|||+||.....  .....+.....+++|+.++..+++++...    +.      +...+++.|+...+... 
T Consensus        53 ~~~~~~D~Vvh~a~~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~------~~~~~i~~S~~~~yg~~~  120 (292)
T TIGR01777        53 EALEGADAVINLAGEPIAD--KRWTEERKQEIRDSRIDTTRALVEAIAAA----EQ------KPKVFISASAVGYYGTSE  120 (292)
T ss_pred             hhcCCCCEEEECCCCCccc--ccCCHHHHHHHHhcccHHHHHHHHHHHhc----CC------CceEEEEeeeEEEeCCCC
Confidence            3456799999999964321  12334455667889999988888777542    10      01234444443211100 


Q ss_pred             ---------c-cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHHHHh--------hhhc
Q 025124          123 ---------W-YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA--------TDYM  184 (257)
Q Consensus       123 ---------~-~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~--------~~~~  184 (257)
                               + ....|+..+...+...+    .+. ..++.+..++|+.+..+..  ... .......        ....
T Consensus       121 ~~~~~E~~~~~~~~~~~~~~~~~e~~~~----~~~-~~~~~~~ilR~~~v~G~~~--~~~-~~~~~~~~~~~~~~~g~~~  192 (292)
T TIGR01777       121 DRVFTEEDSPAGDDFLAELCRDWEEAAQ----AAE-DLGTRVVLLRTGIVLGPKG--GAL-AKMLPPFRLGLGGPLGSGR  192 (292)
T ss_pred             CCCcCcccCCCCCChHHHHHHHHHHHhh----hch-hcCCceEEEeeeeEECCCc--chh-HHHHHHHhcCcccccCCCC
Confidence                     0 11122333333322222    223 4579999999999987631  111 1111000        0111


Q ss_pred             cCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHHHHHHhc
Q 025124          185 AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVER  243 (257)
Q Consensus       185 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~~~~~  243 (257)
                      ....+.+.+|+++++..++....  ..| .+++.++..+.     ..++.+.|.+....
T Consensus       193 ~~~~~i~v~Dva~~i~~~l~~~~--~~g-~~~~~~~~~~s-----~~di~~~i~~~~g~  243 (292)
T TIGR01777       193 QWFSWIHIEDLVQLILFALENAS--ISG-PVNATAPEPVR-----NKEFAKALARALHR  243 (292)
T ss_pred             cccccEeHHHHHHHHHHHhcCcc--cCC-ceEecCCCccC-----HHHHHHHHHHHhCC
Confidence            12356789999999999996432  233 56665543333     56777777777764

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=97.78  E-value=0.00024  Score=59.40  Aligned_cols=107  Identities=17%  Similarity=0.130  Sum_probs=81.4

Q ss_pred             CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Q 025124           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (257)
Q Consensus        19 ~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (257)
                      +..+.++..|++|.+.++.+++..     ++|.|+|-|+....+.    ..+......+.|+.|++++......+    +
T Consensus        53 ~~~v~f~~~Dl~D~~~L~kvF~~~-----~fd~V~Hfa~~~~vge----S~~~p~~Y~~nNi~gtlnlLe~~~~~----~  119 (343)
T KOG1371|consen   53 GKSVFFVEGDLNDAEALEKLFSEV-----KFDAVMHFAALAAVGE----SMENPLSYYHNNIAGTLNLLEVMKAH----N  119 (343)
T ss_pred             CCceEEEEeccCCHHHHHHHHhhc-----CCceEEeehhhhccch----hhhCchhheehhhhhHHHHHHHHHHc----C
Confidence            578999999999999999999876     6999999999655432    23333678889999999988776543    3


Q ss_pred             CCCCCCCCCceEEEEccccccc-----------cc-ccchhhHHHHHHHHHHHHHHHHHh
Q 025124           99 RGQASSSSGGIIINISATLHYT-----------AT-WYQIHVSAAKAAVDSITRSLALEW  146 (257)
Q Consensus        99 ~~~~~~~~~g~ii~iss~~~~~-----------~~-~~~~~Y~~sK~a~~~l~~~la~e~  146 (257)
                              -..+|+.||...+.           +. .+...|+.+|.+++..+.....-+
T Consensus       120 --------~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~iE~i~~d~~~~~  171 (343)
T KOG1371|consen  120 --------VKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAIEEIIHDYNKAY  171 (343)
T ss_pred             --------CceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHHHHHHHhhhccc
Confidence                    24588888765432           11 255679999999999999888754

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=97.73  E-value=0.0014  Score=56.32  Aligned_cols=176  Identities=14%  Similarity=0.051  Sum_probs=109.5

Q ss_pred             CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Q 025124           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (257)
Q Consensus        19 ~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (257)
                      ..++..+.+|+.+..++...+.       +. .+||+|....+.    .-..+-+..+++|+.|+.++...+...    +
T Consensus        54 ~~~v~~~~~D~~~~~~i~~a~~-------~~-~Vvh~aa~~~~~----~~~~~~~~~~~vNV~gT~nvi~~c~~~----~  117 (361)
T KOG1430|consen   54 SGRVTVILGDLLDANSISNAFQ-------GA-VVVHCAASPVPD----FVENDRDLAMRVNVNGTLNVIEACKEL----G  117 (361)
T ss_pred             CCceeEEecchhhhhhhhhhcc-------Cc-eEEEeccccCcc----ccccchhhheeecchhHHHHHHHHHHh----C
Confidence            3567788899998888887765       55 778887754332    222255678999999988888777554    2


Q ss_pred             CCCCCCCCCceEEEEcccccccc------------cc--cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccC
Q 025124           99 RGQASSSSGGIIINISATLHYTA------------TW--YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD  164 (257)
Q Consensus        99 ~~~~~~~~~g~ii~iss~~~~~~------------~~--~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t  164 (257)
                              -.++|++||.....+            .|  ....|+.||+-.+.+++..+.    ..+....+++|..+..
T Consensus       118 --------v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~----~~~l~T~aLR~~~IYG  185 (361)
T KOG1430|consen  118 --------VKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKALAEKLVLEANG----SDDLYTCALRPPGIYG  185 (361)
T ss_pred             --------CCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHHHHHHHHHhcC----CCCeeEEEEccccccC
Confidence                    356999999865432            22  234799999999998887663    3458889999999997


Q ss_pred             CCCCCCCChHHHHHHhhhhcc---------CCCCCCHHhHHHHH--HHh-ccCCCCcccCcEEEecCCcccC
Q 025124          165 TAGVSKLAPEEIRSKATDYMA---------AYKFGEKWDIAMAA--LYL-ASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~--~~l-~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      |.-....  ...........-         ...+...+-++.+.  ... +.+....++|+.+.+..|....
T Consensus       186 pgd~~~~--~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~~p~~  255 (361)
T KOG1430|consen  186 PGDKRLL--PKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDKSPSVNGQFYFITDDTPVR  255 (361)
T ss_pred             CCCcccc--HHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhcCCccCceEEEEeCCCcch
Confidence            6432222  111111111111         11122333333322  111 1125566899999998875544

>PRK08309 short chain dehydrogenase; Provisional

Probab=97.47  E-value=0.0058  Score=47.60  Aligned_cols=56  Identities=20%  Similarity=0.178  Sum_probs=46.7

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCC
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG   58 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~   58 (257)
                      +|+.++++.+...+.. ..++.++.+|++|.+++..+++.+.+.++++|++|+.+-.
T Consensus        30 ~R~~~~~~~l~~~l~~-~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv~~vh~   85 (177)
T PRK08309         30 ARREVKLENVKRESTT-PESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAVAWIHS   85 (177)
T ss_pred             ECCHHHHHHHHHHhhc-CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence            5777777776665543 4578889999999999999999999999999999988774

>PLN00016 RNA-binding protein; Provisional

Probab=97.40  E-value=0.0067  Score=53.10  Aligned_cols=123  Identities=10%  Similarity=0.025  Sum_probs=72.4

Q ss_pred             CceEEEEcccccccccccch-------hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHHHH
Q 025124          107 GGIIINISATLHYTATWYQI-------HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK  179 (257)
Q Consensus       107 ~g~ii~iss~~~~~~~~~~~-------~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~  179 (257)
                      -.++|++||...+.......       ....+|...+.+.+        ..++.+..++|+++..+...... ...+...
T Consensus       157 vkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~sK~~~E~~l~--------~~~l~~~ilRp~~vyG~~~~~~~-~~~~~~~  227 (378)
T PLN00016        157 LKQFLFCSSAGVYKKSDEPPHVEGDAVKPKAGHLEVEAYLQ--------KLGVNWTSFRPQYIYGPGNNKDC-EEWFFDR  227 (378)
T ss_pred             CCEEEEEccHhhcCCCCCCCCCCCCcCCCcchHHHHHHHHH--------HcCCCeEEEeceeEECCCCCCch-HHHHHHH
Confidence            35799999976543211000       01126777776543        34688999999999876432211 1111111


Q ss_pred             hhhhcc---------CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHHHHHHhccC
Q 025124          180 ATDYMA---------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKS  245 (257)
Q Consensus       180 ~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~~~~~~~  245 (257)
                      .....+         ...+.+.+|+++++..++....  ..|+.+++.++..+.     ..++.+.|.+..+.+.
T Consensus       228 ~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~--~~~~~yni~~~~~~s-----~~el~~~i~~~~g~~~  295 (378)
T PLN00016        228 LVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPK--AAGQIFNIVSDRAVT-----FDGMAKACAKAAGFPE  295 (378)
T ss_pred             HHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCcc--ccCCEEEecCCCccC-----HHHHHHHHHHHhCCCC
Confidence            111111         1235679999999999986532  347888888775444     4666777777776654

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=97.38  E-value=0.0068  Score=50.76  Aligned_cols=173  Identities=15%  Similarity=0.039  Sum_probs=96.4

Q ss_pred             eEEEEccCCCHHHHHHHHHHHHHHhCC-ccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           22 AIGLEGDVRKREDAVRVVESTINHFGK-LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        22 ~~~~~~Dls~~~~~~~~~~~~~~~~g~-id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      +..+.+|+.|++++..+++.. +.+.+ +|.++++++...         +..+            ..+.++..+++.+  
T Consensus        41 ~~~~~~d~~d~~~l~~a~~~~-~~~~g~~d~v~~~~~~~~---------~~~~------------~~~~~i~aa~~~g--   96 (285)
T TIGR03649        41 EKHVKFDWLDEDTWDNPFSSD-DGMEPEISAVYLVAPPIP---------DLAP------------PMIKFIDFARSKG--   96 (285)
T ss_pred             CccccccCCCHHHHHHHHhcc-cCcCCceeEEEEeCCCCC---------ChhH------------HHHHHHHHHHHcC--
Confidence            345788999999999888653 22345 899999876321         0111            1123444455544  


Q ss_pred             CCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHHH--
Q 025124          101 QASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS--  178 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~--  178 (257)
                            -.+||++||.....+.+       .+...+.+.+    +   ..|+....++|+++.......... .....  
T Consensus        97 ------v~~~V~~Ss~~~~~~~~-------~~~~~~~~l~----~---~~gi~~tilRp~~f~~~~~~~~~~-~~~~~~~  155 (285)
T TIGR03649        97 ------VRRFVLLSASIIEKGGP-------AMGQVHAHLD----S---LGGVEYTVLRPTWFMENFSEEFHV-EAIRKEN  155 (285)
T ss_pred             ------CCEEEEeeccccCCCCc-------hHHHHHHHHH----h---ccCCCEEEEeccHHhhhhcccccc-cccccCC
Confidence                  46799999865433211       2222222221    1   237899999999887443111000 00000  


Q ss_pred             -Hh-hhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHHHHHHhccCC
Q 025124          179 -KA-TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKSR  246 (257)
Q Consensus       179 -~~-~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (257)
                       .. ........+.+++|+|+++..++..+..  .|..+.+.|+..+.     ..+....+.+..+++..
T Consensus       156 ~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~--~~~~~~l~g~~~~s-----~~eia~~l~~~~g~~v~  218 (285)
T TIGR03649       156 KIYSATGDGKIPFVSADDIARVAYRALTDKVA--PNTDYVVLGPELLT-----YDDVAEILSRVLGRKIT  218 (285)
T ss_pred             eEEecCCCCccCcccHHHHHHHHHHHhcCCCc--CCCeEEeeCCccCC-----HHHHHHHHHHHhCCceE
Confidence             00 0011122468899999999999875422  35566666654443     56667777777776654

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=97.33  E-value=0.0088  Score=54.34  Aligned_cols=194  Identities=13%  Similarity=-0.005  Sum_probs=123.2

Q ss_pred             CCCeEEEEccCCCHHHHHHHHHHHHHHhC--------------CccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHH
Q 025124           19 GIPAIGLEGDVRKREDAVRVVESTINHFG--------------KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF   84 (257)
Q Consensus        19 ~~~~~~~~~Dls~~~~~~~~~~~~~~~~g--------------~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~   84 (257)
                      |..+.++.+++++..+++.+++.|-.+-.              .++.++--|.....+.+.+...+. +..+++.+++..
T Consensus       450 ga~LwvVpaN~~SysDVdAlIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsra-E~~~rilLw~V~  528 (866)
T COG4982         450 GAALWVVPANMGSYSDVDALIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRA-EFAMRILLWNVL  528 (866)
T ss_pred             CceEEEEeccccchhhHHHHHHHhccccccccCCcceecccccCcceeeecccCCccCccccCCchH-HHHHHHHHHHHH
Confidence            45678899999999999999999866321              257788778766666666665543 455666677766


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccccc-ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccc
Q 025124           85 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK  163 (257)
Q Consensus        85 ~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~-~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~  163 (257)
                      .++-.+.++--.++.     ..+-++|.=.|+.  .++ .+.+.|+-+|.+++.+.--+..|-.+...+.+..-..||+.
T Consensus       529 Rliggl~~~~s~r~v-----~~R~hVVLPgSPN--rG~FGgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtr  601 (866)
T COG4982         529 RLIGGLKKQGSSRGV-----DTRLHVVLPGSPN--RGMFGGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTR  601 (866)
T ss_pred             HHHHHhhhhccccCc-----ccceEEEecCCCC--CCccCCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeec
Confidence            666665554333321     1123444444542  222 35688999999999999888777533344555566789998


Q ss_pred             CCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcc-cCc--EEEecCCcccC
Q 025124          164 DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYV-NGN--TLIVDGGNWLS  224 (257)
Q Consensus       164 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~-~G~--~~~~dgg~~~~  224 (257)
                      .+.++...   +..-...++.. -+..+++|++.-++-|++...... -..  ..++.||+...
T Consensus       602 GTGLMg~N---diiv~aiEk~G-V~tyS~~EmA~~LLgL~saev~e~a~~~PI~aDLtGGL~~~  661 (866)
T COG4982         602 GTGLMGHN---DIIVAAIEKAG-VRTYSTDEMAFNLLGLASAEVVELAASSPITADLTGGLGEV  661 (866)
T ss_pred             cccccCCc---chhHHHHHHhC-ceecCHHHHHHHHHhhccHHHHHHHhcCCeEeeccCccccc
Confidence            77665443   22222222222 245689999999999998653332 233  44555887665

>PLN02503 fatty acyl-CoA reductase 2

Probab=97.20  E-value=0.0084  Score=55.50  Aligned_cols=73  Identities=18%  Similarity=0.290  Sum_probs=50.3

Q ss_pred             CCeEEEEccCCCHH------HHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHH
Q 025124           20 IPAIGLEGDVRKRE------DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY   93 (257)
Q Consensus        20 ~~~~~~~~Dls~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   93 (257)
                      .++..+.+|+++++      ..+.+.+       .+|+|||+|+....       .+..+..+++|+.|+.++++.+...
T Consensus       192 ~Ki~~v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f-------~~~~~~a~~vNV~GT~nLLelA~~~  257 (605)
T PLN02503        192 SKLVPVVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTTF-------DERYDVAIDINTRGPCHLMSFAKKC  257 (605)
T ss_pred             ccEEEEEeeCCCcccCCCHHHHHHHHh-------cCCEEEECcccccc-------ccCHHHHHHHHHHHHHHHHHHHHHc
Confidence            46889999999873      2332222       58999999996432       1346678999999999998887542


Q ss_pred             HHhcCCCCCCCCCCceEEEEcccc
Q 025124           94 LKKGGRGQASSSSGGIIINISATL  117 (257)
Q Consensus        94 ~~~~~~~~~~~~~~g~ii~iss~~  117 (257)
                      -   .        -.+++++||..
T Consensus       258 ~---~--------lk~fV~vSTay  270 (605)
T PLN02503        258 K---K--------LKLFLQVSTAY  270 (605)
T ss_pred             C---C--------CCeEEEccCce
Confidence            1   1        23577877754

>PRK12320 hypothetical protein; Provisional

Probab=96.91  E-value=0.048  Score=51.34  Aligned_cols=148  Identities=9%  Similarity=-0.053  Sum_probs=86.2

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      .+.++.+|+++.. +..++       .++|+|||.|+.....            ...+|+.++.++.+++..    .   
T Consensus        41 ~ve~v~~Dl~d~~-l~~al-------~~~D~VIHLAa~~~~~------------~~~vNv~Gt~nLleAA~~----~---   93 (699)
T PRK12320         41 RVDYVCASLRNPV-LQELA-------GEADAVIHLAPVDTSA------------PGGVGITGLAHVANAAAR----A---   93 (699)
T ss_pred             CceEEEccCCCHH-HHHHh-------cCCCEEEEcCccCccc------------hhhHHHHHHHHHHHHHHH----c---
Confidence            4667889998873 33322       3689999999853211            124788888888887743    2   


Q ss_pred             CCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHHHHh
Q 025124          101 QASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA  180 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~  180 (257)
                            +.++|++||..+   .+  ..|.    ..+.+.    .    ..++.+..+.|..+..+.....  .......+
T Consensus        94 ------GvRiV~~SS~~G---~~--~~~~----~aE~ll----~----~~~~p~~ILR~~nVYGp~~~~~--~~r~I~~~  148 (699)
T PRK12320         94 ------GARLLFVSQAAG---RP--ELYR----QAETLV----S----TGWAPSLVIRIAPPVGRQLDWM--VCRTVATL  148 (699)
T ss_pred             ------CCeEEEEECCCC---CC--cccc----HHHHHH----H----hcCCCEEEEeCceecCCCCccc--HhHHHHHH
Confidence                  346999987632   11  1122    122222    1    2347788889988887632211  11111111


Q ss_pred             hhhccCCC---CCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          181 TDYMAAYK---FGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       181 ~~~~~~~~---~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      ......+.   +++.+|++++++.+++..   .+| ++++.+|..+.
T Consensus       149 l~~~~~~~pI~vIyVdDvv~alv~al~~~---~~G-iyNIG~~~~~S  191 (699)
T PRK12320        149 LRSKVSARPIRVLHLDDLVRFLVLALNTD---RNG-VVDLATPDTTN  191 (699)
T ss_pred             HHHHHcCCceEEEEHHHHHHHHHHHHhCC---CCC-EEEEeCCCeeE
Confidence            11111122   358999999999988642   234 89998885544

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=96.55  E-value=0.0053  Score=50.65  Aligned_cols=122  Identities=19%  Similarity=0.119  Sum_probs=84.5

Q ss_pred             CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Q 025124           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (257)
Q Consensus        19 ~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (257)
                      +.+++.+.+|++|...+.++++++     .+|-|.|-++.+...-    +.+.-+.+.+++..|++.+..+..-.-.+  
T Consensus        54 ~~~l~l~~gDLtD~~~l~r~l~~v-----~PdEIYNLaAQS~V~v----SFe~P~~T~~~~~iGtlrlLEaiR~~~~~--  122 (345)
T COG1089          54 DPRLHLHYGDLTDSSNLLRILEEV-----QPDEIYNLAAQSHVGV----SFEQPEYTADVDAIGTLRLLEAIRILGEK--  122 (345)
T ss_pred             CceeEEEeccccchHHHHHHHHhc-----Cchhheeccccccccc----cccCcceeeeechhHHHHHHHHHHHhCCc--
Confidence            346889999999999999999987     7899999998765432    23333457888899999988877543211  


Q ss_pred             CCCCCCCCCceEEEEcccc--c---------ccccccchhhHHHHHHHHHHHHHHHHHhc--CCCCeEEEEEec
Q 025124           99 RGQASSSSGGIIINISATL--H---------YTATWYQIHVSAAKAAVDSITRSLALEWG--TDYAIRVNGIAP  159 (257)
Q Consensus        99 ~~~~~~~~~g~ii~iss~~--~---------~~~~~~~~~Y~~sK~a~~~l~~~la~e~~--~~~gi~v~~v~P  159 (257)
                              .-++..-||..  +         ..|..+.+.|+++|.+..-++...+..++  .-+||-+|.=.|
T Consensus       123 --------~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP  188 (345)
T COG1089         123 --------KTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESP  188 (345)
T ss_pred             --------ccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCC
Confidence                    24455555532  1         12344678999999999988888877654  134566654444

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=96.29  E-value=0.018  Score=46.33  Aligned_cols=182  Identities=14%  Similarity=0.120  Sum_probs=106.4

Q ss_pred             EEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCC
Q 025124           25 LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASS  104 (257)
Q Consensus        25 ~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~  104 (257)
                      +-.|+.|...+++++-.     .+||.+||-.+....-     .+...-...++|+.|..++.+.+..+-.         
T Consensus        92 Iy~DILD~K~L~eIVVn-----~RIdWL~HfSALLSAv-----GE~NVpLA~~VNI~GvHNil~vAa~~kL---------  152 (366)
T KOG2774|consen   92 IYLDILDQKSLEEIVVN-----KRIDWLVHFSALLSAV-----GETNVPLALQVNIRGVHNILQVAAKHKL---------  152 (366)
T ss_pred             hhhhhhccccHHHhhcc-----cccceeeeHHHHHHHh-----cccCCceeeeecchhhhHHHHHHHHcCe---------
Confidence            45677777777666532     3899999987633221     1111223578899999999988765422         


Q ss_pred             CCCceEEEE-ccccccccc------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEE-ecCcccCCCCC--
Q 025124          105 SSGGIIINI-SATLHYTAT------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI-APGPIKDTAGV--  168 (257)
Q Consensus       105 ~~~g~ii~i-ss~~~~~~~------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v-~Pg~v~t~~~~--  168 (257)
                           -+|+ |..++..|.            .....|+.||--.+-+-+.+...+    |+.+.++ .||.+..+.--  
T Consensus       153 -----~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~GEy~~hrF----g~dfr~~rfPg~is~~~pggg  223 (366)
T KOG2774|consen  153 -----KVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAELLGEYFNHRF----GVDFRSMRFPGIISATKPGGG  223 (366)
T ss_pred             -----eEeecccccccCCCCCCCCCCCeeeecCceeechhHHHHHHHHHHHHhhc----CccceecccCcccccCCCCCC
Confidence                 3444 444443321            145679999998888888887655    4655555 35555432110  


Q ss_pred             -CCCChHHHHHHhhhh---ccCC-----CCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHHHH
Q 025124          169 -SKLAPEEIRSKATDY---MAAY-----KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSR  239 (257)
Q Consensus       169 -~~~~~~~~~~~~~~~---~~~~-----~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~  239 (257)
                       ..+....+.+...+.   ..+.     .++.-+|+-..++.++..++..+.-.++++.| +++.     ++....+|++
T Consensus       224 ttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~~~~lkrr~ynvt~-~sft-----pee~~~~~~~  297 (366)
T KOG2774|consen  224 TTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLLAADSQSLKRRTYNVTG-FSFT-----PEEIADAIRR  297 (366)
T ss_pred             cchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHHhCCHHHhhhheeeece-eccC-----HHHHHHHHHh
Confidence             011111122211111   1110     13567888888888887777777788888865 4444     5666776655


Q ss_pred             H
Q 025124          240 A  240 (257)
Q Consensus       240 ~  240 (257)
                      -
T Consensus       298 ~  298 (366)
T KOG2774|consen  298 V  298 (366)
T ss_pred             h
Confidence            3

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=96.20  E-value=0.26  Score=39.85  Aligned_cols=181  Identities=20%  Similarity=0.159  Sum_probs=98.2

Q ss_pred             HHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHH
Q 025124           11 AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA   90 (257)
Q Consensus        11 ~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~   90 (257)
                      ..+.+++.|  ++++.+|..|.+++.+++.       ++|.++++.+...        ...        ......+++++
T Consensus        36 ~~~~l~~~g--~~vv~~d~~~~~~l~~al~-------g~d~v~~~~~~~~--------~~~--------~~~~~~li~Aa   90 (233)
T PF05368_consen   36 RAQQLQALG--AEVVEADYDDPESLVAALK-------GVDAVFSVTPPSH--------PSE--------LEQQKNLIDAA   90 (233)
T ss_dssp             HHHHHHHTT--TEEEES-TT-HHHHHHHHT-------TCSEEEEESSCSC--------CCH--------HHHHHHHHHHH
T ss_pred             hhhhhhccc--ceEeecccCCHHHHHHHHc-------CCceEEeecCcch--------hhh--------hhhhhhHHHhh
Confidence            345556554  4667999999999888876       7899999888543        111        11223344555


Q ss_pred             HHHHHhcCCCCCCCCCCceEEEEccccccccc-----ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCC
Q 025124           91 LKYLKKGGRGQASSSSGGIIINISATLHYTAT-----WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT  165 (257)
Q Consensus        91 ~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~-----~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~  165 (257)
                      ...-.            .++| .||.......     +....| ..|..++.+.+        ..++..+.|+||+....
T Consensus        91 ~~agV------------k~~v-~ss~~~~~~~~~~~~p~~~~~-~~k~~ie~~l~--------~~~i~~t~i~~g~f~e~  148 (233)
T PF05368_consen   91 KAAGV------------KHFV-PSSFGADYDESSGSEPEIPHF-DQKAEIEEYLR--------ESGIPYTIIRPGFFMEN  148 (233)
T ss_dssp             HHHT-------------SEEE-ESEESSGTTTTTTSTTHHHHH-HHHHHHHHHHH--------HCTSEBEEEEE-EEHHH
T ss_pred             hcccc------------ceEE-EEEecccccccccccccchhh-hhhhhhhhhhh--------hccccceeccccchhhh
Confidence            44322            3465 4555443321     112222 34555554443        33788899999988633


Q ss_pred             CCCCCCChH-HHH------HHhhhhccCCCCC-CHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHH
Q 025124          166 AGVSKLAPE-EIR------SKATDYMAAYKFG-EKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQL  237 (257)
Q Consensus       166 ~~~~~~~~~-~~~------~~~~~~~~~~~~~-~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~  237 (257)
                      .. ..+... ...      ...........+. +.+|+++.+..++.++..+-+|..+.+.| ..+.     .++....+
T Consensus       149 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~-~~~t-----~~eia~~~  221 (233)
T PF05368_consen  149 LL-PPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLAG-ETLT-----YNEIAAIL  221 (233)
T ss_dssp             HH-TTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGG-GEEE-----HHHHHHHH
T ss_pred             hh-hhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeCC-CCCC-----HHHHHHHH
Confidence            21 110000 000      0000000001233 78999999999998865544788888765 3444     46777777


Q ss_pred             HHHHhccC
Q 025124          238 SRAVERKS  245 (257)
Q Consensus       238 ~~~~~~~~  245 (257)
                      .+..+++.
T Consensus       222 s~~~G~~v  229 (233)
T PF05368_consen  222 SKVLGKKV  229 (233)
T ss_dssp             HHHHTSEE
T ss_pred             HHHHCCcc
Confidence            77777664

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=96.07  E-value=0.013  Score=57.00  Aligned_cols=125  Identities=17%  Similarity=0.110  Sum_probs=104.6

Q ss_pred             HHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHH
Q 025124           10 SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE   89 (257)
Q Consensus        10 ~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~   89 (257)
                      ..+...+..|..+.+-..|++..+..+.++++..+ ++.+-+++|-|.+.+..-+++.+++.|+..-+..+.|+.++-+.
T Consensus      1811 ~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~k-l~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~ 1889 (2376)
T KOG1202|consen 1811 LMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNK-LGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRV 1889 (2376)
T ss_pred             HHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhh-cccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhh
Confidence            35666777788888888899999999998887644 68899999999999999999999999999999999999988766


Q ss_pred             HHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHH
Q 025124           90 ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE  145 (257)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e  145 (257)
                      -...--+          -..+|.+||.+.-.++.++..|+-+..+++.++..-+.+
T Consensus      1890 sRe~C~~----------LdyFv~FSSvscGRGN~GQtNYG~aNS~MERiceqRr~~ 1935 (2376)
T KOG1202|consen 1890 SREICPE----------LDYFVVFSSVSCGRGNAGQTNYGLANSAMERICEQRRHE 1935 (2376)
T ss_pred             hhhhCcc----------cceEEEEEeecccCCCCcccccchhhHHHHHHHHHhhhc
Confidence            5443222          356899999999999999999999999999999865544

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=96.02  E-value=0.062  Score=43.08  Aligned_cols=167  Identities=16%  Similarity=0.081  Sum_probs=94.0

Q ss_pred             EccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCC--CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCC
Q 025124           26 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAE--DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQAS  103 (257)
Q Consensus        26 ~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~  103 (257)
                      .+|+++.++.++++++.     ++-.+||.|+.... -+.  ....+=|...+++    .-+.++.+..+-.+       
T Consensus        38 d~DLt~~a~t~~lF~~e-----kPthVIhlAAmVGG-lf~N~~ynldF~r~Nl~i----ndNVlhsa~e~gv~-------  100 (315)
T KOG1431|consen   38 DADLTNLADTRALFESE-----KPTHVIHLAAMVGG-LFHNNTYNLDFIRKNLQI----NDNVLHSAHEHGVK-------  100 (315)
T ss_pred             cccccchHHHHHHHhcc-----CCceeeehHhhhcc-hhhcCCCchHHHhhccee----chhHHHHHHHhchh-------
Confidence            59999999999999875     67888888863211 111  1233333333332    22333444333222       


Q ss_pred             CCCCceEEEEcccccc--------------c--ccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCC
Q 025124          104 SSSGGIIINISATLHY--------------T--ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG  167 (257)
Q Consensus       104 ~~~~g~ii~iss~~~~--------------~--~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~  167 (257)
                           ++++..|..-.              .  +.+..-.|+-+|..+.-..++.+++++    -...++-|-.+..|.-
T Consensus       101 -----K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr~idv~n~aY~~qhg----~~~tsviPtNvfGphD  171 (315)
T KOG1431|consen  101 -----KVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQHG----RDYTSVIPTNVFGPHD  171 (315)
T ss_pred             -----hhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHhC----CceeeeccccccCCCC
Confidence                 13333332111              1  223455799999888878888888765    4455666666665533


Q ss_pred             CCCCC-----hHHHH-------------HHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          168 VSKLA-----PEEIR-------------SKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       168 ~~~~~-----~~~~~-------------~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                      .....     +.-+.             ..+....|++.|...+|+|++++|++.+-..   =..+++..|.
T Consensus       172 Nfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i~vlr~Y~~---vEpiils~ge  240 (315)
T KOG1431|consen  172 NFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLFIWVLREYEG---VEPIILSVGE  240 (315)
T ss_pred             CCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHHHHHHHhhcC---ccceEeccCc
Confidence            22211     11111             1123345666788899999999999975322   2556665553

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=95.95  E-value=0.023  Score=48.43  Aligned_cols=53  Identities=13%  Similarity=0.159  Sum_probs=44.0

Q ss_pred             CCCcHHHHHHHHHHHHhcCC----CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC
Q 025124            1 MGRRKTVLRSAVAALHSLGI----PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF   60 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~----~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~   60 (257)
                      .+||+++|+++.+.+.+..+    ...++.||.+|++++.+++.+.       .+|||++|...
T Consensus        39 AGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~-------~vivN~vGPyR   95 (423)
T KOG2733|consen   39 AGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQA-------RVIVNCVGPYR   95 (423)
T ss_pred             ecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhh-------EEEEeccccce
Confidence            48999999999999987742    3348899999999999998854       88999999543

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=95.29  E-value=0.074  Score=43.21  Aligned_cols=74  Identities=9%  Similarity=0.047  Sum_probs=48.9

Q ss_pred             HHHHHHHHhcCCCeEEEEccCC------------CHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHH
Q 025124            9 RSAVAALHSLGIPAIGLEGDVR------------KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVI   76 (257)
Q Consensus         9 ~~~~~~l~~~~~~~~~~~~Dls------------~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~   76 (257)
                      ..+++.+.+.|.++..+..+..            ..++.+++.+.+.+.++.+|++|||||+....+....+.++|..++
T Consensus        30 ~aLA~~L~~~G~~V~li~r~~~~~~~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvsd~~~~~~~~~~~~~~~~  109 (229)
T PRK06732         30 KIIAETFLAAGHEVTLVTTKTAVKPEPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVSDYTPVYMTDLEEVSASD  109 (229)
T ss_pred             HHHHHHHHhCCCEEEEEECcccccCCCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccCCceehhhhhhhhhhhhh
Confidence            4566667677766665532211            0123455556666667789999999998766666677788888887


Q ss_pred             HHHhHH
Q 025124           77 EIDSVG   82 (257)
Q Consensus        77 ~~n~~~   82 (257)
                      ++|...
T Consensus       110 ~v~~~~  115 (229)
T PRK06732        110 NLNEFL  115 (229)
T ss_pred             hhhhhh
Confidence            775543

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=95.05  E-value=0.049  Score=45.13  Aligned_cols=139  Identities=14%  Similarity=0.003  Sum_probs=89.2

Q ss_pred             CccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccc-------
Q 025124           48 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-------  120 (257)
Q Consensus        48 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~-------  120 (257)
                      .+|-++|-|....+..+...+.    +++.+|+.++++....+-+.             +.+++..|+...+.       
T Consensus        91 evD~IyhLAapasp~~y~~npv----ktIktN~igtln~lglakrv-------------~aR~l~aSTseVYgdp~~hpq  153 (350)
T KOG1429|consen   91 EVDQIYHLAAPASPPHYKYNPV----KTIKTNVIGTLNMLGLAKRV-------------GARFLLASTSEVYGDPLVHPQ  153 (350)
T ss_pred             HhhhhhhhccCCCCcccccCcc----ceeeecchhhHHHHHHHHHh-------------CceEEEeecccccCCcccCCC
Confidence            4688888887555433332222    46889999999988877543             45688877754331       


Q ss_pred             ---------ccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCC--CChHHHHHHhhhhc-----
Q 025124          121 ---------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK--LAPEEIRSKATDYM-----  184 (257)
Q Consensus       121 ---------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~-----  184 (257)
                               +....++|.-.|.+.+.|+....++    .||.|...++-.+..|.+...  .....+........     
T Consensus       154 ~e~ywg~vnpigpr~cydegKr~aE~L~~~y~k~----~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~  229 (350)
T KOG1429|consen  154 VETYWGNVNPIGPRSCYDEGKRVAETLCYAYHKQ----EGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVY  229 (350)
T ss_pred             ccccccccCcCCchhhhhHHHHHHHHHHHHhhcc----cCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEE
Confidence                     2224678999999999999887765    468777777766666643221  11222333332222     


Q ss_pred             ----cCCCCCCHHhHHHHHHHhccCCC
Q 025124          185 ----AAYKFGEKWDIAMAALYLASDAG  207 (257)
Q Consensus       185 ----~~~~~~~~~dva~~~~~l~~~~~  207 (257)
                          ....|....|+.+.++.|+..+.
T Consensus       230 g~G~qtRSF~yvsD~Vegll~Lm~s~~  256 (350)
T KOG1429|consen  230 GDGKQTRSFQYVSDLVEGLLRLMESDY  256 (350)
T ss_pred             cCCcceEEEEeHHHHHHHHHHHhcCCC
Confidence                23446778999999999996543

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=94.99  E-value=0.39  Score=51.82  Aligned_cols=143  Identities=13%  Similarity=0.091  Sum_probs=88.5

Q ss_pred             HHHHHHHHHhcCCCeEEEE--------------------ccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCC
Q 025124            8 LRSAVAALHSLGIPAIGLE--------------------GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL   67 (257)
Q Consensus         8 l~~~~~~l~~~~~~~~~~~--------------------~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~   67 (257)
                      ...+++.|.+.|..+..+.                    +.-.+..++..++..+....+.++.+||-.+..... ....
T Consensus      1768 ~~~L~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~l~~~~~~~-~~~~ 1846 (2582)
T TIGR02813      1768 AGVLAEKLIAAGWQVAVVRSPWVVSHSASPLASAIASVTLGTIDDTSIEAVIKDIEEKTAQIDGFIHLQPQHKSV-ADKV 1846 (2582)
T ss_pred             HHHHHHHHHhCCCeEEEeeccccccccccccccccccccccccchHHHHHHHHhhhccccccceEEEeccccccc-cccc
Confidence            3457888888888776552                    112355677788888877788999999977743220 0000


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchh--------hHHHHHHHHHHH
Q 025124           68 SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH--------VSAAKAAVDSIT  139 (257)
Q Consensus        68 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~--------Y~~sK~a~~~l~  139 (257)
                      +.-.+...-...+...|.+.|++.+.+....        .+.++.++...+..+......        -....+++.+|+
T Consensus      1847 ~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~~--------~~~~~~vsr~~G~~g~~~~~~~~~~~~~~~~~~~a~l~Gl~ 1918 (2582)
T TIGR02813      1847 DAIELPEAAKQSLMLAFLFAKLLNVKLATNA--------RASFVTVSRIDGGFGYSNGDADSGTQQVKAELNQAALAGLT 1918 (2582)
T ss_pred             cccccchhhHHHHHHHHHHHHhhchhhccCC--------CeEEEEEEecCCccccCCccccccccccccchhhhhHHHHH
Confidence            0001111112334557777887766555433        578999998876666533221        123578999999


Q ss_pred             HHHHHHhcCCCCeEEEEEecC
Q 025124          140 RSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus       140 ~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      |++++|+. .-.+|...+.|.
T Consensus      1919 Ktl~~E~P-~~~~r~vDl~~~ 1938 (2582)
T TIGR02813      1919 KTLNHEWN-AVFCRALDLAPK 1938 (2582)
T ss_pred             HhHHHHCC-CCeEEEEeCCCC
Confidence            99999997 555666666553

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=94.60  E-value=0.49  Score=39.48  Aligned_cols=158  Identities=15%  Similarity=0.096  Sum_probs=93.9

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (257)
                      +.+.++..|+.|+++++.+++       .-+++||-.|--.+ +.+.         .-++|+.++-.+.+.+-..-.+  
T Consensus       109 GQvl~~~fd~~DedSIr~vvk-------~sNVVINLIGrd~eTknf~---------f~Dvn~~~aerlAricke~GVe--  170 (391)
T KOG2865|consen  109 GQVLFMKFDLRDEDSIRAVVK-------HSNVVINLIGRDYETKNFS---------FEDVNVHIAERLARICKEAGVE--  170 (391)
T ss_pred             cceeeeccCCCCHHHHHHHHH-------hCcEEEEeeccccccCCcc---------cccccchHHHHHHHHHHhhChh--
Confidence            367888999999999999987       45999999995443 2222         2345666665555555333222  


Q ss_pred             CCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCCh--HHH
Q 025124           99 RGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP--EEI  176 (257)
Q Consensus        99 ~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~  176 (257)
                                ++|.+|+.++..  ...+-|=-+|++-+--++.   ++.     ....|.|..+....  +.+..  ..+
T Consensus       171 ----------rfIhvS~Lganv--~s~Sr~LrsK~~gE~aVrd---afP-----eAtIirPa~iyG~e--Drfln~ya~~  228 (391)
T KOG2865|consen  171 ----------RFIHVSCLGANV--KSPSRMLRSKAAGEEAVRD---AFP-----EATIIRPADIYGTE--DRFLNYYASF  228 (391)
T ss_pred             ----------heeehhhccccc--cChHHHHHhhhhhHHHHHh---hCC-----cceeechhhhcccc--hhHHHHHHHH
Confidence                      489999987442  2334455666665544432   221     23557787776431  11110  011


Q ss_pred             HHHhhhhccCCC--------CCCHHhHHHHHHHhccCCCCcccCcEEEecCC
Q 025124          177 RSKATDYMAAYK--------FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG  220 (257)
Q Consensus       177 ~~~~~~~~~~~~--------~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg  220 (257)
                      ... ..-.|+..        ....-|||++|...+.++.  -.|.++..-|-
T Consensus       229 ~rk-~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~--s~Gktye~vGP  277 (391)
T KOG2865|consen  229 WRK-FGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPD--SMGKTYEFVGP  277 (391)
T ss_pred             HHh-cCceeeecCCcceeeccEEEehHHHHHHHhccCcc--ccCceeeecCC
Confidence            111 22233322        2356799999999998764  46888888663

>PF12241 Enoyl_reductase: Trans-2-enoyl-CoA reductase catalytic region; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=94.45  E-value=1.4  Score=35.23  Aligned_cols=143  Identities=17%  Similarity=0.172  Sum_probs=77.9

Q ss_pred             HHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CC--------------------------
Q 025124           11 AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VP--------------------------   63 (257)
Q Consensus        11 ~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~-~~--------------------------   63 (257)
                      +.+..++.|.-...+..|.-+.+--++.++.+++++|++|.||+.-+.+.. .+                          
T Consensus        14 F~~~A~~~Gl~a~~ingDAFS~e~K~~vI~~Ik~~~G~vDLvVYSLAsp~R~~P~tG~~~~S~LKpig~~~t~~tld~~~   93 (237)
T PF12241_consen   14 FEKAAEAAGLYAKSINGDAFSDEMKEQVIELIKEDFGKVDLVVYSLASPRRTDPDTGETYRSVLKPIGEPYTGKTLDTET   93 (237)
T ss_dssp             HHHHHHHTT--EEEEES-TTSHHHHHHHHHHHHHHTS-EEEEEE----SEEE-TTT--EEE----BSSS-EEEEEEETTT
T ss_pred             HHHHHHHCCCeeeecccccCCHHHHHHHHHHHHHhcCCccEEEEeccCCCCCCCCCCCEEeeeeccCCCccccceeecCC
Confidence            344455667778899999999999999999999999999999998542211 11                          


Q ss_pred             -------CCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCc-eEEEEcccccc--cccccchhhHHHHH
Q 025124           64 -------AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGG-IIINISATLHY--TATWYQIHVSAAKA  133 (257)
Q Consensus        64 -------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g-~ii~iss~~~~--~~~~~~~~Y~~sK~  133 (257)
                             +...+.++++.++++  +|-=.+... +..+.+.+.     -+.| +-|-.|=.+..  .|....+..+.+|.
T Consensus        94 ~~~~~~tiepAt~eEi~~TvkV--MGGEDWe~W-i~aL~~Agv-----LA~g~kTvAySYIG~~~T~pIY~~GTiG~AK~  165 (237)
T PF12241_consen   94 DEVSEVTIEPATEEEIENTVKV--MGGEDWELW-IDALKEAGV-----LAEGFKTVAYSYIGPELTWPIYRDGTIGKAKE  165 (237)
T ss_dssp             TEEEEEEE----HHHHHHHHHH--HSSHHHHHH-HHHHHHCT------EEEEEEEEEEEE---GGGCCCCTTCHHHHHHH
T ss_pred             CeEEEEeeCCCCHHHHHhhccc--cCchHHHHH-HHHHHHCCC-----ccCCCEEEEEeccCcccChhhhcCCcHHHHHH
Confidence                   344577888888764  443222222 222333210     0011 11222222211  12234567799999


Q ss_pred             HHHHHHHHHHHHhcCCCCeEE-EEEecCcc
Q 025124          134 AVDSITRSLALEWGTDYAIRV-NGIAPGPI  162 (257)
Q Consensus       134 a~~~l~~~la~e~~~~~gi~v-~~v~Pg~v  162 (257)
                      =++.-+..+..+|. +.|.+. ++|+...|
T Consensus       166 dLe~ta~~i~~~L~-~~~G~A~vsV~KAlV  194 (237)
T PF12241_consen  166 DLEKTAHAINEKLA-AIGGKAYVSVNKALV  194 (237)
T ss_dssp             HHHHHHHHHHHHHH-TTT-EEEEEEE----
T ss_pred             HHHHHHHHHHHHHH-hcCCcEEEEEehhhh
Confidence            99999999999998 656554 45666555

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=93.04  E-value=0.18  Score=44.30  Aligned_cols=50  Identities=20%  Similarity=0.238  Sum_probs=37.5

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN   59 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~   59 (257)
                      ++|+.++++++.+.+  .+.++.++.+|+.|.+++.++++       ..|++||++|..
T Consensus        29 a~r~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~-------~~dvVin~~gp~   78 (386)
T PF03435_consen   29 ADRNPEKAERLAEKL--LGDRVEAVQVDVNDPESLAELLR-------GCDVVINCAGPF   78 (386)
T ss_dssp             EESSHHHHHHHHT----TTTTEEEEE--TTTHHHHHHHHT-------TSSEEEE-SSGG
T ss_pred             EECCHHHHHHHHhhc--cccceeEEEEecCCHHHHHHHHh-------cCCEEEECCccc
Confidence            368899988887776  45789999999999999888876       569999999954

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=90.54  E-value=2.3  Score=38.15  Aligned_cols=79  Identities=14%  Similarity=0.229  Sum_probs=52.0

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++..+.+|+++++---+--+.- .-...+|++||+|+....       .+.++..+.+|..|+..+.+.+.....-   
T Consensus        79 ~Kv~pi~GDi~~~~LGis~~D~~-~l~~eV~ivih~AAtvrF-------de~l~~al~iNt~Gt~~~l~lak~~~~l---  147 (467)
T KOG1221|consen   79 EKVVPIAGDISEPDLGISESDLR-TLADEVNIVIHSAATVRF-------DEPLDVALGINTRGTRNVLQLAKEMVKL---  147 (467)
T ss_pred             ecceeccccccCcccCCChHHHH-HHHhcCCEEEEeeeeecc-------chhhhhhhhhhhHhHHHHHHHHHHhhhh---
Confidence            46788999998765322211111 112379999999995432       2345678899999999999988665443   


Q ss_pred             CCCCCCCCceEEEEcccc
Q 025124          100 GQASSSSGGIIINISATL  117 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~  117 (257)
                              ..++.+|...
T Consensus       148 --------~~~vhVSTAy  157 (467)
T KOG1221|consen  148 --------KALVHVSTAY  157 (467)
T ss_pred             --------heEEEeehhh
Confidence                    2377777643

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=90.46  E-value=5.1  Score=31.36  Aligned_cols=148  Identities=11%  Similarity=-0.042  Sum_probs=81.4

Q ss_pred             eEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCC
Q 025124           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ  101 (257)
Q Consensus        22 ~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  101 (257)
                      +..++.|+.|++++.+.+.       +.|+||..-|.......        +.+.+        -.++++..++...   
T Consensus        43 ~~i~q~Difd~~~~a~~l~-------g~DaVIsA~~~~~~~~~--------~~~~k--------~~~~li~~l~~ag---   96 (211)
T COG2910          43 VTILQKDIFDLTSLASDLA-------GHDAVISAFGAGASDND--------ELHSK--------SIEALIEALKGAG---   96 (211)
T ss_pred             ceeecccccChhhhHhhhc-------CCceEEEeccCCCCChh--------HHHHH--------HHHHHHHHHhhcC---
Confidence            4567888888888765554       78999999887643211        11111        1455555555544   


Q ss_pred             CCCCCCceEEEEccccccccc--------cc-chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCC
Q 025124          102 ASSSSGGIIINISATLHYTAT--------WY-QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA  172 (257)
Q Consensus       102 ~~~~~~g~ii~iss~~~~~~~--------~~-~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~  172 (257)
                           ..|++.++..+++.-.        |. ...|-..-.+.--+...|+.+    .++.-+-|.|..+..|.-....-
T Consensus        97 -----v~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~----~~l~WTfvSPaa~f~PGerTg~y  167 (211)
T COG2910          97 -----VPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALAQAEFLDSLRAE----KSLDWTFVSPAAFFEPGERTGNY  167 (211)
T ss_pred             -----CeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHHHHHHHHHHhhc----cCcceEEeCcHHhcCCccccCce
Confidence                 5778888876655321        11 123433333333444555554    24778888998888773222110


Q ss_pred             hHHHHHHhhhhccCCCCCCHHhHHHHHHHhccC
Q 025124          173 PEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (257)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  205 (257)
                      . --.+.+.-...-...++.+|.|-+++.-+..
T Consensus       168 r-lggD~ll~n~~G~SrIS~aDYAiA~lDe~E~  199 (211)
T COG2910         168 R-LGGDQLLVNAKGESRISYADYAIAVLDELEK  199 (211)
T ss_pred             E-eccceEEEcCCCceeeeHHHHHHHHHHHHhc
Confidence            0 0000011111112457889999888887754

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=88.72  E-value=0.89  Score=38.32  Aligned_cols=51  Identities=18%  Similarity=0.076  Sum_probs=36.9

Q ss_pred             CCcH---HHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC
Q 025124            2 GRRK---TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN   59 (257)
Q Consensus         2 ~r~~---~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~   59 (257)
                      +|+.   ++++++.+++.+.+..+.+..+|+++.+++...++       ..|+||||..+.
T Consensus       157 ~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~-------~~DilINaTp~G  210 (289)
T PRK12548        157 NIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA-------SSDILVNATLVG  210 (289)
T ss_pred             eCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc-------cCCEEEEeCCCC
Confidence            5665   77888888887655566677789887777665443       469999998644

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=88.28  E-value=1.9  Score=38.12  Aligned_cols=52  Identities=19%  Similarity=0.075  Sum_probs=36.7

Q ss_pred             HHHHHHHHHhcCCCeEEE-------------EccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCC
Q 025124            8 LRSAVAALHSLGIPAIGL-------------EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV   62 (257)
Q Consensus         8 l~~~~~~l~~~~~~~~~~-------------~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~   62 (257)
                      ...++.++.+.|.++.++             .+|+++.+++.+.+.   +.++++|++|||||+....
T Consensus       217 G~aiA~~l~~~Ga~V~~v~~~~~~~~~~~~~~~dv~~~~~~~~~v~---~~~~~~DilI~~Aav~d~~  281 (399)
T PRK05579        217 GYALARAAARRGADVTLVSGPVNLPTPAGVKRIDVESAQEMLDAVL---AALPQADIFIMAAAVADYR  281 (399)
T ss_pred             HHHHHHHHHHCCCEEEEeCCCccccCCCCcEEEccCCHHHHHHHHH---HhcCCCCEEEEcccccccc
Confidence            445677777777666433             467887777665554   5678999999999976543

>PLN00106 malate dehydrogenase

Probab=86.81  E-value=5.9  Score=33.99  Aligned_cols=97  Identities=11%  Similarity=0.023  Sum_probs=60.5

Q ss_pred             HHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccc----c
Q 025124           44 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH----Y  119 (257)
Q Consensus        44 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~----~  119 (257)
                      +.+...|++|+.||.....      ...++..+..|+.....+.+.+    .+...       .+.++++|.+..    .
T Consensus        82 ~~l~~aDiVVitAG~~~~~------g~~R~dll~~N~~i~~~i~~~i----~~~~p-------~aivivvSNPvD~~~~i  144 (323)
T PLN00106         82 DALKGADLVIIPAGVPRKP------GMTRDDLFNINAGIVKTLCEAV----AKHCP-------NALVNIISNPVNSTVPI  144 (323)
T ss_pred             HHcCCCCEEEEeCCCCCCC------CCCHHHHHHHHHHHHHHHHHHH----HHHCC-------CeEEEEeCCCccccHHH
Confidence            3456899999999975431      1235667777877755555554    43331       466777777664    2


Q ss_pred             --------cccccchhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEE
Q 025124          120 --------TATWYQIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGI  157 (257)
Q Consensus       120 --------~~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~~gi~v~~v  157 (257)
                              .+.+..-.|+.++.-...|-..++.++. .+..|+...+
T Consensus       145 ~t~~~~~~s~~p~~~viG~~~LDs~Rl~~~lA~~lgv~~~~V~~~Vi  191 (323)
T PLN00106        145 AAEVLKKAGVYDPKKLFGVTTLDVVRANTFVAEKKGLDPADVDVPVV  191 (323)
T ss_pred             HHHHHHHcCCCCcceEEEEecchHHHHHHHHHHHhCCChhheEEEEE
Confidence                    2234455788888777788888888876 2334444433

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=83.61  E-value=11  Score=33.34  Aligned_cols=74  Identities=11%  Similarity=-0.043  Sum_probs=42.7

Q ss_pred             HHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHH--HHHHHHhcCCCCeEE
Q 025124           77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT--RSLALEWGTDYAIRV  154 (257)
Q Consensus        77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~--~~la~e~~~~~gi~v  154 (257)
                      ++...|..++++++...-            =.++++++++.+-........+..   ....+.  +.....+. ..|+.-
T Consensus       175 ~VD~~g~knlvdA~~~aG------------vk~~vlv~si~~~~~~~~~~~~~~---~~~~~~~k~~~e~~~~-~Sgl~y  238 (411)
T KOG1203|consen  175 KVDYEGTKNLVDACKKAG------------VKRVVLVGSIGGTKFNQPPNILLL---NGLVLKAKLKAEKFLQ-DSGLPY  238 (411)
T ss_pred             eecHHHHHHHHHHHHHhC------------CceEEEEEeecCcccCCCchhhhh---hhhhhHHHHhHHHHHH-hcCCCc
Confidence            344556677777763322            245999999877665554444332   111111  12223334 678888


Q ss_pred             EEEecCcccCCC
Q 025124          155 NGIAPGPIKDTA  166 (257)
Q Consensus       155 ~~v~Pg~v~t~~  166 (257)
                      ..|.||......
T Consensus       239 tiIR~g~~~~~~  250 (411)
T KOG1203|consen  239 TIIRPGGLEQDT  250 (411)
T ss_pred             EEEeccccccCC
Confidence            999999887643

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=81.29  E-value=3.7  Score=36.21  Aligned_cols=54  Identities=19%  Similarity=0.106  Sum_probs=36.9

Q ss_pred             HHHHHHHHHhcCCCeEEE-------------EccCCCHHHH-HHHHHHHHHHhCCccEEEeCCCCCCCCCC
Q 025124            8 LRSAVAALHSLGIPAIGL-------------EGDVRKREDA-VRVVESTINHFGKLDILVNAAAGNFLVPA   64 (257)
Q Consensus         8 l~~~~~~l~~~~~~~~~~-------------~~Dls~~~~~-~~~~~~~~~~~g~id~li~~ag~~~~~~~   64 (257)
                      ...+++++...|.++.++             .+|+++.+++ +.++++   .++++|++|+|||+....+.
T Consensus       214 g~~~a~~~~~~Ga~V~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~---~~~~~D~~i~~Aavsd~~~~  281 (390)
T TIGR00521       214 GLALAEAAYKRGADVTLITGPVSLLTPPGVKSIKVSTAEEMLEAALNE---LAKDFDIFISAAAVADFKPK  281 (390)
T ss_pred             HHHHHHHHHHCCCEEEEeCCCCccCCCCCcEEEEeccHHHHHHHHHHh---hcccCCEEEEcccccccccc
Confidence            345677777777665543             4777887777 545434   34689999999998765443

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	257
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		4e-33
3imf_A	257	1.99 Angstrom Resolution Crystal Structure Of A Sho		8e-32
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		1e-21
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		2e-21
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		2e-21
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		3e-21
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		4e-21
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		4e-21
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		4e-21
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		4e-21
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		2e-20
1w6u_A	302	Structure Of Human Decr Ternary Complex Length = 30		2e-19
1w73_A	302	Binary Structure Of Human Decr Solved By Semet Sad.		3e-19
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		1e-16
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		3e-16
1yde_A	270	Crystal Structure Of Human Retinal Short-Chain Dehy		7e-16
2bgk_A	278	X-Ray Structure Of Apo-Secoisolariciresinol Dehydro		4e-13
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		4e-13
4fgs_A	273	Crystal Structure Of A Probable Dehydrogenase Prote		8e-13
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		8e-13
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		9e-13
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		9e-13
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		9e-13
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		2e-12
1uls_A	245	Crystal Structure Of Tt0140 From Thermus Thermophil		2e-12
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		2e-12
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		3e-12
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		3e-12
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		4e-12
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		4e-12
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-12
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		6e-12
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		6e-12
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		1e-11
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		2e-11
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		3e-11
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		7e-11
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		8e-11
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		8e-11
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		1e-10
3gdf_A	267	Crystal Structure Of The Nadp-Dependent Mannitol De		2e-10
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		2e-10
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		2e-10
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		3e-10
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		3e-10
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		4e-10
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		8e-10
1ja9_A	274	Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen		8e-10
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		1e-09
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		1e-09
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		1e-09
1nfr_A	260	Rv2002 Gene Product From Mycobacterium Tuberculosis		1e-09
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		2e-09
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		2e-09
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		2e-09
1h5q_A	265	Mannitol Dehydrogenase From Agaricus Bisporus Lengt		3e-09
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		3e-09
2ag5_A	246	Crystal Structure Of Human Dhrs6 Length = 246		3e-09
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		4e-09
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		4e-09
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-09
3svt_A	281	Structure Of A Short-Chain Type DehydrogenaseREDUCT		4e-09
2wdz_A	254	Crystal Structure Of The Short Chain Dehydrogenase		4e-09
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		5e-09
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		6e-09
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		6e-09
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		7e-09
1x1e_A	239	Crystal Structure Of Tt0495 Protein From Thermus Th		7e-09
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		1e-08
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		1e-08
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		1e-08
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		1e-08
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		1e-08
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		2e-08
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		2e-08
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		3e-08
3r3s_A	294	Structure Of The Ygha Oxidoreductase From Salmonell		4e-08
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-08
2ptg_A	319	Crystal Structure Of Eimeria Tenella Enoyl Reductas		5e-08
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-08
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		5e-08
3uve_A	286	Crystal Structure Of Carveol Dehydrogenase ((+)-Tra		5e-08
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		6e-08
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		8e-08
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		8e-08
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		9e-08
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		1e-07
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		1e-07
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		1e-07
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		1e-07
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		1e-07
2o2s_A	315	The Structure Of T. Gondii Enoyl Acyl Carrier Prote		1e-07
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		1e-07
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		2e-07
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		2e-07
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		2e-07
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-07
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		2e-07
2o50_A	315	The Crystal Structure Of Toxoplasma Gondii Enoyl Ac		2e-07
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-07
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		4e-07
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		4e-07
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		4e-07
1pr9_A	244	Human L-Xylulose Reductase Holoenzyme Length = 244		4e-07
3d3w_A	244	Structure Of L-Xylulose Reductase With Bound Coenzy		4e-07
3f4b_A	323	Crystal Structure Of Plasmodium Berghei Enoyl-Acyl-		5e-07
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		5e-07
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		6e-07
3d3w_B	245	Structure Of L-Xylulose Reductase With Bound Coenzy		7e-07
3t7c_A	299	Crystal Structure Of Carveol Dehydrogenase From Myc		8e-07
3edm_A	259	Crystal Structure Of A Short Chain Dehydrogenase Fr		8e-07
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		8e-07
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		1e-06
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		1e-06
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		1e-06
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		1e-06
3uwr_A	286	Crystal Structure Of Carveol Dehydrogenase From Myc		2e-06
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		2e-06
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		2e-06
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		3e-06
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		3e-06
1hxh_A	253	Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D		3e-06
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		3e-06
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		3e-06
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		3e-06
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		3e-06
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		4e-06
3pxx_A	287	Crystal Structure Of Carveol Dehydrogenase From Myc		4e-06
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		4e-06
2xox_A	288	Crystal Structure Of Pteridine Reductase (Ptr1) Fro		4e-06
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		5e-06
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		5e-06
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		7e-06
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		8e-06
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		8e-06
1o5i_A	249	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		8e-06
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		9e-06
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		1e-05
2a4k_A	263	3-Oxoacyl-[acyl Carrier Protein] Reductase From The		1e-05
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		2e-05
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		2e-05
1p33_A	289	Pteridine Reductase From Leishmania Tarentolae Comp		3e-05
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		3e-05
1mxf_A	276	Crystal Structure Of Inhibitor Complex Of Putative		3e-05
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		4e-05
1w0c_A	307	Inhibition Of Leishmania Major Pteridine Reductase		4e-05
2qhx_A	328	Structure Of Pteridine Reductase From Leishmania Ma		4e-05
1e92_A	288	Pteridine Reductase 1 From Leishmania Major Complex		5e-05
1e7w_A	291	One Active Site, Two Modes Of Reduction Correlate T		5e-05
4dyv_A	272	Crystal Structure Of A Short-Chain DehydrogenaseRED		6e-05
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		6e-05
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		6e-05
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		6e-05
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		6e-05
1mxh_A	276	Crystal Structure Of Substrate Complex Of Putative		7e-05
4iiu_A	267	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		9e-05
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		9e-05
3bmc_B	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		9e-05
3jq7_B	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		9e-05
2wd7_A	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		1e-04
2wd7_B	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		1e-04
2o2y_A	349	The Crystal Structure Of P. Falciparum Enoyl Acyl C		1e-04
3am3_A	329	A372m Mutant Of Enoyl-Acp Reductase From Plasmodium		1e-04
1vrw_A	336	Crystal Structure Analysis Of Plasmodium Falciparum		1e-04
3jq7_A	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		1e-04
4gkb_A	258	Crystal Structure Of A Short Chain Dehydrogenase Ho		1e-04
3bmc_A	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		1e-04
2c7v_A	268	Structure Of Trypanosoma Brucei Pteridine Reductase		1e-04
2y93_A	281	Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2		2e-04
2ol4_A	338	Crystal Structure Of Plasmodium Falciparum Enoyl Ac		2e-04
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		2e-04
4egf_A	266	Crystal Structure Of A L-Xylulose Reductase From My		2e-04
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		2e-04
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		2e-04
1uh5_A	329	Crystal Structure Of Enoyl-Acp Reductase With Tricl		3e-04
2foi_A	269	Synthesis, Biological Activity, And X-Ray Crystal S		3e-04
1nhg_A	229	Crystal Structure Analysis Of Plasmodium Falciparum		4e-04
2pd3_A	275	Crystal Structure Of The Helicobacter Pylori Enoyl-		4e-04
4da9_A	280	Crystal Structure Of Putative Short-Chain Dehydroge		4e-04
3ged_A	247	Fingerprint And Structural Analysis Of A Apo Scor E		4e-04
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		4e-04
2fwm_X	250	Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih		4e-04
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		4e-04
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		4e-04
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		5e-04
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		5e-04
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		5e-04
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		6e-04
4e4y_A	244	The Crystal Structure Of A Short Chain Dehydrogenas		6e-04
3ksu_A	262	Crystal Structure Of Short-Chain Dehydrogenase From		7e-04
3e03_A	274	Crystal Structure Of A Putative Dehydrogenase From		7e-04
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		8e-04
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		8e-04
4all_A	277	Crystal Structure Of S. Aureus Fabi In Complex With		8e-04
4ali_A	282	Crystal Structure Of S. Aureus Fabi In Complex With		8e-04
3gns_A	260	Crystal Structure Of The Staphylococcus Aureus Enoy		8e-04
4fs3_A	256	Crystal Structure Of Staphylococcus Aureus Enoyl-Ac		8e-04
3gnt_A	256	Crystal Structure Of The Staphylococcus Aureus Enoy		8e-04

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score =  137 bits (346), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 81/203 (39%), Positives = 107/203 (52%), Gaps = 10/203 (4%)
Query: 25  LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 84
           L  DVR     +  V+  +  FG++DIL+N AAGNFL PA  LS N F+TV++ID+ GTF
Sbjct: 82  LSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTF 141
Query: 85  IMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
                    + +                  ATL       Q+H  +AKAAVD++TR LA+
Sbjct: 142 --------NVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAV 193
Query: 145 EWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLA 203
           EWG    IRVN +APGPI  T G+ +L  P+   S         + G K +IA + LYLA
Sbjct: 194 EWGPQN-IRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYLA 252
Query: 204 SDAGKYVNGNTLIVDGGNWLSNP 226
           S    YV G  L+ DGG WL+ P
Sbjct: 253 SPLASYVTGAVLVADGGAWLTFP 275

>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257

Iteration: 1
 Score =  133 bits (335), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 88/224 (39%), Positives = 116/224 (51%), Gaps = 10/224 (4%)
Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
           GR K  L  A   +       + ++ DVR  +D  + +E     FG++DIL+N AAGNF+
Sbjct: 37  GRTKEKLEEAKLEIEQFPGQILTVQXDVRNTDDIQKXIEQIDEKFGRIDILINNAAGNFI 96
Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEAL-KYLKKXXXXXXXXXXXXXXXXXXATLHYT 120
            PAEDLS NG+ +VI I   GTF  C +A+ KY  +                  AT  + 
Sbjct: 97  CPAEDLSVNGWNSVINIVLNGTF-YCSQAIGKYWIE-------KGIKGNIINXVATYAWD 148
Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSK 179
           A    IH +AAKA V + T++LA+EWG  Y IRVN IAPGPI+ T G  KL   EE   +
Sbjct: 149 AGPGVIHSAAAKAGVLAXTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEXAKR 208
Query: 180 ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 223
               +   + G   +IA  A YL SD   Y+NG     DGG  L
Sbjct: 209 TIQSVPLGRLGTPEEIAGLAYYLCSDEAAYINGTCXTXDGGQHL 252

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score = 99.8 bits (247), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 103/216 (47%), Gaps = 10/216 (4%)
Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS 68
            S +  +  +G  AI ++GDV    D + +V+S I  FGKLD+++N A     V + ++S
Sbjct: 46  NSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMS 105
Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATW-YQIH 127
            + +  VI+ +  G F+   EA+KY  +                  +++H    W   +H
Sbjct: 106 LSDWNKVIDTNLTGAFLGSREAIKYFVE--------NDIKGTVINMSSVHEKIPWPLFVH 157
Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 187
            +A+K  +  +T++LALE+     IRVN I PG I       K A  E R+     +   
Sbjct: 158 YAASKGGMKLMTKTLALEYAPK-GIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMG 216
Query: 188 KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 223
             GE  +IA  A +LAS    YV G TL  DGG  L
Sbjct: 217 YIGEPEEIAAVAAWLASSEASYVTGITLFADGGMTL 252

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 101/213 (47%), Gaps = 10/213 (4%)
Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS 68
            S +  +  +G  AI ++GDV    D + +V+S I  FGKLD+++N A     V + ++S
Sbjct: 46  NSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMS 105
Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATW-YQIH 127
            + +  VI+ +  G F+   EA+KY  +                  +++H    W   +H
Sbjct: 106 LSDWNKVIDTNLTGAFLGSREAIKYFVE--------NDIKGTVINMSSVHEKIPWPLFVH 157
Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 187
            +A+K  +  +T +LALE+     IRVN I PG I       K A  E R+     +   
Sbjct: 158 YAASKGGMKLMTETLALEYAPK-GIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMG 216
Query: 188 KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             GE  +IA  A +LAS    YV G TL  DGG
Sbjct: 217 YIGEPEEIAAVAAWLASSEASYVTGITLFADGG 249

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score = 99.0 bits (245), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 102/216 (47%), Gaps = 10/216 (4%)
Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS 68
            S +  +  +G  AI ++GDV    D + +V+S I  FGKLD+++N A     V + ++S
Sbjct: 46  NSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMS 105
Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATW-YQIH 127
            + +  VI+ +  G F+   EA+KY  +                  +++H    W   +H
Sbjct: 106 LSDWNKVIDTNLTGAFLGSREAIKYFVE--------NDIKGTVINMSSVHEKIPWPLFVH 157
Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 187
            +A+K  +  +T +LALE+     IRVN I PG I       K A  E R+     +   
Sbjct: 158 YAASKGGMKLMTETLALEYAPK-GIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMG 216
Query: 188 KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 223
             GE  +IA  A +LAS    YV G TL  DGG  L
Sbjct: 217 YIGEPEEIAAVAAWLASSEASYVTGITLFADGGMTL 252

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score = 98.2 bits (243), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 101/213 (47%), Gaps = 10/213 (4%)
Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS 68
            S +  +  +G  AI ++GDV    D + +V+S I  FGKLD+++N A     V + ++S
Sbjct: 46  NSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLANPVSSHEMS 105
Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATW-YQIH 127
            + +  VI+ +  G F+   EA+KY  +                  +++H    W   +H
Sbjct: 106 LSDWNKVIDTNLTGAFLGSREAIKYFVE--------NDIKGTVINMSSVHEKIPWPLFVH 157
Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 187
            +A+K  +  +T +LALE+     IRVN I PG I       K A  E R+     +   
Sbjct: 158 YAASKGGMKLMTETLALEYAPK-GIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMG 216
Query: 188 KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             GE  +IA  A +LAS    YV G TL  DGG
Sbjct: 217 YIGEPEEIAAVAAWLASSEASYVTGITLFADGG 249

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 98.2 bits (243), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 106/212 (50%), Gaps = 19/212 (8%)
Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 78
           G+  +    DV   E+  +++E+    FGKLD +VNAA  N   PAE+   + FR VIE+
Sbjct: 70  GVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEV 129
Query: 79  DSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSI 138
           +  GT+ +C EA   L++                   T+   + +     +A+K  V S+
Sbjct: 130 NLFGTYYVCREAFSLLRE--SDNPSIINIGSLTVEEVTMPNISAY-----AASKGGVASL 182
Query: 139 TRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAY----KFGEKW 193
           T++LA EWG  Y IRVN IAPG  +     +  + PE++     DYM       + G   
Sbjct: 183 TKALAKEWGR-YGIRVNVIAPGWYRTKMTEAVFSDPEKL-----DYMLKRIPLGRTGVPE 236
Query: 194 DIAMAALYLASDAGKYVNGNTLIVDGGNWLSN 225
           D+   A++LAS+  KYV G  + VDGG W +N
Sbjct: 237 DLKGVAVFLASEEAKYVTGQIIFVDGG-WTAN 267

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score = 98.2 bits (243), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 98/203 (48%), Gaps = 10/203 (4%)
Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 78
           G  AI ++GDV K ED V +V++ I  FG LD+++N A     VP+ +LS + +  VI+ 
Sbjct: 64  GGQAIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVIDT 123
Query: 79  DSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATW-YQIHVSAAKAAVDS 137
           +  G F+   EA+KY  +                  +++H    W   +H +A+K  +  
Sbjct: 124 NLTGAFLGSREAIKYFVE--------NDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKL 175
Query: 138 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 197
           +T +LALE+     IRVN I PG +       K A    R+     +     G+  ++A 
Sbjct: 176 MTETLALEYAPK-GIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVAA 234
Query: 198 AALYLASDAGKYVNGNTLIVDGG 220
            A +LAS    YV G TL  DGG
Sbjct: 235 VAAFLASSQASYVTGITLFADGG 257

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score = 98.2 bits (243), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 98/203 (48%), Gaps = 10/203 (4%)
Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 78
           G  AI ++GDV K ED V +V++ I  FG LD+++N A     VP+ +LS + +  VI+ 
Sbjct: 64  GGQAIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVIDT 123
Query: 79  DSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATW-YQIHVSAAKAAVDS 137
           +  G F+   EA+KY  +                  +++H    W   +H +A+K  +  
Sbjct: 124 NLTGAFLGSREAIKYFVE--------NDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKL 175
Query: 138 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 197
           +T +LALE+     IRVN I PG +       K A    R+     +     G+  ++A 
Sbjct: 176 MTETLALEYAPK-GIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVAA 234
Query: 198 AALYLASDAGKYVNGNTLIVDGG 220
            A +LAS    YV G TL  DGG
Sbjct: 235 VAAFLASSQASYVTGITLFADGG 257

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score = 98.2 bits (243), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 98/203 (48%), Gaps = 10/203 (4%)
Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 78
           G  AI ++GDV K ED V +V++ I  FG LD+++N A     VP+ +LS + +  VI+ 
Sbjct: 64  GGQAIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVIDT 123
Query: 79  DSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATW-YQIHVSAAKAAVDS 137
           +  G F+   EA+KY  +                  +++H    W   +H +A+K  +  
Sbjct: 124 NLTGAFLGSREAIKYFVE--------NDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKL 175
Query: 138 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 197
           +T +LALE+     IRVN I PG +       K A    R+     +     G+  ++A 
Sbjct: 176 MTETLALEYAPK-GIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVAA 234
Query: 198 AALYLASDAGKYVNGNTLIVDGG 220
            A +LAS    YV G TL  DGG
Sbjct: 235 VAAFLASSQASYVTGITLFADGG 257

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 14/201 (6%)
Query: 23  IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 82
           I ++ ++R  E+   +V+ST++ FGK++ LVN   G FL PAE +S  G+  V+E +  G
Sbjct: 75  IPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTG 134
Query: 83  TFIMCHEAL-KYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRS 141
           TF MC      ++K+                  A          +H  AA+A V ++T+S
Sbjct: 135 TFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLA----------VHSGAARAGVYNLTKS 184
Query: 142 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP--EEIRSKATDYMAAYKFGEKWDIAMAA 199
           LALEW     IR+N +APG I     V       +     +   + A + G   +++   
Sbjct: 185 LALEWACS-GIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVV 243
Query: 200 LYLASDAGKYVNGNTLIVDGG 220
            +L S A  ++ G ++ VDGG
Sbjct: 244 CFLLSPAASFITGQSVDVDGG 264

>pdb|1W6U|A Chain A, Structure Of Human Decr Ternary Complex Length = 302

Iteration: 1
 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 103/220 (46%), Gaps = 10/220 (4%)
Query: 3   RRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
           R+  VL++    + S  G     ++ DVR  +     V   I   G  +I++N AAGNF+
Sbjct: 58  RKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFI 117
Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTA 121
            P E LSPN ++T+ +I   GT  +  E  K L K                       T 
Sbjct: 118 SPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAE-------TG 170
Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE-EIRSKA 180
           + + +  ++AKA V+++++SLA EWG  Y +R N I PGPIK     S+L P      + 
Sbjct: 171 SGFVVPSASAKAGVEAMSKSLAAEWG-KYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEM 229
Query: 181 TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
              +   + G   ++A  A +L SD   ++NG  +  DGG
Sbjct: 230 IGRIPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGG 269

>pdb|1W73|A Chain A, Binary Structure Of Human Decr Solved By Semet Sad. Length = 302

Iteration: 1
 Score = 91.7 bits (226), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 104/221 (47%), Gaps = 12/221 (5%)
Query: 3   RRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
           R+  VL++    + S  G     ++ DVR  +     V   I   G  +I++N AAGNF+
Sbjct: 58  RKXDVLKATAEQISSQTGNKVHAIQCDVRDPDXVQNTVSELIKVAGHPNIVINNAAGNFI 117
Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLH-YT 120
            P E LSPN ++T+ +I   GT  +  E  K L K                   T++  T
Sbjct: 118 SPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIK--------AQKGAAFLSITTIYAET 169
Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE-EIRSK 179
            + + +  ++AKA V++ ++SLA EWG  Y  R N I PGPIK     S+L P      +
Sbjct: 170 GSGFVVPSASAKAGVEAXSKSLAAEWG-KYGXRFNVIQPGPIKTKGAFSRLDPTGTFEKE 228
Query: 180 ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
               +   + G   ++A  A +L SD   ++NG  +  DGG
Sbjct: 229 XIGRIPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGG 269

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 99/209 (47%), Gaps = 17/209 (8%)
Query: 15  LHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNG 71
           +  LG  AI +  DV   ED   +V+ T++ FG++DILVN A     N L+    +    
Sbjct: 49  IKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMR---MKEEE 105
Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAA 131
           + TVI  +  G F+      +++ +                  + +  T    Q +  AA
Sbjct: 106 WDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIA--------SVVGVTGNPGQANYVAA 157
Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 191
           KA V  +T++ A E  +   I VN IAPG I     ++ +  E I+++    + A +FGE
Sbjct: 158 KAGVIGLTKTSAKELAS-RNITVNAIAPGFI--ATDMTDVLDENIKAEMLKLIPAAQFGE 214
Query: 192 KWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             DIA A  + ASD  KY+ G TL VDGG
Sbjct: 215 AQDIANAVTFFASDQSKYITGQTLNVDGG 243

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 100/208 (48%), Gaps = 11/208 (5%)
Query: 13  AALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGF 72
           AA+   G  AIGLE +V   +    V+++ ++ FGK+ +LVN A G    P  D+  + F
Sbjct: 54  AAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPF-DMPMSDF 112
Query: 73  RTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAK 132
               +++    F +   A  +++K                    +   A++      ++K
Sbjct: 113 EWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRM---ASY-----GSSK 164
Query: 133 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEK 192
           AAV+ +TR++A + G    IRVN IAPG IK  A  + L PE I      +    + GE 
Sbjct: 165 AAVNHLTRNIAFDVGP-MGIRVNAIAPGAIKTDALATVLTPE-IERAMLKHTPLGRLGEA 222
Query: 193 WDIAMAALYLASDAGKYVNGNTLIVDGG 220
            DIA AAL+L S A  +++G  L V GG
Sbjct: 223 QDIANAALFLCSPAAAWISGQVLTVSGG 250

>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270

Iteration: 1
 Score = 80.9 bits (198), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 106/218 (48%), Gaps = 28/218 (12%)
Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA--EDLSPNGFRTVIEIDSVGTFI 85
           DV + +D   +V  TI  FG+LD +VN A G+   P   E+ S  GFR ++E++ +GT+ 
Sbjct: 62  DVTQEDDVKTLVSETIRRFGRLDCVVNNA-GHHPPPQRPEETSAQGFRQLLELNLLGTYT 120
Query: 86  MCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALE 145
           +   AL YL+K                    + Y AT         K AV ++T++LAL+
Sbjct: 121 LTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVAT---------KGAVTAMTKALALD 171
Query: 146 WGTDYAIRVNGIAPGPIKDT--AGVSKLAPEEIRSKATDYMAAY---KFGEKWDIAMAAL 200
             + Y +RVN I+PG I       ++ L P+  R+   + M A    + G+  ++  AA+
Sbjct: 172 E-SPYGVRVNCISPGNIWTPLWEELAALMPDP-RASIREGMLAQPLGRMGQPAEVGAAAV 229
Query: 201 YLASDAGKYVNGNTLIVDGGNWL--------SNPRDLP 230
           +LAS+A  +  G  L+V GG  L        S P D P
Sbjct: 230 FLASEA-NFCTGIELLVTGGAELGYGCKASRSTPVDAP 266

>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278

Iteration: 1
 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG--FRTVIEIDSVGTFI 85
           DV K ED   +V++TI   GKLDI+          P   L      F+ V++I+  G F+
Sbjct: 72  DVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFL 131
Query: 86  MCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHV-SAAKAAVDSITRSLAL 144
           +   A + +                        +TA     HV +A K AV  +T SL  
Sbjct: 132 VAKHAARVMIPAKKGSIVFTASISS--------FTAGEGVSHVYTATKHAVLGLTTSLCT 183
Query: 145 EWGTDYAIRVNGIAP----GPI-KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 199
           E G +Y IRVN ++P     P+  D  GV     EE+  +A +        E  D+A A 
Sbjct: 184 ELG-EYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAE--DVADAV 240
Query: 200 LYLASDAGKYVNGNTLIVDGGNWLSNP 226
            YLA D  KYV+G  L++DGG   +NP
Sbjct: 241 AYLAGDESKYVSGLNLVIDGGYTRTNP 267

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 102/222 (45%), Gaps = 15/222 (6%)
Query: 5   KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA 64
           + ++   +AA  + GI A G   DV   +    +V    +  G +DILVN A     VP 
Sbjct: 68  QELVDRGMAAYKAAGINAHGYVCDVTDEDGIQAMVAQIESEVGIIDILVNNAGIIRRVPM 127
Query: 65  EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWY 124
            +++   FR VI+ID    FI+    +  + K                   T+   A   
Sbjct: 128 IEMTAAQFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYA--- 184
Query: 125 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK--DTAGVSKLAPEEIRSKATD 182
                AAK  +  +T+++A E+G +  I+ NGI PG I    TA + +L  +  R     
Sbjct: 185 -----AAKGGLKMLTKNIASEYG-EANIQCNGIGPGYIATPQTAPLRELQKDGSRHPFDQ 238
Query: 183 YM----AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           ++     A ++GE  D+   A++LASDA  +VNG+ L VDGG
Sbjct: 239 FIIAKTPAARWGEAEDLMGPAVFLASDASNFVNGHILYVDGG 280

>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273

Iteration: 1
 Score = 70.9 bits (172), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 19/225 (8%)
Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
           GRRK VL +A+A    +G  A+G++ D     +  R+ E      G++D+L   A G   
Sbjct: 60  GRRKDVLDAAIA---EIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSX 116
Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTA 121
           +P  +++   +    + +  G      +AL  L +                  +T   T 
Sbjct: 117 LPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTG----------STAGSTG 166
Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
           T      +A+KAA+ S  R+  L+   D  IR+N ++PGP + T  V     + ++ +  
Sbjct: 167 TPAFSVYAASKAALRSFARNWILDL-KDRGIRINTLSPGPTETTGLVELAGKDPVQQQGL 225
Query: 182 -DYMAAY----KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN 221
            + +AA     + G   ++A AAL+LASD   +V G  L VDGG+
Sbjct: 226 LNALAAQVPXGRVGRAEEVAAAALFLASDDSSFVTGAELFVDGGS 270

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 70.5 bits (171), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 100/223 (44%), Gaps = 21/223 (9%)
Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
           VAA+   G  A  ++ +V   ED VR+ E  +  FGKLDI+ + +        +D++P  
Sbjct: 71  VAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEE 130
Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAA 131
           F  V  I++ G F +  EA K+L+                    T    A       S +
Sbjct: 131 FDRVFTINTRGQFFVAREAYKHLE---------IGGRLILMGSITGQAKAVPKHAVYSGS 181
Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT---AGVSKLAP--EEIRSKATDYMAA 186
           K A+++  R +A++   D  I VN +APG IK     A   +  P  E + ++  D  AA
Sbjct: 182 KGAIETFARCMAIDM-ADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAA 240
Query: 187 YKF------GEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 223
            ++      G   DIA    +LAS+ G +V G  + +DGG  +
Sbjct: 241 VQWSPLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGACM 283

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 70.5 bits (171), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 92/222 (41%), Gaps = 13/222 (5%)
Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNFL 61
           R +  L   +    S G        D+  R +   ++ +  NHF GKL+ILVN A     
Sbjct: 40  RNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIY 99
Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTA 121
             A+D +   +  ++ I+    + +   A  +LK                         A
Sbjct: 100 KEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGA--------LA 151
Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT-AGVSKLAPE--EIRS 178
             Y+    A K A+D +TR LA EW  D  IRVNG+ PG I  +   ++   PE  E  +
Sbjct: 152 VPYEAVYGATKGAMDQLTRCLAFEWAKD-NIRVNGVGPGVIATSLVEMTIQDPEQKENLN 210
Query: 179 KATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           K  D  A  + GE  ++A    +L   A  YV G  + VDGG
Sbjct: 211 KLIDRCALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGG 252

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 70.5 bits (171), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 100/223 (44%), Gaps = 21/223 (9%)
Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
           VAA+   G  A  ++ +V   ED VR+ E  +  FGKLDI+ + +        +D++P  
Sbjct: 71  VAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEE 130
Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAA 131
           F  V  I++ G F +  EA K+L+                    T    A       S +
Sbjct: 131 FDRVFTINTRGQFFVAREAYKHLE---------IGGRLILMGSITGQAKAVPKHAVYSGS 181
Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT---AGVSKLAP--EEIRSKATDYMAA 186
           K A+++  R +A++   D  I VN +APG IK     A   +  P  E + ++  D  AA
Sbjct: 182 KGAIETFARCMAIDM-ADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAA 240
Query: 187 YKF------GEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 223
            ++      G   DIA    +LAS+ G +V G  + +DGG  +
Sbjct: 241 VQWSPLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGACM 283

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 70.5 bits (171), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 92/222 (41%), Gaps = 13/222 (5%)
Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNFL 61
           R +  L   +    S G        D+  R +   ++ +  NHF GKL+ILVN A     
Sbjct: 41  RNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIY 100
Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTA 121
             A+D +   +  ++ I+    + +   A  +LK                         A
Sbjct: 101 KEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGA--------LA 152
Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT-AGVSKLAPE--EIRS 178
             Y+    A K A+D +TR LA EW  D  IRVNG+ PG I  +   ++   PE  E  +
Sbjct: 153 VPYEAVYGATKGAMDQLTRCLAFEWAKD-NIRVNGVGPGVIATSLVEMTIQDPEQKENLN 211
Query: 179 KATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           K  D  A  + GE  ++A    +L   A  YV G  + VDGG
Sbjct: 212 KLIDRCALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGG 253

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 14/217 (6%)
Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVN-AAAGNFLVPAED 66
           L   V  L  +G   +G++ DV K++D    V  T   + ++D+L N A   + + P  +
Sbjct: 44  LNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAE 103
Query: 67  LSPNGFRTVIEIDSVGTFIMCHEALK-YLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQ 125
           +S   +  V+ ++    F      +   LK+                  A   YT     
Sbjct: 104 VSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTV---- 159
Query: 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA-TDYM 184
                AK  +  +TRS+A  +G D  IR   + PG +K   G+    P E+  +  T  M
Sbjct: 160 -----AKHGLIGLTRSIAAHYG-DQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLM 213
Query: 185 A-AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           + + +  E  DIA   ++LASD   +VNG+ ++VDGG
Sbjct: 214 SLSSRLAEPEDIANVIVFLASDEASFVNGDAVVVDGG 250

>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 94/198 (47%), Gaps = 22/198 (11%)
Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAA---GNF--LVPAEDLSPNGFRTVIEIDSVG 82
           DV       R     + H G+LD +V+ A     NF    P ED     +  V+ ++  G
Sbjct: 57  DVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKXPLED-----WELVLRVNLTG 111
Query: 83  TFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSL 142
           +F++   A +  ++                  A+  Y     Q + +A+ A V  +TR+L
Sbjct: 112 SFLVAKAASEAXREKNPGSIVLT---------ASRVYLGNLGQANYAASXAGVVGLTRTL 162
Query: 143 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 202
           ALE G  + IRVN +APG I +T   +K+ PE++R KA       + G+  ++A AAL+L
Sbjct: 163 ALELGR-WGIRVNTLAPGFI-ETRXTAKV-PEKVREKAIAATPLGRAGKPLEVAYAALFL 219
Query: 203 ASDAGKYVNGNTLIVDGG 220
            SD   ++ G  L VDGG
Sbjct: 220 LSDESSFITGQVLFVDGG 237

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 21/207 (10%)
Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA-EDLSPNGFRTVIE 77
           G+  + L GD+   +    +V+ T+   G L+ILVN  A  +     E ++         
Sbjct: 96  GVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFR 155
Query: 78  IDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDS 137
           I+    F +   AL +LK+                  + + Y      I  SA K A+ +
Sbjct: 156 INIFSYFHVTKAALSHLKQ----------GDVIINTASIVAYEGNETLIDYSATKGAIVA 205
Query: 138 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA----YKFGEKW 193
            TRSL+        IRVNG+APGPI      + L P     K      +     + G+ +
Sbjct: 206 FTRSLSQSL-VQKGIRVNGVAPGPI-----WTPLIPSSFDEKKVSQFGSNVPXQRPGQPY 259
Query: 194 DIAMAALYLASDAGKYVNGNTLIVDGG 220
           ++A A +YLAS    YV G  + V+GG
Sbjct: 260 ELAPAYVYLASSDSSYVTGQXIHVNGG 286

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 21/207 (10%)
Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA-EDLSPNGFRTVIE 77
           G+  + L GD+   +    +V+ T+   G L+ILVN  A  +     E ++         
Sbjct: 96  GVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFR 155
Query: 78  IDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDS 137
           I+    F +   AL +LK+                  + + Y      I  SA K A+ +
Sbjct: 156 INIFSYFHVTKAALSHLKQ----------GDVIINTASIVAYEGNETLIDYSATKGAIVA 205
Query: 138 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA----YKFGEKW 193
            TRSL+        IRVNG+APGPI      + L P     K      +     + G+ +
Sbjct: 206 FTRSLSQSL-VQKGIRVNGVAPGPI-----WTPLIPSSFDEKKVSQFGSNVPMQRPGQPY 259
Query: 194 DIAMAALYLASDAGKYVNGNTLIVDGG 220
           ++A A +YLAS    YV G  + V+GG
Sbjct: 260 ELAPAYVYLASSDSSYVTGQMIHVNGG 286

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 104/228 (45%), Gaps = 29/228 (12%)
Query: 10  SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA----GNFLVPAE 65
           +AV   + +G  A G+  DV   +DA   VE T   +G++D+LVN A     GN +   E
Sbjct: 63  AAVRVANEIGSKAFGVRVDVSSAKDAESXVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPE 122
Query: 66  DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWY- 124
           +     +  +  ++  G F+     +   ++                   T  YTAT   
Sbjct: 123 ET----WDRIXSVNVKGIFLCSKYVIPVXRRNGGGSIIN-----------TTSYTATSAI 167
Query: 125 --QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-----APEEIR 177
             +    A+K A+ S+TR+ A +   +  IRVN +APG I D+   +K+      P ++R
Sbjct: 168 ADRTAYVASKGAISSLTRAXAXDHAKE-GIRVNAVAPGTI-DSPYFTKIFAEAKDPAKLR 225
Query: 178 SKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSN 225
           S         + G   +IA A L+LASD  ++  G+ L VDGG+ + N
Sbjct: 226 SDFNARAVXDRXGTAEEIAEAXLFLASDRSRFATGSILTVDGGSSIGN 273

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 95/224 (42%), Gaps = 19/224 (8%)
Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--- 57
           + R +    S V  + S G  + G  GDV K+E+   V+   +     +DILVN A    
Sbjct: 74  ISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITR 133
Query: 58  -GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXAT 116
              FL    D   +  RT +             +L Y+ +                  + 
Sbjct: 134 DNLFLRMKNDEWEDVLRTNLN------------SLFYITQPISKRMINNRYGRIINISSI 181
Query: 117 LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI 176
           +  T    Q + S++KA V   T+SLA E  +   I VN IAPG I  ++ ++    E+I
Sbjct: 182 VGLTGNVGQANYSSSKAGVIGFTKSLAKELASR-NITVNAIAPGFI--SSDMTDKISEQI 238
Query: 177 RSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           +      + A + G   ++A  A +L+SD   Y+NG   ++DGG
Sbjct: 239 KKNIISNIPAGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGG 282

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 22/220 (10%)
Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
           V+ + +LG  AI ++ D+R+  + V++ +  + HFG LDI V+ +        +D++   
Sbjct: 60  VSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEE 119
Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAA 131
           F  V  +++ G F +  EA ++L +                      ++   + ++ S +
Sbjct: 120 FDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKD--------FSVPKHSLY-SGS 170
Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAP-GPIKDT----------AGVSKLAPEEIRSKA 180
           K AVDS  R  + + G D  I VN +AP G + D            G S  A E+ +  A
Sbjct: 171 KGAVDSFVRIFSKDCG-DKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTA-EQRQQMA 228
Query: 181 TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                 ++ G   D+A    +L S  G++VNG  L +DGG
Sbjct: 229 AHASPLHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGG 268

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 67.8 bits (164), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 97/206 (47%), Gaps = 16/206 (7%)
Query: 24  GLEGD--VRKREDAVRV---VESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 78
           GLEG   V    DA  V   VEST+  FG L++LVN A       A  +  + +  VI+ 
Sbjct: 76  GLEGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDT 135
Query: 79  DSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSI 138
           +    F +    L+ + K                  + +       Q++ +AAKA V  +
Sbjct: 136 NLKAVFRLSRAVLRPMMKARGGRIVNIT--------SVVGSAGNPGQVNYAAAKAGVAGM 187
Query: 139 TRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 198
           TR+LA E G+   I VN +APG I DT  ++K  P+E ++     +   + G   DIA A
Sbjct: 188 TRALAREIGS-RGITVNCVAPGFI-DTD-MTKGLPQEQQTALKTQIPLGRLGSPEDIAHA 244
Query: 199 ALYLASDAGKYVNGNTLIVDGGNWLS 224
             +LAS    Y+ G TL V+GG ++S
Sbjct: 245 VAFLASPQAGYITGTTLHVNGGMFMS 270

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 67.8 bits (164), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 22/220 (10%)
Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
           V+ + +LG  AI ++ D+R+  + V++ +  + HFG LDI V+ +        +D++   
Sbjct: 60  VSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEE 119
Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAA 131
           F  V  +++ G F +  EA ++L +                      ++   + +  S +
Sbjct: 120 FDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKD--------FSVPKHSL-FSGS 170
Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAP-GPIKDT----------AGVSKLAPEEIRSKA 180
           K AVDS  R  + + G D  I VN +AP G + D            G S  A E+ +  A
Sbjct: 171 KGAVDSFVRIFSKDCG-DKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTA-EQRQQMA 228
Query: 181 TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                 ++ G   D+A    +L S  G++VNG  L +DGG
Sbjct: 229 AHASPLHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGG 268

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 67.8 bits (164), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 19/215 (8%)
Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
           A AA+ +LG   + ++ DV +  D     +  I+ FG+ DILVN A    L+P ++L+  
Sbjct: 45  AEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFE 104
Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQI---- 126
            ++   EI+    F+M    +  +K+                    L  T  W +I    
Sbjct: 105 QWKKTFEINVDSGFLMAKAFVPGMKRNGWGRII------------NLTSTTYWLKIEAYT 152
Query: 127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA 186
           H  + KAA    TR+LA + G D  I VN IAP  ++ TA     A   +     + + A
Sbjct: 153 HYISTKAANIGFTRALASDLGKD-GITVNAIAPSLVR-TATTEASALSAMFDVLPNMLQA 210
Query: 187 Y-KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             +     D+  AA +LASD   ++ G TL VDGG
Sbjct: 211 IPRLQVPLDLTGAAAFLASDDASFITGQTLAVDGG 245

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 100/231 (43%), Gaps = 15/231 (6%)
Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGN 59
           +GR +T +      +   G  AI LE DV         V   +  FG LDI+V NA    
Sbjct: 58  LGRTRTEVEEVADEIVGAGGQAIALEADVSDELQXRNAVRDLVLKFGHLDIVVANAGING 117
Query: 60  FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHY 119
              P +DL P  +   I ++  GTF+  H  + YLK+                   T  +
Sbjct: 118 VWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQ-----RGGGAIVVVSSINGTRTF 172
Query: 120 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK-DTAGVSKLAPEEIRS 178
           T      + +   A V +I + LALE G  + IRVN + PG I+ + +  +KL  EE  +
Sbjct: 173 TTPGATAYTATKAAQV-AIVQQLALELGKHH-IRVNAVCPGAIETNISDNTKLRHEEETA 230
Query: 179 KATDY------MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 223
              ++      +   + G   D+A    +L S+  ++V G+ + +DGG  L
Sbjct: 231 IPVEWPKGQVPITDGQPGRSEDVAELIRFLVSERARHVTGSPVWIDGGQGL 281

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 87/202 (43%), Gaps = 18/202 (8%)
Query: 28  DVRKREDAVRVVESTINHFGKLD-ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 86
           DV         V +T   FG++D    NA       P E  +   F  V+ I+  G F+ 
Sbjct: 72  DVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLG 131
Query: 87  CHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEW 146
             + LK +++                            Q   +AAK  V  +TR+ A+E+
Sbjct: 132 LEKVLKIMREQGSGMVVNTASVGGIRGIGN--------QSGYAAAKHGVVGLTRNSAVEY 183
Query: 147 GTDYAIRVNGIAPG----PIKDTAGVSKLAPEEIRSKATDYMA---AYKFGEKWDIAMAA 199
           G  Y IR+N IAPG    P+ + + + +L PE  R  A +++    + ++GE  +IA   
Sbjct: 184 GR-YGIRINAIAPGAIWTPMVENS-MKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVV 241
Query: 200 LYLASDAGKYVNGNTLIVDGGN 221
            +L SD   YVN   + +DGG 
Sbjct: 242 AFLLSDDASYVNATVVPIDGGQ 263

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 91/213 (42%), Gaps = 19/213 (8%)
Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN----FLVPAEDL 67
           V  +  LG  A     D+   ++   + +  I+  GK+DILVN A G     F +P  D 
Sbjct: 52  VDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMAD- 110
Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIH 127
               FR   E++    F +       ++K                    +   A+     
Sbjct: 111 ----FRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYAS----- 161
Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 187
              +KAA   + R++A + G +  IRVNGIAPG I   A  S + P EI  K   +    
Sbjct: 162 ---SKAAASHLVRNMAFDLG-EKNIRVNGIAPGAILTDALKSVITP-EIEQKMLQHTPIR 216
Query: 188 KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           + G+  DIA AAL+L S A  +V+G  L V GG
Sbjct: 217 RLGQPQDIANAALFLCSPAASWVSGQILTVSGG 249

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score = 63.9 bits (154), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS---PNGFRTVIEIDSVGTF 84
           D+    + VR VE      G++D+LVN AA     P   L+   P  +R V+E++     
Sbjct: 57  DLEDERERVRFVEEAAYALGRVDVLVNNAA--IAAPGSALTVRLPE-WRRVLEVNLTAPM 113
Query: 85  IMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
            +   A + ++K                  +     A       +A+K  + ++TRSLAL
Sbjct: 114 HLSALAAREMRKVGGGAIVNVA--------SVQGLFAEQENAAYNASKGGLVNLTRSLAL 165
Query: 145 EWGTDYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSKATDYMAAYKFGEKWDIAMAAL 200
           +      IRVN +APG I   A +  +A    PE  R    D  A  + G+  ++A A L
Sbjct: 166 DL-APLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVL 224
Query: 201 YLASDAGKYVNGNTLIVDGG 220
           +LAS+   ++ G  L VDGG
Sbjct: 225 FLASEKASFITGAILPVDGG 244

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 99/219 (45%), Gaps = 19/219 (8%)
Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAE 65
            + V  + + G+ +  ++ +V   ++   +++  ++ FG LD+LVN A     N L+   
Sbjct: 49  EAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMR-- 106
Query: 66  DLSPNGFRTVIEIDSVGTFIMCHEAL-KYLKKXXXXXXXXXXXXXXXXXXATLHYTATWY 124
            +    +  VI+ +  G F    +A  + L++                     +Y AT  
Sbjct: 107 -MKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVAT-- 163
Query: 125 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM 184
                  KA V  +T+S A E  +   I VN +APG I   + ++    +E++ +    +
Sbjct: 164 -------KAGVIGLTKSAARELAS-RGITVNAVAPGFI--VSDMTDALSDELKEQMLTQI 213
Query: 185 AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 223
              +FG+  DIA    +LASD  KY+ G T+ V+GG ++
Sbjct: 214 PLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGGMYM 252

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 85/196 (43%), Gaps = 15/196 (7%)
Query: 37  RVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKK 96
            ++ +T+  FGKLDILVN A     +P +  S  G    IE       +     +   KK
Sbjct: 75  EILSTTLGKFGKLDILVNNAGA--AIP-DSQSKTGTAQSIESYDATLNLNLRSVIALTKK 131
Query: 97  XXXXXXXXXXXXXXXXXXAT-LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN 155
                             A+ LH T  +   + S AKAA+D  TR+ A++    + IRVN
Sbjct: 132 AVPHLSSTKGEIVNISSIASGLHATPDFP--YYSIAKAAIDQYTRNTAIDL-IQHGIRVN 188
Query: 156 GIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-------FGEKWDIAMAALYLAS-DAG 207
            I+PG +    G +   PEE   K    MA  K        G+  DIA    +LA     
Sbjct: 189 SISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLADRKTS 248
Query: 208 KYVNGNTLIVDGGNWL 223
            Y+ G+ L+VDGG+ L
Sbjct: 249 SYIIGHQLVVDGGSSL 264

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 87/208 (41%), Gaps = 30/208 (14%)
Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRTVIEIDSVGTF 84
           DV   ED  RVV      FG +D LVN A    G FL   E  S   FR V+EI+  G F
Sbjct: 59  DVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFL---ETESVERFRKVVEINLTGVF 115
Query: 85  IMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
           I     +  +K                     L  T+++      A+K  V  +++  A+
Sbjct: 116 IGMKTVIPAMKDAGGGSIVNISSAAGLMG---LALTSSY-----GASKWGVRGLSKLAAV 167
Query: 145 EWGTDYAIRVNGIAPG----PIKDTAGVSKLAPEEIRSKATDY--MAAYKFGEKWDIAMA 198
           E GTD  IRVN + PG    P+    G        IR    +Y      + GE  +IA A
Sbjct: 168 ELGTDR-IRVNSVHPGMTYTPMTAETG--------IRQGEGNYPNTPMGRVGEPGEIAGA 218
Query: 199 ALYLASDAGKYVNGNTLIVDGGNWLSNP 226
            + L SD   YV G  L VDGG W + P
Sbjct: 219 VVKLLSDTSSYVTGAELAVDGG-WTTGP 245

>pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 90/204 (44%), Gaps = 10/204 (4%)
Query: 17  SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVI 76
           + GI A   +  V   E   ++V+  +  FG++D  +  A         D S   +  V+
Sbjct: 70  TYGIKAKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVV 129
Query: 77  EIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVD 136
           ++D  GTF  C +A+ +  K                  A      T Y +    AKA   
Sbjct: 130 QVDLNGTF-HCAKAVGHHFKERGTGSLVITASMSGHI-ANFPQEQTSYNV----AKAGCI 183
Query: 137 SITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA 196
            + RSLA EW  D+A RVN I+PG I DT G+S   P+E +      +   + G   ++ 
Sbjct: 184 HMARSLANEW-RDFA-RVNSISPGYI-DT-GLSDFVPKETQQLWHSMIPMGRDGLAKELK 239
Query: 197 MAALYLASDAGKYVNGNTLIVDGG 220
            A +Y ASDA  Y  G  L++DGG
Sbjct: 240 GAYVYFASDASTYTTGADLLIDGG 263

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 19/208 (9%)
Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN----FLVPAEDLSPNGFRT 74
           G+ A G+E ++   E   +  E   N    +DILVN A       FL     +S   +  
Sbjct: 56  GVKAHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFL----RMSLLDWEE 111
Query: 75  VIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAA 134
           V++++  GTF++   +L+ + K                  + + +T    Q++ S  KA 
Sbjct: 112 VLKVNLTGTFLVTQNSLRKMIKQRWGRIVNIS--------SVVGFTGNVGQVNYSTTKAG 163
Query: 135 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 194
           +   T+SLA E      + VN +APG I+    ++ +  EEI+ K  + +   +FG   +
Sbjct: 164 LIGFTKSLAKELAPRNVL-VNAVAPGFIETD--MTAVLSEEIKQKYKEQIPLGRFGSPEE 220
Query: 195 IAMAALYLASDAGKYVNGNTLIVDGGNW 222
           +A   L+L S+   Y+ G  + V+GG +
Sbjct: 221 VANVVLFLCSELASYITGEVIHVNGGMF 248

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 7/210 (3%)
Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPN 70
           VAA+   G  A+ + GDV    D      +    FG+LD LV NA   ++    ++ S  
Sbjct: 68  VAAITESGGEAVAIPGDVGNAADIAAXFSAVDRQFGRLDGLVNNAGIVDYPQRVDEXSVE 127
Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSA 130
                + ++  G+ +   EA++   +                  A +  +AT Y +  +A
Sbjct: 128 RIERXLRVNVTGSILCAAEAVRRXSR---LYSGQGGAIVNVSSXAAILGSATQY-VDYAA 183
Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 190
           +KAA+D+ T  LA E   +  IRVN + PG I+     S   P+  R  A   +   + G
Sbjct: 184 SKAAIDTFTIGLAREVAAE-GIRVNAVRPGIIETDLHASGGLPDRAREXAPS-VPXQRAG 241
Query: 191 EKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
              ++A A LYL S +  YV G+ L V GG
Sbjct: 242 XPEEVADAILYLLSPSASYVTGSILNVSGG 271

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/215 (23%), Positives = 94/215 (43%), Gaps = 11/215 (5%)
Query: 6   TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAE 65
           T L +      + GI  +  +GDV+  ED   +V++ ++ FG++DILVN A         
Sbjct: 41  TSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLML 100
Query: 66  DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQ 125
            +S   +  V+  +    ++      K + K                  A         Q
Sbjct: 101 KMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAG--------Q 152
Query: 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA 185
            + +A+KA +   T+S+A E+     I  N +APG IK    ++ + P++++    + + 
Sbjct: 153 ANYAASKAGLIGFTKSIAKEFAAK-GIYCNAVAPGIIK--TDMTDVLPDKVKEMYLNNIP 209
Query: 186 AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             +FG   ++A    +LASD   Y+ G  + +DGG
Sbjct: 210 LKRFGTPEEVANVVGFLASDDSNYITGQVINIDGG 244

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 19/218 (8%)
Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAE 65
            + V  + + G+ +  ++ +V   ++    ++  ++ FG LD+LVN A     N L   +
Sbjct: 43  EAVVEEIKAKGVDSFAIQANVADADEVKAXIKEVVSQFGSLDVLVNNAGITRDNLLXRXK 102
Query: 66  DLSPNGFRTVIEIDSVGTFIMCHEAL-KYLKKXXXXXXXXXXXXXXXXXXATLHYTATWY 124
           +     +  VI+ +  G F    +A  + L++                     +Y AT  
Sbjct: 103 EQE---WDDVIDTNLKGVFNCIQKATPQXLRQRSGAIINLSSVVGAVGNPGQANYVAT-- 157
Query: 125 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM 184
                  KA V  +T+S A E  +   I VN +APG I   +  +    +E++ +    +
Sbjct: 158 -------KAGVIGLTKSAARELAS-RGITVNAVAPGFI--VSDXTDALSDELKEQXLTQI 207
Query: 185 AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW 222
              +FG+  DIA    +LASD  KY+ G T+ V+GG +
Sbjct: 208 PLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGGXY 245

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 18/184 (9%)
Query: 39  VESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXX 98
           V++ +  FG L +LVN A    +   ED +   ++ +++++  G F+     +K +K+  
Sbjct: 72  VDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG 131
Query: 99  XXXXXXXXXXXXXXXXATLH-YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI 157
                              H YTAT         K AV  +T+S ALE G    IRVN I
Sbjct: 132 RGSIINISSIEGLAGTVACHGYTAT---------KFAVRGLTKSTALELGPS-GIRVNSI 181
Query: 158 APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIV 217
            PG +K    ++   PE+I   A    A     E  +++   +YLASD   Y  G   +V
Sbjct: 182 HPGLVKTP--MTDWVPEDIFQTALGRAA-----EPVEVSNLVVYLASDESSYSTGAEFVV 234
Query: 218 DGGN 221
           DGG 
Sbjct: 235 DGGT 238

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 94/220 (42%), Gaps = 10/220 (4%)
Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFL 61
           R++  +  AVA L   G+   G    V K ED  R+V + +   G +DILV NAA   F 
Sbjct: 47  RKQQNVDQAVATLQGEGLSVTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFF 106
Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTA 121
               D++   +   ++I+     +M    +  ++K                  A    + 
Sbjct: 107 GSIMDVTEEVWDKTLDINVKAPALMTKAVVPEMEK------RGGGSVVIVSSIAAFSPSP 160
Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
            +   +VS  K A+  +T++LA+E      IRVN +APG IK +        +E      
Sbjct: 161 GFSPYNVS--KTALLGLTKTLAIELA-PRNIRVNCLAPGLIKTSFSRMLWMDKEKEESMK 217
Query: 182 DYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN 221
           + +   + GE  D A    +L S+   Y+ G T++V GG 
Sbjct: 218 ETLRIRRLGEPEDCAGIVSFLCSEDASYITGETVVVGGGT 257

>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274

Iteration: 1
 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 48/232 (20%), Positives = 93/232 (40%), Gaps = 25/232 (10%)
Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
           G         VA L  LG   + ++ D+ K  + V + +  ++HFG LD +++ +     
Sbjct: 53  GSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVW 112
Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTA 121
               +++   F  V  +++ G F +  + LK+ ++                  +++    
Sbjct: 113 CDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR-----------GGRIILTSSIAAVM 161
Query: 122 TWYQIHV--SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT-----------AGV 168
           T    H   + +KAAV+   R+ A++ G    + VN IAPG +K              G 
Sbjct: 162 TGIPNHALYAGSKAAVEGFCRAFAVDCGAK-GVTVNCIAPGGVKTDMFDENSWHYAPGGY 220
Query: 169 SKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             +  E+I     +     + G   DI  A   L  +  +++NG  + + GG
Sbjct: 221 KGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGG 272

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 24/207 (11%)
Query: 33  EDAVR-VVESTINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           E +VR +++ TI+ FG+LDI+ N AA     + LV    ++ + +     +++ GT +MC
Sbjct: 69  EVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLV--TQMTVDVWDDTFTVNARGTMLMC 126
Query: 88  HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYT---ATWYQIHVSAAKAAVDSITRSLAL 144
             A+  L                    AT H     +T Y    +  KAA++++TR +A 
Sbjct: 127 KYAIPRL-------ISAGGGAIVNISSATAHAAYDMSTAY----ACTKAAIETLTRYVAT 175
Query: 145 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 204
           ++G  + +R N IAPG ++ T  +    P+ I      +  A + GE  +IA    +LAS
Sbjct: 176 QYGR-HGVRCNAIAPGLVR-TPRLEVGLPQPIVDIFATHHLAGRIGEPHEIAELVCFLAS 233
Query: 205 DAGKYVNGNTLIVDGGNWLSNPRDLPK 231
           D   ++ G  +  D G  L++   LP+
Sbjct: 234 DRAAFITGQVIAADSG-LLAHLPGLPQ 259

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 81/190 (42%), Gaps = 9/190 (4%)
Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           DV   E    ++  T+   G+LD+LVN A      P  D++   +  V+ +         
Sbjct: 81  DVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRAT 140
Query: 88  HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 147
             AL+Y +                   + L + A   Q H +AAKA V ++TR  A+E  
Sbjct: 141 RAALRYFRG-------VDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIE-A 192
Query: 148 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 207
            ++ +R+N ++P  I     + K +  E+  +     A  +  E W++A    +LASD  
Sbjct: 193 VEFGVRINAVSP-SIARHKFLEKTSSSELLDRLASDEAFGRAAEPWEVAATIAFLASDYS 251
Query: 208 KYVNGNTLIV 217
            Y+ G  + V
Sbjct: 252 SYMTGEVVSV 261

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 83/207 (40%), Gaps = 18/207 (8%)
Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRTV 75
           G  AI +  DV   E A  + + T+  FG +D LVN AA   G  L     + P  ++  
Sbjct: 57  GGTAISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKF 116
Query: 76  IEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATW-YQIHVSAAKAA 134
           + ++  G         K + K                       TA W Y  +   AK  
Sbjct: 117 MSVNLDGALWCTRAVYKKMTKRGGGAIVNQSS------------TAAWLYSNYYGLAKVG 164
Query: 135 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 194
           ++ +T+ L+ E G    IR+N IAPGPI DT       P+E+       +   + G   D
Sbjct: 165 INGLTQQLSRELG-GRNIRINAIAPGPI-DTEANRTTTPKEMVDDIVKGLPLSRMGTPDD 222
Query: 195 IAMAALYLASDAGKYVNGNTLIVDGGN 221
           +    L+L SD   ++ G    VDGG 
Sbjct: 223 LVGMCLFLLSDEASWITGQIFNVDGGQ 249

>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 79/184 (42%), Gaps = 18/184 (9%)
Query: 39  VESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXX 98
           V++ +  FG L +LVN A    +   ED +   ++ +++++  G F+     +K  K+  
Sbjct: 72  VDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPXKEAG 131
Query: 99  XXXXXXXXXXXXXXXXATLH-YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI 157
                              H YTAT         K AV  +T+S ALE G    IRVN I
Sbjct: 132 RGSIINISSIEGLAGTVACHGYTAT---------KFAVRGLTKSTALELGPS-GIRVNSI 181
Query: 158 APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIV 217
            PG +K     +   PE+I   A    A     E  +++   +YLASD   Y  G   +V
Sbjct: 182 HPGLVKTPX--TDWVPEDIFQTALGRAA-----EPVEVSNLVVYLASDESSYSTGAEFVV 234
Query: 218 DGGN 221
           DGG 
Sbjct: 235 DGGT 238

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 95/224 (42%), Gaps = 15/224 (6%)
Query: 4   RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG-KLDILVNAAAGNFLV 62
           R T+L  +V  L   G  A G+  DV   E A+    S ++  G  +DIL+N A   +  
Sbjct: 42  RATLLAESVDTLTRKGYDAHGVAFDVTD-ELAIEAAFSKLDAEGIHVDILINNAGIQYRK 100
Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL--KKXXXXXXXXXXXXXXXXXXATLHYT 120
           P  +L    ++ VI+ +    F++   A K +  +                       YT
Sbjct: 101 PMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYT 160
Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
           A         AK  +  +T S+A EW   + I+ N I PG I      + +  ++  S  
Sbjct: 161 A---------AKGGIKMLTCSMAAEWA-QFNIQTNAIGPGYILTDMNTALIEDKQFDSWV 210
Query: 181 TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 224
                + ++G   ++   A++L+S A  Y+NG  + VDGG WL+
Sbjct: 211 KSSTPSQRWGRPEELIGTAIFLSSKASDYINGQIIYVDGG-WLA 253

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 85/197 (43%), Gaps = 18/197 (9%)
Query: 27  GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV-PAEDLSPNGFRTVIEIDSVGTF- 84
           GD+ K E A R+V   I  FG++D LVN A G FL  P  + +   +   + ++  G F 
Sbjct: 75  GDISKPETADRIVREGIERFGRIDSLVNNA-GVFLAKPFVEXTQEDYDHNLGVNVAGFFH 133
Query: 85  IMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
           I    A + LK+                        A       S  K  ++++TRSLA 
Sbjct: 134 ITQRAAAEXLKQGSGHIVSITTSLVDQPXVGXPSALA-------SLTKGGLNAVTRSLAX 186
Query: 145 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 204
           E+ +   +RVN ++PG IK     +   P E  S         + GE  D+  A LYL  
Sbjct: 187 EF-SRSGVRVNAVSPGVIK-----TPXHPAETHSTLAGLHPVGRXGEIRDVVDAVLYL-- 238
Query: 205 DAGKYVNGNTLIVDGGN 221
           +   ++ G  L VDGG 
Sbjct: 239 EHAGFITGEILHVDGGQ 255

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 28/187 (14%)
Query: 48  KLDILVNAAAGNFLVPAEDLSPNGFRTVIEID---------SVGTFIMCHEALKYLKKXX 98
           ++D+LVN A      PAE++S   +R V+ ++         S GT ++ H + + +    
Sbjct: 106 RVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVT--- 162
Query: 99  XXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA 158
                           + L +         +A+K AV  +TR+LA EW     + VN +A
Sbjct: 163 --------------IASMLSFQGGRNVAAYAASKHAVVGLTRALASEW-AGRGVGVNALA 207
Query: 159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVD 218
           PG +      +  A +E  ++ T  + A ++    D+   A++LASDA  YV+G  L VD
Sbjct: 208 PGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASDAASYVHGQVLAVD 267
Query: 219 GGNWLSN 225
           GG WL++
Sbjct: 268 GG-WLAS 273

>pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus Length = 265

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/208 (21%), Positives = 83/208 (39%), Gaps = 7/208 (3%)
Query: 18  LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIE 77
            G+     + DV   +   + ++      G +  L+  A  + + PA +L+   F  V +
Sbjct: 62  FGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYD 121
Query: 78  IDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDS 137
           ++  G F  C    K   +                         +  Q+  +++KAA  +
Sbjct: 122 VNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSN 181
Query: 138 ITRSLALEWGTDYAIRVNGIAPGPIK--DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 195
           + + LA EW +   IRVN ++PG +    TA + K    +IR      +   +F +  ++
Sbjct: 182 LVKGLAAEWASA-GIRVNALSPGYVNTDQTAHMDK----KIRDHQASNIPLNRFAQPEEM 236
Query: 196 AMAALYLASDAGKYVNGNTLIVDGGNWL 223
              A+ L SD   Y+ G    +DGG  +
Sbjct: 237 TGQAILLLSDHATYMTGGEYFIDGGQLI 264

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 14/208 (6%)
Query: 16  HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--GNFLVPAEDLSP-NGF 72
           H+     + +  DV    D    + +T+  FG +D+LVN A   GN        +P   F
Sbjct: 48  HAYADKVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQF 107
Query: 73  RTVIEIDSVGTFIMCHEALKY-LKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAA 131
             V+ ++  G F+ C   L + L +                      YT +         
Sbjct: 108 DKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTS--------- 158
Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 191
           K AV  +T+S+A+++     IR N + PG I+      +L   E+R +    +   + G 
Sbjct: 159 KGAVLQLTKSVAVDYAGS-GIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGT 217
Query: 192 KWDIAMAALYLASDAGKYVNGNTLIVDG 219
              +A A ++LA +   YVNG  L++DG
Sbjct: 218 AAQVADAVMFLAGEDATYVNGAALVMDG 245

>pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6 Length = 246

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDY 183
           S  KAAV  +T+S+A ++     IR N + PG + DT  + +       PEE R+     
Sbjct: 148 STTKAAVIGLTKSVAADF-IQQGIRCNCVCPGTV-DTPSLQERIQARGNPEEARNDFLKR 205
Query: 184 MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
               +F    +IAM  +YLASD   YV GN +I+DGG
Sbjct: 206 QKTGRFATAEEIAMLCVYLASDESAYVTGNPVIIDGG 242

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 85/205 (41%), Gaps = 23/205 (11%)
Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRTVIEIDSVGTF 84
           DV   ED  RVV      FG +D LVN A    G FL   E  S   FR V+EI+  G F
Sbjct: 59  DVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFL---ETESVERFRKVVEINLTGVF 115
Query: 85  IMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
           I     +  +K                     L  T+++      A+K  V  +++  A+
Sbjct: 116 IGMKTVIPAMKDAGGGSIVNISSAAGLMG---LALTSSY-----GASKWGVRGLSKLAAV 167
Query: 145 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY--MAAYKFG-EKWDIAMAALY 201
           E GTD  IRVN + PG           A   IR    +Y      + G E  +IA A + 
Sbjct: 168 ELGTDR-IRVNSVHPGMTY----TPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVK 222
Query: 202 LASDAGKYVNGNTLIVDGGNWLSNP 226
           L SD   YV G  L VDGG W + P
Sbjct: 223 LLSDTSSYVTGAELAVDGG-WTTGP 246

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 90/206 (43%), Gaps = 18/206 (8%)
Query: 19  GIPAIGLEG-DVRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRT 74
           G P + + G ++ + E A  +V       G LD LVN A       LV  +D     +  
Sbjct: 50  GSPLVAVLGANLLEAEAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKD---EDWEA 106
Query: 75  VIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAA 134
           V+E +    F    EA+K + K                  + +       Q +  A+KA 
Sbjct: 107 VLEANLSAVFRTTREAVKLMMKARFGRIVNIT--------SVVGILGNPGQANYVASKAG 158
Query: 135 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 194
           +   TR++A E+     I VN +APG I+    +++  P+E++      + A +FG   +
Sbjct: 159 LIGFTRAVAKEY-AQRGITVNAVAPGFIETE--MTERLPQEVKEAYLKQIPAGRFGRPEE 215
Query: 195 IAMAALYLASDAGKYVNGNTLIVDGG 220
           +A A  +L S+   Y+ G TL VDGG
Sbjct: 216 VAEAVAFLVSEKAGYITGQTLCVDGG 241

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 18/211 (8%)
Query: 18  LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVI 76
           +G  A+ +  D+ K  D    VE+ ++ FGK+DILV NA  G+    AE + P  F  ++
Sbjct: 53  IGDAALAVAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIV 112
Query: 77  EIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVD 136
            ++  G ++M  + + + K+                          WY    +A K  V 
Sbjct: 113 GVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWY----NATKGWVV 168
Query: 137 SITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-------PEEIRSKATDYMAAYKF 189
           S+T++LA+E      IRV  + P      AG + L         EEIR K  D +   + 
Sbjct: 169 SVTKALAIEL-APAKIRVVALNP-----VAGETPLLTTFMGEDSEEIRKKFRDSIPMGRL 222
Query: 190 GEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            +  D+A AA +L S     + G  L VDGG
Sbjct: 223 LKPDDLAEAAAFLCSPQASMITGVALDVDGG 253

>pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 281

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 15/234 (6%)
Query: 1   MGRRKTVLRSAVAALHSLGI--PAIGLE-GDVRKREDAVRVVESTINHFGKLDILVNAAA 57
           +GR    L  AV  L +LG    AI  E  D+   ++  R V++     G+L  +V+ A 
Sbjct: 41  VGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAG 100
Query: 58  GNFLV-PAEDLSPNGFRTVIEIDSVGT-FIMCHEALKYLKKXXXXXXXXXXXXXXXXXXA 115
           G+  + P   +    +R  ++++  GT +++ H A + ++                    
Sbjct: 101 GSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASN---- 156
Query: 116 TLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE 175
               T  W+  +    K+AVD + +  A E G  + +RVN I PG I+     +     E
Sbjct: 157 ----THRWFGAY-GVTKSAVDHLMQLAADELGASW-VRVNSIRPGLIRTDLVAAITESAE 210
Query: 176 IRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDL 229
           + S         + GE  D+A  A++L SDA  +V G  + VDGG  L    D 
Sbjct: 211 LSSDYAMCTPLPRQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLRRGPDF 264

>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 130 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKF 189
           A+K AV  +TR+LA EW     +RVN +APG +     +      E+     D     + 
Sbjct: 161 ASKGAVHQLTRALAAEW-AGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRC 219
Query: 190 GEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           GE  +IA AAL+LAS A  YV G  L VDGG
Sbjct: 220 GEPSEIAAAALFLASPAASYVTGAILAVDGG 250

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 93/213 (43%), Gaps = 17/213 (7%)
Query: 15  LHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNG 71
           L + G+   GL  DV   E     +E    H G+  I+VN A     N LV  +D   + 
Sbjct: 71  LKANGVEGAGLVLDVSSDESVAATLEHIQQHLGQPLIVVNNAGITRDNLLVRMKD---DE 127
Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAA 131
           +  V+  +    + +    L+ + K                  A         Q + +AA
Sbjct: 128 WFDVVNTNLNSLYRLSKAVLRGMTKARWGRIINIGSVVGAMGNAG--------QTNYAAA 179
Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 191
           KA ++  TR+LA E G+  AI VN +APG I DT    +L PE  R      +   + G+
Sbjct: 180 KAGLEGFTRALAREVGS-RAITVNAVAPGFI-DTDMTREL-PEAQREALLGQIPLGRLGQ 236
Query: 192 KWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 224
             +IA    +LASD   YV G T+ V+GG ++S
Sbjct: 237 AEEIAKVVGFLASDGAAYVTGATVPVNGGMYMS 269

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 93/221 (42%), Gaps = 20/221 (9%)
Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS 68
           ++ VA L + G     +E DV KR      ++  I+  G  D+L   A  + + PA D++
Sbjct: 50  QAVVAGLENGGFA---VEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDIT 106
Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHV 128
              +    ++++ G F+    A ++                     A L         H 
Sbjct: 107 DEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLA-------HY 159
Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT---------AGVSKLAPEEIRSK 179
           SA+K AV   T++LA E      IRVN + PG +K           A +  + PE +R++
Sbjct: 160 SASKFAVFGWTQALAREMAPKN-IRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAE 218
Query: 180 ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                   +  E  D+A   ++LASDA +++ G  + V GG
Sbjct: 219 YVSLTPLGRIEEPEDVADVVVFLASDAARFMTGQGINVTGG 259

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 15/213 (7%)
Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS 68
           ++ V+ +   G  A+ +  D R  E   + +  T+   G LDILVN+A      P E+ +
Sbjct: 70  QAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETT 129
Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHV 128
              F  V  ++    F+    A ++L                    + L     W  I +
Sbjct: 130 VADFDEVXAVNFRAPFVAIRSASRHLGD----------GGRIITIGSNLAELVPWPGISL 179
Query: 129 -SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 187
            SA+KAA+  +T+ LA + G    I VN + PG        +     E +    + +A  
Sbjct: 180 YSASKAALAGLTKGLARDLGP-RGITVNIVHPGSTDTDXNPADGDHAEAQR---ERIATG 235
Query: 188 KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            +GE  DIA    +LA   GK+V G +L +DGG
Sbjct: 236 SYGEPQDIAGLVAWLAGPQGKFVTGASLTIDGG 268

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 57.4 bits (137), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 75/173 (43%), Gaps = 11/173 (6%)
Query: 49  LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXX 108
           +DILVN A   F  P  +L    ++ VI+ +    F++  EA K +              
Sbjct: 104 VDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSL 163
Query: 109 XXXXXXATLH-YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG 167
                 AT+  YT          AK  +  +TR++A EW   Y I+ N I PG +     
Sbjct: 164 TSELARATVAPYTV---------AKGGIKMLTRAMAAEW-AQYGIQANAIGPGYMLTDMN 213
Query: 168 VSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            + +   E  +       A ++G+  ++   A++L++ A  YVNG  + VDGG
Sbjct: 214 QALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLSASASDYVNGQIIYVDGG 266

>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239

Iteration: 1
 Score = 57.4 bits (137), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS 68
           R+   A  SLG  A+ L  D+ K +D   +V+  +   G L +LV+AAA N   PA +LS
Sbjct: 34  RNPEEAAQSLG--AVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELS 90
Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHV 128
              +R V+ +     F++   A  ++ +                    +   A       
Sbjct: 91  YEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPA------Y 144
Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK 188
           + AK A+  +TR+LA EW     IRVN + PG ++    +      E+    T  +   +
Sbjct: 145 TTAKTALLGLTRALAKEW-ARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGR 203
Query: 189 FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           +    +IA  A  L  D  +Y+ G  + VDGG
Sbjct: 204 WARPEEIARVAAVLCGDEAEYLTGQAVAVDGG 235

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 94/221 (42%), Gaps = 12/221 (5%)
Query: 4   RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP 63
           +K  L +A   +  LG+  + ++ +V +      + +     FG+LD+ VN AA   L P
Sbjct: 39  KKAALETA-EEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRP 97
Query: 64  AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATW 123
             +L    +   + I++        EA K ++K                   ++ Y   +
Sbjct: 98  VMELEETHWDWTMNINAKALLFCAQEAAKLMEK------NGGGHIVSISSLGSIRYLENY 151
Query: 124 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKATD 182
             + VS  KAA++++TR LA+E      I VN ++ G I DT  +      E++   A  
Sbjct: 152 TTVGVS--KAALEALTRYLAVELSPKQII-VNAVSGGAI-DTDALKHFPNREDLLEDARQ 207
Query: 183 YMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 223
              A +  E  D+     +L S     + G T+IVDGG  L
Sbjct: 208 NTPAGRMVEIKDMVDTVEFLVSSKADMIRGQTIIVDGGRSL 248

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 97/232 (41%), Gaps = 26/232 (11%)
Query: 4   RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN---- 59
           R+ +L+S V+      + A     DV   +   +++ ST+  FGK+D+LVN A       
Sbjct: 47  RQIILKSGVSEKQVNSVVA-----DVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDA 101
Query: 60  FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHY 119
           F     D   + +   ++++      M  +   +L                        Y
Sbjct: 102 FGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLY 161
Query: 120 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 179
            A         AKAA+D  TRS A++    + IRVN ++PG ++     +   P++   K
Sbjct: 162 YAI--------AKAALDQYTRSTAIDLA-KFGIRVNSVSPGMVETGFTNAMGMPDQASQK 212
Query: 180 ATDYMAAYK-------FGEKWDIAMAALYLAS-DAGKYVNGNTLIVDGGNWL 223
             ++MA++K        G+   IA   L+LA  +   Y+ G +++ DGG  L
Sbjct: 213 FYNFMASHKECIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL 264

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 91/231 (39%), Gaps = 17/231 (7%)
Query: 2   GRRKTVLRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
           GR    + + VA L  LG    IG++ DV  R     +    +  FG +D+ V A AG F
Sbjct: 41  GRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGIDV-VCANAGVF 99
Query: 61  L-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHY 119
              P   ++P     +  ++  GTF      L  L                    +++  
Sbjct: 100 PDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDAL---------IASGSGRVVLTSSITG 150
Query: 120 TATWYQ--IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR 177
             T Y    H  A KAA     R+ A+E    + I VN I PG I  T G+ +   E I 
Sbjct: 151 PITGYPGWSHYGATKAAQLGFMRTAAIEL-APHKITVNAIMPGNIM-TEGLLENGEEYIA 208
Query: 178 SKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRD 228
           S A   + A   G   DI   A +LA+    Y+ G  + VDGG  L    D
Sbjct: 209 SMARS-IPAGALGTPEDIGHLAAFLATKEAGYITGQAIAVDGGQVLPESLD 258

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 87/209 (41%), Gaps = 11/209 (5%)
Query: 15  LHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRT 74
           L   G  A  ++ D     D +  +++ +   G L  LVN A       A  +    F  
Sbjct: 74  LEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHH 133
Query: 75  VIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAA 134
           VI+ +    FI C EALK + K                  + +       Q + SA+K  
Sbjct: 134 VIDNNLTSAFIGCREALKVMSKSRFGSVVNVA--------SIIGERGNMGQTNYSASKGG 185
Query: 135 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 194
           + ++++S A E G    IR N + PG I+     +    +E+++     +   + G   +
Sbjct: 186 MIAMSKSFAYE-GALRNIRFNSVTPGFIETDMNAN--LKDELKADYVKNIPLNRLGSAKE 242
Query: 195 IAMAALYLASDAGKYVNGNTLIVDGGNWL 223
           +A A  +L SD   Y+ G TL V+GG ++
Sbjct: 243 VAEAVAFLLSDHSSYITGETLKVNGGLYM 271

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 84/202 (41%), Gaps = 16/202 (7%)
Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           D R  +   +VV+  +   G+LDI+V  A        +D++P  FR V++I+  GT+   
Sbjct: 81  DTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTV 140
Query: 88  HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 147
                 + +                           + IH +A+K AV  + R+ A E G
Sbjct: 141 MAGAPRIIEGGRGGSIILISSAAGMKMQP-------FMIHYTASKHAVTGLARAFAAELG 193
Query: 148 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY---KFGEKW-----DIAMAA 199
             ++IRVN + PGP+    G   +     ++  T+   ++    F   W     DIA   
Sbjct: 194 K-HSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPDWVAEPEDIADTV 252
Query: 200 LYLASDAGKYVNGNTLIVDGGN 221
            +LASD  + V    + VD G+
Sbjct: 253 CWLASDESRKVTAAQIPVDQGS 274

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/97 (43%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT-DYMAAY 187
           +AAK  V  +T+ LA EW     I VN IAPG I +T     L  +  R+KA  + + A 
Sbjct: 153 TAAKHGVAGLTKLLANEWAAK-GINVNAIAPGYI-ETNNTEALRADAARNKAILERIPAG 210
Query: 188 KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 224
           ++G   DIA AA++L+S A  YV+G  L VDGG WL+
Sbjct: 211 RWGHSEDIAGAAVFLSSAAADYVHGAILNVDGG-WLA 246

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 89/228 (39%), Gaps = 21/228 (9%)
Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
           L +A A    +G  A  +  DV  +    R V   ++ +G +DILVN AA   L P  ++
Sbjct: 39  LEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEI 98
Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLH--YTATWYQ 125
           +   +  +  I+  GT  M     + +                      L   Y AT   
Sbjct: 99  TRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCAT--- 155
Query: 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT---------AGVSKLAPEEI 176
                 KAAV S+T+S  L     + I VN IAPG +            A    L   E 
Sbjct: 156 ------KAAVISLTQSAGLNL-IRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEK 208
Query: 177 RSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 224
           + +    +   + G   D+   A++LA+    Y+   T  VDGGNW+S
Sbjct: 209 KRQVGAAVPFGRMGRAEDLTGMAIFLATPEADYIVAQTYNVDGGNWMS 256

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 92/210 (43%), Gaps = 20/210 (9%)
Query: 15  LHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG--- 71
           + + G  A+  + DV       R+  +    FG +D+LVN A    + P   ++  G   
Sbjct: 72  IEAAGGKALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAG---IXPLTTIAETGDAV 128
Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAA 131
           F  VI ++  GTF    EA + L+                     LH +   Y I+ +AA
Sbjct: 129 FDRVIAVNLKGTFNTLREAAQRLR------VGGRIINXSTSQVGLLHPS---YGIY-AAA 178
Query: 132 KAAVDSITRSLALEW-GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 190
           KA V++ T  L+ E  G D  I VN +APGP   T    +   +E+R +        + G
Sbjct: 179 KAGVEAXTHVLSKELRGRD--ITVNAVAPGPTA-TDLFLEGKSDEVRDRFAKLAPLERLG 235
Query: 191 EKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
              DIA A  +LA   G +VNG  L  +GG
Sbjct: 236 TPQDIAGAVAFLAGPDGAWVNGQVLRANGG 265

>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 84/212 (39%), Gaps = 12/212 (5%)
Query: 13  AALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA-EDLSPNG 71
           A +   G  A+ L GD+     A  +V       G LDIL   A     +P  +DL+   
Sbjct: 93  ALIEECGRKAVLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQ 152
Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAA 131
           F+    ++    F +  EA+  L K                      Y  + + +  +A 
Sbjct: 153 FQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQA----------YQPSPHLLDYAAT 202
Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 191
           KAA+ + +R LA +   +  IRVN +APGPI     +S    ++   +        + G+
Sbjct: 203 KAAILNYSRGLAKQV-AEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQ 261
Query: 192 KWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 223
             ++A   +YLAS    YV      V GG  L
Sbjct: 262 PAELAPVYVYLASQESSYVTAEVHGVCGGEHL 293

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 17/209 (8%)
Query: 18  LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRT 74
           LG    G+  +V   E    V+++  + FG +DILVN AA    N L+  ++     +  
Sbjct: 56  LGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAAITRDNLLMRMKEEE---WSD 112
Query: 75  VIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAA 134
           ++E +    F +    L+ + K                  + +       Q + +AAKA 
Sbjct: 113 IMETNLTSIFRLSKAVLRGMMK--------KRQGRIINVGSVVGTMGNAGQANYAAAKAG 164
Query: 135 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 194
           V   T+S+A E  +   + VN +APG I+    ++K   +E R+     + A + G+  +
Sbjct: 165 VIGFTKSMAREVAS-RGVTVNTVAPGFIETD--MTKALNDEQRTATLAQVPAGRLGDPRE 221
Query: 195 IAMAALYLASDAGKYVNGNTLIVDGGNWL 223
           IA A  +LAS    Y+ G TL V+GG ++
Sbjct: 222 IASAVAFLASPEAAYITGETLHVNGGMYM 250

>pdb|2PTG|A Chain A, Crystal Structure Of Eimeria Tenella Enoyl Reductase Length = 319

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 41/103 (39%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Query: 124 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA--GVSKLAPEEIRSKAT 181
           Y   +S+AKAA++S  R+LA E G   A+RVN I+ GP+K  A   + K   +     A 
Sbjct: 202 YGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAI 261
Query: 182 DYMAA----YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           DY  A     K  E  D+  AAL+L S   + V G TL VD G
Sbjct: 262 DYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNG 304

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 18  LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRT 74
           LG    G+  +V   E    V+++  + FG +DILVN A     N L+  ++     +  
Sbjct: 56  LGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEE---WSD 112
Query: 75  VIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAA 134
           ++E +    F +    L+ + K                  + +       Q + +AAKA 
Sbjct: 113 IMETNLTSIFRLSKAVLRGMMK--------KRQGRIINVGSVVGTMGNAGQANYAAAKAG 164
Query: 135 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 194
           V   T+S+A E  +   + VN +APG I+    ++K   +E R+     + A + G+  +
Sbjct: 165 VIGFTKSMAREVAS-RGVTVNTVAPGAIETD--MTKALNDEQRTATLAQVPAGRLGDPRE 221
Query: 195 IAMAALYLASDAGKYVNGNTLIVDGGNWL 223
           IA A  +LAS    Y+ G TL V+GG ++
Sbjct: 222 IASAVAFLASPEAAYITGETLHVNGGMYM 250

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK 188
           SA+K A+  +TRSLA E+  +  IRVN IAPG I    G    A  E   +        +
Sbjct: 148 SASKGAIVQLTRSLACEYAAER-IRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLAR 206
Query: 189 FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           +GE  ++A AA +L      +V G  L VDGG
Sbjct: 207 WGEAPEVASAAAFLCGPGASFVTGAVLAVDGG 238

>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 87/212 (41%), Gaps = 22/212 (10%)
Query: 26  EGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 84
           E DVR  +     V+S +   G+LDI+V NA  GN     +  S   +  +I+I+  G +
Sbjct: 82  EVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVW 141
Query: 85  IMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
                  K +K                   +     A  +  H  AAK  V  + R+  +
Sbjct: 142 -------KTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGV 194
Query: 145 EWGTDYAIRVNGIAPG----PIKDTAGVSKLAPEEIRSKATDYMAAY---------KFGE 191
           E G  + IRVN + P     P+    G  K+   ++ +   D MA            + E
Sbjct: 195 ELG-QHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTLPIPWVE 253
Query: 192 KWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 223
             DI+ A L+ ASD  +Y+ G TL +D G+ L
Sbjct: 254 PIDISNAVLFFASDEARYITGVTLPIDAGSCL 285

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 87/219 (39%), Gaps = 11/219 (5%)
Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG-KLDILVNAAAGNFL 61
           R +  L   ++     G    G   D   R +  +++++  + FG KLDIL+N       
Sbjct: 46  RNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRS 105
Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTA 121
            P  D +   F   I  +    + +   A   LK                        +A
Sbjct: 106 KPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVV-------SA 158
Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
           +   I+ SA K A++ + R+LA EW +D  IR N +AP  I  T     +  +E +    
Sbjct: 159 SVGSIY-SATKGALNQLARNLACEWASD-GIRANAVAPAVIA-TPLAEAVYDDEFKKVVI 215
Query: 182 DYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                 +FGE  +++    +L   A  Y+ G T+ VDGG
Sbjct: 216 SRKPLGRFGEPEEVSSLVAFLCMPAASYITGQTICVDGG 254

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 18  LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRT 74
           LG    G+  +V   E    V+++  + FG +DILVN A     N L+  ++     +  
Sbjct: 56  LGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEE---WSD 112
Query: 75  VIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAA 134
           ++E +    F +    L+ + K                  + +       Q + +AAKA 
Sbjct: 113 IMETNLTSIFRLSKAVLRGMMKKRQGRIINVG--------SVVGTMGNAGQANFAAAKAG 164
Query: 135 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 194
           V   T+S+A E  +   + VN +APG I+    ++K   +E R+     + A + G+  +
Sbjct: 165 VIGFTKSMAREVAS-RGVTVNTVAPGFIETD--MTKALNDEQRTATLAQVPAGRLGDPRE 221
Query: 195 IAMAALYLASDAGKYVNGNTLIVDGGNWL 223
           IA A  +LAS    Y+ G TL V+GG ++
Sbjct: 222 IASAVAFLASPEAAYITGETLHVNGGMYM 250

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 92/222 (41%), Gaps = 21/222 (9%)
Query: 14  ALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFR 73
           A   +G  A  ++ DV +++     + +T+ H G LDILVN AA   L P  +++   + 
Sbjct: 48  AAAEIGPAAYAVQXDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYE 107
Query: 74  TVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLH--YTATWYQIHVSAA 131
            +  I+  GT      A +                        L   Y AT         
Sbjct: 108 KLFAINVAGTLFTLQAAARQXIAQGRGGKIINXASQAGRRGEALVAIYCAT--------- 158
Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA--GVSKL-APEEIRSKAT------D 182
           KAAV S+T+S  L+    + I VN IAPG +      GV  L A  E R +        +
Sbjct: 159 KAAVISLTQSAGLDL-IKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGE 217
Query: 183 YMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 224
            +   + G   D+   A++LAS    Y+   T  VDGGNW S
Sbjct: 218 AVPFGRXGTAEDLTGXAIFLASAESDYIVSQTYNVDGGNWXS 259

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 15/194 (7%)
Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           DV +  +   +  + I  +G+LD+LVN A          +  + +++V++++  G F+  
Sbjct: 86  DVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCS 145
Query: 88  HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 147
             A K + K                  + +       Q + SAAKA V  +T+++A E  
Sbjct: 146 RAAAKIMLK--------QRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELA 197
Query: 148 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD-A 206
           +   I VN +APG I  T   S+LA E    K  + +   ++GE  ++A    +LA+D A
Sbjct: 198 S-RGITVNAVAPGFIA-TDMTSELAAE----KLLEVIPLGRYGEAAEVAGVVRFLAADPA 251
Query: 207 GKYVNGNTLIVDGG 220
             Y+ G  + +DGG
Sbjct: 252 AAYITGQVINIDGG 265

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 7/210 (3%)
Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPN 70
           V  +   G  A+ ++ DV K  + +   E+     G+L  LV NA   +     + ++  
Sbjct: 67  VRQIREAGGQALAVQADVAKEREVLAXFETVDAQLGRLSALVNNAGVVDQTTRVDGITLE 126
Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSA 130
             +   EI+  G+F+   EA+K  +                   A L     +  +  +A
Sbjct: 127 RLQRXFEINVFGSFLCAREAVK--RXSTRYGGSGGSIVNVSSAAARLGSPGQY--VDYAA 182
Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 190
           AK A+D+ T  LA E  T+  IRVN + PG I+     S   P   R  A   +   + G
Sbjct: 183 AKGAIDTFTLGLAKEVATE-GIRVNAVRPGIIETDIHASGGLPNRARDVAPQ-VPXQRAG 240
Query: 191 EKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
              ++A A ++L  D   Y  G  L V GG
Sbjct: 241 TAREVAEAIVWLLGDQASYTTGALLDVTGG 270

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 11/175 (6%)
Query: 47  GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXX 106
           G +DILVN A+    V  +D+  + +R +I+++  GTFI+       ++           
Sbjct: 79  GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMR-------AAGK 131
Query: 107 XXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 166
                   +   +  T       AAK  V   TR+LA E G  Y I  N + PG I ++ 
Sbjct: 132 AGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELG-KYNITANAVTPGLI-ESD 189
Query: 167 GVSKLAPEEIRSKATDYMAAYKF-GEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           GV K +P        + + A K  G+   IA    +LASD  +++ G TL VD G
Sbjct: 190 GV-KASPHNEAFGFVEMLQAMKGKGQPEHIADVVSFLASDDARWITGQTLNVDAG 243

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 18  LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRT 74
           LG    G+  +V   E    V+++  + FG +DILVN A     N L+  ++     +  
Sbjct: 56  LGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEE---WSD 112
Query: 75  VIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAA 134
           ++E +    F +    L+ + K                  + +       Q + +AAKA 
Sbjct: 113 IMETNLTSIFRLSKAVLRGMMK--------KRQGRIINVGSVVGTMGNAGQANYAAAKAG 164
Query: 135 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 194
           V   T+S+A E  +   + VN +APG I+    ++K   +E R+     + A + G+  +
Sbjct: 165 VIGFTKSMAREVAS-RGVTVNTVAPGFIETD--MTKALNDEQRTATLAQVPAGRLGDPRE 221
Query: 195 IAMAALYLASDAGKYVNGNTLIVDGGNWL 223
           IA A  +LAS    Y+ G TL V+GG ++
Sbjct: 222 IASAVAFLASPEAAYITGETLHVNGGMYM 250

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 89/219 (40%), Gaps = 10/219 (4%)
Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFL 61
           R++  +   VA L   G+   G    V K ED  R+V   +N  G +DILV NAA   F 
Sbjct: 46  RKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFF 105
Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTA 121
               D +   +  ++ ++   T +M    +  ++K                     H   
Sbjct: 106 GNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSV------GAYHPFP 159
Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
                +VS  K A+  +T++LA+E      IRVN +APG IK          +  +    
Sbjct: 160 NLGPYNVS--KTALLGLTKNLAVELA-PRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMK 216
Query: 182 DYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           + +   + G   D A    +L S+   Y+ G T++V GG
Sbjct: 217 ESLRIRRLGNPEDCAGIVSFLCSEDASYITGETVVVGGG 255

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Query: 125 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM 184
           Q +  AAKA V   ++SLA E  +   I VN +APG I  T    KL  E+    AT  +
Sbjct: 151 QTNYCAAKAGVIGFSKSLAYEVASRN-ITVNVVAPGFIA-TDXTDKLTDEQKSFIATK-I 207
Query: 185 AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW 222
            + + GE  DIA A  +LAS+  KY+ G TL V+GG +
Sbjct: 208 PSGQIGEPKDIAAAVAFLASEEAKYITGQTLHVNGGXY 245

>pdb|2O2S|A Chain A, The Structure Of T. Gondii Enoyl Acyl Carrier Protein Reductase In Complex With Nad And Triclosan Length = 315

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 59/118 (50%), Gaps = 15/118 (12%)
Query: 116 TLHYTAT-----WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA--GV 168
           TL Y A       Y   +S+AKAA++S TR+LA E G  Y +RVN I+ GP+K  A   +
Sbjct: 176 TLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAI 235
Query: 169 SKLAPEEIRSKATDYMAAYKFG------EKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            K   +     A DY  +Y            D+  AAL+L S   + V+G TL VD G
Sbjct: 236 GKSGEKSFIDYAIDY--SYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNG 291

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 80/187 (42%), Gaps = 13/187 (6%)
Query: 38  VVESTINHFGKLDILVN-AAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKK 96
           +VE  +  FG LD   N A A   +     LS  G+R  ++ +    F+    A KY   
Sbjct: 75  LVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFL----AAKY--- 127
Query: 97  XXXXXXXXXXXXXXXXXXATLHYTATWYQIH-VSAAKAAVDSITRSLALEWGTDYAIRVN 155
                             + + +TA +  +   +A+KA +  + ++LA+E G    IRVN
Sbjct: 128 -QVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGAR-GIRVN 185
Query: 156 GIAPGPIKDTAGVSKL--APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGN 213
            + PG     A  + L  A  E R       A  +     +IA AALYLASD   +V G 
Sbjct: 186 ALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASDGASFVTGA 245
Query: 214 TLIVDGG 220
            L+ DGG
Sbjct: 246 ALLADGG 252

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 17/189 (8%)
Query: 38  VVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL 94
           V+E     FG++DILVN A     N L+  +D   N    +IE +    F +    ++ +
Sbjct: 69  VLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWN---DIIETNLSSVFRLSKAVMRAM 125
Query: 95  KKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRV 154
            K                  + +       Q + +AAKA +   ++SLA E  +   I V
Sbjct: 126 MKKRHGRIITIG--------SVVGTMGNGGQANFAAAKAGLIGFSKSLAREVAS-RGITV 176
Query: 155 NGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNT 214
           N +APG I+    +++   ++ R+     + A + G   +IA A  +LASD   Y+ G T
Sbjct: 177 NVVAPGFIETD--MTRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGET 234
Query: 215 LIVDGGNWL 223
           L V+GG ++
Sbjct: 235 LHVNGGMYM 243

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 88/225 (39%), Gaps = 17/225 (7%)
Query: 8   LRSAVAALHSLGIP-AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAED 66
           L S  A L  LG    IG+  DV           + ++ FG LD+ V A AG F     D
Sbjct: 78  LSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALDV-VCANAGIFPEARLD 136
Query: 67  -LSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQ 125
            ++P     V++++  GT       L  L                    +++    T Y 
Sbjct: 137 TMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILT---------SSITGPVTGYP 187
Query: 126 --IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY 183
              H  A+KAA     R+ A+E      + VN I PG I  T G+  +  E I   A   
Sbjct: 188 GWSHYGASKAAQLGFMRTAAIEL-APRGVTVNAILPGNIL-TEGLVDMGEEYISGMARS- 244
Query: 184 MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRD 228
           +     G   DI   A +LA+D   Y+ G  ++VDGG  L    D
Sbjct: 245 IPMGMLGSPVDIGHLAAFLATDEAGYITGQAIVVDGGQVLPESPD 289

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/217 (23%), Positives = 91/217 (41%), Gaps = 21/217 (9%)
Query: 25  LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 84
           +E DV   +     ++     +G + +LVN A        E +S   +R +I+++  G +
Sbjct: 51  IECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYY 110
Query: 85  IMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
                A+ Y+ +                  + +   A+ Y      +K AV  +T+S+AL
Sbjct: 111 YASKFAIPYMIRSRDPSIVNISSVQA----SIITKNASAY----VTSKHAVIGLTKSIAL 162
Query: 145 EWGTDYAIRVNGIAPGPIKDTAGVSKLA-------PEEIRSKATDYMAAY---KFGEKWD 194
           ++     +R N + P  I DT  V K A       P  I  K +++   +   + G+  +
Sbjct: 163 DYAP--LLRCNAVCPATI-DTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQE 219
Query: 195 IAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPK 231
           +A A  +LAS    ++ G  L VDGG  +  P   P+
Sbjct: 220 VASAVAFLASREASFITGTCLYVDGGLSIRAPISTPE 256

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 17/209 (8%)
Query: 18  LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA---AGNFLVPAEDLSPNGFRT 74
           LG    G+  +V   E    V+++  + FG +DILVN A     N L+    +    +  
Sbjct: 56  LGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNADITRDNLLMR---MKEEEWSD 112
Query: 75  VIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAA 134
           ++E +    F +    L+ + K                  + +       Q + +AAKA 
Sbjct: 113 IMETNLTSIFRLSKAVLRGMMK--------KRQGRIINVGSVVGTMGNAGQANYAAAKAG 164
Query: 135 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 194
           V   T+S+A E  +   + VN +APG I+    ++K   +E R+     + A + G+  +
Sbjct: 165 VIGFTKSMAREVAS-RGVTVNTVAPGFIETD--MTKALNDEQRTATLAQVPAGRLGDPRE 221
Query: 195 IAMAALYLASDAGKYVNGNTLIVDGGNWL 223
           IA A  +LAS    Y+ G TL V+GG ++
Sbjct: 222 IASAVAFLASPEAAYITGETLHVNGGMYM 250

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 17/189 (8%)
Query: 38  VVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL 94
           V+E     FG++DILVN A     N L+  +D   N    +IE +    F +    ++ +
Sbjct: 69  VLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWN---DIIETNLSSVFRLSKAVMRAM 125
Query: 95  KKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRV 154
            K                  + +       Q + +AAKA +   ++SLA E  +   I V
Sbjct: 126 MKKRHGRIITIG--------SVVGTMGNGGQANYAAAKAGLIGFSKSLAREVAS-RGITV 176
Query: 155 NGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNT 214
           N +APG I+    +++   ++ R+     + A + G   +IA A  +LASD   Y+ G T
Sbjct: 177 NVVAPGFIETD--MTRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGET 234
Query: 215 LIVDGGNWL 223
           L V+GG ++
Sbjct: 235 LHVNGGMYM 243

>pdb|2O50|A Chain A, The Crystal Structure Of Toxoplasma Gondii Enoyl Acyl Carrier Protein Reductase Length = 315

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 53/100 (53%), Gaps = 10/100 (10%)
Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA--GVSKLAPEEIRSKATDYMAA 186
           S+AKAA++S TR+LA E G  Y +RVN I+ GP+K  A   + K   +     A DY  +
Sbjct: 194 SSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSFIDYAIDY--S 251
Query: 187 YKFG------EKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           Y            D+  AAL+L S   + V+G TL VD G
Sbjct: 252 YNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNG 291

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 86/196 (43%), Gaps = 15/196 (7%)
Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           ++  +E+   ++  T N    LDILV  A       A  +    F  VI+I+    FI+ 
Sbjct: 68  NLANKEECSNLISKTSN----LDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILN 123
Query: 88  HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 147
            EA+K + +                  + +       Q +  A+KA +  +T+SL+ E  
Sbjct: 124 REAIKKMIQKRYGRIINIS--------SIVGIAGNPGQANYCASKAGLIGMTKSLSYEVA 175
Query: 148 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 207
           T   I VN +APG IK  + ++    E+ R      +    +G   D+A A  +LAS+  
Sbjct: 176 T-RGITVNAVAPGFIK--SDMTDKLNEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNA 232
Query: 208 KYVNGNTLIVDGGNWL 223
            Y+ G TL V+GG  +
Sbjct: 233 SYITGQTLHVNGGMLM 248

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 129 SAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAA 186
           +A+K AV  +++S AL+    DY +RVN + PG IK T  V  L   EE  S+ T     
Sbjct: 156 NASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIK-TPLVDDLPGAEEAMSQRTKTPMG 214
Query: 187 YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           +  GE  DIA   +YLAS+  K+  G+  +VDGG
Sbjct: 215 H-IGEPNDIAYICVYLASNESKFATGSEFVVDGG 247

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 72/174 (41%), Gaps = 9/174 (5%)
Query: 47  GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXX 106
           G +DILVN A+    V  +D+  + +R +I+++  GTFI+        +           
Sbjct: 79  GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQXR-------AAGK 131
Query: 107 XXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 166
                   +   +  T       AAK  V   TR+LA E G  Y I  N + PG I ++ 
Sbjct: 132 AGRVISIASNTFFAGTPNXAAYVAAKGGVIGFTRALATELGK-YNITANAVTPGLI-ESD 189
Query: 167 GVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           GV      E         A    G+   IA    +LASD  +++ G TL VD G
Sbjct: 190 GVKASPHNEAFGFVEXLQAXKGKGQPEHIADVVSFLASDDARWITGQTLNVDAG 243

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 129 SAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAA 186
           +A+K AV  +++S AL+    DY +RVN + PG IK T  V  L   EE  S+ T     
Sbjct: 156 NASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIK-TPLVDDLPGAEEAMSQRTKTPMG 214
Query: 187 YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           +  GE  DIA   +YLAS+  K+  G+  +VDGG
Sbjct: 215 H-IGEPNDIAYICVYLASNESKFATGSEFVVDGG 247

>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 73/185 (39%), Gaps = 12/185 (6%)
Query: 40  ESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXX 99
           E  +   G +D+LVN AA   L P  +++   F    E++      +     + L     
Sbjct: 68  ERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGV 127
Query: 100 XXXXXXXXXXXXXXXATLH--YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI 157
                           T H  Y +T         K A+D +T+ +ALE G  + IRVN +
Sbjct: 128 PGAIVNVSSQCSQRAVTNHSVYCST---------KGALDMLTKVMALELG-PHKIRVNAV 177
Query: 158 APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIV 217
            P  +  + G +  +         + +   KF E   +  A L+L SD      G+TL V
Sbjct: 178 NPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPV 237
Query: 218 DGGNW 222
           +GG W
Sbjct: 238 EGGFW 242

>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 74/185 (40%), Gaps = 12/185 (6%)
Query: 40  ESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXX 99
           E  +   G +D+LVN AA   L P  +++   F    E++      +     + L     
Sbjct: 68  ERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGV 127
Query: 100 XXXXXXXXXXXXXXXATLH--YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI 157
                           T H  Y +T         K A+D +T+ +ALE G  + IRVN +
Sbjct: 128 PGAIVNVSSQXSQRAVTNHSVYCST---------KGALDMLTKVMALELG-PHKIRVNAV 177
Query: 158 APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIV 217
            P  +  + G +  +         + +   KF E   +  A L+L SD      G+TL V
Sbjct: 178 NPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPV 237
Query: 218 DGGNW 222
           +GG W
Sbjct: 238 EGGFW 242

>pdb|3F4B|A Chain A, Crystal Structure Of Plasmodium Berghei Enoyl-Acyl-Carrier- Protein Reductase With Triclosan Length = 323

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 85/218 (38%), Gaps = 48/218 (22%)
Query: 44  NHFGKLDILVNAAAGNFLVPAE--DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXX 101
           N +GK+ +LV++ A    V     D S +G+   I   S     +C    K++       
Sbjct: 116 NKYGKISMLVHSLANGREVQKSLLDTSRDGYLDAISKSSYSLISLCKHFCKFMN------ 169
Query: 102 XXXXXXXXXXXXXATLHYTATW-----YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG 156
                         +L Y A+      Y   +S+AKAA++S TR LA   G  Y IR+N 
Sbjct: 170 --------SGGSVVSLTYQASQKVVPGYGGGMSSAKAALESDTRVLAYYLGRKYNIRINT 221
Query: 157 IAPGPIKDTAGV--------------SKLAPEEIRSKATDYMAAYKFGEKW--------- 193
           I+ GP+K  A                S    ++      DY  A  + EK+         
Sbjct: 222 ISAGPLKSRAATAINKFNNNQKNNMNSSGETDKQNYSFIDY--AIDYSEKYAPLKKKLLS 279
Query: 194 -DIAMAALYLASDAGKYVNGNTLIVDGG-NWLSNPRDL 229
            D+   A +L S     V G T+ VD G N +  P DL
Sbjct: 280 TDVGSVASFLLSKESSAVTGQTIYVDNGLNIMFGPDDL 317

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 25/183 (13%)
Query: 48  KLDILVNAAA---GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXX 104
           K DIL+N A    G F+   E+ +   F   + +++   F +  +AL  L+         
Sbjct: 91  KFDILINNAGIGPGAFI---EETTEQFFDRXVSVNAKAPFFIIQQALSRLRDNSRII--- 144
Query: 105 XXXXXXXXXXATLHYTATWYQ----IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160
                       +   AT       I  S  K A+++ T +LA + G    I VN I PG
Sbjct: 145 -----------NISSAATRISLPDFIAYSXTKGAINTXTFTLAKQLGA-RGITVNAILPG 192
Query: 161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            +K       L+    +  AT   A  + GE  DIA  A +LAS   ++V G  + V GG
Sbjct: 193 FVKTDXNAELLSDPXXKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGG 252
Query: 221 NWL 223
           + L
Sbjct: 253 SCL 255

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 16/190 (8%)
Query: 37  RVVESTINH----FGKLDILV-NAAAGNFLVPAEDL-SPNGFRTVIEIDSVGTFIMCHEA 90
           + VE TI+     FG +D+ V NA       P  D+ + + +  +I +D  G +   H  
Sbjct: 96  KSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNI 155
Query: 91  LKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 150
            K  KK                            Q   + AKAA   + +SLA+EW    
Sbjct: 156 GKIFKKNGKGSLIITSSISGKIVNIPQ------LQAPYNTAKAACTHLAKSLAIEWAP-- 207
Query: 151 AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYV 210
             RVN I+PG I DT  ++  A +++++K        + G   ++    LYLAS+A  + 
Sbjct: 208 FARVNTISPGYI-DT-DITDFASKDMKAKWWQLTPLGREGLTQELVGGYLYLASNASTFT 265
Query: 211 NGNTLIVDGG 220
            G+ +++DGG
Sbjct: 266 TGSDVVIDGG 275

>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 96/232 (41%), Gaps = 26/232 (11%)
Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAED 66
           L   V  + +LG   I  + DVR  +     V+  +   G+LDI++ NAA  +       
Sbjct: 77  LAETVRQVEALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNR 136
Query: 67  LSPNGFRTVIEIDSVGTFIMCHEALKYLK--KXXXXXXXXXXXXXXXXXXATLHYTATWY 124
           + P  +R +I+++  G +I    A+ ++   K                     +Y A+ +
Sbjct: 137 MDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKH 196
Query: 125 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK-----LAPEEIRSK 179
            +H          + R++ALE G    IRVN + P  +     +++       P+     
Sbjct: 197 GLH---------GLMRTMALELGP-RNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPT 246
Query: 180 ATDYMAAYK--------FGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 223
             D+  A +        + E  DI+ A L+L SD  +Y+ G +L VDGG  L
Sbjct: 247 VEDFQVASRQMHVLPIPYVEPADISNAILFLVSDDARYITGVSLPVDGGALL 298

>pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Agrobacterium Tumefaciens Length = 259

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 87/213 (40%), Gaps = 17/213 (7%)
Query: 15  LHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAE---DLSPNG 71
           +  LG  A+ ++ D+    +    + +  + FG++  LV+ A G  L+  +   ++    
Sbjct: 53  IEKLGRSALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGG--LIARKTIAEMDEAF 110
Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAA 131
           +  V++++    F+    AL  + K                    L Y         + +
Sbjct: 111 WHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPGALAY---------ATS 161
Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 191
           K AV + TR LA E G    IRVN + PG I  T   +   P E+R +     +  + G 
Sbjct: 162 KGAVMTFTRGLAKEVGPK--IRVNAVCPGMISTTFHDTFTKP-EVRERVAGATSLKREGS 218
Query: 192 KWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 224
             D+A    +LASD   YV G    ++GG   S
Sbjct: 219 SEDVAGLVAFLASDDAAYVTGACYDINGGVLFS 251

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 53/235 (22%), Positives = 94/235 (40%), Gaps = 22/235 (9%)
Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEG---DVRKREDAVRVVESTINHFGKLDILVNAAAG 58
           GR +  L      +   G+PA  +     DV +      ++ +T+  FGK+DILVN A  
Sbjct: 57  GRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGA 116
Query: 59  NFL--VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXAT 116
           N        D     ++   +++      M  +  ++L K                  + 
Sbjct: 117 NLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSG 176
Query: 117 LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI 176
             Y A         AKAA+D  TR  A++    + +RVN ++PG +      +   PE  
Sbjct: 177 YPYYA--------CAKAALDQYTRCTAIDL-IQHGVRVNSVSPGAVATGFMGAMGLPETA 227
Query: 177 RSKATDYMAAYK-------FGEKWDIAMAALYLAS-DAGKYVNGNTLIVDGGNWL 223
             K   ++ + K        G+  +IA   ++LA  +   Y+ G +++ DGG+ L
Sbjct: 228 SDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTL 282

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/227 (22%), Positives = 90/227 (39%), Gaps = 21/227 (9%)
Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
           L+  V  +   G   I  + DVR       VV+  +  FG +DILV+    +       L
Sbjct: 95  LKETVRLVEEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSL 154
Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIH 127
           +   +  +++ + +G +  C   L  + +                  +T+       Q H
Sbjct: 155 TDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVS-------STVGLRGAPGQSH 207
Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK-----LAPE---EIRSK 179
            +A+K  V  +  SLA E G  + IRVN + PG +     +++       P      R  
Sbjct: 208 YAASKHGVQGLMLSLANEVGR-HNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTRED 266
Query: 180 ATDYMAAYKF-----GEKWDIAMAALYLASDAGKYVNGNTLIVDGGN 221
           A +  +          E  D++ A  +LASD  +Y++G  + VDGG 
Sbjct: 267 AAELFSQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQ 313

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 88/208 (42%), Gaps = 25/208 (12%)
Query: 25  LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 84
           +E DV   +     ++     +G + +LVN A        E +S   +R +I+++  G +
Sbjct: 58  IECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYY 117
Query: 85  IMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
                A+ Y+ +                  + +   A+ Y      +K AV  +T+S+AL
Sbjct: 118 YASKFAIPYMIRSRDPSIVNISSVQA----SIITKNASAY----VTSKHAVIGLTKSIAL 169
Query: 145 EWGTDYA--IRVNGIAPGPIKDTAGVSKLA-------PEEIRSKATDYMAAY---KFGEK 192
               DYA  +R N + P  I DT  V K A       P  I  K +++   +   + G+ 
Sbjct: 170 ----DYAPLLRCNAVCPATI-DTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKP 224
Query: 193 WDIAMAALYLASDAGKYVNGNTLIVDGG 220
            ++A A  +LAS    ++ G  L VDGG
Sbjct: 225 QEVASAVAFLASREASFITGTCLYVDGG 252

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 93/209 (44%), Gaps = 23/209 (11%)
Query: 23  IGLEGDVRKREDAVRVVESTINHFGKLDILVNAA---AGNFLVPAEDLSPNGFRTVIEID 79
            G+E DV   +   R   +   H G +++LV+ A   A  FL+    ++   F  VI  +
Sbjct: 56  FGVECDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLM---RMTEEKFEKVINAN 112
Query: 80  SVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATW---YQIHVSAAKAAVD 136
             G F +   A + +++                       + +W    Q + +A+KA V 
Sbjct: 113 LTGAFRVAQRASRSMQRNKFGRMIFIGS-----------VSGSWGIGNQANYAASKAGVI 161
Query: 137 SITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA 196
            + RS+A E  +   +  N +APG I DT  +++   E I+  A  ++ A + G   ++A
Sbjct: 162 GMARSIAREL-SKANVTANVVAPGYI-DT-DMTRALDERIQQGALQFIPAKRVGTPAEVA 218
Query: 197 MAALYLASDAGKYVNGNTLIVDGGNWLSN 225
               +LAS+   Y++G  + VDGG  + +
Sbjct: 219 GVVSFLASEDASYISGAVIPVDGGMGMGH 247

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 79/195 (40%), Gaps = 10/195 (5%)
Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFL--VPAEDLSPNGFRTVIEIDSVGTFI 85
           DV   E     V S     G++DILV A AG  +  V AED++   +   ++I+  G F 
Sbjct: 70  DVTNTESVQNAVRSVHEQEGRVDILV-ACAGICISEVKAEDMTDGQWLKQVDINLNGMFR 128
Query: 86  MCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALE 145
            C    + + +                  + L       Q   +A+KA V    RSLA E
Sbjct: 129 SCQAVGRIMLEQKQGVIVAIGSM------SGLIVNRPQQQAAYNASKAGVHQYIRSLAAE 182
Query: 146 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 205
           W   + IR N +AP  I+ T     +   E+           + G+  ++A    +LASD
Sbjct: 183 WAP-HGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLASD 241
Query: 206 AGKYVNGNTLIVDGG 220
           A   + G  + VD G
Sbjct: 242 AASLMTGAIVNVDAG 256

>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 88/210 (41%), Gaps = 22/210 (10%)
Query: 28  DVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 86
           DVR  E     V+S +   G+LDI+V NA  G        +  N ++ +I+I+  G +  
Sbjct: 84  DVRDFEALKSAVDSGVEQLGRLDIIVANAGVGTDGRKLHKIRDNVWQDMIDINLTGVWHT 143
Query: 87  CHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEW 146
               + ++                        Y  T + I   AAK  V  + R+ A+E 
Sbjct: 144 VKAGVPHVLSGGRGGSIVLTSSVGGRKA----YPNTGHYI---AAKHGVIGLMRAFAVEL 196
Query: 147 GTDYAIRVNGIAPGPIKDTAGVS----KLAPEEIRSKATDYMA-----AYKFGEKW---- 193
           G  + IRVN + P  +  T  ++    +L   ++ +   D  A      +     W    
Sbjct: 197 GP-HMIRVNAVLPTQVSTTMVMNDQTFRLFRPDLENPGPDDFAPISQMMHTLPVPWVDAS 255
Query: 194 DIAMAALYLASDAGKYVNGNTLIVDGGNWL 223
           DI+ A L+LASD  +YV G +L VD G+ L
Sbjct: 256 DISNAVLFLASDESRYVTGVSLPVDAGSLL 285

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 18/219 (8%)
Query: 9   RSAVAA------LHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
           RSA AA      + + G  AI   GDV K  D   ++++ I+ +G +D++VN A      
Sbjct: 34  RSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDT 93
Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTAT 122
               +  + +  VI+++  G F+    A K + K                  + +     
Sbjct: 94  LLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMK--------KRKGRIINIASVVGLIGN 145
Query: 123 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD 182
             Q + +AAKA V   +++ A E G    I VN + PG I      +KL  E++  K   
Sbjct: 146 IGQANYAAAKAGVIGFSKTAARE-GASRNINVNVVCPGFIASDM-TAKLG-EDMEKKILG 202
Query: 183 YMAAYKFGEKWDIAMAALYLA-SDAGKYVNGNTLIVDGG 220
            +   + G+  ++A    +LA S A  Y+ G    +DGG
Sbjct: 203 TIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTIDGG 241

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 125 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM 184
           Q + +A+KA V  +T++ A E G  + IR N + PG I     +++  P+++  K T+ +
Sbjct: 162 QTNYAASKAGVIGLTQTAARELGR-HGIRCNSVLPGFIATP--MTQKVPQKVVDKITEMI 218
Query: 185 AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 224
                G+  D+A    +LAS+   Y+ G ++ V GG +++
Sbjct: 219 PMGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGGLFMA 258

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 125 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM 184
           Q +  A+KA +   ++SLA E  +   + VN IAPG I ++A   KL  E+ +      +
Sbjct: 150 QANYCASKAGLIGFSKSLAQEIASRN-VTVNCIAPGFI-ESAMTGKL-NEKQKDAIMGNI 206
Query: 185 AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
              + G   DIA A +YLASD   YV G TL V+GG
Sbjct: 207 PMKRMGVGADIAAAVVYLASDEAAYVTGQTLHVNGG 242

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/226 (21%), Positives = 90/226 (39%), Gaps = 25/226 (11%)
Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
           R    L+     +  +G  A+ +  DV + +    +++      G +DI V  A    + 
Sbjct: 64  RHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQ 123
Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTAT 122
              D+    F+ + + +  G F+    A + +                       H    
Sbjct: 124 AMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSG------HIINI 177
Query: 123 WYQI-HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
             Q+ H   +KAAV  +T+++A+E    + IRVN ++PG I+           E+     
Sbjct: 178 PQQVSHYCTSKAAVVHLTKAMAVEL-APHQIRVNSVSPGYIR----------TELVEPLA 226
Query: 182 DYMAAY-------KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           DY A +       + G   ++    LYLAS A  Y+ G+ +++DGG
Sbjct: 227 DYHALWEPKIPLGRMGRPEELTGLYLYLASAASSYMTGSDIVIDGG 272

>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 91/218 (41%), Gaps = 39/218 (17%)
Query: 18  LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA--EDLSPNGFRTV 75
           LG  ++ +  DV    D   V+ +     G L++LVN A    L+P   E      F  +
Sbjct: 50  LGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAG--ILLPGDMETGRLEDFSRL 107
Query: 76  IEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIH----VSAA 131
           ++I++   FI C + +  +K+                    +   ++W  I      SA+
Sbjct: 108 LKINTESVFIGCQQGIAAMKETGGSII-------------NMASVSSWLPIEQYAGYSAS 154
Query: 132 KAAVDSITRSLALEW-GTDYAIRVNGIAPG----PIKDTA---GVSK---LAPEEIRSKA 180
           KAAV ++TR+ AL      YAIRVN I P     P+   +   GVSK   L   ++    
Sbjct: 155 KAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAG 214
Query: 181 TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVD 218
             YM          IA   L+LASD    ++G+ L  D
Sbjct: 215 RAYMPER-------IAQLVLFLASDESSVMSGSELHAD 245

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 80/186 (43%), Gaps = 32/186 (17%)
Query: 38  VVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL 94
           V+E     FG++DILVN A     N L+  +D   N    +IE +    F +    ++ +
Sbjct: 69  VLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWN---DIIETNLSSVFRLSKAVMRAM 125
Query: 95  KKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRV 154
            K                            Q + +AAKA +   ++SLA E  +   I V
Sbjct: 126 MKKRHG-----------------RIITIGGQANYAAAKAGLIGFSKSLAREVAS-RGITV 167
Query: 155 NGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNT 214
           N +APG I+ +        ++ R+     + A + G   +IA A  +LASD   Y+ G T
Sbjct: 168 NVVAPGFIETS--------DDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGET 219
Query: 215 LIVDGG 220
           L V+GG
Sbjct: 220 LHVNGG 225

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 125 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM 184
           Q +  A+KA +   ++SLA E  +   + VN IAPG I ++A   KL  E+ +      +
Sbjct: 153 QANYCASKAGLIGFSKSLAQEIASRN-VTVNCIAPGFI-ESAMTGKL-NEKQKDAIMGNI 209
Query: 185 AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
              + G   DIA A +YLASD   YV G TL V+GG
Sbjct: 210 PMKRMGVGADIAAAVVYLASDEAAYVTGQTLHVNGG 245

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 20/210 (9%)
Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIE 77
           G+   G   D+  R +  +++++  + F GKL+ILVN A       A+D +   +  ++ 
Sbjct: 69  GLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMG 128
Query: 78  IDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDS 137
            +         EA  +L +                  +   ++A       SA+K A++ 
Sbjct: 129 TN--------FEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQ 180
Query: 138 ITRSLALEWGTDYAIRVNGIAPG----PIKDTAGVSKLAPEEIRSKATDYMAAY---KFG 190
           +T+SLA EW  D  IRVN +APG    P+ +TA   K  P + + +  +++      + G
Sbjct: 181 MTKSLACEWAKD-NIRVNSVAPGVILTPLVETA--IKKNPHQ-KEEIDNFIVKTPMGRAG 236
Query: 191 EKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           +  +++    +L   A  Y+ G  +  DGG
Sbjct: 237 KPQEVSALIAFLCFPAASYITGQIIWADGG 266

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 89/196 (45%), Gaps = 10/196 (5%)
Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           D+     A R+ ++      +LDILVN A  ++    E    +G+  V++++    F   
Sbjct: 85  DLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCI 144
Query: 88  HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHV-SAAKAAVDSITRSLALEW 146
            + L  L++                  +    +A   Q +    +KAA+  ++R LA E 
Sbjct: 145 QQLLPLLRR----SASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKEL 200
Query: 147 GTDYAIRVNGIAPG--PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 204
             ++ I VN IAPG  P + T  ++   P+ + + +   +   ++G   ++A  A+ LA 
Sbjct: 201 VGEH-INVNVIAPGRFPSRMTRHIAN-DPQALEADSAS-IPMGRWGRPEEMAALAISLAG 257
Query: 205 DAGKYVNGNTLIVDGG 220
            AG Y+ GN + +DGG
Sbjct: 258 TAGAYMTGNVIPIDGG 273

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 23/209 (11%)
Query: 23  IGLEGDVRKREDAVRVVESTINHFGKLDILVNAA---AGNFLVPAEDLSPNGFRTVIEID 79
            G+E DV   +   R   +   H G +++LV+ A   A  FL+    ++   F  VI  +
Sbjct: 76  FGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLM---RMTEEKFEKVINAN 132
Query: 80  SVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATW---YQIHVSAAKAAVD 136
             G F +   A + +++                       +  W    Q + +A+KA V 
Sbjct: 133 LTGAFRVAQRASRSMQRNKFGRMIFIAS-----------VSGLWGIGNQANYAASKAGVI 181
Query: 137 SITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA 196
            + RS+A E  +   +  N +APG I DT  +++   E I+  A  ++ A + G   ++A
Sbjct: 182 GMARSIAREL-SKANVTANVVAPGYI-DTD-MTRALDERIQQGALQFIPAKRVGTPAEVA 238
Query: 197 MAALYLASDAGKYVNGNTLIVDGGNWLSN 225
               +LAS+   Y++G  + VDGG  + +
Sbjct: 239 GVVSFLASEDASYISGAVIPVDGGMGMGH 267

>pdb|3PXX|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nicotinamide Adenine Dinucleotide Length = 287

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 78/212 (36%), Gaps = 17/212 (8%)
Query: 26  EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 85
           E DVR R    R + + +  FGKLD++V A AG   + A  L    F    ++D VG   
Sbjct: 77  EVDVRDRAAVSRELANAVAEFGKLDVVV-ANAGICPLGAH-LPVQAFADAFDVDFVGVIN 134
Query: 86  MCHEALKYLKK-XXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
             H AL YL                                   S AK  VDS T  LA 
Sbjct: 135 TVHAALPYLTSGASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAA 194
Query: 145 EWGTDYAIRVNGIAPGPIKDTAGVS-----KLAPEEIRSKATDYMAAY--------KFGE 191
           +     +IR N I P  +      S     +  P+       D + A+         + E
Sbjct: 195 QLAPQ-SIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAMQAMPTPYVE 253
Query: 192 KWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 223
             DI+ A  +LASD  +YV G    VD G  L
Sbjct: 254 ASDISNAVCFLASDESRYVTGLQFKVDAGAML 285

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 23/209 (11%)
Query: 23  IGLEGDVRKREDAVRVVESTINHFGKLDILVNAA---AGNFLVPAEDLSPNGFRTVIEID 79
            G+E DV   +   R   +   H G +++LV+ A   A  FL+    ++   F  VI  +
Sbjct: 56  FGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLM---RMTEEKFEKVINAN 112
Query: 80  SVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATW---YQIHVSAAKAAVD 136
             G F +   A + +++                       +  W    Q + +A+KA V 
Sbjct: 113 LTGAFRVAQRASRSMQRNKFGRMIFIGS-----------VSGLWGIGNQANYAASKAGVI 161
Query: 137 SITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA 196
            + RS+A E  +   +  N +APG I DT  +++   E I+  A  ++ A + G   ++A
Sbjct: 162 GMARSIAREL-SKANVTANVVAPGYI-DT-DMTRALDERIQQGALQFIPAKRVGTPAEVA 218
Query: 197 MAALYLASDAGKYVNGNTLIVDGGNWLSN 225
               +LAS+   Y++G  + VDGG  + +
Sbjct: 219 GVVSFLASEDASYISGAVIPVDGGMGMGH 247

>pdb|2XOX|A Chain A, Crystal Structure Of Pteridine Reductase (Ptr1) From Leishmania Donovani Length = 288

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 81/200 (40%), Gaps = 18/200 (9%)
Query: 38  VVESTINHFGKLDILVNAAAGNFLVPA----ED--LSPNGFRTVIEIDSVGTFIMCHEAL 91
           +V +   H+G+ D+LVN A+  +  P     ED  +   G R  +E  +   F     A 
Sbjct: 92  LVAACYTHWGRCDVLVNNASSFYPTPLLRKDEDGHVPCVGDREAMEAAAADLFGSNAMAP 151
Query: 92  KYLKKXXXXXXXXXXXXXXXXXXATLHYTATW-------YQIHVSAAKAAVDSITRSLAL 144
            +L K                  + ++            Y I+ + AK A++ +TRS AL
Sbjct: 152 YFLIKAFAHRVADTPAEQRGTNYSIVNMVDAMTSQPLLGYTIY-TMAKGALEGLTRSAAL 210
Query: 145 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 204
           E      IRVNG+ PG       +     E+ RSK   Y       E  D+    ++L S
Sbjct: 211 ELAP-LQIRVNGVGPGLSVLADDMPPAVREDYRSKVPLYQRDSSAAEVSDVV---IFLCS 266
Query: 205 DAGKYVNGNTLIVDGGNWLS 224
              KYV G  + VDGG  L+
Sbjct: 267 SKAKYVTGTCVKVDGGYSLT 286

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 81/204 (39%), Gaps = 31/204 (15%)
Query: 42  TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXX 101
           T   +G++DILVN A      P        +R +I+++  G+++M    +  +       
Sbjct: 75  TTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVM------- 127
Query: 102 XXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA--IRVNGIAP 159
                        +   Y AT        +K A+  +TRS+A+    DYA  IR N + P
Sbjct: 128 -LAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAI----DYAPKIRCNAVCP 182
Query: 160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW-------------DIAMAALYLASDA 206
           G I  T  V K A  E+     D  A  +  E+W             ++A    +LASD 
Sbjct: 183 GTIM-TPMVIKAAKMEV---GEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDR 238
Query: 207 GKYVNGNTLIVDGGNWLSNPRDLP 230
             ++ G  L VDGG     P   P
Sbjct: 239 SSFITGACLTVDGGLLSKLPISTP 262

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 125 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM 184
           Q +  AAKA +   +++LA E  +   I VN IAPG IK +A   KL  E+ +      +
Sbjct: 170 QTNYCAAKAGLIGFSKALAQEIASRN-ITVNCIAPGFIK-SAMTDKL-NEKQKEAIMAMI 226
Query: 185 AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
              + G   +IA A +YLASD   Y+ G TL ++GG
Sbjct: 227 PMKRMGIGEEIAFATVYLASDEAAYLTGQTLHINGG 262

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Query: 125 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM 184
           Q + +AAKA V   T+S A E  +   + VN +APG I+     +K   +E R+     +
Sbjct: 152 QANYAAAKAGVIGFTKSXAREVAS-RGVTVNTVAPGFIETDX--TKALNDEQRTATLAQV 208
Query: 185 AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW 222
            A + G+  +IA A  +LAS    Y+ G TL V+GG +
Sbjct: 209 PAGRLGDPREIASAVAFLASPEAAYITGETLHVNGGXY 246

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 14/193 (7%)
Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           D  + E A + +E T    G +++L+  A          +S   F +V+E +  GTF + 
Sbjct: 70  DTEQVEQAYKEIEET---HGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVV 126
Query: 88  HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 147
             A + + +                  + +    +  Q + +A+KA +    RSLA E G
Sbjct: 127 KRANRAMLRAKKGRVVLIS--------SVVGLLGSAGQANYAASKAGLVGFARSLARELG 178
Query: 148 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 207
           +   I  N +APG + DT  ++K+  +E R+     +   ++    +IA    +LASD  
Sbjct: 179 S-RNITFNVVAPGFV-DT-DMTKVLTDEQRANIVSQVPLGRYARPEEIAATVRFLASDDA 235
Query: 208 KYVNGNTLIVDGG 220
            Y+ G  + VDGG
Sbjct: 236 SYITGAVIPVDGG 248

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 85/199 (42%), Gaps = 15/199 (7%)
Query: 25  LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAE---DLSPNGFRTVIEIDSV 81
           ++ DV K+ED  ++VE  ++HFGK+D L+N  AG ++   +   D   + +  +I+ +  
Sbjct: 62  VQADVTKKEDLHKIVEEAMSHFGKIDFLIN-NAGPYVFERKKLVDYEEDEWNEMIQGNLT 120
Query: 82  GTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRS 141
             F +    +  ++K                    ++ +A       +AAK  + S+T++
Sbjct: 121 AVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSA------FAAAKVGLVSLTKT 174
Query: 142 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIAMAAL 200
           +A E   +Y I  N + PG   D  G  K A  +E R          + G   DIA    
Sbjct: 175 VAYEEA-EYGITANMVCPG---DIIGEMKEATIQEARQLKEHNTPIGRSGTGEDIARTIS 230
Query: 201 YLASDAGKYVNGNTLIVDG 219
           +L  D    + G  + V G
Sbjct: 231 FLCEDDSDMITGTIIEVTG 249

>pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Reductase (Tm1169) From Thermotoga Maritima At 2.50 A Resolution Length = 249

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK 188
           ++A+ A+    ++L+ E    Y I VN +APG   +T  V +L  EE + +    +   +
Sbjct: 154 NSARMALTGFLKTLSFEVAP-YGITVNCVAPG-WTETERVKELLSEEKKKQVESQIPMRR 211
Query: 189 FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             +  +IA    +L S+   Y+ G T++VDGG
Sbjct: 212 MAKPEEIASVVAFLCSEKASYLTGQTIVVDGG 243

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 52/221 (23%), Positives = 87/221 (39%), Gaps = 17/221 (7%)
Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS 68
           ++  + ++  G  A+ ++ DV  R+     VE      G  D++VN A      P E ++
Sbjct: 40  KAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESIT 99
Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHV 128
           P     V  I+  G       A++  KK                     H       ++ 
Sbjct: 100 PEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAG------HVGNPELAVY- 152
Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA------GVSKLAPEEIRSKATD 182
           S++K AV  +T++ A +      I VNG  PG +K          VS+ A + +     +
Sbjct: 153 SSSKFAVRGLTQTAARDL-APLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAE 211
Query: 183 YMAAYKFG---EKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           +      G   E  D+A    YLAS    Y+ G +L++DGG
Sbjct: 212 FAKRITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGG 252

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/224 (25%), Positives = 92/224 (41%), Gaps = 23/224 (10%)
Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
           +R+ +AA H  G+  +    D+ K E    +V++ +   G++DILVN A        ED 
Sbjct: 45  VRAGLAAQH--GVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDF 102
Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLH-YTATWYQI 126
               +  ++ ++    F     AL ++KK                  A+ H   A+  + 
Sbjct: 103 PTEKWDAILALNLSAVFHGTAAALPHMKK---------QGFGRIINIASAHGLVASANKS 153
Query: 127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD---TAGVSKLAPEE-------I 176
              AAK  V   T+  ALE      I  N I PG ++       +S LA +         
Sbjct: 154 AYVAAKHGVVGFTKVTALET-AGQGITANAICPGWVRSPLVEKQISALAEKNGVDQETAA 212
Query: 177 RSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           R   ++   + +F     +   A++LASDA   + G T+ VDGG
Sbjct: 213 RELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG 256

>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 79/187 (42%), Gaps = 20/187 (10%)
Query: 38  VVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKX 97
           V    +  FG+L  + + A       + +L    +  V+ ++  G+F++  +A + L++ 
Sbjct: 70  VFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG 129
Query: 98  XXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI 157
                            A           H +A K  V  + R+LALE      +RVN +
Sbjct: 130 GSLVLTGSVAGLGAFGLA-----------HYAAGKLGVVGLARTLALELARK-GVRVNVL 177
Query: 158 APGPIKD--TAGVSKLAPE-EIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNT 214
            PG I+   TAG+   A E E+ +         + G   ++A AAL+L S+   Y+ G  
Sbjct: 178 LPGLIQTPMTAGLPPWAWEQEVGASPLG-----RAGRPEEVAQAALFLLSEESAYITGQA 232
Query: 215 LIVDGGN 221
           L VDGG 
Sbjct: 233 LYVDGGR 239

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 93/225 (41%), Gaps = 25/225 (11%)
Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
           +R+ +AA H  G+  +    D+ K E    +V++ +   G++DILVN A        ED 
Sbjct: 45  VRAGLAAQH--GVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDF 102
Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLH-YTATWYQI 126
               +  ++ ++    F     AL ++KK                  A+ H   A+  + 
Sbjct: 103 PTEKWDAILALNLSAVFHGTAAALPHMKK---------QGFGRIINIASAHGLVASANKS 153
Query: 127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG----PIKDTAGVSKLAPEE------- 175
              AAK  V   T+  ALE      I  N I PG    P+ +   +S LA +        
Sbjct: 154 AYVAAKHGVVGFTKVTALET-AGQGITANAICPGWVRTPLVEKQ-ISALAEKNGVDQETA 211
Query: 176 IRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            R   ++   + +F     +   A++LASDA   + G T+ VDGG
Sbjct: 212 ARELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG 256

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 93/225 (41%), Gaps = 25/225 (11%)
Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
           +R+ +AA H  G+  +    D+ K E    +V++ +   G++DILVN A        ED 
Sbjct: 45  VRAGLAAQH--GVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDF 102
Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLH-YTATWYQI 126
               +  ++ ++    F     AL ++KK                  A+ H   A+  + 
Sbjct: 103 PTEKWDAILALNLSAVFHGTAAALPHMKK---------QGFGRIINIASAHGLVASANKS 153
Query: 127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG----PIKDTAGVSKLAPEE------- 175
              AAK  V   T+  ALE      I  N I PG    P+ +   +S LA +        
Sbjct: 154 AYVAAKHGVVGFTKVTALET-AGQGITANAICPGWVRAPLVEKQ-ISALAEKNGVDQETA 211
Query: 176 IRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            R   ++   + +F     +   A++LASDA   + G T+ VDGG
Sbjct: 212 ARELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG 256

>pdb|1P33|A Chain A, Pteridine Reductase From Leishmania Tarentolae Complex With Nadph And Mtx Length = 289

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 18/200 (9%)
Query: 38  VVESTINHFGKLDILVNAAAGNFLVP------AEDLSPNGFRTVIEIDSVGTFIMCHEAL 91
           +V++   H+G+ D+LVN A+  +  P       E  S  G +  +E+ +   F     A 
Sbjct: 93  LVDACYMHWGRCDVLVNNASSFYPTPLLRKDAGEGGSSVGDKESLEVAAADLFGSNAIAP 152
Query: 92  KYLKKXXXXXXXXXXXXXXXXXXATLHYTATW-------YQIHVSAAKAAVDSITRSLAL 144
            +L K                  + ++            Y ++ + AK A++ +TRS AL
Sbjct: 153 YFLIKAFAQRVADTRAEQRGTSYSIVNMVDAMTSQPLLGYTMY-TMAKEALEGLTRSAAL 211
Query: 145 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 204
           E  +   IRVNG++PG       +     E+ R K   Y       E  D+    ++L S
Sbjct: 212 ELAS-LQIRVNGVSPGLSVLPDDMPFSVQEDYRRKVPLYQRNSSAEEVSDVV---IFLCS 267
Query: 205 DAGKYVNGNTLIVDGGNWLS 224
              KY+ G  + VDGG  L+
Sbjct: 268 PKAKYITGTCIKVDGGYSLT 287

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 80/197 (40%), Gaps = 10/197 (5%)
Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           DV   E   R  E  +  FGK+D+L+N A          ++   +  V+  D        
Sbjct: 83  DVADFESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDL------- 135
Query: 88  HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 147
            +A+  + K                  +       + Q + ++AKA +   T++LALE  
Sbjct: 136 -DAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALET- 193
Query: 148 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 207
               I VN ++PG +  TA V  +  + + +K    +   + G   ++A    +L SD  
Sbjct: 194 AKRGITVNTVSPGYLA-TAMVEAVPQDVLEAKILPQIPVGRLGRPDEVAALIAFLCSDDA 252
Query: 208 KYVNGNTLIVDGGNWLS 224
            +V G  L ++GG  +S
Sbjct: 253 GFVTGADLAINGGMHMS 269

>pdb|1MXF|A Chain A, Crystal Structure Of Inhibitor Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 82/202 (40%), Gaps = 26/202 (12%)
Query: 38  VVESTINHFGKLDILVNAAAGNF---LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL 94
           +++ +   FG+ D+LVN A+  +   L+P +D   NG      ID+    +    A+  L
Sbjct: 84  IIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDT--NGAADAKPIDAQVAELFGSNAVAPL 141
Query: 95  --------KKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEW 146
                   ++                  A        + ++ + AK A+  +TR+ ALE 
Sbjct: 142 FLIRAFARRQGEGGAWRSRNLSVVNLCDAXTDLPLPGFCVY-TXAKHALGGLTRAAALEL 200
Query: 147 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEK----WDIAMAALYL 202
              + IRVN +APG       +S L P   +    +Y      G+       IA A  +L
Sbjct: 201 APRH-IRVNAVAPG-------LSLLPPAXPQETQEEYRRKVPLGQSEASAAQIADAIAFL 252
Query: 203 ASDAGKYVNGNTLIVDGGNWLS 224
            S    Y+ G TL VDGG  L+
Sbjct: 253 VSKDAGYITGTTLKVDGGLILA 274

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA 185
           I  S+ K A+  +T+++A+E G  + IRVN + P  +    G    A  E   K  +   
Sbjct: 147 ITYSSTKGAMTMLTKAMAMELGP-HKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHP 205
Query: 186 AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             KF E  D+  + L+L SD     +G  ++VD G
Sbjct: 206 LRKFAEVEDVVNSILFLLSDRSASTSGGGILVDAG 240

>pdb|1W0C|A Chain A, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1) By 2,4,6-Triaminoquinazoline; Structure Of The Nadp Ternary Complex. Length = 307

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 51/104 (49%), Gaps = 11/104 (10%)
Query: 124 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP---EEIRSKA 180
           Y I+ + AK A++ +TRS ALE      IRVNG+ PG    +  V  + P   E  RSK 
Sbjct: 210 YTIY-TMAKGALEGLTRSAALELA-PLQIRVNGVGPG---LSVLVDDMPPAVWEGHRSKV 264
Query: 181 TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 224
             Y       E  D+    ++L S   KY+ G  + VDGG  L+
Sbjct: 265 PLYQRDSSAAEVSDVV---IFLCSSKAKYITGTCVKVDGGYSLT 305

>pdb|2QHX|A Chain A, Structure Of Pteridine Reductase From Leishmania Major Complexed With A Ligand Length = 328

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 51/104 (49%), Gaps = 11/104 (10%)
Query: 124 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP---EEIRSKA 180
           Y I+ + AK A++ +TRS ALE      IRVNG+ PG    +  V  + P   E  RSK 
Sbjct: 231 YTIY-TMAKGALEGLTRSAALELA-PLQIRVNGVGPG---LSVLVDDMPPAVWEGHRSKV 285
Query: 181 TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 224
             Y       E  D+    ++L S   KY+ G  + VDGG  L+
Sbjct: 286 PLYQRDSSAAEVSDVV---IFLCSSKAKYITGTCVKVDGGYSLT 326

>pdb|1E92|A Chain A, Pteridine Reductase 1 From Leishmania Major Complexed With Nadp+ And Dihydrobiopterin Length = 288

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 51/104 (49%), Gaps = 11/104 (10%)
Query: 124 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP---EEIRSKA 180
           Y I+ + AK A++ +TRS ALE      IRVNG+ PG    +  V  + P   E  RSK 
Sbjct: 191 YTIY-TMAKGALEGLTRSAALELA-PLQIRVNGVGPG---LSVLVDDMPPAVWEGHRSKV 245
Query: 181 TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 224
             Y       E  D+    ++L S   KY+ G  + VDGG  L+
Sbjct: 246 PLYQRDSSAAEVSDVV---IFLCSSKAKYITGTCVKVDGGYSLT 286

>pdb|1E7W|A Chain A, One Active Site, Two Modes Of Reduction Correlate The Mechanism Of Leishmania Pteridine Reductase With Pterin Metabolism And Antifolate Drug Resistance In Trpanosomes Length = 291

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 51/104 (49%), Gaps = 11/104 (10%)
Query: 124 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP---EEIRSKA 180
           Y I+ + AK A++ +TRS ALE      IRVNG+ PG    +  V  + P   E  RSK 
Sbjct: 194 YTIY-TMAKGALEGLTRSAALELA-PLQIRVNGVGPG---LSVLVDDMPPAVWEGHRSKV 248
Query: 181 TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 224
             Y       E  D+    ++L S   KY+ G  + VDGG  L+
Sbjct: 249 PLYQRDSSAAEVSDVV---IFLCSSKAKYITGTCVKVDGGYSLT 289

>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SDR FROM Xanthobacter Autotrophicus Py2 Length = 272

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 16/162 (9%)
Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVN-AAAGNF 60
           GRR   L+   A    +G  A+ +  DV   +    +  +T+  FG++D+L N A  G  
Sbjct: 59  GRRLDALQETAA---EIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAP 115
Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYT 120
            +P EDL+   ++ V++ +  G F+   EA + + K                  +   Y+
Sbjct: 116 AIPXEDLTFAQWKQVVDTNLTGPFLCTQEAFR-VXKAQEPRGGRIINNGSISATSPRPYS 174
Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI 162
           A +     +A K A+  +T+S +L+       RV+ IA G I
Sbjct: 175 APY-----TATKHAITGLTKSTSLDG------RVHDIACGQI 205

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 52/232 (22%), Positives = 88/232 (37%), Gaps = 26/232 (11%)
Query: 5   KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--GNFLV 62
           +  L  A A++   G+ A     DV   E  +  V+S +  FGK+D L N A   G F  
Sbjct: 41  REALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAF-A 99
Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTAT 122
           P +D   + F  V+ I+  G F      LK + +                          
Sbjct: 100 PVQDYPSDDFARVLTINVTGAF----HVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMA 155
Query: 123 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG------------PIKDTAGVSK 170
            Y      +K A+ ++T + AL+    Y IRVN I+PG             ++   G   
Sbjct: 156 AY----GTSKGAIIALTETAALDL-APYNIRVNAISPGYMGPGFMWERQVELQAKVGSQY 210
Query: 171 LA--PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            +  P+ +  +    +   ++G+  +I     +L  D   ++ G  L + GG
Sbjct: 211 FSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG 262

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPG----PIKDTAGVSKLAPEEIRSKATDYM 184
           SA+KAA+ S    LA E      IRVN ++PG    P K  AG+++    E ++   +  
Sbjct: 153 SASKAALVSFASVLAAEL-LPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNIT 211
Query: 185 AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
              + G   ++A A L+LA +A  +  G  L VDGG
Sbjct: 212 PXKRNGTADEVARAVLFLAFEA-TFTTGAKLAVDGG 246

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPG----PIKDTAGVSKLAPEEIRSKATDYM 184
           SA+KAA+ S    LA E      IRVN ++PG    P K  AG+++    E ++   +  
Sbjct: 152 SASKAALVSFASVLAAEL-LPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNIT 210
Query: 185 AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
              + G   ++A A L+LA +A  +  G  L VDGG
Sbjct: 211 PXKRNGTADEVARAVLFLAFEA-TFTTGAKLAVDGG 245

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 79/211 (37%), Gaps = 22/211 (10%)
Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
           + +A   + ++G  A+    DVR  +     VE  I  FG +DILVN A+   L    D 
Sbjct: 89  IYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDT 148
Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIH 127
                  ++ +++ GT++     + YLKK                    L+    W++ H
Sbjct: 149 PTKRLDLMMNVNTRGTYLASKACIPYLKK--------SKVAHILNISPPLNLNPVWFKQH 200
Query: 128 V--SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA 185
              + AK  +      +A E+  +  I VN + P     TA +  L    I S+      
Sbjct: 201 CAYTIAKYGMSMYVLGMAEEFKGE--IAVNALWPKTAIHTAAMDMLGGPGIESQC----- 253
Query: 186 AYKFGEKWDIAMAALYLASDAGKYVNGNTLI 216
                 K DI   A Y      K   GN +I
Sbjct: 254 -----RKVDIIADAAYSIFQKPKSFTGNFVI 279

>pdb|1MXH|A Chain A, Crystal Structure Of Substrate Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 82/202 (40%), Gaps = 26/202 (12%)
Query: 38  VVESTINHFGKLDILVNAAAGNF---LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL 94
           +++ +   FG+ D+LVN A+  +   L+P +D   NG      ID+    +    A+  L
Sbjct: 84  IIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDT--NGAADAKPIDAQVAELFGSNAVAPL 141
Query: 95  --------KKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEW 146
                   ++                  A        + ++ + AK A+  +TR+ ALE 
Sbjct: 142 FLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVY-TMAKHALGGLTRAAALEL 200
Query: 147 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEK----WDIAMAALYL 202
              + IRVN +APG       +S L P   +    +Y      G+       IA A  +L
Sbjct: 201 APRH-IRVNAVAPG-------LSLLPPAMPQETQEEYRRKVPLGQSEASAAQIADAIAFL 252
Query: 203 ASDAGKYVNGNTLIVDGGNWLS 224
            S    Y+ G TL VDGG  L+
Sbjct: 253 VSKDAGYITGTTLKVDGGLILA 274

>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 125 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM 184
           Q++ SAAKA +   T++LA+E      I VN IAPG I DT  +     E    +A   +
Sbjct: 174 QVNYSAAKAGIIGATKALAIEL-AKRKITVNCIAPGLI-DTGMIEM--EESALKEAMSMI 229
Query: 185 AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
              + G+  ++A  A YL SD   YV    + ++GG
Sbjct: 230 PMKRMGQAEEVAGLASYLMSDIAGYVTRQVISINGG 265

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 76/189 (40%), Gaps = 23/189 (12%)
Query: 44  NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXX 103
           + FG  DILVN A   F+   ED     +  +I ++   +F     A+   KK       
Sbjct: 100 DRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPXKK------- 152
Query: 104 XXXXXXXXXXXATLH-YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI 162
                      A+ H   A+ ++    AAK  +  +T+++ALE   +  + VN I PG +
Sbjct: 153 --KGWGRIINIASAHGLVASPFKSAYVAAKHGIXGLTKTVALEV-AESGVTVNSICPGYV 209
Query: 163 KDTAGVSKLAPEEIRSKATDY-----------MAAYKFGEKWDIAMAALYLASDAGKYVN 211
             T  V K  P++ R++                   KF     +A  ALYLA D    + 
Sbjct: 210 L-TPLVEKQIPDQARTRGITEEQVINEVXLKGQPTKKFITVEQVASLALYLAGDDAAQIT 268
Query: 212 GNTLIVDGG 220
           G  +  DGG
Sbjct: 269 GTHVSXDGG 277

>pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 84/196 (42%), Gaps = 20/196 (10%)
Query: 37  RVVESTINHFGKLDILVNAAAGNFLVPA-----EDLSPNGFRTV-------IEIDSVGTF 84
            ++ S    FG+ D+LVN A+  +  P      ED S NG +TV       I  +++  F
Sbjct: 95  EIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNS-NG-KTVETQVAELIGTNAIAPF 152
Query: 85  IMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
           ++   +    +K                  A +      + ++ +  K A+  +T+S AL
Sbjct: 153 LLTM-SFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLY-NMGKHALVGLTQSAAL 210
Query: 145 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 204
           E    Y IRVNG+APG       + +   ++ R K        +      IA A ++L S
Sbjct: 211 ELAP-YGIRVNGVAPGVSLLPVAMGEEEKDKWRRKVP---LGRREASAEQIADAVIFLVS 266
Query: 205 DAGKYVNGNTLIVDGG 220
            + +Y+ G+ + VDGG
Sbjct: 267 GSAQYITGSIIKVDGG 282

>pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 84/196 (42%), Gaps = 20/196 (10%)
Query: 37  RVVESTINHFGKLDILVNAAAGNFLVPA-----EDLSPNGFRTV-------IEIDSVGTF 84
            ++ S    FG+ D+LVN A+  +  P      ED S NG +TV       I  +++  F
Sbjct: 95  EIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNS-NG-KTVETQVAELIGTNAIAPF 152
Query: 85  IMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
           ++   +    +K                  A +      + ++ +  K A+  +T+S AL
Sbjct: 153 LLTM-SFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLY-NMGKHALVGLTQSAAL 210
Query: 145 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 204
           E    Y IRVNG+APG       + +   ++ R K        +      IA A ++L S
Sbjct: 211 ELAP-YGIRVNGVAPGVSLLPVAMGEEEKDKWRRKVP---LGRREASAEQIADAVIFLVS 266
Query: 205 DAGKYVNGNTLIVDGG 220
            + +Y+ G+ + VDGG
Sbjct: 267 GSAQYITGSIIKVDGG 282

>pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 84/196 (42%), Gaps = 20/196 (10%)
Query: 37  RVVESTINHFGKLDILVNAAAGNFLVPA-----EDLSPNGFRTV-------IEIDSVGTF 84
            ++ S    FG+ D+LVN A+  +  P      ED S NG +TV       I  +++  F
Sbjct: 75  EIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNS-NG-KTVETQVAELIGTNAIAPF 132
Query: 85  IMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
           ++   +    +K                  A +      + ++ +  K A+  +T+S AL
Sbjct: 133 LLTM-SFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLY-NMGKHALVGLTQSAAL 190
Query: 145 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 204
           E    Y IRVNG+APG       + +   ++ R K        +      IA A ++L S
Sbjct: 191 ELAP-YGIRVNGVAPGVSLLPVAMGEEEKDKWRRKVP---LGRREASAEQIADAVIFLVS 246
Query: 205 DAGKYVNGNTLIVDGG 220
            + +Y+ G+ + VDGG
Sbjct: 247 GSAQYITGSIIKVDGG 262

>pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 84/196 (42%), Gaps = 20/196 (10%)
Query: 37  RVVESTINHFGKLDILVNAAAGNFLVPA-----EDLSPNGFRTV-------IEIDSVGTF 84
            ++ S    FG+ D+LVN A+  +  P      ED S NG +TV       I  +++  F
Sbjct: 75  EIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNS-NG-KTVETQVAELIGTNAIAPF 132
Query: 85  IMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
           ++   +    +K                  A +      + ++ +  K A+  +T+S AL
Sbjct: 133 LLTM-SFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLY-NMGKHALVGLTQSAAL 190
Query: 145 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 204
           E    Y IRVNG+APG       + +   ++ R K        +      IA A ++L S
Sbjct: 191 ELAP-YGIRVNGVAPGVSLLPVAMGEEEKDKWRRKVP---LGRREASAEQIADAVIFLVS 246
Query: 205 DAGKYVNGNTLIVDGG 220
            + +Y+ G+ + VDGG
Sbjct: 247 GSAQYITGSIIKVDGG 262

>pdb|2O2Y|A Chain A, The Crystal Structure Of P. Falciparum Enoyl Acyl Carrier Protein Reductase Length = 349

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 48/148 (32%)
Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA--GVSKL-------------- 171
           +S+AKAA++S TR LA   G +Y IR+N I+ GP+K  A   ++KL              
Sbjct: 198 MSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQNKNR 257
Query: 172 -------------APEEIRSKAT------DYMAAYKFGEKW----------DIAMAALYL 202
                          EE ++ A+      DY  A ++ EK+          DI   A +L
Sbjct: 258 NSHDVHNIMNNSGEKEEKKNSASQNYTFIDY--AIEYSEKYAPLRQKLLSTDIGSVASFL 315
Query: 203 ASDAGKYVNGNTLIVDGG-NWLSNPRDL 229
            S   + + G T+ VD G N +  P D+
Sbjct: 316 LSRESRAITGQTIYVDNGLNIMFLPDDI 343

>pdb|3AM3|A Chain A, A372m Mutant Of Enoyl-Acp Reductase From Plasmodium Falciparum (Pfenr) In Complex With Triclosan Length = 329

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 58/138 (42%), Gaps = 47/138 (34%)
Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA--GVSKL-------------- 171
           +S+AKAA++S TR LA   G +Y IR+N I+ GP+K  A   ++KL              
Sbjct: 186 MSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQNKNR 245
Query: 172 -------------APEEIRSKAT------DYMAAYKFGEKW----------DIAMAALYL 202
                          EE +  A+      DYM  Y   EK+          DI   A +L
Sbjct: 246 NRHDVHNIMNNSGEKEEKKISASQNYTFIDYMIEY--SEKYAPLRQKLLSTDIGSVASFL 303
Query: 203 ASDAGKYVNGNTLIVDGG 220
            S   + + G T+ VD G
Sbjct: 304 LSRESRAITGQTIYVDNG 321

>pdb|1VRW|A Chain A, Crystal Structure Analysis Of Plasmodium Falciparum Enoyl- Acyl-Carrier-Protein Reductase With Nadh Length = 336

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 48/148 (32%)
Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA--GVSKL-------------- 171
           +S+AKAA++S TR LA   G +Y IR+N I+ GP+K  A   ++KL              
Sbjct: 185 MSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQNKNR 244
Query: 172 -------------APEEIRSKAT------DYMAAYKFGEKW----------DIAMAALYL 202
                          EE ++ A+      DY  A ++ EK+          DI   A +L
Sbjct: 245 NSHDVHNIMNNSGEKEEKKNSASQNYTFIDY--AIEYSEKYAPLRQKLLSTDIGSVASFL 302
Query: 203 ASDAGKYVNGNTLIVDGG-NWLSNPRDL 229
            S   + + G T+ VD G N +  P D+
Sbjct: 303 LSRESRAITGQTIYVDNGLNIMFLPDDI 330

>pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 84/196 (42%), Gaps = 20/196 (10%)
Query: 37  RVVESTINHFGKLDILVNAAAGNFLVPA-----EDLSPNGFRTV-------IEIDSVGTF 84
            ++ S    FG+ D+LVN A+  +  P      ED S NG +TV       I  +++  F
Sbjct: 95  EIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNS-NG-KTVETQVAELIGTNAIAPF 152
Query: 85  IMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
           ++   +    +K                  A +      + ++ +  K A+  +T+S AL
Sbjct: 153 LLTM-SFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLY-NMGKHALVGLTQSAAL 210
Query: 145 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 204
           E    Y IRVNG+APG       + +   ++ R K        +      IA A ++L S
Sbjct: 211 ELAP-YGIRVNGVAPGVSLLPVAMGEEEKDKWRRKVP---LGRREASAEQIADAVIFLVS 266
Query: 205 DAGKYVNGNTLIVDGG 220
            + +Y+ G+ + VDGG
Sbjct: 267 GSAQYITGSIIKVDGG 282

>pdb|4GKB|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog (Target Efi- 505321) From Burkholderia Multivorans, Unliganded Structure Length = 258

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 83/206 (40%), Gaps = 26/206 (12%)
Query: 23  IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 82
           + L+ D + R+     V  TI  FG+LD LVN A  N  +   D   + F   +E + + 
Sbjct: 62  VELQDDAQCRD----AVAQTIATFGRLDGLVNNAGVNDGI-GLDAGRDAFVASLERNLIH 116
Query: 83  TFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSL 142
            + M H  + +LK                    T  Y A+         K A  ++TR  
Sbjct: 117 YYAMAHYCVPHLKATRGAIVNISSKTAVTGQGNTSGYCAS---------KGAQLALTR-- 165
Query: 143 ALEWGT---DYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKATDYMAAYKFGEKW----D 194
             EW     ++ +RVN + P  +      + +A  E+  +K  +  A    G ++    +
Sbjct: 166 --EWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDE 223
Query: 195 IAMAALYLASDAGKYVNGNTLIVDGG 220
           IA  A++L S    +  G  L VDGG
Sbjct: 224 IADTAVFLLSPRASHTTGEWLFVDGG 249

>pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 84/196 (42%), Gaps = 20/196 (10%)
Query: 37  RVVESTINHFGKLDILVNAAAGNFLVPA-----EDLSPNGFRTV-------IEIDSVGTF 84
            ++ S    FG+ D+LVN A+  +  P      ED S NG +TV       I  +++  F
Sbjct: 95  EIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNS-NG-KTVETQVAELIGTNAIAPF 152
Query: 85  IMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
           ++   +    +K                  A +      + ++ +  K A+  +T+S AL
Sbjct: 153 LLTM-SFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLY-NMGKHALVGLTQSAAL 210
Query: 145 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 204
           E    Y IRVNG+APG       + +   ++ R K        +      IA A ++L S
Sbjct: 211 ELAP-YGIRVNGVAPGVSLLPVAMGEEEKDKWRRKVP---LGRREASAEQIADAVIFLVS 266
Query: 205 DAGKYVNGNTLIVDGG 220
            + +Y+ G+ + VDGG
Sbjct: 267 GSAQYITGSIIKVDGG 282

>pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1) In Ternary Complex With Cofactor And The Antifolate Methotrexate Length = 268

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 84/196 (42%), Gaps = 20/196 (10%)
Query: 37  RVVESTINHFGKLDILVNAAAGNFLVPA-----EDLSPNGFRTV-------IEIDSVGTF 84
            ++ S    FG+ D+LVN A+  +  P      ED S NG +TV       I  +++  F
Sbjct: 75  EIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNS-NG-KTVETQVAELIGTNAIAPF 132
Query: 85  IMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
           ++   +    +K                  A +      + ++ +  K A+  +T+S AL
Sbjct: 133 LLTM-SFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLY-NMGKHALVGLTQSAAL 190
Query: 145 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 204
           E    Y IRVNG+APG       + +   ++ R K        +      IA A ++L S
Sbjct: 191 ELAP-YGIRVNGVAPGVSLLPVAMGEEEKDKWRRKVP---LGRREASAEQIADAVIFLVS 246
Query: 205 DAGKYVNGNTLIVDGG 220
            + +Y+ G+ + VDGG
Sbjct: 247 GSAQYITGSIIKVDGG 262

>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 69/184 (37%), Gaps = 21/184 (11%)
Query: 2   GRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAA 56
           G R  VL  +   L  L    G  A+G+ GDVR  +D  R  E  +  FGK+D L+ NA 
Sbjct: 29  GARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAG 88
Query: 57  AGNFLVPAEDLSPN----GFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXX 112
             ++     DL  +     F  +  ++  G        L  L                  
Sbjct: 89  IWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYP 148
Query: 113 XXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK-DTAGVSKL 171
                 YTAT         K AV  + R +A E      +RVNG+APG +  D  G S L
Sbjct: 149 NGGGPLYTAT---------KHAVVGLVRQMAFELAPH--VRVNGVAPGGMNTDLRGPSSL 197
Query: 172 APEE 175
              E
Sbjct: 198 GLSE 201

>pdb|2OL4|A Chain A, Crystal Structure Of Plasmodium Falciparum Enoyl Acp Reductase With Triclosan Reductase Length = 338

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 60/138 (43%), Gaps = 47/138 (34%)
Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA--GVSKL-------------- 171
           +S+AKAA++S TR LA   G +Y IR+N I+ GP+K  A   ++KL              
Sbjct: 194 MSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQNKNR 253
Query: 172 -------------APEEIRSKAT------DYMAAYKFGEKW----------DIAMAALYL 202
                          EE ++ A+      DY  A ++ EK+          DI   A +L
Sbjct: 254 NSHDVHNIMNNSGEKEEKKNSASQNYTFIDY--AIEYSEKYAPLRQKLLSTDIGSVASFL 311
Query: 203 ASDAGKYVNGNTLIVDGG 220
            S   + + G T+ VD G
Sbjct: 312 LSRESRAITGQTIYVDNG 329

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           DVR       +V   +  FG+LD++V  A         +L+   + TVI ++  GT+   
Sbjct: 85  DVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTW--- 141
Query: 88  HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 147
               + L+                   ++    AT    H SA+K  + ++T +LA+E G
Sbjct: 142 ----RTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTNTLAIELG 197
Query: 148 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK--------FGEKWDIAMAA 199
            +Y IRVN I P  + +T  +   A  EI ++   ++ ++         F    ++A   
Sbjct: 198 -EYGIRVNSIHPYSV-ETPMIEPEAMMEIFARHPSFVHSFPPMPVQPNGFMTADEVADVV 255
Query: 200 LYLASDAGKYVNGNTLIVDGG 220
            +LA D    + G  + VD G
Sbjct: 256 AWLAGDGSGTLTGTQIPVDKG 276

>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 65/175 (37%), Gaps = 8/175 (4%)
Query: 46  FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXX 105
           FG LD+LVN A  +   P  D  P  F   I ++     ++     K +           
Sbjct: 96  FGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIIT 155
Query: 106 XXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT 165
                       HY           +KA +   T+ LA E G  + IR N + P  +   
Sbjct: 156 VASAAALAPLPDHYA-------YCTSKAGLVMATKVLARELGP-HGIRANSVCPTVVLTE 207
Query: 166 AGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            G      E   +     +   +F    +++ A ++LASDA   +NG  + VDGG
Sbjct: 208 MGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLASDAASMINGVDIPVDGG 262

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 90/229 (39%), Gaps = 27/229 (11%)
Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
           R ++ L S        G+ A  L  D+   +     +       G LDILVN A      
Sbjct: 44  RERSTLES------KFGVKAYYLNADLSDAQATRDFIAKAAEALGGLDILVNNAGIQHTA 97
Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLH-YTA 121
           P E+   + +  +I ++    F     AL  ++K                  A+ H   A
Sbjct: 98  PIEEFPVDKWNAIIALNLSAVFHGTAAALPIMQK---------QGWGRIINIASAHGLVA 148
Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG----PI--KDTAGVSKLAPEE 175
           +  +    AAK  V  +T+  ALE      I  N I PG    P+  K    +S+    +
Sbjct: 149 SVNKSAYVAAKHGVVGLTKVTALE-NAGKGITCNAICPGWVRTPLVEKQIEAISQQKGID 207
Query: 176 IRSKATDYMA----AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           I + A + +A    + +F     +  AA++L+S A   + G TL +DGG
Sbjct: 208 IEAAARELLAEKQPSLQFVTPEQLGGAAVFLSSAAADQMTGTTLSLDGG 256

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
           M R +  L++  A L      A+ L GDVR+  D  R V +    FG+L  LVN A    
Sbjct: 35  MARDEKRLQALAAELEG----ALPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGV 90
Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKK 96
           + P  +L+   +R V++ +  G F+    A+  L +
Sbjct: 91  MKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLR 126

>pdb|1UH5|A Chain A, Crystal Structure Of Enoyl-Acp Reductase With Triclosan At 2.2angstroms Length = 329

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS 169
           +S+AKAA++S TR LA   G +Y IR+N I+ GP+K  A  +
Sbjct: 186 MSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATA 227

>pdb|2FOI|A Chain A, Synthesis, Biological Activity, And X-Ray Crystal Structural Analysis Of Diaryl Ether Inhibitors Of Malarial Enoyl Acp Reductase. Length = 269

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS 169
           +S+AKAA++S TR LA   G +Y IR+N I+ GP+K  A  +
Sbjct: 185 MSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATA 226

>pdb|1NHG|A Chain A, Crystal Structure Analysis Of Plasmodium Falciparum Enoyl- Acyl-Carrier-Protein Reductase With Triclosan Length = 229

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS 169
           +S+AKAA++S TR LA   G +Y IR+N I+ GP+K  A  +
Sbjct: 185 MSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATA 226

>pdb|2PD3|A Chain A, Crystal Structure Of The Helicobacter Pylori Enoyl-Acyl Carrier Protein Reductase In Complex With Hydroxydiphenyl Ether Compounds, Triclosan And Diclosan Length = 275

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 86/220 (39%), Gaps = 57/220 (25%)
Query: 26  EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL-------SPNGFRTVIEI 78
           E DV K E    +  S     G LD +V++ A     P E L       S + F T +EI
Sbjct: 62  ELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVA---FAPKEALEGSLLETSKSAFNTAMEI 118
Query: 79  DSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYT-ATWYQIHVSA---AKAA 134
            SV + I     LK L                     TL Y  +T Y  H +    AKAA
Sbjct: 119 -SVYSLIELTNTLKPL-------------LNNGASVLTLSYLGSTKYMAHYNVMGLAKAA 164
Query: 135 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW- 193
           ++S  R LA++ G  + IRVN ++ GPI              R+ A+  +A ++   KW 
Sbjct: 165 LESAVRYLAVDLGKHH-IRVNALSAGPI--------------RTLASSGIADFRMILKWN 209
Query: 194 -------------DIAMAALYLASDAGKYVNGNTLIVDGG 220
                        ++  A +YL S     V+G    VD G
Sbjct: 210 EINAPLRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAG 249

>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 82/213 (38%), Gaps = 13/213 (6%)
Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAE--DLSP 69
           +A L  LG   I L  D+         V++ +  FG++D LVN A    +V  +  DL P
Sbjct: 71  IAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKP 130
Query: 70  NGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVS 129
             F T++ ++  GT       LK                       T     +  ++   
Sbjct: 131 ENFDTIVGVNLRGTVFFTQAVLKAXLASDARASRSIINITSVSAVXT-----SPERLDYC 185
Query: 130 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD--TAGVSKLAPEEIRSKATDYMAAY 187
            +KA + + ++ LAL    +  I V  + PG I+   TA VS      I S     +   
Sbjct: 186 XSKAGLAAFSQGLALRL-AETGIAVFEVRPGIIRSDXTAAVSGKYDGLIESG---LVPXR 241
Query: 188 KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           ++GE  DI      LA     +  G+ +  DGG
Sbjct: 242 RWGEPEDIGNIVAGLAGGQFGFATGSVIQADGG 274

>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 10/92 (10%)
Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK 188
           ++AK  + ++T +LA+  G D  + VN IAPG I  T        +E   +    + A K
Sbjct: 147 ASAKGGIVALTHALAMSLGPD--VLVNCIAPGWINVTE------QQEFTQEDCAAIPAGK 198
Query: 189 FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            G   DI+   L+L      ++ G T+IVDGG
Sbjct: 199 VGTPKDISNMVLFLCQQ--DFITGETIIVDGG 228

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 55/136 (40%), Gaps = 10/136 (7%)
Query: 25  LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 84
           LE DV  R+     V ST+   G LDILVN A    L P ED     +  +I+ + +G  
Sbjct: 61  LELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLM 120
Query: 85  IMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
            M   AL +L +                        A  YQ    A K  V++ + +L  
Sbjct: 121 YMTRAALPHLLRSKGTVVQMSSIAGRVNVR-----NAAVYQ----ATKFGVNAFSETLRQ 171
Query: 145 EWGTDYAIRVNGIAPG 160
           E  T+  +RV  I PG
Sbjct: 172 EV-TERGVRVVVIEPG 186

>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/204 (23%), Positives = 82/204 (40%), Gaps = 17/204 (8%)
Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
           DV       +V +  +    +LD LVNAA    +   + LS   ++    ++  G F + 
Sbjct: 54  DVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLF 113
Query: 88  HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 147
            + +   ++                      +T         A+KAA+ S+  S+ LE  
Sbjct: 114 QQTMNQFRRQRGGAIVTVASDAA--------HTPRIGMSAYGASKAALKSLALSVGLELA 165
Query: 148 TDYAIRVNGIAPGP----IKDTAGVSKLAPEE-IRSKATDYMAAYKFGE---KWDIAMAA 199
               +R N ++PG     ++ T  VS  A E+ IR     +      G+     +IA   
Sbjct: 166 GS-GVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTI 224
Query: 200 LYLASDAGKYVNGNTLIVDGGNWL 223
           L+LASD   ++    ++VDGG+ L
Sbjct: 225 LFLASDLASHITLQDIVVDGGSTL 248

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/227 (22%), Positives = 87/227 (38%), Gaps = 16/227 (7%)
Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
           R +  LR+ +  L   G+ A G   DVR   +   +V + +  +G +D+LVN A      
Sbjct: 58  RGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGG 117
Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTAT 122
              +L+   +  V+E +  G F +  + LK                        +H  A 
Sbjct: 118 ATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVH--AA 175
Query: 123 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS---------KLAP 173
            Y    SA+K  V   T++L LE      I VN + PG ++     S         +++ 
Sbjct: 176 PY----SASKHGVVGFTKALGLEL-ARTGITVNAVCPGFVETPMAASVREHYSDIWEVST 230
Query: 174 EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           EE   + T  +   ++ +  ++A    YL       V    L V GG
Sbjct: 231 EEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG 277

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/227 (22%), Positives = 87/227 (38%), Gaps = 16/227 (7%)
Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
           R +  LR+ +  L   G+ A G   DVR   +   +V + +  +G +D+LVN A      
Sbjct: 58  RGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGG 117
Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTAT 122
              +L+   +  V+E +  G F +  + LK                        +H  A 
Sbjct: 118 ATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVH--AA 175
Query: 123 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS---------KLAP 173
            Y    SA+K  V   T++L LE      I VN + PG ++     S         +++ 
Sbjct: 176 PY----SASKHGVVGFTKALGLEL-ARTGITVNAVCPGFVETPMAASVREHFSDIWEVST 230
Query: 174 EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           EE   + T  +   ++ +  ++A    YL       V    L V GG
Sbjct: 231 EEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG 277

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/227 (22%), Positives = 87/227 (38%), Gaps = 16/227 (7%)
Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
           R +  LR+ +  L   G+ A G   DVR   +   +V + +  +G +D+LVN A      
Sbjct: 54  RGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGG 113
Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTAT 122
              +L+   +  V+E +  G F +  + LK                        +H  A 
Sbjct: 114 ATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVH--AA 171
Query: 123 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS---------KLAP 173
            Y    SA+K  V   T++L LE      I VN + PG ++     S         +++ 
Sbjct: 172 PY----SASKHGVVGFTKALGLEL-ARTGITVNAVCPGFVETPMAASVREHYSDIWEVST 226
Query: 174 EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           EE   + T  +   ++ +  ++A    YL       V    L V GG
Sbjct: 227 EEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG 273

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/227 (22%), Positives = 87/227 (38%), Gaps = 16/227 (7%)
Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
           R +  LR+ +  L   G+ A G   DVR   +   +V + +  +G +D+LVN A      
Sbjct: 38  RGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGG 97
Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTAT 122
              +L+   +  V+E +  G F +  + LK                        +H  A 
Sbjct: 98  ATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVH--AA 155
Query: 123 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS---------KLAP 173
            Y    SA+K  V   T++L LE      I VN + PG ++     S         +++ 
Sbjct: 156 PY----SASKHGVVGFTKALGLEL-ARTGITVNAVCPGFVETPMAASVREHYSDIWEVST 210
Query: 174 EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           EE   + T  +   ++ +  ++A    YL       V    L V GG
Sbjct: 211 EEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG 257

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/227 (22%), Positives = 87/227 (38%), Gaps = 16/227 (7%)
Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
           R +  LR+ +  L   G+ A G   DVR   +   +V + +  +G +D+LVN A      
Sbjct: 58  RGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGG 117
Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTAT 122
              +L+   +  V+E +  G F +  + LK                        +H  A 
Sbjct: 118 ATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVH--AA 175
Query: 123 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS---------KLAP 173
            Y    SA+K  V   T++L LE      I VN + PG ++     S         +++ 
Sbjct: 176 PY----SASKHGVVGFTKALGLEL-ARTGITVNAVCPGWVETPMAASVREHYSDIWEVST 230
Query: 174 EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           EE   + T  +   ++ +  ++A    YL       V    L V GG
Sbjct: 231 EEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG 277

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 52/227 (22%), Positives = 87/227 (38%), Gaps = 16/227 (7%)
Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
           R +  LR+ +  L   G+ A G   DVR   +   +V + +  +G +D+LVN A      
Sbjct: 58  RGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGG 117
Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTAT 122
              +L+   +  V+E +  G F +  + LK                        +H  A 
Sbjct: 118 ATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGLVH--AA 175
Query: 123 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS---------KLAP 173
            Y    SA+K  V   T++L LE      I VN + PG ++     S         +++ 
Sbjct: 176 PY----SASKHGVVGFTKALGLEL-ARTGITVNAVCPGFVETPMAASVREHYSDIWEVST 230
Query: 174 EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           EE   + T  +   ++ +  ++A    YL       V    L V GG
Sbjct: 231 EEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG 277

>pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase Family Protein From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 244

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK 188
           + +K A+   T+SLAL+    Y IRVN + PG + DT     L  +   +    +  A K
Sbjct: 141 TLSKGAIAQXTKSLALDLAK-YQIRVNTVCPGTV-DTDLYRNLIQKYANNVGISFDEAQK 198
Query: 189 FGEK----------WDIAMAALYLASDAGKYVNGNTLIVDGG 220
             EK           +IA   ++L SD  K+  G  + +DGG
Sbjct: 199 QEEKEFPLNRIAQPQEIAELVIFLLSDKSKFXTGGLIPIDGG 240

>pdb|3KSU|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From Oenococcus Oeni Psu-1 Length = 262

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 21/199 (10%)
Query: 26  EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 85
           + D+   E+  ++ +     FGK+DI +N        P  + S   F  +  I++   + 
Sbjct: 69  QSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYF 128
Query: 86  MCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALE 145
              +A K++                     +L    T +    +  KA V+  TR+ + E
Sbjct: 129 FIKQAAKHMNP----------NGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKE 178
Query: 146 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW----DIAMAALY 201
                 I VN IAPGP+ DT   S    +E + ++T +  +   G +     DIA    +
Sbjct: 179 L-MKQQISVNAIAPGPM-DT---SFFYGQETK-ESTAFHKSQAMGNQLTKIEDIAPIIKF 232
Query: 202 LASDAGKYVNGNTLIVDGG 220
           L +D G ++NG T+  +GG
Sbjct: 233 LTTD-GWWINGQTIFANGG 250

>pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From Xanthomonas Campestris Length = 274

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/151 (21%), Positives = 62/151 (41%), Gaps = 11/151 (7%)
Query: 23  IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 82
           + L+ D+R+ +     V +T++ FG +DILVN A+  +L    D     F    ++++ G
Sbjct: 65  LALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPXKRFDLXQQVNARG 124
Query: 83  TFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHV--SAAKAAVDSITR 140
           +F+     L +L +                          W+  H   + AK     +T 
Sbjct: 125 SFVCAQACLPHLLQAPNPHILTLAPPPS--------LNPAWWGAHTGYTLAKXGXSLVTL 176
Query: 141 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKL 171
            LA E+G    + +N + P  +  T  ++ L
Sbjct: 177 GLAAEFGPQ-GVAINALWPRTVIATDAINXL 206

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 52/227 (22%), Positives = 87/227 (38%), Gaps = 16/227 (7%)
Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
           R +  LR+ +  L   G+ A G   DVR   +   +V + +  +G +D+LVN A      
Sbjct: 54  RGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGG 113
Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTAT 122
              +L+   +  V+E +  G F +  + LK                        +H  A 
Sbjct: 114 ATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVH--AA 171
Query: 123 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS---------KLAP 173
            Y    SA+K  V   T++L LE      I VN + PG ++     S         +++ 
Sbjct: 172 PY----SASKHGVVGFTKALGLEL-ARTGITVNAVCPGFVETPMAASVREHYSDIWEVST 226
Query: 174 EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           EE   + T  +   ++ +  ++A    YL       V    L V GG
Sbjct: 227 EEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG 273

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 52/227 (22%), Positives = 87/227 (38%), Gaps = 16/227 (7%)
Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
           R +  LR+ +  L   G+ A G   DVR   +   +V + +  +G +D+LVN A      
Sbjct: 58  RGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGG 117
Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTAT 122
              +L+   +  V+E +  G F +  + LK                        +H  A 
Sbjct: 118 ATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVH--AA 175
Query: 123 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS---------KLAP 173
            Y    SA+K  V   T++L LE      I VN + PG ++     S         +++ 
Sbjct: 176 PY----SASKHGVVGFTKALGLEL-ARTGITVNAVCPGFVETPMAASVREHYSDIWEVST 230
Query: 174 EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           EE   + T  +   ++ +  ++A    YL       V    L V GG
Sbjct: 231 EEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG 277

>pdb|4ALL|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp And Triclosan (P212121) Length = 277

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 79/200 (39%), Gaps = 21/200 (10%)
Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL-------SPNGFRTVIEIDS 80
           DV+  E+ +   E      G +D + ++ A       EDL       S  GF    +I S
Sbjct: 87  DVQSDEEVINGFEQIGKDVGNIDGVYHSIA---FANMEDLRGRFSETSREGFLLAQDISS 143
Query: 81  VGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITR 140
               I+ HEA K + +                      +    Y + +  AKA++++  +
Sbjct: 144 YSLTIVAHEAKKLMPEGGSIVATTYLGG---------EFAVQNYNV-MGVAKASLEANVK 193
Query: 141 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 200
            LAL+ G D  IRVN I+ GPI+  +         I  +  +     +  ++ ++   A 
Sbjct: 194 YLALDLGPD-NIRVNAISAGPIRTLSAKGVGGFNTILKEIEERAPLKRNVDQVEVGKTAA 252
Query: 201 YLASDAGKYVNGNTLIVDGG 220
           YL SD    V G  + VD G
Sbjct: 253 YLLSDLSSGVTGENIHVDSG 272

>pdb|4ALI|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp And Triclosan (P1) Length = 282

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 79/200 (39%), Gaps = 21/200 (10%)
Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL-------SPNGFRTVIEIDS 80
           DV+  E+ +   E      G +D + ++ A       EDL       S  GF    +I S
Sbjct: 92  DVQSDEEVINGFEQIGKDVGNIDGVYHSIA---FANMEDLRGRFSETSREGFLLAQDISS 148
Query: 81  VGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITR 140
               I+ HEA K + +                      +    Y + +  AKA++++  +
Sbjct: 149 YSLTIVAHEAKKLMPEGGSIVATTYLGG---------EFAVQNYNV-MGVAKASLEANVK 198
Query: 141 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 200
            LAL+ G D  IRVN I+ GPI+  +         I  +  +     +  ++ ++   A 
Sbjct: 199 YLALDLGPD-NIRVNAISAGPIRTLSAKGVGGFNTILKEIEERAPLKRNVDQVEVGKTAA 257
Query: 201 YLASDAGKYVNGNTLIVDGG 220
           YL SD    V G  + VD G
Sbjct: 258 YLLSDLSSGVTGENIHVDSG 277

>pdb|3GNS|A Chain A, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl Carrier Protein Reductase (Fabi) In Apo Form (One Molecule In Au) Length = 260

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 79/200 (39%), Gaps = 21/200 (10%)
Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL-------SPNGFRTVIEIDS 80
           DV+  E+ +   E      G +D + ++ A       EDL       S  GF    +I S
Sbjct: 70  DVQSDEEVINGFEQIGKDVGNIDGVYHSIA---FANMEDLRGRFSETSREGFLLAQDISS 126
Query: 81  VGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITR 140
               I+ HEA K + +                      +    Y + +  AKA++++  +
Sbjct: 127 YSLTIVAHEAKKLMPEGGSIVATTYLGG---------EFAVQNYNV-MGVAKASLEANVK 176
Query: 141 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 200
            LAL+ G D  IRVN I+ GPI+  +         I  +  +     +  ++ ++   A 
Sbjct: 177 YLALDLGPD-NIRVNAISAGPIRTLSAKGVGGFNTILKEIEERAPLKRNVDQVEVGKTAA 235
Query: 201 YLASDAGKYVNGNTLIVDGG 220
           YL SD    V G  + VD G
Sbjct: 236 YLLSDLSSGVTGENIHVDSG 255

>pdb|4FS3|A Chain A, Crystal Structure Of Staphylococcus Aureus Enoyl-Acp Reductase In Complex With Nadp And Afn-1252 Length = 256

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 84/204 (41%), Gaps = 29/204 (14%)
Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL-------SPNGFRTVIEIDS 80
           DV+  E+ +   E      G +D + ++ A       EDL       S  GF    +I S
Sbjct: 66  DVQSDEEVINGFEQIGKDVGNIDGVYHSIA---FANMEDLRGRFSETSREGFLLAQDISS 122
Query: 81  VGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITR 140
               I+ HEA K + +                      +    Y + +  AKA++++  +
Sbjct: 123 YSLTIVAHEAKKLMPEGGSIVATTYLGG---------EFAVQNYNV-MGVAKASLEANVK 172
Query: 141 SLALEWGTDYAIRVNGIAPGPIKDTA--GVSKLAP--EEIRSKATDYMAAYKFGEKWDIA 196
            LAL+ G D  IRVN I+ GPI+  +  GV       +EI+ +A       +  ++ ++ 
Sbjct: 173 YLALDLGPD-NIRVNAISAGPIRTLSAKGVGGFNTILKEIKERA----PLKRNVDQVEVG 227
Query: 197 MAALYLASDAGKYVNGNTLIVDGG 220
             A YL SD    V G  + VD G
Sbjct: 228 KTAAYLLSDLSSGVTGENIHVDSG 251

>pdb|3GNT|A Chain A, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl Carrier Protein Reductase (Fabi) In Apo Form (Two Molecules In Au) Length = 256

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 79/200 (39%), Gaps = 21/200 (10%)
Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL-------SPNGFRTVIEIDS 80
           DV+  E+ +   E      G +D + ++ A       EDL       S  GF    +I S
Sbjct: 66  DVQSDEEVINGFEQIGKDVGNIDGVYHSIA---FANMEDLRGRFSETSREGFLLAQDISS 122
Query: 81  VGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITR 140
               I+ HEA K + +                      +    Y + +  AKA++++  +
Sbjct: 123 YSLTIVAHEAKKLMPEGGSIVATTYLGG---------EFAVQNYNV-MGVAKASLEANVK 172
Query: 141 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 200
            LAL+ G D  IRVN I+ GPI+  +         I  +  +     +  ++ ++   A 
Sbjct: 173 YLALDLGPD-NIRVNAISAGPIRTLSAKGVGGFNTILKEIEERAPLKRNVDQVEVGKTAA 231
Query: 201 YLASDAGKYVNGNTLIVDGG 220
           YL SD    V G  + VD G
Sbjct: 232 YLLSDLSSGVTGENIHVDSG 251

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	257
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	6e-88
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	6e-86
3imf_A	257	Short chain dehydrogenase; structural genomics, in	8e-86
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	1e-66
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	2e-53
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	2e-51
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	5e-51
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	8e-51
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	3e-50
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	6e-50
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	7e-50
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	9e-50
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	9e-50
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	1e-49
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	3e-49
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	3e-49
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	3e-49
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	4e-49
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	6e-49
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	8e-49
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	1e-48
1xq1_A	266	Putative tropinone reducatse; structural genomics,	1e-48
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	2e-48
1xkq_A	280	Short-chain reductase family member (5D234); parra	3e-48
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	4e-48
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	9e-48
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	1e-47
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	1e-47
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	3e-47
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	3e-47
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	4e-47
1spx_A	278	Short-chain reductase family member (5L265); paral	5e-47
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	7e-47
4dqx_A	277	Probable oxidoreductase protein; structural genomi	1e-46
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	1e-46
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	1e-46
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	1e-46
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	2e-46
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	2e-46
3cxt_A	291	Dehydrogenase with different specificities; rossma	4e-46
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	4e-46
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-46
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	4e-46
1xhl_A	297	Short-chain dehydrogenase/reductase family member	4e-46
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	5e-46
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	6e-46
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	1e-45
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	1e-45
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	1e-45
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	1e-45
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	2e-45
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	2e-45
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	3e-45
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	6e-45
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	9e-45
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	1e-44
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	1e-44
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	1e-44
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	2e-44
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	2e-44
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	2e-44
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	3e-44
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	3e-44
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	7e-44
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	7e-44
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	7e-44
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	2e-43
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	2e-43
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-43
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	2e-43
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	2e-43
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	4e-43
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	5e-43
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	7e-43
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	9e-43
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	1e-42
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	1e-42
4e4y_A	244	Short chain dehydrogenase family protein; structur	1e-42
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	2e-42
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	2e-42
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	5e-42
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	6e-42
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	9e-42
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	9e-42
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	1e-41
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	1e-41
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	7e-41
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	2e-40
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	3e-40
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	5e-40
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	9e-40
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	9e-40
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	2e-39
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	2e-39
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	3e-39
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	1e-38
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	1e-38
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	1e-38
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	1e-38
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	2e-38
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	3e-38
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	5e-38
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	5e-38
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	5e-38
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	8e-38
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	3e-37
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	4e-37
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	7e-37
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	8e-37
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	8e-37
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	9e-37
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	2e-36
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	2e-36
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	3e-36
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	3e-36
3rih_A	293	Short chain dehydrogenase or reductase; structural	5e-36
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	6e-36
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	9e-36
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	9e-36
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	2e-35
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	2e-35
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	8e-35
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	1e-33
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-33
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	2e-33
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	2e-33
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	2e-33
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	2e-33
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	4e-33
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	6e-33
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	6e-33
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	4e-32
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	5e-32
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	7e-32
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	7e-32
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	8e-32
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	1e-31
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	1e-31
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	1e-31
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	3e-31
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	4e-31
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	4e-31
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	2e-30
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	2e-30
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	3e-30
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	3e-30
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	4e-30
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	5e-30
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	8e-30
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	6e-29
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	8e-29
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	6e-28
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	8e-28
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	1e-27
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	1e-26
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	4e-26
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	9e-26
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	5e-25
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	1e-24
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	3e-24
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	3e-24
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	7e-24
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	8e-24
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	2e-22
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	8e-22
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	1e-20
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	1e-20
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	6e-20
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	7e-20
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	6e-20
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	6e-20
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	7e-20
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	6e-19
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	8e-19
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-18
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	2e-18
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	3e-18
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	9e-18
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	1e-17
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	2e-17
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	2e-17
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	2e-17
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	2e-17
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	3e-17
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	3e-17
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	4e-17
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	4e-17
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	5e-17
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	6e-17
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	6e-17
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	7e-17
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	7e-17
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	1e-16
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	1e-16
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	2e-16
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	2e-15
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	3e-13
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	2e-12
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	1e-11
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	3e-11
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	7e-06

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  262 bits (671), Expect = 6e-88
 Identities = 74/256 (28%), Positives = 124/256 (48%), Gaps = 17/256 (6%)

Query: 1   MGRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN 59
             R+  VL++    + S  G     ++ DVR  +     V   I   G  +I++N AAGN
Sbjct: 56  ASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGN 115

Query: 60  FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 119
           F+ P E LSPN ++T+ +I   GT  +  E  K L K  +       G   ++I+     
Sbjct: 116 FISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQK-------GAAFLSITTIYAE 168

Query: 120 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRS 178
           T + + +  ++AKA V+++++SLA EWG  Y +R N I PGPIK     S+L P      
Sbjct: 169 TGSGFVVPSASAKAGVEAMSKSLAAEWG-KYGMRFNVIQPGPIKTKGAFSRLDPTGTFEK 227

Query: 179 KATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL------SNPRDLPKE 232
           +    +   + G   ++A  A +L SD   ++NG  +  DGG  +      ++ R + KE
Sbjct: 228 EMIGRIPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTKE 287

Query: 233 AVNQLSRAVERKSRDS 248
             + +   + RK++ S
Sbjct: 288 QWDTIEELI-RKTKGS 302

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  256 bits (656), Expect = 6e-86
 Identities = 89/228 (39%), Positives = 123/228 (53%), Gaps = 11/228 (4%)

Query: 1   MGRRKTVLRSAVAAL-HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN 59
             R    + +A   L  + G   + L  DVR     +  V+  +  FG++DIL+N AAGN
Sbjct: 57  ASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGN 116

Query: 60  FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 119
           FL PA  LS N F+TV++ID+ GTF +     +   +          GG+I+NI+ATL  
Sbjct: 117 FLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDH--------GGVIVNITATLGN 168

Query: 120 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRS 178
                Q+H  +AKAAVD++TR LA+EWG    IRVN +APGPI  T G+ +L   +   S
Sbjct: 169 RGQALQVHAGSAKAAVDAMTRHLAVEWGP-QNIRVNSLAPGPISGTEGLRRLGGPQASLS 227

Query: 179 KATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNP 226
                    + G K +IA + LYLAS    YV G  L+ DGG WL+ P
Sbjct: 228 TKVTASPLQRLGNKTEIAHSVLYLASPLASYVTGAVLVADGGAWLTFP 275

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  255 bits (653), Expect = 8e-86
 Identities = 90/227 (39%), Positives = 122/227 (53%), Gaps = 8/227 (3%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
            GR K  L  A   +       + ++ DVR  +D  +++E     FG++DIL+N AAGNF
Sbjct: 36  TGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNF 95

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
           + PAEDLS NG+ +VI I   GTF       KY  + G         G IIN+ AT  + 
Sbjct: 96  ICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGI-------KGNIINMVATYAWD 148

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSK 179
           A    IH +AAKA V ++T++LA+EWG  Y IRVN IAPGPI+ T G  KL   EE+  +
Sbjct: 149 AGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKR 208

Query: 180 ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNP 226
               +   + G   +IA  A YL SD   Y+NG  + +DGG  L   
Sbjct: 209 TIQSVPLGRLGTPEEIAGLAYYLCSDEAAYINGTCMTMDGGQHLHQY 255

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  208 bits (531), Expect = 1e-66
 Identities = 69/232 (29%), Positives = 107/232 (46%), Gaps = 17/232 (7%)

Query: 2   GRRKTVLRSAVAAL-----HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA 56
            R+   L+SA   L      +     I ++ ++R  E+   +V+ST++ FGK++ LVN  
Sbjct: 49  SRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNG 108

Query: 57  AGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 116
            G FL PAE +S  G+  V+E +  GTF MC        K          GG I+NI   
Sbjct: 109 GGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH--------GGSIVNIIVP 160

Query: 117 LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP--E 174
                    +H  AA+A V ++T+SLALEW     IR+N +APG I     V       +
Sbjct: 161 -TKAGFPLAVHSGAARAGVYNLTKSLALEWAC-SGIRINCVAPGVIYSQTAVENYGSWGQ 218

Query: 175 EIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNP 226
                +   + A + G   +++    +L S A  ++ G ++ VDGG  L   
Sbjct: 219 SFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSLYTH 270

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  173 bits (440), Expect = 2e-53
 Identities = 48/233 (20%), Positives = 97/233 (41%), Gaps = 20/233 (8%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNF 60
            R    L      +   G  A+ +  D+        +V+ T+  +G++D+++ NA     
Sbjct: 42  ARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPS 101

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
           + P  + +    R  IE+   G   +       L++           G ++N+++ +   
Sbjct: 102 MKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEES---------KGAVVNVNSMVVRH 152

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK---------DTAGVSKL 171
           +         AK+A+ +++++LA E G +  IRVN + PG I            AG    
Sbjct: 153 SQAKYGAYKMAKSALLAMSQTLATELG-EKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGT 211

Query: 172 APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 224
           + E+I + A       +   + ++A A L++ASD    + G  L V+ G + +
Sbjct: 212 SVEDIYNAAAAGSDLKRLPTEDEVASAILFMASDLASGITGQALDVNCGEYKA 264

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  167 bits (425), Expect = 2e-51
 Identities = 62/229 (27%), Positives = 99/229 (43%), Gaps = 16/229 (6%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNF 60
            R +  L   +    S G        D+  R +   ++ +  NHF GKL+ILVN A    
Sbjct: 40  SRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVI 99

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
              A+D +   +  ++ I+    + +   A  +LK            G ++ IS+     
Sbjct: 100 YKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE--------RGNVVFISSVSGAL 151

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
           A  Y+    A K A+D +TR LA EW  D  IRVNG+ PG I  T+ V     +  + + 
Sbjct: 152 AVPYEAVYGATKGAMDQLTRCLAFEWAKD-NIRVNGVGPGVIA-TSLVEMTIQDPEQKEN 209

Query: 181 TDYMAAY----KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSN 225
            + +       + GE  ++A    +L   A  YV G  + VDGG  ++N
Sbjct: 210 LNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGG-LMAN 257

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  166 bits (424), Expect = 5e-51
 Identities = 64/225 (28%), Positives = 107/225 (47%), Gaps = 21/225 (9%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
           GRRK VL +A+A +   G  A+G++ D     +  R+ E      G++D+L   A G  +
Sbjct: 60  GRRKDVLDAAIAEI---GGGAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSM 116

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
           +P  +++   +    + +  G      +AL  L +G            ++   +T   T 
Sbjct: 117 LPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSS----------VVLTGSTAGSTG 166

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSK 179
           T      +A+KAA+ S  R+  L+   D  IR+N ++PGP  +T G+ +LA      +  
Sbjct: 167 TPAFSVYAASKAALRSFARNWILDLK-DRGIRINTLSPGPT-ETTGLVELAGKDPVQQQG 224

Query: 180 ATDYMAAY----KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             + +AA     + G   ++A AAL+LASD   +V G  L VDGG
Sbjct: 225 LLNALAAQVPMGRVGRAEEVAAAALFLASDDSSFVTGAELFVDGG 269

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  166 bits (422), Expect = 8e-51
 Identities = 53/221 (23%), Positives = 88/221 (39%), Gaps = 11/221 (4%)

Query: 2   GRRKTVLRSAVAAL-HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
           GR  + L +A  AL    G     +  D+ + +    +       FG LD+LVN A  + 
Sbjct: 51  GRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISH 110

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
             P  D  P  F   I ++     ++     K +   G        GG II +++     
Sbjct: 111 PQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGE-------GGAIITVASAAALA 163

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSK 179
                     +KA +   T+ LA E G  + IR N + P  +  T    ++   E   + 
Sbjct: 164 PLPDHYAYCTSKAGLVMATKVLARELG-PHGIRANSVCPTVV-LTEMGQRVWGDEAKSAP 221

Query: 180 ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
               +   +F    +++ A ++LASDA   +NG  + VDGG
Sbjct: 222 MIARIPLGRFAVPHEVSDAVVWLASDAASMINGVDIPVDGG 262

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  165 bits (419), Expect = 3e-50
 Identities = 54/229 (23%), Positives = 97/229 (42%), Gaps = 15/229 (6%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNF 60
            R +  L   +      G+   G   D+  R +  +++++  + F GKL+ILVN A    
Sbjct: 52  SRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVI 111

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
              A+D +   +  ++  +    + +   A   LK            G +I +S+   ++
Sbjct: 112 HKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ--------NGNVIFLSSIAGFS 163

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK----DTAGVSKLAPEEI 176
           A       SA+K A++ +T+SLA EW     IRVN +APG I     +TA       +E 
Sbjct: 164 ALPSVSLYSASKGAINQMTKSLACEWA-KDNIRVNSVAPGVILTPLVETAIKKNPHQKEE 222

Query: 177 RSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSN 225
                      + G+  +++    +L   A  Y+ G  +  DGG + +N
Sbjct: 223 IDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYITGQIIWADGG-FTAN 270

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  163 bits (415), Expect = 6e-50
 Identities = 59/224 (26%), Positives = 94/224 (41%), Gaps = 11/224 (4%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
             R T+L  +V  L   G  A G+  DV                   +DIL+N A   + 
Sbjct: 40  DIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYR 99

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            P  +L    ++ VI+ +    F++   A K +            GG IINI +     A
Sbjct: 100 KPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNS-------GGKIINIGSLTSQAA 152

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA- 180
                  +AAK  +  +T S+A EW   + I+ N I PG I  T   + L  ++      
Sbjct: 153 RPTVAPYTAAKGGIKMLTCSMAAEWA-QFNIQTNAIGPGYI-LTDMNTALIEDKQFDSWV 210

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 224
                + ++G   ++   A++L+S A  Y+NG  + VDGG WL+
Sbjct: 211 KSSTPSQRWGRPEELIGTAIFLSSKASDYINGQIIYVDGG-WLA 253

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  163 bits (415), Expect = 7e-50
 Identities = 50/223 (22%), Positives = 87/223 (39%), Gaps = 19/223 (8%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
           GR ++ +          G     L  D+    +   +  +     G +D+L   A  + L
Sbjct: 39  GRNESNIARIREEF---GPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSEL 95

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            P + +S   +     +++ G F         +++GG           I+  S+      
Sbjct: 96  EPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGS----------IVFTSSVADEGG 145

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK----DTAGVSKLAPEEIR 177
                  SA+KAA+ S    LA E      IRVN ++PG I       AG+++    E +
Sbjct: 146 HPGMSVYSASKAALVSFASVLAAELL-PRGIRVNSVSPGFIDTPTKGVAGITEAERAEFK 204

Query: 178 SKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           +   +     + G   ++A A L+LA +A  +  G  L VDGG
Sbjct: 205 TLGDNITPMKRNGTADEVARAVLFLAFEAT-FTTGAKLAVDGG 246

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  163 bits (415), Expect = 9e-50
 Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 12/220 (5%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFL 61
           R++  +   VA L   G+   G    V K ED  R+V   +N  G +DILV NAA   F 
Sbjct: 46  RKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFF 105

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
               D +   +  ++ ++   T +M    +  ++K G        GG ++ +S+   Y  
Sbjct: 106 GNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRG--------GGSVLIVSSVGAYHP 157

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKA 180
                  + +K A+  +T++LA+E      IRVN +APG IK T     L   +  +   
Sbjct: 158 FPNLGPYNVSKTALLGLTKNLAVELA-PRNIRVNCLAPGLIK-TNFSQVLWMDKARKEYM 215

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            + +   + G   D A    +L S+   Y+ G T++V GG
Sbjct: 216 KESLRIRRLGNPEDCAGIVSFLCSEDASYITGETVVVGGG 255

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  163 bits (414), Expect = 9e-50
 Identities = 62/212 (29%), Positives = 95/212 (44%), Gaps = 11/212 (5%)

Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS 68
              V  +  LG  A     D+   ++   + +  I+  GK+DILVN A G       D+ 
Sbjct: 49  NHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGG-PKPFDMP 107

Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 128
              FR   E++    F +       ++K G        GG+I+ I++             
Sbjct: 108 MADFRRAYELNVFSFFHLSQLVAPEMEKNG--------GGVILTITSMAAENKNINMTSY 159

Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK 188
           +++KAA   + R++A + G    IRVNGIAPG I  T  +  +   EI  K   +    +
Sbjct: 160 ASSKAAASHLVRNMAFDLGE-KNIRVNGIAPGAI-LTDALKSVITPEIEQKMLQHTPIRR 217

Query: 189 FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            G+  DIA AAL+L S A  +V+G  L V GG
Sbjct: 218 LGQPQDIANAALFLCSPAASWVSGQILTVSGG 249

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  163 bits (415), Expect = 1e-49
 Identities = 46/215 (21%), Positives = 89/215 (41%), Gaps = 21/215 (9%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
           + SA AA+++ G   + L+ D+R+ +     V +T++ FG +DILVN A+  +L    D 
Sbjct: 50  IHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDT 109

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
               F  + ++++ G+F+     L +L +             I+ ++        W+  H
Sbjct: 110 PMKRFDLMQQVNARGSFVCAQACLPHLLQAP--------NPHILTLAPPPSLNPAWWGAH 161

Query: 128 V--SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA 185
              + AK  +  +T  LA E+G    + +N + P  +  T  ++ L   +          
Sbjct: 162 TGYTLAKMGMSLVTLGLAAEFG-PQGVAINALWPRTVIATDAINMLPGVDAA-------- 212

Query: 186 AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                    +A AA  + +      +G  LI D  
Sbjct: 213 --ACRRPEIMADAAHAVLTREAAGFHGQFLIDDEV 245

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  162 bits (413), Expect = 3e-49
 Identities = 62/233 (26%), Positives = 99/233 (42%), Gaps = 15/233 (6%)

Query: 2   GRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG 58
           GR    L  AV  L +LG           D+   ++  R V++     G+L  +V+ A G
Sbjct: 42  GRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGG 101

Query: 59  N-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 117
           +  + P   +    +R  ++++  GT  +   A + + +GG        GG  + IS+  
Sbjct: 102 SENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGG--------GGSFVGISSIA 153

Query: 118 HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEI 176
                 +       K+AVD + +  A E G    +RVN I PG I  T  V+ +    E+
Sbjct: 154 ASNTHRWFGAYGVTKSAVDHLMQLAADELG-ASWVRVNSIRPGLI-RTDLVAAITESAEL 211

Query: 177 RSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDL 229
            S         + GE  D+A  A++L SDA  +V G  + VDGG  L    D 
Sbjct: 212 SSDYAMCTPLPRQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLRRGPDF 264

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  161 bits (411), Expect = 3e-49
 Identities = 63/223 (28%), Positives = 97/223 (43%), Gaps = 17/223 (7%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
           A  A   +G  A  ++ DV +++     + +T+ H G LDILVN AA   L P  +++  
Sbjct: 45  ARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRE 104

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            +  +  I+  GT      A + +   GR       GG IIN+++              A
Sbjct: 105 SYEKLFAINVAGTLFTLQAAARQMIAQGR-------GGKIINMASQAGRRGEALVAIYCA 157

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK---------DTAGVSKLAPEEIRSKAT 181
            KAAV S+T+S  L+    + I VN IAPG +            A        E +    
Sbjct: 158 TKAAVISLTQSAGLDLI-KHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVG 216

Query: 182 DYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 224
           + +   + G   D+   A++LAS    Y+   T  VDGGNW+S
Sbjct: 217 EAVPFGRMGTAEDLTGMAIFLASAESDYIVSQTYNVDGGNWMS 259

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  161 bits (410), Expect = 3e-49
 Identities = 54/211 (25%), Positives = 87/211 (41%), Gaps = 9/211 (4%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
             A            + D    +   ++ ++T   FG +  LVN A        E+ +  
Sbjct: 45  KAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTA 104

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            +R ++ ++  G F      ++ +K  G        G  IIN+S+   +         +A
Sbjct: 105 EWRKLLAVNLDGVFFGTRLGIQRMKNKGL-------GASIINMSSIEGFVGDPSLGAYNA 157

Query: 131 AKAAVDSITRSLALEWGT-DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKF 189
           +K AV  +++S AL+    DY +RVN + PG I  T  V  L   E              
Sbjct: 158 SKGAVRIMSKSAALDCALKDYDVRVNTVHPGYI-KTPLVDDLPGAEEAMSQRTKTPMGHI 216

Query: 190 GEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           GE  DIA   +YLAS+  K+  G+  +VDGG
Sbjct: 217 GEPNDIAYICVYLASNESKFATGSEFVVDGG 247

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  161 bits (410), Expect = 4e-49
 Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 15/212 (7%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
              +  LG+  + ++ +V +      + +     FG+LD+ VN AA   L P  +L    
Sbjct: 46  AEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETH 105

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS--ATLHYTATWYQIHVS 129
           +   + I++        EA K ++K G        GG I++IS   ++ Y        V 
Sbjct: 106 WDWTMNINAKALLFCAQEAAKLMEKNG--------GGHIVSISSLGSIRYLEN--YTTVG 155

Query: 130 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYK 188
            +KAA++++TR LA+E      I VN ++ G I DT  +      E++   A     A +
Sbjct: 156 VSKAALEALTRYLAVELS-PKQIIVNAVSGGAI-DTDALKHFPNREDLLEDARQNTPAGR 213

Query: 189 FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             E  D+     +L S     + G T+IVDGG
Sbjct: 214 MVEIKDMVDTVEFLVSSKADMIRGQTIIVDGG 245

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  161 bits (410), Expect = 6e-49
 Identities = 51/221 (23%), Positives = 94/221 (42%), Gaps = 13/221 (5%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R    L+     +  +G  A+ +  DV + +    +++      G +DI V  A    +
Sbjct: 63  ARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSV 122

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
               D+    F+ + + +  G F+    A + +   G        GG II  ++   +  
Sbjct: 123 QAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGL-------GGTIITTASMSGHII 175

Query: 122 TWYQIHVS--AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 179
              Q       +KAAV  +T+++A+E    + IRVN ++PG I  T  V  L   +  + 
Sbjct: 176 NIPQQVSHYCTSKAAVVHLTKAMAVELA-PHQIRVNSVSPGYI-RTELVEPL--ADYHAL 231

Query: 180 ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
               +   + G   ++    LYLAS A  Y+ G+ +++DGG
Sbjct: 232 WEPKIPLGRMGRPEELTGLYLYLASAASSYMTGSDIVIDGG 272

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  160 bits (408), Expect = 8e-49
 Identities = 56/223 (25%), Positives = 86/223 (38%), Gaps = 14/223 (6%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
              + +   AV  L   G     +  DV   E     V S     G++DILV  A     
Sbjct: 44  DLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICIS 103

Query: 62  -VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
            V AED++   +   ++I+  G F  C    + + +           G+I+ I +     
Sbjct: 104 EVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQK--------QGVIVAIGSMSGLI 155

Query: 121 ATWY--QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIR 177
                 Q   +A+KA V    RSLA EW   + IR N +AP  I +T          E+ 
Sbjct: 156 VNRPQQQAAYNASKAGVHQYIRSLAAEWA-PHGIRANAVAPTYI-ETTLTRFGMEKPELY 213

Query: 178 SKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                     + G+  ++A    +LASDA   + G  + VD G
Sbjct: 214 DAWIAGTPMGRVGQPDEVASVVQFLASDAASLMTGAIVNVDAG 256

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  160 bits (408), Expect = 1e-48
 Identities = 74/227 (32%), Positives = 108/227 (47%), Gaps = 14/227 (6%)

Query: 2   GRRKTVLRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
            R       A   L    G+  +    DV   E+  +++E+    FGKLD +VNAA  N 
Sbjct: 52  SRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINR 111

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
             PAE+   + FR VIE++  GT+ +C EA   L++             IINI +     
Sbjct: 112 RHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPS--------IINIGSLTVEE 163

Query: 121 ATWYQIHV-SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 179
            T   I   +A+K  V S+T++LA EWG  Y IRVN IAPG  + T     +  +  +  
Sbjct: 164 VTMPNISAYAASKGGVASLTKALAKEWGR-YGIRVNVIAPGWYR-TKMTEAVFSDPEKLD 221

Query: 180 A-TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSN 225
                +   + G   D+   A++LAS+  KYV G  + VDGG W +N
Sbjct: 222 YMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGG-WTAN 267

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  160 bits (407), Expect = 1e-48
 Identities = 56/220 (25%), Positives = 90/220 (40%), Gaps = 11/220 (5%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG-KLDILVNAAAGNF 60
            R +  L   ++     G    G   D   R +  +++++  + FG KLDIL+N      
Sbjct: 45  ARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIR 104

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
             P  D +   F   I  +    + +   A   LK  G         G II +S+     
Sbjct: 105 SKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG--------CGNIIFMSSIAGVV 156

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
           +       SA K A++ + R+LA EW +D  IR N +AP  I  T     +  +E +   
Sbjct: 157 SASVGSIYSATKGALNQLARNLACEWASD-GIRANAVAPAVIA-TPLAEAVYDDEFKKVV 214

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                  +FGE  +++    +L   A  Y+ G T+ VDGG
Sbjct: 215 ISRKPLGRFGEPEEVSSLVAFLCMPAASYITGQTICVDGG 254

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  159 bits (405), Expect = 2e-48
 Identities = 52/216 (24%), Positives = 88/216 (40%), Gaps = 15/216 (6%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVN-AAAGNFLVPAEDLSPN 70
           VA +  LG  A+ ++ D+    +    + +  + FG++  LV+ A          ++   
Sbjct: 50  VAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEA 109

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIHVS 129
            +  V++++    F+    AL  + KGG           I+  S+           +  +
Sbjct: 110 FWHQVLDVNLTSLFLTAKTALPKMAKGGA----------IVTFSSQAGRDGGGPGALAYA 159

Query: 130 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKF 189
            +K AV + TR LA E G    IRVN + PG I  T         E+R +     +  + 
Sbjct: 160 TSKGAVMTFTRGLAKEVGPK--IRVNAVCPGMI-STTFHDTFTKPEVRERVAGATSLKRE 216

Query: 190 GEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSN 225
           G   D+A    +LASD   YV G    ++GG   S 
Sbjct: 217 GSSEDVAGLVAFLASDDAAYVTGACYDINGGVLFSE 252

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  160 bits (406), Expect = 3e-48
 Identities = 58/241 (24%), Positives = 105/241 (43%), Gaps = 28/241 (11%)

Query: 2   GRRKTVLRSAVAALHSLGIP---AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA-- 56
           GR    L      +   G+       +  DV   +   +++ ST+  FGK+D+LVN A  
Sbjct: 37  GRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGA 96

Query: 57  --AGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 114
                F     D   + +   ++++      M  +   +L             G I+N+S
Sbjct: 97  AIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS---------KGEIVNVS 147

Query: 115 ATLH-YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA- 172
           + +    A    ++ + AKAA+D  TRS A++    + IRVN ++PG + +T   + +  
Sbjct: 148 SIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLA-KFGIRVNSVSPGMV-ETGFTNAMGM 205

Query: 173 PEEIRSKATDYMAAYK-------FGEKWDIAMAALYLASD-AGKYVNGNTLIVDGGNWLS 224
           P++   K  ++MA++K        G+   IA   L+LA      Y+ G +++ DGG  L 
Sbjct: 206 PDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSLV 265

Query: 225 N 225
            
Sbjct: 266 M 266

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  158 bits (403), Expect = 4e-48
 Identities = 49/209 (23%), Positives = 84/209 (40%), Gaps = 13/209 (6%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
              L   G      + D+   E+  ++ +     FGK+DI +N        P  + S   
Sbjct: 55  KDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAE 114

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 131
           F  +  I++   +    +A K++   G           II I+ +L    T +    +  
Sbjct: 115 FDAMDTINNKVAYFFIKQAAKHMNPNGH----------IITIATSLLAAYTGFYSTYAGN 164

Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 191
           KA V+  TR+ + E      I VN IAPGP+ DT+       +E  +         +  +
Sbjct: 165 KAPVEHYTRAASKELM-KQQISVNAIAPGPM-DTSFFYGQETKESTAFHKSQAMGNQLTK 222

Query: 192 KWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             DIA    +L +D   ++NG T+  +GG
Sbjct: 223 IEDIAPIIKFLTTDGW-WINGQTIFANGG 250

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  158 bits (402), Expect = 9e-48
 Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 12/212 (5%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA--AGNFLVPAEDLS 68
              A  S+G  A+    D+        +++ TI+ FG+LDI+ N A  +    +    ++
Sbjct: 48  LAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMT 107

Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 128
            + +     +++ GT +MC  A+  L   G        GG I+NIS+   + A       
Sbjct: 108 VDVWDDTFTVNARGTMLMCKYAIPRLISAG--------GGAIVNISSATAHAAYDMSTAY 159

Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK 188
           +  KAA++++TR +A ++G    +R N IAPG +  T  +    P+ I      +  A +
Sbjct: 160 ACTKAAIETLTRYVATQYGRH-GVRCNAIAPGLV-RTPRLEVGLPQPIVDIFATHHLAGR 217

Query: 189 FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            GE  +IA    +LASD   ++ G  +  D G
Sbjct: 218 IGEPHEIAELVCFLASDRAAFITGQVIAADSG 249

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  158 bits (401), Expect = 1e-47
 Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 10/214 (4%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSP 69
           A      +G  A+ +  D+ K  D    VE+ ++ FGK+DILV NA  G+    AE + P
Sbjct: 46  AERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEP 105

Query: 70  NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 129
             F  ++ ++  G ++M  + + + K+ G          +I+N+++T            +
Sbjct: 106 EEFDRIVGVNVRGVYLMTSKLIPHFKENGAK----GQECVILNVASTGAGRPRPNLAWYN 161

Query: 130 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---PEEIRSKATDYMAA 186
           A K  V S+T++LA+E      IRV  + P    +T  ++       EEIR K  D +  
Sbjct: 162 ATKGWVVSVTKALAIELA-PAKIRVVALNPVAG-ETPLLTTFMGEDSEEIRKKFRDSIPM 219

Query: 187 YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            +  +  D+A AA +L S     + G  L VDGG
Sbjct: 220 GRLLKPDDLAEAAAFLCSPQASMITGVALDVDGG 253

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  157 bits (400), Expect = 1e-47
 Identities = 57/215 (26%), Positives = 92/215 (42%), Gaps = 17/215 (7%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
            +AA   LG  ++ +  DV    D   V+ +     G L++LVN A        E     
Sbjct: 45  QLAA--ELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLE 102

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            F  +++I++   FI C + +  +K+          GG IIN+++   +         SA
Sbjct: 103 DFSRLLKINTESVFIGCQQGIAAMKET---------GGSIINMASVSSWLPIEQYAGYSA 153

Query: 131 AKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-- 187
           +KAAV ++TR+ AL      YAIRVN I P  I  T  +    P+ +  +   +      
Sbjct: 154 SKAAVSALTRAAALSCRKQGYAIRVNSIHPDGI-YTPMMQASLPKGVSKEMVLHDPKLNR 212

Query: 188 --KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             +      IA   L+LASD    ++G+ L  D  
Sbjct: 213 AGRAYMPERIAQLVLFLASDESSVMSGSELHADNS 247

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  156 bits (398), Expect = 3e-47
 Identities = 67/211 (31%), Positives = 105/211 (49%), Gaps = 10/211 (4%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
            +  +  +G  AI ++GDV    D + +V+S I  FGKLD+++N A     V + ++S +
Sbjct: 48  VLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLS 107

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            +  VI+ +  G F+   EA+KY  +           G +IN+S+          +H +A
Sbjct: 108 DWNKVIDTNLTGAFLGSREAIKYFVENDI-------KGTVINMSSVHEKIPWPLFVHYAA 160

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKF 189
           +K  +  +T +LALE+     IRVN I PG I +T   ++  A  E R+     +     
Sbjct: 161 SKGGMKLMTETLALEYAP-KGIRVNNIGPGAI-NTPINAEKFADPEQRADVESMIPMGYI 218

Query: 190 GEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           GE  +IA  A +LAS    YV G TL  DGG
Sbjct: 219 GEPEEIAAVAAWLASSEASYVTGITLFADGG 249

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  156 bits (396), Expect = 3e-47
 Identities = 53/223 (23%), Positives = 86/223 (38%), Gaps = 19/223 (8%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R +  L S V            +  D+   E      E  +   G +D+LVN AA   L
Sbjct: 38  SRTQADLDSLVRECPG----IEPVCVDLGDWEA----TERALGSVGPVDLLVNNAAVALL 89

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            P  +++   F    E++      +     + L   G         G I+N+S+     A
Sbjct: 90  QPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGV-------PGAIVNVSSQCSQRA 142

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKA 180
                   + K A+D +T+ +ALE G  + IRVN + P  +  T+      +        
Sbjct: 143 VTNHSVYCSTKGALDMLTKVMALELG-PHKIRVNAVNPTVV-MTSMGQATWSDPHKAKTM 200

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 223
            + +   KF E   +  A L+L SD      G+TL V+GG + 
Sbjct: 201 LNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGG-FW 242

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  156 bits (398), Expect = 4e-47
 Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 13/221 (5%)

Query: 4   RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP 63
           R   ++     +   G  A  +  D+   E A  V E  +    ++D+LVN A      P
Sbjct: 63  RTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAE-ELAATRRVDVLVNNAGIIARAP 121

Query: 64  AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 123
           AE++S   +R V+ ++    +++       +   G G+        I+ I++ L +    
Sbjct: 122 AEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGR--------IVTIASMLSFQGGR 173

Query: 124 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA-TD 182
                +A+K AV  +TR+LA EW     + VN +APG +  TA  + L  ++ R+   T 
Sbjct: 174 NVAAYAASKHAVVGLTRALASEWAG-RGVGVNALAPGYV-VTANTAALRADDERAAEITA 231

Query: 183 YMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 223
            + A ++    D+   A++LASDA  YV+G  L VDGG WL
Sbjct: 232 RIPAGRWATPEDMVGPAVFLASDAASYVHGQVLAVDGG-WL 271

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  156 bits (397), Expect = 5e-47
 Identities = 65/236 (27%), Positives = 98/236 (41%), Gaps = 28/236 (11%)

Query: 2   GRRKTVLRSAVAALHSLGIP---AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA-- 56
           GR    L      + + G+       +  DV        ++ +T+  FGKLDILVN A  
Sbjct: 37  GRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGA 96

Query: 57  --AGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 114
               +        S   +   + ++      +  +A+ +L             G I+NIS
Sbjct: 97  AIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST---------KGEIVNIS 147

Query: 115 ATLH-YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA- 172
           +      AT    + S AKAA+D  TR+ A++    + IRVN I+PG +  T   S +  
Sbjct: 148 SIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLI-QHGIRVNSISPGLV-ATGFGSAMGM 205

Query: 173 PEEIRSKATDYMAAYK-------FGEKWDIAMAALYLASD-AGKYVNGNTLIVDGG 220
           PEE   K    MA  K        G+  DIA    +LA      Y+ G+ L+VDGG
Sbjct: 206 PEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGG 261

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  155 bits (395), Expect = 7e-47
 Identities = 64/222 (28%), Positives = 88/222 (39%), Gaps = 16/222 (7%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R    L  A   L      A  +  DV   E               + ILVN+A    L
Sbjct: 42  DREAAALDRAAQEL--GAAVAARIVADVTDAEAMTAAAA-EAEAVAPVSILVNSAGIARL 98

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
             A +     +R V+ ++  G F       + +   G G         I+N+ +      
Sbjct: 99  HDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGA--------IVNLGSMSGTIV 150

Query: 122 TWYQIHVS--AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRS 178
              Q   S  A+K AV  +TR+LA EW     +RVN +APG +  T    K+    E+  
Sbjct: 151 NRPQFASSYMASKGAVHQLTRALAAEWA-GRGVRVNALAPGYV-ATEMTLKMRERPELFE 208

Query: 179 KATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
              D     + GE  +IA AAL+LAS A  YV G  L VDGG
Sbjct: 209 TWLDMTPMGRCGEPSEIAAAALFLASPAASYVTGAILAVDGG 250

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  155 bits (395), Expect = 1e-46
 Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 15/215 (6%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
           AV   + +G  A G+  DV   +DA  +VE T   +G++D+LVN A          +   
Sbjct: 64  AVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEE 123

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            +  ++ ++  G F+     +  +++ G        GG IIN ++    +A   +    A
Sbjct: 124 TWDRIMSVNVKGIFLCSKYVIPVMRRNG--------GGSIINTTSYTATSAIADRTAYVA 175

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMA 185
           +K A+ S+TR++A++   +  IRVN +APG I D+   +K+      P ++RS       
Sbjct: 176 SKGAISSLTRAMAMDHAKE-GIRVNAVAPGTI-DSPYFTKIFAEAKDPAKLRSDFNARAV 233

Query: 186 AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             + G   +IA A L+LASD  ++  G+ L VDGG
Sbjct: 234 MDRMGTAEEIAEAMLFLASDRSRFATGSILTVDGG 268

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  155 bits (393), Expect = 1e-46
 Identities = 43/226 (19%), Positives = 83/226 (36%), Gaps = 17/226 (7%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
               +  + +    A+ +  DV  + +    ++      G  D+LVN A    + P  ++
Sbjct: 41  AAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEV 100

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
           +    + +  ++    F     A +   + G         G IIN ++            
Sbjct: 101 TEEDLKQIYSVNVFSVFFGIQAASRKFDELGV-------KGKIINAASIAAIQGFPILSA 153

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK---------DTAGVSKLAPEEIRS 178
            S  K AV  +T++ A E        VN  APG +          + + ++     E   
Sbjct: 154 YSTTKFAVRGLTQAAAQELAP-KGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFK 212

Query: 179 KATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 224
           + +  +A  +     D+A    +LAS+   YV G  ++VDGG   +
Sbjct: 213 EYSSSIALGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDGGMLYN 258

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  155 bits (395), Expect = 1e-46
 Identities = 63/224 (28%), Positives = 92/224 (41%), Gaps = 15/224 (6%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNF 60
            R    L      +   G  A  L GDV        +VE  +  FG LD    NA A   
Sbjct: 39  ARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGA 98

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
           +     LS  G+R  ++ +    F+     +  +   G        GG +   S+ + +T
Sbjct: 99  MGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALG--------GGSLTFTSSFVGHT 150

Query: 121 ATWYQIHV-SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---APEEI 176
           A +  +   +A+KA +  + ++LA+E G    IRVN + PG   DT         A  E 
Sbjct: 151 AGFAGVAPYAASKAGLIGLVQALAVELGAR-GIRVNALLPGGT-DTPANFANLPGAAPET 208

Query: 177 RSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           R       A  +     +IA AALYLASD   +V G  L+ DGG
Sbjct: 209 RGFVEGLHALKRIARPEEIAEAALYLASDGASFVTGAALLADGG 252

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  155 bits (395), Expect = 1e-46
 Identities = 50/222 (22%), Positives = 91/222 (40%), Gaps = 16/222 (7%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA--AGNF 60
                   A     + G+ +   + ++   +     +      FG +D+ V  A      
Sbjct: 66  NSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQ 125

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS--ATLH 118
               +  + + +  +I +D  G +   H   K  KK G+G         +I  S  +   
Sbjct: 126 GPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGS--------LIITSSISGKI 177

Query: 119 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS 178
                 Q   + AKAA   + +SLA+EW      RVN I+PG I DT  ++  A +++++
Sbjct: 178 VNIPQLQAPYNTAKAACTHLAKSLAIEWAPF--ARVNTISPGYI-DTD-ITDFASKDMKA 233

Query: 179 KATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           K        + G   ++    LYLAS+A  +  G+ +++DGG
Sbjct: 234 KWWQLTPLGREGLTQELVGGYLYLASNASTFTTGSDVVIDGG 275

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  154 bits (392), Expect = 2e-46
 Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 10/214 (4%)

Query: 8   LRSAVAALHSLGIP-AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAED 66
           L      L  LG+     +  DV   E    ++  T+   G+LD+LVN A      P  D
Sbjct: 60  LGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVD 119

Query: 67  LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 126
           ++   +  V+ +           AL+Y +    G       G+I+N ++ L + A   Q 
Sbjct: 120 MTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHG-------GVIVNNASVLGWRAQHSQS 172

Query: 127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA 186
           H +AAKA V ++TR  A+E   ++ +R+N ++P        + K +  E+  +     A 
Sbjct: 173 HYAAAKAGVMALTRCSAIEAV-EFGVRINAVSPSIA-RHKFLEKTSSSELLDRLASDEAF 230

Query: 187 YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            +  E W++A    +LASD   Y+ G  + V   
Sbjct: 231 GRAAEPWEVAATIAFLASDYSSYMTGEVVSVSSQ 264

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  155 bits (393), Expect = 2e-46
 Identities = 48/229 (20%), Positives = 80/229 (34%), Gaps = 19/229 (8%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
           + +A   +   G  A+ + GD+R  +     V  T+  FG +DI VN A+   L   E++
Sbjct: 53  IYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEV 112

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
               F  +  I   GT+ +    + ++K              I+ +S  +     W +  
Sbjct: 113 PLKRFDLMNGIQVRGTYAVSQSCIPHMKGRD--------NPHILTLSPPIRLEPKWLRPT 164

Query: 128 V-SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA 186
               AK  +      +A E   D  I  N + P     TA V  L   +         A 
Sbjct: 165 PYMMAKYGMTLCALGIAEELR-DAGIASNTLWPRTTVATAAVQNLLGGDE--------AM 215

Query: 187 YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVN 235
            +  +    A AA  + +       GNTL+ +     S   DL      
Sbjct: 216 ARSRKPEVYADAAYVVLNKPS-SYTGNTLLCEDVLLESGVTDLSVYDCV 263

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  154 bits (392), Expect = 4e-46
 Identities = 66/230 (28%), Positives = 94/230 (40%), Gaps = 21/230 (9%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNF 60
           GR +T +      +   G  AI LE DV         V   +  FG LDI+V NA     
Sbjct: 59  GRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGV 118

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS--ATLH 118
             P +DL P  +   I ++  GTF+  H  + YLK+ G        GG I+ +S      
Sbjct: 119 WAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRG--------GGAIVVVSSINGTR 170

Query: 119 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS 178
              T      +A KAA  +I + LALE G  + IRVN + PG I +T             
Sbjct: 171 TFTTPGATAYTATKAAQVAIVQQLALELG-KHHIRVNAVCPGAI-ETNISDNTKLRHEEE 228

Query: 179 KATDYMAAYK--------FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            A                 G   D+A    +L S+  ++V G+ + +DGG
Sbjct: 229 TAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSERARHVTGSPVWIDGG 278

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  153 bits (390), Expect = 4e-46
 Identities = 61/209 (29%), Positives = 90/209 (43%), Gaps = 12/209 (5%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
              + + G  A+  + DV       R+  +    FG +D+LVN A    L    +     
Sbjct: 69  AGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAV 128

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 131
           F  VI ++  GTF    EA + L+ GGR          IIN+S +            +AA
Sbjct: 129 FDRVIAVNLKGTFNTLREAAQRLRVGGR----------IINMSTSQVGLLHPSYGIYAAA 178

Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 191
           KA V+++T  L+ E      I VN +APGP   T    +   +E+R +        + G 
Sbjct: 179 KAGVEAMTHVLSKELRG-RDITVNAVAPGPT-ATDLFLEGKSDEVRDRFAKLAPLERLGT 236

Query: 192 KWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             DIA A  +LA   G +VNG  L  +GG
Sbjct: 237 PQDIAGAVAFLAGPDGAWVNGQVLRANGG 265

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  154 bits (391), Expect = 4e-46
 Identities = 52/222 (23%), Positives = 93/222 (41%), Gaps = 11/222 (4%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R           L + G     +  D+     A R+ ++      +LDILVN A  ++ 
Sbjct: 60  ARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWG 118

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
              E    +G+  V++++    F    + L  L++    +    +   +INI +    +A
Sbjct: 119 AALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAE----NPARVINIGSVAGISA 174

Query: 122 TWYQIHV-SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI--KDTAGVSKLAPEEIRS 178
              Q +    +KAA+  ++R LA E      I VN IAPG    + T  +      +   
Sbjct: 175 MGEQAYAYGPSKAALHQLSRMLAKELV-GEHINVNVIAPGRFPSRMTRHI--ANDPQALE 231

Query: 179 KATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             +  +   ++G   ++A  A+ LA  AG Y+ GN + +DGG
Sbjct: 232 ADSASIPMGRWGRPEEMAALAISLAGTAGAYMTGNVIPIDGG 273

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  155 bits (393), Expect = 4e-46
 Identities = 57/239 (23%), Positives = 103/239 (43%), Gaps = 26/239 (10%)

Query: 2   GRRKTVLRSAVAALHSLGIPA---IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG 58
           GR +  L      +   G+PA     +  DV +      ++ +T+  FGK+DILVN A  
Sbjct: 57  GRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGA 116

Query: 59  NF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI-SA 115
           N        D     ++   +++      M  +  ++L K         + G I+N+ S 
Sbjct: 117 NLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIK---------TKGEIVNVSSI 167

Query: 116 TLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PE 174
                A     + + AKAA+D  TR  A++    + +RVN ++PG +  T  +  +  PE
Sbjct: 168 VAGPQAHSGYPYYACAKAALDQYTRCTAIDLI-QHGVRVNSVSPGAV-ATGFMGAMGLPE 225

Query: 175 EIRSKATDYMAAYK-------FGEKWDIAMAALYLAS-DAGKYVNGNTLIVDGGNWLSN 225
               K   ++ + K        G+  +IA   ++LA  +   Y+ G +++ DGG+ L  
Sbjct: 226 TASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVM 284

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  153 bits (389), Expect = 5e-46
 Identities = 68/222 (30%), Positives = 106/222 (47%), Gaps = 19/222 (8%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN--- 59
            +     +  AA+   G  AIGLE +V   +    V+++ ++ FGK+ +LVN A G    
Sbjct: 44  LKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPK 103

Query: 60  -FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 118
            F +P  D     F    +++    F +   A  +++K G        GG I+NIS+   
Sbjct: 104 PFDMPMSD-----FEWAFKLNLFSLFRLSQLAAPHMQKAG--------GGAILNISSMAG 150

Query: 119 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS 178
                      ++KAAV+ +TR++A + G    IRVN IAPG I  T  ++ +   EI  
Sbjct: 151 ENTNVRMASYGSSKAAVNHLTRNIAFDVGP-MGIRVNAIAPGAI-KTDALATVLTPEIER 208

Query: 179 KATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
               +    + GE  DIA AAL+L S A  +++G  L V GG
Sbjct: 209 AMLKHTPLGRLGEAQDIANAALFLCSPAAAWISGQVLTVSGG 250

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  153 bits (388), Expect = 6e-46
 Identities = 51/225 (22%), Positives = 93/225 (41%), Gaps = 19/225 (8%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R  + L S              +  D+   +      E  +   G +D+LVN AA   +
Sbjct: 38  TRTNSDLVSLAKECPG----IEPVCVDLGDWDA----TEKALGGIGPVDLLVNNAALVIM 89

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            P  +++   F     ++    F +     + +   G         G I+N+S+ + +  
Sbjct: 90  QPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGV-------PGSIVNVSSMVAHVT 142

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKA 180
               I  S+ K A+  +T+++A+E G  + IRVN + P  +  T    K+ A  E   K 
Sbjct: 143 FPNLITYSSTKGAMTMLTKAMAMELG-PHKIRVNSVNPTVV-LTDMGKKVSADPEFARKL 200

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSN 225
            +     KF E  D+  + L+L SD     +G  ++VD G +L++
Sbjct: 201 KERHPLRKFAEVEDVVNSILFLLSDRSASTSGGGILVDAG-YLAS 244

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  152 bits (387), Expect = 1e-45
 Identities = 53/226 (23%), Positives = 90/226 (39%), Gaps = 17/226 (7%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
            ++  + ++  G  A+ ++ DV  R+     VE      G  D++VN A      P E +
Sbjct: 39  AKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESI 98

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
           +P     V  I+  G       A++  KK G        GG IIN  +   +        
Sbjct: 99  TPEIVDKVYNINVKGVIWGIQAAVEAFKKEGH-------GGKIINACSQAGHVGNPELAV 151

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK---------DTAGVSKLAPEEIRS 178
            S++K AV  +T++ A +      I VNG  PG +K           +  +        +
Sbjct: 152 YSSSKFAVRGLTQTAARDLAP-LGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTA 210

Query: 179 KATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 224
           +    +   +  E  D+A    YLAS    Y+ G +L++DGG   +
Sbjct: 211 EFAKRITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGMVFN 256

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  153 bits (388), Expect = 1e-45
 Identities = 64/205 (31%), Positives = 102/205 (49%), Gaps = 18/205 (8%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVN-AAAGNFLVPAEDLSPNGFRTVIEIDS 80
           A+ +  DV + +D   +V  TI  FG+LD +VN A         E+ S  GFR ++E++ 
Sbjct: 56  AVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNL 115

Query: 81  VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITR 140
           +GT+ +   AL YL+K           G +INIS+ +        +   A K AV ++T+
Sbjct: 116 LGTYTLTKLALPYLRKS---------QGNVINISSLVGAIGQAQAVPYVATKGAVTAMTK 166

Query: 141 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMAAYKFGEKWDI 195
           +LAL+    Y +RVN I+PG I  T    +LA     P     +        + G+  ++
Sbjct: 167 ALALDES-PYGVRVNCISPGNI-WTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEV 224

Query: 196 AMAALYLASDAGKYVNGNTLIVDGG 220
             AA++LAS+A  +  G  L+V GG
Sbjct: 225 GAAAVFLASEAN-FCTGIELLVTGG 248

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  152 bits (387), Expect = 1e-45
 Identities = 58/231 (25%), Positives = 92/231 (39%), Gaps = 22/231 (9%)

Query: 2   GRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
            R+   L  A  +L    G+  + +  DV   E    VVES  + FG  DILVN A    
Sbjct: 38  ARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGS 97

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
                + +   ++   E+  +    +    +  ++  G        GG II+ ++     
Sbjct: 98  NETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARG--------GGAIIHNASICAVQ 149

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
             WY+   +  KAA+   +++LA E   D  IRVN I PG I  T    K A E  +   
Sbjct: 150 PLWYEPIYNVTKAALMMFSKTLATEVIKD-NIRVNCINPGLI-LTPDWIKTAKELTKDNG 207

Query: 181 TDYMAAYK-----------FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            D+    +           F    ++A   ++L S+   Y  G+   VDGG
Sbjct: 208 GDWKGYLQSVADEHAPIKRFASPEELANFFVFLCSERATYSVGSAYFVDGG 258

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  152 bits (386), Expect = 1e-45
 Identities = 61/207 (29%), Positives = 96/207 (46%), Gaps = 15/207 (7%)

Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 78
            I     + D+    + VR VE      G++D+LVN AA      A  +    +R V+E+
Sbjct: 48  AIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEV 107

Query: 79  DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSI 138
           +      +   A + ++K G        GG I+N+++     A       +A+K  + ++
Sbjct: 108 NLTAPMHLSALAAREMRKVG--------GGAIVNVASVQGLFAEQENAAYNASKGGLVNL 159

Query: 139 TRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMAAYKFGEKW 193
           TRSLAL+      IRVN +APG I  T  V +       PE  R    D  A  + G+  
Sbjct: 160 TRSLALDLA-PLRIRVNAVAPGAI-ATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPE 217

Query: 194 DIAMAALYLASDAGKYVNGNTLIVDGG 220
           ++A A L+LAS+   ++ G  L VDGG
Sbjct: 218 EVAEAVLFLASEKASFITGAILPVDGG 244

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  151 bits (384), Expect = 2e-45
 Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 12/221 (5%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFL 61
             +  L   V  L  +G   +G++ DV K++D    V  T   + ++D+L  NA   + +
Sbjct: 39  LLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGV 98

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            P  ++S   +  V+ ++    F      +  + K G         G+I+N ++      
Sbjct: 99  TPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG--------KGVIVNTASIAGIRG 150

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD--TAGVSKLAPEEIRSK 179
            +     + AK  +  +TRS+A  +G D  IR   + PG +K     G SK +   +R+ 
Sbjct: 151 GFAGAPYTVAKHGLIGLTRSIAAHYG-DQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTL 209

Query: 180 ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                 + +  E  DIA   ++LASD   +VNG+ ++VDGG
Sbjct: 210 TKLMSLSSRLAEPEDIANVIVFLASDEASFVNGDAVVVDGG 250

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  151 bits (385), Expect = 2e-45
 Identities = 45/204 (22%), Positives = 86/204 (42%), Gaps = 14/204 (6%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81
            + L GD+R+   A  +  +     G+LDI+VN A         + +   +   + ++  
Sbjct: 68  DLHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVE 127

Query: 82  GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 141
             F +C  A+  +   G        GG I+N+++                KAA+ S+T+ 
Sbjct: 128 APFRICRAAIPLMAAAG--------GGAIVNVASCWGLRPGPGHALYCLTKAALASLTQC 179

Query: 142 LALEWGTDYAIRVNGIAPGPI-----KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA 196
           + ++      IR+N + P  +     +         P+   ++    +   +  E  DIA
Sbjct: 180 MGMDHAPQ-GIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIA 238

Query: 197 MAALYLASDAGKYVNGNTLIVDGG 220
              L+LASDA +Y+ G+ + V+GG
Sbjct: 239 DVVLFLASDAARYLCGSLVEVNGG 262

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  151 bits (384), Expect = 3e-45
 Identities = 49/233 (21%), Positives = 83/233 (35%), Gaps = 25/233 (10%)

Query: 2   GRRKTVLRSAVAAL--HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN 59
            R    LR+A +AL     G        DV          E+     G   ILVN A   
Sbjct: 39  ARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGCASILVNNAGQG 98

Query: 60  FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 119
            +    + +   +   +++            L  L+              I+ +++ L  
Sbjct: 99  RVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRA--------DAAIVCVNSLLAS 150

Query: 120 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 179
               + +  SAA+A V ++ RS+A E+     +RVNGI  G + ++    +   E    +
Sbjct: 151 QPEPHMVATSAARAGVKNLVRSMAFEFAPK-GVRVNGILIGLV-ESGQWRRR-FEAREER 207

Query: 180 ATDYMAAYK------------FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             D+                  G+  + A A L+LAS    Y  G+ + V GG
Sbjct: 208 ELDWAQWTAQLARNKQIPLGRLGKPIEAARAILFLASPLSAYTTGSHIDVSGG 260

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  150 bits (382), Expect = 6e-45
 Identities = 45/217 (20%), Positives = 87/217 (40%), Gaps = 17/217 (7%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
                   G+     + DV   +   + ++      G +  L+  A  + + PA +L+  
Sbjct: 55  TEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHE 114

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS-------ATLHYTATW 123
            F  V +++  G F  C    K   +  +        G I+  S              + 
Sbjct: 115 DFAFVYDVNVFGVFNTCRAVAKLWLQKQQK-------GSIVVTSSMSSQIINQSSLNGSL 167

Query: 124 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY 183
            Q+  +++KAA  ++ + LA EW     IRVN ++PG + +T   + +  ++IR      
Sbjct: 168 TQVFYNSSKAACSNLVKGLAAEWA-SAGIRVNALSPGYV-NTDQTAHM-DKKIRDHQASN 224

Query: 184 MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           +   +F +  ++   A+ L SD   Y+ G    +DGG
Sbjct: 225 IPLNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGG 261

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  149 bits (380), Expect = 9e-45
 Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 11/211 (5%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
           A AA+ +LG   + ++ DV +  D     +  I+ FG+ DILVN A    L+P ++L+  
Sbjct: 45  AEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFE 104

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            ++   EI+    F+M    +  +K+ G         G IIN+++T ++       H  +
Sbjct: 105 QWKKTFEINVDSGFLMAKAFVPGMKRNG--------WGRIINLTSTTYWLKIEAYTHYIS 156

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-F 189
            KAA    TR+LA + G    I VN IAP  +  TA     A   +     + + A    
Sbjct: 157 TKAANIGFTRALASDLGK-DGITVNAIAPSLV-RTATTEASALSAMFDVLPNMLQAIPRL 214

Query: 190 GEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
               D+  AA +LASD   ++ G TL VDGG
Sbjct: 215 QVPLDLTGAAAFLASDDASFITGQTLAVDGG 245

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  150 bits (381), Expect = 1e-44
 Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 11/212 (5%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVN-AAAGNFLVPAEDLSPN 70
           VAA+   G  A+ + GDV    D   +  +    FG+LD LVN A   ++    +++S  
Sbjct: 68  VAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVE 127

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS--ATLHYTATWYQIHV 128
               ++ ++  G+ +   EA++ + +   GQ     GG I+N+S  A +  +AT Y +  
Sbjct: 128 RIERMLRVNVTGSILCAAEAVRRMSRLYSGQ-----GGAIVNVSSMAAILGSATQY-VDY 181

Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK 188
           +A+KAA+D+ T  LA E      IRVN + PG I +T   +     +   +    +   +
Sbjct: 182 AASKAAIDTFTIGLAREVA-AEGIRVNAVRPGII-ETDLHASGGLPDRAREMAPSVPMQR 239

Query: 189 FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            G   ++A A LYL S +  YV G+ L V GG
Sbjct: 240 AGMPEEVADAILYLLSPSASYVTGSILNVSGG 271

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  149 bits (380), Expect = 1e-44
 Identities = 52/214 (24%), Positives = 92/214 (42%), Gaps = 14/214 (6%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA---AGNFLVPAEDL 67
           A    H+     + +  DV    D    + +T+  FG +D+LVN A     +        
Sbjct: 43  ARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTT 102

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
               F  V+ ++  G F+ C   L ++   G         G+I+NI++     A   +  
Sbjct: 103 PVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG--------AGVIVNIASVASLVAFPGRSA 154

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAA 186
            + +K AV  +T+S+A+++     IR N + PG I +T          E+R +    +  
Sbjct: 155 YTTSKGAVLQLTKSVAVDYAGS-GIRCNAVCPGMI-ETPMTQWRLDQPELRDQVLARIPQ 212

Query: 187 YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            + G    +A A ++LA +   YVNG  L++DG 
Sbjct: 213 KEIGTAAQVADAVMFLAGEDATYVNGAALVMDGA 246

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  150 bits (381), Expect = 1e-44
 Identities = 61/221 (27%), Positives = 93/221 (42%), Gaps = 16/221 (7%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
           L   V  + +     +    D R  +   +VV+  +   G+LDI+V  A        +D+
Sbjct: 61  LSETVRLVEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDI 120

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
           +P  FR V++I+  GT+         + +GGRG       G II IS+        + IH
Sbjct: 121 TPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRG-------GSIILISSAAGMKMQPFMIH 173

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI--------KDTAGVSKLAPEEIRSK 179
            +A+K AV  + R+ A E G  ++IRVN + PGP+          TA    +      S 
Sbjct: 174 YTASKHAVTGLARAFAAELGK-HSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSH 232

Query: 180 ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                      E  DIA    +LASD  + V    + VD G
Sbjct: 233 VLTPFLPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQG 273

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  149 bits (378), Expect = 2e-44
 Identities = 38/219 (17%), Positives = 73/219 (33%), Gaps = 17/219 (7%)

Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAE 65
            S   A       +          +   R+V++T+ H   +D +V+          +P E
Sbjct: 33  ASFADAAERQRFESENPGTIALAEQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLE 92

Query: 66  DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 125
             S    R + E  S+   ++   A+  L+  G        G  +I I++++      Y 
Sbjct: 93  GTSEADIRQMFEALSIFPILLLQSAIAPLRAAG--------GASVIFITSSVGKKPLAYN 144

Query: 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSKAT 181
                A+AA  ++  S A        I +  I P    +       +      E+R +  
Sbjct: 145 PLYGPARAATVALVESAAKTLSR-DGILLYAIGPNFF-NNPTYFPTSDWENNPELRERVD 202

Query: 182 DYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             +   + G   ++     +LAS     + G      GG
Sbjct: 203 RDVPLGRLGRPDEMGALITFLASRRAAPIVGQFFAFTGG 241

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  149 bits (378), Expect = 2e-44
 Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 16/215 (7%)

Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV---PAE 65
            +    + + G  AI +  DV   E A  + + T+  FG +D LVN AA    +      
Sbjct: 47  EAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLL 106

Query: 66  DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 125
            + P  ++  + ++  G         K + K G        GG I+N S+T    A  Y 
Sbjct: 107 TIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRG--------GGAIVNQSST---AAWLYS 155

Query: 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA 185
            +   AK  ++ +T+ L+ E G    IR+N IAPGPI DT       P+E+       + 
Sbjct: 156 NYYGLAKVGINGLTQQLSRELGG-RNIRINAIAPGPI-DTEANRTTTPKEMVDDIVKGLP 213

Query: 186 AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             + G   D+    L+L SD   ++ G    VDGG
Sbjct: 214 LSRMGTPDDLVGMCLFLLSDEASWITGQIFNVDGG 248

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  150 bits (380), Expect = 2e-44
 Identities = 50/216 (23%), Positives = 80/216 (37%), Gaps = 16/216 (7%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
           A AA   +G  A     DV   +  + +V++ +  FG +D LV  A    L    D +  
Sbjct: 66  ADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVE 125

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            F  VI I+  G ++    A   + + G        GG I+N+S+     A         
Sbjct: 126 DFDRVIAINLRGAWLCTKHAAPRMIERG--------GGAIVNLSSLAGQVAVGGTGAYGM 177

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-- 188
           +KA +  ++R  A E      IR N + P  + DT            +       +    
Sbjct: 178 SKAGIIQLSRITAAELR-SSGIRSNTLLPAFV-DTPMQQTAMAMFDGALGAGGARSMIAR 235

Query: 189 ----FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                    ++A   ++L SD    + G T I DGG
Sbjct: 236 LQGRMAAPEEMAGIVVFLLSDDASMITGTTQIADGG 271

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score =  149 bits (379), Expect = 3e-44
 Identities = 58/227 (25%), Positives = 91/227 (40%), Gaps = 22/227 (9%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAED 66
           L      +       +  E DVR  +     V+S +   G+LDI+V NA  GN     + 
Sbjct: 64  LAETADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDK 123

Query: 67  LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 126
            S   +  +I+I+  G +      + ++  GGRG       G II  S+     A  +  
Sbjct: 124 TSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRG-------GSIILTSSVGGLKAYPHTG 176

Query: 127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI-----KDTAGVSKLAPEEIRSKAT 181
           H  AAK  V  + R+  +E G  + IRVN + P  +      +        P+       
Sbjct: 177 HYVAAKHGVVGLMRAFGVELGQ-HMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPD 235

Query: 182 DYMAAYK--------FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           D     +        + E  DI+ A L+ ASD  +Y+ G TL +D G
Sbjct: 236 DMAPICQMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAG 282

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  149 bits (378), Expect = 3e-44
 Identities = 63/221 (28%), Positives = 94/221 (42%), Gaps = 15/221 (6%)

Query: 3   RRKTVLRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R       V  L  + GI A   +  V   E   ++V+  +  FG++D  +  A     
Sbjct: 55  SRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATAD 114

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ--ASSSSGGIIINISATLHY 119
               D S   +  V+++D  GTF        + K+ G G    ++S  G I N       
Sbjct: 115 SGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQ---- 170

Query: 120 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 179
                Q   + AKA    + RSLA EW  D+  RVN I+PG I DT  +S   P+E +  
Sbjct: 171 ----EQTSYNVAKAGCIHMARSLANEWR-DF-ARVNSISPGYI-DTG-LSDFVPKETQQL 222

Query: 180 ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
               +   + G   ++  A +Y ASDA  Y  G  L++DGG
Sbjct: 223 WHSMIPMGRDGLAKELKGAYVYFASDASTYTTGADLLIDGG 263

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  148 bits (375), Expect = 7e-44
 Identities = 49/229 (21%), Positives = 88/229 (38%), Gaps = 26/229 (11%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAED 66
           L  A A++   G+ A     DV   E  +  V+S +  FGK+D L  NA       P +D
Sbjct: 44  LEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQD 103

Query: 67  LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 126
              + F  V+ I+  G F +     + +             G I+N ++           
Sbjct: 104 YPSDDFARVLTINVTGAFHVLKAVSRQMITQN--------YGRIVNTASMAGVKGPPNMA 155

Query: 127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-------------- 172
               +K A+ ++T + AL+    Y IRVN I+PG +     + +                
Sbjct: 156 AYGTSKGAIIALTETAALDLA-PYNIRVNAISPGYM-GPGFMWERQVELQAKVGSQYFST 213

Query: 173 -PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            P+ +  +    +   ++G+  +I     +L  D   ++ G  L + GG
Sbjct: 214 DPKVVAQQMIGSVPMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG 262

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  148 bits (376), Expect = 7e-44
 Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 22/220 (10%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
           V+ + +LG  AI ++ D+R+  + V++ +  + HFG LDI V+ +        +D++   
Sbjct: 60  VSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEE 119

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-YQIHVSA 130
           F  V  +++ G F +  EA ++L +GGR          I+  S+      +       S 
Sbjct: 120 FDRVFSLNTRGQFFVAREAYRHLTEGGR----------IVLTSSNTSKDFSVPKHSLYSG 169

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK----------DTAGVSKLAPEEIRSKA 180
           +K AVDS  R  + + G D  I VN +APG                  +    E+ +  A
Sbjct: 170 SKGAVDSFVRIFSKDCG-DKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMA 228

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                 ++ G   D+A    +L S  G++VNG  L +DGG
Sbjct: 229 AHASPLHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGG 268

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  148 bits (376), Expect = 7e-44
 Identities = 52/221 (23%), Positives = 95/221 (42%), Gaps = 23/221 (10%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
           VA L  LG   + ++ D+ K  + V + +  ++HFG LD +++ +         +++   
Sbjct: 63  VAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQEL 122

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL-HYTATWYQIHVSA 130
           F  V  +++ G F +  + LK+ ++GGR          II  S+     T        + 
Sbjct: 123 FDKVFNLNTRGQFFVAQQGLKHCRRGGR----------IILTSSIAAVMTGIPNHALYAG 172

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK-----------DTAGVSKLAPEEIRSK 179
           +KAAV+   R+ A++ G    + VN IAPG +K              G   +  E+I   
Sbjct: 173 SKAAVEGFCRAFAVDCG-AKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEG 231

Query: 180 ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             +     + G   DI  A   L  +  +++NG  + + GG
Sbjct: 232 LANMNPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGG 272

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  147 bits (374), Expect = 2e-43
 Identities = 53/220 (24%), Positives = 89/220 (40%), Gaps = 15/220 (6%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
           L      +   G  A+    DVR       +V   +  FG+LD++V  A         +L
Sbjct: 65  LDETARLVEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWEL 124

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
           +   + TVI ++  GT+      +  + + G G       G I+ +S++    AT    H
Sbjct: 125 TDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNG-------GSIVVVSSSAGLKATPGNGH 177

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK-------DTAGVSKLAPEEIRSKA 180
            SA+K  + ++T +LA+E G  Y IRVN I P  ++           +    P  + S  
Sbjct: 178 YSASKHGLTALTNTLAIELGE-YGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFP 236

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
              +    F    ++A    +LA D    + G  + VD G
Sbjct: 237 PMPVQPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKG 276

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  147 bits (374), Expect = 2e-43
 Identities = 63/221 (28%), Positives = 99/221 (44%), Gaps = 23/221 (10%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
           VAA+   G  A  ++ +V   ED VR+ E  +  FGKLDI+ + +        +D++P  
Sbjct: 71  VAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEE 130

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL-HYTATWYQIHVSA 130
           F  V  I++ G F +  EA K+L+ GGR          +I + +      A       S 
Sbjct: 131 FDRVFTINTRGQFFVAREAYKHLEIGGR----------LILMGSITGQAKAVPKHAVYSG 180

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK-----------DTAGVSKLAPEEIRSK 179
           +K A+++  R +A++   D  I VN +APG IK              G +    E     
Sbjct: 181 SKGAIETFARCMAIDMA-DKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYA 239

Query: 180 ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           A  +    + G   DIA    +LAS+ G +V G  + +DGG
Sbjct: 240 AVQWSPLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGG 280

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  147 bits (373), Expect = 2e-43
 Identities = 62/210 (29%), Positives = 93/210 (44%), Gaps = 15/210 (7%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
           V+ +   G  A+ +  D R  E   + +  T+   G LDILVN+A      P E+ +   
Sbjct: 73  VSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVAD 132

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-YQIHVSA 130
           F  V+ ++    F+    A ++L  GGR          II I + L     W      SA
Sbjct: 133 FDEVMAVNFRAPFVAIRSASRHLGDGGR----------IITIGSNLAELVPWPGISLYSA 182

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 190
           +KAA+  +T+ LA + G    I VN + PG   DT         +      + +A   +G
Sbjct: 183 SKAALAGLTKGLARDLGP-RGITVNIVHPGST-DTDMNPAD--GDHAEAQRERIATGSYG 238

Query: 191 EKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           E  DIA    +LA   GK+V G +L +DGG
Sbjct: 239 EPQDIAGLVAWLAGPQGKFVTGASLTIDGG 268

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  146 bits (372), Expect = 2e-43
 Identities = 55/222 (24%), Positives = 97/222 (43%), Gaps = 17/222 (7%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
           A A +  L      +E DV KR      ++  I+  G  D+L   A  + + PA D++  
Sbjct: 49  AQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDE 108

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            +    ++++ G F+    A ++            + G+I+N ++           H SA
Sbjct: 109 EWDFNFDVNARGVFLANQIACRHFLASN-------TKGVIVNTASLAAKVGAPLLAHYSA 161

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK---------DTAGVSKLAPEEIRSKAT 181
           +K AV   T++LA E      IRVN + PG +K           A +  + PE +R++  
Sbjct: 162 SKFAVFGWTQALAREMAP-KNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYV 220

Query: 182 DYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 223
                 +  E  D+A   ++LASDA +++ G  + V GG  +
Sbjct: 221 SLTPLGRIEEPEDVADVVVFLASDAARFMTGQGINVTGGVRM 262

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  146 bits (372), Expect = 2e-43
 Identities = 46/216 (21%), Positives = 96/216 (44%), Gaps = 9/216 (4%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAED 66
           +   +A++ + G  A     D+   E   ++V+  +  FG +D+L+ NA       P  +
Sbjct: 45  IDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPE 104

Query: 67  LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-Q 125
           +    +  V++ +     +    AL +L    +    S     +I+  +   +T      
Sbjct: 105 IDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKA---SGQTSAVISTGSIAGHTGGGPGA 161

Query: 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA 185
               AAKA + ++ ++       D  +R N ++PG + DTA  +    +++R + ++ + 
Sbjct: 162 GLYGAAKAFLHNVHKNWVDFHTKD-GVRFNIVSPGTV-DTAFHADK-TQDVRDRISNGIP 218

Query: 186 AYKFGEKWDIAMAALYLASD-AGKYVNGNTLIVDGG 220
             +FG   ++A A L+ AS  A  Y+ G  L ++GG
Sbjct: 219 MGRFGTAEEMAPAFLFFASHLASGYITGQVLDINGG 254

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  146 bits (370), Expect = 4e-43
 Identities = 63/210 (30%), Positives = 97/210 (46%), Gaps = 18/210 (8%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
           A+AA   L   A  +  DV +       V++ +  FG L +LVN A    +   ED +  
Sbjct: 46  AMAA--ELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALT 103

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            ++ +++++  G F+     +K +K+ G         G IINIS+      T      +A
Sbjct: 104 EWQRILDVNLTGVFLGIRAVVKPMKEAG--------RGSIINISSIEGLAGTVACHGYTA 155

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 190
            K AV  +T+S ALE G    IRVN I PG +  T     + PE+I   A   +   +  
Sbjct: 156 TKFAVRGLTKSTALELG-PSGIRVNSIHPGLV-KTPMTDWV-PEDIFQTA---LG--RAA 207

Query: 191 EKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           E  +++   +YLASD   Y  G   +VDGG
Sbjct: 208 EPVEVSNLVVYLASDESSYSTGAEFVVDGG 237

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  145 bits (369), Expect = 5e-43
 Identities = 64/211 (30%), Positives = 85/211 (40%), Gaps = 12/211 (5%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
             A    LG  A     DV   ED  RVV      FG +D LVN A  +  +  E  S  
Sbjct: 42  GAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVE 101

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            FR V+EI+  G FI     +  +K  G        GG I+NIS+              A
Sbjct: 102 RFRKVVEINLTGVFIGMKTVIPAMKDAG--------GGSIVNISSAAGLMGLALTSSYGA 153

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 190
           +K  V  +++  A+E G    IRVN + PG    T   ++                 + G
Sbjct: 154 SKWGVRGLSKLAAVELG-TDRIRVNSVHPGMT-YTPMTAET-GIRQGEGNYPNTPMGRVG 210

Query: 191 EK-WDIAMAALYLASDAGKYVNGNTLIVDGG 220
            +  +IA A + L SD   YV G  L VDGG
Sbjct: 211 NEPGEIAGAVVKLLSDTSSYVTGAELAVDGG 241

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  145 bits (369), Expect = 7e-43
 Identities = 56/209 (26%), Positives = 89/209 (42%), Gaps = 21/209 (10%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81
           +   + DV   E+    VE T   +G++DILVN A      P        +R +I+++  
Sbjct: 55  SDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVN 114

Query: 82  GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 141
           G+++M    +  +   G         G IINI++   Y AT        +K A+  +TRS
Sbjct: 115 GSYLMAKYTIPVMLAIG--------HGSIINIASVQSYAATKNAAAYVTSKHALLGLTRS 166

Query: 142 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK----------FGE 191
           +A+++     IR N + PG I  T  V K A  E+           +           G 
Sbjct: 167 VAIDYAPK--IRCNAVCPGTI-MTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGR 223

Query: 192 KWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             ++A    +LASD   ++ G  L VDGG
Sbjct: 224 PEEVAEVVAFLASDRSSFITGACLTVDGG 252

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  145 bits (368), Expect = 9e-43
 Identities = 50/209 (23%), Positives = 84/209 (40%), Gaps = 21/209 (10%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81
              +E DV   +     ++     +G + +LVN A        E +S   +R +I+++  
Sbjct: 48  YDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLF 107

Query: 82  GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 141
           G +     A+ Y+ +             I+NIS+      T        +K AV  +T+S
Sbjct: 108 GYYYASKFAIPYMIRSR--------DPSIVNISSVQASIITKNASAYVTSKHAVIGLTKS 159

Query: 142 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK----------FGE 191
           +AL++     +R N + P  I DT  V K A  E+ S                     G+
Sbjct: 160 IALDYAPL--LRCNAVCPATI-DTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGK 216

Query: 192 KWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             ++A A  +LAS    ++ G  L VDGG
Sbjct: 217 PQEVASAVAFLASREASFITGTCLYVDGG 245

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score =  145 bits (369), Expect = 1e-42
 Identities = 62/227 (27%), Positives = 83/227 (36%), Gaps = 17/227 (7%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
           L  A   +   G  A   E DVR R    R + + +  FGKLD++V  A          L
Sbjct: 59  LEEAGLEVEKTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAG--ICPLGAHL 116

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QI 126
               F    ++D VG     H AL YL  G     + S  G+I                 
Sbjct: 117 PVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGAGGPQGPGGA 176

Query: 127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI-----KDTAGVSKLAPEEIRSKAT 181
             S AK  VDS T  LA +     +IR N I P  +            +  P+       
Sbjct: 177 GYSYAKQLVDSYTLQLAAQLA-PQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRA 235

Query: 182 DYMAAY--------KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           D + A+         + E  DI+ A  +LASD  +YV G    VD G
Sbjct: 236 DALLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAG 282

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  144 bits (366), Expect = 1e-42
 Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 15/209 (7%)

Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 78
            + A+ L  D+  ++D   +V+  +   G L +LV+AAA N   PA +LS   +R V+ +
Sbjct: 42  SLGAVPLPTDLE-KDDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYL 100

Query: 79  DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY--QIHVSAAKAAVD 136
                F++   A  ++ + G G+        ++ I +   +TA         + AK A+ 
Sbjct: 101 HLDVAFLLAQAAAPHMAEAGWGR--------VLFIGSVTTFTAGGPVPIPAYTTAKTALL 152

Query: 137 SITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDI 195
            +TR+LA EW     IRVN + PG + +T     L    E+    T  +   ++    +I
Sbjct: 153 GLTRALAKEWA-RLGIRVNLLCPGYV-ETEFTLPLRQNPELYEPITARIPMGRWARPEEI 210

Query: 196 AMAALYLASDAGKYVNGNTLIVDGGNWLS 224
           A  A  L  D  +Y+ G  + VDGG +L+
Sbjct: 211 ARVAAVLCGDEAEYLTGQAVAVDGG-FLA 238

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  144 bits (365), Expect = 1e-42
 Identities = 42/209 (20%), Positives = 79/209 (37%), Gaps = 24/209 (11%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81
              ++ D+ K++D   V++         D +   A         D+     + V++++  
Sbjct: 46  LKFIKADLTKQQDITNVLDII--KNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVW 103

Query: 82  GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 141
            +          LK G            I+   +   + A       + +K A+  +T+S
Sbjct: 104 SSIYFIKGLENNLKVGAS----------IVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKS 153

Query: 142 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK----------FGE 191
           LAL+    Y IRVN + PG + DT     L  +   +    +  A K            +
Sbjct: 154 LALDLA-KYQIRVNTVCPGTV-DTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQ 211

Query: 192 KWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             +IA   ++L SD  K++ G  + +DGG
Sbjct: 212 PQEIAELVIFLLSDKSKFMTGGLIPIDGG 240

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  145 bits (367), Expect = 2e-42
 Identities = 45/224 (20%), Positives = 75/224 (33%), Gaps = 25/224 (11%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA-----AGNFLVPAE 65
                 + G  A+G+ GDVR  +D  R  E  +  FGK+D L+  A     +       E
Sbjct: 42  LRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPE 101

Query: 66  DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 125
           D     F  +  ++  G        L  L             G ++   +   +      
Sbjct: 102 DKIDAAFDDIFHVNVKGYIHAVKACLPALVSS---------RGSVVFTISNAGFYPNGGG 152

Query: 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK----DTAGVSKLAPEEIRSKAT 181
              +A K AV  + R +A E      +RVNG+APG +       + +             
Sbjct: 153 PLYTATKHAVVGLVRQMAFELAPH--VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLA 210

Query: 182 DYMAAY----KFGEKWDIAMAALYLASD-AGKYVNGNTLIVDGG 220
           D + +     +     +   A ++ A+        G  L  DGG
Sbjct: 211 DMLKSVLPIGRMPALEEYTGAYVFFATRGDSLPATGALLNYDGG 254

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score =  145 bits (368), Expect = 2e-42
 Identities = 59/214 (27%), Positives = 91/214 (42%), Gaps = 14/214 (6%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA-EDLSPN 70
            A +   G  A+ L GD+     A  +V       G LDIL   A     +P  +DL+  
Sbjct: 92  KALIEECGRKAVLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSE 151

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            F+    ++    F +  EA+  L KG            II  S+   Y  + + +  +A
Sbjct: 152 QFQQTFAVNVFALFWITQEAIPLLPKGAS----------IITTSSIQAYQPSPHLLDYAA 201

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG-VSKLAPEEIRSKATDYMAAYKF 189
            KAA+ + +R LA +   +  IRVN +APGPI  TA  +S    ++   +        + 
Sbjct: 202 TKAAILNYSRGLAKQVA-EKGIRVNIVAPGPI-WTALQISGGQTQDKIPQFGQQTPMKRA 259

Query: 190 GEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 223
           G+  ++A   +YLAS    YV      V GG  L
Sbjct: 260 GQPAELAPVYVYLASQESSYVTAEVHGVCGGEHL 293

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  143 bits (364), Expect = 5e-42
 Identities = 50/222 (22%), Positives = 88/222 (39%), Gaps = 13/222 (5%)

Query: 2   GRRKTVLRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVN-AAAGN 59
           GRR  VL +A   +    G     +  DV   +    +  +    F +LD+LVN A +  
Sbjct: 64  GRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNV 123

Query: 60  FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 119
             VP E+++   +  ++  +  G F+    A + +K           GG IIN  +    
Sbjct: 124 PPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPR------GGRIINNGSISAQ 177

Query: 120 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 179
           T        +A K A+  +T+S AL+    + I    I  G    T   ++++   +++ 
Sbjct: 178 TPRPNSAPYTATKHAITGLTKSTALDGR-MHDIACGQIDIGNA-ATDMTARMSTGVLQAN 235

Query: 180 ATDYMAAYKFGEKWDIAMAALYLASD-AGKYVNGNTLIVDGG 220
               +AA        IA A +Y+AS      V   T++    
Sbjct: 236 GE--VAAEPTIPIEHIAEAVVYMASLPLSANVLTMTVMATRM 275

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score =  144 bits (365), Expect = 6e-42
 Identities = 58/227 (25%), Positives = 98/227 (43%), Gaps = 22/227 (9%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAED 66
           L   V  + +LG   I  + DVR  +     V+  +   G+LDI++ NAA  +       
Sbjct: 77  LAETVRQVEALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNR 136

Query: 67  LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 126
           + P  +R +I+++  G +I    A+ ++  G RG       G I+  S+           
Sbjct: 137 MDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRG-------GSIVFTSSIGGLRGAENIG 189

Query: 127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI-----KDTAGVSKLAPEEIRSKAT 181
           +  A+K  +  + R++ALE G    IRVN + P  +      +        P+       
Sbjct: 190 NYIASKHGLHGLMRTMALELGP-RNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVE 248

Query: 182 DYMAAYK--------FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           D+  A +        + E  DI+ A L+L SD  +Y+ G +L VDGG
Sbjct: 249 DFQVASRQMHVLPIPYVEPADISNAILFLVSDDARYITGVSLPVDGG 295

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  142 bits (360), Expect = 9e-42
 Identities = 39/215 (18%), Positives = 64/215 (29%), Gaps = 25/215 (11%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG-NFLVPAEDLSP 69
                                 E+   V+E   +   K+D  V AA G +    + D   
Sbjct: 50  ISIDFRENPNADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFL 109

Query: 70  NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 129
              + +I+++    F   H   K L +GG            +   A+     T   I   
Sbjct: 110 KSVKGMIDMNLYSAFASAHIGAKLLNQGGL----------FVLTGASAALNRTSGMIAYG 159

Query: 130 AAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT--DYMAA 186
           A KAA   I + LA E G         GI P  + DT    K   +      T    +A 
Sbjct: 160 ATKAATHHIIKDLASENGGLPAGSTSLGILPVTL-DTPTNRKYMSDANFDDWTPLSEVA- 217

Query: 187 YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN 221
                         +  +   +  NG+ +  +  +
Sbjct: 218 ---------EKLFEWSTNSDSRPTNGSLVKFETKS 243

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score =  144 bits (365), Expect = 9e-42
 Identities = 56/226 (24%), Positives = 96/226 (42%), Gaps = 21/226 (9%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
           L+  V  +   G   I  + DVR       VV+  +  FG +DILV+    +       L
Sbjct: 95  LKETVRLVEEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSL 154

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
           +   +  +++ + +G +  C   L  + + G+G       G +I +S+T+       Q H
Sbjct: 155 TDQQWSDILQTNLIGAWHACRAVLPSMIERGQG-------GSVIFVSSTVGLRGAPGQSH 207

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI-----KDTAGVSKLAPEEIRSKATD 182
            +A+K  V  +  SLA E G  + IRVN + PG +      +   +    P        D
Sbjct: 208 YAASKHGVQGLMLSLANEVGR-HNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTRED 266

Query: 183 YMAAYK--------FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
               +         + E  D++ A  +LASD  +Y++G  + VDGG
Sbjct: 267 AAELFSQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGG 312

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  142 bits (361), Expect = 1e-41
 Identities = 58/228 (25%), Positives = 91/228 (39%), Gaps = 20/228 (8%)

Query: 3   RRKTVLRSAVAALHSLGIP--AIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGN 59
                L ++ AA+         +    DV         V +T   FG++D    NA    
Sbjct: 45  VSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEG 104

Query: 60  FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 119
              P E  +   F  V+ I+  G F+   + LK +++ G         G+++N ++    
Sbjct: 105 KQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG--------SGMVVNTASVGGI 156

Query: 120 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 179
                Q   +AAK  V  +TR+ A+E+G  Y IR+N IAPG I  T  V     +     
Sbjct: 157 RGIGNQSGYAAAKHGVVGLTRNSAVEYG-RYGIRINAIAPGAI-WTPMVENSMKQLDPEN 214

Query: 180 ATDYMAAYK-------FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                  +        +GE  +IA    +L SD   YVN   + +DGG
Sbjct: 215 PRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGG 262

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  142 bits (360), Expect = 1e-41
 Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 14/221 (6%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
              A+ +L   AI +  DV   +    V    +  FG+L  + + A       + +L   
Sbjct: 43  LAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLE 102

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            +  V+ ++  G+F++  +A + L++GG           ++   +       +   H +A
Sbjct: 103 AWEKVLRVNLTGSFLVARKAGEVLEEGGS----------LVLTGSVAG-LGAFGLAHYAA 151

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 190
            K  V  + R+LALE      +RVN + PG I  T   + L P     +        + G
Sbjct: 152 GKLGVVGLARTLALELAR-KGVRVNVLLPGLI-QTPMTAGL-PPWAWEQEVGASPLGRAG 208

Query: 191 EKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPK 231
              ++A AAL+L S+   Y+ G  L VDGG  +  P  LP 
Sbjct: 209 RPEEVAQAALFLLSEESAYITGQALYVDGGRSIVGPPGLPP 249

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  140 bits (356), Expect = 7e-41
 Identities = 59/223 (26%), Positives = 93/223 (41%), Gaps = 17/223 (7%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA--AGNFLVPAEDLS 68
            V            +  DV K ED   +V++TI   GKLDI+               +  
Sbjct: 55  KVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAG 114

Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 128
              F+ V++I+  G F++   A + +             G I+  ++   +TA     HV
Sbjct: 115 NEDFKRVMDINVYGAFLVAKHAARVMIPAK--------KGSIVFTASISSFTAGEGVSHV 166

Query: 129 -SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 187
            +A K AV  +T SL  E G +Y IRVN ++P  +  +  ++ +   +          A 
Sbjct: 167 YTATKHAVLGLTTSLCTELG-EYGIRVNCVSPYIV-ASPLLTDVFGVDSSRVEELAHQAA 224

Query: 188 ----KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNP 226
                     D+A A  YLA D  KYV+G  L++DGG   +NP
Sbjct: 225 NLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNP 267

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score =  139 bits (353), Expect = 2e-40
 Identities = 56/225 (24%), Positives = 90/225 (40%), Gaps = 24/225 (10%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
           L + V  +  +G   +  + DVR RE     +++ ++  G+LDI+V  A     +     
Sbjct: 62  LAATVKLVEDIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAG----IAPMSA 117

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL----HYTATW 123
             +G+  VI+++  G +     A+  L K G        GG I+ IS++       +A  
Sbjct: 118 GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGT-------GGSIVLISSSAGLAGVGSADP 170

Query: 124 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI-----KDTAGVSKLAPEEIRS 178
             +   AAK  V  + R  A        IRVN I P  +      +      LA     +
Sbjct: 171 GSVGYVAAKHGVVGLMRVYANLLAG-QMIRVNSIHPSGVETPMINNEFTREWLAKMAAAT 229

Query: 179 KATDYMAAY---KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                M      +     D+A A  +L SD  +Y+ G TL VD G
Sbjct: 230 DTPGAMGNAMPVEVLAPEDVANAVAWLVSDQARYITGVTLPVDAG 274

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  139 bits (352), Expect = 3e-40
 Identities = 50/218 (22%), Positives = 86/218 (39%), Gaps = 17/218 (7%)

Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA------AGNFLV 62
              +A L  LG   I L  D+         V++ +  FG++D LVN A        +FL 
Sbjct: 68  APVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFL- 126

Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 122
              DL P  F T++ ++  GT       LK +               IINI++      +
Sbjct: 127 ---DLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARA-----SRSIINITSVSAVMTS 178

Query: 123 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD 182
             ++    +KA + + ++ LAL       I V  + PG I  +   + ++ +      + 
Sbjct: 179 PERLDYCMSKAGLAAFSQGLALRLAE-TGIAVFEVRPGII-RSDMTAAVSGKYDGLIESG 236

Query: 183 YMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            +   ++GE  DI      LA     +  G+ +  DGG
Sbjct: 237 LVPMRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGG 274

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  138 bits (349), Expect = 5e-40
 Identities = 45/223 (20%), Positives = 85/223 (38%), Gaps = 24/223 (10%)

Query: 2   GRRKTVLRSAVAALHSLGIPA---IGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAA 57
           GR +  LR   + ++           L+      E+  ++ +    ++ +LD ++ NA  
Sbjct: 43  GRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGL 102

Query: 58  GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 117
              + P  + +P  ++ V++++   TF++    L  L K           G ++  S+++
Sbjct: 103 LGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSD--------AGSLVFTSSSV 154

Query: 118 HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR 177
                      +A+K A + + + LA E+     +RVN I PG    TA  +   P E  
Sbjct: 155 GRQGRANWGAYAASKFATEGMMQVLADEYQQR--LRVNCINPGGT-RTAMRASAFPTED- 210

Query: 178 SKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                     K     DI    L+L  D  +   G T     G
Sbjct: 211 --------PQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQPG 245

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  139 bits (352), Expect = 9e-40
 Identities = 54/215 (25%), Positives = 85/215 (39%), Gaps = 24/215 (11%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
           + +A   + ++G  A+    DVR  +     VE  I  FG +DILVN A+   L    D 
Sbjct: 89  IYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDT 148

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
                  ++ +++ GT++     + YLKK             I+NIS  L+    W++ H
Sbjct: 149 PTKRLDLMMNVNTRGTYLASKACIPYLKKSK--------VAHILNISPPLNLNPVWFKQH 200

Query: 128 V--SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA 185
              + AK  +      +A E+  +  I VN + P     TA +  L    I         
Sbjct: 201 CAYTIAKYGMSMYVLGMAEEFKGE--IAVNALWPKTAIHTAAMDMLGGPGIE-------- 250

Query: 186 AYKFGEKWDI-AMAALYLASDAGKYVNGNTLIVDG 219
                 K DI A AA  +     K   GN +I + 
Sbjct: 251 --SQCRKVDIIADAAYSIFQKP-KSFTGNFVIDEN 282

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score =  138 bits (350), Expect = 9e-40
 Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 13/210 (6%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA-EDLSPN 70
              +   G+  + L GD+   +    +V+ T+   G L+ILVN  A  +     E ++  
Sbjct: 89  KQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAE 148

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
                  I+    F +   AL +LK+G            IIN ++ + Y      I  SA
Sbjct: 149 QLEKTFRINIFSYFHVTKAALSHLKQGDV----------IINTASIVAYEGNETLIDYSA 198

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 190
            K A+ + TRSL+        IRVNG+APGPI  T  +     E+  S+    +   + G
Sbjct: 199 TKGAIVAFTRSLSQSLV-QKGIRVNGVAPGPI-WTPLIPSSFDEKKVSQFGSNVPMQRPG 256

Query: 191 EKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           + +++A A +YLAS    YV G  + V+GG
Sbjct: 257 QPYELAPAYVYLASSDSSYVTGQMIHVNGG 286

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  136 bits (345), Expect = 2e-39
 Identities = 41/229 (17%), Positives = 85/229 (37%), Gaps = 26/229 (11%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNF 60
            R +  L+         G     + GD+ +     ++V + +   GK+D LV NA     
Sbjct: 35  ARSEAPLKKLKEKY---GDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEP 91

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
           +    ++  N ++ + +I+      +   AL  LKK         + G ++ +S+     
Sbjct: 92  VQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKK---------TNGNVVFVSSDACNM 142

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI--------KDTAGVSKLA 172
                    ++KAA++    +LA E   +  ++   +APG +        ++  G S ++
Sbjct: 143 YFSSWGAYGSSKAALNHFAMTLANE---ERQVKAIAVAPGIVDTDMQVNIRENVGPSSMS 199

Query: 173 PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG-KYVNGNTLIVDGG 220
            E+++          +  +    A     LA       VNG  L  +  
Sbjct: 200 AEQLK-MFRGLKENNQLLDSSVPATVYAKLALHGIPDGVNGQYLSYNDP 247

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  136 bits (346), Expect = 2e-39
 Identities = 52/216 (24%), Positives = 92/216 (42%), Gaps = 15/216 (6%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVN-AAAGNF 60
           GRR   L+   A +   G  A+ +  DV   +    +  +T+  FG++D+L N A  G  
Sbjct: 59  GRRLDALQETAAEI---GDDALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAP 115

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
            +P EDL+   ++ V++ +  G F+   EA + +K           GG IIN  +    +
Sbjct: 116 AIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPR------GGRIINNGSISATS 169

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
              Y    +A K A+  +T+S +L+    + I    I  G   DT    K+     ++  
Sbjct: 170 PRPYSAPYTATKHAITGLTKSTSLDGR-VHDIACGQIDIGNA-DTPMAQKMKAGVPQADL 227

Query: 181 TDYMAAYKFGEKWDIAMAALYLASD-AGKYVNGNTL 215
           +  +      +   +A A +Y+AS      V   T+
Sbjct: 228 SIKVE--PVMDVAHVASAVVYMASLPLDANVQFMTI 261

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  136 bits (344), Expect = 3e-39
 Identities = 50/219 (22%), Positives = 79/219 (36%), Gaps = 18/219 (8%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
           A+A +   G+ A+    D+        +       FG +DILVN A    + P E     
Sbjct: 42  ALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLE 101

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            +  +I ++    F     AL  ++            G IINI++      +  +    A
Sbjct: 102 SWDKIIALNLSAVFHGTRLALPGMRARN--------WGRIINIASVHGLVGSTGKAAYVA 153

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK---------DTAGVSKLAPEEIRSKAT 181
           AK  V  +T+ + LE  T   +  N I PG +          D A       +       
Sbjct: 154 AKHGVVGLTKVVGLETAT-SNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLA 212

Query: 182 DYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           +   +  F     +    L+L S+AG  V G    VDGG
Sbjct: 213 EKQPSLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGG 251

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  134 bits (340), Expect = 1e-38
 Identities = 36/209 (17%), Positives = 77/209 (36%), Gaps = 16/209 (7%)

Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIE 77
                  +      ++   ++E+  + +G++D+LV+         P +  +   +R  +E
Sbjct: 43  AFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVE 102

Query: 78  IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDS 137
              +  F + +     +KK   G         II I++   +         ++A+A   +
Sbjct: 103 ALQIRPFALVNAVASQMKKRKSGH--------IIFITSATPFGPWKELSTYTSARAGACT 154

Query: 138 ITRSLALEWGTDYAIRVNGIAPGPIK--DTAGVSKL----APEEIRSKATDYMAAYKFGE 191
           +  +L+ E G  Y I V  I P  +   D+             E  +      A  + G 
Sbjct: 155 LANALSKELGE-YNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGT 213

Query: 192 KWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           + ++     +LAS +  Y+ G    + GG
Sbjct: 214 QKELGELVAFLASGSCDYLTGQVFWLAGG 242

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  134 bits (339), Expect = 1e-38
 Identities = 59/214 (27%), Positives = 89/214 (41%), Gaps = 17/214 (7%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAED 66
           A AA  S+G  A  +  D+        +        G +DILVN A             D
Sbjct: 43  AKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDILVNNA-SIVPFVAWD---D 98

Query: 67  LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 126
           +  + +R +I+++  GTFI+       ++  G+        G +I+I++   +  T    
Sbjct: 99  VDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKA-------GRVISIASNTFFAGTPNMA 151

Query: 127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA 186
              AAK  V   TR+LA E G  Y I  N + PG I ++ GV      E         A 
Sbjct: 152 AYVAAKGGVIGFTRALATELGK-YNITANAVTPGLI-ESDGVKASPHNEAFGFVEMLQAM 209

Query: 187 YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
              G+   IA    +LASD  +++ G TL VD G
Sbjct: 210 KGKGQPEHIADVVSFLASDDARWITGQTLNVDAG 243

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  134 bits (339), Expect = 1e-38
 Identities = 53/208 (25%), Positives = 84/208 (40%), Gaps = 20/208 (9%)

Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 78
                    DV K++     ++   N   +LD+L N A         D     +   + +
Sbjct: 49  YPGIQTRVLDVTKKKQ----IDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNL 104

Query: 79  DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIHVSAAKAAVDS 137
           +    ++M    L  +             G IIN+S+          +   S  KAAV  
Sbjct: 105 NVRSMYLMIKAFLPKMLAQK--------SGNIINMSSVASSVKGVVNRCVYSTTKAAVIG 156

Query: 138 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMAAYKFGEK 192
           +T+S+A ++     IR N + PG + DT  + +       PEE R+         +F   
Sbjct: 157 LTKSVAADFIQQ-GIRCNCVCPGTV-DTPSLQERIQARGNPEEARNDFLKRQKTGRFATA 214

Query: 193 WDIAMAALYLASDAGKYVNGNTLIVDGG 220
            +IAM  +YLASD   YV GN +I+DGG
Sbjct: 215 EEIAMLCVYLASDESAYVTGNPVIIDGG 242

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  134 bits (339), Expect = 1e-38
 Identities = 44/212 (20%), Positives = 74/212 (34%), Gaps = 19/212 (8%)

Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS 68
            ++V  L   G  A+ L GD       +  ++        L  +V+  A  +L       
Sbjct: 62  HASVTELRQAG--AVALYGDFSCETGIMAFIDLLKTQTSSLRAVVH-NASEWLAETPGEE 118

Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 128
            + F  +  +  +  +++       L               I++IS  +    +   I  
Sbjct: 119 ADNFTRMFSVHMLAPYLINLHCEPLLTASE--------VADIVHISDDVTRKGSSKHIAY 170

Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK 188
            A KA ++S+T S A  +     ++VNGIAP  +              R+ A    A   
Sbjct: 171 CATKAGLESLTLSFAARFAPL--VKVNGIAPALL-MFQP---KDDAAYRANALAKSALGI 224

Query: 189 FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                 I  +  YL      YV G TL V+GG
Sbjct: 225 EPGAEVIYQSLRYLLD--STYVTGTTLTVNGG 254

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  133 bits (337), Expect = 2e-38
 Identities = 49/218 (22%), Positives = 77/218 (35%), Gaps = 22/218 (10%)

Query: 2   GRRKTVLRSAVAALHSLGIPA---IGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAA 57
           GR +  L      + S G P    I L  +    +    +     + FG+LD L+ NA+ 
Sbjct: 45  GRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASI 104

Query: 58  GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 117
                P E L    F  V+ ++   TF++    L  LK+             I   S+++
Sbjct: 105 IGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSE--------DASIAFTSSSV 156

Query: 118 HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR 177
                        +K A + + ++LA E     A+R N I PG    T   ++  P+E  
Sbjct: 157 GRKGRANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGAT-RTGMRAQAYPDEN- 214

Query: 178 SKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTL 215
                           DI    LYL       +NG  L
Sbjct: 215 --------PLNNPAPEDIMPVYLYLMGPDSTGINGQAL 244

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  133 bits (337), Expect = 3e-38
 Identities = 57/215 (26%), Positives = 90/215 (41%), Gaps = 17/215 (7%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF------GKLDILVNAAAGNFLVPAE 65
           V  + S G  A  +  ++        +  S  N         K DIL+N A        E
Sbjct: 49  VYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIE 108

Query: 66  DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 125
           + +   F  ++ +++   F +  +AL  L+   R          IINIS+     +    
Sbjct: 109 ETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSR----------IINISSAATRISLPDF 158

Query: 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA 185
           I  S  K A++++T +LA + G    I VN I PG +K       L+   ++  AT   A
Sbjct: 159 IAYSMTKGAINTMTFTLAKQLG-ARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISA 217

Query: 186 AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             + GE  DIA  A +LAS   ++V G  + V GG
Sbjct: 218 FNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGG 252

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  133 bits (337), Expect = 5e-38
 Identities = 50/225 (22%), Positives = 84/225 (37%), Gaps = 23/225 (10%)

Query: 12  VAALHSL-GIPAIGLEGDVRKREDAV----RVVESTINHFGKLDILVNAA---------- 56
           VA L++     A+  +GD+      +     +++ +   FG+ D+LVN A          
Sbjct: 53  VAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLP 112

Query: 57  -AGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISA 115
                              +   ++V    +     +   +GG  ++ + S   ++N+  
Sbjct: 113 GDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLS---VVNLCD 169

Query: 116 TLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE 175
            +           + AK A+  +TR+ ALE      IRVN +APG       + +   EE
Sbjct: 170 AMTDLPLPGFCVYTMAKHALGGLTRAAALELA-PRHIRVNAVAPGLSLLPPAMPQETQEE 228

Query: 176 IRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            R K               IA A  +L S    Y+ G TL VDGG
Sbjct: 229 YRRKV---PLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGG 270

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score =  133 bits (337), Expect = 5e-38
 Identities = 48/226 (21%), Positives = 87/226 (38%), Gaps = 22/226 (9%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
           L   VA +   G   I  + DV+ R      V    +  G +DI +  A  + +    ++
Sbjct: 59  LAETVALVEKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEV 118

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
               +  VI  +  GTF         + K           G I+ +S+ L ++A + Q  
Sbjct: 119 ESAQWDEVIGTNLTGTFNTIAAVAPGMIKRN--------YGRIVTVSSMLGHSANFAQAS 170

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI-----KDTAGVSKLAPEEIRSKATD 182
             ++K  V  +T+  A +    Y I VN +APG I      +      + P+  +    D
Sbjct: 171 YVSSKWGVIGLTKCAAHDLVG-YGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKD 229

Query: 183 YMAAY--------KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             + +         F +  ++  A L+L  +A  ++ G  L +D G
Sbjct: 230 VESVFASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAG 275

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  132 bits (335), Expect = 5e-38
 Identities = 59/224 (26%), Positives = 88/224 (39%), Gaps = 19/224 (8%)

Query: 2   GRRKTVLRSAVAALHSLGIP-AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
           GR    + + VA L  LG    IG++ DV  R     +    +  FG +D++   A    
Sbjct: 41  GRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFP 100

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
             P   ++P     +  ++  GTF      L  L   G G+        ++  S+    T
Sbjct: 101 DAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGR--------VVLTSSI---T 149

Query: 121 ATWY----QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI 176
                     H  A KAA     R+ A+E    + I VN I PG I  T G+ +   EE 
Sbjct: 150 GPITGYPGWSHYGATKAAQLGFMRTAAIELAP-HKITVNAIMPGNI-MTEGLLEN-GEEY 206

Query: 177 RSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            +     + A   G   DI   A +LA+    Y+ G  + VDGG
Sbjct: 207 IASMARSIPAGALGTPEDIGHLAAFLATKEAGYITGQAIAVDGG 250

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  131 bits (331), Expect = 3e-37
 Identities = 54/213 (25%), Positives = 88/213 (41%), Gaps = 21/213 (9%)

Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 78
               +    D+ K  +   ++    + FG  DILVN A   F+   ED     +  +I +
Sbjct: 75  SGTVLHHPADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAV 134

Query: 79  DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSI 138
           +   +F     A+  +KK G         G IINI++     A+ ++    AAK  +  +
Sbjct: 135 NLSSSFHTIRGAIPPMKKKG--------WGRIINIASAHGLVASPFKSAYVAAKHGIMGL 186

Query: 139 TRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK---------- 188
           T+++ALE      + VN I PG +  T  V K  P++ R++                   
Sbjct: 187 TKTVALEVAE-SGVTVNSICPGYV-LTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTK 244

Query: 189 -FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            F     +A  ALYLA D    + G  + +DGG
Sbjct: 245 KFITVEQVASLALYLAGDDAAQITGTHVSMDGG 277

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  130 bits (329), Expect = 4e-37
 Identities = 54/220 (24%), Positives = 90/220 (40%), Gaps = 19/220 (8%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
                   G+  +    D+ K E    +V++ +   G++DILVN A        ED    
Sbjct: 46  RAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTE 105

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            +  ++ ++    F     AL ++KK G G+        IINI++     A+  +    A
Sbjct: 106 KWDAILALNLSAVFHGTAAALPHMKKQGFGR--------IINIASAHGLVASANKSAYVA 157

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK---------DTAGVSKLAPEEIRSKA- 180
           AK  V   T+  ALE      I  N I PG ++           A  + +  E    +  
Sbjct: 158 AKHGVVGFTKVTALETAG-QGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELL 216

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           ++   + +F     +   A++LASDA   + G T+ VDGG
Sbjct: 217 SEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG 256

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score =  129 bits (326), Expect = 7e-37
 Identities = 34/202 (16%), Positives = 61/202 (30%), Gaps = 22/202 (10%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV-PAEDLSPNGFRTVIEIDS 80
            + +     ++ D V      +    K+D ++  A G                 + +   
Sbjct: 50  IVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSI 109

Query: 81  VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITR 140
             + I  H A K+LK+GG           +    A      T   I    AK AV  + +
Sbjct: 110 WTSTISSHLATKHLKEGGL----------LTLAGAKAALDGTPGMIGYGMAKGAVHQLCQ 159

Query: 141 SLALEW-GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 199
           SLA +  G         + P  + DT    K  PE   S          +     +    
Sbjct: 160 SLAGKNSGMPSGAAAIAVLPVTL-DTPMNRKSMPEADFS---------SWTPLEFLVETF 209

Query: 200 LYLASDAGKYVNGNTLIVDGGN 221
               +   +  +G+ + V   +
Sbjct: 210 HDWITGNKRPNSGSLIQVVTTD 231

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  129 bits (327), Expect = 8e-37
 Identities = 44/216 (20%), Positives = 81/216 (37%), Gaps = 17/216 (7%)

Query: 13  AALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGF 72
            A      P      DV       +V +  +    +LD LVNAA    +   + LS   +
Sbjct: 39  QAFTQEQYPFATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDW 98

Query: 73  RTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAK 132
           +    ++  G F +  + +   ++          GG I+ +++   +T         A+K
Sbjct: 99  QQTFAVNVGGAFNLFQQTMNQFRRQR--------GGAIVTVASDAAHTPRIGMSAYGASK 150

Query: 133 AAVDSITRSLALEWGTDYAIRVNGIAPGPIK--------DTAGVSKLAPEEIRSKATDYM 184
           AA+ S+  S+ LE      +R N ++PG            +    +        +    +
Sbjct: 151 AALKSLALSVGLELAG-SGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGI 209

Query: 185 AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
              K     +IA   L+LASD   ++    ++VDGG
Sbjct: 210 PLGKIARPQEIANTILFLASDLASHITLQDIVVDGG 245

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  129 bits (327), Expect = 8e-37
 Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 18/206 (8%)

Query: 17  SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVI 76
           S       + GD+ K E A R+V   I  FG++D LVN A      P  +++   +   +
Sbjct: 65  SADPDIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNL 124

Query: 77  EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV--SAAKAA 134
            ++  G F +   A   + K G         G I++I+ +L             S  K  
Sbjct: 125 GVNVAGFFHITQRAAAEMLKQG--------SGHIVSITTSLVDQPMVGMPSALASLTKGG 176

Query: 135 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 194
           ++++TRSLA+E+     +RVN ++PG I  T     + P E  S         + GE  D
Sbjct: 177 LNAVTRSLAMEFS-RSGVRVNAVSPGVI-KTP----MHPAETHSTLAGLHPVGRMGEIRD 230

Query: 195 IAMAALYLASDAGKYVNGNTLIVDGG 220
           +  A LYL  +   ++ G  L VDGG
Sbjct: 231 VVDAVLYL--EHAGFITGEILHVDGG 254

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  129 bits (327), Expect = 9e-37
 Identities = 51/225 (22%), Positives = 86/225 (38%), Gaps = 21/225 (9%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG---- 58
              T + +       +      ++ DV K+ED  ++VE  ++HFGK+D L+N A      
Sbjct: 40  SDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFE 99

Query: 59  -NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT- 116
              LV   D   + +  +I+ +    F +    +  ++K   G+        IIN     
Sbjct: 100 RKKLV---DYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGR--------IINYGFQG 148

Query: 117 -LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE 175
                   Y+   +AAK  + S+T+++A E    Y I  N + PG I           +E
Sbjct: 149 ADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAE-YGITANMVCPGDI-IGEMKEAT-IQE 205

Query: 176 IRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            R          + G   DIA    +L  D    + G  + V G 
Sbjct: 206 ARQLKEHNTPIGRSGTGEDIARTISFLCEDDSDMITGTIIEVTGA 250

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  129 bits (326), Expect = 2e-36
 Identities = 54/224 (24%), Positives = 89/224 (39%), Gaps = 30/224 (13%)

Query: 9   RSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAED 66
               AALH        + ++ DV  ++         ++HFG+LDILVN A    +   ++
Sbjct: 45  VQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAG---VNNEKN 101

Query: 67  LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 126
                +   ++I+ V      +  L Y+ K   G      GGIIIN+S+         Q 
Sbjct: 102 -----WEKTLQINLVSVISGTYLGLDYMSKQNGG-----EGGIIINMSSLAGLMPVAQQP 151

Query: 127 HVSAAKAAVDSITRSLALEWGTDYA---IRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY 183
              A+K  +   TRS AL    +     +R+N I PG + +TA +  +  EE   +  +Y
Sbjct: 152 VYCASKHGIVGFTRSAALA--ANLMNSGVRLNAICPGFV-NTAILESIEKEENMGQYIEY 208

Query: 184 MAAYK-------FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
               K         +   IA   + L  D    +NG  + +   
Sbjct: 209 KDHIKDMIKYYGILDPPLIANGLITLIED--DALNGAIMKITTS 250

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  127 bits (322), Expect = 2e-36
 Identities = 40/221 (18%), Positives = 78/221 (35%), Gaps = 25/221 (11%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
           MGRR   L+     L   G   IG+  D+   ED      + +   G  +++++ A    
Sbjct: 33  MGRRYQRLQQQELLL---GNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGE 89

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
             P    +    R V+E + V T ++  + ++ + +          GG++ N+ ++    
Sbjct: 90  FGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGER---------GGVLANVLSSAAQV 140

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
               +    A+K  +     SL  E   D  +R+  + P  I  +         E     
Sbjct: 141 GKANESLYCASKWGMRGFLESLRAELK-DSPLRLVNLYPSGI-RS---------EFWDNT 189

Query: 181 TDYMAAYKFGEKWDIAMAALY-LASDAGKYVNGNTLIVDGG 220
                +  F    D A   L  L + +  +V    +  + G
Sbjct: 190 DHVDPS-GFMTPEDAAAYMLDALEARSSCHVTDLFIGRNEG 229

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  128 bits (323), Expect = 3e-36
 Identities = 49/232 (21%), Positives = 85/232 (36%), Gaps = 23/232 (9%)

Query: 1   MGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG 58
             R +  L +A + + SL  G     + GD+R+  D  R+ E      G  DILV +  G
Sbjct: 37  FSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFE-KARDLGGADILVYSTGG 95

Query: 59  NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 118
                  +L    +     + +     +   A + + + G         G ++ I +   
Sbjct: 96  PRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG--------WGRMVYIGSVTL 147

Query: 119 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA------ 172
                     +  +  V  + R+LALE      + VN + P  I  T  V  LA      
Sbjct: 148 LRPWQDLALSNIMRLPVIGVVRTLALELAPH-GVTVNAVLPSLI-LTDRVRSLAEERARR 205

Query: 173 ----PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                EE        +   + G+  ++A    +LAS+   ++ G  + VDGG
Sbjct: 206 SGITVEEALKSMASRIPMGRVGKPEELASVVAFLASEKASFITGAVIPVDGG 257

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  128 bits (324), Expect = 3e-36
 Identities = 50/235 (21%), Positives = 88/235 (37%), Gaps = 30/235 (12%)

Query: 2   GRRKTVLRSAVAALHSLGIPAI--GLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN 59
           GRR+  +   +  + +    AI   +  D+   +    V+E     + K+DIL+N     
Sbjct: 41  GRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE----KYPKVDILINNLGIF 96

Query: 60  FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 119
             V   D+    +  + E++ +    +    LK + +   G+        +I I++    
Sbjct: 97  EPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGR--------VIFIASEAAI 148

Query: 120 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 179
             +    H SA K    S++RSLA        + VN I PG    T GV  +      ++
Sbjct: 149 MPSQEMAHYSATKTMQLSLSRSLAELTTG-TNVTVNTIMPGST-LTEGVETMLNSLYPNE 206

Query: 180 ATDYMAAYK--------------FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                 A K                   +IA    +L+S     +NG+ L +DGG
Sbjct: 207 QLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDGG 261

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  128 bits (324), Expect = 5e-36
 Identities = 60/228 (26%), Positives = 87/228 (38%), Gaps = 27/228 (11%)

Query: 2   GRRKTVLRSAVAAL-HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG-- 58
            R    L S  A L        IG+  DV           + ++ FG LD++   A G  
Sbjct: 72  ARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANA-GIF 130

Query: 59  --NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 116
               L     ++P     V++++  GT       L  L   GRG+        +I  S+ 
Sbjct: 131 PEARLD---TMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGR--------VILTSSI 179

Query: 117 LHYTATWY----QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA 172
              T          H  A+KAA     R+ A+E      + VN I PG I  T G+  + 
Sbjct: 180 ---TGPVTGYPGWSHYGASKAAQLGFMRTAAIELAP-RGVTVNAILPGNI-LTEGLVDM- 233

Query: 173 PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            EE  S     +     G   DI   A +LA+D   Y+ G  ++VDGG
Sbjct: 234 GEEYISGMARSIPMGMLGSPVDIGHLAAFLATDEAGYITGQAIVVDGG 281

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  128 bits (323), Expect = 6e-36
 Identities = 53/232 (22%), Positives = 89/232 (38%), Gaps = 24/232 (10%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R    + +AV  L + G    G   DV   ++    V + +  FG + ILVN+A  N  
Sbjct: 55  ARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGG 114

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL----KKGGRGQASSSSGGIIINISATL 117
               DL    +  V++ +  G F +  E L+         GR          I+NI++T 
Sbjct: 115 GETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGR----------IVNIASTG 164

Query: 118 HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI---------KDTAGV 168
                 Y    +A+K  V   T+S+  E      I VN + PG +         +  A  
Sbjct: 165 GKQGVMYAAPYTASKHGVVGFTKSVGFELAK-TGITVNAVCPGYVETPMAERVREGYARH 223

Query: 169 SKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             +  +E+  +    +   ++    ++A    YL +DA   +    L V GG
Sbjct: 224 WGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLVTDAAASITAQALNVCGG 275

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score =  127 bits (322), Expect = 9e-36
 Identities = 39/235 (16%), Positives = 79/235 (33%), Gaps = 22/235 (9%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVN------ 54
                  +++ ++ + +  +        V        +V +   H+G+ D+LVN      
Sbjct: 58  RPNSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFY 117

Query: 55  --------AAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSS 106
                          V   +        +   +++  + +       +           +
Sbjct: 118 PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAG--TPAKHRGT 175

Query: 107 GGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 166
              IIN+   +           + AK A++ +TRS ALE      IRVNG+ PG      
Sbjct: 176 NYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELA-PLQIRVNGVGPGLSVLVD 234

Query: 167 GVSKLAPEEIRSKATDYMAAYK-FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            +    P  +       +  Y+      +++   ++L S   KY+ G  + VDGG
Sbjct: 235 DM----PPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGG 285

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  127 bits (322), Expect = 9e-36
 Identities = 48/219 (21%), Positives = 84/219 (38%), Gaps = 22/219 (10%)

Query: 17  SLGIPAIGLEGDVRKRE----DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS---- 68
                A+  + D+            ++ S    FG+ D+LVN A+  +  P         
Sbjct: 71  ERSNTAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDN 130

Query: 69  ------PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 122
                       +I  +++  F++     +  K        +SS   I+N+   +     
Sbjct: 131 SNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKG--TNPNCTSSNLSIVNLCDAMVDQPC 188

Query: 123 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD 182
                 +  K A+  +T+S ALE    Y IRVNG+APG       +     EE + K   
Sbjct: 189 MAFSLYNMGKHALVGLTQSAALELA-PYGIRVNGVAPGVSLLPVAM----GEEEKDKWRR 243

Query: 183 YMAAYKF-GEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            +   +       IA A ++L S + +Y+ G+ + VDGG
Sbjct: 244 KVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGG 282

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score =  128 bits (323), Expect = 2e-35
 Identities = 40/235 (17%), Positives = 80/235 (34%), Gaps = 22/235 (9%)

Query: 1   MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA---- 56
                  +++ ++ + +  +        V        +V +   H+G+ D+LVN A    
Sbjct: 95  RPNSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFY 154

Query: 57  ----------AGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSS 106
                          V   +        +   +++  + +       +           +
Sbjct: 155 PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAG--TPAKHRGT 212

Query: 107 GGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 166
              IIN+   +           + AK A++ +TRS ALE      IRVNG+ PG      
Sbjct: 213 NYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELA-PLQIRVNGVGPGLSVLVD 271

Query: 167 GVSKLAPEEIRSKATDYMAAYK-FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            +    P  +       +  Y+      +++   ++L S   KY+ G  + VDGG
Sbjct: 272 DM----PPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGG 322

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  126 bits (319), Expect = 2e-35
 Identities = 55/235 (23%), Positives = 96/235 (40%), Gaps = 30/235 (12%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA---AG 58
            R +  LR+ +  L   G+ A G   DVR   +   +V + +  +G +D+LVN A    G
Sbjct: 53  ARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGG 112

Query: 59  NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL----KKGGRGQASSSSGGIIINIS 114
                  +L+   +  V+E +  G F +  + LK      +  GR          I+NI+
Sbjct: 113 GATA---ELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGR----------IVNIA 159

Query: 115 ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI---------KDT 165
           +T       +    SA+K  V   T++L LE      I VN + PG +         +  
Sbjct: 160 STGGKQGVVHAAPYSASKHGVVGFTKALGLELAR-TGITVNAVCPGFVETPMAASVREHY 218

Query: 166 AGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           + + +++ EE   + T  +   ++ +  ++A    YL       V    L V GG
Sbjct: 219 SDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG 273

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  124 bits (314), Expect = 8e-35
 Identities = 45/216 (20%), Positives = 79/216 (36%), Gaps = 20/216 (9%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNF 60
            R    LR+    + + G  A     D+   +         +   G+ D+LV NA  G F
Sbjct: 60  ARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWF 119

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
             P   + P  +  +I ++    +++       +    RG         IINIS+     
Sbjct: 120 GGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGH--------IINISSLAGKN 171

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
                   +A+K  ++ +  S A E    + +RV+ +APG +  T     L+ ++    A
Sbjct: 172 PVADGAAYTASKWGLNGLMTSAAEELRQ-HQVRVSLVAPGSV-RTEFGVGLSAKKSALGA 229

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLI 216
                     E  DIA     LA+ A +      L+
Sbjct: 230 ---------IEPDDIADVVALLATQADQSFISEVLV 256

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score =  121 bits (305), Expect = 1e-33
 Identities = 57/224 (25%), Positives = 103/224 (45%), Gaps = 23/224 (10%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG---- 58
              T L +      + GI  +  +GDV+  ED   +V++ ++ FG++DILVN A G    
Sbjct: 38  PASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNA-GITRD 96

Query: 59  NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL--KKGGRGQASSSSGGIIINISAT 116
             ++    +S   +  V+  +    ++      K +  +K G+          IINI++ 
Sbjct: 97  TLML---KMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGK----------IINITSI 143

Query: 117 LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI 176
                   Q + +A+KA +   T+S+A E+     I  N +APG I  T     L P+++
Sbjct: 144 AGIIGNAGQANYAASKAGLIGFTKSIAKEFAA-KGIYCNAVAPGII-KTDMTDVL-PDKV 200

Query: 177 RSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           +    + +   +FG   ++A    +LASD   Y+ G  + +DGG
Sbjct: 201 KEMYLNNIPLKRFGTPEEVANVVGFLASDDSNYITGQVINIDGG 244

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score =  121 bits (305), Expect = 1e-33
 Identities = 59/225 (26%), Positives = 104/225 (46%), Gaps = 23/225 (10%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG--- 58
              K    + V  + + G+ +  ++ +V   ++   +++  ++ FG LD+LVN A G   
Sbjct: 36  AGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNA-GITR 94

Query: 59  -NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL--KKGGRGQASSSSGGIIINISA 115
            N L+    +    +  VI+ +  G F    +A   +  ++ G           IIN+S+
Sbjct: 95  DNLLM---RMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGA----------IINLSS 141

Query: 116 TLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE 175
            +       Q +  A KA V  +T+S A E  +   I VN +APG I  +     L  +E
Sbjct: 142 VVGAVGNPGQANYVATKAGVIGLTKSAARELAS-RGITVNAVAPGFI-VSDMTDAL-SDE 198

Query: 176 IRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           ++ +    +   +FG+  DIA    +LASD  KY+ G T+ V+GG
Sbjct: 199 LKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGG 243

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score =  120 bits (304), Expect = 2e-33
 Identities = 36/219 (16%), Positives = 70/219 (31%), Gaps = 20/219 (9%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVV-----ESTINHFGKLDILVNAAAGNFLVPA- 64
             A L + G     +   + +    +  +              L + VN    + L+   
Sbjct: 38  IEADLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGL 97

Query: 65  -EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 123
            E LS       + + S+         L  ++            G               
Sbjct: 98  AEALSRGQQPAAVIVGSIAATQPGAAELPMVEAML--------AGDEARAIELAEQQG-Q 148

Query: 124 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKAT 181
             +  + +K AV  + R   ++W     +R+N +APG + +T  +      P    S   
Sbjct: 149 THLAYAGSKYAVTCLARRNVVDWA-GRGVRLNVVAPGAV-ETPLLQASKADPRYGESTRR 206

Query: 182 DYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                 +  E  ++A A  +L      +++G+ L VDGG
Sbjct: 207 FVAPLGRGSEPREVAEAIAFLLGPQASFIHGSVLFVDGG 245

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score =  120 bits (303), Expect = 2e-33
 Identities = 74/225 (32%), Positives = 109/225 (48%), Gaps = 23/225 (10%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG--- 58
              +      V  +  LG  AI +  DV   ED   +V+ T++ FG++DILVN A G   
Sbjct: 36  AGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNA-GVTK 94

Query: 59  -NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL--KKGGRGQASSSSGGIIINISA 115
            N L+    +    + TVI  +  G F+      +++  ++ GR          I+NI++
Sbjct: 95  DNLLM---RMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGR----------IVNIAS 141

Query: 116 TLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE 175
            +  T    Q +  AAKA V  +T++ A E  +   I VN IAPG I  T     L  E 
Sbjct: 142 VVGVTGNPGQANYVAAKAGVIGLTKTSAKELAS-RNITVNAIAPGFI-ATDMTDVL-DEN 198

Query: 176 IRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           I+++    + A +FGE  DIA A  + ASD  KY+ G TL VDGG
Sbjct: 199 IKAEMLKLIPAAQFGEAQDIANAVTFFASDQSKYITGQTLNVDGG 243

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  121 bits (306), Expect = 2e-33
 Identities = 65/225 (28%), Positives = 102/225 (45%), Gaps = 23/225 (10%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG--- 58
            R +    S V  + S G  + G  GDV K+E+   V+   +     +DILVN A G   
Sbjct: 75  SRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNA-GITR 133

Query: 59  -NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL--KKGGRGQASSSSGGIIINISA 115
            N  +    +  + +  V+  +    F +     K +   + GR          IINIS+
Sbjct: 134 DNLFL---RMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGR----------IINISS 180

Query: 116 TLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE 175
            +  T    Q + S++KA V   T+SLA E  +   I VN IAPG I  +    K+  E+
Sbjct: 181 IVGLTGNVGQANYSSSKAGVIGFTKSLAKELAS-RNITVNAIAPGFI-SSDMTDKI-SEQ 237

Query: 176 IRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           I+      + A + G   ++A  A +L+SD   Y+NG   ++DGG
Sbjct: 238 IKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGG 282

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score =  121 bits (305), Expect = 2e-33
 Identities = 66/225 (29%), Positives = 102/225 (45%), Gaps = 23/225 (10%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG--- 58
              +       AA    G+   G   +V        +VEST+  FG L++LVN A G   
Sbjct: 59  ATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNA-GITQ 117

Query: 59  -NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL--KKGGRGQASSSSGGIIINISA 115
               +    +  + +  VI+ +    F +    L+ +   +GGR          I+NI++
Sbjct: 118 DQLAM---RMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGR----------IVNITS 164

Query: 116 TLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE 175
            +       Q++ +AAKA V  +TR+LA E G+   I VN +APG I DT     L P+E
Sbjct: 165 VVGSAGNPGQVNYAAAKAGVAGMTRALAREIGS-RGITVNCVAPGFI-DTDMTKGL-PQE 221

Query: 176 IRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            ++     +   + G   DIA A  +LAS    Y+ G TL V+GG
Sbjct: 222 QQTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGTTLHVNGG 266

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  120 bits (302), Expect = 4e-33
 Identities = 40/204 (19%), Positives = 68/204 (33%), Gaps = 20/204 (9%)

Query: 19  GIPAIGLEGDV-RKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIE 77
            +       DV     ++ ++++   +    +DIL+N A    ++             I 
Sbjct: 54  KVNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAG---ILDDHQ-----IERTIA 105

Query: 78  IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDS 137
           I+  G        L +  K   G      GGII NI +   + A       SA+KAAV S
Sbjct: 106 INFTGLVNTTTAILDFWDKRKGG-----PGGIIANICSVTGFNAIHQVPVYSASKAAVVS 160

Query: 138 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIA 196
            T SLA        +    I PG    T  V    +  ++  +  + + ++         
Sbjct: 161 FTNSLAKLAPI-TGVTAYSINPGIT-RTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCG 218

Query: 197 MAALYLASDAGKYVNGNTLIVDGG 220
              +          NG    +D G
Sbjct: 219 QNFVKAIEAN---KNGAIWKLDLG 239

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  119 bits (300), Expect = 6e-33
 Identities = 35/204 (17%), Positives = 66/204 (32%), Gaps = 12/204 (5%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R    L   VA + + G   +    D R  ++    +    +    L++ +     N  
Sbjct: 38  RRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLN-AADAHAPLEVTIFNVGANVN 96

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            P  + +   FR V E+     F+   E+ + +   G+G+        I    AT     
Sbjct: 97  FPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGK--------IFFTGATASLRG 148

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
                  ++AK  + ++ +S+A E         + I    + DTA V +   +     A 
Sbjct: 149 GSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGV-DTAWVRERREQMFGKDAL 207

Query: 182 DYMAAYKFGEKWDIAMAALYLASD 205
                        +A A   L   
Sbjct: 208 ANPD--LLMPPAAVAGAYWQLYQQ 229

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score =  119 bits (300), Expect = 6e-33
 Identities = 64/225 (28%), Positives = 99/225 (44%), Gaps = 23/225 (10%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG--- 58
              +        ++   G  A GL  ++   E               +DILVN A G   
Sbjct: 36  ATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAIDILVNNA-GITR 94

Query: 59  -NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL--KKGGRGQASSSSGGIIINISA 115
            N ++    +S + +++VI  +    F M  E ++ +  K+ GR          II+I +
Sbjct: 95  DNLMM---RMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGR----------IISIGS 141

Query: 116 TLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE 175
            +       Q +  AAKA V   ++SLA E  +   I VN +APG I  T    KL  +E
Sbjct: 142 VVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVAS-RNITVNVVAPGFI-ATDMTDKL-TDE 198

Query: 176 IRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            +S     + + + GE  DIA A  +LAS+  KY+ G TL V+GG
Sbjct: 199 QKSFIATKIPSGQIGEPKDIAAAVAFLASEEAKYITGQTLHVNGG 243

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score =  117 bits (294), Expect = 4e-32
 Identities = 42/205 (20%), Positives = 67/205 (32%), Gaps = 25/205 (12%)

Query: 22  AIGLEGDVRKREDAVRVVESTIN--HFGKLDILVNAAAGNFLVPA-EDLSPNGFRTVIEI 78
            I ++G+    E    ++E T +     ++D +   A G     A           +I+ 
Sbjct: 44  NILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQ 103

Query: 79  DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSI 138
               + I    A  +LK GG           +    A      T   I    AKAAV  +
Sbjct: 104 SVWSSAIAAKLATTHLKPGGL----------LQLTGAAAAMGPTPSMIGYGMAKAAVHHL 153

Query: 139 TRSLALEW-GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 197
           T SLA +  G      V  I P  + DT    K  P    S          +     I+ 
Sbjct: 154 TSSLAAKDSGLPDNSAVLTIMPVTL-DTPMNRKWMPNADHS---------SWTPLSFISE 203

Query: 198 AALYLASD-AGKYVNGNTLIVDGGN 221
             L   ++ + +  +G  L +   N
Sbjct: 204 HLLKWTTETSSRPSSGALLKITTEN 228

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score =  116 bits (294), Expect = 5e-32
 Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 40/227 (17%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLV- 62
           +        +  + A  +  DV       R     + H G+LD +V+ A G    NF   
Sbjct: 37  IEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYA-GITRDNFHWK 95

Query: 63  -PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH--- 118
            P ED     +  V+ ++  G+F++   A + +++   G         I+  ++ ++   
Sbjct: 96  MPLED-----WELVLRVNLTGSFLVAKAASEAMREKNPGS--------IVLTASRVYLGN 142

Query: 119 -----YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP 173
                Y         +A+ A V  +TR+LALE G  + IRVN +APG I +T   +K+ P
Sbjct: 143 LGQANY---------AASMAGVVGLTRTLALELGR-WGIRVNTLAPGFI-ETRMTAKV-P 190

Query: 174 EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           E++R KA       + G+  ++A AAL+L SD   ++ G  L VDGG
Sbjct: 191 EKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQVLFVDGG 237

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score =  116 bits (294), Expect = 7e-32
 Identities = 49/215 (22%), Positives = 87/215 (40%), Gaps = 23/215 (10%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDL 67
           +    +LG      EG+V   +   +  +      G++D+LVN A G            +
Sbjct: 55  LEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNA-GITRDVVFR---KM 110

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQ 125
           +   ++ VI+ +    F +  + +  +  +  GR          IINIS+       + Q
Sbjct: 111 TREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGR----------IINISSVNGQKGQFGQ 160

Query: 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA 185
            + S AKA +   T SLA E  T   + VN ++PG I  T  V  +   ++  K    + 
Sbjct: 161 TNYSTAKAGIHGFTMSLAQEVAT-KGVTVNTVSPGYI-GTDMVKAI-RPDVLEKIVATIP 217

Query: 186 AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             + G   +I     +LAS+   +  G    ++GG
Sbjct: 218 VRRLGSPDEIGSIVAWLASEESGFSTGADFSLNGG 252

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  116 bits (294), Expect = 7e-32
 Identities = 42/230 (18%), Positives = 77/230 (33%), Gaps = 26/230 (11%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST-INHFGKLDILVNAAAGNF 60
           GR    LR       SLG   + +  D  +  +   + E       G+LD+LVN A    
Sbjct: 36  GRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGV 95

Query: 61  LV-------PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI 113
                       +   + +  +  +   G +       + +   G         G+I+ I
Sbjct: 96  QTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAG--------QGLIVVI 147

Query: 114 S--ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL 171
           S   +L Y    + +     KAA D +    A E    + +    + PG ++       +
Sbjct: 148 SSPGSLQYM---FNVPYGVGKAACDKLAADCAHELR-RHGVSCVSLWPGIVQTELLKEHM 203

Query: 172 APEEIRSKAT--DYMAAYKFGEK-WDIAMAALYLASDAGK-YVNGNTLIV 217
           A EE+        + +A+   E         + LA+D     ++G  L  
Sbjct: 204 AKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALATDPNILSLSGKVLPS 253

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  116 bits (292), Expect = 8e-32
 Identities = 34/215 (15%), Positives = 68/215 (31%), Gaps = 20/215 (9%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R    L        + G     +  D+    D  R+    +  +G +D LVN A     
Sbjct: 40  SRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRF 99

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
               DL+   F   +  +  GTF +       +++   G         I  I++     A
Sbjct: 100 GALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGH--------IFFITSVAATKA 151

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
             +      +K     +  ++ L       +R+  + PG +  T    K+  +E+++   
Sbjct: 152 FRHSSIYCMSKFGQRGLVETMRLYAR-KCNVRITDVQPGAV-YTPMWGKV-DDEMQALM- 207

Query: 182 DYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLI 216
                       DIA   +       + V    ++
Sbjct: 208 --------MMPEDIAAPVVQAYLQPSRTVVEEIIL 234

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score =  116 bits (292), Expect = 1e-31
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 23/217 (10%)

Query: 10  SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAE 65
            A A    LG    G+  +V   E    V+++  + FG +DILVN A G    N L+   
Sbjct: 45  GAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNA-GITRDNLLM--- 100

Query: 66  DLSPNGFRTVIEIDSVGTFIMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATW 123
            +    +  ++E +    F +    L+ +  K+ GR          IIN+ + +      
Sbjct: 101 RMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGR----------IINVGSVVGTMGNA 150

Query: 124 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY 183
            Q + +AAKA V   T+S+A E  +   + VN +APG I +T     L  +E R+     
Sbjct: 151 GQANYAAAKAGVIGFTKSMAREVAS-RGVTVNTVAPGFI-ETDMTKAL-NDEQRTATLAQ 207

Query: 184 MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           + A + G+  +IA A  +LAS    Y+ G TL V+GG
Sbjct: 208 VPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGG 244

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score =  116 bits (293), Expect = 1e-31
 Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 19/218 (8%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK-LDILVNAAAG----NFLV 62
           L    +            + DV +   A  ++E     F +   ++V+ A G     FL+
Sbjct: 51  LGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCA-GITQDEFLL 109

Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 122
               +S + +  VI ++  GTF++   A + L   G         G IINIS+ +     
Sbjct: 110 ---HMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCR-------GSIINISSIVGKVGN 159

Query: 123 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD 182
             Q + +A+KA V  +T++ A E G  + IR N + PG I  T    K+ P+++  K T+
Sbjct: 160 VGQTNYAASKAGVIGLTQTAARELGR-HGIRCNSVLPGFI-ATPMTQKV-PQKVVDKITE 216

Query: 183 YMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            +     G+  D+A    +LAS+   Y+ G ++ V GG
Sbjct: 217 MIPMGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGG 254

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score =  115 bits (291), Expect = 1e-31
 Identities = 60/216 (27%), Positives = 104/216 (48%), Gaps = 23/216 (10%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAED 66
           A    +  G+ A G+E ++   E   +  E   N    +DILVN A G       +    
Sbjct: 48  AEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNA-GITRDKLFL---R 103

Query: 67  LSPNGFRTVIEIDSVGTFIMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWY 124
           +S   +  V++++  GTF++   +L+ +  ++ GR          I+NIS+ + +T    
Sbjct: 104 MSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGR----------IVNISSVVGFTGNVG 153

Query: 125 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM 184
           Q++ S  KA +   T+SLA E      + VN +APG I +T   + L  EEI+ K  + +
Sbjct: 154 QVNYSTTKAGLIGFTKSLAKELAP-RNVLVNAVAPGFI-ETDMTAVL-SEEIKQKYKEQI 210

Query: 185 AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
              +FG   ++A   L+L S+   Y+ G  + V+GG
Sbjct: 211 PLGRFGSPEEVANVVLFLCSELASYITGEVIHVNGG 246

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score =  114 bits (289), Expect = 3e-31
 Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 24/226 (10%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIG-LEGDVRKREDAVRVVESTINHFGKLDILVNAAAG-- 58
           G+ +             G P +  L  ++ + E A  +V       G LD LVN A G  
Sbjct: 33  GQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGGLDTLVNNA-GIT 91

Query: 59  --NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL--KKGGRGQASSSSGGIIINIS 114
               LV    +    +  V+E +    F    EA+K +   + GR          I+NI+
Sbjct: 92  RDTLLV---RMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGR----------IVNIT 138

Query: 115 ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE 174
           + +       Q +  A+KA +   TR++A E+     I VN +APG I +T    +L P+
Sbjct: 139 SVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQ-RGITVNAVAPGFI-ETEMTERL-PQ 195

Query: 175 EIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           E++      + A +FG   ++A A  +L S+   Y+ G TL VDGG
Sbjct: 196 EVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEKAGYITGQTLCVDGG 241

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score =  114 bits (289), Expect = 4e-31
 Identities = 55/216 (25%), Positives = 90/216 (41%), Gaps = 23/216 (10%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAED 66
                  LG        ++  R+   ++ E        +DILVN A G       V    
Sbjct: 64  LKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNA-GITRDGLFV---R 119

Query: 67  LSPNGFRTVIEIDSVGTFIMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWY 124
           +    +  V+ ++      +  E +  +  ++ GR          IINI++ +       
Sbjct: 120 MQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGR----------IINITSIVGVVGNPG 169

Query: 125 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM 184
           Q +  AAKA +   +++LA E  +   I VN IAPG I  +A   KL  E+ +      +
Sbjct: 170 QTNYCAAKAGLIGFSKALAQEIAS-RNITVNCIAPGFI-KSAMTDKL-NEKQKEAIMAMI 226

Query: 185 AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
              + G   +IA A +YLASD   Y+ G TL ++GG
Sbjct: 227 PMKRMGIGEEIAFATVYLASDEAAYLTGQTLHINGG 262

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score =  114 bits (288), Expect = 4e-31
 Identities = 59/225 (26%), Positives = 102/225 (45%), Gaps = 24/225 (10%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG---- 58
           R           + + G  AI   GDV K  D   ++++ I+ +G +D++VN  AG    
Sbjct: 34  RSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVN-NAGITRD 92

Query: 59  NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL--KKGGRGQASSSSGGIIINISAT 116
             L+    +  + +  VI+++  G F+    A K +  K+ GR          IINI++ 
Sbjct: 93  TLLI---RMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGR----------IINIASV 139

Query: 117 LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI 176
           +       Q + +AAKA V   +++ A E  +   I VN + PG I  +   +KL  E++
Sbjct: 140 VGLIGNIGQANYAAAKAGVIGFSKTAAREGAS-RNINVNVVCPGFI-ASDMTAKL-GEDM 196

Query: 177 RSKATDYMAAYKFGEKWDIAMAALYLA-SDAGKYVNGNTLIVDGG 220
             K    +   + G+  ++A    +LA S A  Y+ G    +DGG
Sbjct: 197 EKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTIDGG 241

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score =  113 bits (284), Expect = 2e-30
 Identities = 50/215 (23%), Positives = 90/215 (41%), Gaps = 22/215 (10%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDL 67
           +      G        DV   E   R  E  +  FGK+D+L+N A G       +    +
Sbjct: 67  LMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGKVDVLINNA-GITRDATFM---KM 122

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQ 125
           +   +  V+  D    F +  + +  +  ++ GR          I+NI +       + Q
Sbjct: 123 TKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGR----------IVNIGSVNGSRGAFGQ 172

Query: 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA 185
            + ++AKA +   T++LALE      I VN ++PG +  TA V  +  + + +K    + 
Sbjct: 173 ANYASAKAGIHGFTKTLALETAK-RGITVNTVSPGYL-ATAMVEAVPQDVLEAKILPQIP 230

Query: 186 AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             + G   ++A    +L SD   +V G  L ++GG
Sbjct: 231 VGRLGRPDEVAALIAFLCSDDAGFVTGADLAINGG 265

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score =  112 bits (283), Expect = 2e-30
 Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 23/205 (11%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIE 77
             G+E DV   +   R   +   H G +++LV+ A G     FL+    ++   F  VI 
Sbjct: 55  LFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNA-GLSADAFLM---RMTEEKFEKVIN 110

Query: 78  IDSVGTFIMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 135
            +  G F +   A + +   K GR          +I I +         Q + +A+KA V
Sbjct: 111 ANLTGAFRVAQRASRSMQRNKFGR----------MIFIGSVSGLWGIGNQANYAASKAGV 160

Query: 136 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 195
             + RS+A E      +  N +APG I DT     L  E I+  A  ++ A + G   ++
Sbjct: 161 IGMARSIARELSK-ANVTANVVAPGYI-DTDMTRAL-DERIQQGALQFIPAKRVGTPAEV 217

Query: 196 AMAALYLASDAGKYVNGNTLIVDGG 220
           A    +LAS+   Y++G  + VDGG
Sbjct: 218 AGVVSFLASEDASYISGAVIPVDGG 242

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score =  112 bits (283), Expect = 3e-30
 Identities = 43/187 (22%), Positives = 83/187 (44%), Gaps = 10/187 (5%)

Query: 34  DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 93
           D  + ++       ++DILV  A G      ++L+   F+  I+   +    +    L  
Sbjct: 67  DLRKDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPA 126

Query: 94  LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIR 153
           +K+ G G+        I+ I++    +        ++A+ A+    ++L+ E    Y I 
Sbjct: 127 MKEKGWGR--------IVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAP-YGIT 177

Query: 154 VNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGN 213
           VN +APG   +T  V +L  EE + +    +   +  +  +IA    +L S+   Y+ G 
Sbjct: 178 VNCVAPGWT-ETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQ 236

Query: 214 TLIVDGG 220
           T++VDGG
Sbjct: 237 TIVVDGG 243

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score =  113 bits (284), Expect = 3e-30
 Identities = 47/215 (21%), Positives = 83/215 (38%), Gaps = 13/215 (6%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA--AGNFLVPAEDLS 68
           A+A    LG  A  +  +V   +  +  +E+          +V          +   D S
Sbjct: 69  ALAD--ELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGS 126

Query: 69  P---NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 125
           P    GF   I++   GT+ +       +         +   G ++  ++   Y     Q
Sbjct: 127 PADMGGFTKTIDLYLNGTYNVARLVAASIAA--AEPRENGERGALVLTASIAGYEGQIGQ 184

Query: 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA 185
              +AAKA V  +T + A +      IRVN IAPG +  T  +  +  E +   A +   
Sbjct: 185 TAYAAAKAGVIGLTIAAARDLS-SAGIRVNTIAPGTM-KTPIMESVGEEALAKFAANIPF 242

Query: 186 AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             + G   + A AA +L ++   Y+NG  + +DG 
Sbjct: 243 PKRLGTPDEFADAAAFLLTNG--YINGEVMRLDGA 275

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score =  112 bits (282), Expect = 4e-30
 Identities = 62/226 (27%), Positives = 110/226 (48%), Gaps = 27/226 (11%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG--- 58
                     VAA+ + G  A  ++ DV +  +   +  + I  +G+LD+LVN  AG   
Sbjct: 60  ASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGRLDVLVN-NAGITR 118

Query: 59  -NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL--KKGGRGQASSSSGGIIINISA 115
              L+    +  + +++V++++  G F+    A K +  ++ GR          IINI++
Sbjct: 119 DTLLL---RMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGR----------IINIAS 165

Query: 116 TLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE 175
            +       Q + SAAKA V  +T+++A E  +   I VN +APG I  T   S+LA E+
Sbjct: 166 VVGEMGNPGQANYSAAKAGVIGLTKTVAKELAS-RGITVNAVAPGFI-ATDMTSELAAEK 223

Query: 176 IRSKATDYMAAYKFGEKWDIAMAALYLASD-AGKYVNGNTLIVDGG 220
           +       +   ++GE  ++A    +LA+D A  Y+ G  + +DGG
Sbjct: 224 LLEV----IPLGRYGEAAEVAGVVRFLAADPAAAYITGQVINIDGG 265

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  111 bits (281), Expect = 5e-30
 Identities = 39/223 (17%), Positives = 73/223 (32%), Gaps = 24/223 (10%)

Query: 2   GRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG 58
            R K  L      +          I L  D+     A   ++     +G +DILVN AA 
Sbjct: 38  ARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYGAVDILVN-AAA 96

Query: 59  NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 118
            F+  +     + FR ++EI+ +  + +     + +K    G         I N+++   
Sbjct: 97  MFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGY--------IFNVASRAA 148

Query: 119 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS 178
                      + K A+  +  SL  E      IRV  + PG + +T         ++  
Sbjct: 149 KYGFADGGIYGSTKFALLGLAESLYRELA-PLGIRVTTLCPGWV-NT---------DMAK 197

Query: 179 KATDYMAAYKFGEKWDIAMAALYLASD-AGKYVNGNTLIVDGG 220
           KA       +  +  D+      L +      +      +   
Sbjct: 198 KAGTPFKDEEMIQPDDLLNTIRCLLNLSENVCIKDIVFEMKKS 240

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score =  111 bits (279), Expect = 8e-30
 Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 23/205 (11%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIE 77
            + ++ D+   E   +  +      G +++L+  A G      L+    +S   F +V+E
Sbjct: 61  FLAVKCDITDTEQVEQAYKEIEETHGPVEVLIANA-GVTKDQLLM---RMSEEDFTSVVE 116

Query: 78  IDSVGTFIMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 135
            +  GTF +   A + +   K GR          ++ IS+ +    +  Q + +A+KA +
Sbjct: 117 TNLTGTFRVVKRANRAMLRAKKGR----------VVLISSVVGLLGSAGQANYAASKAGL 166

Query: 136 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 195
               RSLA E G+   I  N +APG + DT     L  +E R+     +   ++    +I
Sbjct: 167 VGFARSLARELGS-RNITFNVVAPGFV-DTDMTKVL-TDEQRANIVSQVPLGRYARPEEI 223

Query: 196 AMAALYLASDAGKYVNGNTLIVDGG 220
           A    +LASD   Y+ G  + VDGG
Sbjct: 224 AATVRFLASDDASYITGAVIPVDGG 248

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score =  109 bits (274), Expect = 6e-29
 Identities = 45/236 (19%), Positives = 81/236 (34%), Gaps = 32/236 (13%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI-NHFGKLDILVNAAAGNFLVPAED 66
           L +A   +  + I    +  D+   E   + +   +      +D LV  A    L P   
Sbjct: 21  LEAAGHQIVGIDIRDAEVIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAG---LGPQTK 77

Query: 67  LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG--------------------QASSSS 106
           +       V+ ++  G   +    L  LKKG +                       +  +
Sbjct: 78  V----LGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEA 133

Query: 107 GGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 166
           G      +   H       +  + +K A+    R  A  WG +  +R+N IAPG   +T 
Sbjct: 134 GEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWG-EAGVRLNTIAPGAT-ETP 191

Query: 167 GVSK-LAPEEIRSKATDYMAAYK-FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            +   L           ++       E  ++A    +L S A  YV+G  +++DGG
Sbjct: 192 LLQAGLQDPRYGESIAKFVPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGG 247

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score =  108 bits (272), Expect = 8e-29
 Identities = 61/216 (28%), Positives = 96/216 (44%), Gaps = 27/216 (12%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAED 66
             +  ++L         ++  +E+      + I+    LDILV  A G       +    
Sbjct: 51  LKSLGNALKDNYTIEVCNLANKEE----CSNLISKTSNLDILVCNA-GITSDTLAI---R 102

Query: 67  LSPNGFRTVIEIDSVGTFIMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWY 124
           +    F  VI+I+    FI+  EA+K +  K+ GR          IINIS+ +       
Sbjct: 103 MKDQDFDKVIDINLKANFILNREAIKKMIQKRYGR----------IINISSIVGIAGNPG 152

Query: 125 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM 184
           Q +  A+KA +  +T+SL+ E  T   I VN +APG I  +    KL  E+ R      +
Sbjct: 153 QANYCASKAGLIGMTKSLSYEVAT-RGITVNAVAPGFI-KSDMTDKL-NEKQREAIVQKI 209

Query: 185 AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
               +G   D+A A  +LAS+   Y+ G TL V+GG
Sbjct: 210 PLGTYGIPEDVAYAVAFLASNNASYITGQTLHVNGG 245

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score =  106 bits (267), Expect = 6e-28
 Identities = 45/213 (21%), Positives = 83/213 (38%), Gaps = 12/213 (5%)

Query: 13  AALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA----AGNFLVPAEDLS 68
                LG        DV    DA   +      FG +  LVN A        L  +   +
Sbjct: 46  EPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHA 105

Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 128
            + F   + ++ +GTF M   A + + +      +    G+I+N ++   +     Q   
Sbjct: 106 LDSFARTVAVNLIGTFNMIRLAAEVMSQ--GEPDADGERGVIVNTASIAAFDGQIGQAAY 163

Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK 188
           +A+K  V ++T   A E    + IRV  IAPG   DT  ++ + P++++      +    
Sbjct: 164 AASKGGVAALTLPAARELA-RFGIRVVTIAPGIF-DTPMMAGM-PQDVQDALAASVPFPP 220

Query: 189 -FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             G   + A    ++  +    +NG  + +DG 
Sbjct: 221 RLGRAEEYAALVKHICENT--MLNGEVIRLDGA 251

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  106 bits (268), Expect = 8e-28
 Identities = 34/164 (20%), Positives = 59/164 (35%), Gaps = 11/164 (6%)

Query: 2   GRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
            R K  L+  V+    LG   A  + G +     A + V       G LD+L+     N 
Sbjct: 59  ARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNT 118

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
            +       +  R  +E++ +   ++   AL  LK+           G I+ +S+     
Sbjct: 119 SLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS---------NGSIVVVSSLAGKV 169

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIK 163
           A       SA+K A+D    S+  E+      + +     G I 
Sbjct: 170 AYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLID 213

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score =  104 bits (261), Expect = 1e-27
 Identities = 31/196 (15%), Positives = 62/196 (31%), Gaps = 30/196 (15%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81
           +  +  D+   +   ++ E      GK+D +V+A       P  +L+P      I     
Sbjct: 36  SGDVTVDITNIDSIKKMYE----QVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLG 91

Query: 82  GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 141
           G   +    +  L   G               +  +           + A  AV +  +S
Sbjct: 92  GQINLVLLGIDSLNDKGS----------FTLTTGIMMEDPIVQGASAAMANGAVTAFAKS 141

Query: 142 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 201
            A+E      IR+N ++P  ++++             K   +   +       +A A  +
Sbjct: 142 AAIEMPRG--IRINTVSPNVLEESW-----------DKLEPFFEGFLPVPAAKVARA--F 186

Query: 202 LASDAGKYVNGNTLIV 217
             S  G    G +  V
Sbjct: 187 EKSVFG-AQTGESYQV 201

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score =  103 bits (258), Expect = 1e-26
 Identities = 45/215 (20%), Positives = 85/215 (39%), Gaps = 14/215 (6%)

Query: 13  AALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA----AGNFLVPAED-- 66
           A    LG   +    DV   +D    +      FG++D+ VN A    A       +   
Sbjct: 51  AQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQT 110

Query: 67  LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 126
            +   F+ V++++ +GTF +       + +           G+IIN ++   +     Q 
Sbjct: 111 HTLEDFQRVLDVNLMGTFNVIRLVAGEMGQ--NEPDQGGQRGVIINTASVAAFEGQVGQA 168

Query: 127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA 186
             SA+K  +  +T  +A +      IRV  IAPG    T  ++ L PE++ +     +  
Sbjct: 169 AYSASKGGIVGMTLPIARDLA-PIGIRVMTIAPGLF-GTPLLTSL-PEKVCNFLASQVPF 225

Query: 187 YK-FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
               G+  + A     +  +   ++NG  + +DG 
Sbjct: 226 PSRLGDPAEYAHLVQAIIENP--FLNGEVIRLDGA 258

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  101 bits (254), Expect = 4e-26
 Identities = 37/228 (16%), Positives = 69/228 (30%), Gaps = 24/228 (10%)

Query: 1   MGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTIN----HFGKLDILVN 54
             R +++LR     L +    +  +    D+       R++ +          +  +L+N
Sbjct: 39  SARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLIN 98

Query: 55  AAA---GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIII 111
            AA                       ++      +    L   +              ++
Sbjct: 99  NAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSP------GLSKTVV 152

Query: 112 NISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT----AG 167
           NIS+              A KAA D + + LA E   + ++RV   APGP+ D       
Sbjct: 153 NISSLCALQPYKGWGLYCAGKAARDMLYQVLAAE---EPSVRVLSYAPGPL-DNDMQQLA 208

Query: 168 VSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTL 215
                  E+RSK     +     +    A   L L      + +G  +
Sbjct: 209 RETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGLLQKD-TFQSGAHV 255

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score =  100 bits (252), Expect = 9e-26
 Identities = 53/213 (24%), Positives = 88/213 (41%), Gaps = 11/213 (5%)

Query: 13  AALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA----AGNFLVPAEDLS 68
             +  LG  A     DV         ++      G L I+VN A    A   L      S
Sbjct: 45  DVVADLGDRARFAAADVTDEAAVASALD-LAETMGTLRIVVNCAGTGNAIRVLSRDGVFS 103

Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 128
              FR +++I+ VG+F +   A + + K      ++   G+IIN ++   +     Q   
Sbjct: 104 LAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAY 163

Query: 129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK 188
           SA+K  V  +T  +A +    + IRV  IAPG   DT  ++ L PEE R+     +    
Sbjct: 164 SASKGGVVGMTLPIARDLA-SHRIRVMTIAPGLF-DTPLLASL-PEEARASLGKQVPHPS 220

Query: 189 -FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             G   +    A+++  +    +NG  + +DG 
Sbjct: 221 RLGNPDEYGALAVHIIENP--MLNGEVIRLDGA 251

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score = 98.4 bits (246), Expect = 5e-25
 Identities = 44/185 (23%), Positives = 76/185 (41%), Gaps = 27/185 (14%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R +  L++  A L      A+ L GDVR+  D  R V +    FG+L  LVN A    +
Sbjct: 36  ARDEKRLQALAAELEG----ALPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGVM 91

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL-HYT 120
            P  +L+   +R V++ +  G F+    A+  L + G G         I+N+ +      
Sbjct: 92  KPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGT--------IVNVGSLAGKNP 143

Query: 121 ---ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI------KDTAGVSKL 171
                 Y    +A+K  +  +  +  L+   +  +RV  + PG +             KL
Sbjct: 144 FKGGAAY----NASKFGLLGLAGAAMLDLR-EANVRVVNVLPGSVDTGFAGNTPGQAWKL 198

Query: 172 APEEI 176
            PE++
Sbjct: 199 KPEDV 203

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score = 97.2 bits (243), Expect = 1e-24
 Identities = 39/207 (18%), Positives = 68/207 (32%), Gaps = 29/207 (14%)

Query: 2   GRRKTVLRSAVAAL-HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
            R    L      L    G+       DV K E      +  +  FG +D++V  A   +
Sbjct: 33  ARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGY 92

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI-SATLHY 119
               E+LS   F  +IE++ +G +      L  LK+ G        G  ++     +   
Sbjct: 93  FKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTG--------GLALVTTSDVSARL 144

Query: 120 TATW--YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR 177
                 Y     + K A  ++ R+  +E   +  +R   + PG + DT            
Sbjct: 145 IPYGGGY----VSTKWAARALVRTFQIE---NPDVRFFELRPGAV-DT---------YFG 187

Query: 178 SKATDYMAAYKFGEKWDIAMAALYLAS 204
                      + +  +IA A   L  
Sbjct: 188 GSKPGKPKEKGYLKPDEIAEAVRCLLK 214

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 96.5 bits (241), Expect = 3e-24
 Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 13/215 (6%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA----AGNFLVPAED 66
            V  L   G   I +EGDV + ED  R V         L  +V+AA    A   L     
Sbjct: 30  VVLDLRREGEDLIYVEGDVTREEDVRRAVARAQE-EAPLFAVVSAAGVGLAEKILGKEGP 88

Query: 67  LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 126
                FR V+E++ +GTF +   A   +++           G+I+N ++   +     Q 
Sbjct: 89  HGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQR--GVIVNTASVAAFEGQIGQA 146

Query: 127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA 186
             +A+K  V ++T   A E    + IRV  +APG   DT  +  L PE+ ++     +  
Sbjct: 147 AYAASKGGVVALTLPAARELA-GWGIRVVTVAPGLF-DTPLLQGL-PEKAKASLAAQVPF 203

Query: 187 YK-FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
               G   + A   L++  +    +NG  + +DG 
Sbjct: 204 PPRLGRPEEYAALVLHILENP--MLNGEVVRLDGA 236

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 98.2 bits (245), Expect = 3e-24
 Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 9/209 (4%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
           V  + + G  A+    +V   + A  ++++ +  FG LD+LVN A         + S   
Sbjct: 78  VDEITAAGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEE 137

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 131
           F  VI +   G F     A  Y +  G  +A  +  G IIN S+      +  Q + SAA
Sbjct: 138 FDAVIAVHLKGHFATMRHAAAYWR--GLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAA 195

Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 191
           KA + ++T   A E G  Y + VN IAP     T     +  E + ++       +    
Sbjct: 196 KAGIATLTLVGAAEMGR-YGVTVNAIAPS--ARTRMTETVFAEMMATQD----QDFDAMA 248

Query: 192 KWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             +++   ++L S   + V G    V+GG
Sbjct: 249 PENVSPLVVWLGSAEARDVTGKVFEVEGG 277

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score = 95.3 bits (238), Expect = 7e-24
 Identities = 41/220 (18%), Positives = 79/220 (35%), Gaps = 31/220 (14%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
           GR    L +         I +     D+ K       V+  + +   +D LV+AAA    
Sbjct: 35  GRNPEHLAALAEIEGVEPIES-----DIVKEVLEEGGVD-KLKNLDHVDTLVHAAAVARD 88

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS--ATLHY 119
              E  S   +   ++++ +    +  + L  L+            G +I I+  A    
Sbjct: 89  TTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAA---------SGCVIYINSGAGNGP 139

Query: 120 TATW--YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR 177
                 Y    +A+K A+  +  +   E   +  IRV+ ++PGP  +T  +  L   +  
Sbjct: 140 HPGNTIY----AASKHALRGLADAFRKEEA-NNGIRVSTVSPGPT-NTPMLQGLMDSQGT 193

Query: 178 SKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIV 217
           +          + E  +IA A  ++   AG+      + V
Sbjct: 194 N-----FRPEIYIEPKEIANAIRFVID-AGETTQITNVDV 227

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 98.5 bits (246), Expect = 8e-24
 Identities = 52/226 (23%), Positives = 85/226 (37%), Gaps = 30/226 (13%)

Query: 9   RSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFG-KLDILVNAAAG----NFL 61
             A   L  +   +    L  DV   +   ++      H G K+DILVN A G      L
Sbjct: 246 DGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVDILVNNA-GITRDKLL 304

Query: 62  V--PAEDLSPNGFRTVIEIDSVGTFIMCHEALKY--LKKGGRGQASSSSGGIIINISATL 117
                +      +  VI ++ +    +    +    + +GGR          +I +S+  
Sbjct: 305 ANMDEKR-----WDAVIAVNLLAPQRLTEGLVGNGTIGEGGR----------VIGLSSMA 349

Query: 118 HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR 177
                  Q + +  KA +  +  +LA     D  I +N +APG I +T     + P   R
Sbjct: 350 GIAGNRGQTNYATTKAGMIGLAEALAPVLA-DKGITINAVAPGFI-ETKMTEAI-PLATR 406

Query: 178 SKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 223
                  + ++ G+  D+A    Y AS A   V GNT+ V G   L
Sbjct: 407 EVGRRLNSLFQGGQPVDVAELIAYFASPASNAVTGNTIRVCGQAML 452

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score = 92.4 bits (230), Expect = 2e-22
 Identities = 37/156 (23%), Positives = 61/156 (39%), Gaps = 8/156 (5%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
           L  AV  L   G  A G+  DVR  ++ VR+ +      G +D++ + A      P   +
Sbjct: 68  LEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQM 127

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
           + + +R VI+ID  G+       L  L + G        GG I   ++            
Sbjct: 128 NHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGT-------GGHIAFTASFAGLVPNAGLGT 180

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 163
              AK  V  +  +LA E      I V+ + P  ++
Sbjct: 181 YGVAKYGVVGLAETLAREVK-PNGIGVSVLCPMVVE 215

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 89.9 bits (224), Expect = 8e-22
 Identities = 54/220 (24%), Positives = 86/220 (39%), Gaps = 20/220 (9%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            RR   LR+    L + G     LE DV  R+     V ST+   G LDILVN A    L
Sbjct: 38  ARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLL 97

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL-HYT 120
            P ED     +  +I+ + +G   M   AL +L +           G ++ +S+      
Sbjct: 98  GPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRS---------KGTVVQMSSIAGRVN 148

Query: 121 ---ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR 177
              A  Y     A K  V++ + +L  E   +  +RV  I PG   DT     +     +
Sbjct: 149 VRNAAVY----QATKFGVNAFSETLRQEVT-ERGVRVVVIEPGTT-DTELRGHITHTATK 202

Query: 178 SKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIV 217
                 ++  +  +  DIA A  Y  + A  +   + + +
Sbjct: 203 EMYEQRISQIRKLQAQDIAEAVRYAVT-APHHATVHEIFI 241

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score = 87.7 bits (218), Expect = 1e-20
 Identities = 49/221 (22%), Positives = 85/221 (38%), Gaps = 14/221 (6%)

Query: 2   GRRKTVLRSAVAALHSLGIP--AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN 59
            R    +    A   S G P   I    D+   ED + +  +  +    +DI +N A   
Sbjct: 63  ARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLA 122

Query: 60  FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL-H 118
                   S +G++ +  ++ +   I   EA + +K+  R        G IINI++   H
Sbjct: 123 RPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKE--RNVDD----GHIININSMSGH 176

Query: 119 YTATWYQIHV-SAAKAAVDSITRSLALEWGT-DYAIRVNGIAPGPIKDTAGVSKLAPEEI 176
                   H  SA K AV ++T  L  E       IR   I+PG + +T   +    ++ 
Sbjct: 177 RVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVV-ET-QFAFKLHDKD 234

Query: 177 RSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIV 217
             KA       K  +  D+A A +Y+ S    ++    + +
Sbjct: 235 PEKAAATYEQMKCLKPEDVAEAVIYVLS-TPAHIQIGDIQM 274

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 88.2 bits (219), Expect = 1e-20
 Identities = 43/209 (20%), Positives = 82/209 (39%), Gaps = 25/209 (11%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
           V  +   G  A+     V   E   ++V++ ++ FG++D++VN A          +S   
Sbjct: 59  VEEIRRRGGKAVANYDSV---EAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDED 115

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 131
           +  +  +   G+F +   A  ++KK   G+        II  ++       + Q + SAA
Sbjct: 116 WDIIQRVHLRGSFQVTRAAWDHMKKQNYGR--------IIMTASASGIYGNFGQANYSAA 167

Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 191
           K  +  +  +L +E G    I  N IAP     +     + PE++     + +       
Sbjct: 168 KLGLLGLANTLVIE-GRKNNIHCNTIAPNAG--SRMTETVMPEDLV----EALKPE---- 216

Query: 192 KWDIAMAALYLASDAGKYVNGNTLIVDGG 220
              +A   L+L  ++    NG    V  G
Sbjct: 217 --YVAPLVLWLCHESC-EENGGLFEVGAG 242

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 87.8 bits (218), Expect = 6e-20
 Identities = 52/209 (24%), Positives = 96/209 (45%), Gaps = 24/209 (11%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
           V  + + G  A   + DV   +D+  ++++ I+ +G +DILVN A          +S   
Sbjct: 361 VDEIKAAGGEAWPDQHDVA--KDSEAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQE 418

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 131
           + +V ++  +GTF +   A  Y  +           G IINI++T      + Q + S++
Sbjct: 419 WDSVQQVHLIGTFNLSRLAWPYFVEKQ--------FGRIINITSTSGIYGNFGQANYSSS 470

Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 191
           KA +  +++++A+E G    I+VN +AP    +TA    +  E+ +    +   A     
Sbjct: 471 KAGILGLSKTMAIE-GAKNNIKVNIVAPH--AETAMTLSIMREQDK----NLYHAD---- 519

Query: 192 KWDIAMAALYLASDAGKYVNGNTLIVDGG 220
              +A   +YL +D    V G T  + GG
Sbjct: 520 --QVAPLLVYLGTDDV-PVTGETFEIGGG 545

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 87.4 bits (217), Expect = 7e-20
 Identities = 45/209 (21%), Positives = 86/209 (41%), Gaps = 25/209 (11%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
           V  +   G  A+    +V    D  ++VE+ + +FG + +++N A        + ++   
Sbjct: 58  VDEIVKNGGVAVADYNNV---LDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKD 114

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 131
           ++ VI++   G F +   A  Y +K   G+        I+N S+       + Q + ++A
Sbjct: 115 YKLVIDVHLNGAFAVTKAAWPYFQKQKYGR--------IVNTSSPAGLYGNFGQANYASA 166

Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 191
           K+A+     +LA E G  Y I+ N IA  P+  +     + P  +     + +       
Sbjct: 167 KSALLGFAETLAKE-GAKYNIKANAIA--PLARSRMTESIMPPPML----EKLGPE---- 215

Query: 192 KWDIAMAALYLASDAGKYVNGNTLIVDGG 220
              +A   LYL+S     + G    V  G
Sbjct: 216 --KVAPLVLYLSSAEN-ELTGQFFEVAAG 241

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score = 85.3 bits (212), Expect = 6e-20
 Identities = 38/163 (23%), Positives = 64/163 (39%), Gaps = 19/163 (11%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            RR+  + +    +   G  A+    DV  R       ++ ++ +G++D+LVN A    L
Sbjct: 35  ARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPL 94

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL-HYT 120
            P   +  + +  +I+++  G        L  ++    GQ        IINI +      
Sbjct: 95  SPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQ--------IINIGSIGALSV 146

Query: 121 ---ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160
              A  Y     A K AV +I+  L  E      IRV  + PG
Sbjct: 147 VPTAAVY----CATKFAVRAISDGLRQE---STNIRVTCVNPG 182

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score = 85.9 bits (213), Expect = 6e-20
 Identities = 38/163 (23%), Positives = 69/163 (42%), Gaps = 5/163 (3%)

Query: 3   RRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
            R+  +  A+A L +   G   +G++ DV  RE      +     FG + IL N A  N 
Sbjct: 40  IRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGPVSILCNNAGVNL 99

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
             P E+ S + +  ++ ++  G        +  + +  R +A    GG ++N ++   + 
Sbjct: 100 FQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVE--RVKAGEQKGGHVVNTASMAAFL 157

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 163
           A       +  K AV  ++ SL       Y I V+ + PG +K
Sbjct: 158 AAGSPGIYNTTKFAVRGLSESLHYSLL-KYEIGVSVLCPGLVK 199

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} Length = 319

 Score = 86.0 bits (213), Expect = 7e-20
 Identities = 63/233 (27%), Positives = 96/233 (41%), Gaps = 46/233 (19%)

Query: 25  LEGDVRKREDAVRVVESTIN--------HFGKLDILVNAAA------GNFLVPAEDLSPN 70
           +  +V   +    V   TI+          G++DILV++ A         L      S  
Sbjct: 102 VPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLL----QTSRK 157

Query: 71  GFRTVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-----WY 124
           G+   +   S  +F+ +    L  +K+GG           +      L Y A+      Y
Sbjct: 158 GYLAAVSS-SSYSFVSLLQHFLPLMKEGG---------SAL-----ALSYIASEKVIPGY 202

Query: 125 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA--GVSKLAPEEIRSKATD 182
              +S+AKAA++S  R+LA E G   A+RVN I+ GP+K  A   + K   +     A D
Sbjct: 203 GGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAID 262

Query: 183 YMAAYKFGEK----WDIAMAALYLASDAGKYVNGNTLIVDGG-NWLSNPRDLP 230
           Y  A    +K     D+  AAL+L S   + V G TL VD G + +    D  
Sbjct: 263 YSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLHAMGQALDSK 315

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* Length = 315

 Score = 83.3 bits (206), Expect = 6e-19
 Identities = 60/222 (27%), Positives = 90/222 (40%), Gaps = 45/222 (20%)

Query: 25  LEGDVRKREDAVRVVESTIN--------HFGKLDILVNAAA------GNFLVPAEDLSPN 70
           +  D++  +    V   TI           G +DILV++ A         L    + S  
Sbjct: 89  VPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLL----ETSRK 144

Query: 71  GFRTVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-----WY 124
           G+       S  +F+ +       + +GG           +     TL Y A       Y
Sbjct: 145 GYLAASSN-SAYSFVSLLQHFGPIMNEGG---------SAV-----TLSYLAAERVVPGY 189

Query: 125 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA--GVSKLAPEEIRSKATD 182
              +S+AKAA++S TR+LA E G  Y +RVN I+ GP+K  A   + K   +     A D
Sbjct: 190 GGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSFIDYAID 249

Query: 183 YMAAYKFGEK----WDIAMAALYLASDAGKYVNGNTLIVDGG 220
           Y        +     D+  AAL+L S   + V+G TL VD G
Sbjct: 250 YSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNG 291

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* Length = 297

 Score = 82.8 bits (205), Expect = 8e-19
 Identities = 54/217 (24%), Positives = 79/217 (36%), Gaps = 52/217 (23%)

Query: 37  RVVESTINHFGKLDILVNAAA------GNFLVPAEDLSPNGFRTVIEIDSVGTFI-MCHE 89
              E     FG +DILV++ A         L    + S  G+   I   S  +F+ +   
Sbjct: 108 EAAECVRQDFGSIDILVHSLANGPEVSKPLL----ETSRKGYLAAISA-SSYSFVSLLSH 162

Query: 90  ALKYLKKGGRGQASSSSGGIIINISATLHYTAT-----WYQIHVSAAKAAVDSITRSLAL 144
            L  +  GG           I     +L Y A+      Y   +S+AKAA++S TR LA 
Sbjct: 163 FLPIMNPGG---------ASI-----SLTYIASERIIPGYGGGMSSAKAALESDTRVLAF 208

Query: 145 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW----------D 194
           E G    IRVN I+ GP+   A                     ++              +
Sbjct: 209 EAGRKQNIRVNTISAGPLGSRAA----------KAIGFIDTMIEYSYNNAPIQKTLTADE 258

Query: 195 IAMAALYLASDAGKYVNGNTLIVDGG-NWLSNPRDLP 230
           +  AA +L S     + G T+ VD G N +    D P
Sbjct: 259 VGNAAAFLVSPLASAITGATIYVDNGLNSMGVALDSP 295

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 82.9 bits (205), Expect = 1e-18
 Identities = 43/187 (22%), Positives = 78/187 (41%), Gaps = 27/187 (14%)

Query: 10  SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSP 69
           +  A  + + +  + L  DV+ +    R ++  I   G++D+L++ A      PAE  +P
Sbjct: 51  AGFARDNDVDLRTLEL--DVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTP 108

Query: 70  NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-----WY 124
             F  + +I+ + T  +   AL ++++   G         +I IS++     T      Y
Sbjct: 109 EQFAELYDINVLSTQRVNRAALPHMRRQKHGL--------LIWISSSSSAGGTPPYLAPY 160

Query: 125 QIHVSAAKAAVDSITRSLALE---WGTDYAIRVNGIAPGPIK-DTAGVSKLAPEEIRSKA 180
                AAKAA+D+I    A E   WG    I  + I PG     T   +     +  ++ 
Sbjct: 161 ----FAAKAAMDAIAVQYARELSRWG----IETSIIVPGAFTSGTNHFAHSGVPDDHARQ 212

Query: 181 TDYMAAY 187
            +Y A  
Sbjct: 213 AEYEAGP 219

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 79.5 bits (197), Expect = 2e-18
 Identities = 24/162 (14%), Positives = 51/162 (31%), Gaps = 22/162 (13%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
           GRR   L      + +  +PA     D+    +A  ++E      G LD+LV+A      
Sbjct: 29  GRRAGALAELAREVGARALPA-----DLADELEAKALLE----EAGPLDLLVHAVGKAGR 79

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
               +   +    ++    +         LK+ +     +         +   A   Y  
Sbjct: 80  ASVREAGRDLVEEMLAAHLLTAA----FVLKHARFQKGAR--------AVFFGAYPRYVQ 127

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 163
                  +AAK A+++   +   E      + +  +    + 
Sbjct: 128 VPGFAAYAAAKGALEAYLEAARKELL-REGVHLVLVRLPAVA 168

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 80.3 bits (199), Expect = 3e-18
 Identities = 44/169 (26%), Positives = 67/169 (39%), Gaps = 21/169 (12%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF- 60
           GRR+  L+  +     LG      + DVR R     ++ S    +  +DILVN A     
Sbjct: 31  GRRQERLQ-ELKD--ELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALG 87

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL-HY 119
           + PA   S   + T+I+ ++ G   M    L  + +   G         IINI +T   +
Sbjct: 88  MEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGH--------IINIGSTAGSW 139

Query: 120 T---ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT 165
                  Y     A KA V   + +L  +     A+RV  I PG +  T
Sbjct: 140 PYAGGNVY----GATKAFVRQFSLNLRTDL-HGTAVRVTDIEPGLVGGT 183

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 79.2 bits (196), Expect = 9e-18
 Identities = 38/204 (18%), Positives = 70/204 (34%), Gaps = 26/204 (12%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81
            +  + DV  +      +      +G  D +VN A    L   +    N ++ + +++ +
Sbjct: 61  TLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVL 120

Query: 82  GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL-HYT---ATWYQIHVSAAKAAVDS 137
           G        L  +K    G         IINIS+     T      Y       K AV +
Sbjct: 121 GLLNGMQAVLAPMKARNCGT--------IINISSIAGKKTFPDHAAY----CGTKFAVHA 168

Query: 138 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW---- 193
           I+ ++  E      +RV  IAP  +  T  +S    ++I+     +              
Sbjct: 169 ISENVREEVA-ASNVRVMTIAPSAV-KTELLSHTTSQQIKDGYDAW---RVDMGGVLAAD 223

Query: 194 DIAMAALYLASDAGKYVNGNTLIV 217
           D+A A L+      + V    + +
Sbjct: 224 DVARAVLFAYQ-QPQNVCIREIAL 246

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 79.2 bits (196), Expect = 1e-17
 Identities = 54/219 (24%), Positives = 86/219 (39%), Gaps = 45/219 (20%)

Query: 21  PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGF 72
            A   + DV+  E+ +   E      G +D + ++ A        G F     + S  GF
Sbjct: 85  EAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFS----ETSREGF 140

Query: 73  RTVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 131
               +I S  +   + HEA K + +GG   A++  GG      A  +Y        +  A
Sbjct: 141 LLAQDI-SSYSLTIVAHEAKKLMPEGGSIVATTYLGGE----FAVQNYNV------MGVA 189

Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 191
           KA++++  + LAL+ G D  IRVN I+ GPI+  +                +    K  E
Sbjct: 190 KASLEANVKYLALDLGPD-NIRVNAISAGPIRTLSA----------KGVGGFNTILKEIE 238

Query: 192 KW----------DIAMAALYLASDAGKYVNGNTLIVDGG 220
           +           ++   A YL SD    V G  + VD G
Sbjct: 239 ERAPLKRNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSG 277

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269

 Score = 78.4 bits (194), Expect = 2e-17
 Identities = 48/231 (20%), Positives = 79/231 (34%), Gaps = 47/231 (20%)

Query: 17  SLGIPAIGLEGDVRKREDAVRVVESTINHFG---KLDILVNAAAGNFLVPAEDLSPN--- 70
            L   A  LE DV+  E    +        G   KLD +V++    F +P   +  N   
Sbjct: 53  RLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIG--F-MPQTGMGINPFF 109

Query: 71  -----GFRTVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-- 122
                     I I S  ++  M    L  +  GG          I+      + +  +  
Sbjct: 110 DAPYADVSKGIHI-SAYSYASMAKALLPIMNPGG---------SIV-----GMDFDPSRA 154

Query: 123 --WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
              Y   ++ AK+A++S+ R +A E G    +R N +A GPI+  A  + +         
Sbjct: 155 MPAYNW-MTVAKSALESVNRFVAREAGKY-GVRSNLVAAGPIRTLAMSAIVGGALGEEAG 212

Query: 181 TDYMAAYKFGE-----KW------DIAMAALYLASDAGKYVNGNTLIVDGG 220
                  +  +      W       +A     L SD      G+ +  DGG
Sbjct: 213 AQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGG 263

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 80.6 bits (199), Expect = 2e-17
 Identities = 50/218 (22%), Positives = 85/218 (38%), Gaps = 30/218 (13%)

Query: 12  VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNG 71
           V  +   G  A+     V    D  +V+E+ I  FG++DILVN A           S   
Sbjct: 69  VDEIRKAGGEAVADYNSV---IDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQD 125

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKK--GGRGQASSSSGGIIINISATLHYTATWYQIHVS 129
           +  V ++   G+F     A  Y+KK   GR   +SS+ GI  N            Q++ +
Sbjct: 126 WNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFG----------QVNYT 175

Query: 130 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKF 189
           AAK  +  +  ++A+E G    +  N I P     +     + P+ +     + +     
Sbjct: 176 AAKMGLIGLANTVAIE-GARNNVLCNVIVPT--AASRMTEGILPDILF----NELKPKL- 227

Query: 190 GEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPR 227
                IA    YL  ++ +  NG+ +    G W +   
Sbjct: 228 -----IAPVVAYLCHESCE-DNGSYIESAAG-WATKLH 258

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 78.4 bits (194), Expect = 2e-17
 Identities = 47/220 (21%), Positives = 81/220 (36%), Gaps = 47/220 (21%)

Query: 21  PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGF 72
            +I L  DV    +      S     G +  + +  A        G +L    + + +GF
Sbjct: 60  DSIILPCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYL----NTNRDGF 115

Query: 73  RTVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV-SA 130
                I S  +   +   A   + +GG     +  GG         +Y       +V   
Sbjct: 116 LLAHNI-SSYSLTAVVKAARPMMTEGGSIVTLTYLGGE----LVMPNY-------NVMGV 163

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 190
           AKA++D+  + LA + G +  IRVN I+ GPI+  +              +D+ +  K  
Sbjct: 164 AKASLDASVKYLAADLGKE-NIRVNSISAGPIRTLSA----------KGISDFNSILKDI 212

Query: 191 EKW----------DIAMAALYLASDAGKYVNGNTLIVDGG 220
           E+           ++   A +L SD  + + G  L VD G
Sbjct: 213 EERAPLRRTTTPEEVGDTAAFLFSDMSRGITGENLHVDSG 252

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score = 78.4 bits (194), Expect = 2e-17
 Identities = 49/220 (22%), Positives = 81/220 (36%), Gaps = 55/220 (25%)

Query: 25  LEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTVI 76
              DV + E+   +       FG LD LV+A A        G ++    D     +   +
Sbjct: 63  FRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYI----DTRRQDWLLAL 118

Query: 77  EIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHY-----TATWYQIHVSA 130
           E+ S  + + +   A   L++GG         GI+     TL Y         Y + ++ 
Sbjct: 119 EV-SAYSLVAVARRAEPLLREGG---------GIV-----TLTYYASEKVVPKYNV-MAI 162

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 190
           AKAA+++  R LA E G    +RVN I+ GP++  A                +   Y   
Sbjct: 163 AKAALEASVRYLAYELGPK-GVRVNAISAGPVRTVAA----------RSIPGFTKMYDRV 211

Query: 191 EKW----------DIAMAALYLASDAGKYVNGNTLIVDGG 220
            +           ++    L+L S     + G  + VD G
Sbjct: 212 AQTAPLRRNITQEEVGNLGLFLLSPLASGITGEVVYVDAG 251

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score = 78.1 bits (193), Expect = 3e-17
 Identities = 34/166 (20%), Positives = 55/166 (33%), Gaps = 20/166 (12%)

Query: 2   GRRKTVLRSAVAALHS--LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN 59
            RR   L      +            + D+ + E     +E+    F  +DILVN A   
Sbjct: 67  ARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKA 126

Query: 60  F-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL- 117
                   ++    + V + +      +    L   +    G         I+N+ +   
Sbjct: 127 LGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGD--------IVNLGSIAG 178

Query: 118 HYT---ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160
                  + Y     A+K AV + T SL  E   +  IRV  IAPG
Sbjct: 179 RDAYPTGSIY----CASKFAVGAFTDSLRKEL-INTKIRVILIAPG 219

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score = 77.2 bits (191), Expect = 3e-17
 Identities = 34/216 (15%), Positives = 68/216 (31%), Gaps = 27/216 (12%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
           GR ++ L   V     L         D+   ++  ++ E           +V++A   + 
Sbjct: 32  GRSESKLS-TVTN--CLSNNVGYRARDLASHQEVEQLFEQL---DSIPSTVVHSAGSGYF 85

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
              ++  P   +T+IE +      +  E +K  K              ++ I +T     
Sbjct: 86  GLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVN---------VVMIMSTAAQQP 136

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
              +    A K AV  +  S+ LE      +++  + PG +  T         E    + 
Sbjct: 137 KAQESTYCAVKWAVKGLIESVRLELK-GKPMKIIAVYPGGM-AT---------EFWETSG 185

Query: 182 DYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIV 217
             +    F    D A+     A         + + V
Sbjct: 186 KSLDTSSFMSAEDAALMIHG-ALANIGNGYVSDITV 220

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score = 77.7 bits (192), Expect = 4e-17
 Identities = 26/163 (15%), Positives = 49/163 (30%), Gaps = 10/163 (6%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
             K  L    A    LG        D   RED     +      G + ILVN A   +  
Sbjct: 63  INKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTS 122

Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 122
                         E++ +  F      L  + K   G         I+ +++   + + 
Sbjct: 123 DLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGH--------IVTVASAAGHVSV 174

Query: 123 WYQIHVSAAKAAVDSITRSLALEWGTDYA--IRVNGIAPGPIK 163
            + +   ++K A     ++L  E        ++   + P  + 
Sbjct: 175 PFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVN 217

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275

 Score = 77.6 bits (192), Expect = 4e-17
 Identities = 57/220 (25%), Positives = 85/220 (38%), Gaps = 55/220 (25%)

Query: 25  LEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTVI 76
            E DV K E    +  S     G LD +V++ A        G+ L    + S + F T +
Sbjct: 61  YELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLL----ETSKSAFNTAM 116

Query: 77  EIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHY-----TATWYQIHVSA 130
           EI SV + I + +     L  G           ++     TL Y         Y + +  
Sbjct: 117 EI-SVYSLIELTNTLKPLLNNGA---------SVL-----TLSYLGSTKYMAHYNV-MGL 160

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 190
           AKAA++S  R LA++ G    IRVN ++ GPI+  A           S   D+    K+ 
Sbjct: 161 AKAALESAVRYLAVDLGKH-HIRVNALSAGPIRTLAS----------SGIADFRMILKWN 209

Query: 191 EKW----------DIAMAALYLASDAGKYVNGNTLIVDGG 220
           E            ++  A +YL S     V+G    VD G
Sbjct: 210 EINAPLRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAG 249

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 77.3 bits (191), Expect = 5e-17
 Identities = 41/167 (24%), Positives = 69/167 (41%), Gaps = 25/167 (14%)

Query: 4   RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP 63
           R+T     + A +     AI L  DV   E    V    +  +G++D+LVN A    +  
Sbjct: 37  RRTEALDDLVAAYPDRAEAISL--DVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGA 94

Query: 64  AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT- 122
            E+ +    R + E+   G   +    L  +    R + S    G ++NIS+     +  
Sbjct: 95  FEETTERELRDLFELHVFGPARLTRALLPQM----RERGS----GSVVNISSFGGQLSFA 146

Query: 123 ---WYQIHVSAAKAAVDSITRSLALE---WGTDYAIRVNGIAPGPIK 163
               Y    SA KAA++ ++  LA E   +G    I+V  + PG  +
Sbjct: 147 GFSAY----SATKAALEQLSEGLADEVAPFG----IKVLIVEPGAFR 185

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265

 Score = 76.8 bits (190), Expect = 6e-17
 Identities = 46/215 (21%), Positives = 79/215 (36%), Gaps = 44/215 (20%)

Query: 25  LEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTVI 76
           L+ DV +      +       + K D  V++          G+++     ++  GF+   
Sbjct: 64  LQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYV---NAVTREGFKIAH 120

Query: 77  EIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 135
           +I S  +F+ M       L  G      S  G       A  +Y        +  AKA++
Sbjct: 121 DI-SSYSFVAMAKACRSMLNPGSALLTLSYLGAE----RAIPNYNV------MGLAKASL 169

Query: 136 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW-- 193
           ++  R +A   G +  +RVN I+ GPI+  A           S   D+       E    
Sbjct: 170 EANVRYMANAMGPE-GVRVNAISAGPIRTLAA----------SGIKDFRKMLAHCEAVTP 218

Query: 194 --------DIAMAALYLASDAGKYVNGNTLIVDGG 220
                   D+  +A +L SD    ++G  + VDGG
Sbjct: 219 IRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGG 253

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score = 77.3 bits (191), Expect = 6e-17
 Identities = 54/213 (25%), Positives = 78/213 (36%), Gaps = 47/213 (22%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTVIEID 79
           DV        V E+    +GKLD LV+A          G ++    D S   F   + I 
Sbjct: 89  DVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYI----DTSEANFTNTMLI- 143

Query: 80  SVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV-SAAKAAVDS 137
           SV +   +   A K +  GG     +  G          +Y       +V   AKAA+++
Sbjct: 144 SVYSLTAVSRRAEKLMADGGSILTLTYYGAE----KVMPNY-------NVMGVAKAALEA 192

Query: 138 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW---- 193
             + LA++ G    IRVN I+ GPIK  A           S   D+    K+ E      
Sbjct: 193 SVKYLAVDLGPQ-NIRVNAISAGPIKTLAA----------SGIGDFRYILKWNEYNAPLR 241

Query: 194 ------DIAMAALYLASDAGKYVNGNTLIVDGG 220
                 ++    LY  SD  + V G     D G
Sbjct: 242 RTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSG 274

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score = 77.3 bits (191), Expect = 7e-17
 Identities = 55/213 (25%), Positives = 84/213 (39%), Gaps = 47/213 (22%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTVIEID 79
           DV   E    + +     +G LD +V+A A        G ++    D S   F T + I 
Sbjct: 88  DVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYV----DTSLGNFLTSMHI- 142

Query: 80  SVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV-SAAKAAVDS 137
           S  +F  +  +A   +  GG     S  G          HY       +V    KAA+++
Sbjct: 143 SCYSFTYIASKAEPLMTNGGSILTLSYYGAE----KVVPHY-------NVMGVCKAALEA 191

Query: 138 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW---- 193
             + LA++ G    IRVN I+ GP++  A           S  +D+     + +      
Sbjct: 192 SVKYLAVDLGKQ-QIRVNAISAGPVRTLAS----------SGISDFHYILTWNKYNSPLR 240

Query: 194 ------DIAMAALYLASDAGKYVNGNTLIVDGG 220
                 D+  AALYL SD G+   G T+ VD G
Sbjct: 241 RNTTLDDVGGAALYLLSDLGRGTTGETVHVDCG 273

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271

 Score = 76.9 bits (190), Expect = 7e-17
 Identities = 52/215 (24%), Positives = 74/215 (34%), Gaps = 44/215 (20%)

Query: 25  LEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTVI 76
              DV        +  S   H+  LD LV++          G+FL   + L+   FR   
Sbjct: 69  FPCDVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFL---DGLTRENFRIAH 125

Query: 77  EIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 135
           +I S  +F  +   AL  L         S  G       A  +Y        +  AKAA+
Sbjct: 126 DI-SAYSFPALAKAALPMLSDDASLLTLSYLGAE----RAIPNYNT------MGLAKAAL 174

Query: 136 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW-- 193
           ++  R LA+  G    +RVN I+ GPIK  A           S    +     F E    
Sbjct: 175 EASVRYLAVSLGAK-GVRVNAISAGPIKTLAA----------SGIKSFGKILDFVESNSP 223

Query: 194 --------DIAMAALYLASDAGKYVNGNTLIVDGG 220
                    +  A  +L SD    V    + VD G
Sbjct: 224 LKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSG 258

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280

 Score = 76.5 bits (189), Expect = 1e-16
 Identities = 46/224 (20%), Positives = 80/224 (35%), Gaps = 53/224 (23%)

Query: 21  PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGF 72
           PA  L  DV   ++   +       +  LD +V++ A        GNF+   + ++  GF
Sbjct: 76  PAAVLPCDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFI---DCVTREGF 132

Query: 73  RTVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHY-----TATWYQI 126
               +I S  +F  +  E    +K             ++      L Y         Y  
Sbjct: 133 SIAHDI-SAYSFAALAKEGRSMMKNRN--------ASMV-----ALTYIGAEKAMPSYNT 178

Query: 127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA 186
            +  AKA++++  R  AL  G D  I+VN ++ GPIK  A           S  +++   
Sbjct: 179 -MGVAKASLEATVRYTALALGED-GIKVNAVSAGPIKTLAA----------SGISNFKKM 226

Query: 187 YKFGEKW----------DIAMAALYLASDAGKYVNGNTLIVDGG 220
             +              ++     +L SD    + G  + VD G
Sbjct: 227 LDYNAMVSPLKKNVDIMEVGNTVAFLCSDMATGITGEVVHVDAG 270

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285

 Score = 76.5 bits (189), Expect = 1e-16
 Identities = 53/220 (24%), Positives = 87/220 (39%), Gaps = 54/220 (24%)

Query: 25  LEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTVI 76
           ++ DV   ED   + +    ++G LDI+V++ A        G  +    D S  GF+  +
Sbjct: 76  VKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVI----DTSREGFKIAM 131

Query: 77  EIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHY-----TATWYQIHVSA 130
           +I SV + I +  E L  ++           G I+     TL Y         Y + +  
Sbjct: 132 DI-SVYSLIALTRELLPLMEGRN--------GAIV-----TLSYYGAEKVVPHYNV-MGI 176

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 190
           AKAA++S  R LA +       R+N I+ GP+K  A              T +    +  
Sbjct: 177 AKAALESTVRYLAYDIAKH-GHRINAISAGPVKTLAA----------YSITGFHLLMEHT 225

Query: 191 EKW----------DIAMAALYLASDAGKYVNGNTLIVDGG 220
            K           D+   A++L SD  + + G  + VD G
Sbjct: 226 TKVNPFGKPITIEDVGDTAVFLCSDWARAITGEVVHVDNG 265

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score = 75.7 bits (187), Expect = 2e-16
 Identities = 38/164 (23%), Positives = 62/164 (37%), Gaps = 18/164 (10%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG-NF 60
           GRR+  L+ A+A   S     + L  DVR R      V++    F  L  L+N A     
Sbjct: 52  GRREERLQ-ALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALG 110

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS---ATL 117
             PA+    + + T+++ +  G        L  L   G       +G  I+N+       
Sbjct: 111 TDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHG-------AGASIVNLGSVAGKW 163

Query: 118 HY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160
            Y  +  Y       KA V+  + +L  +      +RV  + PG
Sbjct: 164 PYPGSHVY----GGTKAFVEQFSLNLRCDLQ-GTGVRVTNLEPG 202

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... Length = 329

 Score = 73.4 bits (180), Expect = 2e-15
 Identities = 53/248 (21%), Positives = 90/248 (36%), Gaps = 74/248 (29%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAA------GNFLVPAEDLSPNGFRTVIEIDSV 81
           ++ +      V       +GK+++LV++ A       + L    + S  G+   +   S 
Sbjct: 93  NMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLL----NTSRKGYLDALSK-SS 147

Query: 82  GTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-----WYQIHVSAAKAAV 135
            + I +C   +  +K             II     +L Y A+      Y   +S+AKAA+
Sbjct: 148 YSLISLCKYFVNIMKPQS---------SII-----SLTYHASQKVVPGYGGGMSSAKAAL 193

Query: 136 DSITRSLALEWGTDYAIRVNGIAPGPIK-------------------------------- 163
           +S TR LA   G +Y IR+N I+ GP+K                                
Sbjct: 194 ESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNI 253

Query: 164 -DTAGVSKLAPEEIRSKATDYMAAYKFGEKW----------DIAMAALYLASDAGKYVNG 212
            + +G  +          T    A ++ EK+          DI   A +L S   + + G
Sbjct: 254 MNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITG 313

Query: 213 NTLIVDGG 220
            T+ VD G
Sbjct: 314 QTIYVDNG 321

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 66.2 bits (162), Expect = 3e-13
 Identities = 29/172 (16%), Positives = 62/172 (36%), Gaps = 16/172 (9%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG--KLDILV-NAAAG 58
             R     + + ++    +  + L   V   +     V       G   L +L+ NA   
Sbjct: 35  TARDVEKATELKSIKDSRVHVLPL--TVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVL 92

Query: 59  NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG---RGQASSSSGGIIINISA 115
                  + +       +++++    ++  + L  LK       G   S S   +I IS+
Sbjct: 93  LSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISS 152

Query: 116 -----TLHYTATWYQIHVS--AAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160
                T + + +     ++   +KAA++   R+LA++   D  + V    PG
Sbjct: 153 GLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLK-DDNVLVVNFCPG 203

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 64.7 bits (158), Expect = 2e-12
 Identities = 31/168 (18%), Positives = 58/168 (34%), Gaps = 14/168 (8%)

Query: 4   RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVE--STINHFGKLDILV-NAAAGNF 60
           R       +  L         LE D+R  +   ++V     +     L++L  NA     
Sbjct: 56  RNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPK 115

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG---RGQASSSSGGIIINISA-- 115
                 +        ++ ++V   ++    L  LKK       Q        IIN+S+  
Sbjct: 116 SARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSIL 175

Query: 116 ---TLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160
                +     Y    S  K+A+++ T+SL+++      I    + PG
Sbjct: 176 GSIQGNTDGGMYAYRTS--KSALNAATKSLSVDLYPQ-RIMCVSLHPG 220

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 62.8 bits (153), Expect = 1e-11
 Identities = 38/163 (23%), Positives = 65/163 (39%), Gaps = 25/163 (15%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL 67
           L  A  AL         L+ DVR  +      E      G++D+LV  A    L P E L
Sbjct: 45  LWEAARALACPPGSLETLQLDVRDSKSVAAARERVT--EGRVDVLVCNAGLGLLGPLEAL 102

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----W 123
             +   +V++++ VGT  M    L  +K+ G G+        ++   +            
Sbjct: 103 GEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGR--------VLVTGSVGGLMGLPFNDV 154

Query: 124 YQIHVSAAKAAVDSITRSLALE---WGTDYAIRVNGIAPGPIK 163
           Y     A+K A++ +  SLA+    +G    + ++ I  GP+ 
Sbjct: 155 Y----CASKFALEGLCESLAVLLLPFG----VHLSLIECGPVH 189

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 61.2 bits (149), Expect = 3e-11
 Identities = 33/167 (19%), Positives = 61/167 (36%), Gaps = 13/167 (7%)

Query: 9   RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS 68
           ++AV  L + G+     + D+   +    + +     +G LD+LVN A   F V      
Sbjct: 43  QAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPF 102

Query: 69  PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 128
                  ++ +  GT  +C E L  +K  GR          ++N+S+ +   A       
Sbjct: 103 HIQAEVTMKTNFFGTRDVCTELLPLIKPQGR----------VVNVSSIMSVRALKSCSPE 152

Query: 129 SAAKAAVDSIT--RSLALEWGTDYAIRVNGIAPGPIKDTA-GVSKLA 172
              K   ++IT    + L        +           +A GV+K+ 
Sbjct: 153 LQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIG 199

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 45.3 bits (107), Expect = 7e-06
 Identities = 33/208 (15%), Positives = 55/208 (26%), Gaps = 45/208 (21%)

Query: 2   GRRKTVLRSAVAALHSLGIP-AIGLEGDVRKREDAVR-VVESTINHFGKLDILVNAAAGN 59
            R  T    AV  L +      +  + DV      +  + +    HFGKLDILVN A   
Sbjct: 43  CRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVA 102

Query: 60  FLVPAED------------------------------LSPNGFRTVIEIDSVGTFIMCHE 89
                 D                               +       ++I+  G   +   
Sbjct: 103 GFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEV 162

Query: 90  ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT----RSLALE 145
            +  L+         S    I+N+S++                   D++T      +   
Sbjct: 163 LIPLLQL--------SDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNM 214

Query: 146 WGTDYAIRVNGIAPGPIKDTA-GVSKLA 172
              D+   +      P    A   SK  
Sbjct: 215 LLKDFKENLIETNGWPSFGAAYTTSKAC 242

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	257
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.98
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.98
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.98
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.97
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.97
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.97
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.97
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.97
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.97
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.97
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.97
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.97
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.97
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.97
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.97
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.97
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.97
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.97
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.97
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.96
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.96
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.96
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.96
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.96
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.96
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.96
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.96
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.96
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.96
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.96
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.96
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.95
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.94
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.94
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.93
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.93
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.92
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.92
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.91
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.86
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.86
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.86
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.82
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.79
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.72
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.71
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.7
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.7
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.69
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.69
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.69
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.68
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.68
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.66
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.65
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.64
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.63
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.62
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.62
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.62
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.61
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.6
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.6
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.6
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.59
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.59
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.59
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.57
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.57
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.56
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.56
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.55
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.55
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.55
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.54
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.54
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.54
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.53
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.52
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.52
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.52
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.51
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.51
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.51
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.5
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.49
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.49
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.49
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.47
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.47
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.46
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.46
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.46
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.44
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.43
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.42
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.42
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.42
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.41
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.41
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.41
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.41
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.41
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.4
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.4
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.39
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.38
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.37
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.34
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.34
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.33
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.29
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.29
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.28
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.24
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.24
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.22
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.21
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.2
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.18
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.17
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.16
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.02
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.0
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	98.92
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	98.86
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	98.86
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	98.81
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	98.73
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	98.7
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	98.65
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	98.57
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	98.46
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	98.44
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	98.34
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	97.79
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	96.4
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	96.39
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	95.55
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	93.36
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	91.54
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	90.36
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	89.78
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	81.87
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	81.24

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=8.6e-48  Score=314.69  Aligned_cols=214  Identities=26%  Similarity=0.447  Sum_probs=196.1

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n   79 (257)
                      ++|++++++++.+++++.|.++.++++|++|+++++++++++.++||+||+||||||+.. ..++.+.+.++|++++++|
T Consensus        37 ~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vN  116 (254)
T 4fn4_A           37 VELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVN  116 (254)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999999999999999999999999999765 4789999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.|+|+++|+++|+|++++        +|+|||+||..+..+.++...|+++|+|+.+|+|+|+.|++ ++|||||+|+|
T Consensus       117 l~g~~~~~~~~~p~m~~~~--------~G~IVnisS~~g~~~~~~~~~Y~asKaal~~ltr~lA~ela-~~gIrVN~V~P  187 (254)
T 4fn4_A          117 LYSAFYSSRAVIPIMLKQG--------KGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYG-DQGIRAVAVLP  187 (254)
T ss_dssp             THHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTCSSSSCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHcC--------CcEEEEEechhhcCCCCCChHHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEe
Confidence            9999999999999999987        89999999999999999999999999999999999999999 99999999999


Q ss_pred             CcccCCCCCCCCChHH--HHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          160 GPIKDTAGVSKLAPEE--IRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       160 g~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      |+++|++........+  .........+++|+++|+|+|.+++||+|+.++|+||+.+.+|||+++
T Consensus       188 G~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pediA~~v~fLaSd~a~~iTG~~i~VDGG~t~  253 (254)
T 4fn4_A          188 GTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEASFVNGDAVVVDGGLTV  253 (254)
T ss_dssp             CSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEeCCCccc
Confidence            9999998655543322  233334445779999999999999999999999999999999999876

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=4.7e-48  Score=316.43  Aligned_cols=215  Identities=26%  Similarity=0.365  Sum_probs=201.3

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|++++++++++++.+.+.++..++||++|+++++++++++.+++|+||+||||||+....++.+.+.++|++++++|+
T Consensus        39 ~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl  118 (255)
T 4g81_D           39 NDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNL  118 (255)
T ss_dssp             CCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             EECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHh
Confidence            57999999999999999999999999999999999999999999999999999999998889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .|+|+++|+++|+|.+++.       +|+||++||..+..+.++...|+++|+|+.+|+|+++.|++ ++|||||+|+||
T Consensus       119 ~g~~~~~~~~~p~m~~~~~-------~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ltr~lA~ela-~~gIrVN~V~PG  190 (255)
T 4g81_D          119 TSAFLVSRSAAKRMIARNS-------GGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWA-QFNIQTNAIGPG  190 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHccC-------CCEEEEEeehhhcCCCCCchhHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeeC
Confidence            9999999999999986532       69999999999999999999999999999999999999999 999999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +++|++.......++..+.+....|++|+++|+|+|..++||+|+.++|+||+.+.+|||++-
T Consensus       191 ~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~a~~iTG~~i~VDGG~~A  253 (255)
T 4g81_D          191 YILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASDYINGQIIYVDGGWLA  253 (255)
T ss_dssp             SBCCGGGHHHHTCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCchhhcccCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhCCCcCCEEEECCCeEe
Confidence            999998655444566667778889999999999999999999999999999999999999753

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=2.2e-45  Score=303.23  Aligned_cols=209  Identities=29%  Similarity=0.440  Sum_probs=186.7

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|++++++++++++   +.++..+++|++|+++++++++++.++||+||+||||||+....++.+.+.++|++++++|+
T Consensus        59 ~~r~~~~l~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl  135 (273)
T 4fgs_A           59 TGRRKDVLDAAIAEI---GGGAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNV  135 (273)
T ss_dssp             EESCHHHHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHT
T ss_pred             EECCHHHHHHHHHHc---CCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHh
Confidence            368999888887766   67899999999999999999999999999999999999998889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .|+|+++|+++|+|++          +|+||+++|..+..+.++...|+++|+|+.+|+|+++.|++ ++|||||+|+||
T Consensus       136 ~g~~~~~~~~~p~m~~----------~G~IInisS~~~~~~~~~~~~Y~asKaav~~ltr~lA~Ela-~~gIrVN~V~PG  204 (273)
T 4fgs_A          136 KGVLFTVQKALPLLAR----------GSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLK-DRGIRINTLSPG  204 (273)
T ss_dssp             HHHHHHHHHHTTTEEE----------EEEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHTT-TSCEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHhh----------CCeEEEEeehhhccCCCCchHHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeeC
Confidence            9999999999999965          58899999999999999999999999999999999999999 999999999999


Q ss_pred             cccCCCCCCCCCh-----HHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          161 PIKDTAGVSKLAP-----EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       161 ~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +++|++.......     +...+.+....|++|+++|+|+|.+++||+|+.++|+||+.+.+|||++.
T Consensus       205 ~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~FLaSd~a~~iTG~~i~VDGG~s~  272 (273)
T 4fgs_A          205 PTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLASDDSSFVTGAELFVDGGSAQ  272 (273)
T ss_dssp             SBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             CCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCCeEeECcChhh
Confidence            9999986554322     23455667788999999999999999999999999999999999999764

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=2.7e-45  Score=297.52  Aligned_cols=202  Identities=29%  Similarity=0.325  Sum_probs=184.2

Q ss_pred             HHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHH
Q 025124            9 RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH   88 (257)
Q Consensus         9 ~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~   88 (257)
                      +++.+++.+.+.++..+.||++|+++++.+++     +++||+||||||+....++.+.+.++|++++++|+.|+|+++|
T Consensus        45 ~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~-----~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~  119 (247)
T 4hp8_A           45 DETLDIIAKDGGNASALLIDFADPLAAKDSFT-----DAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQ  119 (247)
T ss_dssp             HHHHHHHHHTTCCEEEEECCTTSTTTTTTSST-----TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHHHHhCCcEEEEEccCCCHHHHHHHHH-----hCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHH
Confidence            46677888889999999999999999887764     5899999999999888999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCC
Q 025124           89 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  168 (257)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~  168 (257)
                      +++|+|.++++       .|+|||+||..+..+.++...|++||+|+.+|+|+++.|++ ++|||||+|+||+++|+|..
T Consensus       120 ~~~~~m~~~g~-------~G~IVnisS~~~~~g~~~~~~Y~asKaav~~ltr~lA~Ela-~~gIrVNaV~PG~i~T~~~~  191 (247)
T 4hp8_A          120 AFAKELLAKGR-------SGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKLLANEWA-AKGINVNAIAPGYIETNNTE  191 (247)
T ss_dssp             HHHHHHHHHTC-------CEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSGGGH
T ss_pred             HHHHHHHHhCC-------CcEEEEEechhhCCCCCCChHHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEeeCCCCCcchh
Confidence            99999987642       69999999999999999999999999999999999999999 99999999999999999865


Q ss_pred             CCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          169 SKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      .........+.+....|++|+++|+|+|.+++||+|+.++|+||+++.+|||++.
T Consensus       192 ~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~iTG~~i~VDGG~~A  246 (247)
T 4hp8_A          192 ALRADAARNKAILERIPAGRWGHSEDIAGAAVFLSSAAADYVHGAILNVDGGWLA  246 (247)
T ss_dssp             HHHTSHHHHHHHHTTCTTSSCBCTHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             hcccCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCCcCCeEEECccccc
Confidence            4444455566677889999999999999999999999999999999999999764

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=6e-44  Score=293.17  Aligned_cols=214  Identities=26%  Similarity=0.260  Sum_probs=184.8

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++ ..+++.+.+.++.++.||++|+++++++++++.++||+||++|||||+..... .+.+.++|++.+++|+.
T Consensus        38 ~r~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iDiLVNnAGi~~~~~-~~~~~e~~~~~~~vNl~  115 (258)
T 4gkb_A           38 ARHAPDGA-FLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLDGLVNNAGVNDGIG-LDAGRDAFVASLERNLI  115 (258)
T ss_dssp             ESSCCCHH-HHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC-TTSCHHHHHHHHHHHTH
T ss_pred             ECCcccHH-HHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCC-ccCCHHHHHHHHHHHhH
Confidence            45655543 45667777889999999999999999999999999999999999999865444 57899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      ++|+++|+++|+|+++         +|+||++||..+..+.++...|+++|+|+.+|+|+++.|++ ++|||||+|+||+
T Consensus       116 g~~~~~~~~~p~m~~~---------~G~IVnisS~~~~~~~~~~~~Y~asKaav~~ltr~lA~ela-~~gIrVN~V~PG~  185 (258)
T 4gkb_A          116 HYYAMAHYCVPHLKAT---------RGAIVNISSKTAVTGQGNTSGYCASKGAQLALTREWAVALR-EHGVRVNAVIPAE  185 (258)
T ss_dssp             HHHHHHHHHHHHHHHH---------TCEEEEECCTHHHHCCSSCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECS
T ss_pred             HHHHHHHHHHHHHHhc---------CCeEEEEeehhhccCCCCchHHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecCC
Confidence            9999999999999865         69999999999999999999999999999999999999999 9999999999999


Q ss_pred             ccCCCCCCCCC----hHHHHHHhhhhccCC-CCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCC
Q 025124          162 IKDTAGVSKLA----PEEIRSKATDYMAAY-KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPR  227 (257)
Q Consensus       162 v~t~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~  227 (257)
                      ++|++......    .+..........|++ |+++|+|+|.+++||+|+.++|+||+++.+|||++...+.
T Consensus       186 i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v~fLaS~~a~~iTG~~i~VDGG~T~l~~s  256 (258)
T 4gkb_A          186 VMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLSPRASHTTGEWLFVDGGYTHLDRA  256 (258)
T ss_dssp             BCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTTSCTT
T ss_pred             CCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcCccCCeEEECCCcchhhhh
Confidence            99998755432    223345566677875 8999999999999999999999999999999998765443

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=1.6e-43  Score=286.59  Aligned_cols=188  Identities=29%  Similarity=0.367  Sum_probs=169.3

Q ss_pred             CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Q 025124           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (257)
Q Consensus        19 ~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (257)
                      +.++..+.+|++|+++++++++    ++|+||+||||||+..  ++.+.+.++|++++++|+.|+|+++|+++|.|+++ 
T Consensus        53 ~~~~~~~~~Dv~~~~~v~~~~~----~~g~iDiLVNNAGi~~--~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~-  125 (242)
T 4b79_A           53 HPRIRREELDITDSQRLQRLFE----ALPRLDVLVNNAGISR--DREEYDLATFERVLRLNLSAAMLASQLARPLLAQR-  125 (242)
T ss_dssp             CTTEEEEECCTTCHHHHHHHHH----HCSCCSEEEECCCCCC--GGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-
T ss_pred             cCCeEEEEecCCCHHHHHHHHH----hcCCCCEEEECCCCCC--CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-
Confidence            4578899999999999887764    5799999999999754  56788999999999999999999999999999865 


Q ss_pred             CCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHHH
Q 025124           99 RGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS  178 (257)
Q Consensus        99 ~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~  178 (257)
                              +|+|||+||..+..+.++...|++||+|+.+|+|+++.|++ ++|||||+|+||+++|||........+..+
T Consensus       126 --------~G~IVnisS~~~~~~~~~~~~Y~asKaav~~ltr~lA~Ela-~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~  196 (242)
T 4b79_A          126 --------GGSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYA-AERIRVNAIAPGWIDTPLGAGLKADVEATR  196 (242)
T ss_dssp             --------CEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCC-----CCCHHHHH
T ss_pred             --------CCeEEEEeeccccCCCCCCHHHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEeCCCCChhhhcccCCHHHHH
Confidence                    69999999999999999999999999999999999999999 999999999999999998776666667777


Q ss_pred             HhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          179 KATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       179 ~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      .+....|++|+++|+|+|++++||+|+.++|+||+++.+|||+.
T Consensus       197 ~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~iTG~~l~VDGG~l  240 (242)
T 4b79_A          197 RIMQRTPLARWGEAPEVASAAAFLCGPGASFVTGAVLAVDGGYL  240 (242)
T ss_dssp             HHHHTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCceEEECccHh
Confidence            78888999999999999999999999999999999999999975

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=7.3e-43  Score=284.37  Aligned_cols=201  Identities=24%  Similarity=0.280  Sum_probs=179.8

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|++++++++    .+.+.++.+++||++|+++++++++++.+++|+||+||||||+....++.+.+.++|++++++|+.
T Consensus        33 ~~~~~~~~~~----~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~  108 (247)
T 3ged_A           33 DIDEKRSADF----AKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLK  108 (247)
T ss_dssp             ESCHHHHHHH----HTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTH
T ss_pred             eCCHHHHHHH----HHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhH
Confidence            5777666554    344678999999999999999999999999999999999999988899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      |+|+++|+++|+|.++         +|+||++||..+..+.++...|++||+|+.+|+|+++.|++ + |||||+|+||+
T Consensus       109 g~~~~~~~~~~~m~~~---------~G~IInisS~~~~~~~~~~~~Y~asKaal~~ltk~lA~ela-~-~IrVN~I~PG~  177 (247)
T 3ged_A          109 APYELSRLCRDELIKN---------KGRIINIASTRAFQSEPDSEAYASAKGGIVALTHALAMSLG-P-DVLVNCIAPGW  177 (247)
T ss_dssp             HHHHHHHHHHHHHHHT---------TCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHT-T-TSEEEEEEECS
T ss_pred             HHHHHHHHHHHHHhhc---------CCcEEEEeecccccCCCCCHHHHHHHHHHHHHHHHHHHHHC-C-CCEEEEEecCc
Confidence            9999999999999875         59999999999999999999999999999999999999998 7 89999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCC
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSN  225 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~  225 (257)
                      ++|++...      ..+......|++|+++|+|+|++++||+++  +|+||+++.+|||++...
T Consensus       178 i~t~~~~~------~~~~~~~~~Pl~R~g~pediA~~v~fL~s~--~~iTG~~i~VDGG~s~r~  233 (247)
T 3ged_A          178 INVTEQQE------FTQEDCAAIPAGKVGTPKDISNMVLFLCQQ--DFITGETIIVDGGMSKRM  233 (247)
T ss_dssp             BCCCC---------CCHHHHHTSTTSSCBCHHHHHHHHHHHHHC--SSCCSCEEEESTTGGGCC
T ss_pred             CCCCCcHH------HHHHHHhcCCCCCCcCHHHHHHHHHHHHhC--CCCCCCeEEECcCHHHhC
Confidence            99986532      233445678999999999999999999974  699999999999987643

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=2.8e-42  Score=284.23  Aligned_cols=213  Identities=24%  Similarity=0.242  Sum_probs=194.8

Q ss_pred             CCCcHHHHHHHHHHHHhcC-CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCCCCHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTV   75 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~-~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~   75 (257)
                      ++|+++.++++.+++.+.+ .++.+++||++|+++++++++++.+++|+||++|||||+...    ..+.+.+.++|+..
T Consensus        38 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~  117 (256)
T 4fs3_A           38 TYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLA  117 (256)
T ss_dssp             EESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHH
Confidence            3688888999999888774 579999999999999999999999999999999999997643    45678899999999


Q ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEE
Q 025124           76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN  155 (257)
Q Consensus        76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~  155 (257)
                      +++|+.+++.+++.+.+++.+          +|+||++||..+..+.+++..|+++|+|+.+|+|+|+.|++ ++|||||
T Consensus       118 ~~vn~~~~~~~~~~~~~~~~~----------~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ltr~lA~Ela-~~gIrVN  186 (256)
T 4fs3_A          118 QDISSYSLTIVAHEAKKLMPE----------GGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLG-PDNIRVN  186 (256)
T ss_dssp             HHHHTHHHHHHHHHHHTTCTT----------CEEEEEEECGGGTSCCTTTHHHHHHHHHHHHHHHHHHHHHG-GGTEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHhcc----------CCEEEEEeccccccCcccchhhHHHHHHHHHHHHHHHHHhC-ccCeEEE
Confidence            999999999999999887654          69999999999999999999999999999999999999999 9999999


Q ss_pred             EEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          156 GIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       156 ~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      +|+||+++|++.......++..+.+....|++|+++|+|+|++++||+|+.++|+||+++.+|||++..
T Consensus       187 ~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~peevA~~v~fL~Sd~a~~iTG~~i~VDGG~~av  255 (256)
T 4fs3_A          187 AISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSGFHAI  255 (256)
T ss_dssp             EEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             EEecCCCCChhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCCEEEECcCHHhc
Confidence            999999999987766666777788888999999999999999999999999999999999999998754

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=2.2e-40  Score=273.36  Aligned_cols=219  Identities=26%  Similarity=0.351  Sum_probs=201.5

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.+++.+.+.++.++.+|++|+++++++++++.+++|++|+||||||+....++.+.+.++|+..+++|+.
T Consensus        36 ~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~  115 (258)
T 3oid_A           36 ARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAK  115 (258)
T ss_dssp             SSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTH
T ss_pred             CCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            68899999999999988889999999999999999999999999999999999999888888999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      ++++++++++|+|++++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||+
T Consensus       116 g~~~~~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~  186 (258)
T 3oid_A          116 ALLFCAQEAAKLMEKNG--------GGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELS-PKQIIVNAVSGGA  186 (258)
T ss_dssp             HHHHHHHHHHHHHHTTT--------CEEEEEEEEGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEECC
T ss_pred             HHHHHHHHHHHHHHhcC--------CcEEEEECchhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-hcCcEEEEEeeCC
Confidence            99999999999999876        79999999999999999999999999999999999999999 8999999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCC
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDL  229 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~  229 (257)
                      ++|++........+.........|.+++.+|+|+|++++||+++.+++++|+++.+|||..+..+.+-
T Consensus       187 v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~  254 (258)
T 3oid_A          187 IDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQTIIVDGGRSLLVLEHH  254 (258)
T ss_dssp             BCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHHHHHHHHHHHTSSTTTTCCSCEEEESTTGGGBCC---
T ss_pred             CcChhhhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCCccCCEEEECCCccCCCCCCC
Confidence            99998765544455666777788999999999999999999999999999999999999988766543

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=1.7e-40  Score=273.33  Aligned_cols=192  Identities=19%  Similarity=0.272  Sum_probs=170.6

Q ss_pred             eEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC--CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        22 ~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      ...+++|++++++++.+++++.+++|+||++|||||+..  ..++.+.+.++|++.+++|+.++++++|+++|+|++++ 
T Consensus        52 ~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-  130 (261)
T 4h15_A           52 ELFVEADLTTKEGCAIVAEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARG-  130 (261)
T ss_dssp             TTEEECCTTSHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-
T ss_pred             EEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcC-
Confidence            346799999999999999999999999999999999754  35789999999999999999999999999999999987 


Q ss_pred             CCCCCCCCceEEEEcccccccccc-cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCC--------
Q 025124          100 GQASSSSGGIIINISATLHYTATW-YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK--------  170 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~~~~-~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~--------  170 (257)
                             .|+||++||..+..+.+ +...|+++|+|+.+|+|+++.|++ ++|||||+|+||+++|++....        
T Consensus       131 -------~G~Iv~isS~~~~~~~~~~~~~Y~asKaal~~lt~~lA~Ela-~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~  202 (261)
T 4h15_A          131 -------SGVVVHVTSIQRVLPLPESTTAYAAAKAALSTYSKAMSKEVS-PKGVRVVRVSPGWIETEASVRLAERLAKQA  202 (261)
T ss_dssp             -------CEEEEEECCGGGTSCCTTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCCHHHHHHHHHHHHHT
T ss_pred             -------CceEEEEEehhhccCCCCccHHHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEeCCCcCCcchhhhhHHHHHhh
Confidence                   79999999999998876 678999999999999999999999 9999999999999999864321        


Q ss_pred             -CCh---HHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          171 -LAP---EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       171 -~~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                       ...   .+.........|++|+++|||+|+.++||+|+.++|+||+.+.+|||..
T Consensus       203 ~~~~~~~~~~~~~~~~~~PlgR~g~peevA~~v~fLaS~~a~~itG~~i~VDGG~v  258 (261)
T 4h15_A          203 GTDLEGGKKIIMDGLGGIPLGRPAKPEEVANLIAFLASDRAASITGAEYTIDGGTV  258 (261)
T ss_dssp             TCCHHHHHHHHHHHTTCCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCS
T ss_pred             ccchhhHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcCccCcEEEECCcCc
Confidence             111   2233344566799999999999999999999999999999999999964

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=6.5e-40  Score=272.34  Aligned_cols=214  Identities=25%  Similarity=0.376  Sum_probs=196.6

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|+.++++++.+++.+.+.++.++.+|++|+++++++++++.++++++|+||||||+....++.+.+.++|++.+++|+
T Consensus        56 ~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~  135 (271)
T 4ibo_A           56 NGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNL  135 (271)
T ss_dssp             CCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             EeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHh
Confidence            47999999999999998888999999999999999999999999999999999999998888899999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .|+++++++++|.|.+++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||
T Consensus       136 ~g~~~l~~~~~~~~~~~~--------~g~iV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG  206 (271)
T 4ibo_A          136 TSAFMIGREAAKRMIPRG--------YGKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMAAEWA-QYGIQANAIGPG  206 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHhcC--------CcEEEEEccHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHh-hhCeEEEEEEec
Confidence            999999999999999876        79999999999999999999999999999999999999999 899999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +++|++........+.........|.+++.+|+|+|++++||+++.+++++|+.+.+|||...
T Consensus       207 ~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~  269 (271)
T 4ibo_A          207 YMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLSASASDYVNGQIIYVDGGMLS  269 (271)
T ss_dssp             SBCSGGGHHHHHCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cEeCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCcEEEECCCeec
Confidence            999987543222234455566778899999999999999999999999999999999999764

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=1.6e-39  Score=267.81  Aligned_cols=212  Identities=33%  Similarity=0.468  Sum_probs=194.5

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|+.++++++.+++.+.+.++.++.+|++|+++++++++++.+++|++|++|||||+....++ +.+.++|+.++++|+
T Consensus        42 ~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~-~~~~~~~~~~~~vN~  120 (256)
T 3gaf_A           42 TDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPF-DMPMSDFEWAFKLNL  120 (256)
T ss_dssp             EESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHT
T ss_pred             EeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHHh
Confidence            3688999999999999888899999999999999999999999999999999999998877777 899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .++++++++++|+|++++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||
T Consensus       121 ~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG  191 (256)
T 3gaf_A          121 FSLFRLSQLAAPHMQKAG--------GGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVG-PMGIRVNAIAPG  191 (256)
T ss_dssp             HHHHHHHHHHHHHHHHTT--------CEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHhcC--------CcEEEEEcCHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHh-hhCcEEEEEEEc
Confidence            999999999999999876        79999999999999999999999999999999999999999 899999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +++|++..... ..+....+....|++++.+|+|+|++++||+++.+.+++|+.+.+|||...
T Consensus       192 ~v~T~~~~~~~-~~~~~~~~~~~~p~~r~~~~~dva~~~~~L~s~~~~~itG~~i~vdgG~~~  253 (256)
T 3gaf_A          192 AIKTDALATVL-TPEIERAMLKHTPLGRLGEAQDIANAALFLCSPAAAWISGQVLTVSGGGVQ  253 (256)
T ss_dssp             CBCCHHHHHHC-CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCC
T ss_pred             cccCchhhhcc-CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCcccCccCCEEEECCCccc
Confidence            99998754322 244455666778899999999999999999999999999999999999764

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.1e-39  Score=270.35  Aligned_cols=215  Identities=25%  Similarity=0.338  Sum_probs=195.7

Q ss_pred             CCCcHHHHHHHHHHHHh-cCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~-~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      ++|+.++++++.+++.+ .+.++.++.+|++|+++++++++++.+++|++|+||||||+....++.+.+.++|++++++|
T Consensus        50 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N  129 (266)
T 4egf_A           50 SGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVN  129 (266)
T ss_dssp             EESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred             EeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHH
Confidence            36899999999999987 47889999999999999999999999999999999999999888889999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.++++++++++|+|.+++.       .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+|
T Consensus       130 ~~g~~~l~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~-~~gI~vn~v~P  201 (266)
T 4egf_A          130 LRAPALLASAVGKAMVAAGE-------GGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELG-PHGIRANSVCP  201 (266)
T ss_dssp             THHHHHHHHHHHHHHHHHTS-------CEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHhcCC-------CeEEEEEcchhhccCCCCChHHHHHHHHHHHHHHHHHHHHh-hhCeEEEEEEe
Confidence            99999999999999987642       58999999999999999999999999999999999999999 89999999999


Q ss_pred             CcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       160 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      |++.|++..................|++++.+|+|+|++++||+++.+++++|+.+.+|||+.+
T Consensus       202 G~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 4egf_A          202 TVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLASDAASMINGVDIPVDGGYTM  265 (266)
T ss_dssp             SCBCSHHHHHHTCSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCcCchhhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCcEEEECCCccC
Confidence            9999987544333344555666778899999999999999999999999999999999999765

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=3.7e-39  Score=266.59  Aligned_cols=213  Identities=27%  Similarity=0.375  Sum_probs=195.5

Q ss_pred             CCCcHHHHHHHHHHHHhcC-CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~-~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      ++|+.++++++.+++.+.+ .++.++.+|++|+++++++++++.+++|++|++|||||+....++.+.+.++|++++++|
T Consensus        40 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N  119 (262)
T 3pk0_A           40 AGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVN  119 (262)
T ss_dssp             EESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHH
T ss_pred             EeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHh
Confidence            3689999999999998876 689999999999999999999999999999999999998888899999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccc-cccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~-~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      +.++++++++++|+|++++        .|+||++||..+. .+.++...|+++|+++++|+++++.|+. ++||+||+|+
T Consensus       120 ~~g~~~~~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~-~~gi~vn~v~  190 (262)
T 3pk0_A          120 VNGTFYAVQACLDALIASG--------SGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELA-PHKITVNAIM  190 (262)
T ss_dssp             THHHHHHHHHHHHHHHHHS--------SCEEEEECCSBTTTBCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHhcC--------CcEEEEEechhhccCCCCCChhhHHHHHHHHHHHHHHHHHHH-hhCcEEEEEE
Confidence            9999999999999999876        7999999999886 7888999999999999999999999999 8999999999


Q ss_pred             cCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       159 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      ||++.|++....  ..+.........+.+++.+|+|+|++++||+++.+++++|+.+.+|||..+.
T Consensus       191 PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~~  254 (262)
T 3pk0_A          191 PGNIMTEGLLEN--GEEYIASMARSIPAGALGTPEDIGHLAAFLATKEAGYITGQAIAVDGGQVLP  254 (262)
T ss_dssp             ECSBCCHHHHTT--CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTCC
T ss_pred             eCcCcCcccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCeecC
Confidence            999999865432  3455566677788999999999999999999999999999999999998764

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.3e-39  Score=270.68  Aligned_cols=214  Identities=31%  Similarity=0.418  Sum_probs=189.6

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n   79 (257)
                      ++|+.++++++.+++.+.+.++.++.+|++|+++++++++++.+++|++|++|||||+... .++.+.+.++|++++++|
T Consensus        58 ~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN  137 (283)
T 3v8b_A           58 LGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVN  137 (283)
T ss_dssp             EESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHH
T ss_pred             EeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHH
Confidence            3689999999999998888899999999999999999999999999999999999998654 889999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccc--ccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEE
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT--ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~--~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v  157 (257)
                      +.|++.++++++|+|++++        .|+||++||..+..  +.++...|+++|+|+++|+++++.|++ ++||+||+|
T Consensus       138 ~~g~~~l~~~~~~~m~~~~--------~g~Iv~isS~~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v  208 (283)
T 3v8b_A          138 LRGTFLTLHLTVPYLKQRG--------GGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELG-KHHIRVNAV  208 (283)
T ss_dssp             THHHHHHHHHHHHHHHHHT--------CEEEEEECCSBTTTBCCSTTCHHHHHHHHHHHHHHHHHHHHTT-TTTEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHcC--------CceEEEEcChhhccCCCCCCchHHHHHHHHHHHHHHHHHHHhC-ccCcEEEEE
Confidence            9999999999999999876        79999999999877  778899999999999999999999999 899999999


Q ss_pred             ecCcccCCCCCCCCChHHH-----HHHhhhhccC--CCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          158 APGPIKDTAGVSKLAPEEI-----RSKATDYMAA--YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       158 ~Pg~v~t~~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +||+++|++..........     ........|.  +++.+|+|+|++++||+++.+++++|+++.+|||..+
T Consensus       209 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~~  281 (283)
T 3v8b_A          209 CPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSERARHVTGSPVWIDGGQGL  281 (283)
T ss_dssp             EECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             EeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHHHHHHcCccccCCcCCEEEECcCccc
Confidence            9999999986543222221     1122233455  7889999999999999999999999999999999764

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=1.1e-38  Score=261.46  Aligned_cols=210  Identities=26%  Similarity=0.395  Sum_probs=194.1

Q ss_pred             CcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHH
Q 025124            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG   82 (257)
Q Consensus         3 r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~   82 (257)
                      |+.++++++.+++.+.+.++.++.+|++|.++++++++++.+++|++|++|||||+....++.+.+.++|++.+++|+.|
T Consensus        37 ~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g  116 (246)
T 3osu_A           37 GSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKG  116 (246)
T ss_dssp             SCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHH
T ss_pred             CCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHH
Confidence            46788999999999888899999999999999999999999999999999999998888889999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcc
Q 025124           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (257)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v  162 (257)
                      +++++++++|+|++++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||++|+|+||++
T Consensus       117 ~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v  187 (246)
T 3osu_A          117 VFNCIQKATPQMLRQR--------SGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELA-SRGITVNAVAPGFI  187 (246)
T ss_dssp             HHHHHHHHHHHHHHHT--------CEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSB
T ss_pred             HHHHHHHHHHHHHHcC--------CCEEEEEcchhhcCCCCCChHHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEECCC
Confidence            9999999999999876        79999999999999999999999999999999999999999 89999999999999


Q ss_pred             cCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          163 KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       163 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      .|++....  .+..........|.+++.+|+|+|++++||+++.+.+++|+++.+|||+++
T Consensus       188 ~t~~~~~~--~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdgG~~~  246 (246)
T 3osu_A          188 VSDMTDAL--SDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGGMYM  246 (246)
T ss_dssp             GGGCCSCS--CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTSCC
T ss_pred             cCCccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCCccC
Confidence            99875432  345556667778899999999999999999999999999999999999753

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=2.5e-39  Score=268.01  Aligned_cols=215  Identities=21%  Similarity=0.247  Sum_probs=190.3

Q ss_pred             CCCcHHHHHHHHHHHHh-cCC-CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHS-LGI-PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI   78 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~-~~~-~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~   78 (257)
                      ++|+.++++++.+++.+ .+. ++.++.+|++|+++++++++++.+++|++|++|||||+....++.+.+.++|++.+++
T Consensus        38 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~  117 (265)
T 3lf2_A           38 CARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQL  117 (265)
T ss_dssp             EESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred             EeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence            36899999999999987 333 5999999999999999999999999999999999999988889999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      |+.++++++++++|+|++++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+
T Consensus       118 N~~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~  188 (265)
T 3lf2_A          118 KFFSVIHPVRAFLPQLESRA--------DAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFA-PKGVRVNGIL  188 (265)
T ss_dssp             HHHHHHHHHHHHHHHHTTST--------TEEEEEEEEGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHhhccC--------CeEEEEECCcccCCCCCCchhhHHHHHHHHHHHHHHHHHhc-ccCeEEEEEE
Confidence            99999999999999999876        79999999999999999999999999999999999999999 8999999999


Q ss_pred             cCcccCCCCCCCC--------ChHHHHHHhhh--hccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          159 PGPIKDTAGVSKL--------APEEIRSKATD--YMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       159 Pg~v~t~~~~~~~--------~~~~~~~~~~~--~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      ||+++|++.....        ...........  ..|++++.+|+|+|++++||+++.+++++|+++.+|||++..
T Consensus       189 PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~~  264 (265)
T 3lf2_A          189 IGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAILFLASPLSAYTTGSHIDVSGGLSRH  264 (265)
T ss_dssp             ECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESSSCCCC
T ss_pred             eCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHHHHHHHHHHHhCchhcCcCCCEEEECCCCcCC
Confidence            9999998643211        11122222222  278899999999999999999999999999999999998653

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=3.3e-39  Score=269.51  Aligned_cols=222  Identities=27%  Similarity=0.408  Sum_probs=199.0

Q ss_pred             CCCcHHHHHHHHHHHHhcCC---CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCC-CCCCCCCCCCHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGI---PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG-NFLVPAEDLSPNGFRTVI   76 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~---~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~-~~~~~~~~~~~~~~~~~~   76 (257)
                      ++|++++++++.+++.+.+.   ++.++.+|++|+++++++++++.+++|++|++|||||+ ....++.+.+.++|++.+
T Consensus        41 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~  120 (281)
T 3svt_A           41 VGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTV  120 (281)
T ss_dssp             EESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHH
T ss_pred             EeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHH
Confidence            36899999999999988765   78999999999999999999999999999999999997 555788899999999999


Q ss_pred             HHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEE
Q 025124           77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (257)
Q Consensus        77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~  156 (257)
                      ++|+.|+++++++++|.|.+++        .|+||++||..+..+.++...|++||+++++|+++++.|++ ++||+||+
T Consensus       121 ~vN~~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~-~~gi~vn~  191 (281)
T 3svt_A          121 DLNVNGTMYVLKHAAREMVRGG--------GGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELG-ASWVRVNS  191 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTT--------CEEEEEECCHHHHSCCTTCTHHHHHHHHHHHHHHHHHHHHG-GGTEEEEE
T ss_pred             HHhhHHHHHHHHHHHHHHHhcC--------CcEEEEEeCHHHcCCCCCChhHHHHHHHHHHHHHHHHHHhh-hcCeEEEE
Confidence            9999999999999999999876        79999999999999999999999999999999999999999 89999999


Q ss_pred             EecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcH
Q 025124          157 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPK  231 (257)
Q Consensus       157 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~  231 (257)
                      |+||+++|++........+....+....+++++.+|+|+|+++++|+++.+++++|+.+.+|||..+...+.+.+
T Consensus       192 v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~  266 (281)
T 3svt_A          192 IRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSA  266 (281)
T ss_dssp             EEECSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHH
T ss_pred             EEeCcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcccCCcchh
Confidence            999999998764332334455666777889999999999999999999999999999999999988875444433

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=8.1e-39  Score=266.87  Aligned_cols=217  Identities=28%  Similarity=0.366  Sum_probs=196.0

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC-CCCCCCCCCHHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n   79 (257)
                      ++|+.++++++.+++.+.+.++.++.+|++|+++++++++++.+++|++|+||||||+. ...++.+.+.++|++.+++|
T Consensus        38 ~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN  117 (280)
T 3tox_A           38 TARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTN  117 (280)
T ss_dssp             CCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHH
Confidence            47999999999999988788999999999999999999999999999999999999976 45788899999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccc-cccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~-~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      +.|+++++++++|.|.+++        .|+||++||..+. .+.++...|+++|+|+++|+++++.|+. ++||+||+|+
T Consensus       118 ~~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gIrvn~v~  188 (280)
T 3tox_A          118 LTSAFLAAKYQVPAIAALG--------GGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELG-ARGIRVNALL  188 (280)
T ss_dssp             THHHHHHHHHHHHHHHHTT--------CEEEEEECCSBTTTBCCTTCHHHHHHHHHHHHHHHHHHHHHH-TTTEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHcC--------CCEEEEEcChhhCcCCCCCchhHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEE
Confidence            9999999999999999876        7999999999988 6788899999999999999999999999 8999999999


Q ss_pred             cCcccCCCCCCCC--ChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCC
Q 025124          159 PGPIKDTAGVSKL--APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNP  226 (257)
Q Consensus       159 Pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~  226 (257)
                      ||++.|++.....  ...+.........+++++.+|+|+|++++||+++.+++++|+++.+|||..+..+
T Consensus       189 PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~~~  258 (280)
T 3tox_A          189 PGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASDGASFVTGAALLADGGASVTKA  258 (280)
T ss_dssp             ECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC-
T ss_pred             ECCCCCchhhhhccccCHHHHHHHhccCccCCCcCHHHHHHHHHHHhCccccCCcCcEEEECCCcccccc
Confidence            9999999865422  2244455566777889999999999999999999999999999999999888654

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=2.7e-39  Score=266.64  Aligned_cols=220  Identities=41%  Similarity=0.621  Sum_probs=192.8

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|++++++++.+++.+.+.++.++.+|++|+++++++++++.+++|++|+||||||+....++.+.+.++|++++++|+
T Consensus        36 ~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~  115 (257)
T 3imf_A           36 TGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVL  115 (257)
T ss_dssp             EESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHH
T ss_pred             EeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHh
Confidence            36899999999999988788999999999999999999999999999999999999988888899999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .++++++++++|+|.++..       .|+||++||..+..+.++...|+++|+|+++|+++++.|+..++||+||+|+||
T Consensus       116 ~g~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG  188 (257)
T 3imf_A          116 NGTFYCSQAIGKYWIEKGI-------KGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPG  188 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHTC-------CCEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHhhCC-------CcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEEC
Confidence            9999999999999965431       689999999999999999999999999999999999999852459999999999


Q ss_pred             cccCCCCCCCC-ChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCC
Q 025124          161 PIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPR  227 (257)
Q Consensus       161 ~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~  227 (257)
                      +++|++..... ...+.........|.+++.+|+|+|+.++||+++.+.+++|+++.+|||..+...+
T Consensus       189 ~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~  256 (257)
T 3imf_A          189 PIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAAYINGTCMTMDGGQHLHQYP  256 (257)
T ss_dssp             CBSSCCCC-------CCSHHHHTTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTSCCCC
T ss_pred             CCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCcccCCCC
Confidence            99998764432 11223344556678889999999999999999999999999999999998876543

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=4.9e-39  Score=266.89  Aligned_cols=212  Identities=30%  Similarity=0.396  Sum_probs=194.7

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|+.++++++.+++.+.+.++.++.+|++|.++++++++++.+++|++|+||||||+....++.+.+.++|++.+++|+
T Consensus        58 ~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~  137 (270)
T 3ftp_A           58 TATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNL  137 (270)
T ss_dssp             EESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHT
T ss_pred             EeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhh
Confidence            36889999999999988888999999999999999999999999999999999999988888899999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .|+++++++++|.|.+++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||
T Consensus       138 ~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG  208 (270)
T 3ftp_A          138 KAVFRLSRAVLRPMMKAR--------GGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIG-SRGITVNCVAPG  208 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CEEEEEECCHHHHHCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHcC--------CCEEEEECchhhCCCCCCchhHHHHHHHHHHHHHHHHHHHh-hhCeEEEEEEeC
Confidence            999999999999999876        79999999999999999999999999999999999999999 899999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +++|++....  ..+.........+++++.+|+|+|++++||+++.+.+++|+++.+|||+.+
T Consensus       209 ~v~T~~~~~~--~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  269 (270)
T 3ftp_A          209 FIDTDMTKGL--PQEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGTTLHVNGGMFM  269 (270)
T ss_dssp             SBCSHHHHHS--CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             CCcCcchhhc--CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCCCcCCccCcEEEECCCccc
Confidence            9999865332  234445566677889999999999999999999999999999999999764

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=6.2e-39  Score=265.51  Aligned_cols=213  Identities=22%  Similarity=0.320  Sum_probs=193.4

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC-CCCCCCCCCHHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n   79 (257)
                      ++|+.++++++.+++.+.+.++.++.+|++|+++++++++++.+++|++|++|||||.. ...++.+.+.++|++++++|
T Consensus        41 ~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N  120 (264)
T 3ucx_A           41 AARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELT  120 (264)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHH
T ss_pred             EeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHH
Confidence            36899999999999998888999999999999999999999999999999999999975 56788899999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.++++++++++|.|.++         +|+||++||..+..+.+++..|+++|+|+++|+++++.|+. ++||+||+|+|
T Consensus       121 ~~g~~~~~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~P  190 (264)
T 3ucx_A          121 VFGALRLIQGFTPALEES---------KGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELG-EKGIRVNSVLP  190 (264)
T ss_dssp             THHHHHHHHHTHHHHHHH---------TCEEEEECCGGGGCCCTTCHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHc---------CCEEEEECcchhccCCCccHHHHHHHHHHHHHHHHHHHHhC-ccCeEEEEEec
Confidence            999999999999999876         58999999999999999999999999999999999999999 89999999999


Q ss_pred             CcccCCCCCCCC---------ChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          160 GPIKDTAGVSKL---------APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       160 g~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      |++.|++.....         ..++.........+.+++.+|+|+|++++||+++.+++++|+++.+|||.++
T Consensus       191 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  263 (264)
T 3ucx_A          191 GYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMASDLASGITGQALDVNCGEYK  263 (264)
T ss_dssp             SSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             CccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHHHHHHHHcCccccCCCCCEEEECCCccC
Confidence            999998653221         1234455566778899999999999999999999999999999999999865

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=1.6e-38  Score=260.75  Aligned_cols=208  Identities=26%  Similarity=0.342  Sum_probs=189.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|++++++++.+++..   +...+.+|++|+++++++++++.+++|++|++|||||+....++.+.+.++|++.+++|+.
T Consensus        40 ~r~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~  116 (248)
T 3op4_A           40 ATSESGAQAISDYLGD---NGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLT  116 (248)
T ss_dssp             ESSHHHHHHHHHHHGG---GEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTH
T ss_pred             eCCHHHHHHHHHHhcc---cceEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhH
Confidence            6888888888777754   4788999999999999999999999999999999999988888999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      |+++++++++|+|.+++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||+
T Consensus       117 g~~~~~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~-~~gi~vn~v~PG~  187 (248)
T 3op4_A          117 SIFRLSKAVLRGMMKKR--------QGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVA-SRGVTVNTVAPGF  187 (248)
T ss_dssp             HHHHHHHHHHHHHHHHT--------CEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECS
T ss_pred             HHHHHHHHHHHHHHHcC--------CCEEEEEcchhhcCCCCCChHHHHHHHHHHHHHHHHHHHHH-HhCeEEEEEeeCC
Confidence            99999999999999876        79999999999999999999999999999999999999999 8999999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +.|++....  ..+.........|.+++.+|+|+|++++||+++.+.+++|+.+.+|||+++
T Consensus       188 v~T~~~~~~--~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdgG~~~  247 (248)
T 3op4_A          188 IETDMTKAL--NDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGGMYM  247 (248)
T ss_dssp             BSSTTTTTS--CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             CCCchhhhc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCCeec
Confidence            999876432  244455566778889999999999999999999999999999999999764

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=3.5e-38  Score=263.84  Aligned_cols=213  Identities=26%  Similarity=0.360  Sum_probs=186.8

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCC-CCCCCCHHHHHHHHHHHh
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV-PAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~n~   80 (257)
                      +|+.++++++.+++...+.++.++.+|++|+++++++++++.+++|+||+||||||+.... ++.+.+.++|++++++|+
T Consensus        58 ~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~  137 (286)
T 3uve_A           58 ASTPEDLAETADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINL  137 (286)
T ss_dssp             CCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHT
T ss_pred             cCCHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhh
Confidence            3558899999999988888999999999999999999999999999999999999987665 488899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .++++++++++|+|.+++.       .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||
T Consensus       138 ~g~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gI~vn~v~PG  209 (286)
T 3uve_A          138 AGVWKTVKAGVPHMIAGGR-------GGSIILTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELG-QHMIRVNSVHPT  209 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHTS-------CEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEES
T ss_pred             HHHHHHHHHHHHHHHhCCC-------CcEEEEECchhhccCCCCccHHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecC
Confidence            9999999999999987642       58999999999999999999999999999999999999999 899999999999


Q ss_pred             cccCCCCCCC------------CChHHHHH--HhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          161 PIKDTAGVSK------------LAPEEIRS--KATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       161 ~v~t~~~~~~------------~~~~~~~~--~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +++|++....            ........  ......| +++.+|+|+|++++||+++.+++++|+++.+|||+++
T Consensus       210 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l  285 (286)
T 3uve_A          210 HVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTLP-IPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL  285 (286)
T ss_dssp             SBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHTTCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cccCCcccccchhhhccccccccchhhHHHHHHhhhccC-CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence            9999986421            11111111  1233345 7889999999999999999999999999999999865

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=5.6e-39  Score=267.80  Aligned_cols=214  Identities=24%  Similarity=0.338  Sum_probs=195.2

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|+.++++++.+++.+.+.++.++.+|++|.++++++++++.+++|++|+||||||+....++.+.+.++|++.+++|+
T Consensus        54 ~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~  133 (279)
T 3sju_A           54 CARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNL  133 (279)
T ss_dssp             EESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHT
T ss_pred             EeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHh
Confidence            36899999999999998888999999999999999999999999999999999999988888889999999999999999


Q ss_pred             HHHHHHHHHHHH--HHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124           81 VGTFIMCHEALK--YLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus        81 ~~~~~l~~~~~~--~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      .|++.++++++|  .|.+++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+
T Consensus       134 ~g~~~l~~~~~~~~~~~~~~--------~g~iV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~  204 (279)
T 3sju_A          134 TGVFRVTREVLRAGGMREAG--------WGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELA-KTGITVNAVC  204 (279)
T ss_dssp             HHHHHHHHHHHHHSSHHHHT--------CEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEE
T ss_pred             HHHHHHHHHHhchhhHhhcC--------CcEEEEECChhhccCCCCChhHHHHHHHHHHHHHHHHHHHH-hhCcEEEEEe
Confidence            999999999999  577766        79999999999999999999999999999999999999999 8999999999


Q ss_pred             cCcccCCCCCCC---------CChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          159 PGPIKDTAGVSK---------LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       159 Pg~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ||+++|++....         ....+....+....+.+++.+|+|+|++++||+++.+.+++|+.+.+|||+..
T Consensus       205 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~  278 (279)
T 3sju_A          205 PGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLVTDAAASITAQALNVCGGLGN  278 (279)
T ss_dssp             ESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSSGGGGCCSCEEEESTTCCC
T ss_pred             eCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCcCCcEEEECCCccC
Confidence            999999864321         12345566677778899999999999999999999999999999999999764

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=6.2e-38  Score=263.97  Aligned_cols=213  Identities=27%  Similarity=0.385  Sum_probs=186.4

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCC-CCCCCHHHHHHHHHHHh
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP-AEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~-~~~~~~~~~~~~~~~n~   80 (257)
                      +|+.++++++.+++.+.+.++.++.+|++|+++++++++++.+++|+||+||||||+..... +.+.+.++|+.++++|+
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~  150 (299)
T 3t7c_A           71 MSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNL  150 (299)
T ss_dssp             CCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHT
T ss_pred             ccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhh
Confidence            35688999999999988899999999999999999999999999999999999999876654 88999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .|+++++++++|.|.+++.       .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||
T Consensus       151 ~g~~~l~~~~~~~~~~~~~-------~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG  222 (299)
T 3t7c_A          151 NGAWITARVAIPHIMAGKR-------GGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRTMALELG-PRNIRVNIVCPS  222 (299)
T ss_dssp             HHHHHHHHHHHHHHHHTTS-------CEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEES
T ss_pred             HHHHHHHHHHHHHHHhcCC-------CcEEEEECChhhccCCCCcchHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEecC
Confidence            9999999999999987542       68999999999999999999999999999999999999999 899999999999


Q ss_pred             cccCCCCCCCC------------ChHHH--HHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          161 PIKDTAGVSKL------------APEEI--RSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       161 ~v~t~~~~~~~------------~~~~~--~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +++|++.....            .....  ........+ +++.+|+|+|++++||+++.+++++|+++.+|||.++
T Consensus       223 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l  298 (299)
T 3t7c_A          223 SVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLP-IPYVEPADISNAILFLVSDDARYITGVSLPVDGGALL  298 (299)
T ss_dssp             CBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CccCccccccchhhhhhhhhccchhhHHHHHhhhhcccC-cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCccc
Confidence            99999864210            00111  111223334 6788999999999999999999999999999999865

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=2.7e-38  Score=262.45  Aligned_cols=208  Identities=27%  Similarity=0.409  Sum_probs=189.2

Q ss_pred             CcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHH
Q 025124            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG   82 (257)
Q Consensus         3 r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~   82 (257)
                      |+.+.++++.+++.+.+.++.++.+|++|+++++++++++.+++|++|++|||||+....++.+.+.++|++++++|+.|
T Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g  130 (270)
T 3is3_A           51 NSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRG  130 (270)
T ss_dssp             SCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHH
T ss_pred             CCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHH
Confidence            56778899999999888999999999999999999999999999999999999999888889999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccc-cccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATL-HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~-~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++++++++|+|.+          .|+||++||.. ...+.++...|+++|+|+++|+++++.|+. ++||+||+|+||+
T Consensus       131 ~~~~~~~~~~~~~~----------~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~  199 (270)
T 3is3_A          131 QFFVAREAYRHLTE----------GGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCG-DKKITVNAVAPGG  199 (270)
T ss_dssp             HHHHHHHHHHHCCT----------TCEEEEECCTTTTTCCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECS
T ss_pred             HHHHHHHHHHHHhc----------CCeEEEEeCchhccCCCCCCchhHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEeCC
Confidence            99999999999965          58899999988 567888899999999999999999999999 8999999999999


Q ss_pred             ccCCCCCC----------CCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          162 IKDTAGVS----------KLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       162 v~t~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                      ++|++...          ....+..........|++++.+|+|+|++++||+++.+++++|+++.+|||.
T Consensus       200 v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  269 (270)
T 3is3_A          200 TVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGGA  269 (270)
T ss_dssp             BCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             ccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCccCcEEEeCCCC
Confidence            99997541          2233455556667789999999999999999999999999999999999996

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=5.5e-39  Score=267.59  Aligned_cols=217  Identities=41%  Similarity=0.673  Sum_probs=194.7

Q ss_pred             CCCcHHHHHHHHHHHHhc-CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      ++|+.++++++.+++.+. +.++.++.+|++|+++++++++++.+++|++|+||||||+....++.+.+.++|++++++|
T Consensus        57 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N  136 (277)
T 4fc7_A           57 ASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDID  136 (277)
T ss_dssp             EESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred             EeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHh
Confidence            368888999988888654 7789999999999999999999999999999999999998888888999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.++++++++++|.|.+++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+|
T Consensus       137 ~~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~P  207 (277)
T 4fc7_A          137 TSGTFNVSRVLYEKFFRDH--------GGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWG-PQNIRVNSLAP  207 (277)
T ss_dssp             THHHHHHHHHHHHHTHHHH--------CEEEEEECCSHHHHTCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHcC--------CCEEEEECchhhCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEE
Confidence            9999999999999998766        79999999999999999999999999999999999999999 89999999999


Q ss_pred             CcccCCCCCCCC-ChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCC
Q 025124          160 GPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNP  226 (257)
Q Consensus       160 g~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~  226 (257)
                      |++.|++..... .............|++++.+|+|+|++++||+++.+++++|+++.+|||.++..+
T Consensus       208 G~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~~~~itG~~i~vdGG~~~~~~  275 (277)
T 4fc7_A          208 GPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYLASPLASYVTGAVLVADGGAWLTFP  275 (277)
T ss_dssp             CCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHCC
T ss_pred             CCEecchhhhhccCCHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCCccCCcCCCEEEECCCcccCCC
Confidence            999998643221 1234455666778899999999999999999999999999999999999876543

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=1.4e-38  Score=266.96  Aligned_cols=213  Identities=28%  Similarity=0.348  Sum_probs=194.3

Q ss_pred             CCCcHHHHHHHHHHHHhcC-CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~-~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      ++|+.++++++.+++.+.+ .++.++.+|++|+++++++++++.+++|++|+||||||+....++.+.+.++|++.+++|
T Consensus        71 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN  150 (293)
T 3rih_A           71 AARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVN  150 (293)
T ss_dssp             EESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHH
Confidence            3688889999999998776 689999999999999999999999999999999999999888889999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccc-cccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~-~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      +.|+++++++++|.|++++        .|+||++||..+. .+.++...|+++|+++++|+++++.|+. ++||+||+|+
T Consensus       151 ~~g~~~l~~~~~~~m~~~~--------~g~iV~isS~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~  221 (293)
T 3rih_A          151 VKGTVYTVQACLAPLTASG--------RGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELA-PRGVTVNAIL  221 (293)
T ss_dssp             THHHHHHHHHTHHHHHHHS--------SCEEEEECCSBTTTBBCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHcC--------CCEEEEEeChhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHh-hhCeEEEEEe
Confidence            9999999999999999876        7999999999886 7888999999999999999999999999 8999999999


Q ss_pred             cCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       159 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      ||++.|++....  ..+.........+.+++.+|+|+|+.++||+++.+.+++|+++.+|||..+.
T Consensus       222 PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~~~  285 (293)
T 3rih_A          222 PGNILTEGLVDM--GEEYISGMARSIPMGMLGSPVDIGHLAAFLATDEAGYITGQAIVVDGGQVLP  285 (293)
T ss_dssp             ECSBCCHHHHHT--CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTCB
T ss_pred             cCCCcCcchhhc--cHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccCC
Confidence            999999865322  2345556667788999999999999999999999999999999999998774

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=6.5e-38  Score=260.04  Aligned_cols=206  Identities=28%  Similarity=0.388  Sum_probs=190.1

Q ss_pred             cHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHH
Q 025124            4 RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT   83 (257)
Q Consensus         4 ~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~   83 (257)
                      +.+.++++.+++.+.+.++.++.+|++|+++++++++++.+++|++|+||||||+....++.+.+.++|++++++|+.|+
T Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~  141 (269)
T 4dmm_A           62 SAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGV  141 (269)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHH
T ss_pred             ChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHH
Confidence            77888999999988888999999999999999999999999999999999999988888889999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccc
Q 025124           84 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK  163 (257)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~  163 (257)
                      ++++++++|+|.+++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||+++
T Consensus       142 ~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~-~~gi~vn~v~PG~v~  212 (269)
T 4dmm_A          142 FLCSRAAAKIMLKQR--------SGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELA-SRGITVNAVAPGFIA  212 (269)
T ss_dssp             HHHHHHHHHHHHHHT--------CCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBT
T ss_pred             HHHHHHHHHHHHHcC--------CcEEEEECchhhcCCCCCchhHHHHHHHHHHHHHHHHHHHh-hhCcEEEEEEECCCc
Confidence            999999999999876        79999999999999999999999999999999999999999 899999999999999


Q ss_pred             CCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccC-CCCcccCcEEEecCCccc
Q 025124          164 DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD-AGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       164 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~-~~~~~~G~~~~~dgg~~~  223 (257)
                      |++..     ...........+.+++.+|+|+|++++||+++ .+.+++|+++.+|||+.+
T Consensus       213 T~~~~-----~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG~~~  268 (269)
T 4dmm_A          213 TDMTS-----ELAAEKLLEVIPLGRYGEAAEVAGVVRFLAADPAAAYITGQVINIDGGLVM  268 (269)
T ss_dssp             TSCSC-----HHHHHHHGGGCTTSSCBCHHHHHHHHHHHHHCGGGGGCCSCEEEESTTSCC
T ss_pred             Ccccc-----cccHHHHHhcCCCCCCCCHHHHHHHHHHHhCCcccCCCcCCEEEECCCeec
Confidence            98653     22234566777889999999999999999997 788999999999999765

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=2.8e-38  Score=261.76  Aligned_cols=208  Identities=26%  Similarity=0.331  Sum_probs=177.4

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.+++   +.++.++.+|++|+++++++++++.++++++|+||||||+....++.+.+.++|++++++|+.
T Consensus        58 ~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~  134 (266)
T 3grp_A           58 GTREDKLKEIAADL---GKDVFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLT  134 (266)
T ss_dssp             ESCHHHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTH
T ss_pred             eCCHHHHHHHHHHh---CCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHH
Confidence            57888887776554   678999999999999999999999999999999999999888888899999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      |++.++++++|.|.+++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||+
T Consensus       135 g~~~l~~~~~~~~~~~~--------~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gI~vn~v~PG~  205 (266)
T 3grp_A          135 AASTLTRELIHSMMRRR--------YGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIA-SRNITVNCIAPGF  205 (266)
T ss_dssp             HHHHHHHHHHHHHHHHT--------CEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECS
T ss_pred             HHHHHHHHHHHHHHHcC--------CcEEEEECCHHHcCCCCCchhHHHHHHHHHHHHHHHHHHhh-hhCcEEEEEeeCc
Confidence            99999999999999876        79999999999999999999999999999999999999999 8999999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +.|++....  ............|.+++.+|+|+|++++||+++.+++++|+++.+|||+.+
T Consensus       206 v~t~~~~~~--~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 3grp_A          206 IKSAMTDKL--NEKQKEAIMAMIPMKRMGIGEEIAFATVYLASDEAAYLTGQTLHINGGMAM  265 (266)
T ss_dssp             BCSHHHHTC--CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC--
T ss_pred             CCCchhhcc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCeee
Confidence            999875432  344556667778899999999999999999999999999999999999764

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=2.4e-38  Score=259.52  Aligned_cols=211  Identities=27%  Similarity=0.350  Sum_probs=186.3

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|+.++++++.+++   +.++.++.+|++|+++++++++++.+++|++|++|||||+....++.+.+.++|++++++|+
T Consensus        36 ~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~  112 (247)
T 3rwb_A           36 SDINAEGAKAAAASI---GKKARAIAADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNL  112 (247)
T ss_dssp             ECSCHHHHHHHHHHH---CTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             EeCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhh
Confidence            368888888877776   67899999999999999999999999999999999999988888899999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .++++++++++|+|++++.       .|+||++||..+..+.+++..|+++|+|+++|+++++.|+. ++||+||+|+||
T Consensus       113 ~g~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG  184 (247)
T 3rwb_A          113 TGTFIVTRAGTDQMRAAGK-------AGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELG-KYNITANAVTPG  184 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHTC-------CEEEEEECCTHHHHTCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHcCC-------CcEEEEECchhhccCCCCchhhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeC
Confidence            9999999999999998642       58999999999999999999999999999999999999999 899999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +++|++..... ............+++++.+|+|+|+.++||+++.+++++|+++.+|||+..
T Consensus       185 ~v~t~~~~~~~-~~~~~~~~~~~~~~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~  246 (247)
T 3rwb_A          185 LIESDGVKASP-HNEAFGFVEMLQAMKGKGQPEHIADVVSFLASDDARWITGQTLNVDAGMVR  246 (247)
T ss_dssp             SBCCHHHHTSG-GGGGHHHHHHHSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             cCcCccccccC-hhHHHHHHhcccccCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            99998654321 111112222336788899999999999999999999999999999999753

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.4e-38  Score=262.29  Aligned_cols=208  Identities=28%  Similarity=0.361  Sum_probs=184.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      .|+.+.++++.+++.+.+.++.++.+|++|+++++++++++.+++|++|+||||||+....++.+.+.++|++.+++|+.
T Consensus        59 ~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~  138 (267)
T 3u5t_A           59 AGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLK  138 (267)
T ss_dssp             SSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHH
Confidence            46778889999999888889999999999999999999999999999999999999988888999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      |+++++++++|.|++          .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||+
T Consensus       139 g~~~~~~~~~~~~~~----------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~  207 (267)
T 3u5t_A          139 GTFNTLREAAQRLRV----------GGRIINMSTSQVGLLHPSYGIYAAAKAGVEAMTHVLSKELR-GRDITVNAVAPGP  207 (267)
T ss_dssp             HHHHHHHHHHHHEEE----------EEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHTT-TSCCEEEEEEECC
T ss_pred             HHHHHHHHHHHHHhh----------CCeEEEEeChhhccCCCCchHHHHHHHHHHHHHHHHHHHhh-hhCCEEEEEEECC
Confidence            999999999999965          58999999999999999999999999999999999999999 8999999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                      ++|++..... ..+....+....|++++.+|+|+|++++||+++.+.+++|+.+.+|||+
T Consensus       208 v~T~~~~~~~-~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  266 (267)
T 3u5t_A          208 TATDLFLEGK-SDEVRDRFAKLAPLERLGTPQDIAGAVAFLAGPDGAWVNGQVLRANGGI  266 (267)
T ss_dssp             BC------------CHHHHHTSSTTCSCBCHHHHHHHHHHHHSTTTTTCCSEEEEESSSC
T ss_pred             CcCccccccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEeCCCc
Confidence            9999764432 2334455667788899999999999999999999999999999999996

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=3.9e-38  Score=262.26  Aligned_cols=212  Identities=23%  Similarity=0.341  Sum_probs=190.9

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|+.++++++.+++.+.+.++.++.+|++|+++++++++++.+++|++|+||||||+....++.+.+.++|++.+++|+
T Consensus        62 ~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~  141 (276)
T 3r1i_A           62 AARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNV  141 (276)
T ss_dssp             EESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             EeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHH
Confidence            36888999999999998888999999999999999999999999999999999999998888889999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccccc--ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~--~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      .++++++++++|.|.+++.       .|+||++||..+..+.  ++...|+++|+|+++|+++++.|+. ++||+||+|+
T Consensus       142 ~g~~~l~~~~~~~m~~~~~-------~g~iv~isS~~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gIrvn~v~  213 (276)
T 3r1i_A          142 TGVFLTAQAAARAMVDQGL-------GGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELA-PHQIRVNSVS  213 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHTS-------CEEEEEECCGGGTSCCCSSCCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHcCC-------CcEEEEECchHhcccCCCCCcchHHHHHHHHHHHHHHHHHHHh-hcCcEEEEEe
Confidence            9999999999999998651       4899999999887664  3578899999999999999999999 8999999999


Q ss_pred             cCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       159 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ||+++|++....   .+....+....+++++.+|+|+|++++||+++.+++++|+.+.+|||.+.
T Consensus       214 PG~v~T~~~~~~---~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~  275 (276)
T 3r1i_A          214 PGYIRTELVEPL---ADYHALWEPKIPLGRMGRPEELTGLYLYLASAASSYMTGSDIVIDGGYTC  275 (276)
T ss_dssp             ECCBCSTTTGGG---GGGHHHHGGGSTTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             eCCCcCCccccc---hHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCcEEEECcCccC
Confidence            999999976432   22344556677889999999999999999999999999999999999754

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=1.8e-37  Score=258.96  Aligned_cols=210  Identities=22%  Similarity=0.293  Sum_probs=185.6

Q ss_pred             HHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHH
Q 025124            5 KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF   84 (257)
Q Consensus         5 ~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~   84 (257)
                      .++++++.+++.+.+.++.++.+|++|+++++++++++.+++|++|+||||||+....++.+.+.++|++++++|+.|++
T Consensus        56 ~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~  135 (281)
T 3s55_A           56 ADDLAETVALVEKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTF  135 (281)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHH
T ss_pred             HHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHH
Confidence            67788888888888889999999999999999999999999999999999999888888999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccC
Q 025124           85 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD  164 (257)
Q Consensus        85 ~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t  164 (257)
                      +++++++|+|.+++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||+++|
T Consensus       136 ~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v~t  206 (281)
T 3s55_A          136 NTIAAVAPGMIKRN--------YGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKCAAHDLV-GYGITVNAVAPGNIET  206 (281)
T ss_dssp             HHHHHHHHHHHHHT--------CEEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEECSBCS
T ss_pred             HHHHHHHHHHHHcC--------CCEEEEECChhhcCCCCCCchhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEecCcccC
Confidence            99999999999876        79999999999999999999999999999999999999999 8999999999999999


Q ss_pred             CCCCCC-----C-------ChHHHHHH--hhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          165 TAGVSK-----L-------APEEIRSK--ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       165 ~~~~~~-----~-------~~~~~~~~--~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      ++....     .       ........  .....+ +++.+|+|+|++++||+++.+.+++|+.+.+|||..+.
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~  279 (281)
T 3s55_A          207 PMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQY-APFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR  279 (281)
T ss_dssp             TTTSSHHHHHC-------CCHHHHHHHHHHHCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             ccccchhhhccccccccccchhHHHHHHHhhhccC-cCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence            986431     0       01111111  112223 68899999999999999999999999999999997653

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=6.4e-38  Score=261.55  Aligned_cols=212  Identities=25%  Similarity=0.306  Sum_probs=185.4

Q ss_pred             CcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHH
Q 025124            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG   82 (257)
Q Consensus         3 r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~   82 (257)
                      |+.++++++.+++.+.+.++.++.+|++|+++++++++++.+++|++|+||||||+....++.+.+.++|++++++|+.+
T Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g  139 (280)
T 3pgx_A           60 ASPEDLDETARLVEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTG  139 (280)
T ss_dssp             CCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHH
T ss_pred             cCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHH
Confidence            47889999999999888899999999999999999999999999999999999998888888999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcc
Q 025124           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (257)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v  162 (257)
                      +++++++++|+|++++.       .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||++
T Consensus       140 ~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v  211 (280)
T 3pgx_A          140 TWRTLRATVPAMIEAGN-------GGSIVVVSSSAGLKATPGNGHYSASKHGLTALTNTLAIELG-EYGIRVNSIHPYSV  211 (280)
T ss_dssp             HHHHHHHHHHHHHHHCS-------CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSB
T ss_pred             HHHHHHHHHHHHHhcCC-------CCEEEEEcchhhccCCCCchhHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCcc
Confidence            99999999999988642       58999999999999999999999999999999999999999 89999999999999


Q ss_pred             cCCCCCCCCChHHHHH--H------hhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          163 KDTAGVSKLAPEEIRS--K------ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       163 ~t~~~~~~~~~~~~~~--~------~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +|++............  .      .....+. ++.+|+|+|+.++||+++.+++++|+.+.+|||...
T Consensus       212 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  279 (280)
T 3pgx_A          212 ETPMIEPEAMMEIFARHPSFVHSFPPMPVQPN-GFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGALK  279 (280)
T ss_dssp             CSTTCCHHHHHHHHHHCGGGGGGSCCBTTBCS-SCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTGGG
T ss_pred             cCcccchhhhhhhhhcCchhhhhhhhcccCCC-CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            9997532110000000  0      1112233 688999999999999999999999999999999754

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-37  Score=257.51  Aligned_cols=215  Identities=24%  Similarity=0.336  Sum_probs=187.9

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHh-CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      ++|++++++++.+++.+.+.++.++.+|++|+++++++++++.+.+ +++|+||||||+....++.+.+.++|+..+++|
T Consensus        51 ~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N  130 (273)
T 1ae1_A           51 CSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTN  130 (273)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHH
T ss_pred             EeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHh
Confidence            3688999999999998878889999999999999999999999999 899999999998877888999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.+++.++++++|.|++++        .|+||++||..+..+.++...|+++|+++++|+++++.|+. ++||+|++|+|
T Consensus       131 ~~g~~~~~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~P  201 (273)
T 1ae1_A          131 FEAAYHLSQIAYPLLKASQ--------NGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWA-KDNIRVNSVAP  201 (273)
T ss_dssp             THHHHHHHHHHHHHHHHHT--------SEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHhcC--------CcEEEEEcCHhhcCCCCCcchhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEEe
Confidence            9999999999999998876        68999999999999999999999999999999999999999 89999999999


Q ss_pred             CcccCCCCCCCCC----hHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          160 GPIKDTAGVSKLA----PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       160 g~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      |+++|++......    ............|.+++.+|+|+|+.+++|+++.+++++|+.+.+|||..+.
T Consensus       202 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~~  270 (273)
T 1ae1_A          202 GVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYITGQIIWADGGFTAN  270 (273)
T ss_dssp             CSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             CCCcCchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEECCCcccC
Confidence            9999997543222    1233344455678889999999999999999998999999999999997653

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=1.2e-37  Score=258.63  Aligned_cols=210  Identities=29%  Similarity=0.421  Sum_probs=187.3

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC--CCCCCCCCHHHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n   79 (257)
                      +|+.++++++.+++   +.++.++.+|++|+++++++++++.+++|++|++|||||+..  ...+.+.+.++|++.+++|
T Consensus        42 ~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN  118 (271)
T 3tzq_B           42 DLPETDLAGAAASV---GRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVN  118 (271)
T ss_dssp             ECTTSCHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHh---CCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHH
Confidence            57777777776666   668899999999999999999999999999999999999763  4567789999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.++++++++++|+|++++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+|
T Consensus       119 ~~g~~~l~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~P  189 (271)
T 3tzq_B          119 ARGTMLMCKYAIPRLISAG--------GGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYG-RHGVRCNAIAP  189 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHTT--------CEEEEEECCGGGTSBCSSCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHhcC--------CCEEEEECCHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHh-hcCEEEEEEEe
Confidence            9999999999999999876        79999999999999999999999999999999999999999 89999999999


Q ss_pred             CcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCC
Q 025124          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSN  225 (257)
Q Consensus       160 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~  225 (257)
                      |+++|++..... .......+....+.+++.+|+|+|+.++||+++.+.+++|+.+.+||| ++..
T Consensus       190 G~v~t~~~~~~~-~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG-~~~~  253 (271)
T 3tzq_B          190 GLVRTPRLEVGL-PQPIVDIFATHHLAGRIGEPHEIAELVCFLASDRAAFITGQVIAADSG-LLAH  253 (271)
T ss_dssp             CCBCCTTTC----CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT-TTTB
T ss_pred             CCCcCccccccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCCcCCCEEEECCC-cccc
Confidence            999999765433 345556667778889999999999999999999999999999999999 4443

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=8.5e-38  Score=260.90  Aligned_cols=213  Identities=25%  Similarity=0.346  Sum_probs=183.8

Q ss_pred             CC-cHHHHHHHHHHHHhc-CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            2 GR-RKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         2 ~r-~~~~l~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      +| +.++++++.+++.+. +.++.++.+|++|+++++++++++.+++|++|+||||||+....++.+.+.++|++.+++|
T Consensus        56 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN  135 (281)
T 3v2h_A           56 GFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVN  135 (281)
T ss_dssp             CCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred             eCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHH
Confidence            56 677888888888876 6789999999999999999999999999999999999999888889999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.|++.++++++|.|++++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+|
T Consensus       136 ~~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~P  206 (281)
T 3v2h_A          136 LSSSFHTIRGAIPPMKKKG--------WGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEVA-ESGVTVNSICP  206 (281)
T ss_dssp             THHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHcC--------CCEEEEECCcccccCCCCchHHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEEC
Confidence            9999999999999999876        79999999999999999999999999999999999999999 89999999999


Q ss_pred             CcccCCCCCCCCChH---------H-HHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          160 GPIKDTAGVSKLAPE---------E-IRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       160 g~v~t~~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      |+++|++........         + ....+....+.+++.+|+|+|++++||+++.+.+++|+++.+|||+++
T Consensus       207 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG~~~  280 (281)
T 3v2h_A          207 GYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLALYLAGDDAAQITGTHVSMDGGWTA  280 (281)
T ss_dssp             CSBCC----------------------------CCTTCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTTGGG
T ss_pred             CCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHcCCCcCCCCCcEEEECCCccC
Confidence            999999764332110         0 112345567888999999999999999999999999999999999764

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=4.3e-38  Score=262.22  Aligned_cols=212  Identities=28%  Similarity=0.426  Sum_probs=185.3

Q ss_pred             CcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHH
Q 025124            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG   82 (257)
Q Consensus         3 r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~   82 (257)
                      |+.++++++.+++.+.+.++.++.+|++|+++++++++++.+++|+||+||||||+....++.+.+.++|++++++|+.+
T Consensus        56 ~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g  135 (277)
T 3tsc_A           56 ASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTG  135 (277)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHH
T ss_pred             cCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHH
Confidence            37888999999998888899999999999999999999999999999999999998888888999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcc
Q 025124           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (257)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v  162 (257)
                      +++++++++|.|.+++.       .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||++
T Consensus       136 ~~~l~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v  207 (277)
T 3tsc_A          136 TWNTVMAGAPRIIEGGR-------GGSIILISSAAGMKMQPFMIHYTASKHAVTGLARAFAAELG-KHSIRVNSVHPGPV  207 (277)
T ss_dssp             HHHHHHHHHHHHHHHTS-------CEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSB
T ss_pred             HHHHHHHHHHHHHhcCC-------CCEEEEEccHhhCCCCCCchhhHHHHHHHHHHHHHHHHHhC-ccCeEEEEEEeCCC
Confidence            99999999999988642       58999999999999999999999999999999999999999 89999999999999


Q ss_pred             cCCCCCCCCChH---------HHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          163 KDTAGVSKLAPE---------EIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       163 ~t~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +|++........         ..........+. ++.+|+|+|++++||+++.+++++|+.+.+|||.+.
T Consensus       208 ~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  276 (277)
T 3tsc_A          208 NTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPD-WVAEPEDIADTVCWLASDESRKVTAAQIPVDQGSTQ  276 (277)
T ss_dssp             SSGGGSHHHHHHHHHHHHTCGGGTTTTCCSSSC-SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cCCcccchhhhhhhhcccccHHHHHHhhhccCC-CCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCccc
Confidence            998753211000         000111122333 678999999999999999999999999999999764

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=1.4e-37  Score=259.00  Aligned_cols=212  Identities=28%  Similarity=0.431  Sum_probs=189.2

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.+++   +.++.++.+|++|+++++++++++.+++|++|+||||||+....++.+.+.++|++++++|+.
T Consensus        58 ~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~  134 (277)
T 4dqx_A           58 DVNEDAAVRVANEI---GSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVK  134 (277)
T ss_dssp             ESSHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTH
T ss_pred             eCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhH
Confidence            67888888777664   568999999999999999999999999999999999999888888999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      |+++++++++|.|++++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||+
T Consensus       135 g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~  205 (277)
T 4dqx_A          135 GIFLCSKYVIPVMRRNG--------GGSIINTTSYTATSAIADRTAYVASKGAISSLTRAMAMDHA-KEGIRVNAVAPGT  205 (277)
T ss_dssp             HHHHHHHHHHHHHTTTT--------CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECS
T ss_pred             HHHHHHHHHHHHHHHcC--------CcEEEEECchhhCcCCCCChhHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCc
Confidence            99999999999999876        78999999999999999999999999999999999999999 8999999999999


Q ss_pred             ccCCCCCCC----CChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCC
Q 025124          162 IKDTAGVSK----LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSN  225 (257)
Q Consensus       162 v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~  225 (257)
                      ++|++....    .........+....+.+++.+|+|+|++++||+++.+++++|+++.+|||..+..
T Consensus       206 v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~~  273 (277)
T 4dqx_A          206 IDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLASDRSRFATGSILTVDGGSSIGN  273 (277)
T ss_dssp             BCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSSSCC
T ss_pred             CcCchhhhhcccccchhHHHHHHHhcCcccCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCchhhhh
Confidence            999863211    1222333346667788999999999999999999999999999999999987753

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=2e-37  Score=253.84  Aligned_cols=212  Identities=27%  Similarity=0.301  Sum_probs=195.4

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|++++++++.+++.+.+.++.++.+|++|+++++++++++.++++++|++|||||+....++.+.+.++|+..+++|+
T Consensus        35 ~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~  114 (247)
T 3lyl_A           35 TATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNL  114 (247)
T ss_dssp             EESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             EeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHh
Confidence            36889999999999998888999999999999999999999999999999999999998888888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .+++.++++++|.|.+++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||++++|+||
T Consensus       115 ~~~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~PG  185 (247)
T 3lyl_A          115 SSIFRMSKECVRGMMKKR--------WGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVA-SRNITVNVVAPG  185 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHcC--------CeEEEEEcchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHH-HcCeEEEEEeeC
Confidence            999999999999999876        79999999999999999999999999999999999999999 889999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ++.|++....  ..+.........+.+++.+|+|+|+.+++|+++.+.+++|+.+.+|||+++
T Consensus       186 ~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~~~  246 (247)
T 3lyl_A          186 FIATDMTDKL--TDEQKSFIATKIPSGQIGEPKDIAAAVAFLASEEAKYITGQTLHVNGGMYM  246 (247)
T ss_dssp             SBCCTTTTTS--CHHHHHHHHTTSTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             cEecccchhc--cHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhCCCcCCccCCEEEECCCEec
Confidence            9999875443  344455566777888999999999999999999999999999999999875

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.2e-38  Score=261.20  Aligned_cols=214  Identities=22%  Similarity=0.303  Sum_probs=170.0

Q ss_pred             CcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCC--CCCCCCCCCCHHHHHHHHHHHh
Q 025124            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG--NFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         3 r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~--~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      |+.++++++.+++.+.+.++.++.+|++|+++++++++++.+++|++|+||||||+  ....++.+.+.++|+..+++|+
T Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~  141 (280)
T 4da9_A           62 GDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNL  141 (280)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHH
T ss_pred             CCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhh
Confidence            57888999999999888899999999999999999999999999999999999998  4557888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .|+++++++++|.|.+++...     .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||
T Consensus       142 ~g~~~l~~~~~~~~~~~~~~~-----~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG  215 (280)
T 4da9_A          142 RGTVFFTQAVLKAMLASDARA-----SRSIINITSVSAVMTSPERLDYCMSKAGLAAFSQGLALRLA-ETGIAVFEVRPG  215 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCC-----CEEEEEECCC-------CCHHHHHHHHHHHHHHHHHHHHHT-TTTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHhCCCC-----CCEEEEEcchhhccCCCCccHHHHHHHHHHHHHHHHHHHHH-HhCcEEEEEeec
Confidence            999999999999998754211     57999999999999999999999999999999999999999 899999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhh-hccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          161 PIKDTAGVSKLAPEEIRSKATD-YMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      +++|++.....  ......... ..|.+++.+|+|+|++++||+++.+.+++|+++.+|||+.+.
T Consensus       216 ~v~T~~~~~~~--~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  278 (280)
T 4da9_A          216 IIRSDMTAAVS--GKYDGLIESGLVPMRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGGLSIG  278 (280)
T ss_dssp             CBCC------------------------CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTTCC--
T ss_pred             CCcCCchhhcc--hhHHHHHhhcCCCcCCcCCHHHHHHHHHHHhCccccCCCCCEEEECCCcccC
Confidence            99998764321  112222223 567889999999999999999999999999999999998764

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=4e-38  Score=262.32  Aligned_cols=211  Identities=22%  Similarity=0.288  Sum_probs=184.4

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.+++   +.++.++.+|++|+++++++++++.+++|++|++|||||+....++.+.+.++|++++++|+.
T Consensus        60 ~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~  136 (277)
T 3gvc_A           60 DIDGDAADAAATKI---GCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLR  136 (277)
T ss_dssp             ESSHHHHHHHHHHH---CSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHH
T ss_pred             eCCHHHHHHHHHHc---CCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            68888888877766   678999999999999999999999999999999999999988888999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      ++++++++++|.|++++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||+
T Consensus       137 g~~~l~~~~~~~m~~~~--------~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~  207 (277)
T 3gvc_A          137 GAWLCTKHAAPRMIERG--------GGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELR-SSGIRSNTLLPAF  207 (277)
T ss_dssp             HHHHHHHHHHHHHHHTT--------CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECS
T ss_pred             HHHHHHHHHHHHHHhcC--------CcEEEEEcchhhccCCCCchhHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeeCC
Confidence            99999999999999876        79999999999999999999999999999999999999999 8999999999999


Q ss_pred             ccCCCCCCCCC--hHHHHHHhhh---hccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          162 IKDTAGVSKLA--PEEIRSKATD---YMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       162 v~t~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      ++|++......  ..........   ..+.+++.+|+|+|++++||+++.+++++|+.+.+|||....
T Consensus       208 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~  275 (277)
T 3gvc_A          208 VDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDASMITGTTQIADGGTIAA  275 (277)
T ss_dssp             BCCHHHHHHHTCC------CCHHHHHHHHHSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred             ccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCHHHHHHHHHHHcCCccCCccCcEEEECCcchhc
Confidence            99986422110  1011111111   445678999999999999999999999999999999997654

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=1.6e-37  Score=260.78  Aligned_cols=217  Identities=22%  Similarity=0.180  Sum_probs=183.8

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC----CCCCCCCCHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF----LVPAEDLSPNGFRTVIE   77 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~----~~~~~~~~~~~~~~~~~   77 (257)
                      +|+.+..+ ..+++.+...++.++.||++|.++++++++++.+++|+||+||||||+..    ..++.+.+.++|+..++
T Consensus        64 ~r~~~~~~-~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~  142 (293)
T 3grk_A           64 YQGDALKK-RVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTML  142 (293)
T ss_dssp             ECSHHHHH-HHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHH
T ss_pred             cCCHHHHH-HHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHH
Confidence            46644333 33444444357899999999999999999999999999999999999876    56788999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEE
Q 025124           78 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (257)
Q Consensus        78 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v  157 (257)
                      +|+.+++.++++++|+|++          .|+||++||..+..+.+++..|+++|+|+++|+++++.|+. ++||+||+|
T Consensus       143 ~N~~g~~~l~~~~~~~m~~----------~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v  211 (293)
T 3grk_A          143 ISVYSLTAVSRRAEKLMAD----------GGSILTLTYYGAEKVMPNYNVMGVAKAALEASVKYLAVDLG-PQNIRVNAI  211 (293)
T ss_dssp             HHTHHHHHHHHHHHHHTTT----------CEEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEE
T ss_pred             HHHHHHHHHHHHHHHhccC----------CCEEEEEeehhhccCCCchHHHHHHHHHHHHHHHHHHHHHh-HhCCEEEEE
Confidence            9999999999999999975          58999999999999999999999999999999999999999 899999999


Q ss_pred             ecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCc
Q 025124          158 APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLP  230 (257)
Q Consensus       158 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~  230 (257)
                      +||+++|++..................+++++.+|+|+|++++||+++.+++++|+++.+|||+.+...+...
T Consensus       212 ~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~  284 (293)
T 3grk_A          212 SAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSGYHVIGMKAVD  284 (293)
T ss_dssp             EECCCCC------CCHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBCC----
T ss_pred             ecCCCcchhhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCCcceEEEECCCcccCCCCcCC
Confidence            9999999876554444555666777889999999999999999999999999999999999999887654443

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=1.7e-37  Score=256.17  Aligned_cols=211  Identities=29%  Similarity=0.392  Sum_probs=187.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.+++   +.++.++.+|++|+++++++++++.+++|++|+||||||+....++.+.+.++|++++++|+.
T Consensus        39 ~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~  115 (259)
T 4e6p_A           39 DIDIERARQAAAEI---GPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVA  115 (259)
T ss_dssp             ESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTH
T ss_pred             eCCHHHHHHHHHHh---CCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhH
Confidence            68888888877766   457899999999999999999999999999999999999888888899999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      ++++++++++|.|.+++.       .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||+
T Consensus       116 g~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~vn~v~PG~  187 (259)
T 4e6p_A          116 GTLFTLQAAARQMIAQGR-------GGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLI-KHRINVNAIAPGV  187 (259)
T ss_dssp             HHHHHHHHHHHHHHHHTS-------CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECC
T ss_pred             HHHHHHHHHHHHHHhcCC-------CeEEEEECChhhccCCCCChHHHHHHHHHHHHHHHHHHHhh-hcCCEEEEEEECC
Confidence            999999999999987642       58999999999999999999999999999999999999999 8999999999999


Q ss_pred             ccCCCCCCC---------CChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          162 IKDTAGVSK---------LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       162 v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ++|++....         ....+.........|.+++.+|+|+|++++||+++.+.+++|+.+.+|||..+
T Consensus       188 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdgG~~~  258 (259)
T 4e6p_A          188 VDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLASAESDYIVSQTYNVDGGNWM  258 (259)
T ss_dssp             BCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHTTSGGGTTCCSCEEEESTTSSC
T ss_pred             CccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECcChhc
Confidence            999864321         01233344556678889999999999999999999999999999999999764

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=9.6e-38  Score=259.51  Aligned_cols=208  Identities=27%  Similarity=0.375  Sum_probs=186.9

Q ss_pred             HHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHH
Q 025124            6 TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI   85 (257)
Q Consensus         6 ~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~   85 (257)
                      +.++++.+++.+.+.++.++.+|++|.++++++ .+..++++++|+||||||+....++.+.+.++|++.+++|+.|+++
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~-~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~  143 (273)
T 3uf0_A           65 DGVKEVADEIADGGGSAEAVVADLADLEGAANV-AEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWV  143 (273)
T ss_dssp             THHHHHHHHHHTTTCEEEEEECCTTCHHHHHHH-HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHH
T ss_pred             HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHH-HHHHHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHH
Confidence            556778888888788899999999999999999 4555667999999999999888889999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCC
Q 025124           86 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT  165 (257)
Q Consensus        86 l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~  165 (257)
                      ++++++|.|.+++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||++.|+
T Consensus       144 l~~~~~~~m~~~~--------~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~  214 (273)
T 3uf0_A          144 LSRSFGTAMLAHG--------SGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWA-GRGVGVNALAPGYVVTA  214 (273)
T ss_dssp             HHHHHHHHHHHHT--------CEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSG
T ss_pred             HHHHHHHHHHhcC--------CCEEEEEcchHhcCCCCCChhHHHHHHHHHHHHHHHHHHHh-hcCcEEEEEEeCCCcCC
Confidence            9999999999876        79999999999999999999999999999999999999999 89999999999999998


Q ss_pred             CCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          166 AGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +........+.........|.+++.+|+|+|++++||+++.+++++|+.+.+|||+.+
T Consensus       215 ~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~a~~itG~~i~vdGG~~~  272 (273)
T 3uf0_A          215 NTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASDAASYVHGQVLAVDGGWLA  272 (273)
T ss_dssp             GGHHHHTSHHHHHHHHHHSTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             chhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECcCccC
Confidence            7543333344555667778899999999999999999999999999999999999754

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=8.5e-38  Score=262.75  Aligned_cols=217  Identities=24%  Similarity=0.213  Sum_probs=187.5

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIE   77 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~   77 (257)
                      +|+.+..+.+.+...+. +++.++.||++|+++++++++++.+++|+||+||||||+...    .++.+.+.++|++.++
T Consensus        63 ~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~  141 (296)
T 3k31_A           63 YLSETFKKRVDPLAESL-GVKLTVPCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMH  141 (296)
T ss_dssp             ESSGGGHHHHHHHHHHH-TCCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHH
T ss_pred             eCChHHHHHHHHHHHhc-CCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHH
Confidence            46655444444444443 457899999999999999999999999999999999998764    7788999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEE
Q 025124           78 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (257)
Q Consensus        78 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v  157 (257)
                      +|+.++++++++++|+|.+          .|+||++||..+..+.+++..|+++|+|+++|+++++.|+. ++||+||+|
T Consensus       142 vN~~g~~~l~~~~~~~m~~----------~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~-~~gIrvn~v  210 (296)
T 3k31_A          142 ISCYSFTYIASKAEPLMTN----------GGSILTLSYYGAEKVVPHYNVMGVCKAALEASVKYLAVDLG-KQQIRVNAI  210 (296)
T ss_dssp             HHTHHHHHHHHHHGGGCTT----------CEEEEEEECGGGTSCCTTTTHHHHHHHHHHHHHHHHHHHHH-TTTEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHhhc----------CCEEEEEEehhhccCCCCchhhHHHHHHHHHHHHHHHHHHh-hcCcEEEEE
Confidence            9999999999999999865          58999999999999999999999999999999999999999 899999999


Q ss_pred             ecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCc
Q 025124          158 APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLP  230 (257)
Q Consensus       158 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~  230 (257)
                      +||+++|++..................+++++.+|+|+|++++||+++.+++++|+++.+|||+.+.....+.
T Consensus       211 ~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~~~~~~~~~  283 (296)
T 3k31_A          211 SAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLDDVGGAALYLLSDLGRGTTGETVHVDCGYHVVGMKSVD  283 (296)
T ss_dssp             EECCCCCSSCCSCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCSSCCC-
T ss_pred             EECCCcCchhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCccCCEEEECCCccccCCccCC
Confidence            9999999876443222344556667788999999999999999999999999999999999999887665544

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=8.4e-38  Score=257.43  Aligned_cols=209  Identities=23%  Similarity=0.293  Sum_probs=186.4

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|++++++++.+++   +.++.++.+|++|+++++++++++.++++++|++|||||+....++.+.+.++|++.+++|+
T Consensus        38 ~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~  114 (255)
T 4eso_A           38 TGRNESNIARIREEF---GPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNT  114 (255)
T ss_dssp             EESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHT
T ss_pred             EeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhh
Confidence            368888888887776   45799999999999999999999999999999999999998888899999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .++++++++++|+|++          .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||
T Consensus       115 ~g~~~~~~~~~~~~~~----------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG  183 (255)
T 4eso_A          115 KGAFFTVQRLTPLIRE----------GGSIVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELL-PRGIRVNSVSPG  183 (255)
T ss_dssp             HHHHHHHHHHGGGEEE----------EEEEEEECCGGGSSBCTTBHHHHHHHHHHHHHHHHHHHHTG-GGTCEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHhc----------CCEEEEECChhhcCCCCCchHHHHHHHHHHHHHHHHHHHHh-hhCcEEEEEecC
Confidence            9999999999998865          58899999999999999999999999999999999999999 899999999999


Q ss_pred             cccCCCCCCCCChH----HHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          161 PIKDTAGVSKLAPE----EIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       161 ~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      +++|++........    ..........|.+++.+|+|+|+.++||+++ +++++|+.+.+|||+...
T Consensus       184 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~-~~~itG~~i~vdGG~~~~  250 (255)
T 4eso_A          184 FIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAFE-ATFTTGAKLAVDGGLGQK  250 (255)
T ss_dssp             SBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHHT-CTTCCSCEEEESTTTTTT
T ss_pred             cccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCc-CcCccCCEEEECCCcccc
Confidence            99999764322222    2233455667899999999999999999998 899999999999997654

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=1.4e-38  Score=263.04  Aligned_cols=213  Identities=23%  Similarity=0.314  Sum_probs=179.0

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.+++.+.+.++.++.+|++|+++++++++++.+++|++|+||||||+....++.+.+.++|++.+++|+.
T Consensus        45 ~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~  124 (262)
T 3ksu_A           45 AKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNK  124 (262)
T ss_dssp             GGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHH
T ss_pred             ccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhH
Confidence            45678899999999888889999999999999999999999999999999999999888888999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      ++++++++++|+|.+          .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||+
T Consensus       125 g~~~l~~~~~~~m~~----------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~  193 (262)
T 3ksu_A          125 VAYFFIKQAAKHMNP----------NGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKELM-KQQISVNAIAPGP  193 (262)
T ss_dssp             HHHHHHHHHHTTEEE----------EEEEEEECCCHHHHHHCCCCC-----CHHHHHHHHHHHHTT-TTTCEEEEEEECC
T ss_pred             HHHHHHHHHHHhhcC----------CCEEEEEechhhccCCCCCchhHHHHHHHHHHHHHHHHHHH-HcCcEEEEEeeCC
Confidence            999999999999943          68999999999999989999999999999999999999999 8999999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCC
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPR  227 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~  227 (257)
                      ++|++..... ..+.........+.+++.+|+|+|+.++||+++ +.+++|+.+.+|||.....+.
T Consensus       194 v~T~~~~~~~-~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~-~~~itG~~i~vdGg~~~~~~~  257 (262)
T 3ksu_A          194 MDTSFFYGQE-TKESTAFHKSQAMGNQLTKIEDIAPIIKFLTTD-GWWINGQTIFANGGYTTREGH  257 (262)
T ss_dssp             CCTHHHHTCC-------------CCCCSCCGGGTHHHHHHHHTT-TTTCCSCEEEESTTCCCC---
T ss_pred             CcCccccccC-chHHHHHHHhcCcccCCCCHHHHHHHHHHHcCC-CCCccCCEEEECCCccCCCcc
Confidence            9998754432 233344455667888999999999999999998 899999999999998766443

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=3e-37  Score=252.77  Aligned_cols=210  Identities=32%  Similarity=0.422  Sum_probs=188.4

Q ss_pred             CC-cHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            2 GR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r-~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      +| ++++++++.+++.+.+.++.++.+|++|+++++++++++.++++++|++|||||+....++.+.+.++|++++++|+
T Consensus        35 ~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~  114 (246)
T 2uvd_A           35 YAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNL  114 (246)
T ss_dssp             ESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHT
T ss_pred             eCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHh
Confidence            46 88889999999988778899999999999999999999999999999999999987777888899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .+++.++++++|.|++++        .|+||++||..+..+.++...|+++|+++++|+++++.|+. ++||++++|+||
T Consensus       115 ~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~Pg  185 (246)
T 2uvd_A          115 KGVFLCTKAVSRFMMRQR--------HGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELA-SRNITVNAIAPG  185 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CEEEEEECCTHHHHCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHcC--------CcEEEEECCHHhcCCCCCCchHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEec
Confidence            999999999999999876        69999999999988888999999999999999999999999 899999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      +++|++.... . ......+....+.+++.+|+|+|+.+++|+++.+.+++|+.+.+|||..
T Consensus       186 ~v~t~~~~~~-~-~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~~  245 (246)
T 2uvd_A          186 FIATDMTDVL-D-ENIKAEMLKLIPAAQFGEAQDIANAVTFFASDQSKYITGQTLNVDGGMV  245 (246)
T ss_dssp             SBGGGCSSCC-C-TTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred             cccCcchhhc-C-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCEEEECcCcc
Confidence            9999875432 1 2223334455677889999999999999999888999999999999964

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.5e-37  Score=256.76  Aligned_cols=207  Identities=28%  Similarity=0.371  Sum_probs=186.4

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      .|+.++++++.+++.+.+.++.++.+|++|+++++++++++.+++|++|+||||||+....++.+.+.++|++.+++|+.
T Consensus        63 ~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~  142 (271)
T 3v2g_A           63 VNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFR  142 (271)
T ss_dssp             SSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTH
T ss_pred             CCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            35567889999999988889999999999999999999999999999999999999988888999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccc-cccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~-~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      ++++++++++|.|++          .|+||++||..+..+ .++...|+++|+|+++|+++++.|+. ++||+||+|+||
T Consensus       143 g~~~~~~~~~~~m~~----------~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gIrvn~v~PG  211 (271)
T 3v2g_A          143 APFVAIRSASRHLGD----------GGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLG-PRGITVNIVHPG  211 (271)
T ss_dssp             HHHHHHHHHHHHCCT----------TCEEEEECCGGGTCCCSTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEEC
T ss_pred             HHHHHHHHHHHHHhc----------CCEEEEEeChhhccCCCCCchHHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEecC
Confidence            999999999999864          589999999877655 68889999999999999999999999 899999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      ++.|++.....   ...+......+.+++.+|+|+|+.++||+++.+++++|+.+.+|||+.
T Consensus       212 ~v~T~~~~~~~---~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~  270 (271)
T 3v2g_A          212 STDTDMNPADG---DHAEAQRERIATGSYGEPQDIAGLVAWLAGPQGKFVTGASLTIDGGAN  270 (271)
T ss_dssp             SBCSSSSCSSC---SSHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CCcCCcccccc---hhHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEeCcCcc
Confidence            99999765432   223344566788899999999999999999999999999999999964

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=6e-37  Score=259.95  Aligned_cols=213  Identities=26%  Similarity=0.401  Sum_probs=186.1

Q ss_pred             CcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHH
Q 025124            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG   82 (257)
Q Consensus         3 r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~   82 (257)
                      ++.++++++.+++.+.+.++.++.+|++|+++++++++++.+++|+||+||||||+....++.+.+.++|+.++++|+.|
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g  169 (317)
T 3oec_A           90 GSPEELKETVRLVEEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIG  169 (317)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHH
T ss_pred             cCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHH
Confidence            45788999999998888899999999999999999999999999999999999999888889999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcc
Q 025124           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (257)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v  162 (257)
                      +++++++++|.|.+++.       .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||++
T Consensus       170 ~~~l~~~~~~~m~~~~~-------~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v  241 (317)
T 3oec_A          170 AWHACRAVLPSMIERGQ-------GGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLSLANEVG-RHNIRVNSVNPGAV  241 (317)
T ss_dssp             HHHHHHHHHHHHHHTCS-------CEEEEEECCGGGSSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSB
T ss_pred             HHHHHHHHHHHHHHcCC-------CCEEEEECcHHhcCCCCCCcchHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCcc
Confidence            99999999999988642       58999999999999999999999999999999999999999 89999999999999


Q ss_pred             cCCCCCCC------------CChHHHHHHh--hhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          163 KDTAGVSK------------LAPEEIRSKA--TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       163 ~t~~~~~~------------~~~~~~~~~~--~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      +|++....            .........+  ....+ .++.+|+|+|++++||+++.+++++|+.|.+|||+.+.
T Consensus       242 ~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~~~  316 (317)
T 3oec_A          242 NTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLP-IPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLAR  316 (317)
T ss_dssp             SSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTTTCSSS-SSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             cCccccchhhhhhhhhhccccchhHHHHHHhhhccCC-CCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchhhc
Confidence            99864311            1111111111  11223 57789999999999999999999999999999998653

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=1.9e-37  Score=255.66  Aligned_cols=213  Identities=20%  Similarity=0.223  Sum_probs=187.3

Q ss_pred             CCcHHH--HHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            2 GRRKTV--LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         2 ~r~~~~--l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      +|+.++  ++++.+++.+.+.++.++.+|++|+++++++++++.+++|++|+||||||+....++.+.+.++|+.++++|
T Consensus        33 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N  112 (258)
T 3a28_C           33 DLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVN  112 (258)
T ss_dssp             ECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred             eCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhc
Confidence            577777  888888888777889999999999999999999999999999999999998777788899999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCC-ceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSG-GIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~-g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      +.+++.++++++|.|.+++        . |+||++||..+..+.++...|+++|+++++|+++++.|+. ++||+||+|+
T Consensus       113 ~~g~~~~~~~~~~~~~~~~--------~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~vn~v~  183 (258)
T 3a28_C          113 VFSVFFGIQAASRKFDELG--------VKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELA-PKGHTVNAYA  183 (258)
T ss_dssp             THHHHHHHHHHHHHHHHHT--------CCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEE
T ss_pred             cHHHHHHHHHHHHHHHhcC--------CCcEEEEECcchhccCCCCchhHHHHHHHHHHHHHHHHHHHH-hhCeEEEEEE
Confidence            9999999999999998865        5 8999999999999999999999999999999999999999 8999999999


Q ss_pred             cCcccCCCCCCCC--------C-hHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          159 PGPIKDTAGVSKL--------A-PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       159 Pg~v~t~~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ||+++|++.....        . .......+....|.+++.+|+|+|+.+++|+++.+++++|+.+.+|||..+
T Consensus       184 PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~  257 (258)
T 3a28_C          184 PGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDGGMLY  257 (258)
T ss_dssp             ECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSCC
T ss_pred             CCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCcccCCCCCCEEEECCCEec
Confidence            9999998643210        0 012223344456778899999999999999999899999999999999653

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=1.9e-37  Score=256.29  Aligned_cols=210  Identities=23%  Similarity=0.378  Sum_probs=187.8

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC-CCCCCCCCCHHHHHHHHHHHh
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      +|+.++++++.+++.+.+.++.++.+|++|+++++++++++.+++|++|+||||||+. ...++.+.+.++|+..+++|+
T Consensus        38 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~  117 (262)
T 1zem_A           38 DMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINV  117 (262)
T ss_dssp             ESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHT
T ss_pred             eCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhh
Confidence            6888999999999988778899999999999999999999999999999999999987 667788899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .++++++++++|.|.+++        .|+||++||..+..+.++...|+++|+++++|+++++.|+. ++||+||+|+||
T Consensus       118 ~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~vn~v~PG  188 (262)
T 1zem_A          118 TGAFHVLKAVSRQMITQN--------YGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLA-PYNIRVNAISPG  188 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CEEEEEECCHHHHSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHhcC--------CcEEEEEcchhhccCCCCCchHHHHHHHHHHHHHHHHHHHH-hhCeEEEEEecC
Confidence            999999999999999876        68999999999999989999999999999999999999999 899999999999


Q ss_pred             cccCCCCCCC------------CC-hHH-HHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCC
Q 025124          161 PIKDTAGVSK------------LA-PEE-IRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG  220 (257)
Q Consensus       161 ~v~t~~~~~~------------~~-~~~-~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg  220 (257)
                      ++.|++....            .. .++ ....+....|++++.+|+|+|+.++||+++.+++++|+.+.+|||
T Consensus       189 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          189 YMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             SBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             CcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcCCcEEecCCC
Confidence            9999874321            11 122 333344556888999999999999999999999999999999997

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=6.5e-38  Score=260.81  Aligned_cols=210  Identities=21%  Similarity=0.267  Sum_probs=187.3

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|++++++++.+++.+.+.++.++.+|++|.++++++++++.+. +++|++|||||+....++.+.+.++|+..+++|+.
T Consensus        64 ~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~  142 (275)
T 4imr_A           64 GVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI-APVDILVINASAQINATLSALTPNDLAFQLAVNLG  142 (275)
T ss_dssp             ESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH-SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTH
T ss_pred             cCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhH
Confidence            68888889999999888889999999999999999999999887 99999999999888888999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      |+++++++++|+|++++        .|+||++||..+..+.+....|++||+|+++|+++++.|+. ++||+||+|+||+
T Consensus       143 g~~~l~~~~~~~m~~~~--------~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~  213 (275)
T 4imr_A          143 STVDMLQSALPKMVARK--------WGRVVSIGSINQLRPKSVVTAYAATKAAQHNLIQSQARDFA-GDNVLLNTLAPGL  213 (275)
T ss_dssp             HHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESS
T ss_pred             HHHHHHHHHHHHHHhcC--------CcEEEEECCHHhCCCCCCchhhHHHHHHHHHHHHHHHHHhc-ccCcEEEEEEecc
Confidence            99999999999999876        79999999999999888888999999999999999999999 8999999999999


Q ss_pred             ccCCCCCCCCC-hHHHHHHhhhhc-cCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          162 IKDTAGVSKLA-PEEIRSKATDYM-AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       162 v~t~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                      ++|++...... ..+......... +++++.+|+|+|++++||+++.+++++|+.+.+|||+
T Consensus       214 v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~  275 (275)
T 4imr_A          214 VDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAALFLASEACSFMTGETIFLTGGY  275 (275)
T ss_dssp             BCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESSCC
T ss_pred             ccCcccccccccChHHHHHHHhhcCccCCCcCHHHHHHHHHHHcCcccCCCCCCEEEeCCCC
Confidence            99986432110 122223333344 8889999999999999999999999999999999994

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=7.1e-37  Score=253.30  Aligned_cols=213  Identities=25%  Similarity=0.363  Sum_probs=183.6

Q ss_pred             CCCcHHHHHHHHHHHHhcC-CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~-~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      ++|+.++++++.+++.+.+ .++.++.+|++|+++++++++++.++++++|+||||||+....++.+.+.++|+..+++|
T Consensus        53 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n  132 (266)
T 3o38_A           53 SDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVT  132 (266)
T ss_dssp             EESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred             ecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHH
Confidence            3688999999999997764 689999999999999999999999999999999999998888888999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.+++.++++++|+|.++..       .++||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+|++|+|
T Consensus       133 ~~~~~~l~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~-~~gi~v~~v~P  204 (266)
T 3o38_A          133 LTSVMRATRAALRYFRGVDH-------GGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAV-EFGVRINAVSP  204 (266)
T ss_dssp             THHHHHHHHHHHHHHHTSSC-------CEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHhcCC-------CeEEEEeCCHHHcCCCCCCchHHHHHHHHHHHHHHHHHHHH-HcCcEEEEEeC
Confidence            99999999999999998631       68999999999999999999999999999999999999999 89999999999


Q ss_pred             CcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       160 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      |+++|++..... ..+.........+.+++.+|+|+|+.+++|+++.+.+++|+++.+|||++
T Consensus       205 G~v~t~~~~~~~-~~~~~~~~~~~~~~~r~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~~  266 (266)
T 3o38_A          205 SIARHKFLEKTS-SSELLDRLASDEAFGRAAEPWEVAATIAFLASDYSSYMTGEVVSVSSQRA  266 (266)
T ss_dssp             CCCCC------------------CCTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESSCCC
T ss_pred             CcccchhhhccC-cHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCccccCccCCEEEEcCCcC
Confidence            999998765432 23444555666788899999999999999999999999999999999963

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=6.2e-37  Score=252.21  Aligned_cols=210  Identities=22%  Similarity=0.297  Sum_probs=192.8

Q ss_pred             CcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHH
Q 025124            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG   82 (257)
Q Consensus         3 r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~   82 (257)
                      |+.+++++..+++.+.+.++.++.+|++|.++++++++++.++++++|+||||||+....++.+.+.++|++++++|+.+
T Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g  125 (256)
T 3ezl_A           46 PNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTS  125 (256)
T ss_dssp             TTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHH
T ss_pred             CCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHH
Confidence            56667778888888888899999999999999999999999999999999999998888889999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcc
Q 025124           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (257)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v  162 (257)
                      ++.++++++|.|.+++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||++++|+||++
T Consensus       126 ~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v  196 (256)
T 3ezl_A          126 LFNVTKQVIDGMVERG--------WGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVA-TKGVTVNTVSPGYI  196 (256)
T ss_dssp             HHHHHHHHHHHHHHHT--------CEEEEEECCCCGGGSCSCCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSB
T ss_pred             HHHHHHHHHHHHHhcC--------CCEEEEEcchhhccCCCCCcccHHHHHHHHHHHHHHHHHHH-HhCCEEEEEEECcc
Confidence            9999999999999876        79999999999999999999999999999999999999999 88999999999999


Q ss_pred             cCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          163 KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       163 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +|++....  ..+....+....+.+++.+|+|+|+.+++|+++.+.+++|+.+.+|||+.+
T Consensus       197 ~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~~~  255 (256)
T 3ezl_A          197 GTDMVKAI--RPDVLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTGADFSLNGGLHM  255 (256)
T ss_dssp             CCHHHHTS--CHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCC
T ss_pred             cCcccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCEeC
Confidence            99876443  345556666778889999999999999999999999999999999999865

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=6.9e-37  Score=252.63  Aligned_cols=213  Identities=26%  Similarity=0.342  Sum_probs=182.4

Q ss_pred             CCcHHH-HHHHHHHHHhc-CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            2 GRRKTV-LRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         2 ~r~~~~-l~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      +|+.++ ++++.+++.+. +.++.++.+|++|+++++++++++.++++++|+||||||+....++.+.+.++|+.++++|
T Consensus        35 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N  114 (260)
T 1x1t_A           35 GFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALN  114 (260)
T ss_dssp             CCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred             eCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHH
Confidence            677777 88888888765 7789999999999999999999999999999999999998777788889999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.+++.++++++|+|++++        .|+||++||..+..+.++...|+++|+++++|+++++.|+. ++||++|+|+|
T Consensus       115 ~~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~P  185 (260)
T 1x1t_A          115 LSAVFHGTAAALPHMKKQG--------FGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETA-GQGITANAICP  185 (260)
T ss_dssp             THHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHT-TTTEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHhcC--------CCEEEEECcHHhCcCCCCCchHHHHHHHHHHHHHHHHHHhc-cCCEEEEEEee
Confidence            9999999999999998876        69999999999999989999999999999999999999999 89999999999


Q ss_pred             CcccCCCCCCCCCh---------HHHHHHh-hhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          160 GPIKDTAGVSKLAP---------EEIRSKA-TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       160 g~v~t~~~~~~~~~---------~~~~~~~-~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      |+++|++.......         ++....+ ....|.+++.+|+|+|+.+++|+++.+.+++|+.+.+|||+.+
T Consensus       186 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG~~~  259 (260)
T 1x1t_A          186 GWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGWTA  259 (260)
T ss_dssp             CCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHHHHHHHHhChhhcCCCCCEEEECCCccC
Confidence            99999975432110         1112222 3446778899999999999999998889999999999999754

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=5.2e-37  Score=254.35  Aligned_cols=212  Identities=33%  Similarity=0.476  Sum_probs=187.2

Q ss_pred             CCcHHHHHHHHHHH-HhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            2 GRRKTVLRSAVAAL-HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~~~l~~~~~~l-~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      +|+.++++++.+++ .+.+.++.++.+|++|+++++++++++.+++|++|+||||||+....++.+.+.++|++++++|+
T Consensus        52 ~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~  131 (267)
T 1vl8_A           52 SRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNL  131 (267)
T ss_dssp             ESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             eCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhh
Confidence            68888898888888 45577899999999999999999999999999999999999987777888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccc-cccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL-HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~-~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      .|++.++++++|.|++++        .|+||++||.. +..+.++...|+++|+++++|+++++.|+. ++||++++|+|
T Consensus       132 ~g~~~l~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~P  202 (267)
T 1vl8_A          132 FGTYYVCREAFSLLRESD--------NPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWG-RYGIRVNVIAP  202 (267)
T ss_dssp             HHHHHHHHHHHHHHTTCS--------SCEEEEECCGGGTCCCSSSCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHcC--------CcEEEEECCcchhccCCCCChhHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEe
Confidence            999999999999998765        68999999998 888888899999999999999999999999 89999999999


Q ss_pred             CcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       160 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      |+++|++........+....+....+.+++.+|+|+|+.+++|+++.+.+++|+.+.+|||+.
T Consensus       203 G~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~  265 (267)
T 1vl8_A          203 GWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGWT  265 (267)
T ss_dssp             CCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             ccCccccccccccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCccccCCcCCeEEECCCCC
Confidence            999998743211112233334455677889999999999999999988999999999999965

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=2.1e-37  Score=255.60  Aligned_cols=212  Identities=25%  Similarity=0.361  Sum_probs=175.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC-CCCCCCCCCHHHHHHHHHHHh
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      .|+.+.++++.+++.+.+.++.++.+|++|+++++++++++.+++|++|++|||||+. ...++.+.+.++|++++++|+
T Consensus        40 ~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~  119 (259)
T 3edm_A           40 NGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNL  119 (259)
T ss_dssp             CSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHT
T ss_pred             CCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHH
Confidence            4677788888999988888999999999999999999999999999999999999976 568889999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccc-cccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~-~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      .|+++++++++|+|.+          .|+||++||..+. .+.++...|+++|+|+++|+++++.|++ +. |+||+|+|
T Consensus       120 ~g~~~~~~~~~~~~~~----------~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~-I~vn~v~P  187 (259)
T 3edm_A          120 TSLFLTAKTALPKMAK----------GGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVG-PK-IRVNAVCP  187 (259)
T ss_dssp             HHHHHHHHHHGGGEEE----------EEEEEEECCHHHHHCCSTTCHHHHHHHHHHHHHHHHHHHHHT-TT-CEEEEEEE
T ss_pred             HHHHHHHHHHHHHHhc----------CCEEEEEcCHHhccCCCCCcHHHHHHHHHHHHHHHHHHHHHC-CC-CEEEEEEE
Confidence            9999999999999865          5889999999988 6788899999999999999999999998 65 99999999


Q ss_pred             CcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCC
Q 025124          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNP  226 (257)
Q Consensus       160 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~  226 (257)
                      |+++|++..... ..+.........+++++.+|+|+|++++||+++.+.+++|+++.+|||.....+
T Consensus       188 G~v~T~~~~~~~-~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGg~~~~~~  253 (259)
T 3edm_A          188 GMISTTFHDTFT-KPEVRERVAGATSLKREGSSEDVAGLVAFLASDDAAYVTGACYDINGGVLFSEG  253 (259)
T ss_dssp             CCBCC-----------------------CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESBCSSBC--
T ss_pred             CCCcCccccccc-ChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCcCCCCC
Confidence            999998764332 234445556677888999999999999999999999999999999999876643

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=8e-37  Score=252.23  Aligned_cols=213  Identities=29%  Similarity=0.424  Sum_probs=188.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHh-CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      +|++++++++.+++.+.+.++.++.+|++|+++++++++++.+++ +++|++|||||+....++.+.+.++|+.++++|+
T Consensus        40 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~  119 (260)
T 2ae2_A           40 SRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINF  119 (260)
T ss_dssp             ESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             eCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhh
Confidence            688899999989888777789999999999999999999999999 8999999999987777888899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .++++++++++|+|++++        .|+||++||..+..+.++...|+++|+++++|+++++.|+. ++||++|+|+||
T Consensus       120 ~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg  190 (260)
T 2ae2_A          120 EAAYHLSVLAHPFLKASE--------RGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWA-KDNIRVNGVGPG  190 (260)
T ss_dssp             HHHHHHHHHHHHHHHHTS--------SEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHhcC--------CcEEEEEcchhhccCCCCcchHHHHHHHHHHHHHHHHHHHh-hcCcEEEEEecC
Confidence            999999999999998875        68999999999998889999999999999999999999999 899999999999


Q ss_pred             cccCCCCCCCCChHHHHH---HhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          161 PIKDTAGVSKLAPEEIRS---KATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +++|++............   ......+.+++.+|+|+|+.+++|+++.+.+++|+.+.+|||..+
T Consensus       191 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~  256 (260)
T 2ae2_A          191 VIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGLMA  256 (260)
T ss_dssp             SBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCCccc
Confidence            999986432111122122   344556778899999999999999998889999999999999754

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-36  Score=252.41  Aligned_cols=213  Identities=27%  Similarity=0.384  Sum_probs=187.1

Q ss_pred             CCcHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEI   78 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~   78 (257)
                      +|++++++++.+++.+.  +.++.++.+|++|+++++++++++.+++|++|+||||||+... .++.+.+.++|++++++
T Consensus        44 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~  123 (267)
T 1iy8_A           44 DVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSI  123 (267)
T ss_dssp             ESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHH
T ss_pred             eCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHH
Confidence            68888999888888766  6789999999999999999999999999999999999998766 67888999999999999


Q ss_pred             HhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      |+.+++.++++++|.|++++        .|+||++||..+..+.++...|+++|+++++|+++++.|+. ++||+||+|+
T Consensus       124 N~~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~  194 (267)
T 1iy8_A          124 NLRGVFLGLEKVLKIMREQG--------SGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYG-RYGIRINAIA  194 (267)
T ss_dssp             HTHHHHHHHHHHHHHHHHHT--------CCEEEEECCGGGTSBCSSBHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEE
T ss_pred             hhHHHHHHHHHHHHHHHHcC--------CCEEEEEcchhhccCCCCCccHHHHHHHHHHHHHHHHHHHH-hcCeEEEEEE
Confidence            99999999999999999876        68999999999999999999999999999999999999999 8999999999


Q ss_pred             cCcccCCCCCCC------CChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          159 PGPIKDTAGVSK------LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       159 Pg~v~t~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ||+++|++....      .......+.+....|.+++.+|+|+|+.+++|+++.+++++|+.+.+|||..+
T Consensus       195 PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~  265 (267)
T 1iy8_A          195 PGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQSA  265 (267)
T ss_dssp             ECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             eCCCcCcchhccccccChhhhhhHHHHHhccCCCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCccc
Confidence            999999864221      00111111334456778899999999999999999889999999999999754

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=1.9e-36  Score=251.18  Aligned_cols=211  Identities=22%  Similarity=0.297  Sum_probs=188.6

Q ss_pred             CcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHH
Q 025124            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG   82 (257)
Q Consensus         3 r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~   82 (257)
                      |+.+.+++..+++...+.++.++.+|++|.++++++++++.++++++|+||||||+....++.+.+.++|+.++++|+.+
T Consensus        58 ~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~  137 (269)
T 3gk3_A           58 ERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDA  137 (269)
T ss_dssp             SCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHH
T ss_pred             CchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHH
Confidence            66777888888888778899999999999999999999999999999999999998888889999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcc
Q 025124           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (257)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v  162 (257)
                      ++.++++++|.|.+++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+|++|+||++
T Consensus       138 ~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v  208 (269)
T 3gk3_A          138 MFNVTKQFIAGMVERR--------FGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETA-KRGITVNTVSPGYL  208 (269)
T ss_dssp             HHHHHHHHHHHHHHHT--------CEEEEEECCHHHHHCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSB
T ss_pred             HHHHHHHHHHHHHhcC--------CCEEEEeCChhhccCCCCcchHHHHHHHHHHHHHHHHHHhh-hcCCEEEEEecCcc
Confidence            9999999999999876        79999999999999999999999999999999999999999 88999999999999


Q ss_pred             cCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          163 KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       163 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +|++..... ............+.+++.+|+|+|+.+++|+++.+.+++|+.+.+|||+.+
T Consensus       209 ~T~~~~~~~-~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~  268 (269)
T 3gk3_A          209 ATAMVEAVP-QDVLEAKILPQIPVGRLGRPDEVAALIAFLCSDDAGFVTGADLAINGGMHM  268 (269)
T ss_dssp             CCTTTTC--------CCSGGGCTTSSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTSCC
T ss_pred             cchhhhhhc-hhHHHHHhhhcCCcCCccCHHHHHHHHHHHhCCCcCCeeCcEEEECCCEeC
Confidence            998764432 122222455667888899999999999999999999999999999999765

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=1.9e-37  Score=260.40  Aligned_cols=208  Identities=27%  Similarity=0.345  Sum_probs=186.0

Q ss_pred             HHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHHHhHHH
Q 025124            5 KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGT   83 (257)
Q Consensus         5 ~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~   83 (257)
                      .+.++++.+.+.+.+.++.++.+|++|+++++++++++.+++|++|++|||||... ..++.+.+.++|++.+++|+.|+
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~  164 (294)
T 3r3s_A           85 EEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFAL  164 (294)
T ss_dssp             HHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHH
T ss_pred             hhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHH
Confidence            45677888888888889999999999999999999999999999999999999765 46788999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccc
Q 025124           84 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK  163 (257)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~  163 (257)
                      ++++++++|.|.+          .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||+++
T Consensus       165 ~~l~~~~~~~~~~----------~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~  233 (294)
T 3r3s_A          165 FWITQEAIPLLPK----------GASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVA-EKGIRVNIVAPGPIW  233 (294)
T ss_dssp             HHHHHHHGGGCCT----------TCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBC
T ss_pred             HHHHHHHHHHhhc----------CCEEEEECChhhccCCCCchHHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCcCc
Confidence            9999999998854          58999999999999999999999999999999999999999 899999999999999


Q ss_pred             CCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          164 DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       164 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      |++........+....+....+.+++.+|+|+|++++||+++.+++++|+++.+|||.++
T Consensus       234 t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~l  293 (294)
T 3r3s_A          234 TALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGGEHL  293 (294)
T ss_dssp             SHHHHTTTSCGGGSTTTTTTSTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             cccccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            987433322333344556667889999999999999999999999999999999999865

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=7.3e-37  Score=251.94  Aligned_cols=214  Identities=25%  Similarity=0.334  Sum_probs=187.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.+++.+.+.++.++.+|++|.++++++++++.+++|++|+||||||.....++.+.+.++|++.+++|+.
T Consensus        33 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~  112 (256)
T 1geg_A           33 DYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVK  112 (256)
T ss_dssp             ESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTH
T ss_pred             eCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            68888999999998887788999999999999999999999999999999999999877778888999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.++++++|.|.+++.       .|+||++||..+..+.++...|+++|+++++|+++++.|+. ++||+||+|+||+
T Consensus       113 g~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~  184 (256)
T 1geg_A          113 GVIWGIQAAVEAFKKEGH-------GGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLA-PLGITVNGYCPGI  184 (256)
T ss_dssp             HHHHHHHHHHHHHHHHTS-------CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECS
T ss_pred             HHHHHHHHHHHHHHhcCC-------CCEEEEECchhhcCCCCCchhHHHHHHHHHHHHHHHHHHHH-HcCeEEEEEEECC
Confidence            999999999999987531       37999999999999999999999999999999999999999 8999999999999


Q ss_pred             ccCCCCCCCC---------ChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          162 IKDTAGVSKL---------APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       162 v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ++|++.....         ........+....|.+++.+|+|+|+.+++|+++.+.+++|+.+.+|||..+
T Consensus       185 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~  255 (256)
T 1geg_A          185 VKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGMVF  255 (256)
T ss_dssp             BSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSSC
T ss_pred             CccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCCccC
Confidence            9998642110         0111223334456778899999999999999999889999999999999753

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=2.8e-36  Score=252.97  Aligned_cols=215  Identities=21%  Similarity=0.304  Sum_probs=187.0

Q ss_pred             CcHHHHHHHHHHHH-hcCCCeEEEEccCCCHH-----------------HHHHHHHHHHHHhCCccEEEeCCCCCCCCCC
Q 025124            3 RRKTVLRSAVAALH-SLGIPAIGLEGDVRKRE-----------------DAVRVVESTINHFGKLDILVNAAAGNFLVPA   64 (257)
Q Consensus         3 r~~~~l~~~~~~l~-~~~~~~~~~~~Dls~~~-----------------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~   64 (257)
                      |+.++++++.+++. +.+.++.++.+|+++++                 +++++++++.+++|++|+||||||+....++
T Consensus        42 r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~  121 (291)
T 1e7w_A           42 RSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPL  121 (291)
T ss_dssp             SCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCC
T ss_pred             CCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCh
Confidence            88999999999987 55778999999999999                 9999999999999999999999998777788


Q ss_pred             CCCC--------------HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHH
Q 025124           65 EDLS--------------PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA  130 (257)
Q Consensus        65 ~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~  130 (257)
                      .+.+              .++|+.++++|+.+++.++++++|.|.+++..  .....|+||++||..+..+.++...|++
T Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~--~~~~~g~Iv~isS~~~~~~~~~~~~Y~a  199 (291)
T 1e7w_A          122 LRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAK--HRGTNYSIINMVDAMTNQPLLGYTIYTM  199 (291)
T ss_dssp             CC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGG--GSCSCEEEEEECCTTTTSCCTTCHHHHH
T ss_pred             hhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC--CCCCCcEEEEEechhhcCCCCCCchhHH
Confidence            8888              99999999999999999999999999875300  0000389999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHHHHhhhhccCC-CCCCHHhHHHHHHHhccCCCCc
Q 025124          131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-KFGEKWDIAMAALYLASDAGKY  209 (257)
Q Consensus       131 sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~~~~~l~~~~~~~  209 (257)
                      +|+++++|+++++.|+. ++||+||+|+||+++|++ .  .. +.....+....|++ ++.+|+|+|+.++||+++.+.+
T Consensus       200 sKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~-~--~~-~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~  274 (291)
T 1e7w_A          200 AKGALEGLTRSAALELA-PLQIRVNGVGPGLSVLVD-D--MP-PAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKY  274 (291)
T ss_dssp             HHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBCCGG-G--SC-HHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHH-hcCeEEEEEeeCCccCCc-c--CC-HHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCCcccC
Confidence            99999999999999999 899999999999999997 3  22 33344455556777 8999999999999999998999


Q ss_pred             ccCcEEEecCCcccC
Q 025124          210 VNGNTLIVDGGNWLS  224 (257)
Q Consensus       210 ~~G~~~~~dgg~~~~  224 (257)
                      ++|+.+.+|||+.+.
T Consensus       275 itG~~i~vdGG~~~~  289 (291)
T 1e7w_A          275 ITGTCVKVDGGYSLT  289 (291)
T ss_dssp             CCSCEEEESTTGGGC
T ss_pred             ccCcEEEECCCcccc
Confidence            999999999998764

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=1.5e-36  Score=250.94  Aligned_cols=213  Identities=25%  Similarity=0.310  Sum_probs=187.9

Q ss_pred             CCcHHHHHHHHHHHHhc-CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            2 GRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      +|+.++++++.+++.+. +.++.++.+|++|+++++++++++.++++++|+||||||+....++.+.+.++|+..+++|+
T Consensus        38 ~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~  117 (263)
T 3ai3_A           38 ARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLV  117 (263)
T ss_dssp             ESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHT
T ss_pred             cCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHh
Confidence            68888899888888766 77899999999999999999999999999999999999988778889999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .+++.++++++|.|++++        .|+||++||..+..+.++...|+++|+++++|+++++.|+. ++||++++|+||
T Consensus       118 ~~~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg  188 (263)
T 3ai3_A          118 MAAVRLARGLVPGMRARG--------GGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVI-KDNIRVNCINPG  188 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHcC--------CcEEEEECchhhcCCCCCcchHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEecC
Confidence            999999999999998875        68999999999999888999999999999999999999999 899999999999


Q ss_pred             cccCCCCCCCCC---------hHHHHHHhhhh-ccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          161 PIKDTAGVSKLA---------PEEIRSKATDY-MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       161 ~v~t~~~~~~~~---------~~~~~~~~~~~-~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +++|++......         ........... .|.+++.+|+|+|+++++|+++.+.+++|+.+.+|||..+
T Consensus       189 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~  261 (263)
T 3ai3_A          189 LILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLCSERATYSVGSAYFVDGGMLK  261 (263)
T ss_dssp             CBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTCCC
T ss_pred             cccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCCCCcEEEECCCccc
Confidence            999986421100         11222233333 6778899999999999999998889999999999999754

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=2e-36  Score=251.35  Aligned_cols=211  Identities=26%  Similarity=0.361  Sum_probs=186.4

Q ss_pred             CC-cHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            2 GR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r-~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      +| +.+.++++.+++.+.+.++.++.+|++|.++++++++++.+.++++|++|||||+....++.+.+.++|++.+++|+
T Consensus        60 ~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~  139 (271)
T 4iin_A           60 YRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNL  139 (271)
T ss_dssp             ESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             eCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhcc
Confidence            45 56677888888888888999999999999999999999999999999999999998888888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .+++.+++.++|.|.+++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+|++|+||
T Consensus       140 ~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG  210 (271)
T 4iin_A          140 TSAFIGCREALKVMSKSR--------FGSVVNVASIIGERGNMGQTNYSASKGGMIAMSKSFAYEGA-LRNIRFNSVTPG  210 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHH-TTTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHhhcC--------CCEEEEEechhhcCCCCCchHhHHHHHHHHHHHHHHHHHHH-HhCcEEEEEEeC
Confidence            999999999999999876        79999999999999999999999999999999999999999 889999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ++.|++....  .......+....+.+++.+|+|+|+++++|+++.+.+++|+.+.+|||+++
T Consensus       211 ~v~T~~~~~~--~~~~~~~~~~~~~~~~~~~p~dvA~~i~~l~s~~~~~itG~~i~vdGG~~~  271 (271)
T 4iin_A          211 FIETDMNANL--KDELKADYVKNIPLNRLGSAKEVAEAVAFLLSDHSSYITGETLKVNGGLYM  271 (271)
T ss_dssp             SBCCC--------------CGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCC
T ss_pred             cccCCchhhh--cHHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCCCcCCCcCCEEEeCCCeeC
Confidence            9999875432  233445566677888999999999999999999999999999999999764

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.3e-36  Score=248.74  Aligned_cols=207  Identities=19%  Similarity=0.159  Sum_probs=181.4

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHHHh
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~   80 (257)
                      +|++++++++.+++   +.++.++.+|++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+
T Consensus        35 ~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~  111 (254)
T 3kzv_A           35 ARSEAPLKKLKEKY---GDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINF  111 (254)
T ss_dssp             ESCHHHHHHHHHHH---GGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHT
T ss_pred             cCCHHHHHHHHHHh---CCceEEEECCCCCHHHHHHHHHHHHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhh
Confidence            58888888877665   467999999999999999999999999999999999999854 47889999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .|+++++++++|+|+++         +|+||++||..+..+.++...|+++|+|+++|+++++.|+   .||+||+|+||
T Consensus       112 ~g~~~~~~~~~~~m~~~---------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~---~~i~vn~v~PG  179 (254)
T 3kzv_A          112 FSIVSLVGIALPELKKT---------NGNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANEE---RQVKAIAVAPG  179 (254)
T ss_dssp             HHHHHHHHHHHHHHHHH---------TCEEEEECCSCCCCSSCCSHHHHHHHHHHHHHHHHHHHHC---TTSEEEEEECS
T ss_pred             HHHHHHHHHHHHHHHhc---------CCeEEEEcCchhccCCCCcchHHHHHHHHHHHHHHHHhhc---cCcEEEEEeCC
Confidence            99999999999999876         5899999999999999999999999999999999999997   37999999999


Q ss_pred             cccCCCCCCCCC-------hHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCC-CCcccCcEEEecCCccc
Q 025124          161 PIKDTAGVSKLA-------PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA-GKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       161 ~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~-~~~~~G~~~~~dgg~~~  223 (257)
                      +++|++......       ..+....+....+.+++.+|+|+|+.++||+++. +++++|+.+.+|||...
T Consensus       180 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg~~~~  250 (254)
T 3kzv_A          180 IVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHGIPDGVNGQYLSYNDPALA  250 (254)
T ss_dssp             SCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHHHHHHHHHCCCGGGTTCEEETTCGGGG
T ss_pred             cccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcccHHHHHHHHHhhcccCCCCccEEEecCcccc
Confidence            999998654321       3455666777788999999999999999999998 49999999999999764

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=2.7e-36  Score=249.02  Aligned_cols=213  Identities=26%  Similarity=0.361  Sum_probs=188.0

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHHHh
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~   80 (257)
                      +|+.++++++.+++.+.+.++.++.+|++|.++++++++++.+.+|++|+||||||+.. ..++.+.+.++|+..+++|+
T Consensus        45 ~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~  124 (260)
T 2zat_A           45 SRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNV  124 (260)
T ss_dssp             ESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHT
T ss_pred             eCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHh
Confidence            68888999998999887888999999999999999999999999999999999999754 46778899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .+++.++++++|+|++++        .|+||++||..+..+.++...|+++|+++++|+++++.|+. ++||++|+|+||
T Consensus       125 ~~~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg  195 (260)
T 2zat_A          125 KATVLMTKAVVPEMEKRG--------GGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELA-PRNIRVNCLAPG  195 (260)
T ss_dssp             HHHHHHHHHHHHHHHHTT--------CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHcC--------CCEEEEEechhhcCCCCCchhHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEEC
Confidence            999999999999998876        68999999999999989999999999999999999999999 899999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ++.|++..................+.+++.+|+|+|+.+++|+++.+++++|+.+.+|||...
T Consensus       196 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~  258 (260)
T 2zat_A          196 LIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDASYITGETVVVGGGTAS  258 (260)
T ss_dssp             SBCSSTTHHHHSSHHHHHHHHHHHTCSSCBCGGGGHHHHHHHTSGGGTTCCSCEEEESTTCCC
T ss_pred             cccCccchhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCccCCEEEECCCccc
Confidence            999986432111122223344556778899999999999999999889999999999999654

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=3e-36  Score=251.16  Aligned_cols=207  Identities=26%  Similarity=0.348  Sum_probs=177.9

Q ss_pred             cHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHH
Q 025124            4 RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT   83 (257)
Q Consensus         4 ~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~   83 (257)
                      +.++++++.+++.+.+.++.++.+|++|+++++++++++.+++|++|+||||||+.....    +.++|++++++|+.++
T Consensus        58 ~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~----~~~~~~~~~~~N~~g~  133 (278)
T 3sx2_A           58 TPEELAATVKLVEDIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAPMSA----GDDGWHDVIDVNLTGV  133 (278)
T ss_dssp             CHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCSS----THHHHHHHHHHHTHHH
T ss_pred             chHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC----CHHHHHHHHHHHhHHH
Confidence            478888888888888889999999999999999999999999999999999999765433    5899999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccccc----ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           84 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~----~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      ++++++++|+|.+++.       .|+||++||..+..+.    ++...|+++|+|+++|+++++.|+. ++||+||+|+|
T Consensus       134 ~~l~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~P  205 (278)
T 3sx2_A          134 YHTIKVAIPTLVKQGT-------GGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLA-GQMIRVNSIHP  205 (278)
T ss_dssp             HHHHHHHHHHHHHHCS-------CEEEEEECCGGGTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEE
T ss_pred             HHHHHHHHHHHHhCCC-------CcEEEEEccHHhcCCCccCCCCchHhHHHHHHHHHHHHHHHHHHh-ccCcEEEEEec
Confidence            9999999999988642       5899999999998877    7788999999999999999999999 89999999999


Q ss_pred             CcccCCCCCCCCChHHHHH---------HhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          160 GPIKDTAGVSKLAPEEIRS---------KATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       160 g~v~t~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      |+++|++............         ......+ .++.+|+|+|+.++||+++.+++++|+++.+|||+++
T Consensus       206 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~~  277 (278)
T 3sx2_A          206 SGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP-VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFLN  277 (278)
T ss_dssp             SCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS-CSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             CCccCccchhhhHHHHHhhccchhhhhhhhhhhcC-cCcCCHHHHHHHHHHHhCcccccccCCEEeECCCccc
Confidence            9999997643221111111         1112233 5788999999999999999999999999999999764

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=7.2e-36  Score=247.43  Aligned_cols=208  Identities=26%  Similarity=0.272  Sum_probs=191.5

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.+++++..+++.+.+.++.++.+|++|+++++++++++.++++++|++|||||+....++.+.+.++|+..+++|+.
T Consensus        58 ~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~  137 (267)
T 4iiu_A           58 HRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLD  137 (267)
T ss_dssp             SSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTH
T ss_pred             CCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhH
Confidence            57888999999999988889999999999999999999999999999999999999888888889999999999999999


Q ss_pred             HHHHHHHHHHHHHHh-cCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           82 GTFIMCHEALKYLKK-GGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~-~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      +++.+++.+++.|.+ +.        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||++++|+||
T Consensus       138 g~~~l~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG  208 (267)
T 4iiu_A          138 SFYNVIQPCIMPMIGARQ--------GGRIITLSSVSGVMGNRGQVNYSAAKAGIIGATKALAIELA-KRKITVNCIAPG  208 (267)
T ss_dssp             HHHHHHHHHHHHHHHHTS--------CEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHhcCC--------CcEEEEEcchHhccCCCCCchhHHHHHHHHHHHHHHHHHHh-hcCeEEEEEEEe
Confidence            999999999999874 43        78999999999999999999999999999999999999999 889999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                      +++|++....   ...........+.+++.+|+|+|+++++|+++.+.+++|+.+.+|||+
T Consensus       209 ~v~t~~~~~~---~~~~~~~~~~~p~~~~~~~edva~~~~~L~s~~~~~itG~~i~vdGG~  266 (267)
T 4iiu_A          209 LIDTGMIEME---ESALKEAMSMIPMKRMGQAEEVAGLASYLMSDIAGYVTRQVISINGGM  266 (267)
T ss_dssp             SBCSTTCCCC---HHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             eecCCccccc---HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCccCCEEEeCCCc
Confidence            9999876433   444556667778889999999999999999999999999999999996

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=2.1e-36  Score=249.74  Aligned_cols=217  Identities=27%  Similarity=0.364  Sum_probs=175.4

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n   79 (257)
                      ++|++++++++.+++   +.++.++.+|++|.++++++++++.++++++|++|||||+.. ..++.+.+.++|++.+++|
T Consensus        39 ~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N  115 (261)
T 3n74_A           39 VDRDKAGAERVAGEI---GDAALAVAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVN  115 (261)
T ss_dssp             EESCHHHHHHHHHHH---CTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHH
T ss_pred             EcCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHh
Confidence            368888888887765   567999999999999999999999999999999999999766 5777888999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.++++++++++|+|.++..+    ...++||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+|++|+|
T Consensus       116 ~~g~~~l~~~~~~~~~~~~~~----~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~P  190 (261)
T 3n74_A          116 VRGVYLMTSKLIPHFKENGAK----GQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELA-PAKIRVVALNP  190 (261)
T ss_dssp             THHHHHHHHHHHHHHHHHHHT----TCCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHhcCCC----CCCeEEEEeCchhhcCCCCCccHHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEec
Confidence            999999999999999875310    0157899999999999999999999999999999999999999 89999999999


Q ss_pred             CcccCCCCCCCCC--hHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCC
Q 025124          160 GPIKDTAGVSKLA--PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSN  225 (257)
Q Consensus       160 g~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~  225 (257)
                      |+++|++......  ..+....+....+.+++.+|+|+|+++++|+++.+.+++|+.+.+|||..+..
T Consensus       191 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~~~  258 (261)
T 3n74_A          191 VAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQASMITGVALDVDGGRSIGG  258 (261)
T ss_dssp             C-------------------------CTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTC--
T ss_pred             CcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHHHHHHHcCCcccCcCCcEEEecCCcccCC
Confidence            9999997654331  23344556667788899999999999999999999999999999999988764

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=2.3e-36  Score=250.22  Aligned_cols=217  Identities=19%  Similarity=0.184  Sum_probs=190.3

Q ss_pred             CCcHHHHHHHHHHHHhcCC-CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC----CCCCCCCCHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF----LVPAEDLSPNGFRTVI   76 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~-~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~----~~~~~~~~~~~~~~~~   76 (257)
                      +|+....+.+.+...+.+. ++.++.+|++|.++++++++++.++++++|++|||||+..    ..++.+.+.++|+..+
T Consensus        40 ~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~  119 (266)
T 3oig_A           40 YAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAH  119 (266)
T ss_dssp             ESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHH
T ss_pred             cCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHH
Confidence            4565444555555555444 7999999999999999999999999999999999999876    4677889999999999


Q ss_pred             HHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEE
Q 025124           77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (257)
Q Consensus        77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~  156 (257)
                      ++|+.+++.++++++|.|++          .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+|++
T Consensus       120 ~~n~~~~~~l~~~~~~~~~~----------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~  188 (266)
T 3oig_A          120 NISSYSLTAVVKAARPMMTE----------GGSIVTLTYLGGELVMPNYNVMGVAKASLDASVKYLAADLG-KENIRVNS  188 (266)
T ss_dssp             HHHTHHHHHHHHHHGGGCTT----------CEEEEEEECGGGTSCCTTTHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEE
T ss_pred             HHhHHHHHHHHHHHHhhcCC----------CceEEEEecccccccCCCcchhHHHHHHHHHHHHHHHHHHh-hcCcEEEE
Confidence            99999999999999999864          68999999999999999999999999999999999999999 89999999


Q ss_pred             EecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCC
Q 025124          157 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDL  229 (257)
Q Consensus       157 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~  229 (257)
                      |+||+++|++..................+.+++.+|+|+|+.+++|+++.+.+++|+.+.+|||+....+..-
T Consensus       189 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdGG~~~~~~~~~  261 (266)
T 3oig_A          189 ISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTAAFLFSDMSRGITGENLHVDSGFHITARLEH  261 (266)
T ss_dssp             EEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCCCC-
T ss_pred             EecCcccccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCchhcCcCCEEEECCCeEEeeecCC
Confidence            9999999987765544456666777788889999999999999999999899999999999999988766543

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=5.5e-36  Score=245.17  Aligned_cols=207  Identities=29%  Similarity=0.425  Sum_probs=182.2

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.+++   +  +.++.+|++|+++++++++++.+++|++|+||||||+....++.+.+.++|++++++|+.
T Consensus        36 ~r~~~~~~~~~~~~---~--~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~  110 (245)
T 1uls_A           36 DIEEGPLREAAEAV---G--AHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLT  110 (245)
T ss_dssp             ESCHHHHHHHHHTT---T--CEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHH
T ss_pred             eCCHHHHHHHHHHc---C--CEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhH
Confidence            57877777665543   2  788999999999999999999999999999999999887788889999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.++++++|+|++++        .|+||++||.. ..+.++...|+++|+++++|+++++.|+. ++||++|+|+||+
T Consensus       111 g~~~l~~~~~~~m~~~~--------~g~iv~isS~~-~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~  180 (245)
T 1uls_A          111 GSFLVAKAASEAMREKN--------PGSIVLTASRV-YLGNLGQANYAASMAGVVGLTRTLALELG-RWGIRVNTLAPGF  180 (245)
T ss_dssp             HHHHHHHHHHHHHTTTC--------CEEEEEECCGG-GGCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECS
T ss_pred             HHHHHHHHHHHHHHhcC--------CCEEEEEccch-hcCCCCchhHHHHHHHHHHHHHHHHHHHh-HhCeEEEEEEeCc
Confidence            99999999999998765        69999999998 88888899999999999999999999999 8999999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCC
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSN  225 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~  225 (257)
                      ++|++... . ............+.+++.+|+|+|+.+++|+++.+.+++|+.+.+|||..+..
T Consensus       181 v~t~~~~~-~-~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~~~  242 (245)
T 1uls_A          181 IETRMTAK-V-PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQVLFVDGGRTIGA  242 (245)
T ss_dssp             BCCTTTSS-S-CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTTTC
T ss_pred             CcCcchhh-c-CHHHHHHHHhhCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECCCcccCC
Confidence            99987543 2 23333444455677889999999999999999888999999999999977643

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.8e-36  Score=252.28  Aligned_cols=215  Identities=25%  Similarity=0.348  Sum_probs=185.3

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|+.++++++.+++.+.+ ++.++.+|++|+++++++++++.++++++|+||||||+....++.+.+.++|++.+++|+
T Consensus        59 ~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~  137 (276)
T 2b4q_A           59 CARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNV  137 (276)
T ss_dssp             ECSCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHT
T ss_pred             EeCCHHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHh
Confidence            3788889998888887655 889999999999999999999999999999999999988778888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccch-hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI-HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~-~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      .+++.++++++|.|++++...    ..|+||++||..+..+.++.. .|+++|+++++|+++++.|+. ++||+||+|+|
T Consensus       138 ~g~~~l~~~~~~~m~~~~~~~----~~g~iV~isS~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gI~vn~v~P  212 (276)
T 2b4q_A          138 TSVFSCIQQLLPLLRRSASAE----NPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELV-GEHINVNVIAP  212 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHCCSS----SCEEEEEECCGGGTCCCCCSCTTHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHhccCCC----CCCEEEEECCHHHcCCCCCCccccHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEe
Confidence            999999999999998765100    028999999999988888888 999999999999999999999 88999999999


Q ss_pred             CcccCCCCCCCCChHHHHHHhhh--hccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          160 GPIKDTAGVSKLAPEEIRSKATD--YMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       160 g~v~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      |+++|++.....  .........  ..+.+++.+|+|+|+.+++|+++.+.+++|+.+.+|||+.+
T Consensus       213 G~v~T~~~~~~~--~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~L  276 (276)
T 2b4q_A          213 GRFPSRMTRHIA--NDPQALEADSASIPMGRWGRPEEMAALAISLAGTAGAYMTGNVIPIDGGFHL  276 (276)
T ss_dssp             CCCCSTTTHHHH--HCHHHHHHHHHTSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             ccCcCcchhhcc--hhHHHHHHhhcCCCCCCcCCHHHHHHHHHHHhCccccCCCCCEEEeCCCccC
Confidence            999998642210  011122333  56778899999999999999998889999999999999753

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=4.2e-36  Score=246.45  Aligned_cols=208  Identities=28%  Similarity=0.380  Sum_probs=173.7

Q ss_pred             CCcH-HHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            2 GRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~-~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      +|+. +++++   ++.+.+.++.++.+|++|+++++++++++.++++++|+||||||+....++.+.+.++|++.+++|+
T Consensus        38 ~r~~~~~~~~---~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~  114 (249)
T 2ew8_A           38 DLVPAPEAEA---AIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINV  114 (249)
T ss_dssp             ESSCCHHHHH---HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             cCCchhHHHH---HHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHh
Confidence            4666 55554   4555577899999999999999999999999999999999999987777888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .+++.++++++|.|++++        .|+||++||..+..+.++...|+++|+++++|+++++.|+. ++||++|+|+||
T Consensus       115 ~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~Pg  185 (249)
T 2ew8_A          115 DSGFLMAKAFVPGMKRNG--------WGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLG-KDGITVNAIAPS  185 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGGSCCSSCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHcC--------CeEEEEEcchhhccCCCCchhHHHHHHHHHHHHHHHHHHHH-hcCcEEEEEecC
Confidence            999999999999999876        69999999999999999999999999999999999999999 899999999999


Q ss_pred             cccCCCCCCCCChH--HHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          161 PIKDTAGVSKLAPE--EIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       161 ~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +++|++........  +....+.  .+.+++.+|+|+|+.+++|+++.+++++|+.+.+|||...
T Consensus       186 ~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdGG~~~  248 (249)
T 2ew8_A          186 LVRTATTEASALSAMFDVLPNML--QAIPRLQVPLDLTGAAAFLASDDASFITGQTLAVDGGMVR  248 (249)
T ss_dssp             CC------------------CTT--SSSCSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSSCCC
T ss_pred             cCcCccchhccccchhhHHHHhh--CccCCCCCHHHHHHHHHHHcCcccCCCCCcEEEECCCccC
Confidence            99998754111101  1111111  5677899999999999999998889999999999999653

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=6.1e-36  Score=247.75  Aligned_cols=203  Identities=28%  Similarity=0.368  Sum_probs=182.9

Q ss_pred             HHHHHHHHhc-CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHH
Q 025124            9 RSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC   87 (257)
Q Consensus         9 ~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~   87 (257)
                      ++..+++.+. +.++.++.+|++|+++++++++++.+++++||+||||||+....++.+.+.++|++.+++|+.++++++
T Consensus        61 ~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  140 (267)
T 3gdg_A           61 EENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCA  140 (267)
T ss_dssp             HHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHH
T ss_pred             HHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHH
Confidence            5666666544 788999999999999999999999999999999999999888888999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCCCCCCCceEEEEccccccccc--ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCC
Q 025124           88 HEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT  165 (257)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~--~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~  165 (257)
                      ++++|+|++++        .|+||++||..+..+.  ++...|+++|+|+++|+++++.|+. +. |+|++|+||++.|+
T Consensus       141 ~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~-i~v~~v~PG~v~t~  210 (267)
T 3gdg_A          141 KAVGHHFKERG--------TGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEWR-DF-ARVNSISPGYIDTG  210 (267)
T ss_dssp             HHHHHHHHHHT--------CCEEEEECCGGGTSCCSSSCCHHHHHHHHHHHHHHHHHHHHTT-TT-CEEEEEEECCEECS
T ss_pred             HHHHHHHHHcC--------CceEEEEccccccccCCCCCCCcchHHHHHHHHHHHHHHHHhc-cC-cEEEEEECCccccc
Confidence            99999999876        7899999999988776  5788999999999999999999998 66 99999999999998


Q ss_pred             CCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          166 AGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +....  ..+....+....+.+++.+|+|+|+.+++|+++.+.+++|+.+.+|||+++
T Consensus       211 ~~~~~--~~~~~~~~~~~~~~~r~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~  266 (267)
T 3gdg_A          211 LSDFV--PKETQQLWHSMIPMGRDGLAKELKGAYVYFASDASTYTTGADLLIDGGYTT  266 (267)
T ss_dssp             CGGGS--CHHHHHHHHTTSTTSSCEETHHHHHHHHHHHSTTCTTCCSCEEEESTTGGG
T ss_pred             hhhhC--CHHHHHHHHhcCCCCCCcCHHHHHhHhheeecCccccccCCEEEECCceec
Confidence            75432  345556667778899999999999999999999999999999999999865

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.4e-36  Score=250.38  Aligned_cols=213  Identities=21%  Similarity=0.285  Sum_probs=166.5

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCC----CCCHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAE----DLSPNGFRTVIE   77 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~----~~~~~~~~~~~~   77 (257)
                      +|+.++++++.+++   +.++.++.+|++|+++++++++++.+++|++|++|||||+.....+.    +.+.++|++.++
T Consensus        38 ~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~  114 (257)
T 3tpc_A           38 DLKPPAGEEPAAEL---GAAVRFRNADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVA  114 (257)
T ss_dssp             ESSCC---------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHH
T ss_pred             eCChHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHH
Confidence            56777777666655   45789999999999999999999999999999999999987655443    678999999999


Q ss_pred             HHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEE
Q 025124           78 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (257)
Q Consensus        78 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v  157 (257)
                      +|+.++++++++++|+|.++...  .....|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|
T Consensus       115 vN~~g~~~l~~~~~~~m~~~~~~--~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v  191 (257)
T 3tpc_A          115 VNLIGTFNMIRLAAEVMSQGEPD--ADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAARELA-RFGIRVVTI  191 (257)
T ss_dssp             HHTHHHHHHHHHHHHHHTTSCCC--TTSCCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEE
T ss_pred             HHhHHHHHHHHHHHHHHHhcccc--CCCCCeEEEEEechhhccCCCCCcchHHHHHHHHHHHHHHHHHHH-HcCeEEEEE
Confidence            99999999999999999875210  001168999999999999999999999999999999999999999 899999999


Q ss_pred             ecCcccCCCCCCCCChHHHHHHhhhhccC-CCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          158 APGPIKDTAGVSKLAPEEIRSKATDYMAA-YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       158 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      +||+++|++....  ..+.........+. +++.+|+|+|+++++|+++  .+++|+.+.+|||+.+.
T Consensus       192 ~PG~v~t~~~~~~--~~~~~~~~~~~~p~~~r~~~~~dva~~v~~l~s~--~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          192 APGIFDTPMMAGM--PQDVQDALAASVPFPPRLGRAEEYAALVKHICEN--TMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             EECCBSCC----------------CCSSSSCSCBCHHHHHHHHHHHHHC--TTCCSCEEEESTTCCC-
T ss_pred             EeCCCCChhhccC--CHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHccc--CCcCCcEEEECCCccCC
Confidence            9999999876432  23334445556676 8899999999999999975  78999999999998765

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=5.4e-36  Score=246.22  Aligned_cols=203  Identities=20%  Similarity=0.246  Sum_probs=179.2

Q ss_pred             CCCcHHHHHHHHHHHHhcC-CCeEEEEccC--CCHHHHHHHHHHHHHHhCCccEEEeCCCCC-CCCCCCCCCHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLG-IPAIGLEGDV--RKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVI   76 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~-~~~~~~~~Dl--s~~~~~~~~~~~~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~   76 (257)
                      ++|+.++++++.+++.+.+ .++.++.+|+  +|.++++++++++.+++|++|+||||||+. ...++.+.+.++|++++
T Consensus        42 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~  121 (252)
T 3f1l_A           42 LGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVM  121 (252)
T ss_dssp             EESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHH
T ss_pred             EeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHH
Confidence            3689999999999998764 4889999999  999999999999999999999999999975 45788999999999999


Q ss_pred             HHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEE
Q 025124           77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (257)
Q Consensus        77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~  156 (257)
                      ++|+.|+++++++++|+|++++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. +. |+||+
T Consensus       122 ~~N~~g~~~~~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~-~~-irvn~  191 (252)
T 3f1l_A          122 QVNVNATFMLTQALLPLLLKSD--------AGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQ-QR-LRVNC  191 (252)
T ss_dssp             HHHTHHHHHHHHHHHHHHHTSS--------SCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTT-TT-CEEEE
T ss_pred             hhhhHHHHHHHHHHHHHHHHCC--------CCEEEEECChhhccCCCCCchhHHHHHHHHHHHHHHHHHhc-CC-cEEEE
Confidence            9999999999999999999876        79999999999999999999999999999999999999998 66 99999


Q ss_pred             EecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          157 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       157 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      |+||+++|++..          ......+..++.+|+|+++.++||+++.+++++|+.+.+|||...
T Consensus       192 v~PG~v~t~~~~----------~~~~~~~~~~~~~p~dva~~~~~L~s~~~~~itG~~i~vdgG~~~  248 (252)
T 3f1l_A          192 INPGGTRTAMRA----------SAFPTEDPQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQPGRKP  248 (252)
T ss_dssp             EECCSBSSHHHH----------HHCTTCCGGGSBCTGGGHHHHHHHHSGGGTTCCSCEEESSCC---
T ss_pred             EecCcccCchhh----------hhCCccchhccCCHHHHHHHHHHHcCccccCCCCCEEEeCCCcCC
Confidence            999999987531          111122234578999999999999999999999999999999643

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=1.5e-36  Score=251.52  Aligned_cols=210  Identities=22%  Similarity=0.235  Sum_probs=181.4

Q ss_pred             CCCcHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI   78 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~   78 (257)
                      ++|+.++++++.+++.+.  +.++.++.+|++++++++++++    +++++|++|||||+....++.+.+.++|++.+++
T Consensus        40 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~v  115 (267)
T 3t4x_A           40 NGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE----KYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEV  115 (267)
T ss_dssp             EESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH----HCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHH
T ss_pred             EeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH----hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHH
Confidence            368899999999999876  3567889999999999877654    5799999999999888888999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      |+.+++.++++++|+|++++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+
T Consensus       116 N~~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~  186 (267)
T 3t4x_A          116 NIMSGVRLTRSYLKKMIERK--------EGRVIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELTT-GTNVTVNTIM  186 (267)
T ss_dssp             HTHHHHHHHHHHHHHHHHTT--------EEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTT-TSEEEEEEEE
T ss_pred             HhHHHHHHHHHHHHHHHhCC--------CCEEEEEcchhhccCCCcchHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEEe
Confidence            99999999999999999876        79999999999999999999999999999999999999999 8999999999


Q ss_pred             cCcccCCCCCCC---------CChHHHHHH----hhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          159 PGPIKDTAGVSK---------LAPEEIRSK----ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       159 Pg~v~t~~~~~~---------~~~~~~~~~----~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ||+++|++....         ...++....    .....+++++.+|+|+|++++||+++.+++++|+++.+|||+..
T Consensus       187 PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~  264 (267)
T 3t4x_A          187 PGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDGGLVR  264 (267)
T ss_dssp             ECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTCSC
T ss_pred             CCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHHHHHHHHHHcCccccCccCCeEEECCCccc
Confidence            999999853211         111222221    22234678999999999999999999999999999999999754

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=3.7e-36  Score=255.70  Aligned_cols=236  Identities=23%  Similarity=0.275  Sum_probs=198.8

Q ss_pred             HHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHH
Q 025124            5 KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF   84 (257)
Q Consensus         5 ~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~   84 (257)
                      .++++++.+++.+.+.++.++.+|++|+++++++++++.+++|+||+||||||+....++.+.+.++|++++++|+.+++
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~  150 (322)
T 3qlj_A           71 GSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHF  150 (322)
T ss_dssp             TSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHH
Confidence            67889999999988889999999999999999999999999999999999999888888899999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccC
Q 025124           85 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD  164 (257)
Q Consensus        85 ~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t  164 (257)
                      .++++++++|.+.....  ....|+||++||..+..+.++...|++||+|+++|+++++.|++ ++||+||+|+|| +.|
T Consensus       151 ~~~~~~~~~~~~~~~~~--~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~-~~gI~vn~v~PG-~~t  226 (322)
T 3qlj_A          151 ATMRHAAAYWRGLSKAG--KAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATLTLVGAAEMG-RYGVTVNAIAPS-ART  226 (322)
T ss_dssp             HHHHHHHHHHHHHHHTT--CCCCEEEEEECCHHHHHCBTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC-TTS
T ss_pred             HHHHHHHHHHHHccccC--CCCCcEEEEEcCHHHccCCCCCccHHHHHHHHHHHHHHHHHHhc-ccCcEEEEecCC-CCC
Confidence            99999999998642100  01137999999999999999999999999999999999999999 899999999999 888


Q ss_pred             CCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCC------------CCCCcHH
Q 025124          165 TAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSN------------PRDLPKE  232 (257)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~------------~~~~~~~  232 (257)
                      ++......... .    ......++.+|+|+|++++||+++.+.+++|+++.+|||.....            ..|..+.
T Consensus       227 ~~~~~~~~~~~-~----~~~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~e  301 (322)
T 3qlj_A          227 RMTETVFAEMM-A----TQDQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAE  301 (322)
T ss_dssp             CCSCCSCCC-------------CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGG
T ss_pred             ccchhhhhhhh-h----ccccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHH
Confidence            87654432211 1    11122345799999999999999999999999999999987643            4556688


Q ss_pred             HHHHHHHHHhccCCCCC
Q 025124          233 AVNQLSRAVERKSRDSP  249 (257)
Q Consensus       233 ~~~~~~~~~~~~~~~~~  249 (257)
                      +...+.+...++..+.+
T Consensus       302 l~~~~~~~~~~~~~~~~  318 (322)
T 3qlj_A          302 LGPVVADLLGKARPPVP  318 (322)
T ss_dssp             HHHHHHHHHHHSCCCCC
T ss_pred             HHHHHHHHhhccCCCCC
Confidence            88888888887655543

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=5.2e-36  Score=247.35  Aligned_cols=211  Identities=21%  Similarity=0.251  Sum_probs=182.1

Q ss_pred             CCcHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      +|++++++++.+++.+.  +.++.++.+|++|+++++++++++.+++| +|+||||||+....++.+.+.++|++.+++|
T Consensus        38 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N  116 (260)
T 2z1n_A           38 SRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG-ADILVYSTGGPRPGRFMELGVEDWDESYRLL  116 (260)
T ss_dssp             ESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC-CSEEEECCCCCCCBCGGGCCHHHHHHHHHHT
T ss_pred             eCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC-CCEEEECCCCCCCCCcccCCHHHHHHHHHHH
Confidence            68888898888888754  34799999999999999999999999999 9999999998777788889999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.+++.++++++|.|.+++        .|+||++||..+..+.++...|+++|+++++|+++++.|+. ++||++++|+|
T Consensus       117 ~~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~P  187 (260)
T 2z1n_A          117 ARSAVWVGRRAAEQMVEKG--------WGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELA-PHGVTVNAVLP  187 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTTBHHHHHHTHHHHHHHHHHHHHHG-GGTEEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHhcC--------CcEEEEECchhhcCCCCCCchhHHHHHHHHHHHHHHHHHHh-hhCeEEEEEEE
Confidence            9999999999999998876        69999999999999999999999999999999999999999 89999999999


Q ss_pred             CcccCCCCCCCC--------ChHHH-HHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          160 GPIKDTAGVSKL--------APEEI-RSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       160 g~v~t~~~~~~~--------~~~~~-~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      |++.|++.....        ..... ...+....|.+++.+|+|+|+.+++|+++.+++++|+.+.+|||+.
T Consensus       188 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~~tG~~i~vdGG~~  259 (260)
T 2z1n_A          188 SLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLASEKASFITGAVIPVDGGAH  259 (260)
T ss_dssp             CHHHHCCCC-----------------------CCTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             CCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCccccCCCCCEEEeCCCcc
Confidence            999999754110        01111 2233344677889999999999999999988999999999999965

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=3e-36  Score=251.01  Aligned_cols=213  Identities=26%  Similarity=0.321  Sum_probs=188.3

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|++++++++.+++.+.+.++.++.+|++|+++++++++++.++++++|+||||||+....++.+.+.++|+..+++|+
T Consensus        52 ~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~  131 (277)
T 2rhc_B           52 CARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNL  131 (277)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHT
T ss_pred             EeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHh
Confidence            36888999999999988788899999999999999999999999999999999999987777888899999999999999


Q ss_pred             HHHHHHHHHHHHH--HHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124           81 VGTFIMCHEALKY--LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus        81 ~~~~~l~~~~~~~--~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      .++++++++++|.  |.+++        .|+||++||..+..+.++...|+++|+++++|+++++.|+. ++||++++|+
T Consensus       132 ~g~~~l~~~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~  202 (277)
T 2rhc_B          132 TGVFRVTKQVLKAGGMLERG--------TGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELA-RTGITVNAVC  202 (277)
T ss_dssp             HHHHHHHHHHHTTTCHHHHT--------EEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHT-TTEEEEEEEE
T ss_pred             HHHHHHHHHHhChhhHhhcC--------CeEEEEECccccccCCCCCccHHHHHHHHHHHHHHHHHHHH-HhCcEEEEEe
Confidence            9999999999999  98765        68999999999999989999999999999999999999999 8999999999


Q ss_pred             cCcccCCCCCCCCC---h------HHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          159 PGPIKDTAGVSKLA---P------EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       159 Pg~v~t~~~~~~~~---~------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      ||+++|++......   .      .+....+....+.+++.+|+|+|+++++|+++.+.+++|+.+.+|||..
T Consensus       203 PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~~  275 (277)
T 2rhc_B          203 PGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGLG  275 (277)
T ss_dssp             ECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             cCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCcc
Confidence            99999986422100   0      1222334455678889999999999999999888999999999999964

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=6.4e-36  Score=249.44  Aligned_cols=209  Identities=20%  Similarity=0.189  Sum_probs=185.7

Q ss_pred             HHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCC-CCHHHHHHHHHHHhHH
Q 025124            8 LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAED-LSPNGFRTVIEIDSVG   82 (257)
Q Consensus         8 l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~----~~~~~-~~~~~~~~~~~~n~~~   82 (257)
                      +++..+++.+...++.++.||++|.++++++++++.+++++||+||||||+...    .++.+ .+.++|+..+++|+.+
T Consensus        63 ~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~  142 (280)
T 3nrc_A           63 FKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYS  142 (280)
T ss_dssp             CHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHH
T ss_pred             HHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHH
Confidence            344555666555678999999999999999999999999999999999997654    45555 8999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcc
Q 025124           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (257)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v  162 (257)
                      ++.++++++|.|.++         .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+|++|+||++
T Consensus       143 ~~~l~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~Y~asKaal~~~~~~la~e~~-~~gi~v~~v~PG~v  212 (280)
T 3nrc_A          143 FAALAKEGRSMMKNR---------NASMVALTYIGAEKAMPSYNTMGVAKASLEATVRYTALALG-EDGIKVNAVSAGPI  212 (280)
T ss_dssp             HHHHHHHHHHHHTTT---------TCEEEEEECGGGTSCCTTTHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCC
T ss_pred             HHHHHHHHHHHhhcC---------CCeEEEEeccccccCCCCchhhHHHHHHHHHHHHHHHHHHH-HcCcEEEEEeeccc
Confidence            999999999999865         58999999999999999999999999999999999999999 89999999999999


Q ss_pred             cCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCC
Q 025124          163 KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNP  226 (257)
Q Consensus       163 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~  226 (257)
                      +|++..................+.+++.+|+|+|+.+++|+++.+.+++|+.+.+|||..+...
T Consensus       213 ~T~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG~~~~~~  276 (280)
T 3nrc_A          213 KTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSDMATGITGEVVHVDAGYHCVSM  276 (280)
T ss_dssp             CCSGGGGCTTHHHHHHHHHHHSTTCSCCCHHHHHHHHHHTTSGGGTTCCSCEEEESTTGGGCCC
T ss_pred             cchhhhcCcchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCCcCCcEEEECCCccccCC
Confidence            9998765554456667777788889999999999999999999999999999999999887653

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=3.4e-36  Score=247.55  Aligned_cols=211  Identities=28%  Similarity=0.351  Sum_probs=192.4

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC------CccEEEeCCCCCCCCCCCCCCHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG------KLDILVNAAAGNFLVPAEDLSPNGFRTV   75 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g------~id~li~~ag~~~~~~~~~~~~~~~~~~   75 (257)
                      +|+.++++++.+++.+.+.++.++.+|+++.++++.+++++.++++      ++|++|||||+....++.+.+.++|+++
T Consensus        39 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~  118 (255)
T 3icc_A           39 GNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRM  118 (255)
T ss_dssp             SSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHH
T ss_pred             CCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHH
Confidence            5778889999999998888899999999999999999999988875      4999999999887788889999999999


Q ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEE
Q 025124           76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN  155 (257)
Q Consensus        76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~  155 (257)
                      +++|+.+++.++++++|+|.+          .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+|+
T Consensus       119 ~~~N~~g~~~l~~~~~~~~~~----------~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~  187 (255)
T 3icc_A          119 VSVNAKAPFFIIQQALSRLRD----------NSRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLG-ARGITVN  187 (255)
T ss_dssp             HHHHTHHHHHHHHHHTTTEEE----------EEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTCEEE
T ss_pred             HhhhchHHHHHHHHHHHhhCC----------CCEEEEeCChhhccCCCCcchhHHhHHHHHHHHHHHHHHHH-hcCeEEE
Confidence            999999999999999999843          58999999999999999999999999999999999999999 8899999


Q ss_pred             EEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          156 GIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       156 ~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +|+||+++|++..................+.+++.+|+|+|+++++|+++.+.+++|+.+.+|||..+
T Consensus       188 ~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~~l  255 (255)
T 3icc_A          188 AILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGSCL  255 (255)
T ss_dssp             EEEECCBCCSSSTTTTTSHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSTTC
T ss_pred             EEEEeeecccchhhhcccHHHHHhhhccCCcCCCCCHHHHHHHHHHHhCcccCCccCCEEEecCCeeC
Confidence            99999999998766655555566666777888999999999999999999999999999999999764

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=2.2e-36  Score=253.62  Aligned_cols=211  Identities=28%  Similarity=0.411  Sum_probs=185.9

Q ss_pred             CCcHH-HHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHHH
Q 025124            2 GRRKT-VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         2 ~r~~~-~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n   79 (257)
                      +|+.+ ..+.+.+.+.+.+.++.++.+|++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|
T Consensus        78 ~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN  157 (291)
T 3ijr_A           78 YLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRIN  157 (291)
T ss_dssp             ESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHH
T ss_pred             eCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHH
Confidence            45554 455666677777889999999999999999999999999999999999999764 4678889999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.|+++++++++|+|++          .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+|
T Consensus       158 ~~g~~~l~~~~~~~~~~----------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~P  226 (291)
T 3ijr_A          158 IFSYFHVTKAALSHLKQ----------GDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLV-QKGIRVNGVAP  226 (291)
T ss_dssp             THHHHHHHHHHHTTCCT----------TCEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHhh----------CCEEEEEechHhcCCCCCChhHHHHHHHHHHHHHHHHHHHh-hcCEEEEEEee
Confidence            99999999999999854          57899999999999999999999999999999999999999 88999999999


Q ss_pred             CcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       160 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      |+++|++...... .+....+....+.+++.+|+|+|++++||+++.+.+++|+.+.+|||.++.
T Consensus       227 G~v~T~~~~~~~~-~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  290 (291)
T 3ijr_A          227 GPIWTPLIPSSFD-EKKVSQFGSNVPMQRPGQPYELAPAYVYLASSDSSYVTGQMIHVNGGVIVN  290 (291)
T ss_dssp             CSBCSTHHHHHSC-HHHHHHTTTTSTTSSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESSSCCCC
T ss_pred             CCCcCCcccccCC-HHHHHHHHccCCCCCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCCcccC
Confidence            9999987533222 334455666778899999999999999999999999999999999998764

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=1.6e-35  Score=246.38  Aligned_cols=215  Identities=24%  Similarity=0.280  Sum_probs=182.0

Q ss_pred             CC-cHHHHHHHHHHHHhc-CCCeEEEEccCCCH----HHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCH------
Q 025124            2 GR-RKTVLRSAVAALHSL-GIPAIGLEGDVRKR----EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSP------   69 (257)
Q Consensus         2 ~r-~~~~l~~~~~~l~~~-~~~~~~~~~Dls~~----~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~------   69 (257)
                      +| +.++++++.+++.+. +.++.++.+|++|.    ++++++++++.+++|++|+||||||+....++.+.+.      
T Consensus        42 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~  121 (276)
T 1mxh_A           42 YRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAAD  121 (276)
T ss_dssp             ESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC---------
T ss_pred             eCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCccccCccccccc
Confidence            57 888899999888876 77899999999999    9999999999999999999999999877778888888      


Q ss_pred             -----HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHH
Q 025124           70 -----NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL  144 (257)
Q Consensus        70 -----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~  144 (257)
                           ++|+.++++|+.++++++++++|.|. ++.  ......|+||++||..+..+.++...|+++|+++++|+++++.
T Consensus       122 ~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~--~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~  198 (276)
T 1mxh_A          122 AKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGG--AWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAAL  198 (276)
T ss_dssp             --CHHHHHHHHHHHHTHHHHHHHHHHHHTC----------CCCEEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCC--CCCCCCcEEEEECchhhcCCCCCCeehHHHHHHHHHHHHHHHH
Confidence                 99999999999999999999999987 330  0000128999999999999999999999999999999999999


Q ss_pred             HhcCCCCeEEEEEecCcccCCCCCCCCChHHHHHHhhhhccCCC-CCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          145 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-FGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       145 e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      |+. ++||+||+|+||++.|+ .  .. .......+....+.++ +.+|+|+|+.+++|+++.+.+++|+.+.+|||+.+
T Consensus       199 e~~-~~gi~v~~v~PG~v~t~-~--~~-~~~~~~~~~~~~p~~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~  273 (276)
T 1mxh_A          199 ELA-PRHIRVNAVAPGLSLLP-P--AM-PQETQEEYRRKVPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLIL  273 (276)
T ss_dssp             HHG-GGTEEEEEEEESSBSCC-S--SS-CHHHHHHHHTTCTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHh-hcCeEEEEEecCcccCC-c--cC-CHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCchhc
Confidence            999 89999999999999998 2  22 2333344445567778 89999999999999998889999999999999765


Q ss_pred             C
Q 025124          224 S  224 (257)
Q Consensus       224 ~  224 (257)
                      .
T Consensus       274 ~  274 (276)
T 1mxh_A          274 A  274 (276)
T ss_dssp             C
T ss_pred             c
Confidence            4

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5e-36  Score=250.82  Aligned_cols=209  Identities=21%  Similarity=0.190  Sum_probs=183.6

Q ss_pred             CCcHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEI   78 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~   78 (257)
                      +|+.++++++.+++.+.  +.++.++.||++|+++++++++++.+++|+||+||||||+.. ..++.+.+.++|++++++
T Consensus        67 ~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~v  146 (287)
T 3rku_A           67 ARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDT  146 (287)
T ss_dssp             ESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHH
T ss_pred             ECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHH
Confidence            68999999999999875  567999999999999999999999999999999999999765 578889999999999999


Q ss_pred             HhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      |+.|+++++++++|.|++++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+
T Consensus       147 N~~g~~~l~~~~~~~m~~~~--------~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gIrvn~v~  217 (287)
T 3rku_A          147 NVTALINITQAVLPIFQAKN--------SGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKELI-NTKIRVILIA  217 (287)
T ss_dssp             HTHHHHHHHHHHHHHHHHHT--------CCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTT-TSSCEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHhcC--------CCeEEEECChhhcCCCCCCchHHHHHHHHHHHHHHHHHHhh-hcCCEEEEEe
Confidence            99999999999999999876        79999999999999999999999999999999999999999 8999999999


Q ss_pred             cCcccCCCCCCCC--ChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          159 PGPIKDTAGVSKL--APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       159 Pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ||+++|++.....  ...........    ....+|+|+|+.++||+++.+.+++|+.+.+++|...
T Consensus       218 PG~v~T~~~~~~~~~~~~~~~~~~~~----~~p~~pedvA~~v~~l~s~~~~~i~g~~i~v~~g~~~  280 (287)
T 3rku_A          218 PGLVETEFSLVRYRGNEEQAKNVYKD----TTPLMADDVADLIVYATSRKQNTVIADTLIFPTNQAS  280 (287)
T ss_dssp             ESCEESSHHHHHTTTCHHHHHHHHTT----SCCEEHHHHHHHHHHHHTSCTTEEEEEEEEEETTEEE
T ss_pred             CCcCcCccccccccCcHHHHHHhhcc----cCCCCHHHHHHHHHHHhCCCCCeEecceEEeeCCCCC
Confidence            9999998742221  11122222222    2345899999999999999999999999999999754

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=1.3e-35  Score=247.78  Aligned_cols=210  Identities=22%  Similarity=0.268  Sum_probs=178.7

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCC----CCCCHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPA----EDLSPNGFRTVI   76 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~-~~~----~~~~~~~~~~~~   76 (257)
                      +|+.++++++.+++   +.++.++.+|++|+++++++++++.+++|++|+||||||+... ..+    .+.+.++|++++
T Consensus        36 ~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~  112 (281)
T 3zv4_A           36 DKSAERLRELEVAH---GGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIF  112 (281)
T ss_dssp             ESCHHHHHHHHHHT---BTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHH
T ss_pred             eCCHHHHHHHHHHc---CCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHH
Confidence            67888877765543   6789999999999999999999999999999999999997543 222    345567899999


Q ss_pred             HHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEE
Q 025124           77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (257)
Q Consensus        77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~  156 (257)
                      ++|+.+++.++++++|+|.++         +|+||++||..+..+.++...|++||+|+++|+++++.|+. ++ |+||+
T Consensus       113 ~vN~~g~~~~~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~-Irvn~  181 (281)
T 3zv4_A          113 HVNVKGYIHAVKACLPALVSS---------RGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELA-PH-VRVNG  181 (281)
T ss_dssp             HHHTHHHHHHHHHHHHHHHHH---------TCEEEEECCGGGTSSSSSCHHHHHHHHHHHHHHHHHHHHHT-TT-SEEEE
T ss_pred             hhhhHHHHHHHHHHHHHHHhc---------CCeEEEEecchhccCCCCCchhHHHHHHHHHHHHHHHHHhc-CC-CEEEE
Confidence            999999999999999999875         58999999999999999999999999999999999999998 76 99999


Q ss_pred             EecCcccCCCCCCCCC--------hHHHHHHhhhhccCCCCCCHHhHHHHHHHhcc-CCCCcccCcEEEecCCcccCC
Q 025124          157 IAPGPIKDTAGVSKLA--------PEEIRSKATDYMAAYKFGEKWDIAMAALYLAS-DAGKYVNGNTLIVDGGNWLSN  225 (257)
Q Consensus       157 v~Pg~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~G~~~~~dgg~~~~~  225 (257)
                      |+||+++|++......        .....+......|++++.+|+|+|+.++||++ +.+.+++|+++.+|||+++..
T Consensus       182 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~~~~~  259 (281)
T 3zv4_A          182 VAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVFFATRGDSLPATGALLNYDGGMGVRG  259 (281)
T ss_dssp             EEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSGGGCC
T ss_pred             EECCcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHHHHHHHHHHhhcccccccccCcEEEECCCCcccc
Confidence            9999999997543211        01133456677889999999999999999999 788889999999999987754

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=4.4e-35  Score=249.52  Aligned_cols=215  Identities=21%  Similarity=0.299  Sum_probs=186.1

Q ss_pred             CcHHHHHHHHHHHH-hcCCCeEEEEccCCCHH-----------------HHHHHHHHHHHHhCCccEEEeCCCCCCCCCC
Q 025124            3 RRKTVLRSAVAALH-SLGIPAIGLEGDVRKRE-----------------DAVRVVESTINHFGKLDILVNAAAGNFLVPA   64 (257)
Q Consensus         3 r~~~~l~~~~~~l~-~~~~~~~~~~~Dls~~~-----------------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~   64 (257)
                      |+.++++++.+++. +.+.++.++.+|++|.+                 +++++++++.+++|++|+||||||+....++
T Consensus        79 r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~  158 (328)
T 2qhx_A           79 RSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPL  158 (328)
T ss_dssp             SCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCS
T ss_pred             CCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCh
Confidence            88999999998887 55778999999999999                 9999999999999999999999998777788


Q ss_pred             CCCC--------------HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHH
Q 025124           65 EDLS--------------PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA  130 (257)
Q Consensus        65 ~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~  130 (257)
                      .+.+              .++|+.++++|+.+++.++++++|.|.+++..  .....|+||++||..+..+.++...|++
T Consensus       159 ~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~--~~~~~g~IV~isS~~~~~~~~~~~~Y~a  236 (328)
T 2qhx_A          159 LRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAK--HRGTNYSIINMVDAMTNQPLLGYTIYTM  236 (328)
T ss_dssp             CC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSCGG--GSCSCEEEEEECCTTTTSCCTTCHHHHH
T ss_pred             hhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--CCCCCcEEEEECchhhccCCCCcHHHHH
Confidence            8888              99999999999999999999999999875300  0000379999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHHHHhhhhccCC-CCCCHHhHHHHHHHhccCCCCc
Q 025124          131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-KFGEKWDIAMAALYLASDAGKY  209 (257)
Q Consensus       131 sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~~~~~l~~~~~~~  209 (257)
                      +|+++++|+++++.|+. ++||+||+|+||+++|++  ...  ......+....|++ ++.+|+|+|+++++|+++.+.+
T Consensus       237 sKaal~~l~~~la~el~-~~gIrvn~v~PG~v~T~~--~~~--~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~  311 (328)
T 2qhx_A          237 AKGALEGLTRSAALELA-PLQIRVNGVGPGLSVLVD--DMP--PAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKY  311 (328)
T ss_dssp             HHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBSCCC--CSC--HHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHh-hcCcEEEEEecCcccCCc--ccc--HHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCccccC
Confidence            99999999999999999 899999999999999997  222  23334444556777 8999999999999999988899


Q ss_pred             ccCcEEEecCCcccC
Q 025124          210 VNGNTLIVDGGNWLS  224 (257)
Q Consensus       210 ~~G~~~~~dgg~~~~  224 (257)
                      ++|+++.+|||+.+.
T Consensus       312 itG~~i~vdGG~~~~  326 (328)
T 2qhx_A          312 ITGTCVKVDGGYSLT  326 (328)
T ss_dssp             CCSCEEEESTTGGGC
T ss_pred             ccCcEEEECCCcccC
Confidence            999999999998664

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=1.7e-35  Score=244.76  Aligned_cols=213  Identities=23%  Similarity=0.292  Sum_probs=179.2

Q ss_pred             CcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCC--CCCCCCCCCCCHHHHHHHHHHHh
Q 025124            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--GNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         3 r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag--~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++.+.++.+.+.+.+.+.++.++.+|++|+++++++++++.++++++|+||||||  .....++.+.+.++|++.+++|+
T Consensus        40 ~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~  119 (264)
T 3i4f_A           40 SDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNL  119 (264)
T ss_dssp             SCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHT
T ss_pred             CChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhcc
Confidence            3455566666666666778999999999999999999999999999999999999  55557888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccc-cc-ccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT-LH-YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~-~~-~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      .+++.++++++|.|++++        .|+||++||. .+ ..+.++...|+++|+|+++|+++++.|+. ++||+|++|+
T Consensus       120 ~g~~~l~~~~~~~~~~~~--------~g~iv~iss~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~  190 (264)
T 3i4f_A          120 TAVFHLLKLVVPVMRKQN--------FGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEA-EYGITANMVC  190 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CEEEEEECCTTGGGCCCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHhcC--------CCeEEEEeechhcccCCCCCCchhHHHHHHHHHHHHHHHHHhh-hcCcEEEEEc
Confidence            999999999999999876        7999999988 43 45667789999999999999999999999 8999999999


Q ss_pred             cCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCC
Q 025124          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNP  226 (257)
Q Consensus       159 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~  226 (257)
                      ||++.|++....  ............+.+++.+|+|+|+.+++|+++.+.+++|+.+.+|||+....+
T Consensus       191 PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdGG~~~~~~  256 (264)
T 3i4f_A          191 PGDIIGEMKEAT--IQEARQLKEHNTPIGRSGTGEDIARTISFLCEDDSDMITGTIIEVTGAVDVIHR  256 (264)
T ss_dssp             ECCCCGGGGSCC--HHHHHHC--------CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESCSCCCCC-
T ss_pred             cCCccCccchhc--cHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcccCCCCCcEEEEcCceeeccC
Confidence            999999876443  244445555667888999999999999999999999999999999999877643

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=3.8e-36  Score=249.28  Aligned_cols=212  Identities=21%  Similarity=0.155  Sum_probs=179.2

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCC-CCHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAED-LSPNGFRTVI   76 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~----~~~~~-~~~~~~~~~~   76 (257)
                      +|+.. ..+..+++.+...++.++.||++|+++++++++++.+++++||++|||||+...    .++.+ .+.++|+..+
T Consensus        47 ~r~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~  125 (271)
T 3ek2_A           47 YVGDR-FKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAH  125 (271)
T ss_dssp             ESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHH
T ss_pred             ecchh-hHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHH
Confidence            35532 233344444444568899999999999999999999999999999999998764    56666 8999999999


Q ss_pred             HHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEE
Q 025124           77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (257)
Q Consensus        77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~  156 (257)
                      ++|+.+++.++++++|.|++          .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+|++
T Consensus       126 ~~n~~~~~~l~~~~~~~~~~----------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~  194 (271)
T 3ek2_A          126 DISAYSFPALAKAALPMLSD----------DASLLTLSYLGAERAIPNYNTMGLAKAALEASVRYLAVSLG-AKGVRVNA  194 (271)
T ss_dssp             HHHTTHHHHHHHHHGGGEEE----------EEEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHHHHHHHHH-TTTCEEEE
T ss_pred             hhhHHHHHHHHHHHHHHhcc----------CceEEEEeccccccCCCCccchhHHHHHHHHHHHHHHHHHH-hcCcEEEE
Confidence            99999999999999999874          58899999999999999999999999999999999999999 89999999


Q ss_pred             EecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCC
Q 025124          157 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSN  225 (257)
Q Consensus       157 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~  225 (257)
                      |+||+++|++.............+....+.+++.+|+|+|+.+++|+++.+.+++|+++.+|||..+..
T Consensus       195 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~  263 (271)
T 3ek2_A          195 ISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVV  263 (271)
T ss_dssp             EEECCC-----CCCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBC
T ss_pred             EecCcccchhhhcccchHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeeeeh
Confidence            999999998765443334556667777888999999999999999999989999999999999987764

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-35  Score=249.93  Aligned_cols=214  Identities=23%  Similarity=0.322  Sum_probs=186.6

Q ss_pred             CCCcHHHHHHHHHHHHhcCC---CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCC--CCCCCHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGI---PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP--AEDLSPNGFRTV   75 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~---~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~--~~~~~~~~~~~~   75 (257)
                      ++|+.++++++.+++.+.+.   ++.++.+|++|+++++++++++.+++|++|+||||||+....+  +.+.+.++|+..
T Consensus        56 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~  135 (297)
T 1xhl_A           56 TGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKT  135 (297)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHH
T ss_pred             EeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHH
Confidence            36889999999999887766   7999999999999999999999999999999999999876666  888999999999


Q ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccccc-ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEE
Q 025124           76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-WYQIHVSAAKAAVDSITRSLALEWGTDYAIRV  154 (257)
Q Consensus        76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~-~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v  154 (257)
                      +++|+.+++.++++++|.|.++         +|+||++||..+..+. ++...|+++|+++++|+++++.|+. ++||+|
T Consensus       136 ~~vN~~g~~~l~~~~~~~~~~~---------~g~IV~isS~~~~~~~~~~~~~Y~asKaa~~~l~~~la~el~-~~gI~v  205 (297)
T 1xhl_A          136 FKLNFQAVIEMTQKTKEHLIKT---------KGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLI-QHGVRV  205 (297)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHT---------TCEEEEECCGGGSSSCCTTSHHHHHHHHHHHHHHHHHHHHHG-GGTCEE
T ss_pred             HhHhhHHHHHHHHHHHHHHHhc---------CCEEEEEcCchhccCCCCCcchHHHHHHHHHHHHHHHHHHhc-ccCeEE
Confidence            9999999999999999999875         4889999999998887 8889999999999999999999999 899999


Q ss_pred             EEEecCcccCCCCCCCC-Ch------HHHHHHhhhhccCCCCCCHHhHHHHHHHhccCC-CCcccCcEEEecCCcccC
Q 025124          155 NGIAPGPIKDTAGVSKL-AP------EEIRSKATDYMAAYKFGEKWDIAMAALYLASDA-GKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       155 ~~v~Pg~v~t~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~-~~~~~G~~~~~dgg~~~~  224 (257)
                      |+|+||+++|++..... ..      .+.........|.+++.+|+|+|+.+++|+++. +.+++|+.+.+|||..+.
T Consensus       206 ~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~  283 (297)
T 1xhl_A          206 NSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLV  283 (297)
T ss_dssp             EEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             EEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCcccc
Confidence            99999999998753321 11      112222334457788999999999999999987 889999999999997664

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=6.1e-36  Score=245.88  Aligned_cols=211  Identities=27%  Similarity=0.419  Sum_probs=153.5

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC---CCCCCCCCCHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN---FLVPAEDLSPNGFRTVIE   77 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~---~~~~~~~~~~~~~~~~~~   77 (257)
                      ++|+.++++++.+++.+.+.++.++.+|++|+++++++++++.++++++|++|||||+.   ...++.+.+.++|++.++
T Consensus        39 ~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~  118 (253)
T 3qiv_A           39 ADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMS  118 (253)
T ss_dssp             EESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHH
T ss_pred             EcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHh
Confidence            36899999999999998888999999999999999999999999999999999999973   446778899999999999


Q ss_pred             HHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEE
Q 025124           78 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (257)
Q Consensus        78 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v  157 (257)
                      +|+.+++.++++++|.|.+++        .|+||++||..+.   ++...|+++|+|+++|+++++.|+. ++||++++|
T Consensus       119 ~N~~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~---~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v  186 (253)
T 3qiv_A          119 VNLDGALWCTRAVYKKMTKRG--------GGAIVNQSSTAAW---LYSNYYGLAKVGINGLTQQLSRELG-GRNIRINAI  186 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHT--------CEEEEEECC--------------CCHHHHHHHHHHHHHHTT-TTTEEEEEE
T ss_pred             hhhHHHHHHHHHHHHHHHhcC--------CCEEEEECCcccc---CCCchhHHHHHHHHHHHHHHHHHHh-hcCeEEEEE
Confidence            999999999999999999876        7999999999876   4567799999999999999999999 899999999


Q ss_pred             ecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          158 APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       158 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      +||+++|++.... ...+.........+..++.+|+|+++++++|+++.+.+++|+.+.+|||..+.
T Consensus       187 ~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~~~~  252 (253)
T 3qiv_A          187 APGPIDTEANRTT-TPKEMVDDIVKGLPLSRMGTPDDLVGMCLFLLSDEASWITGQIFNVDGGQIIR  252 (253)
T ss_dssp             EC--------------------------------CCHHHHHHHHHHSGGGTTCCSCEEEC-------
T ss_pred             EecCCcccchhhc-CcHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCCeecC
Confidence            9999999875433 22344455566677888999999999999999998999999999999997654

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-35  Score=247.60  Aligned_cols=215  Identities=23%  Similarity=0.335  Sum_probs=186.4

Q ss_pred             CCCcHHHHHHHHHHHHhcCC---CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCC----CCCCCHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGI---PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP----AEDLSPNGFR   73 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~---~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~----~~~~~~~~~~   73 (257)
                      ++|+.++++++.+++.+.+.   ++.++.+|++|+++++++++++.+++|++|+||||||+....+    +.+.+.++|+
T Consensus        36 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~  115 (280)
T 1xkq_A           36 TGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYH  115 (280)
T ss_dssp             EESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHH
T ss_pred             EeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHH
Confidence            36889999999888887665   7999999999999999999999999999999999999876665    7788999999


Q ss_pred             HHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccccc-ccchhhHHHHHHHHHHHHHHHHHhcCCCCe
Q 025124           74 TVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-WYQIHVSAAKAAVDSITRSLALEWGTDYAI  152 (257)
Q Consensus        74 ~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~-~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi  152 (257)
                      ..+++|+.+++.++++++|.|.++         +|+||++||..+..+. ++...|+++|+++++|+++++.|+. ++||
T Consensus       116 ~~~~~N~~g~~~~~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi  185 (280)
T 1xkq_A          116 KTLKLNLQAVIEMTKKVKPHLVAS---------KGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLA-KFGI  185 (280)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHHHH---------TCEEEEECCGGGSSSCCCSSHHHHHHHHHHHHHHHHHHHHHH-TTTC
T ss_pred             HHHHHhhHHHHHHHHHHHHHhhcC---------CCcEEEecCccccCCCCCcccHHHHHHHHHHHHHHHHHHHhc-cCCe
Confidence            999999999999999999999875         4889999999998887 8889999999999999999999999 8999


Q ss_pred             EEEEEecCcccCCCCCCCC-Ch------HHHHHHhhhhccCCCCCCHHhHHHHHHHhccCC-CCcccCcEEEecCCcccC
Q 025124          153 RVNGIAPGPIKDTAGVSKL-AP------EEIRSKATDYMAAYKFGEKWDIAMAALYLASDA-GKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       153 ~v~~v~Pg~v~t~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~-~~~~~G~~~~~dgg~~~~  224 (257)
                      ++|+|+||+++|++..... ..      .+.........|.+++.+|+|+|+.+++|+++. +.+++|+.+.+|||..+.
T Consensus       186 ~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~~~  265 (280)
T 1xkq_A          186 RVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSLV  265 (280)
T ss_dssp             EEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             EEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCCcccc
Confidence            9999999999998753321 11      112223333457788999999999999999987 889999999999998765


Q ss_pred             C
Q 025124          225 N  225 (257)
Q Consensus       225 ~  225 (257)
                      .
T Consensus       266 ~  266 (280)
T 1xkq_A          266 M  266 (280)
T ss_dssp             B
T ss_pred             c
Confidence            3

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=1.3e-35  Score=244.28  Aligned_cols=211  Identities=23%  Similarity=0.284  Sum_probs=180.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.+  +++.+++.+.+.++.++.+|++|+++++++++++.+++|++|+||||||+....++.+.+.++|++.+++|+.
T Consensus        35 ~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~  112 (255)
T 2q2v_A           35 GFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLS  112 (255)
T ss_dssp             CSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTH
T ss_pred             eCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            45554  4556667666778999999999999999999999999999999999999877777888999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.++++++|.|++++        .|+||++||..+..+.++...|+++|+++++|+++++.|+. ++||++++|+||+
T Consensus       113 ~~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~  183 (255)
T 2q2v_A          113 AVFHGTRLALPGMRARN--------WGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETA-TSNVTCNAICPGW  183 (255)
T ss_dssp             HHHHHHHHHHHHHHHTT--------CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHTT-TSSEEEEEEEESS
T ss_pred             HHHHHHHHHHHHHHHcC--------CcEEEEEcCchhccCCCCchhHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEeeCC
Confidence            99999999999999875        68999999999999989999999999999999999999999 8999999999999


Q ss_pred             ccCCCCCCCCC-hHHH---H----HHh-hhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          162 IKDTAGVSKLA-PEEI---R----SKA-TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       162 v~t~~~~~~~~-~~~~---~----~~~-~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +.|++...... ....   .    ..+ ....+.+++.+|+|+|+.+++|+++.+++++|+.+.+|||..+
T Consensus       184 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~~~  254 (255)
T 2q2v_A          184 VLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGGWLA  254 (255)
T ss_dssp             BCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             CcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECCCccC
Confidence            99986421100 0011   0    122 3445778899999999999999998888999999999999653

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=3.3e-35  Score=244.09  Aligned_cols=213  Identities=28%  Similarity=0.377  Sum_probs=179.2

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHHh
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~   80 (257)
                      +|+.+.++++.+++.+.+.++.++.+|++|.++++++++++.++++++|+||||||+... .++.+.+.++|++.+++|+
T Consensus        58 ~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~  137 (272)
T 4e3z_A           58 AANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNV  137 (272)
T ss_dssp             SSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             CCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhh
Confidence            688889999999998888899999999999999999999999999999999999998764 7788899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccc-cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~-~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      .++++++++++|.|.+...+.     .|+||++||..+..+.+ .+..|+++|+|+++|+++++.|+. ++||++++|+|
T Consensus       138 ~g~~~l~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~P  211 (272)
T 4e3z_A          138 TGSILCAAEAVRRMSRLYSGQ-----GGAIVNVSSMAAILGSATQYVDYAASKAAIDTFTIGLAREVA-AEGIRVNAVRP  211 (272)
T ss_dssp             HHHHHHHHHHHHHHCGGGTCC-----CEEEEEECCTHHHHCCTTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHhccCC-----CCEEEEEcchHhccCCCCCcchhHHHHHHHHHHHHHHHHHHH-HcCcEEEEEec
Confidence            999999999999998742111     68999999999988776 678899999999999999999999 88999999999


Q ss_pred             CcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       160 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                      |+++|++..... ..+.........+..++.+|+|+|+.+++|+++.+.+++|+.+.+|||+
T Consensus       212 G~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdgG~  272 (272)
T 4e3z_A          212 GIIETDLHASGG-LPDRAREMAPSVPMQRAGMPEEVADAILYLLSPSASYVTGSILNVSGGR  272 (272)
T ss_dssp             CSBC-------------------CCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCCcCCcccccC-ChHHHHHHhhcCCcCCCcCHHHHHHHHHHHhCCccccccCCEEeecCCC
Confidence            999998754422 2233344555667888999999999999999999999999999999994

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=1.3e-35  Score=246.28  Aligned_cols=195  Identities=28%  Similarity=0.403  Sum_probs=175.0

Q ss_pred             eEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCC
Q 025124           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ  101 (257)
Q Consensus        22 ~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  101 (257)
                      +..+.+|++|+++++++++++.+++|++|+||||||+....++.+.+.++|++++++|+.|++.++++++|+|.+++   
T Consensus        55 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~---  131 (269)
T 3vtz_A           55 SDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIG---  131 (269)
T ss_dssp             SEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---
T ss_pred             eeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC---
Confidence            45678999999999999999999999999999999988888889999999999999999999999999999999876   


Q ss_pred             CCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCC---------C
Q 025124          102 ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---------A  172 (257)
Q Consensus       102 ~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~---------~  172 (257)
                           .|+||++||..+..+.++...|+++|+|+++|+++++.|+. + ||+||+|+||+++|++.....         .
T Consensus       132 -----~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~  204 (269)
T 3vtz_A          132 -----HGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYA-P-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENA  204 (269)
T ss_dssp             -----CEEEEEECCGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHT-T-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTH
T ss_pred             -----CCEEEEECchhhccCCCCChhHHHHHHHHHHHHHHHHHHhc-C-CCEEEEEEECCCcCcchhhhhhccccccchh
Confidence                 79999999999999999999999999999999999999998 7 899999999999998642210         0


Q ss_pred             hHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCC
Q 025124          173 PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNP  226 (257)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~  226 (257)
                      .......+....+.+++.+|+|+|++++||+++.+.+++|+++.+|||+....+
T Consensus       205 ~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~~~  258 (269)
T 3vtz_A          205 VERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDRSSFITGACLTVDGGLLSKLP  258 (269)
T ss_dssp             HHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBCC
T ss_pred             hHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCccCCCcCcEEEECCCccccCC
Confidence            133445566678889999999999999999999999999999999999876544

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=3.4e-35  Score=243.23  Aligned_cols=206  Identities=24%  Similarity=0.368  Sum_probs=181.0

Q ss_pred             HHHHHHHHhcCCCeE-------------EEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHH
Q 025124            9 RSAVAALHSLGIPAI-------------GLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV   75 (257)
Q Consensus         9 ~~~~~~l~~~~~~~~-------------~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~   75 (257)
                      ..++..|.+.|.++.             .+.+|+++.++++.+++++.+++|++|+||||||+....++.+.+.++|++.
T Consensus        42 ~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~  121 (266)
T 3uxy_A           42 GAVVTALRAAGARVAVADRAVAGIAADLHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLS  121 (266)
T ss_dssp             HHHHHHHHHTTCEEEECSSCCTTSCCSEECCCCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHH
T ss_pred             HHHHHHHHHCCCEEEEEeCCHHHHHhhhccCcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHH
Confidence            345566666554432             3479999999999999999999999999999999988888899999999999


Q ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEE
Q 025124           76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN  155 (257)
Q Consensus        76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~  155 (257)
                      +++|+.|++.++++++|+|++++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||
T Consensus       122 ~~vN~~g~~~l~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn  192 (266)
T 3uxy_A          122 LGVNVEAPFRICRAAIPLMAAAG--------GGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGMDHA-PQGIRIN  192 (266)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCSBTTBCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEE
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcC--------CcEEEEECCHHhCCCCCCChHHHHHHHHHHHHHHHHHHHhh-hcCcEEE
Confidence            99999999999999999999876        79999999999999999999999999999999999999999 8899999


Q ss_pred             EEecCcccCCCCCC-----CCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          156 GIAPGPIKDTAGVS-----KLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       156 ~v~Pg~v~t~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +|+||+++|++...     ...............+.+++.+|+|+|+++++|+++.+++++|+.+.+|||..+
T Consensus       193 ~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 3uxy_A          193 AVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLASDAARYLCGSLVEVNGGKAV  265 (266)
T ss_dssp             EEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             EEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCEeC
Confidence            99999999986432     122233445566777889999999999999999999999999999999999765

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-35  Score=245.95  Aligned_cols=210  Identities=26%  Similarity=0.391  Sum_probs=178.3

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|++++++++.+++   +.++.++.+|++|+++++++++++.+++|++|++|||||+....++.+.+.++|++.+++|+.
T Consensus        37 ~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~  113 (263)
T 2a4k_A           37 DREERLLAEAVAAL---EAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLT  113 (263)
T ss_dssp             ESCHHHHHHHHHTC---CSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHH
T ss_pred             eCCHHHHHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            68888777766554   357899999999999999999999999999999999999887788889999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.++++++|.| ++         .|+||++||..+. +.++...|+++|+++++|+++++.|+. ++||++++|+||+
T Consensus       114 g~~~l~~~~~~~~-~~---------~g~iv~isS~~~~-~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~  181 (263)
T 2a4k_A          114 GSFLVARKAGEVL-EE---------GGSLVLTGSVAGL-GAFGLAHYAAGKLGVVGLARTLALELA-RKGVRVNVLLPGL  181 (263)
T ss_dssp             HHHHHHHHHHHHC-CT---------TCEEEEECCCTTC-CHHHHHHHHHCSSHHHHHHHHHHHHHT-TTTCEEEEEEECS
T ss_pred             HHHHHHHHHHHHH-hc---------CCEEEEEecchhc-CCCCcHHHHHHHHHHHHHHHHHHHHhh-hhCcEEEEEEeCc
Confidence            9999999999999 43         5899999999988 878889999999999999999999999 8999999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCC
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRD  228 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~  228 (257)
                      +.|++....  ............+.+++.+|+|+|+.+++|+++.+.+++|+.+.+|||..+..++.
T Consensus       182 v~t~~~~~~--~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdgG~~~~~~~~  246 (263)
T 2a4k_A          182 IQTPMTAGL--PPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALYVDGGRSIVGPPG  246 (263)
T ss_dssp             BCCGGGTTS--CHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTTC----
T ss_pred             CcCchhhhc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCccccCCCC
Confidence            999875432  23333444555677889999999999999999988999999999999987654433

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=7.6e-35  Score=243.86  Aligned_cols=216  Identities=25%  Similarity=0.318  Sum_probs=182.0

Q ss_pred             CCcH-HHHHHHHHHHH-hcCCCeEEEEccCCC----HHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCC-----CC----
Q 025124            2 GRRK-TVLRSAVAALH-SLGIPAIGLEGDVRK----REDAVRVVESTINHFGKLDILVNAAAGNFLVPA-----ED----   66 (257)
Q Consensus         2 ~r~~-~~l~~~~~~l~-~~~~~~~~~~~Dls~----~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~-----~~----   66 (257)
                      +|+. ++++++.+++. +.+.++.++.+|++|    .++++++++++.+.++++|+||||||+....++     .+    
T Consensus        54 ~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~  133 (288)
T 2x9g_A           54 YHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNG  133 (288)
T ss_dssp             ESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------
T ss_pred             eCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccc
Confidence            5777 88888888887 557789999999999    999999999999999999999999998766666     66    


Q ss_pred             -CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHH
Q 025124           67 -LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE  145 (257)
Q Consensus        67 -~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e  145 (257)
                       .+.++|+..+++|+.+++.++++++|.|.++...  .....|+||++||..+..+.++...|+++|+|+++|+++++.|
T Consensus       134 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~--~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e  211 (288)
T 2x9g_A          134 KTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPN--CTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALE  211 (288)
T ss_dssp             CCHHHHHHHHHHHHTHHHHHHHHHHHHHC----------CCCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCC--CCCCCeEEEEEecccccCCCCCCchHHHHHHHHHHHHHHHHHH
Confidence             8889999999999999999999999999864300  0011479999999999999999999999999999999999999


Q ss_pred             hcCCCCeEEEEEecCcccCCCCCCCCChHHHHHHhhhhccCCCC-CCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          146 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKF-GEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       146 ~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      +. ++||+||+|+||++.|++ .  .. ......+....+.+++ .+|+|+|+.+++|+++.+.+++|+.+.+|||..+.
T Consensus       212 ~~-~~gI~vn~v~PG~v~t~~-~--~~-~~~~~~~~~~~p~~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  286 (288)
T 2x9g_A          212 LA-PYGIRVNGVAPGVSLLPV-A--MG-EEEKDKWRRKVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLV  286 (288)
T ss_dssp             HG-GGTEEEEEEEESSCSCCT-T--SC-HHHHHHHHHTCTTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             hh-ccCeEEEEEEeccccCcc-c--cC-hHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCCEEEECcchhhh
Confidence            99 889999999999999997 3  22 2223344455677888 99999999999999998999999999999997654

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=6.2e-36  Score=250.17  Aligned_cols=206  Identities=31%  Similarity=0.337  Sum_probs=176.6

Q ss_pred             HHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHH
Q 025124            5 KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF   84 (257)
Q Consensus         5 ~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~   84 (257)
                      .++++++.+++...+.++.++.+|++|.++++++++++.+++|++|+||||||+....  .+.+.++|+..+++|+.+++
T Consensus        56 ~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~N~~g~~  133 (287)
T 3pxx_A           56 SRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLG--AHLPVQAFADAFDVDFVGVI  133 (287)
T ss_dssp             HHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC--TTCCTHHHHHHHHHHTHHHH
T ss_pred             hHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCccc--CcCCHHHHHHHhhhhhhhhH
Confidence            7788888888888888999999999999999999999999999999999999986655  34789999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccccc-----------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeE
Q 025124           85 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIR  153 (257)
Q Consensus        85 ~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~-----------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~  153 (257)
                      +++++++|+|.+          .|+||++||..+..+.           ++...|+++|+++++|+++++.|+. ++||+
T Consensus       134 ~l~~~~~~~~~~----------~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~  202 (287)
T 3pxx_A          134 NTVHAALPYLTS----------GASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLA-PQSIR  202 (287)
T ss_dssp             HHHHHHGGGCCT----------TCEEEEECCHHHHHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHG-GGTCE
T ss_pred             HHHHHHHHHhhc----------CcEEEEeccchhcccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHh-hcCcE
Confidence            999999999832          6899999999888766           6778999999999999999999999 88999


Q ss_pred             EEEEecCcccCCCCCCCC------------ChHHHHHH--hhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecC
Q 025124          154 VNGIAPGPIKDTAGVSKL------------APEEIRSK--ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDG  219 (257)
Q Consensus       154 v~~v~Pg~v~t~~~~~~~------------~~~~~~~~--~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dg  219 (257)
                      ||+|+||+++|++.....            ...+....  .....+ +++.+|+|+|++++||+++.+++++|+++.+||
T Consensus       203 vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdG  281 (287)
T 3pxx_A          203 ANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAMQAMP-TPYVEASDISNAVCFLASDESRYVTGLQFKVDA  281 (287)
T ss_dssp             EEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHGGGGCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             EEEEecCccccccccccchhhhhccccccchhHHHHhhhhhhcccC-CCCCCHHHHHhhHheecchhhcCCCCceEeECc
Confidence            999999999999864310            00111111  222233 678999999999999999999999999999999


Q ss_pred             CcccC
Q 025124          220 GNWLS  224 (257)
Q Consensus       220 g~~~~  224 (257)
                      |.++.
T Consensus       282 G~~~~  286 (287)
T 3pxx_A          282 GAMLK  286 (287)
T ss_dssp             TGGGG
T ss_pred             hhhhc
Confidence            98753

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=4.8e-36  Score=246.81  Aligned_cols=209  Identities=30%  Similarity=0.298  Sum_probs=180.7

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.+++   +.++.++.+|++|+++++++++++.+++|++|+||||||+....++.+.+.++|+..+++|+.
T Consensus        36 ~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~  112 (254)
T 1hdc_A           36 DVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLT  112 (254)
T ss_dssp             ESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTH
T ss_pred             eCCHHHHHHHHHHh---CCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhH
Confidence            67888877776655   457889999999999999999999999999999999999877778888999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.++++++|.|++++        .|+||++||..+..+.++...|+++|+++++|+++++.|+. ++||++++|+||+
T Consensus       113 g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~  183 (254)
T 1hdc_A          113 GVFIGMKTVIPAMKDAG--------GGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELG-TDRIRVNSVHPGM  183 (254)
T ss_dssp             HHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECS
T ss_pred             HHHHHHHHHHHHHHHcC--------CCEEEEECchhhccCCCCchhHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeccc
Confidence            99999999999999876        69999999999999989999999999999999999999999 8999999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCC-CHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFG-EKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      ++|++.....  ...........+.+++. +|+|+|+.+++|+++.+.+++|+.+.+|||..+.
T Consensus       184 v~t~~~~~~~--~~~~~~~~~~~p~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~~  245 (254)
T 1hdc_A          184 TYTPMTAETG--IRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGGWTTG  245 (254)
T ss_dssp             BCCHHHHHHT--CCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTTS
T ss_pred             CcCccccccc--hhHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCCCCCEEEECCCcccc
Confidence            9988632100  00001122234667788 9999999999999988889999999999997664

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=5.4e-35  Score=244.43  Aligned_cols=213  Identities=23%  Similarity=0.215  Sum_probs=180.2

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIE   77 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~   77 (257)
                      +|+.+ +++..+++.+..+++.++.+|++|+++++++++++.+++|++|+||||||+...    .++.+.+.++|+..++
T Consensus        54 ~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~  132 (285)
T 2p91_A           54 YATPK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMD  132 (285)
T ss_dssp             ESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHH
T ss_pred             eCCHH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHH
Confidence            46654 444555555433347889999999999999999999999999999999997654    5677889999999999


Q ss_pred             HHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEE
Q 025124           78 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (257)
Q Consensus        78 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v  157 (257)
                      +|+.|++.++++++|.|.++         .|+||++||..+..+.+++..|+++|+++++|+++++.|+. ++||+||+|
T Consensus       133 ~N~~g~~~l~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v  202 (285)
T 2p91_A          133 ISVYSLIALTRELLPLMEGR---------NGAIVTLSYYGAEKVVPHYNVMGIAKAALESTVRYLAYDIA-KHGHRINAI  202 (285)
T ss_dssp             HHTHHHHHHHHHHGGGGTTS---------CCEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEE
T ss_pred             HhhHHHHHHHHHHHHHHHHc---------CCEEEEEccchhccCCCCccHHHHHHHHHHHHHHHHHHHhc-ccCcEEEEE
Confidence            99999999999999999753         58999999999999988999999999999999999999999 899999999


Q ss_pred             ecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCC
Q 025124          158 APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSN  225 (257)
Q Consensus       158 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~  225 (257)
                      +||+++|++..................+.+++.+|+|+|+.+++|+++.+.+++|+.+.+|||..+..
T Consensus       203 ~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgg~~~~~  270 (285)
T 2p91_A          203 SAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTAVFLCSDWARAITGEVVHVDNGYHIMG  270 (285)
T ss_dssp             EECCCCCSCC--CTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGBS
T ss_pred             EeCcccCchhhcccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCcccCCCCCEEEECCCccccc
Confidence            99999998754322223334444556678889999999999999999888999999999999987643

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=3.7e-35  Score=245.20  Aligned_cols=210  Identities=29%  Similarity=0.398  Sum_probs=181.4

Q ss_pred             CCcHH-HHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            2 GRRKT-VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~~-~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      +|+.+ .++++.+++.+.+.++.++.+|++|.++++.+++++.+.++++|+||||||+....++.+.+.++|+..+++|+
T Consensus        60 ~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~  139 (283)
T 1g0o_A           60 YANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINT  139 (283)
T ss_dssp             ESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             eCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhh
Confidence            45544 46777788887788899999999999999999999999999999999999988777888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccccccc-chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~-~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      .|+++++++++|.|.  .        .|+||++||..+..+.+. ...|+++|+++++|+++++.|+. ++||+||+|+|
T Consensus       140 ~g~~~l~~~~~~~~~--~--------~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~P  208 (283)
T 1g0o_A          140 RGQFFVAREAYKHLE--I--------GGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMA-DKKITVNVVAP  208 (283)
T ss_dssp             HHHHHHHHHHHHHSC--T--------TCEEEEECCGGGTCSSCSSCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEE
T ss_pred             HHHHHHHHHHHHHHh--c--------CCeEEEEechhhccCCCCCCcchHHHHHHHHHHHHHHHHHhc-ccCeEEEEEec
Confidence            999999999999992  2        689999999998887664 88999999999999999999999 89999999999


Q ss_pred             CcccCCCCCCCC---------ChHHHHHHhhh--hccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          160 GPIKDTAGVSKL---------APEEIRSKATD--YMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       160 g~v~t~~~~~~~---------~~~~~~~~~~~--~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      |+++|++.....         ...+....+..  ..+.+++.+|+|+|+.++||+++.+++++|+.+.+|||+.
T Consensus       209 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdgG~~  282 (283)
T 1g0o_A          209 GGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGAC  282 (283)
T ss_dssp             CCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             CcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCcc
Confidence            999998642110         01223333434  5678889999999999999999989999999999999964

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=2e-35  Score=242.98  Aligned_cols=210  Identities=26%  Similarity=0.290  Sum_probs=182.0

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|+.++++++.+++   +.++.++.+|++|+++++++++++.++++++|+||||||+....++.+.+.++|++.+++|+
T Consensus        36 ~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~  112 (253)
T 1hxh_A           36 SDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINT  112 (253)
T ss_dssp             ECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHT
T ss_pred             EeCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhc
Confidence            368888888877776   56799999999999999999999999999999999999987778888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCC--CeEEEEEe
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY--AIRVNGIA  158 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~--gi~v~~v~  158 (257)
                      .+++.++++++|.|+++         +|+||++||..+..+.++...|+++|+++++|+++++.|+. ++  ||++++|+
T Consensus       113 ~~~~~~~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~~gi~v~~v~  182 (253)
T 1hxh_A          113 ESVFIGCQQGIAAMKET---------GGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCR-KQGYAIRVNSIH  182 (253)
T ss_dssp             HHHHHHHHHHHHHHTTT---------CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHH-HHTCCEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHc---------CCEEEEEcchhhcCCCCCCccHHHHHHHHHHHHHHHHHHhh-hcCCCeEEEEEE
Confidence            99999999999999864         48999999999999999999999999999999999999998 77  99999999


Q ss_pred             cCcccCCCCCCCCChHHHHHH-hhh---hccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          159 PGPIKDTAGVSKLAPEEIRSK-ATD---YMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       159 Pg~v~t~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      ||+++|++...... ...... +..   ..+.+++.+|+|+|+.+++|+++.+++++|+.+.+|||....
T Consensus       183 Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~~~~  251 (253)
T 1hxh_A          183 PDGIYTPMMQASLP-KGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMSGSELHADNSILGM  251 (253)
T ss_dssp             ESEECCHHHHHHSC-TTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSSCTTT
T ss_pred             eCCccCchhhhccc-hhhhHHHHhhhhccCccCCCCCHHHHHHHHHHHcCccccCCCCcEEEECCCcccc
Confidence            99999986432111 011111 222   456778899999999999999998899999999999997653

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=4e-35  Score=241.57  Aligned_cols=208  Identities=30%  Similarity=0.401  Sum_probs=177.7

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|++++ +++.+++.    + .++.+|++|+++++++++++.++++++|+||||||.....++.+.+.++|++.+++|+.
T Consensus        37 ~r~~~~-~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~  110 (256)
T 2d1y_A           37 DLRPEG-KEVAEAIG----G-AFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLT  110 (256)
T ss_dssp             ESSTTH-HHHHHHHT----C-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTH
T ss_pred             eCChhH-HHHHHHhh----C-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            466665 55555542    4 78999999999999999999999999999999999887788889999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.++++++|.|++++        .|+||++||..+..+.++...|+++|+++++|+++++.|+. ++||++|+|+||+
T Consensus       111 g~~~~~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~  181 (256)
T 2d1y_A          111 APMHLSALAAREMRKVG--------GGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLA-PLRIRVNAVAPGA  181 (256)
T ss_dssp             HHHHHHHHHHHHHHTTT--------CEEEEEECCGGGTSBCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECS
T ss_pred             HHHHHHHHHHHHHHhcC--------CcEEEEEccccccCCCCCChhHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEeeCC
Confidence            99999999999999865        69999999999999999999999999999999999999999 8999999999999


Q ss_pred             ccCCCCCCC----CChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          162 IKDTAGVSK----LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       162 v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      +.|++....    ....+....+....+.+++.+|+|+|+.+++|+++.+.+++|+.+.+|||..+.
T Consensus       182 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~v~gG~~~~  248 (256)
T 2d1y_A          182 IATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITGAILPVDGGMTAS  248 (256)
T ss_dssp             BCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             ccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCCEEEECCCcccc
Confidence            998864221    101112223334557788999999999999999988889999999999997654

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.6e-35  Score=240.78  Aligned_cols=214  Identities=20%  Similarity=0.196  Sum_probs=174.3

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|+.++++++.+++.+.+.++.++.+|++|+++++++++++.+++|++|+||||||+....++.+.+.++|++++++|+
T Consensus        34 ~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~  113 (264)
T 3tfo_A           34 GARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNI  113 (264)
T ss_dssp             EESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             EECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHh
Confidence            36899999999999998888899999999999999999999999999999999999998888899999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .|++.++++++|.|++++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+  + ||+||+|+||
T Consensus       114 ~g~~~l~~~~~~~m~~~~--------~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~--~-gIrvn~v~PG  182 (264)
T 3tfo_A          114 KGVLWGIGAVLPIMEAQR--------SGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQES--T-NIRVTCVNPG  182 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHC--S-SEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHhCC--------CeEEEEEcCHHHcccCCCChhHHHHHHHHHHHHHHHHHhC--C-CCEEEEEecC
Confidence            999999999999999876        7999999999999999999999999999999999999996  4 9999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCC
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRD  228 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~  228 (257)
                      +++|++....... ...... . .......+|+|+|+.+++|+++...+.+|+.+..++|..+.....
T Consensus       183 ~v~T~~~~~~~~~-~~~~~~-~-~~~~~~~~pedvA~~v~~l~s~~~~~~~~~i~i~p~~~~~~~~~~  247 (264)
T 3tfo_A          183 VVESELAGTITHE-ETMAAM-D-TYRAIALQPADIARAVRQVIEAPQSVDTTEITIRPTASGNAENLY  247 (264)
T ss_dssp             CC--------------------------CCCHHHHHHHHHHHHHSCTTEEEEEEEEEECC--------
T ss_pred             CCcCcccccccch-hHHHHH-H-hhhccCCCHHHHHHHHHHHhcCCccCccceEEEecCccccccCcc
Confidence            9999875432211 111100 0 011225799999999999999999999999999999876654433

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=2.7e-35  Score=241.73  Aligned_cols=205  Identities=19%  Similarity=0.163  Sum_probs=174.0

Q ss_pred             CCCcHHHHHHHHHHHHhc--C-CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSL--G-IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIE   77 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~--~-~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~   77 (257)
                      ++|+.++++++.+++.+.  + .++.++.+|++|.++++++++++.+++|++|++|||||+....++ +.+.++|++.++
T Consensus        37 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~-~~~~~~~~~~~~  115 (250)
T 3nyw_A           37 IARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSL-SEPVDNFRKIME  115 (250)
T ss_dssp             EESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCC-SCHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCC-CCCHHHHHHHHH
Confidence            368999999999998875  3 678999999999999999999999999999999999998877777 789999999999


Q ss_pred             HHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEE
Q 025124           78 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (257)
Q Consensus        78 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v  157 (257)
                      +|+.+++.++++++|+|++++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|
T Consensus       116 vN~~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v  186 (250)
T 3nyw_A          116 INVIAQYGILKTVTEIMKVQK--------NGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELA-PLGIRVTTL  186 (250)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHT--------CEEEEEECC-------CCTTHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHhCC--------CeEEEEEccHHhcCCCCCCcchHHHHHHHHHHHHHHHHHhh-hcCcEEEEE
Confidence            999999999999999999876        79999999999998777789999999999999999999999 899999999


Q ss_pred             ecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCc-ccCcEEEecCCcccCC
Q 025124          158 APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKY-VNGNTLIVDGGNWLSN  225 (257)
Q Consensus       158 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~-~~G~~~~~dgg~~~~~  225 (257)
                      +||++.|++..          ......+..++.+|+|+++.+++|+++.... +++..+.+|||....+
T Consensus       187 ~PG~v~T~~~~----------~~~~~~~~~~~~~p~dva~~v~~l~s~~~~~~~~~~~i~vd~~~~~~~  245 (250)
T 3nyw_A          187 CPGWVNTDMAK----------KAGTPFKDEEMIQPDDLLNTIRCLLNLSENVCIKDIVFEMKKSIIEGH  245 (250)
T ss_dssp             EESSBCSHHHH----------HTTCCSCGGGSBCHHHHHHHHHHHHTSCTTEECCEEEEEEHHHHHC--
T ss_pred             ecCcccCchhh----------hcCCCcccccCCCHHHHHHHHHHHHcCCCceEeeEEEEEeeccccccc
Confidence            99999987532          1222345567899999999999999966554 7789999999976554

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=2.2e-35  Score=246.84  Aligned_cols=203  Identities=21%  Similarity=0.229  Sum_probs=180.5

Q ss_pred             HHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHH
Q 025124            7 VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM   86 (257)
Q Consensus         7 ~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l   86 (257)
                      .++++.+++.+.+.++.++.||++|+++++++++++.+++|++|++|||||+....++.+.+.++|++++++|+.+++++
T Consensus        52 ~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l  131 (285)
T 3sc4_A           52 TIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAV  131 (285)
T ss_dssp             CHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHH
Confidence            57778888888888999999999999999999999999999999999999998888999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCCCCCCCCceEEEEccccccccc-ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC-cccC
Q 025124           87 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG-PIKD  164 (257)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~-~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg-~v~t  164 (257)
                      +++++|+|++++        .|+||++||..+..+. ++...|++||+|+++|+++++.|+. ++||+||+|+|| .+.|
T Consensus       132 ~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~e~~-~~gI~vn~v~PG~~v~t  202 (285)
T 3sc4_A          132 SQSCIPHMKGRD--------NPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIAEELR-DAGIASNTLWPRTTVAT  202 (285)
T ss_dssp             HHHHGGGTTTSS--------SCEEEECCCCCCCSGGGSCSHHHHHHHHHHHHHHHHHHHHTG-GGTCEEEEEECSSCBCC
T ss_pred             HHHHHHHHHHcC--------CcEEEEECChhhccCCCCCCchHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEeCCCcccc
Confidence            999999998876        7899999999988886 7789999999999999999999999 899999999999 5776


Q ss_pred             CCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCC
Q 025124          165 TAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRD  228 (257)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~  228 (257)
                      ++.         ........+.+++.+|+|+|+.+++|+++.+ +++|+.+.+|||+.......
T Consensus       203 ~~~---------~~~~~~~~~~~r~~~pedvA~~~~~l~s~~~-~~tG~~i~~dgg~~~~g~~~  256 (285)
T 3sc4_A          203 AAV---------QNLLGGDEAMARSRKPEVYADAAYVVLNKPS-SYTGNTLLCEDVLLESGVTD  256 (285)
T ss_dssp             HHH---------HHHHTSCCCCTTCBCTHHHHHHHHHHHTSCT-TCCSCEEEHHHHHHHHTCCC
T ss_pred             HHH---------HhhccccccccCCCCHHHHHHHHHHHhCCcc-cccceEEEEcCchhccCccc
Confidence            532         2223344567788999999999999999888 99999999999876554433

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=4.4e-35  Score=240.80  Aligned_cols=205  Identities=18%  Similarity=0.126  Sum_probs=167.9

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|+.++++++.+++.+.+.++.++.+|++|+++++++++++.++ +++|++|||||+....++.+.+.++|++.+++|+
T Consensus        37 ~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~  115 (252)
T 3h7a_A           37 GRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH-APLEVTIFNVGANVNFPILETTDRVFRKVWEMAC  115 (252)
T ss_dssp             EESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             EeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh-CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHh
Confidence            368899999999999988889999999999999999999999999 9999999999988888899999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEE-EEEec
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRV-NGIAP  159 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v-~~v~P  159 (257)
                      .|++.++++++|.|++++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+| |+|+|
T Consensus       116 ~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~v~n~v~P  186 (252)
T 3h7a_A          116 WAGFVSGRESARLMLAHG--------QGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELM-PKNIHVAHLIID  186 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CEEEEEEEEGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHhcC--------CcEEEEECCHHHcCCCCCCccHHHHHHHHHHHHHHHHHHhh-hcCCEEEEEecC
Confidence            999999999999999876        79999999999999999999999999999999999999999 899999 99999


Q ss_pred             CcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEec
Q 025124          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVD  218 (257)
Q Consensus       160 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~d  218 (257)
                      |+++|++.....  ...........+.+ +.+|+|+|+.+++|++++...++|+.....
T Consensus       187 G~v~T~~~~~~~--~~~~~~~~~~~~~~-~~~pedvA~~~~~l~s~~~~~~~~~i~~~~  242 (252)
T 3h7a_A          187 SGVDTAWVRERR--EQMFGKDALANPDL-LMPPAAVAGAYWQLYQQPKSAWTFEMEIRP  242 (252)
T ss_dssp             ------------------------------CCHHHHHHHHHHHHHCCGGGBCSEEEEBC
T ss_pred             CccCChhhhccc--hhhhhhhhhcCCcc-CCCHHHHHHHHHHHHhCchhcceeeEEeee
Confidence            999998765432  12222333444555 899999999999999988888888876554

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=3.7e-35  Score=244.23  Aligned_cols=211  Identities=23%  Similarity=0.199  Sum_probs=180.7

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIE   77 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~   77 (257)
                      +|+.+ +++..+++.+..+++.++.+|++|+++++++++++.+++|++|+||||||+...    .++.+.+.++|+.+++
T Consensus        39 ~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~  117 (275)
T 2pd4_A           39 YLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAME  117 (275)
T ss_dssp             ESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHH
T ss_pred             eCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHH
Confidence            46654 444555555443357889999999999999999999999999999999998654    5777899999999999


Q ss_pred             HHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEE
Q 025124           78 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (257)
Q Consensus        78 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v  157 (257)
                      +|+.+++.++++++|.|++          .|+||++||..+..+.++...|+++|+++++|+++++.|+. ++||+||+|
T Consensus       118 ~N~~g~~~l~~~~~~~~~~----------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v  186 (275)
T 2pd4_A          118 ISVYSLIELTNTLKPLLNN----------GASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLG-KHHIRVNAL  186 (275)
T ss_dssp             HHTHHHHHHHHHHGGGEEE----------EEEEEEEECGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEE
T ss_pred             HHhHHHHHHHHHHHHHhcc----------CCEEEEEecchhcCCCCCchhhHHHHHHHHHHHHHHHHHhh-hcCeEEEEE
Confidence            9999999999999999864          58899999999999989999999999999999999999999 899999999


Q ss_pred             ecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          158 APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       158 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      +||+++|++.............+....|.+++.+|+|+|+.+++|+++.+.+++|+.+.+|||..+.
T Consensus       187 ~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgg~~~~  253 (275)
T 2pd4_A          187 SAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGYHVM  253 (275)
T ss_dssp             EECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             eeCccccchhhhccccHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCcccC
Confidence            9999999875432222333444555678888999999999999999988899999999999998763

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=1.3e-35  Score=246.82  Aligned_cols=196  Identities=22%  Similarity=0.270  Sum_probs=171.9

Q ss_pred             HHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHH
Q 025124            7 VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM   86 (257)
Q Consensus         7 ~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l   86 (257)
                      .++++.+++...+.++.++.+|++|+++++++++++.+++|++|++|||||+....++.+.+.++|++++++|+.+++++
T Consensus        49 ~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l  128 (274)
T 3e03_A           49 TIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVC  128 (274)
T ss_dssp             CHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHH
T ss_pred             HHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHH
Confidence            36777778877788999999999999999999999999999999999999988888889999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCCCCCCCCceEEEEcccccccc--cccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC-ccc
Q 025124           87 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTA--TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG-PIK  163 (257)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~--~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg-~v~  163 (257)
                      +++++|+|++++        .|+||++||..+..+  .++...|++||+|+++|+++++.|+. ++||+||+|+|| ++.
T Consensus       129 ~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~-~~gI~vn~v~PG~~v~  199 (274)
T 3e03_A          129 AQACLPHLLQAP--------NPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGLAAEFG-PQGVAINALWPRTVIA  199 (274)
T ss_dssp             HHHHHHHHTTSS--------SCEEEECCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEECSBCBC
T ss_pred             HHHHHHHHHhcC--------CceEEEECChHhcCCCCCCCCchHHHHHHHHHHHHHHHHHHhh-hcCEEEEEEECCcccc
Confidence            999999999876        799999999998888  67888999999999999999999999 899999999999 688


Q ss_pred             CCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          164 DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       164 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      |++...           ....+..++.+|+|+|+.+++|+++.+++++|+.+ +++|.+.
T Consensus       200 T~~~~~-----------~~~~~~~~~~~pedvA~~v~~l~s~~~~~itG~~i-~~~g~~~  247 (274)
T 3e03_A          200 TDAINM-----------LPGVDAAACRRPEIMADAAHAVLTREAAGFHGQFL-IDDEVLA  247 (274)
T ss_dssp             C------------------CCCGGGSBCTHHHHHHHHHHHTSCCTTCCSCEE-EHHHHHH
T ss_pred             cchhhh-----------cccccccccCCHHHHHHHHHHHhCccccccCCeEE-EcCcchh
Confidence            876411           11123345789999999999999999999999999 7777544

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=3.8e-35  Score=242.33  Aligned_cols=211  Identities=22%  Similarity=0.235  Sum_probs=179.8

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIE   77 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~   77 (257)
                      +|+.+ +++..+++.+....+.++.+|++|+++++++++++.+++|++|+||||||+...    .++.+.+.++|+..++
T Consensus        41 ~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~  119 (261)
T 2wyu_A           41 YQAER-LRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALE  119 (261)
T ss_dssp             ESCGG-GHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHH
T ss_pred             cCCHH-HHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHH
Confidence            45554 444445554432347899999999999999999999999999999999997653    6777889999999999


Q ss_pred             HHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEE
Q 025124           78 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (257)
Q Consensus        78 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v  157 (257)
                      +|+.++++++++++|.|++          .|+||++||..+..+.++...|+++|+++++|+++++.|+. ++||++|+|
T Consensus       120 ~N~~g~~~l~~~~~~~~~~----------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v  188 (261)
T 2wyu_A          120 VSAYSLVAVARRAEPLLRE----------GGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELG-PKGVRVNAI  188 (261)
T ss_dssp             HHTHHHHHHHHHHTTTEEE----------EEEEEEEECGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEE
T ss_pred             HhhHHHHHHHHHHHHHhcc----------CCEEEEEecccccCCCCCchHHHHHHHHHHHHHHHHHHHHh-hhCcEEEEE
Confidence            9999999999999998864          58899999999998888899999999999999999999999 899999999


Q ss_pred             ecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          158 APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       158 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      +||+++|++.............+....|.+++.+|+|+|+.+++|+++.+.+++|+.+.+|||..+.
T Consensus       189 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~  255 (261)
T 2wyu_A          189 SAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYHIM  255 (261)
T ss_dssp             EECCCCCTGGGGCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             eeCCCcCchhhhccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCCcccc
Confidence            9999999875432222334444555678888999999999999999988899999999999997764

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=6.2e-35  Score=243.13  Aligned_cols=214  Identities=28%  Similarity=0.338  Sum_probs=174.3

Q ss_pred             CCCcHHHHHHHHHHHH---hcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCC----CHHHHH
Q 025124            1 MGRRKTVLRSAVAALH---SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL----SPNGFR   73 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~---~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~----~~~~~~   73 (257)
                      ++|++++++++.+++.   ..+.++.++.+|++|+++++++++++.+++|++|+||||||.....++.+.    +.++|+
T Consensus        36 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~  115 (278)
T 1spx_A           36 TGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYD  115 (278)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHH
T ss_pred             EeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHH
Confidence            3688889998888884   334578999999999999999999999999999999999998776777777    999999


Q ss_pred             HHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccc-ccccccchhhHHHHHHHHHHHHHHHHHhcCCCCe
Q 025124           74 TVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH-YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAI  152 (257)
Q Consensus        74 ~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~-~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi  152 (257)
                      ..+++|+.+++.++++++|.|+++         +|+||++||..+ ..+.++...|+++|+++++|+++++.|+. ++||
T Consensus       116 ~~~~~N~~g~~~l~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi  185 (278)
T 1spx_A          116 ATLNLNLRSVIALTKKAVPHLSST---------KGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLI-QHGI  185 (278)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHHHH---------TCEEEEECCTTSSSSCCTTSHHHHHHHHHHHHHHHHHHHHHG-GGTC
T ss_pred             HHHHHHhHHHHHHHHHHHHHHhhc---------CCeEEEEecccccccCCCCccHHHHHHHHHHHHHHHHHHHHH-hcCc
Confidence            999999999999999999999875         488999999998 88888899999999999999999999998 8999


Q ss_pred             EEEEEecCcccCCCCCCCCCh-HHH------HHHhhhhccCCCCCCHHhHHHHHHHhccCCCCc-ccCcEEEecCCcccC
Q 025124          153 RVNGIAPGPIKDTAGVSKLAP-EEI------RSKATDYMAAYKFGEKWDIAMAALYLASDAGKY-VNGNTLIVDGGNWLS  224 (257)
Q Consensus       153 ~v~~v~Pg~v~t~~~~~~~~~-~~~------~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~-~~G~~~~~dgg~~~~  224 (257)
                      ++++|+||++.|++....... ...      ........|.+++.+|+|+|+.+++|+++.+.+ ++|+.+.+|||..+.
T Consensus       186 ~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~  265 (278)
T 1spx_A          186 RVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLI  265 (278)
T ss_dssp             EEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             EEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCCcCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccc
Confidence            999999999999875432111 111      233344567788999999999999999987776 999999999997654

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=1.1e-34  Score=239.50  Aligned_cols=201  Identities=21%  Similarity=0.253  Sum_probs=166.2

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.+++.+   ++.+.+  +.++.+|++|+++++++++++.+++|++|+||||||+..... .+.+.++|++++++|+.
T Consensus        58 ~r~~~~~~~---~~~~~~--~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~-~~~~~~~~~~~~~vN~~  131 (260)
T 3gem_A           58 YRTEHASVT---ELRQAG--AVALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAET-PGEEADNFTRMFSVHML  131 (260)
T ss_dssp             ESSCCHHHH---HHHHHT--CEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCC-TTCHHHHHHHHHHHHTH
T ss_pred             eCChHHHHH---HHHhcC--CeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCccCCCC-CCCCHHHHHHHHHHHHH
Confidence            456555433   333333  788999999999999999999999999999999999776555 56788999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      |+++++++++|+|.+++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. + +|+||+|+||+
T Consensus       132 g~~~~~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~-~Irvn~v~PG~  201 (260)
T 3gem_A          132 APYLINLHCEPLLTASE--------VADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARFA-P-LVKVNGIAPAL  201 (260)
T ss_dssp             HHHHHHHHHHHHHHTSS--------SCEEEEECCGGGGTCCSSCHHHHHHHHHHHHHHHHHHHHHT-T-TCEEEEEEECT
T ss_pred             HHHHHHHHHHHHHHhcC--------CcEEEEECChhhcCCCCCcHhHHHHHHHHHHHHHHHHHHHC-C-CCEEEEEeecc
Confidence            99999999999999876        69999999999999999999999999999999999999998 6 69999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      +.|++..    ............+.+++.+|+|+|++++||+  .+.+++|+++.+|||..+.
T Consensus       202 v~t~~~~----~~~~~~~~~~~~p~~r~~~~edva~~v~~L~--~~~~itG~~i~vdGG~~~~  258 (260)
T 3gem_A          202 LMFQPKD----DAAYRANALAKSALGIEPGAEVIYQSLRYLL--DSTYVTGTTLTVNGGRHVK  258 (260)
T ss_dssp             TCC-------------------CCSCCCCCTHHHHHHHHHHH--HCSSCCSCEEEESTTTTTC
T ss_pred             cccCCCC----CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh--hCCCCCCCEEEECCCcccC
Confidence            9988643    2233444556678889999999999999999  4688999999999998764

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=1.6e-34  Score=236.76  Aligned_cols=213  Identities=24%  Similarity=0.390  Sum_probs=185.9

Q ss_pred             CCcHHHHHHHHHHH-HhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCC---CCCCCHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAAL-HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP---AEDLSPNGFRTVIE   77 (257)
Q Consensus         2 ~r~~~~l~~~~~~l-~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~---~~~~~~~~~~~~~~   77 (257)
                      +|+.++++++.+++ .+.+.++.++.+|++|+++++++++++.++++++|+||||||.....+   +.+.+.++|+..++
T Consensus        33 ~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~  112 (250)
T 2cfc_A           33 DLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMA  112 (250)
T ss_dssp             ESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHH
T ss_pred             eCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHH
Confidence            68888888888887 444667999999999999999999999999999999999999766555   77889999999999


Q ss_pred             HHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEE
Q 025124           78 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (257)
Q Consensus        78 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v  157 (257)
                      +|+.+++.+++++++.|.+++        .++||++||..+..+.++...|+++|++++.|+++++.|+. ++||++++|
T Consensus       113 ~n~~~~~~~~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~-~~gi~v~~v  183 (250)
T 2cfc_A          113 VNVRGIFLGCRAVLPHMLLQG--------AGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYA-GSGIRCNAV  183 (250)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEE
T ss_pred             HhhHHHHHHHHHHHHHHHhCC--------CCEEEEECChhhccCCCCchhHHHHHHHHHHHHHHHHHHhc-ccCeEEEEE
Confidence            999999999999999999876        68999999999998888999999999999999999999998 889999999


Q ss_pred             ecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          158 APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       158 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +||++.|++..................+.+++.+|+|+|+.+++++++.+.+++|+.+.+|||...
T Consensus       184 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~  249 (250)
T 2cfc_A          184 CPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVNGAALVMDGAYTA  249 (250)
T ss_dssp             EECSBCSTTTHHHHTSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSTTCTTCCSCEEEESTTGGG
T ss_pred             EeCcCccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhhcccCCEEEECCceec
Confidence            999999987532111223333344556778899999999999999998888999999999999653

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=4.8e-35  Score=242.25  Aligned_cols=211  Identities=20%  Similarity=0.188  Sum_probs=178.5

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCC-CCHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAED-LSPNGFRTVI   76 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~----~~~~~-~~~~~~~~~~   76 (257)
                      +|+. ++++..+++.+......++.+|++|+++++++++++.++++++|+||||||+...    .++.+ .+.++|+..+
T Consensus        42 ~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~  120 (265)
T 1qsg_A           42 YQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAH  120 (265)
T ss_dssp             ESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHH
T ss_pred             cCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHH
Confidence            4555 3444555555443345789999999999999999999999999999999997653    56667 8999999999


Q ss_pred             HHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEE
Q 025124           77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (257)
Q Consensus        77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~  156 (257)
                      ++|+.++++++++++|.|.+          .|+||++||..+..+.++...|+++|+++++|+++++.|+. ++||+|++
T Consensus       121 ~~N~~g~~~l~~~~~~~~~~----------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~  189 (265)
T 1qsg_A          121 DISSYSFVAMAKACRSMLNP----------GSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMG-PEGVRVNA  189 (265)
T ss_dssp             HHHTHHHHHHHHHHGGGEEE----------EEEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHHHHHHHHT-TTTEEEEE
T ss_pred             HHHhHHHHHHHHHHHHHhcc----------CCEEEEEcchhhccCCCCchHHHHHHHHHHHHHHHHHHHhh-hcCeEEEE
Confidence            99999999999999999864          58899999999998888999999999999999999999999 89999999


Q ss_pred             EecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          157 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       157 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      |+||+++|++.............+....|.+++.+|+|+|+.+++|+++.+.+++|+.+.+|||..+.
T Consensus       190 v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          190 ISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIA  257 (265)
T ss_dssp             EEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred             EEeCCCccchhhcccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCccCCEEEECCCcCCC
Confidence            99999999875432222333444455567888999999999999999988899999999999998765

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=8.4e-35  Score=240.48  Aligned_cols=211  Identities=26%  Similarity=0.365  Sum_probs=180.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|++++++++.+++.   .++.++.+|++|+++++++++++.+++|++|+||||||+....++.+.+.++|+..+++|+.
T Consensus        43 ~r~~~~~~~~~~~~~---~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~  119 (263)
T 3ak4_A           43 DLDVMAAQAVVAGLE---NGGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNAR  119 (263)
T ss_dssp             ESCHHHHHHHHHTCT---TCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTH
T ss_pred             eCCHHHHHHHHHHHh---cCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhH
Confidence            577777776655543   26888999999999999999999999999999999999877778888999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.++++++|.|.+++.       .|+||++||..+..+.++...|+++|+++++|+++++.|+. ++||++++|+||+
T Consensus       120 g~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~  191 (263)
T 3ak4_A          120 GVFLANQIACRHFLASNT-------KGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMA-PKNIRVNCVCPGF  191 (263)
T ss_dssp             HHHHHHHHHHHHHHHTTC-------CCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECS
T ss_pred             HHHHHHHHHHHHHHhcCC-------CeEEEEecccccccCCCCchhHHHHHHHHHHHHHHHHHHHh-HcCeEEEEEeccc
Confidence            999999999999987531       48999999999998888999999999999999999999999 8899999999999


Q ss_pred             ccCCCCCCCC---------ChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          162 IKDTAGVSKL---------APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       162 v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ++|++.....         ........+....+.+++.+|+|+|+.+++|+++.+++++|+.+.+|||..+
T Consensus       192 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~  262 (263)
T 3ak4_A          192 VKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASDAARFMTGQGINVTGGVRM  262 (263)
T ss_dssp             BTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSSC
T ss_pred             ccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECcCEeC
Confidence            9998642110         0022223344556778899999999999999998888999999999999654

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=2.2e-36  Score=257.78  Aligned_cols=194  Identities=24%  Similarity=0.247  Sum_probs=171.8

Q ss_pred             eEEEEccCCCH--H------------------HHHHHHHHHHHHhCCccEEEeCCCCC--CCCCCCCCCHHHHHHHHHHH
Q 025124           22 AIGLEGDVRKR--E------------------DAVRVVESTINHFGKLDILVNAAAGN--FLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus        22 ~~~~~~Dls~~--~------------------~~~~~~~~~~~~~g~id~li~~ag~~--~~~~~~~~~~~~~~~~~~~n   79 (257)
                      +.++.+|+++.  +                  +++++++++.+++|+||+||||||+.  ...++.+.+.++|++++++|
T Consensus        67 ~~~~~~Dv~~~~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN  146 (329)
T 3lt0_A           67 LDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKS  146 (329)
T ss_dssp             EEEEECCTTCSSGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHH
T ss_pred             cccccccccccchhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHH
Confidence            57788999888  7                  99999999999999999999999974  35788999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccch-hhHHHHHHHHHHHHHHHHHhcCC-CCeEEEEE
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI-HVSAAKAAVDSITRSLALEWGTD-YAIRVNGI  157 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~-~Y~~sK~a~~~l~~~la~e~~~~-~gi~v~~v  157 (257)
                      +.|++.++++++|+|++          .|+||++||..+..+.++.. .|++||+|+.+|+++|+.|+. + +||+|++|
T Consensus       147 ~~g~~~l~~~~~p~m~~----------~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~-~~~gI~vn~v  215 (329)
T 3lt0_A          147 SYSLISLCKYFVNIMKP----------QSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLG-RNYNIRINTI  215 (329)
T ss_dssp             THHHHHHHHHHGGGEEE----------EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHH-HHHCCEEEEE
T ss_pred             hHHHHHHHHHHHHHHhh----------CCeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhC-CccCeEEEEE
Confidence            99999999999999976          48899999999999999986 999999999999999999998 8 89999999


Q ss_pred             ecCcccCCCCCCCCCh-------------------------------------------HHHHHHhhhhccCCCCCCHHh
Q 025124          158 APGPIKDTAGVSKLAP-------------------------------------------EEIRSKATDYMAAYKFGEKWD  194 (257)
Q Consensus       158 ~Pg~v~t~~~~~~~~~-------------------------------------------~~~~~~~~~~~~~~~~~~~~d  194 (257)
                      +||+++|+|.......                                           ++..+......|++++.+|+|
T Consensus       216 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pee  295 (329)
T 3lt0_A          216 SAGPLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTD  295 (329)
T ss_dssp             EECCCCCHHHHTCC------------------------------------------CHHHHHHHHHHHHSSSCSCCCHHH
T ss_pred             ecceeechhHhhhhhhcccccccccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHH
Confidence            9999999876443210                                           012445566788999999999


Q ss_pred             HHHHHHHhccCCCCcccCcEEEecCCcccCCC
Q 025124          195 IAMAALYLASDAGKYVNGNTLIVDGGNWLSNP  226 (257)
Q Consensus       195 va~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~  226 (257)
                      +|+.++||+++.+.+++|+.+.+|||+.+...
T Consensus       296 vA~~v~fL~s~~a~~itG~~i~vdGG~~~~~~  327 (329)
T 3lt0_A          296 IGSVASFLLSRESRAITGQTIYVDNGLNIMFL  327 (329)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGGGCSS
T ss_pred             HHHHHHHHhCchhccccCcEEEEcCCeeEEec
Confidence            99999999999999999999999999987543

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=2e-34  Score=236.53  Aligned_cols=193  Identities=22%  Similarity=0.313  Sum_probs=156.7

Q ss_pred             eEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCC
Q 025124           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ  101 (257)
Q Consensus        22 ~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  101 (257)
                      +.++.+|++|+++++++++++.++++++|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++   
T Consensus        48 ~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~---  124 (250)
T 2fwm_X           48 FATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR---  124 (250)
T ss_dssp             SEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---
T ss_pred             ceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC---
Confidence            45678999999999999999999999999999999988778889999999999999999999999999999998876   


Q ss_pred             CCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHHH-Hh
Q 025124          102 ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS-KA  180 (257)
Q Consensus       102 ~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~-~~  180 (257)
                           .|+||++||..+..+.++...|+++|+++++|+++++.|+. ++||++++|+||+++|++............ .+
T Consensus       125 -----~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~  198 (250)
T 2fwm_X          125 -----GGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELA-GSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRI  198 (250)
T ss_dssp             -----CCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCC-------------------
T ss_pred             -----CCEEEEECchhhCCCCCCCchHHHHHHHHHHHHHHHHHHhC-ccCCEEEEEECCcccCccccccccChhHHHHHH
Confidence                 68999999999999999999999999999999999999999 899999999999999987543211111111 22


Q ss_pred             hh-------hccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          181 TD-------YMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       181 ~~-------~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ..       ..|.+++.+|+|+|+.+++|+++.+.+++|+.+.+|||..+
T Consensus       199 ~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~  248 (250)
T 2fwm_X          199 RGFGEQFKLGIPLGKIARPQEIANTILFLASDLASHITLQDIVVDGGSTL  248 (250)
T ss_dssp             -----------------CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             hhhhhcccccCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCccc
Confidence            22       45677889999999999999999889999999999999754

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=8.2e-34  Score=233.89  Aligned_cols=213  Identities=26%  Similarity=0.316  Sum_probs=187.3

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHHHh
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~   80 (257)
                      +|+.++++++.+++.+.+.++.++.+|++|+++++++++++.++++++|+||||||... ..++.+.+.++|+..+++|+
T Consensus        44 ~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~  123 (260)
T 3awd_A           44 DLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINL  123 (260)
T ss_dssp             ESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHT
T ss_pred             eCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhcc
Confidence            68888888888888887888999999999999999999999999999999999999876 67788899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccc--hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ--IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~--~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      .+++.+++++++.|.+++        .++||++||..+..+.++.  ..|+++|++++.|+++++.|+. ++||++++|+
T Consensus       124 ~~~~~~~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~-~~gi~v~~v~  194 (260)
T 3awd_A          124 NGMFRSCQAVGRIMLEQK--------QGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWA-PHGIRANAVA  194 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCSSSCCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEE
T ss_pred             HHHHHHHHHHHHHHhhcC--------CCEEEEEecchhcccCCCCCccccHHHHHHHHHHHHHHHHHhh-hcCeEEEEEE
Confidence            999999999999998866        6899999999988877766  8999999999999999999998 8899999999


Q ss_pred             cCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       159 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ||++.|++.............+....+.+++.+|+|+|+.+++++++.+.+++|+.+.+|||..+
T Consensus       195 pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~  259 (260)
T 3awd_A          195 PTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLASDAASLMTGAIVNVDAGFTV  259 (260)
T ss_dssp             ECCBCCTTTHHHHTCHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             eeeeccchhhcccCChHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCchhccCCCcEEEECCceec
Confidence            99999987531111123334444556778899999999999999998888899999999999653

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=2.1e-34  Score=234.87  Aligned_cols=192  Identities=29%  Similarity=0.401  Sum_probs=169.8

Q ss_pred             eEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCC
Q 025124           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ  101 (257)
Q Consensus        22 ~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  101 (257)
                      +.++.+|+++ ++++++++++.+.++++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|.|++++   
T Consensus        45 ~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~---  120 (239)
T 2ekp_A           45 AVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG---  120 (239)
T ss_dssp             CEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---
T ss_pred             cEEEecCCch-HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC---
Confidence            7788999999 999999999999999999999999987778888999999999999999999999999999999876   


Q ss_pred             CCCCCCceEEEEccccccccc--ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHHHH
Q 025124          102 ASSSSGGIIINISATLHYTAT--WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK  179 (257)
Q Consensus       102 ~~~~~~g~ii~iss~~~~~~~--~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~  179 (257)
                           .|+||++||..+..+.  ++...|+++|+++++|+++++.|+. ++||++++|+||++.|++.......++....
T Consensus       121 -----~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~  194 (239)
T 2ekp_A          121 -----WGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWA-RLGIRVNLLCPGYVETEFTLPLRQNPELYEP  194 (239)
T ss_dssp             -----CEEEEEECCGGGTSCCTTSCCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSGGGHHHHTCHHHHHH
T ss_pred             -----CcEEEEECchhhccCCCCCCCccHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEEeCCccCchhhccccCHHHHHH
Confidence                 6899999999998877  7889999999999999999999999 8999999999999999864321111223333


Q ss_pred             hhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          180 ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       180 ~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      .....+.+++.+|+|+|+.+++|+++.+.+++|+.+.+|||...
T Consensus       195 ~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~~~  238 (239)
T 2ekp_A          195 ITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQAVAVDGGFLA  238 (239)
T ss_dssp             HHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             HHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCEEEECCCccc
Confidence            44556778899999999999999998889999999999999653

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=3.4e-34  Score=236.53  Aligned_cols=204  Identities=29%  Similarity=0.372  Sum_probs=180.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.+++..   ++.++.+|++|+++++++++++.+++|++|++|||||+....++.+.+.++|++.+++|+.
T Consensus        38 ~r~~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~  114 (260)
T 1nff_A           38 DILDEEGKAMAAELAD---AARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLT  114 (260)
T ss_dssp             ESCHHHHHHHHHHTGG---GEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTH
T ss_pred             eCCHHHHHHHHHHhhc---CceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhH
Confidence            6888888877766643   4888999999999999999999999999999999999887778889999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.++++++|.|++++        .|+||++||..+..+.++...|+++|+++++|+++++.|+. ++||++++|+||+
T Consensus       115 g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~  185 (260)
T 1nff_A          115 GVFLGIRAVVKPMKEAG--------RGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELG-PSGIRVNSIHPGL  185 (260)
T ss_dssp             HHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECC
T ss_pred             HHHHHHHHHHHHHHhcC--------CCEEEEEeehhhcCCCCCchhHHHHHHHHHHHHHHHHHHhC-ccCcEEEEEEeCC
Confidence            99999999999999876        68999999999999988999999999999999999999998 8899999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      +.|++..  ....    .+. ..+.+++.+|+|+|+.+++|+++.+.+++|+.+.+|||..+.
T Consensus       186 v~t~~~~--~~~~----~~~-~~~~~~~~~~~dvA~~v~~l~s~~~~~~~G~~~~v~gG~~~~  241 (260)
T 1nff_A          186 VKTPMTD--WVPE----DIF-QTALGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGGTVAG  241 (260)
T ss_dssp             BCSGGGT--TSCT----TCS-CCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred             CCCCccc--cchh----hHH-hCccCCCCCHHHHHHHHHHHhCccccCCcCCEEEECCCeecc
Confidence            9998753  1111    111 346678899999999999999988889999999999997664

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=7.4e-34  Score=237.50  Aligned_cols=210  Identities=29%  Similarity=0.383  Sum_probs=185.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|++++++++.+++.+.+.++.++.+|++|.++++++++++.++++++|+||||||.....++.+.+.++|+..+++|+.
T Consensus        75 ~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~  154 (285)
T 2c07_A           75 SRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLN  154 (285)
T ss_dssp             ESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTT
T ss_pred             cCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhH
Confidence            57888899998888877788999999999999999999999999999999999999887788889999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.+++.+++.|.+++        .++||++||..+..+.++...|+++|++++.|+++++.|+. +.||++++|+||+
T Consensus       155 g~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~  225 (285)
T 2c07_A          155 SLFYITQPISKRMINNR--------YGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELA-SRNITVNAIAPGF  225 (285)
T ss_dssp             HHHHHHHHHHHHHHHHT--------CEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECS
T ss_pred             HHHHHHHHHHHHHHhCC--------CCEEEEECChhhccCCCCCchHHHHHHHHHHHHHHHHHHHH-HhCcEEEEEEeCc
Confidence            99999999999998765        68999999999998888999999999999999999999998 8899999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      +.|++... . ............+.+++.+|+|+|+++++++++.+.+++|+.+.+|||..
T Consensus       226 v~t~~~~~-~-~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~G~~i~v~gG~~  284 (285)
T 2c07_A          226 ISSDMTDK-I-SEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGGLS  284 (285)
T ss_dssp             BCC------C-CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred             EecCchhh-c-CHHHHHHHHhhCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCEEEeCCCcc
Confidence            99987543 2 23333444455677889999999999999999888899999999999964

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=7.1e-35  Score=240.17  Aligned_cols=201  Identities=24%  Similarity=0.314  Sum_probs=165.6

Q ss_pred             cCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCC----CCCCCCHHHHHHHHHHHhHHHHHHHHHHHHH
Q 025124           18 LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV----PAEDLSPNGFRTVIEIDSVGTFIMCHEALKY   93 (257)
Q Consensus        18 ~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   93 (257)
                      .+.++.++.+|++|+++++++++.+.+ ++++|++|||||+....    +..+.+.++|++++++|+.+++.++++++|+
T Consensus        50 ~~~~~~~~~~D~~~~~~v~~~~~~~~~-~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  128 (257)
T 3tl3_A           50 LGDRARFAAADVTDEAAVASALDLAET-MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAER  128 (257)
T ss_dssp             TCTTEEEEECCTTCHHHHHHHHHHHHH-HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCceEEEECCCCCHHHHHHHHHHHHH-hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHH
Confidence            366899999999999999999998877 99999999999976432    2345899999999999999999999999999


Q ss_pred             HHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCCh
Q 025124           94 LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP  173 (257)
Q Consensus        94 ~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~  173 (257)
                      |.+...........|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||+++|++....  .
T Consensus       129 ~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~--~  205 (257)
T 3tl3_A          129 IAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLA-SHRIRVMTIAPGLFDTPLLASL--P  205 (257)
T ss_dssp             HTTSCCC--CCCCSEEEEEECCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCTTC-----C
T ss_pred             HHHhcccccccCCCcEEEEEcchhhcCCCCCCccHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEEecCccChhhhhc--c
Confidence            987321100111278999999999999999999999999999999999999999 8999999999999999876442  2


Q ss_pred             HHHHHHhhhhccC-CCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          174 EEIRSKATDYMAA-YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       174 ~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      ++.........+. +++.+|+|+|+.+++|+++  .+++|+.+.+|||+.+.
T Consensus       206 ~~~~~~~~~~~~~~~r~~~p~dva~~v~~l~s~--~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          206 EEARASLGKQVPHPSRLGNPDEYGALAVHIIEN--PMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             HHHHHHHHHTSSSSCSCBCHHHHHHHHHHHHHC--TTCCSCEEEESTTC---
T ss_pred             HHHHHHHHhcCCCCCCccCHHHHHHHHHHHhcC--CCCCCCEEEECCCccCC
Confidence            4445555566676 8899999999999999986  78999999999998765

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.7e-34  Score=239.54  Aligned_cols=208  Identities=30%  Similarity=0.438  Sum_probs=177.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHHHh
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~   80 (257)
                      +|++++++++.+++.    ++.++.+|++|+++++++++++.+++|++|++|||||... ..++.+.+.++|++.+++|+
T Consensus        40 ~r~~~~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~  115 (270)
T 1yde_A           40 DKDESGGRALEQELP----GAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNL  115 (270)
T ss_dssp             ESCHHHHHHHHHHCT----TEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             eCCHHHHHHHHHHhc----CCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHh
Confidence            578877777665542    4788999999999999999999999999999999999765 36788899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .+++.++++++|+|.++         .|+||++||..+..+.++...|+++|+++++|+++++.|+. ++||++|+|+||
T Consensus       116 ~g~~~l~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~Pg  185 (270)
T 1yde_A          116 LGTYTLTKLALPYLRKS---------QGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDES-PYGVRVNCISPG  185 (270)
T ss_dssp             HHHHHHHHHHHHHHHHH---------TCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHC---------CCEEEEEcCccccCCCCCCcccHHHHHHHHHHHHHHHHHhh-hhCcEEEEEEeC
Confidence            99999999999999865         58999999999988888999999999999999999999999 899999999999


Q ss_pred             cccCCCCCCC---C-ChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          161 PIKDTAGVSK---L-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       161 ~v~t~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      ++.|++....   . .............|++++.+|+|+|+.++||+++ +++++|+.+.+|||..+.
T Consensus       186 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~-~~~itG~~i~vdGG~~~~  252 (270)
T 1yde_A          186 NIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANFCTGIELLVTGGAELG  252 (270)
T ss_dssp             SBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHH-CTTCCSCEEEESTTTTSC
T ss_pred             ccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHHHHHHHHHHHccc-CCCcCCCEEEECCCeecc
Confidence            9999864211   0 1111112223446788899999999999999997 789999999999997664

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=5.7e-34  Score=232.67  Aligned_cols=210  Identities=26%  Similarity=0.351  Sum_probs=186.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.+++.+.+.++.++.+|++|+++++++++++.++++++|++|||||.....++.+.+.++|++.+++|+.
T Consensus        33 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~  112 (244)
T 1edo_A           33 ARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLT  112 (244)
T ss_dssp             SSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTH
T ss_pred             CCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhH
Confidence            68888898888888877778999999999999999999999999999999999999887778888999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      ++++++++++++|.+++        .++||++||..+..+.++...|+++|+++++|+++++.|+. ++||++++|+||+
T Consensus       113 ~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~  183 (244)
T 1edo_A          113 GVFLCTQAATKIMMKKR--------KGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGA-SRNINVNVVCPGF  183 (244)
T ss_dssp             HHHHHHHHHHHHHHHHT--------CEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHH-TTTEEEEEEEECS
T ss_pred             HHHHHHHHHHHHHHhcC--------CCEEEEECChhhcCCCCCCccchhhHHHHHHHHHHHHHHhh-hcCCEEEEEeeCc
Confidence            99999999999998866        68999999999988888999999999999999999999998 8899999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhc-cCCCCcccCcEEEecCCcc
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA-SDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-~~~~~~~~G~~~~~dgg~~  222 (257)
                      +.|++....  ............+.+++.+|+|+|+.+++++ ++.+.+++|+.+.+|||..
T Consensus       184 v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gG~~  243 (244)
T 1edo_A          184 IASDMTAKL--GEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTIDGGIA  243 (244)
T ss_dssp             BCSHHHHTT--CHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTTTT
T ss_pred             cccchhhhc--ChHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCccCCcCCCEEEeCCCcc
Confidence            998865332  2233334445567788899999999999999 6677889999999999965

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=6e-34  Score=233.31  Aligned_cols=204  Identities=25%  Similarity=0.314  Sum_probs=168.7

Q ss_pred             HHHHHHHHhcCCCeEE-------------EEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHH
Q 025124            9 RSAVAALHSLGIPAIG-------------LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV   75 (257)
Q Consensus         9 ~~~~~~l~~~~~~~~~-------------~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~   75 (257)
                      ..++..|.+.|.++..             +.+|++|+++++++++++.++++++|++|||||+....++.+.+.++|+.+
T Consensus        29 ~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~  108 (247)
T 1uzm_A           29 LAIAQRLAADGHKVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKV  108 (247)
T ss_dssp             HHHHHHHHHTTCEEEEEESSSCCCTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHH
T ss_pred             HHHHHHHHHCCCEEEEEeCChHHHHHhcCeeccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHH
Confidence            3455666666554432             689999999999999999999999999999999887778889999999999


Q ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEE
Q 025124           76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN  155 (257)
Q Consensus        76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~  155 (257)
                      +++|+.+++.++++++|.|++++        .|+||++||..+..+.++...|+++|+++++|+++++.|+. ++||+++
T Consensus       109 ~~~N~~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~  179 (247)
T 1uzm_A          109 INANLTGAFRVAQRASRSMQRNK--------FGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELS-KANVTAN  179 (247)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHTT--------CEEEEEECCCCC-----CCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEE
T ss_pred             HHHHhHHHHHHHHHHHHHHHhCC--------CCEEEEECCHhhccCCCCChhHHHHHHHHHHHHHHHHHHhh-hcCcEEE
Confidence            99999999999999999999875        69999999999998888999999999999999999999999 8899999


Q ss_pred             EEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          156 GIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       156 ~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +|+||+++|++... . ............+.+++.+|+|+|+.+++|+++.+.+++|+.+.+|||..+
T Consensus       180 ~v~PG~v~t~~~~~-~-~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~i~vdgG~~~  245 (247)
T 1uzm_A          180 VVAPGYIDTDMTRA-L-DERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGMGM  245 (247)
T ss_dssp             EEEECSBCCHHHHH-S-CHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             EEEeCCCcccchhh-c-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCCcCCEEEECCCccc
Confidence            99999999886432 1 123333444556778899999999999999998889999999999999764

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=4.4e-34  Score=236.38  Aligned_cols=213  Identities=25%  Similarity=0.371  Sum_probs=162.5

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHh-CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      +|+.++++++.+++.+.+.++.++.+|+++.++++.+++++.+.+ +++|+||||||.....++.+.+.++|+..+++|+
T Consensus        45 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~  124 (266)
T 1xq1_A           45 ARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNL  124 (266)
T ss_dssp             ESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHH
T ss_pred             eCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhh
Confidence            688888999988888877889999999999999999999999999 8999999999987777888899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .++++++++++|.|++++        .++||++||..+..+.++...|+++|++++.|+++++.|+. ++||++++|+||
T Consensus       125 ~g~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg  195 (266)
T 1xq1_A          125 ESAYHLSQLAHPLLKASG--------CGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWA-SDGIRANAVAPA  195 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHS--------SCEEEEEC----------CCHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEECC
T ss_pred             HHHHHHHHHHHHHHHhcC--------CcEEEEEccchhccCCCCCchHHHHHHHHHHHHHHHHHHHh-HhCcEEEEEeeC
Confidence            999999999999998876        68999999999988888889999999999999999999998 889999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      ++.|++..... ............+.+++.+|+|+|+.+++|+++.+.+++|+.+.+|||..+.
T Consensus       196 ~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~~  258 (266)
T 1xq1_A          196 VIATPLAEAVY-DDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITGQTICVDGGLTVN  258 (266)
T ss_dssp             SCC--------------------------CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCEEET
T ss_pred             CCccchhhhhc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCcEEEEcCCcccc
Confidence            99998754322 1222223334456678899999999999999988889999999999997654

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=1.8e-33  Score=230.45  Aligned_cols=200  Identities=25%  Similarity=0.268  Sum_probs=174.7

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.+++.+.+.++.++.+|++|+++++++++++.++++++|+||||||+....++.+.+.++|++++++|+.
T Consensus        38 ~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~  117 (247)
T 2jah_A           38 ARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLL  117 (247)
T ss_dssp             ESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTH
T ss_pred             ECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhH
Confidence            68899999999999887788999999999999999999999999999999999999887788899999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      |+++++++++|+|.++         +|+||++||..+..+.++...|+++|+++++|+++++.|+. ++||+||+|+||+
T Consensus       118 g~~~~~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~  187 (247)
T 2jah_A          118 GLMYMTRAALPHLLRS---------KGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVT-ERGVRVVVIEPGT  187 (247)
T ss_dssp             HHHHHHHHHHHHHHHH---------TCEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECS
T ss_pred             HHHHHHHHHHHHHHHC---------CCEEEEEccHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEECCC
Confidence            9999999999999875         48899999999999999999999999999999999999999 8999999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCC--CCHHhHHHHHHHhccCCCCcccCcE
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKF--GEKWDIAMAALYLASDAGKYVNGNT  214 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~dva~~~~~l~~~~~~~~~G~~  214 (257)
                      ++|++...... ......+ ...+ +++  .+|+|+|+.+++++++.+.+.++..
T Consensus       188 v~T~~~~~~~~-~~~~~~~-~~~~-~~~~~~~pedvA~~v~~l~s~~~~~~~~~i  239 (247)
T 2jah_A          188 TDTELRGHITH-TATKEMY-EQRI-SQIRKLQAQDIAEAVRYAVTAPHHATVHEI  239 (247)
T ss_dssp             BSSSGGGGCCC-HHHHHHH-HHHT-TTSCCBCHHHHHHHHHHHHHSCTTEEEEEE
T ss_pred             CCCcchhcccc-hhhHHHH-Hhcc-cccCCCCHHHHHHHHHHHhCCCccCccceE
Confidence            99987543222 2211111 2223 445  8999999999999998877777654

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=7.4e-34  Score=234.35  Aligned_cols=215  Identities=33%  Similarity=0.489  Sum_probs=186.8

Q ss_pred             CC-cHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            2 GR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r-~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      +| +.++++++.+++.+.+.++.++.+|++|+++++++++++.++++++|+||||||.....++.+.+.++|+..+++|+
T Consensus        38 ~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~  117 (261)
T 1gee_A           38 YRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNL  117 (261)
T ss_dssp             ESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             cCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhh
Confidence            56 78888888888887777899999999999999999999999999999999999987777788899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .+++.+++++++.|.+++.       .++||++||..+..+.++...|+++|++++.|+++++.|+. ++||++++|+||
T Consensus       118 ~~~~~l~~~~~~~~~~~~~-------~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg  189 (261)
T 1gee_A          118 TGAFLGSREAIKYFVENDI-------KGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYA-PKGIRVNNIGPG  189 (261)
T ss_dssp             HHHHHHHHHHHHHHHHTTC-------CCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHhCCC-------CCEEEEeCCHHhcCCCCCccHHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeeC
Confidence            9999999999999987531       47999999999998989999999999999999999999998 889999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      ++.|++..................+.+++.+|+|+|+.+++|+++.+.+++|+.+.+|||..+.
T Consensus       190 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~  253 (261)
T 1gee_A          190 AINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMTLY  253 (261)
T ss_dssp             SBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             CcCCchhhhcccChhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCcEEEEcCCcccC
Confidence            9999865321101222233334456778899999999999999988889999999999997654

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=6.4e-35  Score=242.02  Aligned_cols=208  Identities=24%  Similarity=0.227  Sum_probs=173.8

Q ss_pred             CCcHHH-HHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC---CccEEEeCCCCCC-----CCCCCCCCHHHH
Q 025124            2 GRRKTV-LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG---KLDILVNAAAGNF-----LVPAEDLSPNGF   72 (257)
Q Consensus         2 ~r~~~~-l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g---~id~li~~ag~~~-----~~~~~~~~~~~~   72 (257)
                      +|+.++ ++++.++   .+.++.++.+|++|+++++++++++.+++|   ++|+||||||+..     ..++.+.+.++|
T Consensus        40 ~r~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~  116 (269)
T 2h7i_A           40 GFDRLRLIQRITDR---LPAKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADV  116 (269)
T ss_dssp             ECSCHHHHHHHHTT---SSSCCCEEECCTTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHH
T ss_pred             ecChHHHHHHHHHh---cCCCceEEEccCCCHHHHHHHHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHH
Confidence            455544 3444332   255788999999999999999999999999   9999999999765     467788999999


Q ss_pred             HHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCe
Q 025124           73 RTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAI  152 (257)
Q Consensus        73 ~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi  152 (257)
                      ++.+++|+.+++.++++++|+|.+          .|+||++||... .+.+.+..|+++|+++++|+++++.|+. ++||
T Consensus       117 ~~~~~~N~~g~~~l~~~~~~~~~~----------~g~iv~iss~~~-~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gi  184 (269)
T 2h7i_A          117 SKGIHISAYSYASMAKALLPIMNP----------GGSIVGMDFDPS-RAMPAYNWMTVAKSALESVNRFVAREAG-KYGV  184 (269)
T ss_dssp             HHHHHHHTHHHHHHHHHHGGGEEE----------EEEEEEEECCCS-SCCTTTHHHHHHHHHHHHHHHHHHHHHH-TTTC
T ss_pred             HHHHHHhhHHHHHHHHHHHHhhcc----------CCeEEEEcCccc-cccCchHHHHHHHHHHHHHHHHHHHHhc-ccCc
Confidence            999999999999999999999865          478999999876 6777889999999999999999999999 8999


Q ss_pred             EEEEEecCcccCCCCCCC---CChHH-------HHHHhhhhccCC-CCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          153 RVNGIAPGPIKDTAGVSK---LAPEE-------IRSKATDYMAAY-KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       153 ~v~~v~Pg~v~t~~~~~~---~~~~~-------~~~~~~~~~~~~-~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                      +||+|+||+++|++....   ...+.       ..+.+....|++ ++.+|+|+|+.++||+++.+++++|+.+.+|||+
T Consensus       185 ~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  264 (269)
T 2h7i_A          185 RSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGA  264 (269)
T ss_dssp             EEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTG
T ss_pred             EEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCcccCCCCHHHHHHHHHHHhCchhccCcceEEEecCCe
Confidence            999999999999864221   00111       122334556788 6999999999999999999999999999999997


Q ss_pred             ccC
Q 025124          222 WLS  224 (257)
Q Consensus       222 ~~~  224 (257)
                      .+.
T Consensus       265 ~~~  267 (269)
T 2h7i_A          265 HTQ  267 (269)
T ss_dssp             GGC
T ss_pred             eee
Confidence            654

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=5e-34  Score=236.24  Aligned_cols=193  Identities=18%  Similarity=0.157  Sum_probs=171.2

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      ++.++.+|++|.++++++++++.+++|++|+||||||+....++.+.+.++|++++++|+.|+++++++++|.|++++  
T Consensus        60 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~--  137 (266)
T 3p19_A           60 NTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARN--  137 (266)
T ss_dssp             TEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--
T ss_pred             CceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--
Confidence            678899999999999999999999999999999999988888899999999999999999999999999999999876  


Q ss_pred             CCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHHHHh
Q 025124          101 QASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA  180 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~  180 (257)
                            .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||+++|++....... .....+
T Consensus       138 ------~g~IV~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~-~~~~~~  209 (266)
T 3p19_A          138 ------CGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVA-ASNVRVMTIAPSAVKTELLSHTTSQ-QIKDGY  209 (266)
T ss_dssp             ------CCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBSSSGGGGCSCH-HHHHHH
T ss_pred             ------CcEEEEEcChhhCCCCCCCchHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEeeCccccchhhcccch-hhhHHH
Confidence                  79999999999999999999999999999999999999999 8999999999999999986544332 222222


Q ss_pred             hh-hccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          181 TD-YMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       181 ~~-~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      .. ..+++++.+|+|+|++++||++.+.....++.+....+...
T Consensus       210 ~~~~~~~~r~~~pedvA~av~~l~~~~~~~~~~~i~i~p~~~~~  253 (266)
T 3p19_A          210 DAWRVDMGGVLAADDVARAVLFAYQQPQNVCIREIALAPTKQQP  253 (266)
T ss_dssp             HHHHHHTTCCBCHHHHHHHHHHHHHSCTTEEEEEEEEEETTCCC
T ss_pred             HhhcccccCCCCHHHHHHHHHHHHcCCCCccceeeEEecCCCCC
Confidence            22 34778899999999999999999888888888777766543

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=9.9e-34  Score=233.72  Aligned_cols=188  Identities=29%  Similarity=0.462  Sum_probs=167.6

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      ++.++.+|++|+++++++++++.+++|++|++|||||+....++.+.+.++|++.+++|+.|++.++++++|.|++++  
T Consensus        69 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~--  146 (260)
T 3un1_A           69 DIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQG--  146 (260)
T ss_dssp             TEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--
T ss_pred             ceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--
Confidence            466789999999999999999999999999999999988888889999999999999999999999999999999876  


Q ss_pred             CCCCCCCceEEEEcccccccc--cccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHHH
Q 025124          101 QASSSSGGIIINISATLHYTA--TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS  178 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~~--~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~  178 (257)
                            .|+||++||..+..+  ..+...|+++|+|+++|+++++.|+. ++||+||+|+||+++|++...     ....
T Consensus       147 ------~g~iv~isS~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~t~~~~~-----~~~~  214 (260)
T 3un1_A          147 ------SGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAMEFS-RSGVRVNAVSPGVIKTPMHPA-----ETHS  214 (260)
T ss_dssp             ------CEEEEEECCTTTTSCBTTCCCHHHHHHHHHHHHHHHHHHHHTT-TTTEEEEEEEECCBCCTTSCG-----GGHH
T ss_pred             ------CcEEEEEechhhccCCCCCccHHHHHHHHHHHHHHHHHHHHhC-cCCeEEEEEeecCCCCCCCCH-----HHHH
Confidence                  799999999877643  34568999999999999999999999 899999999999999997532     2334


Q ss_pred             HhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          179 KATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       179 ~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      ......|.+++.+|+|+|+++++|  ..+.+++|+++.+|||..+.
T Consensus       215 ~~~~~~p~~r~~~~~dva~av~~L--~~~~~itG~~i~vdGG~~~~  258 (260)
T 3un1_A          215 TLAGLHPVGRMGEIRDVVDAVLYL--EHAGFITGEILHVDGGQNAG  258 (260)
T ss_dssp             HHHTTSTTSSCBCHHHHHHHHHHH--HHCTTCCSCEEEESTTGGGC
T ss_pred             HHhccCCCCCCcCHHHHHHHHHHh--cccCCCCCcEEEECCCeecc
Confidence            455667889999999999999999  45678999999999998764

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=9.1e-34  Score=232.35  Aligned_cols=204  Identities=29%  Similarity=0.343  Sum_probs=164.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.+++.   .++.++.+|+++.+++++++++    ++++|++|||||+....++.+.+.++|+.++++|+.
T Consensus        45 ~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~----~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~  117 (249)
T 3f9i_A           45 GSNEEKLKSLGNALK---DNYTIEVCNLANKEECSNLISK----TSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLK  117 (249)
T ss_dssp             ESCHHHHHHHHHHHC---SSEEEEECCTTSHHHHHHHHHT----CSCCSEEEECCC-------------CHHHHHHHHTH
T ss_pred             cCCHHHHHHHHHHhc---cCccEEEcCCCCHHHHHHHHHh----cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHH
Confidence            688888888777663   4788999999999998887764    478999999999887777888899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.++++++|.|.++.        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||++++|+||+
T Consensus       118 ~~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~  188 (249)
T 3f9i_A          118 ANFILNREAIKKMIQKR--------YGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVA-TRGITVNAVAPGF  188 (249)
T ss_dssp             HHHHHHHHHHHHHHHHT--------CEEEEEECCCCC--CCSCSHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECC
T ss_pred             HHHHHHHHHHHHHHhCC--------CcEEEEEccHHhccCCCCCchhHHHHHHHHHHHHHHHHHHH-HcCcEEEEEecCc
Confidence            99999999999999876        79999999999999999999999999999999999999999 8899999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +.|++....  ............+.+++.+|+|+|+++++|+++.+.+++|+.+.+|||+.+
T Consensus       189 v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~~~  248 (249)
T 3f9i_A          189 IKSDMTDKL--NEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASYITGQTLHVNGGMLM  248 (249)
T ss_dssp             BC------C--CHHHHHHHHHHCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             cccCccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCCEee
Confidence            999875432  344555666777889999999999999999999999999999999999865

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=6e-34  Score=234.25  Aligned_cols=206  Identities=17%  Similarity=0.254  Sum_probs=177.4

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC-CCCCCCCCCHHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n   79 (257)
                      ++|+.++++++.+ +.+.+.++..+     |.++++++++++.++++++|+||||||+. ...++.+.+.++|++++++|
T Consensus        31 ~~r~~~~~~~~~~-l~~~~~~~~~~-----d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N  104 (254)
T 1zmt_A           31 HDESFKQKDELEA-FAETYPQLKPM-----SEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEAL  104 (254)
T ss_dssp             CCGGGGSHHHHHH-HHHHCTTSEEC-----CCCSHHHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHH
T ss_pred             EeCCHHHHHHHHH-HHhcCCcEEEE-----CHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHH
Confidence            4678777777766 66666666554     67788899999999999999999999987 66788899999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.+++.++++++|+|++++        .|+||++||..+..+.++...|+++|+++++|+++++.|+. ++||+||+|+|
T Consensus       105 ~~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~P  175 (254)
T 1zmt_A          105 QIRPFALVNAVASQMKKRK--------SGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELG-EYNIPVFAIGP  175 (254)
T ss_dssp             THHHHHHHHHHHHHHHHHT--------CCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCCEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHcC--------CcEEEEECCcccccCCCCchHHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEec
Confidence            9999999999999998876        68999999999999999999999999999999999999999 89999999999


Q ss_pred             Ccc---------cCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          160 GPI---------KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       160 g~v---------~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      |++         +|++...   ..+....+....+.+++.+|+|+|+.+++|+++.+.+++|+.+.+|||....
T Consensus       176 G~v~~~~~~~~~~T~~~~~---~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~~  246 (254)
T 1zmt_A          176 NYLHSEDSPYFYPTEPWKT---NPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQVFWLAGGFPMI  246 (254)
T ss_dssp             SSBCCBTCCSSCBHHHHTT---CHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTTCCCC
T ss_pred             CccccccccccCCCccccc---ChHHHHHHhccCCCCCCcCHHHHHHHHHHHhCcccCCccCCEEEECCCchhh
Confidence            999         6654322   1223333445567888999999999999999998899999999999997653

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=6.3e-34  Score=233.95  Aligned_cols=192  Identities=23%  Similarity=0.327  Sum_probs=164.2

Q ss_pred             eEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCC
Q 025124           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ  101 (257)
Q Consensus        22 ~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  101 (257)
                      +.++.+|++|+++++++++++.++++++|+||||||+....++.+.+.++|+..+++|+.+++.++++++|.|++++   
T Consensus        61 ~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~---  137 (253)
T 2nm0_A           61 FLAVKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAK---  137 (253)
T ss_dssp             SEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             ceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---
Confidence            45678999999999999999999999999999999988777888899999999999999999999999999999876   


Q ss_pred             CCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHHHHhh
Q 025124          102 ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT  181 (257)
Q Consensus       102 ~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~  181 (257)
                           .|+||++||..+..+.++...|+++|+++++|+++++.|+. +.||++++|+||+++|++....  .......+.
T Consensus       138 -----~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~  209 (253)
T 2nm0_A          138 -----KGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELG-SRNITFNVVAPGFVDTDMTKVL--TDEQRANIV  209 (253)
T ss_dssp             -----CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC-SSSEEEEEEEECSBCC-----------CHHHHH
T ss_pred             -----CCEEEEECchhhCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEeCcCcCcchhhc--CHHHHHHHH
Confidence                 78999999999988888889999999999999999999999 8999999999999999875321  111222333


Q ss_pred             hhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          182 DYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       182 ~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      ...+.+++.+|+|+|+.+++|+++.+.+++|+.+.+|||..+.
T Consensus       210 ~~~p~~~~~~p~dvA~~i~~l~s~~~~~~tG~~i~vdGG~~~~  252 (253)
T 2nm0_A          210 SQVPLGRYARPEEIAATVRFLASDDASYITGAVIPVDGGLGMG  252 (253)
T ss_dssp             TTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTCC
T ss_pred             hcCCCCCCcCHHHHHHHHHHHhCccccCCcCcEEEECCccccC
Confidence            4567788999999999999999998899999999999997653

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=8.3e-34  Score=234.71  Aligned_cols=200  Identities=23%  Similarity=0.340  Sum_probs=174.8

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      ++.++.+|++|.++++++++++.+++|++|+||||||+....++.+.+.++|++.+++|+.+++.++++++|.|++++  
T Consensus        47 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--  124 (264)
T 2dtx_A           47 KYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSR--  124 (264)
T ss_dssp             SSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS--
T ss_pred             ceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--
Confidence            466789999999999999999999999999999999988778889999999999999999999999999999998765  


Q ss_pred             CCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCC-----ChH-
Q 025124          101 QASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-----APE-  174 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~-----~~~-  174 (257)
                            .|+||++||..+..+.++...|+++|+++++|+++++.|+. +. |++|+|+||+++|++.....     ... 
T Consensus       125 ------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~  196 (264)
T 2dtx_A          125 ------DPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYA-PL-LRCNAVCPATIDTPLVRKAAELEVGSDPM  196 (264)
T ss_dssp             ------SCEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHT-TT-SEEEEEEECSBCSHHHHHHHHHHHCSCHH
T ss_pred             ------CcEEEEECCchhccCCCCchhHHHHHHHHHHHHHHHHHHhc-CC-cEEEEEEeCCCcCcchhhhhhcccccCch
Confidence                  68999999999999999999999999999999999999998 77 99999999999988642210     011 


Q ss_pred             ---HHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCc
Q 025124          175 ---EIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLP  230 (257)
Q Consensus       175 ---~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~  230 (257)
                         +....+....+.+++.+|+|+|+.+++|+++.+.+++|+.+.+|||..+..|...+
T Consensus       197 ~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~~~p~~~~  255 (264)
T 2dtx_A          197 RIEKKISEWGHEHPMQRIGKPQEVASAVAFLASREASFITGTCLYVDGGLSIRAPISTP  255 (264)
T ss_dssp             HHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCCCCCC
T ss_pred             hhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCcccCCCCCCc
Confidence               22233344567788999999999999999988899999999999998887765543

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=2.1e-33  Score=232.05  Aligned_cols=201  Identities=21%  Similarity=0.220  Sum_probs=174.6

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCC-CCCCCCCCCCHHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG-NFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      ++|+.++++++.+++.+.+.++.++.+|++|.++++.+++++.+.+|++|+||||||+ ....++.+.+.++|+..+++|
T Consensus        59 ~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN  138 (262)
T 3rkr_A           59 TARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVN  138 (262)
T ss_dssp             EESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHH
Confidence            3689999999999999888899999999999999999999999999999999999997 456788899999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.|++.++++++|.|.+++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||++++|+|
T Consensus       139 ~~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~v~~v~P  209 (262)
T 3rkr_A          139 LKAPYLLLRAFAPAMIAAK--------RGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELR-QHQVRVSLVAP  209 (262)
T ss_dssp             THHHHHHHHHHHHHHHHTT--------CCEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHhCC--------CceEEEEechhhcCCCCCCchHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEec
Confidence            9999999999999999876        79999999999999999999999999999999999999999 89999999999


Q ss_pred             CcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCC
Q 025124          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG  220 (257)
Q Consensus       160 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg  220 (257)
                      |+++|++.....          ...+..++.+|+|+|+.+++|+++...+++|+.+..+.+
T Consensus       210 G~v~t~~~~~~~----------~~~~~~~~~~p~dvA~~v~~l~s~~~~~~~g~~~i~p~~  260 (262)
T 3rkr_A          210 GSVRTEFGVGLS----------AKKSALGAIEPDDIADVVALLATQADQSFISEVLVRPTL  260 (262)
T ss_dssp             CCC--------------------------CCCHHHHHHHHHHHHTCCTTCCEEEEEEECCC
T ss_pred             CCCcCCcccccc----------cccccccCCCHHHHHHHHHHHhcCccccccCcEEecccc
Confidence            999998653221          122345678999999999999999999999999888765

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.6e-34  Score=234.49  Aligned_cols=204  Identities=26%  Similarity=0.316  Sum_probs=171.7

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|++++++++. ++    .++.++.+|++|+++++    ++.++++++|++|||||.....++.+.+.++|+..+++|+.
T Consensus        37 ~r~~~~~~~~~-~~----~~~~~~~~D~~~~~~~~----~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~  107 (246)
T 2ag5_A           37 DINESKLQELE-KY----PGIQTRVLDVTKKKQID----QFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVR  107 (246)
T ss_dssp             ESCHHHHGGGG-GS----TTEEEEECCTTCHHHHH----HHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTH
T ss_pred             ECCHHHHHHHH-hc----cCceEEEeeCCCHHHHH----HHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHH
Confidence            56766665543 22    26888999999999988    44556789999999999877778888999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccc-cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~-~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      +++.++++++|+|++++        .|+||++||..+..+.+ +...|+++|+++++|+++++.|+. ++||++++|+||
T Consensus       108 g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg  178 (246)
T 2ag5_A          108 SMYLMIKAFLPKMLAQK--------SGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFI-QQGIRCNCVCPG  178 (246)
T ss_dssp             HHHHHHHHHHHHHHHHT--------CEEEEEECCSBTTTBCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEES
T ss_pred             HHHHHHHHHHHHHHhcC--------CceEEEEechHhCcCCCCCCccHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEeeC
Confidence            99999999999998876        68999999999888877 889999999999999999999999 899999999999


Q ss_pred             cccCCCCCCCC----ChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          161 PIKDTAGVSKL----APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       161 ~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +++|++.....    ........+....+.+++.+|+|+|+.+++|+++.+.+++|+.+.+|||+.+
T Consensus       179 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdgG~~~  245 (246)
T 2ag5_A          179 TVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVTGNPVIIDGGWSL  245 (246)
T ss_dssp             CEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECTTGGG
T ss_pred             cCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            99998642210    1122233344456778899999999999999999899999999999999653

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=1e-34  Score=237.46  Aligned_cols=190  Identities=20%  Similarity=0.279  Sum_probs=167.6

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      ++.++.+|++|+++++++++.+.  ++++|++|||||+....++.+.+.++|++++++|+.++++++++++|.|++    
T Consensus        45 ~~~~~~~Dv~~~~~v~~~~~~~~--~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~----  118 (244)
T 4e4y_A           45 NLKFIKADLTKQQDITNVLDIIK--NVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKV----  118 (244)
T ss_dssp             TEEEEECCTTCHHHHHHHHHHTT--TCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEE----
T ss_pred             cceEEecCcCCHHHHHHHHHHHH--hCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhcc----
Confidence            46788999999999999996554  789999999999888888999999999999999999999999999999865    


Q ss_pred             CCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCC--------
Q 025124          101 QASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--------  172 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~--------  172 (257)
                            .|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+|++|+||+++|++......        
T Consensus       119 ------~g~iv~~sS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~  191 (244)
T 4e4y_A          119 ------GASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLA-KYQIRVNTVCPGTVDTDLYRNLIQKYANNVGI  191 (244)
T ss_dssp             ------EEEEEEECCGGGTCCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEESCBCCHHHHHHHHHHHHHHTC
T ss_pred             ------CcEEEEECCHHHccCCCCCchhHHHHHHHHHHHHHHHHHHH-HcCeEEEEEecCccCchhhHHHHHhhhhhcCC
Confidence                  47899999999999999999999999999999999999999 899999999999999986532111        


Q ss_pred             -hHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          173 -PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       173 -~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                       ..+.........+.+++.+|+|+|+.+++|+++.+.+++|+.+.+|||+++
T Consensus       192 ~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~~  243 (244)
T 4e4y_A          192 SFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDKSKFMTGGLIPIDGGYTA  243 (244)
T ss_dssp             CHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CHHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhcCccccccCCeEeECCCccC
Confidence             111344455667888999999999999999999999999999999999764

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=3.3e-34  Score=234.42  Aligned_cols=200  Identities=18%  Similarity=0.188  Sum_probs=171.9

Q ss_pred             CcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC---CCCCCCCHHHHHHHHHHH
Q 025124            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL---VPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         3 r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~n   79 (257)
                      |++++++++.+++  .+       +|+.|.++++++++++.++++++|+||||||+...   .++.+.+.++|+.++++|
T Consensus        36 r~~~~~~~~~~~~--~~-------~~~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N  106 (244)
T 1zmo_A           36 ADAAERQRFESEN--PG-------TIALAEQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEAL  106 (244)
T ss_dssp             GSHHHHHHHHHHS--TT-------EEECCCCCGGGHHHHHGGGSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHh--CC-------CcccCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHH
Confidence            8888887776665  22       23337788889999999999999999999998777   788999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.+++.++++++|+|++++        .|+||++||..+..+.++...|+++|+++++|+++++.|+. ++||+||+|+|
T Consensus       107 ~~g~~~l~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~P  177 (244)
T 1zmo_A          107 SIFPILLLQSAIAPLRAAG--------GASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLS-RDGILLYAIGP  177 (244)
T ss_dssp             THHHHHHHHHHHHHHHHTT--------CEEEEEECCGGGTSCCTTCTTHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHcC--------CcEEEEECChhhCCCCCCchHHHHHHHHHHHHHHHHHHHHh-hcCcEEEEEee
Confidence            9999999999999999876        79999999999999999999999999999999999999999 89999999999


Q ss_pred             CcccCCCC---CCCCChHHHHHHhhh-hccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          160 GPIKDTAG---VSKLAPEEIRSKATD-YMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       160 g~v~t~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                      |+++|++.   ... ...+....... ..+++++.+|+|+|+.+++|+++.+.+++|+.+.+|||.
T Consensus       178 G~v~T~~~~~~~~~-~~~~~~~~~~~~~~p~~r~~~pe~vA~~v~~l~s~~~~~~tG~~i~vdgG~  242 (244)
T 1zmo_A          178 NFFNNPTYFPTSDW-ENNPELRERVDRDVPLGRLGRPDEMGALITFLASRRAAPIVGQFFAFTGGY  242 (244)
T ss_dssp             SSBCBTTTBCHHHH-HHCHHHHHHHHHHCTTCSCBCHHHHHHHHHHHHTTTTGGGTTCEEEESTTC
T ss_pred             CCCcCCcccccccc-cchHHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEeCCCC
Confidence            99999875   211 00122222333 567788999999999999999999999999999999995

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=3.5e-33  Score=232.90  Aligned_cols=214  Identities=22%  Similarity=0.272  Sum_probs=181.1

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeC-CCCCCCCCC-----CCCCHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNA-AAGNFLVPA-----EDLSPNGFRT   74 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~-ag~~~~~~~-----~~~~~~~~~~   74 (257)
                      ++|+.++++++.+++   +.++.++.+|++|.++++++++++ ++++++|++||| +|......+     .+.+.++|++
T Consensus        60 ~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~-~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~  135 (281)
T 3ppi_A           60 ADLAAEKGKALADEL---GNRAEFVSTNVTSEDSVLAAIEAA-NQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTK  135 (281)
T ss_dssp             EESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHH-TTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHH
T ss_pred             EeCChHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHH-HHhCCCCeEEEccCcccccccccccccccCCHHHHHH
Confidence            368888888887776   568999999999999999999999 888999999999 555444443     4688999999


Q ss_pred             HHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEE
Q 025124           75 VIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRV  154 (257)
Q Consensus        75 ~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v  154 (257)
                      .+++|+.+++++++++++.|.+.....  ....|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+|
T Consensus       136 ~~~~n~~~~~~l~~~~~~~~~~~~~~~--~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v  212 (281)
T 3ppi_A          136 TIDLYLNGTYNVARLVAASIAAAEPRE--NGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAARDLS-SAGIRV  212 (281)
T ss_dssp             HHHHHTHHHHHHHHHHHHHHHTSCCCT--TSCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEE
T ss_pred             HHHHHhHHHHHHHHHHHHHHHhhcccc--cCCCeEEEEEecccccCCCCCCcccHHHHHHHHHHHHHHHHHHh-hcCeEE
Confidence            999999999999999999998732100  01168999999999999999999999999999999999999999 889999


Q ss_pred             EEEecCcccCCCCCCCCChHHHHHHhhhhccC-CCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCC
Q 025124          155 NGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSN  225 (257)
Q Consensus       155 ~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~  225 (257)
                      ++|+||++.|++....  ..+....+....+. +++.+|+|+|+.+++|+++  .+++|+.+.+|||+.+.+
T Consensus       213 ~~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~--~~~tG~~i~vdGG~~~~p  280 (281)
T 3ppi_A          213 NTIAPGTMKTPIMESV--GEEALAKFAANIPFPKRLGTPDEFADAAAFLLTN--GYINGEVMRLDGAQRFTP  280 (281)
T ss_dssp             EEEEECSBCCHHHHTT--CHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHC--SSCCSCEEEESTTCCCCC
T ss_pred             EEEecCcCCchhhhcc--cHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHcC--CCcCCcEEEECCCcccCC
Confidence            9999999999875432  23444555566666 7899999999999999975  689999999999988764

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=1.7e-33  Score=230.32  Aligned_cols=210  Identities=26%  Similarity=0.393  Sum_probs=164.7

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      .|++++++++.+++.+.+.++.++.+|++|+++++++++++.+.++++|+||||||.....++.+.+.++|+..+++|+.
T Consensus        37 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~  116 (247)
T 2hq1_A           37 SPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLK  116 (247)
T ss_dssp             CTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECC---------------CHHHHHHTHH
T ss_pred             CcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhH
Confidence            46777788888888877888999999999999999999999999999999999999877777888899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.+++++++.|++++        .++||++||..+..+.++...|+++|++++.|+++++.|+. +.||++++|+||+
T Consensus       117 ~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~  187 (247)
T 2hq1_A          117 SAYLCTKAVSKIMLKQK--------SGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFA-AKGIYCNAVAPGI  187 (247)
T ss_dssp             HHHHHHHHHHHHHHHHT--------CEEEEEECC---------CHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECS
T ss_pred             HHHHHHHHHHHHHHhcC--------CcEEEEEcChhhccCCCCCcHhHHHHHHHHHHHHHHHHHHH-HcCcEEEEEEEEE
Confidence            99999999999998866        68999999998888888899999999999999999999998 8899999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      +.|++....  .......+....+..++.+|+|+++.+++++++.+.+++|+.+.++||..
T Consensus       188 v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  246 (247)
T 2hq1_A          188 IKTDMTDVL--PDKVKEMYLNNIPLKRFGTPEEVANVVGFLASDDSNYITGQVINIDGGLV  246 (247)
T ss_dssp             BCCHHHHTS--CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC-
T ss_pred             Eeccchhhc--chHHHHHHHhhCCCCCCCCHHHHHHHHHHHcCcccccccCcEEEeCCCcc
Confidence            998864321  23333444455677789999999999999999888889999999999964

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=1.1e-32  Score=226.37  Aligned_cols=211  Identities=30%  Similarity=0.451  Sum_probs=187.4

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.+++.+.+.++.++.+|++|+++++++++++.++++++|+||||||.....++ +.+.++|+..+++|+.
T Consensus        42 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~-~~~~~~~~~~~~~N~~  120 (255)
T 1fmc_A           42 DINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVF  120 (255)
T ss_dssp             ESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTH
T ss_pred             cCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhH
Confidence            688888988888988878889999999999999999999999999999999999998766666 7899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      ++++++++++|.|.+++        .++||++||..+..+.++...|+++|++++.|+++++.|+. ++||++++|+||+
T Consensus       121 ~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~-~~~i~v~~v~Pg~  191 (255)
T 1fmc_A          121 SFFHLSQLVAPEMEKNG--------GGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLG-EKNIRVNGIAPGA  191 (255)
T ss_dssp             HHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHH-TTTEEEEEEEECS
T ss_pred             HHHHHHHHHHHHHHhcC--------CcEEEEEcchhhcCCCCCCcccHHHHHHHHHHHHHHHHHhh-hcCcEEEEEeccc
Confidence            99999999999998876        68999999999998888899999999999999999999998 8899999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +.|++...... ...........+.+++.+|+|+|+++++++++.+.+++|+.+.++||...
T Consensus       192 v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~  252 (255)
T 1fmc_A          192 ILTDALKSVIT-PEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQILTVSGGGVQ  252 (255)
T ss_dssp             BCSHHHHTTCC-HHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCC
T ss_pred             CcchhhhhccC-hHHHHHHHhcCCcccCCCHHHHHHHHHHHhCCccccCCCcEEEECCceec
Confidence            99986543322 33334445566778899999999999999998888899999999999654

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.1e-33  Score=242.12  Aligned_cols=192  Identities=25%  Similarity=0.277  Sum_probs=171.8

Q ss_pred             HHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHH
Q 025124            8 LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC   87 (257)
Q Consensus         8 l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~   87 (257)
                      ++++.+++.+.+.++.++.+|++|+++++++++++.+++|+||+||||||+....++.+.+.++|+.++++|+.++++++
T Consensus        89 l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~  168 (346)
T 3kvo_A           89 IYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLAS  168 (346)
T ss_dssp             HHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHH
Confidence            67778888888889999999999999999999999999999999999999988889999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCCCCCCCceEEEEcccccccc--cccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc-ccC
Q 025124           88 HEALKYLKKGGRGQASSSSGGIIINISATLHYTA--TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP-IKD  164 (257)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~--~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~-v~t  164 (257)
                      ++++|+|++++        .|+||++||..+..+  .++...|+++|+++++|+++++.|+.  .||+||+|+||+ +.|
T Consensus       169 ~~~lp~m~~~~--------~g~IV~iSS~~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~--~gIrvn~v~PG~~i~T  238 (346)
T 3kvo_A          169 KACIPYLKKSK--------VAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEFK--GEIAVNALWPKTAIHT  238 (346)
T ss_dssp             HHHHHHHTTCS--------SCEEEEECCCCCCCGGGTSSSHHHHHHHHHHHHHHHHHHHHTT--TTCEEEEEECSBCBCC
T ss_pred             HHHHHHHHHCC--------CCEEEEECCHHHcCCCCCCCchHHHHHHHHHHHHHHHHHHHhc--CCcEEEEEeCCCcccc
Confidence            99999999876        799999999998877  67889999999999999999999996  689999999996 776


Q ss_pred             CCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          165 TAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                      ++.          +......+.+++.+|+|+|+++++|+++ +++++|+++ +|||.
T Consensus       239 ~~~----------~~~~~~~~~~r~~~pedvA~~v~~L~s~-~~~itG~~i-vdgg~  283 (346)
T 3kvo_A          239 AAM----------DMLGGPGIESQCRKVDIIADAAYSIFQK-PKSFTGNFV-IDENI  283 (346)
T ss_dssp             HHH----------HHHCC--CGGGCBCTHHHHHHHHHHHTS-CTTCCSCEE-EHHHH
T ss_pred             HHH----------HhhccccccccCCCHHHHHHHHHHHHhc-CCCCCceEE-ECCcE
Confidence            532          2233334567789999999999999999 899999998 99884

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=4.2e-33  Score=232.09  Aligned_cols=210  Identities=24%  Similarity=0.350  Sum_probs=181.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCC-CCCHHHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAE-DLSPNGFRTVIEID   79 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~-~~~~-~~~~~~~~~~~~~n   79 (257)
                      +|+.++++++.+.+.+.+.++.++.+|++|.++++++++++.++++++|+||||||.... .++. +.+.++|+..+++|
T Consensus        65 ~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N  144 (279)
T 3ctm_A           65 YNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVD  144 (279)
T ss_dssp             ESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHH
T ss_pred             eCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHH
Confidence            466666777777777667789999999999999999999999999999999999997665 6666 88899999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccc--cccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEE
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA--TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~--~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v  157 (257)
                      +.+++.+++.+++.|.+++        .++||++||..+..+  .++...|+++|++++.|+++++.|+. ++| ++++|
T Consensus       145 ~~g~~~~~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~-~v~~v  214 (279)
T 3ctm_A          145 LNGVYYCSHNIGKIFKKNG--------KGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWA-PFA-RVNTI  214 (279)
T ss_dssp             THHHHHHHHHHHHHHHHHT--------CCEEEEECCCTTSCC---CCHHHHHHHHHHHHHHHHHHHHHTT-TTC-EEEEE
T ss_pred             hHHHHHHHHHHHHHHHhcC--------CCeEEEECchHhccCCCCCCcccHHHHHHHHHHHHHHHHHHhc-ccC-CEEEE
Confidence            9999999999999999876        689999999998887  77888999999999999999999998 889 99999


Q ss_pred             ecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          158 APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       158 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +||+++|++...  ........+....+.+++.+|+|+|+.+++|+++.+.+++|+.+.+|||..+
T Consensus       215 ~Pg~v~t~~~~~--~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdgG~~~  278 (279)
T 3ctm_A          215 SPGYIDTDITDF--ASKDMKAKWWQLTPLGREGLTQELVGGYLYLASNASTFTTGSDVVIDGGYTC  278 (279)
T ss_dssp             EECSBSSTTTSS--CCHHHHHHHHHHSTTCSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             eccCCccccccc--cChHHHHHHHHhCCccCCcCHHHHHHHHHHHhCccccCccCCEEEECCCeec
Confidence            999999997632  2233334444566788899999999999999998888999999999999754

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=2.4e-33  Score=228.08  Aligned_cols=195  Identities=18%  Similarity=0.208  Sum_probs=162.7

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|+.++++++.+++.   .++.++.+|++|+++++++++++.+++|++|++|||||+....++.+.+.++|++++++|+
T Consensus        33 ~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~  109 (235)
T 3l6e_A           33 MGRRYQRLQQQELLLG---NAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNL  109 (235)
T ss_dssp             EESCHHHHHHHHHHHG---GGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEEEECCCC------CCCHHHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHhc---CCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHh
Confidence            3688999998888873   3589999999999999999999999999999999999998788899999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .|++.++++++|.|+++         +++||++||..+..+.++...|++||+|+++|+++++.|+. ++||++++|+||
T Consensus       110 ~g~~~l~~~~~~~~~~~---------~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG  179 (235)
T 3l6e_A          110 VSTILVAQQTVRLIGER---------GGVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELK-DSPLRLVNLYPS  179 (235)
T ss_dssp             HHHHHHHHHHHHHHTTT---------CEEEEEECCEECCSSCSSHHHHHHHHHHHHHHHHHHHHHTT-TSSEEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHc---------CCEEEEEeCHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHhh-ccCCEEEEEeCC
Confidence            99999999999999876         46999999999999999999999999999999999999999 899999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhcc-CCCCcccCcEEEecC
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS-DAGKYVNGNTLIVDG  219 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~G~~~~~dg  219 (257)
                      +++|++......           .+..++.+|+|+|+.++++++ +...+++|..+.-..
T Consensus       180 ~v~T~~~~~~~~-----------~~~~~~~~pedvA~~v~~l~~~~~~~~i~~i~~~~~~  228 (235)
T 3l6e_A          180 GIRSEFWDNTDH-----------VDPSGFMTPEDAAAYMLDALEARSSCHVTDLFIGRNE  228 (235)
T ss_dssp             EECCCC----------------------CBCHHHHHHHHHHHTCCCSSEEEEEEEEEECC
T ss_pred             CccCcchhccCC-----------CCCcCCCCHHHHHHHHHHHHhCCCCcceeeEEEecCC
Confidence            999987532211           123468899999999999998 556667776655443

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=3.9e-34  Score=235.97  Aligned_cols=206  Identities=18%  Similarity=0.133  Sum_probs=176.5

Q ss_pred             CCcHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHH--HhCCcc--EEEeCCCCCCC--CCCCC-CCHHHH
Q 025124            2 GRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTIN--HFGKLD--ILVNAAAGNFL--VPAED-LSPNGF   72 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~--~~g~id--~li~~ag~~~~--~~~~~-~~~~~~   72 (257)
                      +|+.++++++.+++.+.  +.++.++.+|++|+++++++++++.+  .+|++|  +||||||+...  .++.+ .+.++|
T Consensus        40 ~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~  119 (259)
T 1oaa_A           40 ARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEV  119 (259)
T ss_dssp             ESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHH
T ss_pred             eCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHH
Confidence            68899999999988765  56789999999999999999999998  778899  99999997543  45677 689999


Q ss_pred             HHHHHHHhHHHHHHHHHHHHHHHhc--CCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCC
Q 025124           73 RTVIEIDSVGTFIMCHEALKYLKKG--GRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY  150 (257)
Q Consensus        73 ~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~  150 (257)
                      +.++++|+.|++.++++++|.|+++  .        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. + 
T Consensus       120 ~~~~~~N~~g~~~l~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~-  189 (259)
T 1oaa_A          120 NNYWALNLTSMLCLTSGTLNAFQDSPGL--------SKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLAAEEP-S-  189 (259)
T ss_dssp             HHHHHHHTHHHHHHHHHHHHTSCCCTTC--------EEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHCT-T-
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccCC--------CceEEEEcCchhcCCCCCccHHHHHHHHHHHHHHHHHhhCC-C-
Confidence            9999999999999999999999875  3        68999999999999999999999999999999999999986 4 


Q ss_pred             CeEEEEEecCcccCCCCCCCC---ChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecC
Q 025124          151 AIRVNGIAPGPIKDTAGVSKL---APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDG  219 (257)
Q Consensus       151 gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dg  219 (257)
                       |+||+|+||+++|++.....   ...+....+....|.+++.+|+|+|+.+++|+++ +++++|+++.+||
T Consensus       190 -i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~~~-~~~itG~~i~vdg  259 (259)
T 1oaa_A          190 -VRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGLLQK-DTFQSGAHVDFYD  259 (259)
T ss_dssp             -EEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHHHHHHHH-CCSCTTEEEETTC
T ss_pred             -ceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhcCCcCCHHHHHHHHHHHHhh-ccccCCcEEeccC
Confidence             99999999999998643210   0122333444556778899999999999999985 6889999999886

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=7.2e-33  Score=226.20  Aligned_cols=210  Identities=27%  Similarity=0.370  Sum_probs=186.5

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEE-EEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIG-LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~-~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      +|+.++++++.+++.+.+.++.. +.+|++|.++++++++++.++++++|++|||||.....++.+.+.++|+..+++|+
T Consensus        33 ~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~  112 (245)
T 2ph3_A           33 GQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANL  112 (245)
T ss_dssp             SSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHT
T ss_pred             CCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcc
Confidence            68889999988888887777777 99999999999999999999999999999999987777788899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .+++.+++++++.|.+++        .++||++||..+..+.++...|+++|++++.|+++++.|+. +.||++++|+||
T Consensus       113 ~g~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg  183 (245)
T 2ph3_A          113 SAVFRTTREAVKLMMKAR--------FGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYA-QRGITVNAVAPG  183 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CEEEEEECCTHHHHCCSSBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHhcC--------CCEEEEEeChhhccCCCCCcchHHHHHHHHHHHHHHHHHHH-HcCeEEEEEEEE
Confidence            999999999999998875        68999999999888888899999999999999999999998 889999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      ++.|++....  .......+....+.+++.+|+|+|+.+++++++...+++|+.+.++||..
T Consensus       184 ~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~  243 (245)
T 2ph3_A          184 FIETEMTERL--PQEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEKAGYITGQTLCVDGGLT  243 (245)
T ss_dssp             SBCCHHHHTS--CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCS
T ss_pred             eecCcchhhc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccccccCCEEEECCCCC
Confidence            9998865432  23333344455667788999999999999999877889999999999953

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=5.3e-33  Score=227.49  Aligned_cols=198  Identities=22%  Similarity=0.256  Sum_probs=174.7

Q ss_pred             CCCcHHHHHHHHHHHHhcC-CCeEEEEccC--CCHHHHHHHHHHHHHHhCCccEEEeCCCCC-CCCCCCCCCHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLG-IPAIGLEGDV--RKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVI   76 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~-~~~~~~~~Dl--s~~~~~~~~~~~~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~   76 (257)
                      ++|++++++++.+++.+.+ .++.++.+|+  ++.++++.+++++.+.++++|++|||||+. ...++.+.+.++|++.+
T Consensus        44 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~  123 (247)
T 3i1j_A           44 LGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVM  123 (247)
T ss_dssp             EESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHH
T ss_pred             EecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHH
Confidence            3689999999999998875 5677777777  999999999999999999999999999975 45778899999999999


Q ss_pred             HHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCC-CCeEEE
Q 025124           77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTD-YAIRVN  155 (257)
Q Consensus        77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~-~gi~v~  155 (257)
                      ++|+.+++.++++++|+|++++        .|+||++||..+..+.++...|+++|+|+++|+++++.|+. + +||+|+
T Consensus       124 ~~N~~g~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~~i~v~  194 (247)
T 3i1j_A          124 HVNVNATFMLTRALLPLLKRSE--------DASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQTLADELE-GVTAVRAN  194 (247)
T ss_dssp             HHHTHHHHHHHHHHHHHHTTSS--------SEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHT-TTSSEEEE
T ss_pred             HHhhHHHHHHHHHHHHHHHhCC--------CCeEEEEcchhhcCCCCCcchhHHHHHHHHHHHHHHHHHhc-CCCCeEEE
Confidence            9999999999999999998876        78999999999999999999999999999999999999997 5 899999


Q ss_pred             EEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEe
Q 025124          156 GIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIV  217 (257)
Q Consensus       156 ~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~  217 (257)
                      +|+||+++|++...          ........+..+|+|+++.++||+++++++++|+.|.+
T Consensus       195 ~v~PG~v~t~~~~~----------~~~~~~~~~~~~p~dva~~~~~l~s~~~~~itG~~i~~  246 (247)
T 3i1j_A          195 SINPGATRTGMRAQ----------AYPDENPLNNPAPEDIMPVYLYLMGPDSTGINGQALNA  246 (247)
T ss_dssp             EEECCCCSSHHHHH----------HSTTSCGGGSCCGGGGTHHHHHHHSGGGTTCCSCEEEC
T ss_pred             EEecCcccCccchh----------cccccCccCCCCHHHHHHHHHHHhCchhccccCeeecC
Confidence            99999999875311          11112223567899999999999999999999999875

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=7e-33  Score=226.67  Aligned_cols=209  Identities=28%  Similarity=0.400  Sum_probs=185.3

Q ss_pred             CCcHHHHHHHHHHHHh-cCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            2 GRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~-~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      +|+.++++++.+++.+ .+.++.++.+|++|+++++++++++.++++++|+||||||.....++.+.+.++|+..+++|+
T Consensus        38 ~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~  117 (248)
T 2pnf_A           38 GTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNL  117 (248)
T ss_dssp             ESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             eCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhh
Confidence            6888888888888876 467899999999999999999999999999999999999987777788889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .+++++++++++.|.+++        .++||++||..+..+.++...|+++|++++.|+++++.|+. +.||++++|+||
T Consensus       118 ~~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~v~Pg  188 (248)
T 2pnf_A          118 TGTFLVTQNSLRKMIKQR--------WGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELA-PRNVLVNAVAPG  188 (248)
T ss_dssp             HHHHHHHHHHCHHHHHHT--------CEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHhcC--------CcEEEEEccHHhcCCCCCCchHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEec
Confidence            999999999999998875        68999999998888888899999999999999999999998 889999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                      ++.|++... . .......+....+.+++.+|+|+|+.+++++++...+++|+.+.+|||+
T Consensus       189 ~v~t~~~~~-~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  247 (248)
T 2pnf_A          189 FIETDMTAV-L-SEEIKQKYKEQIPLGRFGSPEEVANVVLFLCSELASYITGEVIHVNGGM  247 (248)
T ss_dssp             SBCCGGGGG-S-CHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             eecCchhhh-c-cHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCchhhcCCCcEEEeCCCc
Confidence            999987543 2 2333334445567778899999999999999987788999999999995

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=4.2e-33  Score=228.83  Aligned_cols=209  Identities=29%  Similarity=0.374  Sum_probs=180.7

Q ss_pred             CCcHHHHHHHHHHHHhcCCCe-EEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            2 GRRKTVLRSAVAALHSLGIPA-IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~-~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      +|+.++++++.+++   +.++ .++.+|++|.++++.+++++.+ ++++|+||||||.....++.+.+.++|+..+++|+
T Consensus        42 ~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~  117 (254)
T 2wsb_A           42 DREAAALDRAAQEL---GAAVAARIVADVTDAEAMTAAAAEAEA-VAPVSILVNSAGIARLHDALETDDATWRQVMAVNV  117 (254)
T ss_dssp             ESCHHHHHHHHHHH---GGGEEEEEECCTTCHHHHHHHHHHHHH-HSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHT
T ss_pred             eCCHHHHHHHHHHh---cccceeEEEEecCCHHHHHHHHHHHHh-hCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHh
Confidence            68888888777766   3456 8899999999999999999998 99999999999988777888899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccc--hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ--IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~--~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      .+++.++++++|.|++++        .++||++||..+..+.+..  ..|+++|++++.|+++++.|+. ++||++++|+
T Consensus       118 ~~~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~-~~gi~v~~v~  188 (254)
T 2wsb_A          118 DGMFWASRAFGRAMVARG--------AGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWA-GRGVRVNALA  188 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCSSSCBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHhcC--------CcEEEEEecchhccCCCCCcchHHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEE
Confidence            999999999999999876        6899999999988887777  8999999999999999999998 8899999999


Q ss_pred             cCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       159 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ||++.|++..................+.+++.+|+|+|+.+++++++.+.+++|+.+.+|||...
T Consensus       189 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~  253 (254)
T 2wsb_A          189 PGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLASPAASYVTGAILAVDGGYTV  253 (254)
T ss_dssp             ECCBCSHHHHHHHTCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ecccCchhhhccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccccccCCEEEECCCEec
Confidence            99999886432111123333444456777889999999999999998888999999999999653

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=8.1e-33  Score=224.81  Aligned_cols=199  Identities=20%  Similarity=0.233  Sum_probs=176.3

Q ss_pred             CCCcHHHHHHHHHHHH-hcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~-~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      ++|+.++++++.+++. ..+.++.++.+|++|+++++++++++.++++++|++|||||+....++.+.+.++|+..+++|
T Consensus        32 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N  111 (235)
T 3l77_A           32 GARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVN  111 (235)
T ss_dssp             EESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHH
T ss_pred             EeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHH
Confidence            3689999999998887 447889999999999999999999999999999999999999888899999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.++++++++++|.|.+.         .+++|+++|..+..+.++.+.|+++|+++++|+++++.  . ..||++++|+|
T Consensus       112 ~~g~~~l~~~~~~~~~~~---------~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~--~-~~~i~v~~v~P  179 (235)
T 3l77_A          112 LLGVWRTLKAFLDSLKRT---------GGLALVTTSDVSARLIPYGGGYVSTKWAARALVRTFQI--E-NPDVRFFELRP  179 (235)
T ss_dssp             THHHHHHHHHHHHHHHHH---------TCEEEEECCGGGSSCCTTCHHHHHHHHHHHHHHHHHHH--H-CTTSEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHhhc---------CCcEEEEecchhcccCCCcchHHHHHHHHHHHHHHHhh--c-CCCeEEEEEeC
Confidence            999999999999999554         58899999999999999999999999999999999944  4 66999999999


Q ss_pred             CcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       160 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                      |+++|++.......          ....++.+|+|+|+.+++|+++...+++|+.+..++|.
T Consensus       180 G~v~T~~~~~~~~~----------~~~~~~~~p~dva~~v~~l~~~~~~~~~~~~~~~~~~~  231 (235)
T 3l77_A          180 GAVDTYFGGSKPGK----------PKEKGYLKPDEIAEAVRCLLKLPKDVRVEELMLRSVYQ  231 (235)
T ss_dssp             CSBSSSTTTCCSCC----------CGGGTCBCHHHHHHHHHHHHTSCTTCCCCEEEECCTTS
T ss_pred             CccccccccccCCc----------ccccCCCCHHHHHHHHHHHHcCCCCCccceEEEeeccc
Confidence            99999876443221          11126789999999999999999999999999999985

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=6.7e-33  Score=230.16  Aligned_cols=206  Identities=24%  Similarity=0.294  Sum_probs=161.4

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHHh
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~   80 (257)
                      +|+.++++++.+++   +.++.++.+|++|+++++++++++.+++|++|+||||||+... .++.+.+.++|++.+++|+
T Consensus        59 ~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~  135 (272)
T 4dyv_A           59 GRRLDALQETAAEI---GDDALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNL  135 (272)
T ss_dssp             ESCHHHHHHHHHHH---TSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHT
T ss_pred             ECCHHHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhcc
Confidence            68888888887776   4678999999999999999999999999999999999998654 6888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .|++.++++++|.|++++.      ..|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+||
T Consensus       136 ~g~~~~~~~~~~~~~~~~~------~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG  208 (272)
T 4dyv_A          136 TGPFLCTQEAFRVMKAQEP------RGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGR-VHDIACGQIDIG  208 (272)
T ss_dssp             HHHHHHHHHHHHHHHHSSS------CCEEEEEECCSSTTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHhCCC------CCcEEEEECchhhcCCCCCchHHHHHHHHHHHHHHHHHHHhC-ccCEEEEEEEEC
Confidence            9999999999999997631      148999999999999999999999999999999999999999 899999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCC
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG  220 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg  220 (257)
                      +++|++.......   ........+..++.+|+|+|++++||++.+.....+.......+
T Consensus       209 ~v~T~~~~~~~~~---~~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~~~~~~i~i~~~~  265 (272)
T 4dyv_A          209 NADTPMAQKMKAG---VPQADLSIKVEPVMDVAHVASAVVYMASLPLDANVQFMTIMATK  265 (272)
T ss_dssp             ECC---------------------------CHHHHHHHHHHHHHSCTTSCCCEEEEEEC-
T ss_pred             cccChhhhhhccc---chhhhhcccccCCCCHHHHHHHHHHHhCCCCcCccceEEEeccC
Confidence            9999875432211   11122334566789999999999999997666544444443333

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=8.4e-33  Score=228.35  Aligned_cols=212  Identities=21%  Similarity=0.371  Sum_probs=180.2

Q ss_pred             CCcHHHHHHHHHHHHhc-CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            2 GRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      +|+.++.++..+++.+. +.++.++.+|++|.++++.+++++.++++++|+||||||.....++.+.+.++|+..+++|+
T Consensus        45 ~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~  124 (265)
T 1h5q_A           45 YRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNV  124 (265)
T ss_dssp             ESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHT
T ss_pred             eCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhh
Confidence            45555555555555433 67899999999999999999999999999999999999988777888899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccccccc-------chhhHHHHHHHHHHHHHHHHHhcCCCCeE
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-------QIHVSAAKAAVDSITRSLALEWGTDYAIR  153 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~-------~~~Y~~sK~a~~~l~~~la~e~~~~~gi~  153 (257)
                      .+++.+++++++.|.+++.       .++||++||..+..+.+.       ...|+++|++++.|+++++.|+. ++||+
T Consensus       125 ~~~~~l~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~  196 (265)
T 1h5q_A          125 FGVFNTCRAVAKLWLQKQQ-------KGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWA-SAGIR  196 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGTSCCEEETTEECSCHHHHHHHHHHHHHHHHHHHHHG-GGTEE
T ss_pred             HhHHHHHHHHHHHHHhcCC-------CceEEEeCCchhhccccccccccccccccHHHHHHHHHHHHHHHHHHH-hcCcE
Confidence            9999999999999987641       489999999988766543       67899999999999999999998 88999


Q ss_pred             EEEEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          154 VNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       154 v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +++|+||++.|++....  ............+.+++.+|+|+|+.+++|+++.+.+++|+.+.+|||..+
T Consensus       197 v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~  264 (265)
T 1h5q_A          197 VNALSPGYVNTDQTAHM--DKKIRDHQASNIPLNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQLI  264 (265)
T ss_dssp             EEEEEECSBCCGGGGGS--CHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTGGG
T ss_pred             EEEEecCcccccccccc--chhHHHHHHhcCcccCCCCHHHHHHHHHhhccCchhcCcCcEEEecCCEeC
Confidence            99999999999875432  233334444556778899999999999999998888999999999999754

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=1.4e-32  Score=225.33  Aligned_cols=212  Identities=25%  Similarity=0.329  Sum_probs=182.5

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.+++... .++.++.+|++|+++++.+++++.++++++|+||||||.....++.+.+.++|++.+++|+.
T Consensus        37 ~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~  115 (251)
T 1zk4_A           37 GRHSDVGEKAAKSVGTP-DQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLD  115 (251)
T ss_dssp             ESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTH
T ss_pred             eCCHHHHHHHHHHhhcc-CceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhH
Confidence            68888888877776433 57899999999999999999999999999999999999887788889999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCC-ceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEec
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSG-GIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAP  159 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~-g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~~gi~v~~v~P  159 (257)
                      +++.+++.+++.|.+++        . ++||++||..+..+.++...|+++|++++.|+++++.|+. .+.||++++|+|
T Consensus       116 ~~~~~~~~~~~~~~~~~--------~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~P  187 (251)
T 1zk4_A          116 GVFFGTRLGIQRMKNKG--------LGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHP  187 (251)
T ss_dssp             HHHHHHHHHHHHHTTSS--------SCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHhcC--------CCCEEEEeCCchhccCCCCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEee
Confidence            99999999999998765        4 8999999999999989999999999999999999999874 256899999999


Q ss_pred             CcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       160 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      |++.|++.... .............+.+++.+|+|+|+.+++++++.+.+++|+.+.+|||..+
T Consensus       188 g~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~  250 (251)
T 1zk4_A          188 GYIKTPLVDDL-PGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATGSEFVVDGGYTA  250 (251)
T ss_dssp             CCBCCHHHHTS-TTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CcCcchhhhhc-CchhhhHHHhhcCCCCCCcCHHHHHHHHHHHcCcccccccCcEEEECCCccC
Confidence            99999875432 2122222233445677889999999999999998888899999999999754

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=5.9e-33  Score=229.25  Aligned_cols=213  Identities=25%  Similarity=0.348  Sum_probs=177.8

Q ss_pred             CCcHHHHHHHHHHHHhcC-------CCeEEEEccCCCHHHHHHHHHHHHHHhCCc-cEEEeCCCCCCCCCCCCCCHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLG-------IPAIGLEGDVRKREDAVRVVESTINHFGKL-DILVNAAAGNFLVPAEDLSPNGFR   73 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~-------~~~~~~~~Dls~~~~~~~~~~~~~~~~g~i-d~li~~ag~~~~~~~~~~~~~~~~   73 (257)
                      +|+.++++++.+++.+.+       .++.++.+|++|.++++++++++.++++++ |+||||||.....++.+.+.++|+
T Consensus        38 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~  117 (264)
T 2pd6_A           38 DLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWD  117 (264)
T ss_dssp             ESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHH
T ss_pred             eCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHH
Confidence            688888888877776555       678999999999999999999999999999 999999998777778889999999


Q ss_pred             HHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeE
Q 025124           74 TVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIR  153 (257)
Q Consensus        74 ~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~  153 (257)
                      ..+++|+.+++++++++++.|.+++.       .|+||++||..+..+.++...|+++|++++.|+++++.|+. ++||+
T Consensus       118 ~~~~~N~~g~~~l~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~  189 (264)
T 2pd6_A          118 KVIAVNLKGTFLVTQAAAQALVSNGC-------RGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELG-RHGIR  189 (264)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHHHHTC-------CEEEEEECCTHHHHCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEE
T ss_pred             HHHhhccHHHHHHHHHHHHHHHhcCC-------CceEEEECChhhccCCCCChhhHHHHHHHHHHHHHHHHHhh-hcCeE
Confidence            99999999999999999999987531       37899999999988889999999999999999999999998 88999


Q ss_pred             EEEEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          154 VNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       154 v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      +++|+||++.|++....  .......+....+.+++.+|+|+|+.+++++++.+.+++|+.+.++||..+.
T Consensus       190 v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~  258 (264)
T 2pd6_A          190 CNSVLPGFIATPMTQKV--PQKVVDKITEMIPMGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGGLFMA  258 (264)
T ss_dssp             EEEEEECSBCSCC------------CTGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC---
T ss_pred             EEEEeeecccccchhhc--CHHHHHHHHHhCCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCceec
Confidence            99999999999875321  1222333444556778899999999999999988889999999999998764

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=2.1e-32  Score=230.36  Aligned_cols=215  Identities=32%  Similarity=0.520  Sum_probs=184.3

Q ss_pred             CCcHHHHHHHHHHHHhc-CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            2 GRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      +|+.++++++.+++.+. +.++.++.+|++|.++++++++++.++++++|+||||||+....++.+.+.++|+..+++|+
T Consensus        57 ~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~  136 (302)
T 1w6u_A           57 SRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVL  136 (302)
T ss_dssp             ESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHH
T ss_pred             eCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHh
Confidence            68888899888888776 77899999999999999999999999999999999999987777788899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .+++.+++++++.|.++..       .++||++||..+..+.++...|+++|++++.|+++++.++. ++||++++|+||
T Consensus       137 ~~~~~l~~~~~~~~~~~~~-------~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~-~~gi~v~~v~Pg  208 (302)
T 1w6u_A          137 NGTAFVTLEIGKQLIKAQK-------GAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWG-KYGMRFNVIQPG  208 (302)
T ss_dssp             HHHHHHHHHHHHHHHHTTC-------CEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHhcC-------CCEEEEEcccccccCCCCcchhHHHHHHHHHHHHHHHHHhh-hcCcEEEEEeec
Confidence            9999999999999984321       68999999999998888999999999999999999999998 899999999999


Q ss_pred             cccCCCCCCCCCh-HHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          161 PIKDTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       161 ~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      ++.|+........ ...........+.+++.+|+|+|+++++++++.+.+++|+.+.+|||..+.
T Consensus       209 ~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~  273 (302)
T 1w6u_A          209 PIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVL  273 (302)
T ss_dssp             CBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHH
T ss_pred             cCCCcchhhhcccchhhHHHHHhcCCcCCCCCHHHHHHHHHHHcCCcccccCCCEEEECCCeeec
Confidence            9998844333222 122223445567788999999999999999988888999999999997553

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=1.1e-32  Score=226.01  Aligned_cols=204  Identities=25%  Similarity=0.233  Sum_probs=166.5

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHHHh
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~   80 (257)
                      +|+.++++++.+++   +.++.++.+|++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|+..+++|+
T Consensus        31 ~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~  107 (248)
T 3asu_A           31 GRRQERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNN  107 (248)
T ss_dssp             ESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHT
T ss_pred             eCCHHHHHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHh
Confidence            68888888877766   357899999999999999999999999999999999999763 56778899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .|++.++++++|+|.+++        .|+||++||..+..+.++...|+++|+++++|+++++.|+. ++||+||+|+||
T Consensus       108 ~g~~~l~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG  178 (248)
T 3asu_A          108 KGLVYMTRAVLPGMVERN--------HGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLH-GTAVRVTDIEPG  178 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTT-TSCCEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHhcC--------CceEEEEccchhccCCCCCchHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEecc
Confidence            999999999999998876        68999999999999999999999999999999999999999 899999999999


Q ss_pred             ccc-CCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCC
Q 025124          161 PIK-DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG  220 (257)
Q Consensus       161 ~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg  220 (257)
                      +++ |++.........  .............+|+|+|+.+++|+++ ..+++|+.+.++++
T Consensus       179 ~v~gT~~~~~~~~~~~--~~~~~~~~~~~~~~p~dvA~~v~~l~s~-~~~~~g~~i~v~~~  236 (248)
T 3asu_A          179 LVGGTEFSNVRFKGDD--GKAEKTYQNTVALTPEDVSEAVWWVSTL-PAHVNINTLEMMPV  236 (248)
T ss_dssp             SBCC------------------------CCBCHHHHHHHHHHHHHS-CTTCCCCEEEECCT
T ss_pred             ccccCcchhhcccCch--HHHHHHHhccCCCCHHHHHHHHHHHhcC-CccceeeEEEEccc
Confidence            999 887432111010  0000111112346999999999999986 56799999999876

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=6.5e-33  Score=231.32  Aligned_cols=209  Identities=24%  Similarity=0.240  Sum_probs=171.4

Q ss_pred             CCCcHHHHHHHHHHHHhcCCC-eEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGIP-AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEI   78 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~-~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~   78 (257)
                      ++|+.++++++.+++.+.+.+ +.++.+|++|+++++++++++.+++|++|+||||||+... .++.+.+.++|++++++
T Consensus        63 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~v  142 (281)
T 4dry_A           63 TGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAA  142 (281)
T ss_dssp             EESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHH
Confidence            368999999999999876444 5899999999999999999999999999999999997654 78889999999999999


Q ss_pred             HhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      |+.|++.++++++|.|.++..      ..|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+||+|+
T Consensus       143 N~~g~~~~~~~~~~~~~~~~~------~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~  215 (281)
T 4dry_A          143 NLTGAFLCTQHAFRMMKAQTP------RGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALDGR-MHDIACGQID  215 (281)
T ss_dssp             HTHHHHHHHHHHHHHHHHSSS------CCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEE
T ss_pred             HhHHHHHHHHHHHHHHHhcCC------CCcEEEEECCHHhCCCCCCChhHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEE
Confidence            999999999999999998630      148999999999999999999999999999999999999999 8999999999


Q ss_pred             cCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCc-ccCcEEEecC
Q 025124          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKY-VNGNTLIVDG  219 (257)
Q Consensus       159 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~-~~G~~~~~dg  219 (257)
                      ||++.|++.......   ........+..++.+|+|+|++++||++.+... +++.++....
T Consensus       216 PG~v~T~~~~~~~~~---~~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~~~i~~~~i~p~~  274 (281)
T 4dry_A          216 IGNAATDMTARMSTG---VLQANGEVAAEPTIPIEHIAEAVVYMASLPLSANVLTMTVMATR  274 (281)
T ss_dssp             EECBCC-------CE---EECTTSCEEECCCBCHHHHHHHHHHHHHSCTTEEEEEEEEEETT
T ss_pred             ECcCcChhhhhhcch---hhhhhhcccccCCCCHHHHHHHHHHHhCCCccCccccEEEEecc
Confidence            999999875432111   001112345567899999999999999966554 4444444433

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-32  Score=230.84  Aligned_cols=213  Identities=32%  Similarity=0.533  Sum_probs=184.0

Q ss_pred             CCcHHHHHHHHHHHHh-----cCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHS-----LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVI   76 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~-----~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~   76 (257)
                      +|+.++++++.+++.+     .+.++.++.+|++|.++++.+++++.+.++++|+||||||.....++.+.+.++|+..+
T Consensus        49 ~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~  128 (303)
T 1yxm_A           49 SRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVL  128 (303)
T ss_dssp             ESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHH
T ss_pred             eCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHH
Confidence            6888899999888876     46789999999999999999999999999999999999998777778888999999999


Q ss_pred             HHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEE
Q 025124           77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (257)
Q Consensus        77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~  156 (257)
                      ++|+.+++++++++++.+.++.        .|+||++||.. ..+.+....|+++|+++.+|+++++.|+. ++||++++
T Consensus       129 ~~N~~g~~~l~~~~~~~~~~~~--------~~~iv~isS~~-~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~  198 (303)
T 1yxm_A          129 ETNLTGTFYMCKAVYSSWMKEH--------GGSIVNIIVPT-KAGFPLAVHSGAARAGVYNLTKSLALEWA-CSGIRINC  198 (303)
T ss_dssp             HHHTHHHHHHHHHHHHHTHHHH--------CEEEEEECCCC-TTCCTTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEE
T ss_pred             HHHhHHHHHHHHHHHHHHHHhc--------CCeEEEEEeec-ccCCCcchhhHHHHHHHHHHHHHHHHHhc-ccCeEEEE
Confidence            9999999999999999765544        68999999988 77888889999999999999999999998 88999999


Q ss_pred             EecCcccCCCCCCCCCh--HHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          157 IAPGPIKDTAGVSKLAP--EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       157 v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      |+||++.|++.......  ...........+.+++.+|+|+|+.+++|+++.+.+++|+.+.+|||..+.
T Consensus       199 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG~~~~  268 (303)
T 1yxm_A          199 VAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSLY  268 (303)
T ss_dssp             EEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             EecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHHHHHHHHHHHhCcccccCCCcEEEECCCeecc
Confidence            99999999853222211  122223344557778899999999999999988889999999999997654

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=6e-33  Score=230.45  Aligned_cols=207  Identities=20%  Similarity=0.225  Sum_probs=170.4

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHHHHh
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~   80 (257)
                      +|+.++++++.+++.+. .++.++.+|++|+++++++++++.+++|++|+||||||+... .++.+.+.++|+.++++|+
T Consensus        52 ~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~  130 (272)
T 2nwq_A           52 GRREERLQALAGELSAK-TRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNI  130 (272)
T ss_dssp             ESCHHHHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             ECCHHHHHHHHHHhhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHH
Confidence            68888898888887654 578999999999999999999999999999999999998664 7888899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCc-eEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGG-IIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g-~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      .+++.++++++|.|++++        .| +||++||..+..+.++...|+++|+++++|+++++.|+. ++||+||+|+|
T Consensus       131 ~g~~~~~~~~~~~m~~~~--------~g~~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~el~-~~gIrvn~v~P  201 (272)
T 2nwq_A          131 KGLLYSTRLLLPRLIAHG--------AGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQ-GTGVRVTNLEP  201 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHC--------TTCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHTTCT-TSCCEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHhcC--------CCcEEEEeCCchhccCCCCCchHHHHHHHHHHHHHHHHHHhC-ccCeEEEEEEc
Confidence            999999999999998875        57 999999999999989999999999999999999999999 89999999999


Q ss_pred             CcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       160 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                      |+++|++.........  .............+|+|+|+.+++|+++ ..+++|+.+.+++|.
T Consensus       202 G~v~T~~~~~~~~~~~--~~~~~~~~~~~~~~pedvA~~v~~l~s~-~~~~~g~~i~v~~~~  260 (272)
T 2nwq_A          202 GLCESEFSLVRFGGDQ--ARYDKTYAGAHPIQPEDIAETIFWIMNQ-PAHLNINSLEIMPVS  260 (272)
T ss_dssp             CSBC----------------------CCCCBCHHHHHHHHHHHHTS-CTTEEEEEEEEEETT
T ss_pred             CCCcCcchhcccccch--HHHHHhhccCCCCCHHHHHHHHHHHhCC-CccCccceEEEeecc
Confidence            9999987532211110  0011111112357999999999999986 567999999999884

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=1.7e-32  Score=226.59  Aligned_cols=213  Identities=20%  Similarity=0.269  Sum_probs=173.5

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCC------CCCHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAE------DLSPNGFRTV   75 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~------~~~~~~~~~~   75 (257)
                      +|+.++++++.+++   +.++.++.+|++|+++++++++++.++++++|+||||||.....++.      +.+.++|+..
T Consensus        43 ~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~  119 (265)
T 2o23_A           43 DLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRV  119 (265)
T ss_dssp             ECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHH
T ss_pred             eCCcHhHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHH
Confidence            56666677666655   56799999999999999999999999999999999999987655544      3789999999


Q ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEE
Q 025124           76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN  155 (257)
Q Consensus        76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~  155 (257)
                      +++|+.+++.+++++++.|.++...  .....++||++||..+..+.++...|+++|+++++|+++++.|+. ++||+++
T Consensus       120 ~~~N~~~~~~l~~~~~~~~~~~~~~--~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~  196 (265)
T 2o23_A          120 LDVNLMGTFNVIRLVAGEMGQNEPD--QGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLA-PIGIRVM  196 (265)
T ss_dssp             HHHHTHHHHHHHHHHHHHHTTSCCC--TTSCCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEE
T ss_pred             HHHHhHHHHHHHHHHHHHHHhcccc--cCCCCcEEEEeCChhhcCCCCCCchhHHHHHHHHHHHHHHHHHHh-hcCcEEE
Confidence            9999999999999999999876200  000168999999999998888999999999999999999999998 8899999


Q ss_pred             EEecCcccCCCCCCCCChHHHHHHhhhhccC-CCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          156 GIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       156 ~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      +|+||++.|++....  ............+. +++.+|+|+|+.++++++  +.+++|+.+.+|||+.+.
T Consensus       197 ~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~--~~~~~G~~i~vdgG~~~~  262 (265)
T 2o23_A          197 TIAPGLFGTPLLTSL--PEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIE--NPFLNGEVIRLDGAIRMQ  262 (265)
T ss_dssp             EEEECCBCCC------------CHHHHTCSSSCSCBCHHHHHHHHHHHHH--CTTCCSCEEEESTTCCCC
T ss_pred             EEEeccccCcccccc--CHHHHHHHHHcCCCcCCCCCHHHHHHHHHHHhh--cCccCceEEEECCCEecC
Confidence            999999999875421  12222223344566 788999999999999995  468999999999998764

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=5.4e-32  Score=221.03  Aligned_cols=202  Identities=16%  Similarity=0.179  Sum_probs=182.1

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.+++...+.++.++.+|++|+++++.+++++.++++++|+||||||.....++.+.+.++|+..+++|+.
T Consensus        40 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~  119 (244)
T 2bd0_A           40 SRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLK  119 (244)
T ss_dssp             ESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTH
T ss_pred             eCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhH
Confidence            68888899988888877778999999999999999999999999999999999999887778888999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.++++++|.|.+++        .++||++||..+..+.++...|+++|+++++|+++++.|+. ++||++++|+||+
T Consensus       120 ~~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~  190 (244)
T 2bd0_A          120 GTFFLTQALFALMERQH--------SGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYAR-KCNVRITDVQPGA  190 (244)
T ss_dssp             HHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHT-TTTEEEEEEEECC
T ss_pred             HHHHHHHHHHHHHHhCC--------CCEEEEEecchhcCCCCCCchhHHHHHHHHHHHHHHHHHhh-ccCcEEEEEECCC
Confidence            99999999999998766        68999999999999989999999999999999999999998 8999999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +.|++...... ..          ..++.+|+|+|+.+++++++...+++|+.+..+++..+
T Consensus       191 v~t~~~~~~~~-~~----------~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~~~~~  241 (244)
T 2bd0_A          191 VYTPMWGKVDD-EM----------QALMMMPEDIAAPVVQAYLQPSRTVVEEIILRPTSGDI  241 (244)
T ss_dssp             BCSTTTCCCCS-TT----------GGGSBCHHHHHHHHHHHHTSCTTEEEEEEEEEETTCCC
T ss_pred             ccchhhhhccc-cc----------cccCCCHHHHHHHHHHHHhCCccccchheEEecccccc
Confidence            99997543211 10          12578999999999999999999999999999998655

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=1.1e-32  Score=243.81  Aligned_cols=193  Identities=23%  Similarity=0.273  Sum_probs=168.7

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCC-ccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGK-LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~-id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .+.++.||++|.++++++++++.+++++ ||+||||||+.....+.+.+.++|+.++++|+.|++++++++++.|.+++ 
T Consensus       260 ~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~-  338 (454)
T 3u0b_A          260 GGTALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGE-  338 (454)
T ss_dssp             TCEEEECCTTSTTHHHHHHHHHHHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCT-
T ss_pred             CCeEEEEecCCHHHHHHHHHHHHHHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-
Confidence            3568999999999999999999999986 99999999998888899999999999999999999999999999988765 


Q ss_pred             CCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHHHH
Q 025124          100 GQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK  179 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~  179 (257)
                             .++||++||..+..+.++++.|+++|+++++|+++++.|+. ++||+||+|+||+++|+|.....  ......
T Consensus       339 -------~g~iV~iSS~a~~~g~~g~~~YaasKaal~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~--~~~~~~  408 (454)
T 3u0b_A          339 -------GGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVLA-DKGITINAVAPGFIETKMTEAIP--LATREV  408 (454)
T ss_dssp             -------TCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECSBCC------------CHH
T ss_pred             -------CCEEEEEeChHhCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEEcCcccChhhhhcc--hhhHHH
Confidence                   78999999999999999999999999999999999999999 89999999999999998764321  122223


Q ss_pred             hhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          180 ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       180 ~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      .....++.+..+|+|+++.++||+++.+.+++|+++.+|||..+.
T Consensus       409 ~~~~~~l~r~g~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~lG  453 (454)
T 3u0b_A          409 GRRLNSLFQGGQPVDVAELIAYFASPASNAVTGNTIRVCGQAMLG  453 (454)
T ss_dssp             HHHSBTTSSCBCHHHHHHHHHHHHCGGGTTCCSCEEEESSSBSCC
T ss_pred             HHhhccccCCCCHHHHHHHHHHHhCCccCCCCCcEEEECCccccc
Confidence            334557778899999999999999999999999999999998753

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=6.9e-33  Score=228.63  Aligned_cols=208  Identities=19%  Similarity=0.190  Sum_probs=169.0

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHH-hCCccEEEeCCC--CC-----CCCCCCCCCHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH-FGKLDILVNAAA--GN-----FLVPAEDLSPNGFR   73 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~-~g~id~li~~ag--~~-----~~~~~~~~~~~~~~   73 (257)
                      +|++++++++.+++.+.+.++.++.+|++|+++++++++++.++ +|++|+||||||  +.     ...++.+.+.++|+
T Consensus        36 ~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~  115 (260)
T 2qq5_A           36 GRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWD  115 (260)
T ss_dssp             ESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHH
T ss_pred             eCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHH
Confidence            68889999999998877778999999999999999999999887 899999999995  32     34677888999999


Q ss_pred             HHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeE
Q 025124           74 TVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIR  153 (257)
Q Consensus        74 ~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~  153 (257)
                      .++++|+.++++++++++|.|.+++        .|+||++||..+..+. +...|+++|+++++|+++++.|+. ++||+
T Consensus       116 ~~~~~n~~~~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~-~~~~Y~asK~a~~~~~~~la~e~~-~~gi~  185 (260)
T 2qq5_A          116 DINNVGLRGHYFCSVYGARLMVPAG--------QGLIVVISSPGSLQYM-FNVPYGVGKAACDKLAADCAHELR-RHGVS  185 (260)
T ss_dssp             HHHTTTTHHHHHHHHHHHHHHGGGT--------CCEEEEECCGGGTSCC-SSHHHHHHHHHHHHHHHHHHHHHG-GGTCE
T ss_pred             HHHhhcchhHHHHHHHHHHHHhhcC--------CcEEEEEcChhhcCCC-CCCchHHHHHHHHHHHHHHHHHhc-cCCeE
Confidence            9999999999999999999998876        6899999999887654 357899999999999999999999 89999


Q ss_pred             EEEEecCcccCCCCCCCCChHHHH-HH-hh-hhccCCCCCCHHhHHHHHHHhccCCC-CcccCcEEEecC
Q 025124          154 VNGIAPGPIKDTAGVSKLAPEEIR-SK-AT-DYMAAYKFGEKWDIAMAALYLASDAG-KYVNGNTLIVDG  219 (257)
Q Consensus       154 v~~v~Pg~v~t~~~~~~~~~~~~~-~~-~~-~~~~~~~~~~~~dva~~~~~l~~~~~-~~~~G~~~~~dg  219 (257)
                      ||+|+||+++|++........... .. .. ...+.++..+|+|+|+.++||+++.+ .+++|+.+.+++
T Consensus       186 v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~v~~l~s~~~~~~itG~~i~~~~  255 (260)
T 2qq5_A          186 CVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALATDPNILSLSGKVLPSCD  255 (260)
T ss_dssp             EEEEECCCSCTTTC----------------------CHHHHHHHHHHHHHHHHTCTTGGGGTTCEEEHHH
T ss_pred             EEEEecCccccHHHHHhhccccccchhHHHHHHhhhccCCCHHHHHHHHHHHhcCcccccccceeechhh
Confidence            999999999999754322111110 00 00 11234455789999999999999876 489999998763

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=2.6e-31  Score=221.00  Aligned_cols=213  Identities=25%  Similarity=0.293  Sum_probs=180.8

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC--CCCCCCCHHHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL--VPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n   79 (257)
                      +|+.++++++.+++.. ..++.++.+|++|+++++.+++++.++++++|+||||||....  .++.+.+.++|+..+++|
T Consensus        47 ~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n  125 (278)
T 2bgk_A           47 DIADDHGQKVCNNIGS-PDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDIN  125 (278)
T ss_dssp             ESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHH
T ss_pred             cCChhHHHHHHHHhCC-CCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHh
Confidence            5777777777666633 2379999999999999999999999999999999999997643  577889999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccc-cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~-~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      +.+++.+++++++.|.+++        .|+||++||..+..+.+ +...|+++|++++.|+++++.|+. ++||++++|+
T Consensus       126 ~~~~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~  196 (278)
T 2bgk_A          126 VYGAFLVAKHAARVMIPAK--------KGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELG-EYGIRVNCVS  196 (278)
T ss_dssp             THHHHHHHHHHHHHHGGGT--------CEEEEEECCGGGTCCCTTSCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHhhcC--------CCeEEEEeeccccCCCCCCCcchHHHHHHHHHHHHHHHHHHh-hcCcEEEEEE
Confidence            9999999999999999866        78999999999988877 788999999999999999999998 8899999999


Q ss_pred             cCcccCCCCCCCCC-hHHHHHHhhhh--ccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          159 PGPIKDTAGVSKLA-PEEIRSKATDY--MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       159 Pg~v~t~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      ||++.|++...... .......+...  .+.+++.+|+|+|+.+++++++.+.+++|+.+.+|||..+.
T Consensus       197 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~  265 (278)
T 2bgk_A          197 PYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRT  265 (278)
T ss_dssp             ESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             eceecchhhhhhcccchhHHHHhhhcccccccccCCHHHHHHHHHHHcCcccccCCCCEEEECCccccc
Confidence            99999997654322 12222222222  24567899999999999999988889999999999997664

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=2.1e-32  Score=225.06  Aligned_cols=213  Identities=22%  Similarity=0.341  Sum_probs=183.6

Q ss_pred             CCc-HHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCC-CCCCCCCCCCHHHHHHHHHHH
Q 025124            2 GRR-KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG-NFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         2 ~r~-~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      +|+ +++++++.+++...+.++.++.+|++|+++++++++++.++++++|+||||||. ....++.+.+.++|+.++++|
T Consensus        38 ~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n  117 (258)
T 3afn_B           38 GRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDAN  117 (258)
T ss_dssp             ESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred             CCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhc
Confidence            566 677888888888777789999999999999999999999999999999999997 666778888999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcC--CCCCCCCCCceEEEEccccccc-ccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEE
Q 025124           80 SVGTFIMCHEALKYLKKGG--RGQASSSSGGIIINISATLHYT-ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~--~~~~~~~~~g~ii~iss~~~~~-~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~  156 (257)
                      +.+++.++++++|.|.++.  .+.     .++||++||..+.. +.++...|+++|++++.|+++++.|+. ++||++++
T Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~e~~-~~gi~v~~  191 (258)
T 3afn_B          118 IRSVVMTTKFALPHLAAAAKASGQ-----TSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVDFHT-KDGVRFNI  191 (258)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHTS-----CEEEEEECCTHHHHCCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEE
T ss_pred             cHHHHHHHHHHHHHHHhcccCCCC-----CcEEEEecchhhccCCCCCchHHHHHHHHHHHHHHHHHHhhc-ccCeEEEE
Confidence            9999999999999997542  000     38999999998887 778889999999999999999999998 88999999


Q ss_pred             EecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCC-cccCcEEEecCCcc
Q 025124          157 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK-YVNGNTLIVDGGNW  222 (257)
Q Consensus       157 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~-~~~G~~~~~dgg~~  222 (257)
                      |+||++.|++....  ............+.+++.+|+|+|+.+++++++... +++|+.+.++||..
T Consensus       192 v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~~  256 (258)
T 3afn_B          192 VSPGTVDTAFHADK--TQDVRDRISNGIPMGRFGTAEEMAPAFLFFASHLASGYITGQVLDINGGQY  256 (258)
T ss_dssp             EEECSBSSGGGTTC--CHHHHHHHHTTCTTCSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTSS
T ss_pred             EeCCCccccccccc--CHHHHHHHhccCCCCcCCCHHHHHHHHHHHhCcchhccccCCEEeECCCcc
Confidence            99999999875432  233344445556778899999999999999987666 89999999999964

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=1.1e-32  Score=251.38  Aligned_cols=195  Identities=23%  Similarity=0.301  Sum_probs=168.7

Q ss_pred             CcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHH
Q 025124            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG   82 (257)
Q Consensus         3 r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~   82 (257)
                      |+.++++++.+++.+.+.++   .+|++|.++++++++++.+++|+||+||||||+....++.+.+.++|++++++|+.|
T Consensus        49 r~~~~~~~~~~~i~~~g~~~---~~d~~d~~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g  125 (604)
T 2et6_A           49 GNSKAADVVVDEIVKNGGVA---VADYNNVLDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNG  125 (604)
T ss_dssp             ---CHHHHHHHHHHHTTCEE---EEECCCTTCHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHH
T ss_pred             cchHHHHHHHHHHHhcCCeE---EEEcCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHH
Confidence            45578888899998776554   368888888999999999999999999999998877889999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcc
Q 025124           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (257)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v  162 (257)
                      +++++++++|+|++++        .|+||++||..+..+.++.+.|++||+|+.+|+++|+.|+. ++||+||+|+|| +
T Consensus       126 ~~~~~~a~~p~m~~~~--------~G~IVnisS~ag~~~~~~~~~Y~asKaal~~lt~~la~El~-~~gIrVn~v~Pg-~  195 (604)
T 2et6_A          126 AFAVTKAAWPYFQKQK--------YGRIVNTSSPAGLYGNFGQANYASAKSALLGFAETLAKEGA-KYNIKANAIAPL-A  195 (604)
T ss_dssp             HHHHHHHHHHHHHHHT--------CEEEEEECCHHHHHCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC-C
T ss_pred             HHHHHHHHHHHHHHcC--------CCEEEEECCHHHcCCCCCchHHHHHHHHHHHHHHHHHHHhC-ccCeEEEEEccC-C
Confidence            9999999999999876        79999999999999999999999999999999999999999 999999999998 5


Q ss_pred             cCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          163 KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       163 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      .|+|...... .+.          ....+|+|++..++||+++. .+++|+.+.+|||..
T Consensus       196 ~T~m~~~~~~-~~~----------~~~~~pe~vA~~v~~L~s~~-~~itG~~~~vdgG~~  243 (604)
T 2et6_A          196 RSRMTESIMP-PPM----------LEKLGPEKVAPLVLYLSSAE-NELTGQFFEVAAGFY  243 (604)
T ss_dssp             CCHHHHTTSC-HHH----------HTTCSHHHHHHHHHHHTSSS-CCCCSCEEEEETTEE
T ss_pred             cCccccccCC-hhh----------hccCCHHHHHHHHHHHhCCc-ccCCCCEEEECCCeE
Confidence            7765322111 111          12369999999999999988 899999999999964

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=5e-33  Score=233.80  Aligned_cols=182  Identities=26%  Similarity=0.246  Sum_probs=158.6

Q ss_pred             HHHHHHHHHHHHHHhCCccEEEeCCCCCC--CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCce
Q 025124           32 REDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGI  109 (257)
Q Consensus        32 ~~~~~~~~~~~~~~~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~  109 (257)
                      +++++++++++.+++|++|+||||||+..  ..++.+.+.++|++++++|+.++++++++++|+|++          .|+
T Consensus       103 ~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~----------~g~  172 (297)
T 1d7o_A          103 NWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNP----------GGA  172 (297)
T ss_dssp             CCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE----------EEE
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhcc----------Cce
Confidence            66899999999999999999999999653  567788999999999999999999999999999965          478


Q ss_pred             EEEEcccccccccccc-hhhHHHHHHHHHHHHHHHHHhcCC-CCeEEEEEecCcccCCCCCCCCChHHHHHHhhhhccCC
Q 025124          110 IINISATLHYTATWYQ-IHVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY  187 (257)
Q Consensus       110 ii~iss~~~~~~~~~~-~~Y~~sK~a~~~l~~~la~e~~~~-~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  187 (257)
                      ||++||..+..+.+++ ..|+++|+|+++|+++++.|+. + +||+||+|+||+++|++.......+..........+++
T Consensus       173 iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~  251 (297)
T 1d7o_A          173 SISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAG-RKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQ  251 (297)
T ss_dssp             EEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHH-HHHCCEEEEEEECCCBCCCSSCCSHHHHHHHHHHHHSSSC
T ss_pred             EEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhC-cccCcEEEEEeccccccchhhhccccHHHHHHhhccCCCC
Confidence            9999999999888887 6999999999999999999997 6 79999999999999997644221233334444556888


Q ss_pred             CCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          188 KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       188 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      ++.+|+|+|+.+++|+++.+.+++|+.+.+|||+.+.
T Consensus       252 r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~~~  288 (297)
T 1d7o_A          252 KTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSM  288 (297)
T ss_dssp             CCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCceee
Confidence            8999999999999999988899999999999997664

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=9e-32  Score=223.22  Aligned_cols=209  Identities=24%  Similarity=0.402  Sum_probs=183.5

Q ss_pred             CC-cHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            2 GR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r-~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      +| +.++++++.+++.+.+.++.++.+|++|+++++++++++.++++++|++|||||.....++.+.+.++|+..+++|+
T Consensus        52 ~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~  131 (274)
T 1ja9_A           52 YGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNT  131 (274)
T ss_dssp             ESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             cCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHH
Confidence            45 77888888888888788899999999999999999999999999999999999987777788899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccc-cccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~-~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      .+++++++++++.|++          +++||++||..+. .+.++...|+++|++++.|+++++.|+. ++||++++|+|
T Consensus       132 ~~~~~l~~~~~~~~~~----------~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~e~~-~~gi~v~~v~P  200 (274)
T 1ja9_A          132 RGQFFVAQQGLKHCRR----------GGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCG-AKGVTVNCIAP  200 (274)
T ss_dssp             HHHHHHHHHHHHHEEE----------EEEEEEECCGGGTCCSCCSCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEE
T ss_pred             HHHHHHHHHHHHHHhh----------CCEEEEEcChHhccCCCCCCchHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEee
Confidence            9999999999999873          5789999999888 7778889999999999999999999998 88999999999


Q ss_pred             CcccCCCCCC-----------CCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          160 GPIKDTAGVS-----------KLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       160 g~v~t~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                      |++.|++...           ..........+....+.+++.+|+|+|+++++++++...+++|+.+.++||.
T Consensus       201 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG~  273 (274)
T 1ja9_A          201 GGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGGG  273 (274)
T ss_dssp             CCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CcccccchhcccccccccccccCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCcccccccCcEEEecCCc
Confidence            9999886431           1111333444455667788999999999999999988888999999999995

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=8e-32  Score=245.76  Aligned_cols=211  Identities=24%  Similarity=0.307  Sum_probs=174.7

Q ss_pred             HHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHH
Q 025124            8 LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC   87 (257)
Q Consensus         8 l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~   87 (257)
                      ++++.+++.+.+.++..+.+|++  ++.+++++++.+++|+||+||||||+....++.+.+.++|++++++|+.|++.++
T Consensus       357 ~~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~  434 (604)
T 2et6_A          357 ATKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLS  434 (604)
T ss_dssp             CHHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHH
T ss_pred             HHHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence            45667777777777888889984  5567889999999999999999999887788999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCC
Q 025124           88 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG  167 (257)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~  167 (257)
                      ++++|+|++++        .|+||++||..+..+.+++..|++||+|+.+|+++|+.|+. ++|||||+|+||. .|+|.
T Consensus       435 ~~~~p~m~~~~--------~G~IVnisS~ag~~~~~~~~~Y~asKaal~~lt~~la~El~-~~gIrVn~v~PG~-~T~m~  504 (604)
T 2et6_A          435 RLAWPYFVEKQ--------FGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGA-KNNIKVNIVAPHA-ETAMT  504 (604)
T ss_dssp             HHHHHHHHHTT--------CEEEEEECCHHHHSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECC-CCCC-
T ss_pred             HHHHHHHHHcC--------CCEEEEECChhhccCCCCChhHHHHHHHHHHHHHHHHHHhC-ccCeEEEEEcCCC-CCccc
Confidence            99999999876        79999999999999999999999999999999999999999 9999999999995 88864


Q ss_pred             CCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC------------CCCCCcHHHHH
Q 025124          168 VSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS------------NPRDLPKEAVN  235 (257)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~------------~~~~~~~~~~~  235 (257)
                      ..... .+          .....+|+|+|..++||+++.+. ++|+.+.+|||....            ...|-++.+..
T Consensus       505 ~~~~~-~~----------~~~~~~pe~vA~~v~~L~s~~~~-itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~  572 (604)
T 2et6_A          505 LSIMR-EQ----------DKNLYHADQVAPLLVYLGTDDVP-VTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKE  572 (604)
T ss_dssp             -------------------CCSSCGGGTHHHHHHTTSTTCC-CCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHH
T ss_pred             cccCc-hh----------hccCCCHHHHHHHHHHHhCCccC-CCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHH
Confidence            32111 00          12346999999999999999888 999999999996542            12355555555


Q ss_pred             HHHHHHh
Q 025124          236 QLSRAVE  242 (257)
Q Consensus       236 ~~~~~~~  242 (257)
                      .+.+...
T Consensus       573 ~~~~i~~  579 (604)
T 2et6_A          573 HLNEITD  579 (604)
T ss_dssp             HHHHHTC
T ss_pred             HHHHHhc
Confidence            5555433

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=1.2e-31  Score=218.96  Aligned_cols=206  Identities=26%  Similarity=0.337  Sum_probs=172.8

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.+++.    .+.++.+|++|+++++++++    .++++|++|||||.....++.+.+.++|+..+++|+.
T Consensus        38 ~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~----~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~  109 (244)
T 3d3w_A           38 SRTQADLDSLVRECP----GIEPVCVDLGDWEATERALG----SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLR  109 (244)
T ss_dssp             ESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHT----TCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTH
T ss_pred             eCCHHHHHHHHHHcC----CCCEEEEeCCCHHHHHHHHH----HcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhH
Confidence            577777776655432    35677999999999988876    5689999999999877777888899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.+++++++.|.+++.       .|+||++||..+..+.++...|+++|++++.|+++++.|+. ++||++++|+||+
T Consensus       110 ~~~~~~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~v~Pg~  181 (244)
T 3d3w_A          110 AVIQVSQIVARGLIARGV-------PGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELG-PHKIRVNAVNPTV  181 (244)
T ss_dssp             HHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECC
T ss_pred             HHHHHHHHHHHHHHhCCC-------CcEEEEeCchhhccCCCCCchHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEecc
Confidence            999999999999987531       48999999999998888899999999999999999999998 8899999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +.|++.............+....+.+++.+|+|+|+.+++++++.+.+++|+.+.+|||.+.
T Consensus       182 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~  243 (244)
T 3d3w_A          182 VMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGGFWA  243 (244)
T ss_dssp             BTTTTHHHHSCSTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ccccchhhhccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCccC
Confidence            99987532111112223344556778899999999999999998778899999999999754

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=1.1e-31  Score=216.62  Aligned_cols=196  Identities=26%  Similarity=0.304  Sum_probs=167.7

Q ss_pred             HHHHHHHHhcCCCeEEEE----ccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC-CCCCCCCCCHHHHHHHHHHHhHHH
Q 025124            9 RSAVAALHSLGIPAIGLE----GDVRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGT   83 (257)
Q Consensus         9 ~~~~~~l~~~~~~~~~~~----~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~   83 (257)
                      ..++..+.+.|.++....    +|++|+++++++++++    +++|++|||||.. ...++.+.+.++|+..+++|+.++
T Consensus        20 ~~~a~~l~~~G~~V~~~~r~~~~D~~~~~~v~~~~~~~----g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~   95 (223)
T 3uce_A           20 AELAKQLESEHTIVHVASRQTGLDISDEKSVYHYFETI----GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGA   95 (223)
T ss_dssp             HHHHHHHCSTTEEEEEESGGGTCCTTCHHHHHHHHHHH----CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCEEEEecCCcccCCCCHHHHHHHHHHh----CCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeH
Confidence            355666666666655543    8999999999888754    8999999999977 567889999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccc
Q 025124           84 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK  163 (257)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~  163 (257)
                      +.++++++|+|++          .|+||++||..+..+.++...|+++|+++++|+++++.|+. +  |+||+|+||+++
T Consensus        96 ~~~~~~~~~~~~~----------~g~iv~~sS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~--i~vn~v~PG~v~  162 (223)
T 3uce_A           96 VLAAKHGARYLKQ----------GGSITLTSGMLSRKVVANTYVKAAINAAIEATTKVLAKELA-P--IRVNAISPGLTK  162 (223)
T ss_dssp             HHHHHHHGGGEEE----------EEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHT-T--SEEEEEEECSBC
T ss_pred             HHHHHHHHhhccC----------CeEEEEecchhhccCCCCchHHHHHHHHHHHHHHHHHHhhc-C--cEEEEEEeCCCc
Confidence            9999999999865          58899999999999999999999999999999999999997 5  999999999999


Q ss_pred             CCCCCCCCCh--HHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          164 DTAGVSKLAP--EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       164 t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      |++.......  ...........+.+++.+|+|+|++++++++  +.+++|+.+.+|||..+
T Consensus       163 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~--~~~~tG~~i~vdgG~~~  222 (223)
T 3uce_A          163 TEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFAIQ--NSYMTGTVIDVDGGALL  222 (223)
T ss_dssp             SGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHH--CTTCCSCEEEESTTGGG
T ss_pred             chhhhhcchhhHHHHHHHHhhcCCCCCccCHHHHHHHHHHHcc--CCCCCCcEEEecCCeec
Confidence            9876543321  2234455667788999999999999999997  47899999999999765

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.98  E-value=4.5e-33  Score=236.34  Aligned_cols=182  Identities=29%  Similarity=0.277  Sum_probs=130.0

Q ss_pred             HHHHHHHHHHHHHHhCCccEEEeCCCCCC--CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCce
Q 025124           32 REDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGI  109 (257)
Q Consensus        32 ~~~~~~~~~~~~~~~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~  109 (257)
                      +++++++++++.+++|+||+||||||+..  ..++.+.+.++|+.++++|+.++++++++++|+|.+          .|+
T Consensus       117 ~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~----------~g~  186 (319)
T 2ptg_A          117 GFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKE----------GGS  186 (319)
T ss_dssp             CCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE----------EEE
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHhc----------Cce
Confidence            45899999999999999999999999753  567888999999999999999999999999999965          488


Q ss_pred             EEEEcccccccccccc-hhhHHHHHHHHHHHHHHHHHhcCC-CCeEEEEEecCcccCCCCCCCCC--hH----HHHHHhh
Q 025124          110 IINISATLHYTATWYQ-IHVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAGVSKLA--PE----EIRSKAT  181 (257)
Q Consensus       110 ii~iss~~~~~~~~~~-~~Y~~sK~a~~~l~~~la~e~~~~-~gi~v~~v~Pg~v~t~~~~~~~~--~~----~~~~~~~  181 (257)
                      ||++||..+..+.+++ ..|+++|+|+++|+++++.|+. + +||+||+|+||+++|++......  ..    .....+.
T Consensus       187 Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  265 (319)
T 2ptg_A          187 ALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAG-RARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSE  265 (319)
T ss_dssp             EEEEEECC------------------THHHHHHHHHHHH-HHHCCEEEEEEECCCC------------------------
T ss_pred             EEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhc-cccCeeEEEEeeCCccChhhhhcccccchhhHHHHHHHHh
Confidence            9999999998888887 6899999999999999999997 6 79999999999999987543211  00    1111122


Q ss_pred             hhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          182 DYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       182 ~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      ...|++++.+|+|+|+.++||+++.+.+++|+.+.+|||+.+.
T Consensus       266 ~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~  308 (319)
T 2ptg_A          266 ANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLHAM  308 (319)
T ss_dssp             -------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCTTC
T ss_pred             ccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCceee
Confidence            3457788999999999999999998999999999999998764

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.98  E-value=5.2e-33  Score=235.59  Aligned_cols=182  Identities=26%  Similarity=0.249  Sum_probs=156.6

Q ss_pred             HHHHHHHHHHHHHHhCCccEEEeCCCCCC--CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCce
Q 025124           32 REDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGI  109 (257)
Q Consensus        32 ~~~~~~~~~~~~~~~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~  109 (257)
                      +++++.+++++.+++|++|+||||||+..  ..++.+.+.++|+.++++|+.+++.++++++|+|.+          .|+
T Consensus       104 ~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~----------~g~  173 (315)
T 2o2s_A          104 GYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNE----------GGS  173 (315)
T ss_dssp             CCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEEE----------EEE
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhc----------CCE
Confidence            66899999999999999999999999753  567888999999999999999999999999999865          488


Q ss_pred             EEEEcccccccccccc-hhhHHHHHHHHHHHHHHHHHhcCC-CCeEEEEEecCcccCCCCCCCCC------hHHHHHHhh
Q 025124          110 IINISATLHYTATWYQ-IHVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAGVSKLA------PEEIRSKAT  181 (257)
Q Consensus       110 ii~iss~~~~~~~~~~-~~Y~~sK~a~~~l~~~la~e~~~~-~gi~v~~v~Pg~v~t~~~~~~~~------~~~~~~~~~  181 (257)
                      ||++||..+..+.+++ ..|+++|+|+++|+++++.|+. + +||+||+|+||+++|++......      .......+.
T Consensus       174 Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  252 (315)
T 2o2s_A          174 AVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAG-QKYGVRVNAISAGPLKSRAASAIGKSGEKSFIDYAIDYSY  252 (315)
T ss_dssp             EEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHH-HHTCCEEEEEEECCCCCHHHHHTTCSSSSCHHHHHHHHHH
T ss_pred             EEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhC-cccCeEEEEEecccccchhhhhccccccchhHHHHHHHHh
Confidence            9999999998888877 5899999999999999999997 6 89999999999999986432110      012222233


Q ss_pred             hhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          182 DYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       182 ~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      ...|++++.+|+|+|+.++||+++.+.+++|+.+.+|||..+.
T Consensus       253 ~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  295 (315)
T 2o2s_A          253 NNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLHAM  295 (315)
T ss_dssp             HHSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             ccCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCeeee
Confidence            4568889999999999999999998999999999999997654

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.98  E-value=3.3e-31  Score=223.07  Aligned_cols=197  Identities=20%  Similarity=0.172  Sum_probs=166.1

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|+.++++++.+++.+.+.++.++.+|++|.++++++++++.+++|++|+||||||+....++.+.+.++|+.++++|+
T Consensus        61 ~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~  140 (301)
T 3tjr_A           61 SDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDL  140 (301)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHT
T ss_pred             EECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhh
Confidence            36899999999999998888999999999999999999999999999999999999988888889999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .|++.++++++|.|.+++.       .|+||++||..+..+.++.+.|++||+|+++|+++++.|+. +.||+|++|+||
T Consensus       141 ~g~~~l~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG  212 (301)
T 3tjr_A          141 WGSIHAVEAFLPRLLEQGT-------GGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVK-PNGIGVSVLCPM  212 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHCS-------CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEECCS
T ss_pred             HHHHHHHHHHHHHHHhcCC-------CcEEEEeCchhhcCCCCCchHHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEECC
Confidence            9999999999999987642       48999999999999999999999999999999999999999 899999999999


Q ss_pred             cccCCCCCCCCC--------hHHHHHHhhhhccCCCCCCHHhHHHHHHHhccC
Q 025124          161 PIKDTAGVSKLA--------PEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (257)
Q Consensus       161 ~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  205 (257)
                      +++|++......        .......+........+.+|+|+|+.++.++..
T Consensus       213 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~~  265 (301)
T 3tjr_A          213 VVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAILA  265 (301)
T ss_dssp             CCCSSHHHHHHHHC----------------------CCCHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccchhhccccChhhhccccccccCCCCHHHHHHHHHHHHhc
Confidence            999986531100        000000111111223467999999999999964

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.97  E-value=5.5e-31  Score=223.30  Aligned_cols=197  Identities=20%  Similarity=0.230  Sum_probs=171.2

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.+++.+.+..   +.+|+++.++++++++++.++++++|+||||||+....++.+.+.++|+.++++|+.
T Consensus        49 ~R~~~~~~~~~~~l~~~~~~---~~~D~~~~~~~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~  125 (319)
T 1gz6_A           49 GKGSSAADKVVEEIRRRGGK---AVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLR  125 (319)
T ss_dssp             BCCSHHHHHHHHHHHHTTCE---EEEECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHhhCCe---EEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            57888999999998876543   358999999999999999999999999999999887777888999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      |+++++++++|+|++++        .|+||++||..+..+.+++..|+++|+++++|+++++.|+. ++||+||+|+||+
T Consensus       126 g~~~l~~~~~~~m~~~~--------~grIV~vsS~~~~~~~~~~~~Y~aSK~a~~~~~~~la~el~-~~gI~vn~v~PG~  196 (319)
T 1gz6_A          126 GSFQVTRAAWDHMKKQN--------YGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGR-KNNIHCNTIAPNA  196 (319)
T ss_dssp             HHHHHHHHHHHHHHHHT--------CEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHcC--------CCEEEEECChhhccCCCCCHHHHHHHHHHHHHHHHHHHHhc-ccCEEEEEEeCCC
Confidence            99999999999999876        69999999999988888999999999999999999999999 8999999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      + |++...... ....          ...+|+|+|..++||+++ ..+++|+.+.+|||...
T Consensus       197 ~-t~~~~~~~~-~~~~----------~~~~p~dvA~~~~~l~s~-~~~~tG~~~~v~GG~~~  245 (319)
T 1gz6_A          197 G-SRMTETVMP-EDLV----------EALKPEYVAPLVLWLCHE-SCEENGGLFEVGAGWIG  245 (319)
T ss_dssp             C-STTTGGGSC-HHHH----------HHSCGGGTHHHHHHHTST-TCCCCSCEEEEETTEEE
T ss_pred             c-cccccccCC-hhhh----------ccCCHHHHHHHHHHHhCc-hhhcCCCEEEECCCeEE
Confidence            8 765432111 1111          136899999999999987 45789999999999653

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.97  E-value=2.1e-31  Score=215.84  Aligned_cols=194  Identities=17%  Similarity=0.155  Sum_probs=159.6

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|+.++++++.+++   +.++.++.+|+++.++++++++++.+   ..|++|||||.....++.+.+.++|++.+++|+
T Consensus        31 ~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~---~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~  104 (230)
T 3guy_A           31 TGRSESKLSTVTNCL---SNNVGYRARDLASHQEVEQLFEQLDS---IPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNL  104 (230)
T ss_dssp             EESCHHHHHHHHHTC---SSCCCEEECCTTCHHHHHHHHHSCSS---CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHH
T ss_pred             EeCCHHHHHHHHHHH---hhccCeEeecCCCHHHHHHHHHHHhh---cCCEEEEeCCcCCCCccccCCHHHHHHHHHHHH
Confidence            368888888776655   56789999999999999999887754   349999999988888899999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .+++.++++++|.|.+++         ++||++||..+..+.++...|+++|+|+++|+++++.|+. ++||+|++|+||
T Consensus       105 ~g~~~l~~~~~~~~~~~~---------~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG  174 (230)
T 3guy_A          105 SSAINVLRELVKRYKDQP---------VNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELK-GKPMKIIAVYPG  174 (230)
T ss_dssp             HHHHHHHHHHHHHHTTSC---------CEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTT-TSSCEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHhCC---------CeEEEEeecccCCCCCCCchhHHHHHHHHHHHHHHHHHHH-hcCeEEEEEECC
Confidence            999999999999998763         5899999999999999999999999999999999999999 899999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhcc-CCCCcccCcEEEecCC
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS-DAGKYVNGNTLIVDGG  220 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~G~~~~~dgg  220 (257)
                      ++.|++.....          ...+..++.+|+|+|+.++++++ +...+++|+.+..+..
T Consensus       175 ~v~t~~~~~~~----------~~~~~~~~~~~~dvA~~i~~l~~~~~~~~itg~~~~~~~~  225 (230)
T 3guy_A          175 GMATEFWETSG----------KSLDTSSFMSAEDAALMIHGALANIGNGYVSDITVNREGH  225 (230)
T ss_dssp             CC--------------------------CCCHHHHHHHHHHHCCEETTEEEEEEEEEC---
T ss_pred             cccChHHHhcC----------CCCCcccCCCHHHHHHHHHHHHhCcCCCCccceeecCCCC
Confidence            99998653221          22345678999999999999987 6778899999988765

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.97  E-value=9.7e-31  Score=213.50  Aligned_cols=206  Identities=23%  Similarity=0.297  Sum_probs=173.3

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.+++    ..+.++.+|++|+++++++++    .++++|+||||||.....++.+.+.++|+..+++|+.
T Consensus        38 ~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~----~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~  109 (244)
T 1cyd_A           38 TRTNSDLVSLAKEC----PGIEPVCVDLGDWDATEKALG----GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLR  109 (244)
T ss_dssp             ESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHT----TCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTH
T ss_pred             eCCHHHHHHHHHhc----cCCCcEEecCCCHHHHHHHHH----HcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhH
Confidence            57777776655442    246677999999999988876    5689999999999877777888999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.+++++++.|.+++.       .++||++||..+..+.++...|+++|++++.|+++++.|+. ++||++++|+||+
T Consensus       110 g~~~l~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~-~~gi~v~~v~pg~  181 (244)
T 1cyd_A          110 SVFQVSQMVARDMINRGV-------PGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELG-PHKIRVNSVNPTV  181 (244)
T ss_dssp             HHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECC
T ss_pred             HHHHHHHHHHHHHHhCCC-------CeEEEEEcchhhcCCCCCcchhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecCc
Confidence            999999999999987531       38999999999998888899999999999999999999998 8899999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +.|++.............+....+..++.+++|+++++++++++.+.+++|+.+.+|||..+
T Consensus       182 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~  243 (244)
T 1cyd_A          182 VLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGGILVDAGYLA  243 (244)
T ss_dssp             BTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSSEEEESTTGGG
T ss_pred             ccCccccccccCHHHHHHHHhcCCccCCCCHHHHHHHHHHHhCchhhcccCCEEEECCCccC
Confidence            99886432222233334445556778899999999999999998888899999999999653

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.97  E-value=4.2e-31  Score=216.65  Aligned_cols=186  Identities=23%  Similarity=0.303  Sum_probs=159.3

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      ++.++ +|+  .++++.+++++    .++|+||||||.....++.+.+.++|+..+++|+.+++.++++++|.|++++  
T Consensus        61 ~~~~~-~D~--~~~~~~~~~~~----~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--  131 (249)
T 1o5i_A           61 HRYVV-CDL--RKDLDLLFEKV----KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG--  131 (249)
T ss_dssp             SEEEE-CCT--TTCHHHHHHHS----CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--
T ss_pred             CeEEE-eeH--HHHHHHHHHHh----cCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--
Confidence            56667 999  55666666654    4899999999987777888999999999999999999999999999999876  


Q ss_pred             CCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHHH-H
Q 025124          101 QASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS-K  179 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~-~  179 (257)
                            .|+||++||..+..+.++...|+++|+++++|+++++.|+. ++||++++|+||+++|++.....  ..... .
T Consensus       132 ------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~  202 (249)
T 1o5i_A          132 ------WGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVA-PYGITVNCVAPGWTETERVKELL--SEEKKKQ  202 (249)
T ss_dssp             ------CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCTTHHHHS--CHHHHHH
T ss_pred             ------CcEEEEEcchHhcCCCCCCchHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCCCccCcccccc--hhhHHHH
Confidence                  68999999999999989999999999999999999999999 89999999999999998742211  11222 3


Q ss_pred             hhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          180 ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       180 ~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      +....+.+++.+|+|+|+.+++|+++.+.+++|+.+.+|||....
T Consensus       203 ~~~~~p~~~~~~~~dvA~~i~~l~s~~~~~~tG~~~~vdgG~~~~  247 (249)
T 1o5i_A          203 VESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGGLSKF  247 (249)
T ss_dssp             HHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCCCC
T ss_pred             HHhcCCCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCcccC
Confidence            444567788999999999999999988899999999999997653

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.97  E-value=1.3e-31  Score=229.42  Aligned_cols=204  Identities=12%  Similarity=0.026  Sum_probs=169.7

Q ss_pred             HHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC-------------CCCCC-------------
Q 025124           11 AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN-------------FLVPA-------------   64 (257)
Q Consensus        11 ~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~-------------~~~~~-------------   64 (257)
                      +.+++.+.|.++..+.+|++|+++++++++++.+++|+||+||||||..             ...++             
T Consensus       100 ~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~  179 (405)
T 3zu3_A          100 FHKFAAQKGLYAKSINGDAFSDEIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDK  179 (405)
T ss_dssp             HHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTT
T ss_pred             HHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccc
Confidence            4446667788899999999999999999999999999999999999974             23444             


Q ss_pred             --------CCCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccc--hhhHHHHH
Q 025124           65 --------EDLSPNGFRTVIEIDSVGTF-IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ--IHVSAAKA  133 (257)
Q Consensus        65 --------~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~--~~Y~~sK~  133 (257)
                              .+.+.++|++++++|..+.+ .+++++.+.+....        +|+||++||..+..+.+.+  +.|++||+
T Consensus       180 ~~~~~~~i~~~t~ee~~~~v~Vn~~~~~~~~~~~~~~~~m~~~--------gG~IVniSSi~~~~~~p~~~~~aY~AaKa  251 (405)
T 3zu3_A          180 EVIKESVLQPATQSEIDSTVAVMGGEDWQMWIDALLDAGVLAE--------GAQTTAFTYLGEKITHDIYWNGSIGAAKK  251 (405)
T ss_dssp             TEEEEEEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCEEE--------EEEEEEEECCCCGGGTTTTTTSHHHHHHH
T ss_pred             cccccccCCCCCHHHHHHHHHhhchhHHHHHHHHHHHHhhhhC--------CcEEEEEeCchhhCcCCCccchHHHHHHH
Confidence                    77899999999999999998 78888776533333        6899999999999998887  99999999


Q ss_pred             HHHHHHHHHHHHhcCCC-CeEEEEEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccC
Q 025124          134 AVDSITRSLALEWGTDY-AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNG  212 (257)
Q Consensus       134 a~~~l~~~la~e~~~~~-gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  212 (257)
                      ++.+|+++|+.|++ ++ |||||+|+||++.|++................  ++++.++|||+++.+.+|+++   ++.|
T Consensus       252 al~~ltrsLA~Ela-~~~GIRVNaVaPG~i~T~~s~~ip~~p~y~~~l~~--~mkr~G~~Ed~a~~i~~L~sd---~l~~  325 (405)
T 3zu3_A          252 DLDQKVLAIRESLA-AHGGGDARVSVLKAVVSQASSAIPMMPLYLSLLFK--VMKEKGTHEGCIEQVYSLYKD---SLCG  325 (405)
T ss_dssp             HHHHHHHHHHHHHH-TTTSCEEEEEECCCCCCHHHHTSTTHHHHHHHHHH--HHHHHTCCCCHHHHHHHHHHH---TTSS
T ss_pred             HHHHHHHHHHHHhC-cccCeEEEEEEeCCCcCchhhcCCCCcHHHHHHHH--HHhcCCCcHHHHHHHHHHHhc---cccC
Confidence            99999999999999 99 99999999999999875544332222222222  567889999999999999987   5789


Q ss_pred             cEEEecCCcccCCCCC
Q 025124          213 NTLIVDGGNWLSNPRD  228 (257)
Q Consensus       213 ~~~~~dgg~~~~~~~~  228 (257)
                      ..+.+|++..++...|
T Consensus       326 ~~~~~D~~~~~r~d~~  341 (405)
T 3zu3_A          326 DSPHMDQEGRLRADYK  341 (405)
T ss_dssp             SCCCBCTTSCEECCHH
T ss_pred             CCCCcCCCcCCCCchh
Confidence            9999999877776554

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.97  E-value=7.4e-31  Score=226.59  Aligned_cols=217  Identities=15%  Similarity=0.053  Sum_probs=172.4

Q ss_pred             HHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHh-CCccEEEeCCCCC-------------CCCCC------------
Q 025124           11 AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGN-------------FLVPA------------   64 (257)
Q Consensus        11 ~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-g~id~li~~ag~~-------------~~~~~------------   64 (257)
                      +.+++.+.|.++..+.+|++++++++++++++.+++ |+||+||||||..             ...++            
T Consensus       114 ~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~  193 (422)
T 3s8m_A          114 FDKHAKAAGLYSKSINGDAFSDAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTN  193 (422)
T ss_dssp             HHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETT
T ss_pred             HHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccc
Confidence            446677778899999999999999999999999999 9999999999972             22344            


Q ss_pred             ---------CCCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccc--hhhHHHH
Q 025124           65 ---------EDLSPNGFRTVIEIDSVGTF-IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ--IHVSAAK  132 (257)
Q Consensus        65 ---------~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~--~~Y~~sK  132 (257)
                               .+.+.++|+.++++|..+.+ .+++++++.+...+        +|+||++||.++..+.+.+  +.|++||
T Consensus       194 ~~~~~~~~~~~~t~e~~~~~v~Vn~~~~~~~~~~a~~~~~m~~~--------gG~IVniSSi~g~~~~p~~~~~aY~ASK  265 (422)
T 3s8m_A          194 KDTIIQASIEPASAQEIEDTITVMGGQDWELWIDALEGAGVLAD--------GARSVAFSYIGTEITWPIYWHGALGKAK  265 (422)
T ss_dssp             TTEEEEEEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEE--------EEEEEEEEECCCGGGHHHHTSHHHHHHH
T ss_pred             cccccccccCCCCHHHHHHHHHhhchhHHHHHHHHHHHHHHhhC--------CCEEEEEeCchhhccCCCccchHHHHHH
Confidence                     36899999999999999987 78888876543333        6899999999999888877  9999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCccc-
Q 025124          133 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVN-  211 (257)
Q Consensus       133 ~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~-  211 (257)
                      +|+.+|+++|+.|++ ++|||||+|+||++.|++............  ....++++.++|||+++.+.||+++.- |.+ 
T Consensus       266 aAl~~lTrsLA~Ela-~~GIRVNaVaPG~i~T~~~~~ip~~~~~~~--~~~~~m~r~G~pEdva~~v~~L~sd~l-y~~~  341 (422)
T 3s8m_A          266 VDLDRTAQRLNARLA-KHGGGANVAVLKSVVTQASAAIPVMPLYIS--MVYKIMKEKGLHEGTIEQLDRLFRERL-YRQD  341 (422)
T ss_dssp             HHHHHHHHHHHHHHH-TTTCEEEEEEECCCCCTTGGGSTHHHHHHH--HHHHHHHHTTCCCCHHHHHHHHHHHTT-TCTT
T ss_pred             HHHHHHHHHHHHHhC-ccCEEEEEEEcCCCcChhhhcCCCChHHHH--HHHhhhcCCcChHHHHHHHHHHhcchh-hccC
Confidence            999999999999999 999999999999999997644322121111  122367889999999999999998743 544 


Q ss_pred             CcEEEecCCcccCCCCC-CcHHHHHHHHH
Q 025124          212 GNTLIVDGGNWLSNPRD-LPKEAVNQLSR  239 (257)
Q Consensus       212 G~~~~~dgg~~~~~~~~-~~~~~~~~~~~  239 (257)
                      |+...+|++..++...| +.+....+...
T Consensus       342 ~~~~~~d~~~~~r~d~~e~~~~~q~~~~~  370 (422)
T 3s8m_A          342 GQPAEVDEQNRLRLDDWELRDDVQDACKA  370 (422)
T ss_dssp             CCCCCCCTTSCEESCTTTTSHHHHHHHHH
T ss_pred             CCCcccCCCCCCccchhhCCHHHHHHHHH
Confidence            77766887766665555 44555544443

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.97  E-value=7.6e-30  Score=207.05  Aligned_cols=193  Identities=24%  Similarity=0.332  Sum_probs=160.4

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.+++.    ++.++.+|++|.++++++++++.+.++++|++|||||.....++.+.+.++|+..+++|+.
T Consensus        36 ~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~  111 (234)
T 2ehd_A           36 ARDEKRLQALAAELE----GALPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLT  111 (234)
T ss_dssp             ESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTH
T ss_pred             ECCHHHHHHHHHHhh----hceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhH
Confidence            577777777665542    6889999999999999999999999999999999999877778888999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.+++.+++.|++++        .++||++||..+..+.++...|+++|++++.|+++++.|+. ++||++++|+||+
T Consensus       112 ~~~~~~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~  182 (234)
T 2ehd_A          112 GAFLGIRHAVPALLRRG--------GGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLR-EANVRVVNVLPGS  182 (234)
T ss_dssp             HHHHHHHHHHHHHHTTT--------CEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEECC-
T ss_pred             HHHHHHHHHHHHHHhCC--------CcEEEEECCchhcCCCCCCchhhHHHHHHHHHHHHHHHHHh-hcCcEEEEEEeCC
Confidence            99999999999999865        68999999999998888899999999999999999999998 8899999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCC
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG  220 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg  220 (257)
                      ++|++....  ..    .+       ...+|+|+|+.+++++++++.+++|+.+..+++
T Consensus       183 v~t~~~~~~--~~----~~-------~~~~~~dvA~~~~~l~~~~~~~~~g~~~~~~~~  228 (234)
T 2ehd_A          183 VDTGFAGNT--PG----QA-------WKLKPEDVAQAVLFALEMPGHAMVSEIELRPTR  228 (234)
T ss_dssp             ----------------------------CCHHHHHHHHHHHHHSCCSSCCCEEECCC--
T ss_pred             CcCCccccc--cc----cc-------CCCCHHHHHHHHHHHhCCCcccccceEEEeecC
Confidence            998864321  00    00       147999999999999999889999987766554

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=1.4e-29  Score=210.82  Aligned_cols=211  Identities=22%  Similarity=0.224  Sum_probs=172.0

Q ss_pred             CCcHHHHHHHHHHHHhcC--CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~--~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      +|+.++++++.+++.+.+  .++.++.+|++|+++++.+++++.++++++|+||||||.....++.+.+.++|+..+++|
T Consensus        63 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N  142 (279)
T 1xg5_A           63 ARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVN  142 (279)
T ss_dssp             ESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHH
T ss_pred             ECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHH
Confidence            688889999988888765  468889999999999999999999999999999999998877888899999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccc--cccccchhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEE
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY--TATWYQIHVSAAKAAVDSITRSLALEWG-TDYAIRVNG  156 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~--~~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~~gi~v~~  156 (257)
                      +.+++.+++.+++.|++++.      ..|+||++||..+.  .+.++...|+++|++++.|+++++.|+. .+.||++++
T Consensus       143 ~~~~~~~~~~~l~~~~~~~~------~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~  216 (279)
T 1xg5_A          143 VLALSICTREAYQSMKERNV------DDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATC  216 (279)
T ss_dssp             THHHHHHHHHHHHHHHHTTC------CSCEEEEECCGGGTSCCSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred             hHHHHHHHHHHHHHHHhcCC------CCceEEEEcChhhcccCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEE
Confidence            99999999999999997640      02899999999887  5677788999999999999999999985 246899999


Q ss_pred             EecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCC
Q 025124          157 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG  220 (257)
Q Consensus       157 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg  220 (257)
                      |+||++.|++.........  .......+..++.+|+|+|+.++++++++..+.+|.....++|
T Consensus       217 v~Pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~dvA~~i~~l~~~~~~~~~g~i~i~~~~  278 (279)
T 1xg5_A          217 ISPGVVETQFAFKLHDKDP--EKAAATYEQMKCLKPEDVAEAVIYVLSTPAHIQIGDIQMRPTG  278 (279)
T ss_dssp             EEESCBCSSHHHHHTTTCH--HHHHHHHC---CBCHHHHHHHHHHHHHSCTTEEEEEEEEEETT
T ss_pred             EecCcccchhhhhhcccCh--hHHhhhcccccCCCHHHHHHHHHHHhcCCcceEeeeEEEccCC
Confidence            9999999986321111111  1111223345678999999999999998877777765555444

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.97  E-value=2.1e-30  Score=237.09  Aligned_cols=196  Identities=23%  Similarity=0.239  Sum_probs=158.0

Q ss_pred             CcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHH
Q 025124            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG   82 (257)
Q Consensus         3 r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~   82 (257)
                      ++.++++++.+++.+.+..+   .+|+++.++++++++++.+++|+||+||||||+....++.+.+.++|+.++++|+.|
T Consensus        60 ~~~~~~~~~~~~i~~~~~~~---~~D~~d~~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g  136 (613)
T 3oml_A           60 ASQRAADIVVDEIRKAGGEA---VADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKG  136 (613)
T ss_dssp             ----CHHHHHHHHHHTTCCE---EECCCCGGGHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHhCCeE---EEEeCCHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHH
Confidence            36777888999998876654   379999999999999999999999999999999888899999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcc
Q 025124           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (257)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v  162 (257)
                      +++++++++|+|++++        .|+||++||.++..+.++...|++||+|+.+|+++++.|+. ++||+||+|+||++
T Consensus       137 ~~~l~~~~~p~m~~~~--------~g~IV~isS~a~~~~~~~~~~Y~asKaal~~lt~~la~e~~-~~gI~vn~v~Pg~~  207 (613)
T 3oml_A          137 SFKCTQAAFPYMKKQN--------YGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIEGA-RNNVLCNVIVPTAA  207 (613)
T ss_dssp             HHHHHHHHHHHHHTTT--------CEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC--
T ss_pred             HHHHHHHHHHHHHHcC--------CCEEEEECCHHHcCCCCCChHHHHHHHHHHHHHHHHHHHhC-ccCeEEEEEECCCC
Confidence            9999999999999876        79999999999999999999999999999999999999999 89999999999975


Q ss_pred             cCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          163 KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       163 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                       |++...... ...          .+..+|+|+|..++||+++. .+++|+.+.+|||+..
T Consensus       208 -t~~~~~~~~-~~~----------~~~~~pedvA~~v~~L~s~~-~~~tG~~i~vdGG~~~  255 (613)
T 3oml_A          208 -SRMTEGILP-DIL----------FNELKPKLIAPVVAYLCHES-CEDNGSYIESAAGWAT  255 (613)
T ss_dssp             -----CCCCC-HHH----------HTTCCGGGTHHHHHHTTSTT-CCCCSCEEEEETTEEE
T ss_pred             -Chhhhhccc-hhh----------hhcCCHHHHHHHHHHhcCCC-cCCCceEEEECCCeEE
Confidence             565543332 211          13468999999999999988 8899999999999654

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.97  E-value=7.2e-30  Score=212.78  Aligned_cols=204  Identities=23%  Similarity=0.240  Sum_probs=168.3

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.++   .+.++.++.+|++|.++++.+++++.++++++|+||||||.....++.+.+.++|+..+++|+.
T Consensus        36 ~r~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~  112 (281)
T 3m1a_A           36 ARRTEALDDLVAA---YPDRAEAISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVF  112 (281)
T ss_dssp             ESSGGGGHHHHHH---CTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTH
T ss_pred             eCCHHHHHHHHHh---ccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHH
Confidence            5677766665543   3567999999999999999999999999999999999999887788899999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      |++.++++++|.|++++        .|+||++||..+..+.++...|+++|+++++|+++++.|+. ++||++++|+||+
T Consensus       113 g~~~~~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~  183 (281)
T 3m1a_A          113 GPARLTRALLPQMRERG--------SGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVA-PFGIKVLIVEPGA  183 (281)
T ss_dssp             HHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECC
T ss_pred             HHHHHHHHHHHHHHhcC--------CCEEEEEcCccccCCCCCchHHHHHHHHHHHHHHHHHHHhh-ccCcEEEEEecCc
Confidence            99999999999999876        79999999999999999999999999999999999999999 8999999999999


Q ss_pred             ccCCCCCCCC------Ch---H--HHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCC
Q 025124          162 IKDTAGVSKL------AP---E--EIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG  220 (257)
Q Consensus       162 v~t~~~~~~~------~~---~--~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg  220 (257)
                      +.|++.....      ..   .  ..........+..++.+|+|+|++++++++.+.   .|..+.+.++
T Consensus       184 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~~---~~~~~~l~s~  250 (281)
T 3m1a_A          184 FRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAIRLALDTEK---TPLRLALGGD  250 (281)
T ss_dssp             BCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHHHHHHHHHSSS---CCSEEEESHH
T ss_pred             cccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHHHHHHHHhCCC---CCeEEecCch
Confidence            9998754221      00   1  111223334556678899999999999998653   3556666554

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=4.8e-30  Score=212.35  Aligned_cols=210  Identities=25%  Similarity=0.294  Sum_probs=168.0

Q ss_pred             CCcHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      +|+.++++++.+++.+.  +.++.++.+|++|+++++++++++.+++|++|+||||||...        .++|++.+++|
T Consensus        38 ~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~--------~~~~~~~~~~n  109 (267)
T 2gdz_A           38 DWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNN--------EKNWEKTLQIN  109 (267)
T ss_dssp             ESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCC--------SSSHHHHHHHH
T ss_pred             ECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC--------hhhHHHHHhHH
Confidence            68888888888777653  456889999999999999999999999999999999999642        45789999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHH--HHHhcCCCCeEEEEE
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL--ALEWGTDYAIRVNGI  157 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~l--a~e~~~~~gi~v~~v  157 (257)
                      +.+++.+++.+++.|.+++.+.     .|+||++||..+..+.++...|+++|+++++|++++  +.|+. +.||++++|
T Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~~ala~e~~-~~gi~v~~v  183 (267)
T 2gdz_A          110 LVSVISGTYLGLDYMSKQNGGE-----GGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLM-NSGVRLNAI  183 (267)
T ss_dssp             THHHHHHHHHHHHHHCGGGTCC-----CEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHhccCCC-----CCEEEEeCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHhc-cCCcEEEEE
Confidence            9999999999999998752111     489999999999998888999999999999999995  68888 899999999


Q ss_pred             ecCcccCCCCCCCCChHHH------HHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCC
Q 025124          158 APGPIKDTAGVSKLAPEEI------RSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPR  227 (257)
Q Consensus       158 ~Pg~v~t~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~  227 (257)
                      +||+++|++..........      ........+..++.+|+|+|+.+++|+++.  .++|+++.++||..+....
T Consensus       184 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~--~~~G~~~~v~gg~~~~~~~  257 (267)
T 2gdz_A          184 CPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDD--ALNGAIMKITTSKGIHFQD  257 (267)
T ss_dssp             EESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHHCT--TCSSCEEEEETTTEEEECC
T ss_pred             ecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHHHHHHHHHHHhcCc--CCCCcEEEecCCCcccccC
Confidence            9999999864321111110      011111122234679999999999999875  4899999999987554333

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.97  E-value=1.3e-29  Score=215.26  Aligned_cols=196  Identities=21%  Similarity=0.257  Sum_probs=159.2

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.+.+...+.++.++.+|++|+++++++++++.+++|++|+||||||+....++.+.+.++|+.++++|+.
T Consensus        41 ~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~  120 (324)
T 3u9l_A           41 GRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVL  120 (324)
T ss_dssp             TTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTH
T ss_pred             ccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhH
Confidence            57788999999888888889999999999999999999999999999999999999888888999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccc-cccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~-~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      |++.++++++|+|++++        .|+||++||..+..+ .++.+.|++||+|+++|+++++.|+. ++||+|++|+||
T Consensus       121 g~~~l~~a~lp~m~~~~--------~g~iV~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~el~-~~gI~v~~v~PG  191 (324)
T 3u9l_A          121 STQRVNRAALPHMRRQK--------HGLLIWISSSSSAGGTPPYLAPYFAAKAAMDAIAVQYARELS-RWGIETSIIVPG  191 (324)
T ss_dssp             HHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCCSSCHHHHHHHHHHHHHHHHHHHHHH-TTTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHhcC--------CCEEEEEecchhccCCCCcchhHHHHHHHHHHHHHHHHHHhh-hhCcEEEEEECC
Confidence            99999999999999876        799999999988844 46778999999999999999999999 899999999999


Q ss_pred             cccCCCCCCCC---C-hHHHHHHh------------hhhc--cCCCCCCHHhHHHHHHHhccCC
Q 025124          161 PIKDTAGVSKL---A-PEEIRSKA------------TDYM--AAYKFGEKWDIAMAALYLASDA  206 (257)
Q Consensus       161 ~v~t~~~~~~~---~-~~~~~~~~------------~~~~--~~~~~~~~~dva~~~~~l~~~~  206 (257)
                      ++.|++.....   . .......+            ....  ......+|+++|++++.++..+
T Consensus       192 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~~vA~aiv~~~~~~  255 (324)
T 3u9l_A          192 AFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAAIVPPDADVSLVADAIVRVVGTA  255 (324)
T ss_dssp             CC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHHHTSCTTCCTHHHHHHHHHHHTSC
T ss_pred             ccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCC
Confidence            99976543211   0 01111100            0000  1112368899999999998654

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.97  E-value=1.3e-29  Score=215.01  Aligned_cols=202  Identities=19%  Similarity=0.198  Sum_probs=161.0

Q ss_pred             CCCcHHHHHHHHHHHHhcCC--CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGI--PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI   78 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~--~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~   78 (257)
                      ++|+.++++++.+++...+.  ++.++.+|++|.++++++++++.+.++++|+||||||+....++.+.+.++|+.++++
T Consensus        38 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~  117 (319)
T 3ioy_A           38 ADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGV  117 (319)
T ss_dssp             EESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHH
Confidence            36899999999999987765  7999999999999999999999999999999999999888889999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      |+.|+++++++++|.|.++...  .....|+||++||..+..+.++...|++||+|+++|+++++.|+. +.||++++|+
T Consensus       118 N~~g~~~l~~~~~~~~~~~~~~--~~~~~g~iV~isS~a~~~~~~~~~~Y~aSKaal~~~~~~la~e~~-~~gi~v~~v~  194 (319)
T 3ioy_A          118 NLHGVVNGVTTFVPRMVERVKA--GEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSLL-KYEIGVSVLC  194 (319)
T ss_dssp             HTHHHHHHHHHHHHHHHHHHHT--TSCCCCEEEEECCGGGTCCCSSSHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEC
T ss_pred             HhHHHHHHHHHHHHHHHHhhhc--cCCCCcEEEEecccccccCCCCCHHHHHHHHHHHHHHHHHHHHhh-hcCCEEEEEE
Confidence            9999999999999999875000  000168999999999999999999999999999999999999999 8899999999


Q ss_pred             cCcccCCCCCCCCChHHHHHH---------hhhhccCC-CCCCHHhHHHHHHHhccC
Q 025124          159 PGPIKDTAGVSKLAPEEIRSK---------ATDYMAAY-KFGEKWDIAMAALYLASD  205 (257)
Q Consensus       159 Pg~v~t~~~~~~~~~~~~~~~---------~~~~~~~~-~~~~~~dva~~~~~l~~~  205 (257)
                      ||++.|++.............         ........ ...+|+++|+.++.++..
T Consensus       195 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~vA~~~~~al~~  251 (319)
T 3ioy_A          195 PGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVIGARVIEAMKA  251 (319)
T ss_dssp             CCCBC-----------------------------CCGGGSSBCHHHHHHHHHHHHHT
T ss_pred             cCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCHHHHHHHHHHHHHc
Confidence            999999876533211111000         00001111 126899999999999965

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.97  E-value=3.9e-29  Score=203.58  Aligned_cols=195  Identities=24%  Similarity=0.309  Sum_probs=163.1

Q ss_pred             eEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCH----HHHHHHHHHHhHHHHHHHHHHHHHHHhc
Q 025124           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSP----NGFRTVIEIDSVGTFIMCHEALKYLKKG   97 (257)
Q Consensus        22 ~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~   97 (257)
                      +.++.+|++|+++++++++++ ++++++|++|||||.....++.+.+.    ++|+..+++|+.+++.+++++++.|.++
T Consensus        41 ~~~~~~D~~~~~~~~~~~~~~-~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  119 (242)
T 1uay_A           41 LIYVEGDVTREEDVRRAVARA-QEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMREN  119 (242)
T ss_dssp             SEEEECCTTCHHHHHHHHHHH-HHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTC
T ss_pred             eEEEeCCCCCHHHHHHHHHHH-HhhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence            356889999999999999999 88999999999999876666655544    4999999999999999999999999875


Q ss_pred             CCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHH
Q 025124           98 GRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR  177 (257)
Q Consensus        98 ~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~  177 (257)
                      ....  ....|+||++||..+..+.++...|+++|++++.|+++++.|+. ++||++++|+||++.|++....  .....
T Consensus       120 ~~~~--~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~-~~gi~v~~v~Pg~v~t~~~~~~--~~~~~  194 (242)
T 1uay_A          120 PPDA--EGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELA-GWGIRVVTVAPGLFDTPLLQGL--PEKAK  194 (242)
T ss_dssp             CCCT--TSCSEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSCSSHHHHTS--CHHHH
T ss_pred             CCCC--CCCCeEEEEeCChhhccCCCCCchhhHHHHHHHHHHHHHHHHHh-hcCcEEEEEEeccCcchhhhcc--chhHH
Confidence            3100  00035999999999998888999999999999999999999998 8899999999999999875432  23333


Q ss_pred             HHhhhhccC-CCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          178 SKATDYMAA-YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       178 ~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      .......+. +++.+|+|+|+.+++++++  .+++|+.+.+|||..+.
T Consensus       195 ~~~~~~~~~~~~~~~~~dva~~~~~l~~~--~~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          195 ASLAAQVPFPPRLGRPEEYAALVLHILEN--PMLNGEVVRLDGALRMA  240 (242)
T ss_dssp             HHHHTTCCSSCSCCCHHHHHHHHHHHHHC--TTCCSCEEEESTTCCCC
T ss_pred             HHHHhhCCCcccCCCHHHHHHHHHHHhcC--CCCCCcEEEEcCCeecC
Confidence            444455666 7889999999999999986  67899999999998764

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.97  E-value=2.3e-29  Score=205.73  Aligned_cols=196  Identities=16%  Similarity=0.132  Sum_probs=159.1

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC--CccEEEeCCCCCC-CCCCCCCCHHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG--KLDILVNAAAGNF-LVPAEDLSPNGFRTVIEI   78 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g--~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~   78 (257)
                      +|+.++++++.+.   .+.++.++.+|++|.++++++++++.++++  ++|+||||||... ..++.+.+.++|+..+++
T Consensus        36 ~r~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~  112 (250)
T 1yo6_A           36 ARDVEKATELKSI---KDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDV  112 (250)
T ss_dssp             ESSGGGCHHHHTC---CCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHH
T ss_pred             ecCHHHHHHHHhc---cCCceEEEEeecCCHHHHHHHHHHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHH
Confidence            5666666544321   256899999999999999999999999998  9999999999877 678888999999999999


Q ss_pred             HhHHHHHHHHHHHHHHHhc------CCCCCCCCCCceEEEEccccccccc-------ccchhhHHHHHHHHHHHHHHHHH
Q 025124           79 DSVGTFIMCHEALKYLKKG------GRGQASSSSGGIIINISATLHYTAT-------WYQIHVSAAKAAVDSITRSLALE  145 (257)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~------~~~~~~~~~~g~ii~iss~~~~~~~-------~~~~~Y~~sK~a~~~l~~~la~e  145 (257)
                      |+.+++.+++++++.|.++      +.   .....++||++||..+..+.       ++...|+++|+++++|+++++.|
T Consensus       113 N~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~iv~isS~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e  189 (250)
T 1yo6_A          113 NTTSVVLLTQKLLPLLKNAASKESGDQ---LSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVD  189 (250)
T ss_dssp             HTHHHHHHHHHTHHHHHHHHHSSCSSC---CCTTTCEEEEECCGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHhhcccccCCCc---ccCCCcEEEEeccCccccCCcccccccCCccHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999875      20   00114789999999888776       57789999999999999999999


Q ss_pred             hcCCCCeEEEEEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          146 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       146 ~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                      +. ++||++++|+||+++|++...                 ....+|+|+|+.+++++++...+++|+.+.+|||.
T Consensus       190 ~~-~~gi~v~~v~Pg~v~t~~~~~-----------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~  247 (250)
T 1yo6_A          190 LK-DDNVLVVNFCPGWVQTNLGGK-----------------NAALTVEQSTAELISSFNKLDNSHNGRFFMRNLKP  247 (250)
T ss_dssp             TG-GGTCEEEEEECCCC------------------------------HHHHHHHHHHHTTCCGGGTTCEEETTEEE
T ss_pred             hc-cCCeEEEEEcCCceecCCCCC-----------------CCCCCHHHHHHHHHHHHhcccccCCCeEEEECCcC
Confidence            98 889999999999999986421                 13578999999999999988888999999999874

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.97  E-value=2.3e-29  Score=206.56  Aligned_cols=194  Identities=20%  Similarity=0.174  Sum_probs=166.6

Q ss_pred             HHHHHHHHhcCCCeE------------EEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCC-CCCCCHHHHHHH
Q 025124            9 RSAVAALHSLGIPAI------------GLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP-AEDLSPNGFRTV   75 (257)
Q Consensus         9 ~~~~~~l~~~~~~~~------------~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~-~~~~~~~~~~~~   75 (257)
                      ..++..|.+.|.++.            .+.+|++|.++++++++++.++++++|+||||||+..... +.+.+.++|++.
T Consensus        36 ~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~  115 (251)
T 3orf_A           36 AEVVKFFKSKSWNTISIDFRENPNADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGM  115 (251)
T ss_dssp             HHHHHHHHHTTCEEEEEESSCCTTSSEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHH
T ss_pred             HHHHHHHHHCCCEEEEEeCCcccccccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHH
Confidence            455666666665443            4579999999999999999999999999999999776544 778889999999


Q ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhc-CCCCeEE
Q 025124           76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG-TDYAIRV  154 (257)
Q Consensus        76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~~gi~v  154 (257)
                      +++|+.+++.+++++++.|++          .|+||++||..+..+.++...|+++|+|+++|+++++.|++ .++||++
T Consensus       116 ~~~N~~g~~~l~~~~~~~~~~----------~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v  185 (251)
T 3orf_A          116 IDMNLYSAFASAHIGAKLLNQ----------GGLFVLTGASAALNRTSGMIAYGATKAATHHIIKDLASENGGLPAGSTS  185 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHEEE----------EEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEE
T ss_pred             HHHHhHHHHHHHHHHHHhhcc----------CCEEEEEechhhccCCCCCchhHHHHHHHHHHHHHHHHHhcccCCCcEE
Confidence            999999999999999999865          48899999999999999999999999999999999999963 2679999


Q ss_pred             EEEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccC-CCCcccCcEEEecCCcc
Q 025124          155 NGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD-AGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       155 ~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~-~~~~~~G~~~~~dgg~~  222 (257)
                      ++|+||+++|++.          .......+..++.+|+|+|+.+++|+++ .+.+++|+.+.+++|..
T Consensus       186 ~~v~PG~v~t~~~----------~~~~~~~~~~~~~~~~dva~~i~~l~~~~~~~~~tG~~i~v~~g~~  244 (251)
T 3orf_A          186 LGILPVTLDTPTN----------RKYMSDANFDDWTPLSEVAEKLFEWSTNSDSRPTNGSLVKFETKSK  244 (251)
T ss_dssp             EEEEESCBCCHHH----------HHHCTTSCGGGSBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEETT
T ss_pred             EEEecCcCcCcch----------hhhcccccccccCCHHHHHHHHHHHhcCccccCCcceEEEEecCCc
Confidence            9999999998743          2223334566788999999999999998 88899999999987754

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.96  E-value=1.7e-29  Score=206.02  Aligned_cols=179  Identities=16%  Similarity=0.040  Sum_probs=155.5

Q ss_pred             EEEEccCCCHHHHHHHHHHHHHHh--CCccEEEeCCCCCCCCCC-CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           23 IGLEGDVRKREDAVRVVESTINHF--GKLDILVNAAAGNFLVPA-EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        23 ~~~~~Dls~~~~~~~~~~~~~~~~--g~id~li~~ag~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.+|++|+++++++++++.+++  +++|+||||||+....++ .+.+.++|++.+++|+.+++.++++++|.|++   
T Consensus        49 ~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---  125 (241)
T 1dhr_A           49 VIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE---  125 (241)
T ss_dssp             EECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---
T ss_pred             EEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc---
Confidence            456899999999999999999999  799999999998777777 78899999999999999999999999999864   


Q ss_pred             CCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEecCcccCCCCCCCCChHHHHH
Q 025124          100 GQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS  178 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~  178 (257)
                             .|+||++||..+..+.++...|+++|+++++|+++++.|+. .++||++++|+||+++|++.....       
T Consensus       126 -------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~-------  191 (241)
T 1dhr_A          126 -------GGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSM-------  191 (241)
T ss_dssp             -------EEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHS-------
T ss_pred             -------CCEEEEECCHHHccCCCCchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccC-------
Confidence                   48899999999999999999999999999999999999985 146899999999999987532100       


Q ss_pred             HhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          179 KATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       179 ~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                         ......+...|+|+|+.+++++++...+++|+.+.+|||.
T Consensus       192 ---~~~~~~~~~~~~~vA~~v~~l~~~~~~~~~G~~~~v~g~~  231 (241)
T 1dhr_A          192 ---PEADFSSWTPLEFLVETFHDWITGNKRPNSGSLIQVVTTD  231 (241)
T ss_dssp             ---TTSCGGGSEEHHHHHHHHHHHHTTTTCCCTTCEEEEEEET
T ss_pred             ---cchhhccCCCHHHHHHHHHHHhcCCCcCccceEEEEeCCC
Confidence               0011234567999999999999999999999999999875

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.96  E-value=1.4e-29  Score=208.22  Aligned_cols=195  Identities=21%  Similarity=0.262  Sum_probs=147.9

Q ss_pred             HHHHHHHHhcCCCeEEE-----------EccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHH
Q 025124            9 RSAVAALHSLGIPAIGL-----------EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIE   77 (257)
Q Consensus         9 ~~~~~~l~~~~~~~~~~-----------~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~   77 (257)
                      ..++..|.+.|.++..+           .+|++|.++++++++++   ++++|+||||||+....       +.|+..++
T Consensus        15 ~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~Dl~~~~~v~~~~~~~---~~~id~lv~~Ag~~~~~-------~~~~~~~~   84 (257)
T 1fjh_A           15 AATRKVLEAAGHQIVGIDIRDAEVIADLSTAEGRKQAIADVLAKC---SKGMDGLVLCAGLGPQT-------KVLGNVVS   84 (257)
T ss_dssp             HHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHTTC---TTCCSEEEECCCCCTTC-------SSHHHHHH
T ss_pred             HHHHHHHHHCCCEEEEEeCCchhhccccccCCCCHHHHHHHHHHh---CCCCCEEEECCCCCCCc-------ccHHHHHH
Confidence            45667777777665543           47888888888777633   38999999999975411       23899999


Q ss_pred             HHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccc----------------------------cccccchhhH
Q 025124           78 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY----------------------------TATWYQIHVS  129 (257)
Q Consensus        78 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~----------------------------~~~~~~~~Y~  129 (257)
                      +|+.+++.++++++|.|.+++        .|+||++||..+.                            .+.++...|+
T Consensus        85 ~N~~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~  156 (257)
T 1fjh_A           85 VNYFGATELMDAFLPALKKGH--------QPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYA  156 (257)
T ss_dssp             HHTHHHHHHHHHHHHHHHTSS--------SCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHH
T ss_pred             HhhHHHHHHHHHHHHHHhhcC--------CcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccCCCCccHHH
Confidence            999999999999999998865        6899999999887                            4455778999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHHHHhhh--hccCCCCCCHHhHHHHHHHhccCCC
Q 025124          130 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD--YMAAYKFGEKWDIAMAALYLASDAG  207 (257)
Q Consensus       130 ~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~dva~~~~~l~~~~~  207 (257)
                      ++|++++.|+++++.|+. ++||++++|+||++.|++...... .........  ..+.+++.+|+|+|+.+++++++.+
T Consensus       157 ~sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~  234 (257)
T 1fjh_A          157 GSKNALTVAVRKRAAAWG-EAGVRLNTIAPGATETPLLQAGLQ-DPRYGESIAKFVPPMGRRAEPSEMASVIAFLMSPAA  234 (257)
T ss_dssp             HHHHHHHHHHHHTHHHHH-HTTCEEEEEEECC----------------------CCCSTTSCCCTHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHHHHHHHHh-hcCeEEEEEeeCCCCCccchhhcc-chhHHHHHHhcccccCCCCCHHHHHHHHHHHhCchh
Confidence            999999999999999998 889999999999999987543211 111111111  3466788999999999999999888


Q ss_pred             CcccCcEEEecCCccc
Q 025124          208 KYVNGNTLIVDGGNWL  223 (257)
Q Consensus       208 ~~~~G~~~~~dgg~~~  223 (257)
                      .+++|+.+.+|||..+
T Consensus       235 ~~~tG~~~~vdgG~~~  250 (257)
T 1fjh_A          235 SYVHGAQIVIDGGIDA  250 (257)
T ss_dssp             TTCCSCEEEESTTHHH
T ss_pred             cCCcCCEEEECCCccc
Confidence            8999999999999654

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.96  E-value=1.4e-29  Score=220.11  Aligned_cols=217  Identities=13%  Similarity=0.024  Sum_probs=172.4

Q ss_pred             HHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC-------------CCCCC-----------
Q 025124            9 RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN-------------FLVPA-----------   64 (257)
Q Consensus         9 ~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~-------------~~~~~-----------   64 (257)
                      +.+.+.+.+.+.++..+.||+++.++++++++++.+++|+||+||||||..             ...++           
T Consensus       112 ~~~~~~~~~~g~~~~~~~~Dvtd~~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~  191 (418)
T 4eue_A          112 IFFKEFAKKKGLVAKNFIEDAFSNETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDV  191 (418)
T ss_dssp             HHHHHHHHHTTCCEEEEESCTTCHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEET
T ss_pred             HHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccc
Confidence            455555666788899999999999999999999999999999999999974             22333           


Q ss_pred             ----------CCCCHHHHHHHHHHHhHHHH-HHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccc--hhhHHH
Q 025124           65 ----------EDLSPNGFRTVIEIDSVGTF-IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ--IHVSAA  131 (257)
Q Consensus        65 ----------~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~--~~Y~~s  131 (257)
                                .+.+.++|+..+++|..+.+ .+++++++.+...+        +|+||++||.++..+.+.+  +.|++|
T Consensus       192 ~~~~~~~~~~~~~t~e~~~~~~~vn~~~~~~~~~~~l~~~~~~~~--------gg~IV~iSSi~~~~~~p~~~~~aY~AS  263 (418)
T 4eue_A          192 ERDEITLKKVSSASIEEIEETRKVMGGEDWQEWCEELLYEDCFSD--------KATTIAYSYIGSPRTYKIYREGTIGIA  263 (418)
T ss_dssp             TTTEEEEEEECBCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEE--------EEEEEEEECCCCGGGTTTTTTSHHHHH
T ss_pred             cccccccccccCCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhhcC--------CcEEEEEeCchhcCCCCccccHHHHHH
Confidence                      45799999999999999888 77888776554433        6899999999999998888  999999


Q ss_pred             HHHHHHHHHHHHHHhcCC-CCeEEEEEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcc
Q 025124          132 KAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYV  210 (257)
Q Consensus       132 K~a~~~l~~~la~e~~~~-~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  210 (257)
                      |+|+.+|+++|+.|++ + +|||||+|+||++.|++................  ++.+.+++|++++.+.+|+++  ...
T Consensus       264 KaAL~~ltrsLA~ELa-~~~GIrVN~V~PG~v~T~~s~~ip~~p~y~~~~~~--~mk~~G~~E~v~e~~~~L~sd--~~~  338 (418)
T 4eue_A          264 KKDLEDKAKLINEKLN-RVIGGRAFVSVNKALVTKASAYIPTFPLYAAILYK--VMKEKNIHENCIMQIERMFSE--KIY  338 (418)
T ss_dssp             HHHHHHHHHHHHHHHH-HHHSCEEEEEECCCCCCHHHHTSTTHHHHHHHHHH--HHHHTTCCCCHHHHHHHHHHH--TTS
T ss_pred             HHHHHHHHHHHHHHhC-CccCeEEEEEECCcCcChhhhcCCCCcHHHHHHHH--HHhhcCChHHHHHHHHHHhhc--ccc
Confidence            9999999999999999 8 899999999999999875443322222121222  345678999999999999986  567


Q ss_pred             cCcEEEecCCcccCCCCC-CcHHHHHHHH
Q 025124          211 NGNTLIVDGGNWLSNPRD-LPKEAVNQLS  238 (257)
Q Consensus       211 ~G~~~~~dgg~~~~~~~~-~~~~~~~~~~  238 (257)
                      +|+.+.+|+|..+....| +-+...++..
T Consensus       339 ~g~~~~~D~~~~~r~d~~e~~~~~q~~~~  367 (418)
T 4eue_A          339 SNEKIQFDDKGRLRMDDLELRKDVQDEVD  367 (418)
T ss_dssp             SSSCCCCCTTSCEESCTTTTCHHHHHHHH
T ss_pred             CCCccccCCCceeeCChhhcCHHHHHHHH
Confidence            899999998766665444 4444444443

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.96  E-value=1.6e-28  Score=203.82  Aligned_cols=185  Identities=15%  Similarity=0.121  Sum_probs=164.0

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.+++.+.+.++.++.+|++|.++++++++++.++++++|+||||||.....++.+.+.++|+..+++|+.
T Consensus        62 ~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~  141 (272)
T 1yb1_A           62 DINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVL  141 (272)
T ss_dssp             ESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTH
T ss_pred             EcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhH
Confidence            68888999999999887888999999999999999999999999999999999999877778888899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhc--CCCCeEEEEEec
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG--TDYAIRVNGIAP  159 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~--~~~gi~v~~v~P  159 (257)
                      +++.+++.+++.|.+++        .++||++||..+..+.++...|+++|++++.|+++++.|+.  .+.||++++|+|
T Consensus       142 g~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~P  213 (272)
T 1yb1_A          142 AHFWTTKAFLPAMTKNN--------HGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCP  213 (272)
T ss_dssp             HHHHHHHHHHHHHHHTT--------CEEEEEECCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHhcC--------CCEEEEEechhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeC
Confidence            99999999999999876        68999999999998888899999999999999999999984  145899999999


Q ss_pred             CcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCC
Q 025124          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (257)
Q Consensus       160 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  206 (257)
                      |+++|++...            ...+..++.+|+|+|+.+++++...
T Consensus       214 g~v~t~~~~~------------~~~~~~~~~~~~dva~~i~~~~~~~  248 (272)
T 1yb1_A          214 NFVNTGFIKN------------PSTSLGPTLEPEEVVNRLMHGILTE  248 (272)
T ss_dssp             THHHHCSTTC------------THHHHCCCCCHHHHHHHHHHHHHTT
T ss_pred             CcccCCcccc------------ccccccCCCCHHHHHHHHHHHHHcC
Confidence            9999987431            0112356789999999999999754

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.96  E-value=1.5e-28  Score=203.15  Aligned_cols=201  Identities=19%  Similarity=0.155  Sum_probs=167.4

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC--CccEEEeCCCCCC-CCCCCCCCHHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG--KLDILVNAAAGNF-LVPAEDLSPNGFRTVIEI   78 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g--~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~   78 (257)
                      +|+.++++.+ +++.+.+.++.++.+|++|.++++.+++++.+.++  ++|+||||||+.. ..++.+.+.++|+..+++
T Consensus        55 ~r~~~~~~~~-~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~  133 (267)
T 1sny_A           55 CRNREQAKEL-EDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQT  133 (267)
T ss_dssp             ESCTTSCHHH-HHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred             ecChhhhHHH-HHhhccCCceEEEEecCCChHHHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhh
Confidence            4665555443 44444467899999999999999999999999999  8999999999876 677888899999999999


Q ss_pred             HhHHHHHHHHHHHHHHHhcCCC---CCCCCCCceEEEEcccccccccc---cchhhHHHHHHHHHHHHHHHHHhcCCCCe
Q 025124           79 DSVGTFIMCHEALKYLKKGGRG---QASSSSGGIIINISATLHYTATW---YQIHVSAAKAAVDSITRSLALEWGTDYAI  152 (257)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~---~~~~~~~g~ii~iss~~~~~~~~---~~~~Y~~sK~a~~~l~~~la~e~~~~~gi  152 (257)
                      |+.+++.+++++++.|.++...   .......++||++||..+..+.+   +...|+++|+++++|+++++.|+. ++||
T Consensus       134 N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi  212 (267)
T 1sny_A          134 NTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLY-PQRI  212 (267)
T ss_dssp             HTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHG-GGTC
T ss_pred             hchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhh-cCCc
Confidence            9999999999999999875100   00000037899999998877653   677899999999999999999998 8899


Q ss_pred             EEEEEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          153 RVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       153 ~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                      ++++|+||+++|++...                 ....+|+++++.+++++.......+|..+.+||+.
T Consensus       213 ~v~~v~Pg~v~t~~~~~-----------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~  264 (267)
T 1sny_A          213 MCVSLHPGWVKTDMGGS-----------------SAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGTP  264 (267)
T ss_dssp             EEEEECCCSBCSTTTCT-----------------TCSBCHHHHHHHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred             EEEEeCCcceecCCCCC-----------------CCCCCHHHHHHHHHHHHHhcCcCCCCcEEccCCcC
Confidence            99999999999986521                 13578999999999999988888999999999875

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.96  E-value=1.1e-29  Score=212.80  Aligned_cols=196  Identities=18%  Similarity=0.106  Sum_probs=153.2

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.+++   +.++.++.+|++|.++++++++++    +++|+||||||+...  ..+.+.++|+.++++|+.
T Consensus        47 ~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~v~~~~~~~----~~iD~lv~nAg~~~~--~~~~~~~~~~~~~~vN~~  117 (291)
T 3rd5_A           47 VRDTRKGEAAARTM---AGQVEVRELDLQDLSSVRRFADGV----SGADVLINNAGIMAV--PYALTVDGFESQIGTNHL  117 (291)
T ss_dssp             ESCHHHHHHHHTTS---SSEEEEEECCTTCHHHHHHHHHTC----CCEEEEEECCCCCSC--CCCBCTTSCBHHHHHHTH
T ss_pred             ECCHHHHHHHHHHh---cCCeeEEEcCCCCHHHHHHHHHhc----CCCCEEEECCcCCCC--cccCCHHHHHHHHHHHHH
Confidence            68888877766554   567999999999999999988876    799999999997643  356788999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccc-------------cccchhhHHHHHHHHHHHHHHHHHhcC
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-------------TWYQIHVSAAKAAVDSITRSLALEWGT  148 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~-------------~~~~~~Y~~sK~a~~~l~~~la~e~~~  148 (257)
                      |+++++++++|.|.+            +||++||..+..+             .++...|++||+|+++|+++++.|+. 
T Consensus       118 g~~~l~~~~~~~~~~------------riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-  184 (291)
T 3rd5_A          118 GHFALTNLLLPRLTD------------RVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLANLLFTSELQRRLT-  184 (291)
T ss_dssp             HHHHHHHHHGGGEEE------------EEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHHh------------heeEeechhhccCCCCcccccccccCCCCcchHHHHHHHHHHHHHHHHHHHh-
Confidence            999999999998754            5999999988755             34567899999999999999999998 


Q ss_pred             CCC--eEEEEEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCC-HHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          149 DYA--IRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE-KWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       149 ~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      ++|  |++++|+||++.|++.....  ..... .....+..++.. |+|+|+.+++++++  .+++|+.+.+|||+.-.
T Consensus       185 ~~g~~i~v~~v~PG~v~T~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~A~~~~~l~~~--~~~~G~~~~vdgG~~~~  258 (291)
T 3rd5_A          185 AAGSPLRALAAHPGYSHTNLQGASG--RKLGD-ALMSAATRVVATDADFGARQTLYAASQ--DLPGDSFVGPRFGYLGR  258 (291)
T ss_dssp             HTTCCCEEEEECCSGGGSCC-----------------------CHHHHHHHHHHHHHHHS--CCCTTCEEEETTSSSSC
T ss_pred             hCCCCEEEEEeeCCCCccccccccc--hHHHH-HHHHHHHHHHhCCHHHHHHHHHHHHcC--CCCCCceeCCcccccCc
Confidence            777  99999999999998764421  11111 112234445555 99999999999987  48999999999997643

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.96  E-value=3.1e-29  Score=206.00  Aligned_cols=183  Identities=21%  Similarity=0.153  Sum_probs=151.2

Q ss_pred             CCCeEEEEccCCCH-HHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Q 025124           19 GIPAIGLEGDVRKR-EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG   97 (257)
Q Consensus        19 ~~~~~~~~~Dls~~-~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~   97 (257)
                      +.++.++.+|++|+ ++++++++++.++++++|+||||||+.        +.++|+..+++|+.+++.++++++|.|.++
T Consensus        54 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~  125 (254)
T 1sby_A           54 KVNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKR  125 (254)
T ss_dssp             TSEEEEEECCTTSCHHHHHHHHHHHHHHHSCCCEEEECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGG
T ss_pred             CceEEEEEEecCCChHHHHHHHHHHHHhcCCCCEEEECCccC--------CHHHHhhhheeeehhHHHHHHHHHHHHHHh
Confidence            45788999999998 999999999999999999999999963        456789999999999999999999999765


Q ss_pred             CCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCCh---H
Q 025124           98 GRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP---E  174 (257)
Q Consensus        98 ~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~---~  174 (257)
                      ..+.     .|+||++||..+..+.++...|+++|+++++|+++++.++. ++||++++|+||+++|++.......   .
T Consensus       126 ~~~~-----~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~  199 (254)
T 1sby_A          126 KGGP-----GGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAP-ITGVTAYSINPGITRTPLVHTFNSWLDVE  199 (254)
T ss_dssp             GTCC-----CEEEEEECCGGGTSCCTTSHHHHHHHHHHHHHHHHHHHHHH-HHSEEEEEEEECSEESHHHHSCCCGGGSC
T ss_pred             cCCC-----CCEEEEECchhhccCCCCchHHHHHHHHHHHHHHHHHHHhc-cCCeEEEEEecCCccCccccccchhhhhh
Confidence            3111     48999999999999999999999999999999999999987 7899999999999999875321110   0


Q ss_pred             HHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          175 EIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                      ..........   .+.+|+|+|+.++++++   .+.+|+.+.+|||.
T Consensus       200 ~~~~~~~~~~---~~~~~~dvA~~i~~~~~---~~~~G~~~~v~gG~  240 (254)
T 1sby_A          200 PRVAELLLSH---PTQTSEQCGQNFVKAIE---ANKNGAIWKLDLGT  240 (254)
T ss_dssp             TTHHHHHTTS---CCEEHHHHHHHHHHHHH---HCCTTCEEEEETTE
T ss_pred             HHHHHHHhcC---CCCCHHHHHHHHHHHHH---cCCCCCEEEEeCCc
Confidence            1111111222   23589999999999996   46899999999995

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.96  E-value=8.4e-29  Score=201.28  Aligned_cols=181  Identities=20%  Similarity=0.097  Sum_probs=154.6

Q ss_pred             eEEEEccCCCHHHHHHHHHHHHHHh--CCccEEEeCCCCCCCCCC-CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Q 025124           22 AIGLEGDVRKREDAVRVVESTINHF--GKLDILVNAAAGNFLVPA-EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (257)
Q Consensus        22 ~~~~~~Dls~~~~~~~~~~~~~~~~--g~id~li~~ag~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (257)
                      ..++.+|++|+++++++++++.+.+  +++|+||||||+....++ .+.+.++|+..+++|+.+++.++++++|.|++  
T Consensus        44 ~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--  121 (236)
T 1ooe_A           44 NILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--  121 (236)
T ss_dssp             EEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--
T ss_pred             cEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--
Confidence            3456899999999999999999999  799999999998776777 78889999999999999999999999999864  


Q ss_pred             CCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEecCcccCCCCCCCCChHHHH
Q 025124           99 RGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKLAPEEIR  177 (257)
Q Consensus        99 ~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~  177 (257)
                              .|+||++||..+..+.++...|+++|+++++|+++++.|+. .++||++++|+||+++|++....       
T Consensus       122 --------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~-------  186 (236)
T 1ooe_A          122 --------GGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKW-------  186 (236)
T ss_dssp             --------EEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHH-------
T ss_pred             --------CCEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhc-------
Confidence                    47899999999999999999999999999999999999974 25689999999999998753110       


Q ss_pred             HHhhhhccCCCCCCHHhHHHHHHHhc-cCCCCcccCcEEEecCCcc
Q 025124          178 SKATDYMAAYKFGEKWDIAMAALYLA-SDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       178 ~~~~~~~~~~~~~~~~dva~~~~~l~-~~~~~~~~G~~~~~dgg~~  222 (257)
                         .......+..+|+|+|+.+++++ ++.+.+++|+.+.++||..
T Consensus       187 ---~~~~~~~~~~~~~dvA~~i~~~l~s~~~~~~~G~~~~v~gg~~  229 (236)
T 1ooe_A          187 ---MPNADHSSWTPLSFISEHLLKWTTETSSRPSSGALLKITTENG  229 (236)
T ss_dssp             ---STTCCGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEETT
T ss_pred             ---CCCccccccCCHHHHHHHHHHHHcCCCcccccccEEEEecCCC
Confidence               01112234578999999998554 8888899999999999854

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.96  E-value=3.2e-29  Score=213.23  Aligned_cols=185  Identities=19%  Similarity=0.203  Sum_probs=148.6

Q ss_pred             CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Q 025124           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (257)
Q Consensus        19 ~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (257)
                      +.++.++.+|++|.++++++++++.  ++++|+||||||+....++.+.+.++|++++++|+.+++.++++++|+|++++
T Consensus        56 ~~~~~~~~~Dv~d~~~v~~~~~~~~--~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~  133 (327)
T 1jtv_A           56 PGSLETLQLDVRDSKSVAAARERVT--EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG  133 (327)
T ss_dssp             TTSEEEEECCTTCHHHHHHHHHTCT--TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CCceEEEEecCCCHHHHHHHHHHHh--cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence            4679999999999999999999883  58999999999987777888899999999999999999999999999998776


Q ss_pred             CCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChH----
Q 025124           99 RGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE----  174 (257)
Q Consensus        99 ~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~----  174 (257)
                              .|+||++||..+..+.++...|++||+++++|+++++.|+. ++||+|++|+||+++|++........    
T Consensus       134 --------~g~IV~isS~~~~~~~~~~~~Y~aSK~a~~~~~~~la~el~-~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~  204 (327)
T 1jtv_A          134 --------SGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLL-PFGVHLSLIECGPVHTAFMEKVLGSPEEVL  204 (327)
T ss_dssp             --------CEEEEEEEEGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCC-------CCHHHHH
T ss_pred             --------CCEEEEECCcccccCCCCChHHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEEeCcccChHHhhhhhcchhhh
Confidence                    79999999999999989999999999999999999999999 89999999999999999864322111    


Q ss_pred             -----HHHHH---hhh--hccCCCC-CCHHhHHHHHHHhccC---CCCcccCcE
Q 025124          175 -----EIRSK---ATD--YMAAYKF-GEKWDIAMAALYLASD---AGKYVNGNT  214 (257)
Q Consensus       175 -----~~~~~---~~~--~~~~~~~-~~~~dva~~~~~l~~~---~~~~~~G~~  214 (257)
                           .....   +..  ..+.+++ .+|+|+|+.++++++.   ..++++|+.
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~l~~~~~~~~~~~tg~~  258 (327)
T 1jtv_A          205 DRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRAPKPTLRYFTTER  258 (327)
T ss_dssp             HTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHHHHHHHHHCSSCCSEEESCST
T ss_pred             ccCCHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHcCCCCCeEEEeCch
Confidence                 11110   110  0122233 5899999999999974   345566644

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.96  E-value=5.9e-29  Score=203.30  Aligned_cols=185  Identities=18%  Similarity=0.163  Sum_probs=130.5

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.+     ..++.++.+|+++..+ ...+.+..++++++|++|||||+....++.+.+.++|++.+++|+.
T Consensus        35 ~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~  108 (245)
T 3e9n_A           35 GRNPEHLAALAE-----IEGVEPIESDIVKEVL-EEGGVDKLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVI  108 (245)
T ss_dssp             ESCHHHHHHHHT-----STTEEEEECCHHHHHH-TSSSCGGGTTCSCCSEEEECC----------CHHHHHHHHHHHHTH
T ss_pred             eCCHHHHHHHHh-----hcCCcceecccchHHH-HHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhH
Confidence            577777766543     2468899999998877 5555556677899999999999888888889999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.++++++|.|+++         +|+||++||..+..+.++...|+++|+|+++|+++++.|+. ++||++++|+||+
T Consensus       109 ~~~~l~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~  178 (245)
T 3e9n_A          109 VPAELSRQLLPALRAA---------SGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEA-NNGIRVSTVSPGP  178 (245)
T ss_dssp             HHHHHHHHHHHHHHHH---------TCEEEEEC----------CHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECC
T ss_pred             HHHHHHHHHHHHHhhc---------CCeEEEEcCcccccCCCCchHHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecCC
Confidence            9999999999999875         58999999999999999999999999999999999999999 8999999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCC
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK  208 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  208 (257)
                      +.|++......      ......+..++.+|+|+|+.++++++....
T Consensus       179 v~t~~~~~~~~------~~~~~~~~~~~~~p~dvA~~i~~l~~~~~~  219 (245)
T 3e9n_A          179 TNTPMLQGLMD------SQGTNFRPEIYIEPKEIANAIRFVIDAGET  219 (245)
T ss_dssp             C----------------------CCGGGSCHHHHHHHHHHHHTSCTT
T ss_pred             ccCchhhhhhh------hhhcccccccCCCHHHHHHHHHHHHcCCCc
Confidence            99987543221      112223455678999999999999986543

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.96  E-value=7.2e-28  Score=199.48  Aligned_cols=186  Identities=22%  Similarity=0.239  Sum_probs=159.1

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCC-HHHHHHHHHHHh
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS-PNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~-~~~~~~~~~~n~   80 (257)
                      +|+.++++++.+++...+.++.++.+|++|.++++.+++++.++++++|+||||||....... +.+ .++++..+++|+
T Consensus        36 ~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~-~~~~~~~~~~~~~~N~  114 (276)
T 1wma_A           36 ARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVAD-PTPFHIQAEVTMKTNF  114 (276)
T ss_dssp             ESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCCTTC-CSCHHHHHHHHHHHHT
T ss_pred             eCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCcccccCCC-ccccHHHHHhhhheee
Confidence            688888999999998877889999999999999999999999999999999999997654433 334 589999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccccc--------------------------------------
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--------------------------------------  122 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~--------------------------------------  122 (257)
                      .+++++++++++.|.+          .|+||++||..+..+.                                      
T Consensus       115 ~g~~~l~~~~~~~~~~----------~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~  184 (276)
T 1wma_A          115 FGTRDVCTELLPLIKP----------QGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQ  184 (276)
T ss_dssp             HHHHHHHHHHGGGEEE----------EEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTT
T ss_pred             eeHHHHHHHHHHhhCC----------CCEEEEECChhhhcccccCChhHHhhccccccchhhhhhhhhhhhhhhcccccc
Confidence            9999999999998864          4789999998776431                                      


Q ss_pred             ---ccchhhHHHHHHHHHHHHHHHHHhcCC----CCeEEEEEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhH
Q 025124          123 ---WYQIHVSAAKAAVDSITRSLALEWGTD----YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI  195 (257)
Q Consensus       123 ---~~~~~Y~~sK~a~~~l~~~la~e~~~~----~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  195 (257)
                         .+...|+++|++++.|++.++.++. +    .||++++|+||++.|++...                 ..+.+|+|+
T Consensus       185 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~-~~~~~~~i~v~~v~PG~v~t~~~~~-----------------~~~~~~~~~  246 (276)
T 1wma_A          185 KEGWPSSAYGVTKIGVTVLSRIHARKLS-EQRKGDKILLNACCPGWVRTDMAGP-----------------KATKSPEEG  246 (276)
T ss_dssp             TTTCCSCHHHHHHHHHHHHHHHHHHHHH-HHCTTSCCEEEEEECCSBCSTTTCT-----------------TCSBCHHHH
T ss_pred             cCCCccchhHHHHHHHHHHHHHHHHHhh-cccCCCceEEEEecCCccccCcCCc-----------------cccCChhHh
Confidence               1237899999999999999999997 6    79999999999999986532                 246799999


Q ss_pred             HHHHHHhccCC--CCcccCcEEE
Q 025124          196 AMAALYLASDA--GKYVNGNTLI  216 (257)
Q Consensus       196 a~~~~~l~~~~--~~~~~G~~~~  216 (257)
                      |+.++++++.+  ..+++|+.+.
T Consensus       247 a~~~~~l~~~~~~~~~~~G~~~~  269 (276)
T 1wma_A          247 AETPVYLALLPPDAEGPHGQFVS  269 (276)
T ss_dssp             THHHHHHHSCCTTCCCCCSCEEE
T ss_pred             hhhHhhhhcCcccccccCceEec
Confidence            99999999854  3689999887

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.96  E-value=1.6e-27  Score=200.91  Aligned_cols=187  Identities=20%  Similarity=0.135  Sum_probs=158.7

Q ss_pred             CCCcHHHHHHHHHHHHhcC-CCeEEEEccCCCH-HHHHHHHHHHHHHhCCccEEEeCCCCCCC-----------------
Q 025124            1 MGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKR-EDAVRVVESTINHFGKLDILVNAAAGNFL-----------------   61 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~-~~~~~~~~Dls~~-~~~~~~~~~~~~~~g~id~li~~ag~~~~-----------------   61 (257)
                      ++|+.++++++.+++.+.+ .++.++.+|++|. ++++.+++.+.+++++||+||||||+...                 
T Consensus        42 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~  121 (311)
T 3o26_A           42 TCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGED  121 (311)
T ss_dssp             EESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSS
T ss_pred             EeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCCCCCEEEECCcccccccccchhhhcccccccc
Confidence            3689999999999998774 5799999999998 99999999999999999999999997632                 


Q ss_pred             -------------CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccccc------
Q 025124           62 -------------VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT------  122 (257)
Q Consensus        62 -------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~------  122 (257)
                                   .++.+.+.++|+..+++|+.|++.++++++|.|++++        .|+||++||..+..+.      
T Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~--------~~~IV~isS~~~~~~~~~~~~~  193 (311)
T 3o26_A          122 SEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSD--------SPRIVNVSSSTGSLKYVSNETA  193 (311)
T ss_dssp             TTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS--------SCEEEEECCGGGSGGGCCCHHH
T ss_pred             hhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhccCC--------CCeEEEEecCCcccccccchhh
Confidence                         2456778999999999999999999999999998876        6899999999887653      


Q ss_pred             -------------------------------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCC
Q 025124          123 -------------------------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT  165 (257)
Q Consensus       123 -------------------------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~  165 (257)
                                                           ++...|++||+|+++|+++++.|+.   +|+|++|+||++.|+
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~e~~---~i~v~~v~PG~v~T~  270 (311)
T 3o26_A          194 LEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRVLANKIP---KFQVNCVCPGLVKTE  270 (311)
T ss_dssp             HHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHHHHHHHCT---TSEEEEECCCSBCSG
T ss_pred             hhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHHHHHhhcC---CceEEEecCCceecC
Confidence                                                 3557899999999999999999986   399999999999998


Q ss_pred             CCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEE
Q 025124          166 AGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTL  215 (257)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~  215 (257)
                      +....                 ...++++.++.+++++.......+|..+
T Consensus       271 ~~~~~-----------------~~~~~~~~a~~~~~~~~~~~~~~~g~~~  303 (311)
T 3o26_A          271 MNYGI-----------------GNYTAEEGAEHVVRIALFPDDGPSGFFY  303 (311)
T ss_dssp             GGTTC-----------------CSBCHHHHHHHHHHHHTCCSSCCCSCEE
T ss_pred             CcCCC-----------------CCCCHHHHHHHHHHHHhCCCCCCCceEe
Confidence            65321                 1258999999999998755544455443

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.95  E-value=2.5e-26  Score=191.86  Aligned_cols=185  Identities=19%  Similarity=0.190  Sum_probs=157.0

Q ss_pred             CCCcHHHHHHHHHHHHhcCC-CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeC-CCCCCCCCCCCCCHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNA-AAGNFLVPAEDLSPNGFRTVIEI   78 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~-~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~-ag~~~~~~~~~~~~~~~~~~~~~   78 (257)
                      ++|++++++++.+++.+.+. ++.++.+|++|.++++.+++++.+++|++|++||| +|... ..+.+.+.++|+..+++
T Consensus        58 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~li~naag~~~-~~~~~~~~~~~~~~~~v  136 (286)
T 1xu9_A           58 TARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTS-LNLFHDDIHHVRKSMEV  136 (286)
T ss_dssp             EESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCSEEEECCCCCCC-CCCCCSCHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCCC-CccccCCHHHHHHHHHH
Confidence            36889999999888877654 68999999999999999999999999999999999 56543 45566789999999999


Q ss_pred             HhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHh--cCCCCeEEEE
Q 025124           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW--GTDYAIRVNG  156 (257)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~--~~~~gi~v~~  156 (257)
                      |+.|++.++++++|.|.++         .|+||++||..+..+.++...|+++|+++++|+++++.|+  . ..||++++
T Consensus       137 N~~g~~~l~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~~~-~~~i~v~~  206 (286)
T 1xu9_A          137 NFLSYVVLTVAALPMLKQS---------NGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVS-RVNVSITL  206 (286)
T ss_dssp             HTHHHHHHHHHHHHHHHHH---------TCEEEEEEEGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHH-TCCCEEEE
T ss_pred             HhhHHHHHHHHHHHHHHHC---------CCEEEEECCcccccCCCCccHHHHHHHHHHHHHHHHHHHHhhc-CCCeEEEE
Confidence            9999999999999998764         5899999999999999999999999999999999999999  5 78999999


Q ss_pred             EecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCC
Q 025124          157 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (257)
Q Consensus       157 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  206 (257)
                      |+||+++|++.....         .. .......+|+++|+.++..+...
T Consensus       207 v~Pg~v~t~~~~~~~---------~~-~~~~~~~~~~~vA~~i~~~~~~~  246 (286)
T 1xu9_A          207 CVLGLIDTETAMKAV---------SG-IVHMQAAPKEECALEIIKGGALR  246 (286)
T ss_dssp             EEECCBCCHHHHHHS---------CG-GGGGGCBCHHHHHHHHHHHHHTT
T ss_pred             eecCccCChhHHHhc---------cc-cccCCCCCHHHHHHHHHHHHhcC
Confidence            999999987532110         00 11123578999999999988643

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.94  E-value=6.6e-27  Score=229.81  Aligned_cols=206  Identities=13%  Similarity=0.124  Sum_probs=167.2

Q ss_pred             CCcHHHHHHHHHHHHhc----CCCeEEEEccCCCHHHHHHHHHHHHHH-----hC-CccEEEeCCCCCCCC-CCCCCC--
Q 025124            2 GRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTINH-----FG-KLDILVNAAAGNFLV-PAEDLS--   68 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~-----~g-~id~li~~ag~~~~~-~~~~~~--   68 (257)
                      +|+.++++++.+++.+.    +.++.++.||++|.++++.+++++.++     +| +||+||||||+.... ++.+.+  
T Consensus       708 ~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~  787 (1887)
T 2uv8_A          708 SRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSK  787 (1887)
T ss_dssp             SSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHH
T ss_pred             cCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcc
Confidence            57777887777776432    567899999999999999999999998     66 999999999987776 888888  


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHH--HHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHH-HHHHHHH
Q 025124           69 PNGFRTVIEIDSVGTFIMCHEA--LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSI-TRSLALE  145 (257)
Q Consensus        69 ~~~~~~~~~~n~~~~~~l~~~~--~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l-~~~la~e  145 (257)
                      .++|+.++++|+.+++.+++.+  ++.|.+++        .|+||++||..+..+  +.+.|+++|+|+++| ++.++.+
T Consensus       788 ~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~--------~G~IVnISS~ag~~g--g~~aYaASKAAL~~Lttr~lA~e  857 (1887)
T 2uv8_A          788 SEFAHRIMLTNILRMMGCVKKQKSARGIETRP--------AQVILPMSPNHGTFG--GDGMYSESKLSLETLFNRWHSES  857 (1887)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCC--------EEEEEEECSCTTCSS--CBTTHHHHHHHGGGHHHHHHHSS
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCC--------CCEEEEEcChHhccC--CCchHHHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999988  67776654        589999999988877  678999999999999 8999999


Q ss_pred             hcCCCCeEEEEEecCccc-CCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCC-CCcccCcEEEec--CCc
Q 025124          146 WGTDYAIRVNGIAPGPIK-DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA-GKYVNGNTLIVD--GGN  221 (257)
Q Consensus       146 ~~~~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~-~~~~~G~~~~~d--gg~  221 (257)
                      +. ++ |+||+|+||+++ |+|........    ......+. +..+|+|+|..++||+++. +.+++|+.+.+|  ||+
T Consensus       858 la-~~-IrVNaV~PG~V~tT~m~~~~~~~~----~~~~~~pl-r~~sPEEVA~avlfLaSd~~as~iTGq~I~VDVDGG~  930 (1887)
T 2uv8_A          858 WA-NQ-LTVCGAIIGWTRGTGLMSANNIIA----EGIEKMGV-RTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGL  930 (1887)
T ss_dssp             CT-TT-EEEEEEEECCEECC-----CCTTH----HHHHTTSC-CCEEHHHHHHHHHGGGSHHHHHHHHHSCEEEEESCST
T ss_pred             hC-CC-eEEEEEEecccccccccccchhHH----HHHHhcCC-CCCCHHHHHHHHHHHhCCCccccccCcEEEEECCCCe
Confidence            87 66 999999999999 66643211111    11222333 5679999999999999987 678999999875  997


Q ss_pred             ccC
Q 025124          222 WLS  224 (257)
Q Consensus       222 ~~~  224 (257)
                      ...
T Consensus       931 ~~~  933 (1887)
T 2uv8_A          931 QFV  933 (1887)
T ss_dssp             TTS
T ss_pred             ecc
Confidence            654

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.94  E-value=7.5e-26  Score=222.02  Aligned_cols=206  Identities=13%  Similarity=0.145  Sum_probs=166.9

Q ss_pred             CCcHHHHHHHHHHHHh----cCCCeEEEEccCCCHHHHHHHHHHHHHH---hC-CccEEEeCCCCCCCC-CCCCCC--HH
Q 025124            2 GRRKTVLRSAVAALHS----LGIPAIGLEGDVRKREDAVRVVESTINH---FG-KLDILVNAAAGNFLV-PAEDLS--PN   70 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~----~~~~~~~~~~Dls~~~~~~~~~~~~~~~---~g-~id~li~~ag~~~~~-~~~~~~--~~   70 (257)
                      .|+.++++++.+++.+    .|.++.++.||++|.++++.+++++.++   +| +||+||||||+.... ++.+.+  .+
T Consensus       685 ~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e  764 (1878)
T 2uv9_A          685 SRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSE  764 (1878)
T ss_dssp             SSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHH
T ss_pred             cCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHH
Confidence            3666777666665532    2667999999999999999999999998   89 999999999987776 888998  89


Q ss_pred             HHHHHHHHHhHHHHHHHHH--HHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHH-hc
Q 025124           71 GFRTVIEIDSVGTFIMCHE--ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE-WG  147 (257)
Q Consensus        71 ~~~~~~~~n~~~~~~l~~~--~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e-~~  147 (257)
                      +|+.++++|+.+++.+++.  +++.|.+++        .|+||++||..+..+  +.+.|+++|+|+++|++.++.+ +.
T Consensus       765 ~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~--------~G~IVnISS~ag~~g--g~~aYaASKAAL~aLt~~laAeEla  834 (1878)
T 2uv9_A          765 LAHRIMLTNLLRLLGAIKTQKKERGYETRP--------AQVILPLSPNHGTFG--NDGLYSESKLALETLFNRWYSESWG  834 (1878)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHHHHTCCSCC--------EEECCEECSCSSSSS--CCSSHHHHHHHHTTHHHHHHHSTTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhHHHHhCC--------CCEEEEEcchhhccC--CchHHHHHHHHHHHHHHHHHHHHcC
Confidence            9999999999999999987  677776654        589999999988877  4678999999999999877665 66


Q ss_pred             CCCCeEEEEEecCccc-CCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCC-CcccCcEEEe--cCCccc
Q 025124          148 TDYAIRVNGIAPGPIK-DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG-KYVNGNTLIV--DGGNWL  223 (257)
Q Consensus       148 ~~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~-~~~~G~~~~~--dgg~~~  223 (257)
                       ++ |+||+|+||++. |+|...    .+.........+. +..+|+|+|..+++|+++.+ .+++|+.+.+  |||...
T Consensus       835 -~~-IrVNaVaPG~V~gT~m~~~----~~~~~~~~~~~pl-r~~sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~  907 (1878)
T 2uv9_A          835 -NY-LTICGAVIGWTRGTGLMSA----NNLVAEGVEKLGV-RTFSQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQF  907 (1878)
T ss_dssp             -TT-EEEEEEEECCBCCTTSCSH----HHHTHHHHHTTTC-CCBCHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGG
T ss_pred             -CC-eEEEEEEecceecCccccc----chhhHHHHHhcCC-CCCCHHHHHHHHHHHhCCcccccccCcEEEEEcCCCccc
Confidence             55 999999999999 887532    1111222223333 56699999999999999876 7899999887  599765


Q ss_pred             C
Q 025124          224 S  224 (257)
Q Consensus       224 ~  224 (257)
                      .
T Consensus       908 ~  908 (1878)
T 2uv9_A          908 I  908 (1878)
T ss_dssp             C
T ss_pred             c
Confidence            4

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.93  E-value=1.9e-25  Score=177.56  Aligned_cols=173  Identities=14%  Similarity=0.043  Sum_probs=144.9

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|++++++++.+++.   .  .++.+|++|+++++.++++    ++++|++|||||.....++.+.+.++|+..+++|+
T Consensus        28 ~~r~~~~~~~~~~~~~---~--~~~~~D~~~~~~~~~~~~~----~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~   98 (207)
T 2yut_A           28 SGRRAGALAELAREVG---A--RALPADLADELEAKALLEE----AGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHL   98 (207)
T ss_dssp             ECSCHHHHHHHHHHHT---C--EECCCCTTSHHHHHHHHHH----HCSEEEEEECCCCCCCBCSCC---CHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHhcc---C--cEEEeeCCCHHHHHHHHHh----cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHh
Confidence            3688888887776653   1  8899999999999999887    78999999999987777888889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .+++.+++++    .+++        .++||++||..+..+.++...|+++|++++.|+++++.|+. ++||++++|+||
T Consensus        99 ~~~~~l~~~~----~~~~--------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~-~~gi~v~~v~pg  165 (207)
T 2yut_A           99 LTAAFVLKHA----RFQK--------GARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELL-REGVHLVLVRLP  165 (207)
T ss_dssp             HHHHHHHHHC----CEEE--------EEEEEEECCCHHHHSSTTBHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEECCC
T ss_pred             HHHHHHHHHH----HhcC--------CcEEEEEcChhhccCCCCcchHHHHHHHHHHHHHHHHHHHh-hhCCEEEEEecC
Confidence            9999999998    2332        58999999999998888999999999999999999999998 889999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCC
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG  207 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  207 (257)
                      ++.|++...            ...+..++.+|+|+|+.++++++.+.
T Consensus       166 ~v~t~~~~~------------~~~~~~~~~~~~dva~~~~~~~~~~~  200 (207)
T 2yut_A          166 AVATGLWAP------------LGGPPKGALSPEEAARKVLEGLFREP  200 (207)
T ss_dssp             CBCSGGGGG------------GTSCCTTCBCHHHHHHHHHHHHC--C
T ss_pred             cccCCCccc------------cCCCCCCCCCHHHHHHHHHHHHhCCC
Confidence            999886211            12345678999999999999997643

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.93  E-value=3e-27  Score=225.93  Aligned_cols=207  Identities=14%  Similarity=0.138  Sum_probs=167.7

Q ss_pred             CCcHHHHHHHHHHHHhc----CCCeEEEEccCCCHHHHHHHHHHHHHH-----hC-CccEEEeCCCCCCCC-CCCCCC--
Q 025124            2 GRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTINH-----FG-KLDILVNAAAGNFLV-PAEDLS--   68 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~-----~g-~id~li~~ag~~~~~-~~~~~~--   68 (257)
                      +|+.++++++.+++.+.    +.++.++.||++|.++++++++++.++     +| +||+||||||+.... ++.+.+  
T Consensus       509 ~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s  588 (1688)
T 2pff_A          509 SRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSK  588 (1688)
T ss_dssp             SSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTH
T ss_pred             CCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCC
Confidence            46666666666666332    567899999999999999999999998     77 999999999987776 888888  


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHH--HHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHH-HHHHHHH
Q 025124           69 PNGFRTVIEIDSVGTFIMCHEA--LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSI-TRSLALE  145 (257)
Q Consensus        69 ~~~~~~~~~~n~~~~~~l~~~~--~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l-~~~la~e  145 (257)
                      .++|++++++|+.+++.+++.+  ++.|.+++        .|+||++||..+..+  +.+.|++||+|+++| ++.++.+
T Consensus       589 ~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krg--------gGrIVnISSiAG~~G--g~saYaASKAAL~aLttrsLAeE  658 (1688)
T 2pff_A          589 SEFAHRIMLTNILRMMGCVKKQKSARGIETRP--------AQVILPMSPNHGTFG--GDGMYSESKLSLETLFNRWHSES  658 (1688)
T ss_dssp             HHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSC--------EEECCCCCSCTTTSS--CBTTHHHHHHHHTHHHHHTTTSS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhChHHHhCC--------CCEEEEEEChHhccC--CchHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999998  77887654        589999999988876  678999999999999 7888888


Q ss_pred             hcCCCCeEEEEEecCccc-CCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCC-CCcccCcEEEec--CCc
Q 025124          146 WGTDYAIRVNGIAPGPIK-DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA-GKYVNGNTLIVD--GGN  221 (257)
Q Consensus       146 ~~~~~gi~v~~v~Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~-~~~~~G~~~~~d--gg~  221 (257)
                      +. +. |+||+|+||+++ |++....    ..........+. +..+|+|+|+.+++|+++. +.+++|+.+.+|  ||+
T Consensus       659 la-~~-IRVNaVaPG~V~TT~M~~~~----e~~~~~l~~ipl-R~~sPEEVA~aIlFLaSd~sAs~ITGq~I~VDVDGG~  731 (1688)
T 2pff_A          659 WA-NQ-LTVCGAIIGWTRGTGLMSAN----NIIAEGIEKMGV-RTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGL  731 (1688)
T ss_dssp             CT-TT-EECCCCCCCCCCCCSSSCTT----TTCSTTTSSSSC-CCCCCCTTHHHHHHHTSTTHHHHHTTSCCCCCCSCSG
T ss_pred             cC-CC-eEEEEEEECcCcCCcccCCc----hHHHHHHHhCCC-CCCCHHHHHHHHHHHhCCCccccccCcEEEEEcCCCe
Confidence            87 66 999999999999 5654321    000111122232 5669999999999999987 678999999876  997


Q ss_pred             ccCC
Q 025124          222 WLSN  225 (257)
Q Consensus       222 ~~~~  225 (257)
                      ....
T Consensus       732 ~~~~  735 (1688)
T 2pff_A          732 QFVP  735 (1688)
T ss_dssp             GGSS
T ss_pred             eecC
Confidence            6543

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.92  E-value=3.7e-24  Score=169.61  Aligned_cols=179  Identities=17%  Similarity=0.204  Sum_probs=150.4

Q ss_pred             HHHHHHHHhcCCCeEE-------EEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            9 RSAVAALHSLGIPAIG-------LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         9 ~~~~~~l~~~~~~~~~-------~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      ..+++.|. .|.++..       +.+|++|+++++++++++    +++|++|||||.....++.+.+.++|+..+++|+.
T Consensus        17 ~~~~~~l~-~g~~V~~~~r~~~~~~~D~~~~~~~~~~~~~~----~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~   91 (202)
T 3d7l_A           17 SAVKERLE-KKAEVITAGRHSGDVTVDITNIDSIKKMYEQV----GKVDAIVSATGSATFSPLTELTPEKNAVTISSKLG   91 (202)
T ss_dssp             HHHHHHHT-TTSEEEEEESSSSSEECCTTCHHHHHHHHHHH----CCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTH
T ss_pred             HHHHHHHH-CCCeEEEEecCccceeeecCCHHHHHHHHHHh----CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhccH
Confidence            44566666 6655543       479999999999988765    89999999999877777888899999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.+++++.+.|.+          +++||++||..+..+.++...|+++|++++.|+++++.|+  ++||+++.|+||+
T Consensus        92 ~~~~l~~~~~~~~~~----------~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~~~~~~e~--~~gi~v~~v~pg~  159 (202)
T 3d7l_A           92 GQINLVLLGIDSLND----------KGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEM--PRGIRINTVSPNV  159 (202)
T ss_dssp             HHHHHHHTTGGGEEE----------EEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHTTSC--STTCEEEEEEECC
T ss_pred             HHHHHHHHHHHHhcc----------CCEEEEEcchhhcCCCCccHHHHHHHHHHHHHHHHHHHHc--cCCeEEEEEecCc
Confidence            999999999998854          4789999999998888899999999999999999999987  5699999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEec
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVD  218 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~d  218 (257)
                      +.|++.           ...+..+...+.+++|+|+.++++++   .+.+|+.+++|
T Consensus       160 v~~~~~-----------~~~~~~~~~~~~~~~dva~~~~~~~~---~~~~G~~~~vd  202 (202)
T 3d7l_A          160 LEESWD-----------KLEPFFEGFLPVPAAKVARAFEKSVF---GAQTGESYQVY  202 (202)
T ss_dssp             BGGGHH-----------HHGGGSTTCCCBCHHHHHHHHHHHHH---SCCCSCEEEEC
T ss_pred             cCCchh-----------hhhhhccccCCCCHHHHHHHHHHhhh---ccccCceEecC
Confidence            998742           11223345668899999999998883   45789998876

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.92  E-value=2.1e-24  Score=176.73  Aligned_cols=195  Identities=19%  Similarity=0.254  Sum_probs=151.6

Q ss_pred             HHHHHHHHhcCCCeEEE-----------EccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHH
Q 025124            9 RSAVAALHSLGIPAIGL-----------EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIE   77 (257)
Q Consensus         9 ~~~~~~l~~~~~~~~~~-----------~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~   77 (257)
                      ..++..|.+.|.++..+           .+|+++.++++.+++++   .+++|+||||||....       .+.++..++
T Consensus        15 ~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~D~~~~~~~~~~~~~~---~~~~d~vi~~Ag~~~~-------~~~~~~~~~   84 (255)
T 2dkn_A           15 AALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRC---GGVLDGLVCCAGVGVT-------AANSGLVVA   84 (255)
T ss_dssp             HHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHHHH---TTCCSEEEECCCCCTT-------SSCHHHHHH
T ss_pred             HHHHHHHHhCCCEEEEEeCChhHccccccCCcccHHHHHHHHHHc---CCCccEEEECCCCCCc-------chhHHHHHH
Confidence            45666677767665544           47888888888877754   3789999999996542       134788999


Q ss_pred             HHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccccc--------------------------ccchhhHHH
Q 025124           78 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--------------------------WYQIHVSAA  131 (257)
Q Consensus        78 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~--------------------------~~~~~Y~~s  131 (257)
                      +|+.+++.+++++++.|.+.+        .++||++||..+..+.                          ++...|+++
T Consensus        85 ~N~~~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s  156 (255)
T 2dkn_A           85 VNYFGVSALLDGLAEALSRGQ--------QPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQTHLAYAGS  156 (255)
T ss_dssp             HHTHHHHHHHHHHHHHHHTSS--------SCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCCHHHHHHHH
T ss_pred             HHhHHHHHHHHHHHHHhhhcC--------CceEEEEeccccccccccccchhhhhcccchhhhhhhccccCCcchhHHHH
Confidence            999999999999999998765        6899999999887654                          466789999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHHHHhhhhc--cCCCCCCHHhHHHHHHHhccCCCCc
Q 025124          132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM--AAYKFGEKWDIAMAALYLASDAGKY  209 (257)
Q Consensus       132 K~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~dva~~~~~l~~~~~~~  209 (257)
                      |++++.+++.++.++. ++||++++++||++.|++...... ...........  +.+++.+++|+|+++++++++...+
T Consensus       157 K~a~~~~~~~~~~~~~-~~gi~v~~v~pg~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  234 (255)
T 2dkn_A          157 KYAVTCLARRNVVDWA-GRGVRLNVVAPGAVETPLLQASKA-DPRYGESTRRFVAPLGRGSEPREVAEAIAFLLGPQASF  234 (255)
T ss_dssp             HHHHHHHHHHTHHHHH-HTTCEEEEEEECCBCSHHHHHHHH-CTTTHHHHHSCCCTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHh-hcCcEEEEEcCCcccchhhhhccc-chhhHHHHHHHHHHhcCCCCHHHHHHHHHHHhCCCccc
Confidence            9999999999999998 889999999999999875421100 00001111111  5667899999999999999887778


Q ss_pred             ccCcEEEecCCccc
Q 025124          210 VNGNTLIVDGGNWL  223 (257)
Q Consensus       210 ~~G~~~~~dgg~~~  223 (257)
                      ++|+.+.++||..+
T Consensus       235 ~~G~~~~v~gg~~~  248 (255)
T 2dkn_A          235 IHGSVLFVDGGMDA  248 (255)
T ss_dssp             CCSCEEEESTTHHH
T ss_pred             ceeeEEEecCCeEe
Confidence            99999999999654

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.91  E-value=3.4e-24  Score=192.51  Aligned_cols=184  Identities=14%  Similarity=0.080  Sum_probs=152.0

Q ss_pred             HHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHH
Q 025124            5 KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF   84 (257)
Q Consensus         5 ~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~   84 (257)
                      .++++++.+++.+.|.++.++.||++|.++++++++++. ++++||+||||||+.....+.+.+.++|+.++++|+.|++
T Consensus       300 ~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~-~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~  378 (525)
T 3qp9_A          300 DSGLAGLVAELADLGATATVVTCDLTDAEAAARLLAGVS-DAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAAL  378 (525)
T ss_dssp             ---CHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHTSC-TTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHhcCCEEEEEECCCCCHHHHHHHHHHHH-hcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHH
Confidence            466788889998889999999999999999999999998 7899999999999988899999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccC
Q 025124           85 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD  164 (257)
Q Consensus        85 ~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t  164 (257)
                      ++.+.+.+.+++++.       .+.||++||..+..+.++++.|+++|+++++|+    .++. ..||++++|+||++.|
T Consensus       379 ~L~~~~~~~~~~~~~-------~~~iV~~SS~a~~~g~~g~~~YaaaKa~l~~lA----~~~~-~~gi~v~sI~pG~~~t  446 (525)
T 3qp9_A          379 HLDRLLREAAAAGGR-------PPVLVLFSSVAAIWGGAGQGAYAAGTAFLDALA----GQHR-ADGPTVTSVAWSPWEG  446 (525)
T ss_dssp             HHHHHHHHTC----C-------CCEEEEEEEGGGTTCCTTCHHHHHHHHHHHHHH----TSCC-SSCCEEEEEEECCBTT
T ss_pred             HHHHHhccccccCCC-------CCEEEEECCHHHcCCCCCCHHHHHHHHHHHHHH----HHHH-hCCCCEEEEECCcccc
Confidence            999999999876531       478999999999999999999999999999885    4566 7899999999999988


Q ss_pred             CCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCC
Q 025124          165 TAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG  207 (257)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  207 (257)
                      +|....    .....+ ... ....++|+++++.+.++++...
T Consensus       447 gm~~~~----~~~~~~-~~~-g~~~l~pee~a~~l~~~l~~~~  483 (525)
T 3qp9_A          447 SRVTEG----ATGERL-RRL-GLRPLAPATALTALDTALGHGD  483 (525)
T ss_dssp             SGGGSS----HHHHHH-HHT-TBCCBCHHHHHHHHHHHHHHTC
T ss_pred             ccccch----hhHHHH-Hhc-CCCCCCHHHHHHHHHHHHhCCC
Confidence            876321    111111 111 1245799999999999997543

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.86  E-value=1.7e-22  Score=189.40  Aligned_cols=185  Identities=18%  Similarity=0.053  Sum_probs=148.9

Q ss_pred             CCc---HHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHH
Q 025124            2 GRR---KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI   78 (257)
Q Consensus         2 ~r~---~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~   78 (257)
                      +|+   .++++++++++++.|.++.++.||++|.++++++++++.+++ +||++|||||+.....+.+++.++|+..+++
T Consensus       563 ~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~~~-~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~  641 (795)
T 3slk_A          563 SRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPDEH-PLTAVVHAAGVLDDGVSESLTVERLDQVLRP  641 (795)
T ss_dssp             ESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTS-CEEEEEECCCCCCCCCGGGCCHHHHHHHHCC
T ss_pred             ccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC-CCEEEEECCCcCCCCchhhCCHHHHHHHHHH
Confidence            466   456788889999889999999999999999999999998876 9999999999988899999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      |+.|++++++++.+.|              +||++||.++..+.++++.|+++|+    |+++|++++. +.||++++|+
T Consensus       642 nv~G~~~l~~~~~~~l--------------~iV~~SS~ag~~g~~g~~~YaAaka----~~~alA~~~~-~~Gi~v~sI~  702 (795)
T 3slk_A          642 KVDGARNLLELIDPDV--------------ALVLFSSVSGVLGSGGQGNYAAANS----FLDALAQQRQ-SRGLPTRSLA  702 (795)
T ss_dssp             CCCHHHHHHHHSCTTS--------------EEEEEEETHHHHTCSSCHHHHHHHH----HHHHHHHHHH-HTTCCEEEEE
T ss_pred             HHHHHHHHHHHHhhCC--------------EEEEEccHHhcCCCCCCHHHHHHHH----HHHHHHHHHH-HcCCeEEEEE
Confidence            9999999999987655              3999999999999999999999996    5556666666 7799999999


Q ss_pred             cCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCc
Q 025124          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKY  209 (257)
Q Consensus       159 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  209 (257)
                      ||++.|+++..... +... ........ ...++++....+..++......
T Consensus       703 pG~v~t~g~~~~~~-~~~~-~~~~~~g~-~~l~~~e~~~~~~~~l~~~~~~  750 (795)
T 3slk_A          703 WGPWAEHGMASTLR-EAEQ-DRLARSGL-LPISTEEGLSQFDAACGGAHTV  750 (795)
T ss_dssp             ECCCSCCCHHHHHH-HHHH-HHHHHTTB-CCCCHHHHHHHHHHHHTSSCSS
T ss_pred             CCeECcchhhcccc-HHHH-HHHHhcCC-CCCCHHHHHHHHHHHHhCCCcE
Confidence            99999875432211 1111 11122222 3467788888877777654433

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.86  E-value=6.9e-22  Score=202.65  Aligned_cols=204  Identities=14%  Similarity=0.035  Sum_probs=146.6

Q ss_pred             HHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHH----HhCCccEEEeCCCC----CC-CCCCCCCCHHHH----HH
Q 025124            8 LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN----HFGKLDILVNAAAG----NF-LVPAEDLSPNGF----RT   74 (257)
Q Consensus         8 l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~----~~g~id~li~~ag~----~~-~~~~~~~~~~~~----~~   74 (257)
                      ++++.+++...|.++..+.||++|.++++++++++.+    ++|+||+||||||+    .. .....+.+.++|    +.
T Consensus      2179 ~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~ 2258 (3089)
T 3zen_D         2179 YKQLYRDHARFDATLWVVPANMASYSDIDKLVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEM 2258 (3089)
T ss_dssp             HHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHH
T ss_pred             HHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHH
Confidence            6677777766677899999999999999999999998    89999999999997    11 123333344444    44


Q ss_pred             HHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHH--hcCCCCe
Q 025124           75 VIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE--WGTDYAI  152 (257)
Q Consensus        75 ~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e--~~~~~gi  152 (257)
                      .+++|+.+++.+++.+.+.|.++..+.    ..+.++++++..+.  .++.+.|++||+|+++|+++++.|  ++  .+|
T Consensus      2259 ~~~vnl~~~~~l~~~~~~~m~~~~~g~----~~~ii~~~ss~~g~--~g~~~aYsASKaAl~~LtrslA~E~~~a--~~I 2330 (3089)
T 3zen_D         2259 EMKVLLWAVQRLISGLSKIGAERDIAS----RLHVVLPGSPNRGM--FGGDGAYGEAKSALDALENRWSAEKSWA--ERV 2330 (3089)
T ss_dssp             HHHHHTHHHHHHHHHHHHHHHHTTCCC----CEEEEEEECSSTTS--CSSCSSHHHHGGGHHHHHHHHHHCSTTT--TTE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCCc----eeEEEEECCccccc--CCCchHHHHHHHHHHHHHHHHHhccccC--CCe
Confidence            599999999999999999998764211    01233334443332  234568999999999999999999  65  469


Q ss_pred             EEEEEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcc-cCcEEEec--CCccc
Q 025124          153 RVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYV-NGNTLIVD--GGNWL  223 (257)
Q Consensus       153 ~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~-~G~~~~~d--gg~~~  223 (257)
                      +||+|+||++.|+.+......   ........+. +..+|+|+|..++||+++.++++ +|+.+.+|  ||+..
T Consensus      2331 rVn~v~PG~v~tT~l~~~~~~---~~~~~~~~~~-r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~ 2400 (3089)
T 3zen_D         2331 SLAHALIGWTKGTGLMGQNDA---IVSAVEEAGV-TTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGD 2400 (3089)
T ss_dssp             EEEEEECCCEECSTTTTTTTT---THHHHGGGSC-BCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSS
T ss_pred             EEEEEeecccCCCcccccchh---HHHHHHhcCC-CCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCc
Confidence            999999999994433222111   1111222332 44599999999999999887764 55666666  88743

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.86  E-value=9.1e-22  Score=175.09  Aligned_cols=180  Identities=13%  Similarity=0.056  Sum_probs=145.7

Q ss_pred             HHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC-CCCCCCCCCHHHHHHHHHHHhHHH
Q 025124            5 KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGT   83 (257)
Q Consensus         5 ~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~   83 (257)
                      .+.++++.+++.+.|.++.++.||++|.++++++++++.++ ++||+||||||+. ...++.+.+.++|+.++++|+.|+
T Consensus       277 ~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~-g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~  355 (496)
T 3mje_A          277 APGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED-APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAA  355 (496)
T ss_dssp             STTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT-SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHH
T ss_pred             hHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh-CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHH
Confidence            34577888889888999999999999999999999998777 7999999999987 678899999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccc
Q 025124           84 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK  163 (257)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~  163 (257)
                      +++.+.+.+.    .        .++||++||..+..+.++++.|+++|+++++|++.++     ..||++++|+||.+.
T Consensus       356 ~~L~~~~~~~----~--------~~~iV~~SS~a~~~g~~g~~~YaAaKa~ldala~~~~-----~~Gi~v~sV~pG~w~  418 (496)
T 3mje_A          356 RHLHELTADL----D--------LDAFVLFSSGAAVWGSGGQPGYAAANAYLDALAEHRR-----SLGLTASSVAWGTWG  418 (496)
T ss_dssp             HHHHHHHTTS----C--------CSEEEEEEEHHHHTTCTTCHHHHHHHHHHHHHHHHHH-----HTTCCCEEEEECEES
T ss_pred             HHHHHHhhcc----C--------CCEEEEEeChHhcCCCCCcHHHHHHHHHHHHHHHHHH-----hcCCeEEEEECCccc
Confidence            9998876543    3        5789999999999999999999999999999988544     558999999999998


Q ss_pred             CCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCC
Q 025124          164 DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG  207 (257)
Q Consensus       164 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  207 (257)
                      ++.+....   .....+.. .. ...++|++.++.+.+++....
T Consensus       419 ~~gm~~~~---~~~~~l~~-~g-~~~l~pe~~~~~l~~~l~~~~  457 (496)
T 3mje_A          419 EVGMATDP---EVHDRLVR-QG-VLAMEPEHALGALDQMLENDD  457 (496)
T ss_dssp             SSCC---------CHHHHH-TT-EEEECHHHHHHHHHHHHHHTC
T ss_pred             CCccccCh---HHHHHHHh-cC-CCCCCHHHHHHHHHHHHcCCC
Confidence            76543221   11111111 11 123689999999999997543

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.82  E-value=5.4e-20  Score=163.94  Aligned_cols=181  Identities=13%  Similarity=-0.008  Sum_probs=142.9

Q ss_pred             CCcHH---HHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHH
Q 025124            2 GRRKT---VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI   78 (257)
Q Consensus         2 ~r~~~---~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~   78 (257)
                      +|+..   .++++.+++.+.|.++.++.||++|.++++.+++++ .++++||+||||||+.....+.+.+.++++.++++
T Consensus       258 ~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~  336 (486)
T 2fr1_A          258 SRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-GDDVPLSAVFHAAATLDDGTVDTLTGERIERASRA  336 (486)
T ss_dssp             ESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-CTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHH
T ss_pred             cCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-HhcCCCcEEEECCccCCCCccccCCHHHHHHHHHH
Confidence            45543   567788888888889999999999999999999998 56789999999999888888889999999999999


Q ss_pred             HhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      |+.|++++.+.+.+    .+        .++||++||..+..+.++++.|+++|+++++|++.++     ..|+++++|+
T Consensus       337 nv~g~~~L~~~~~~----~~--------~~~~V~~SS~a~~~g~~g~~~Yaaaka~l~~la~~~~-----~~gi~v~~i~  399 (486)
T 2fr1_A          337 KVLGARNLHELTRE----LD--------LTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQQRR-----SDGLPATAVA  399 (486)
T ss_dssp             HHHHHHHHHHHHTT----SC--------CSEEEEEEEHHHHTCCTTCTTTHHHHHHHHHHHHHHH-----HTTCCCEEEE
T ss_pred             HHHHHHHHHHHhCc----CC--------CCEEEEEcChHhcCCCCCCHHHHHHHHHHHHHHHHHH-----hcCCeEEEEE
Confidence            99999999987643    23        5889999999999999999999999999999876544     4589999999


Q ss_pred             cCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCC
Q 025124          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (257)
Q Consensus       159 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  206 (257)
                      ||.+.++.+....    ....+..  .....++++++++.+..++...
T Consensus       400 pG~~~~~gm~~~~----~~~~~~~--~g~~~i~~e~~a~~l~~~l~~~  441 (486)
T 2fr1_A          400 WGTWAGSGMAEGP----VADRFRR--HGVIEMPPETACRALQNALDRA  441 (486)
T ss_dssp             ECCBC----------------CTT--TTEECBCHHHHHHHHHHHHHTT
T ss_pred             CCeeCCCcccchh----HHHHHHh--cCCCCCCHHHHHHHHHHHHhCC
Confidence            9999876322111    1111110  1113579999999999999754

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.79  E-value=9.7e-19  Score=156.54  Aligned_cols=172  Identities=16%  Similarity=0.070  Sum_probs=139.6

Q ss_pred             HHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHH
Q 025124            7 VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM   86 (257)
Q Consensus         7 ~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l   86 (257)
                      .++++.+++.+.+.++.++.||++|.++++.++++     +++|+||||||+.....+.+.+.++|+.++++|+.|++++
T Consensus       299 ~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~-----~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L  373 (511)
T 2z5l_A          299 GAAELAEELRGHGCEVVHAACDVAERDALAALVTA-----YPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELL  373 (511)
T ss_dssp             THHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH-----SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc-----CCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHH
Confidence            46778888888888899999999999999998876     7899999999988888888999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcc-cCC
Q 025124           87 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI-KDT  165 (257)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v-~t~  165 (257)
                      .+.+.+. .  +        .++||++||..+..+.++++.|+++|+++++|++.++     ..|+++++|+||++ .|.
T Consensus       374 ~~~~~~~-~--~--------~~~~V~~SS~a~~~g~~g~~~YaaaKa~ld~la~~~~-----~~gi~v~sv~pG~~~~tg  437 (511)
T 2z5l_A          374 HQLTADI-K--G--------LDAFVLFSSVTGTWGNAGQGAYAAANAALDALAERRR-----AAGLPATSVAWGLWGGGG  437 (511)
T ss_dssp             HHHTSSC-T--T--------CCCEEEEEEGGGTTCCTTBHHHHHHHHHHHHHHHHHH-----TTTCCCEEEEECCBCSTT
T ss_pred             HHHHhhc-c--C--------CCEEEEEeCHHhcCCCCCCHHHHHHHHHHHHHHHHHH-----HcCCcEEEEECCcccCCc
Confidence            8876421 1  2        5789999999999999999999999999999998653     56899999999999 555


Q ss_pred             CCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCC
Q 025124          166 AGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (257)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  206 (257)
                      |... .   . ..... . .....++++++++.+..++...
T Consensus       438 m~~~-~---~-~~~~~-~-~g~~~l~~e~~a~~l~~al~~~  471 (511)
T 2z5l_A          438 MAAG-A---G-EESLS-R-RGLRAMDPDAAVDALLGAMGRN  471 (511)
T ss_dssp             CCCC-H---H-HHHHH-H-HTBCCBCHHHHHHHHHHHHHHT
T ss_pred             cccc-c---c-HHHHH-h-cCCCCCCHHHHHHHHHHHHhCC
Confidence            4322 1   1 11111 1 1124689999999999999643

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.72  E-value=2.3e-16  Score=135.28  Aligned_cols=202  Identities=18%  Similarity=0.104  Sum_probs=144.6

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|++|.+++.+++++.     ++|+|||+||....    +.+.++++..+++|+.+++++++++.+.|..-+.
T Consensus        50 ~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~  120 (361)
T 1kew_A           50 NRYNFEHADICDSAEITRIFEQY-----QPDAVMHLAAESHV----DRSITGPAAFIETNIVGTYALLEVARKYWSALGE  120 (361)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCCH----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCH
T ss_pred             CCeEEEECCCCCHHHHHHHHhhc-----CCCEEEECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCccc
Confidence            46888999999999999888752     79999999996431    2244567889999999999999999998753100


Q ss_pred             CCCCCCCCceEEEEccccccc---------------------ccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124          100 GQASSSSGGIIINISATLHYT---------------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~---------------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      .+   ...++||++||...+.                     +..+...|+.+|.+.+.+++.++.++    |++++.++
T Consensus       121 ~~---~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----gi~~~~vr  193 (361)
T 1kew_A          121 DK---KNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY----GLPTIVTN  193 (361)
T ss_dssp             HH---HHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEE
T ss_pred             cc---ccCceEEEeCCHHHhCCCcccccccccccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh----CCcEEEEe
Confidence            00   0025899999975432                     12345689999999999999999875    59999999


Q ss_pred             cCcccCCCCCCCCChHHHHHHhhhhc---------cCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCC
Q 025124          159 PGPIKDTAGVSKLAPEEIRSKATDYM---------AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDL  229 (257)
Q Consensus       159 Pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~  229 (257)
                      |+.+.++..........+........         ....+.+++|+|+++++++...   .+|+.+++++|..+.     
T Consensus       194 p~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~---~~g~~~~v~~~~~~s-----  265 (361)
T 1kew_A          194 CSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEG---KAGETYNIGGHNEKK-----  265 (361)
T ss_dssp             ECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCCEEE-----
T ss_pred             eceeECCCCCcccHHHHHHHHHHcCCCceEcCCCceeEeeEEHHHHHHHHHHHHhCC---CCCCEEEecCCCeee-----
Confidence            99999886532211122222222211         1224678999999999999653   478999999986554     


Q ss_pred             cHHHHHHHHHHHhccC
Q 025124          230 PKEAVNQLSRAVERKS  245 (257)
Q Consensus       230 ~~~~~~~~~~~~~~~~  245 (257)
                      ..++...+.+....+.
T Consensus       266 ~~e~~~~i~~~~g~~~  281 (361)
T 1kew_A          266 NLDVVFTICDLLDEIV  281 (361)
T ss_dssp             HHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHhCCcC
Confidence            4667777777766553

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.71  E-value=1.5e-16  Score=134.31  Aligned_cols=191  Identities=15%  Similarity=0.099  Sum_probs=140.6

Q ss_pred             eEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCC
Q 025124           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ  101 (257)
Q Consensus        22 ~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  101 (257)
                      +.++.+|++|.++++.+++.     +++|+|||+||....    +.+.++++..+++|+.++.++++++ +.+.  +   
T Consensus        53 ~~~~~~Dl~d~~~~~~~~~~-----~~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~--~---  117 (321)
T 2pk3_A           53 VEMISLDIMDSQRVKKVISD-----IKPDYIFHLAAKSSV----KDSWLNKKGTFSTNVFGTLHVLDAV-RDSN--L---  117 (321)
T ss_dssp             EEEEECCTTCHHHHHHHHHH-----HCCSEEEECCSCCCH----HHHTTCHHHHHHHHHHHHHHHHHHH-HHHT--C---
T ss_pred             eeEEECCCCCHHHHHHHHHh-----cCCCEEEEcCcccch----hhhhhcHHHHHHHHHHHHHHHHHHH-HHhC--C---
Confidence            56778999999999988875     379999999996432    1223467889999999999999999 5552  2   


Q ss_pred             CCCCCCceEEEEccccccccc-------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCC
Q 025124          102 ASSSSGGIIINISATLHYTAT-------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  168 (257)
Q Consensus       102 ~~~~~~g~ii~iss~~~~~~~-------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~  168 (257)
                           .++||++||...+.+.             .+...|+.+|.+.+.+++.++.++    |++++.++|+.+.++...
T Consensus       118 -----~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~ilrp~~v~g~~~~  188 (321)
T 2pk3_A          118 -----DCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGMLARQYVKAY----GMDIIHTRTFNHIGPGQS  188 (321)
T ss_dssp             -----CCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEECTTCC
T ss_pred             -----CCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHc----CCCEEEEEeCcccCcCCC
Confidence                 5789999998655432             356789999999999999998764    699999999999988654


Q ss_pred             CCCChHHHHHHhhh---h-----------ccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHH
Q 025124          169 SKLAPEEIRSKATD---Y-----------MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAV  234 (257)
Q Consensus       169 ~~~~~~~~~~~~~~---~-----------~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~  234 (257)
                      .......+......   .           .+...+.+++|+|+++++++...   .+|+.+++++|..+.     ..++.
T Consensus       189 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~---~~g~~~~i~~~~~~s-----~~e~~  260 (321)
T 2pk3_A          189 LGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYG---KTGDVYNVCSGIGTR-----IQDVL  260 (321)
T ss_dssp             TTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEESCSCEEE-----HHHHH
T ss_pred             CCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhCC---CCCCeEEeCCCCCee-----HHHHH
Confidence            32111222222211   1           11223678999999999999754   468899999886554     56777


Q ss_pred             HHHHHHHhcc
Q 025124          235 NQLSRAVERK  244 (257)
Q Consensus       235 ~~~~~~~~~~  244 (257)
                      +.+.+....+
T Consensus       261 ~~i~~~~g~~  270 (321)
T 2pk3_A          261 DLLLAMANVK  270 (321)
T ss_dssp             HHHHHHSSSC
T ss_pred             HHHHHHhCCC
Confidence            7777777654

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.70  E-value=5.5e-16  Score=131.60  Aligned_cols=191  Identities=15%  Similarity=0.061  Sum_probs=140.2

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|++|.+++++++       +++|+|||+||....    +.+.++++..+++|+.++.++++++.+.   .. 
T Consensus        54 ~~~~~~~~Dl~d~~~~~~~~-------~~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~-  118 (336)
T 2hun_A           54 PRYTFVKGDVADYELVKELV-------RKVDGVVHLAAESHV----DRSISSPEIFLHSNVIGTYTLLESIRRE---NP-  118 (336)
T ss_dssp             TTEEEEECCTTCHHHHHHHH-------HTCSEEEECCCCCCH----HHHHHCTHHHHHHHHHHHHHHHHHHHHH---CT-
T ss_pred             CceEEEEcCCCCHHHHHHHh-------hCCCEEEECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CC-
Confidence            46788999999999988877       379999999996431    1234567789999999999999999876   11 


Q ss_pred             CCCCCCCCceEEEEccccccc-----------ccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCC
Q 025124          100 GQASSSSGGIIINISATLHYT-----------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  168 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~-----------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~  168 (257)
                             .++||++||...+.           +..+...|+.+|.+.+.+++.++.++    |++++.++|+.+.++...
T Consensus       119 -------~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~ilrp~~v~g~~~~  187 (336)
T 2hun_A          119 -------EVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDMLVLGWTRTY----NLNASITRCTNNYGPYQF  187 (336)
T ss_dssp             -------TSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHHHHHHHHHHHHHHHT----TCEEEEEEECEEESTTCC
T ss_pred             -------CcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh----CCCEEEEeeeeeeCcCCC
Confidence                   36899999976432           23345689999999999999998764    699999999999988643


Q ss_pred             CCCChHHHHHHhhhhc---------cCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHHHH
Q 025124          169 SKLAPEEIRSKATDYM---------AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSR  239 (257)
Q Consensus       169 ~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~  239 (257)
                      .......+........         ....+.+++|+|+++++++...   .+|+.+++++|..+.     ..++.+.+.+
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~---~~g~~~~v~~~~~~s-----~~e~~~~i~~  259 (336)
T 2hun_A          188 PEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKG---ESREIYNISAGEEKT-----NLEVVKIILR  259 (336)
T ss_dssp             TTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCSCEEC-----HHHHHHHHHH
T ss_pred             cCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCC---CCCCEEEeCCCCccc-----HHHHHHHHHH
Confidence            2111122222222111         1234678999999999999643   368999999886554     4677777777


Q ss_pred             HHhcc
Q 025124          240 AVERK  244 (257)
Q Consensus       240 ~~~~~  244 (257)
                      ....+
T Consensus       260 ~~g~~  264 (336)
T 2hun_A          260 LMGKG  264 (336)
T ss_dssp             HTTCC
T ss_pred             HhCCC
Confidence            77654

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.70  E-value=7.9e-16  Score=131.05  Aligned_cols=196  Identities=16%  Similarity=0.084  Sum_probs=142.7

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|++|.++++.+++..     ++|+|||+||....    +.+.++++..+++|+.++.++++++.+.+.    
T Consensus        50 ~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~----  116 (347)
T 1orr_A           50 GNFEFVHGDIRNKNDVTRLITKY-----MPDSCFHLAGQVAM----TTSIDNPCMDFEINVGGTLNLLEAVRQYNS----  116 (347)
T ss_dssp             CCCEEEECCTTCHHHHHHHHHHH-----CCSEEEECCCCCCH----HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT----
T ss_pred             CceEEEEcCCCCHHHHHHHHhcc-----CCCEEEECCcccCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC----
Confidence            46889999999999999888752     69999999996432    123457788999999999999999987642    


Q ss_pred             CCCCCCCCceEEEEccccccc---------------------------ccccchhhHHHHHHHHHHHHHHHHHhcCCCCe
Q 025124          100 GQASSSSGGIIINISATLHYT---------------------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAI  152 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~---------------------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi  152 (257)
                             .++||++||...+.                           +..+...|+.+|.+.+.+++.++.++    |+
T Consensus       117 -------~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi  185 (347)
T 1orr_A          117 -------NCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF----GL  185 (347)
T ss_dssp             -------TCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH----CC
T ss_pred             -------CceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh----CC
Confidence                   35799999976542                           12345789999999999999999875    59


Q ss_pred             EEEEEecCcccCCCCCCCCCh---HHHHHHhhhhc-----cC---------CCCCCHHhHHHHHHHhccCCCCcccCcEE
Q 025124          153 RVNGIAPGPIKDTAGVSKLAP---EEIRSKATDYM-----AA---------YKFGEKWDIAMAALYLASDAGKYVNGNTL  215 (257)
Q Consensus       153 ~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~~~~~-----~~---------~~~~~~~dva~~~~~l~~~~~~~~~G~~~  215 (257)
                      +++.++||.+.++........   ..+........     +.         ..+.+++|+|+++++++.. ....+|+.+
T Consensus       186 ~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~-~~~~~g~~~  264 (347)
T 1orr_A          186 NTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALAN-VSKIRGNAF  264 (347)
T ss_dssp             EEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHT-HHHHTTCEE
T ss_pred             cEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhc-cccCCCCEE
Confidence            999999999998865322111   11111111111     11         1256899999999999963 234679999


Q ss_pred             EecCCcc--cCCCCCCcHHHHHHHHHHHhccC
Q 025124          216 IVDGGNW--LSNPRDLPKEAVNQLSRAVERKS  245 (257)
Q Consensus       216 ~~dgg~~--~~~~~~~~~~~~~~~~~~~~~~~  245 (257)
                      ++++|..  +.     ..++...|.+....+.
T Consensus       265 ~v~~~~~~~~s-----~~e~~~~i~~~~g~~~  291 (347)
T 1orr_A          265 NIGGTIVNSLS-----LLELFKLLEDYCNIDM  291 (347)
T ss_dssp             EESSCGGGEEE-----HHHHHHHHHHHHTCCC
T ss_pred             EeCCCCCCCcc-----HHHHHHHHHHHhCCCC
Confidence            9998852  33     4667777777776653

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.69  E-value=8.7e-17  Score=130.06  Aligned_cols=168  Identities=20%  Similarity=0.169  Sum_probs=124.7

Q ss_pred             CCcHHHHHHHHHHHHhcCCCe-EEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            2 GRRKTVLRSAVAALHSLGIPA-IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~-~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      +|++++++++.+      .++ .++.+|++         +.+.+.++++|+||||||....        ++++..+++|+
T Consensus        52 ~R~~~~~~~~~~------~~~~~~~~~Dl~---------~~~~~~~~~~D~vi~~ag~~~~--------~~~~~~~~~n~  108 (236)
T 3e8x_A           52 VRNEEQGPELRE------RGASDIVVANLE---------EDFSHAFASIDAVVFAAGSGPH--------TGADKTILIDL  108 (236)
T ss_dssp             ESSGGGHHHHHH------TTCSEEEECCTT---------SCCGGGGTTCSEEEECCCCCTT--------SCHHHHHHTTT
T ss_pred             ECChHHHHHHHh------CCCceEEEcccH---------HHHHHHHcCCCEEEECCCCCCC--------CCccccchhhH
Confidence            466665554322      257 88999998         3445556789999999996532        45788999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccccc---ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEE
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT---WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~---~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v  157 (257)
                      .+++++++++.+    .+        .++||++||.++..+.   .....|+.+|.+++.+++        ..|++++.+
T Consensus       109 ~~~~~l~~a~~~----~~--------~~~iv~~SS~~~~~~~~~~~~~~~Y~~sK~~~e~~~~--------~~gi~~~~l  168 (236)
T 3e8x_A          109 WGAIKTIQEAEK----RG--------IKRFIMVSSVGTVDPDQGPMNMRHYLVAKRLADDELK--------RSSLDYTIV  168 (236)
T ss_dssp             HHHHHHHHHHHH----HT--------CCEEEEECCTTCSCGGGSCGGGHHHHHHHHHHHHHHH--------HSSSEEEEE
T ss_pred             HHHHHHHHHHHH----cC--------CCEEEEEecCCCCCCCCChhhhhhHHHHHHHHHHHHH--------HCCCCEEEE
Confidence            999999998843    23        5789999998777665   567899999999998876        347999999


Q ss_pred             ecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCC
Q 025124          158 APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG  220 (257)
Q Consensus       158 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg  220 (257)
                      +||++.+++.......      .........+.+++|+|+++++++..+.  ..|+.+.+++|
T Consensus       169 rpg~v~~~~~~~~~~~------~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g~~~~v~~~  223 (236)
T 3e8x_A          169 RPGPLSNEESTGKVTV------SPHFSEITRSITRHDVAKVIAELVDQQH--TIGKTFEVLNG  223 (236)
T ss_dssp             EECSEECSCCCSEEEE------ESSCSCCCCCEEHHHHHHHHHHHTTCGG--GTTEEEEEEEC
T ss_pred             eCCcccCCCCCCeEEe------ccCCCcccCcEeHHHHHHHHHHHhcCcc--ccCCeEEEeCC
Confidence            9999998754222110      0011123457899999999999997643  67999999887

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.69  E-value=2.8e-16  Score=133.71  Aligned_cols=216  Identities=13%  Similarity=0.029  Sum_probs=147.3

Q ss_pred             CCcHHHHHHHHHHHHhc-CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            2 GRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      +|+.+...+..+.+.+. +.++.++.+|++|.+++++++++     +++|+|||+||......    ..+..+..+++|+
T Consensus        36 ~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~vih~A~~~~~~~----~~~~~~~~~~~n~  106 (341)
T 3enk_A           36 DNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA-----HPITAAIHFAALKAVGE----SVAKPIEYYRNNL  106 (341)
T ss_dssp             CCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH-----SCCCEEEECCCCCCHHH----HHHCHHHHHHHHH
T ss_pred             ecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc-----cCCcEEEECccccccCc----cccChHHHHHHHH
Confidence            34444444444444433 56788999999999999998875     48999999999654321    2344457888999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccc-----------cccchhhHHHHHHHHHHHHHHHHHhcCC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-----------TWYQIHVSAAKAAVDSITRSLALEWGTD  149 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~-----------~~~~~~Y~~sK~a~~~l~~~la~e~~~~  149 (257)
                      .+++++++++    .+.+        .++||++||...+..           ......|+.+|.+.+.+++.++.++.  
T Consensus       107 ~~~~~l~~~~----~~~~--------~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--  172 (341)
T 3enk_A          107 DSLLSLLRVM----RERA--------VKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQILRDVEAADP--  172 (341)
T ss_dssp             HHHHHHHHHH----HHTT--------CCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHCT--
T ss_pred             HHHHHHHHHH----HhCC--------CCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhhcCC--
Confidence            9998887764    4443        578999999765521           22346899999999999999998864  


Q ss_pred             CCeEEEEEecCcccCCCCCCCC--------C--hHHHHHHhhhh----------------ccCCCCCCHHhHHHHHHHhc
Q 025124          150 YAIRVNGIAPGPIKDTAGVSKL--------A--PEEIRSKATDY----------------MAAYKFGEKWDIAMAALYLA  203 (257)
Q Consensus       150 ~gi~v~~v~Pg~v~t~~~~~~~--------~--~~~~~~~~~~~----------------~~~~~~~~~~dva~~~~~l~  203 (257)
                       +++++.++|+.+..+.....+        .  ...........                .....+.+++|+|++++.++
T Consensus       173 -~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~  251 (341)
T 3enk_A          173 -SWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVDLARGHIAAL  251 (341)
T ss_dssp             -TCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHH
T ss_pred             -CceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHHHHHHHHHHHH
Confidence             699999999999876321100        0  01111111111                11123567899999999998


Q ss_pred             cCCCCcccCcEEEecCCcccCCCCCCcHHHHHHHHHHHhccCC
Q 025124          204 SDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKSR  246 (257)
Q Consensus       204 ~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (257)
                      ........|+.+++.+|..+.     ..++.+.|.+...++..
T Consensus       252 ~~~~~~~~~~~~ni~~~~~~s-----~~e~~~~i~~~~g~~~~  289 (341)
T 3enk_A          252 DALERRDASLTVNLGTGRGYS-----VLEVVRAFEKASGRAVP  289 (341)
T ss_dssp             HHHHHHTSCEEEEESCSCCEE-----HHHHHHHHHHHHCSCCC
T ss_pred             HhhhcCCcceEEEeCCCCcee-----HHHHHHHHHHHhCCCcc
Confidence            643223468999999886554     57778888888776543

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.69  E-value=7.2e-16  Score=123.42  Aligned_cols=163  Identities=9%  Similarity=0.033  Sum_probs=116.5

Q ss_pred             CCcHH-HHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            2 GRRKT-VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~~~-~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      +|+++ +++++.    +.+.++.++.+|++|.++++++++       ++|+||||+|..                   |+
T Consensus        37 ~r~~~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vv~~ag~~-------------------n~   86 (221)
T 3r6d_A           37 GRQLKTRIPPEI----IDHERVTVIEGSFQNPGXLEQAVT-------NAEVVFVGAMES-------------------GS   86 (221)
T ss_dssp             ESSHHHHSCHHH----HTSTTEEEEECCTTCHHHHHHHHT-------TCSEEEESCCCC-------------------HH
T ss_pred             ecCccccchhhc----cCCCceEEEECCCCCHHHHHHHHc-------CCCEEEEcCCCC-------------------Ch
Confidence            46666 554433    345679999999999999888875       689999999953                   22


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccch----------hhHHHHHHHHHHHHHHHHHhcCCC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI----------HVSAAKAAVDSITRSLALEWGTDY  150 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~----------~Y~~sK~a~~~l~~~la~e~~~~~  150 (257)
                      .     ++.+++.|++.+        .++||++||..+..+.+...          .|+.+|.+++.+++        ..
T Consensus        87 ~-----~~~~~~~~~~~~--------~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~--------~~  145 (221)
T 3r6d_A           87 D-----MASIVKALSRXN--------IRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLR--------ES  145 (221)
T ss_dssp             H-----HHHHHHHHHHTT--------CCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHH--------HS
T ss_pred             h-----HHHHHHHHHhcC--------CCeEEEEeeceecCCCCcccccccccccccHHHHHHHHHHHHHH--------hC
Confidence            2     788888888765        68999999998877655444          89999999988775        24


Q ss_pred             CeEEEEEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhc--cCCCCcccCcEEEecCC
Q 025124          151 AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA--SDAGKYVNGNTLIVDGG  220 (257)
Q Consensus       151 gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~--~~~~~~~~G~~~~~dgg  220 (257)
                      |++++.|+||++.++.........     .......+.+.+++|+|+.+++++  ++++.++++.....+.+
T Consensus       146 ~i~~~~vrpg~v~~~~~~~~~~~~-----~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i~~~~  212 (221)
T 3r6d_A          146 NLNYTILRLTWLYNDPEXTDYELI-----PEGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGVGEPG  212 (221)
T ss_dssp             CSEEEEEEECEEECCTTCCCCEEE-----CTTSCCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEEECTT
T ss_pred             CCCEEEEechhhcCCCCCcceeec-----cCCccCCCceeeHHHHHHHHHHHHHhcChhhhhcceeeecCCC
Confidence            799999999999877332221100     001111223678999999999999  88777665544444443

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.68  E-value=1.3e-15  Score=125.57  Aligned_cols=142  Identities=10%  Similarity=0.030  Sum_probs=113.1

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|++|.++++++++       ++|+||||||..        +.+.|+..+++|+.+++++++++.+    .+ 
T Consensus        43 ~~~~~~~~Dl~d~~~~~~~~~-------~~D~vi~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~a~~~----~~-  102 (267)
T 3rft_A           43 PNEECVQCDLADANAVNAMVA-------GCDGIVHLGGIS--------VEKPFEQILQGNIIGLYNLYEAARA----HG-  102 (267)
T ss_dssp             TTEEEEECCTTCHHHHHHHHT-------TCSEEEECCSCC--------SCCCHHHHHHHHTHHHHHHHHHHHH----TT-
T ss_pred             CCCEEEEcCCCCHHHHHHHHc-------CCCEEEECCCCc--------CcCCHHHHHHHHHHHHHHHHHHHHH----cC-
Confidence            467889999999999988876       689999999973        3345788999999999999999843    23 


Q ss_pred             CCCCCCCCceEEEEcccccc------------cccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCC
Q 025124          100 GQASSSSGGIIINISATLHY------------TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG  167 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~------------~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~  167 (257)
                             .++||++||..++            .+..+...|+++|.+.+.+++.++.++    |++++.|+||.+.+++.
T Consensus       103 -------~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~~~----g~~~~~vr~~~v~~~~~  171 (267)
T 3rft_A          103 -------QPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFDKF----GQETALVRIGSCTPEPN  171 (267)
T ss_dssp             -------CCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECBCSSSCC
T ss_pred             -------CCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh----CCeEEEEEeecccCCCC
Confidence                   5799999998776            333456789999999999999999876    58899999999986643


Q ss_pred             CCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCC
Q 025124          168 VSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (257)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  206 (257)
                      ...    .          ...+.+++|+++.+..++..+
T Consensus       172 ~~~----~----------~~~~~~~~d~a~~~~~~~~~~  196 (267)
T 3rft_A          172 NYR----M----------LSTWFSHDDFVSLIEAVFRAP  196 (267)
T ss_dssp             STT----H----------HHHBCCHHHHHHHHHHHHHCS
T ss_pred             CCC----c----------eeeEEcHHHHHHHHHHHHhCC
Confidence            211    1          112568999999999888654

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.68  E-value=1.5e-15  Score=129.03  Aligned_cols=208  Identities=12%  Similarity=-0.022  Sum_probs=146.0

Q ss_pred             CCcHHHHHHHHHHHHhc-CCCeEEE-EccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSL-GIPAIGL-EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~-~~~~~~~-~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      +|+.++++.+.+.+... +.++.++ .+|++|.++++++++       ++|+|||+||.....       ++++..+++|
T Consensus        42 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vih~A~~~~~~-------~~~~~~~~~n  107 (342)
T 1y1p_A           42 ARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-------GAAGVAHIASVVSFS-------NKYDEVVTPA  107 (342)
T ss_dssp             ESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-------TCSEEEECCCCCSCC-------SCHHHHHHHH
T ss_pred             eCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc-------CCCEEEEeCCCCCCC-------CCHHHHHHHH
Confidence            57777777666665543 4578888 899999988776654       799999999965432       2456799999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccc-cc------------------------------ccchhh
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-AT------------------------------WYQIHV  128 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~-~~------------------------------~~~~~Y  128 (257)
                      +.++.++++++.+.   .+        .++||++||..++. +.                              .+...|
T Consensus       108 ~~g~~~ll~~~~~~---~~--------~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y  176 (342)
T 1y1p_A          108 IGGTLNALRAAAAT---PS--------VKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVY  176 (342)
T ss_dssp             HHHHHHHHHHHHTC---TT--------CCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHH
T ss_pred             HHHHHHHHHHHHhC---CC--------CcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhccccccccccchHHH
Confidence            99999999988642   22        47899999987652 11                              134679


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCC---hHHHHHHhhhh--------ccCCCCCCHHhHHH
Q 025124          129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---PEEIRSKATDY--------MAAYKFGEKWDIAM  197 (257)
Q Consensus       129 ~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~~~~--------~~~~~~~~~~dva~  197 (257)
                      +.+|.+.+.+++.++.++. . +++++.++||.+.+++......   ...+.......        .+...+.+++|+|+
T Consensus       177 ~~sK~~~e~~~~~~~~~~~-~-~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~  254 (342)
T 1y1p_A          177 AASKTEAELAAWKFMDENK-P-HFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAVDIGL  254 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHC-C-SSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEEEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcC-C-CceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccCCcCCEeEHHHHHH
Confidence            9999999999999999986 4 8999999999999886543211   11122111111        12345688999999


Q ss_pred             HHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHHHHHHhcc
Q 025124          198 AALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERK  244 (257)
Q Consensus       198 ~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~~~~~~  244 (257)
                      +++.++...  ..+|..+..+|+.      .-..++...+.+.+.++
T Consensus       255 a~~~~~~~~--~~~g~~~~~~g~~------~s~~e~~~~i~~~~~~~  293 (342)
T 1y1p_A          255 LHLGCLVLP--QIERRRVYGTAGT------FDWNTVLATFRKLYPSK  293 (342)
T ss_dssp             HHHHHHHCT--TCCSCEEEECCEE------ECHHHHHHHHHHHCTTS
T ss_pred             HHHHHHcCc--ccCCceEEEeCCC------CCHHHHHHHHHHHCCCc
Confidence            999998642  3567666555542      22466777777777654

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.66  E-value=1.8e-15  Score=128.61  Aligned_cols=217  Identities=17%  Similarity=0.104  Sum_probs=151.2

Q ss_pred             HHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCC-------------C----------
Q 025124            7 VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV-------------P----------   63 (257)
Q Consensus         7 ~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~-------------~----------   63 (257)
                      ....+.+.+++.|.+...+.||+++.++++++++++.+++|+||+||||++.....             +          
T Consensus        99 ~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~l  178 (401)
T 4ggo_A           99 NNLAFDEAAKREGLYSVTIDGDAFSDEIKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTV  178 (401)
T ss_dssp             HHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEE
T ss_pred             hHHHHHHHHHHcCCCceeEeCCCCCHHHHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccc
Confidence            45667788888899999999999999999999999999999999999999965310             1          


Q ss_pred             -----------CCCCCHHHHHHHHHHH---hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccccccc--chh
Q 025124           64 -----------AEDLSPNGFRTVIEID---SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY--QIH  127 (257)
Q Consensus        64 -----------~~~~~~~~~~~~~~~n---~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~--~~~  127 (257)
                                 +...+.++++.+++++   .++.+...+...+.|.+          +++++.+|+.++....|.  .+.
T Consensus       179 dt~~~~i~~~~l~pat~eeie~T~~vMg~s~~s~w~~al~~a~lla~----------G~siva~SYiGse~t~P~Y~~G~  248 (401)
T 4ggo_A          179 DPFTGELKEISAEPANDEEAAATVKVMGGEDWERWIKQLSKEGLLEE----------GCITLAYSYIGPEATQALYRKGT  248 (401)
T ss_dssp             CTTTCCEEEEEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEE----------EEEEEEEECCCCGGGHHHHTTSH
T ss_pred             cccccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHhhhcccC----------CceEEEEeccCcceeecCCCccH
Confidence                       1234566777666554   44555555555555544          688999999888665554  458


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCC
Q 025124          128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG  207 (257)
Q Consensus       128 Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  207 (257)
                      ++++|++|++.++.|+.+++   +++++++.+|.+.|.-...-..-........+.+  ...+..|.+.+.+.+|..+. 
T Consensus       249 mG~AKaaLEa~~r~La~eL~---~~~a~v~v~~a~vT~AssaIP~~ply~~~l~kvm--k~~g~heg~ieq~~rl~~~~-  322 (401)
T 4ggo_A          249 IGKAKEHLEATAHRLNKENP---SIRAFVSVNKGLVTRASAVIPVIPLYLASLFKVM--KEKGNHEGCIEQITRLYAER-  322 (401)
T ss_dssp             HHHHHHHHHHHHHHHHHHCT---TEEEEEEECCCCCCTTGGGSSSHHHHHHHHHHHH--HHHTCCCCHHHHHHHHHHHT-
T ss_pred             HHHHHHHHHHHHHHHHHhcC---CCcEEEEEcCccccchhhcCCCchHHHHHHHHHH--HhcCCCCchHHHHHHHHHHh-
Confidence            99999999999999999997   4899999999999874433222222222222222  12367788889999998642 


Q ss_pred             CcccCcEEEecCCcccCCC-CCCcHHHHHHHHH
Q 025124          208 KYVNGNTLIVDGGNWLSNP-RDLPKEAVNQLSR  239 (257)
Q Consensus       208 ~~~~G~~~~~dgg~~~~~~-~~~~~~~~~~~~~  239 (257)
                      -|-++....+|....++.. +.+.+....+..+
T Consensus       323 ly~~~~~~~~D~~~r~r~d~~el~~~vq~~v~~  355 (401)
T 4ggo_A          323 LYRKDGTIPVDEENRIRIDDWELEEDVQKAVSA  355 (401)
T ss_dssp             TSCTTCCCCCCTTSCEESCTTTTCHHHHHHHHH
T ss_pred             hccCCCCCCcCCCCCccCchhhcCHHHHHHHHH
Confidence            2333334557764444444 4445555555443

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.65  E-value=8.3e-15  Score=125.24  Aligned_cols=194  Identities=12%  Similarity=-0.020  Sum_probs=141.7

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|++|.++++.+++       ++|+|||+||.....    .+.++++..+++|+.++.++++++.+.    + 
T Consensus        81 ~~~~~~~~Dl~d~~~~~~~~~-------~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-  144 (352)
T 1sb8_A           81 SNFKFIQGDIRNLDDCNNACA-------GVDYVLHQAALGSVP----RSINDPITSNATNIDGFLNMLIAARDA----K-  144 (352)
T ss_dssp             TTEEEEECCTTSHHHHHHHHT-------TCSEEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHHT----T-
T ss_pred             CceEEEECCCCCHHHHHHHhc-------CCCEEEECCcccCch----hhhhCHHHHHHHHHHHHHHHHHHHHHc----C-
Confidence            578899999999988887765       799999999964321    134677889999999999999988652    2 


Q ss_pred             CCCCCCCCceEEEEcccccccccc-----------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCC
Q 025124          100 GQASSSSGGIIINISATLHYTATW-----------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  168 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~~~~-----------~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~  168 (257)
                             .++||++||...+.+..           +...|+.+|.+.+.+++.++.++    |++++.++||.+.++...
T Consensus       145 -------~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----g~~~~ilRp~~v~G~~~~  213 (352)
T 1sb8_A          145 -------VQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY----GFSTIGLRYFNVFGRRQD  213 (352)
T ss_dssp             -------CSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCCEEEEECCEECTTCC
T ss_pred             -------CCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc----CCCEEEEEECceeCcCCC
Confidence                   47899999987654432           35689999999999999998875    599999999999988643


Q ss_pred             CCC----ChHHHHHHhhhhcc---------CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHH
Q 025124          169 SKL----APEEIRSKATDYMA---------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVN  235 (257)
Q Consensus       169 ~~~----~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~  235 (257)
                      ...    ....+........+         ...+.+++|+|++++.++... ....|+.+++.+|..+.     ..++..
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~s-----~~e~~~  287 (352)
T 1sb8_A          214 PNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAG-LDARNQVYNIAVGGRTS-----LNQLFF  287 (352)
T ss_dssp             CCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCC-GGGCSEEEEESCSCCEE-----HHHHHH
T ss_pred             CCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcc-ccCCCceEEeCCCCCcc-----HHHHHH
Confidence            221    01122222222211         124678999999999988642 23568899998876544     567788


Q ss_pred             HHHHHH---hccCC
Q 025124          236 QLSRAV---ERKSR  246 (257)
Q Consensus       236 ~~~~~~---~~~~~  246 (257)
                      .+.+..   +.+..
T Consensus       288 ~i~~~~~~~g~~~~  301 (352)
T 1sb8_A          288 ALRDGLAENGVSYH  301 (352)
T ss_dssp             HHHHHHHHTTCCCC
T ss_pred             HHHHHHHhcCCCCC
Confidence            888877   55443

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.64  E-value=7e-15  Score=125.36  Aligned_cols=190  Identities=16%  Similarity=0.091  Sum_probs=138.4

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|++|.++++.+++       .+|+|||+||....    +.+.++++..+++|+.++.++++++.+.      
T Consensus        54 ~~~~~~~~Dl~d~~~~~~~~~-------~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~------  116 (348)
T 1oc2_A           54 DRVELVVGDIADAELVDKLAA-------KADAIVHYAAESHN----DNSLNDPSPFIHTNFIGTYTLLEAARKY------  116 (348)
T ss_dssp             SSEEEEECCTTCHHHHHHHHT-------TCSEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHH------
T ss_pred             CCeEEEECCCCCHHHHHHHhh-------cCCEEEECCcccCc----cchhhCHHHHHHHHHHHHHHHHHHHHHh------
Confidence            467889999999988887765       46999999996432    1234566789999999999999999775      


Q ss_pred             CCCCCCCCceEEEEccccccc-----------------------ccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEE
Q 025124          100 GQASSSSGGIIINISATLHYT-----------------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~-----------------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~  156 (257)
                             +++||++||...+.                       +..+...|+.+|.+.+.+++.++.++    |++++.
T Consensus       117 -------~~~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----gi~~~i  185 (348)
T 1oc2_A          117 -------DIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF----GVKATI  185 (348)
T ss_dssp             -------TCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEE
T ss_pred             -------CCeEEEecccceeCCCcccccccccccccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh----CCCEEE
Confidence                   23799999976432                       12345689999999999999998875    599999


Q ss_pred             EecCcccCCCCCCCCChHHHHHHhhhhc---------cCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCC
Q 025124          157 IAPGPIKDTAGVSKLAPEEIRSKATDYM---------AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPR  227 (257)
Q Consensus       157 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~  227 (257)
                      ++|+.+.++...................         ....+.+++|+|+++++++...   .+|+.+++++|..+.   
T Consensus       186 lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~---~~g~~~~i~~~~~~s---  259 (348)
T 1oc2_A          186 SNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKG---RMGETYLIGADGEKN---  259 (348)
T ss_dssp             EEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHHC---CTTCEEEECCSCEEE---
T ss_pred             EeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHHHhhCC---CCCCeEEeCCCCCCC---
Confidence            9999999886532111112222222211         1234678999999999999643   368999999886554   


Q ss_pred             CCcHHHHHHHHHHHhccC
Q 025124          228 DLPKEAVNQLSRAVERKS  245 (257)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~  245 (257)
                        ..++...+.+....+.
T Consensus       260 --~~e~~~~i~~~~g~~~  275 (348)
T 1oc2_A          260 --NKEVLELILEKMGQPK  275 (348)
T ss_dssp             --HHHHHHHHHHHTTCCT
T ss_pred             --HHHHHHHHHHHhCCCc
Confidence              5667777777776553

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.63  E-value=9e-16  Score=157.94  Aligned_cols=141  Identities=13%  Similarity=0.065  Sum_probs=107.7

Q ss_pred             HHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHH
Q 025124            7 VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM   86 (257)
Q Consensus         7 ~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l   86 (257)
                      ..++..+++.+.|.++.++.||++|.++++++++++. ++|+||+||||||+....++.+++.++|++++++|+.|++++
T Consensus      1924 ~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~-~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l 2002 (2512)
T 2vz8_A         1924 YQARQVREWRRQGVQVLVSTSNASSLDGARSLITEAT-QLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANL 2002 (2512)
T ss_dssp             HHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHH-HHSCEEEEEECCCC----------------CTTTTHHHHHHH
T ss_pred             HHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHH-hcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHH
Confidence            3455667777778889999999999999999999987 489999999999988888899999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccc
Q 025124           87 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK  163 (257)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~  163 (257)
                      .+++.+.|.+          .|+||++||.++..+.++++.|+++|+++++|++.++.+     |+...++..|.+.
T Consensus      2003 ~~~~~~~~~~----------~g~iV~iSS~ag~~g~~g~~~Y~aaKaal~~l~~~rr~~-----Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A         2003 DRVTREACPE----------LDYFVIFSSVSCGRGNAGQANYGFANSAMERICEKRRHD-----GLPGLAVQWGAIG 2064 (2512)
T ss_dssp             HHHHHHHCTT----------CCEEEEECCHHHHTTCTTCHHHHHHHHHHHHHHHHHHHT-----TSCCCEEEECCBC
T ss_pred             HHHHHHhccc----------CCEEEEecchhhcCCCCCcHHHHHHHHHHHHHHHHHHHC-----CCcEEEEEccCcC
Confidence            9999998765          478999999999999999999999999999999987754     4555556555543

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.62  E-value=5.3e-14  Score=119.83  Aligned_cols=194  Identities=15%  Similarity=0.087  Sum_probs=138.7

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|++|.+++..+++..     ++|+|||+||.....    ...++++..+++|+.++..+++++.+.    + 
T Consensus        75 ~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-  140 (346)
T 4egb_A           75 PNYYFVKGEIQNGELLEHVIKER-----DVQVIVNFAAESHVD----RSIENPIPFYDTNVIGTVTLLELVKKY----P-  140 (346)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHH-----TCCEEEECCCCC-------------CHHHHHHTHHHHHHHHHHHHS----T-
T ss_pred             CCeEEEEcCCCCHHHHHHHHhhc-----CCCEEEECCcccchh----hhhhCHHHHHHHHHHHHHHHHHHHHhc----C-
Confidence            46888999999999999998763     699999999965432    244566789999999999999887543    3 


Q ss_pred             CCCCCCCCceEEEEcccccccccc------------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCC
Q 025124          100 GQASSSSGGIIINISATLHYTATW------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG  167 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~~~~------------~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~  167 (257)
                             .++||++||...+...+            +...|+.+|.+.+.+++.++.+.    |++++.++|+.+..+..
T Consensus       141 -------~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----g~~~~ilRp~~v~G~~~  209 (346)
T 4egb_A          141 -------HIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADMIALAYYKTY----QLPVIVTRCSNNYGPYQ  209 (346)
T ss_dssp             -------TSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECEEESTTC
T ss_pred             -------CCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh----CCCEEEEeecceeCcCC
Confidence                   46799999976544321            24679999999999999998764    58999999999998754


Q ss_pred             CCCCChHHHHHHhhhhccC---------CCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHHH
Q 025124          168 VSKLAPEEIRSKATDYMAA---------YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLS  238 (257)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~  238 (257)
                      ........+........+.         ..+..++|+|++++.++....   .|+.+++.+|..+.     ..++...+.
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~---~g~~~~i~~~~~~s-----~~e~~~~i~  281 (346)
T 4egb_A          210 YPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGR---VGEVYNIGGNNEKT-----NVEVVEQII  281 (346)
T ss_dssp             CTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCC---TTCEEEECCSCCEE-----HHHHHHHHH
T ss_pred             CccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCC---CCCEEEECCCCcee-----HHHHHHHHH
Confidence            3322222232322222211         124568999999999997643   68899999886554     577788888


Q ss_pred             HHHhccCC
Q 025124          239 RAVERKSR  246 (257)
Q Consensus       239 ~~~~~~~~  246 (257)
                      +....+..
T Consensus       282 ~~~g~~~~  289 (346)
T 4egb_A          282 TLLGKTKK  289 (346)
T ss_dssp             HHHTCCGG
T ss_pred             HHhCCCcc
Confidence            88776543

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.62  E-value=8e-15  Score=124.51  Aligned_cols=190  Identities=17%  Similarity=0.123  Sum_probs=137.8

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|++|.+++++++       .++|+|||+||....    +.+.++++..+++|+.++.++++++.+.    + 
T Consensus        55 ~~~~~~~~Dl~d~~~~~~~~-------~~~d~Vih~A~~~~~----~~~~~~~~~~~~~Nv~~~~~l~~a~~~~----~-  118 (337)
T 1r6d_A           55 PRLRFVHGDIRDAGLLAREL-------RGVDAIVHFAAESHV----DRSIAGASVFTETNVQGTQTLLQCAVDA----G-  118 (337)
T ss_dssp             TTEEEEECCTTCHHHHHHHT-------TTCCEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHT----T-
T ss_pred             CCeEEEEcCCCCHHHHHHHh-------cCCCEEEECCCccCc----hhhhhCHHHHHHHHHHHHHHHHHHHHHc----C-
Confidence            46888999999998887766       479999999996432    1234566789999999999999998764    2 


Q ss_pred             CCCCCCCCceEEEEccccccc-----------ccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCC
Q 025124          100 GQASSSSGGIIINISATLHYT-----------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  168 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~-----------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~  168 (257)
                             .++||++||...+.           +..+...|+.+|.+.+.+++.++.++    |++++.++|+.+.++...
T Consensus       119 -------~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----g~~~~ilrp~~v~G~~~~  187 (337)
T 1r6d_A          119 -------VGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTY----GLDVRITRCCNNYGPYQH  187 (337)
T ss_dssp             -------CCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECEEECTTCC
T ss_pred             -------CCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHH----CCCEEEEEeeeeECCCCC
Confidence                   46899999976542           22345789999999999999998875    589999999999988643


Q ss_pred             CCCChHHHHHHhhhhcc---------CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHHHH
Q 025124          169 SKLAPEEIRSKATDYMA---------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSR  239 (257)
Q Consensus       169 ~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~  239 (257)
                      .......+........+         ...+.+++|++++++.++...   .+|+.+++.+|..+.     ..++...|.+
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~---~~g~~~~v~~~~~~s-----~~e~~~~i~~  259 (337)
T 1r6d_A          188 PEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGG---RAGEIYHIGGGLELT-----NRELTGILLD  259 (337)
T ss_dssp             TTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCCEEE-----HHHHHHHHHH
T ss_pred             CCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCC---CCCCEEEeCCCCCcc-----HHHHHHHHHH
Confidence            21111122222222111         123567999999999999643   368899999886554     5667777777


Q ss_pred             HHhcc
Q 025124          240 AVERK  244 (257)
Q Consensus       240 ~~~~~  244 (257)
                      ...++
T Consensus       260 ~~g~~  264 (337)
T 1r6d_A          260 SLGAD  264 (337)
T ss_dssp             HHTCC
T ss_pred             HhCCC
Confidence            77654

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.62  E-value=6.9e-15  Score=125.61  Aligned_cols=184  Identities=15%  Similarity=0.057  Sum_probs=135.4

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|++.+++.+.+.+.  ..++.++.+|++|.+++.++++       ++|+|||+||.....    .........+++|+.
T Consensus        54 ~r~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~-------~~D~Vih~Aa~~~~~----~~~~~~~~~~~~Nv~  120 (344)
T 2gn4_A           54 SRDELKQSEMAMEFN--DPRMRFFIGDVRDLERLNYALE-------GVDICIHAAALKHVP----IAEYNPLECIKTNIM  120 (344)
T ss_dssp             ESCHHHHHHHHHHHC--CTTEEEEECCTTCHHHHHHHTT-------TCSEEEECCCCCCHH----HHHHSHHHHHHHHHH
T ss_pred             ECChhhHHHHHHHhc--CCCEEEEECCCCCHHHHHHHHh-------cCCEEEECCCCCCCC----chhcCHHHHHHHHHH
Confidence            577777777766654  3578999999999998887764       699999999965321    122345679999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      ++.++++++.+.    +        -++||++||..+..|   ...|+++|++++.++++++.++. +.|+++++++||.
T Consensus       121 gt~~l~~aa~~~----~--------v~~~V~~SS~~~~~p---~~~Y~~sK~~~E~~~~~~~~~~~-~~g~~~~~vRpg~  184 (344)
T 2gn4_A          121 GASNVINACLKN----A--------ISQVIALSTDKAANP---INLYGATKLCSDKLFVSANNFKG-SSQTQFSVVRYGN  184 (344)
T ss_dssp             HHHHHHHHHHHT----T--------CSEEEEECCGGGSSC---CSHHHHHHHHHHHHHHHGGGCCC-SSCCEEEEECCCE
T ss_pred             HHHHHHHHHHhC----C--------CCEEEEecCCccCCC---ccHHHHHHHHHHHHHHHHHHHhC-CCCcEEEEEEecc
Confidence            999999999764    2        468999999776544   46899999999999999999887 7899999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhc---c------CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCC
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYM---A------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG  220 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~---~------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg  220 (257)
                      +.++...  . ...+........   +      ...+.+++|+++++++++...   ..|+.+..+++
T Consensus       185 v~g~~~~--~-i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~~~---~~g~~~~~~~~  246 (344)
T 2gn4_A          185 VVGSRGS--V-VPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRM---HGGEIFVPKIP  246 (344)
T ss_dssp             ETTCTTS--H-HHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHHHC---CSSCEEEECCC
T ss_pred             EECCCCC--H-HHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHhhc---cCCCEEecCCC
Confidence            9986421  1 112222221111   1      123578999999999999753   25777777654

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.61  E-value=1.6e-14  Score=121.38  Aligned_cols=190  Identities=12%  Similarity=0.058  Sum_probs=135.9

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      ++.++.+|++|.+++++++++.     ++|++||+|+....    ..+.++++..+++|+.+++++++++.+    .+  
T Consensus        44 ~~~~~~~Dl~~~~~~~~~~~~~-----~~d~vi~~a~~~~~----~~~~~~~~~~~~~N~~g~~~l~~a~~~----~~--  108 (311)
T 2p5y_A           44 GVPFFRVDLRDKEGVERAFREF-----RPTHVSHQAAQASV----KVSVEDPVLDFEVNLLGGLNLLEACRQ----YG--  108 (311)
T ss_dssp             TCCEECCCTTCHHHHHHHHHHH-----CCSEEEECCSCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHH----TT--
T ss_pred             CeEEEECCCCCHHHHHHHHHhc-----CCCEEEECccccCc----hhhhhCHHHHHHHHHHHHHHHHHHHHH----hC--
Confidence            3567889999999998887642     79999999996432    124566788999999999999998753    22  


Q ss_pred             CCCCCCCceEEEEccccccccc-------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCC
Q 025124          101 QASSSSGGIIINISATLHYTAT-------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG  167 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~~~-------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~  167 (257)
                            .++||++||.++.++.             .+...|+.+|.+++.+++.++.++    |++++.++|+.+.+|..
T Consensus       109 ------~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~lrp~~v~Gp~~  178 (311)
T 2p5y_A          109 ------VEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQSY----GLKWVSLRYGNVYGPRQ  178 (311)
T ss_dssp             ------CSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECEEECTTC
T ss_pred             ------CCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHc----CCCEEEEeeccccCcCC
Confidence                  4689999998332221             235689999999999999998775    59999999999998864


Q ss_pred             CCCCCh---HHHHHHhhhhc--------------cCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCc
Q 025124          168 VSKLAP---EEIRSKATDYM--------------AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLP  230 (257)
Q Consensus       168 ~~~~~~---~~~~~~~~~~~--------------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~  230 (257)
                      ......   ..+........              ....+.+++|+++++++++...     |+.+++.+|..+.     .
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~-----~~~~~i~~~~~~s-----~  248 (311)
T 2p5y_A          179 DPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFSL-----EGIYNVGTGEGHT-----T  248 (311)
T ss_dssp             CSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHHHC-----CEEEEESCSCCEE-----H
T ss_pred             CCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHhCC-----CCEEEeCCCCCcc-----H
Confidence            332111   11112111111              1124567999999999998652     7899998876544     4


Q ss_pred             HHHHHHHHHHHhccC
Q 025124          231 KEAVNQLSRAVERKS  245 (257)
Q Consensus       231 ~~~~~~~~~~~~~~~  245 (257)
                      .++...+.+....+.
T Consensus       249 ~e~~~~i~~~~g~~~  263 (311)
T 2p5y_A          249 REVLMAVAEAAGKAP  263 (311)
T ss_dssp             HHHHHHHHHHHTCCC
T ss_pred             HHHHHHHHHHhCCCC
Confidence            677788887776654

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.60  E-value=2.6e-15  Score=122.12  Aligned_cols=171  Identities=12%  Similarity=0.013  Sum_probs=117.8

Q ss_pred             CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCC---------CCCCCHHHHHHHHHHHhHHHHHHHHH
Q 025124           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP---------AEDLSPNGFRTVIEIDSVGTFIMCHE   89 (257)
Q Consensus        19 ~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~---------~~~~~~~~~~~~~~~n~~~~~~l~~~   89 (257)
                      +.++.++.+|++|.++++++++       ++|+||||||......         ..+...++++..+++|+.++..++++
T Consensus        47 ~~~~~~~~~D~~d~~~~~~~~~-------~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~  119 (253)
T 1xq6_A           47 GGEADVFIGDITDADSINPAFQ-------GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDA  119 (253)
T ss_dssp             TCCTTEEECCTTSHHHHHHHHT-------TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHH
T ss_pred             CCCeeEEEecCCCHHHHHHHHc-------CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHH
Confidence            3467789999999998888775       5899999999654211         12223344556889999999988887


Q ss_pred             HHHHHHhcCCCCCCCCCCceEEEEcccccccccccch-----hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccC
Q 025124           90 ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI-----HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD  164 (257)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~-----~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t  164 (257)
                      +.+.    +        .++||++||..+..+.....     .|+.+|.+++.+++        ..|++++.++||.+.+
T Consensus       120 ~~~~----~--------~~~iv~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~--------~~~i~~~~vrpg~v~~  179 (253)
T 1xq6_A          120 AKVA----G--------VKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLA--------DSGTPYTIIRAGGLLD  179 (253)
T ss_dssp             HHHH----T--------CSEEEEEEETTTTCTTCGGGGGGGCCHHHHHHHHHHHHH--------TSSSCEEEEEECEEEC
T ss_pred             HHHc----C--------CCEEEEEcCccCCCCCCccccccchhHHHHHHHHHHHHH--------hCCCceEEEecceeec
Confidence            7543    2        47899999987765433332     36679999988775        3579999999999998


Q ss_pred             CCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCC
Q 025124          165 TAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG  220 (257)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg  220 (257)
                      +.................  ....+.+++|+|+++++++....  ..|+.++++++
T Consensus       180 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dva~~~~~~~~~~~--~~g~~~~i~~~  231 (253)
T 1xq6_A          180 KEGGVRELLVGKDDELLQ--TDTKTVPRADVAEVCIQALLFEE--AKNKAFDLGSK  231 (253)
T ss_dssp             SCSSSSCEEEESTTGGGG--SSCCEEEHHHHHHHHHHHTTCGG--GTTEEEEEEEC
T ss_pred             CCcchhhhhccCCcCCcC--CCCcEEcHHHHHHHHHHHHcCcc--ccCCEEEecCC
Confidence            753211100000000111  12346789999999999997543  46889999876

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.60  E-value=2.9e-14  Score=119.84  Aligned_cols=188  Identities=12%  Similarity=0.047  Sum_probs=135.7

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      .+.++.+|+++ +++.++++       ++|++||+|+...    ...+.++++..+++|+.+++++++++..    .+  
T Consensus        44 ~~~~~~~Dl~~-~~~~~~~~-------~~d~vih~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~--  105 (313)
T 3ehe_A           44 AARLVKADLAA-DDIKDYLK-------GAEEVWHIAANPD----VRIGAENPDEIYRNNVLATYRLLEAMRK----AG--  105 (313)
T ss_dssp             TEEEECCCTTT-SCCHHHHT-------TCSEEEECCCCCC----CC-CCCCHHHHHHHHHHHHHHHHHHHHH----HT--
T ss_pred             CcEEEECcCCh-HHHHHHhc-------CCCEEEECCCCCC----hhhhhhCHHHHHHHHHHHHHHHHHHHHH----cC--
Confidence            46778899998 77776664       7999999999532    2345567788999999999999888543    33  


Q ss_pred             CCCCCCCceEEEEccccccc-----------ccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCC
Q 025124          101 QASSSSGGIIINISATLHYT-----------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS  169 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~-----------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~  169 (257)
                            .++||++||...+.           +..+...|+.+|.+.+.+++.++.++    |++++.++|+.+..+....
T Consensus       106 ------~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----g~~~~ilRp~~v~G~~~~~  175 (313)
T 3ehe_A          106 ------VSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTF----DMQAWIYRFANVIGRRSTH  175 (313)
T ss_dssp             ------CCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHT----TCEEEEEECSCEESTTCCC
T ss_pred             ------CCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc----CCCEEEEeeccccCcCCCc
Confidence                  46899999987652           33346789999999999999999875    6999999999999875432


Q ss_pred             CCChHHHHHHhhhh-c---------cCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHHHH
Q 025124          170 KLAPEEIRSKATDY-M---------AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSR  239 (257)
Q Consensus       170 ~~~~~~~~~~~~~~-~---------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~  239 (257)
                      ... ..+....... .         ....+.+++|+|+++++++.+   ...|+.+++.+|..+.     ..++.+.+.+
T Consensus       176 ~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~---~~~~~~~ni~~~~~~s-----~~e~~~~i~~  246 (313)
T 3ehe_A          176 GVI-YDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRG---DERVNIFNIGSEDQIK-----VKRIAEIVCE  246 (313)
T ss_dssp             SHH-HHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTC---CSSEEEEECCCSCCEE-----HHHHHHHHHH
T ss_pred             ChH-HHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhcc---CCCCceEEECCCCCee-----HHHHHHHHHH
Confidence            211 1122211111 1         112467899999999999973   2457899998876544     5677778887


Q ss_pred             HHhccC
Q 025124          240 AVERKS  245 (257)
Q Consensus       240 ~~~~~~  245 (257)
                      ..+.+.
T Consensus       247 ~~g~~~  252 (313)
T 3ehe_A          247 ELGLSP  252 (313)
T ss_dssp             HTTCCC
T ss_pred             HhCCCC
Confidence            776553

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.60  E-value=2e-14  Score=123.03  Aligned_cols=202  Identities=14%  Similarity=0.086  Sum_probs=140.4

Q ss_pred             CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Q 025124           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (257)
Q Consensus        19 ~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (257)
                      +.++.++.+|++|.+++..+++.+     ++|+|||+||...    .+.+.++++..+++|+.++.++++++.+.   ..
T Consensus        56 ~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~  123 (357)
T 1rkx_A           56 ADGMQSEIGDIRDQNKLLESIREF-----QPEIVFHMAAQPL----VRLSYSEPVETYSTNVMGTVYLLEAIRHV---GG  123 (357)
T ss_dssp             TTTSEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCC----HHHHHHCHHHHHHHHTHHHHHHHHHHHHH---CC
T ss_pred             CCceEEEEccccCHHHHHHHHHhc-----CCCEEEECCCCcc----cccchhCHHHHHHHHHHHHHHHHHHHHHh---CC
Confidence            346788999999999999888765     7999999999532    12245677889999999999999998763   11


Q ss_pred             CCCCCCCCCceEEEEccccccc------------ccccchhhHHHHHHHHHHHHHHHHHhcC-----CCCeEEEEEecCc
Q 025124           99 RGQASSSSGGIIINISATLHYT------------ATWYQIHVSAAKAAVDSITRSLALEWGT-----DYAIRVNGIAPGP  161 (257)
Q Consensus        99 ~~~~~~~~~g~ii~iss~~~~~------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~-----~~gi~v~~v~Pg~  161 (257)
                              .++||++||...+.            +..+...|+.+|.+.+.+++.++.++..     +.|++++.++||.
T Consensus       124 --------~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~  195 (357)
T 1rkx_A          124 --------VKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGN  195 (357)
T ss_dssp             --------CCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCC
T ss_pred             --------CCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeece
Confidence                    46899999986432            2234568999999999999999988720     2389999999999


Q ss_pred             ccCCCCCCCCC-hHHHHHHhhhhcc--------CCCCCCHHhHHHHHHHhccCC--CCcccCcEEEecCC--cccCCCCC
Q 025124          162 IKDTAGVSKLA-PEEIRSKATDYMA--------AYKFGEKWDIAMAALYLASDA--GKYVNGNTLIVDGG--NWLSNPRD  228 (257)
Q Consensus       162 v~t~~~~~~~~-~~~~~~~~~~~~~--------~~~~~~~~dva~~~~~l~~~~--~~~~~G~~~~~dgg--~~~~~~~~  228 (257)
                      +.+|....... -..+........+        ...+.+.+|++++++.++...  .....|..+++.+|  ..+.    
T Consensus       196 v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s----  271 (357)
T 1rkx_A          196 VIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATP----  271 (357)
T ss_dssp             EECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEE----
T ss_pred             eeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeeccEeHHHHHHHHHHHHHhhhhcCCCCCceEEECCCCCCccc----
Confidence            99875422111 1122222211111        123678899999999888531  11234678888764  2232    


Q ss_pred             CcHHHHHHHHHHHhccC
Q 025124          229 LPKEAVNQLSRAVERKS  245 (257)
Q Consensus       229 ~~~~~~~~~~~~~~~~~  245 (257)
                       ..++...|.+....+.
T Consensus       272 -~~e~~~~i~~~~g~~~  287 (357)
T 1rkx_A          272 -VKNIVEQMVKYWGEGA  287 (357)
T ss_dssp             -HHHHHHHHHHHHCTTC
T ss_pred             -HHHHHHHHHHHhCCCC
Confidence             4667777777776543

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.59  E-value=2.2e-15  Score=120.35  Aligned_cols=153  Identities=14%  Similarity=0.126  Sum_probs=118.0

Q ss_pred             CCeEEEEccCCC-HHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Q 025124           20 IPAIGLEGDVRK-REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (257)
Q Consensus        20 ~~~~~~~~Dls~-~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (257)
                      .++.++.+|++| .++++++++       ++|+|||++|....            ..+++|+.++..+++++.    +.+
T Consensus        41 ~~~~~~~~D~~d~~~~~~~~~~-------~~d~vi~~ag~~~~------------~~~~~n~~~~~~l~~a~~----~~~   97 (219)
T 3dqp_A           41 NNVKAVHFDVDWTPEEMAKQLH-------GMDAIINVSGSGGK------------SLLKVDLYGAVKLMQAAE----KAE   97 (219)
T ss_dssp             TTEEEEECCTTSCHHHHHTTTT-------TCSEEEECCCCTTS------------SCCCCCCHHHHHHHHHHH----HTT
T ss_pred             CCceEEEecccCCHHHHHHHHc-------CCCEEEECCcCCCC------------CcEeEeHHHHHHHHHHHH----HhC
Confidence            357889999999 888777664       69999999997542            167788999888888773    333


Q ss_pred             CCCCCCCCCceEEEEccccccccccc-------chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCC
Q 025124           99 RGQASSSSGGIIINISATLHYTATWY-------QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL  171 (257)
Q Consensus        99 ~~~~~~~~~g~ii~iss~~~~~~~~~-------~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~  171 (257)
                              .++||++||..+..+.+.       ...|+.+|.+.+.+++      . ..|++++.++||++.++......
T Consensus        98 --------~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK~~~e~~~~------~-~~~i~~~ilrp~~v~g~~~~~~~  162 (219)
T 3dqp_A           98 --------VKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLYLT------K-ETNLDYTIIQPGALTEEEATGLI  162 (219)
T ss_dssp             --------CCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHHHHHHHHHH------H-SCCCEEEEEEECSEECSCCCSEE
T ss_pred             --------CCEEEEECcccccCCCcccccccccccHHHHHHHHHHHHHH------h-ccCCcEEEEeCceEecCCCCCcc
Confidence                    468999999888776655       7799999999999887      3 56899999999999987432221


Q ss_pred             ChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          172 APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                      .         .......+.+++|+|+++++++..+.  ..|+.+++++|.
T Consensus       163 ~---------~~~~~~~~i~~~Dva~~i~~~l~~~~--~~g~~~~i~~g~  201 (219)
T 3dqp_A          163 D---------INDEVSASNTIGDVADTIKELVMTDH--SIGKVISMHNGK  201 (219)
T ss_dssp             E---------ESSSCCCCEEHHHHHHHHHHHHTCGG--GTTEEEEEEECS
T ss_pred             c---------cCCCcCCcccHHHHHHHHHHHHhCcc--ccCcEEEeCCCC
Confidence            1         01234567899999999999997643  458999997763

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.59  E-value=5.6e-14  Score=119.14  Aligned_cols=181  Identities=18%  Similarity=0.066  Sum_probs=127.0

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      ++.++.+|++|.++++.+++++     ++|+|||+||.....     +.++++  +++|+.+++++++++...    +  
T Consensus        66 ~v~~~~~Dl~d~~~~~~~~~~~-----~~D~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~~----~--  127 (330)
T 2pzm_A           66 GLSVIEGSVTDAGLLERAFDSF-----KPTHVVHSAAAYKDP-----DDWAED--AATNVQGSINVAKAASKA----G--  127 (330)
T ss_dssp             TEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHHHH----T--
T ss_pred             CceEEEeeCCCHHHHHHHHhhc-----CCCEEEECCccCCCc-----cccChh--HHHHHHHHHHHHHHHHHc----C--
Confidence            5778899999999999888765     799999999965432     445566  999999999999998742    2  


Q ss_pred             CCCCCCCceEEEEccccccccc-----c------cchhhHHHHHHHHHHHHHHHHHhcCCCCeE-EEEEecCcccCCCCC
Q 025124          101 QASSSSGGIIINISATLHYTAT-----W------YQIHVSAAKAAVDSITRSLALEWGTDYAIR-VNGIAPGPIKDTAGV  168 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~~~-----~------~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~-v~~v~Pg~v~t~~~~  168 (257)
                            .++||++||...+.+.     +      +...|+.+|.+++.+++.+  ++. ...|| ++.+.||. .+.+  
T Consensus       128 ------~~~iV~~SS~~~~~~~~~~~~~~~E~~~~~~~Y~~sK~~~e~~~~~~--~~~-~~~iR~~~v~gp~~-~~~~--  195 (330)
T 2pzm_A          128 ------VKRLLNFQTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLMMS--DVP-VVSLRLANVTGPRL-AIGP--  195 (330)
T ss_dssp             ------CSEEEEEEEGGGGCSCSSSSBCTTCCCCCCSHHHHHHHHHHHHHHTC--SSC-EEEEEECEEECTTC-CSSH--
T ss_pred             ------CCEEEEecCHHHhCCCccCCCCcCCCCCCCChHHHHHHHHHHHHHHc--CCC-EEEEeeeeeECcCC-CCCH--
Confidence                  4789999998765433     2      5678999999999999876  333 33444 34444543 1111  


Q ss_pred             CCCChHHHHHHhhhh-cc-----CCCCCCHHhHHH-HHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHHHHHH
Q 025124          169 SKLAPEEIRSKATDY-MA-----AYKFGEKWDIAM-AALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAV  241 (257)
Q Consensus       169 ~~~~~~~~~~~~~~~-~~-----~~~~~~~~dva~-~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~~~  241 (257)
                          ...+....... ..     ...+.+++|+|+ ++++++....    |+.+++++|..+.     ..++...+.+..
T Consensus       196 ----~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~a~~~~~~~~~----g~~~~v~~~~~~s-----~~e~~~~i~~~~  262 (330)
T 2pzm_A          196 ----IPTFYKRLKAGQKCFCSDTVRDFLDMSDFLAIADLSLQEGRP----TGVFNVSTGEGHS-----IKEVFDVVLDYV  262 (330)
T ss_dssp             ----HHHHHHHHHTTCCCCEESCEECEEEHHHHHHHHHHHTSTTCC----CEEEEESCSCCEE-----HHHHHHHHHHHH
T ss_pred             ----HHHHHHHHHcCCEEeCCCCEecceeHHHHHHHHHHHHhhcCC----CCEEEeCCCCCCC-----HHHHHHHHHHHh
Confidence                11111111111 00     245678999999 9999997632    8899999886554     567788888887


Q ss_pred             hcc
Q 025124          242 ERK  244 (257)
Q Consensus       242 ~~~  244 (257)
                      ..+
T Consensus       263 g~~  265 (330)
T 2pzm_A          263 GAT  265 (330)
T ss_dssp             TCC
T ss_pred             CCC
Confidence            766

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.59  E-value=3.8e-14  Score=120.42  Aligned_cols=184  Identities=11%  Similarity=0.050  Sum_probs=129.0

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      ++.++.+|++|.+++.++++       ++|+|||+||...      ...++++..+++|+.++.++++++.+.    +  
T Consensus        57 ~~~~~~~Dl~d~~~~~~~~~-------~~d~vih~a~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~--  117 (342)
T 2x4g_A           57 EPECRVAEMLDHAGLERALR-------GLDGVIFSAGYYP------SRPRRWQEEVASALGQTNPFYAACLQA----R--  117 (342)
T ss_dssp             CCEEEECCTTCHHHHHHHTT-------TCSEEEEC------------------CHHHHHHHHHHHHHHHHHHH----T--
T ss_pred             CeEEEEecCCCHHHHHHHHc-------CCCEEEECCccCc------CCCCCHHHHHHHHHHHHHHHHHHHHHc----C--
Confidence            56788999999988877764       6999999999543      234567788999999999999998764    2  


Q ss_pred             CCCCCCCceEEEEccccccccccc----------------chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccC
Q 025124          101 QASSSSGGIIINISATLHYTATWY----------------QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD  164 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~~~~~----------------~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t  164 (257)
                            -++||++||...+.+...                ...|+.+|.+.+.+++.++.    . |++++.++||.+.+
T Consensus       118 ------~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~----~-g~~~~ilrp~~v~g  186 (342)
T 2x4g_A          118 ------VPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQAR----N-GLPVVIGIPGMVLG  186 (342)
T ss_dssp             ------CSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTSCHHHHHHHHHHHHHHHHHH----T-TCCEEEEEECEEEC
T ss_pred             ------CCeEEEECCHHhhCcCCCCCCCCCCCCCCccccccChHHHHHHHHHHHHHHHhh----c-CCcEEEEeCCceEC
Confidence                  467999999877654433                67899999999999999875    3 79999999999998


Q ss_pred             CCC-CCCCChHHHHHHhhhhcc------CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHH
Q 025124          165 TAG-VSKLAPEEIRSKATDYMA------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQL  237 (257)
Q Consensus       165 ~~~-~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~  237 (257)
                      +.. ... . ...........+      ...+.+++|+|+++++++....   .|+.+++.+|. +.     ..++...+
T Consensus       187 ~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~g~~~~v~~~~-~s-----~~e~~~~i  255 (342)
T 2x4g_A          187 ELDIGPT-T-GRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERGR---IGERYLLTGHN-LE-----MADLTRRI  255 (342)
T ss_dssp             SCCSSCS-T-THHHHHHHTTCCCEEECCEEEEEEHHHHHHHHHHHHHHSC---TTCEEEECCEE-EE-----HHHHHHHH
T ss_pred             CCCcccc-H-HHHHHHHHcCCCccccCCCcceeeHHHHHHHHHHHHhCCC---CCceEEEcCCc-cc-----HHHHHHHH
Confidence            865 211 1 122222222211      1226789999999999997543   28899999886 44     46667777


Q ss_pred             HHHHhccC
Q 025124          238 SRAVERKS  245 (257)
Q Consensus       238 ~~~~~~~~  245 (257)
                      .+..+.+.
T Consensus       256 ~~~~g~~~  263 (342)
T 2x4g_A          256 AELLGQPA  263 (342)
T ss_dssp             HHHHTCCC
T ss_pred             HHHhCCCC
Confidence            77766543

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.57  E-value=2.8e-13  Score=117.68  Aligned_cols=193  Identities=12%  Similarity=0.060  Sum_probs=134.2

Q ss_pred             CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Q 025124           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (257)
Q Consensus        19 ~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (257)
                      +.++.++.+|++|.++++++++..     ++|+|||+||....... ..+.+++...+++|+.++.++++++.+.    +
T Consensus        76 ~~~v~~~~~Dl~d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~~-~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~  145 (404)
T 1i24_A           76 GKSIELYVGDICDFEFLAESFKSF-----EPDSVVHFGEQRSAPYS-MIDRSRAVYTQHNNVIGTLNVLFAIKEF----G  145 (404)
T ss_dssp             CCCCEEEESCTTSHHHHHHHHHHH-----CCSEEEECCSCCCHHHH-TSCHHHHHHHHHHHHHHHHHHHHHHHHH----C
T ss_pred             CCceEEEECCCCCHHHHHHHHhcc-----CCCEEEECCCCCCccch-hhCccchhhhHHHHHHHHHHHHHHHHHh----C
Confidence            457899999999999999888765     69999999996543211 2256677889999999999999988653    1


Q ss_pred             CCCCCCCCCceEEEEccccccc------------------------ccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEE
Q 025124           99 RGQASSSSGGIIINISATLHYT------------------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRV  154 (257)
Q Consensus        99 ~~~~~~~~~g~ii~iss~~~~~------------------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v  154 (257)
                      .       ..+||++||.+.+.                        +..+...|+.+|.+.+.+++.++.++    |+++
T Consensus       146 ~-------~~~~V~~SS~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----gi~~  214 (404)
T 1i24_A          146 E-------ECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW----GIRA  214 (404)
T ss_dssp             T-------TCEEEEECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEE
T ss_pred             C-------CcEEEEeCcHHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc----CCeE
Confidence            0       24799999976442                        22235689999999999999998765    6999


Q ss_pred             EEEecCcccCCCCCC-----------------CCChHHHHHHhhhhcc---------CCCCCCHHhHHHHHHHhccCCCC
Q 025124          155 NGIAPGPIKDTAGVS-----------------KLAPEEIRSKATDYMA---------AYKFGEKWDIAMAALYLASDAGK  208 (257)
Q Consensus       155 ~~v~Pg~v~t~~~~~-----------------~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~  208 (257)
                      +.++||.+.+|....                 ...-..+........+         ...+.+++|+|++++.++.... 
T Consensus       215 ~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~-  293 (404)
T 1i24_A          215 TDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPA-  293 (404)
T ss_dssp             EEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCC-
T ss_pred             EEEecceeeCCCCCccccccccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcc-
Confidence            999999999875421                 0001122222222111         1235679999999999986532 


Q ss_pred             cccC--cEEEecCCcccCCCCCCcHHHHHHHHHH
Q 025124          209 YVNG--NTLIVDGGNWLSNPRDLPKEAVNQLSRA  240 (257)
Q Consensus       209 ~~~G--~~~~~dgg~~~~~~~~~~~~~~~~~~~~  240 (257)
                       ..|  ..+++.+ ..+.     ..++...|.+.
T Consensus       294 -~~g~~~~yni~~-~~~s-----~~e~~~~i~~~  320 (404)
T 1i24_A          294 -KAGEFRVFNQFT-EQFS-----VNELASLVTKA  320 (404)
T ss_dssp             -CTTCEEEEEECS-EEEE-----HHHHHHHHHHH
T ss_pred             -cCCCceEEEECC-CCCc-----HHHHHHHHHHH
Confidence             235  6777755 3322     45667777665

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.57  E-value=1.1e-14  Score=118.02  Aligned_cols=151  Identities=14%  Similarity=0.008  Sum_probs=109.5

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      ++.++.+|++|+++++++++       ++|+||||||....       ...++..+++|+.+++.+++++.    +.+  
T Consensus        64 ~~~~~~~D~~d~~~~~~~~~-------~~d~vi~~ag~~~~-------~~~~~~~~~~n~~~~~~~~~~~~----~~~--  123 (242)
T 2bka_A           64 NVNQEVVDFEKLDDYASAFQ-------GHDVGFCCLGTTRG-------KAGAEGFVRVDRDYVLKSAELAK----AGG--  123 (242)
T ss_dssp             GCEEEECCGGGGGGGGGGGS-------SCSEEEECCCCCHH-------HHHHHHHHHHHTHHHHHHHHHHH----HTT--
T ss_pred             CceEEecCcCCHHHHHHHhc-------CCCEEEECCCcccc-------cCCcccceeeeHHHHHHHHHHHH----HCC--
Confidence            35678899999988776654       79999999996421       24567899999999988887753    333  


Q ss_pred             CCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCe-EEEEEecCcccCCCCCCCCChHHHHHH
Q 025124          101 QASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAI-RVNGIAPGPIKDTAGVSKLAPEEIRSK  179 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi-~v~~v~Pg~v~t~~~~~~~~~~~~~~~  179 (257)
                            .++||++||..+..+  ....|+++|++++.+++.+        ++ +++.|+||++.|++..... .......
T Consensus       124 ------~~~iv~~SS~~~~~~--~~~~Y~~sK~~~e~~~~~~--------~~~~~~~vrpg~v~~~~~~~~~-~~~~~~~  186 (242)
T 2bka_A          124 ------CKHFNLLSSKGADKS--SNFLYLQVKGEVEAKVEEL--------KFDRYSVFRPGVLLCDRQESRP-GEWLVRK  186 (242)
T ss_dssp             ------CCEEEEECCTTCCTT--CSSHHHHHHHHHHHHHHTT--------CCSEEEEEECCEEECTTGGGSH-HHHHHHH
T ss_pred             ------CCEEEEEccCcCCCC--CcchHHHHHHHHHHHHHhc--------CCCCeEEEcCceecCCCCCCcH-HHHHHHH
Confidence                  578999999877643  3467999999999988642        45 8999999999988542211 1122222


Q ss_pred             hhhhcc----CCCCCCHHhHHHHHHHhccCCCC
Q 025124          180 ATDYMA----AYKFGEKWDIAMAALYLASDAGK  208 (257)
Q Consensus       180 ~~~~~~----~~~~~~~~dva~~~~~l~~~~~~  208 (257)
                      .....+    .+++.+++|+|++++++++++..
T Consensus       187 ~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~  219 (242)
T 2bka_A          187 FFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRD  219 (242)
T ss_dssp             HHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCCC
T ss_pred             hhcccCccccCCcccCHHHHHHHHHHHHhCccc
Confidence            222223    45678999999999999987544

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.56  E-value=2.8e-14  Score=125.21  Aligned_cols=179  Identities=12%  Similarity=-0.032  Sum_probs=123.3

Q ss_pred             CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Q 025124           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (257)
Q Consensus        19 ~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (257)
                      +.++.++.+|++|.+++.        .++++|+||||||...       ..++++..+++|+.++.++++++.+     .
T Consensus       129 ~~~v~~v~~Dl~d~~~l~--------~~~~~d~Vih~A~~~~-------~~~~~~~~~~~Nv~g~~~l~~aa~~-----~  188 (427)
T 4f6c_A          129 LSNIEVIVGDFECMDDVV--------LPENMDTIIHAGARTD-------HFGDDDEFEKVNVQGTVDVIRLAQQ-----H  188 (427)
T ss_dssp             HTTEEEEEECC---CCCC--------CSSCCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHH-----T
T ss_pred             cCceEEEeCCCCCcccCC--------CcCCCCEEEECCcccC-------CCCCHHHHHHHHHHHHHHHHHHHHh-----c
Confidence            468999999999988877        4579999999999653       2346778999999999999999876     2


Q ss_pred             CCCCCCCCCceEEEEcccccc------------------cccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           99 RGQASSSSGGIIINISATLHY------------------TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        99 ~~~~~~~~~g~ii~iss~~~~------------------~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                              .++||++||...-                  .+......|+.+|.+.+.+++.++.     .|++++.++||
T Consensus       189 --------~~~~v~~SS~~~G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-----~g~~~~ivRpg  255 (427)
T 4f6c_A          189 --------HARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN-----NGLDGRIVRVG  255 (427)
T ss_dssp             --------TCEEEEEEEGGGGSEECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH-----TTCCEEEEEEC
T ss_pred             --------CCcEEEECchHhCCCccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH-----cCCCEEEEeCC
Confidence                    4679999998760                  0022567899999999999998653     47999999999


Q ss_pred             cccCCCCCCCCCh-------HHHHHHhhhh--------ccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCC
Q 025124          161 PIKDTAGVSKLAP-------EEIRSKATDY--------MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSN  225 (257)
Q Consensus       161 ~v~t~~~~~~~~~-------~~~~~~~~~~--------~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~  225 (257)
                      .+.++........       ..........        .....+..++|+|+++++++....   .|+++++++|..+. 
T Consensus       256 ~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~---~g~~~~l~~~~~~s-  331 (427)
T 4f6c_A          256 NLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKMP-  331 (427)
T ss_dssp             CEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSCC---CCSEEEESCSCCEE-
T ss_pred             eeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCccccceEEEeeHHHHHHHHHHHHcCCC---CCCEEEecCCCCCc-
Confidence            9998765433211       1122221111        112236788999999999997654   78899998875443 


Q ss_pred             CCCCcHHHHHHHH
Q 025124          226 PRDLPKEAVNQLS  238 (257)
Q Consensus       226 ~~~~~~~~~~~~~  238 (257)
                          +.++...|.
T Consensus       332 ----~~el~~~i~  340 (427)
T 4f6c_A          332 ----VKSLLECVK  340 (427)
T ss_dssp             ----HHHHHHHHH
T ss_pred             ----HHHHHHHHH
Confidence                344444444

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.56  E-value=7.5e-14  Score=120.56  Aligned_cols=195  Identities=11%  Similarity=0.000  Sum_probs=135.9

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      ++.++.+|++|.+++.++++.+     ++|+|||+||....    ..+.++++..+++|+.++..+++++.+...+++. 
T Consensus        84 ~~~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~-  153 (381)
T 1n7h_A           84 LMKLHYADLTDASSLRRWIDVI-----KPDEVYNLAAQSHV----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGR-  153 (381)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCCH----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCC-
T ss_pred             ceEEEECCCCCHHHHHHHHHhc-----CCCEEEECCcccCc----cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCC-
Confidence            6888999999999999888765     79999999996432    1235678889999999999999999998765321 


Q ss_pred             CCCCCCCceEEEEcccccccc----------cccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCC
Q 025124          101 QASSSSGGIIINISATLHYTA----------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK  170 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~~----------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~  170 (257)
                            .++||++||...+..          ..+...|+.+|.+.+.+++.++.+++    +.+..+.|..+..|.....
T Consensus       154 ------~~~~v~~SS~~vyg~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~----~~~~~~r~~~~~gp~~~~~  223 (381)
T 1n7h_A          154 ------TVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYG----LFACNGILFNHESPRRGEN  223 (381)
T ss_dssp             ------CCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC----CEEEEEEECCEECTTSCTT
T ss_pred             ------ccEEEEeCcHHHhCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhC----CcEEEEEeCceeCCCCCCc
Confidence                  468999999875432          23457899999999999999998763    5555555555544432111


Q ss_pred             CChH---HHHHHhhhh----------ccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHH
Q 025124          171 LAPE---EIRSKATDY----------MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQL  237 (257)
Q Consensus       171 ~~~~---~~~~~~~~~----------~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~  237 (257)
                      ....   .........          .....+.+++|+|+++++++....    ++.+++.+|..+.     ..++...+
T Consensus       224 ~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~----~~~~~i~~~~~~s-----~~e~~~~i  294 (381)
T 1n7h_A          224 FVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEK----PDDYVVATEEGHT-----VEEFLDVS  294 (381)
T ss_dssp             SHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSSS----CCEEEECCSCEEE-----HHHHHHHH
T ss_pred             chhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHHHHHhCCC----CCeEEeeCCCCCc-----HHHHHHHH
Confidence            1111   111111111          112246789999999999997543    4688888876544     56677777


Q ss_pred             HHHHhcc
Q 025124          238 SRAVERK  244 (257)
Q Consensus       238 ~~~~~~~  244 (257)
                      .+....+
T Consensus       295 ~~~~g~~  301 (381)
T 1n7h_A          295 FGYLGLN  301 (381)
T ss_dssp             HHHTTCC
T ss_pred             HHHcCCC
Confidence            7777654

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.55  E-value=1.5e-13  Score=119.21  Aligned_cols=194  Identities=16%  Similarity=0.059  Sum_probs=133.1

Q ss_pred             eEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCC
Q 025124           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ  101 (257)
Q Consensus        22 ~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  101 (257)
                      +.++.+|++|.++++.++++    ++++|+|||+||.....    .+.++++..+++|+.+++++++++..    .+   
T Consensus        71 ~~~~~~Dl~d~~~~~~~~~~----~~~~d~vih~A~~~~~~----~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~---  135 (397)
T 1gy8_A           71 AALEVGDVRNEDFLNGVFTR----HGPIDAVVHMCAFLAVG----ESVRDPLKYYDNNVVGILRLLQAMLL----HK---  135 (397)
T ss_dssp             CEEEESCTTCHHHHHHHHHH----SCCCCEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHH----TT---
T ss_pred             EEEEECCCCCHHHHHHHHHh----cCCCCEEEECCCccCcC----cchhhHHHHHHHHhHHHHHHHHHHHH----hC---
Confidence            88999999999998877763    46699999999965321    13466788999999999999998643    23   


Q ss_pred             CCCCCCceEEEEcccccccccc------------------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccc
Q 025124          102 ASSSSGGIIINISATLHYTATW------------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK  163 (257)
Q Consensus       102 ~~~~~~g~ii~iss~~~~~~~~------------------~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~  163 (257)
                           .++||++||...+....                  +...|+.+|.+.+.+++.++.++    |++++.++|+.+.
T Consensus       136 -----~~~iv~~SS~~v~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~----gi~~~ilRp~~v~  206 (397)
T 1gy8_A          136 -----CDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY----GIKGICLRYFNAC  206 (397)
T ss_dssp             -----CCEEEEEEEGGGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEE
T ss_pred             -----CCEEEEECCHHHhCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH----CCcEEEEecccee
Confidence                 47899999965442211                  25689999999999999999876    5999999999998


Q ss_pred             CCCCCCC--------CC-hHHHH-----HHhhhh-------------c-------------cCCCCCCHHhHHHHHHHhc
Q 025124          164 DTAGVSK--------LA-PEEIR-----SKATDY-------------M-------------AAYKFGEKWDIAMAALYLA  203 (257)
Q Consensus       164 t~~~~~~--------~~-~~~~~-----~~~~~~-------------~-------------~~~~~~~~~dva~~~~~l~  203 (257)
                      .+.....        .. -..+.     ......             .             ....+.+.+|+|++++.++
T Consensus       207 G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l  286 (397)
T 1gy8_A          207 GAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILAL  286 (397)
T ss_dssp             CCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHH
T ss_pred             CCCccccccccccchhHHHHHHHHHHHHHHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHH
Confidence            7742110        00 01111     111111             0             0113567899999999888


Q ss_pred             cCCCCcc---cC---cEEEecCCcccCCCCCCcHHHHHHHHHHHhcc
Q 025124          204 SDAGKYV---NG---NTLIVDGGNWLSNPRDLPKEAVNQLSRAVERK  244 (257)
Q Consensus       204 ~~~~~~~---~G---~~~~~dgg~~~~~~~~~~~~~~~~~~~~~~~~  244 (257)
                      ......-   .+   ..+++.+|..+.     ..++...|.+....+
T Consensus       287 ~~~~~~~~~~~~~~~~~~ni~~~~~~s-----~~e~~~~i~~~~g~~  328 (397)
T 1gy8_A          287 DYVEKLGPNDKSKYFSVFNLGTSRGYS-----VREVIEVARKTTGHP  328 (397)
T ss_dssp             HHHHTCCTTTGGGSEEEEEESCSCCEE-----HHHHHHHHHHHHCCC
T ss_pred             hcccccccccccCCCcEEEeCCCCccc-----HHHHHHHHHHHhCCC
Confidence            5321110   13   688887765443     567777787777654

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.55  E-value=2.4e-14  Score=120.19  Aligned_cols=190  Identities=14%  Similarity=-0.000  Sum_probs=135.3

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      .+.++.+|++|.+ +..+++       . |+|||+|+....    ..+.++++..+++|+.++.++++++...    +  
T Consensus        44 ~~~~~~~Dl~d~~-~~~~~~-------~-d~vih~A~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~--  104 (312)
T 3ko8_A           44 SAELHVRDLKDYS-WGAGIK-------G-DVVFHFAANPEV----RLSTTEPIVHFNENVVATFNVLEWARQT----G--  104 (312)
T ss_dssp             TSEEECCCTTSTT-TTTTCC-------C-SEEEECCSSCSS----SGGGSCHHHHHHHHHHHHHHHHHHHHHH----T--
T ss_pred             CceEEECccccHH-HHhhcC-------C-CEEEECCCCCCc----hhhhhCHHHHHHHHHHHHHHHHHHHHHc----C--
Confidence            4567889999887 554443       3 999999995332    3456677889999999999999988542    2  


Q ss_pred             CCCCCCCceEEEEcccccccc-----------cccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCC
Q 025124          101 QASSSSGGIIINISATLHYTA-----------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS  169 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~~-----------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~  169 (257)
                            .++||++||...+..           ..+...|+.+|.+.+.+++.++.++    |++++.++|+.+.+|....
T Consensus       105 ------~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~----g~~~~~lrp~~v~g~~~~~  174 (312)
T 3ko8_A          105 ------VRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLF----GVRCLAVRYANVVGPRLRH  174 (312)
T ss_dssp             ------CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEECTTCCS
T ss_pred             ------CCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh----CCCEEEEeeccccCcCCCC
Confidence                  468999999775532           2345789999999999999999876    5999999999999886443


Q ss_pred             CCChHHHHHHhhhh-c---------cCCCCCCHHhHHHHHHHhccC-CCCcccCcEEEecCCcccCCCCCCcHHHHHHHH
Q 025124          170 KLAPEEIRSKATDY-M---------AAYKFGEKWDIAMAALYLASD-AGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLS  238 (257)
Q Consensus       170 ~~~~~~~~~~~~~~-~---------~~~~~~~~~dva~~~~~l~~~-~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~  238 (257)
                      ... ..+....... .         ....+.+++|+|++++.++.. ......|..+++.+|..+.     ..++...+.
T Consensus       175 ~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~~~~~s-----~~e~~~~i~  248 (312)
T 3ko8_A          175 GVI-YDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNVGNVDAVR-----VLDIAQIVA  248 (312)
T ss_dssp             SHH-HHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCSEEEEEESCSSCEE-----HHHHHHHHH
T ss_pred             ChH-HHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCCCcEEEEcCCCcee-----HHHHHHHHH
Confidence            211 1122221111 1         112356799999999999975 1123468899998876554     577788888


Q ss_pred             HHHhccC
Q 025124          239 RAVERKS  245 (257)
Q Consensus       239 ~~~~~~~  245 (257)
                      +..+.+.
T Consensus       249 ~~~g~~~  255 (312)
T 3ko8_A          249 EVLGLRP  255 (312)
T ss_dssp             HHHTCCC
T ss_pred             HHhCCCC
Confidence            8877654

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.55  E-value=1.3e-13  Score=119.13  Aligned_cols=190  Identities=17%  Similarity=0.075  Sum_probs=134.6

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      ++.++.+|++|.+++..+++       ++|+|||+||......   .+.++++..+++|+.++.++++++.+    .+  
T Consensus        73 ~v~~~~~Dl~d~~~~~~~~~-------~~d~Vih~A~~~~~~~---~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~--  136 (379)
T 2c5a_A           73 CDEFHLVDLRVMENCLKVTE-------GVDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMIEAARI----NG--  136 (379)
T ss_dssp             CSEEEECCTTSHHHHHHHHT-------TCSEEEECCCCCCCHH---HHTTCHHHHHHHHHHHHHHHHHHHHH----TT--
T ss_pred             CceEEECCCCCHHHHHHHhC-------CCCEEEECceecCccc---ccccCHHHHHHHHHHHHHHHHHHHHH----cC--
Confidence            46778999999998887764       7999999999643211   11345678999999999999998853    22  


Q ss_pred             CCCCCCCceEEEEcccccccc------------------cccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcc
Q 025124          101 QASSSSGGIIINISATLHYTA------------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI  162 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~~------------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v  162 (257)
                            .++||++||...+..                  ..+...|+.+|.+.+.+++.++.++    |++++.++||.+
T Consensus       137 ------~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~ilrp~~v  206 (379)
T 2c5a_A          137 ------IKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF----GIECRIGRFHNI  206 (379)
T ss_dssp             ------CSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCE
T ss_pred             ------CCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHHHHHHHHHHHHHHHHHH----CCCEEEEEeCce
Confidence                  468999999765432                  2235689999999999999998764    599999999999


Q ss_pred             cCCCCCCCC----ChHHHHHHhhhhc----------cCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCC
Q 025124          163 KDTAGVSKL----APEEIRSKATDYM----------AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRD  228 (257)
Q Consensus       163 ~t~~~~~~~----~~~~~~~~~~~~~----------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~  228 (257)
                      .++......    ....+........          ....+.+++|+|++++.++...    .|+.+++.+|..+.    
T Consensus       207 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~----~~~~~ni~~~~~~s----  278 (379)
T 2c5a_A          207 YGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS----  278 (379)
T ss_dssp             ECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS----CCSCEEECCCCCEE----
T ss_pred             eCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHhhcc----CCCeEEeCCCCccC----
Confidence            987543211    1122222221111          1224677999999999999754    46788888875444    


Q ss_pred             CcHHHHHHHHHHHhccC
Q 025124          229 LPKEAVNQLSRAVERKS  245 (257)
Q Consensus       229 ~~~~~~~~~~~~~~~~~  245 (257)
                       ..++...|.+....+.
T Consensus       279 -~~e~~~~i~~~~g~~~  294 (379)
T 2c5a_A          279 -MNEMAEMVLSFEEKKL  294 (379)
T ss_dssp             -HHHHHHHHHHTTTCCC
T ss_pred             -HHHHHHHHHHHhCCCC
Confidence             5677777777776553

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.54  E-value=1.3e-13  Score=117.47  Aligned_cols=198  Identities=11%  Similarity=-0.009  Sum_probs=136.4

Q ss_pred             CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Q 025124           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (257)
Q Consensus        19 ~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (257)
                      +.++.++.+|++|.+++++++++.     ++|+|||+||.....    ...++++..+++|+.++.++++++.    +.+
T Consensus        57 ~~~~~~~~~D~~~~~~~~~~~~~~-----~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~  123 (348)
T 1ek6_A           57 GRSVEFEEMDILDQGALQRLFKKY-----SFMAVIHFAGLKAVG----ESVQKPLDYYRVNLTGTIQLLEIMK----AHG  123 (348)
T ss_dssp             TCCCEEEECCTTCHHHHHHHHHHC-----CEEEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHH----HTT
T ss_pred             CCceEEEECCCCCHHHHHHHHHhc-----CCCEEEECCCCcCcc----chhhchHHHHHHHHHHHHHHHHHHH----HhC
Confidence            457889999999999988887652     799999999964321    1345678899999999999988753    333


Q ss_pred             CCCCCCCCCceEEEEcccccccc------------cccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCC
Q 025124           99 RGQASSSSGGIIINISATLHYTA------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA  166 (257)
Q Consensus        99 ~~~~~~~~~g~ii~iss~~~~~~------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~  166 (257)
                              .++||++||...+..            .+....|+.+|.+.+.+++.++.+ .  .+++++.++|+.+..+.
T Consensus       124 --------~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~-~--~~~~~~~lR~~~v~G~~  192 (348)
T 1ek6_A          124 --------VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQA-D--KTWNAVLLRYFNPTGAH  192 (348)
T ss_dssp             --------CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHH-C--TTCEEEEEEECEEECCC
T ss_pred             --------CCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCchHHHHHHHHHHHHHHHhc-C--CCcceEEEeeccccCCC
Confidence                    478999999765431            122678999999999999999876 3  36999999999988663


Q ss_pred             CC---C-------CCChHHHHHHhh-hhc---------------cCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCC
Q 025124          167 GV---S-------KLAPEEIRSKAT-DYM---------------AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG  220 (257)
Q Consensus       167 ~~---~-------~~~~~~~~~~~~-~~~---------------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg  220 (257)
                      ..   .       ............ ...               ....+.+++|++++++.++........++.+++.+|
T Consensus       193 ~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~  272 (348)
T 1ek6_A          193 ASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTG  272 (348)
T ss_dssp             TTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCS
T ss_pred             cccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCC
Confidence            10   0       000111112111 111               112356789999999998864321222378888877


Q ss_pred             cccCCCCCCcHHHHHHHHHHHhccC
Q 025124          221 NWLSNPRDLPKEAVNQLSRAVERKS  245 (257)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~  245 (257)
                      ..+.     ..++...+.+....+.
T Consensus       273 ~~~s-----~~e~~~~i~~~~g~~~  292 (348)
T 1ek6_A          273 TGYS-----VLQMVQAMEKASGKKI  292 (348)
T ss_dssp             CCEE-----HHHHHHHHHHHHCSCC
T ss_pred             CCcc-----HHHHHHHHHHHhCCCC
Confidence            5444     5677788887776543

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.54  E-value=1.2e-13  Score=118.50  Aligned_cols=183  Identities=15%  Similarity=0.019  Sum_probs=128.3

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|++|.++++.+      ...++|+|||+||....      +.++++..+++|+.++.++++++..    .  
T Consensus        68 ~~~~~~~~Dl~d~~~~~~~------~~~~~D~vih~A~~~~~------~~~~~~~~~~~Nv~gt~~ll~aa~~----~--  129 (362)
T 3sxp_A           68 FKGEVIAADINNPLDLRRL------EKLHFDYLFHQAAVSDT------TMLNQELVMKTNYQAFLNLLEIARS----K--  129 (362)
T ss_dssp             CCSEEEECCTTCHHHHHHH------TTSCCSEEEECCCCCGG------GCCCHHHHHHHHTHHHHHHHHHHHH----T--
T ss_pred             cCceEEECCCCCHHHHHHh------hccCCCEEEECCccCCc------cccCHHHHHHHHHHHHHHHHHHHHH----c--
Confidence            4568899999999988876      24589999999995432      3456788999999999999998843    2  


Q ss_pred             CCCCCCCCceEEEEccccccccc----------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCC
Q 025124          100 GQASSSSGGIIINISATLHYTAT----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS  169 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~~~----------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~  169 (257)
                             +++||++||...+...          .+...|+.+|.+.+.+++.++.+      +++..++|+.+..|....
T Consensus       130 -------~~~~V~~SS~~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~------~~~~~lR~~~v~Gp~~~~  196 (362)
T 3sxp_A          130 -------KAKVIYASSAGVYGNTKAPNVVGKNESPENVYGFSKLCMDEFVLSHSND------NVQVGLRYFNVYGPREFY  196 (362)
T ss_dssp             -------TCEEEEEEEGGGGCSCCSSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT------SCEEEEEECSEESTTCGG
T ss_pred             -------CCcEEEeCcHHHhCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhcc------CCEEEEEeCceeCcCCCC
Confidence                   3459999996544322          12346999999999999887643      567778888887664322


Q ss_pred             C----CChHHHHHHhhhhcc---------CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHH
Q 025124          170 K----LAPEEIRSKATDYMA---------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQ  236 (257)
Q Consensus       170 ~----~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~  236 (257)
                      .    .....+........+         ...+.+++|+|+++++++....   +| .+++.+|..+.     ..++...
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~~---~g-~~~i~~~~~~s-----~~e~~~~  267 (362)
T 3sxp_A          197 KEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQK---SG-VYNVGYSQARS-----YNEIVSI  267 (362)
T ss_dssp             GGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTCSS---CE-EEEESCSCEEE-----HHHHHHH
T ss_pred             CCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhcCC---CC-EEEeCCCCCcc-----HHHHHHH
Confidence            1    111122222222111         1235679999999999997653   57 99998886554     5777888


Q ss_pred             HHHHHh
Q 025124          237 LSRAVE  242 (257)
Q Consensus       237 ~~~~~~  242 (257)
                      +.+.+.
T Consensus       268 i~~~~g  273 (362)
T 3sxp_A          268 LKEHLG  273 (362)
T ss_dssp             HHHHHC
T ss_pred             HHHHcC
Confidence            888877

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.54  E-value=3.6e-13  Score=115.71  Aligned_cols=196  Identities=12%  Similarity=0.058  Sum_probs=134.2

Q ss_pred             CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Q 025124           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (257)
Q Consensus        19 ~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (257)
                      +.++.++.+|++|.+++.++++.+     ++|+|||+||....    ..+.++++..+++|+.++.++++++.+...+ .
T Consensus        54 ~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~  123 (372)
T 1db3_A           54 NPKFHLHYGDLSDTSNLTRILREV-----QPDEVYNLGAMSHV----AVSFESPEYTADVDAMGTLRLLEAIRFLGLE-K  123 (372)
T ss_dssp             -CCEEECCCCSSCHHHHHHHHHHH-----CCSEEEECCCCCTT----TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-T
T ss_pred             CCceEEEECCCCCHHHHHHHHHhc-----CCCEEEECCcccCc----cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-C
Confidence            357889999999999999888765     79999999996543    2244567789999999999999998765432 1


Q ss_pred             CCCCCCCCCceEEEEccccccccc-----------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCC
Q 025124           99 RGQASSSSGGIIINISATLHYTAT-----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG  167 (257)
Q Consensus        99 ~~~~~~~~~g~ii~iss~~~~~~~-----------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~  167 (257)
                              .++||++||...+.+.           .+...|+.+|.+.+.+++.++.++.    +.+..+.|..+..|..
T Consensus       124 --------~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~----~~~~~~r~~~~~gp~~  191 (372)
T 1db3_A          124 --------KTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYG----MYACNGILFNHESPRR  191 (372)
T ss_dssp             --------TCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC----CCEEEEEECCEECTTS
T ss_pred             --------CcEEEEeCChhhhCCCCCCCCCccCCCCCCChHHHHHHHHHHHHHHHHHHhC----CCeEEEEECCccCCCC
Confidence                    3789999997654321           2356899999999999999998763    6666667666655432


Q ss_pred             CCCCChH---HHHHHhhhhc----------cCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHH
Q 025124          168 VSKLAPE---EIRSKATDYM----------AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAV  234 (257)
Q Consensus       168 ~~~~~~~---~~~~~~~~~~----------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~  234 (257)
                      .......   ..........          ....+.+.+|++++++.++....    +..+++.+|..+.     ..++.
T Consensus       192 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~----~~~~ni~~~~~~s-----~~e~~  262 (372)
T 1db3_A          192 GETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQ----PEDFVIATGVQYS-----VRQFV  262 (372)
T ss_dssp             CTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSSS----CCCEEECCCCCEE-----HHHHH
T ss_pred             CCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHHHHHhcCC----CceEEEcCCCcee-----HHHHH
Confidence            2111111   1111111110          11236789999999999886432    4677777665443     56777


Q ss_pred             HHHHHHHhccC
Q 025124          235 NQLSRAVERKS  245 (257)
Q Consensus       235 ~~~~~~~~~~~  245 (257)
                      ..+.+....+.
T Consensus       263 ~~i~~~~g~~~  273 (372)
T 1db3_A          263 EMAAAQLGIKL  273 (372)
T ss_dssp             HHHHHTTTEEE
T ss_pred             HHHHHHhCCCc
Confidence            88887776643

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.53  E-value=2.2e-13  Score=116.60  Aligned_cols=185  Identities=11%  Similarity=0.047  Sum_probs=129.7

Q ss_pred             EccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCC
Q 025124           26 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSS  105 (257)
Q Consensus        26 ~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~  105 (257)
                      .+|+++.+.++.+++.  ..++++|+|||+||....      +.++++..+++|+.++.++++++.+.    +       
T Consensus        95 ~~d~~~~~~~~~~~~~--~~~~~~d~Vih~A~~~~~------~~~~~~~~~~~n~~~~~~ll~a~~~~----~-------  155 (357)
T 2x6t_A           95 ADYMDKEDFLIQIMAG--EEFGDVEAIFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLER----E-------  155 (357)
T ss_dssp             SEEEEHHHHHHHHHTT--CCCSSCCEEEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHHH----T-------
T ss_pred             eeecCcHHHHHHHHhh--cccCCCCEEEECCcccCC------ccCCHHHHHHHHHHHHHHHHHHHHHc----C-------
Confidence            3677777776666542  124579999999996543      23456789999999999999998763    2       


Q ss_pred             CCceEEEEcccccccccc-----------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCC----
Q 025124          106 SGGIIINISATLHYTATW-----------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----  170 (257)
Q Consensus       106 ~~g~ii~iss~~~~~~~~-----------~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~----  170 (257)
                       . +||++||...+....           ....|+.+|.+.+.+++.++.+    .|++++.++|+.+.++.....    
T Consensus       156 -~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~g~~~~ilRp~~v~Gp~~~~~~~~~  229 (357)
T 2x6t_A          156 -I-PFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQILPE----ANSQIVGFRYFNVYGPREGHKGSMA  229 (357)
T ss_dssp             -C-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHHHHHHHHHHHGGG----CSSCEEEEEECEEESSSCTTCGGGS
T ss_pred             -C-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHHHHHHHHHHHHHH----cCCCEEEEecCeEECCCCCCCcccc
Confidence             3 699999987653322           2568999999999999998764    379999999999998754311    


Q ss_pred             CChHHHHHHhhhh---------cc-CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHHHHH
Q 025124          171 LAPEEIRSKATDY---------MA-AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRA  240 (257)
Q Consensus       171 ~~~~~~~~~~~~~---------~~-~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~~  240 (257)
                      ..-..+.......         .. ...+.+++|+|+++++++....    |+.+++.+|..+.     ..++...+.+.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~----~~~~~i~~~~~~s-----~~e~~~~i~~~  300 (357)
T 2x6t_A          230 SVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV----SGIFNLGTGRAES-----FQAVADATLAY  300 (357)
T ss_dssp             CHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHHCC----CEEEEESCSCCEE-----HHHHHHHHHHH
T ss_pred             hHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhcCC----CCeEEecCCCccc-----HHHHHHHHHHH
Confidence            0011121211111         11 2345789999999999997543    7899998875544     56778888888


Q ss_pred             Hhcc
Q 025124          241 VERK  244 (257)
Q Consensus       241 ~~~~  244 (257)
                      ...+
T Consensus       301 ~g~~  304 (357)
T 2x6t_A          301 HKKG  304 (357)
T ss_dssp             HTCC
T ss_pred             cCCC
Confidence            7765

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.52  E-value=2.4e-13  Score=116.02  Aligned_cols=192  Identities=12%  Similarity=-0.001  Sum_probs=139.9

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|++|.+++..+++       ++|+|||+||....    ....++....+++|+.++.++++++.+.    + 
T Consensus        79 ~~~~~~~~Dl~d~~~~~~~~~-------~~d~Vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-  142 (351)
T 3ruf_A           79 SRFCFIEGDIRDLTTCEQVMK-------GVDHVLHQAALGSV----PRSIVDPITTNATNITGFLNILHAAKNA----Q-  142 (351)
T ss_dssp             TTEEEEECCTTCHHHHHHHTT-------TCSEEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHT----T-
T ss_pred             CceEEEEccCCCHHHHHHHhc-------CCCEEEECCccCCc----chhhhCHHHHHHHHHHHHHHHHHHHHHc----C-
Confidence            578999999999998887765       79999999996432    1244566788999999999999887542    2 


Q ss_pred             CCCCCCCCceEEEEcccccccccc-----------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCC
Q 025124          100 GQASSSSGGIIINISATLHYTATW-----------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  168 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~~~~-----------~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~  168 (257)
                             -++||++||...+....           ....|+.+|.+.+.+++.++.+.    |++++.++|+.+..+...
T Consensus       143 -------~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----g~~~~ilRp~~v~G~~~~  211 (351)
T 3ruf_A          143 -------VQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTY----GFKTIGLRYFNVFGRRQD  211 (351)
T ss_dssp             -------CSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCCEEEEECSEESTTCC
T ss_pred             -------CCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHHHHHHHHHHHHHHHh----CCCEEEEeeCceeCcCCC
Confidence                   46899999987653322           24689999999999999998875    589999999999987543


Q ss_pred             CCC----ChHHHHHHhhhhcc---------CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHH
Q 025124          169 SKL----APEEIRSKATDYMA---------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVN  235 (257)
Q Consensus       169 ~~~----~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~  235 (257)
                      ...    .-..+........+         ...+.+.+|+|++++.++... ....|+.+++.+|..+.     ..++..
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~s-----~~e~~~  285 (351)
T 3ruf_A          212 PNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALAK-DSAKDNIYNVAVGDRTT-----LNELSG  285 (351)
T ss_dssp             CCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCC-GGGCSEEEEESCSCCEE-----HHHHHH
T ss_pred             CCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhhc-cccCCCEEEeCCCCccc-----HHHHHH
Confidence            221    11222222222221         123567999999999988652 23568999998886554     577788


Q ss_pred             HHHHHHhcc
Q 025124          236 QLSRAVERK  244 (257)
Q Consensus       236 ~~~~~~~~~  244 (257)
                      .+.+...++
T Consensus       286 ~i~~~~g~~  294 (351)
T 3ruf_A          286 YIYDELNLI  294 (351)
T ss_dssp             HHHHHHHTT
T ss_pred             HHHHHhCcc
Confidence            888888773

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.52  E-value=2.3e-13  Score=113.17  Aligned_cols=194  Identities=14%  Similarity=0.123  Sum_probs=136.9

Q ss_pred             HHHHHHHHhcCCCeEEE---EccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHH
Q 025124            9 RSAVAALHSLGIPAIGL---EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI   85 (257)
Q Consensus         9 ~~~~~~l~~~~~~~~~~---~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~   85 (257)
                      ..+++.|.+.|.++..+   .+|++|.+++.++++..     ++|+|||+||....    +...++++..+++|+.++.+
T Consensus        26 ~~l~~~L~~~g~~V~~~~r~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~   96 (292)
T 1vl0_A           26 REIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEK-----KPNVVINCAAHTAV----DKCEEQYDLAYKINAIGPKN   96 (292)
T ss_dssp             HHHHHHHTTSSEEEEEECTTTCCTTCHHHHHHHHHHH-----CCSEEEECCCCCCH----HHHHHCHHHHHHHHTHHHHH
T ss_pred             HHHHHHHHhCCCeEEeccCccCCCCCHHHHHHHHHhc-----CCCEEEECCccCCH----HHHhcCHHHHHHHHHHHHHH
Confidence            45666777766666655   48999999998888765     79999999996432    12346788899999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccc-----------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEE
Q 025124           86 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-----------YQIHVSAAKAAVDSITRSLALEWGTDYAIRV  154 (257)
Q Consensus        86 l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~-----------~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v  154 (257)
                      +++++.+.             +.+||++||...+.+..           +...|+.+|.+.+.+++.++.        .+
T Consensus        97 l~~a~~~~-------------~~~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~--------~~  155 (292)
T 1vl0_A           97 LAAAAYSV-------------GAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNP--------KY  155 (292)
T ss_dssp             HHHHHHHH-------------TCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCS--------SE
T ss_pred             HHHHHHHc-------------CCeEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHhhCC--------Ce
Confidence            99998763             23799999986554322           356899999999999987542        35


Q ss_pred             EEEecCcccCCCCCCCCChHHHHHHhhhhc-------cCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCC
Q 025124          155 NGIAPGPIKDTAGVSKLAPEEIRSKATDYM-------AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPR  227 (257)
Q Consensus       155 ~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~  227 (257)
                      ..++|+.+..+ . ..+ ...+........       ....+.+++|+|+++++++...    .|+.+++.+|..+.   
T Consensus       156 ~~lR~~~v~G~-~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~----~~~~~~i~~~~~~s---  225 (292)
T 1vl0_A          156 YIVRTAWLYGD-G-NNF-VKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEK----NYGTFHCTCKGICS---  225 (292)
T ss_dssp             EEEEECSEESS-S-SCH-HHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHT----CCEEEECCCBSCEE---
T ss_pred             EEEeeeeeeCC-C-cCh-HHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHHHHHhcC----CCcEEEecCCCCcc---
Confidence            67888888755 1 111 112222211111       1234678999999999999764    57899998875444   


Q ss_pred             CCcHHHHHHHHHHHhcc
Q 025124          228 DLPKEAVNQLSRAVERK  244 (257)
Q Consensus       228 ~~~~~~~~~~~~~~~~~  244 (257)
                        ..++...+.+....+
T Consensus       226 --~~e~~~~i~~~~g~~  240 (292)
T 1vl0_A          226 --WYDFAVEIFRLTGID  240 (292)
T ss_dssp             --HHHHHHHHHHHHCCC
T ss_pred             --HHHHHHHHHHHhCCC
Confidence              567788888887765

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.52  E-value=5.4e-13  Score=113.17  Aligned_cols=181  Identities=15%  Similarity=0.050  Sum_probs=127.7

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      ++.++.+|++|.++++++++.     +++|+|||+||.....     +.++++  +++|+.++.++++++.+    .+  
T Consensus        67 ~~~~~~~Dl~d~~~~~~~~~~-----~~~D~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~--  128 (333)
T 2q1w_A           67 NLTFVEGSIADHALVNQLIGD-----LQPDAVVHTAASYKDP-----DDWYND--TLTNCVGGSNVVQAAKK----NN--  128 (333)
T ss_dssp             TEEEEECCTTCHHHHHHHHHH-----HCCSEEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHHH----TT--
T ss_pred             CceEEEEeCCCHHHHHHHHhc-----cCCcEEEECceecCCC-----ccCChH--HHHHHHHHHHHHHHHHH----hC--
Confidence            567889999999999888875     2799999999965432     334445  99999999999999876    22  


Q ss_pred             CCCCCCCceEEEEccccccc----cc--------ccc-hhhHHHHHHHHHHHHH-HHHHhcCCCCeEEEEEecCcccCCC
Q 025124          101 QASSSSGGIIINISATLHYT----AT--------WYQ-IHVSAAKAAVDSITRS-LALEWGTDYAIRVNGIAPGPIKDTA  166 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~----~~--------~~~-~~Y~~sK~a~~~l~~~-la~e~~~~~gi~v~~v~Pg~v~t~~  166 (257)
                            .++||++||...+.    ..        .+. ..|+.+|.+.+.+++. ++         ++..++|+.+..|.
T Consensus       129 ------~~~iV~~SS~~~~g~~~~~~~~~~~E~~~p~~~~Y~~sK~~~E~~~~~s~~---------~~~ilR~~~v~gp~  193 (333)
T 2q1w_A          129 ------VGRFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLEYSGL---------DFVTFRLANVVGPR  193 (333)
T ss_dssp             ------CSEEEEEEEGGGGCSCCCSSSBCTTSCCCCTTCHHHHHHHHHHHHHHHHTC---------CEEEEEESEEESTT
T ss_pred             ------CCEEEEECcHHHhCCCcccCCCCcCCCCCCCCCchHHHHHHHHHHHHhhhC---------CeEEEeeceEECcC
Confidence                  47899999976653    21        223 7899999999999887 54         45667787777664


Q ss_pred             CCCCCChHHHHHHhhh------hccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHHHHH
Q 025124          167 GVSKLAPEEIRSKATD------YMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRA  240 (257)
Q Consensus       167 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~~  240 (257)
                      ..... ...+......      ..+...+.+++|+|+++++++....    |+.+++++|..+.     ..++...+.+.
T Consensus       194 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~----g~~~~v~~~~~~s-----~~e~~~~i~~~  263 (333)
T 2q1w_A          194 NVSGP-LPIFFQRLSEGKKCFVTKARRDFVFVKDLARATVRAVDGVG----HGAYHFSSGTDVA-----IKELYDAVVEA  263 (333)
T ss_dssp             CCSSH-HHHHHHHHHTTCCCEEEECEECEEEHHHHHHHHHHHHTTCC----CEEEECSCSCCEE-----HHHHHHHHHHH
T ss_pred             CcCcH-HHHHHHHHHcCCeeeCCCceEeeEEHHHHHHHHHHHHhcCC----CCEEEeCCCCCcc-----HHHHHHHHHHH
Confidence            11011 1112111111      1223456789999999999997643    8899999886554     56778888888


Q ss_pred             Hhcc
Q 025124          241 VERK  244 (257)
Q Consensus       241 ~~~~  244 (257)
                      ...+
T Consensus       264 ~g~~  267 (333)
T 2q1w_A          264 MALP  267 (333)
T ss_dssp             TTCS
T ss_pred             hCCC
Confidence            7765

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.51  E-value=7.8e-13  Score=112.28  Aligned_cols=193  Identities=15%  Similarity=0.078  Sum_probs=131.6

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|++|.+++.++++.+     ++|+|||+||....    +.+.++++..+++|+.+++++++++.+. ..   
T Consensus        52 ~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~---  118 (345)
T 2z1m_A           52 NDVKIIHMDLLEFSNIIRTIEKV-----QPDEVYNLAAQSFV----GVSFEQPILTAEVDAIGVLRILEALRTV-KP---  118 (345)
T ss_dssp             TTEEECCCCTTCHHHHHHHHHHH-----CCSEEEECCCCCCH----HHHTTSHHHHHHHHTHHHHHHHHHHHHH-CT---
T ss_pred             CceeEEECCCCCHHHHHHHHHhc-----CCCEEEECCCCcch----hhhhhCHHHHHHHHHHHHHHHHHHHHHh-CC---
Confidence            36888999999999999988876     79999999996431    1234567889999999999999998752 11   


Q ss_pred             CCCCCCCCceEEEEcccccc-----------cccccchhhHHHHHHHHHHHHHHHHHhcC--CCCeEEEEEecCcccCCC
Q 025124          100 GQASSSSGGIIINISATLHY-----------TATWYQIHVSAAKAAVDSITRSLALEWGT--DYAIRVNGIAPGPIKDTA  166 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~-----------~~~~~~~~Y~~sK~a~~~l~~~la~e~~~--~~gi~v~~v~Pg~v~t~~  166 (257)
                             .++||++||...+           .+..+...|+.+|.+.+.+++.++.+++-  ..++.++.+.||...+.+
T Consensus       119 -------~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~  191 (345)
T 2z1m_A          119 -------DTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFV  191 (345)
T ss_dssp             -------TCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSH
T ss_pred             -------CceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcch
Confidence                   2789999998643           22345678999999999999999988641  113445566677665432


Q ss_pred             CCCCCChHHHHHHhhhh----------ccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHH
Q 025124          167 GVSKLAPEEIRSKATDY----------MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQ  236 (257)
Q Consensus       167 ~~~~~~~~~~~~~~~~~----------~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~  236 (257)
                      ...  . ..........          .....+.+++|+|++++++++...    +..+++.+|..+.     ..++.+.
T Consensus       192 ~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~~----~~~~~i~~~~~~s-----~~e~~~~  259 (345)
T 2z1m_A          192 TRK--I-TYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQPE----PDDYVIATGETHT-----VREFVEK  259 (345)
T ss_dssp             HHH--H-HHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSSS----CCCEEECCSCCEE-----HHHHHHH
T ss_pred             hHH--H-HHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCCC----CceEEEeCCCCcc-----HHHHHHH
Confidence            100  0 0011111111          011237889999999999997542    3567777664443     5677788


Q ss_pred             HHHHHhcc
Q 025124          237 LSRAVERK  244 (257)
Q Consensus       237 ~~~~~~~~  244 (257)
                      +.+....+
T Consensus       260 i~~~~g~~  267 (345)
T 2z1m_A          260 AAKIAGFD  267 (345)
T ss_dssp             HHHHTTCC
T ss_pred             HHHHhCCC
Confidence            88777665

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.51  E-value=3.7e-13  Score=116.16  Aligned_cols=191  Identities=10%  Similarity=-0.046  Sum_probs=134.0

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-C
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG-G   98 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~   98 (257)
                      .++.++.+|++|.++++.+++       ++|+|||+||.....    .+.++++..+++|+.++.++++++.    +. +
T Consensus        78 ~~v~~~~~Dl~d~~~l~~~~~-------~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~  142 (377)
T 2q1s_A           78 PAVRFSETSITDDALLASLQD-------EYDYVFHLATYHGNQ----SSIHDPLADHENNTLTTLKLYERLK----HFKR  142 (377)
T ss_dssp             TTEEEECSCTTCHHHHHHCCS-------CCSEEEECCCCSCHH----HHHHCHHHHHHHHTHHHHHHHHHHT----TCSS
T ss_pred             CceEEEECCCCCHHHHHHHhh-------CCCEEEECCCccCch----hhhhCHHHHHHHHHHHHHHHHHHHH----HhCC
Confidence            357788999999988776654       799999999964321    2345678899999999999988873    22 2


Q ss_pred             CCCCCCCCCceEEEEccccccc----------------cc-ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           99 RGQASSSSGGIIINISATLHYT----------------AT-WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        99 ~~~~~~~~~g~ii~iss~~~~~----------------~~-~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                              -++||++||...+.                +. .+...|+.+|.+.+.+++.++.++    |++++.++||.
T Consensus       143 --------~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~ilRp~~  210 (377)
T 2q1s_A          143 --------LKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH----QLPTVRARFQN  210 (377)
T ss_dssp             --------CCEEEEEEEC--------------CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECC
T ss_pred             --------CCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchHHHHHHHHHHHHHHHHHh----CCCEEEEeecc
Confidence                    46899999975431                21 345689999999999999998764    69999999999


Q ss_pred             ccCCCC---------CC----CCChHHHHHHhhhhcc---------CCCCCCHHhHHHH-HHHhccCCCCcccCcEEEec
Q 025124          162 IKDTAG---------VS----KLAPEEIRSKATDYMA---------AYKFGEKWDIAMA-ALYLASDAGKYVNGNTLIVD  218 (257)
Q Consensus       162 v~t~~~---------~~----~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~-~~~l~~~~~~~~~G~~~~~d  218 (257)
                      +.++..         ..    ......+........+         ...+..++|+|++ ++.++....   +| .+++.
T Consensus       211 v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~---~g-~~~i~  286 (377)
T 2q1s_A          211 VYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDVANGLIACAADGTP---GG-VYNIA  286 (377)
T ss_dssp             EECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCT---TE-EEECC
T ss_pred             EECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC---CC-eEEec
Confidence            998754         11    1111222222222222         1235669999999 999987643   67 99998


Q ss_pred             CCcccCCCCCCcHHHHHHHHHHHhccCC
Q 025124          219 GGNWLSNPRDLPKEAVNQLSRAVERKSR  246 (257)
Q Consensus       219 gg~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (257)
                      +|..+.     ..++...+.+....+.+
T Consensus       287 ~~~~~s-----~~e~~~~i~~~~g~~~~  309 (377)
T 2q1s_A          287 SGKETS-----IADLATKINEITGNNTE  309 (377)
T ss_dssp             CCCCEE-----HHHHHHHHHHHHTCCSC
T ss_pred             CCCcee-----HHHHHHHHHHHhCCCCC
Confidence            875544     57778888888876543

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.50  E-value=1.1e-13  Score=116.47  Aligned_cols=201  Identities=13%  Similarity=0.041  Sum_probs=114.3

Q ss_pred             HHHHHHHHhcCCCeEE----------EEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHH
Q 025124            9 RSAVAALHSLGIPAIG----------LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI   78 (257)
Q Consensus         9 ~~~~~~l~~~~~~~~~----------~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~   78 (257)
                      ..+++.|.+.|.++..          +.+|++|.+++.++++..     ++|+|||+||....    ..+.++++..+++
T Consensus        16 ~~l~~~L~~~g~~V~~~~r~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~~----~~~~~~~~~~~~~   86 (315)
T 2ydy_A           16 RAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDF-----QPHVIVHCAAERRP----DVVENQPDAASQL   86 (315)
T ss_dssp             HHHHHHHHTTTCEEEEEC------------------CHHHHHHH-----CCSEEEECC----------------------
T ss_pred             HHHHHHHHhCCCeEEEEccCCCCCCeEEecCCCHHHHHHHHHhh-----CCCEEEECCcccCh----hhhhcCHHHHHHH
Confidence            3455666666655543          448999999888888764     79999999996432    1245677889999


Q ss_pred             HhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccc----------cccchhhHHHHHHHHHHHHHHHHHhcC
Q 025124           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA----------TWYQIHVSAAKAAVDSITRSLALEWGT  148 (257)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~----------~~~~~~Y~~sK~a~~~l~~~la~e~~~  148 (257)
                      |+.++.++++++.+.             +++||++||...+.+          ..+...|+.+|.+.+.+++.++.++  
T Consensus        87 n~~~~~~l~~a~~~~-------------~~~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--  151 (315)
T 2ydy_A           87 NVDASGNLAKEAAAV-------------GAFLIYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGA--  151 (315)
T ss_dssp             -CHHHHHHHHHHHHH-------------TCEEEEEEEGGGSCSSSCSBCTTSCCCCCSHHHHHHHHHHHHHHHHCTTC--
T ss_pred             HHHHHHHHHHHHHHc-------------CCeEEEEchHHHcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCe--
Confidence            999999999998763             357999999876544          2345789999999999999874322  


Q ss_pred             CCCeEEEEEecCcccCCCCCC--CCChHHHHHHhh-h-------hccCCCCCCHHhHHHHHHHhccCC-CCcccCcEEEe
Q 025124          149 DYAIRVNGIAPGPIKDTAGVS--KLAPEEIRSKAT-D-------YMAAYKFGEKWDIAMAALYLASDA-GKYVNGNTLIV  217 (257)
Q Consensus       149 ~~gi~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~-~-------~~~~~~~~~~~dva~~~~~l~~~~-~~~~~G~~~~~  217 (257)
                            ..++|+.+..+....  .+... +..... .       ......+.+++|+|+++++++... .....|+.+++
T Consensus       152 ------~~lR~~~v~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~i  224 (315)
T 2ydy_A          152 ------AVLRIPILYGEVEKLEESAVTV-MFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHW  224 (315)
T ss_dssp             ------EEEEECSEECSCSSGGGSTTGG-GHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHHHHHHHHTCTTCCEEEEC
T ss_pred             ------EEEeeeeeeCCCCcccccHHHH-HHHHHHhcCCCeeeccCceECcEEHHHHHHHHHHHHHhhccccCCCCeEEE
Confidence                  345555554332110  11111 111111 1       112345678999999999998643 12246789999


Q ss_pred             cCCcccCCCCCCcHHHHHHHHHHHhccC
Q 025124          218 DGGNWLSNPRDLPKEAVNQLSRAVERKS  245 (257)
Q Consensus       218 dgg~~~~~~~~~~~~~~~~~~~~~~~~~  245 (257)
                      .+|..+.     ..++...+.+....+.
T Consensus       225 ~~~~~~s-----~~e~~~~i~~~~g~~~  247 (315)
T 2ydy_A          225 SGNEQMT-----KYEMACAIADAFNLPS  247 (315)
T ss_dssp             CCSCCBC-----HHHHHHHHHHHTTCCC
T ss_pred             cCCCccc-----HHHHHHHHHHHhCCCh
Confidence            8876544     6777888888877654

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.49  E-value=1.2e-12  Score=112.74  Aligned_cols=194  Identities=13%  Similarity=0.048  Sum_probs=134.7

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|++|.+++.++++.+     ++|+|||+||.....    .+.++++..+++|+.++.++++++.+...+ . 
T Consensus        79 ~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~-~-  147 (375)
T 1t2a_A           79 GNMKLHYGDLTDSTCLVKIINEV-----KPTEIYNLGAQSHVK----ISFDLAEYTADVDGVGTLRLLDAVKTCGLI-N-  147 (375)
T ss_dssp             -CEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHTTCT-T-
T ss_pred             CCceEEEccCCCHHHHHHHHHhc-----CCCEEEECCCccccc----ccccCHHHHHHHHHHHHHHHHHHHHHhCCC-c-
Confidence            46788999999999999888765     799999999964321    134677889999999999999998765431 1 


Q ss_pred             CCCCCCCCceEEEEcccccccc-----------cccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCC
Q 025124          100 GQASSSSGGIIINISATLHYTA-----------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  168 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~~-----------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~  168 (257)
                             .++||++||...+..           ..+...|+.+|.+.+.+++.++.++    ++.+..++|+.+..|...
T Consensus       148 -------~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~i~r~~~~~gp~~~  216 (375)
T 1t2a_A          148 -------SVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY----NLFAVNGILFNHESPRRG  216 (375)
T ss_dssp             -------TCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCEECTTSC
T ss_pred             -------cceEEEecchhhhCCCCCCCCCccCCCCCCChhHHHHHHHHHHHHHHHHHh----CCCEEEEecccccCCCCC
Confidence                   378999999876532           1245689999999999999999875    478888888877665432


Q ss_pred             CCCChH---HHHHHhhhh-c---------cCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHH
Q 025124          169 SKLAPE---EIRSKATDY-M---------AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVN  235 (257)
Q Consensus       169 ~~~~~~---~~~~~~~~~-~---------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~  235 (257)
                      ......   ......... .         ....+.+++|++++++.++....    +..+++.+|..+.     ..++.+
T Consensus       217 ~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~----~~~~ni~~~~~~s-----~~e~~~  287 (375)
T 1t2a_A          217 ANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE----PEDFVIATGEVHS-----VREFVE  287 (375)
T ss_dssp             TTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSS----CCCEEECCSCCEE-----HHHHHH
T ss_pred             CCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHHHHhcCC----CceEEEeCCCccc-----HHHHHH
Confidence            211111   111111111 1         11236789999999999986532    3567776664433     567777


Q ss_pred             HHHHHHhcc
Q 025124          236 QLSRAVERK  244 (257)
Q Consensus       236 ~~~~~~~~~  244 (257)
                      .+.+....+
T Consensus       288 ~i~~~~g~~  296 (375)
T 1t2a_A          288 KSFLHIGKT  296 (375)
T ss_dssp             HHHHHTTCC
T ss_pred             HHHHHhCCC
Confidence            787777665

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.49  E-value=3.7e-13  Score=108.70  Aligned_cols=148  Identities=11%  Similarity=0.021  Sum_probs=100.2

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|++|+++++++++       ++|+||||+|...           +           ...++.+++.|++.+ 
T Consensus        67 ~~~~~~~~Dl~d~~~~~~~~~-------~~D~vv~~a~~~~-----------~-----------~~~~~~~~~~~~~~~-  116 (236)
T 3qvo_A           67 TNSQIIMGDVLNHAALKQAMQ-------GQDIVYANLTGED-----------L-----------DIQANSVIAAMKACD-  116 (236)
T ss_dssp             TTEEEEECCTTCHHHHHHHHT-------TCSEEEEECCSTT-----------H-----------HHHHHHHHHHHHHTT-
T ss_pred             CCcEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCCc-----------h-----------hHHHHHHHHHHHHcC-
Confidence            367889999999999888875       6899999998511           1           123567888888765 


Q ss_pred             CCCCCCCCceEEEEcccccccccccc-------------hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCC
Q 025124          100 GQASSSSGGIIINISATLHYTATWYQ-------------IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA  166 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~~~~~~-------------~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~  166 (257)
                             .++||++||...+.+.+..             ..|..++           ..+. +.||+++.|+||++.++.
T Consensus       117 -------~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~l~-~~gi~~~~vrPg~i~~~~  177 (236)
T 3qvo_A          117 -------VKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAA-----------DAIE-ASGLEYTILRPAWLTDED  177 (236)
T ss_dssp             -------CCEEEEECCCCC----------------CGGGHHHHHHH-----------HHHH-TSCSEEEEEEECEEECCS
T ss_pred             -------CCEEEEEecceecCCCCcccccchhhcccchHHHHHHHH-----------HHHH-HCCCCEEEEeCCcccCCC
Confidence                   6899999998776554331             2232222           2234 679999999999998774


Q ss_pred             CCCCCChHHHHHHhhhhcc-CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          167 GVSKLAPEEIRSKATDYMA-AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      .....       ......+ .+++++++|+|++++++++++..++ |+.+.++++.+..
T Consensus       178 ~~~~~-------~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~-g~~~~i~~~~~~~  228 (236)
T 3qvo_A          178 IIDYE-------LTSRNEPFKGTIVSRKSVAALITDIIDKPEKHI-GENIGINQPGTDG  228 (236)
T ss_dssp             CCCCE-------EECTTSCCSCSEEEHHHHHHHHHHHHHSTTTTT-TEEEEEECSSCCC
T ss_pred             CcceE-------EeccCCCCCCcEECHHHHHHHHHHHHcCccccc-CeeEEecCCCCCC
Confidence            32110       0111112 2456899999999999999877655 8889888876544

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.49  E-value=9.7e-13  Score=111.20  Aligned_cols=195  Identities=13%  Similarity=0.021  Sum_probs=134.0

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      ++.++.+|++|.+++++++++     .++|+|||+||.....    .+.++++..+++|+.++.++++++..    .+  
T Consensus        45 ~~~~~~~D~~~~~~~~~~~~~-----~~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~--  109 (330)
T 2c20_A           45 GAKFYNGDLRDKAFLRDVFTQ-----ENIEAVMHFAADSLVG----VSMEKPLQYYNNNVYGALCLLEVMDE----FK--  109 (330)
T ss_dssp             TSEEEECCTTCHHHHHHHHHH-----SCEEEEEECCCCCCHH----HHHHSHHHHHHHHHHHHHHHHHHHHH----TT--
T ss_pred             CcEEEECCCCCHHHHHHHHhh-----cCCCEEEECCcccCcc----ccccCHHHHHHHHhHHHHHHHHHHHH----cC--
Confidence            467789999999998888765     4799999999964321    13456788999999999999988643    22  


Q ss_pred             CCCCCCCceEEEEccccccccc-----------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCC
Q 025124          101 QASSSSGGIIINISATLHYTAT-----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS  169 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~~~-----------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~  169 (257)
                            .++||++||...+...           .+...|+.+|.+.+.+++.++.++    |++++.++|+.+..+....
T Consensus       110 ------~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~ilrp~~v~G~~~~~  179 (330)
T 2c20_A          110 ------VDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQAS----NLRYKIFRYFNVAGATPNG  179 (330)
T ss_dssp             ------CCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHTS----SCEEEEEECSEEECCCTTC
T ss_pred             ------CCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHHHHHHHHHHHh----CCcEEEEecCcccCCCCcC
Confidence                  4689999997654321           235789999999999999998753    7999999999998774211


Q ss_pred             C---------CChHHHHHHhhhh-c---------------cCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          170 K---------LAPEEIRSKATDY-M---------------AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       170 ~---------~~~~~~~~~~~~~-~---------------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      .         ............. .               ....+.+.+|++++++.++........+..+++.+|..+.
T Consensus       180 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s  259 (330)
T 2c20_A          180 IIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFS  259 (330)
T ss_dssp             SSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCBC
T ss_pred             ccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCcc
Confidence            0         0011111111111 0               0113567899999999988643221236788887765443


Q ss_pred             CCCCCcHHHHHHHHHHHhccC
Q 025124          225 NPRDLPKEAVNQLSRAVERKS  245 (257)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~  245 (257)
                           ..++.+.+.+....+.
T Consensus       260 -----~~e~~~~i~~~~g~~~  275 (330)
T 2c20_A          260 -----VKEIVDAVREVTNHEI  275 (330)
T ss_dssp             -----HHHHHHHHHHHTTSCC
T ss_pred             -----HHHHHHHHHHHhCCCC
Confidence                 5677777877776543

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.47  E-value=1.2e-12  Score=111.14  Aligned_cols=193  Identities=16%  Similarity=0.055  Sum_probs=133.1

Q ss_pred             CCeEEEEccCCCH-HHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Q 025124           20 IPAIGLEGDVRKR-EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (257)
Q Consensus        20 ~~~~~~~~Dls~~-~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (257)
                      .++.++.+|++|. +.++.+++       ++|+|||+||.....    ...++++..+++|+.++.++++++.+.     
T Consensus        45 ~~~~~~~~D~~~~~~~~~~~~~-------~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~-----  108 (345)
T 2bll_A           45 PHFHFVEGDISIHSEWIEYHVK-------KCDVVLPLVAIATPI----EYTRNPLRVFELDFEENLRIIRYCVKY-----  108 (345)
T ss_dssp             TTEEEEECCTTTCSHHHHHHHH-------HCSEEEECBCCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHT-----
T ss_pred             CCeEEEeccccCcHHHHHhhcc-------CCCEEEEcccccCcc----chhcCHHHHHHHHHHHHHHHHHHHHHh-----
Confidence            3578899999984 45666554       579999999964321    123456778999999999988887542     


Q ss_pred             CCCCCCCCCceEEEEcccccccccc------------------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           99 RGQASSSSGGIIINISATLHYTATW------------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        99 ~~~~~~~~~g~ii~iss~~~~~~~~------------------~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                              +++||++||...+....                  ....|+.+|.+.+.+++.++.+.    |++++.++|+
T Consensus       109 --------~~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~ilrp~  176 (345)
T 2bll_A          109 --------RKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE----GLQFTLFRPF  176 (345)
T ss_dssp             --------TCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH----CCCEEEEEEC
T ss_pred             --------CCeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHHHHHHHHHHHHHHhc----CCCEEEEcCC
Confidence                    35799999976542211                  12379999999999999998764    5999999999


Q ss_pred             cccCCCCCCCC------C--hHHHHHHhhhhcc---------CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc-c
Q 025124          161 PIKDTAGVSKL------A--PEEIRSKATDYMA---------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN-W  222 (257)
Q Consensus       161 ~v~t~~~~~~~------~--~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~-~  222 (257)
                      .+..+......      .  -..+........+         ...+.+++|+|++++.++........|+.+++.+|. .
T Consensus       177 ~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~~~  256 (345)
T 2bll_A          177 NWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENE  256 (345)
T ss_dssp             SEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSE
T ss_pred             cccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHHhhccccCCCceEEeCCCCCC
Confidence            99887543210      0  0112222111111         123678999999999999765434578899998874 3


Q ss_pred             cCCCCCCcHHHHHHHHHHHhccC
Q 025124          223 LSNPRDLPKEAVNQLSRAVERKS  245 (257)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~  245 (257)
                      +.     ..++.+.+.+....+.
T Consensus       257 ~s-----~~e~~~~i~~~~g~~~  274 (345)
T 2bll_A          257 AS-----IEELGEMLLASFEKHP  274 (345)
T ss_dssp             EE-----HHHHHHHHHHHHHTCT
T ss_pred             CC-----HHHHHHHHHHHhCCCc
Confidence            43     4677777777776654

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.47  E-value=2.3e-12  Score=101.29  Aligned_cols=156  Identities=14%  Similarity=0.109  Sum_probs=110.9

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|++|++++.++++       ++|++||++|.....   +  .      .++|+.++..+++++.+    .+ 
T Consensus        46 ~~~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a~~~~~~---~--~------~~~n~~~~~~~~~~~~~----~~-  102 (206)
T 1hdo_A           46 RPAHVVVGDVLQAADVDKTVA-------GQDAVIVLLGTRNDL---S--P------TTVMSEGARNIVAAMKA----HG-  102 (206)
T ss_dssp             CCSEEEESCTTSHHHHHHHHT-------TCSEEEECCCCTTCC---S--C------CCHHHHHHHHHHHHHHH----HT-
T ss_pred             CceEEEEecCCCHHHHHHHHc-------CCCEEEECccCCCCC---C--c------cchHHHHHHHHHHHHHH----hC-
Confidence            357889999999998887764       589999999965431   1  1      13677887777777654    23 


Q ss_pred             CCCCCCCCceEEEEcccccccccc----cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHH
Q 025124          100 GQASSSSGGIIINISATLHYTATW----YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE  175 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~~~~----~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~  175 (257)
                             .++||++||.......+    ....|+.+|.+++.+++        ..|++++.++||.+........+..  
T Consensus       103 -------~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~~~e~~~~--------~~~i~~~~lrp~~~~~~~~~~~~~~--  165 (206)
T 1hdo_A          103 -------VDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLR--------ESGLKYVAVMPPHIGDQPLTGAYTV--  165 (206)
T ss_dssp             -------CCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHHH--------HTCSEEEEECCSEEECCCCCSCCEE--
T ss_pred             -------CCeEEEEeeeeeccCcccccccchhHHHHHHHHHHHHH--------hCCCCEEEEeCCcccCCCCCcceEe--
Confidence                   46899999987655443    56789999999998874        2479999999999842221111110  


Q ss_pred             HHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          176 IRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                         .. ...+.+.+.+++|+|+++++++..+  ..+|+.+.++||.
T Consensus       166 ---~~-~~~~~~~~i~~~Dva~~~~~~~~~~--~~~g~~~~i~~g~  205 (206)
T 1hdo_A          166 ---TL-DGRGPSRVISKHDLGHFMLRCLTTD--EYDGHSTYPSHQY  205 (206)
T ss_dssp             ---ES-SSCSSCSEEEHHHHHHHHHHTTSCS--TTTTCEEEEECCC
T ss_pred             ---cc-cCCCCCCccCHHHHHHHHHHHhcCc--cccccceeeeccc
Confidence               00 1112146789999999999999764  3689999999884

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.46  E-value=3.9e-12  Score=108.31  Aligned_cols=202  Identities=13%  Similarity=0.057  Sum_probs=140.1

Q ss_pred             HHHHHHHHhcCCC------------eEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHH
Q 025124            9 RSAVAALHSLGIP------------AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVI   76 (257)
Q Consensus         9 ~~~~~~l~~~~~~------------~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~   76 (257)
                      ..+++.|.+.|.+            +.++.+|++|.+++..+++       ++|+|||+|+...      .+.+.++..+
T Consensus        33 ~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vih~A~~~~------~~~~~~~~~~   99 (347)
T 4id9_A           33 RAVVAALRTQGRTVRGFDLRPSGTGGEEVVGSLEDGQALSDAIM-------GVSAVLHLGAFMS------WAPADRDRMF   99 (347)
T ss_dssp             HHHHHHHHHTTCCEEEEESSCCSSCCSEEESCTTCHHHHHHHHT-------TCSEEEECCCCCC------SSGGGHHHHH
T ss_pred             HHHHHHHHhCCCEEEEEeCCCCCCCccEEecCcCCHHHHHHHHh-------CCCEEEECCcccC------cchhhHHHHH
Confidence            3455666655543            4557899999999887765       7999999999643      2445568899


Q ss_pred             HHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccc-------------cccchhhHHHHHHHHHHHHHHH
Q 025124           77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-------------TWYQIHVSAAKAAVDSITRSLA  143 (257)
Q Consensus        77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~-------------~~~~~~Y~~sK~a~~~l~~~la  143 (257)
                      ++|+.++.++++++.+    .+        .++||++||...+..             ......|+.+|.+.+.+++.++
T Consensus       100 ~~nv~~~~~ll~a~~~----~~--------~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~  167 (347)
T 4id9_A          100 AVNVEGTRRLLDAASA----AG--------VRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVRFHQ  167 (347)
T ss_dssp             HHHTHHHHHHHHHHHH----TT--------CSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH----cC--------CCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHH
Confidence            9999999999998754    22        468999999655432             2345689999999999999998


Q ss_pred             HHhcCCCCeEEEEEecCcccC-------------CCCCC-----------CCChHHHHHHhhhhcc---------CCCC-
Q 025124          144 LEWGTDYAIRVNGIAPGPIKD-------------TAGVS-----------KLAPEEIRSKATDYMA---------AYKF-  189 (257)
Q Consensus       144 ~e~~~~~gi~v~~v~Pg~v~t-------------~~~~~-----------~~~~~~~~~~~~~~~~---------~~~~-  189 (257)
                      .+.    |++++.++|+.+.+             |....           ...-..+........+         ...+ 
T Consensus       168 ~~~----~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  243 (347)
T 4id9_A          168 RSG----AMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFR  243 (347)
T ss_dssp             HHS----SSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCE
T ss_pred             Hhc----CCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCc
Confidence            763    69999999999982             21100           0000011111111111         1234 


Q ss_pred             ---CCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHHHHHHhccCC
Q 025124          190 ---GEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKSR  246 (257)
Q Consensus       190 ---~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (257)
                         .+++|+|++++.++....  ..|+.+++.+|..+.     ..++...+.+..+.+..
T Consensus       244 ~~~i~v~Dva~ai~~~~~~~~--~~~~~~ni~~~~~~s-----~~e~~~~i~~~~g~~~~  296 (347)
T 4id9_A          244 MHITDTRDMVAGILLALDHPE--AAGGTFNLGADEPAD-----FAALLPKIAALTGLPIV  296 (347)
T ss_dssp             ECEEEHHHHHHHHHHHHHCGG--GTTEEEEESCSSCEE-----HHHHHHHHHHHHCCCEE
T ss_pred             cCcEeHHHHHHHHHHHhcCcc--cCCCeEEECCCCccc-----HHHHHHHHHHHhCCCCc
Confidence               778999999999997643  348899998886554     57788888888876544

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.46  E-value=1.4e-12  Score=107.28  Aligned_cols=175  Identities=14%  Similarity=0.044  Sum_probs=120.6

Q ss_pred             EEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCC
Q 025124           25 LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASS  104 (257)
Q Consensus        25 ~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~  104 (257)
                      +.+|++|+++++++++.+     ++|+||||||....    +.+.++++..+++|+.++..+++++.+    .       
T Consensus        39 ~~~Dl~~~~~~~~~~~~~-----~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~-------   98 (273)
T 2ggs_A           39 YKLDLTDFPRLEDFIIKK-----RPDVIINAAAMTDV----DKCEIEKEKAYKINAEAVRHIVRAGKV----I-------   98 (273)
T ss_dssp             EECCTTSHHHHHHHHHHH-----CCSEEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHH----T-------
T ss_pred             ceeccCCHHHHHHHHHhc-----CCCEEEECCcccCh----hhhhhCHHHHHHHhHHHHHHHHHHHHH----h-------
Confidence            569999999999888765     79999999996432    123567889999999999999999864    2       


Q ss_pred             CCCceEEEEcccccccccc----------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChH
Q 025124          105 SSGGIIINISATLHYTATW----------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE  174 (257)
Q Consensus       105 ~~~g~ii~iss~~~~~~~~----------~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~  174 (257)
                        +++||++||...+.+..          +...|+.+|.+++.+++.    +. -     ..++|+.+..+   .. ...
T Consensus        99 --~~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~----~~-~-----~~iR~~~v~G~---~~-~~~  162 (273)
T 2ggs_A           99 --DSYIVHISTDYVFDGEKGNYKEEDIPNPINYYGLSKLLGETFALQ----DD-S-----LIIRTSGIFRN---KG-FPI  162 (273)
T ss_dssp             --TCEEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHHHHHHHHHHHCC----TT-C-----EEEEECCCBSS---SS-HHH
T ss_pred             --CCeEEEEecceeEcCCCCCcCCCCCCCCCCHHHHHHHHHHHHHhC----CC-e-----EEEeccccccc---cH-HHH
Confidence              35899999988765432          256899999999999887    22 2     34455555421   01 111


Q ss_pred             HHHHHhhhhcc------CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHHHHHHhccC
Q 025124          175 EIRSKATDYMA------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKS  245 (257)
Q Consensus       175 ~~~~~~~~~~~------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~~~~~~~  245 (257)
                      ..........+      ...+.+++|+|+++++++....   +| .+++++ ..+.     ..++...+.+....+.
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~~~---~g-~~~i~~-~~~s-----~~e~~~~~~~~~g~~~  229 (273)
T 2ggs_A          163 YVYKTLKEGKTVFAFKGYYSPISARKLASAILELLELRK---TG-IIHVAG-ERIS-----RFELALKIKEKFNLPG  229 (273)
T ss_dssp             HHHHHHHTTCCEEEESCEECCCBHHHHHHHHHHHHHHTC---CE-EEECCC-CCEE-----HHHHHHHHHHHTTCCS
T ss_pred             HHHHHHHcCCCEEeecCCCCceEHHHHHHHHHHHHhcCc---CC-eEEECC-Cccc-----HHHHHHHHHHHhCCCh
Confidence            11111111111      3457899999999999997542   34 777776 4443     5677777887777654

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.46  E-value=7.1e-13  Score=108.93  Aligned_cols=140  Identities=9%  Similarity=0.017  Sum_probs=107.9

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      ++.++.+|++|.+++..+++       ++|+|||+||..        ..+.++..+++|+.++.++++++.+    .+  
T Consensus        43 ~~~~~~~Dl~d~~~~~~~~~-------~~d~vi~~a~~~--------~~~~~~~~~~~n~~~~~~l~~a~~~----~~--  101 (267)
T 3ay3_A           43 HEEIVACDLADAQAVHDLVK-------DCDGIIHLGGVS--------VERPWNDILQANIIGAYNLYEAARN----LG--  101 (267)
T ss_dssp             TEEECCCCTTCHHHHHHHHT-------TCSEEEECCSCC--------SCCCHHHHHHHTHHHHHHHHHHHHH----TT--
T ss_pred             CccEEEccCCCHHHHHHHHc-------CCCEEEECCcCC--------CCCCHHHHHHHHHHHHHHHHHHHHH----hC--
Confidence            46788999999998887765       589999999965        1234678999999999999998864    22  


Q ss_pred             CCCCCCCceEEEEcccccccccc------------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccc-CCCC
Q 025124          101 QASSSSGGIIINISATLHYTATW------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK-DTAG  167 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~~~~------------~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~-t~~~  167 (257)
                            .++||++||...+.+.+            +...|+.+|.+++.+++.++.    ..|++++.++||.+. ++. 
T Consensus       102 ------~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~----~~gi~~~~lrp~~v~~~~~-  170 (267)
T 3ay3_A          102 ------KPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYH----KFDIETLNIRIGSCFPKPK-  170 (267)
T ss_dssp             ------CCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHH----TTCCCEEEEEECBCSSSCC-
T ss_pred             ------CCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHH----HcCCCEEEEeceeecCCCC-
Confidence                  47899999987654332            347899999999999998864    457999999999985 221 


Q ss_pred             CCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCC
Q 025124          168 VSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (257)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  206 (257)
                           ...         ....+.+++|+|+.++.++...
T Consensus       171 -----~~~---------~~~~~~~~~dva~~~~~~~~~~  195 (267)
T 3ay3_A          171 -----DAR---------MMATWLSVDDFMRLMKRAFVAP  195 (267)
T ss_dssp             -----SHH---------HHHHBCCHHHHHHHHHHHHHSS
T ss_pred             -----CCC---------eeeccccHHHHHHHHHHHHhCC
Confidence                 111         1123679999999999999754

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.44  E-value=4e-12  Score=107.83  Aligned_cols=197  Identities=15%  Similarity=0.031  Sum_probs=129.6

Q ss_pred             CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Q 025124           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (257)
Q Consensus        19 ~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (257)
                      +.++.++.+|++|.++++++++..     ++|+|||+||.....    ...++.+..+++|+.+++.+++++..    .+
T Consensus        49 ~~~~~~~~~Dl~~~~~~~~~~~~~-----~~D~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~  115 (338)
T 1udb_A           49 GKHPTFVEGDIRNEALMTEILHDH-----AIDTVIHFAGLKAVG----ESVQKPLEYYDNNVNGTLRLISAMRA----AN  115 (338)
T ss_dssp             TSCCEEEECCTTCHHHHHHHHHHT-----TCSEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHH----HT
T ss_pred             CCcceEEEccCCCHHHHHHHhhcc-----CCCEEEECCccCccc----cchhcHHHHHHHHHHHHHHHHHHHHh----cC
Confidence            456788999999999988887642     699999999964321    12345567899999999999886533    33


Q ss_pred             CCCCCCCCCceEEEEcccccccc-----------c-ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCC
Q 025124           99 RGQASSSSGGIIINISATLHYTA-----------T-WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA  166 (257)
Q Consensus        99 ~~~~~~~~~g~ii~iss~~~~~~-----------~-~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~  166 (257)
                              .++||++||...+..           . +....|+.+|.+++.+++.++.+.   .|+++..++|+.+..+.
T Consensus       116 --------~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~ilR~~~v~G~~  184 (338)
T 1udb_A          116 --------VKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQ---PDWSIALLRYFNPVGAH  184 (338)
T ss_dssp             --------CCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHS---TTCEEEEEEECEEECCC
T ss_pred             --------CCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHHHHHHHHHHhc---CCCceEEEeeceecCCC
Confidence                    478999999765421           1 235689999999999999999874   26899999987776441


Q ss_pred             C---C--C--C-CC--hHHHHHHhh-hhc---------------cCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCC
Q 025124          167 G---V--S--K-LA--PEEIRSKAT-DYM---------------AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG  220 (257)
Q Consensus       167 ~---~--~--~-~~--~~~~~~~~~-~~~---------------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg  220 (257)
                      .   .  .  . ..  ......... ...               ....+.+++|+|++++.++........+..+++.+|
T Consensus       185 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~  264 (338)
T 1udb_A          185 PSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAG  264 (338)
T ss_dssp             TTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCS
T ss_pred             cccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCC
Confidence            1   0  0  0 00  111111111 000               111356789999999888853211122367888776


Q ss_pred             cccCCCCCCcHHHHHHHHHHHhcc
Q 025124          221 NWLSNPRDLPKEAVNQLSRAVERK  244 (257)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~  244 (257)
                      ..+.     ..++.+.+.+....+
T Consensus       265 ~~~s-----~~e~~~~i~~~~g~~  283 (338)
T 1udb_A          265 VGNS-----VLDVVNAFSKACGKP  283 (338)
T ss_dssp             CCEE-----HHHHHHHHHHHHTSC
T ss_pred             Ccee-----HHHHHHHHHHHhCCC
Confidence            5433     466777777777654

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.43  E-value=6.4e-12  Score=106.38  Aligned_cols=192  Identities=13%  Similarity=0.011  Sum_probs=132.8

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|++|.+++..+++.+     ++|+|||+||.....    ...++++..+++|+.++.++++++.+.    +.
T Consensus        63 ~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~  129 (335)
T 1rpn_A           63 GDIQYEDGDMADACSVQRAVIKA-----QPQEVYNLAAQSFVG----ASWNQPVTTGVVDGLGVTHLLEAIRQF----SP  129 (335)
T ss_dssp             GGEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCCHH----HHTTSHHHHHHHHTHHHHHHHHHHHHH----CT
T ss_pred             CceEEEECCCCCHHHHHHHHHHc-----CCCEEEECccccchh----hhhhChHHHHHHHHHHHHHHHHHHHHh----CC
Confidence            35788999999999999888765     799999999964321    112356789999999999999988654    10


Q ss_pred             CCCCCCCCceEEEEcccccccccc-----------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCC
Q 025124          100 GQASSSSGGIIINISATLHYTATW-----------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  168 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~~~~-----------~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~  168 (257)
                             .++||++||...+.+..           +...|+.+|.+.+.+++.++.++    ++++..++|+.+..|...
T Consensus       130 -------~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~----~~~~~i~r~~~v~Gp~~~  198 (335)
T 1rpn_A          130 -------ETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESF----GLHASSGILFNHESPLRG  198 (335)
T ss_dssp             -------TSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECCEECTTSC
T ss_pred             -------CCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHHHHHHHHHHHHHHc----CCcEEEEeeCcccCCCCC
Confidence                   26899999976543321           24579999999999999998765    478888999888876433


Q ss_pred             CCCChH---HHHHHhhhhc-c---------CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHH
Q 025124          169 SKLAPE---EIRSKATDYM-A---------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVN  235 (257)
Q Consensus       169 ~~~~~~---~~~~~~~~~~-~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~  235 (257)
                      ......   .......... +         ...+.+.+|+|++++.++....    +..+++.+|..+.     ..++.+
T Consensus       199 ~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~----~~~~ni~~~~~~s-----~~e~~~  269 (335)
T 1rpn_A          199 IEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK----ADDYVVATGVTTT-----VRDMCQ  269 (335)
T ss_dssp             TTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS----CCCEEECCSCEEE-----HHHHHH
T ss_pred             CCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHhcCC----CCEEEEeCCCCcc-----HHHHHH
Confidence            222111   1111111111 1         1135678999999999997542    3677887765443     566777


Q ss_pred             HHHHHHhcc
Q 025124          236 QLSRAVERK  244 (257)
Q Consensus       236 ~~~~~~~~~  244 (257)
                      .+.+....+
T Consensus       270 ~i~~~~g~~  278 (335)
T 1rpn_A          270 IAFEHVGLD  278 (335)
T ss_dssp             HHHHTTTCC
T ss_pred             HHHHHhCCC
Confidence            777777654

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.42  E-value=9.4e-13  Score=110.19  Aligned_cols=186  Identities=11%  Similarity=0.043  Sum_probs=119.1

Q ss_pred             EEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCC
Q 025124           25 LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASS  104 (257)
Q Consensus        25 ~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~  104 (257)
                      +.+|+++.+.++.+++...  ++++|+|||+||....      ..++++..+++|+.++.++++++.+.    +      
T Consensus        47 ~~~d~~~~~~~~~~~~~~~--~~~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~a~~~~----~------  108 (310)
T 1eq2_A           47 IADYMDKEDFLIQIMAGEE--FGDVEAIFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLER----E------  108 (310)
T ss_dssp             CSEEEEHHHHHHHHHTTCC--CSSCCEEEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHHH----T------
T ss_pred             eccccccHHHHHHHHhccc--cCCCcEEEECcccccC------cccCHHHHHHHHHHHHHHHHHHHHHc----C------
Confidence            3466766666655543100  1269999999996543      23346778999999999999988653    2      


Q ss_pred             CCCceEEEEcccccccccc-----------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCC---
Q 025124          105 SSGGIIINISATLHYTATW-----------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---  170 (257)
Q Consensus       105 ~~~g~ii~iss~~~~~~~~-----------~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~---  170 (257)
                        . ++|++||...+....           +...|+.+|.+.+.+++.++.+    .|++++.++||.+.++.....   
T Consensus       109 --~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~----~g~~~~~lrp~~v~G~~~~~~~~~  181 (310)
T 1eq2_A          109 --I-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPE----ANSQIVGFRYFNVYGPREGHKGSM  181 (310)
T ss_dssp             --C-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGGG----CSSCEEEEEECEEESSSCGGGGGG
T ss_pred             --C-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH----cCCCEEEEeCCcEECcCCCCCCcc
Confidence              3 699999986543221           2457999999999999988754    479999999999998754210   


Q ss_pred             -CChHHHHHHhh---------hhcc-CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHHHH
Q 025124          171 -LAPEEIRSKAT---------DYMA-AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSR  239 (257)
Q Consensus       171 -~~~~~~~~~~~---------~~~~-~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~  239 (257)
                       ..-..+.....         .... ...+.+.+|+|++++.++....    |+.+++.+|..+.     ..++.+.+.+
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s-----~~e~~~~i~~  252 (310)
T 1eq2_A          182 ASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV----SGIFNLGTGRAES-----FQAVADATLA  252 (310)
T ss_dssp             SCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC----CEEEEESCSCCBC-----HHHHHHHC--
T ss_pred             chHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcCC----CCeEEEeCCCccC-----HHHHHHHHHH
Confidence             00011111111         1112 2345779999999999997543    7789998875443     4566666666


Q ss_pred             HHhcc
Q 025124          240 AVERK  244 (257)
Q Consensus       240 ~~~~~  244 (257)
                      ....+
T Consensus       253 ~~g~~  257 (310)
T 1eq2_A          253 YHKKG  257 (310)
T ss_dssp             -----
T ss_pred             HcCCC
Confidence            66554

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.42  E-value=7.7e-13  Score=105.94  Aligned_cols=166  Identities=10%  Similarity=-0.056  Sum_probs=116.3

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|++|.+++.++++       ++|+|||++|.....          ...+++|+.++..+++++.+    .+ 
T Consensus        46 ~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi~~a~~~~~~----------~~~~~~n~~~~~~l~~~~~~----~~-  103 (227)
T 3dhn_A           46 EHLKVKKADVSSLDEVCEVCK-------GADAVISAFNPGWNN----------PDIYDETIKVYLTIIDGVKK----AG-  103 (227)
T ss_dssp             TTEEEECCCTTCHHHHHHHHT-------TCSEEEECCCC----------------CCSHHHHHHHHHHHHHHH----TT-
T ss_pred             CceEEEEecCCCHHHHHHHhc-------CCCEEEEeCcCCCCC----------hhHHHHHHHHHHHHHHHHHH----hC-
Confidence            457888999999999888775       689999999854211          12678899998888887644    22 


Q ss_pred             CCCCCCCCceEEEEcccccccccc----------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCC
Q 025124          100 GQASSSSGGIIINISATLHYTATW----------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS  169 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~~~~----------~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~  169 (257)
                             .++||++||.+...+.+          ....|+.+|.+.+.+.+.++.    ..|++++.++||.+.++....
T Consensus       104 -------~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~----~~~~~~~ilrp~~v~g~~~~~  172 (227)
T 3dhn_A          104 -------VNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMK----EKEIDWVFFSPAADMRPGVRT  172 (227)
T ss_dssp             -------CSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHHHHHHHHHHHHTGGG----CCSSEEEEEECCSEEESCCCC
T ss_pred             -------CCEEEEeCChhhccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhh----ccCccEEEEeCCcccCCCccc
Confidence                   46899999987665432          357899999999999888875    347999999999998775432


Q ss_pred             CCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          170 KLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                      .............. ....+.+++|+|++++.++..+.  ..|+.+.+.+..
T Consensus       173 ~~~~~~~~~~~~~~-~~~~~i~~~Dva~ai~~~l~~~~--~~g~~~~~~~~~  221 (227)
T 3dhn_A          173 GRYRLGKDDMIVDI-VGNSHISVEDYAAAMIDELEHPK--HHQERFTIGYLE  221 (227)
T ss_dssp             CCCEEESSBCCCCT-TSCCEEEHHHHHHHHHHHHHSCC--CCSEEEEEECCS
T ss_pred             cceeecCCCcccCC-CCCcEEeHHHHHHHHHHHHhCcc--ccCcEEEEEeeh
Confidence            22110000000000 01235789999999999997653  568999888753

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.42  E-value=7.2e-12  Score=105.12  Aligned_cols=186  Identities=15%  Similarity=0.092  Sum_probs=131.7

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      ++.++.+|++ .+++.++++       ++|+|||+|+.....        +.+..+++|+.++.++++++..    .+  
T Consensus        43 ~~~~~~~Dl~-~~~~~~~~~-------~~d~Vih~a~~~~~~--------~~~~~~~~n~~~~~~ll~a~~~----~~--  100 (311)
T 3m2p_A           43 DYEYRVSDYT-LEDLINQLN-------DVDAVVHLAATRGSQ--------GKISEFHDNEILTQNLYDACYE----NN--  100 (311)
T ss_dssp             CCEEEECCCC-HHHHHHHTT-------TCSEEEECCCCCCSS--------SCGGGTHHHHHHHHHHHHHHHH----TT--
T ss_pred             ceEEEEcccc-HHHHHHhhc-------CCCEEEEccccCCCC--------ChHHHHHHHHHHHHHHHHHHHH----cC--
Confidence            4567789999 887777664       799999999965443        2345788999999988888753    22  


Q ss_pred             CCCCCCCceEEEEccccccccc-----------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCC
Q 025124          101 QASSSSGGIIINISATLHYTAT-----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS  169 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~~~-----------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~  169 (257)
                            -++||++||...+...           .+...|+.+|.+.+.+++.++.+    .|++++.++|+.+..+....
T Consensus       101 ------~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~g~~~~ilRp~~v~G~~~~~  170 (311)
T 3m2p_A          101 ------ISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRK----KGLCIKNLRFAHLYGFNEKN  170 (311)
T ss_dssp             ------CCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHH----SCCEEEEEEECEEECSCC--
T ss_pred             ------CCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH----cCCCEEEEeeCceeCcCCCC
Confidence                  4679999996654322           13468999999999999998875    36999999999999875432


Q ss_pred             CCChHHHHHHhhhhcc---------CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHHHHH
Q 025124          170 KLAPEEIRSKATDYMA---------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRA  240 (257)
Q Consensus       170 ~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~~  240 (257)
                      ......+........+         ...+.+.+|+|++++.++....   .|+.+++.+|..+.     ..++...+.+.
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~---~~~~~~i~~~~~~s-----~~e~~~~i~~~  242 (311)
T 3m2p_A          171 NYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEK---VSGTFNIGSGDALT-----NYEVANTINNA  242 (311)
T ss_dssp             CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTT---CCEEEEECCSCEEC-----HHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCC---CCCeEEeCCCCccc-----HHHHHHHHHHH
Confidence            2111222222222211         1135678999999999997653   68899998876554     57778888888


Q ss_pred             HhccCC
Q 025124          241 VERKSR  246 (257)
Q Consensus       241 ~~~~~~  246 (257)
                      ...+..
T Consensus       243 ~g~~~~  248 (311)
T 3m2p_A          243 FGNKDN  248 (311)
T ss_dssp             TTCTTC
T ss_pred             hCCCCc
Confidence            776653

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.41  E-value=1.8e-12  Score=110.02  Aligned_cols=184  Identities=13%  Similarity=0.033  Sum_probs=122.3

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      ++.++.+|++|.++++.+++       ++|+|||+|+...   +..  .+..+..+++|+.+++++++++.+..   .  
T Consensus        57 ~~~~~~~Dl~d~~~~~~~~~-------~~d~Vih~A~~~~---~~~--~~~~~~~~~~nv~gt~~ll~a~~~~~---~--  119 (337)
T 2c29_D           57 HLTLWKADLADEGSFDEAIK-------GCTGVFHVATPMD---FES--KDPENEVIKPTIEGMLGIMKSCAAAK---T--  119 (337)
T ss_dssp             HEEEEECCTTSTTTTHHHHT-------TCSEEEECCCCCC---SSC--SSHHHHTHHHHHHHHHHHHHHHHHHS---C--
T ss_pred             eEEEEEcCCCCHHHHHHHHc-------CCCEEEEeccccC---CCC--CChHHHHHHHHHHHHHHHHHHHHhCC---C--
Confidence            57889999999988877764       5899999998541   111  22335688999999999999987642   1  


Q ss_pred             CCCCCCCceEEEEcccccccccc----------------------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124          101 QASSSSGGIIINISATLHYTATW----------------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~~~~----------------------~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                            .++||++||..+..+.+                      ....|+.+|.+.+.+++.++.+.    |++++.++
T Consensus       120 ------~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~~lr  189 (337)
T 2c29_D          120 ------VRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKEN----NIDFITII  189 (337)
T ss_dssp             ------CCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHH----TCCEEEEE
T ss_pred             ------ccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHHc----CCcEEEEe
Confidence                  36799999987544321                      22369999999999988877543    69999999


Q ss_pred             cCcccCCCCCCCCChHHHHHH---h------hhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCC
Q 025124          159 PGPIKDTAGVSKLAPEEIRSK---A------TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDL  229 (257)
Q Consensus       159 Pg~v~t~~~~~~~~~~~~~~~---~------~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~  229 (257)
                      |+.+.+|........ .....   .      ....+..++.+++|+++++++++...  ...|. +...++. ..     
T Consensus       190 p~~v~Gp~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~--~~~~~-~~~~~~~-~s-----  259 (337)
T 2c29_D          190 PTLVVGPFIMSSMPP-SLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHIYLFENP--KAEGR-YICSSHD-CI-----  259 (337)
T ss_dssp             ECEEESCCSCSSCCH-HHHHHTHHHHTCGGGHHHHTEEEEEEHHHHHHHHHHHHHCT--TCCEE-EEECCEE-EE-----
T ss_pred             CCceECCCCCCCCCc-hHHHHHHHHcCCCccccccCCCCEEEHHHHHHHHHHHhcCc--ccCce-EEEeCCC-CC-----
Confidence            999998865433221 11110   0      00112234789999999999999643  23444 4433321 11     


Q ss_pred             cHHHHHHHHHHH
Q 025124          230 PKEAVNQLSRAV  241 (257)
Q Consensus       230 ~~~~~~~~~~~~  241 (257)
                      ..++.+.|.+..
T Consensus       260 ~~e~~~~i~~~~  271 (337)
T 2c29_D          260 ILDLAKMLREKY  271 (337)
T ss_dssp             HHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHC
Confidence            345555565544

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.41  E-value=8.7e-12  Score=104.92  Aligned_cols=208  Identities=13%  Similarity=0.028  Sum_probs=140.7

Q ss_pred             HHHHHHHHhcCCCeEEE----EccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHH
Q 025124            9 RSAVAALHSLGIPAIGL----EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF   84 (257)
Q Consensus         9 ~~~~~~l~~~~~~~~~~----~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~   84 (257)
                      ..+++.|.+.|.++..+    .+|++|.+++..+++..     ++|+|||+|+.....   ....++.+..+++|+.++.
T Consensus        17 ~~l~~~L~~~g~~v~~~~r~~~~D~~d~~~~~~~~~~~-----~~d~vih~a~~~~~~---~~~~~~~~~~~~~n~~~~~   88 (321)
T 1e6u_A           17 SAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASE-----RIDQVYLAAAKVGGI---VANNTYPADFIYQNMMIES   88 (321)
T ss_dssp             HHHHHHHTTCTTEEEECCCTTTCCTTCHHHHHHHHHHH-----CCSEEEECCCCCCCH---HHHHHCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCeEEEEecCccCCccCHHHHHHHHHhc-----CCCEEEEcCeecCCc---chhhhCHHHHHHHHHHHHH
Confidence            45666676666555443    37999999988887754     799999999964311   1124456778999999999


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccc----------------cccchhhHHHHHHHHHHHHHHHHHhcC
Q 025124           85 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA----------------TWYQIHVSAAKAAVDSITRSLALEWGT  148 (257)
Q Consensus        85 ~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~----------------~~~~~~Y~~sK~a~~~l~~~la~e~~~  148 (257)
                      ++++++.+    .+        -+++|++||...+.+                .+....|+.+|.+.+.+++.++.++  
T Consensus        89 ~l~~~~~~----~~--------~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~--  154 (321)
T 1e6u_A           89 NIIHAAHQ----ND--------VNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY--  154 (321)
T ss_dssp             HHHHHHHH----TT--------CCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH--
T ss_pred             HHHHHHHH----hC--------CCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHh--
Confidence            99988754    22        458999999865421                1123589999999999999998764  


Q ss_pred             CCCeEEEEEecCcccCCCCCCCC----ChHHHHHHhhh-------hc-------cCCCCCCHHhHHHHHHHhccCCCCc-
Q 025124          149 DYAIRVNGIAPGPIKDTAGVSKL----APEEIRSKATD-------YM-------AAYKFGEKWDIAMAALYLASDAGKY-  209 (257)
Q Consensus       149 ~~gi~v~~v~Pg~v~t~~~~~~~----~~~~~~~~~~~-------~~-------~~~~~~~~~dva~~~~~l~~~~~~~-  209 (257)
                        |++++.++|+.+..+......    .-..+......       ..       ....+.+.+|+|++++.++...... 
T Consensus       155 --~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~~~~~~~~~~  232 (321)
T 1e6u_A          155 --GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVW  232 (321)
T ss_dssp             --CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHH
T ss_pred             --CCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHHHHhCccccc
Confidence              699999999999987543211    01122222211       11       1113568999999999999653221 


Q ss_pred             -----ccCcEEEecCCcccCCCCCCcHHHHHHHHHHHhccC
Q 025124          210 -----VNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKS  245 (257)
Q Consensus       210 -----~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~~~~~~~  245 (257)
                           ..|+.+++.+|..+.     ..++...+.+....+.
T Consensus       233 ~~~~~~~~~~~ni~~~~~~s-----~~e~~~~i~~~~g~~~  268 (321)
T 1e6u_A          233 LENTQPMLSHINVGTGVDCT-----IRELAQTIAKVVGYKG  268 (321)
T ss_dssp             HHTSBTTBCCEEESCSCCEE-----HHHHHHHHHHHHTCCS
T ss_pred             ccccccCCceEEeCCCCCcc-----HHHHHHHHHHHhCCCC
Confidence                 136788887765443     5677888888777653

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.41  E-value=2.4e-12  Score=107.69  Aligned_cols=207  Identities=13%  Similarity=0.055  Sum_probs=138.4

Q ss_pred             HHHHHHHHhcCC-------CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            9 RSAVAALHSLGI-------PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         9 ~~~~~~l~~~~~-------~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      ..+++.|.+.|.       .+.++.+|++|.+++.++++..     ++|+|||+|+.....   ....++.+..+++|+.
T Consensus        20 ~~l~~~L~~~g~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~-----~~d~Vih~A~~~~~~---~~~~~~~~~~~~~nv~   91 (319)
T 4b8w_A           20 KAIQKVVADGAGLPGEDWVFVSSKDADLTDTAQTRALFEKV-----QPTHVIHLAAMVGGL---FRNIKYNLDFWRKNVH   91 (319)
T ss_dssp             HHHHHHHHTTTCCTTCEEEECCTTTCCTTSHHHHHHHHHHS-----CCSEEEECCCCCCCH---HHHTTCHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCcccccccccCceecccCCHHHHHHHHhhc-----CCCEEEECceecccc---cccccCHHHHHHHHHH
Confidence            345666666542       1233478999999998888753     699999999964311   1122345678999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccc----------------cccchhhHHHHHHHHHHHHHHHHH
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA----------------TWYQIHVSAAKAAVDSITRSLALE  145 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~----------------~~~~~~Y~~sK~a~~~l~~~la~e  145 (257)
                      ++.++++++...    +        -++||++||...+..                .+....|+.+|.+.+.+++.++.+
T Consensus        92 gt~~ll~a~~~~----~--------~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~  159 (319)
T 4b8w_A           92 MNDNVLHSAFEV----G--------ARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQ  159 (319)
T ss_dssp             HHHHHHHHHHHT----T--------CSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHc----C--------CCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHHHHHHHHHHHHHHHh
Confidence            999998887432    2        357999999865421                112235999999999999999876


Q ss_pred             hcCCCCeEEEEEecCcccCCCCCCCCC----hHHHHHH----hhhhccC---------CCCCCHHhHHHHHHHhccCCCC
Q 025124          146 WGTDYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSK----ATDYMAA---------YKFGEKWDIAMAALYLASDAGK  208 (257)
Q Consensus       146 ~~~~~gi~v~~v~Pg~v~t~~~~~~~~----~~~~~~~----~~~~~~~---------~~~~~~~dva~~~~~l~~~~~~  208 (257)
                      .    |++++.++|+.+..|.......    -..+...    .....+.         ..+.+++|+|++++.++.....
T Consensus       160 ~----~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~  235 (319)
T 4b8w_A          160 Y----GCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLREYNE  235 (319)
T ss_dssp             H----CCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHHHHHHCCC
T ss_pred             h----CCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHHHHhcccc
Confidence            4    5999999999999875432111    1112222    1122111         1346899999999999975322


Q ss_pred             cccCcEEEecCCcccCCCCCCcHHHHHHHHHHHhccC
Q 025124          209 YVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKS  245 (257)
Q Consensus       209 ~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~~~~~~~  245 (257)
                       ..|..+++.+|..+.     ..++.+.+.+..+.+.
T Consensus       236 -~~~~~~ni~~~~~~s-----~~e~~~~i~~~~g~~~  266 (319)
T 4b8w_A          236 -VEPIILSVGEEDEVS-----IKEAAEAVVEAMDFHG  266 (319)
T ss_dssp             -SSCEEECCCGGGCEE-----HHHHHHHHHHHTTCCS
T ss_pred             -CCceEEEecCCCcee-----HHHHHHHHHHHhCCCC
Confidence             456788887765544     5677888888777554

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.41  E-value=6e-12  Score=106.91  Aligned_cols=197  Identities=15%  Similarity=0.032  Sum_probs=126.9

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      ++.++.+|++|.++++.+++      +++|+|||+||....     .+.++++..+++|+.++.++++++.+...+.+. 
T Consensus        65 ~~~~~~~Dl~d~~~~~~~~~------~~~d~vih~A~~~~~-----~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~-  132 (342)
T 2hrz_A           65 AVDARAADLSAPGEAEKLVE------ARPDVIFHLAAIVSG-----EAELDFDKGYRINLDGTRYLFDAIRIANGKDGY-  132 (342)
T ss_dssp             EEEEEECCTTSTTHHHHHHH------TCCSEEEECCCCCHH-----HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCC-
T ss_pred             ceeEEEcCCCCHHHHHHHHh------cCCCEEEECCccCcc-----cccccHHHHHHHHHHHHHHHHHHHHhcccccCC-
Confidence            46788999999999887775      479999999996431     245678899999999999999998875433210 


Q ss_pred             CCCCCCCceEEEEccccccccc-c----------cchhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEe--cCcccCCC
Q 025124          101 QASSSSGGIIINISATLHYTAT-W----------YQIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIA--PGPIKDTA  166 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~~~-~----------~~~~Y~~sK~a~~~l~~~la~e~~-~~~gi~v~~v~--Pg~v~t~~  166 (257)
                            .++||++||...+.+. +          +...|+.+|.+.+.+++.++.+.. ....+|+..+.  ||...++.
T Consensus       133 ------~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~  206 (342)
T 2hrz_A          133 ------KPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAA  206 (342)
T ss_dssp             ------CCEEEEEEEGGGCCSSCCSSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSG
T ss_pred             ------CcEEEEeCchHhhCCCCCCCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchh
Confidence                  3689999998765432 1          467899999999999999887632 01234555554  66543321


Q ss_pred             CCCCCChHHHHHHhhhhc----cCC-----CCCCHHhHHHHHHHhccCCCCc-ccCcEEEecCCcccCCCCCCcHHHHHH
Q 025124          167 GVSKLAPEEIRSKATDYM----AAY-----KFGEKWDIAMAALYLASDAGKY-VNGNTLIVDGGNWLSNPRDLPKEAVNQ  236 (257)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~----~~~-----~~~~~~dva~~~~~l~~~~~~~-~~G~~~~~dgg~~~~~~~~~~~~~~~~  236 (257)
                      .  .+ ............    +.+     .+.+++|++++++.++...... ..+..+++. |..+.     ..++...
T Consensus       207 ~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~-g~~~s-----~~e~~~~  277 (342)
T 2hrz_A          207 S--GF-FSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMP-GLSAT-----VGEQIEA  277 (342)
T ss_dssp             G--GH-HHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECC-CEEEE-----HHHHHHH
T ss_pred             H--HH-HHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHHHHHHhccccccCCccEEEcC-CCCCC-----HHHHHHH
Confidence            0  00 011111111111    111     1457999999999998643210 135677774 43322     4566777


Q ss_pred             HHHHHhcc
Q 025124          237 LSRAVERK  244 (257)
Q Consensus       237 ~~~~~~~~  244 (257)
                      |.+....+
T Consensus       278 i~~~~g~~  285 (342)
T 2hrz_A          278 LRKVAGEK  285 (342)
T ss_dssp             HHHHHCHH
T ss_pred             HHHHcCcc
Confidence            76666554

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.41  E-value=4.3e-12  Score=109.10  Aligned_cols=193  Identities=15%  Similarity=0.088  Sum_probs=136.8

Q ss_pred             CCeEEEEccCC-CHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Q 025124           20 IPAIGLEGDVR-KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (257)
Q Consensus        20 ~~~~~~~~Dls-~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (257)
                      .++.++.+|++ |.+.+..+++       ++|+|||+|+.....    ...++.+..+++|+.++.++++++...     
T Consensus        69 ~~v~~~~~Dl~~d~~~~~~~~~-------~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~-----  132 (372)
T 3slg_A           69 ERMHFFEGDITINKEWVEYHVK-------KCDVILPLVAIATPA----TYVKQPLRVFELDFEANLPIVRSAVKY-----  132 (372)
T ss_dssp             TTEEEEECCTTTCHHHHHHHHH-------HCSEEEECBCCCCHH----HHHHCHHHHHHHHTTTTHHHHHHHHHH-----
T ss_pred             CCeEEEeCccCCCHHHHHHHhc-------cCCEEEEcCccccHH----HHhhCHHHHHHHHHHHHHHHHHHHHHh-----
Confidence            46888999999 9999888876       589999999965431    123455678899999999998887654     


Q ss_pred             CCCCCCCCCceEEEEccccccccc------------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           99 RGQASSSSGGIIINISATLHYTAT------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        99 ~~~~~~~~~g~ii~iss~~~~~~~------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                              ++++|++||...+...                  .+...|+.+|.+.+.+++.++.    . |++++.++|+
T Consensus       133 --------~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~----~-g~~~~ilRp~  199 (372)
T 3slg_A          133 --------GKHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGM----E-GLNFTLFRPF  199 (372)
T ss_dssp             --------TCEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHT----T-TCEEEEEEEC
T ss_pred             --------CCcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHHHHHHHHHHHHHHH----C-CCCEEEEccc
Confidence                    2469999996543221                  2233799999999999998874    3 7999999999


Q ss_pred             cccCCCCCCCCC--------hHHHHHHhhhhc---------cCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecC-Ccc
Q 025124          161 PIKDTAGVSKLA--------PEEIRSKATDYM---------AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDG-GNW  222 (257)
Q Consensus       161 ~v~t~~~~~~~~--------~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dg-g~~  222 (257)
                      .+..+.......        -..+........         ....+.+.+|+|++++.++........|+.+++.+ |..
T Consensus       200 ~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~  279 (372)
T 3slg_A          200 NWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNN  279 (372)
T ss_dssp             SEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCE
T ss_pred             cccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCC
Confidence            999875432110        112222222221         11246789999999999998654445789999988 455


Q ss_pred             cCCCCCCcHHHHHHHHHHHhccCC
Q 025124          223 LSNPRDLPKEAVNQLSRAVERKSR  246 (257)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~  246 (257)
                      +.     ..++...|.+..+++..
T Consensus       280 ~s-----~~e~~~~i~~~~g~~~~  298 (372)
T 3slg_A          280 FS-----VRELANKMLELAAEFPE  298 (372)
T ss_dssp             EE-----HHHHHHHHHHHHHHCTT
T ss_pred             cc-----HHHHHHHHHHHhCCCcc
Confidence            54     57778888888776543

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.40  E-value=4.6e-12  Score=105.01  Aligned_cols=196  Identities=12%  Similarity=0.002  Sum_probs=136.4

Q ss_pred             HHHHHHHHhcCCCeEEE---EccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHH
Q 025124            9 RSAVAALHSLGIPAIGL---EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI   85 (257)
Q Consensus         9 ~~~~~~l~~~~~~~~~~---~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~   85 (257)
                      ..+++.|.+.|.++..+   .+|++|.+++.++++..     ++|+|||+||.....    ...++++..+++|+.++.+
T Consensus        19 ~~l~~~L~~~g~~V~~~~r~~~D~~d~~~~~~~~~~~-----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~   89 (287)
T 3sc6_A           19 KQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEI-----RPHIIIHCAAYTKVD----QAEKERDLAYVINAIGARN   89 (287)
T ss_dssp             HHHHHHSCTTTEEEEEECTTTSCTTCHHHHHHHHHHH-----CCSEEEECCCCCCHH----HHTTCHHHHHHHHTHHHHH
T ss_pred             HHHHHHHHhCCCEEEEecccccCCCCHHHHHHHHHhc-----CCCEEEECCcccChH----HHhcCHHHHHHHHHHHHHH
Confidence            34566666666566554   48999999999888865     799999999965421    1224577899999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCCCCCceEEEEccccccccc-----------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEE
Q 025124           86 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRV  154 (257)
Q Consensus        86 l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~-----------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v  154 (257)
                      +++++.+.             +.++|++||...+.+.           .+...|+.+|.+.+.+++.++.        ++
T Consensus        90 l~~~~~~~-------------~~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~--------~~  148 (287)
T 3sc6_A           90 VAVASQLV-------------GAKLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELHN--------KY  148 (287)
T ss_dssp             HHHHHHHH-------------TCEEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCS--------SE
T ss_pred             HHHHHHHc-------------CCeEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC--------Cc
Confidence            99988553             3479999998655332           2356899999999999886542        34


Q ss_pred             EEEecCcccCCCCCCCCChHHHHHHhhhhcc-------CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCC
Q 025124          155 NGIAPGPIKDTAGVSKLAPEEIRSKATDYMA-------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPR  227 (257)
Q Consensus       155 ~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~  227 (257)
                      +.++|+.+..+....  .............+       ...+.+++|+|+++++++....    +..+++.+|..+.   
T Consensus       149 ~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s---  219 (287)
T 3sc6_A          149 FIVRTSWLYGKYGNN--FVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHTSL----YGTYHVSNTGSCS---  219 (287)
T ss_dssp             EEEEECSEECSSSCC--HHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHHTSCC----CEEEECCCBSCEE---
T ss_pred             EEEeeeeecCCCCCc--HHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHHhCCC----CCeEEEcCCCccc---
Confidence            788999998764211  11222222221111       1235669999999999997653    5688888875444   


Q ss_pred             CCcHHHHHHHHHHHhccC
Q 025124          228 DLPKEAVNQLSRAVERKS  245 (257)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~  245 (257)
                        ..++...+.+....+.
T Consensus       220 --~~e~~~~i~~~~g~~~  235 (287)
T 3sc6_A          220 --WFEFAKKIFSYANMKV  235 (287)
T ss_dssp             --HHHHHHHHHHHHTCCC
T ss_pred             --HHHHHHHHHHHcCCCc
Confidence              5777888888887654

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.40  E-value=4.7e-12  Score=106.56  Aligned_cols=185  Identities=12%  Similarity=-0.008  Sum_probs=117.6

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      ++.++.+|++|.++++.+++       ++|+|||+|+..   .+.  ..+.++..+++|+.|++++++++.+.+   +  
T Consensus        54 ~~~~~~~Dl~d~~~~~~~~~-------~~d~vih~A~~~---~~~--~~~~~~~~~~~nv~gt~~l~~aa~~~~---~--  116 (322)
T 2p4h_X           54 KLHFFNADLSNPDSFAAAIE-------GCVGIFHTASPI---DFA--VSEPEEIVTKRTVDGALGILKACVNSK---T--  116 (322)
T ss_dssp             HEEECCCCTTCGGGGHHHHT-------TCSEEEECCCCC-------------CHHHHHHHHHHHHHHHHHTTCS---S--
T ss_pred             ceEEEecCCCCHHHHHHHHc-------CCCEEEEcCCcc---cCC--CCChHHHHHHHHHHHHHHHHHHHHhcC---C--
Confidence            46788999999998887765       589999999632   111  112235689999999999999886531   2  


Q ss_pred             CCCCCCCceEEEEccccccccccc---------------------c-hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124          101 QASSSSGGIIINISATLHYTATWY---------------------Q-IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~~~~~---------------------~-~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                            .++||++||..+..+.+.                     . ..|+.+|.+.+.+++.++.+    +|++++.++
T Consensus       117 ------~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~----~gi~~~~lr  186 (322)
T 2p4h_X          117 ------VKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ----NGIDVVTLI  186 (322)
T ss_dssp             ------CCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH----TTCCEEEEE
T ss_pred             ------ccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcccccHHHHHHHHHHHHHHHHHh----cCCcEEEEc
Confidence                  468999999875432210                     1 16999999888877766543    479999999


Q ss_pred             cCcccCCCCCCCCChHH--HHHHhhhh---ccCC--CCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcH
Q 025124          159 PGPIKDTAGVSKLAPEE--IRSKATDY---MAAY--KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPK  231 (257)
Q Consensus       159 Pg~v~t~~~~~~~~~~~--~~~~~~~~---~~~~--~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~  231 (257)
                      |+.+.+++.........  ........   .+..  .+.+++|+|+++++++....  .+|. ++. ++..+.     ..
T Consensus       187 p~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~--~~g~-~~~-~~~~~s-----~~  257 (322)
T 2p4h_X          187 LPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIYLLENSV--PGGR-YNC-SPFIVP-----IE  257 (322)
T ss_dssp             ECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEEEEEEEEHHHHHHHHHHHHHSCC--CCEE-EEC-CCEEEE-----HH
T ss_pred             CCceECCCCCCCCCchHHHHHHHHhCCCccCcCCCcCEEEHHHHHHHHHHHhhCcC--CCCC-EEE-cCCCCC-----HH
Confidence            99999886543222111  10001110   1111  37899999999999996532  4565 443 332222     34


Q ss_pred             HHHHHHHHHH
Q 025124          232 EAVNQLSRAV  241 (257)
Q Consensus       232 ~~~~~~~~~~  241 (257)
                      ++.+.|.+..
T Consensus       258 e~~~~i~~~~  267 (322)
T 2p4h_X          258 EMSQLLSAKY  267 (322)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHHHhC
Confidence            5555555443

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.39  E-value=1.5e-12  Score=103.88  Aligned_cols=170  Identities=11%  Similarity=0.009  Sum_probs=108.8

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++      ...++.++.+|++|.++         +.++++|+|||++|..+...           ...+|+.
T Consensus        31 ~R~~~~~~~~------~~~~~~~~~~D~~d~~~---------~~~~~~d~vi~~ag~~~~~~-----------~~~~n~~   84 (224)
T 3h2s_A           31 VRDPQKAADR------LGATVATLVKEPLVLTE---------ADLDSVDAVVDALSVPWGSG-----------RGYLHLD   84 (224)
T ss_dssp             ESCHHHHHHH------TCTTSEEEECCGGGCCH---------HHHTTCSEEEECCCCCTTSS-----------CTHHHHH
T ss_pred             Eecccccccc------cCCCceEEecccccccH---------hhcccCCEEEECCccCCCcc-----------hhhHHHH
Confidence            4666555432      12468899999999887         23468999999999752211           1245666


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccccccc--------------chhhHHHHHHHHHHHHHHHHHhc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY--------------QIHVSAAKAAVDSITRSLALEWG  147 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~--------------~~~Y~~sK~a~~~l~~~la~e~~  147 (257)
                      ++..+++    .+++.         ++++|++||.++..+.+.              ...|+.+|.+.+.+ +.+   ..
T Consensus        85 ~~~~l~~----a~~~~---------~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~-~~~---~~  147 (224)
T 3h2s_A           85 FATHLVS----LLRNS---------DTLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEY-QFL---QM  147 (224)
T ss_dssp             HHHHHHH----TCTTC---------CCEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHH-HHH---TT
T ss_pred             HHHHHHH----HHHHc---------CCcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHHH-HHH---Hh
Confidence            6544444    44443         478999999876654333              57899999988854 222   23


Q ss_pred             CCCCeEEEEEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecC
Q 025124          148 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDG  219 (257)
Q Consensus       148 ~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dg  219 (257)
                       ..|++++.++||++.++.....+...  ............+.+++|+|++++.++..+.  ..|+.+++.+
T Consensus       148 -~~~i~~~ivrp~~v~g~~~~~~~~~~--~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~--~~g~~~~~~~  214 (224)
T 3h2s_A          148 -NANVNWIGISPSEAFPSGPATSYVAG--KDTLLVGEDGQSHITTGNMALAILDQLEHPT--AIRDRIVVRD  214 (224)
T ss_dssp             -CTTSCEEEEEECSBCCCCCCCCEEEE--SSBCCCCTTSCCBCCHHHHHHHHHHHHHSCC--CTTSEEEEEE
T ss_pred             -cCCCcEEEEcCccccCCCcccCceec--ccccccCCCCCceEeHHHHHHHHHHHhcCcc--ccCCEEEEec
Confidence             56899999999999977322110000  0000000112346899999999999997643  4588888765

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.38  E-value=1.1e-11  Score=114.49  Aligned_cols=192  Identities=16%  Similarity=0.070  Sum_probs=133.6

Q ss_pred             CCeEEEEccCCCHHH-HHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Q 025124           20 IPAIGLEGDVRKRED-AVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~-~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (257)
                      .++.++.+|++|.++ ++.+++       ++|+|||+||.....    ...++++..+++|+.++.++++++.+.     
T Consensus       360 ~~v~~v~~Dl~d~~~~~~~~~~-------~~D~Vih~Aa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~aa~~~-----  423 (660)
T 1z7e_A          360 PHFHFVEGDISIHSEWIEYHVK-------KCDVVLPLVAIATPI----EYTRNPLRVFELDFEENLRIIRYCVKY-----  423 (660)
T ss_dssp             TTEEEEECCTTTCHHHHHHHHH-------HCSEEEECCCCCCTH----HHHHSHHHHHHHHTHHHHHHHHHHHHT-----
T ss_pred             CceEEEECCCCCcHHHHHHhhc-------CCCEEEECceecCcc----ccccCHHHHHHhhhHHHHHHHHHHHHh-----
Confidence            457889999998765 554543       589999999964321    123456789999999999998887542     


Q ss_pred             CCCCCCCCCceEEEEccccccccc------------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           99 RGQASSSSGGIIINISATLHYTAT------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        99 ~~~~~~~~~g~ii~iss~~~~~~~------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                              ++++|++||...+.+.                  .....|+.+|.+.+.+++.++.+.    |++++.++||
T Consensus       424 --------~~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~----gi~~~ilRpg  491 (660)
T 1z7e_A          424 --------RKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE----GLQFTLFRPF  491 (660)
T ss_dssp             --------TCEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH----CCCEEEEEEC
T ss_pred             --------CCEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHHHHHHHHHHHHHHHc----CCCEEEECCC
Confidence                    3579999997654221                  122379999999999999998764    6999999999


Q ss_pred             cccCCCCCC--------CCChHHHHHHhhhhcc---------CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc-c
Q 025124          161 PIKDTAGVS--------KLAPEEIRSKATDYMA---------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN-W  222 (257)
Q Consensus       161 ~v~t~~~~~--------~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~-~  222 (257)
                      .+.++....        ...-..+........+         ...+.+++|+|++++.++........|+.+++++|. .
T Consensus       492 ~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~~~  571 (660)
T 1z7e_A          492 NWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENE  571 (660)
T ss_dssp             SEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGGGE
T ss_pred             cccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCCCC
Confidence            999875421        0001122222222211         123678999999999999765444678999999874 3


Q ss_pred             cCCCCCCcHHHHHHHHHHHhcc
Q 025124          223 LSNPRDLPKEAVNQLSRAVERK  244 (257)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~  244 (257)
                      +.     ..++...|.+....+
T Consensus       572 ~s-----~~el~~~i~~~~g~~  588 (660)
T 1z7e_A          572 AS-----IEELGEMLLASFEKH  588 (660)
T ss_dssp             EE-----HHHHHHHHHHHHHHC
T ss_pred             cC-----HHHHHHHHHHHhcCC
Confidence            43     466777777777654

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.37  E-value=4.1e-12  Score=101.09  Aligned_cols=161  Identities=11%  Similarity=-0.013  Sum_probs=97.8

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|++|.++         +.+.++|+|||++|....             ....|+.+    ++.+++.+++.+ 
T Consensus        42 ~~~~~~~~D~~d~~~---------~~~~~~d~vi~~ag~~~~-------------~~~~~~~~----~~~l~~a~~~~~-   94 (221)
T 3ew7_A           42 KDINILQKDIFDLTL---------SDLSDQNVVVDAYGISPD-------------EAEKHVTS----LDHLISVLNGTV-   94 (221)
T ss_dssp             SSSEEEECCGGGCCH---------HHHTTCSEEEECCCSSTT-------------TTTSHHHH----HHHHHHHHCSCC-
T ss_pred             CCCeEEeccccChhh---------hhhcCCCEEEECCcCCcc-------------ccchHHHH----HHHHHHHHHhcC-
Confidence            467889999999887         234689999999997422             12334444    455555566554 


Q ss_pred             CCCCCCCCceEEEEcccccccccc------------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCC
Q 025124          100 GQASSSSGGIIINISATLHYTATW------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG  167 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~~~~------------~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~  167 (257)
                             .+++|++||..+..+.+            ....|+.+|.+.+.+. .+..  . ..|++++.|+||++.++..
T Consensus        95 -------~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~-~~~~--~-~~gi~~~ivrp~~v~g~~~  163 (221)
T 3ew7_A           95 -------SPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLE-HLKS--H-QAEFSWTYISPSAMFEPGE  163 (221)
T ss_dssp             -------SSEEEEECCCC-------------------CCCSCCHHHHHHHHH-HHHT--T-TTTSCEEEEECSSCCCCC-
T ss_pred             -------CceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHHH-HHHh--h-ccCccEEEEeCcceecCCC
Confidence                   58899999987765443            2355999999998873 3332  2 4589999999999998722


Q ss_pred             CCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          168 VSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                      ........ ............+.+++|+|++++.++..+.  ..|+.+++.+..
T Consensus       164 ~~~~~~~~-~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~--~~g~~~~~~~~~  214 (221)
T 3ew7_A          164 RTGDYQIG-KDHLLFGSDGNSFISMEDYAIAVLDEIERPN--HLNEHFTVAGKL  214 (221)
T ss_dssp             ---------------------CCCHHHHHHHHHHHHHSCS--CTTSEEECCC--
T ss_pred             ccCceEec-cccceecCCCCceEeHHHHHHHHHHHHhCcc--ccCCEEEECCCC
Confidence            11100000 0000000111247899999999999997653  458888887753

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.34  E-value=3.1e-11  Score=102.63  Aligned_cols=183  Identities=11%  Similarity=-0.019  Sum_probs=124.8

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      ++.++.+|+++..            +.++|+|||+||.......    .++++..+++|+.++.++++++.+.       
T Consensus        76 ~~~~~~~D~~~~~------------~~~~d~vih~A~~~~~~~~----~~~~~~~~~~n~~~~~~l~~a~~~~-------  132 (343)
T 2b69_A           76 NFELINHDVVEPL------------YIEVDQIYHLASPASPPNY----MYNPIKTLKTNTIGTLNMLGLAKRV-------  132 (343)
T ss_dssp             TEEEEECCTTSCC------------CCCCSEEEECCSCCSHHHH----TTCHHHHHHHHHHHHHHHHHHHHHH-------
T ss_pred             ceEEEeCccCChh------------hcCCCEEEECccccCchhh----hhCHHHHHHHHHHHHHHHHHHHHHh-------
Confidence            4667777777642            4579999999996432111    1245678899999999999988653       


Q ss_pred             CCCCCCCceEEEEccccccc----------------ccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccC
Q 025124          101 QASSSSGGIIINISATLHYT----------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD  164 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~----------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t  164 (257)
                            +.++|++||...+.                +......|+.+|.+.+.+++.++.+.    |++++.++||.+.+
T Consensus       133 ------~~~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilrp~~v~G  202 (343)
T 2b69_A          133 ------GARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE----GVEVRVARIFNTFG  202 (343)
T ss_dssp             ------TCEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECCEEC
T ss_pred             ------CCcEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHHHHHHHHHHHHh----CCcEEEEEEcceeC
Confidence                  24799999976542                22235679999999999999988764    69999999999998


Q ss_pred             CCCCCCCC--hHHHHHHhhhhcc---------CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHH
Q 025124          165 TAGVSKLA--PEEIRSKATDYMA---------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEA  233 (257)
Q Consensus       165 ~~~~~~~~--~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~  233 (257)
                      +.......  -..+........+         ...+..++|+|++++.++...    .+..+++.+|..+.     ..++
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~----~~~~~~i~~~~~~s-----~~e~  273 (343)
T 2b69_A          203 PRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN----VSSPVNLGNPEEHT-----ILEF  273 (343)
T ss_dssp             TTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS----CCSCEEESCCCEEE-----HHHH
T ss_pred             cCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcC----CCCeEEecCCCCCc-----HHHH
Confidence            75432111  1122222212111         123568999999999998653    25678888775444     5677


Q ss_pred             HHHHHHHHhccC
Q 025124          234 VNQLSRAVERKS  245 (257)
Q Consensus       234 ~~~~~~~~~~~~  245 (257)
                      ...+.+....+.
T Consensus       274 ~~~i~~~~g~~~  285 (343)
T 2b69_A          274 AQLIKNLVGSGS  285 (343)
T ss_dssp             HHHHHHHHTCCC
T ss_pred             HHHHHHHhCCCC
Confidence            888888777653

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.34  E-value=1.1e-11  Score=103.86  Aligned_cols=189  Identities=11%  Similarity=-0.045  Sum_probs=127.1

Q ss_pred             eEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCC
Q 025124           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ  101 (257)
Q Consensus        22 ~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  101 (257)
                      +.++.+|++|.+++++++++.     ++|+|||+||.....     ..++++..+++|+.++.++++++.+    .+   
T Consensus        47 ~~~~~~D~~d~~~~~~~~~~~-----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~---  109 (312)
T 2yy7_A           47 GPFEVVNALDFNQIEHLVEVH-----KITDIYLMAALLSAT-----AEKNPAFAWDLNMNSLFHVLNLAKA----KK---  109 (312)
T ss_dssp             SCEEECCTTCHHHHHHHHHHT-----TCCEEEECCCCCHHH-----HHHCHHHHHHHHHHHHHHHHHHHHT----TS---
T ss_pred             CceEEecCCCHHHHHHHHhhc-----CCCEEEECCccCCCc-----hhhChHHHHHHHHHHHHHHHHHHHH----cC---
Confidence            567889999999988887653     799999999964321     2356778999999999999988754    22   


Q ss_pred             CCCCCCceEEEEccccccccc------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCC
Q 025124          102 ASSSSGGIIINISATLHYTAT------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS  169 (257)
Q Consensus       102 ~~~~~~g~ii~iss~~~~~~~------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~  169 (257)
                           .+++|++||...+.+.            .+...|+.+|.+.+.+++.++.++    |++++.++|+.+..+....
T Consensus       110 -----~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~lrp~~v~g~~~~~  180 (312)
T 2yy7_A          110 -----IKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWCEYYHNIY----GVDVRSIRYPGLISWSTPP  180 (312)
T ss_dssp             -----CSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEECEEECEEECSSSCC
T ss_pred             -----CCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHHHHHHHHHHHHhc----CCcEEEEeCCeEecCCCCC
Confidence                 4689999998665331            235689999999999999988764    6999999999998754321


Q ss_pred             CCC-----hHHHHHHhhhhc--------cCCCCCCHHhHHHHHHHhccCCCCcc-cCcEEEecCCcccCCCCCCcHHHHH
Q 025124          170 KLA-----PEEIRSKATDYM--------AAYKFGEKWDIAMAALYLASDAGKYV-NGNTLIVDGGNWLSNPRDLPKEAVN  235 (257)
Q Consensus       170 ~~~-----~~~~~~~~~~~~--------~~~~~~~~~dva~~~~~l~~~~~~~~-~G~~~~~dgg~~~~~~~~~~~~~~~  235 (257)
                      ...     ...+........        ....+.+.+|++++++.++....... .|+.+++.+ ..+.     ..++..
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~-~~~s-----~~e~~~  254 (312)
T 2yy7_A          181 GGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVEKIKIHSSYNLAA-MSFT-----PTEIAN  254 (312)
T ss_dssp             CSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCGGGCCCSSCEECCS-EEEC-----HHHHHH
T ss_pred             CCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCcccccccCceEEeCC-CccC-----HHHHHH
Confidence            111     111111111111        11124678999999999997543322 247788764 3222     345555


Q ss_pred             HHHHHHh
Q 025124          236 QLSRAVE  242 (257)
Q Consensus       236 ~~~~~~~  242 (257)
                      .+.+...
T Consensus       255 ~i~~~~~  261 (312)
T 2yy7_A          255 EIKKHIP  261 (312)
T ss_dssp             HHHTTCT
T ss_pred             HHHHHCC
Confidence            5555443

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.33  E-value=7.1e-12  Score=104.42  Aligned_cols=197  Identities=12%  Similarity=-0.008  Sum_probs=132.5

Q ss_pred             HHHHHHHhcCCCeEEE-------EccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHH
Q 025124           10 SAVAALHSLGIPAIGL-------EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG   82 (257)
Q Consensus        10 ~~~~~l~~~~~~~~~~-------~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~   82 (257)
                      .+++.|. .|.++..+       .+|++|.+++.++++..     ++|+|||+||.....    ...++++..+++|+.+
T Consensus        15 ~l~~~L~-~g~~V~~~~r~~~~~~~D~~d~~~~~~~~~~~-----~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~   84 (299)
T 1n2s_A           15 ELQRSLA-PVGNLIALDVHSKEFCGDFSNPKGVAETVRKL-----RPDVIVNAAAHTAVD----KAESEPELAQLLNATS   84 (299)
T ss_dssp             HHHHHTT-TTSEEEEECTTCSSSCCCTTCHHHHHHHHHHH-----CCSEEEECCCCCCHH----HHTTCHHHHHHHHTHH
T ss_pred             HHHHHhh-cCCeEEEeccccccccccCCCHHHHHHHHHhc-----CCCEEEECcccCCHh----hhhcCHHHHHHHHHHH
Confidence            4555555 45555443       48999999988888754     699999999964321    1224567789999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccc-----------cchhhHHHHHHHHHHHHHHHHHhcCCCC
Q 025124           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-----------YQIHVSAAKAAVDSITRSLALEWGTDYA  151 (257)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~-----------~~~~Y~~sK~a~~~l~~~la~e~~~~~g  151 (257)
                      +.++++++.+    .         +.++|++||...+.+..           +...|+.+|.+.+.+++.++     .  
T Consensus        85 ~~~l~~a~~~----~---------~~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~-----~--  144 (299)
T 1n2s_A           85 VEAIAKAANE----T---------GAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNC-----P--  144 (299)
T ss_dssp             HHHHHHHHTT----T---------TCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHHC-----S--
T ss_pred             HHHHHHHHHH----c---------CCcEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHhC-----C--
Confidence            9999988742    1         34799999986543321           24689999999999887653     2  


Q ss_pred             eEEEEEecCcccCCCCCCCCChHHHHHHhhhhcc-------CCCCCCHHhHHHHHHHhccCCCCcc-cCcEEEecCCccc
Q 025124          152 IRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA-------AYKFGEKWDIAMAALYLASDAGKYV-NGNTLIVDGGNWL  223 (257)
Q Consensus       152 i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~dva~~~~~l~~~~~~~~-~G~~~~~dgg~~~  223 (257)
                       +++.++|+.+.++... .. ............+       ...+.+++|++++++.++....... .|+.+++.+|..+
T Consensus       145 -~~~ilRp~~v~G~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~i~~~~~~  221 (299)
T 1n2s_A          145 -KHLIFRTSWVYAGKGN-NF-AKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTT  221 (299)
T ss_dssp             -SEEEEEECSEECSSSC-CH-HHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBSCE
T ss_pred             -CeEEEeeeeecCCCcC-cH-HHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHHHHhccccccCceEEEeCCCCC
Confidence             6788999999977532 11 1122222222111       1235569999999999997532122 4788999887544


Q ss_pred             CCCCCCcHHHHHHHHHHHhcc
Q 025124          224 SNPRDLPKEAVNQLSRAVERK  244 (257)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~  244 (257)
                      .     ..++.+.+.+..+.+
T Consensus       222 s-----~~e~~~~i~~~~g~~  237 (299)
T 1n2s_A          222 T-----WHDYAALVFDEARKA  237 (299)
T ss_dssp             E-----HHHHHHHHHHHHHHH
T ss_pred             C-----HHHHHHHHHHHhCCC
Confidence            4     567777777777665

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.29  E-value=4.6e-11  Score=98.88  Aligned_cols=173  Identities=14%  Similarity=0.046  Sum_probs=118.8

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      ++.++.+|++|.+++.++++       ++|++||+++...       . +      ++|+.++.++++++..    .+  
T Consensus        46 ~~~~~~~D~~d~~~l~~~~~-------~~d~vi~~a~~~~-------~-~------~~n~~~~~~l~~a~~~----~~--   98 (287)
T 2jl1_A           46 GVEVRHGDYNQPESLQKAFA-------GVSKLLFISGPHY-------D-N------TLLIVQHANVVKAARD----AG--   98 (287)
T ss_dssp             TCEEEECCTTCHHHHHHHTT-------TCSEEEECCCCCS-------C-H------HHHHHHHHHHHHHHHH----TT--
T ss_pred             CCeEEEeccCCHHHHHHHHh-------cCCEEEEcCCCCc-------C-c------hHHHHHHHHHHHHHHH----cC--
Confidence            57889999999988887764       5899999999521       1 1      5688888888777643    33  


Q ss_pred             CCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHHHHh
Q 025124          101 QASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA  180 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~  180 (257)
                            -++||++||.... +  ....|+.+|.+.+.+++.        .|++++.++||++.++.... ..........
T Consensus        99 ------~~~~v~~Ss~~~~-~--~~~~y~~~K~~~E~~~~~--------~~~~~~ilrp~~~~~~~~~~-~~~~~~~~~~  160 (287)
T 2jl1_A           99 ------VKHIAYTGYAFAE-E--SIIPLAHVHLATEYAIRT--------TNIPYTFLRNALYTDFFVNE-GLRASTESGA  160 (287)
T ss_dssp             ------CSEEEEEEETTGG-G--CCSTHHHHHHHHHHHHHH--------TTCCEEEEEECCBHHHHSSG-GGHHHHHHTE
T ss_pred             ------CCEEEEECCCCCC-C--CCCchHHHHHHHHHHHHH--------cCCCeEEEECCEeccccchh-hHHHHhhCCc
Confidence                  4689999998764 2  234799999999988752        37899999999987643111 1111111100


Q ss_pred             ---hhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHHHHHHhccC
Q 025124          181 ---TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKS  245 (257)
Q Consensus       181 ---~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~~~~~~~  245 (257)
                         ........+.+++|++++++.++..+.  ..|+.+++.+|..+.     ..++...+.+..+++.
T Consensus       161 ~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g~~~~i~~~~~~s-----~~e~~~~i~~~~g~~~  221 (287)
T 2jl1_A          161 IVTNAGSGIVNSVTRNELALAAATVLTEEG--HENKTYNLVSNQPWT-----FDELAQILSEVSGKKV  221 (287)
T ss_dssp             EEESCTTCCBCCBCHHHHHHHHHHHHTSSS--CTTEEEEECCSSCBC-----HHHHHHHHHHHHSSCC
T ss_pred             eeccCCCCccCccCHHHHHHHHHHHhcCCC--CCCcEEEecCCCcCC-----HHHHHHHHHHHHCCcc
Confidence               001122357899999999999997542  468899999875544     5677777777776654

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.29  E-value=2.6e-11  Score=108.66  Aligned_cols=170  Identities=12%  Similarity=-0.013  Sum_probs=117.7

Q ss_pred             CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Q 025124           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (257)
Q Consensus        19 ~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (257)
                      ..++.++.+|+++++.+.        ...++|+|||+|+....       ...++..+++|+.++.++++++.+     .
T Consensus       210 ~~~v~~v~~Dl~d~~~l~--------~~~~~D~Vih~Aa~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-----~  269 (508)
T 4f6l_B          210 LSNIEVIVGDFECMDDVV--------LPENMDTIIHAGARTDH-------FGDDDEFEKVNVQGTVDVIRLAQQ-----H  269 (508)
T ss_dssp             STTEEEEEEBTTBCSSCC--------CSSCCSEEEECCCC---------------CCHHHHHHHHHHHHHHHHT-----T
T ss_pred             cCceEEEecCCcccccCC--------CccCCCEEEECCceecC-------CCCHHHHhhhHHHHHHHHHHHHHh-----C
Confidence            468999999999988776        34689999999996531       234566888999999999998865     2


Q ss_pred             CCCCCCCCCceEEEEccccc--cc----------------ccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           99 RGQASSSSGGIIINISATLH--YT----------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        99 ~~~~~~~~~g~ii~iss~~~--~~----------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                              ..++|++||...  ..                +......|+.+|.+.+.+++.++.     .|++++.++||
T Consensus       270 --------~~~~v~iSS~~vG~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-----~gi~~~ilRp~  336 (508)
T 4f6l_B          270 --------HARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN-----NGLDGRIVRVG  336 (508)
T ss_dssp             --------TCEEEEEEESCTTSEECTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH-----TTCEEEEEEEC
T ss_pred             --------CCcEEEeCChhhccCCccCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH-----cCCCEEEEecc
Confidence                    467999999876  10                011456899999999999988642     47999999999


Q ss_pred             cccCCCCCCCCCh-------HHHHHHhhhh--cc------CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          161 PIKDTAGVSKLAP-------EEIRSKATDY--MA------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       161 ~v~t~~~~~~~~~-------~~~~~~~~~~--~~------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      .+..+.....+..       ..........  .+      ...+..++|+|+++++++....   .|.++++.++..+.
T Consensus       337 ~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~---~~~~~nl~~~~~~s  412 (508)
T 4f6l_B          337 NLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKMP  412 (508)
T ss_dssp             CEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGSEEECEEHHHHHHHHHHHTTBCC---SCSEEEESCSCEEE
T ss_pred             eeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCceEEEEcHHHHHHHHHHHHhCCC---CCCEEEeCCCCCCC
Confidence            9988754332111       1111111111  11      1125678999999999997654   68899998876543

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.28  E-value=1.1e-10  Score=98.06  Aligned_cols=188  Identities=14%  Similarity=0.042  Sum_probs=124.5

Q ss_pred             eEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCC
Q 025124           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ  101 (257)
Q Consensus        22 ~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  101 (257)
                      +.++.+|++|.+++.++++.     .++|+|||+|+....     ...++++..+++|+.++.++++++.+    .+   
T Consensus        41 ~~~~~~D~~d~~~~~~~~~~-----~~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~---  103 (317)
T 3ajr_A           41 IKFITLDVSNRDEIDRAVEK-----YSIDAIFHLAGILSA-----KGEKDPALAYKVNMNGTYNILEAAKQ----HR---  103 (317)
T ss_dssp             CCEEECCTTCHHHHHHHHHH-----TTCCEEEECCCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHHHH----TT---
T ss_pred             ceEEEecCCCHHHHHHHHhh-----cCCcEEEECCcccCC-----ccccChHHHhhhhhHHHHHHHHHHHH----cC---
Confidence            45678999999998888764     279999999996432     12356778999999999999998754    22   


Q ss_pred             CCCCCCceEEEEccccccccc------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCC
Q 025124          102 ASSSSGGIIINISATLHYTAT------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS  169 (257)
Q Consensus       102 ~~~~~~g~ii~iss~~~~~~~------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~  169 (257)
                           .++||++||...+.+.            .+...|+.+|.+.+.+++.++.++    |++++.++|+.+..+....
T Consensus       104 -----~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~lR~~~~~g~~~~~  174 (317)
T 3ajr_A          104 -----VEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEKF----GLDVRSLRYPGIISYKAEP  174 (317)
T ss_dssp             -----CCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEECSSSCC
T ss_pred             -----CCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHHHHHHHHHHhc----CCeEEEEecCcEeccCCCC
Confidence                 4689999998765432            135689999999999999888654    6999999977776543211


Q ss_pred             CCC--h---HHHHHHhhhhc--------cCCCCCCHHhHHHHHHHhccCCCC-cccCcEEEecCCcccCCCCCCcHHHHH
Q 025124          170 KLA--P---EEIRSKATDYM--------AAYKFGEKWDIAMAALYLASDAGK-YVNGNTLIVDGGNWLSNPRDLPKEAVN  235 (257)
Q Consensus       170 ~~~--~---~~~~~~~~~~~--------~~~~~~~~~dva~~~~~l~~~~~~-~~~G~~~~~dgg~~~~~~~~~~~~~~~  235 (257)
                      ...  .   ..+........        ....+.+.+|++++++.++..... ..+|+.+++.++ .+.     ..++..
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~~~~g~~~~i~~~-~~s-----~~e~~~  248 (317)
T 3ajr_A          175 TAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKLVLRNGYNVTAY-TFT-----PSELYS  248 (317)
T ss_dssp             CSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGGGCSSCSCEECCSE-EEC-----HHHHHH
T ss_pred             CCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCccccccCceEecCCc-ccc-----HHHHHH
Confidence            110  0   11111111110        011235689999999988865432 234678888753 222     345555


Q ss_pred             HHHHHH
Q 025124          236 QLSRAV  241 (257)
Q Consensus       236 ~~~~~~  241 (257)
                      .+.+..
T Consensus       249 ~i~~~~  254 (317)
T 3ajr_A          249 KIKERI  254 (317)
T ss_dssp             HHHTTC
T ss_pred             HHHHHC
Confidence            555444

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.24  E-value=5.8e-12  Score=106.81  Aligned_cols=186  Identities=13%  Similarity=0.060  Sum_probs=116.3

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|++|.++++.+++       ++|+|||+|+...   +.  ..+..+..+++|+.|++++++++.+..   . 
T Consensus        59 ~~~~~~~~Dl~d~~~~~~~~~-------~~D~Vih~A~~~~---~~--~~~~~~~~~~~nv~gt~~ll~aa~~~~---~-  122 (338)
T 2rh8_A           59 GDLKIFRADLTDELSFEAPIA-------GCDFVFHVATPVH---FA--SEDPENDMIKPAIQGVVNVMKACTRAK---S-  122 (338)
T ss_dssp             SCEEEEECCTTTSSSSHHHHT-------TCSEEEEESSCCC---C-----------CHHHHHHHHHHHHHHHHCT---T-
T ss_pred             CcEEEEecCCCChHHHHHHHc-------CCCEEEEeCCccC---CC--CCCcHHHHHHHHHHHHHHHHHHHHHcC---C-
Confidence            468889999999988777664       5899999998532   11  112224589999999999999887532   1 


Q ss_pred             CCCCCCCCceEEEEcccccccccc------------------------cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEE
Q 025124          100 GQASSSSGGIIINISATLHYTATW------------------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVN  155 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~~~~------------------------~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~  155 (257)
                             -++||++||.++..+.+                        ....|+.+|.+.+.+++.++.+.    |++++
T Consensus       123 -------v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~  191 (338)
T 2rh8_A          123 -------VKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEEN----NIDLI  191 (338)
T ss_dssp             -------CCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHHH----TCCEE
T ss_pred             -------cCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccchHHHHHHHHHHHHHHHHHHc----CCcEE
Confidence                   36799999986432110                        01159999999999888877543    69999


Q ss_pred             EEecCcccCCCCCCCCChHH--HH---H----Hhh--hh----ccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCC
Q 025124          156 GIAPGPIKDTAGVSKLAPEE--IR---S----KAT--DY----MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG  220 (257)
Q Consensus       156 ~v~Pg~v~t~~~~~~~~~~~--~~---~----~~~--~~----~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg  220 (257)
                      .++|+.+.+|..........  ..   .    .+.  ..    .....+.+++|+|+++++++....  ..|. +++.++
T Consensus       192 ~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~--~~~~-~~~~~~  268 (338)
T 2rh8_A          192 TVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKES--ASGR-YICCAA  268 (338)
T ss_dssp             EEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSSEEEEEHHHHHHHHHHHHHCTT--CCEE-EEECSE
T ss_pred             EEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccCcccEEEHHHHHHHHHHHHcCCC--cCCc-EEEecC
Confidence            99999999986543322110  00   0    000  00    001147899999999999996432  3443 444333


Q ss_pred             cccCCCCCCcHHHHHHHHHHH
Q 025124          221 NWLSNPRDLPKEAVNQLSRAV  241 (257)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~  241 (257)
                      . +     -..++.+.+.+..
T Consensus       269 ~-~-----s~~e~~~~l~~~~  283 (338)
T 2rh8_A          269 N-T-----SVPELAKFLSKRY  283 (338)
T ss_dssp             E-E-----CHHHHHHHHHHHC
T ss_pred             C-C-----CHHHHHHHHHHhC
Confidence            1 1     1345555665544

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.24  E-value=9.9e-11  Score=108.82  Aligned_cols=199  Identities=11%  Similarity=-0.057  Sum_probs=131.1

Q ss_pred             CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Q 025124           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (257)
Q Consensus        19 ~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (257)
                      +.++.++.+|++|.+++++++++.     ++|+|||+||......    ..+..+..+++|+.++..+++++..    .+
T Consensus        60 ~~~v~~v~~Dl~d~~~l~~~~~~~-----~~D~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~  126 (699)
T 1z45_A           60 KHHIPFYEVDLCDRKGLEKVFKEY-----KIDSVIHFAGLKAVGE----STQIPLRYYHNNILGTVVLLELMQQ----YN  126 (699)
T ss_dssp             TSCCCEEECCTTCHHHHHHHHHHS-----CCCEEEECCSCCCHHH----HHHSHHHHHHHHHHHHHHHHHHHHH----HT
T ss_pred             CCceEEEEcCCCCHHHHHHHHHhC-----CCCEEEECCcccCcCc----cccCHHHHHHHHHHHHHHHHHHHHH----cC
Confidence            356788999999999988887653     7999999999643211    1233456889999999998876643    33


Q ss_pred             CCCCCCCCCceEEEEcccccccc---------------cccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccc
Q 025124           99 RGQASSSSGGIIINISATLHYTA---------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK  163 (257)
Q Consensus        99 ~~~~~~~~~g~ii~iss~~~~~~---------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~  163 (257)
                              .++||++||...+..               ......|+.+|.+++.+++.++.++  ..|+++..++|+.+.
T Consensus       127 --------~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~g~~~~ilR~~~vy  196 (699)
T 1z45_A          127 --------VSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSD--KKSWKFAILRYFNPI  196 (699)
T ss_dssp             --------CCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS--TTSCEEEEEEECEEE
T ss_pred             --------CCEEEEECcHHHhCCCccccccCCccccCCCCCCChHHHHHHHHHHHHHHHHHhc--cCCCcEEEEEecccc
Confidence                    478999999765421               1134689999999999999998874  358999999998887


Q ss_pred             CCCCCCC--------CC--hHHHHHHhhh---hc-------------cCCCCCCHHhHHHHHHHhccCC----CCcccCc
Q 025124          164 DTAGVSK--------LA--PEEIRSKATD---YM-------------AAYKFGEKWDIAMAALYLASDA----GKYVNGN  213 (257)
Q Consensus       164 t~~~~~~--------~~--~~~~~~~~~~---~~-------------~~~~~~~~~dva~~~~~l~~~~----~~~~~G~  213 (257)
                      .+.....        ..  ..........   ..             ....+...+|+|++++.++...    .....|.
T Consensus       197 G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~  276 (699)
T 1z45_A          197 GAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCR  276 (699)
T ss_dssp             CCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEE
T ss_pred             CCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCce
Confidence            6531100        00  0111111111   01             0112456899999998887521    0112356


Q ss_pred             EEEecCCcccCCCCCCcHHHHHHHHHHHhccC
Q 025124          214 TLIVDGGNWLSNPRDLPKEAVNQLSRAVERKS  245 (257)
Q Consensus       214 ~~~~dgg~~~~~~~~~~~~~~~~~~~~~~~~~  245 (257)
                      .+++.+|..+.     ..++...+.+...++.
T Consensus       277 ~yni~~~~~~s-----~~el~~~i~~~~g~~~  303 (699)
T 1z45_A          277 EWNLGSGKGST-----VFEVYHAFCKASGIDL  303 (699)
T ss_dssp             EEEESCSCCEE-----HHHHHHHHHHHHTCCC
T ss_pred             EEEECCCCCCc-----HHHHHHHHHHHhCCCC
Confidence            88888775443     4666777777776654

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.22  E-value=2.7e-11  Score=100.33  Aligned_cols=178  Identities=13%  Similarity=-0.014  Sum_probs=121.3

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      ++.++.+|++|.+++..+++      +++|+|||+||..         ..+.+..+++|+.++..+++++.    +.+  
T Consensus        42 ~~~~~~~Dl~d~~~~~~~~~------~~~d~vih~a~~~---------~~~~~~~~~~n~~~~~~ll~a~~----~~~--  100 (286)
T 3gpi_A           42 GVQTLIADVTRPDTLASIVH------LRPEILVYCVAAS---------EYSDEHYRLSYVEGLRNTLSALE----GAP--  100 (286)
T ss_dssp             TCCEEECCTTCGGGCTTGGG------GCCSEEEECHHHH---------HHC-----CCSHHHHHHHHHHTT----TSC--
T ss_pred             CCceEEccCCChHHHHHhhc------CCCCEEEEeCCCC---------CCCHHHHHHHHHHHHHHHHHHHh----hCC--
Confidence            35567899999998877665      3699999999852         23456778899999988888774    222  


Q ss_pred             CCCCCCCceEEEEccccccccc-----------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCC
Q 025124          101 QASSSSGGIIINISATLHYTAT-----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS  169 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~~~-----------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~  169 (257)
                            .++||++||...+...           .+...|+.+|.+.+.+ +..         ++++.++|+.+..+... 
T Consensus       101 ------~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~~---------~~~~ilR~~~v~G~~~~-  163 (286)
T 3gpi_A          101 ------LQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-LAA---------YSSTILRFSGIYGPGRL-  163 (286)
T ss_dssp             ------CCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-GGG---------SSEEEEEECEEEBTTBC-
T ss_pred             ------CCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-Hhc---------CCeEEEecccccCCCch-
Confidence                  4789999998654322           1356899999998887 532         67889999999876432 


Q ss_pred             CCChHHHHHHhhh------hccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHHHHHHhc
Q 025124          170 KLAPEEIRSKATD------YMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVER  243 (257)
Q Consensus       170 ~~~~~~~~~~~~~------~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~~~~~  243 (257)
                           .+......      ......+.+++|+|++++.++........|..+++.+|..+.     ..++...+.+....
T Consensus       164 -----~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~~~s-----~~e~~~~i~~~~g~  233 (286)
T 3gpi_A          164 -----RMIRQAQTPEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLP-----VHDLLRWLADRQGI  233 (286)
T ss_dssp             -----HHHHHTTCGGGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECCSCCEE-----HHHHHHHHHHHTTC
T ss_pred             -----hHHHHHHhcccCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEeCCCCCC-----HHHHHHHHHHHcCC
Confidence                 11111111      111224577899999999999764323568899998876544     56778888888776


Q ss_pred             cCC
Q 025124          244 KSR  246 (257)
Q Consensus       244 ~~~  246 (257)
                      +..
T Consensus       234 ~~~  236 (286)
T 3gpi_A          234 AYP  236 (286)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            543

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.21  E-value=1.5e-10  Score=95.58  Aligned_cols=170  Identities=12%  Similarity=0.087  Sum_probs=110.9

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      ++.++.+|++|.+++.++++       ++|+|||++|...                ..|+.++.++++++    .+.+  
T Consensus        45 ~~~~~~~D~~d~~~~~~~~~-------~~d~vi~~a~~~~----------------~~~~~~~~~l~~a~----~~~~--   95 (286)
T 2zcu_A           45 GITVRQADYGDEAALTSALQ-------GVEKLLLISSSEV----------------GQRAPQHRNVINAA----KAAG--   95 (286)
T ss_dssp             TCEEEECCTTCHHHHHHHTT-------TCSEEEECC------------------------CHHHHHHHHH----HHHT--
T ss_pred             CCeEEEcCCCCHHHHHHHHh-------CCCEEEEeCCCCc----------------hHHHHHHHHHHHHH----HHcC--
Confidence            57889999999988877664       6899999999521                02455555555544    4433  


Q ss_pred             CCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHHHHh
Q 025124          101 QASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA  180 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~  180 (257)
                            -++||++||.... +  ....|+.+|.+.+.+++.        .|++++.++||++.++.. . ..........
T Consensus        96 ------~~~~v~~Ss~~~~-~--~~~~y~~sK~~~e~~~~~--------~~~~~~ilrp~~~~~~~~-~-~~~~~~~~~~  156 (286)
T 2zcu_A           96 ------VKFIAYTSLLHAD-T--SPLGLADEHIETEKMLAD--------SGIVYTLLRNGWYSENYL-A-SAPAALEHGV  156 (286)
T ss_dssp             ------CCEEEEEEETTTT-T--CCSTTHHHHHHHHHHHHH--------HCSEEEEEEECCBHHHHH-T-THHHHHHHTE
T ss_pred             ------CCEEEEECCCCCC-C--CcchhHHHHHHHHHHHHH--------cCCCeEEEeChHHhhhhH-H-HhHHhhcCCc
Confidence                  4689999998765 2  234799999999988753        269999999998875421 1 1011111100


Q ss_pred             ---hhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHHHHHHhccC
Q 025124          181 ---TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKS  245 (257)
Q Consensus       181 ---~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~~~~~~~  245 (257)
                         ........+.+++|+|++++.++..+.  ..|+.+++.++..+.     ..++...+.+..+++.
T Consensus       157 ~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g~~~~i~~~~~~s-----~~e~~~~i~~~~g~~~  217 (286)
T 2zcu_A          157 FIGAAGDGKIASATRADYAAAAARVISEAG--HEGKVYELAGDSAWT-----LTQLAAELTKQSGKQV  217 (286)
T ss_dssp             EEESCTTCCBCCBCHHHHHHHHHHHHHSSS--CTTCEEEECCSSCBC-----HHHHHHHHHHHHSSCC
T ss_pred             eeccCCCCccccccHHHHHHHHHHHhcCCC--CCCceEEEeCCCcCC-----HHHHHHHHHHHHCCCC
Confidence               001122346789999999999997643  368899999875444     5667777777776653

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.20  E-value=1.9e-10  Score=102.31  Aligned_cols=172  Identities=15%  Similarity=-0.004  Sum_probs=114.1

Q ss_pred             CCCeEEEEccCC------CHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Q 025124           19 GIPAIGLEGDVR------KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALK   92 (257)
Q Consensus        19 ~~~~~~~~~Dls------~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   92 (257)
                      ..++.++.+|++      +.+.++.+++       ++|+|||+||....        +.++..+++|+.++.++++++..
T Consensus       139 ~~~v~~v~~Dl~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~--------~~~~~~~~~Nv~gt~~ll~aa~~  203 (478)
T 4dqv_A          139 ADRLEVVAGDKSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA--------FPYHELFGPNVAGTAELIRIALT  203 (478)
T ss_dssp             TTTEEEEECCTTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB--------SSCCEEHHHHHHHHHHHHHHHTS
T ss_pred             cCceEEEEeECCCcccCCCHHHHHHHHc-------CCCEEEECccccCC--------cCHHHHHHHHHHHHHHHHHHHHh
Confidence            357999999999      5556665554       58999999997543        22345788999999999887743


Q ss_pred             HHHhcCCCCCCCCCCceEEEEcccccccccc----------------------cchhhHHHHHHHHHHHHHHHHHhcCCC
Q 025124           93 YLKKGGRGQASSSSGGIIINISATLHYTATW----------------------YQIHVSAAKAAVDSITRSLALEWGTDY  150 (257)
Q Consensus        93 ~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~----------------------~~~~Y~~sK~a~~~l~~~la~e~~~~~  150 (257)
                          .+        .++||++||...+....                      ....|+.+|.+.+.+++.++.+.    
T Consensus       204 ----~~--------~~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----  267 (478)
T 4dqv_A          204 ----TK--------LKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC----  267 (478)
T ss_dssp             ----SS--------CCCEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH----
T ss_pred             ----CC--------CCeEEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh----
Confidence                22        35799999975432211                      01349999999999999988764    


Q ss_pred             CeEEEEEecCcccCCCCCCCC-ChH----HHHHHhhh--hcc---------------CCCCCCHHhHHHHHHHhccCCC-
Q 025124          151 AIRVNGIAPGPIKDTAGVSKL-APE----EIRSKATD--YMA---------------AYKFGEKWDIAMAALYLASDAG-  207 (257)
Q Consensus       151 gi~v~~v~Pg~v~t~~~~~~~-~~~----~~~~~~~~--~~~---------------~~~~~~~~dva~~~~~l~~~~~-  207 (257)
                      |++++.++||.+..+...... ...    .+......  ..|               ...+...+|+|++++.++.... 
T Consensus       268 gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~  347 (478)
T 4dqv_A          268 ALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAG  347 (478)
T ss_dssp             CCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-
T ss_pred             CCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhccc
Confidence            699999999999875321111 111    11111111  111               1134678999999999886421 


Q ss_pred             -CcccCcEEEecCCc
Q 025124          208 -KYVNGNTLIVDGGN  221 (257)
Q Consensus       208 -~~~~G~~~~~dgg~  221 (257)
                       ....|+++++.++.
T Consensus       348 ~~~~~~~~ynv~~~~  362 (478)
T 4dqv_A          348 SSLAGFATYHVMNPH  362 (478)
T ss_dssp             CCCCSEEEEEESCCC
T ss_pred             CCCCCCceEEecCCC
Confidence             12357788887764

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.18  E-value=2.1e-12  Score=102.44  Aligned_cols=158  Identities=14%  Similarity=0.070  Sum_probs=106.5

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      ++.++.+|++|.+++.+++         +|++||++|....      +.++++..+++|+.++..+++++.+    .+  
T Consensus        47 ~~~~~~~D~~~~~~~~~~~---------~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~--  105 (215)
T 2a35_A           47 RLDNPVGPLAELLPQLDGS---------IDTAFCCLGTTIK------EAGSEEAFRAVDFDLPLAVGKRALE----MG--  105 (215)
T ss_dssp             TEECCBSCHHHHGGGCCSC---------CSEEEECCCCCHH------HHSSHHHHHHHHTHHHHHHHHHHHH----TT--
T ss_pred             CceEEeccccCHHHHHHhh---------hcEEEECeeeccc------cCCCHHHHHHhhHHHHHHHHHHHHH----cC--
Confidence            3556678887776655443         8999999996432      2456778999999999999888754    23  


Q ss_pred             CCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeE-EEEEecCcccCCCCCCCCChHHHHHH
Q 025124          101 QASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIR-VNGIAPGPIKDTAGVSKLAPEEIRSK  179 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~-v~~v~Pg~v~t~~~~~~~~~~~~~~~  179 (257)
                            .++||++||......  ....|+.+|.+++.+++.        .|++ ++.++||.+.++.....+.. .....
T Consensus       106 ------~~~~v~~Ss~~~~~~--~~~~y~~sK~~~e~~~~~--------~~~~~~~~vrp~~v~g~~~~~~~~~-~~~~~  168 (215)
T 2a35_A          106 ------ARHYLVVSALGADAK--SSIFYNRVKGELEQALQE--------QGWPQLTIARPSLLFGPREEFRLAE-ILAAP  168 (215)
T ss_dssp             ------CCEEEEECCTTCCTT--CSSHHHHHHHHHHHHHTT--------SCCSEEEEEECCSEESTTSCEEGGG-GTTCC
T ss_pred             ------CCEEEEECCcccCCC--CccHHHHHHHHHHHHHHH--------cCCCeEEEEeCceeeCCCCcchHHH-HHHHh
Confidence                  468999999876543  345799999999988763        3788 99999999998753211100 00000


Q ss_pred             hhhhc-cCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCC
Q 025124          180 ATDYM-AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG  220 (257)
Q Consensus       180 ~~~~~-~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg  220 (257)
                      ..... ....+.+++|+|++++.++..+.    +..+++.++
T Consensus       169 ~~~~~~~~~~~i~~~Dva~~~~~~~~~~~----~~~~~i~~~  206 (215)
T 2a35_A          169 IARILPGKYHGIEACDLARALWRLALEEG----KGVRFVESD  206 (215)
T ss_dssp             CC----CHHHHHHHHHHHHHHHHHHTCCC----SEEEEEEHH
T ss_pred             hhhccCCCcCcEeHHHHHHHHHHHHhcCC----CCceEEcHH
Confidence            00000 01134678999999999997642    567777654

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.17  E-value=3.4e-10  Score=97.19  Aligned_cols=195  Identities=13%  Similarity=-0.050  Sum_probs=134.5

Q ss_pred             HHHHHHHHhcCCCeEEEEccC-CCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHH
Q 025124            9 RSAVAALHSLGIPAIGLEGDV-RKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC   87 (257)
Q Consensus         9 ~~~~~~l~~~~~~~~~~~~Dl-s~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~   87 (257)
                      ..+++.|.+.|. +.++.+|. +|.++++.+++       ++|+|||+||.....        +.+..+++|+.++..++
T Consensus        14 ~~l~~~L~~~g~-~~v~~~d~~~d~~~l~~~~~-------~~d~Vih~a~~~~~~--------~~~~~~~~n~~~~~~l~   77 (369)
T 3st7_A           14 KNLKADLTSTTD-HHIFEVHRQTKEEELESALL-------KADFIVHLAGVNRPE--------HDKEFSLGNVSYLDHVL   77 (369)
T ss_dssp             HHHHHHHHHHCC-CEEEECCTTCCHHHHHHHHH-------HCSEEEECCCSBCTT--------CSTTCSSSCCBHHHHHH
T ss_pred             HHHHHHHHhCCC-CEEEEECCCCCHHHHHHHhc-------cCCEEEECCcCCCCC--------CHHHHHHHHHHHHHHHH
Confidence            456667766643 46788999 99999988886       489999999965432        22346778999988888


Q ss_pred             HHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCC
Q 025124           88 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG  167 (257)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~  167 (257)
                      +++.    +.+.       ..++|++||.....    ...|+.+|.+.+.+++.++.+.    |+++..++|+.+..+..
T Consensus        78 ~a~~----~~~~-------~~~~v~~Ss~~~~~----~~~Y~~sK~~~E~~~~~~~~~~----g~~~~i~R~~~v~G~~~  138 (369)
T 3st7_A           78 DILT----RNTK-------KPAILLSSSIQATQ----DNPYGESKLQGEQLLREYAEEY----GNTVYIYRWPNLFGKWC  138 (369)
T ss_dssp             HHHT----TCSS-------CCEEEEEEEGGGGS----CSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECEEECTTC
T ss_pred             HHHH----HhCC-------CCeEEEeCchhhcC----CCCchHHHHHHHHHHHHHHHHh----CCCEEEEECCceeCCCC
Confidence            7763    2220       24899999987654    5689999999999999998875    58899999999987754


Q ss_pred             CCCCC--hHHHHHHhhhhccC--------CCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHH
Q 025124          168 VSKLA--PEEIRSKATDYMAA--------YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQL  237 (257)
Q Consensus       168 ~~~~~--~~~~~~~~~~~~~~--------~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~  237 (257)
                      ...+.  -..+........+.        ..+..++|+|++++.++..... ..|..+++.+|..+.     ..++...+
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~-~~~~~~~i~~~~~~s-----~~e~~~~~  212 (369)
T 3st7_A          139 KPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPT-IENGVPTVPNVFKVT-----LGEIVDLL  212 (369)
T ss_dssp             CTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCCC-EETTEECCSCCEEEE-----HHHHHHHH
T ss_pred             CCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCcc-cCCceEEeCCCCcee-----HHHHHHHH
Confidence            32211  12222222222221        1245689999999999976533 237888888775554     45666666


Q ss_pred             HHHHhcc
Q 025124          238 SRAVERK  244 (257)
Q Consensus       238 ~~~~~~~  244 (257)
                      .+....+
T Consensus       213 ~~~~g~~  219 (369)
T 3st7_A          213 YKFKQSR  219 (369)
T ss_dssp             HHHHHHH
T ss_pred             HHHhCCC
Confidence            6665554

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.16  E-value=2.8e-10  Score=95.46  Aligned_cols=206  Identities=11%  Similarity=0.009  Sum_probs=127.8

Q ss_pred             HHHHHHHHhcCCCeEEEEccCC----CHHHHHH-----HHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            9 RSAVAALHSLGIPAIGLEGDVR----KREDAVR-----VVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         9 ~~~~~~l~~~~~~~~~~~~Dls----~~~~~~~-----~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      ..+++.|.+.|.++..+.-+-.    ..+.+..     -+..+..++.++|+|||+|+........+    .....++ |
T Consensus        21 ~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~d~vi~~a~~~~~~~~~~----~~~~~~~-n   95 (321)
T 3vps_A           21 GHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLSDVRLVYHLASHKSVPRSFK----QPLDYLD-N   95 (321)
T ss_dssp             HHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHTTEEEEEECCCCCCHHHHTT----STTTTHH-H
T ss_pred             HHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccccCCEEEECCccCChHHHHh----CHHHHHH-H
Confidence            4567777777766665532211    1111100     01112223337999999999654211111    1122455 8


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccccc-----------ccchhhHHHHHHHHHHHHHHHHHhcC
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-----------WYQIHVSAAKAAVDSITRSLALEWGT  148 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~-----------~~~~~Y~~sK~a~~~l~~~la~e~~~  148 (257)
                      +.++.++++++...    +        -++||++||...+...           .+...|+.+|.+.+.+++.++.+   
T Consensus        96 ~~~~~~ll~a~~~~----~--------v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---  160 (321)
T 3vps_A           96 VDSGRHLLALCTSV----G--------VPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVAGAHQRA---  160 (321)
T ss_dssp             HHHHHHHHHHHHHH----T--------CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHS---
T ss_pred             HHHHHHHHHHHHHc----C--------CCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---
Confidence            99998888887553    2        3679999998654332           23568999999999999998875   


Q ss_pred             CCCe-EEEEEecCcccCCCCCCCCChHHHHHHhhhhcc---------CCCCCCHHhHHHHHHHhccCCCCcccCcEEEec
Q 025124          149 DYAI-RVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA---------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVD  218 (257)
Q Consensus       149 ~~gi-~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~d  218 (257)
                       .|+ +++.++|+.+..+..........+........+         ...+.+++|+|++++.++.....   | .+++.
T Consensus       161 -~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~---g-~~~i~  235 (321)
T 3vps_A          161 -SVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLP---S-VVNFG  235 (321)
T ss_dssp             -SSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCCC---S-EEEES
T ss_pred             -cCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCCC---C-eEEec
Confidence             368 999999999998754432212222222222211         12346899999999999986543   7 99998


Q ss_pred             CCcccCCCCCCcHHHHHHHHHHHhccC
Q 025124          219 GGNWLSNPRDLPKEAVNQLSRAVERKS  245 (257)
Q Consensus       219 gg~~~~~~~~~~~~~~~~~~~~~~~~~  245 (257)
                      +|..+.     ..++...+. ....+.
T Consensus       236 ~~~~~s-----~~e~~~~i~-~~g~~~  256 (321)
T 3vps_A          236 SGQSLS-----VNDVIRILQ-ATSPAA  256 (321)
T ss_dssp             CSCCEE-----HHHHHHHHH-TTCTTC
T ss_pred             CCCccc-----HHHHHHHHH-HhCCCC
Confidence            886544     466666666 655543

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.02  E-value=2.9e-09  Score=87.93  Aligned_cols=170  Identities=10%  Similarity=-0.061  Sum_probs=111.0

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--c
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKK--G   97 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~   97 (257)
                      .++.++.+|++|.+            +.++|+|||+|+.....       +..              .+.++..+.+  .
T Consensus        47 ~~~~~~~~D~~d~~------------~~~~d~vi~~a~~~~~~-------~~~--------------~~~l~~a~~~~~~   93 (286)
T 3ius_A           47 SGAEPLLWPGEEPS------------LDGVTHLLISTAPDSGG-------DPV--------------LAALGDQIAARAA   93 (286)
T ss_dssp             TTEEEEESSSSCCC------------CTTCCEEEECCCCBTTB-------CHH--------------HHHHHHHHHHTGG
T ss_pred             CCCeEEEecccccc------------cCCCCEEEECCCccccc-------cHH--------------HHHHHHHHHhhcC
Confidence            35888999999833            45899999999954321       010              1333444444  2


Q ss_pred             CCCCCCCCCCceEEEEccccccccc-----------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCC
Q 025124           98 GRGQASSSSGGIIINISATLHYTAT-----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA  166 (257)
Q Consensus        98 ~~~~~~~~~~g~ii~iss~~~~~~~-----------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~  166 (257)
                      +        -+++|++||...+...           .+...|+.+|.+.+.+++.+       .|++++.++|+.+..+.
T Consensus        94 ~--------~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~-------~~~~~~ilRp~~v~G~~  158 (286)
T 3ius_A           94 Q--------FRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAV-------PNLPLHVFRLAGIYGPG  158 (286)
T ss_dssp             G--------CSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHS-------TTCCEEEEEECEEEBTT
T ss_pred             C--------ceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhh-------cCCCEEEEeccceECCC
Confidence            2        4789999997654221           12347999999999988866       36899999999998774


Q ss_pred             CCCC--CChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHHHHHHhcc
Q 025124          167 GVSK--LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERK  244 (257)
Q Consensus       167 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~~~~~~  244 (257)
                      ....  ....... ..........+.+.+|++++++.++....   .|+.+++.+|..+.     ..++.+.+.+..+.+
T Consensus       159 ~~~~~~~~~~~~~-~~~~~~~~~~~i~v~Dva~a~~~~~~~~~---~g~~~~i~~~~~~s-----~~e~~~~i~~~~g~~  229 (286)
T 3ius_A          159 RGPFSKLGKGGIR-RIIKPGQVFSRIHVEDIAQVLAASMARPD---PGAVYNVCDDEPVP-----PQDVIAYAAELQGLP  229 (286)
T ss_dssp             BSSSTTSSSSCCC-EEECTTCCBCEEEHHHHHHHHHHHHHSCC---TTCEEEECCSCCBC-----HHHHHHHHHHHHTCC
T ss_pred             chHHHHHhcCCcc-ccCCCCcccceEEHHHHHHHHHHHHhCCC---CCCEEEEeCCCCcc-----HHHHHHHHHHHcCCC
Confidence            3211  0000000 00000112345678999999999997654   57899998876554     677888888888776


Q ss_pred             CC
Q 025124          245 SR  246 (257)
Q Consensus       245 ~~  246 (257)
                      ..
T Consensus       230 ~~  231 (286)
T 3ius_A          230 LP  231 (286)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.00  E-value=4.3e-09  Score=87.09  Aligned_cols=173  Identities=14%  Similarity=0.011  Sum_probs=107.8

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|++|++++..+++       ++|+|||++|.....              ..|+.+.    +.+++.+++.+ 
T Consensus        44 ~~v~~~~~D~~d~~~l~~~~~-------~~d~vi~~a~~~~~~--------------~~~~~~~----~~l~~aa~~~g-   97 (289)
T 3e48_A           44 GKVSVRQLDYFNQESMVEAFK-------GMDTVVFIPSIIHPS--------------FKRIPEV----ENLVYAAKQSG-   97 (289)
T ss_dssp             TTBEEEECCTTCHHHHHHHTT-------TCSEEEECCCCCCSH--------------HHHHHHH----HHHHHHHHHTT-
T ss_pred             CCCEEEEcCCCCHHHHHHHHh-------CCCEEEEeCCCCccc--------------hhhHHHH----HHHHHHHHHcC-
Confidence            357788999999998887764       789999999854321              1244444    44445555544 


Q ss_pred             CCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHHHH
Q 025124          100 GQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK  179 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~  179 (257)
                             -++||++||.+.....+    |..++..     ..+...+. ..|++++.++||++.++...  . -......
T Consensus        98 -------v~~iv~~Ss~~~~~~~~----~~~~~~~-----~~~e~~~~-~~g~~~~ilrp~~~~~~~~~--~-~~~~~~~  157 (289)
T 3e48_A           98 -------VAHIIFIGYYADQHNNP----FHMSPYF-----GYASRLLS-TSGIDYTYVRMAMYMDPLKP--Y-LPELMNM  157 (289)
T ss_dssp             -------CCEEEEEEESCCSTTCC----STTHHHH-----HHHHHHHH-HHCCEEEEEEECEESTTHHH--H-HHHHHHH
T ss_pred             -------CCEEEEEcccCCCCCCC----CccchhH-----HHHHHHHH-HcCCCEEEEeccccccccHH--H-HHHHHHC
Confidence                   47899999975433322    2222211     12222233 45799999999999876320  0 0011111


Q ss_pred             hhhhccCCC----CCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHHHHHHhccCC
Q 025124          180 ATDYMAAYK----FGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKSR  246 (257)
Q Consensus       180 ~~~~~~~~~----~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (257)
                      .....+.+.    +.+++|+|++++.++......  |+.+++. |..+.     ..++.+.+.+..+++.+
T Consensus       158 ~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~--g~~~~~~-~~~~s-----~~e~~~~~~~~~g~~~~  220 (289)
T 3e48_A          158 HKLIYPAGDGRINYITRNDIARGVIAIIKNPDTW--GKRYLLS-GYSYD-----MKELAAILSEASGTEIK  220 (289)
T ss_dssp             TEECCCCTTCEEEEECHHHHHHHHHHHHHCGGGT--TCEEEEC-CEEEE-----HHHHHHHHHHHHTSCCE
T ss_pred             CCEecCCCCceeeeEEHHHHHHHHHHHHcCCCcC--CceEEeC-CCcCC-----HHHHHHHHHHHHCCcee
Confidence            111112222    578999999999999875443  8899998 76665     56778888888777543

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=98.92  E-value=1.3e-09  Score=90.74  Aligned_cols=179  Identities=9%  Similarity=-0.069  Sum_probs=111.9

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      .+.++.+|++|++++..+++       ++|+|||+++.....            ..+.|+.+.    +.+++.+++.+  
T Consensus        52 ~~~~~~~D~~d~~~l~~~~~-------~~d~vi~~a~~~~~~------------~~~~~~~~~----~~~~~aa~~~g--  106 (299)
T 2wm3_A           52 GAEVVQGDQDDQVIMELALN-------GAYATFIVTNYWESC------------SQEQEVKQG----KLLADLARRLG--  106 (299)
T ss_dssp             TCEEEECCTTCHHHHHHHHT-------TCSEEEECCCHHHHT------------CHHHHHHHH----HHHHHHHHHHT--
T ss_pred             CCEEEEecCCCHHHHHHHHh-------cCCEEEEeCCCCccc------------cchHHHHHH----HHHHHHHHHcC--
Confidence            47889999999998887765       689999999842110            122344444    44444555544  


Q ss_pred             CCCCCCCceEEEEcccccccc--cccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHHH
Q 025124          101 QASSSSGGIIINISATLHYTA--TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS  178 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~~--~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~  178 (257)
                            -++||++|+......  ......|..+|.+++.+++.        .|++++.++||++.++....... .....
T Consensus       107 ------v~~iv~~S~~~~~~~~~~~~~~~y~~sK~~~e~~~~~--------~gi~~~ilrp~~~~~~~~~~~~~-~~~~~  171 (299)
T 2wm3_A          107 ------LHYVVYSGLENIKKLTAGRLAAAHFDGKGEVEEYFRD--------IGVPMTSVRLPCYFENLLSHFLP-QKAPD  171 (299)
T ss_dssp             ------CSEEEECCCCCHHHHTTTSCCCHHHHHHHHHHHHHHH--------HTCCEEEEECCEEGGGGGTTTCC-EECTT
T ss_pred             ------CCEEEEEcCccccccCCCcccCchhhHHHHHHHHHHH--------CCCCEEEEeecHHhhhchhhcCC-cccCC
Confidence                  478999666443211  11246799999999988763        26899999999998764321110 00000


Q ss_pred             H------hhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHHHHHHhccCC
Q 025124          179 K------ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKSR  246 (257)
Q Consensus       179 ~------~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (257)
                      .      .........+.+++|+|+.+..++..+.. ..|+.+.+.|. .+.     ..++...+.+..+++.+
T Consensus       172 g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~-~~g~~~~~~g~-~~s-----~~e~~~~~~~~~g~~~~  238 (299)
T 2wm3_A          172 GKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEK-YVGQNIGLSTC-RHT-----AEEYAALLTKHTRKVVH  238 (299)
T ss_dssp             SSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHH-HTTCEEECCSE-EEC-----HHHHHHHHHHHHSSCEE
T ss_pred             CCEEEEEecCCCCccceecHHHHHHHHHHHHcChhh-hCCeEEEeeec-cCC-----HHHHHHHHHHHHCCCce
Confidence            0      00001112356899999999999975322 36888888753 333     56777778888777654

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=98.86  E-value=2.2e-07  Score=79.18  Aligned_cols=188  Identities=12%  Similarity=0.013  Sum_probs=118.7

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      ++.++.+|++|.+++.++++.+    +++|+|||+||...         ++.+..+++|+.++.++++++.+...  +  
T Consensus        49 ~~~~~~~Dl~d~~~~~~~~~~~----~~~d~vih~a~~~~---------~~~~~~~~~n~~~~~~l~~a~~~~~~--~--  111 (364)
T 2v6g_A           49 PINYVQCDISDPDDSQAKLSPL----TDVTHVFYVTWANR---------STEQENCEANSKMFRNVLDAVIPNCP--N--  111 (364)
T ss_dssp             CCEEEECCTTSHHHHHHHHTTC----TTCCEEEECCCCCC---------SSHHHHHHHHHHHHHHHHHHHTTTCT--T--
T ss_pred             ceEEEEeecCCHHHHHHHHhcC----CCCCEEEECCCCCc---------chHHHHHHHhHHHHHHHHHHHHHhcc--c--
Confidence            5778899999999887776532    24999999999642         23567889999999999998865311  1  


Q ss_pred             CCCCCCCceEE-------EEccccccccc--------------ccchhhHHHHHHHHHHHHHHHHHhcCCCC-eEEEEEe
Q 025124          101 QASSSSGGIII-------NISATLHYTAT--------------WYQIHVSAAKAAVDSITRSLALEWGTDYA-IRVNGIA  158 (257)
Q Consensus       101 ~~~~~~~g~ii-------~iss~~~~~~~--------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~g-i~v~~v~  158 (257)
                            -.++|       ++||...+...              +....|.    +.+.+++.++.    .+| ++++.++
T Consensus       112 ------~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~~~~y~----~~E~~~~~~~~----~~~~~~~~ilR  177 (364)
T 2v6g_A          112 ------LKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYY----DLEDIMLEEVE----KKEGLTWSVHR  177 (364)
T ss_dssp             ------CCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSSCCHHH----HHHHHHHHHHT----TSTTCEEEEEE
T ss_pred             ------cceEEeccCceEEEechhhccccccCCCCCCccccCCccchhhH----HHHHHHHHHhh----cCCCceEEEEC
Confidence                  24565       67776543211              1123452    33444444432    345 9999999


Q ss_pred             cCcccCCCCCCCCCh--HH-HHHHh--hhhccC------------CCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          159 PGPIKDTAGVSKLAP--EE-IRSKA--TDYMAA------------YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       159 Pg~v~t~~~~~~~~~--~~-~~~~~--~~~~~~------------~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                      |+.+..+........  .. .....  ....+.            ..+.+.+|+|++++.++....  ..|+.+++.++.
T Consensus       178 p~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~~--~~g~~~ni~~~~  255 (364)
T 2v6g_A          178 PGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDPY--AKNEAFNVSNGD  255 (364)
T ss_dssp             ESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCGG--GTTEEEEECCSC
T ss_pred             CCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHHHHHHHHHHhCCC--CCCceEEecCCC
Confidence            999998754322111  11 11212  111111            122345889999999986432  368899998875


Q ss_pred             ccCCCCCCcHHHHHHHHHHHhccCC
Q 025124          222 WLSNPRDLPKEAVNQLSRAVERKSR  246 (257)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~  246 (257)
                      .+.     ..++...+.+..+.+..
T Consensus       256 ~~s-----~~e~~~~i~~~~g~~~~  275 (364)
T 2v6g_A          256 VFK-----WKHFWKVLAEQFGVECG  275 (364)
T ss_dssp             CBC-----HHHHHHHHHHHHTCCBC
T ss_pred             cCC-----HHHHHHHHHHHhCCCCC
Confidence            443     57788888888877654

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=98.86  E-value=8.7e-09  Score=88.00  Aligned_cols=178  Identities=16%  Similarity=0.121  Sum_probs=111.8

Q ss_pred             CCeEEEEcc-CCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Q 025124           20 IPAIGLEGD-VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (257)
Q Consensus        20 ~~~~~~~~D-ls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (257)
                      .++.++.+| ++|.+++.++++       .+|++|||++....               +.|..+ .++++    .+.+.+
T Consensus        51 ~~v~~v~~D~l~d~~~l~~~~~-------~~d~Vi~~a~~~~~---------------~~~~~~-~~l~~----aa~~~g  103 (352)
T 1xgk_A           51 PNVTLFQGPLLNNVPLMDTLFE-------GAHLAFINTTSQAG---------------DEIAIG-KDLAD----AAKRAG  103 (352)
T ss_dssp             TTEEEEESCCTTCHHHHHHHHT-------TCSEEEECCCSTTS---------------CHHHHH-HHHHH----HHHHHS
T ss_pred             CCcEEEECCccCCHHHHHHHHh-------cCCEEEEcCCCCCc---------------HHHHHH-HHHHH----HHHHcC
Confidence            358889999 999998887764       58999999875310               124333 34444    444431


Q ss_pred             CCCCCCCCCceEEEEcccc-cccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCC---ChH
Q 025124           99 RGQASSSSGGIIINISATL-HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---APE  174 (257)
Q Consensus        99 ~~~~~~~~~g~ii~iss~~-~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~  174 (257)
                      .       -++||++||.. ...+......|+.+|.+.+.+++.        .|++++.|+||++-+. .....   ...
T Consensus       104 ~-------v~~~V~~SS~~~~~~~~~~~~~y~~sK~~~E~~~~~--------~gi~~~ivrpg~~g~~-~~~~~~~~~~~  167 (352)
T 1xgk_A          104 T-------IQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQ--------LGLPSTFVYAGIYNNN-FTSLPYPLFQM  167 (352)
T ss_dssp             C-------CSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHHHT--------SSSCEEEEEECEEGGG-CBSSSCSSCBE
T ss_pred             C-------ccEEEEeCCccccccCCCCCccHHHHHHHHHHHHHH--------cCCCEEEEecceecCC-chhcccccccc
Confidence            0       25899999986 344444557899999999988864        2689999999977532 21110   000


Q ss_pred             H-HHHHh------hhhccCCCCCCH-HhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHHHHHHhccCC
Q 025124          175 E-IRSKA------TDYMAAYKFGEK-WDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKSR  246 (257)
Q Consensus       175 ~-~~~~~------~~~~~~~~~~~~-~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (257)
                      . .....      ........+.++ +|+|++++.++........|+.+.+.++ .+.     ..++.+.+.+..+++.+
T Consensus       168 ~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~~~-~~s-----~~e~~~~i~~~~G~~~~  241 (352)
T 1xgk_A          168 ELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFE-TLS-----PVQVCAAFSRALNRRVT  241 (352)
T ss_dssp             EECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECSE-EEC-----HHHHHHHHHHHHTSCEE
T ss_pred             cccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCCeEEEEecC-CCC-----HHHHHHHHHHHHCCCCc
Confidence            0 00000      000011124677 8999999999975433346889988854 233     57778888888777644

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=98.81  E-value=2.3e-08  Score=83.33  Aligned_cols=171  Identities=14%  Similarity=0.120  Sum_probs=100.9

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      .+.++.+|++|.+++..+++       ++|+|||++|...                   +.+...+++++    ++.+. 
T Consensus        56 ~v~~v~~D~~d~~~l~~~~~-------~~d~vi~~a~~~~-------------------~~~~~~l~~aa----~~~g~-  104 (307)
T 2gas_A           56 GVILLEGDINDHETLVKAIK-------QVDIVICAAGRLL-------------------IEDQVKIIKAI----KEAGN-  104 (307)
T ss_dssp             TCEEEECCTTCHHHHHHHHT-------TCSEEEECSSSSC-------------------GGGHHHHHHHH----HHHCC-
T ss_pred             CCEEEEeCCCCHHHHHHHHh-------CCCEEEECCcccc-------------------cccHHHHHHHH----HhcCC-
Confidence            57889999999998887765       6999999999642                   22333444443    33320 


Q ss_pred             CCCCCCCceEEEEcccccc-----cccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCC---
Q 025124          101 QASSSSGGIIINISATLHY-----TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---  172 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~-----~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~---  172 (257)
                            -+++| .|+.+..     ...+....| .+|.+++.+++.        .|++++.++||++.+........   
T Consensus       105 ------v~~~v-~S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~--------~~i~~~~lrp~~~~~~~~~~~~~~~~  168 (307)
T 2gas_A          105 ------VKKFF-PSEFGLDVDRHDAVEPVRQVF-EEKASIRRVIEA--------EGVPYTYLCCHAFTGYFLRNLAQLDA  168 (307)
T ss_dssp             ------CSEEE-CSCCSSCTTSCCCCTTHHHHH-HHHHHHHHHHHH--------HTCCBEEEECCEETTTTGGGTTCTTC
T ss_pred             ------ceEEe-ecccccCcccccCCCcchhHH-HHHHHHHHHHHH--------cCCCeEEEEcceeecccccccccccc
Confidence                  24566 2433211     112335678 999998887752        25888999999998653211100   


Q ss_pred             ---hHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecC-CcccCCCCCCcHHHHHHHHHHHhccC
Q 025124          173 ---PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDG-GNWLSNPRDLPKEAVNQLSRAVERKS  245 (257)
Q Consensus       173 ---~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dg-g~~~~~~~~~~~~~~~~~~~~~~~~~  245 (257)
                         ................+.+++|+|+.++.++.++.  ..|+.+.+.| |..+.     ..++...+.+..+++.
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~~~~~~~~~s-----~~e~~~~~~~~~g~~~  238 (307)
T 2gas_A          169 TDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPN--TLNKAVHIRLPKNYLT-----QNEVIALWEKKIGKTL  238 (307)
T ss_dssp             SSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGG--GTTEEEECCCGGGEEE-----HHHHHHHHHHHHTSCC
T ss_pred             ccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCcc--ccCceEEEeCCCCcCC-----HHHHHHHHHHHhCCCC
Confidence               00000000011112245789999999999997543  2366676654 33333     4566666666666554

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=98.73  E-value=1.7e-07  Score=84.10  Aligned_cols=197  Identities=16%  Similarity=0.090  Sum_probs=117.2

Q ss_pred             HHHHHHHHhcCCCeEEE----------EccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHH
Q 025124            9 RSAVAALHSLGIPAIGL----------EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI   78 (257)
Q Consensus         9 ~~~~~~l~~~~~~~~~~----------~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~   78 (257)
                      ..+++.|.+.|.++..+          .+|+.+.         ..+.+.++|+|||+||.....   ..+.+..+..+++
T Consensus       161 ~~l~~~L~~~G~~V~~l~R~~~~~~~v~~d~~~~---------~~~~l~~~D~Vih~A~~~~~~---~~~~~~~~~~~~~  228 (516)
T 3oh8_A          161 RALTAQLQTGGHEVIQLVRKEPKPGKRFWDPLNP---------ASDLLDGADVLVHLAGEPIFG---RFNDSHKEAIRES  228 (516)
T ss_dssp             HHHHHHHHHTTCEEEEEESSSCCTTCEECCTTSC---------CTTTTTTCSEEEECCCC--------CCGGGHHHHHHH
T ss_pred             HHHHHHHHHCCCEEEEEECCCCCccceeecccch---------hHHhcCCCCEEEECCCCcccc---ccchhHHHHHHHH
Confidence            45666776666655543          4555432         123345899999999965433   3456677889999


Q ss_pred             HhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccccc-----------ccchhhHHHHHHHHHHHHHHHHHhc
Q 025124           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-----------WYQIHVSAAKAAVDSITRSLALEWG  147 (257)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~-----------~~~~~Y~~sK~a~~~l~~~la~e~~  147 (257)
                      |+.++.++++++.   .+.+        .++||++||.+.+...           .+...|+.+|...+.+.+..    .
T Consensus       229 Nv~gt~~ll~a~a---~~~~--------~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~y~~~~~~~E~~~~~~----~  293 (516)
T 3oh8_A          229 RVLPTKFLAELVA---ESTQ--------CTTMISASAVGFYGHDRGDEILTEESESGDDFLAEVCRDWEHATAPA----S  293 (516)
T ss_dssp             THHHHHHHHHHHH---HCSS--------CCEEEEEEEGGGGCSEEEEEEECTTSCCCSSHHHHHHHHHHHTTHHH----H
T ss_pred             HHHHHHHHHHHHH---hcCC--------CCEEEEeCcceEecCCCCCCccCCCCCCCcChHHHHHHHHHHHHHHH----H
Confidence            9999999999743   2222        4689999997654311           13346788887776664432    3


Q ss_pred             CCCCeEEEEEecCcccCCCCCCCCChHHHHHHhhhh--------ccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecC
Q 025124          148 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY--------MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDG  219 (257)
Q Consensus       148 ~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dg  219 (257)
                       ..|++++.++||.+.++..  . ....+.......        .....+++++|++++++.++....  ..| .+++.+
T Consensus       294 -~~gi~~~ilRp~~v~Gp~~--~-~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~--~~g-~~ni~~  366 (516)
T 3oh8_A          294 -DAGKRVAFIRTGVALSGRG--G-MLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQ--ISG-PINAVA  366 (516)
T ss_dssp             -HTTCEEEEEEECEEEBTTB--S-HHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHHHHCTT--CCE-EEEESC
T ss_pred             -hCCCCEEEEEeeEEECCCC--C-hHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHHHhCcc--cCC-cEEEEC
Confidence             4589999999999998742  1 011111111111        111235678999999999997543  234 677776


Q ss_pred             CcccCCCCCCcHHHHHHHHHHHhcc
Q 025124          220 GNWLSNPRDLPKEAVNQLSRAVERK  244 (257)
Q Consensus       220 g~~~~~~~~~~~~~~~~~~~~~~~~  244 (257)
                      +..+.     ..++.+.|.+..+++
T Consensus       367 ~~~~s-----~~el~~~i~~~~g~~  386 (516)
T 3oh8_A          367 PNPVS-----NADMTKILATSMHRP  386 (516)
T ss_dssp             SCCEE-----HHHHHHHTTC-----
T ss_pred             CCCCC-----HHHHHHHHHHHhCCC
Confidence            64433     455555555555543

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=98.70  E-value=6.9e-08  Score=82.00  Aligned_cols=176  Identities=15%  Similarity=0.098  Sum_probs=110.8

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|++|.+++.+++++.     ++|+|||+++..                   |+.+..++++++...-   . 
T Consensus        60 ~~v~~~~~Dl~d~~~l~~~~~~~-----~~d~Vi~~a~~~-------------------n~~~~~~l~~aa~~~g---~-  111 (346)
T 3i6i_A           60 KGAIIVYGLINEQEAMEKILKEH-----EIDIVVSTVGGE-------------------SILDQIALVKAMKAVG---T-  111 (346)
T ss_dssp             TTCEEEECCTTCHHHHHHHHHHT-----TCCEEEECCCGG-------------------GGGGHHHHHHHHHHHC---C-
T ss_pred             CCcEEEEeecCCHHHHHHHHhhC-----CCCEEEECCchh-------------------hHHHHHHHHHHHHHcC---C-
Confidence            46888999999999998888753     799999999962                   6777777777765431   0 


Q ss_pred             CCCCCCCCceEEEEccccccc----ccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHH
Q 025124          100 GQASSSSGGIIINISATLHYT----ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE  175 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~----~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~  175 (257)
                             -.++++ |+.+...    +......|+.+|.+++.+.+.        .|++++.++||++.............
T Consensus       112 -------v~~~v~-S~~g~~~~e~~~~~p~~~y~~sK~~~e~~l~~--------~g~~~tivrpg~~~g~~~~~~~~~~~  175 (346)
T 3i6i_A          112 -------IKRFLP-SEFGHDVNRADPVEPGLNMYREKRRVRQLVEE--------SGIPFTYICCNSIASWPYYNNIHPSE  175 (346)
T ss_dssp             -------CSEEEC-SCCSSCTTTCCCCTTHHHHHHHHHHHHHHHHH--------TTCCBEEEECCEESSCCCSCC-----
T ss_pred             -------ceEEee-cccCCCCCccCcCCCcchHHHHHHHHHHHHHH--------cCCCEEEEEecccccccCcccccccc
Confidence                   134554 5433221    123456899999998877763        36889999999987643211110000


Q ss_pred             ------HHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecC-CcccCCCCCCcHHHHHHHHHHHhccCC
Q 025124          176 ------IRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDG-GNWLSNPRDLPKEAVNQLSRAVERKSR  246 (257)
Q Consensus       176 ------~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dg-g~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (257)
                            .............+.+++|+|+.++.++....  ..|+.+.+.| |..+.     ..++...+.+..+++.+
T Consensus       176 ~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~g~~~~~s-----~~e~~~~~~~~~g~~~~  246 (346)
T 3i6i_A          176 VLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVR--TLNKSVHFRPSCNCLN-----INELASVWEKKIGRTLP  246 (346)
T ss_dssp             CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGG--GTTEEEECCCGGGEEC-----HHHHHHHHHHHHTSCCC
T ss_pred             ccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCcc--ccCeEEEEeCCCCCCC-----HHHHHHHHHHHHCCCCc
Confidence                  00000111112346789999999999997642  3356666653 34444     56677777777766543

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=98.65  E-value=4.8e-08  Score=81.55  Aligned_cols=177  Identities=16%  Similarity=0.103  Sum_probs=104.5

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      ..+.++.+|++|++++.++++       ++|+|||+++.....               .|+.+...+++++    ++.+.
T Consensus        55 ~~~~~~~~D~~d~~~l~~~~~-------~~d~vi~~a~~~~~~---------------~~~~~~~~l~~aa----~~~g~  108 (313)
T 1qyd_A           55 LGAKLIEASLDDHQRLVDALK-------QVDVVISALAGGVLS---------------HHILEQLKLVEAI----KEAGN  108 (313)
T ss_dssp             TTCEEECCCSSCHHHHHHHHT-------TCSEEEECCCCSSSS---------------TTTTTHHHHHHHH----HHSCC
T ss_pred             CCeEEEeCCCCCHHHHHHHHh-------CCCEEEECCccccch---------------hhHHHHHHHHHHH----HhcCC
Confidence            458889999999998887765       699999999965321               1444555555544    33320


Q ss_pred             CCCCCCCCceEEEEcccccccc------cccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCC-
Q 025124          100 GQASSSSGGIIINISATLHYTA------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-  172 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~~------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~-  172 (257)
                             -++||+ |+.+....      .+....| .+|.+++.+.+        ..|++++.++||++.+........ 
T Consensus       109 -------v~~~v~-S~~g~~~~~~~~~~~p~~~~y-~sK~~~e~~~~--------~~g~~~~ilrp~~~~~~~~~~~~~~  171 (313)
T 1qyd_A          109 -------IKRFLP-SEFGMDPDIMEHALQPGSITF-IDKRKVRRAIE--------AASIPYTYVSSNMFAGYFAGSLAQL  171 (313)
T ss_dssp             -------CSEEEC-SCCSSCTTSCCCCCSSTTHHH-HHHHHHHHHHH--------HTTCCBCEEECCEEHHHHTTTSSCT
T ss_pred             -------CceEEe-cCCcCCccccccCCCCCcchH-HHHHHHHHHHH--------hcCCCeEEEEeceeccccccccccc
Confidence                   246764 44332111      1335678 99999888775        236888889998886432110000 


Q ss_pred             ------hHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecC-CcccCCCCCCcHHHHHHHHHHHhccC
Q 025124          173 ------PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDG-GNWLSNPRDLPKEAVNQLSRAVERKS  245 (257)
Q Consensus       173 ------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dg-g~~~~~~~~~~~~~~~~~~~~~~~~~  245 (257)
                            ................+.+++|+|+++..++..+.  ..|+.+.+.| |..+.     ..++...+.+..+++.
T Consensus       172 ~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~~~g~~~~~s-----~~e~~~~~~~~~g~~~  244 (313)
T 1qyd_A          172 DGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQ--TLNKTMYIRPPMNILS-----QKEVIQIWERLSEQNL  244 (313)
T ss_dssp             TCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGG--GSSSEEECCCGGGEEE-----HHHHHHHHHHHHTCCC
T ss_pred             cccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcc--cCCceEEEeCCCCccC-----HHHHHHHHHHhcCCCC
Confidence                  00000000011111235789999999999997542  2366666665 34443     4666777777777654


Q ss_pred             C
Q 025124          246 R  246 (257)
Q Consensus       246 ~  246 (257)
                      +
T Consensus       245 ~  245 (313)
T 1qyd_A          245 D  245 (313)
T ss_dssp             E
T ss_pred             c
Confidence            4

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=98.57  E-value=4.4e-08  Score=82.21  Aligned_cols=172  Identities=13%  Similarity=0.071  Sum_probs=99.0

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      ..+.++.+|++|.+++..+++       ++|+|||+++...                   +.+...+    ++.+.+.+.
T Consensus        56 ~~v~~v~~D~~d~~~l~~a~~-------~~d~vi~~a~~~~-------------------~~~~~~l----~~aa~~~g~  105 (321)
T 3c1o_A           56 MGVTIIEGEMEEHEKMVSVLK-------QVDIVISALPFPM-------------------ISSQIHI----INAIKAAGN  105 (321)
T ss_dssp             TTCEEEECCTTCHHHHHHHHT-------TCSEEEECCCGGG-------------------SGGGHHH----HHHHHHHCC
T ss_pred             CCcEEEEecCCCHHHHHHHHc-------CCCEEEECCCccc-------------------hhhHHHH----HHHHHHhCC
Confidence            358889999999998887765       5899999999532                   2223333    344443320


Q ss_pred             CCCCCCCCceEEEEcccccc-----cccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCC---CC-
Q 025124          100 GQASSSSGGIIINISATLHY-----TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV---SK-  170 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~-----~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~---~~-  170 (257)
                             -++|| .|+.+..     ...+....| .+|.+++.+++.        .|++++.++||++.+....   .. 
T Consensus       106 -------v~~~v-~S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~--------~~~~~~~lrp~~~~~~~~~~~~~~~  168 (321)
T 3c1o_A          106 -------IKRFL-PSDFGCEEDRIKPLPPFESVL-EKKRIIRRAIEA--------AALPYTYVSANCFGAYFVNYLLHPS  168 (321)
T ss_dssp             -------CCEEE-CSCCSSCGGGCCCCHHHHHHH-HHHHHHHHHHHH--------HTCCBEEEECCEEHHHHHHHHHCCC
T ss_pred             -------ccEEe-ccccccCccccccCCCcchHH-HHHHHHHHHHHH--------cCCCeEEEEeceecccccccccccc
Confidence                   14566 3433211     111224578 999999888762        2577788899988643110   00 


Q ss_pred             --CChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecC-CcccCCCCCCcHHHHHHHHHHHhccC
Q 025124          171 --LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDG-GNWLSNPRDLPKEAVNQLSRAVERKS  245 (257)
Q Consensus       171 --~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dg-g~~~~~~~~~~~~~~~~~~~~~~~~~  245 (257)
                        ..................+.+++|+|+++..++..+.  ..|+.+.+.| |..+.     ..++...+.+..+++.
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~--~~g~~~~~~g~~~~~t-----~~e~~~~~~~~~g~~~  239 (321)
T 3c1o_A          169 PHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPR--CCNRIVIYRPPKNIIS-----QNELISLWEAKSGLSF  239 (321)
T ss_dssp             SSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGG--GTTEEEECCCGGGEEE-----HHHHHHHHHHHHTSCC
T ss_pred             ccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCcc--ccCeEEEEeCCCCccc-----HHHHHHHHHHHcCCcc
Confidence              0000000000011112235789999999999997643  2477777765 34443     4556666666666554

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=98.46  E-value=8.7e-08  Score=80.30  Aligned_cols=171  Identities=15%  Similarity=0.152  Sum_probs=96.1

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      .+.++.+|++|.+++..+++       ++|+|||+++...                   +.+...    +++.+++.+. 
T Consensus        59 ~v~~v~~Dl~d~~~l~~a~~-------~~d~vi~~a~~~~-------------------~~~~~~----l~~aa~~~g~-  107 (318)
T 2r6j_A           59 GAIIVKGELDEHEKLVELMK-------KVDVVISALAFPQ-------------------ILDQFK----ILEAIKVAGN-  107 (318)
T ss_dssp             TCEEEECCTTCHHHHHHHHT-------TCSEEEECCCGGG-------------------STTHHH----HHHHHHHHCC-
T ss_pred             CCEEEEecCCCHHHHHHHHc-------CCCEEEECCchhh-------------------hHHHHH----HHHHHHhcCC-
Confidence            47889999999998887765       5899999998531                   122233    3334443320 


Q ss_pred             CCCCCCCceEEEEccccccc-----ccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCC---CCCC
Q 025124          101 QASSSSGGIIINISATLHYT-----ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV---SKLA  172 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~-----~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~---~~~~  172 (257)
                            -++||+ |+.+...     ..+....| .+|.+++.+.+.        .|++++.++||++......   ....
T Consensus       108 ------v~~~v~-S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~--------~~~~~~~lr~~~~~~~~~~~~~~~~~  171 (318)
T 2r6j_A          108 ------IKRFLP-SDFGVEEDRINALPPFEALI-ERKRMIRRAIEE--------ANIPYTYVSANCFASYFINYLLRPYD  171 (318)
T ss_dssp             ------CCEEEC-SCCSSCTTTCCCCHHHHHHH-HHHHHHHHHHHH--------TTCCBEEEECCEEHHHHHHHHHCTTC
T ss_pred             ------CCEEEe-eccccCcccccCCCCcchhH-HHHHHHHHHHHh--------cCCCeEEEEcceehhhhhhhhccccC
Confidence                  245663 4432111     11224578 999998887752        3678888999887632100   0000


Q ss_pred             hHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecC-CcccCCCCCCcHHHHHHHHHHHhccC
Q 025124          173 PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDG-GNWLSNPRDLPKEAVNQLSRAVERKS  245 (257)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dg-g~~~~~~~~~~~~~~~~~~~~~~~~~  245 (257)
                      ................+.+++|+++.+..++..+.  ..|+.+.+.| |..+.     ..++...+.+..+++.
T Consensus       172 ~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~~~g~~~~~s-----~~e~~~~~~~~~g~~~  238 (318)
T 2r6j_A          172 PKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPR--ALNRVVIYRPSTNIIT-----QLELISRWEKKIGKKF  238 (318)
T ss_dssp             CCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGG--GTTEEEECCCGGGEEE-----HHHHHHHHHHHHTCCC
T ss_pred             CCCceEEecCCCceeeEeeHHHHHHHHHHHhcCcc--ccCeEEEecCCCCccC-----HHHHHHHHHHHhCCCC
Confidence            00000000011111235679999999999997543  2356666654 34333     4555666666665543

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=98.44  E-value=1.5e-07  Score=78.42  Aligned_cols=172  Identities=16%  Similarity=0.068  Sum_probs=97.7

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      ..+.++.+|++|.+++.++++       ++|+|||+++...                   +.+...++++    +++.+.
T Consensus        56 ~~v~~v~~D~~d~~~l~~~~~-------~~d~vi~~a~~~~-------------------~~~~~~l~~a----a~~~g~  105 (308)
T 1qyc_A           56 SGANIVHGSIDDHASLVEAVK-------NVDVVISTVGSLQ-------------------IESQVNIIKA----IKEVGT  105 (308)
T ss_dssp             TTCEEECCCTTCHHHHHHHHH-------TCSEEEECCCGGG-------------------SGGGHHHHHH----HHHHCC
T ss_pred             CCCEEEEeccCCHHHHHHHHc-------CCCEEEECCcchh-------------------hhhHHHHHHH----HHhcCC
Confidence            458889999999999887775       5899999998532                   1223333333    343320


Q ss_pred             CCCCCCCCceEEEEccccccc-----ccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCC--
Q 025124          100 GQASSSSGGIIINISATLHYT-----ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--  172 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~-----~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~--  172 (257)
                             -++|| .|+.+...     ..+....| .+|.+++.+.+.        .|++++.++||++.+........  
T Consensus       106 -------v~~~v-~S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~--------~~~~~~~~r~~~~~~~~~~~~~~~~  168 (308)
T 1qyc_A          106 -------VKRFF-PSEFGNDVDNVHAVEPAKSVF-EVKAKVRRAIEA--------EGIPYTYVSSNCFAGYFLRSLAQAG  168 (308)
T ss_dssp             -------CSEEE-CSCCSSCTTSCCCCTTHHHHH-HHHHHHHHHHHH--------HTCCBEEEECCEEHHHHTTTTTCTT
T ss_pred             -------CceEe-ecccccCccccccCCcchhHH-HHHHHHHHHHHh--------cCCCeEEEEeceecccccccccccc
Confidence                   24566 34433211     12334578 999998887753        25777888998876432110000  


Q ss_pred             ----hHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecC-CcccCCCCCCcHHHHHHHHHHHhccC
Q 025124          173 ----PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDG-GNWLSNPRDLPKEAVNQLSRAVERKS  245 (257)
Q Consensus       173 ----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dg-g~~~~~~~~~~~~~~~~~~~~~~~~~  245 (257)
                          ................+.+++|+++.++.++..+.  ..|+.+.+.| |..+.     ..++...+.+..+++.
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~~~g~~~~~s-----~~e~~~~~~~~~g~~~  239 (308)
T 1qyc_A          169 LTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPR--TLNKTLYLRLPANTLS-----LNELVALWEKKIDKTL  239 (308)
T ss_dssp             CSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGG--GTTEEEECCCGGGEEE-----HHHHHHHHHHHTTSCC
T ss_pred             ccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCcc--ccCeEEEEeCCCCccC-----HHHHHHHHHHHhCCCC
Confidence                00000000011112235688999999999997542  2366666654 33333     3555666666655543

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=98.34  E-value=5.8e-05  Score=62.35  Aligned_cols=207  Identities=12%  Similarity=0.007  Sum_probs=119.7

Q ss_pred             HHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHH-HHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHH
Q 025124            9 RSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST-INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC   87 (257)
Q Consensus         9 ~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~-~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~   87 (257)
                      ..+++.|.+.|.++..+.=+-.. ..+  ..+.+ .+.+..+|.+||.||..........+.+..+..++.|+.++..+.
T Consensus        14 ~~L~~~L~~~G~~V~~l~R~~~~-~~~--~~~~~~~~~l~~~d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~   90 (298)
T 4b4o_A           14 TALTQLLNARGHEVTLVSRKPGP-GRI--TWDELAASGLPSCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLA   90 (298)
T ss_dssp             HHHHHHHHHTTCEEEEEESSCCT-TEE--EHHHHHHHCCCSCSEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCEEEEEECCCCc-Cee--ecchhhHhhccCCCEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHH
Confidence            45677888888777765322111 000  01111 233568999999998544444444567777788889998887777


Q ss_pred             HHHHHHHHhcCCCCCCCCCCceEEEEccccccccc-----------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEE
Q 025124           88 HEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (257)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~-----------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~  156 (257)
                      +.+...-  ..        ..++|+.||...+...           .....|+..+...+..     .... ..++++..
T Consensus        91 ~~~~~~~--~~--------~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~~~~e~~-----~~~~-~~~~~~~~  154 (298)
T 4b4o_A           91 KAITKAP--QP--------PKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKWEAA-----ARLP-GDSTRQVV  154 (298)
T ss_dssp             HHHHHCS--SC--------CSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHHHHHHHH-----HCCS-SSSSEEEE
T ss_pred             HHHHHhC--CC--------ceEEEEEeeeeeecCCCCCcccccCCccccchhHHHHHHHHHH-----HHhh-ccCCceee
Confidence            6653321  11        3457777776544221           1223344444433321     2234 67899999


Q ss_pred             EecCcccCCCCCCCCChHHHHHHhhhh--------ccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCC
Q 025124          157 IAPGPIKDTAGVSKLAPEEIRSKATDY--------MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRD  228 (257)
Q Consensus       157 v~Pg~v~t~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~  228 (257)
                      ++|+.+..+..  .. -..+.......        .....+++.+|+++++.+++..+.  ..| .+++.++..+.    
T Consensus       155 ~r~~~v~g~~~--~~-~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~--~~g-~yn~~~~~~~t----  224 (298)
T 4b4o_A          155 VRSGVVLGRGG--GA-MGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANH--VHG-VLNGVAPSSAT----  224 (298)
T ss_dssp             EEECEEECTTS--HH-HHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHHHCTT--CCE-EEEESCSCCCB----
T ss_pred             eeeeeEEcCCC--Cc-hhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHHHhCCC--CCC-eEEEECCCccC----
Confidence            99999987632  00 01111111111        111234678999999999996543  334 78887765554    


Q ss_pred             CcHHHHHHHHHHHhccC
Q 025124          229 LPKEAVNQLSRAVERKS  245 (257)
Q Consensus       229 ~~~~~~~~~~~~~~~~~  245 (257)
                       ..++.+.|.+..+++.
T Consensus       225 -~~e~~~~ia~~lgrp~  240 (298)
T 4b4o_A          225 -NAEFAQTFGAALGRRA  240 (298)
T ss_dssp             -HHHHHHHHHHHHTCCC
T ss_pred             -HHHHHHHHHHHhCcCC
Confidence             5777888888887643

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=97.79  E-value=2.6e-05  Score=58.52  Aligned_cols=47  Identities=23%  Similarity=0.270  Sum_probs=42.2

Q ss_pred             HHHHHHhcCCCeEEEEccCCCH--HHHHHHHHHHHHHhCCccEEEeCCCC
Q 025124           11 AVAALHSLGIPAIGLEGDVRKR--EDAVRVVESTINHFGKLDILVNAAAG   58 (257)
Q Consensus        11 ~~~~l~~~~~~~~~~~~Dls~~--~~~~~~~~~~~~~~g~id~li~~ag~   58 (257)
                      +.+.+.+.|.++..+++|++++  ++++++++.+.+.+|+ |++|||+|+
T Consensus        59 ~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVnnAgg  107 (157)
T 3gxh_A           59 EGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVHCLAN  107 (157)
T ss_dssp             HHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEECSBS
T ss_pred             HHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEECCCC
Confidence            4556677788899999999999  9999999999999999 999999996

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=96.40  E-value=0.00012  Score=60.32  Aligned_cols=75  Identities=12%  Similarity=0.189  Sum_probs=49.8

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCH-HHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSP-NGFRTVIEID   79 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~-~~~~~~~~~n   79 (257)
                      +|+.++++++.+++... .++.++.+|+++.++++++++       .+|++|||+|... ..++.+.+. ++++..+++|
T Consensus       150 ~R~~~~~~~l~~~~~~~-~~~~~~~~D~~~~~~~~~~~~-------~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn  221 (287)
T 1lu9_A          150 GRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAVK-------GAHFVFTAGAIGLELLPQAAWQNESSIEIVADYN  221 (287)
T ss_dssp             ESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHTT-------TCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECC
T ss_pred             ECCHHHHHHHHHHHHhc-CCcEEEEecCCCHHHHHHHHH-------hCCEEEECCCccccCCChhHcCchHHHHHHHHhh
Confidence            68888999888888653 246678899999988776654       4799999998542 222212222 3344456666


Q ss_pred             hHHHH
Q 025124           80 SVGTF   84 (257)
Q Consensus        80 ~~~~~   84 (257)
                      +.+++
T Consensus       222 ~~~~~  226 (287)
T 1lu9_A          222 AQPPL  226 (287)
T ss_dssp             CSSSC
T ss_pred             hhhhH
Confidence            66544

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=96.39  E-value=0.0071  Score=50.63  Aligned_cols=87  Identities=8%  Similarity=0.002  Sum_probs=60.8

Q ss_pred             HhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccc-----
Q 025124           45 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-----  119 (257)
Q Consensus        45 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~-----  119 (257)
                      .+.+.|++||.||.....   ..+   ....+++|+.++..+.+++..+-  ..        ..+++++|++...     
T Consensus        77 a~~~~D~Vih~Ag~~~~~---~~~---~~~~~~~Nv~~t~~l~~a~~~~~--~~--------~~~vvv~snp~~~~~~~~  140 (327)
T 1y7t_A           77 AFKDADYALLVGAAPRKA---GME---RRDLLQVNGKIFTEQGRALAEVA--KK--------DVKVLVVGNPANTNALIA  140 (327)
T ss_dssp             HTTTCSEEEECCCCCCCT---TCC---HHHHHHHHHHHHHHHHHHHHHHS--CT--------TCEEEECSSSHHHHHHHH
T ss_pred             HhCCCCEEEECCCcCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhhc--CC--------CeEEEEeCCchhhhHHHH
Confidence            345789999999975432   123   34578999999999988876541  01        3578888886521     


Q ss_pred             ---c-ccccchhhHHHHHHHHHHHHHHHHHhc
Q 025124          120 ---T-ATWYQIHVSAAKAAVDSITRSLALEWG  147 (257)
Q Consensus       120 ---~-~~~~~~~Y~~sK~a~~~l~~~la~e~~  147 (257)
                         . +.+....|+.+|...+.+.+.++..++
T Consensus       141 ~~~~~~~~p~~~yg~tkl~~er~~~~~a~~~g  172 (327)
T 1y7t_A          141 YKNAPGLNPRNFTAMTRLDHNRAKAQLAKKTG  172 (327)
T ss_dssp             HHTCTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             HHHcCCCChhheeccchHHHHHHHHHHHHHhC
Confidence               1 233445699999999999988887764

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=95.55  E-value=0.031  Score=48.19  Aligned_cols=53  Identities=15%  Similarity=0.065  Sum_probs=45.1

Q ss_pred             CCCcHHHHHHHHHHHHhc-CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCC
Q 025124            1 MGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG   58 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~   58 (257)
                      ++|+.++++++++++... +.++..+.+|++|.+++++++++.     ++|+|||++|.
T Consensus        33 ~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-----~~DvVin~ag~   86 (405)
T 4ina_A           33 ASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV-----KPQIVLNIALP   86 (405)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----CCSEEEECSCG
T ss_pred             EECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----CCCEEEECCCc
Confidence            368999999999988765 346889999999999999998875     69999999984

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=93.36  E-value=0.047  Score=43.05  Aligned_cols=57  Identities=16%  Similarity=0.035  Sum_probs=38.7

Q ss_pred             HHHHHHHHHhcCCCeEEEEc----------cCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCC
Q 025124            8 LRSAVAALHSLGIPAIGLEG----------DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA   64 (257)
Q Consensus         8 l~~~~~~l~~~~~~~~~~~~----------Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~   64 (257)
                      ...+++.+.+.|.++.++..          |+.+..+.+++++.+.+.++++|++|||||+....++
T Consensus        37 G~aiA~~~~~~Ga~V~l~~~~~~l~~~~g~~~~dv~~~~~~~~~v~~~~~~~Dili~~Aav~d~~p~  103 (226)
T 1u7z_A           37 GFAIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMTALEMEAAVNASVQQQNIFIGCAAVADYRAA  103 (226)
T ss_dssp             HHHHHHHHHHTTCEEEEEECSCCCCCCTTEEEEECCSHHHHHHHHHHHGGGCSEEEECCBCCSEEES
T ss_pred             HHHHHHHHHHCCCEEEEEECCcccccCCCCeEEccCcHHHHHHHHHHhcCCCCEEEECCcccCCCCc
Confidence            44567777777877765421          1223334566778888889999999999997654433

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=91.54  E-value=0.064  Score=42.46  Aligned_cols=66  Identities=11%  Similarity=0.089  Sum_probs=45.5

Q ss_pred             HHHHHHHHHhcCCCeEEEEc------------cCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHH
Q 025124            8 LRSAVAALHSLGIPAIGLEG------------DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFR   73 (257)
Q Consensus         8 l~~~~~~l~~~~~~~~~~~~------------Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~   73 (257)
                      ...+++.+...|.++.++..            |+.+.++++++++.+.+.++++|++|+||++....+....+.+++.
T Consensus        32 G~aiA~~~~~~Ga~V~lv~~~~~~~~~~~~~~~~~~v~s~~em~~~v~~~~~~~Dili~aAAvsD~~p~~~~~~e~~~  109 (232)
T 2gk4_A           32 GKIITETLLSAGYEVCLITTKRALKPEPHPNLSIREITNTKDLLIEMQERVQDYQVLIHSMAVSDYTPVYMTGLEEVQ  109 (232)
T ss_dssp             HHHHHHHHHHTTCEEEEEECTTSCCCCCCTTEEEEECCSHHHHHHHHHHHGGGCSEEEECSBCCSEEEEEEEEHHHHH
T ss_pred             HHHHHHHHHHCCCEEEEEeCCccccccCCCCeEEEEHhHHHHHHHHHHHhcCCCCEEEEcCccccccchhhcchhhhh
Confidence            34567777777877766643            3334456888899999999999999999998765544433444433

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=90.36  E-value=0.44  Score=32.47  Aligned_cols=43  Identities=12%  Similarity=0.152  Sum_probs=31.8

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCC
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA   57 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag   57 (257)
                      +|++++++.+.      ...+.++.+|+++.+++.++++       ++|++|++++
T Consensus        36 ~r~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi~~~~   78 (118)
T 3ic5_A           36 DHDLAALAVLN------RMGVATKQVDAKDEAGLAKALG-------GFDAVISAAP   78 (118)
T ss_dssp             ESCHHHHHHHH------TTTCEEEECCTTCHHHHHHHTT-------TCSEEEECSC
T ss_pred             eCCHHHHHHHH------hCCCcEEEecCCCHHHHHHHHc-------CCCEEEECCC
Confidence            56776666543      2356778999999887776653       7899999996

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=89.78  E-value=6  Score=35.08  Aligned_cols=129  Identities=15%  Similarity=0.049  Sum_probs=76.2

Q ss_pred             HHHHHHHHhcCCCeEEEEccCC-CHHHHHHHHHHHH-HHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHH-HHhHHHHH
Q 025124            9 RSAVAALHSLGIPAIGLEGDVR-KREDAVRVVESTI-NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIE-IDSVGTFI   85 (257)
Q Consensus         9 ~~~~~~l~~~~~~~~~~~~Dls-~~~~~~~~~~~~~-~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~-~n~~~~~~   85 (257)
                      +.+.+.|.+.|.++..+..+-. +.+.+...+.+.. ...+.++.|+|-.+...... ....      .+. ..+.+.+.
T Consensus        65 ~~l~~~L~~~G~~v~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~~-~~~~------~~~~~g~~~~l~  137 (525)
T 3qp9_A           65 APVLAALSGAGADPVQLDVSPLGDRQRLAATLGEALAAAGGAVDGVLSLLAWDESAH-PGHP------APFTRGTGATLT  137 (525)
T ss_dssp             HHHHHHHHHTTCEEEEEEECTTCCHHHHHHHHHHHHHHTTSCCSEEEECGGGCCCBC-TTSC------TTCBHHHHHHHH
T ss_pred             HHHHHHHHhcCCeEEEEeCCCCCCHHHHHHHHHhhhhcccCCCCeEEEcccCCCCcc-cccc------ccccchHHHHHH
Confidence            4577888888888877765543 6777776666333 55678999999877533211 0000      111 34566777


Q ss_pred             HHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEE
Q 025124           86 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (257)
Q Consensus        86 l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v  157 (257)
                      ++|++...   ..        ..++..++..+...+ .....-...++++.+|.|+++.|+. ...++...+
T Consensus       138 l~qal~~~---~~--------~~~l~~vT~ga~~~~-~~~~~~~p~~a~l~Gl~r~~~~E~p-~~~~~~vDl  196 (525)
T 3qp9_A          138 LVQALEDA---GV--------AAPLWCVTHGAVSVG-RADHVTSPAQAMVWGMGRVAALEHP-ERWGGLIDL  196 (525)
T ss_dssp             HHHHHHHT---TC--------CSCEEEEEESCCCCB-TTBCCSCHHHHHHHHHHHHHHHHST-TTEEEEEEE
T ss_pred             HHHHHHhc---CC--------CCcEEEEECCCEeCC-CCCCCCCHHHHHHHHHHHHHHHhCC-CceEEEEEc
Confidence            77776432   11        345666665432221 1111225678899999999999986 433444444

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=81.87  E-value=0.88  Score=39.66  Aligned_cols=47  Identities=15%  Similarity=0.090  Sum_probs=32.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN   59 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~   59 (257)
                      +|+.++++++.+.+    ..+..+.+|++|.+++.++++       ++|+|||+++..
T Consensus        33 ~R~~~~a~~la~~~----~~~~~~~~Dv~d~~~l~~~l~-------~~DvVIn~a~~~   79 (450)
T 1ff9_A           33 CRTLESAKKLSAGV----QHSTPISLDVNDDAALDAEVA-------KHDLVISLIPYT   79 (450)
T ss_dssp             ESSHHHHHHTTTTC----TTEEEEECCTTCHHHHHHHHT-------TSSEEEECCC--
T ss_pred             ECCHHHHHHHHHhc----CCceEEEeecCCHHHHHHHHc-------CCcEEEECCccc
Confidence            56766665543322    246788999999988776653       699999999853

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=81.24  E-value=4.3  Score=33.57  Aligned_cols=92  Identities=8%  Similarity=-0.004  Sum_probs=55.6

Q ss_pred             hCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccc------
Q 025124           46 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY------  119 (257)
Q Consensus        46 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~------  119 (257)
                      +...|++|+.||.....   ..+.   ...+..|+.....+++.+..+-  ..        .++|+++|++...      
T Consensus        81 l~~aD~Vi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~~~--~p--------~a~ii~~SNPv~~~t~~~~  144 (329)
T 1b8p_A           81 FKDADVALLVGARPRGP---GMER---KDLLEANAQIFTVQGKAIDAVA--SR--------NIKVLVVGNPANTNAYIAM  144 (329)
T ss_dssp             TTTCSEEEECCCCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHHHS--CT--------TCEEEECSSSHHHHHHHHH
T ss_pred             hCCCCEEEEeCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHhc--CC--------CeEEEEccCchHHHHHHHH
Confidence            45789999999965431   2233   2467778887777776665431  02        5789999986521      


Q ss_pred             --c-ccccchhhHHHHHHHHHHHHHHHHHhc-CCCCeE
Q 025124          120 --T-ATWYQIHVSAAKAAVDSITRSLALEWG-TDYAIR  153 (257)
Q Consensus       120 --~-~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~~gi~  153 (257)
                        . +.+..-.|+.+..--..+...++..+. .+..|+
T Consensus       145 ~~~~~~p~~~v~g~t~Ld~~r~~~~la~~lgv~~~~v~  182 (329)
T 1b8p_A          145 KSAPSLPAKNFTAMLRLDHNRALSQIAAKTGKPVSSIE  182 (329)
T ss_dssp             HTCTTSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEE
T ss_pred             HHcCCCCHHHEEEeecHHHHHHHHHHHHHhCcCHHHce
Confidence              1 223333467766555666667777665 234454

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	257
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	6e-47
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	8e-44
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	9e-44
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	2e-41
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	4e-40
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	2e-39
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	2e-39
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	2e-39
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	1e-38
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	2e-38
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	2e-38
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	8e-38
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	4e-37
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	4e-37
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	9e-37
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	2e-36
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	3e-36
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	4e-36
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	6e-36
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	2e-35
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	2e-35
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	3e-35
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	4e-35
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	1e-34
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	1e-34
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	4e-34
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	5e-34
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	8e-34
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	2e-32
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	3e-32
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	1e-30
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	2e-30
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	3e-30
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	8e-30
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-29
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	1e-29
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-29
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	5e-29
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	8e-29
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	9e-29
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	1e-28
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	2e-28
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-28
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	3e-27
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	4e-27
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	8e-27
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	9e-27
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-26
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	1e-25
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	4e-24
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	2e-23
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	3e-22
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	4e-21
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	9e-21
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	9e-19
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	4e-18
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	8e-18
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	1e-17
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	9e-16
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	5e-15
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	2e-12
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	4e-11
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	1e-10
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	1e-09
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	3e-08
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	0.001

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  154 bits (391), Expect = 6e-47
 Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 11/211 (5%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
           A AA+ +LG   + ++ DV +  D     +  I+ FG+ DILVN A    L+P ++L+  
Sbjct: 43  AEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFE 102

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            ++   EI+    F+M    +  +K+ G         G IIN+++T ++       H  +
Sbjct: 103 QWKKTFEINVDSGFLMAKAFVPGMKRNG--------WGRIINLTSTTYWLKIEAYTHYIS 154

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-F 189
            KAA    TR+LA + G    I VN IAP  +  TA     A   +     + + A    
Sbjct: 155 TKAANIGFTRALASDLG-KDGITVNAIAPSLV-RTATTEASALSAMFDVLPNMLQAIPRL 212

Query: 190 GEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
               D+  AA +LASD   ++ G TL VDGG
Sbjct: 213 QVPLDLTGAAAFLASDDASFITGQTLAVDGG 243

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  146 bits (370), Expect = 8e-44
 Identities = 59/206 (28%), Positives = 93/206 (45%), Gaps = 13/206 (6%)

Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 78
            I     + D+    + VR VE      G++D+LVN AA      A  +    +R V+E+
Sbjct: 47  AIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEV 106

Query: 79  DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSI 138
           +      +   A + ++K G G         I+N+++     A       +A+K  + ++
Sbjct: 107 NLTAPMHLSALAAREMRKVGGGA--------IVNVASVQGLFAEQENAAYNASKGGLVNL 158

Query: 139 TRSLALEWGTDYAIRVNGIAPGPIK----DTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 194
           TRSLAL+      IRVN +APG I       A      PE  R    D  A  + G+  +
Sbjct: 159 TRSLALDLA-PLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEE 217

Query: 195 IAMAALYLASDAGKYVNGNTLIVDGG 220
           +A A L+LAS+   ++ G  L VDGG
Sbjct: 218 VAEAVLFLASEKASFITGAILPVDGG 243

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  146 bits (370), Expect = 9e-44
 Identities = 56/231 (24%), Positives = 92/231 (39%), Gaps = 11/231 (4%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNF 60
            R +  L   ++     G    G   D   R +  +++++  + F GKLDIL+N      
Sbjct: 39  ARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIR 98

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
             P  D +   F   I  +    + +   A   LK  G G         II +S+     
Sbjct: 99  SKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCG--------NIIFMSSIAGVV 150

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
           +       SA K A++ + R+LA EW     IR N +AP  I  T     +  +E +   
Sbjct: 151 SASVGSIYSATKGALNQLARNLACEWA-SDGIRANAVAPAVI-ATPLAEAVYDDEFKKVV 208

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPK 231
                  +FGE  +++    +L   A  Y+ G T+ VDGG  ++     P+
Sbjct: 209 ISRKPLGRFGEPEEVSSLVAFLCMPAASYITGQTICVDGGLTVNGFSYQPQ 259

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  140 bits (353), Expect = 2e-41
 Identities = 56/224 (25%), Positives = 92/224 (41%), Gaps = 18/224 (8%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
              +   +   A L   G  ++ +  DV    D   V+ +     G L++LVN A     
Sbjct: 37  DINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLP 93

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
              E      F  +++I++   FI C + +  +K+         +GG IIN+++   +  
Sbjct: 94  GDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKE---------TGGSIINMASVSSWLP 144

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
                  SA+KAAV ++TR+ AL      YAIRVN I P  I  T  +    P+ +  + 
Sbjct: 145 IEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGI-YTPMMQASLPKGVSKEM 203

Query: 181 TDYMAAYK----FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             +               IA   L+LASD    ++G+ L  D  
Sbjct: 204 VLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMSGSELHADNS 247

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  137 bits (345), Expect = 4e-40
 Identities = 57/220 (25%), Positives = 93/220 (42%), Gaps = 10/220 (4%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
           GR   V   A  ++ +        + D    +   ++ ++T   FG +  LVN A     
Sbjct: 37  GRHSDVGEKAAKSVGTPD-QIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVN 95

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
              E+ +   +R ++ ++  G F      ++ +K  G        G  IIN+S+   +  
Sbjct: 96  KSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGL-------GASIINMSSIEGFVG 148

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGT-DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
                  +A+K AV  +++S AL+    DY +RVN + PG I  T  V  L   E     
Sbjct: 149 DPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYI-KTPLVDDLPGAEEAMSQ 207

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                    GE  DIA   +YLAS+  K+  G+  +VDGG
Sbjct: 208 RTKTPMGHIGEPNDIAYICVYLASNESKFATGSEFVVDGG 247

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  135 bits (342), Expect = 2e-39
 Identities = 62/234 (26%), Positives = 94/234 (40%), Gaps = 24/234 (10%)

Query: 2   GRRKTVLRSAVAALHSLGIP---AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA- 57
           GR    L      + + G+       +  DV        ++ +T+  FGKLDILVN A  
Sbjct: 36  GRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGA 95

Query: 58  ---GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 114
               +        S   +   + ++      +  +A+ +L            G I+   S
Sbjct: 96  AIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK--------GEIVNISS 147

Query: 115 ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE 174
                 AT    + S AKAA+D  TR+ A++    + IRVN I+PG +    G +   PE
Sbjct: 148 IASGLHATPDFPYYSIAKAAIDQYTRNTAIDLI-QHGIRVNSISPGLVATGFGSAMGMPE 206

Query: 175 EIRSKATDYMAAYK-------FGEKWDIAMAALYLAS-DAGKYVNGNTLIVDGG 220
           E   K    MA  K        G+  DIA    +LA      Y+ G+ L+VDGG
Sbjct: 207 ETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGG 260

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  135 bits (341), Expect = 2e-39
 Identities = 50/224 (22%), Positives = 85/224 (37%), Gaps = 13/224 (5%)

Query: 2   GRRKTVLRSAVAALHSLGIP--AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN 59
            R    +    A   S G P   I    D+   ED + +  +  +    +DI +N A   
Sbjct: 41  ARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLA 100

Query: 60  FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 119
                   S +G++ +  ++ +   I   EA + +K+           G IINI++   +
Sbjct: 101 RPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVD------DGHIININSMSGH 154

Query: 120 TATWYQIHV--SAAKAAVDSITRSLALEWGT-DYAIRVNGIAPGPIKDTAGVSKLAPEEI 176
                 +    SA K AV ++T  L  E       IR   I+PG + +T    KL  ++ 
Sbjct: 155 RVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVV-ETQFAFKL-HDKD 212

Query: 177 RSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             KA       K  +  D+A A +Y+ S       G+  +   G
Sbjct: 213 PEKAAATYEQMKCLKPEDVAEAVIYVLSTPAHIQIGDIQMRPTG 256

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  135 bits (341), Expect = 2e-39
 Identities = 68/216 (31%), Positives = 90/216 (41%), Gaps = 11/216 (5%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
             A    LG  A     DV   ED  RVV      FG +D LVN A  +  +  E  S  
Sbjct: 42  GAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVE 101

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            FR V+EI+  G FI     +  +K  G        GG I+NIS+              A
Sbjct: 102 RFRKVVEINLTGVFIGMKTVIPAMKDAG--------GGSIVNISSAAGLMGLALTSSYGA 153

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 190
           +K  V  +++  A+E GTD  IRVN + PG    T   ++    +      +        
Sbjct: 154 SKWGVRGLSKLAAVELGTDR-IRVNSVHPGMT-YTPMTAETGIRQGEGNYPNTPMGRVGN 211

Query: 191 EKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNP 226
           E  +IA A + L SD   YV G  L VDGG W + P
Sbjct: 212 EPGEIAGAVVKLLSDTSSYVTGAELAVDGG-WTTGP 246

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  133 bits (336), Expect = 1e-38
 Identities = 62/230 (26%), Positives = 99/230 (43%), Gaps = 16/230 (6%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNF 60
            R +  L   +    S G        D+  R +   ++ +  NHF GKL+ILVN A    
Sbjct: 39  SRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVI 98

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
              A+D +   +  ++ I+    + +   A  +LK   RG         ++ IS+     
Sbjct: 99  YKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGN--------VVFISSVSGAL 150

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
           A  Y+    A K A+D +TR LA EW     IRVNG+ PG I  T+ V     +  + + 
Sbjct: 151 AVPYEAVYGATKGAMDQLTRCLAFEWA-KDNIRVNGVGPGVI-ATSLVEMTIQDPEQKEN 208

Query: 181 TDYMAAY----KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNP 226
            + +       + GE  ++A    +L   A  YV G  + VDGG  ++N 
Sbjct: 209 LNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGG-LMANC 257

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  133 bits (336), Expect = 2e-38
 Identities = 56/237 (23%), Positives = 100/237 (42%), Gaps = 24/237 (10%)

Query: 2   GRRKTVLRSAVAALHSLGIP---AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA- 57
           GR    L      +   G+       +  DV   +   +++ ST+  FGK+D+LVN A  
Sbjct: 36  GRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGA 95

Query: 58  ---GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 114
                F     D   + +   ++++      M  +   +L            G I+   S
Sbjct: 96  AIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK--------GEIVNVSS 147

Query: 115 ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE 174
                 A    ++ + AKAA+D  TRS A++    + IRVN ++PG ++     +   P+
Sbjct: 148 IVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLA-KFGIRVNSVSPGMVETGFTNAMGMPD 206

Query: 175 EIRSKATDYMAAYK-------FGEKWDIAMAALYLAS-DAGKYVNGNTLIVDGGNWL 223
           +   K  ++MA++K        G+   IA   L+LA  +   Y+ G +++ DGG  L
Sbjct: 207 QASQKFYNFMASHKECIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL 263

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  132 bits (333), Expect = 2e-38
 Identities = 67/228 (29%), Positives = 110/228 (48%), Gaps = 22/228 (9%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN-F 60
            + ++  R+    L      A+ +  DV + +D   +V  TI  FG+LD +VN A  +  
Sbjct: 37  DKDESGGRALEQELPG----AVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPP 92

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
               E+ S  GFR ++E++ +GT+ +   AL YL+K           G +INIS+ +   
Sbjct: 93  PQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ---------GNVINISSLVGAI 143

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-----PEE 175
                +   A K AV ++T++LAL+    Y +RVN I+PG I  T    +LA     P  
Sbjct: 144 GQAQAVPYVATKGAVTAMTKALALDES-PYGVRVNCISPGNI-WTPLWEELAALMPDPRA 201

Query: 176 IRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 223
              +        + G+  ++  AA++LAS+A  +  G  L+V GG  L
Sbjct: 202 SIREGMLAQPLGRMGQPAEVGAAAVFLASEAN-FCTGIELLVTGGAEL 248

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  131 bits (330), Expect = 8e-38
 Identities = 52/231 (22%), Positives = 97/231 (41%), Gaps = 21/231 (9%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
           G         VA L  LG   + ++ D+ K  + V + +  ++HFG LD +++ +     
Sbjct: 38  GSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVW 97

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
               +++   F  V  +++ G F +  + LK+ ++GGR   +SS   ++         T 
Sbjct: 98  CDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVM---------TG 148

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK-----------DTAGVSK 170
                  + +KAAV+   R+ A++ G    + VN IAPG +K              G   
Sbjct: 149 IPNHALYAGSKAAVEGFCRAFAVDCG-AKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKG 207

Query: 171 LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN 221
           +  E+I     +     + G   DI  A   L  +  +++NG  + + GG 
Sbjct: 208 MPQEKIDEGLANMNPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGGG 258

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  129 bits (325), Expect = 4e-37
 Identities = 44/220 (20%), Positives = 89/220 (40%), Gaps = 4/220 (1%)

Query: 2   GRRKTVLRSAVAAL-HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
            R           +    G+     + DV   +   + ++      G +  L+  A  + 
Sbjct: 40  YRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSV 99

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
           + PA +L+   F  V +++  G F  C    K   +  +  +   +  +   I       
Sbjct: 100 VKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLN 159

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
            +  Q+  +++KAA  ++ + LA EW     IRVN ++PG + +T   + +  ++IR   
Sbjct: 160 GSLTQVFYNSSKAACSNLVKGLAAEWA-SAGIRVNALSPGYV-NTDQTAHM-DKKIRDHQ 216

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
              +   +F +  ++   A+ L SD   Y+ G    +DGG
Sbjct: 217 ASNIPLNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGG 256

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  129 bits (326), Expect = 4e-37
 Identities = 64/233 (27%), Positives = 98/233 (42%), Gaps = 23/233 (9%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
                    VAA+   G  A  ++ +V   ED VR+ E  +  FGKLDI+ + +      
Sbjct: 51  NSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFG 110

Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 122
             +D++P  F  V  I++ G F +  EA K+L+ GGR     S  G            A 
Sbjct: 111 HVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITG---------QAKAV 161

Query: 123 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI------ 176
                 S +K A+++  R +A++   D  I VN +APG I  T     +  E I      
Sbjct: 162 PKHAVYSGSKGAIETFARCMAIDMA-DKKITVNVVAPGGI-KTDMYHAVCREYIPNGENL 219

Query: 177 ------RSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 223
                    A  +    + G   DIA    +LAS+ G +V G  + +DGG  +
Sbjct: 220 SNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGACM 272

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  128 bits (322), Expect = 9e-37
 Identities = 61/219 (27%), Positives = 102/219 (46%), Gaps = 17/219 (7%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
              +  LR A  A     + A  +  DV       R     + H G+LD +V+ A     
Sbjct: 36  DIEEGPLREAAEA-----VGAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRD 90

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
                +    +  V+ ++  G+F++   A + +++              I ++A+  Y  
Sbjct: 91  NFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMRE---------KNPGSIVLTASRVYLG 141

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
              Q + +A+ A V  +TR+LALE G  + IRVN +APG I +T   +K+ PE++R KA 
Sbjct: 142 NLGQANYAASMAGVVGLTRTLALELG-RWGIRVNTLAPGFI-ETRMTAKV-PEKVREKAI 198

Query: 182 DYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                 + G+  ++A AAL+L SD   ++ G  L VDGG
Sbjct: 199 AATPLGRAGKPLEVAYAALFLLSDESSFITGQVLFVDGG 237

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score =  128 bits (323), Expect = 2e-36
 Identities = 71/239 (29%), Positives = 115/239 (48%), Gaps = 16/239 (6%)

Query: 2   GRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
            R+  VL++    + S  G     ++ DVR  +     V   I   G  +I++N AAGNF
Sbjct: 56  SRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNF 115

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
           + P E LSPN ++T+ +I   GT  +  E  K L K  +G          ++I+     T
Sbjct: 116 ISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKG-------AAFLSITTIYAET 168

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSK 179
            + + +  ++AKA V+++++SLA EWG  Y +R N I PGPIK     S+L P      +
Sbjct: 169 GSGFVVPSASAKAGVEAMSKSLAAEWG-KYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKE 227

Query: 180 ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG------NWLSNPRDLPKE 232
               +   + G   ++A  A +L SD   ++NG  +  DGG         ++ R + KE
Sbjct: 228 MIGRIPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTKE 286

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  126 bits (318), Expect = 3e-36
 Identities = 61/219 (27%), Positives = 93/219 (42%), Gaps = 11/219 (5%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R +    S V  + S G  + G  GDV K+E+   V+   +     +DILVN A     
Sbjct: 41  SRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRD 100

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
                +  + +  V+  +    F +     K +             G IINIS+ +  T 
Sbjct: 101 NLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR--------YGRIINISSIVGLTG 152

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
              Q + S++KA V   T+SLA E      I VN IAPG I           E+I+    
Sbjct: 153 NVGQANYSSSKAGVIGFTKSLAKELA-SRNITVNAIAPGFISSDMTDKI--SEQIKKNII 209

Query: 182 DYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
             + A + G   ++A  A +L+SD   Y+NG   ++DGG
Sbjct: 210 SNIPAGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGG 248

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  126 bits (317), Expect = 4e-36
 Identities = 53/221 (23%), Positives = 86/221 (38%), Gaps = 16/221 (7%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R +  L S V            +  D+   E      E  +   G +D+LVN AA   L
Sbjct: 38  SRTQADLDSLVRECPG----IEPVCVDLGDWEA----TERALGSVGPVDLLVNNAAVALL 89

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            P  +++   F    E++      +     + L   G           I+N+S+     A
Sbjct: 90  QPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPG-------AIVNVSSQCSQRA 142

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
                   + K A+D +T+ +ALE G  + IRVN + P  +  + G +  +         
Sbjct: 143 VTNHSVYCSTKGALDMLTKVMALELG-PHKIRVNAVNPTVVMTSMGQATWSDPHKAKTML 201

Query: 182 DYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW 222
           + +   KF E   +  A L+L SD      G+TL V+GG W
Sbjct: 202 NRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGGFW 242

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  126 bits (317), Expect = 6e-36
 Identities = 72/225 (32%), Positives = 104/225 (46%), Gaps = 10/225 (4%)

Query: 2   GRRKTVLRSAVAAL-HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
            R       A   L    G+  +    DV   E+  +++E+    FGKLD +VNAA  N 
Sbjct: 36  SRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINR 95

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
             PAE+   + FR VIE++  GT+ +C EA             S +  II   S T+   
Sbjct: 96  RHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSL-------LRESDNPSIINIGSLTVEEV 148

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180
                   +A+K  V S+T++LA EWG  Y IRVN IAPG  +     +  +  E     
Sbjct: 149 TMPNISAYAASKGGVASLTKALAKEWG-RYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYM 207

Query: 181 TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSN 225
              +   + G   D+   A++LAS+  KYV G  + VDGG W +N
Sbjct: 208 LKRIPLGRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGG-WTAN 251

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  124 bits (313), Expect = 2e-35
 Identities = 55/228 (24%), Positives = 95/228 (41%), Gaps = 16/228 (7%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R +  LR+ +  L   G+ A G   DVR   +   +V + +  +G +D+LVN A     
Sbjct: 33  ARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGG 92

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
               +L+   +  V+E +  G F +  + LK      RG       G I+NI++T     
Sbjct: 93  GATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGT------GRIVNIASTGGKQG 146

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK---------DTAGVSKLA 172
             +    SA+K  V   T++L LE      I VN + PG ++           + + +++
Sbjct: 147 VVHAAPYSASKHGVVGFTKALGLELA-RTGITVNAVCPGFVETPMAASVREHYSDIWEVS 205

Query: 173 PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            EE   + T  +   ++ +  ++A    YL       V    L V GG
Sbjct: 206 TEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG 253

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  124 bits (312), Expect = 2e-35
 Identities = 48/219 (21%), Positives = 86/219 (39%), Gaps = 16/219 (7%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R  + L S              +  D+   +      E  +   G +D+LVN AA   +
Sbjct: 36  TRTNSDLVSLAKECPG----IEPVCVDLGDWDA----TEKALGGIGPVDLLVNNAALVIM 87

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            P  +++   F     ++    F +     + +             G I+N+S+ + +  
Sbjct: 88  QPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMIN-------RGVPGSIVNVSSMVAHVT 140

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
               I  S+ K A+  +T+++A+E G  + IRVN + P  +    G    A  E   K  
Sbjct: 141 FPNLITYSSTKGAMTMLTKAMAMELG-PHKIRVNSVNPTVVLTDMGKKVSADPEFARKLK 199

Query: 182 DYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           +     KF E  D+  + L+L SD     +G  ++VD G
Sbjct: 200 ERHPLRKFAEVEDVVNSILFLLSDRSASTSGGGILVDAG 238

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  125 bits (315), Expect = 3e-35
 Identities = 66/232 (28%), Positives = 103/232 (44%), Gaps = 17/232 (7%)

Query: 2   GRRKTVLRSAVAAL-----HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA 56
            R+   L+SA   L      +     I ++ ++R  E+   +V+ST++ FGK++ LVN  
Sbjct: 43  SRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNG 102

Query: 57  AGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 116
            G FL PAE +S  G+  V+E +  GTF MC        K   G          I     
Sbjct: 103 GGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGS---------IVNIIV 153

Query: 117 LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PE 174
                    +H  AA+A V ++T+SLALEW     IR+N +APG I     V       +
Sbjct: 154 PTKAGFPLAVHSGAARAGVYNLTKSLALEWA-CSGIRINCVAPGVIYSQTAVENYGSWGQ 212

Query: 175 EIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNP 226
                +   + A + G   +++    +L S A  ++ G ++ VDGG  L   
Sbjct: 213 SFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSLYTH 264

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  124 bits (312), Expect = 4e-35
 Identities = 62/220 (28%), Positives = 97/220 (44%), Gaps = 11/220 (5%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
                     V  +  LG  A     D+   ++   + +  I+  GK+DILVN A G   
Sbjct: 42  DINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGP 101

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            P  D+    FR   E++    F +       ++K        + GG+I+ I++      
Sbjct: 102 KP-FDMPMADFRRAYELNVFSFFHLSQLVAPEMEK--------NGGGVILTITSMAAENK 152

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
                  +++KAA   + R++A + G +  IRVNGIAPG I  T  +  +   EI  K  
Sbjct: 153 NINMTSYASSKAAASHLVRNMAFDLG-EKNIRVNGIAPGAI-LTDALKSVITPEIEQKML 210

Query: 182 DYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN 221
            +    + G+  DIA AAL+L S A  +V+G  L V GG 
Sbjct: 211 QHTPIRRLGQPQDIANAALFLCSPAASWVSGQILTVSGGG 250

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score =  122 bits (308), Expect = 1e-34
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 8/218 (3%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
            ++    S +  +  +G  AI ++GDV    D + +V+S I  FGKLD+++N A     V
Sbjct: 40  SKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPV 99

Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 122
            + ++S + +  VI+ +  G F+   EA+KY          +   G +IN+S+       
Sbjct: 100 SSHEMSLSDWNKVIDTNLTGAFLGSREAIKY-------FVENDIKGTVINMSSVHEKIPW 152

Query: 123 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD 182
              +H +A+K  +  +T +LALE+     IRVN I PG I       K A  E R+    
Sbjct: 153 PLFVHYAASKGGMKLMTETLALEYA-PKGIRVNNIGPGAINTPINAEKFADPEQRADVES 211

Query: 183 YMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            +     GE  +IA  A +LAS    YV G TL  DGG
Sbjct: 212 MIPMGYIGEPEEIAAVAAWLASSEASYVTGITLFADGG 249

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score =  122 bits (308), Expect = 1e-34
 Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 14/224 (6%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNF 60
            R +  L   +      G+   G   D+  R +  +++++  + F GKL+ILVN A    
Sbjct: 37  SRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVI 96

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
              A+D +   +  ++  +    + +   A   LK    G         +I +S+   ++
Sbjct: 97  HKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGN--------VIFLSSIAGFS 148

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK----DTAGVSKLAPEEI 176
           A       SA+K A++ +T+SLA EW     IRVN +APG I     +TA       +E 
Sbjct: 149 ALPSVSLYSASKGAINQMTKSLACEWA-KDNIRVNSVAPGVILTPLVETAIKKNPHQKEE 207

Query: 177 RSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                      + G+  +++    +L   A  Y+ G  +  DGG
Sbjct: 208 IDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYITGQIIWADGG 251

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  121 bits (305), Expect = 4e-34
 Identities = 59/230 (25%), Positives = 93/230 (40%), Gaps = 14/230 (6%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
                  +     + S  +    +  DV K ED   +V++TI   GKLDI+         
Sbjct: 37  DIADDHGQKVCNNIGSPDV-ISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLST 95

Query: 62  VP--AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 119
            P    +     F+ V++I+  G F++   A + +    +G        I+   S +   
Sbjct: 96  TPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKG-------SIVFTASISSFT 148

Query: 120 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 179
                    +A K AV  +T SL  E G +Y IRVN ++P  +           +  R +
Sbjct: 149 AGEGVSHVYTATKHAVLGLTTSLCTELG-EYGIRVNCVSPYIVASPLLTDVFGVDSSRVE 207

Query: 180 ATDYMAAY---KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNP 226
              + AA          D+A A  YLA D  KYV+G  L++DGG   +NP
Sbjct: 208 ELAHQAANLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNP 257

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  122 bits (307), Expect = 5e-34
 Identities = 43/219 (19%), Positives = 83/219 (37%), Gaps = 25/219 (11%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
           G+  +     V  +   G  A+     V   E   ++V++ ++ FG++D++VN A     
Sbjct: 47  GKGSSAADKVVEEIRRRGGKAVANYDSV---EAGEKLVKTALDTFGRIDVVVNNAGILRD 103

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
                +S   +  +  +   G+F +   A  ++KK           G II  ++      
Sbjct: 104 RSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN--------YGRIIMTASASGIYG 155

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
            + Q + SAAK  +  +  +L +E      I  N IAP     +     + PE++     
Sbjct: 156 NFGQANYSAAKLGLLGLANTLVIEGR-KNNIHCNTIAPNAG--SRMTETVMPEDLV---- 208

Query: 182 DYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                 +  +   +A   L+L  ++    NG    V  G
Sbjct: 209 ------EALKPEYVAPLVLWLCHESC-EENGGLFEVGAG 240

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  121 bits (304), Expect = 8e-34
 Identities = 54/235 (22%), Positives = 97/235 (41%), Gaps = 22/235 (9%)

Query: 2   GRRKTVLRSAVAALHSLGIPA---IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG 58
           GR +  L      +   G+PA     +  DV +      ++ +T+  FGK+DILVN A  
Sbjct: 35  GRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGA 94

Query: 59  NFL--VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 116
           N        D     ++   +++      M  +  ++L K            I+   S  
Sbjct: 95  NLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKG--------EIVNVSSIV 146

Query: 117 LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI 176
               A     + + AKAA+D  TR  A++    + +RVN ++PG +      +   PE  
Sbjct: 147 AGPQAHSGYPYYACAKAALDQYTRCTAIDLI-QHGVRVNSVSPGAVATGFMGAMGLPETA 205

Query: 177 RSKATDYMAAYK-------FGEKWDIAMAALYLAS-DAGKYVNGNTLIVDGGNWL 223
             K   ++ + K        G+  +IA   ++LA  +   Y+ G +++ DGG+ L
Sbjct: 206 SDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTL 260

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  117 bits (293), Expect = 2e-32
 Identities = 37/210 (17%), Positives = 80/210 (38%), Gaps = 18/210 (8%)

Query: 19  GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV-PAEDLSPNGFRTVIE 77
                  +      ++   ++E+  + +G++D+LV+         P +  +   +R  +E
Sbjct: 42  AFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVE 101

Query: 78  IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDS 137
              +  F + +     +KK   G         II I++   +         ++A+A   +
Sbjct: 102 ALQIRPFALVNAVASQMKKRKSGH--------IIFITSATPFGPWKELSTYTSARAGACT 153

Query: 138 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-------FG 190
           +  +L+ E G +Y I V  I P  +  +       P E      +++A  K        G
Sbjct: 154 LANALSKELG-EYNIPVFAIGPNYL-HSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLG 211

Query: 191 EKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            + ++     +LAS +  Y+ G    + GG
Sbjct: 212 TQKELGELVAFLASGSCDYLTGQVFWLAGG 241

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (292), Expect = 3e-32
 Identities = 54/230 (23%), Positives = 89/230 (38%), Gaps = 28/230 (12%)

Query: 2   GRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN 59
                      AALH        + ++ DV  ++         ++HFG+LDILVN A  N
Sbjct: 34  DWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVN 93

Query: 60  FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 119
                   +   +   ++I+ V      +  L Y+ K   G+     GGIIIN+S+    
Sbjct: 94  --------NEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGE-----GGIIINMSSLAGL 140

Query: 120 TATWYQIHVSAAKAAVDSITR--SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR 177
                Q    A+K  +   TR  +LA     +  +R+N I PG + +TA +  +  EE  
Sbjct: 141 MPVAQQPVYCASKHGIVGFTRSAALAANLM-NSGVRLNAICPGFV-NTAILESIEKEENM 198

Query: 178 SKATDYMAAYK-------FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            +  +Y    K         +   IA   + L  D    +NG  + +   
Sbjct: 199 GQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDD--ALNGAIMKITTS 246

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  112 bits (282), Expect = 1e-30
 Identities = 50/224 (22%), Positives = 72/224 (32%), Gaps = 25/224 (11%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSP- 69
                   G   +G+ GDVR  ED  +     +  FGK+D L+  A       A    P 
Sbjct: 42  LAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPE 101

Query: 70  ----NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 125
                 F  V  I+  G        L  L            G +I  IS    Y      
Sbjct: 102 ESLDAAFDEVFHINVKGYIHAVKACLPALVASR--------GNVIFTISNAGFY-PNGGG 152

Query: 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK--------DTAGVSKLAPEEIR 177
              +AAK A+  + R LA E      +RVNG+  G I            G   ++   + 
Sbjct: 153 PLYTAAKHAIVGLVRELAFELAPY--VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLA 210

Query: 178 SKATDYMAAYKFGEKWDIAMAALYLASDA-GKYVNGNTLIVDGG 220
                 +   +  E  +   A ++ A+        G  L  DGG
Sbjct: 211 DMLKSVLPIGRMPEVEEYTGAYVFFATRGDAAPATGALLNYDGG 254

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  111 bits (278), Expect = 2e-30
 Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 16/210 (7%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
             A    L   A  +  DV +       V++ +  FG L +LVN A    +   ED +  
Sbjct: 43  GKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALT 102

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            ++ +++++  G F+     +K +K+ GRG         IINIS+      T      +A
Sbjct: 103 EWQRILDVNLTGVFLGIRAVVKPMKEAGRGS--------IINISSIEGLAGTVACHGYTA 154

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 190
            K AV  +T+S ALE G    IRVN I PG +  T     +  +  ++      A  +  
Sbjct: 155 TKFAVRGLTKSTALELG-PSGIRVNSIHPGLV-KTPMTDWVPEDIFQT------ALGRAA 206

Query: 191 EKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           E  +++   +YLASD   Y  G   +VDGG
Sbjct: 207 EPVEVSNLVVYLASDESSYSTGAEFVVDGG 236

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score =  111 bits (278), Expect = 3e-30
 Identities = 56/228 (24%), Positives = 92/228 (40%), Gaps = 18/228 (7%)

Query: 2   GRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN 59
                 L ++ AA+         +    DV         V +T   FG++D   N A   
Sbjct: 35  DVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIE 94

Query: 60  FLV-PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 118
               P E  +   F  V+ I+  G F+   + LK +++           G+++N ++   
Sbjct: 95  GKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMRE--------QGSGMVVNTASVGG 146

Query: 119 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK------DTAGVSKLA 172
                 Q   +AAK  V  +TR+ A+E+G  Y IR+N IAPG I           +    
Sbjct: 147 IRGIGNQSGYAAAKHGVVGLTRNSAVEYG-RYGIRINAIAPGAIWTPMVENSMKQLDPEN 205

Query: 173 PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           P +   +      + ++GE  +IA    +L SD   YVN   + +DGG
Sbjct: 206 PRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGG 253

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  110 bits (275), Expect = 8e-30
 Identities = 45/181 (24%), Positives = 72/181 (39%), Gaps = 12/181 (6%)

Query: 44  NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQAS 103
           N   +LD+L N A         D     +   + ++    ++M    L  +         
Sbjct: 70  NEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ------ 123

Query: 104 SSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 163
             SG II   S          +   S  KAAV  +T+S+A ++     IR N + PG + 
Sbjct: 124 -KSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFI-QQGIRCNCVCPGTVD 181

Query: 164 DTAGVSKLAPEEIRSKATDYMAAY----KFGEKWDIAMAALYLASDAGKYVNGNTLIVDG 219
             +   ++       +A +         +F    +IAM  +YLASD   YV GN +I+DG
Sbjct: 182 TPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVTGNPVIIDG 241

Query: 220 G 220
           G
Sbjct: 242 G 242

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score =  109 bits (273), Expect = 1e-29
 Identities = 43/187 (22%), Positives = 83/187 (44%), Gaps = 10/187 (5%)

Query: 34  DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 93
           D  + ++       ++DILV  A G      ++L+   F+  I+   +    +    L  
Sbjct: 52  DLRKDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPA 111

Query: 94  LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIR 153
           +K+ G G+        I+ I++    +        ++A+ A+    ++L+ E    Y I 
Sbjct: 112 MKEKGWGR--------IVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVA-PYGIT 162

Query: 154 VNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGN 213
           VN +APG   +T  V +L  EE + +    +   +  +  +IA    +L S+   Y+ G 
Sbjct: 163 VNCVAPGWT-ETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQ 221

Query: 214 TLIVDGG 220
           T++VDGG
Sbjct: 222 TIVVDGG 228

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score =  109 bits (273), Expect = 1e-29
 Identities = 58/219 (26%), Positives = 95/219 (43%), Gaps = 17/219 (7%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R + +L  AVAAL      AI +  DV   +    V    +  FG+L  + + A     
Sbjct: 36  DREERLLAEAVAAL---EAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHS 92

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
             + +L    +  V+ ++  G+F++  +A + L++GG    + S  G+            
Sbjct: 93  ALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGA---------- 142

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
            +   H +A K  V  + R+LALE      +RVN + PG I  T   + L P     +  
Sbjct: 143 -FGLAHYAAGKLGVVGLARTLALELA-RKGVRVNVLLPGLI-QTPMTAGLPPWA-WEQEV 198

Query: 182 DYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                 + G   ++A AAL+L S+   Y+ G  L VDGG
Sbjct: 199 GASPLGRAGRPEEVAQAALFLLSEESAYITGQALYVDGG 237

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  108 bits (271), Expect = 2e-29
 Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 12/220 (5%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R           + + G  AI   GDV K  D   ++++ I+ +G +D++VN A     
Sbjct: 33  ARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRD 92

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
                +  + +  VI+++  G F+    A K + K           G IINI++ +    
Sbjct: 93  TLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR--------KGRIINIASVVGLIG 144

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
              Q + +AAKA V   +++ A E      I VN + PG I  +   +KL  E++  K  
Sbjct: 145 NIGQANYAAAKAGVIGFSKTAAREGA-SRNINVNVVCPGFI-ASDMTAKL-GEDMEKKIL 201

Query: 182 DYMAAYKFGEKWDIAMAALYLA-SDAGKYVNGNTLIVDGG 220
             +   + G+  ++A    +LA S A  Y+ G    +DGG
Sbjct: 202 GTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTIDGG 241

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score =  107 bits (269), Expect = 5e-29
 Identities = 37/221 (16%), Positives = 67/221 (30%), Gaps = 22/221 (9%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R    L        + G     +  D+    D  R+    +  +G +D LVN A     
Sbjct: 39  SRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRF 98

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
               DL+   F   +  +  GTF +       +++           G I  I++     A
Sbjct: 99  GALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH--------SGHIFFITSVAATKA 150

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
             +      +K     +  ++ L       +R+  + PG +  T          +  K  
Sbjct: 151 FRHSSIYCMSKFGQRGLVETMRLYAR-KCNVRITDVQPGAV-YT---------PMWGKVD 199

Query: 182 DYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLI--VDGG 220
           D M A       DIA   +       + V    ++    G 
Sbjct: 200 DEMQA-LMMMPEDIAAPVVQAYLQPSRTVVEEIILRPTSGD 239

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  107 bits (267), Expect = 8e-29
 Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 11/202 (5%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81
             G+E DV   +   R   +   H G +++LV+ A  +       ++   F  VI  +  
Sbjct: 47  LFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLT 106

Query: 82  GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 141
           G F +   A + +++   G+        +I I +         Q + +A+KA V  + RS
Sbjct: 107 GAFRVAQRASRSMQRNKFGR--------MIFIGSVSGLWGIGNQANYAASKAGVIGMARS 158

Query: 142 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 201
           +A E  +   +  N +APG I DT     L  E I+  A  ++ A + G   ++A    +
Sbjct: 159 IAREL-SKANVTANVVAPGYI-DTDMTRAL-DERIQQGALQFIPAKRVGTPAEVAGVVSF 215

Query: 202 LASDAGKYVNGNTLIVDGGNWL 223
           LAS+   Y++G  + VDGG  +
Sbjct: 216 LASEDASYISGAVIPVDGGMGM 237

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score =  107 bits (268), Expect = 9e-29
 Identities = 62/232 (26%), Positives = 94/232 (40%), Gaps = 20/232 (8%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
                  R+  A +   G  A  +  DV  +    R V   ++ +G +DILVN AA   L
Sbjct: 36  DINLEAARATAAEI---GPAACAIALDVTDQASIDRCVAELLDRWGSIDILVNNAALFDL 92

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            P  +++   +  +  I+  GT  M     + +  GGRG         IIN+++      
Sbjct: 93  APIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGG-------KIINMASQAGRRG 145

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP---------IKDTAGVSKLA 172
                   A KAAV S+T+S  L     + I VN IAPG              A    L 
Sbjct: 146 EALVGVYCATKAAVISLTQSAGLNLI-RHGINVNAIAPGVVDGEHWDGVDAKFADYENLP 204

Query: 173 PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 224
             E + +    +   + G   D+   A++LA+    Y+   T  VDGGNW+S
Sbjct: 205 RGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATPEADYIVAQTYNVDGGNWMS 256

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score =  107 bits (268), Expect = 1e-28
 Identities = 50/234 (21%), Positives = 90/234 (38%), Gaps = 24/234 (10%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN-F 60
              +  L  A A++   G+ A     DV   E  +  V+S +  FGK+D L N A     
Sbjct: 36  DMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGA 95

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
             P +D   + F  V+ I+  G F +     + +     G+        I+N ++     
Sbjct: 96  FAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGR--------IVNTASMAGVK 147

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI--------------KDTA 166
                     +K A+ ++T + AL+    Y IRVN I+PG +              K  +
Sbjct: 148 GPPNMAAYGTSKGAIIALTETAALDLA-PYNIRVNAISPGYMGPGFMWERQVELQAKVGS 206

Query: 167 GVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                 P+ +  +    +   ++G+  +I     +L  D   ++ G  L + GG
Sbjct: 207 QYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG 260

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score =  106 bits (265), Expect = 2e-28
 Identities = 51/228 (22%), Positives = 88/228 (38%), Gaps = 17/228 (7%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
                  ++  + ++  G  A+ ++ DV  R+     VE      G  D++VN A     
Sbjct: 32  DYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPS 91

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
            P E ++P     V  I+  G       A++  KK G G         IIN  +   +  
Sbjct: 92  TPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGG-------KIINACSQAGHVG 144

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI---------KDTAGVSKLA 172
                  S++K AV  +T++ A +      I VNG  PG +         +  +  +   
Sbjct: 145 NPELAVYSSSKFAVRGLTQTAARDLA-PLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKP 203

Query: 173 PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                ++    +   +  E  D+A    YLAS    Y+ G +L++DGG
Sbjct: 204 LGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGG 251

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score =  105 bits (263), Expect = 3e-28
 Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 11/213 (5%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70
           A A    LG    GL  +V        V+E     FG++DILVN A          +   
Sbjct: 41  AQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDE 100

Query: 71  GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 130
            +  +IE +    F +    ++ + K           G II I + +       Q + +A
Sbjct: 101 EWNDIIETNLSSVFRLSKAVMRAMMKKR--------HGRIITIGSVVGTMGNGGQANYAA 152

Query: 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 190
           AKA +   ++SLA E      I VN +APG I+     +    ++ R+     + A + G
Sbjct: 153 AKAGLIGFSKSLAREVA-SRGITVNVVAPGFIETDMTRAL--SDDQRAGILAQVPAGRLG 209

Query: 191 EKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 223
              +IA A  +LASD   Y+ G TL V+GG ++
Sbjct: 210 GAQEIANAVAFLASDEAAYITGETLHVNGGMYM 242

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (258), Expect = 3e-27
 Identities = 28/216 (12%), Positives = 62/216 (28%), Gaps = 12/216 (5%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
              K  L    A    LG        D   RED     +      G + ILVN A   + 
Sbjct: 38  DINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYT 97

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
                          E++ +  F      L  + K           G I+ +++   + +
Sbjct: 98  SDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN--------HGHIVTVASAAGHVS 149

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGT--DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 179
             + +   ++K A     ++L  E        ++   + P  + +T  +   +     + 
Sbjct: 150 VPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFV-NTGFIKNPSTSLGPTL 208

Query: 180 ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTL 215
             + +   +           +++ S          +
Sbjct: 209 EPEEVVN-RLMHGILTEQKMIFIPSSIAFLTTLERI 243

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  103 bits (257), Expect = 4e-27
 Identities = 42/211 (19%), Positives = 66/211 (31%), Gaps = 18/211 (8%)

Query: 11  AVAALHSLGIPAIGLEGDV-RKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSP 69
           A     +  +       DV     ++ ++++   +    +DIL+N A          L  
Sbjct: 46  AELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAG--------ILDD 97

Query: 70  NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 129
           +     I I+  G        L +       +     GGII NI +   + A       S
Sbjct: 98  HQIERTIAINFTGLVNTTTAILDF-----WDKRKGGPGGIIANICSVTGFNAIHQVPVYS 152

Query: 130 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKF 189
           A+KAAV S T SLA        +    I PG    T  V               +     
Sbjct: 153 ASKAAVVSFTNSLAKLAP-ITGVTAYSINPGIT-RTPLVHTFNSWLDVEPRVAELLLSHP 210

Query: 190 GEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
            +  +        A +A    NG    +D G
Sbjct: 211 TQTSEQCGQNFVKAIEA--NKNGAIWKLDLG 239

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score =  102 bits (255), Expect = 8e-27
 Identities = 59/230 (25%), Positives = 89/230 (38%), Gaps = 22/230 (9%)

Query: 3   RRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
                +    A L +  G+  +    D+ K E    +V++ +   G++DILVN A     
Sbjct: 37  GDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHT 96

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 121
              ED     +  ++ ++    F     AL ++KK G G         IINI++     A
Sbjct: 97  ALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFG--------RIINIASAHGLVA 148

Query: 122 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181
           +  +    AAK  V   T+  ALE      I  N I PG +  T  V K           
Sbjct: 149 SANKSAYVAAKHGVVGFTKVTALETA-GQGITANAICPGWV-RTPLVEKQISALAEKNGV 206

Query: 182 DYMAAYK-----------FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           D   A +           F     +   A++LASDA   + G T+ VDGG
Sbjct: 207 DQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG 256

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  101 bits (253), Expect = 9e-27
 Identities = 53/220 (24%), Positives = 89/220 (40%), Gaps = 10/220 (4%)

Query: 11  AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNA---AAGNFLVPAEDL 67
            V  L   G   I +EGDV + ED  R V           ++  A    A   L      
Sbjct: 29  VVLDLRREGEDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPH 88

Query: 68  SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127
               FR V+E++ +GTF +   A   +++      +    G+I+N ++   +     Q  
Sbjct: 89  GLESFRRVLEVNLLGTFNVLRLAAWAMRE--NPPDAEGQRGVIVNTASVAAFEGQIGQAA 146

Query: 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 187
            +A+K  V ++T   A E    + IRV  +APG   DT  +  L  +   S A       
Sbjct: 147 YAASKGGVVALTLPAARELA-GWGIRVVTVAPGLF-DTPLLQGLPEKAKASLAAQVPFPP 204

Query: 188 KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPR 227
           + G   + A   L++  +    +NG  + +DG   ++ PR
Sbjct: 205 RLGRPEEYAALVLHILENP--MLNGEVVRLDGALRMA-PR 241

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score =  101 bits (253), Expect = 2e-26
 Identities = 45/201 (22%), Positives = 72/201 (35%), Gaps = 12/201 (5%)

Query: 28  DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87
                +    +++ +   FG+ D+LVN A+  +  P             +        + 
Sbjct: 64  SSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELF 123

Query: 88  HEALK--------YLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 139
                        + ++ G G A  S    ++N+   +           + AK A+  +T
Sbjct: 124 GSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGLT 183

Query: 140 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 199
           R+ ALE      IRVN +APG       + +   EE R K               IA A 
Sbjct: 184 RAAALELA-PRHIRVNAVAPGLSLLPPAMPQETQEEYRRKV---PLGQSEASAAQIADAI 239

Query: 200 LYLASDAGKYVNGNTLIVDGG 220
            +L S    Y+ G TL VDGG
Sbjct: 240 AFLVSKDAGYITGTTLKVDGG 260

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 99.5 bits (247), Expect = 1e-25
 Identities = 41/196 (20%), Positives = 74/196 (37%), Gaps = 15/196 (7%)

Query: 29  VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP----AEDLSPNGFRTVIEIDSVGTF 84
           V + E+   +       FG LD LV+A A            D     +   +E+ +    
Sbjct: 67  VTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLV 126

Query: 85  IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 144
            +   A   L++GG           I+ ++             ++ AKAA+++  R LA 
Sbjct: 127 AVARRAEPLLREGGG----------IVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAY 176

Query: 145 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 204
           E G    +RVN I+ GP++  A  S     ++  +        +   + ++    L+L S
Sbjct: 177 ELG-PKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLS 235

Query: 205 DAGKYVNGNTLIVDGG 220
                + G  + VD G
Sbjct: 236 PLASGITGEVVYVDAG 251

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 95.2 bits (236), Expect = 4e-24
 Identities = 38/228 (16%), Positives = 68/228 (29%), Gaps = 22/228 (9%)

Query: 2   GRRKTVLRSAVAALHS--LGIPAIGLEGDVRKREDAVRVV----ESTINHFGKLDILVNA 55
            R +++LR     L +    +  +    D+       R++    E       +  +L+N 
Sbjct: 40  ARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINN 99

Query: 56  AAGNFLVPA---EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIIN 112
           AA    V                  ++      +    L   +              ++N
Sbjct: 100 AATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLS------KTVVN 153

Query: 113 ISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK---DTAGVS 169
           IS+              A KAA D + + LA E     ++RV   APGP+          
Sbjct: 154 ISSLCALQPYKGWGLYCAGKAARDMLYQVLAAEE---PSVRVLSYAPGPLDNDMQQLARE 210

Query: 170 KLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIV 217
                E+RSK     +     +    A   L L      + +G  +  
Sbjct: 211 TSKDPELRSKLQKLKSDGALVDCGTSAQKLLGLLQKD-TFQSGAHVDF 257

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.8 bits (232), Expect = 2e-23
 Identities = 43/247 (17%), Positives = 73/247 (29%), Gaps = 53/247 (21%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
            R  T  ++AV  L + G+     + D+   +    + +     +G LD+LVN A   F 
Sbjct: 35  ARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFK 94

Query: 62  VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGI------------ 109
           V             ++ +  GT  +C E L  +K  GR    SS   +            
Sbjct: 95  VADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQ 154

Query: 110 -------------------IINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 150
                              + +    +H    W        K  V  ++R  A +     
Sbjct: 155 KFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQR 214

Query: 151 A---IRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA--SD 205
               I +N   PG ++                 TD           + A   +YLA    
Sbjct: 215 KGDKILLNACCPGWVR-----------------TDMAGPKATKSPEEGAETPVYLALLPP 257

Query: 206 AGKYVNG 212
             +  +G
Sbjct: 258 DAEGPHG 264

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.6 bits (224), Expect = 3e-22
 Identities = 39/220 (17%), Positives = 73/220 (33%), Gaps = 20/220 (9%)

Query: 2   GRRKTVLRSAVAALHSLGIP-AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60
            R K  L+  V+    LG   A  + G +     A + V       G LD+L+     N 
Sbjct: 45  ARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNT 104

Query: 61  LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 120
            +       +  R  +E++ +   ++   AL  LK+           G I+ +S+     
Sbjct: 105 SLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN---------GSIVVVSSLAGKV 155

Query: 121 ATWYQIHVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIK---------DTAGVSK 170
           A       SA+K A+D    S+  E+      + +     G I              +  
Sbjct: 156 AYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIVHMQA 215

Query: 171 LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYV 210
              EE   +     A  +    +D ++    L  +  + +
Sbjct: 216 APKEECALEIIKGGALRQEEVYYDSSLWTTLLIRNPSRKI 255

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 86.8 bits (214), Expect = 4e-21
 Identities = 36/207 (17%), Positives = 64/207 (30%), Gaps = 25/207 (12%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDS 80
            + +     ++ D V      +    K+D ++  A G                 + +   
Sbjct: 45  IVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSI 104

Query: 81  VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITR 140
             + I  H A K+LK+GG    + +   +            T   I    AK AV  + +
Sbjct: 105 WTSTISSHLATKHLKEGGLLTLAGAKAALD----------GTPGMIGYGMAKGAVHQLCQ 154

Query: 141 SLALEW-GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 199
           SLA +  G         + P  + DT    K  PE   S          +     +    
Sbjct: 155 SLAGKNSGMPSGAAAIAVLPVTL-DTPMNRKSMPEADFS---------SWTPLEFLVETF 204

Query: 200 LYLASDAGKYVNGNTLIV---DGGNWL 223
               +   +  +G+ + V   DG   L
Sbjct: 205 HDWITGNKRPNSGSLIQVVTTDGKTEL 231

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 86.1 bits (212), Expect = 9e-21
 Identities = 43/222 (19%), Positives = 77/222 (34%), Gaps = 16/222 (7%)

Query: 4   RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP 63
           +   L+  V    +     I L+ DV +      +       + K D  V++        
Sbjct: 39  QNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQ 98

Query: 64  AEDLSPN-----GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 118
            +    N     GF+   +I S     M       L  G            ++ +S    
Sbjct: 99  LDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGS----------ALLTLSYLGA 148

Query: 119 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS 178
             A      +  AKA++++  R +A   G    +RVN I+ GPI+  A        ++ +
Sbjct: 149 ERAIPNYNVMGLAKASLEANVRYMANAMG-PEGVRVNAISAGPIRTLAASGIKDFRKMLA 207

Query: 179 KATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
                    +     D+  +A +L SD    ++G  + VDGG
Sbjct: 208 HCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGG 249

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 81.2 bits (199), Expect = 9e-19
 Identities = 44/237 (18%), Positives = 85/237 (35%), Gaps = 20/237 (8%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61
                 +++ ++ + +  +        V        +V +   H+G+ D+LVN A+  + 
Sbjct: 52  PNSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYP 111

Query: 62  VPAEDLSPNGFRT--------------VIEIDSVGTFIMCHEALKYLKKGGRGQASSSSG 107
            P      +G                 +   +++  + +       +         +   
Sbjct: 112 TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGT--N 169

Query: 108 GIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG 167
             IIN+   +           + AK A++ +TRS ALE      IRVNG+ PG       
Sbjct: 170 YSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELA-PLQIRVNGVGPGLSVLVDD 228

Query: 168 VSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 224
           +     E  RSK        +     +++   ++L S   KY+ G  + VDGG  L+
Sbjct: 229 MPPAVWEGHRSKVP---LYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT 282

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 78.4 bits (192), Expect = 4e-18
 Identities = 41/205 (20%), Positives = 65/205 (31%), Gaps = 25/205 (12%)

Query: 22  AIGLEGDVRKREDAVRVVEST--INHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEI 78
            I ++G+    E    ++E T       ++D +   A G      +          +I+ 
Sbjct: 43  NILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQ 102

Query: 79  DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSI 138
               + I    A  +LK GG           +    A      T   I    AKAAV  +
Sbjct: 103 SVWSSAIAAKLATTHLKPGGL----------LQLTGAAAAMGPTPSMIGYGMAKAAVHHL 152

Query: 139 TRSLALEW-GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 197
           T SLA +  G      V  I P  + DT    K  P    S          +     I+ 
Sbjct: 153 TSSLAAKDSGLPDNSAVLTIMPVTL-DTPMNRKWMPNADHS---------SWTPLSFISE 202

Query: 198 AAL-YLASDAGKYVNGNTLIVDGGN 221
             L +    + +  +G  L +   N
Sbjct: 203 HLLKWTTETSSRPSSGALLKITTEN 227

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 78.6 bits (192), Expect = 8e-18
 Identities = 47/217 (21%), Positives = 73/217 (33%), Gaps = 7/217 (3%)

Query: 4   RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP 63
               L   V  +          E DV K E    +  S     G LD +V++ A      
Sbjct: 39  LNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEA 98

Query: 64  AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 123
            E       ++        +     E    LK          +G  ++ +S         
Sbjct: 99  LEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLN------NGASVLTLSYLGSTKYMA 152

Query: 124 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY 183
           +   +  AKAA++S  R LA++ G  + IRVN ++ GPI+  A         I       
Sbjct: 153 HYNVMGLAKAALESAVRYLAVDLG-KHHIRVNALSAGPIRTLASSGIADFRMILKWNEIN 211

Query: 184 MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
               K     ++  A +YL S     V+G    VD G
Sbjct: 212 APLRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAG 248

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.2 bits (189), Expect = 1e-17
 Identities = 29/146 (19%), Positives = 60/146 (41%), Gaps = 6/146 (4%)

Query: 72  FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 131
           F+ V++++ +GTF +       + +           G+IIN ++   +     Q   SA+
Sbjct: 109 FQRVLDVNLMGTFNVIRLVAGEMGQ--NEPDQGGQRGVIINTASVAAFEGQVGQAAYSAS 166

Query: 132 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 191
           K  +  +T  +A +      IRV  IAPG    T  ++ L  +     A+      + G+
Sbjct: 167 KGGIVGMTLPIARDLA-PIGIRVMTIAPGLF-GTPLLTSLPEKVCNFLASQVPFPSRLGD 224

Query: 192 KWDIAMAALYLASDAGKYVNGNTLIV 217
             + A     +  +   ++NG  + +
Sbjct: 225 PAEYAHLVQAIIENP--FLNGEVIRL 248

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 72.3 bits (176), Expect = 9e-16
 Identities = 37/227 (16%), Positives = 65/227 (28%), Gaps = 14/227 (6%)

Query: 8   LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK-LDILVNAAAGNFLVPAED 66
           L +A   +  + I    +  D+   E   + +   +    K +D LV  A          
Sbjct: 21  LEAAGHQIVGIDIRDAEVIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLG 80

Query: 67  ------------LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 114
                       L       + +       ++   A  +L       A +   G      
Sbjct: 81  NVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKAR 140

Query: 115 ATL-HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP 173
           A + H       +  + +K A+    R  A  WG                         P
Sbjct: 141 AIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDP 200

Query: 174 EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
               S A       +  E  ++A    +L S A  YV+G  +++DGG
Sbjct: 201 RYGESIAKFVPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGG 247

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 70.3 bits (171), Expect = 5e-15
 Identities = 24/175 (13%), Positives = 55/175 (31%), Gaps = 17/175 (9%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK--LDILVNAAAGN 59
            R         +           L   V   +     V       G   L +L+N A   
Sbjct: 36  ARDVEKATELKSIK---DSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVL 92

Query: 60  FLV-PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSG----------G 108
                  + +       +++++    ++  + L  LK     ++                
Sbjct: 93  LSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISS 152

Query: 109 IIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 163
            + +I+     +A +  +    +KAA++   R+LA++   D  + V    PG ++
Sbjct: 153 GLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLK-DDNVLVVNFCPGWVQ 206

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.4 bits (153), Expect = 2e-12
 Identities = 44/200 (22%), Positives = 80/200 (40%), Gaps = 15/200 (7%)

Query: 3   RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62
           + +  L  A  AL         L+ DVR  +      E         D+LV  A    L 
Sbjct: 40  KTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGRV--DVLVCNAGLGLLG 97

Query: 63  PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 122
           P E L  +   +V++++ VGT  M    L  +K+ G G         ++   +       
Sbjct: 98  PLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSG--------RVLVTGSVGGLMGL 149

Query: 123 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--APEEIRSKA 180
            +     A+K A++ +  SLA+     + + ++ I  GP+  TA + K+  +PEE+  + 
Sbjct: 150 PFNDVYCASKFALEGLCESLAVLLL-PFGVHLSLIECGPV-HTAFMEKVLGSPEEVLDR- 206

Query: 181 TDYMAAYKFGEKWDIAMAAL 200
           TD    ++F +    +    
Sbjct: 207 TDIHTFHRFYQYLAHSKQVF 226

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 59.4 bits (142), Expect = 4e-11
 Identities = 42/201 (20%), Positives = 66/201 (32%), Gaps = 11/201 (5%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV--PAEDLSPNGFRTVIEID 79
                             E     FG +DILV++ A    V  P  + S  G+   I   
Sbjct: 93  KANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISAS 152

Query: 80  SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 139
           S     +    L  +  GG   + +      I        ++    +            T
Sbjct: 153 SYSFVSLLSHFLPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALES---------DT 203

Query: 140 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 199
           R LA E G    IRVN I+ GP+   A  +    + +   + +     K     ++  AA
Sbjct: 204 RVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAA 263

Query: 200 LYLASDAGKYVNGNTLIVDGG 220
            +L S     + G T+ VD G
Sbjct: 264 AFLVSPLASAITGATIYVDNG 284

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 58.8 bits (140), Expect = 1e-10
 Identities = 37/244 (15%), Positives = 69/244 (28%), Gaps = 54/244 (22%)

Query: 22  AIGLEGDVRKREDAVRVVESTINHFGKLDILVN--AAAGNFLVPAEDLSPNGFRTVIEID 79
                 ++ +      V       +GK+++LV+  A A        + S  G+   +   
Sbjct: 87  KNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKS 146

Query: 80  SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 139
           S     +C   +  +K      + +      +        ++    +            T
Sbjct: 147 SYSLISLCKYFVNIMKPQSSIISLTYHASQKVVPGYGGGMSSAKAALES---------DT 197

Query: 140 RSLALEWGTDYAIRVNGIAPGPIKDTAG-------------------------------- 167
           R LA   G +Y IR+N I+ GP+K  A                                 
Sbjct: 198 RVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNS 257

Query: 168 -----------VSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLI 216
                       +    +     +  Y    +     DI   A +L S   + + G T+ 
Sbjct: 258 GEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQTIY 317

Query: 217 VDGG 220
           VD G
Sbjct: 318 VDNG 321

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 55.2 bits (131), Expect = 1e-09
 Identities = 14/77 (18%), Positives = 23/77 (29%), Gaps = 11/77 (14%)

Query: 155 NGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-----------FGEKWDIAMAALYLA 203
           N +A GPI+  A  + +                +             +   +A     L 
Sbjct: 186 NLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALL 245

Query: 204 SDAGKYVNGNTLIVDGG 220
           SD      G+ +  DGG
Sbjct: 246 SDWLPATTGDIIYADGG 262

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 50.9 bits (120), Expect = 3e-08
 Identities = 36/228 (15%), Positives = 70/228 (30%), Gaps = 28/228 (12%)

Query: 2   GRRKTVLRSAVAALHSLGIPAIGLEGDVRKRE--DAVRVVESTINHFGKLDILV-NAAAG 58
            R +   +  +  L         LE D+R  +  D +      +     L++L  NA   
Sbjct: 36  CRNREQAK-ELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIA 94

Query: 59  NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIIN------ 112
                   +        ++ ++V   ++    L  LKK  +   S   G           
Sbjct: 95  PKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSS 154

Query: 113 ISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA 172
           I  ++             +K+A+++ T+SL+++      I    + PG +  T      A
Sbjct: 155 ILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLY-PQRIMCVSLHPGWV-KTDMGGSSA 212

Query: 173 PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 220
           P ++ +                I      L        NG  +  DG 
Sbjct: 213 PLDVPTSTG------------QIVQTISKLGEK----QNGGFVNYDGT 244

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 36.4 bits (83), Expect = 0.001
 Identities = 13/129 (10%), Positives = 29/129 (22%), Gaps = 12/129 (9%)

Query: 23  IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 82
           +     V           S          +  A A    +  E L    ++    I+ V 
Sbjct: 67  VNKRFKVNVTAAETADDASRAEAVKGAHFVFTAGA----IGLELLPQAAWQNESSIEIVA 122

Query: 83  TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 142
            +               G  ++  G       A          + +   +A +  +  S 
Sbjct: 123 DYNAQPPLGI------GGIDATDKGKEYGGKRAFGALGIG--GLKLKLHRACIAKLFESS 174

Query: 143 ALEWGTDYA 151
              +  +  
Sbjct: 175 EGVFDAEEI 183

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	257
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.98
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.98
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.97
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.97
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.97
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.97
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.97
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.96
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.96
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.95
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.95
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.88
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.36
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.17
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.09
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	98.91
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	98.87
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	98.87
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	98.86
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	98.83
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	98.81
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	98.77
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.76
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.74
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.72
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	98.69
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	98.67
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	98.66
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	98.64
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	98.63
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	98.62
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	98.5
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	98.5
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	98.25
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	98.01
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	97.88
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	97.82
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	96.97
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	96.89
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	96.6
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	96.13
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	95.79
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	94.49
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	91.72
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	87.35

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=6.5e-46  Score=301.41  Aligned_cols=211  Identities=26%  Similarity=0.354  Sum_probs=198.0

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      .|+++.++++.+++++.+.++.++++|++|+++++++++++.+++|+||++|||||.....++.+.+.++|++.+++|+.
T Consensus        33 ~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~  112 (244)
T d1edoa_          33 ARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLT  112 (244)
T ss_dssp             SSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTH
T ss_pred             CCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCccccccccccccchhccchHHHHHHHhhhhh
Confidence            57888999999999988999999999999999999999999999999999999999988899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      ++++++|+++|+|++++        +|+||++||..+..+.++...|+++|+|+.+|+|+|+.|++ ++|||||+|+||+
T Consensus       113 ~~~~~~~~~~~~m~~~~--------~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ltk~lA~el~-~~gIrvN~I~PG~  183 (244)
T d1edoa_         113 GVFLCTQAATKIMMKKR--------KGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGA-SRNINVNVVCPGF  183 (244)
T ss_dssp             HHHHHHHHHHHHHHHHT--------CEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHH-TTTEEEEEEEECS
T ss_pred             hHHHHHHHHHHHHHHcC--------CcEEEEEcChhhcCCCCCCHHHHHHHHHHHHChHHHHHHHh-hhCcEEEEEecce
Confidence            99999999999999887        89999999999999999999999999999999999999999 9999999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhc-cCCCCcccCcEEEecCCccc
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA-SDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ++|++....  .++..+......|++|+.+|+|+|+++.||+ ++.++++||+++.+|||+++
T Consensus       184 i~T~~~~~~--~~~~~~~~~~~~pl~R~~~p~dvA~~v~fLa~S~~a~~itG~~i~vdGG~si  244 (244)
T d1edoa_         184 IASDMTAKL--GEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTIDGGIAI  244 (244)
T ss_dssp             BCSHHHHTT--CHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTTTTC
T ss_pred             eccHHHHHh--hHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHCCchhcCCcCCeEEeCCCeeC
Confidence            999876442  3556677778899999999999999999996 89999999999999999874

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.3e-45  Score=300.97  Aligned_cols=211  Identities=29%  Similarity=0.378  Sum_probs=196.2

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|++++++++++++++.+.++.++.+|++|+++++++++++.+++|+||++|||||.....++.+.+.++|++++++|+
T Consensus        40 ~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl  119 (251)
T d2c07a1          40 ISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNL  119 (251)
T ss_dssp             EESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHT
T ss_pred             EECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCceeeeeccccccccccccccHHHHhhhheeee
Confidence            47899999999999999889999999999999999999999999999999999999998889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .++++++++++|+|++++        .|+||++||..+..+.++...|+++|+|+.+|+|+++.|++ ++|||||+|+||
T Consensus       120 ~~~~~~~~~~~~~m~~~~--------~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~-~~gIrVN~V~PG  190 (251)
T d2c07a1         120 NSLFYITQPISKRMINNR--------YGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELA-SRNITVNAIAPG  190 (251)
T ss_dssp             THHHHHHHHHHHHHHHHT--------CEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             hhhhhhhhhcCcccccCC--------CeEEEEECCHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEccC
Confidence            999999999999999987        79999999999999999999999999999999999999999 999999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      +++|++....  .++..+.+....|++|+++|+|+|++++||+++.++++||+++.+|||++
T Consensus       191 ~v~T~~~~~~--~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~s  250 (251)
T d2c07a1         191 FISSDMTDKI--SEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGGLS  250 (251)
T ss_dssp             SBCC-----C--CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred             CEeccccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECCCcC
Confidence            9999976443  35667778888999999999999999999999999999999999999964

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.2e-45  Score=301.09  Aligned_cols=213  Identities=33%  Similarity=0.465  Sum_probs=196.4

Q ss_pred             CCCcHHHHHHHHHHHHhc-CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      ++|+.++++++.+++.+. +.++.++++|++|+++++++++++.+++|+||+||||||+....++.+.+.++|++.+++|
T Consensus        35 ~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vN  114 (251)
T d1vl8a_          35 ASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVN  114 (251)
T ss_dssp             EESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhh
Confidence            368999999999888655 7889999999999999999999999999999999999999888999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccc-ccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH-YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~-~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      +.++++++|+++|+|++++        .|+||+++|..+ ..+.++...|+++|+|+.+|+|+++.|++ ++|||||+|+
T Consensus       115 l~~~~~~~~~~~~~m~~~~--------~G~Ii~i~S~~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~-~~gIrVN~I~  185 (251)
T d1vl8a_         115 LFGTYYVCREAFSLLRESD--------NPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWG-RYGIRVNVIA  185 (251)
T ss_dssp             THHHHHHHHHHHHHHTTCS--------SCEEEEECCGGGTCCCSSSCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEE
T ss_pred             hhhhhhhhhhhhhcccccc--------cccccccccchhccccCccccchHHHHHhHHHHHHHHHHHhc-ccCeEEEEEe
Confidence            9999999999999999887        799999999766 45778889999999999999999999999 9999999999


Q ss_pred             cCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       159 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      ||+++|++........+..+.+....|++|+++|+|+|++++||+++.++++||+++.+|||++
T Consensus       186 PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~a~~itG~~i~vDGG~t  249 (251)
T d1vl8a_         186 PGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGWT  249 (251)
T ss_dssp             ECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             eCcccCHHHHhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhCCCcCcEEEeCcCee
Confidence            9999999875544445666778888999999999999999999999999999999999999976

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=1.1e-45  Score=302.91  Aligned_cols=215  Identities=33%  Similarity=0.484  Sum_probs=198.5

Q ss_pred             CCc-HHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            2 GRR-KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         2 ~r~-~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      +|+ ++.++++.+++++.+.++..++||++|+++++++++++.+++|+||++|||||+....++.+.+.++|++.+++|+
T Consensus        38 ~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl  117 (261)
T d1geea_          38 YRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNL  117 (261)
T ss_dssp             ESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             eCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhc
Confidence            565 4578999999999999999999999999999999999999999999999999998889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .++++++++++|+|.+++.       ++.|+++||.++..+.+++..|+++|+|+.+|+++|+.|++ ++|||||+|+||
T Consensus       118 ~g~~~~~~~~~~~m~~~~~-------g~~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~-~~gIrVN~I~PG  189 (261)
T d1geea_         118 TGAFLGSREAIKYFVENDI-------KGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYA-PKGIRVNNIGPG  189 (261)
T ss_dssp             HHHHHHHHHHHHHHHHTTC-------CCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEEC
T ss_pred             ccchhHHHHHhhhhccccc-------cccccccccchhcccCccccccccCCccchhhHHHHHHHhh-hhCcEEEEEeeC
Confidence            9999999999999998762       45699999999999999999999999999999999999999 999999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      +++|++.......++..+.+....|++|+.+|+|+|++++||+++.++++||+++.+|||+++.
T Consensus       190 ~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~sl~  253 (261)
T d1geea_         190 AINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMTLY  253 (261)
T ss_dssp             SBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             cCcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCCeeCC
Confidence            9999986554444566677788889999999999999999999999999999999999999885

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.2e-45  Score=297.93  Aligned_cols=211  Identities=30%  Similarity=0.451  Sum_probs=197.2

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|++++++++.+++++.+.++.+++||++++++++++++++.+++|+||++|||||+....++ +.+.++|++.+++|+
T Consensus        41 ~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~-e~~~e~~~~~~~vNl  119 (255)
T d1fmca_          41 SDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNV  119 (255)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHT
T ss_pred             EECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEeeeCCcCCCCCcc-cCCHHHHHHHHHHHH
Confidence            3689999999999999999999999999999999999999999999999999999998777665 789999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .++++++|+++|+|.+++        +|+||++||..+..+.+++..|+++|+|+.+|+|+++.|++ ++|||||+|+||
T Consensus       120 ~~~~~~~~~~~~~m~~~~--------~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~-~~gIrVN~I~PG  190 (255)
T d1fmca_         120 FSFFHLSQLVAPEMEKNG--------GGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLG-EKNIRVNGIAPG  190 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHH-TTTEEEEEEEEC
T ss_pred             HHhhhhHHHHHhhhcccc--------ccccccccccchhccccccccchhHHHHHHHHHHHHHHHhC-ccCeEEEEeeeC
Confidence            999999999999999987        78999999999999999999999999999999999999999 999999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      +++|++...... ++..+.+....|++|+++|+|+|++++||+++.++|+||+++.+|||..
T Consensus       191 ~i~T~~~~~~~~-~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~vDGG~~  251 (255)
T d1fmca_         191 AILTDALKSVIT-PEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQILTVSGGGV  251 (255)
T ss_dssp             SBCSHHHHTTCC-HHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred             cCcChHhhccCC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCcc
Confidence            999987655543 5566777788999999999999999999999999999999999999964

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=2.8e-45  Score=299.85  Aligned_cols=215  Identities=25%  Similarity=0.331  Sum_probs=196.2

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|++++++++.+++.+.+.++.+++||++|+++++++++++.++||+||+||||||+....++.+.+.++|++++++|+
T Consensus        31 ~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl  110 (255)
T d1gega_          31 ADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINV  110 (255)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHT
T ss_pred             EECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccEEEecccccccCcHHHhhhhhhhhhhhhcc
Confidence            47999999999999999999999999999999999999999999999999999999998889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .|+++++|+++|+|.+++.       .++|+++||..+..+.++.+.|+++|+|+.+|+|+|+.|++ ++|||||+|+||
T Consensus       111 ~g~~~~~~~~~~~m~~~~~-------~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA~el~-~~gIrVN~I~PG  182 (255)
T d1gega_         111 KGVIWGIQAAVEAFKKEGH-------GGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLA-PLGITVNGYCPG  182 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHTS-------CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             cchhhhhhhhcchhhhhcc-------ccccccccchhhcccCcccccchhCHHHHHhhHHHHHHHhh-hhCcEEEEEecC
Confidence            9999999999999887652       68899999999999999999999999999999999999999 999999999999


Q ss_pred             cccCCCCCCCC---------ChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          161 PIKDTAGVSKL---------APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       161 ~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +++|++.....         ........+....|++|+++|+|+|+.++||+++.++++||+.+.+|||+.+
T Consensus       183 ~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG~~~  254 (255)
T d1gega_         183 IVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGMVF  254 (255)
T ss_dssp             SBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSSC
T ss_pred             cccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCccCcEEEecCCEEe
Confidence            99998643211         1123345566778999999999999999999999999999999999999754

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=2.1e-45  Score=301.07  Aligned_cols=213  Identities=26%  Similarity=0.334  Sum_probs=197.6

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|++++++++.+++.+.+.++.++++|++|+++++.+++++.++||+||+||||||+....++.+.+.++|++++++|+
T Consensus        32 ~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl  111 (257)
T d2rhca1          32 CARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNL  111 (257)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHT
T ss_pred             EECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHh
Confidence            47999999999999999999999999999999999999999999999999999999998889999999999999999999


Q ss_pred             HHHHHHHHHHHHH--HHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 025124           81 VGTFIMCHEALKY--LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA  158 (257)
Q Consensus        81 ~~~~~l~~~~~~~--~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~  158 (257)
                      .++++++|+++|+  |.+++        .|+||+++|..+..+.++...|+++|+|+.+|+|+|+.|++ ++|||||+|+
T Consensus       112 ~g~~~~~~~~~p~~~~~~~~--------~g~Ii~i~S~~~~~~~~~~~~Y~asKaal~~ltk~lA~el~-~~gIrVN~I~  182 (257)
T d2rhca1         112 TGVFRVTKQVLKAGGMLERG--------TGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELA-RTGITVNAVC  182 (257)
T ss_dssp             HHHHHHHHHHHTTTSHHHHT--------EEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTT-TSEEEEEEEE
T ss_pred             hhhhHHHHHHhHHHHHHhcC--------CcccccccccccccccccchhHHHHHHHHHHHHHHHHHHhh-hhCcEEEEEe
Confidence            9999999999997  55655        68999999999999999999999999999999999999999 9999999999


Q ss_pred             cCcccCCCCCC---------CCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          159 PGPIKDTAGVS---------KLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       159 Pg~v~t~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      ||+++|+|...         ....++..+.+....|++|+++|+|+|+.++||+|+.++++||+++.+|||+.
T Consensus       183 PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~~  255 (257)
T d2rhca1         183 PGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGLG  255 (257)
T ss_dssp             ECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCC
T ss_pred             eCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCceEEECcCcc
Confidence            99999987532         23345667778888999999999999999999999999999999999999963

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.2e-45  Score=302.35  Aligned_cols=220  Identities=25%  Similarity=0.357  Sum_probs=171.4

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHh-CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      ++|++++++++.+++.+.+.++..+.||++++++++++++++.+++ |+||++|||||+....++.+.+.++|++++++|
T Consensus        38 ~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vN  117 (259)
T d1xq1a_          38 CARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTN  117 (259)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHH
Confidence            4799999999999999988899999999999999999999999998 689999999999888999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.++++++|+++|+|++++        .|+||++||..+..+.++...|+++|+|+.+|+|+++.|++ ++|||||+|+|
T Consensus       118 l~g~~~~~~~~~~~m~~~~--------~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~-~~gIrVN~V~P  188 (259)
T d1xq1a_         118 LESAYHLSQLAHPLLKASG--------CGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWA-SDGIRANAVAP  188 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHS--------SCEEEEEC----------CCHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEC
T ss_pred             hhhheeeehhhhhcccccc--------cccccccccccccccccccccccccccchhhhhHHHHHHhc-ccCeEEEEecc
Confidence            9999999999999999887        79999999999999999999999999999999999999999 99999999999


Q ss_pred             CcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCc
Q 025124          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLP  230 (257)
Q Consensus       160 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~  230 (257)
                      |+++|++..... .++..+......|++|+++|+|+|++++||+++.++++||+.+.+|||+++....+.|
T Consensus       189 G~i~T~~~~~~~-~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~iTG~~i~vDGG~s~~g~~~~p  258 (259)
T d1xq1a_         189 AVIATPLAEAVY-DDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITGQTICVDGGLTVNGFSYQP  258 (259)
T ss_dssp             CSCC--------------------------CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCEEETTEEECC
T ss_pred             CcccCHHhhhhc-hHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCCcCcEEEeCCCEECCCCCCCC
Confidence            999999765433 3445566677889999999999999999999999999999999999999987766654

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.8e-45  Score=297.52  Aligned_cols=209  Identities=26%  Similarity=0.315  Sum_probs=193.9

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|++++++++.+++.   .++..+.+|++|+++++++++++.+++|+||++|||||.....++.+.+.++|++.+++|+
T Consensus        34 ~~r~~~~l~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl  110 (243)
T d1q7ba_          34 TATSENGAQAISDYLG---ANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNL  110 (243)
T ss_dssp             EESSHHHHHHHHHHHG---GGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             EeCCHHHHHHHHHHhC---CCCcEEEEEecCHHHhhhhhhhhhcccCCcceehhhhhhccccccccccccccccccceee
Confidence            3789999999888874   4688899999999999999999999999999999999998889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .++++++|+++|+|++++        +|+||++||..+..+.++.+.|+++|+|+.+|+|+++.|++ ++|||||+|+||
T Consensus       111 ~~~~~~~~~~~~~m~~~~--------~G~II~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~ela-~~gIrVN~I~PG  181 (243)
T d1q7ba_         111 SSVFRLSKAVMRAMMKKR--------HGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVA-SRGITVNVVAPG  181 (243)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             chhhhhHHHHHHHHHHcC--------CCEeeeecchhhcCCCCCCHHHHHHHHHHHHHHHHHHHHhC-ccCeEEEEEecc
Confidence            999999999999999987        79999999999999999999999999999999999999999 999999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +++|++.....  ++..+......|++|+.+|+|+|+.++||+++.++++||+++.+|||+++
T Consensus       182 ~i~T~~~~~~~--~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itGq~i~vdGG~~~  242 (243)
T d1q7ba_         182 FIETDMTRALS--DDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLHVNGGMYM  242 (243)
T ss_dssp             SBCCHHHHTSC--HHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             eEechhhhhhh--hhHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCCeEe
Confidence            99998764432  44556677788999999999999999999999999999999999999876

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=1.4e-44  Score=296.56  Aligned_cols=213  Identities=26%  Similarity=0.335  Sum_probs=188.2

Q ss_pred             CCc-HHHHHHHHHHHHhc-CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            2 GRR-KTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         2 ~r~-~~~l~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      +|+ .+.++++.+++.+. +.++.++++|++|+++++++++++.+++|+||+||||||+....++.+.+.++|++++++|
T Consensus        35 ~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vN  114 (260)
T d1x1ta1          35 GFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALN  114 (260)
T ss_dssp             CCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred             eCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhcc
Confidence            565 67788998888765 7789999999999999999999999999999999999999888999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.++++++++++|+|++++        .|+||++||..+..+.+++..|+++|+|+.+|+++++.|++ ++|||||+|+|
T Consensus       115 l~g~~~~~~~~~~~m~~~~--------~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~-~~gIrVN~I~P  185 (260)
T d1x1ta1         115 LSAVFHGTAAALPHMKKQG--------FGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETA-GQGITANAICP  185 (260)
T ss_dssp             THHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHT-TTTEEEEEEEE
T ss_pred             ccccccccchhhhhHhhcC--------CceEeecccccceeccCCcchhhhhhhhHHHhHHHHHHHhc-hhCcEEEEEec
Confidence            9999999999999999987        79999999999999999999999999999999999999999 99999999999


Q ss_pred             CcccCCCCCCCCCh----------HHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          160 GPIKDTAGVSKLAP----------EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       160 g~v~t~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      |+++|++.......          ....+.+....|++|+++|+|+|++++||+++.++|+||+++.+|||++.
T Consensus       186 G~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~a~~itG~~i~vDGG~ta  259 (260)
T d1x1ta1         186 GWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGWTA  259 (260)
T ss_dssp             CCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCCCcCCEEEECcchhc
Confidence            99999986543211          12234466778999999999999999999999999999999999999764

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=8e-45  Score=295.61  Aligned_cols=210  Identities=29%  Similarity=0.372  Sum_probs=178.0

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+++  ++..+.+++.+.++.++.||++|+++++++++++.+++|+||++|||||+....++.+.+.++|++++++|+.
T Consensus        36 ~~~~~--~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~  113 (247)
T d2ew8a1          36 DLVPA--PEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVD  113 (247)
T ss_dssp             ESSCC--HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTH
T ss_pred             ECCch--HHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehh
Confidence            45543  2344556777889999999999999999999999999999999999999988899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      ++++++|+++|+|++++        .|+||++||..+..+.++...|+++|+|+.+|+++++.|++ ++|||||+|+||+
T Consensus       114 ~~~~~~~~~~~~m~~~~--------~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA~ela-~~gIrVN~I~PG~  184 (247)
T d2ew8a1         114 SGFLMAKAFVPGMKRNG--------WGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLG-KDGITVNAIAPSL  184 (247)
T ss_dssp             HHHHHHHHHHHHHHHHT--------CEEEEEECCGGGGSCCSSCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECC
T ss_pred             hhhHHHHHHHhHHHhcC--------CCCccccccchhcccCcccccchhhhccHHHHHHHHHHHhc-ccCeEEEEEeeCC
Confidence            99999999999999987        79999999999999999999999999999999999999999 9999999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      ++|++..................+++++++|+|+|+.++||+++.++|+||+++.+|||++
T Consensus       185 i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~~  245 (247)
T d2ew8a1         185 VRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQTLAVDGGMV  245 (247)
T ss_dssp             C------------------CTTSSSCSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSSCC
T ss_pred             CCCccccccccchhHHHHHHHhccCCCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCCEe
Confidence            9999875544333332333344578899999999999999999999999999999999975

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=1e-44  Score=296.97  Aligned_cols=214  Identities=29%  Similarity=0.403  Sum_probs=198.1

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC-CccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG-KLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      ++|++++++++.+++.+.+.++.++.||++|+++++++++++.++++ ++|++|||||+....++.+.+.++|++++++|
T Consensus        38 ~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vN  117 (259)
T d2ae2a_          38 CSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSIN  117 (259)
T ss_dssp             EESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcc
Confidence            37999999999999999888999999999999999999999999987 79999999999888999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.++++++++++|+|+++.        +|+||+++|..+..+.++...|+++|+|+.+|+|+++.|++ ++|||||+|+|
T Consensus       118 l~~~~~~~~~~~~~m~~~~--------~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~-~~gIrVN~I~P  188 (259)
T d2ae2a_         118 FEAAYHLSVLAHPFLKASE--------RGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWA-KDNIRVNGVGP  188 (259)
T ss_dssp             THHHHHHHHHHHHHHHHTS--------SEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEE
T ss_pred             cceeEEEEeeccchhhhhc--------ccccccccccccccccccccchHHHHHHHHHHHHHHHHHhC-cCceEEEEeee
Confidence            9999999999999999987        79999999999999999999999999999999999999999 99999999999


Q ss_pred             CcccCCCCCCCCCh---HHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          160 GPIKDTAGVSKLAP---EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       160 g~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      |+++|++.......   ++..+.+....|++|+++|+|+|++++||+++.++|+||+++.+|||++.
T Consensus       189 G~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~a  255 (259)
T d2ae2a_         189 GVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGLMA  255 (259)
T ss_dssp             CSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECCCeEe
Confidence            99999875433322   34455667788999999999999999999999999999999999999865

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=1.6e-44  Score=296.10  Aligned_cols=211  Identities=23%  Similarity=0.375  Sum_probs=196.1

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n   79 (257)
                      ++|++++++++.+++.+.+.++..+.||++|+++++++++++.+++|+||++|||||... ..++.+.+.++|++.+++|
T Consensus        35 ~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vn  114 (260)
T d1zema1          35 LDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTIN  114 (260)
T ss_dssp             EESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCeehhhhccccccCccccccHHHHHhhcccc
Confidence            478999999999999998999999999999999999999999999999999999999765 4789999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.++++++++++|+|.++.        .|+||++||..+..+.+++..|+++|+|+.+|+|+++.|++ ++|||||+|+|
T Consensus       115 l~~~~~~~~~~~~~m~~~~--------~G~II~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA~el~-~~gIrVN~I~P  185 (260)
T d1zema1         115 VTGAFHVLKAVSRQMITQN--------YGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLA-PYNIRVNAISP  185 (260)
T ss_dssp             THHHHHHHHHHHHHHHHHT--------CEEEEEECCHHHHSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEE
T ss_pred             ccccccchhhHHhhhhhhc--------CCCCCeeechhhccCCcchHHHHHHHHHHHHHHHHHHHHhh-hhCCEEEEecc
Confidence            9999999999999999887        89999999999999999999999999999999999999999 99999999999


Q ss_pred             CcccCCCCCC--------------CCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCC
Q 025124          160 GPIKDTAGVS--------------KLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG  220 (257)
Q Consensus       160 g~v~t~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg  220 (257)
                      |+++|++...              ...++...+.+....|++|+++|+|+|.+++||+++.++++||+++.+|||
T Consensus       186 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         186 GYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             CSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             CcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence            9999986421              223455667778889999999999999999999999999999999999998

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=1.9e-44  Score=295.01  Aligned_cols=214  Identities=27%  Similarity=0.386  Sum_probs=195.2

Q ss_pred             CCCcHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIE   77 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~   77 (257)
                      ++|+.++++++.+++.+.  +.++..++||++|+++++++++++.+++|+||+||||||+.. ..++.+++.++|+++++
T Consensus        34 ~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~  113 (258)
T d1iy8a_          34 VDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVS  113 (258)
T ss_dssp             EESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhh
Confidence            368999999999998766  457899999999999999999999999999999999999764 46789999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEE
Q 025124           78 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (257)
Q Consensus        78 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v  157 (257)
                      +|+.++++++|+++|+|+++.        +|+||++||..+..+.++...|+++|+|+.+|+|+|+.|++ ++|||||+|
T Consensus       114 vNl~g~~~~~~~~~~~m~~~~--------~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~-~~gIrVN~i  184 (258)
T d1iy8a_         114 INLRGVFLGLEKVLKIMREQG--------SGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYG-RYGIRINAI  184 (258)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHT--------CCEEEEECCGGGTSBCSSBHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEE
T ss_pred             hhccchhhhhhhhHhhhhhhc--------CCCCcccccHhhccCCCCchHHHHHHHHHHHHHHHHHHHhC-ccCceEEEE
Confidence            999999999999999999887        89999999999999999999999999999999999999999 999999999


Q ss_pred             ecCcccCCCCCCC------CChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          158 APGPIKDTAGVSK------LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       158 ~Pg~v~t~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +||+++|+|....      ...+...+.+....|++|+++|+|+|+.++||+++.++++||+++.+|||++.
T Consensus       185 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fL~S~~s~~itG~~i~VDGG~sa  256 (258)
T d1iy8a_         185 APGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQSA  256 (258)
T ss_dssp             EECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             eeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCceEEcCcchhc
Confidence            9999999875322      12345566677888999999999999999999999999999999999999864

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=7.5e-44  Score=291.41  Aligned_cols=212  Identities=29%  Similarity=0.399  Sum_probs=192.0

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|+.++++++.+++   +.++.+++||++|+++++++++++.+++|+||++|||||+....++.+.+.++|++.+++|+
T Consensus        35 ~~r~~~~l~~~~~~~---~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl  111 (256)
T d1k2wa_          35 ADINLEAARATAAEI---GPAACAIALDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINV  111 (256)
T ss_dssp             EESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             EECCHHHHHHHHHHh---CCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEEEeecccccccccccCCHHHHHhhhceee
Confidence            368899888887776   67899999999999999999999999999999999999998889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .|+++++++++|.|.++++       .|+||++||..+..+.++.+.|+++|+|+.+|+++++.|++ ++|||||+|+||
T Consensus       112 ~g~~~~~~~~~~~~~~~~~-------~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~-~~gIrVN~V~PG  183 (256)
T d1k2wa_         112 SGTLFMMQAVARAMIAGGR-------GGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLI-RHGINVNAIAPG  183 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHTS-------CEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             eccccchhhccchhHHhcc-------CCccccccchhhccccccccchhhhhhHHHHHHHHHHHHhc-ccCeEEEEEecC
Confidence            9999999999998776542       69999999999999999999999999999999999999999 999999999999


Q ss_pred             cccCCCCCCC---------CChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          161 PIKDTAGVSK---------LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       161 ~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +++|++....         ....+..+.+....|++|+++|+|+|.+++||+++.++|+||+.+.+|||.++
T Consensus       184 ~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~fL~S~~a~~iTG~~i~vDGG~~m  255 (256)
T d1k2wa_         184 VVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATPEADYIVAQTYNVDGGNWM  255 (256)
T ss_dssp             CBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHHHTTSGGGTTCCSCEEEESTTSSC
T ss_pred             CCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCccCceEEECcchhh
Confidence            9999974321         12234455667778999999999999999999999999999999999999876

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=1.3e-43  Score=289.08  Aligned_cols=213  Identities=26%  Similarity=0.338  Sum_probs=193.1

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|++++++++.+++.. +.++.++.||++|+++++++++++.+++|+||+||||||.....++.+.+.++|++++++|+
T Consensus        36 ~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl  114 (251)
T d1zk4a1          36 TGRHSDVGEKAAKSVGT-PDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNL  114 (251)
T ss_dssp             EESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHT
T ss_pred             EECCHHHHHHHHHHhCC-CCcEEEEEccCCCHHHHHHHHHHHHHHhCCceEEEeccccccccchhcccccchhhhccccc
Confidence            37899999999988854 56899999999999999999999999999999999999998889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHH--hcCCCCeEEEEEe
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE--WGTDYAIRVNGIA  158 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e--~~~~~gi~v~~v~  158 (257)
                      .++++++++++|+|++++.       +|+||++||..+..+.++...|+++|+|+.+|+++++.|  +. ++|||||+|+
T Consensus       115 ~g~~~~~~~~~~~m~~~~~-------gg~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~l~-~~gIrVN~I~  186 (251)
T d1zk4a1         115 DGVFFGTRLGIQRMKNKGL-------GASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALK-DYDVRVNTVH  186 (251)
T ss_dssp             HHHHHHHHHHHHHHTTSSS-------CEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEEE
T ss_pred             cccchhHHHHHHHHHhcCC-------CCceEeeeccceeccCCCchhHHHHHHHHhcchHHHHHHHhcC-CCcEEEEEEe
Confidence            9999999999999998762       358999999999999999999999999999999999998  56 8899999999


Q ss_pred             cCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       159 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ||+++|++...... .+.........|++|+++|+|+|+.++||+++.++|+||+.+.+|||++.
T Consensus       187 PG~i~T~~~~~~~~-~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~ta  250 (251)
T d1zk4a1         187 PGYIKTPLVDDLPG-AEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATGSEFVVDGGYTA  250 (251)
T ss_dssp             ECCBCCHHHHTSTT-HHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCChhHHhcCC-HHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECccccc
Confidence            99999988655443 34444556678999999999999999999999999999999999999763

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=9.6e-44  Score=288.19  Aligned_cols=205  Identities=28%  Similarity=0.326  Sum_probs=188.3

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|++++++++++++.   .++.+++||++|+++++++++++.+++|++|++|||||.....++.+.+.++|++++++|+
T Consensus        36 ~~r~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl  112 (244)
T d1nffa_          36 GDILDEEGKAMAAELA---DAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNL  112 (244)
T ss_dssp             EESCHHHHHHHHHHTG---GGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHT
T ss_pred             EECCHHHHHHHHHHhh---CcceEEEeecCCHHHHHHHHHHHHHHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhccc
Confidence            3688999988887764   4688999999999999999999999999999999999998889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .++++++|+++|.|.+++        +|+||++||..+..+.+++..|+++|+|+.+|+|+++.|++ ++|||||+|+||
T Consensus       113 ~~~~~~~~~~~~~m~~~~--------~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA~el~-~~gIrVN~I~PG  183 (244)
T d1nffa_         113 TGVFLGIRAVVKPMKEAG--------RGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELG-PSGIRVNSIHPG  183 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             chhhHHHHHHHhHHHhcC--------cceEEeccccccccccccccchhhHHHHHHHHHHHHHHHhc-ccCEEEEEEeeC
Confidence            999999999999999987        79999999999999999999999999999999999999999 999999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      +++|++.....       ......|++|+++|+|+|++++||+++.++++||+++.+|||++..
T Consensus       184 ~i~T~~~~~~~-------~~~~~~pl~R~~~p~diA~~v~fL~s~~s~~itG~~i~vDGG~~ag  240 (244)
T d1nffa_         184 LVKTPMTDWVP-------EDIFQTALGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGGTVAG  240 (244)
T ss_dssp             CBCSGGGTTSC-------TTCSCCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred             CccChhHhhhh-------HHHHhccccCCCCHHHHHHHHHHHhChhhCCCcCCEEEECCCeecc
Confidence            99998754321       1234568899999999999999999999999999999999998754

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=4.8e-43  Score=284.10  Aligned_cols=207  Identities=29%  Similarity=0.396  Sum_probs=187.6

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|++++++++.+++     +.+++.||++|+++++++++++.+++|+||++|||||+....++.+.+.++|++.+++|+
T Consensus        35 ~~r~~~~l~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl  109 (242)
T d1ulsa_          35 CDIEEGPLREAAEAV-----GAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNL  109 (242)
T ss_dssp             EESCHHHHHHHHHTT-----TCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEECCcccccCchhhCcchhhhccccccc
Confidence            368888888876654     467899999999999999999999999999999999998889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .++++++|+++|.|.+++        .+.++++|| .+..+.++...|+++|+|+.+|+|+++.|++ ++|||||+|+||
T Consensus       110 ~~~~~~~~~~~~~m~~~~--------~~~i~~~ss-~~~~~~~~~~~Y~asKaal~~ltk~lA~ela-~~gIrVN~I~PG  179 (242)
T d1ulsa_         110 TGSFLVAKAASEAMREKN--------PGSIVLTAS-RVYLGNLGQANYAASMAGVVGLTRTLALELG-RWGIRVNTLAPG  179 (242)
T ss_dssp             HHHHHHHHHHHHHHTTTC--------CEEEEEECC-GGGGCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             hhhhhhhhhccccccccc--------cceeeeecc-ccccCCCCCcchHHHHHHHHHHHHHHHHHHh-hhCcEEEEEeeC
Confidence            999999999999999876        677777776 4677888999999999999999999999999 999999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      +++|++....  .+...+......|++|+.+|+|+|++++||+++.++++||+++.+|||+++.
T Consensus       180 ~v~T~~~~~~--~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~t~g  241 (242)
T d1ulsa_         180 FIETRMTAKV--PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQVLFVDGGRTIG  241 (242)
T ss_dssp             SBCCTTTSSS--CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTTT
T ss_pred             cccChhhhcC--CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhchhhCCCCCcEEEECCCccCC
Confidence            9999976432  4666777888899999999999999999999999999999999999998763

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=5e-44  Score=291.50  Aligned_cols=210  Identities=30%  Similarity=0.299  Sum_probs=188.4

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|++++++++++++   +.++.+++||++++++++++++++.+++|+||++|||||+....++.+.+.++|++++++|+
T Consensus        35 ~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~  111 (254)
T d1hdca_          35 ADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINL  111 (254)
T ss_dssp             EESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHT
T ss_pred             EECCHHHHHHHHHHh---CCceEEEEcccCCHHHHHHHHHHHHHHcCCccEEEecCccccccccccccccccchhhhHHh
Confidence            368888888776655   56799999999999999999999999999999999999998889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .++++++++++|+|++++        .|+||++||..+..+.++.+.|+++|+|+.+|+|+|+.|++ ++|||||+|+||
T Consensus       112 ~~~~~~~~~~~p~m~~~~--------~G~II~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~a-~~gIrVN~I~PG  182 (254)
T d1hdca_         112 TGVFIGMKTVIPAMKDAG--------GGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELG-TDRIRVNSVHPG  182 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             hHHHHHHHHHHHHHhhcC--------CCeecccccchhcccccchhhHHHHHHHHHHHHHHHHHHhC-CCceEEEEeeeC
Confidence            999999999999999987        79999999999999999999999999999999999999999 999999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCC-CHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFG-EKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      +++|++......  +..+......|++|++ +|+|+|++++||+++.++++||+++.+|||++..
T Consensus       183 ~v~T~~~~~~~~--~~~~~~~~~~pl~R~g~~PedvA~~v~fL~S~~a~~itG~~i~vDGG~t~g  245 (254)
T d1hdca_         183 MTYTPMTAETGI--RQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGGWTTG  245 (254)
T ss_dssp             SBCCHHHHHHTC--CCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTTS
T ss_pred             cccCccchhcCH--HHHHHHHhCCCCCCCCCCHHHHHHHHHHHhchhhCCCCCceEEeCCCccCC
Confidence            999986532211  1123344567888886 6999999999999999999999999999998764

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=5e-43  Score=284.88  Aligned_cols=207  Identities=29%  Similarity=0.403  Sum_probs=182.5

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+++.++ +.+++     ...+++||++|+++++++++++.+++|+||+||||||+....++.+.+.++|++++++|+.
T Consensus        36 ~~~~~~~~-~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~  109 (248)
T d2d1ya1          36 DLRPEGKE-VAEAI-----GGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLT  109 (248)
T ss_dssp             ESSTTHHH-HHHHH-----TCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTH
T ss_pred             ECCHHHHH-HHHHc-----CCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhh
Confidence            56665433 33332     3467899999999999999999999999999999999988899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      ++++++|+++|+|++++        .|+||+++|..+..+.++...|+++|+|+.+|+|+++.|++ ++|||||+|+||+
T Consensus       110 g~~~~~~~~~p~m~~~~--------~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA~el~-~~gIrVN~I~PG~  180 (248)
T d2d1ya1         110 APMHLSALAAREMRKVG--------GGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLA-PLRIRVNAVAPGA  180 (248)
T ss_dssp             HHHHHHHHHHHHHHTTT--------CEEEEEECCGGGTSBCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECS
T ss_pred             hHhhhhhhhcccccccc--------cccccccccccccccccccchhHHHHHHHHHHHHHHHHHhh-hhCcEEEEEeeCC
Confidence            99999999999999987        79999999999999999999999999999999999999999 9999999999999


Q ss_pred             ccCCCCCCCC----ChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          162 IKDTAGVSKL----APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       162 v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ++|++.....    ..+...+.+....|++|+.+|+|+|+.++||+++.++++||+.+.+|||++.
T Consensus       181 v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~ta  246 (248)
T d2d1ya1         181 IATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITGAILPVDGGMTA  246 (248)
T ss_dssp             BCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEcCcCccc
Confidence            9998753321    2334556677788999999999999999999999999999999999999864

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.2e-43  Score=284.51  Aligned_cols=209  Identities=30%  Similarity=0.424  Sum_probs=186.0

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n   79 (257)
                      ++|++++++++.+++    .++.++.||++|+++++++++++.+++|+||++|||||... ..++.+.+.++|++++++|
T Consensus        36 ~~r~~~~~~~~~~~~----~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vN  111 (250)
T d1ydea1          36 CDKDESGGRALEQEL----PGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELN  111 (250)
T ss_dssp             EESCHHHHHHHHHHC----TTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHhc----CCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEEecccccccccccccccHHHHHHHHHHh
Confidence            368888888776664    46889999999999999999999999999999999999654 5678899999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.++++++++++|+|+++         +|+||++||..+..+.++...|+++|+|+.+|+|+++.|++ ++|||||+|+|
T Consensus       112 l~g~~~~~~~~~p~m~~~---------~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~a-~~gIrVN~I~P  181 (250)
T d1ydea1         112 LLGTYTLTKLALPYLRKS---------QGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDES-PYGVRVNCISP  181 (250)
T ss_dssp             THHHHHHHHHHHHHHHHH---------TCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEE
T ss_pred             hhhHHHHHHHhhHHHHhC---------CCCCcccccccccccccCcchhHHHHhhHHHHHHHHHHHhc-ccCeEEEEEee
Confidence            999999999999999875         58999999999999999999999999999999999999999 99999999999


Q ss_pred             CcccCCCCCCC----CChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          160 GPIKDTAGVSK----LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       160 g~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      |+++|++....    .......+......|++|+++|+|+|++++||+++ ++|+||+++.+|||+++.
T Consensus       182 G~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v~fL~Sd-a~~itG~~i~vDGG~~lG  249 (250)
T d1ydea1         182 GNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANFCTGIELLVTGGAELG  249 (250)
T ss_dssp             CSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHH-CTTCCSCEEEESTTTTSC
T ss_pred             CCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc-cCCCcCCeEEECCCcccC
Confidence            99999875321    12344455666677999999999999999999986 789999999999998874

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=2.9e-42  Score=283.88  Aligned_cols=216  Identities=26%  Similarity=0.302  Sum_probs=189.0

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCC--CCCCCCHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV--PAEDLSPNGFRTVIEI   78 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~   78 (257)
                      ++|++++++++++++... .++.++.||++|+++++++++++.+++|+||++|||||+....  .+.+.+.++|++++++
T Consensus        36 ~~r~~~~~~~~~~~l~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~v  114 (268)
T d2bgka1          36 ADIADDHGQKVCNNIGSP-DVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDI  114 (268)
T ss_dssp             EESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHhcCC-CceEEEEccCCCHHHHHHHHHHHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHH
Confidence            478999999999998654 4688899999999999999999999999999999999976543  5789999999999999


Q ss_pred             HhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccccccc-chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEE
Q 025124           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (257)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~-~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v  157 (257)
                      |+.++++++|+++|+|.+++        .|+||+++|..+..+.++ ...|+++|+|+.+|+++++.|++ ++|||||+|
T Consensus       115 Nl~g~~~~~~~~~~~m~~~~--------~g~ii~iss~~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~-~~gIrVN~I  185 (268)
T d2bgka1         115 NVYGAFLVAKHAARVMIPAK--------KGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELG-EYGIRVNCV  185 (268)
T ss_dssp             HTHHHHHHHHHHHHHHGGGT--------CEEEEEECCGGGTCCCTTSCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEE
T ss_pred             hhcchhhhhhhhcchHhhcC--------CCCccccccccccccccccccccchhHHHHHhCHHHHHHHhC-hhCeEEEec
Confidence            99999999999999999887        799999999998887665 45899999999999999999999 999999999


Q ss_pred             ecCcccCCCCCCCCChH-HHHHH--hhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCC
Q 025124          158 APGPIKDTAGVSKLAPE-EIRSK--ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNP  226 (257)
Q Consensus       158 ~Pg~v~t~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~  226 (257)
                      +||+++|++........ ...+.  .....+.+++.+|+|+|++++||+++.++++||+++.+|||++..+|
T Consensus       186 ~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~itGq~i~VDGG~t~~~p  257 (268)
T d2bgka1         186 SPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNP  257 (268)
T ss_dssp             EESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCT
T ss_pred             CCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHHHHHhChhhCCccCceEEECcCcccCCC
Confidence            99999999876554322 22222  22234678999999999999999999999999999999999998865

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=5.2e-42  Score=280.53  Aligned_cols=215  Identities=24%  Similarity=0.336  Sum_probs=195.7

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHh-CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      ++|++++++++.+++.+.+..++++.||++++++++++++++.+++ +.+|++|||||.....++.+.+.++|++++++|
T Consensus        36 ~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n  115 (258)
T d1ae1a_          36 CSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTN  115 (258)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCCcEEEeccccccccCccccCCHHHHhhhhhhc
Confidence            4799999999999999999999999999999999999999999998 589999999999888999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.+++.++++++|.|.++.        .|+||++||..+..+.+++..|+++|+|+++|+|.++.|++ ++|||||+|+|
T Consensus       116 l~~~~~~~~~~~~~m~~~~--------~g~ii~isS~~~~~~~~~~~~Y~~sK~al~~lt~~lA~el~-~~gIrvN~I~P  186 (258)
T d1ae1a_         116 FEAAYHLSQIAYPLLKASQ--------NGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWA-KDNIRVNSVAP  186 (258)
T ss_dssp             THHHHHHHHHHHHHHHHHT--------SEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEE
T ss_pred             ccccccccccccccccccc--------ccccccccccccccccccchhHHHHHHHHHHHHHHHHHhcC-cCcEEEEEEee
Confidence            9999999999999999987        89999999999999999999999999999999999999999 99999999999


Q ss_pred             CcccCCCCCCCCC----hHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          160 GPIKDTAGVSKLA----PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       160 g~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      |+++|++......    ..+..+.+....|++|+++|+|+|++++||+++.++++||+.|.+|||++..
T Consensus       187 G~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~s~~  255 (258)
T d1ae1a_         187 GVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYITGQIIWADGGFTAN  255 (258)
T ss_dssp             CSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             CcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCCCcCcEEEeCCCeecc
Confidence            9999998655432    3466777888899999999999999999999999999999999999998764

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-42  Score=288.47  Aligned_cols=216  Identities=32%  Similarity=0.517  Sum_probs=195.1

Q ss_pred             CCCcHHHHHHHHHHHHhc-----CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSL-----GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV   75 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~-----~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~   75 (257)
                      ++|+.+++++++++|.+.     +.++..+.||++|+++++++++++.+++|+||++|||||+....++.+.+.++|++.
T Consensus        42 ~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~  121 (297)
T d1yxma1          42 ASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAV  121 (297)
T ss_dssp             EESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhh
Confidence            468999999999999753     568999999999999999999999999999999999999988899999999999999


Q ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEE
Q 025124           76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN  155 (257)
Q Consensus        76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~  155 (257)
                      +++|+.++++++++++|.|.+++        .|+||++|+ ++..+.++...|+++|+|+.+|+|+++.|++ ++|||||
T Consensus       122 ~~vNl~g~~~~~~~~~~~m~~~~--------~g~Ii~~ss-~~~~~~~~~~~Y~asKaal~~ltk~lA~el~-~~gIrVN  191 (297)
T d1yxma1         122 LETNLTGTFYMCKAVYSSWMKEH--------GGSIVNIIV-PTKAGFPLAVHSGAARAGVYNLTKSLALEWA-CSGIRIN  191 (297)
T ss_dssp             HHHHTHHHHHHHHHHHHHTHHHH--------CEEEEEECC-CCTTCCTTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEE
T ss_pred             hcccccchhhHHHHHHHhhcccc--------ccccccccc-cccccccccccchhHHHHHHHHHHHHHHHhc-ccCceEE
Confidence            99999999999999999999887        788998866 4556788899999999999999999999999 9999999


Q ss_pred             EEecCcccCCCCCCCCC--hHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCC
Q 025124          156 GIAPGPIKDTAGVSKLA--PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNP  226 (257)
Q Consensus       156 ~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~  226 (257)
                      +|+||++.|++......  .++..+......|++|+++|+|+|.+++||+++.++|+||++|.+|||+++...
T Consensus       192 ~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pedvA~~v~fL~Sd~s~~iTG~~i~VDGG~sl~~~  264 (297)
T d1yxma1         192 CVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSLYTH  264 (297)
T ss_dssp             EEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCBT
T ss_pred             EeeeCcCcCcchhhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCcCCcEEEeCcChhhhcC
Confidence            99999999998755443  244556666778999999999999999999999999999999999999987543

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.9e-42  Score=279.60  Aligned_cols=192  Identities=25%  Similarity=0.335  Sum_probs=169.6

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      ++..+++|++|+++++++++++.+++|+||++|||||+....++.+.+.++|++++++|+.+++.++|+++|+|++++  
T Consensus        46 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~--  123 (237)
T d1uzma1          46 GLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK--  123 (237)
T ss_dssp             TSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--
T ss_pred             CceEEEEecCCHHHHHHHHHHHHHhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccC--
Confidence            346679999999999999999999999999999999998889999999999999999999999999999999999987  


Q ss_pred             CCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHHHHh
Q 025124          101 QASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA  180 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~  180 (257)
                            .|+||++||..+..+.++...|+++|+|+.+|+|+++.|+. ++|||||+|+||+++|++....  .+...+..
T Consensus       124 ------~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~-~~gIrVN~I~PG~v~T~~~~~~--~~~~~~~~  194 (237)
T d1uzma1         124 ------FGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELS-KANVTANVVAPGYIDTDMTRAL--DERIQQGA  194 (237)
T ss_dssp             ------CEEEEEECCCCC-----CCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHHS--CHHHHHHH
T ss_pred             ------CCceEEEcchhhccCCcccHHHHHHHHHHHHHHHHHHhhhh-cCCceeeeeeeCcCCChhhhcc--CHHHHHHH
Confidence                  79999999999999999999999999999999999999999 9999999999999999875432  35556677


Q ss_pred             hhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          181 TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       181 ~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ....|++|+.+|||+|++++||++++++++||+++.+|||+.+
T Consensus       195 ~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~vdGG~~m  237 (237)
T d1uzma1         195 LQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGMGM  237 (237)
T ss_dssp             GGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCeEEECCCCCC
Confidence            7888999999999999999999999999999999999999764

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=2.1e-42  Score=282.14  Aligned_cols=210  Identities=27%  Similarity=0.308  Sum_probs=186.9

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|++++++++.+++   +.+..++++|++|+++++++++++.+++|++|++|||||+....++.+.+.++|++.+++|+
T Consensus        36 ~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl  112 (253)
T d1hxha_          36 SDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINT  112 (253)
T ss_dssp             ECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHT
T ss_pred             EECCHHHHHHHHHHh---CCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhh
Confidence            478999999888776   56789999999999999999999999999999999999998889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCC--CCeEEEEEe
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTD--YAIRVNGIA  158 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~--~gi~v~~v~  158 (257)
                      .++++++++++|+|+++         +|+||++||..+..+.++...|+++|+|+.+|+|+++.|++ +  +|||||+|+
T Consensus       113 ~~~~~~~~~~~~~m~~~---------~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~-~~g~~IrVN~I~  182 (253)
T d1hxha_         113 ESVFIGCQQGIAAMKET---------GGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCR-KQGYAIRVNSIH  182 (253)
T ss_dssp             HHHHHHHHHHHHHHTTT---------CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHH-HHTCCEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHhc---------CCceecccchhhhcCccccccccchhHHHHHHHHHHHHHHh-hcCCCEEEEEEe
Confidence            99999999999999764         69999999999999999999999999999999999999997 5  569999999


Q ss_pred             cCcccCCCCCCCC---ChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          159 PGPIKDTAGVSKL---APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       159 Pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ||+++|++.....   ..++.........+++++.+|+|+|++++||+++.++|+||+.+.+|||+.-
T Consensus       183 PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~~  250 (253)
T d1hxha_         183 PDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMSGSELHADNSILG  250 (253)
T ss_dssp             ESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSSCTT
T ss_pred             ECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHHHHHhChhhCCCcCcEEEECccHhh
Confidence            9999998753322   1233333444455678899999999999999999999999999999999753

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=5.5e-42  Score=281.64  Aligned_cols=213  Identities=28%  Similarity=0.368  Sum_probs=178.0

Q ss_pred             CCCcHHHHHHHHHHHHhcC---CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCCCCHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAEDLSPNGFR   73 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~---~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~----~~~~~~~~~~~~   73 (257)
                      ++|++++++++.+++.+.+   .++.++++|++++++++++++++.+++|+||++|||||....    ..+.+.+.++|+
T Consensus        35 ~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~  114 (264)
T d1spxa_          35 TGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYD  114 (264)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHH
T ss_pred             EECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEeecccccccCCccccccccCCHHHHH
Confidence            4799999999999999875   358999999999999999999999999999999999997543    456777999999


Q ss_pred             HHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccc-ccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCe
Q 025124           74 TVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT-LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAI  152 (257)
Q Consensus        74 ~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~-~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi  152 (257)
                      +.+++|+.+++.++++++|+|+++.         |.+|+++|. ++..+.++...|+++|+|+.+|+|+|+.|++ ++||
T Consensus       115 ~~~~vNl~~~~~~~~~~~p~m~~~~---------g~iI~~~S~~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~-~~gI  184 (264)
T d1spxa_         115 ATLNLNLRSVIALTKKAVPHLSSTK---------GEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLI-QHGI  184 (264)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHHHHT---------CEEEEECCTTSSSSCCTTSHHHHHHHHHHHHHHHHHHHHHG-GGTC
T ss_pred             HHHHHhHHHHHHHHhhhCCcccccc---------CcceeeeeeccccccCCCchhhhhhhhhHHHHHHHHHHHhc-ccCe
Confidence            9999999999999999999998874         566666665 4678899999999999999999999999999 9999


Q ss_pred             EEEEEecCcccCCCCCCCCCh-------HHHHHHhhhhccCCCCCCHHhHHHHHHHhccC-CCCcccCcEEEecCCccc
Q 025124          153 RVNGIAPGPIKDTAGVSKLAP-------EEIRSKATDYMAAYKFGEKWDIAMAALYLASD-AGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       153 ~v~~v~Pg~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~-~~~~~~G~~~~~dgg~~~  223 (257)
                      |||+|+||+++|++.......       ........+..|++|+++|+|+|++++||+|+ .++|+||+.+.+|||+++
T Consensus       185 rVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~sl  263 (264)
T d1spxa_         185 RVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSL  263 (264)
T ss_dssp             EEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             EEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCCccCceEEeCCChhh
Confidence            999999999999986543322       22344566778999999999999999999985 489999999999999876

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=3.6e-42  Score=280.83  Aligned_cols=210  Identities=17%  Similarity=0.242  Sum_probs=186.8

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n   79 (257)
                      ++|+.++++++.+....      ++.+|+++.++++++++++.++||+||++|||||+.. ..++.+.+.++|++.+++|
T Consensus        30 ~~r~~~~~~~~~~~~~~------~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vn  103 (252)
T d1zmta1          30 HDESFKQKDELEAFAET------YPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEAL  103 (252)
T ss_dssp             CCGGGGSHHHHHHHHHH------CTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHH
T ss_pred             EECCHHHHHHHHhhhCc------EEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHH
Confidence            36777777766544332      2468999999999999999999999999999999754 4789999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.++++++|+++|+|++++        .|+||++||..+..+.++...|+++|+|+.+|+|+++.|++ ++|||||+|+|
T Consensus       104 l~~~~~~~~~~~~~m~~~~--------~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~ela-~~gIrVN~I~P  174 (252)
T d1zmta1         104 QIRPFALVNAVASQMKKRK--------SGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELG-EYNIPVFAIGP  174 (252)
T ss_dssp             THHHHHHHHHHHHHHHHHT--------CCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCCEEEEEE
T ss_pred             hHHHHHHHHHHHHhhcccc--------cceeecccccccccccccccccccccccHHHHHHHHHHHhc-ccCcEEEEEec
Confidence            9999999999999999987        79999999999999999999999999999999999999999 99999999999


Q ss_pred             CcccCCCCCCCCC------hHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCC
Q 025124          160 GPIKDTAGVSKLA------PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSN  225 (257)
Q Consensus       160 g~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~  225 (257)
                      |+++|++......      .++..+......|++|+++|+|+|++++||+|+.++|+||+++.+|||+++..
T Consensus       175 G~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~iTG~~i~vdGG~~~~~  246 (252)
T d1zmta1         175 NYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQVFWLAGGFPMIE  246 (252)
T ss_dssp             SSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTTCCCCC
T ss_pred             CCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCeEEECCCceeCC
Confidence            9999988654432      24456677788899999999999999999999999999999999999998753

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=6.4e-42  Score=282.34  Aligned_cols=214  Identities=24%  Similarity=0.345  Sum_probs=184.9

Q ss_pred             CCCcHHHHHHHHHHHHhcC---CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCC----CCCCHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA----EDLSPNGFR   73 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~---~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~----~~~~~~~~~   73 (257)
                      ++|++++++++.+++.+.+   .++.+++||++|+++++.+++++.+++|+||++|||||.....++    .+.+.++|+
T Consensus        35 ~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~  114 (272)
T d1xkqa_          35 TGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYH  114 (272)
T ss_dssp             EESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHH
T ss_pred             EECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHhCCceEEEeCCcccCcccccccchhccHHHHH
Confidence            4799999999999998874   368999999999999999999999999999999999998766554    456777899


Q ss_pred             HHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEc-ccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCe
Q 025124           74 TVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS-ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAI  152 (257)
Q Consensus        74 ~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~is-s~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi  152 (257)
                      +++++|+.+++.++++++|+|+++.         |.+|+++ |.++..+.++...|+++|+|+.+|+|+|+.|++ ++||
T Consensus       115 ~~~~vNl~~~~~~~~~~~p~m~~~~---------g~iI~~~Ss~a~~~~~~~~~~Y~asKaal~~ltk~lA~el~-~~gI  184 (272)
T d1xkqa_         115 KTLKLNLQAVIEMTKKVKPHLVASK---------GEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLA-KFGI  184 (272)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHHHHT---------CEEEEECCGGGSSSCCCSSHHHHHHHHHHHHHHHHHHHHHH-TTTC
T ss_pred             HHHHhhhhHHHHHHHhhcccccccC---------CccccccchhccccCCCCcchhhhHHHHHHHHHHHHHHHhc-ccCe
Confidence            9999999999999999999999864         4555555 467788999999999999999999999999999 9999


Q ss_pred             EEEEEecCcccCCCCCCCCChHH-------HHHHhhhhccCCCCCCHHhHHHHHHHhccCC-CCcccCcEEEecCCcccC
Q 025124          153 RVNGIAPGPIKDTAGVSKLAPEE-------IRSKATDYMAAYKFGEKWDIAMAALYLASDA-GKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       153 ~v~~v~Pg~v~t~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~-~~~~~G~~~~~dgg~~~~  224 (257)
                      |||+|+||+++|++.......+.       .........|++|+++|+|+|++++||++++ +.|+||+++.+|||+++.
T Consensus       185 rVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~l~  264 (272)
T d1xkqa_         185 RVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSLV  264 (272)
T ss_dssp             EEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             EEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHHHh
Confidence            99999999999998654433222       2233455678999999999999999999965 578999999999999875

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.8e-42  Score=277.35  Aligned_cols=207  Identities=26%  Similarity=0.338  Sum_probs=187.1

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|++++++++.+++    ..+..+.+|++|++++++++    +++|+||++|||||.....++.+.+.++|++.+++|+
T Consensus        37 ~~r~~~~l~~~~~~~----~~~~~~~~Dv~d~~~v~~~~----~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl  108 (244)
T d1pr9a_          37 VSRTQADLDSLVREC----PGIEPVCVDLGDWEATERAL----GSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNL  108 (244)
T ss_dssp             EESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHH----TTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHT
T ss_pred             EECCHHHHHHHHHhc----CCCeEEEEeCCCHHHHHHHH----HHhCCceEEEeccccccccchhhhhHHHHHHHHHHhh
Confidence            478999988887665    35788999999999987665    4679999999999998889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .++++++++++|.|.++..       .|+||+++|..+..+.++...|+++|+|+.+|+|+++.|++ ++|||||+|+||
T Consensus       109 ~~~~~~~~~~~~~~~~~~~-------~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~-~~gIrvN~I~PG  180 (244)
T d1pr9a_         109 RAVIQVSQIVARGLIARGV-------PGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELG-PHKIRVNAVNPT  180 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             hhhhHHHHHhhhHHHHhCC-------cceEeecccccccccccchhhhhhhHHHHHHHHHHHHHHhC-CCcEEEEEEeeC
Confidence            9999999999998765432       79999999999999999999999999999999999999999 999999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      +++|++........+..+.+....|++|+++|+|+|+.++||+++.++++||+++.+|||++-
T Consensus       181 ~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG~~A  243 (244)
T d1pr9a_         181 VVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGGFWA  243 (244)
T ss_dssp             CBCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cCcChHHhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCcCCcEEEECccHhh
Confidence            999998776666666777788889999999999999999999999999999999999999863

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.4e-42  Score=277.88  Aligned_cols=206  Identities=23%  Similarity=0.304  Sum_probs=185.6

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|++++++++.+++    ..+..+.||++|++++++++    +++|+||+||||||+....++.+.+.++|++.+++|+
T Consensus        35 ~~r~~~~l~~~~~~~----~~~~~~~~Dv~~~~~v~~~~----~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl  106 (242)
T d1cyda_          35 VTRTNSDLVSLAKEC----PGIEPVCVDLGDWDATEKAL----GGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNL  106 (242)
T ss_dssp             EESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHH----TTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHT
T ss_pred             EECCHHHHHHHHHhc----CCCeEEEEeCCCHHHHHHHH----HHcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHh
Confidence            368888888877665    35788999999999887665    4679999999999998889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .+++.++|+++|.|.+++.       +|+||+++|..+..+.++...|+++|+|+.+|+|+++.|++ ++|||||+|+||
T Consensus       107 ~~~~~~~~~~~~~~~~~~~-------~g~ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~-~~gIrvN~I~PG  178 (242)
T d1cyda_         107 RSVFQVSQMVARDMINRGV-------PGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELG-PHKIRVNSVNPT  178 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred             ccchHHHHHhchhhhhhcc-------cCcccccchhhccccCCccccccchHHHHHHHHHHHHHHhC-ccCeecccCCCC
Confidence            9999999999998776532       68999999999999999999999999999999999999999 999999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      +++|++.......++..+......|++|+++|+|+|++++||+++.++|+||+++.+|||++
T Consensus       179 ~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeva~~v~fL~S~~s~~itG~~i~vDGG~~  240 (242)
T d1cyda_         179 VVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGGILVDAGYL  240 (242)
T ss_dssp             CBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSSEEEESTTGG
T ss_pred             CccCHHHHhhcCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCcCCceEEeCcchh
Confidence            99999866555556777788888999999999999999999999999999999999999965

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.3e-41  Score=280.63  Aligned_cols=216  Identities=24%  Similarity=0.319  Sum_probs=189.7

Q ss_pred             CCCcHHHHHHHHHHHHhcCC---CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC--CCCCCCCHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGI---PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL--VPAEDLSPNGFRTV   75 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~---~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~   75 (257)
                      ++|++++++++++++.+.+.   ++.++.||++|+++++++++++.+++|+||++|||||....  ..+.+.+.++|++.
T Consensus        34 ~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~  113 (274)
T d1xhla_          34 TGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKT  113 (274)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHcCCceEEEeecccccccccccccCCHHHHHHH
Confidence            36899999999999998753   68899999999999999999999999999999999996544  34566788999999


Q ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEE
Q 025124           76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN  155 (257)
Q Consensus        76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~  155 (257)
                      +++|+.++++++|+++|+|++++        .|+|+++||.++..+.+++..|+++|+|+.+|+|+++.|++ ++|||||
T Consensus       114 ~~vNl~~~~~~~~~~~~~m~~~~--------~g~ii~~ss~~~~~~~~~~~~Y~asKaal~~ltk~lA~ela-~~gIrVN  184 (274)
T d1xhla_         114 FKLNFQAVIEMTQKTKEHLIKTK--------GEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLI-QHGVRVN  184 (274)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHTT--------CEEEEECCGGGSSSCCTTSHHHHHHHHHHHHHHHHHHHHHG-GGTCEEE
T ss_pred             Hhhcccccccccccccccccccc--------cccccchhhhhccccCCCCceehhhhhHHHHHHHHHHHHHh-HhCCcee
Confidence            99999999999999999999876        78899999999999999999999999999999999999999 9999999


Q ss_pred             EEecCcccCCCCCCCCChHH-------HHHHhhhhccCCCCCCHHhHHHHHHHhccC-CCCcccCcEEEecCCcccCC
Q 025124          156 GIAPGPIKDTAGVSKLAPEE-------IRSKATDYMAAYKFGEKWDIAMAALYLASD-AGKYVNGNTLIVDGGNWLSN  225 (257)
Q Consensus       156 ~v~Pg~v~t~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~dva~~~~~l~~~-~~~~~~G~~~~~dgg~~~~~  225 (257)
                      +|+||+++|++.......+.       .........|++|+++|+|+|++++||+++ .++|+||+++.+|||+++..
T Consensus       185 ~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~~l~~  262 (274)
T d1xhla_         185 SVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVM  262 (274)
T ss_dssp             EEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCC
T ss_pred             eeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCCccccCccCcEEEeCcCHHHhc
Confidence            99999999987544332211       222334557899999999999999999995 68999999999999998763

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=1.3e-41  Score=278.90  Aligned_cols=214  Identities=21%  Similarity=0.373  Sum_probs=191.0

Q ss_pred             CCCcHHHHHHHHHHHHhc-CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      ++|+.++++++.+++.+. +.++.++.||++|+++++++++++.+++|+||++|||||+....++.+.+.++|++.+++|
T Consensus        39 ~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N  118 (260)
T d1h5qa_          39 IYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVN  118 (260)
T ss_dssp             EESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCCCcEecccccccccCCHHHhcccccccccccc
Confidence            368888888888888654 7889999999999999999999999999999999999999888999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccc-------ccccchhhHHHHHHHHHHHHHHHHHhcCCCCe
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAI  152 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~-------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi  152 (257)
                      +.++++++++++|+|.++..       .+.|++++|.....       +.++...|+++|+|+.+|+|+++.|++ ++||
T Consensus       119 ~~g~~~~~~~~~~~m~~~~~-------~g~i~~~~s~~~~~~~~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~-~~gI  190 (260)
T d1h5qa_         119 VFGVFNTCRAVAKLWLQKQQ-------KGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWA-SAGI  190 (260)
T ss_dssp             THHHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGTSCCEEETTEECSCHHHHHHHHHHHHHHHHHHHHHG-GGTE
T ss_pred             ccchhhhhhhhccccccccc-------ceEEEEeeccccccccccccccCccccchhhhhhhHHHHHHHHHHHhc-hhCe
Confidence            99999999999999976542       67788888766543       335678999999999999999999999 9999


Q ss_pred             EEEEEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          153 RVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       153 ~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      |||+|+||+++|++....  .++..+......|++|+++|+|+|+.++||+++.++++||+.+.+|||++++
T Consensus       191 rvN~I~PG~i~T~~~~~~--~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~~~  260 (260)
T d1h5qa_         191 RVNALSPGYVNTDQTAHM--DKKIRDHQASNIPLNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQLIW  260 (260)
T ss_dssp             EEEEEEECSBCCGGGGGS--CHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTGGGC
T ss_pred             EEeecCCCcccCcchhcc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcchhCCCcCceEEECCCeecC
Confidence            999999999999876443  3566677888899999999999999999999999999999999999998763

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=5.8e-41  Score=271.47  Aligned_cols=200  Identities=17%  Similarity=0.185  Sum_probs=182.1

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|++++++++.+++.+.|.++.++.||++|+++++++++++.+++|+||++|||||.....++.+.+.++|++++++|+
T Consensus        38 ~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl  117 (240)
T d2bd0a1          38 SSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNL  117 (240)
T ss_dssp             EESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred             EeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEee
Confidence            36899999999999999898999999999999999999999999999999999999998889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      .|+++++++++|+|++++        +|+||++||.++..+.++++.|+++|+|+.+|+++|+.|++ ++|||||+|+||
T Consensus       118 ~g~~~~~~~~~~~m~~~~--------~G~Ii~isS~~~~~~~~~~~~Y~asK~al~~lt~~la~el~-~~gIrvn~i~PG  188 (240)
T d2bd0a1         118 KGTFFLTQALFALMERQH--------SGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYAR-KCNVRITDVQPG  188 (240)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHT-TTTEEEEEEEEC
T ss_pred             hHHHHHHHHHhHHHHhcC--------CCceEEEechhhcCCCCCChHHHHHHHHHHHHHHHHHHHhC-cCCeEEEEeeeC
Confidence            999999999999999987        79999999999999999999999999999999999999999 999999999999


Q ss_pred             cccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCc-EEEecCC
Q 025124          161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGN-TLIVDGG  220 (257)
Q Consensus       161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~-~~~~dgg  220 (257)
                      +++|+|.......           ...++.+|+|+|+.++||+++++++++|+ .+..++|
T Consensus       189 ~v~T~~~~~~~~~-----------~~~~~~~PedvA~~v~~l~s~~~~~~~~~~~i~p~~G  238 (240)
T d2bd0a1         189 AVYTPMWGKVDDE-----------MQALMMMPEDIAAPVVQAYLQPSRTVVEEIILRPTSG  238 (240)
T ss_dssp             CBCSTTTCCCCST-----------TGGGSBCHHHHHHHHHHHHTSCTTEEEEEEEEEETTC
T ss_pred             cccCchhhhcCHh-----------hHhcCCCHHHHHHHHHHHHcCCccCccCCEEEEecCC
Confidence            9999975432111           11356799999999999999988887776 4556666

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=2.6e-40  Score=270.94  Aligned_cols=209  Identities=24%  Similarity=0.421  Sum_probs=189.5

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      .|+++.++++.+++.+.|.+++.++||++|+++++.+++++.+++|+||++|||||.....++.+.+.++|++.+++|+.
T Consensus        38 ~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~  117 (259)
T d1ja9a_          38 GSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTR  117 (259)
T ss_dssp             SSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTH
T ss_pred             CCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccc
Confidence            46778899999999999999999999999999999999999999999999999999988899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccc-ccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecC
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH-YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG  160 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~-~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg  160 (257)
                      ++++++++++|+|++          +|.+++++|..+ ..+.+++..|+++|+|+.+|+|+|+.|++ ++|||||+|+||
T Consensus       118 ~~~~~~~~~~~~m~~----------~g~~iii~s~~~~~~~~~~~~~Y~asK~al~~l~r~lA~e~~-~~gIrvN~I~PG  186 (259)
T d1ja9a_         118 GQFFVAQQGLKHCRR----------GGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCG-AKGVTVNCIAPG  186 (259)
T ss_dssp             HHHHHHHHHHHHEEE----------EEEEEEECCGGGTCCSCCSCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEEC
T ss_pred             eeeeehhhhhhhhhc----------CCcccccccccccccCCCCchhHHHHHHHHHHHHHHHHHHHh-hcCeEEeccCcC
Confidence            999999999999976          466777766655 44688999999999999999999999999 999999999999


Q ss_pred             cccCCCCC-----------CCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          161 PIKDTAGV-----------SKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       161 ~v~t~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                      +++|++..           .....++..+.+....|++|+++|+|||++++||+++.++++||+.+.+|||.
T Consensus       187 ~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         187 GVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             CBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCCcCceEEeCCCC
Confidence            99998632           11234566777888899999999999999999999999999999999999995

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=3.4e-40  Score=267.20  Aligned_cols=205  Identities=25%  Similarity=0.382  Sum_probs=177.9

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.++++++.   ++.+.++.+++||++++++++++++++.+++|++|++|||||.....++.+.+.++|+..+++|+.
T Consensus        36 ~r~~~~~~~~~---~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~  112 (241)
T d2a4ka1          36 DREERLLAEAV---AALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLT  112 (241)
T ss_dssp             ESCHHHHHHHH---HTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHH
T ss_pred             ECCHHHHHHHH---HHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEeccccccccccchhhhhccccccccccccc
Confidence            67887766544   455778999999999999999999999999999999999999888899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      +++.++|++.|+|.+          .+.++++|+. +..+.+++..|+++|+|+++|+++|++|++ ++|||||+|+||+
T Consensus       113 ~~~~~~k~~~~~~~~----------~~~i~~~ss~-a~~~~~~~~~Y~~sK~al~~lt~~lA~el~-~~gIrvN~I~PG~  180 (241)
T d2a4ka1         113 GSFLVARKAGEVLEE----------GGSLVLTGSV-AGLGAFGLAHYAAGKLGVVGLARTLALELA-RKGVRVNVLLPGL  180 (241)
T ss_dssp             HHHHHHHHHHHHCCT----------TCEEEEECCC-TTCCHHHHHHHHHCSSHHHHHHHHHHHHHT-TTTCEEEEEEECS
T ss_pred             ccccccccccccccc----------ccceeecccc-ccccccCccccchhhHHHHHHHHHHHHHHh-HhCCEEeeeccCc
Confidence            999999999998876          3455555554 455667889999999999999999999999 9999999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ++|++...  ..++..+.+.+..|++++.+|+|+|++++||+++.++++||+++.+|||+++
T Consensus       181 v~T~~~~~--~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~S~~s~~itG~~i~vDGG~s~  240 (241)
T d2a4ka1         181 IQTPMTAG--LPPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALYVDGGRSI  240 (241)
T ss_dssp             BCCGGGTT--SCHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             CCCHHHHh--hhHhHHHHHHhCCCCCCCcCHHHHHHHHHHHhcchhCCCcCceEEeCCCccc
Confidence            99987643  2356677778889999999999999999999999999999999999999876

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.1e-40  Score=271.16  Aligned_cols=211  Identities=21%  Similarity=0.220  Sum_probs=180.6

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIE   77 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~   77 (257)
                      +|+++.. +..+++...+.+...+++|++|+++++++++++.+++|+||++|||||....    ..+.+.+.++|+..++
T Consensus        41 ~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~  119 (256)
T d1ulua_          41 YQAERLR-PEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALE  119 (256)
T ss_dssp             ESSGGGH-HHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHH
T ss_pred             eCcHHHH-HHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhh
Confidence            3554433 3344555556678899999999999999999999999999999999997542    4677889999999999


Q ss_pred             HHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEE
Q 025124           78 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (257)
Q Consensus        78 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v  157 (257)
                      +|+.+++.++++++|.|++          +|+||++||..+..+.+++..|+++|+|+.+|+|+++.|++ ++|||||+|
T Consensus       120 vn~~~~~~~~~~~~~~~~~----------~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltr~lA~ela-~~gIrVN~I  188 (256)
T d1ulua_         120 VSAYSLVAVARRAEPLLRE----------GGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELG-PKGVRVNAI  188 (256)
T ss_dssp             HHTHHHHHHHHHHTTTEEE----------EEEEEEEECGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEE
T ss_pred             hhHHHHHHHHHHHHHHhcc----------CCEEEEEeehHhcCCCCCchHHHHHHHHHHHHHHHHHHHhc-ccCCEEeee
Confidence            9999999999999998865          68999999999999999999999999999999999999999 999999999


Q ss_pred             ecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          158 APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       158 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      +||++.|++.......++..+......|++|+.+|+|+|++++||+++.++++||+.+.+|||+++.
T Consensus       189 ~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~~~  255 (256)
T d1ulua_         189 SAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYHIM  255 (256)
T ss_dssp             EECCC----------CHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             ccceeeeccccchhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCccCCeEEECcCEeCc
Confidence            9999999887666556777788888899999999999999999999999999999999999999875

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=8.1e-40  Score=270.16  Aligned_cols=211  Identities=22%  Similarity=0.266  Sum_probs=182.4

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCC-----CCCCCCHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV-----PAEDLSPNGFRTV   75 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~-----~~~~~~~~~~~~~   75 (257)
                      ++|++++++++.+++   +.++..+.+|++++++++++++++.+++|++|++|||||+....     ...+.+.++|+++
T Consensus        35 ~~r~~~~l~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~  111 (276)
T d1bdba_          35 LDKSAERLAELETDH---GDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEV  111 (276)
T ss_dssp             EESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHH
T ss_pred             EECCHHHHHHHHHHc---CCCeeEEecccccHHHHHHHHHHHHHHhCCcccccccccccCCCCccccccccchhhhhhHH
Confidence            368888888877665   46799999999999999999999999999999999999975443     2345556789999


Q ss_pred             HHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEE
Q 025124           76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN  155 (257)
Q Consensus        76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~  155 (257)
                      +++|+.++++++|+++|+|+++         +|+||+++|..+..+.++.+.|+++|+|+.+|+|+++.|++ ++ ||||
T Consensus       112 ~~vNl~g~~~~~~~~~p~m~~~---------~g~iI~i~S~~~~~~~~~~~~Y~asKaal~~ltr~lA~ela-~~-IrVN  180 (276)
T d1bdba_         112 FHINVKGYIHAVKACLPALVAS---------RGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELA-PY-VRVN  180 (276)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHH---------TCEEEEECCGGGTSTTSSCHHHHHHHHHHHHHHHHHHHHHT-TT-CEEE
T ss_pred             HHHhhHHHHHHHHHHHHHHHhc---------CCCceeeeechhccCCCCCchHHHHHHHHHHHHHHHHHHhh-cc-eEEc
Confidence            9999999999999999999876         58899999999999999999999999999999999999998 75 9999


Q ss_pred             EEecCcccCCCCCCCC--------ChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccC-CCCcccCcEEEecCCcccCC
Q 025124          156 GIAPGPIKDTAGVSKL--------APEEIRSKATDYMAAYKFGEKWDIAMAALYLASD-AGKYVNGNTLIVDGGNWLSN  225 (257)
Q Consensus       156 ~v~Pg~v~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~-~~~~~~G~~~~~dgg~~~~~  225 (257)
                      +|+||+++|++.....        ...+..+.+....|++|+++|+|+|++++||+++ .++|+||+.+.+|||+++..
T Consensus       181 ~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeva~~v~fL~S~~~a~~itG~~i~VDGG~~~~g  259 (276)
T d1bdba_         181 GVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFATRGDAAPATGALLNYDGGLGVRG  259 (276)
T ss_dssp             EEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESSSGGGCC
T ss_pred             ccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCcccCCeeCcEEEECcChhhcc
Confidence            9999999998753321        1233456677788999999999999999999984 68999999999999988753

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=3.1e-39  Score=260.59  Aligned_cols=188  Identities=23%  Similarity=0.302  Sum_probs=169.9

Q ss_pred             eEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCC
Q 025124           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ  101 (257)
Q Consensus        22 ~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  101 (257)
                      ..++.||+++.      ++.+.+++|+||++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++   
T Consensus        46 ~~~~~~Dv~~~------~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~---  116 (234)
T d1o5ia_          46 HRYVVCDLRKD------LDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG---  116 (234)
T ss_dssp             SEEEECCTTTC------HHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---
T ss_pred             CcEEEcchHHH------HHHHHHHhCCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccc---
Confidence            35678999864      456677889999999999998888999999999999999999999999999999999887   


Q ss_pred             CCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHHHHhh
Q 025124          102 ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT  181 (257)
Q Consensus       102 ~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~  181 (257)
                           .|+||+++|..+..+.++...|+++|+|+.+|+|+++.|++ ++|||||+|+||+++|++..... .++..+...
T Consensus       117 -----~G~ii~i~S~~~~~~~~~~~~Y~asKaal~~ltk~lA~ela-~~gIrVN~I~PG~v~T~~~~~~~-~~~~~~~~~  189 (234)
T d1o5ia_         117 -----WGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVA-PYGITVNCVAPGWTETERVKELL-SEEKKKQVE  189 (234)
T ss_dssp             -----CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCTTHHHHS-CHHHHHHHH
T ss_pred             -----cccccccccccccccccccccchhHHHHHHHHHHHHHHHhc-ccCeEEeecccCccchhhhhhhc-CHHHHHHHH
Confidence                 79999999999999999999999999999999999999999 99999999999999998764433 345566677


Q ss_pred             hhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCC
Q 025124          182 DYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSN  225 (257)
Q Consensus       182 ~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~  225 (257)
                      ...|++|+.+|+|+|++++||+++.++++||+++.+|||++..+
T Consensus       190 ~~~pl~R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~s~~p  233 (234)
T d1o5ia_         190 SQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGGLSKFP  233 (234)
T ss_dssp             TTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCCCCC
T ss_pred             hcCCCCCCcCHHHHHHHHHHHhChhhcCCcCcEEEECcccccCC
Confidence            88999999999999999999999999999999999999987653

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-39  Score=264.01  Aligned_cols=208  Identities=26%  Similarity=0.312  Sum_probs=180.9

Q ss_pred             CCCcHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI   78 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~   78 (257)
                      ++|+.++++++.+++.+.  +.++.++.||++|+++++++++++.+++|+||+||||||...        .++|++.+++
T Consensus        33 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAg~~~--------~~~~~~~~~~  104 (254)
T d2gdza1          33 VDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNN--------EKNWEKTLQI  104 (254)
T ss_dssp             EESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCC--------SSSHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcCCcCeecccccccc--------cccchheeee
Confidence            379999999999999765  467999999999999999999999999999999999999753        3458999999


Q ss_pred             HhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHH--HHHHhcCCCCeEEEE
Q 025124           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS--LALEWGTDYAIRVNG  156 (257)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~--la~e~~~~~gi~v~~  156 (257)
                      |+.+++.++++++|+|.++..+.     .|+||++||..+..+.++.+.|+++|+|+.+|+|+  |+.|+. ++|||||+
T Consensus       105 n~~~~~~~~~~~~~~m~~~~~~~-----~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltrs~ala~e~~-~~gIrVN~  178 (254)
T d2gdza1         105 NLVSVISGTYLGLDYMSKQNGGE-----GGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLM-NSGVRLNA  178 (254)
T ss_dssp             HTHHHHHHHHHHHHHHCGGGTCC-----CEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEE
T ss_pred             ehhhHHHHHHHHHHHHHHhhcCC-----CcEEEeeccHhhccCCCCccchHHHHHHHHHHHHHHHHHHHhc-CCCEEEEE
Confidence            99999999999999998865322     58999999999999999999999999999999997  788999 99999999


Q ss_pred             EecCcccCCCCCCCCChH------HHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          157 IAPGPIKDTAGVSKLAPE------EIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       157 v~Pg~v~t~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      |+||+++|+|........      +..+......|++++.+|+|+|++++||++++  ++||+++.+|||..+.
T Consensus       179 I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~--~itG~~i~VdGG~~~~  250 (254)
T d2gdza1         179 ICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDD--ALNGAIMKITTSKGIH  250 (254)
T ss_dssp             EEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHHCT--TCSSCEEEEETTTEEE
T ss_pred             EEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHcCC--CCCCCEEEECCCCeee
Confidence            999999998764433221      22345556678889999999999999999864  4999999999998764

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=1.2e-38  Score=262.87  Aligned_cols=210  Identities=30%  Similarity=0.432  Sum_probs=185.8

Q ss_pred             CcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHH
Q 025124            3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG   82 (257)
Q Consensus         3 r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~   82 (257)
                      |+.+.++++.+++++.+.++.++.+|++|+++++++++++.+.+|+||++|||+|.....++.+.+.++|++.+++|+.+
T Consensus        51 ~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~  130 (272)
T d1g0oa_          51 NSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRG  130 (272)
T ss_dssp             SCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHH
T ss_pred             CchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccce
Confidence            44678899999999999999999999999999999999999999999999999999888999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccc-cccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~-~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      ++.++++++|+|.+          +|++++++|..+. .+.++++.|+++|+|+++|+|+++.|++ ++|||||+|+||+
T Consensus       131 ~~~~~~~~~~~m~~----------~g~~i~i~s~~~~~~~~~~~~~Y~asKaal~~ltk~lA~e~~-~~gIrVN~I~PG~  199 (272)
T d1g0oa_         131 QFFVAREAYKHLEI----------GGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMA-DKKITVNVVAPGG  199 (272)
T ss_dssp             HHHHHHHHHHHSCT----------TCEEEEECCGGGTCSSCSSCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECC
T ss_pred             eeeecccccccccc----------ccccccccccccccccccchhhHHHHHHHHHHHHHHHHHHhc-hhCeEEEEEccCC
Confidence            99999999999976          5778888877654 4567788999999999999999999999 9999999999999


Q ss_pred             ccCCCCCC----------CCChHH-HHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          162 IKDTAGVS----------KLAPEE-IRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       162 v~t~~~~~----------~~~~~~-~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      ++|++...          ....++ .........|++|+++|+|||.+++||+++.++++||+++.+|||+++
T Consensus       200 v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~fL~s~~s~~itG~~i~vDGG~~m  272 (272)
T d1g0oa_         200 IKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGACM  272 (272)
T ss_dssp             BSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             cCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHHHHHHHHHhCchhcCccCceEeECCCCCC
Confidence            99986421          111222 223355678899999999999999999999999999999999999764

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-38  Score=257.25  Aligned_cols=211  Identities=22%  Similarity=0.218  Sum_probs=181.7

Q ss_pred             CCCcHHHHHHHHHHHHhcC--CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI   78 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~--~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~   78 (257)
                      ++|++++++++++++.+.+  .++++++||++++++++.+++++.+++|+||++|||||.....++.+.+.++|+..+++
T Consensus        40 ~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~  119 (257)
T d1xg5a_          40 CARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNV  119 (257)
T ss_dssp             EESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhh
Confidence            3689999999999999885  47889999999999999999999999999999999999988899999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccc--cccchhhHHHHHHHHHHHHHHHHHh--cCCCCeEE
Q 025124           79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA--TWYQIHVSAAKAAVDSITRSLALEW--GTDYAIRV  154 (257)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~--~~~~~~Y~~sK~a~~~l~~~la~e~--~~~~gi~v  154 (257)
                      |+.++++++++++|.|++++.      .+|+||++||.++...  .+....|+++|+|+.+|+|+|+.|+  . ++||||
T Consensus       120 nl~~~~~~~~~~~~~~~~~~~------~~g~Ii~isS~~~~~~~p~~~~~~Y~~sKaal~~ltr~la~el~~~-~~~I~v  192 (257)
T d1xg5a_         120 NVLALSICTREAYQSMKERNV------DDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREA-QTHIRA  192 (257)
T ss_dssp             HTHHHHHHHHHHHHHHHHTTC------CSCEEEEECCGGGTSCCSCGGGHHHHHHHHHHHHHHHHHHHHHHHT-TCCCEE
T ss_pred             hhhHHHHHHHHHHHHHHHhcc------CCCceEEEechHhcCCCCCcccHHHHHHHHHHHhCHHHHHHHHHhC-CCCEEE
Confidence            999999999999999987541      1589999999998754  4566779999999999999999998  6 789999


Q ss_pred             EEEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCC
Q 025124          155 NGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG  220 (257)
Q Consensus       155 ~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg  220 (257)
                      |+|+||++.|++......  ...+......+.+++++|+|+|++++||+++++++++|+++..++|
T Consensus       193 n~i~PG~i~t~~~~~~~~--~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~a~~itG~i~i~~~g  256 (257)
T d1xg5a_         193 TCISPGVVETQFAFKLHD--KDPEKAAATYEQMKCLKPEDVAEAVIYVLSTPAHIQIGDIQMRPTG  256 (257)
T ss_dssp             EEEEESCBCSSHHHHHTT--TCHHHHHHHHC---CBCHHHHHHHHHHHHHSCTTEEEEEEEEEETT
T ss_pred             EEEeCCCCCChhhhhcCh--hhHHHHHhcCCCCCCcCHHHHHHHHHHHhCChhcCeECCEEEEeCC
Confidence            999999999886432221  1234455667889999999999999999999999999997666555

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=7.5e-37  Score=254.79  Aligned_cols=216  Identities=31%  Similarity=0.505  Sum_probs=191.9

Q ss_pred             CCCcHHHHHHHHHHHHhc-CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      ++|+.++++++++++.+. +.++.++.||+++.++++.+++.+.++++++|++|||||.....++.+.+.++|+..+.+|
T Consensus        55 ~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n  134 (294)
T d1w6ua_          55 ASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIV  134 (294)
T ss_dssp             EESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhccccchhhhhhhhccccccccchhhhhhhheeee
Confidence            368999999999888755 7789999999999999999999999999999999999999888889999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.+.+.+.+...+.+.....       .+.+++++|..+..+.++...|+++|+|+.+|+|+++.|++ ++|||||+|+|
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~-------~~~i~~~ss~~~~~~~~~~~~YsasKaal~~ltk~lA~ela-~~gIrVN~I~P  206 (294)
T d1w6ua_         135 LNGTAFVTLEIGKQLIKAQK-------GAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWG-KYGMRFNVIQP  206 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHTTC-------CEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEE
T ss_pred             cccchhhhhhhhcccccccc-------cccccccccchhhhcccccchHHHHHHHHHHHHHHHHHHHh-HhCeEEEEEcc
Confidence            99999999998888776542       67889999999999999999999999999999999999999 99999999999


Q ss_pred             CcccCCCCCCCCC-hHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          160 GPIKDTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       160 g~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      |+++|++...... .....+......|++|+++|+|+|+++.||+++.++++||++|.+|||.++.
T Consensus       207 G~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~sd~s~~itG~~i~vDGG~~l~  272 (294)
T d1w6ua_         207 GPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVL  272 (294)
T ss_dssp             CCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHH
T ss_pred             CccccchhhhccCCcHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCchhcCCCCcEEEECCChhhe
Confidence            9999998765543 3456677888889999999999999999999999999999999999997654

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2e-37  Score=258.38  Aligned_cols=196  Identities=20%  Similarity=0.246  Sum_probs=173.8

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV   81 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~   81 (257)
                      +|+.+.++++.+++...   ...+.+|+++.++++++++++.+++|+||+||||||+....++.+.+.++|++++++|+.
T Consensus        47 ~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~  123 (302)
T d1gz6a_          47 GKGSSAADKVVEEIRRR---GGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLR  123 (302)
T ss_dssp             BCCSHHHHHHHHHHHHT---TCEEEEECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHhhc---ccccccccchHHHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeeh
Confidence            46778888888888765   345678999999999999999999999999999999998999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124           82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                      |+++++|+++|+|++++        .|+||++||..+..+.++...|+++|+|+.+|+++|+.|+. ++|||||+|+||+
T Consensus       124 g~~~~~~~~~p~m~~~~--------~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt~~la~E~~-~~gIrVN~I~PG~  194 (302)
T d1gz6a_         124 GSFQVTRAAWDHMKKQN--------YGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGR-KNNIHCNTIAPNA  194 (302)
T ss_dssp             HHHHHHHHHHHHHHHHT--------CEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEEEC
T ss_pred             hhHHHHHHhHHHHHhCC--------CcEEEEeCChhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHh-ccCCceeeeCCCC
Confidence            99999999999999987        79999999999999999999999999999999999999999 9999999999999


Q ss_pred             ccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      +.|++ ...+ +++.          .+..+|+|+|.+++||+++.+ ++||+++.+|||+.
T Consensus       195 ~~t~~-~~~~-~~~~----------~~~~~PedvA~~v~fL~S~~a-~itG~~i~vdGG~~  242 (302)
T d1gz6a_         195 GSRMT-ETVM-PEDL----------VEALKPEYVAPLVLWLCHESC-EENGGLFEVGAGWI  242 (302)
T ss_dssp             CSTTT-GGGS-CHHH----------HHHSCGGGTHHHHHHHTSTTC-CCCSCEEEEETTEE
T ss_pred             CCcch-hhcC-cHhh----------HhcCCHHHHHHHHHHHcCCCc-CCCCcEEEeCCCce
Confidence            97543 2222 1221          234689999999999999765 78999999999964

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-37  Score=248.70  Aligned_cols=205  Identities=26%  Similarity=0.301  Sum_probs=177.7

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|++++++++.+     ...+....+|+.+.+.++.    ..+.++++|++|||+|.....++.+.+.++|+..+++|+
T Consensus        36 ~~r~~~~l~~~~~-----~~~~~~~~~d~~~~~~~~~----~~~~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~  106 (245)
T d2ag5a1          36 TDINESKLQELEK-----YPGIQTRVLDVTKKKQIDQ----FANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNV  106 (245)
T ss_dssp             EESCHHHHGGGGG-----STTEEEEECCTTCHHHHHH----HHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHT
T ss_pred             EeCCHHHHHHHHh-----ccCCceeeeeccccccccc----cccccccceeEEecccccCCCChhhCCHHHHHHHHHHhh
Confidence            3678777766432     2457788899987665554    455678999999999998889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccc-cccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~-~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      .+++.+++++.|+|.++.        .|+||+++|..+. .+.+.+..|+++|+|+++|+|+++.|++ ++|||||+|+|
T Consensus       107 ~~~~~~~~~~~~~~~~~~--------~g~Ii~isS~~~~~~~~~~~~~Y~~sKaal~~l~r~lA~e~~-~~gIrvN~I~P  177 (245)
T d2ag5a1         107 RSMYLMIKAFLPKMLAQK--------SGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFI-QQGIRCNCVCP  177 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHT--------CEEEEEECCSBTTTBCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEE
T ss_pred             ccchhHHHhhCcccccCC--------CceeeeeechhhccCCccchhHHHHHHHHHHHHHHHHHHHhh-hhCcEEEEEee
Confidence            999999999999999987        7999999998775 5778899999999999999999999999 99999999999


Q ss_pred             CcccCCCCCCC----CChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          160 GPIKDTAGVSK----LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       160 g~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      |+++|++....    .......+......|++|+++|+|+++.+.||++++++++||+.+.+|||+++
T Consensus       178 G~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~~v~fL~s~~s~~iTG~~i~VDGG~sl  245 (245)
T d2ag5a1         178 GTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVTGNPVIIDGGWSL  245 (245)
T ss_dssp             SCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECTTGGG
T ss_pred             ceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCCCcCceEEeCCCcCC
Confidence            99999875422    23345566777889999999999999999999999999999999999999875

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=7.9e-35  Score=241.17  Aligned_cols=217  Identities=21%  Similarity=0.300  Sum_probs=176.5

Q ss_pred             CCcHHHHHHHHHHHHhc-CCCeEEE-----------------EccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCC
Q 025124            2 GRRKTVLRSAVAALHSL-GIPAIGL-----------------EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP   63 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~-~~~~~~~-----------------~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~   63 (257)
                      .|+.+.++++.+++.+. +.....+                 .+|+++.++++++++++.+++|+||+||||||.....+
T Consensus        34 ~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~  113 (284)
T d1e7wa_          34 HRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTP  113 (284)
T ss_dssp             SSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred             CCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCHHHHHHHHHHHHHHhCCCCEEEecCCccCCCc
Confidence            35678889999999866 3444444                 45699999999999999999999999999999988888


Q ss_pred             CCCCCHHHHH--------------HHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhH
Q 025124           64 AEDLSPNGFR--------------TVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS  129 (257)
Q Consensus        64 ~~~~~~~~~~--------------~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~  129 (257)
                      +.+.+.++|+              .++.+|+.+++++++.+.+.+......  .....++|++++|.....+.+++..|+
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ii~~~s~~~~~~~~~~~~Y~  191 (284)
T d1e7wa_         114 LLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAK--HRGTNYSIINMVDAMTNQPLLGYTIYT  191 (284)
T ss_dssp             CCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGG--GSCSCEEEEEECCTTTTSCCTTCHHHH
T ss_pred             hhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhHHH--hcCCCCcccccccccccCCccceeeec
Confidence            8887777665              478999999999999999887643210  011268899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHHHHhhhhccC-CCCCCHHhHHHHHHHhccCCCC
Q 025124          130 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-YKFGEKWDIAMAALYLASDAGK  208 (257)
Q Consensus       130 ~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~  208 (257)
                      ++|+|+.+|+|+++.|++ ++|||||+|+||++.+...    ..++..+.+....|+ +|+++|+|+|++++||+++.++
T Consensus       192 asKaal~~lt~~lA~el~-~~gIrvN~I~PG~t~~~~~----~~~~~~~~~~~~~pl~~R~~~peeiA~~v~fL~S~~s~  266 (284)
T d1e7wa_         192 MAKGALEGLTRSAALELA-PLQIRVNGVGPGLSVLVDD----MPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAK  266 (284)
T ss_dssp             HHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBCCGGG----SCHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGT
T ss_pred             cccccchhhhHHHHHHhC-Ccccccccccccccccccc----CCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhc
Confidence            999999999999999999 9999999999998654322    235556666677775 8999999999999999999999


Q ss_pred             cccCcEEEecCCcccCC
Q 025124          209 YVNGNTLIVDGGNWLSN  225 (257)
Q Consensus       209 ~~~G~~~~~dgg~~~~~  225 (257)
                      |+||+++.+|||+++.+
T Consensus       267 ~itG~~i~VDGG~sl~r  283 (284)
T d1e7wa_         267 YITGTCVKVDGGYSLTR  283 (284)
T ss_dssp             TCCSCEEEESTTGGGCC
T ss_pred             CccCCeEEECcChhccC
Confidence            99999999999998764

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.7e-35  Score=242.18  Aligned_cols=207  Identities=17%  Similarity=0.118  Sum_probs=177.7

Q ss_pred             CCCcHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHH----HhCCccEEEeCCCCCC---CCCCCCCCHHH
Q 025124            1 MGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTIN----HFGKLDILVNAAAGNF---LVPAEDLSPNG   71 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~----~~g~id~li~~ag~~~---~~~~~~~~~~~   71 (257)
                      ++|++++++++.++|.+.  +.++.+++||++++++++++++.+.+    .++.+|++|||||...   ..++.+.+.++
T Consensus        39 ~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~  118 (259)
T d1oaaa_          39 SARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAE  118 (259)
T ss_dssp             EESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHH
T ss_pred             EECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHH
Confidence            479999999999999876  45789999999999999999999877    3457999999999653   35688999999


Q ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCC
Q 025124           72 FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA  151 (257)
Q Consensus        72 ~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~g  151 (257)
                      |++++++|+.++++++++++|+|++++.      ..|+||++||..+..+.++++.|+++|+|+++|+++|+.|   .+|
T Consensus       119 ~~~~~~vN~~~~~~l~~~~~~~m~~~~~------~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~la~e---~~g  189 (259)
T d1oaaa_         119 VNNYWALNLTSMLCLTSGTLNAFQDSPG------LSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLAAE---EPS  189 (259)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHTSCCCTT------CEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHH---CTT
T ss_pred             HHHHHHHhhhhhHHHHHHHHHHHHhcCC------CcccccccccccccCCCccchHHHHHHHHHHHHHHHHHhC---CCC
Confidence            9999999999999999999999987531      1479999999999999999999999999999999999998   458


Q ss_pred             eEEEEEecCcccCCCCCCC---CChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEe
Q 025124          152 IRVNGIAPGPIKDTAGVSK---LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIV  217 (257)
Q Consensus       152 i~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~  217 (257)
                      ||||+|+||++.|+|....   ...++....+....+.+++.+|+|+|+.+++|+++ ++++||+.|++
T Consensus       190 IrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~evA~~i~~ll~~-~s~~TG~~idv  257 (259)
T d1oaaa_         190 VRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGLLQK-DTFQSGAHVDF  257 (259)
T ss_dssp             EEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHHHHHHHH-CCSCTTEEEET
T ss_pred             CEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhh-ccCCCCCeEEe
Confidence            9999999999999875321   12244555566667888999999999999999986 57999999876

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-35  Score=237.21  Aligned_cols=184  Identities=15%  Similarity=0.130  Sum_probs=167.0

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|++++++++++++.+.+.+++.+.||++|+++++++++++.+++|++|++|||||......+.+.+.+.|++++++|+
T Consensus        37 ~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~  116 (244)
T d1yb1a_          37 WDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNV  116 (244)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHT
T ss_pred             EECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCceeEeeccccccccccccchhHHHhhcceee
Confidence            47999999999999999999999999999999999999999999999999999999999889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCC---CCeEEEEE
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTD---YAIRVNGI  157 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~---~gi~v~~v  157 (257)
                      .|+++++++++|.|.+++        .|+||++||..+..+.++++.|+++|+|+.+|+++|+.|+. +   +||+|++|
T Consensus       117 ~g~~~l~~~~lp~m~~~~--------~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~~~~~La~El~-~~~~~gI~V~~i  187 (244)
T d1yb1a_         117 LAHFWTTKAFLPAMTKNN--------HGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELA-ALQITGVKTTCL  187 (244)
T ss_dssp             HHHHHHHHHHHHHHHHTT--------CEEEEEECCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HTTCTTEEEEEE
T ss_pred             eccHHHHHHHhhhHHhcC--------CceEEEeecchhcCCCCCcHHHHHHHHHHHHHHHHHHHHHH-hhcCCCEEEEEE
Confidence            999999999999999987        89999999999999999999999999999999999999986 4   68999999


Q ss_pred             ecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccC
Q 025124          158 APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD  205 (257)
Q Consensus       158 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  205 (257)
                      +||+++|++....   .         .+.....+|+++++.+...+..
T Consensus       188 ~PG~v~T~~~~~~---~---------~~~~~~~~pe~va~~i~~~~~~  223 (244)
T d1yb1a_         188 CPNFVNTGFIKNP---S---------TSLGPTLEPEEVVNRLMHGILT  223 (244)
T ss_dssp             EETHHHHCSTTCT---H---------HHHCCCCCHHHHHHHHHHHHHT
T ss_pred             EcCCCCChhhhCc---C---------ccccCCCCHHHHHHHHHHHHhc
Confidence            9999999875331   0         1223567999999999887754

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2.5e-35  Score=249.08  Aligned_cols=188  Identities=23%  Similarity=0.259  Sum_probs=165.3

Q ss_pred             ccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC--CCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCC
Q 025124           27 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL--VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASS  104 (257)
Q Consensus        27 ~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~  104 (257)
                      +|+++.++++.+++.+.+.||+||++|||+|....  +++.+.+.++|++.+++|+++.+.++|+++|+|++        
T Consensus        92 ~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~~--------  163 (329)
T d1uh5a_          92 YNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKP--------  163 (329)
T ss_dssp             HHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--------
T ss_pred             hhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhccc--------
Confidence            47778899999999999999999999999996553  57889999999999999999999999999999965        


Q ss_pred             CCCceEEEEccccccccccc-chhhHHHHHHHHHHHHHHHHHhcCC-CCeEEEEEecCcccCCCCC--------------
Q 025124          105 SSGGIIINISATLHYTATWY-QIHVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAGV--------------  168 (257)
Q Consensus       105 ~~~g~ii~iss~~~~~~~~~-~~~Y~~sK~a~~~l~~~la~e~~~~-~gi~v~~v~Pg~v~t~~~~--------------  168 (257)
                        +|+||++||.++..+.|+ .+.|+++|+|+++|+|+|+.||+ + +|||||+|+||+++|+...              
T Consensus       164 --~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela-~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~~~~~~  240 (329)
T d1uh5a_         164 --QSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLG-RNYNIRINTISAGPLKSRAATAINKLNNTYENNTN  240 (329)
T ss_dssp             --EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHH-HHHCCEEEEEEECCCCCTTGGGCC-----------
T ss_pred             --ccccccceeehhcccccccchhhhhhhccccccchhhHHHHh-cccCcEEEEEecCcccchhhhcccchhhhhhhhhh
Confidence              689999999999988876 56799999999999999999998 6 6999999999999984211              


Q ss_pred             -----------------------------CCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecC
Q 025124          169 -----------------------------SKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDG  219 (257)
Q Consensus       169 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dg  219 (257)
                                                   .....+...+......|++|+.+|+|+|.+++||+|+.++++||+.|.+||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA~~v~fLaSd~s~~iTGq~i~VDG  320 (329)
T d1uh5a_         241 QNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQTIYVDN  320 (329)
T ss_dssp             -------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             hhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCchhCCccCCeEEECC
Confidence                                         111234566677788899999999999999999999999999999999999


Q ss_pred             CcccCC
Q 025124          220 GNWLSN  225 (257)
Q Consensus       220 g~~~~~  225 (257)
                      |+++..
T Consensus       321 G~~~~g  326 (329)
T d1uh5a_         321 GLNIMF  326 (329)
T ss_dssp             TGGGCS
T ss_pred             Cccccc
Confidence            997764

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-34  Score=240.41  Aligned_cols=190  Identities=21%  Similarity=0.217  Sum_probs=157.2

Q ss_pred             HHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHH
Q 025124            6 TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI   85 (257)
Q Consensus         6 ~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~   85 (257)
                      +++++..+++...+.++.++.||++|.++++.+++++.+  |.+|++|||+|.....++.+.+.++|++++++|+.|+++
T Consensus        43 ~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~--g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~  120 (285)
T d1jtva_          43 GRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE--GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVR  120 (285)
T ss_dssp             HHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT--SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHH
T ss_pred             HHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc--cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHH
Confidence            345555555555578999999999999999999998754  899999999999888999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCC
Q 025124           86 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT  165 (257)
Q Consensus        86 l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~  165 (257)
                      ++++++|+|++++        .|+||++||..+..+.++.+.|+++|+|+.+|+++|+.|+. ++|||||+|+||+++|+
T Consensus       121 ~~~~~lp~m~~~~--------~G~Iv~isS~~g~~~~~~~~~Y~asKaal~~l~~~la~El~-~~gIrVn~V~PG~v~T~  191 (285)
T d1jtva_         121 MLQAFLPDMKRRG--------SGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLL-PFGVHLSLIECGPVHTA  191 (285)
T ss_dssp             HHHHHHHHHHHHT--------CEEEEEEEEGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCC-
T ss_pred             HHHHHHHHHHHcC--------CCceEEEechhhcCCCCCchHHHHHHHHHHHHHHHHHHHhh-ccCcEEEEEecCCCCCh
Confidence            9999999999987        79999999999999999999999999999999999999999 99999999999999999


Q ss_pred             CCCCCCChHH---------HHHH------hhhhccCCCCCCHHhHHHHHHHhccCC
Q 025124          166 AGVSKLAPEE---------IRSK------ATDYMAAYKFGEKWDIAMAALYLASDA  206 (257)
Q Consensus       166 ~~~~~~~~~~---------~~~~------~~~~~~~~~~~~~~dva~~~~~l~~~~  206 (257)
                      +........+         ....      .....+..+..+|||||+.+++++...
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PeeVA~~v~~~~~~~  247 (285)
T d1jtva_         192 FMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRAP  247 (285)
T ss_dssp             ------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHHHHHHHHHCS
T ss_pred             HHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHHhCC
Confidence            8654433211         1111      112233456789999999999999654

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=8.6e-35  Score=236.91  Aligned_cols=203  Identities=19%  Similarity=0.144  Sum_probs=163.3

Q ss_pred             CCcHHHHHHHHHHHHhc-CCCeEEEEccCC-CHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSL-GIPAIGLEGDVR-KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~-~~~~~~~~~Dls-~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      +|+.++++++.+..... +.++.++.+|++ +.++++++++.+.+++|+||+||||||..        +.++|++++++|
T Consensus        36 ~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~iDilvnnAG~~--------~~~~~~~~~~vN  107 (254)
T d1sbya1          36 LDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGIL--------DDHQIERTIAIN  107 (254)
T ss_dssp             EESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSCCCEEEECCCCC--------CTTCHHHHHHHH
T ss_pred             ECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcCCCCEEEeCCCCC--------CHHHHHHHHHHH
Confidence            35555555554444433 457889999998 67789999999999999999999999953        567899999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                      +.|+++++++++|+|.+++.+.     .|+||+++|..+..+.+++..|+++|+|+.+|+++|+.|+. ++|||||+|+|
T Consensus       108 l~g~~~~~~~~~~~m~~~~~~~-----~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~el~-~~gIrVn~I~P  181 (254)
T d1sbya1         108 FTGLVNTTTAILDFWDKRKGGP-----GGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAP-ITGVTAYSINP  181 (254)
T ss_dssp             THHHHHHHHHHHHHHCGGGTCC-----CEEEEEECCGGGTSCCTTSHHHHHHHHHHHHHHHHHHHHHH-HHSEEEEEEEE
T ss_pred             hHHHHHHHHHHHHHhhhcccCC-----CceEEEEechhhccCCCCCHHHHHHHHHHHHHHHHHHhhcc-ccCeEEEEEEe
Confidence            9999999999999998764222     69999999999999999999999999999999999999999 99999999999


Q ss_pred             CcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       160 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                      |+++|++........+............+..+||++|+.++++++.   ..||+++.+|||.
T Consensus       182 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~~~~~---~~tG~vi~vdgG~  240 (254)
T d1sbya1         182 GITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEA---NKNGAIWKLDLGT  240 (254)
T ss_dssp             CSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHHH---CCTTCEEEEETTE
T ss_pred             CCCcCccccccccchhHHHHHHhccccCCCCCHHHHHHHHHHhhhC---CCCCCEEEECCCE
Confidence            9999987543322222222222222333456899999999888853   3599999999995

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=9.7e-34  Score=231.52  Aligned_cols=212  Identities=19%  Similarity=0.190  Sum_probs=184.3

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCC-----CCCCHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA-----EDLSPNGFRTVI   76 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~-----~~~~~~~~~~~~   76 (257)
                      +|+++. .+..+++.....+...+.+|+++..++...++++.+.++++|++|||++......+     .....+.|...+
T Consensus        38 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~  116 (258)
T d1qsga_          38 YQNDKL-KGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAH  116 (258)
T ss_dssp             ESSTTT-HHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHH
T ss_pred             eCCHHH-HHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcccccceEEEeecccccccccccccccchHHHHHHHH
Confidence            456443 34445555555678889999999999999999999999999999999987654333     345667789999


Q ss_pred             HHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEE
Q 025124           77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (257)
Q Consensus        77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~  156 (257)
                      ++|+.+.+.+++.+.+.|.+          ++.|+++||..+..+.+.+..|+++|+|+++|+|+++.|++ ++|||||+
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~----------~~~Ii~iss~~~~~~~~~~~~Y~~sKaal~~ltr~lA~el~-~~gIrVN~  185 (258)
T d1qsga_         117 DISSYSFVAMAKACRSMLNP----------GSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMG-PEGVRVNA  185 (258)
T ss_dssp             HHHTHHHHHHHHHHGGGEEE----------EEEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHHHHHHHHT-TTTEEEEE
T ss_pred             HHHHHHHHHHHHHHHHhccC----------CcEEEEecchhhccCCCCcHHHHHHHHHHHHHHHHHHHHhC-ccCceeec
Confidence            99999999999999998865          57799999999999999999999999999999999999999 99999999


Q ss_pred             EecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCC
Q 025124          157 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSN  225 (257)
Q Consensus       157 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~  225 (257)
                      |+||++.|++...........+......|++|+.+|||+|+++.||+++.++++||+++.+|||+++..
T Consensus       186 I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeia~~v~fL~s~~s~~itG~~i~vDGG~~i~g  254 (258)
T d1qsga_         186 ISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIAA  254 (258)
T ss_dssp             EEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGBC
T ss_pred             ccccccccccccccchhhhHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCccCceEEECcCHHHhc
Confidence            999999999877666667777788888999999999999999999999999999999999999988763

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-33  Score=232.49  Aligned_cols=189  Identities=21%  Similarity=0.210  Sum_probs=163.8

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|+++++++++++|++.+.++.++.||++|.++++++++++.+++|+||+||||||+.....+.+.+.++|+.++++|+
T Consensus        34 ~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~  113 (275)
T d1wmaa1          34 TARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNF  113 (275)
T ss_dssp             EESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHT
T ss_pred             EECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHH
Confidence            47999999999999999999999999999999999999999999999999999999998888888889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccc-------------------------------------
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-------------------------------------  123 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~-------------------------------------  123 (257)
                      .|++.++++++|+|++          .|+||+++|..+..+.+                                     
T Consensus       114 ~g~~~l~~~~lp~m~~----------~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (275)
T d1wmaa1         114 FGTRDVCTELLPLIKP----------QGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQ  183 (275)
T ss_dssp             HHHHHHHHHHGGGEEE----------EEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTT
T ss_pred             HHHHHHHHHHHHHHHh----------cCCcccccccceeccccccchhhhhhhcccccchhhhccccccchhcccccccc
Confidence            9999999999999965          58999999987643321                                     


Q ss_pred             ----cchhhHHHHHHHHHHHHHHHHHhc---CCCCeEEEEEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHH
Q 025124          124 ----YQIHVSAAKAAVDSITRSLALEWG---TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA  196 (257)
Q Consensus       124 ----~~~~Y~~sK~a~~~l~~~la~e~~---~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  196 (257)
                          +...|++||+++.+|++.++.|+.   ...||+||+|+||+++|+|....                 ...+|+|+|
T Consensus       184 ~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~-----------------~~~~pee~A  246 (275)
T d1wmaa1         184 KEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK-----------------ATKSPEEGA  246 (275)
T ss_dssp             TTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTT-----------------CSBCHHHHT
T ss_pred             cCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCc-----------------ccCCHHHHH
Confidence                234699999999999999999986   13589999999999999875322                 234799999


Q ss_pred             HHHHHhc--cCCCCcccCcEEE
Q 025124          197 MAALYLA--SDAGKYVNGNTLI  216 (257)
Q Consensus       197 ~~~~~l~--~~~~~~~~G~~~~  216 (257)
                      +++++++  +++....+|+.+.
T Consensus       247 ~~~~~~a~~~~~~~~~~G~~~~  268 (275)
T d1wmaa1         247 ETPVYLALLPPDAEGPHGQFVS  268 (275)
T ss_dssp             HHHHHHHSCCTTCCCCCSCEEE
T ss_pred             HHHHHHHcCChhhcCCCeEEEE
Confidence            9999986  4555667888775

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.1e-32  Score=219.58  Aligned_cols=207  Identities=19%  Similarity=0.270  Sum_probs=171.4

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC------CCCCCCCHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL------VPAEDLSPNGFRT   74 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~------~~~~~~~~~~~~~   74 (257)
                      ++|+.++++++.+++   +.+...+.+|+.+.+.++..+..+...++.+|.+++|+++...      .++.+.+.++|++
T Consensus        35 ~~r~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  111 (248)
T d2o23a1          35 LDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQR  111 (248)
T ss_dssp             EECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHH
T ss_pred             EeCChHHHHHHHHHh---CCCcccccccccccccccccccccccccccccccccccccccCCCcccccccccchHHHHHH
Confidence            367888888877666   4578899999999999999999999999999999999875433      4567788999999


Q ss_pred             HHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEE
Q 025124           75 VIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRV  154 (257)
Q Consensus        75 ~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v  154 (257)
                      ++++|+.++++++++++|+|..+...  ....+|+||++||..+..+.++++.|+++|+|+.+|+|+|+.|++ ++||||
T Consensus       112 ~~~vnl~~~~~~~~~~~~~~~~~~~~--~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~la~e~~-~~gIrv  188 (248)
T d2o23a1         112 VLDVNLMGTFNVIRLVAGEMGQNEPD--QGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLA-PIGIRV  188 (248)
T ss_dssp             HHHHHTHHHHHHHHHHHHHHTTSCCC--TTSCCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEE
T ss_pred             HHhHHHHHHHHHHHHhHHHHHHhhhh--ccCCceEEEEecchhhccCCCCchHHHHHHHHHHHHHHHHHHHhc-ccCcce
Confidence            99999999999999999999865311  112268999999999999999999999999999999999999999 999999


Q ss_pred             EEEecCcccCCCCCCCCChHHHHHHhhhhccC-CCCCCHHhHHHHHHHhccCCCCcccCcEEEe
Q 025124          155 NGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-YKFGEKWDIAMAALYLASDAGKYVNGNTLIV  217 (257)
Q Consensus       155 ~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~  217 (257)
                      |+|+||++.|++....  .++..+......|+ +|+++|+|+|++++||++  ++|+||++|.+
T Consensus       189 N~I~PG~i~T~~~~~~--~~~~~~~~~~~~pl~~R~g~peevA~~v~fL~s--~~~itGq~I~v  248 (248)
T d2o23a1         189 MTIAPGLFGTPLLTSL--PEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIE--NPFLNGEVIRL  248 (248)
T ss_dssp             EEEEECCBCCC------------CHHHHTCSSSCSCBCHHHHHHHHHHHHH--CTTCCSCEEEE
T ss_pred             eeeccCceecchhhcC--CHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHHh--CCCCCceEeEC
Confidence            9999999999876432  23444455566665 889999999999999996  57999999875

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.98  E-value=1.1e-31  Score=218.02  Aligned_cols=202  Identities=19%  Similarity=0.152  Sum_probs=159.2

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHH--HhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN--HFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIE   77 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~--~~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~   77 (257)
                      ++|++++++++.+ +.+.+.++.++.||++|+++++++++++.+  .+++||++|||||+... ..+.+.+.++|+++++
T Consensus        35 ~~r~~~~~~~~~~-~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~  113 (248)
T d1snya_          35 TCRNREQAKELED-LAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQ  113 (248)
T ss_dssp             EESCTTSCHHHHH-HHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred             EECCHHHHHHHHH-HHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHH
Confidence            3688888888764 444467899999999999999999999854  67899999999997654 5678899999999999


Q ss_pred             HHhHHHHHHHHHHHHHHHhcCCCC---CCCCCCceEEEEccccccc---ccccchhhHHHHHHHHHHHHHHHHHhcCCCC
Q 025124           78 IDSVGTFIMCHEALKYLKKGGRGQ---ASSSSGGIIINISATLHYT---ATWYQIHVSAAKAAVDSITRSLALEWGTDYA  151 (257)
Q Consensus        78 ~n~~~~~~l~~~~~~~~~~~~~~~---~~~~~~g~ii~iss~~~~~---~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~g  151 (257)
                      +|+.|++.++++++|+|+++..+.   ......|++|+++|..+..   +.+++..|++||+|+.+|+++++.|+. ++|
T Consensus       114 vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~~~~~~~~~Y~aSKaal~~lt~~la~e~~-~~g  192 (248)
T d1snya_         114 TNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLY-PQR  192 (248)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHG-GGT
T ss_pred             hccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccCCCCCCChHHHHHHHHHHHHHHHHHHHHhC-CCC
Confidence            999999999999999998753111   1122368999999988764   345677999999999999999999999 999


Q ss_pred             eEEEEEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          152 IRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       152 i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                      |+|++|+||+++|+|.....                 ...+++.++.++.++.......+|+++.+||+.
T Consensus       193 I~vn~v~PG~v~T~m~~~~~-----------------~~~~~~~~~~i~~~i~~l~~~~tG~~i~~dG~~  245 (248)
T d1snya_         193 IMCVSLHPGWVKTDMGGSSA-----------------PLDVPTSTGQIVQTISKLGEKQNGGFVNYDGTP  245 (248)
T ss_dssp             CEEEEECCCSBCSTTTCTTC-----------------SBCHHHHHHHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred             eEEEEcCCCcccCCcccccC-----------------CCCchHHHHHHHHHHHhcCccCCCcEEEECCeE
Confidence            99999999999999764321                 123333344444444433344689999998863

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.98  E-value=1e-30  Score=214.13  Aligned_cols=216  Identities=24%  Similarity=0.292  Sum_probs=174.0

Q ss_pred             CCc-HHHHHHHHHHHHhc-CCCeEEEEccCC----CHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCC----------
Q 025124            2 GRR-KTVLRSAVAALHSL-GIPAIGLEGDVR----KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAE----------   65 (257)
Q Consensus         2 ~r~-~~~l~~~~~~l~~~-~~~~~~~~~Dls----~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~----------   65 (257)
                      +|+ +...+++++++.+. +.+...+.+|+.    ..+.++++++++.+++|+||++|||||+.....+.          
T Consensus        32 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~  111 (266)
T d1mxha_          32 YRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAAD  111 (266)
T ss_dssp             ESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC---------
T ss_pred             ECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHhCCCCEEEECCccCCCCcccccccccchhc
Confidence            455 44567888888876 566777776664    35678888899999999999999999977655433          


Q ss_pred             -CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHH
Q 025124           66 -DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL  144 (257)
Q Consensus        66 -~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~  144 (257)
                       +.....+...+..|+.+.+...+...+.+......   ....+.++++++..+..+.+++..|++||+|+++|+++++.
T Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~lt~~lA~  188 (266)
T d1mxha_         112 AKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAW---RSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAAL  188 (266)
T ss_dssp             --CHHHHHHHHHHHHTHHHHHHHHHHHHTC----------CCCEEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccchhhhhcccccccccc---ccccccchhhhhccccccCcchhhhhhhHHHHhhhHHHHHH
Confidence             23345677788899999999998888777654311   11257889999999999999999999999999999999999


Q ss_pred             HhcCCCCeEEEEEecCcccCCCCCCCCChHHHHHHhhhhccCCCC-CCHHhHHHHHHHhccCCCCcccCcEEEecCCccc
Q 025124          145 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKF-GEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL  223 (257)
Q Consensus       145 e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~  223 (257)
                      |+. ++|||||+|+||+++|++..    .++..+.+....|+++. ++|||+|.+++||+++.++++||++|.+|||+++
T Consensus       189 e~~-~~gIrVN~I~PG~i~t~~~~----~~~~~~~~~~~~pl~r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~l  263 (266)
T d1mxha_         189 ELA-PRHIRVNAVAPGLSLLPPAM----PQETQEEYRRKVPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLIL  263 (266)
T ss_dssp             HHG-GGTEEEEEEEESSBSCCSSS----CHHHHHHHHTTCTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HhC-ccCcEEEEeccCcEeccccC----CHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhCCccCCeEEECccHhh
Confidence            999 99999999999999988643    35666677788888765 7999999999999999999999999999999987


Q ss_pred             CC
Q 025124          224 SN  225 (257)
Q Consensus       224 ~~  225 (257)
                      ..
T Consensus       264 ~~  265 (266)
T d1mxha_         264 AR  265 (266)
T ss_dssp             CC
T ss_pred             hC
Confidence            64

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.97  E-value=2.4e-31  Score=219.08  Aligned_cols=212  Identities=23%  Similarity=0.194  Sum_probs=169.0

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCC----CCCCCHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP----AEDLSPNGFRTVIE   77 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~----~~~~~~~~~~~~~~   77 (257)
                      +|+ +++++.++++.+.+....++.+|+++.++++++++++.+.+|++|++|||+|......    +.+...+.+...+.
T Consensus        38 ~r~-~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~  116 (274)
T d2pd4a1          38 YLN-ESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAME  116 (274)
T ss_dssp             ESS-TTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHH
T ss_pred             eCC-HHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcCCCCeEEeecccccccccccccccccchhhhhhhc
Confidence            566 3455666777777778889999999999999999999999999999999999765432    23333444444444


Q ss_pred             HHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEE
Q 025124           78 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (257)
Q Consensus        78 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v  157 (257)
                      ++..+.+.+.+.+.+.+..          .+.|+++++.+...+.+....|+++|+|+.+|+|+++.|++ ++|||||+|
T Consensus       117 ~~~~~~~~~~~~~~~~~~~----------~~~i~~~s~~~~~~~~~~~~~y~asK~al~~ltr~lA~e~~-~~GIrvN~I  185 (274)
T d2pd4a1         117 ISVYSLIELTNTLKPLLNN----------GASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLG-KHHIRVNAL  185 (274)
T ss_dssp             HHTHHHHHHHHHHGGGEEE----------EEEEEEEECGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEE
T ss_pred             ccccccccccccccccccc----------CcceeeecccccccccccchhhhHHHHHHHHHHHhhHHHhc-CcCceeccc
Confidence            4444444444444332211          35577777777777788889999999999999999999999 999999999


Q ss_pred             ecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCC
Q 025124          158 APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSN  225 (257)
Q Consensus       158 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~  225 (257)
                      +||++.|++.......++.........|++++.+|+|+|..++||+|+.++++||++|.+|||+++..
T Consensus       186 ~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedIA~~v~fL~S~~s~~itG~~i~vDGG~~~~g  253 (274)
T d2pd4a1         186 SAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGYHVMG  253 (274)
T ss_dssp             EECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBS
T ss_pred             ccCcccCccccccCchHHHHHHHhhhhhccCCcCHHHHHHHHHHHhChhhCCCcCceEEECCChhhcc
Confidence            99999999876666667777777788899999999999999999999999999999999999997643

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.97  E-value=3.3e-32  Score=226.69  Aligned_cols=185  Identities=26%  Similarity=0.268  Sum_probs=161.6

Q ss_pred             CCHHHHHHHHHHHHHHhCCccEEEeCCCCCC--CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCC
Q 025124           30 RKREDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSG  107 (257)
Q Consensus        30 s~~~~~~~~~~~~~~~~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~  107 (257)
                      ++..+++++++++.++||+||++|||||...  ..++.+.+.++|++.+++|+.+++.+++++++.|.+          +
T Consensus       101 ~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~----------~  170 (297)
T d1d7oa_         101 SSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNP----------G  170 (297)
T ss_dssp             CCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE----------E
T ss_pred             ccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHHHhhc----------C
Confidence            5566778999999999999999999999754  467899999999999999999999999999988876          4


Q ss_pred             ceEEEEcccccc-cccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHHHHhhhhccC
Q 025124          108 GIIINISATLHY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA  186 (257)
Q Consensus       108 g~ii~iss~~~~-~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  186 (257)
                      |.++++++.+.. ...+....|+++|+++.++++.++.|+..++|||||+|+||++.|++.......++..+......|+
T Consensus       171 g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl  250 (297)
T d1d7oa_         171 GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPI  250 (297)
T ss_dssp             EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHHHHHHHSSS
T ss_pred             CcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhccCCHHHHHHHHhCCCC
Confidence            556666665544 3456778899999999999999999995257999999999999999877655566777888888999


Q ss_pred             CCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccC
Q 025124          187 YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS  224 (257)
Q Consensus       187 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~  224 (257)
                      +|+.+|+|+|.+++||+++.++++||+++.+|||++..
T Consensus       251 gR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~s~~  288 (297)
T d1d7oa_         251 QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSM  288 (297)
T ss_dssp             CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             CCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCHhhc
Confidence            99999999999999999999999999999999998764

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.97  E-value=8.4e-30  Score=205.75  Aligned_cols=197  Identities=23%  Similarity=0.296  Sum_probs=159.0

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC----CCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF----LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKK   96 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~   96 (257)
                      +...+.+|+++......+......... .+.++++++...    .......+.+.|++.+++|+.+.+.+++.+.+.+..
T Consensus        39 ~~~~~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~  117 (241)
T d1uaya_          39 DLIYVEGDVTREEDVRRAVARAQEEAP-LFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRE  117 (241)
T ss_dssp             SSEEEECCTTCHHHHHHHHHHHHHHSC-EEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred             cceEeeccccchhhhHHHHHhhhcccc-ccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhh
Confidence            445678999999999999888777654 455555555322    245566788999999999999999999999999655


Q ss_pred             cCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHH
Q 025124           97 GGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI  176 (257)
Q Consensus        97 ~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~  176 (257)
                      ...  ......|+||++||..+..+.+++..|+++|+|+.+|+|+++.|++ ++|||||+|+||+++|++.....  ...
T Consensus       118 ~~~--~~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~ela-~~gIrVN~V~PG~i~T~~~~~~~--~~~  192 (241)
T d1uaya_         118 NPP--DAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELA-GWGIRVVTVAPGLFDTPLLQGLP--EKA  192 (241)
T ss_dssp             CCC--CTTSCSEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSCSSHHHHTSC--HHH
T ss_pred             hhh--hcccCceeeeeecchhhccCCCCchhhHHHHHHHHHHHHHHHHHHh-hcCCceeeecCCcccccccchhh--hhH
Confidence            321  0111279999999999999999999999999999999999999999 99999999999999998765443  333


Q ss_pred             HHHhhhhcc-CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCC
Q 025124          177 RSKATDYMA-AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSN  225 (257)
Q Consensus       177 ~~~~~~~~~-~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~  225 (257)
                      ........+ .+|+++|+|+|++++||++  ++|+||+++.+|||+++.+
T Consensus       193 ~~~~~~~~~~~~R~g~pedvA~~v~fL~s--~~~iTG~~i~VDGG~~m~p  240 (241)
T d1uaya_         193 KASLAAQVPFPPRLGRPEEYAALVLHILE--NPMLNGEVVRLDGALRMAP  240 (241)
T ss_dssp             HHHHHTTCCSSCSCCCHHHHHHHHHHHHH--CTTCCSCEEEESTTCCCCC
T ss_pred             HHHHHhcCCCCCCCcCHHHHHHHHHHHHh--CCCCCCCEEEECCcccCCC
Confidence            333444444 4889999999999999997  4789999999999988764

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.97  E-value=1.2e-29  Score=206.21  Aligned_cols=197  Identities=16%  Similarity=0.134  Sum_probs=153.5

Q ss_pred             CCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC--CccEEEeCCCCCC-CCCCCCCCHHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG--KLDILVNAAAGNF-LVPAEDLSPNGFRTVIEI   78 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g--~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~   78 (257)
                      +|++++++++.+   ..+.+++++.||+++.++++++++++.+.++  +||++|||||+.. ..++.+.+.++|++++++
T Consensus        36 ~R~~~~~~~l~~---~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~v  112 (250)
T d1yo6a1          36 ARDVEKATELKS---IKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDV  112 (250)
T ss_dssp             ESSGGGCHHHHT---CCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHH
T ss_pred             eCCHHHHHHHHH---hhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHH
Confidence            688888776542   2356899999999999999999999999887  4999999999765 477889999999999999


Q ss_pred             HhHHHHHHHHHHHHHHHhcCCC---CCCCCCCceEEEEccccccccc-------ccchhhHHHHHHHHHHHHHHHHHhcC
Q 025124           79 DSVGTFIMCHEALKYLKKGGRG---QASSSSGGIIINISATLHYTAT-------WYQIHVSAAKAAVDSITRSLALEWGT  148 (257)
Q Consensus        79 n~~~~~~l~~~~~~~~~~~~~~---~~~~~~~g~ii~iss~~~~~~~-------~~~~~Y~~sK~a~~~l~~~la~e~~~  148 (257)
                      |+.|++.+++.++|+|+++..+   .......+.++++++.......       .+...|++||+|+.+|+++|+.|+. 
T Consensus       113 N~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~-  191 (250)
T d1yo6a1         113 NTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLK-  191 (250)
T ss_dssp             HTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTG-
T ss_pred             HhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCCcccccchhHHHHHHHHHHHHHHHHHHHHHhc-
Confidence            9999999999999999875321   1223346889999987655432       2345799999999999999999999 


Q ss_pred             CCCeEEEEEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecC
Q 025124          149 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDG  219 (257)
Q Consensus       149 ~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dg  219 (257)
                      +.||+|++|+||+++|+|....                 ...+||+.+..++..+.......+|..+..||
T Consensus       192 ~~gI~v~~i~PG~v~T~m~~~~-----------------~~~~~e~~a~~~~~~~~~~~~~~sG~f~~~~g  245 (250)
T d1yo6a1         192 DDNVLVVNFCPGWVQTNLGGKN-----------------AALTVEQSTAELISSFNKLDNSHNGRFFMRNL  245 (250)
T ss_dssp             GGTCEEEEEECCCC------------------------------HHHHHHHHHHHTTCCGGGTTCEEETTE
T ss_pred             ccCeEEEEEecCCCCCCCCCCC-----------------CCCCHHHHHHHHHHHHhcCCCCCCeEEECCCC
Confidence            9999999999999999864211                 23578999999999997666667898887765

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=7.2e-30  Score=205.67  Aligned_cols=199  Identities=17%  Similarity=0.061  Sum_probs=161.6

Q ss_pred             HHHHHHHHhcCCCe--------------EEEEccCCCHHHHHHHHHHHHHHhC--CccEEEeCCCCCCC-CCCCCCCHHH
Q 025124            9 RSAVAALHSLGIPA--------------IGLEGDVRKREDAVRVVESTINHFG--KLDILVNAAAGNFL-VPAEDLSPNG   71 (257)
Q Consensus         9 ~~~~~~l~~~~~~~--------------~~~~~Dls~~~~~~~~~~~~~~~~g--~id~li~~ag~~~~-~~~~~~~~~~   71 (257)
                      ..+++.+.+.|.++              ..+.+|.++.++.+.+...+.+.++  +||++|||||+... ..+.+.+.++
T Consensus        16 ~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~   95 (236)
T d1dhra_          16 SRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKN   95 (236)
T ss_dssp             HHHHHHHHTTTCEEEEEESSCCTTSSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHH
T ss_pred             HHHHHHHHHCCCEEEEEeCCccccccccceeecccCcHHHHHHHHHHHHHHhCCCCceEEEECCcccccccchhcCCHHH
Confidence            34566666666443              3446788888899988888888765  79999999996544 5667777899


Q ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcC-CC
Q 025124           72 FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT-DY  150 (257)
Q Consensus        72 ~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~-~~  150 (257)
                      |++++++|+.++++++++++|+|++          +|+||++||.++..+.+++..|++||+|+++|+++|+.|++. ++
T Consensus        96 ~~~~~~~n~~~~~~~~~~~~~~m~~----------~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~la~El~~~~~  165 (236)
T d1dhra_          96 CDLMWKQSIWTSTISSHLATKHLKE----------GGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPS  165 (236)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHEEE----------EEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHTSTTSSCCT
T ss_pred             HHHHHHHcchHHHHHHHHHHHhccc----------ccceeEEccHHHcCCccCCcccHHHHHHHHHHHHHHHHHhccCCC
Confidence            9999999999999999999999965          689999999999999999999999999999999999999972 47


Q ss_pred             CeEEEEEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEe--cCCcccCCCC
Q 025124          151 AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIV--DGGNWLSNPR  227 (257)
Q Consensus       151 gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~--dgg~~~~~~~  227 (257)
                      |||||+|+||+++|++...          ........++..|+++++.+.+|+++.+.+++|..+.+  ++|.+...|.
T Consensus       166 gI~vn~v~PG~v~T~~~~~----------~~~~~~~~~~~~pe~va~~~~~l~s~~~~~i~G~~i~v~~~~g~t~~~p~  234 (236)
T d1dhra_         166 GAAAIAVLPVTLDTPMNRK----------SMPEADFSSWTPLEFLVETFHDWITGNKRPNSGSLIQVVTTDGKTELTPA  234 (236)
T ss_dssp             TCEEEEEEESCEECHHHHH----------HSTTSCGGGSEEHHHHHHHHHHHHTTTTCCCTTCEEEEEEETTEEEEEEE
T ss_pred             cEEEEEEEeccCcCCcchh----------hCccchhhcCCCHHHHHHHHHHHhCCCccCCCCCeEEEEEECCEEEEEec
Confidence            9999999999999985321          11222345678899999999999999999999987765  4555444343

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.96  E-value=2.2e-29  Score=206.45  Aligned_cols=207  Identities=23%  Similarity=0.156  Sum_probs=166.8

Q ss_pred             CCcHHHHHHHHHHHH-hcCCCeEEEEccCCCHHHHHHHHHHHHHHh---CCccEEEeCCCCCCC-----CCCCCCCHHHH
Q 025124            2 GRRKTVLRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVESTINHF---GKLDILVNAAAGNFL-----VPAEDLSPNGF   72 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~-~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~---g~id~li~~ag~~~~-----~~~~~~~~~~~   72 (257)
                      +|+.+++.   +++. +.+.+...+.||++++++++.+++.+.+.+   +.||++|||+|....     .++.+.+.++|
T Consensus        39 ~~~~~~~~---~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~  115 (268)
T d2h7ma1          39 GFDRLRLI---QRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADV  115 (268)
T ss_dssp             ECSCHHHH---HHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHH
T ss_pred             eCChHHHH---HHHHHHcCCceeeEeeecccccccccccchhhhccccCCCcceeeecccccCccccccccccccchhhh
Confidence            45555543   2333 346778899999999999999999998875   579999999996532     35677889999


Q ss_pred             HHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCe
Q 025124           73 RTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAI  152 (257)
Q Consensus        73 ~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi  152 (257)
                      ...+.+|+.+.+...+.+.+.+.           .+.+++++|.....+.+++..|+++|+|+.+|+++++.|++ ++||
T Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~i~~~s~~~~~~~p~~~~y~~sK~a~~~ltr~lA~e~~-~~gI  183 (268)
T d2h7ma1         116 SKGIHISAYSYASMAKALLPIMN-----------PGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREAG-KYGV  183 (268)
T ss_dssp             HHHHHHHTHHHHHHHHHHGGGEE-----------EEEEEEEEECCCSSCCTTTHHHHHHHHHHHHHHHHHHHHHH-TTTC
T ss_pred             hhhhhhhhhHHHHHHHHHhhhcc-----------cccccccccccccccCcccchhhccccchhhccccchhhhh-ccCC
Confidence            99999999999999988876543           34466677777778888999999999999999999999999 9999


Q ss_pred             EEEEEecCcccCCCCCC----CCCh------HHHHHHhhhhccCCC-CCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          153 RVNGIAPGPIKDTAGVS----KLAP------EEIRSKATDYMAAYK-FGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       153 ~v~~v~Pg~v~t~~~~~----~~~~------~~~~~~~~~~~~~~~-~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                      |||+|+||++.|++...    ....      +...+......|+++ +.+|+|+|+.+.||+++.++++||+.|.+|||+
T Consensus       184 rVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~  263 (268)
T d2h7ma1         184 RSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGA  263 (268)
T ss_dssp             EEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTG
T ss_pred             cceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCc
Confidence            99999999999986421    1111      223445556677766 899999999999999999999999999999998


Q ss_pred             cc
Q 025124          222 WL  223 (257)
Q Consensus       222 ~~  223 (257)
                      +.
T Consensus       264 ~~  265 (268)
T d2h7ma1         264 HT  265 (268)
T ss_dssp             GG
T ss_pred             cc
Confidence            64

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.8e-28  Score=201.09  Aligned_cols=185  Identities=19%  Similarity=0.176  Sum_probs=161.5

Q ss_pred             CCCcHHHHHHHHHHHHhc-CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            1 MGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      ++|++++++++.+++.+. +..+..+.+|+++.+.+...++.+.+.+|.+|++|||+|......+.+.+.++|++++++|
T Consensus        44 ~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN  123 (269)
T d1xu9a_          44 TARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVN  123 (269)
T ss_dssp             EESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhCCccccccccccccccccccCCHHHhhhheeee
Confidence            479999999999988765 6678899999999999999999999999999999999999888899999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEe
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIA  158 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~~gi~v~~v~  158 (257)
                      +.+++.++++++|+|+++         +|+||++||.++..+.++++.|++||+|+.+|+++|+.|++ .+.||+|++|+
T Consensus       124 ~~~~~~~~~~~lp~m~~~---------~G~ii~isS~~~~~~~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~  194 (269)
T d1xu9a_         124 FLSYVVLTVAALPMLKQS---------NGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCV  194 (269)
T ss_dssp             THHHHHHHHHHHHHHHHH---------TCEEEEEEEGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEE
T ss_pred             hhhHHHHHHHHHHHHHhc---------CCcceEeccchhcCCCCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEe
Confidence            999999999999999865         69999999999999999999999999999999999999986 14579999999


Q ss_pred             cCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhcc
Q 025124          159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS  204 (257)
Q Consensus       159 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  204 (257)
                      ||+++|++....          ....+.....+|+++++.++....
T Consensus       195 PG~v~T~~~~~~----------~~~~~~~~~~~~e~~a~~i~~~~~  230 (269)
T d1xu9a_         195 LGLIDTETAMKA----------VSGIVHMQAAPKEECALEIIKGGA  230 (269)
T ss_dssp             ECCBCCHHHHHH----------SCGGGGGGCBCHHHHHHHHHHHHH
T ss_pred             cCcCCCcHHHHh----------ccCCccccCCCHHHHHHHHHHHhh
Confidence            999998754211          111122234689999999887664

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.95  E-value=5.9e-28  Score=194.29  Aligned_cols=196  Identities=18%  Similarity=0.112  Sum_probs=154.5

Q ss_pred             HHHHHHHHhcCCCeE--------------EEEccCCCHHHHHHHHHHHHHH--hCCccEEEeCCCCCCC-CCCCCCCHHH
Q 025124            9 RSAVAALHSLGIPAI--------------GLEGDVRKREDAVRVVESTINH--FGKLDILVNAAAGNFL-VPAEDLSPNG   71 (257)
Q Consensus         9 ~~~~~~l~~~~~~~~--------------~~~~Dls~~~~~~~~~~~~~~~--~g~id~li~~ag~~~~-~~~~~~~~~~   71 (257)
                      ..+++.+.+.|.++.              .+.+|+.+.+......+.+.+.  +++||+||||||+... ..+.+.+.+.
T Consensus        16 ~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~linnAG~~~~~~~~~~~~~~~   95 (235)
T d1ooea_          16 SAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKN   95 (235)
T ss_dssp             HHHHHHHHHTTEEEEEEESSCCTTSSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHH
T ss_pred             HHHHHHHHHCCCEEEEEECCchhcccccceeccccCchhHHHHHHHHHHHHhcCCCeeEEEECCcccccccccccCcHHH
Confidence            345666666654433              3457777778888777777774  5899999999997654 4566667789


Q ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhc-CCC
Q 025124           72 FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG-TDY  150 (257)
Q Consensus        72 ~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~~  150 (257)
                      |+.++++|+.+++.++++++|+|++          +|+||++||..+..+.+++..|+++|+|+.+|+++|+.|++ .+.
T Consensus        96 ~~~~~~~n~~~~~~~~~~~~~~m~~----------~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~~~  165 (235)
T d1ooea_          96 ADLMIKQSVWSSAIAAKLATTHLKP----------GGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPD  165 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHEEE----------EEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHHSTTSSCCT
T ss_pred             HhhHhhhHHHHHHHHhhhccccccc----------ceEEEEeccHHhcCCcccccchHHHHHHHHHHHHHHHHHhccCCC
Confidence            9999999999999999999999965          68999999999999999999999999999999999999996 246


Q ss_pred             CeEEEEEecCcccCCCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHh-ccCCCCcccCcEEEe---cCCcccC
Q 025124          151 AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL-ASDAGKYVNGNTLIV---DGGNWLS  224 (257)
Q Consensus       151 gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l-~~~~~~~~~G~~~~~---dgg~~~~  224 (257)
                      +|+|++|+||+++|++..          ......+..++..|+++++.++++ .++.+++++|..+.+   +|+..+.
T Consensus       166 ~i~v~~i~Pg~~~T~~~~----------~~~~~~~~~~~~~~~~va~~~~~~l~~~~~~~~tG~~i~v~~~~g~~~~~  233 (235)
T d1ooea_         166 NSAVLTIMPVTLDTPMNR----------KWMPNADHSSWTPLSFISEHLLKWTTETSSRPSSGALLKITTENGTSTIT  233 (235)
T ss_dssp             TCEEEEEEESCBCCHHHH----------HHSTTCCGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEETTEEEEE
T ss_pred             ceEEEEEecCcCcCcchh----------hhCcCCccccCCCHHHHHHHHHHHhcCccccCCCceEEEEEeeCCEEEEc
Confidence            899999999999987532          111223345678999999998754 455667799999888   4444443

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.95  E-value=4.8e-27  Score=191.22  Aligned_cols=199  Identities=21%  Similarity=0.274  Sum_probs=144.4

Q ss_pred             HHHHHHHHhcCCCeEEE-------EccCCCHHHHHHHHHHHHHHh-CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            9 RSAVAALHSLGIPAIGL-------EGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         9 ~~~~~~l~~~~~~~~~~-------~~Dls~~~~~~~~~~~~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ..++..|.+.|.++...       .+|+++.+..+.....+..+. +.+|++|||||+...       .+.+.....+|.
T Consensus        15 ~aiA~~la~~Ga~V~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~id~lv~~Ag~~~~-------~~~~~~~~~~~~   87 (257)
T d1fjha_          15 AATRKVLEAAGHQIVGIDIRDAEVIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQ-------TKVLGNVVSVNY   87 (257)
T ss_dssp             HHHHHHHHHTTCEEEEEESSSSSEECCTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCTT-------CSSHHHHHHHHT
T ss_pred             HHHHHHHHHCCCEEEEEECChHHHHHHhcCHHHHHHHHHHHHHHhCCCCcEEEEcCCCCCc-------HHHHHHHHHHHH
Confidence            45677888888776543       478888888888776666554 579999999996432       344678889999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccc---------------------------cccc-cccchhhHHHH
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL---------------------------HYTA-TWYQIHVSAAK  132 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~---------------------------~~~~-~~~~~~Y~~sK  132 (257)
                      .+...+.+.+.+.+.+..        .+...++.+..                           +..+ .++...|+++|
T Consensus        88 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~~~~~~~~~~~Y~asK  159 (257)
T d1fjha_          88 FGATELMDAFLPALKKGH--------QPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSK  159 (257)
T ss_dssp             HHHHHHHHHHHHHHHTSS--------SCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHHHHH
T ss_pred             HHHHHHHHHhhhhhhhhc--------cCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehhccCCCcchHHHHHHh
Confidence            999999999999988765        45555555432                           2222 23455799999


Q ss_pred             HHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHHHHHHhhh-hccCCCCCCHHhHHHHHHHhccCCCCccc
Q 025124          133 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD-YMAAYKFGEKWDIAMAALYLASDAGKYVN  211 (257)
Q Consensus       133 ~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~~~~l~~~~~~~~~  211 (257)
                      +|+++|+|+++.||+ ++|||||+|+||+++|++.......+...+...+ ..|++|+++|+|+|++++||+|+.++++|
T Consensus       160 aal~~ltr~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~PlgR~g~p~eva~~v~fL~S~~s~~it  238 (257)
T d1fjha_         160 NALTVAVRKRAAAWG-EAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMASVIAFLMSPAASYVH  238 (257)
T ss_dssp             HHHHHHHHHTHHHHH-HTTCEEEEEEECC---------------------CCCSTTSCCCTHHHHHHHHHHTSGGGTTCC
T ss_pred             hhhhccccccccccc-cccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhCCcc
Confidence            999999999999999 9999999999999999987655544444333333 36899999999999999999999999999


Q ss_pred             CcEEEecCCccc
Q 025124          212 GNTLIVDGGNWL  223 (257)
Q Consensus       212 G~~~~~dgg~~~  223 (257)
                      |+++.+|||++.
T Consensus       239 G~~i~vDGG~ta  250 (257)
T d1fjha_         239 GAQIVIDGGIDA  250 (257)
T ss_dssp             SCEEEESTTHHH
T ss_pred             CceEEeCCCccc
Confidence            999999999754

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.88  E-value=1.2e-22  Score=165.23  Aligned_cols=178  Identities=12%  Similarity=-0.008  Sum_probs=141.4

Q ss_pred             HHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHH
Q 025124            5 KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF   84 (257)
Q Consensus         5 ~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~   84 (257)
                      .+.++++.+++.+.|.++.++.||++|.++++++++++.+. +++|++|||+|.....++.+.+.++|+.++++|+.+++
T Consensus        47 ~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~-~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~  125 (259)
T d2fr1a1          47 ADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD-VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGAR  125 (259)
T ss_dssp             STTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT-SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc-ccccccccccccccccccccccHHHHHHHhhhhccchh
Confidence            45677888888888899999999999999999999988664 68999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccC
Q 025124           85 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD  164 (257)
Q Consensus        85 ~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t  164 (257)
                      ++.+.+    ...+        .++||++||..+..+.++++.|+++|+++++|++.++     ..|+++++|+||.+.+
T Consensus       126 ~l~~~~----~~~~--------~~~iv~~SS~a~~~g~~~~~~YaAaka~l~~la~~~~-----~~Gi~v~~I~pg~~~~  188 (259)
T d2fr1a1         126 NLHELT----RELD--------LTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQQRR-----SDGLPATAVAWGTWAG  188 (259)
T ss_dssp             HHHHHH----TTSC--------CSEEEEEEEHHHHTCCTTCTTTHHHHHHHHHHHHHHH-----HTTCCCEEEEECCBC-
T ss_pred             HHHHHh----hccC--------CceEeeecchhhccCCcccHHHHHHHHhHHHHHHHHH-----hCCCCEEECCCCcccC
Confidence            887754    3333        6899999999999999999999999999998887665     4489999999999976


Q ss_pred             CCCCCCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCC
Q 025124          165 TAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA  206 (257)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  206 (257)
                      +.+....    ..+.+ .... ...++|+++++.+..++...
T Consensus       189 ~g~~~~~----~~~~~-~~~G-~~~~~~~~~~~~l~~~l~~~  224 (259)
T d2fr1a1         189 SGMAEGP----VADRF-RRHG-VIEMPPETACRALQNALDRA  224 (259)
T ss_dssp             ---------------C-TTTT-EECBCHHHHHHHHHHHHHTT
T ss_pred             Cccccch----HHHHH-HhcC-CCCCCHHHHHHHHHHHHhCC
Confidence            6443221    11111 1111 13468999999999998754

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.36  E-value=1.5e-11  Score=103.27  Aligned_cols=207  Identities=12%  Similarity=0.052  Sum_probs=134.3

Q ss_pred             HHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHH
Q 025124            7 VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM   86 (257)
Q Consensus         7 ~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l   86 (257)
                      +++.+.........++.++.+|++|.++++.++...     .+|+++|.|+......    ..++.+..+++|+.|+.++
T Consensus        42 ~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~v~h~aa~~~~~~----~~~~~~~~~~~Nv~gt~nl  112 (357)
T d1db3a_          42 RVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV-----QPDEVYNLGAMSHVAV----SFESPEYTADVDAMGTLRL  112 (357)
T ss_dssp             -------------CCEEECCCCSSCHHHHHHHHHHH-----CCSEEEECCCCCTTTT----TTSCHHHHHHHHTHHHHHH
T ss_pred             hHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc-----CCCEEEEeecccccch----hhhCHHHHHHHHHHHHHHH
Confidence            334444443444567899999999999999998865     7899999999765432    2244566889999999999


Q ss_pred             HHHHHHHHHhcCCCCCCCCCCceEEEEccccccc-----------ccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEE
Q 025124           87 CHEALKYLKKGGRGQASSSSGGIIINISATLHYT-----------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN  155 (257)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~-----------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~  155 (257)
                      +.++...-.+.         ..++|++||...+.           +..+...|+.+|.+.+.+++.++..+    ++.+.
T Consensus       113 lea~~~~~~~~---------~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK~~~E~~~~~~~~~~----~l~~~  179 (357)
T d1db3a_         113 LEAIRFLGLEK---------KTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESY----GMYAC  179 (357)
T ss_dssp             HHHHHHTTCTT---------TCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEE
T ss_pred             HHHHHHhCCCC---------CcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHh----CCCEE
Confidence            98875442221         45799999865431           11235679999999999999998765    58889


Q ss_pred             EEecCcccCCCCCCCCChHHHHHHhh----hhc---------cCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcc
Q 025124          156 GIAPGPIKDTAGVSKLAPEEIRSKAT----DYM---------AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW  222 (257)
Q Consensus       156 ~v~Pg~v~t~~~~~~~~~~~~~~~~~----~~~---------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~  222 (257)
                      .++|+.+..|..............+.    ...         ....+...+|++++++.++...    .|+.+++..|..
T Consensus       180 ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~~~~----~~~~yni~sg~~  255 (357)
T d1db3a_         180 NGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQE----QPEDFVIATGVQ  255 (357)
T ss_dssp             EEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSS----SCCCEEECCCCC
T ss_pred             EEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHHHHhCC----CCCeEEECCCCc
Confidence            99999998875432222222212111    111         1123678999999998888542    467788887755


Q ss_pred             cCCCCCCcHHHHHHHHHHHhcc
Q 025124          223 LSNPRDLPKEAVNQLSRAVERK  244 (257)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~  244 (257)
                      +.     ..+..+.+......+
T Consensus       256 ~s-----~~~~~~~~~~~~g~~  272 (357)
T d1db3a_         256 YS-----VRQFVEMAAAQLGIK  272 (357)
T ss_dssp             EE-----HHHHHHHHHHTTTEE
T ss_pred             ee-----hHHHHHHHHHHhCCc
Confidence            44     455666666666543

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.17  E-value=5.6e-10  Score=93.66  Aligned_cols=198  Identities=18%  Similarity=0.096  Sum_probs=133.8

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      ++.++.+|++|.+.+..+++..     .+|+|||+|+.....    ...++-...+++|+.|+.++.+.+......... 
T Consensus        51 ~~~~~~~Dl~d~~~l~~~~~~~-----~~d~VihlAa~~~~~----~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~-  120 (361)
T d1kewa_          51 RYNFEHADICDSAEITRIFEQY-----QPDAVMHLAAESHVD----RSITGPAAFIETNIVGTYALLEVARKYWSALGE-  120 (361)
T ss_dssp             TEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCCHH----HHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCH-
T ss_pred             CcEEEEccCCCHHHHHHHHHhC-----CCCEEEECccccchh----hHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhh-
Confidence            5778899999999999888754     799999999864321    122334568999999999999999877543210 


Q ss_pred             CCCCCCCceEEEEcccccccc---------------------cccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec
Q 025124          101 QASSSSGGIIINISATLHYTA---------------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP  159 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~~---------------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~P  159 (257)
                        ......++|++||...+..                     ..+...|+.+|.+.+.+++.++..+    |+.+..++|
T Consensus       121 --~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~----~i~~~~lR~  194 (361)
T d1kewa_         121 --DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY----GLPTIVTNC  194 (361)
T ss_dssp             --HHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEE
T ss_pred             --cccCceEEEEeccceeeCCCccCCccccccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh----CCCEEEEec
Confidence              0000357999999764421                     1123569999999999999998764    599999999


Q ss_pred             CcccCCCCCCCCChHHHHHHhhhhccC---------CCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCc
Q 025124          160 GPIKDTAGVSKLAPEEIRSKATDYMAA---------YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLP  230 (257)
Q Consensus       160 g~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~  230 (257)
                      +.+..|.......-..+........+.         ..++..+|+++++..++...   ..|..+++.+|....     .
T Consensus       195 ~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~a~ai~~~~~~~---~~~~~~Ni~s~~~~s-----~  266 (361)
T d1kewa_         195 SNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEG---KAGETYNIGGHNEKK-----N  266 (361)
T ss_dssp             CEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCCEEE-----H
T ss_pred             CceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHHHHHHHHHHHhcC---CCCCeEEECCCCCcc-----h
Confidence            999987543322112333333333221         12568999999999999653   236789998775443     3


Q ss_pred             HHHHHHHHHHHh
Q 025124          231 KEAVNQLSRAVE  242 (257)
Q Consensus       231 ~~~~~~~~~~~~  242 (257)
                      ...++.|.+.+.
T Consensus       267 ~~~~~~i~~~~~  278 (361)
T d1kewa_         267 LDVVFTICDLLD  278 (361)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHhHhhhhcc
Confidence            445555555443

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.09  E-value=1.3e-09  Score=90.34  Aligned_cols=198  Identities=14%  Similarity=0.029  Sum_probs=133.6

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++++|++|.+.+..+++..     ++|+|||.|+.....    ...++.+..+++|+.|+.++++++...-     
T Consensus        50 ~~~~~~~~Dl~d~~~l~~~~~~~-----~~d~ViHlAa~~~~~----~~~~~~~~~~~~Nv~gt~nlL~~~~~~~-----  115 (338)
T d1udca_          50 KHPTFVEGDIRNEALMTEILHDH-----AIDTVIHFAGLKAVG----ESVQKPLEYYDNNVNGTLRLISAMRAAN-----  115 (338)
T ss_dssp             SCCEEEECCTTCHHHHHHHHHHT-----TCSEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred             CCCEEEEeecCCHHHHHHHHhcc-----CCCEEEECCCccchh----hHHhCHHHHHHhHHHHHHHHHHHHHHhC-----
Confidence            57889999999999998888753     799999999954321    1333456789999999999998886542     


Q ss_pred             CCCCCCCCceEEEEccccccccc------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCC
Q 025124          100 GQASSSSGGIIINISATLHYTAT------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG  167 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~~~------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~  167 (257)
                             -.++|++||...+.+.            .+...|+.+|.+.+.+++....+.   .++.+..++|+.+..+..
T Consensus       116 -------v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~ilR~~~v~G~~~  185 (338)
T d1udca_         116 -------VKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQ---PDWSIALLRYFNPVGAHP  185 (338)
T ss_dssp             -------CCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHS---TTCEEEEEEECEEECCCT
T ss_pred             -------CCEEEecCcceEEccccccccccccccCCCcchHHHHHhhhhHHHHHHHhhc---cCCeEEEEeeccEEeccC
Confidence                   3468999887655321            235679999999999999888764   378888899988886533


Q ss_pred             CCCC------Ch----HHHHHHhhhh-cc---------------CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc
Q 025124          168 VSKL------AP----EEIRSKATDY-MA---------------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN  221 (257)
Q Consensus       168 ~~~~------~~----~~~~~~~~~~-~~---------------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  221 (257)
                      ....      ..    .......... .+               ...+...+|++.++..+.........+.++++.++.
T Consensus       186 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~  265 (338)
T d1udca_         186 SGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGV  265 (338)
T ss_dssp             TSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSS
T ss_pred             CCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEeehhhhccccccccccccCcceeeecCCC
Confidence            2111      00    1111111111 01               112457889998776666543444567888888876


Q ss_pred             ccCCCCCCcHHHHHHHHHHHhccCC
Q 025124          222 WLSNPRDLPKEAVNQLSRAVERKSR  246 (257)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~  246 (257)
                      .+.     ..++.+.|....+.+.+
T Consensus       266 ~~s-----i~e~~~~i~~~~g~~~~  285 (338)
T d1udca_         266 GNS-----VLDVVNAFSKACGKPVN  285 (338)
T ss_dssp             CEE-----HHHHHHHHHHHHTSCCC
T ss_pred             CCc-----HHHHHHHHHHHHCCCCc
Confidence            554     46777778777765543

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=98.91  E-value=8.2e-09  Score=84.84  Aligned_cols=192  Identities=17%  Similarity=0.105  Sum_probs=133.4

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|+++........       ..+|.++|.|+.....    ......+..+++|+.++.++++++...    + 
T Consensus        55 ~~~~~~~~d~~~~~~~~~~~-------~~~d~vi~~a~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~----~-  118 (322)
T d1r6da_          55 PRLRFVHGDIRDAGLLAREL-------RGVDAIVHFAAESHVD----RSIAGASVFTETNVQGTQTLLQCAVDA----G-  118 (322)
T ss_dssp             TTEEEEECCTTCHHHHHHHT-------TTCCEEEECCSCCCHH----HHHHCCHHHHHHHTHHHHHHHHHHHHT----T-
T ss_pred             CCeEEEEeccccchhhhccc-------cccceEEeeccccccc----ccccchHHHhhhhHHHHHHHHHHHHHc----C-
Confidence            46788999999988766443       3789999999864332    233445667889999999998887542    2 


Q ss_pred             CCCCCCCCceEEEEccccccccc-----------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCC
Q 025124          100 GQASSSSGGIIINISATLHYTAT-----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  168 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~~~-----------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~  168 (257)
                             ..++|++||...+.+.           .+...|+.+|.+.+.+++.++++.    |+++..++|+.+..|...
T Consensus       119 -------~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~lR~~~vyGp~~~  187 (322)
T d1r6da_         119 -------VGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTY----GLDVRITRCCNNYGPYQH  187 (322)
T ss_dssp             -------CCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECEEECTTCC
T ss_pred             -------CceEEEeecceeecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh----CCCEEEEEeeeEECcCCC
Confidence                   3569999998665332           234679999999999999998764    599999999999987543


Q ss_pred             CCCChHHHHHHhhhhccC---------CCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHHHH
Q 025124          169 SKLAPEEIRSKATDYMAA---------YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSR  239 (257)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~  239 (257)
                      ....-..+........+.         ..+...+|+|+++..++....   .|..+++..|..+.     ..+..+.|.+
T Consensus       188 ~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~~~s-----~~e~~~~i~~  259 (322)
T d1r6da_         188 PEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR---AGEIYHIGGGLELT-----NRELTGILLD  259 (322)
T ss_dssp             TTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC---TTCEEEECCCCEEE-----HHHHHHHHHH
T ss_pred             cCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCCC---CCCeeEEeecccch-----hHHHHHHHHH
Confidence            222112222222222111         135689999999999997543   47888888776554     4566777777


Q ss_pred             HHhccCC
Q 025124          240 AVERKSR  246 (257)
Q Consensus       240 ~~~~~~~  246 (257)
                      ....+.+
T Consensus       260 ~~~~~~~  266 (322)
T d1r6da_         260 SLGADWS  266 (322)
T ss_dssp             HHTCCGG
T ss_pred             HhCCCcc
Confidence            7765543

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=98.87  E-value=5.9e-08  Score=80.35  Aligned_cols=191  Identities=15%  Similarity=0.070  Sum_probs=124.3

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|++|.+.+..++.       ..+.++|.|+.....    ....+....+++|+.|+.+++..+...      
T Consensus        52 ~~i~~~~~Di~d~~~~~~~~~-------~~~~v~~~a~~~~~~----~~~~~~~~~~~~N~~g~~nll~~~~~~------  114 (346)
T d1oc2a_          52 DRVELVVGDIADAELVDKLAA-------KADAIVHYAAESHND----NSLNDPSPFIHTNFIGTYTLLEAARKY------  114 (346)
T ss_dssp             SSEEEEECCTTCHHHHHHHHT-------TCSEEEECCSCCCHH----HHHHCCHHHHHHHTHHHHHHHHHHHHH------
T ss_pred             CCeEEEEccCCCHHHHHHHHh-------hhhhhhhhhhccccc----chhhCcccceeeehHhHHhhhhhhccc------
Confidence            367788999999998887764       678899999865431    112333567899999999998877544      


Q ss_pred             CCCCCCCCceEEEEcccccccc-----------------------cccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEE
Q 025124          100 GQASSSSGGIIINISATLHYTA-----------------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG  156 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~~-----------------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~  156 (257)
                             +.+++++||...+..                       ..+...|+.+|.+.+.+++.+..+.    |+++..
T Consensus       115 -------~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~----~i~~~i  183 (346)
T d1oc2a_         115 -------DIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF----GVKATI  183 (346)
T ss_dssp             -------TCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEE
T ss_pred             -------cccccccccceEecccCccccccccccCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc----CCCEEE
Confidence                   345788877654321                       1123569999999999999888764    699999


Q ss_pred             EecCcccCCCCCCCCChHHHHHHhhhh---------ccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCC
Q 025124          157 IAPGPIKDTAGVSKLAPEEIRSKATDY---------MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPR  227 (257)
Q Consensus       157 v~Pg~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~  227 (257)
                      ++|+.+..|.......-..........         .....++..+|++++++.++...   ..|..+.+.+|....   
T Consensus       184 lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~~~~---~~~~~~~~~~~~~~~---  257 (346)
T d1oc2a_         184 SNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKG---RMGETYLIGADGEKN---  257 (346)
T ss_dssp             EEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHHC---CTTCEEEECCSCEEE---
T ss_pred             EeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHHHhhc---ccCcccccccccccc---
Confidence            999999876432221112221111111         11224678899999998887643   235566666554333   


Q ss_pred             CCcHHHHHHHHHHHhccCC
Q 025124          228 DLPKEAVNQLSRAVERKSR  246 (257)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~  246 (257)
                        .....+.|.+...++..
T Consensus       258 --~~~~~~~i~~~~~~~~~  274 (346)
T d1oc2a_         258 --NKEVLELILEKMGQPKD  274 (346)
T ss_dssp             --HHHHHHHHHHHTTCCTT
T ss_pred             --chHHHHHHHHHhCCCCc
Confidence              34566666666655443

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=98.87  E-value=7.5e-08  Score=79.47  Aligned_cols=197  Identities=15%  Similarity=0.051  Sum_probs=129.2

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|+++.+++.+.+.      .++|+|||+|+.....    ...++-...+.+|+.|+.++++.+...      
T Consensus        45 ~~~~~i~~Di~~~~~~~~~~~------~~~d~Vih~a~~~~~~----~~~~~~~~~~~~nv~gt~~ll~~~~~~------  108 (342)
T d2blla1          45 PHFHFVEGDISIHSEWIEYHV------KKCDVVLPLVAIATPI----EYTRNPLRVFELDFEENLRIIRYCVKY------  108 (342)
T ss_dssp             TTEEEEECCTTTCSHHHHHHH------HHCSEEEECBCCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHT------
T ss_pred             CCeEEEECccCChHHHHHHHH------hCCCcccccccccccc----ccccCCccccccccccccccccccccc------
Confidence            357788999998777654332      1589999999965431    123334568999999999999987543      


Q ss_pred             CCCCCCCCceEEEEccccccccc------------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124          100 GQASSSSGGIIINISATLHYTAT------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~~~------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                             +-+++++||...+.+.                  .+...|+.+|.+.+.+++.+...+    |+.+..++|+.
T Consensus       109 -------~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~i~r~~~  177 (342)
T d2blla1         109 -------RKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE----GLQFTLFRPFN  177 (342)
T ss_dssp             -------TCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECS
T ss_pred             -------cccccccccccccccccccccccccccccccccCCCcchhhhcccchhhhhhhhhccc----CceeEEeeccc
Confidence                   3446777766543221                  134579999999999999998765    58888888888


Q ss_pred             ccCCCCCCCCC--------hHHHHHHhhhh---------ccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCc-cc
Q 025124          162 IKDTAGVSKLA--------PEEIRSKATDY---------MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN-WL  223 (257)
Q Consensus       162 v~t~~~~~~~~--------~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~-~~  223 (257)
                      +..+.......        ...+.......         .....+...+|+++++..++........|+.+++.+|. .+
T Consensus       178 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~~~~~  257 (342)
T d2blla1         178 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEA  257 (342)
T ss_dssp             EECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEE
T ss_pred             cccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceeeeehhhccccCCCeEEEEecccchh
Confidence            87664332211        11121221111         11223778999999999999765445568899986542 22


Q ss_pred             CCCCCCcHHHHHHHHHHHhccCCCC
Q 025124          224 SNPRDLPKEAVNQLSRAVERKSRDS  248 (257)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~  248 (257)
                      .     ..++.+.|.+...++....
T Consensus       258 t-----~~~l~~~i~~~~~~~~~~~  277 (342)
T d2blla1         258 S-----IEELGEMLLASFEKHPLRH  277 (342)
T ss_dssp             E-----HHHHHHHHHHHHHTCTTGG
T ss_pred             H-----HHHHHHHHHHHhCCCcccc
Confidence            2     4567777777776655443

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.86  E-value=1.2e-07  Score=79.71  Aligned_cols=167  Identities=10%  Similarity=0.026  Sum_probs=113.3

Q ss_pred             CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Q 025124           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (257)
Q Consensus        19 ~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (257)
                      +.++.++.+|++|.+.++.+++..     ++|+|+|.|+..... ....+.+.....+.+|+.|+.++..++...-.   
T Consensus        66 ~~~i~~~~~Dl~d~~~l~~~~~~~-----~~d~ViHlAa~~~~~-~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~---  136 (393)
T d1i24a_          66 GKSIELYVGDICDFEFLAESFKSF-----EPDSVVHFGEQRSAP-YSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGE---  136 (393)
T ss_dssp             CCCCEEEESCTTSHHHHHHHHHHH-----CCSEEEECCSCCCHH-HHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCT---
T ss_pred             CCCcEEEEccCCCHHHHHHHHHhh-----cchheeccccccccc-cccccccccccccccccccccHHHHHHHHhcc---
Confidence            467999999999999999998865     799999999864321 11234566667889999999999998765422   


Q ss_pred             CCCCCCCCCceEEEEcccccccc------------------------cccchhhHHHHHHHHHHHHHHHHHhcCCCCeEE
Q 025124           99 RGQASSSSGGIIINISATLHYTA------------------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRV  154 (257)
Q Consensus        99 ~~~~~~~~~g~ii~iss~~~~~~------------------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v  154 (257)
                              ...+++.||......                        ..+...|+.+|.+.+.+++.+..++    ++++
T Consensus       137 --------~~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~----~l~~  204 (393)
T d1i24a_         137 --------ECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW----GIRA  204 (393)
T ss_dssp             --------TCEEEEECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEE
T ss_pred             --------ccceeeccccccccccccccccccccccccccccccccccccccHHHHHhhhhccccccccccc----ceee
Confidence                    234666776544311                        1123469999999999999888765    5899


Q ss_pred             EEEecCcccCCCCCCCC---------------C--hHHHHHHhhhhcc---------CCCCCCHHhHHHHHHHhccCC
Q 025124          155 NGIAPGPIKDTAGVSKL---------------A--PEEIRSKATDYMA---------AYKFGEKWDIAMAALYLASDA  206 (257)
Q Consensus       155 ~~v~Pg~v~t~~~~~~~---------------~--~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~  206 (257)
                      ..++|+.+..+......               .  -..+........+         ...+...+|+++++..++...
T Consensus       205 ~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~  282 (393)
T d1i24a_         205 TDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANP  282 (393)
T ss_dssp             EEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSC
T ss_pred             eecccccccCCCccccccccccccccccccccccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhh
Confidence            99999888865321110               0  0112222222211         123567899999999998643

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=4.2e-08  Score=81.08  Aligned_cols=165  Identities=13%  Similarity=0.040  Sum_probs=112.8

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|++|.+.+..++...     .+++++|.++.....    ...+.....+++|+.|+.++..++.......  
T Consensus        56 ~~~~~~~~Dl~d~~~~~~~~~~~-----~~~~v~~~~a~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~--  124 (347)
T d1t2aa_          56 GNMKLHYGDLTDSTCLVKIINEV-----KPTEIYNLGAQSHVK----ISFDLAEYTADVDGVGTLRLLDAVKTCGLIN--  124 (347)
T ss_dssp             -CEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHTTCTT--
T ss_pred             CCcEEEEeecCCchhhHHHHhhc-----ccceeeeeeeccccc----hhhccchhhhhhHHHHHHHHHHHHHHcCCCC--
Confidence            35788999999999999998865     788999998854321    2334455678999999999998876543221  


Q ss_pred             CCCCCCCCceEEEEcccccccc-----------cccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCC
Q 025124          100 GQASSSSGGIIINISATLHYTA-----------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  168 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~~-----------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~  168 (257)
                             ..++|++||.+.+..           ..+...|+.+|.+.+.+++.+...+    ++.+..++|+.+..|...
T Consensus       125 -------~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg~sK~~aE~~~~~~~~~~----~~~~~ilr~~~vyGp~~~  193 (347)
T d1t2aa_         125 -------SVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY----NLFAVNGILFNHESPRRG  193 (347)
T ss_dssp             -------TCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCEECTTSC
T ss_pred             -------CcEEEEecchheecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh----CCCEEEEEecceeCCCCC
Confidence                   357999998754311           1234579999999999999988764    588888999888876433


Q ss_pred             CCCChHHHH----HHhhhhc---------cCCCCCCHHhHHHHHHHhccCC
Q 025124          169 SKLAPEEIR----SKATDYM---------AAYKFGEKWDIAMAALYLASDA  206 (257)
Q Consensus       169 ~~~~~~~~~----~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~  206 (257)
                      .........    .......         ....+.+.+|+++++..++...
T Consensus       194 ~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~~~~~~~~  244 (347)
T d1t2aa_         194 ANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQND  244 (347)
T ss_dssp             TTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSS
T ss_pred             CCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHHHHHhhcC
Confidence            222222211    1111111         1123678999999999988653

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=98.81  E-value=5.4e-08  Score=80.51  Aligned_cols=205  Identities=12%  Similarity=0.001  Sum_probs=126.0

Q ss_pred             CCcHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHH
Q 025124            2 GRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID   79 (257)
Q Consensus         2 ~r~~~~l~~~~~~l~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   79 (257)
                      .|+.++...+.......  ......+..|++|.+++..++.       .+|+++|+++....    ..+   ....+.+|
T Consensus        42 vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~~~v~~~a~~~~~----~~~---~~~~~~~n  107 (342)
T d1y1pa1          42 ARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-------GAAGVAHIASVVSF----SNK---YDEVVTPA  107 (342)
T ss_dssp             ESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-------TCSEEEECCCCCSC----CSC---HHHHHHHH
T ss_pred             eCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc-------cchhhhhhcccccc----ccc---ccccccch
Confidence            46666665554443322  2234457789999988776653       68999999996432    122   24567789


Q ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccc-------------------------------cccchhh
Q 025124           80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-------------------------------TWYQIHV  128 (257)
Q Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~-------------------------------~~~~~~Y  128 (257)
                      +.|+.++.+.+...   ..        -.++|++||..+...                               ......|
T Consensus       108 v~gt~~ll~~~~~~---~~--------v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y  176 (342)
T d1y1pa1         108 IGGTLNALRAAAAT---PS--------VKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVY  176 (342)
T ss_dssp             HHHHHHHHHHHHTC---TT--------CCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHH
T ss_pred             hhhHHHHHHhhhcc---cc--------cccccccccceeeccCCCCCCCccccccccccccccccccccccCCCCCcCcc
Confidence            99988888876542   11        367999999754321                               1123469


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCCh---HHHHHHhhh--------hccCCCCCCHHhHHH
Q 025124          129 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP---EEIRSKATD--------YMAAYKFGEKWDIAM  197 (257)
Q Consensus       129 ~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~~~--------~~~~~~~~~~~dva~  197 (257)
                      +.+|.+.+.+++.+.++.  ..++++..++|+.+..|........   .........        ......+.+++|+|+
T Consensus       177 ~~sK~~~E~~~~~~~~~~--~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~v~v~Dva~  254 (342)
T d1y1pa1         177 AASKTEAELAAWKFMDEN--KPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAVDIGL  254 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHH--CCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEEEEHHHHHH
T ss_pred             cchhHhHHHHHHHhhhhc--ccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcccCCccceeeeeHHHHHH
Confidence            999999999999998886  3478888999988876543222211   111111111        111223578899999


Q ss_pred             HHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHHHHHH
Q 025124          198 AALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAV  241 (257)
Q Consensus       198 ~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~~~  241 (257)
                      +++..+...  ...|..+...++ ..     -+....+.|.+.+
T Consensus       255 ~~i~~l~~~--~~~g~~~~~~~~-~~-----t~~eia~~i~k~~  290 (342)
T d1y1pa1         255 LHLGCLVLP--QIERRRVYGTAG-TF-----DWNTVLATFRKLY  290 (342)
T ss_dssp             HHHHHHHCT--TCCSCEEEECCE-EE-----CHHHHHHHHHHHC
T ss_pred             HHHHhhcCc--cccceEEEEcCC-ce-----EHHHHHHHHHHHc
Confidence            988777542  235655544443 22     2355666666554

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=8.3e-08  Score=78.39  Aligned_cols=170  Identities=11%  Similarity=-0.020  Sum_probs=115.7

Q ss_pred             CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccc-----
Q 025124           47 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-----  121 (257)
Q Consensus        47 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~-----  121 (257)
                      .++|+|||.|+......    ..++....+++|+.++.++++++...             ..++|++||...+..     
T Consensus        64 ~~~d~VihlAa~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~~~~~-------------~~k~I~~SS~~vy~~~~~~~  126 (312)
T d2b69a1          64 IEVDQIYHLASPASPPN----YMYNPIKTLKTNTIGTLNMLGLAKRV-------------GARLLLASTSEVYGDPEVHP  126 (312)
T ss_dssp             CCCSEEEECCSCCSHHH----HTTCHHHHHHHHHHHHHHHHHHHHHH-------------TCEEEEEEEGGGGBSCSSSS
T ss_pred             cCCCEEEECcccCCchh----HHhCHHHHHHHHHHHHHHHHHHHHHc-------------CCcEEEEEChheecCCCCCC
Confidence            36999999999654221    11234567899999999999887543             246999998654421     


Q ss_pred             -----------cccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCCh--HHHHHHhhhhcc---
Q 025124          122 -----------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP--EEIRSKATDYMA---  185 (257)
Q Consensus       122 -----------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~---  185 (257)
                                 ..+...|+.+|.+.+.+++..+.++    |+++..++|+.+..|........  ..+........+   
T Consensus       127 ~~e~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i  202 (312)
T d2b69a1         127 QSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE----GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTV  202 (312)
T ss_dssp             BCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEE
T ss_pred             CCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHh----CCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEE
Confidence                       1235679999999999999998765    58999999999998754433211  122222222211   


Q ss_pred             ------CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHHHHHHhccCC
Q 025124          186 ------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKSR  246 (257)
Q Consensus       186 ------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (257)
                            ...++..+|++++++.++...    .+..+++.+|..+.     ..+....|...+..+.+
T Consensus       203 ~~~g~~~r~~i~v~D~~~~~~~~~~~~----~~~~~n~~~~~~~~-----~~~~~~~i~~~~~~~~~  260 (312)
T d2b69a1         203 YGSGSQTRAFQYVSDLVNGLVALMNSN----VSSPVNLGNPEEHT-----ILEFAQLIKNLVGSGSE  260 (312)
T ss_dssp             ESSSCCEEECEEHHHHHHHHHHHHTSS----CCSCEEESCCCEEE-----HHHHHHHHHHHHTCCCC
T ss_pred             eCCCCeeEccEEHHHHHHHHHHHHhhc----cCCceEecCCcccc-----hhhHHHHHHHHhCCCCc
Confidence                  124678899999999988543    34568888776665     56777788877776543

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=7.5e-08  Score=79.64  Aligned_cols=198  Identities=12%  Similarity=0.005  Sum_probs=132.1

Q ss_pred             CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Q 025124           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (257)
Q Consensus        19 ~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (257)
                      ..++.++.+|++|.+.+..++..     ..+++++|.|+.....    ...++....+++|+.++.++..++...    +
T Consensus        57 ~~~~~~~~~Dl~d~~~l~~~~~~-----~~~~~i~h~Aa~~~~~----~~~~~p~~~~~~Nv~gt~~l~~~~~~~----~  123 (346)
T d1ek6a_          57 GRSVEFEEMDILDQGALQRLFKK-----YSFMAVIHFAGLKAVG----ESVQKPLDYYRVNLTGTIQLLEIMKAH----G  123 (346)
T ss_dssp             TCCCEEEECCTTCHHHHHHHHHH-----CCEEEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHHT----T
T ss_pred             CCCcEEEEeeccccccccccccc-----cccccccccccccCcH----hhHhCHHHHHHhhhcccccccchhhhc----C
Confidence            45788999999999999888764     3788999999965421    223344567899999999888876432    2


Q ss_pred             CCCCCCCCCceEEEEccccccccc------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCC
Q 025124           99 RGQASSSSGGIIINISATLHYTAT------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA  166 (257)
Q Consensus        99 ~~~~~~~~~g~ii~iss~~~~~~~------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~  166 (257)
                              -.+++++||.......            .....|+.+|.+.+..++.++..   ..++....++|+.+..+.
T Consensus       124 --------v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~---~~~~~~~~lR~~~v~G~~  192 (346)
T d1ek6a_         124 --------VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQA---DKTWNAVLLRYFNPTGAH  192 (346)
T ss_dssp             --------CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHH---CTTCEEEEEEECEEECCC
T ss_pred             --------cccccccccceeeeccccccccccccccccCChHHHHHHHHHHHHHHHHHh---ccCCceEEEeecceeccC
Confidence                    3468888877644321            23446999999999999888764   347888888888877653


Q ss_pred             CCCC------CCh----HHHHHHhh-hhc---------------cCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCC
Q 025124          167 GVSK------LAP----EEIRSKAT-DYM---------------AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG  220 (257)
Q Consensus       167 ~~~~------~~~----~~~~~~~~-~~~---------------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg  220 (257)
                      ....      ...    ........ ...               ....+...+|++.++..++........++.+++.+|
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~  272 (346)
T d1ek6a_         193 ASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTG  272 (346)
T ss_dssp             TTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCS
T ss_pred             CCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCC
Confidence            2110      001    11111111 111               012367899999998887654444456788988887


Q ss_pred             cccCCCCCCcHHHHHHHHHHHhccC
Q 025124          221 NWLSNPRDLPKEAVNQLSRAVERKS  245 (257)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~  245 (257)
                      ..+.     ..++.+.|.+....+.
T Consensus       273 ~~~s-----~~dl~~~i~~~~~~~~  292 (346)
T d1ek6a_         273 TGYS-----VLQMVQAMEKASGKKI  292 (346)
T ss_dssp             CCEE-----HHHHHHHHHHHHCSCC
T ss_pred             Cccc-----HHHHHHHHHHHhCCCC
Confidence            5544     4677888888877654

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.74  E-value=3.7e-07  Score=75.46  Aligned_cols=123  Identities=14%  Similarity=-0.008  Sum_probs=92.0

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|++|.++++.++...     ++|+|||.|+.....    ...+.-.....+|+.++.++.+++...    + 
T Consensus        51 ~~v~~~~~Dl~d~~~l~~~~~~~-----~~d~VihlAa~~~~~----~~~~~~~~~~~~N~~~t~~ll~~~~~~----~-  116 (347)
T d1z45a2          51 HHIPFYEVDLCDRKGLEKVFKEY-----KIDSVIHFAGLKAVG----ESTQIPLRYYHNNILGTVVLLELMQQY----N-  116 (347)
T ss_dssp             SCCCEEECCTTCHHHHHHHHHHS-----CCCEEEECCSCCCHH----HHHHSHHHHHHHHHHHHHHHHHHHHHH----T-
T ss_pred             cCCeEEEeecCCHHHHHHHHhcc-----CCCEEEEcccccccc----ccccCcccccccchhhhHHHHHHHHhc----c-
Confidence            46788999999999999888753     799999999965321    122333567889999999999988653    1 


Q ss_pred             CCCCCCCCceEEEEcccccccc---------------cccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccC
Q 025124          100 GQASSSSGGIIINISATLHYTA---------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD  164 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~~---------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t  164 (257)
                             -.++|++||...+..               ..+...|+.+|.+.+.+++.+....  ..++++..++|+.+..
T Consensus       117 -------i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~~lR~~~v~g  187 (347)
T d1z45a2         117 -------VSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSD--KKSWKFAILRYFNPIG  187 (347)
T ss_dssp             -------CCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS--TTSCEEEEEEECEEEC
T ss_pred             -------cceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHHHHHHHHHHHHHhh--ccCCcEEEEeecceEe
Confidence                   346999999765421               1134579999999999999988764  5678888888877764


Q ss_pred             C
Q 025124          165 T  165 (257)
Q Consensus       165 ~  165 (257)
                      +
T Consensus       188 ~  188 (347)
T d1z45a2         188 A  188 (347)
T ss_dssp             C
T ss_pred             e
Confidence            3

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=98.72  E-value=2.6e-07  Score=77.44  Aligned_cols=197  Identities=15%  Similarity=0.035  Sum_probs=129.6

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|++|.+.++++++.    ..++|+|+|.|+.....    ...+.....+++|+.++..+..++...    + 
T Consensus        69 ~~~~~~~~Di~d~~~l~~~~~~----~~~~d~ViH~Aa~~~~~----~~~~~~~~~~~~N~~~t~~~l~~~~~~----~-  135 (383)
T d1gy8a_          69 RYAALEVGDVRNEDFLNGVFTR----HGPIDAVVHMCAFLAVG----ESVRDPLKYYDNNVVGILRLLQAMLLH----K-  135 (383)
T ss_dssp             CCCEEEESCTTCHHHHHHHHHH----SCCCCEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHHT----T-
T ss_pred             cceEEEECcccCHHHhhhhhhc----cceeehhhccccccccc----ccccccccccccccccccccchhhhcc----C-
Confidence            3578899999999998888764    46799999999965432    123344567889999999988887643    2 


Q ss_pred             CCCCCCCCceEEEEccccccc------------------ccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCc
Q 025124          100 GQASSSSGGIIINISATLHYT------------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP  161 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~------------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~  161 (257)
                             ..+++++++.....                  ...+...|+.+|.+.+.+++.+...+    |+.+..++|+.
T Consensus       136 -------~~~~~~~~s~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~----gl~~~~lR~~~  204 (383)
T d1gy8a_         136 -------CDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY----GIKGICLRYFN  204 (383)
T ss_dssp             -------CCEEEEEEEGGGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECE
T ss_pred             -------CcccccccccccccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh----CCCEEEEecce
Confidence                   34577776654332                  11235679999999999999988754    58999999998


Q ss_pred             ccCCCCCCCCCh---------HHHHHHhh-h------------------------------hccCCCCCCHHhHHHHHHH
Q 025124          162 IKDTAGVSKLAP---------EEIRSKAT-D------------------------------YMAAYKFGEKWDIAMAALY  201 (257)
Q Consensus       162 v~t~~~~~~~~~---------~~~~~~~~-~------------------------------~~~~~~~~~~~dva~~~~~  201 (257)
                      +..|........         ........ .                              ......+...+|++++++.
T Consensus       205 vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~  284 (383)
T d1gy8a_         205 ACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHIL  284 (383)
T ss_dssp             EECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHH
T ss_pred             eeccCccccccccccccchhHHHHHHHHHhhccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHH
Confidence            887654332210         00101000 0                              0111235678999999988


Q ss_pred             hccC------CCCcccCcEEEecCCcccCCCCCCcHHHHHHHHHHHhccC
Q 025124          202 LASD------AGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKS  245 (257)
Q Consensus       202 l~~~------~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~~~~~~~  245 (257)
                      ++..      ......++.+++.+|..+.     ...+.+.|.+....+.
T Consensus       285 ~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s-----~~el~~~i~~~~~~~~  329 (383)
T d1gy8a_         285 ALDYVEKLGPNDKSKYFSVFNLGTSRGYS-----VREVIEVARKTTGHPI  329 (383)
T ss_dssp             HHHHHHTCCTTTGGGSEEEEEESCSCCEE-----HHHHHHHHHHHHCCCC
T ss_pred             HHhhhccccccccccCccEEEeCCCCcee-----HHHHHHHHHHHhCCCC
Confidence            8752      1223457888998875443     4566777777665543

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.69  E-value=2.3e-07  Score=76.44  Aligned_cols=196  Identities=13%  Similarity=-0.009  Sum_probs=132.0

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|+.|........       ...+.++|.++.....    ...++....+++|+.|+.++.+++...    + 
T Consensus        70 ~~~~~~~~d~~d~~~~~~~~-------~~~~~v~~~~a~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~~----~-  133 (341)
T d1sb8a_          70 SNFKFIQGDIRNLDDCNNAC-------AGVDYVLHQAALGSVP----RSINDPITSNATNIDGFLNMLIAARDA----K-  133 (341)
T ss_dssp             TTEEEEECCTTSHHHHHHHH-------TTCSEEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHHT----T-
T ss_pred             CCeeEEeecccccccccccc-------cccccccccccccccc----ccccCccchhheeehhHHHHHHHHHhc----C-
Confidence            35677888998888755443       3678888888754321    134566778999999999999887643    2 


Q ss_pred             CCCCCCCCceEEEEcccccccc-----------cccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCC
Q 025124          100 GQASSSSGGIIINISATLHYTA-----------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  168 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~~-----------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~  168 (257)
                             -.++|++||...+..           ..+...|+.+|.+.+.+++.++...    ++++..++|+.+..+...
T Consensus       134 -------~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~i~~~ilR~~~v~G~~~~  202 (341)
T d1sb8a_         134 -------VQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY----GFSTIGLRYFNVFGRRQD  202 (341)
T ss_dssp             -------CSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCCEEEEECCEECTTCC
T ss_pred             -------CceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHHHHHHHHHHHHHHHh----CCCeEEEEeceeeccCcC
Confidence                   357999999875432           1234689999999999999998764    588899999988876543


Q ss_pred             CCCCh----HHHHHHhhhhcc---------CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHH
Q 025124          169 SKLAP----EEIRSKATDYMA---------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVN  235 (257)
Q Consensus       169 ~~~~~----~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~  235 (257)
                      .....    ...........+         ...+...+|++.++..++..... ..|..+.+..+..+.     ..++..
T Consensus       203 ~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~~-~~~~~~~~~~~~~~s-----i~~i~~  276 (341)
T d1sb8a_         203 PNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLD-ARNQVYNIAVGGRTS-----LNQLFF  276 (341)
T ss_dssp             CCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGG-GCSEEEEESCSCCEE-----HHHHHH
T ss_pred             CCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhhhhhcccc-ccceeeeecccccch-----HHHHHH
Confidence            22211    122222222211         22467889999999888864433 457788887654443     466777


Q ss_pred             HHHHHHhccCCCC
Q 025124          236 QLSRAVERKSRDS  248 (257)
Q Consensus       236 ~~~~~~~~~~~~~  248 (257)
                      .|.+...++....
T Consensus       277 ~i~~~~~~~~~~~  289 (341)
T d1sb8a_         277 ALRDGLAENGVSY  289 (341)
T ss_dssp             HHHHHHHHTTCCC
T ss_pred             HHHHHhccccccc
Confidence            7877777665433

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=98.67  E-value=1.5e-07  Score=76.56  Aligned_cols=174  Identities=13%  Similarity=-0.003  Sum_probs=115.4

Q ss_pred             HHHHHHHHHhcCCCeEEE----EccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHH
Q 025124            8 LRSAVAALHSLGIPAIGL----EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT   83 (257)
Q Consensus         8 l~~~~~~l~~~~~~~~~~----~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~   83 (257)
                      ...+++.|.+.|..+..+    .+|+.+.+.+..++..-     .+|.++|.|+......   ....+....+++|+.++
T Consensus        15 G~~l~~~L~~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~-----~~d~v~~~a~~~~~~~---~~~~~~~~~~~~Nv~gt   86 (315)
T d1e6ua_          15 GSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASE-----RIDQVYLAAAKVGGIV---ANNTYPADFIYQNMMIE   86 (315)
T ss_dssp             HHHHHHHHTTCTTEEEECCCTTTCCTTCHHHHHHHHHHH-----CCSEEEECCCCCCCHH---HHHHCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCcCEEEEecCchhccccCHHHHHHHHhhc-----CCCEEEEcchhccccc---cchhhHHHHHHHHHHHH
Confidence            345677777766544333    57888898888877632     7999999997543211   12334456788999999


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccccc----------------ccchhhHHHHHHHHHHHHHHHHHhc
Q 025124           84 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----------------WYQIHVSAAKAAVDSITRSLALEWG  147 (257)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~----------------~~~~~Y~~sK~a~~~l~~~la~e~~  147 (257)
                      .++++++...    +        -.++|++||...+.+.                +....|+.+|.+.+.+++.+..+. 
T Consensus        87 ~~ll~~a~~~----~--------v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-  153 (315)
T d1e6ua_          87 SNIIHAAHQN----D--------VNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY-  153 (315)
T ss_dssp             HHHHHHHHHT----T--------CCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHc----C--------CCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh-
Confidence            9998887553    2        3469999998765321                123469999999999999998765 


Q ss_pred             CCCCeEEEEEecCcccCCCCCCCCCh----H-HHHHHhh-------------hhccCCCCCCHHhHHHHHHHhccC
Q 025124          148 TDYAIRVNGIAPGPIKDTAGVSKLAP----E-EIRSKAT-------------DYMAAYKFGEKWDIAMAALYLASD  205 (257)
Q Consensus       148 ~~~gi~v~~v~Pg~v~t~~~~~~~~~----~-~~~~~~~-------------~~~~~~~~~~~~dva~~~~~l~~~  205 (257)
                         |+++..++|+.+..|........    . .......             +..+...+...+|++.++..++..
T Consensus       154 ---gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~~~~~~  226 (315)
T d1e6ua_         154 ---GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMEL  226 (315)
T ss_dssp             ---CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHS
T ss_pred             ---CCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHHHhhhh
Confidence               59999999999987754322211    1 1111001             011223456789999999888853

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.66  E-value=3.3e-07  Score=76.10  Aligned_cols=187  Identities=17%  Similarity=0.062  Sum_probs=123.5

Q ss_pred             EEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCC
Q 025124           23 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQA  102 (257)
Q Consensus        23 ~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~  102 (257)
                      .+..+|+.+.+.+..+++       ++|.+||.|+......   ...+.....+.+|+.++.+++.++...    +    
T Consensus        61 ~~~~~D~~~~~~~~~~~~-------~~d~Vih~a~~~~~~~---~~~~~~~~~~~~n~~gt~~ll~~~~~~----~----  122 (363)
T d2c5aa1          61 EFHLVDLRVMENCLKVTE-------GVDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMIEAARIN----G----  122 (363)
T ss_dssp             EEEECCTTSHHHHHHHHT-------TCSEEEECCCCCCCHH---HHTTCHHHHHHHHHHHHHHHHHHHHHT----T----
T ss_pred             cEEEeechhHHHHHHHhh-------cCCeEeeccccccccc---ccccccccccccccchhhHHHHhHHhh----C----
Confidence            455678887777655443       7899999998654321   112344567888999998888887653    2    


Q ss_pred             CCCCCceEEEEccccccccc------------------ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccC
Q 025124          103 SSSSGGIIINISATLHYTAT------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD  164 (257)
Q Consensus       103 ~~~~~g~ii~iss~~~~~~~------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t  164 (257)
                          -.++|++||.......                  .+...|+.+|.+.+.+++.+..++    |+++..++|+.+..
T Consensus       123 ----vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~----gl~~~ilR~~~vyG  194 (363)
T d2c5aa1         123 ----IKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF----GIECRIGRFHNIYG  194 (363)
T ss_dssp             ----CSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCEEC
T ss_pred             ----ccccccccccccccccccccccccccccccCCcCCCCCHHHHHHHHHHHHHHHHHHHh----CCCEEEEEeeeEec
Confidence                3569999997654321                  124579999999999999988765    58999999999987


Q ss_pred             CCCCCCCCh-----HHHHHHhhhh---------ccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCc
Q 025124          165 TAGVSKLAP-----EEIRSKATDY---------MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLP  230 (257)
Q Consensus       165 ~~~~~~~~~-----~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~  230 (257)
                      +........     ..........         .....+...+|++++++.++...    .|..+++.+|..+.     .
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~~~~----~~~~~ni~~~~~~s-----~  265 (363)
T d2c5aa1         195 PFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS-----M  265 (363)
T ss_dssp             TTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS----CCSCEEECCCCCEE-----H
T ss_pred             cCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHHHHHhCC----CCCeEEEecCCccc-----H
Confidence            643222111     1111111111         11234778999999999988643    46678888876554     5


Q ss_pred             HHHHHHHHHHHhcc
Q 025124          231 KEAVNQLSRAVERK  244 (257)
Q Consensus       231 ~~~~~~~~~~~~~~  244 (257)
                      .++++.+.+...++
T Consensus       266 ~~l~~~i~~~~g~~  279 (363)
T d2c5aa1         266 NEMAEMVLSFEEKK  279 (363)
T ss_dssp             HHHHHHHHHTTTCC
T ss_pred             HHHHHHHHHHhCCC
Confidence            66666666665544

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=98.64  E-value=3.8e-07  Score=74.60  Aligned_cols=197  Identities=15%  Similarity=0.066  Sum_probs=119.6

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|++|.+++..+++..     ++|+|||+|+.....    ...++-+..+++|+.|+.++++++...    + 
T Consensus        49 ~~~~~i~~Di~~~~~l~~~~~~~-----~~d~Vih~aa~~~~~----~~~~~~~~~~~~Nv~gt~nll~~~~~~----~-  114 (338)
T d1orra_          49 GNFEFVHGDIRNKNDVTRLITKY-----MPDSCFHLAGQVAMT----TSIDNPCMDFEINVGGTLNLLEAVRQY----N-  114 (338)
T ss_dssp             CCCEEEECCTTCHHHHHHHHHHH-----CCSEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHHH----C-
T ss_pred             CCcEEEEcccCCHHHHHHHHHhc-----CCceEEeeccccccc----ccccChHHHHHHHHHHHHHHHHhhhcc----c-
Confidence            56888999999999999888765     789999999865331    123344678999999999999877553    2 


Q ss_pred             CCCCCCCCceEEEEccccccccc----------------------------ccchhhHHHHHHHHHHHHHHHHHhcCCCC
Q 025124          100 GQASSSSGGIIINISATLHYTAT----------------------------WYQIHVSAAKAAVDSITRSLALEWGTDYA  151 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~~~----------------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~g  151 (257)
                             ..+++++||.....+.                            .+...|+.+|...+.+.......+.    
T Consensus       115 -------~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~----  183 (338)
T d1orra_         115 -------SNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFG----  183 (338)
T ss_dssp             -------TTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred             -------ccccccccccccccccccccccccccccccccccccCcccCCccccccccccccchhhhhhhhhhhccC----
Confidence                   2335666655433221                            1346799999999999998888764    


Q ss_pred             eEEEEEecCcccCCCCCCCCC---hHHHHHHhhh-h-------------ccCCCCCCHHhHHHHHHHhccCCCCcccCcE
Q 025124          152 IRVNGIAPGPIKDTAGVSKLA---PEEIRSKATD-Y-------------MAAYKFGEKWDIAMAALYLASDAGKYVNGNT  214 (257)
Q Consensus       152 i~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~~~-~-------------~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~  214 (257)
                      +....+.+..+..+.......   ...+...... .             .....+...+|++++++.++... ....|+.
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~v~D~~~~~~~~l~~~-~~~~~~~  262 (338)
T d1orra_         184 LNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANV-SKIRGNA  262 (338)
T ss_dssp             CEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTH-HHHTTCE
T ss_pred             cccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEeeecccchhhHHHHHHhcc-ccccCcc
Confidence            344434433333222111111   1112111111 0             11123567899999999888543 2356888


Q ss_pred             EEecCCcccCCCCCCcHHHHHHHHHHHhccC
Q 025124          215 LIVDGGNWLSNPRDLPKEAVNQLSRAVERKS  245 (257)
Q Consensus       215 ~~~dgg~~~~~~~~~~~~~~~~~~~~~~~~~  245 (257)
                      +.+.+|..-   ..-..+....+......+.
T Consensus       263 ~~i~~~~~~---~~s~~e~~~~i~~~~~~~~  290 (338)
T d1orra_         263 FNIGGTIVN---SLSLLELFKLLEDYCNIDM  290 (338)
T ss_dssp             EEESSCGGG---EEEHHHHHHHHHHHHTCCC
T ss_pred             ccccccccc---cccHHHHHHHHHHHHCCCc
Confidence            888655211   1112345566666655443

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.63  E-value=1.9e-06  Score=70.50  Aligned_cols=166  Identities=12%  Similarity=0.019  Sum_probs=112.6

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      .+.++.+|+++.+++...++..     ++|+|||.|+.....    ...+.-...+..|+.+...+..++......... 
T Consensus        57 ~~~~~~~Di~~~~~~~~~~~~~-----~~D~Vih~Aa~~~~~----~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~-  126 (339)
T d1n7ha_          57 LMKLHYADLTDASSLRRWIDVI-----KPDEVYNLAAQSHVA----VSFEIPDYTADVVATGALRLLEAVRSHTIDSGR-  126 (339)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCC-
T ss_pred             ceEEEEccccCHHHHHHHHhhh-----ccchhhhcccccccc----ccccCccccccccccccchhhhhhhhccccccc-
Confidence            4668889999999999888764     899999999964321    123344578899999999999988776555421 


Q ss_pred             CCCCCCCceEEEEccccccc----------ccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCC
Q 025124          101 QASSSSGGIIINISATLHYT----------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK  170 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~----------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~  170 (257)
                            ..+++..||.....          +..+...|+.+|.+.+.+++.....+    ++.+..++|+.+..|.....
T Consensus       127 ------~~~~~~~ss~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilR~~~vyGp~~~~~  196 (339)
T d1n7ha_         127 ------TVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAY----GLFACNGILFNHESPRRGEN  196 (339)
T ss_dssp             ------CCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCEECTTSCTT
T ss_pred             ------ceeeeecccceecccCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHh----CCCEEEEEEccccCCCCCCC
Confidence                  33455555543221          12245689999999999999988764    59999999999987754333


Q ss_pred             CChHHHHHH----hhhhc---------cCCCCCCHHhHHHHHHHhccCC
Q 025124          171 LAPEEIRSK----ATDYM---------AAYKFGEKWDIAMAALYLASDA  206 (257)
Q Consensus       171 ~~~~~~~~~----~~~~~---------~~~~~~~~~dva~~~~~l~~~~  206 (257)
                      .........    .....         ....+...+|+++++..++...
T Consensus       197 ~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~~~~~~~~~  245 (339)
T d1n7ha_         197 FVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQE  245 (339)
T ss_dssp             SHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSS
T ss_pred             CCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHHHHHHHHhcC
Confidence            222222111    11111         1123677999999999998754

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.62  E-value=6.4e-07  Score=72.91  Aligned_cols=191  Identities=13%  Similarity=0.030  Sum_probs=121.8

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      .++.++.+|++|.+.+...+...     ..+++++.++......    ..+.....++.|+.|+.+++.++...-.    
T Consensus        49 ~~~~~~~~Dl~d~~~~~~~~~~~-----~~~~~~~~a~~~~~~~----~~~~~~~~~~~n~~g~~~~l~~~~~~~~----  115 (321)
T d1rpna_          49 GDIQYEDGDMADACSVQRAVIKA-----QPQEVYNLAAQSFVGA----SWNQPVTTGVVDGLGVTHLLEAIRQFSP----  115 (321)
T ss_dssp             GGEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCCHHH----HTTSHHHHHHHHTHHHHHHHHHHHHHCT----
T ss_pred             CCcEEEEccccChHHhhhhhccc-----cccccccccccccccc----cccchHHHHhhhhhchHHHHHHHHHhCC----
Confidence            35788999999999998888765     6788888887543221    1223467889999999999888765422    


Q ss_pred             CCCCCCCCceEEEEccccccc-----------ccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCC
Q 025124          100 GQASSSSGGIIINISATLHYT-----------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  168 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~-----------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~  168 (257)
                             ..++++.|+.....           +......|+.+|.+.+.+++.+..++    ++++..++|+.+..|...
T Consensus       116 -------~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~lr~~~vyGp~~~  184 (321)
T d1rpna_         116 -------ETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESF----GLHASSGILFNHESPLRG  184 (321)
T ss_dssp             -------TSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECCEECTTSC
T ss_pred             -------CcccccccchhhcCcccCCCCCCCCCccccChhHHHHHHHHHHHHHHHhhc----CCcEEEEEEecccCCCcc
Confidence                   23466666543221           11245689999999999999998765    488888899888876533


Q ss_pred             CCCChHHHHHH----hhhhcc---------CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHH
Q 025124          169 SKLAPEEIRSK----ATDYMA---------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVN  235 (257)
Q Consensus       169 ~~~~~~~~~~~----~~~~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~  235 (257)
                      ...........    .....+         ...+...+|+++++..++....    +..+++.++....     ......
T Consensus       185 ~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~~----~~~~ni~~~~~~s-----~~~~~~  255 (321)
T d1rpna_         185 IEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK----ADDYVVATGVTTT-----VRDMCQ  255 (321)
T ss_dssp             TTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS----CCCEEECCSCEEE-----HHHHHH
T ss_pred             ccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcCC----cCCceecccccce-----ehhhhH
Confidence            22211111111    111111         1136789999999999986532    3456666664333     344455


Q ss_pred             HHHHHHhc
Q 025124          236 QLSRAVER  243 (257)
Q Consensus       236 ~~~~~~~~  243 (257)
                      .+.+....
T Consensus       256 ~~~~~~~~  263 (321)
T d1rpna_         256 IAFEHVGL  263 (321)
T ss_dssp             HHHHTTTC
T ss_pred             HHHHHhCC
Confidence            55555443

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.50  E-value=1.8e-06  Score=65.82  Aligned_cols=153  Identities=14%  Similarity=0.116  Sum_probs=93.5

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      ..+.++.+|++|.+++.+++.       +.|++|+++|........           +++..+..++    ++.+++.+ 
T Consensus        46 ~~~~~~~gD~~d~~~l~~al~-------~~d~vi~~~g~~~~~~~~-----------~~~~~~~~~l----~~aa~~~~-  102 (205)
T d1hdoa_          46 RPAHVVVGDVLQAADVDKTVA-------GQDAVIVLLGTRNDLSPT-----------TVMSEGARNI----VAAMKAHG-  102 (205)
T ss_dssp             CCSEEEESCTTSHHHHHHHHT-------TCSEEEECCCCTTCCSCC-----------CHHHHHHHHH----HHHHHHHT-
T ss_pred             cccccccccccchhhHHHHhc-------CCCEEEEEeccCCchhhh-----------hhhHHHHHHH----HHHHHhcC-
Confidence            357889999999998877765       689999999964332211           1223333333    34455554 


Q ss_pred             CCCCCCCCceEEEEcccccccccc----cchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCChHH
Q 025124          100 GQASSSSGGIIINISATLHYTATW----YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE  175 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~~~~----~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~  175 (257)
                             -.++|++||........    ....|...|.+.+.+.       . ..|++...|+||++..........   
T Consensus       103 -------v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~e~~l-------~-~~~~~~tiirp~~~~~~~~~~~~~---  164 (205)
T d1hdoa_         103 -------VDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVL-------R-ESGLKYVAVMPPHIGDQPLTGAYT---  164 (205)
T ss_dssp             -------CCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHH-------H-HTCSEEEEECCSEEECCCCCSCCE---
T ss_pred             -------CCeEEEEeeeeccCCCccccccccccchHHHHHHHHH-------H-hcCCceEEEecceecCCCCcccEE---
Confidence                   46799999876543322    2234555555554433       2 457999999999996432211110   


Q ss_pred             HHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEec
Q 025124          176 IRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVD  218 (257)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~d  218 (257)
                         ...+......+.+.+|+|++++..+..+.  ..|+.+.+.
T Consensus       165 ---~~~~~~~~~~~i~~~DvA~~~~~~l~~~~--~~g~~~~~s  202 (205)
T d1hdoa_         165 ---VTLDGRGPSRVISKHDLGHFMLRCLTTDE--YDGHSTYPS  202 (205)
T ss_dssp             ---EESSSCSSCSEEEHHHHHHHHHHTTSCST--TTTCEEEEE
T ss_pred             ---EeeCCCCCCCcCCHHHHHHHHHHHhCCCC--CCCEEEecC
Confidence               01111222345789999999999996543  457777654

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.50  E-value=7.1e-10  Score=84.67  Aligned_cols=120  Identities=11%  Similarity=0.037  Sum_probs=81.0

Q ss_pred             CCCcHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHh
Q 025124            1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS   80 (257)
Q Consensus         1 ~~r~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   80 (257)
                      ++|+.++++++.+.+.+. .++..+.+|+++.+++++++       +++|+||||+|+.    +...+.++|+..+++|+
T Consensus        53 ~~r~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~-------~~iDilin~Ag~g----~~~~~~e~~~~~~~~nv  120 (191)
T d1luaa1          53 CGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAV-------KGAHFVFTAGAIG----LELLPQAAWQNESSIEI  120 (191)
T ss_dssp             EESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHT-------TTCSEEEECCCTT----CCCBCHHHHHTCTTCCE
T ss_pred             cccchHHHHHHHHHHHhc-cchhhhhhhcccHHHHHHHh-------cCcCeeeecCccc----cccCCHHHHHhhhccee
Confidence            479999999999998765 34566889999999887664       5899999999964    34578999999999998


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccc-cccchhhHHHHHHHHHHHHH
Q 025124           81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-TWYQIHVSAAKAAVDSITRS  141 (257)
Q Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~-~~~~~~Y~~sK~a~~~l~~~  141 (257)
                      .+.++....+.+.+...         ......+++.....+ ..+...|+.+|+++..|+++
T Consensus       121 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~g~~~~g~~~y~~sk~a~~~l~~s  173 (191)
T d1luaa1         121 VADYNAQPPLGIGGIDA---------TDKGKEYGGKRAFGALGIGGLKLKLHRACIAKLFES  173 (191)
T ss_dssp             EEECCCSSSCSBTTCCT---------TCEEEEETTEEEECHHHHHHHHHHHHHHHHHHHTSC
T ss_pred             ehhHhhHHHHHHHhhhh---------ccCcEEecceEEEeccCcCcHHHHHHHHHHHHHHhc
Confidence            77776554443222211         112223332222211 12335699999998877653

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.25  E-value=4.2e-06  Score=64.52  Aligned_cols=175  Identities=11%  Similarity=-0.027  Sum_probs=102.9

Q ss_pred             CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCC---------CCCCCCHHHHHHHHHHHhHHHHHHHHH
Q 025124           19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV---------PAEDLSPNGFRTVIEIDSVGTFIMCHE   89 (257)
Q Consensus        19 ~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~---------~~~~~~~~~~~~~~~~n~~~~~~l~~~   89 (257)
                      ..+++++.+|+++.+++.++++       ++|.+||+++.....         .........+.....+|+.+...+...
T Consensus        46 ~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (252)
T d2q46a1          46 GGEADVFIGDITDADSINPAFQ-------GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDA  118 (252)
T ss_dssp             TCCTTEEECCTTSHHHHHHHHT-------TCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHH
T ss_pred             cCCcEEEEeeeccccccccccc-------cceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccc
Confidence            3567889999999998877664       689999999854321         111112223445667788888777666


Q ss_pred             HHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHH-HHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCC
Q 025124           90 ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKA-AVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV  168 (257)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~-a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~  168 (257)
                      .....            .+...+.++.....+......+...+. ....+...+..    ..|+++..++|+.+..+...
T Consensus       119 ~~~~~------------~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ilRp~~v~g~~~~  182 (252)
T d2q46a1         119 AKVAG------------VKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLA----DSGTPYTIIRAGGLLDKEGG  182 (252)
T ss_dssp             HHHHT------------CSEEEEEEETTTTCTTCGGGGGGGCCHHHHHHHHHHHHH----HSSSCEEEEEECEEECSCTT
T ss_pred             ccccc------------ccccccccccccCCCCcccccccccchhhhhhhhhhhhh----cccccceeecceEEECCCcc
Confidence            54432            456777777665544433333322222 22222222222    44799999999999876432


Q ss_pred             CCCChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCC
Q 025124          169 SKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG  220 (257)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg  220 (257)
                      .........  .........+.+.+|+|++++.++..+.  ..|+++++.++
T Consensus       183 ~~~~~~~~~--~~~~~~~~~~i~~~Dva~a~~~~l~~~~--~~g~~~~i~~~  230 (252)
T d2q46a1         183 VRELLVGKD--DELLQTDTKTVPRADVAEVCIQALLFEE--AKNKAFDLGSK  230 (252)
T ss_dssp             SSCEEEEST--TGGGGSSCCEEEHHHHHHHHHHHTTCGG--GTTEEEEEEEC
T ss_pred             hhhhhhccC--cccccCCCCeEEHHHHHHHHHHHhCCcc--ccCcEEEEeeC
Confidence            111000000  0001112245789999999999986543  46889988764

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=98.01  E-value=7.6e-05  Score=58.79  Aligned_cols=197  Identities=12%  Similarity=0.082  Sum_probs=120.6

Q ss_pred             HHHHHHHHHhcCCCeEEE---EccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHH
Q 025124            8 LRSAVAALHSLGIPAIGL---EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF   84 (257)
Q Consensus         8 l~~~~~~l~~~~~~~~~~---~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~   84 (257)
                      ...+++.|.+.|.++..+   .+|++|.++++++++..     ++|++||+++.....    ......+..+..|+....
T Consensus        14 G~~l~~~L~~~g~~Vi~~~r~~~D~~d~~~~~~~l~~~-----~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~   84 (281)
T d1vl0a_          14 GREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEK-----KPNVVINCAAHTAVD----KCEEQYDLAYKINAIGPK   84 (281)
T ss_dssp             HHHHHHHHTTSSEEEEEECTTTCCTTCHHHHHHHHHHH-----CCSEEEECCCCCCHH----HHHHCHHHHHHHHTHHHH
T ss_pred             HHHHHHHHHhCCCEEEEeechhccCCCHHHHHHHHHHc-----CCCEEEeeccccccc----cccccchhhccccccccc
Confidence            345677777766555443   35789999998888765     789999998854321    122333556677777766


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccc-----------ccccchhhHHHHHHHHHHHHHHHHHhcCCCCeE
Q 025124           85 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-----------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIR  153 (257)
Q Consensus        85 ~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~-----------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~  153 (257)
                      .+.......             ...+++.||.....           +..+...|+.+|...+.+.+.        .+.+
T Consensus        85 ~~~~~~~~~-------------~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~~~--------~~~~  143 (281)
T d1vl0a_          85 NLAAAAYSV-------------GAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKA--------LNPK  143 (281)
T ss_dssp             HHHHHHHHH-------------TCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHH--------HCSS
T ss_pred             ccccccccc-------------cccccccccceeeeccccccccccccccchhhhhhhhhHHHHHHHH--------hCCC
Confidence            665554332             23466666543321           122445688888877665532        2456


Q ss_pred             EEEEecCcccCCCCCCCCChHHHHHHhhhhcc-------CCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCC
Q 025124          154 VNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA-------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNP  226 (257)
Q Consensus       154 v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~  226 (257)
                      ...++|+.+..+...   .............+       ...+...+|+++++..++....   +| .+.+.++..+.  
T Consensus       144 ~~i~R~~~vyG~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~---~g-~~~~~~~~~~s--  214 (281)
T d1vl0a_         144 YYIVRTAWLYGDGNN---FVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEKN---YG-TFHCTCKGICS--  214 (281)
T ss_dssp             EEEEEECSEESSSSC---HHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHTC---CE-EEECCCBSCEE--
T ss_pred             ccccceeEEeCCCcc---cccchhhhhccCCceeecCCceeccchhhhhhhhhhhhhhhcc---cC-ceeEeCCCccc--
Confidence            778999999866321   11222222222211       1246789999999999996532   34 66666665444  


Q ss_pred             CCCcHHHHHHHHHHHhccCC
Q 025124          227 RDLPKEAVNQLSRAVERKSR  246 (257)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~  246 (257)
                         ..++.+.|.+..+.+.+
T Consensus       215 ---~~e~~~~i~~~~g~~~~  231 (281)
T d1vl0a_         215 ---WYDFAVEIFRLTGIDVK  231 (281)
T ss_dssp             ---HHHHHHHHHHHHCCCCE
T ss_pred             ---hHHHHHHHHHHhCCCce
Confidence               57778888888876643

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=97.88  E-value=0.00023  Score=57.99  Aligned_cols=165  Identities=14%  Similarity=0.088  Sum_probs=107.4

Q ss_pred             CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Q 025124           21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG  100 (257)
Q Consensus        21 ~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  100 (257)
                      .+.++.+|++|++.+..++...     .+|+++|.|+....    ....+..+..+++|+.++..+.+++...-.     
T Consensus        57 ~i~~~~~Dl~d~~~l~~~~~~~-----~~~~v~~~aa~~~~----~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~-----  122 (356)
T d1rkxa_          57 GMQSEIGDIRDQNKLLESIREF-----QPEIVFHMAAQPLV----RLSYSEPVETYSTNVMGTVYLLEAIRHVGG-----  122 (356)
T ss_dssp             TSEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHHCC-----
T ss_pred             CCeEEEeeccChHhhhhhhhhc-----hhhhhhhhhccccc----cccccCCccccccccccchhhhhhhhcccc-----
Confidence            5788899999999998888765     78999999985432    122445567889999999999888865311     


Q ss_pred             CCCCCCCceEEEEcccccccc------------cccchhhHHHHHHHHHHHHHHHHHhcC-----CCCeEEEEEecCccc
Q 025124          101 QASSSSGGIIINISATLHYTA------------TWYQIHVSAAKAAVDSITRSLALEWGT-----DYAIRVNGIAPGPIK  163 (257)
Q Consensus       101 ~~~~~~~g~ii~iss~~~~~~------------~~~~~~Y~~sK~a~~~l~~~la~e~~~-----~~gi~v~~v~Pg~v~  163 (257)
                            ...++..|+......            ..+...|+.+|.+.+.+++..+.++..     .+++.+..+.|+.+.
T Consensus       123 ------~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vy  196 (356)
T d1rkxa_         123 ------VKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVI  196 (356)
T ss_dssp             ------CCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEE
T ss_pred             ------ccccccccccccccccccccccccccccCCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCee
Confidence                  234555444432211            113456999999999999988887641     246888999999888


Q ss_pred             CCCCCCCC-ChHHHHHHhhhhcc--------CCCCCCHHhHHHHHHHhccC
Q 025124          164 DTAGVSKL-APEEIRSKATDYMA--------AYKFGEKWDIAMAALYLASD  205 (257)
Q Consensus       164 t~~~~~~~-~~~~~~~~~~~~~~--------~~~~~~~~dva~~~~~l~~~  205 (257)
                      .|...... ....+........+        ...+...+|++.++..++..
T Consensus       197 Gp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~a~~~~~~~  247 (356)
T d1rkxa_         197 GGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQK  247 (356)
T ss_dssp             CTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHHHHHHHH
T ss_pred             CCCcchhhHHHHHHHHHHhCCCceEEeeccccccccccccccchhhhhhhh
Confidence            66432211 11222222222211        11245678999998877753

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=3.5e-05  Score=59.56  Aligned_cols=149  Identities=14%  Similarity=0.034  Sum_probs=90.8

Q ss_pred             eEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCC
Q 025124           22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ  101 (257)
Q Consensus        22 ~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~  101 (257)
                      +....+|+.+.+++.       +.+...|+++|++|...       .........++|+.++..+.+.+..    .+   
T Consensus        61 i~~~~~D~~~~~~~~-------~~~~~~d~vi~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~a~~----~~---  119 (232)
T d2bkaa1          61 VNQEVVDFEKLDDYA-------SAFQGHDVGFCCLGTTR-------GKAGAEGFVRVDRDYVLKSAELAKA----GG---  119 (232)
T ss_dssp             CEEEECCGGGGGGGG-------GGGSSCSEEEECCCCCH-------HHHHHHHHHHHHTHHHHHHHHHHHH----TT---
T ss_pred             eeeeeeccccccccc-------ccccccccccccccccc-------cccchhhhhhhcccccceeeecccc----cC---
Confidence            344456666554433       33457999999998431       2334456778899998888887643    22   


Q ss_pred             CCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCe-EEEEEecCcccCCCCCCCCChHHHHHHh
Q 025124          102 ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAI-RVNGIAPGPIKDTAGVSKLAPEEIRSKA  180 (257)
Q Consensus       102 ~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi-~v~~v~Pg~v~t~~~~~~~~~~~~~~~~  180 (257)
                           -.++|++|+.......  ...|+.+|...+...+        ..+. ++..++||.+..+...... .......+
T Consensus       120 -----v~~fi~~Ss~~~~~~~--~~~Y~~~K~~~E~~l~--------~~~~~~~~IlRP~~i~G~~~~~~~-~~~~~~~~  183 (232)
T d2bkaa1         120 -----CKHFNLLSSKGADKSS--NFLYLQVKGEVEAKVE--------ELKFDRYSVFRPGVLLCDRQESRP-GEWLVRKF  183 (232)
T ss_dssp             -----CCEEEEECCTTCCTTC--SSHHHHHHHHHHHHHH--------TTCCSEEEEEECCEEECTTGGGSH-HHHHHHHH
T ss_pred             -----ccccccCCccccccCc--cchhHHHHHHhhhccc--------cccccceEEecCceeecCCCcCcH-HHHHHHHH
Confidence                 4579999998765332  3568999987775543        2233 4677899999865322211 11111222


Q ss_pred             hhhcc----CCCCCCHHhHHHHHHHhccCCC
Q 025124          181 TDYMA----AYKFGEKWDIAMAALYLASDAG  207 (257)
Q Consensus       181 ~~~~~----~~~~~~~~dva~~~~~l~~~~~  207 (257)
                      ....+    .....+++|+|++++.++....
T Consensus       184 ~~~~~~~~~~~~~I~~~dvA~a~i~~~~~~~  214 (232)
T d2bkaa1         184 FGSLPDSWASGHSVPVVTVVRAMLNNVVRPR  214 (232)
T ss_dssp             HCSCCTTGGGGTEEEHHHHHHHHHHHHTSCC
T ss_pred             hhccCCcccCCCeEEHHHHHHHHHHHHhcCc
Confidence            12111    2234567999999888875543

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.97  E-value=0.00021  Score=53.97  Aligned_cols=131  Identities=16%  Similarity=0.114  Sum_probs=77.9

Q ss_pred             CCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccch
Q 025124           47 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI  126 (257)
Q Consensus        47 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~  126 (257)
                      +.+|.+|+++|.....      ...-+...+.|+.++..+++.+..    .+        -.+++++||..+...  ...
T Consensus        61 ~~~d~vi~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~a~~----~~--------v~~~i~~Ss~~~~~~--~~~  120 (212)
T d2a35a1          61 GSIDTAFCCLGTTIKE------AGSEEAFRAVDFDLPLAVGKRALE----MG--------ARHYLVVSALGADAK--SSI  120 (212)
T ss_dssp             SCCSEEEECCCCCHHH------HSSHHHHHHHHTHHHHHHHHHHHH----TT--------CCEEEEECCTTCCTT--CSS
T ss_pred             cchheeeeeeeeeccc------cccccccccchhhhhhhccccccc----cc--------ccccccccccccccc--ccc
Confidence            5789999999854221      112245777888888888876632    22        467999999765432  345


Q ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCe-EEEEEecCcccCCCCCCCCChHHHHHHhhhhcc-CCCCCCHHhHHHHHHHhcc
Q 025124          127 HVSAAKAAVDSITRSLALEWGTDYAI-RVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA-AYKFGEKWDIAMAALYLAS  204 (257)
Q Consensus       127 ~Y~~sK~a~~~l~~~la~e~~~~~gi-~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~~~~l~~  204 (257)
                      .|..+|...+.+.+        ..+. +...++|+.+..+....... ...........+ .....+.+|+|++++.++.
T Consensus       121 ~y~~~K~~~E~~l~--------~~~~~~~~I~Rp~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~  191 (212)
T d2a35a1         121 FYNRVKGELEQALQ--------EQGWPQLTIARPSLLFGPREEFRLA-EILAAPIARILPGKYHGIEACDLARALWRLAL  191 (212)
T ss_dssp             HHHHHHHHHHHHHT--------TSCCSEEEEEECCSEESTTSCEEGG-GGTTCCCC----CHHHHHHHHHHHHHHHHHHT
T ss_pred             chhHHHHHHhhhcc--------ccccccceeeCCcceeCCcccccHH-HHHHHHHhhccCCCCcEEEHHHHHHHHHHHHc
Confidence            78999987765443        2233 57788999998653221100 000000000000 0012567999999999986


Q ss_pred             CC
Q 025124          205 DA  206 (257)
Q Consensus       205 ~~  206 (257)
                      .+
T Consensus       192 ~~  193 (212)
T d2a35a1         192 EE  193 (212)
T ss_dssp             CC
T ss_pred             CC
Confidence            54

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=96.89  E-value=0.0014  Score=51.49  Aligned_cols=93  Identities=17%  Similarity=0.151  Sum_probs=63.4

Q ss_pred             EccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCC
Q 025124           26 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSS  105 (257)
Q Consensus        26 ~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~  105 (257)
                      .+|++|.+.++++++..     ++|+|||.||.......    .+.-+..++.|+.+...+..++..    .        
T Consensus        37 ~~Dl~~~~~~~~~i~~~-----~~D~Vih~Aa~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~----~--------   95 (298)
T d1n2sa_          37 CGDFSNPKGVAETVRKL-----RPDVIVNAAAHTAVDKA----ESEPELAQLLNATSVEAIAKAANE----T--------   95 (298)
T ss_dssp             CCCTTCHHHHHHHHHHH-----CCSEEEECCCCCCHHHH----TTCHHHHHHHHTHHHHHHHHHHTT----T--------
T ss_pred             cCcCCCHHHHHHHHHHc-----CCCEEEEeccccccccc----ccCccccccccccccccchhhhhc----c--------
Confidence            47999999998888765     79999999996543211    122245778888888888877632    1        


Q ss_pred             CCceEEEEccccccccc-----------ccchhhHHHHHHHHHHHH
Q 025124          106 SGGIIINISATLHYTAT-----------WYQIHVSAAKAAVDSITR  140 (257)
Q Consensus       106 ~~g~ii~iss~~~~~~~-----------~~~~~Y~~sK~a~~~l~~  140 (257)
                       ..+++++||.....+.           .+...|+.+|.+.+.+.+
T Consensus        96 -~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~~  140 (298)
T d1n2sa_          96 -GAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQ  140 (298)
T ss_dssp             -TCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHH
T ss_pred             -ccccccccccccccCCCCCCCccccccCCCchHhhhhhhhhhhHH
Confidence             4567777776543221           134579999988776554

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=96.60  E-value=0.024  Score=44.05  Aligned_cols=199  Identities=13%  Similarity=0.065  Sum_probs=109.6

Q ss_pred             HHHHHHHHhcCC-CeEEEE-------------ccCCCHHHHHHHHHHHHH--HhCCccEEEeCCCCCCCCCCCCCCHHHH
Q 025124            9 RSAVAALHSLGI-PAIGLE-------------GDVRKREDAVRVVESTIN--HFGKLDILVNAAAGNFLVPAEDLSPNGF   72 (257)
Q Consensus         9 ~~~~~~l~~~~~-~~~~~~-------------~Dls~~~~~~~~~~~~~~--~~g~id~li~~ag~~~~~~~~~~~~~~~   72 (257)
                      ..++..|.+.|. ++..+.             .++.+........+....  .+..+++++|.|+.....   ..   ..
T Consensus        13 s~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa~~~~~---~~---~~   86 (307)
T d1eq2a_          13 SNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTT---EW---DG   86 (307)
T ss_dssp             HHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCCCTT---CC---CH
T ss_pred             HHHHHHHHhCCCCeEEEEECCCCcchhhcccccchhhhccchHHHHHHhhhhcccchhhhhhhccccccc---cc---cc
Confidence            456677777764 454441             122221122333443333  235688899988743322   11   23


Q ss_pred             HHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCCCceEEEEccccccccc-----------ccchhhHHHHHHHHHHHHH
Q 025124           73 RTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-----------WYQIHVSAAKAAVDSITRS  141 (257)
Q Consensus        73 ~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~-----------~~~~~Y~~sK~a~~~l~~~  141 (257)
                      +...+.|+.+...+...+...             .-++++.||.....+.           .....|+.+|.+.+.+++.
T Consensus        87 ~~~~~~~~~~~~~~l~~~~~~-------------~i~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~~~e~~~~~  153 (307)
T d1eq2a_          87 KYMMDNNYQYSKELLHYCLER-------------EIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQ  153 (307)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHH-------------TCCEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccc-------------cccccccccccccccccccccccccccccccccccccchhhhhccc
Confidence            445677777777777665433             1235666555443322           2456799999999999988


Q ss_pred             HHHHhcCCCCeEEEEEecCcccCCCCCCCC----ChHHHHHHhh----------hhccCCCCCCHHhHHHHHHHhccCCC
Q 025124          142 LALEWGTDYAIRVNGIAPGPIKDTAGVSKL----APEEIRSKAT----------DYMAAYKFGEKWDIAMAALYLASDAG  207 (257)
Q Consensus       142 la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~----~~~~~~~~~~----------~~~~~~~~~~~~dva~~~~~l~~~~~  207 (257)
                      +..+    .++.+..++|..+..|......    ..........          .......+...+|++.++..++....
T Consensus       154 ~~~~----~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~~  229 (307)
T d1eq2a_         154 ILPE----ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV  229 (307)
T ss_dssp             HGGG----CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC
T ss_pred             cccc----cccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhcc
Confidence            8654    4688888888888766432111    0111111111          11112345678999999998886532


Q ss_pred             CcccCcEEEecCCcccCCCCCCcHHHHHHHHH
Q 025124          208 KYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSR  239 (257)
Q Consensus       208 ~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~  239 (257)
                          ...+.+.+|....     ..+..+.|.+
T Consensus       230 ----~~~~~~~~~~~~s-----i~~i~~~i~~  252 (307)
T d1eq2a_         230 ----SGIFNLGTGRAES-----FQAVADATLA  252 (307)
T ss_dssp             ----CEEEEESCSCCBC-----HHHHHHHC--
T ss_pred             ----ccccccccccchh-----HHHHHHHHHH
Confidence                3467777664433     3444555543

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=96.13  E-value=0.022  Score=44.43  Aligned_cols=180  Identities=16%  Similarity=0.081  Sum_probs=93.4

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      ..+.++.+|++|.+.+...+.       ..+.++++++.....               .|..+...++.++    .+.. 
T Consensus        54 ~~v~~v~~d~~d~~~~~~~~~-------~~~~~~~~~~~~~~~---------------~~~~~~~~~l~~a----~~~~-  106 (312)
T d1qyda_          54 LGAKLIEASLDDHQRLVDALK-------QVDVVISALAGGVLS---------------HHILEQLKLVEAI----KEAG-  106 (312)
T ss_dssp             TTCEEECCCSSCHHHHHHHHT-------TCSEEEECCCCSSSS---------------TTTTTHHHHHHHH----HHSC-
T ss_pred             CCcEEEEeecccchhhhhhcc-------Ccchhhhhhhhcccc---------------cchhhhhHHHHHH----HHhc-
Confidence            457889999999988877664       678888888743221               1112222222222    2222 


Q ss_pred             CCCCCCCCceEEEEccccccccc-----ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCC----
Q 025124          100 GQASSSSGGIIINISATLHYTAT-----WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----  170 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~~~-----~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~----  170 (257)
                             ..++++.||.+.....     .....|..+|...    .....    ..++....++|+.+..+.....    
T Consensus       107 -------~~~~v~~Ss~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~----~~~~~~~i~r~~~~~g~~~~~~~~~~  171 (312)
T d1qyda_         107 -------NIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKV----RRAIE----AASIPYTYVSSNMFAGYFAGSLAQLD  171 (312)
T ss_dssp             -------CCSEEECSCCSSCTTSCCCCCSSTTHHHHHHHHH----HHHHH----HTTCCBCEEECCEEHHHHTTTSSCTT
T ss_pred             -------CCcEEEEeeccccCCCcccccchhhhhhHHHHHH----HHhhc----ccccceEEeccceeecCCccchhhHH
Confidence                   3456777765433221     1223344444433    33332    3356677778877754211100    


Q ss_pred             ---CChHHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHHHHHHhccCCC
Q 025124          171 ---LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKSRD  247 (257)
Q Consensus       171 ---~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (257)
                         ..................+.+.+|+|++++.++..+ ...++..+.+.++..+.     ..+++..+.+...++.+-
T Consensus       172 ~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~-~~~~~~~~~~~~~~~~s-----~~e~~~~~~~~~g~~~~~  245 (312)
T d1qyda_         172 GHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDP-QTLNKTMYIRPPMNILS-----QKEVIQIWERLSEQNLDK  245 (312)
T ss_dssp             CCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCG-GGSSSEEECCCGGGEEE-----HHHHHHHHHHHHTCCCEE
T ss_pred             HHhhhcccccccccccccccceeeHHHHHHHHHHHhcCc-cccCceEEEeCCCcCCC-----HHHHHHHHHHHHCCCCeE
Confidence               000000000111111223678999999999998653 22233344454444444     466777777777666543

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=95.79  E-value=0.016  Score=45.02  Aligned_cols=179  Identities=14%  Similarity=0.051  Sum_probs=91.2

Q ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Q 025124           20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR   99 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   99 (257)
                      ..+.++.+|+.+.......++       ..+.++++++....                   .+...+.+++    .... 
T Consensus        55 ~~~~~~~~d~~~~~~~~~~~~-------~~~~vi~~~~~~~~-------------------~~~~~~~~a~----~~~~-  103 (307)
T d1qyca_          55 SGANIVHGSIDDHASLVEAVK-------NVDVVISTVGSLQI-------------------ESQVNIIKAI----KEVG-  103 (307)
T ss_dssp             TTCEEECCCTTCHHHHHHHHH-------TCSEEEECCCGGGS-------------------GGGHHHHHHH----HHHC-
T ss_pred             CCcEEEEeecccchhhhhhhh-------hceeeeeccccccc-------------------chhhHHHHHH----HHhc-
Confidence            457788899999988777665       57889998874321                   1112222222    2222 


Q ss_pred             CCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCC------Ch
Q 025124          100 GQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL------AP  173 (257)
Q Consensus       100 ~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~------~~  173 (257)
                             ...+++.|+............+...+............+    .++....++|+.+..+......      ..
T Consensus       104 -------~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~  172 (307)
T d1qyca_         104 -------TVKRFFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAIEA----EGIPYTYVSSNCFAGYFLRSLAQAGLTAPP  172 (307)
T ss_dssp             -------CCSEEECSCCSSCTTSCCCCTTHHHHHHHHHHHHHHHHH----HTCCBEEEECCEEHHHHTTTTTCTTCSSCC
T ss_pred             -------cccceeeeccccccccccccccccccccccccccchhhc----cCCCceecccceecCCCccchhhhhhhhhh
Confidence                   344666666544333322222333333332333333332    3566777888877643211100      00


Q ss_pred             HHHHHHhhhhccCCCCCCHHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHHHHHHhccCC
Q 025124          174 EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKSR  246 (257)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (257)
                      ...............+.+.+|+|++++.++..... .++..+.+.++..+.     ..+....+.+..+++.+
T Consensus       173 ~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~-~~~~~~~~~~~~~~s-----~~ei~~~~~~~~G~~~~  239 (307)
T d1qyca_         173 RDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRT-LNKTLYLRLPANTLS-----LNELVALWEKKIDKTLE  239 (307)
T ss_dssp             SSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGG-TTEEEECCCGGGEEE-----HHHHHHHHHHHTTSCCE
T ss_pred             cccceeeecccccccCCcHHHHHHHHHHHhcChhh-cCceeEEeCCCCccC-----HHHHHHHHHHHHCCCCc
Confidence            00000011111222367899999999999965432 233334444444443     45566666777666544

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=94.49  E-value=0.13  Score=40.83  Aligned_cols=178  Identities=15%  Similarity=0.088  Sum_probs=95.3

Q ss_pred             CCeEEEEccCCCHHHH-HHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Q 025124           20 IPAIGLEGDVRKREDA-VRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG   98 (257)
Q Consensus        20 ~~~~~~~~Dls~~~~~-~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   98 (257)
                      ..+..+.+|+.|..++ +.+       +...|.++.+......                .++....++..++    .+.+
T Consensus        49 ~~v~~~~gD~~d~~~~~~~a-------~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~aa----~~ag  101 (350)
T d1xgka_          49 PNVTLFQGPLLNNVPLMDTL-------FEGAHLAFINTTSQAG----------------DEIAIGKDLADAA----KRAG  101 (350)
T ss_dssp             TTEEEEESCCTTCHHHHHHH-------HTTCSEEEECCCSTTS----------------CHHHHHHHHHHHH----HHHS
T ss_pred             CCCEEEEeeCCCcHHHHHHH-------hcCCceEEeecccccc----------------hhhhhhhHHHHHH----HHhC
Confidence            4588899999986543 222       3467887776542111                1222233334443    2222


Q ss_pred             CCCCCCCCCceEEEEccccccccc--ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCCCCCCCCC---h
Q 025124           99 RGQASSSSGGIIINISATLHYTAT--WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---P  173 (257)
Q Consensus        99 ~~~~~~~~~g~ii~iss~~~~~~~--~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t~~~~~~~~---~  173 (257)
                              ..+++..||.......  .....|..+|...+.+.+        ..++....++|+.+..........   .
T Consensus       102 --------v~~~v~~Ss~~~~~~~~~~~~~~~~~~k~~~~~~~~--------~~~~~~~~vr~~~~~~~~~~~~~~~~~~  165 (350)
T d1xgka_         102 --------TIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVR--------QLGLPSTFVYAGIYNNNFTSLPYPLFQM  165 (350)
T ss_dssp             --------CCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHHH--------TSSSCEEEEEECEEGGGCBSSSCSSCBE
T ss_pred             --------CCceEEEeeccccccCCcccchhhhhhHHHHHHHHH--------hhccCceeeeeceeeccccccccccccc
Confidence                    3457777876544332  233456667766555433        335667778888765432111100   0


Q ss_pred             HHHHHHh-hhhccCC-----CCCC-HHhHHHHHHHhccCCCCcccCcEEEecCCcccCCCCCCcHHHHHHHHHHHhccCC
Q 025124          174 EEIRSKA-TDYMAAY-----KFGE-KWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKSR  246 (257)
Q Consensus       174 ~~~~~~~-~~~~~~~-----~~~~-~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (257)
                      ....... .-..+..     .+.+ .+|+++.+..++.+......|+.+.+.|. .+.     ..+..+.+.+..+++.+
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~~~~~~g~-~~T-----~~eia~~l~~~~G~~v~  239 (350)
T d1xgka_         166 ELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFE-TLS-----PVQVCAAFSRALNRRVT  239 (350)
T ss_dssp             EECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECSE-EEC-----HHHHHHHHHHHHTSCEE
T ss_pred             cccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCCeEEEEeCC-cCC-----HHHHHHHHHHHHCCcce
Confidence            0000000 0000100     0123 47999999988865444567889888764 344     56778888888887754

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=91.72  E-value=1.1e-06  Score=66.02  Aligned_cols=41  Identities=7%  Similarity=0.092  Sum_probs=26.4

Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccC
Q 025124          123 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD  164 (257)
Q Consensus       123 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v~Pg~v~t  164 (257)
                      .....|...+++....++..+.++. ...+.++.++||.+.+
T Consensus       144 ~~~~~~~~~~a~~~~~a~~~~~~~~-~~~~g~~~~~~G~l~~  184 (212)
T d1jaya_         144 DEKFDWDVPVCGDDDESKKVVMSLI-SEIDGLRPLDAGPLSN  184 (212)
T ss_dssp             TCCCCEEEEEEESCHHHHHHHHHHH-HHSTTEEEEEEESGGG
T ss_pred             ccccCccceEEeCCHHHHHHHHHHH-hhCCCeEEEEeChHHH
Confidence            3344455555555666666666655 4567778899998874

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=87.35  E-value=3.8  Score=29.35  Aligned_cols=128  Identities=18%  Similarity=0.119  Sum_probs=69.3

Q ss_pred             HHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHHHHhHHHHHH
Q 025124            7 VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM   86 (257)
Q Consensus         7 ~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l   86 (257)
                      ....+.+.+...|..+..+..|-..  ....+.+ .....+.++.||+-.+......- . .. .    ....+...+.+
T Consensus        39 ~~~~l~~~l~~~g~~~~~~~~~~~~--~~~~l~~-~~~~~~~~~~vv~l~~~~~~~~~-~-~~-~----~~~~~~~~l~l  108 (209)
T d2fr1a2          39 TSTAAREALESAGARVRELVVDARC--GRDELAE-RLRSVGEVAGVLSLLAVDEAEPE-E-AP-L----ALASLADTLSL  108 (209)
T ss_dssp             HHHHHHHHHHTTSCEEEEEECCTTC--CHHHHHH-HHTTSCCCSEEEECTTTTCCCCS-S-CG-G----GCHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCeEEEecCCCcc--CHHHHHH-HhhccCCCCeEEEeCCCCCCCCc-c-hh-H----HHHHHHHHHHH
Confidence            4456677777778777777666542  2223333 33445789999998765332211 1 11 1    11224455566


Q ss_pred             HHHHHHHHHhcCCCCCCCCCCceEEEEcccccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEE
Q 025124           87 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI  157 (257)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~g~ii~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi~v~~v  157 (257)
                      +|.+..   ...        ..++.+++...... ......-....+++.+|+|+++.|+. ...++++.+
T Consensus       109 ~qal~~---~~~--------~~~l~~vT~~a~~~-~~~d~~~~p~~A~l~Gl~r~~~~E~P-~l~~~~vDl  166 (209)
T d2fr1a2         109 VQAMVS---AEL--------GCPLWTVTESAVAT-GPFERVRNAAHGALWGVGRVIALENP-AVWGGLVDV  166 (209)
T ss_dssp             HHHHHH---TTC--------CCCEEEEEESCSCS-STTSCCSCGGGHHHHHHHHHHHHHCG-GGEEEEEEE
T ss_pred             HHHHHh---CCC--------CCcEEEEEcCCccc-CCCcccCCHhHHhHHHHHHHHHHhCC-CceEEEEEC
Confidence            666532   222        34566665432211 11122234568899999999999986 433444444