BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025126
(257 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O35790|PIGL_RAT N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase OS=Rattus
norvegicus GN=Pigl PE=2 SV=1
Length = 252
Score = 155 bits (391), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 138/253 (54%), Gaps = 11/253 (4%)
Query: 4 LLVIVSTIVVWVASLFKILNSS---RSQSNAAFLTTGDKKNVLLVIAHPDDESMFFSPTI 60
LL + ++ W ++ NS+ RS A G + L+VIAHPDDE+MFF+PTI
Sbjct: 6 LLCVAVAVLTW--GFLRVWNSAERMRSPEQAGLPGAGSR--ALVVIAHPDDEAMFFAPTI 61
Query: 61 NYLTSRRHNLHILCMSNGNADGMGNIRKDELHRACAVLKIPLEQVKVLDLVDFQDGFDKL 120
L + + +LC S+GN G IRK EL ++CAVL IP +V ++D +F D +
Sbjct: 62 LGLARLKQQVSLLCFSSGNYYNQGEIRKKELLQSCAVLGIPPSRVMIIDKREFPDDPEVQ 121
Query: 121 WNHKSLAKIVEEEVVNCSIDLIITFDNYGVSGHCNHRDVHHGICRSYLNGTSERNIEAWE 180
W+ + +A + + + + DL++TFD GVSGH NH ++ + + G
Sbjct: 122 WDTEHVASTILQHIHANATDLVVTFDAEGVSGHSNHIALYKAVRALHSGGKLPEGCSVLT 181
Query: 181 LMTTNILRKYSGPLDIWLSILSATQYRRGQVHCLLNEHPKKSFLAMSQHHSQWVWFRKLF 240
L + N+LRKY LD+ ++LS +G + L ++ ++ AMS H SQ +WFR L+
Sbjct: 182 LQSVNVLRKYVFLLDLPWTLLSP----QGVLFVLTSKEVAQAKKAMSCHRSQLLWFRHLY 237
Query: 241 VSFSSYTYVNTLK 253
FS Y VN+L+
Sbjct: 238 TVFSRYMSVNSLQ 250
>sp|Q5SX19|PIGL_MOUSE N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase OS=Mus
musculus GN=Pigl PE=2 SV=1
Length = 252
Score = 150 bits (380), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 135/253 (53%), Gaps = 11/253 (4%)
Query: 4 LLVIVSTIVVWVASLFKILNSS---RSQSNAAFLTTGDKKNVLLVIAHPDDESMFFSPTI 60
L + ++ W ++ NS+ RS A G + L+VIAHPDDE+MFF+PT+
Sbjct: 6 FLCVAVAVLTW--GFLRVWNSAERMRSPEQAGLPGAGSR--ALVVIAHPDDEAMFFAPTM 61
Query: 61 NYLTSRRHNLHILCMSNGNADGMGNIRKDELHRACAVLKIPLEQVKVLDLVDFQDGFDKL 120
L + +LC S+GN G IRK EL ++CAVL IP +V ++D DF D +
Sbjct: 62 LGLARLEQQVSLLCFSSGNYYNQGEIRKKELLQSCAVLGIPPSRVMIIDKRDFPDDPEVQ 121
Query: 121 WNHKSLAKIVEEEVVNCSIDLIITFDNYGVSGHCNHRDVHHGICRSYLNGTSERNIEAWE 180
W+ + +A + + + DL++TFD GVSGH NH ++ + + G +
Sbjct: 122 WDTELVASTLLQHIHANGTDLVVTFDAEGVSGHSNHIALYKAVRALHSGGKLPKGCSVLT 181
Query: 181 LMTTNILRKYSGPLDIWLSILSATQYRRGQVHCLLNEHPKKSFLAMSQHHSQWVWFRKLF 240
L + N LRKY+ LD+ ++LS + L ++ ++ AMS H SQ +WFR L+
Sbjct: 182 LQSVNALRKYAFLLDLPWTLLSPQDV----LFVLTSKEVAQAKKAMSCHRSQLLWFRYLY 237
Query: 241 VSFSSYTYVNTLK 253
V FS Y +N+L+
Sbjct: 238 VLFSRYMRINSLR 250
>sp|Q54C64|PIGL_DICDI Probable N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase
OS=Dictyostelium discoideum GN=pigl PE=3 SV=1
Length = 258
Score = 150 bits (379), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 87/242 (35%), Positives = 126/242 (52%), Gaps = 25/242 (10%)
Query: 39 KKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNGNADGMGNIRKDELHRACAVL 98
KK VL VIAHPDDE MFF+PTI + + + C+SNGNA G+G IR+ EL +C +
Sbjct: 16 KKKVLFVIAHPDDECMFFTPTIQHYNFIGSEIFVACLSNGNAVGLGKIREKELIDSCIDM 75
Query: 99 KIPLEQVKVLDLVDFQDGFDKLWNHKSLAKIVEEEVVNCSIDLIITFDNYGVSGHCNHRD 158
I E V +FQDG + +W+ + K + + S D++I+FD G+S H NH
Sbjct: 76 GINQENVFFDQTNNFQDGMNIIWDTDLVEKTILSFIKQTSADIVISFDECGISSHPNHIS 135
Query: 159 VHHGICRSYLNGTS-------------------------ERNIEAWELMTTNILRKYSGP 193
+ +G+ + N +S + I+A++L T NI+RKY G
Sbjct: 136 ISNGLKQLMKNKSSSTTTTSTTSSSSSSSSLSNRTTNNLNKEIKAYKLETVNIIRKYIGI 195
Query: 194 LDIWLSILSATQYRRGQVHCLLNEHPKKSFLAMSQHHSQWVWFRKLFVSFSSYTYVNTLK 253
DI L+ L + Q P S+ M++H SQ+VWFR LFV S Y+++NTL
Sbjct: 196 ADIPLTKLLSYDENSTQTFISTQLFPPSSYSPMTKHKSQFVWFRYLFVFLSRYSFINTLI 255
Query: 254 RI 255
I
Sbjct: 256 EI 257
>sp|Q9Y2B2|PIGL_HUMAN N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase OS=Homo
sapiens GN=PIGL PE=1 SV=1
Length = 252
Score = 148 bits (373), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 136/251 (54%), Gaps = 7/251 (2%)
Query: 3 WLLVIVSTIVVWVASLFKILNSSRSQSNAAFLTTGDKKNVLLVIAHPDDESMFFSPTINY 62
WLL + ++ W L+ +S R +S G + LLVIAHPDDE+MFF+PT+
Sbjct: 5 WLLCVALAVLAW-GFLWVWDSSERMKSREQGGRLGAESRTLLVIAHPDDEAMFFAPTVLG 63
Query: 63 LTSRRHNLHILCMSNGNADGMGNIRKDELHRACAVLKIPLEQVKVLDLVDFQDGFDKLWN 122
L RH +++LC S GN G RK EL ++C VL IPL V ++D DF D W+
Sbjct: 64 LARLRHWVYLLCFSAGNYYNQGETRKKELLQSCDVLGIPLSSVMIIDNRDFPDDPGMQWD 123
Query: 123 HKSLAKIVEEEVVNCSIDLIITFDNYGVSGHCNHRDVHHGICRSYLNGTSERNIEAWELM 182
+ +A+++ + + I+L++TFD GVSGH NH ++ + + G + L
Sbjct: 124 TEHVARVLLQHIEVNGINLVVTFDAGGVSGHSNHIALYAAVRALHSEGKLPKGCSVLTLQ 183
Query: 183 TTNILRKYSGPLDIWLSILSATQYRRGQVHCLLN-EHPKKSFLAMSQHHSQWVWFRKLFV 241
+ N+LRKY I L L + V +LN + ++ AMS H SQ +WFR+L++
Sbjct: 184 SVNVLRKY-----ISLLDLPLSLLHTQDVLFVLNSKEVAQAKKAMSCHRSQLLWFRRLYI 238
Query: 242 SFSSYTYVNTL 252
FS Y +N+L
Sbjct: 239 IFSRYMRINSL 249
>sp|A6QQ24|PIGL_BOVIN N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase OS=Bos
taurus GN=PIGL PE=2 SV=1
Length = 253
Score = 143 bits (361), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/217 (39%), Positives = 116/217 (53%), Gaps = 4/217 (1%)
Query: 36 TGDKKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNGNADGMGNIRKDELHRAC 95
G LLV AHPDDE+MFF+PTI L RH L +LC S GN G IRK EL ++C
Sbjct: 38 PGGGSRTLLVTAHPDDEAMFFAPTILGLARLRHQLFLLCFSAGNYYNQGEIRKKELLQSC 97
Query: 96 AVLKIPLEQVKVLDLVDFQDGFDKLWNHKSLAKIVEEEVVNCSIDLIITFDNYGVSGHCN 155
VL IP V +++ DF D D W+ A ++ + V I L++TFD GVSGH N
Sbjct: 98 DVLGIPPSNVMIIENRDFPDDPDVRWDPDRAADVLLQHVEANGIKLVVTFDEGGVSGHSN 157
Query: 156 HRDVHHGICRSYLNGTSERNIEAWELMTTNILRKYSGPLDIWLSILSATQYRRGQVHCLL 215
H ++ + G + L + N+LRKY LD+ S+L A R + L
Sbjct: 158 HVALNAAVRTLQAEGKLPKGCSVLTLQSVNLLRKYLCLLDLPCSLLLA----RDALFVLT 213
Query: 216 NEHPKKSFLAMSQHHSQWVWFRKLFVSFSSYTYVNTL 252
++ AMS H SQ +WFR+L++ FS Y +N+L
Sbjct: 214 QREAAQAQRAMSCHRSQLLWFRRLYMLFSRYMRINSL 250
>sp|Q9HDW9|GPI12_SCHPO Probable N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=gpi12 PE=3 SV=1
Length = 248
Score = 137 bits (346), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 134/252 (53%), Gaps = 17/252 (6%)
Query: 9 STIVVWVASLFKILNSSRSQSNAAFLTTGDKKNVLLVIAHPDDESMFFSPTINYLTSRRH 68
ST++V ++ N S S + +++L V AHPDDESMFF PTI+YL ++
Sbjct: 6 STLLVTAIAVLSTANESSSGQEKLAV-----ESILFVFAHPDDESMFFGPTIDYLGNQHS 60
Query: 69 N-LHILCMSNGNADGMGNIRKDELHRACAVLKIPLEQVKVLDLVDFQDGFDKLWNHKSLA 127
+H+LC+SNGNADG+G++R+ EL A + +I V V+ QDG W+ +A
Sbjct: 61 TRVHVLCLSNGNADGLGSVREKELVVAASKYQIDKTNVHVVSDPQLQDGMQAKWDPTDVA 120
Query: 128 KIVEEEVVNCSIDLIITFDNYGVSGHCNHRDVHHGICRSYLNGTSERNIEAWELMTTNIL 187
K + + + +I +ITFDN G+SGH NH + G + + T + ++ + L + NI
Sbjct: 121 KHISQIIERYNIKTLITFDNKGISGHPNHIACYEGAMK-IVKATPQ--VQVFVLESVNIF 177
Query: 188 RKYSGPLDIWLSILSATQYRRGQVHCLLNEHPKKSFLAMSQ-----HHSQWVWFRKLFVS 242
RKY LD +I + Q + G+ ++ +KS + H SQ VWFR ++
Sbjct: 178 RKYISYLD---TIPTLVQSQAGRNDTIIIHADRKSTQRIRDAMVRGHKSQMVWFRYGWIY 234
Query: 243 FSSYTYVNTLKR 254
S Y N LKR
Sbjct: 235 LSKYMSNNVLKR 246
>sp|P23797|GPI12_YEAST N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=GPI12 PE=1 SV=2
Length = 304
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 138/281 (49%), Gaps = 39/281 (13%)
Query: 5 LVIVSTIVVWVASLFKILNSSRSQSNAAFLTTGDKKNVLLVIAHPDDESMFFSPTINYLT 64
L IV TI+ ++ KI++ + + F + LVIAHPDDE MFFSP I+ L
Sbjct: 21 LAIVLTIL-YIYFTPKIVSRNNASLQHIFPHKYGDYEINLVIAHPDDEVMFFSPIISQLN 79
Query: 65 S---RRHNLHILCMSNGNADGMGNIRKDELHRACAVLKIPLEQVKVLDLVDFQDGFDKLW 121
S R +I+C+S GNA+G+G R EL+ + A+L + E+ + ++DFQDG D++W
Sbjct: 80 SYFPRTVPFNIICLSKGNAEGLGETRVRELNESAALL-LHNERAVSVQVMDFQDGMDEIW 138
Query: 122 NHKSLAKIVEE--EVVNCSID-LIITFDNYGVSGHCNHRDVHHGICR---SYLNGTSERN 175
+ S+ + + ++ N +++ +I+TFD+YGVS H NH+ + + + Y ++RN
Sbjct: 139 DIDSITSSLSQKIDIKNHNLNQIIVTFDSYGVSNHINHKSCYAAVKKLVDDYAQPKTKRN 198
Query: 176 IEA-----------------------WELMTTNILRKYSGPLDIWLSILSATQYRRGQVH 212
+ WE++ IL P + L
Sbjct: 199 EQPPHVTALYLRSYKNNIVLKYNSFIWEIL--KILYDLISPFRRIIQALPPNTAAEKDKL 256
Query: 213 CLLNEHPKK--SFLAM-SQHHSQWVWFRKLFVSFSSYTYVN 250
L+N H + +F M + H SQ VWFR + FS + +VN
Sbjct: 257 SLMNTHAQYVLAFATMLNAHESQVVWFRYGWWIFSRFVFVN 297
>sp|Q5UQW3|YL374_MIMIV Uncharacterized protein L374 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L374 PE=4 SV=1
Length = 225
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 60/137 (43%), Gaps = 23/137 (16%)
Query: 36 TGDKKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNGNADGMGNI--------- 86
T K + L++IAHPDDE +F S + ++C++NG+ + I
Sbjct: 36 TQYKADKLMIIAHPDDELIFGSKEL----IENPGWKVICITNGSKKSVNKISICYLMGHR 91
Query: 87 ---RKDELHRACAVLKIPLEQVKVLDLVDFQDG-FDKLWNHKSLAKIVEEEVVNCSIDLI 142
R+DE +L E + D++D F+ WN K L +E + + ++
Sbjct: 92 STYRRDEFINMMNLLHCQYE------IWDYEDNYFNSNWNLKQLKNQLENLLREKNYKMV 145
Query: 143 ITFDNYGVSGHCNHRDV 159
+T + G GH H+ +
Sbjct: 146 LTHNLAGEYGHTQHKTI 162
>sp|O31857|YOJG_BACSU Uncharacterized deacetylase YojG OS=Bacillus subtilis (strain 168)
GN=yojG PE=3 SV=2
Length = 221
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 27/203 (13%)
Query: 39 KKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNG------------NADGMGNI 86
K++VL+++ HPDDES + I + + C + G N + + +
Sbjct: 2 KEHVLVILPHPDDESYGVAGLIALNRKKDIPVTYACATLGEMGRNMGDPFFANRETLPLL 61
Query: 87 RKDELHRACAVLKIPLEQVKVLDLVDFQDGFDKLWNHKSLAKIVEEEVVNCSIDLIITF- 145
RK EL AC + I +++L L D F+ + + LA I+EE + + LI+TF
Sbjct: 62 RKQELINACKEMDI--NDLRMLGLRDKTLEFE---DDEYLADIMEEIIDDVKPSLIVTFY 116
Query: 146 DNYGVSGHCNHRDVHHGICRSYLNGTSERNIEAWELMTTNILRKYSGPLDIWLSI----- 200
+GV H +H + R+ E + T + G D+ L I
Sbjct: 117 PGHGV--HPDHDACGEAVIRALYRKKKEDRPRTICMAITRNREEVLGEADVVLDIKEVAD 174
Query: 201 --LSATQYRRGQVHCLLNEHPKK 221
++A + R Q +L E +K
Sbjct: 175 IKMNALRAHRTQTEGMLRELEEK 197
>sp|D0LD40|MSHB_GORB4 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Gordonia bronchialis (strain ATCC 25592 /
DSM 43247 / JCM 3198 / NCTC 10667) GN=mshB PE=3 SV=1
Length = 283
Score = 40.4 bits (93), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 59/158 (37%), Gaps = 43/158 (27%)
Query: 42 VLLVIAHPDDESMFFSPTINYLTSRRHNLHILC-----------------MSNGNADGMG 84
+LLV AHPDDE++ TI ++ +L +++G AD +G
Sbjct: 1 MLLVHAHPDDETIMTGGTIARYLDEGVDVRVLTFTLGEEGEVIGDRWAQLVADGGADQLG 60
Query: 85 NIRKDELHRACAVLKIP-LEQVKVLDLVDFQDGFDKLWNHKSLAKIV----EEEVVNCSI 139
R EL A A L P V+ L G W +A +VN
Sbjct: 61 GFRIGELTGALAALSPPGGSPVQPWFL-----GGAGRWRDSGMAGSAAARHPRALVNAGF 115
Query: 140 D----------------LIITFDNYGVSGHCNHRDVHH 161
D ++IT+D+ G GH +H+ VH
Sbjct: 116 DEPVGVLTDILESFAPQVVITYDSAGTYGHPDHKLVHE 153
>sp|Q47SP3|MSHB_THEFY 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Thermobifida fusca (strain YX) GN=mshB
PE=3 SV=1
Length = 286
Score = 39.3 bits (90), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 62/160 (38%), Gaps = 37/160 (23%)
Query: 40 KNVLLVIAHPDDESMFFSPTI-NYLTSRRHNLHILC---------------MSNGNADGM 83
+ +LLV AHPDDE++ T+ Y H + C +++ G+
Sbjct: 4 RRLLLVHAHPDDETIVTGATMARYAAEGAHITLVTCTLGEEGEVIPPELAHLASDREGGL 63
Query: 84 GNIRKDELHRACAVLKIPLEQVKVLDLVDFQDG----------------FDKLWNHKSLA 127
G R EL RACA L + +Q + ++D D LA
Sbjct: 64 GEYRVTELERACAALGV-HDQRFLGGKGRYRDSGMMGAPTNSHPACFWQADVDTAAHELA 122
Query: 128 KIVEEEVVNCSIDLIITFDNYGVSGHCNHRDVHHGICRSY 167
I+ E +I+T+D+ G GH +H H R++
Sbjct: 123 AIIRE----VRPQVIVTYDDNGGYGHPDHIQAHRVTMRAF 158
>sp|C1AZH2|MSHB_RHOOB 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Rhodococcus opacus (strain B4) GN=mshB
PE=3 SV=1
Length = 292
Score = 38.9 bits (89), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 66/168 (39%), Gaps = 29/168 (17%)
Query: 39 KKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILC----------------MSNGNADG 82
++ +LLV AHPDDE++ TI + ++H+L + G AD
Sbjct: 3 ERRLLLVHAHPDDETLTTGGTIARYAADGADVHVLTCTLGEEGEVIGDEWAHLVAGAADQ 62
Query: 83 MGNIRKDELHRACAVLKIPLEQVKVLDLVDFQD----GFDKLWNHKSLAKIVEEEVVNCS 138
+G R EL A + L + +L F+D G N ++ + V
Sbjct: 63 LGGFRIGELTSALSSLGAGRPRF-LLGAGRFRDSGMAGTASAANPRAFVNADPDAVTAAI 121
Query: 139 IDLI--------ITFDNYGVSGHCNHRDVHHGICRSYLNGTSERNIEA 178
+ +I +T+D G GH +H H + + +ER +A
Sbjct: 122 VAVIRDVRPHVVVTYDPDGGYGHPDHIQAHRIVTAAVEAAGTERFPDA 169
>sp|D1A8M1|MSHB_THECD 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Thermomonospora curvata (strain ATCC
19995 / DSM 43183 / JCM 3096 / NCIMB 10081) GN=mshB PE=3
SV=1
Length = 297
Score = 38.1 bits (87), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 58/154 (37%), Gaps = 27/154 (17%)
Query: 40 KNVLLVIAHPDDESMFFSPTI-NYLTSRRHNLHILC---------------MSNGNADGM 83
+ +L V AHPDDES+ T+ Y H + C +++ D +
Sbjct: 6 RRILFVHAHPDDESISTGATMAKYAAEGAHVCLVTCTLGEEGEIIPEELRHLASDKEDRL 65
Query: 84 GNIRKDELHRACAVLKIPLEQV---------KVLDLVDFQDGFDKLWNH--KSLAKIVEE 132
G R EL ACA L + + + D W + A+++ E
Sbjct: 66 GEFRIGELKEACAALGVTDHRFLGGAGRWRDSGMMGAPSNDHPRCFWRADVEEAARLLAE 125
Query: 133 EVVNCSIDLIITFDNYGVSGHCNHRDVHHGICRS 166
+ +I+T+D +G GH +H H R+
Sbjct: 126 IIREVRPQVIVTYDEHGHYGHPDHIQAHRVTVRA 159
>sp|A1TDR0|MSHB_MYCVP 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Mycobacterium vanbaalenii (strain DSM
7251 / PYR-1) GN=mshB PE=3 SV=1
Length = 284
Score = 38.1 bits (87), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 58/154 (37%), Gaps = 36/154 (23%)
Query: 38 DKKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNGN----------------AD 81
+ +L V AHPDDE++ TI + +R +H++ + G AD
Sbjct: 2 ETARLLFVHAHPDDETLTTGATIAHYVARGAQVHVITCTLGEEGEVIGDEWAQLAVDRAD 61
Query: 82 GMGNIRKDELHRACAVLKI---------------PLEQVKVLDLVDFQDGFDKLWNHKSL 126
+G R EL A A L + ++ F DG D +L
Sbjct: 62 QLGGYRIGELTAALAELGVDRPRFLGGAGRWRDSGMDGTPARQQQRFVDG-DFAEQTATL 120
Query: 127 AKIVEEEVVNCSIDLIITFDNYGVSGHCNHRDVH 160
A ++E +++T+D G GH +H H
Sbjct: 121 AAAIDE----LRPHVVVTYDPNGGYGHPDHIHAH 150
>sp|A8M3H2|MSHB_SALAI 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Salinispora arenicola (strain CNS-205)
GN=mshB PE=3 SV=1
Length = 308
Score = 37.7 bits (86), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 73/186 (39%), Gaps = 32/186 (17%)
Query: 34 LTTGDKKNVLLVIAHPDDESMFFSPTI-NYLTSRRHNLHILC---------------MSN 77
+TT + +LLV AHPDDE++ T+ +Y + H + C ++
Sbjct: 4 VTTLPDRRLLLVHAHPDDEAIGTGATMAHYAATGGHVTLVTCTLGEEGEVHVPELAQLAA 63
Query: 78 GNADGMGNIRKDELHRACAVLKIP----------LEQVKVLDLV--DFQDGFDKLWNHKS 125
AD +G R EL AC L + ++ L + F + ++
Sbjct: 64 AGADQLGGYRIGELAAACRSLGVTDHRFLGGAGRYRDSGMMGLATNEHPRAFWRADLDEA 123
Query: 126 LAKIVEEEVVNCSIDLIITFDNYGVSGHCNHRDVHHGICRSYLNGTSERNIEA---WELM 182
A +V E + +++T+D+ G GH +H H R+Y E A W M
Sbjct: 124 AAHLV-ELMREVRPQVMVTYDDNGFYGHPDHIQAHRVAMRAYELAAVEGFAPAKVYWTAM 182
Query: 183 TTNILR 188
++L
Sbjct: 183 PQSVLE 188
>sp|A4T907|MSHB_MYCGI 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Mycobacterium gilvum (strain PYR-GCK)
GN=mshB PE=3 SV=1
Length = 284
Score = 37.7 bits (86), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 57/154 (37%), Gaps = 36/154 (23%)
Query: 38 DKKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNGN----------------AD 81
+ +L V AHPDDE++ TI + T+R + ++ + G AD
Sbjct: 2 ETPRLLFVHAHPDDETLTTGATIAHYTARGAEVQVITCTLGEEGEVIGDRWAQLAVDHAD 61
Query: 82 GMGNIRKDELHRACAVLKI---------------PLEQVKVLDLVDFQDGFDKLWNHKSL 126
+G R EL A A L + +E F DG D L
Sbjct: 62 QLGGYRIGELTAALAALGVDRPRYLGGAGRWRDSGMEGTPARRRERFVDG-DVAEQTAVL 120
Query: 127 AKIVEEEVVNCSIDLIITFDNYGVSGHCNHRDVH 160
A ++E +++T+D G GH +H H
Sbjct: 121 AAAIDE----LRPHVVVTYDPNGGYGHPDHIHTH 150
>sp|A4F8G5|MSHB1_SACEN 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase 1 OS=Saccharopolyspora erythraea (strain
NRRL 23338) GN=mshB1 PE=3 SV=1
Length = 303
Score = 37.4 bits (85), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 16/83 (19%)
Query: 34 LTTGDKKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNG--------------- 78
+T +LLV AHPDDE+++ TI +R + ++ + G
Sbjct: 1 MTLTAPPRLLLVHAHPDDETLWTGGTIARYAARGVQVVVVTCTLGEEGEVIPDNLRGLAA 60
Query: 79 -NADGMGNIRKDELHRACAVLKI 100
AD +G R EL ACA L++
Sbjct: 61 DQADQLGGYRVGELRSACAALRV 83
>sp|A0LW30|MSHB_ACIC1 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Acidothermus cellulolyticus (strain ATCC
43068 / 11B) GN=mshB PE=3 SV=1
Length = 292
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 16/77 (20%)
Query: 40 KNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNG----------------NADGM 83
+++LLV AHPDDES+ T+ Y ++ + ++ + G AD +
Sbjct: 3 RSLLLVHAHPDDESISTGATMAYYAAQGVRVTLVTCTLGEEGEILVPDLRLLAADEADQL 62
Query: 84 GNIRKDELHRACAVLKI 100
G R EL ACA L +
Sbjct: 63 GGYRISELAAACAALGV 79
>sp|O50426|MSHB_MYCTU 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Mycobacterium tuberculosis GN=mshB PE=1
SV=1
Length = 303
Score = 36.2 bits (82), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 16/79 (20%)
Query: 38 DKKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNGN----------------AD 81
+ +L V AHPDDES+ TI + TSR +H++ + G AD
Sbjct: 3 ETPRLLFVHAHPDDESLSNGATIAHYTSRGAQVHVVTCTLGEEGEVIGDRWAQLTADHAD 62
Query: 82 GMGNIRKDELHRACAVLKI 100
+G R EL A L +
Sbjct: 63 QLGGYRIGELTAALRALGV 81
>sp|C6DUY7|MSHB_MYCTK 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Mycobacterium tuberculosis (strain KZN
1435 / MDR) GN=mshB PE=3 SV=1
Length = 303
Score = 36.2 bits (82), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 16/79 (20%)
Query: 38 DKKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNGN----------------AD 81
+ +L V AHPDDES+ TI + TSR +H++ + G AD
Sbjct: 3 ETPRLLFVHAHPDDESLSNGATIAHYTSRGAQVHVVTCTLGEEGEVIGDRWAQLTADHAD 62
Query: 82 GMGNIRKDELHRACAVLKI 100
+G R EL A L +
Sbjct: 63 QLGGYRIGELTAALRALGV 81
>sp|A5WLJ9|MSHB_MYCTF 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Mycobacterium tuberculosis (strain F11)
GN=mshB PE=3 SV=1
Length = 303
Score = 36.2 bits (82), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 16/79 (20%)
Query: 38 DKKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNGN----------------AD 81
+ +L V AHPDDES+ TI + TSR +H++ + G AD
Sbjct: 3 ETPRLLFVHAHPDDESLSNGATIAHYTSRGAQVHVVTCTLGEEGEVIGDRWAQLTADHAD 62
Query: 82 GMGNIRKDELHRACAVLKI 100
+G R EL A L +
Sbjct: 63 QLGGYRIGELTAALRALGV 81
>sp|A5U1L9|MSHB_MYCTA 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Mycobacterium tuberculosis (strain ATCC
25177 / H37Ra) GN=mshB PE=3 SV=1
Length = 303
Score = 36.2 bits (82), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 16/79 (20%)
Query: 38 DKKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNGN----------------AD 81
+ +L V AHPDDES+ TI + TSR +H++ + G AD
Sbjct: 3 ETPRLLFVHAHPDDESLSNGATIAHYTSRGAQVHVVTCTLGEEGEVIGDRWAQLTADHAD 62
Query: 82 GMGNIRKDELHRACAVLKI 100
+G R EL A L +
Sbjct: 63 QLGGYRIGELTAALRALGV 81
>sp|C1AMG5|MSHB_MYCBT 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Mycobacterium bovis (strain BCG / Tokyo
172 / ATCC 35737 / TMC 1019) GN=mshB PE=3 SV=1
Length = 303
Score = 36.2 bits (82), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 16/79 (20%)
Query: 38 DKKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNGN----------------AD 81
+ +L V AHPDDES+ TI + TSR +H++ + G AD
Sbjct: 3 ETPRLLFVHAHPDDESLSNGATIAHYTSRGAQVHVVTCTLGEEGEVIGDRWAQLTADHAD 62
Query: 82 GMGNIRKDELHRACAVLKI 100
+G R EL A L +
Sbjct: 63 QLGGYRIGELTAALRALGV 81
>sp|A1KHW1|MSHB_MYCBP 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Mycobacterium bovis (strain BCG / Pasteur
1173P2) GN=mshB PE=3 SV=1
Length = 303
Score = 36.2 bits (82), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 16/79 (20%)
Query: 38 DKKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNGN----------------AD 81
+ +L V AHPDDES+ TI + TSR +H++ + G AD
Sbjct: 3 ETPRLLFVHAHPDDESLSNGATIAHYTSRGAQVHVVTCTLGEEGEVIGDRWAQLTADHAD 62
Query: 82 GMGNIRKDELHRACAVLKI 100
+G R EL A L +
Sbjct: 63 QLGGYRIGELTAALRALGV 81
>sp|Q7U0H2|MSHB_MYCBO 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Mycobacterium bovis (strain ATCC BAA-935
/ AF2122/97) GN=mshB PE=3 SV=1
Length = 303
Score = 36.2 bits (82), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 16/79 (20%)
Query: 38 DKKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNGN----------------AD 81
+ +L V AHPDDES+ TI + TSR +H++ + G AD
Sbjct: 3 ETPRLLFVHAHPDDESLSNGATIAHYTSRGAQVHVVTCTLGEEGEVIGDRWAQLTADHAD 62
Query: 82 GMGNIRKDELHRACAVLKI 100
+G R EL A L +
Sbjct: 63 QLGGYRIGELTAALRALGV 81
>sp|Q8NCM8|DYHC2_HUMAN Cytoplasmic dynein 2 heavy chain 1 OS=Homo sapiens GN=DYNC2H1 PE=1
SV=4
Length = 4307
Score = 36.2 bits (82), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 55 FFSPTINYLTSR-RHNLHI-LCMSNGNADGMGNIRKDE-LHRACAVL 98
FF P NY T R + NLHI L M + N++ M N + LH+ C VL
Sbjct: 2760 FFGPVFNYFTYRIQQNLHIVLIMDSANSNFMINCESNPALHKKCQVL 2806
>sp|Q9CBX4|MSHB_MYCLE 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Mycobacterium leprae (strain TN) GN=mshB
PE=3 SV=1
Length = 308
Score = 35.4 bits (80), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 59/150 (39%), Gaps = 28/150 (18%)
Query: 38 DKKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNGN----------------AD 81
+ +L V AHPDDES+ TI + TSR + ++ + G AD
Sbjct: 3 ETPRLLFVHAHPDDESLSNGATIAHYTSRGAQVQVVTCTLGEEGEVIGDRWAELTVDHAD 62
Query: 82 GMGNIRKDELHRACAVLKIPLEQVKVLDLVDFQDGFDKLWNHKSLAKIV---EEEVVNCS 138
+G R EL A L + + + ++D + + + + E E V
Sbjct: 63 QLGGYRIFELTEALRALGVSA-PIYLGGAGRWRDSGMRGTAPRRRQRFIDADENEAVGAL 121
Query: 139 IDLI--------ITFDNYGVSGHCNHRDVH 160
+ +I +T+D +G GH +H H
Sbjct: 122 VAIIRELRPHVVVTYDPHGGYGHPDHVHTH 151
>sp|B8ZRQ3|MSHB_MYCLB 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Mycobacterium leprae (strain Br4923)
GN=mshB PE=3 SV=1
Length = 308
Score = 35.4 bits (80), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 59/150 (39%), Gaps = 28/150 (18%)
Query: 38 DKKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNGN----------------AD 81
+ +L V AHPDDES+ TI + TSR + ++ + G AD
Sbjct: 3 ETPRLLFVHAHPDDESLSNGATIAHYTSRGAQVQVVTCTLGEEGEVIGDRWAELTVDHAD 62
Query: 82 GMGNIRKDELHRACAVLKIPLEQVKVLDLVDFQDGFDKLWNHKSLAKIV---EEEVVNCS 138
+G R EL A L + + + ++D + + + + E E V
Sbjct: 63 QLGGYRIFELTEALRALGVSA-PIYLGGAGRWRDSGMRGTAPRRRQRFIDADENEAVGAL 121
Query: 139 IDLI--------ITFDNYGVSGHCNHRDVH 160
+ +I +T+D +G GH +H H
Sbjct: 122 VAIIRELRPHVVVTYDPHGGYGHPDHVHTH 151
>sp|C4Y8B4|KEX1_CLAL4 Pheromone-processing carboxypeptidase KEX1 OS=Clavispora lusitaniae
(strain ATCC 42720) GN=KEX1 PE=3 SV=1
Length = 654
Score = 35.0 bits (79), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 5/102 (4%)
Query: 5 LVIVSTIVVWVASLFKILNSSRSQSNAAFLT--TGDKKNVLLVIAHPDDESM---FFSPT 59
L+ ++ I++ + L I ++ RS+ + T +G KKNV P +E F S T
Sbjct: 534 LIQLAVIIILIWGLCAIYSTYRSKPTSIIKTKPSGRKKNVQWADLMPQEEPAPKGFLSKT 593
Query: 60 INYLTSRRHNLHILCMSNGNADGMGNIRKDELHRACAVLKIP 101
+N L+ H + + G DGM + D + P
Sbjct: 594 LNKLSRTEHKYVPVDIELGPTDGMDDASSDSGPSNVGTAETP 635
>sp|C6WKX3|MSHB_ACTMD 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Actinosynnema mirum (strain ATCC 29888 /
DSM 43827 / NBRC 14064 / IMRU 3971) GN=mshB PE=3 SV=1
Length = 283
Score = 34.7 bits (78), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 59/158 (37%), Gaps = 45/158 (28%)
Query: 39 KKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNGN----------------ADG 82
+LLV AHPDDES++ TI + + ++ + G AD
Sbjct: 6 PPRLLLVHAHPDDESLWTGGTIARYAADGVQVTVVTCTLGEEGEIIPPALRELAADAADQ 65
Query: 83 MGNIRKDELHRACAVLKIPLEQVKVLDLVDFQDGFDKLWNHKSL-------------AKI 129
+G R EL ACA L + + F G + W + A
Sbjct: 66 LGGYRVAELRAACAALGVTDHR--------FLGGHGR-WRDSGMVGTAANAHPRAFVAGS 116
Query: 130 VEEE------VVNC-SIDLIITFDNYGVSGHCNHRDVH 160
+E+ ++N +++T+D +G GH +H H
Sbjct: 117 AQEQADELLAIINAVKPQVVVTYDGFGGYGHPDHIRAH 154
>sp|Q45VK7|DYHC2_MOUSE Cytoplasmic dynein 2 heavy chain 1 OS=Mus musculus GN=Dync2h1 PE=1
SV=1
Length = 4306
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 55 FFSPTINYLTSR-RHNLHI-LCMSNGNADGMGNIRKDE-LHRACAVL 98
FF P NY T R + NLHI L M + N + + N + LH+ C VL
Sbjct: 2760 FFGPVFNYFTYRIQQNLHIVLIMDSANLNFIVNCESNPALHKKCQVL 2806
>sp|Q6NI09|MSHB_CORDI 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Corynebacterium diphtheriae (strain ATCC
700971 / NCTC 13129 / Biotype gravis) GN=mshB PE=3 SV=1
Length = 293
Score = 33.1 bits (74), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 27/145 (18%)
Query: 42 VLLVIAHPDDESMFFSPTINYLTSRRHNLHILC----------------MSNGNADGMGN 85
+ V AHPDDE+++ + L +R ++ ++ ++N NAD +G
Sbjct: 9 AVAVHAHPDDEAIWTGGLLANLAARGADVTVVTCTLGEEGEVIGEPYQGLTNKNADQLGG 68
Query: 86 IRKDELHRACAVLKIPLEQVKVLD-------LVDFQDGFDKLW---NHKSLAKIVEEEVV 135
R ELH++ ++L + E + + D + + + KS+ ++ E
Sbjct: 69 FRIHELHKSLSLLGVRGEFLGGAGCWRDSGMIGDPANEHPRAFISSGDKSIEQLT-EIFE 127
Query: 136 NCSIDLIITFDNYGVSGHCNHRDVH 160
DL+IT+ G GH +H H
Sbjct: 128 RLQPDLVITYGPDGGYGHPDHIRAH 152
>sp|A0R2I7|MSHB_MYCS2 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Mycobacterium smegmatis (strain ATCC
700084 / mc(2)155) GN=mshB PE=3 SV=1
Length = 290
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 59/162 (36%), Gaps = 44/162 (27%)
Query: 34 LTTGDKKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNGN-------------- 79
+++ + +L V AHPDDE++ TI + +R +H++ + G
Sbjct: 1 MSSHESPRLLFVHAHPDDETLTTGGTIAHYVARSAEVHVVTCTLGEEGEVIGERYAQLAV 60
Query: 80 --ADGMGNIRKDELHRACAVLKIPLEQVKVLDLVDFQDGFDKLWNHKSLAKIVE------ 131
AD +G R EL A+ + L + L G W +A
Sbjct: 61 DHADQLGGYRIAEL--TAALQSLGLRGPRYL-------GGAGHWRDSGMAGTPSRGRQRW 111
Query: 132 -----EEVVNCSIDLI--------ITFDNYGVSGHCNHRDVH 160
+E V + +I +T+D G GH +H H
Sbjct: 112 VDADLDEAVGALVAVIGEVRPHVVVTYDPNGGYGHPDHIQTH 153
>sp|A0PMQ6|MSHB_MYCUA 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Mycobacterium ulcerans (strain Agy99)
GN=mshB PE=3 SV=1
Length = 301
Score = 32.7 bits (73), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 54/145 (37%), Gaps = 26/145 (17%)
Query: 38 DKKNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNGN----------------AD 81
+ +L V AHPDDES+ TI + +R +H++ + G AD
Sbjct: 3 ETPRLLFVHAHPDDESLSNGATIAHYAARGAQVHVVTCTLGEEGEVIGDRWAQLAVDHAD 62
Query: 82 GMGNIRKDELHRACAVLKI--PLEQVKVLDLVDFQDGFDKLWNHKSLAKIVEEEVVNCSI 139
+G R EL A L + P+ D + + + + E V +
Sbjct: 63 QLGGYRIGELTAALQRLGVDAPIYLGGAGRWRDSGMAGTEQRSRRRFVDADDREAVGALV 122
Query: 140 DLI--------ITFDNYGVSGHCNH 156
+I +T+D G GH +H
Sbjct: 123 AIIRELRPHVVVTYDPDGGYGHPDH 147
>sp|Q9JJ79|DYHC2_RAT Cytoplasmic dynein 2 heavy chain 1 OS=Rattus norvegicus GN=Dync2h1
PE=1 SV=1
Length = 4306
Score = 32.7 bits (73), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 55 FFSPTINYLTSR-RHNLHI-LCMSNGNADGMGNIRKDE-LHRACAVL 98
FF P NY T R + NLHI L M + N + + N + LH+ C VL
Sbjct: 2760 FFGPVFNYFTYRIQQNLHIVLIMDSANLNFIINCESNPALHKKCRVL 2806
>sp|A8L1A5|MSHB_FRASN 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Frankia sp. (strain EAN1pec) GN=mshB PE=3
SV=1
Length = 305
Score = 32.7 bits (73), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 62/163 (38%), Gaps = 36/163 (22%)
Query: 39 KKNVLLVIAHPDDESMFFSPTINYLTSRR--HNLHILC---------------MSNGNAD 81
+ VL V AHPDDE + T+ +R H + C + + D
Sbjct: 11 PRRVLFVHAHPDDEVISTGVTMASYAARPDTHVTLVTCTLGEVGEVLVPELINLRSDLGD 70
Query: 82 GMGNIRKDELHRACAVLKIPLEQV-------KVLDLVDFQDGFDK--LWN------HKSL 126
+G R EL R+CA L + + + ++D D LW +L
Sbjct: 71 QLGGYRIGELDRSCAELGVTDHRFLGGAGRWRDSGMIDTPANDDPRCLWRADLDEASAAL 130
Query: 127 AKIVEEEVVNCSIDLIITFDNYGVSGHCNHRDVHHGICRSYLN 169
++V E +++T+D G GH +H H R++ +
Sbjct: 131 VQVVRE----VRPQVLVTYDENGAYGHPDHIRAHDVSVRAFAD 169
>sp|Q8AB53|Y258_BACTN Putative glucosamine-6-phosphate deaminase-like protein BT_0258
OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM
2079 / NCTC 10582 / E50 / VPI-5482) GN=BT_0258 PE=3 SV=1
Length = 663
Score = 32.3 bits (72), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/120 (20%), Positives = 51/120 (42%), Gaps = 26/120 (21%)
Query: 40 KNVLLVIAHPDDESMFFSPTINYLTSRRHNLHILCMSNGNADGMGNIRKDELHRACAVLK 99
K V++ HPDD+ + T+ L ++H +H+ ++GN
Sbjct: 378 KRVVIFSPHPDDDVISMGGTLRRLVEQKHEVHVAYETSGN-------------------- 417
Query: 100 IPLEQVKVLDLVDFQDGFDKLWNHKSLAKIVEEEVVNCSIDLIITFDNYGVSGHCNHRDV 159
I + +V+ + F +GF++++N+ E+ V++ I F G + RD+
Sbjct: 418 IAVGDEEVVRFMHFINGFNQIFNNS------EDLVISEKYAEIRKFLKEKKDGDMDSRDI 471
>sp|A4XB95|MSHB_SALTO 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside
deacetylase OS=Salinispora tropica (strain ATCC BAA-916
/ DSM 44818 / CNB-440) GN=mshB PE=3 SV=1
Length = 314
Score = 32.3 bits (72), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 72/187 (38%), Gaps = 34/187 (18%)
Query: 34 LTTGDKKNVLLVIAHPDDESMFFSPTI-NYLTSRRHNLHILCMSNGNAD----------- 81
+TT + +LLV AHPDDE++ T+ +Y + H + C +
Sbjct: 1 MTTLPARRLLLVHAHPDDEAIGTGATMAHYAATGAHVTLVTCTLGEEGEVHVPELAQLAA 60
Query: 82 ----GMGNIRKDELHRACAVLKIPLEQVKVLDLVDFQD-GFDKLWNHK------------ 124
+G R EL AC L + + + ++D G L ++
Sbjct: 61 AEADQLGGYRIGELAAACRALGV-TDHRFLGGAGRYRDSGMMGLATNEHPRAFWQADLDV 119
Query: 125 SLAKIVEEEVVNCSIDLIITFDNYGVSGHCNHRDVHHGICRSYLNGTSERNIEA---WEL 181
+ ++V E + ++IT+D G GH +H H R++ +E A W
Sbjct: 120 AAGQLV-EVMRELQPQVLITYDGNGFYGHPDHIQAHRVAMRAHELAAAEGFAPAKVYWTA 178
Query: 182 MTTNILR 188
M ++L
Sbjct: 179 MPQSVLE 185
>sp|Q4A9G1|EFTU_MYCHJ Elongation factor Tu OS=Mycoplasma hyopneumoniae (strain J / ATCC
25934 / NCTC 10110) GN=tuf PE=3 SV=1
Length = 402
Score = 32.3 bits (72), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 79/202 (39%), Gaps = 48/202 (23%)
Query: 60 INYLTSRRHNLHILCMSNGNADGMGNIRKDELHRACAVLKI-----PL----------EQ 104
I Y T +RH H+ C G+AD + N+ A+L + P+ +Q
Sbjct: 74 IEYSTDKRHYAHVDC--PGHADYIKNMITGAAQMDGAILVVAATDGPMPQTREHILLSKQ 131
Query: 105 VKVLDLVDFQDGFDKLWNHKSLAKIVEEEVVNCSIDLIITFDNYGVSGHCNHRDVHHGIC 164
V V +V F + D L + + +VE E+ +L+ ++D G ++ + G
Sbjct: 132 VGVPKMVVFLNKIDLLEGEEEMVDLVEVEIR----ELLSSYDFDG-----DNTPIIRGSA 182
Query: 165 RSYLNGTSERNIEAWELMTT------NILRKYSGPL-----DIWL----SILSATQYRRG 209
R L G E + ELM + +R+ P D++ ++ + RG
Sbjct: 183 RGALEGKPEWEAKVLELMDAVDSYIDSPVREMDKPFLMAVEDVFTITGRGTVATGKVERG 242
Query: 210 QVH-------CLLNEHPKKSFL 224
QV E PKK+ +
Sbjct: 243 QVKLNEEVEIVGYREEPKKTVI 264
>sp|Q4A7K0|EFTU_MYCH7 Elongation factor Tu OS=Mycoplasma hyopneumoniae (strain 7448)
GN=tuf PE=3 SV=1
Length = 402
Score = 32.0 bits (71), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 79/202 (39%), Gaps = 48/202 (23%)
Query: 60 INYLTSRRHNLHILCMSNGNADGMGNIRKDELHRACAVLKI-----PL----------EQ 104
I Y T +RH H+ C G+AD + N+ A+L + P+ +Q
Sbjct: 74 IEYSTDKRHYAHVDC--PGHADYIKNMITGAAQMDGAILVVAATDGPMPQTREHILLSKQ 131
Query: 105 VKVLDLVDFQDGFDKLWNHKSLAKIVEEEVVNCSIDLIITFDNYGVSGHCNHRDVHHGIC 164
V V +V F + D L + + +VE E+ +L+ ++D G ++ + G
Sbjct: 132 VGVPKMVVFLNKIDLLEGEEEMVDLVEVEIR----ELLSSYDFDG-----DNTPIIRGSA 182
Query: 165 RSYLNGTSERNIEAWELMTT------NILRKYSGPL-----DIWL----SILSATQYRRG 209
R L G E + ELM + +R+ P D++ ++ + RG
Sbjct: 183 RGALEGKPEWEAKVLELMDAVDSYIDSPVREMDKPFLMAVEDVFTITGRGTVATGKVERG 242
Query: 210 QVH-------CLLNEHPKKSFL 224
QV E PKK+ +
Sbjct: 243 QVKLNEEVEIVGYREEPKKTVI 264
>sp|Q600B6|EFTU_MYCH2 Elongation factor Tu OS=Mycoplasma hyopneumoniae (strain 232)
GN=tuf PE=3 SV=1
Length = 402
Score = 32.0 bits (71), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 79/202 (39%), Gaps = 48/202 (23%)
Query: 60 INYLTSRRHNLHILCMSNGNADGMGNIRKDELHRACAVLKI-----PL----------EQ 104
I Y T +RH H+ C G+AD + N+ A+L + P+ +Q
Sbjct: 74 IEYSTDKRHYAHVDC--PGHADYIKNMITGAAQMDGAILVVAATDGPMPQTREHILLSKQ 131
Query: 105 VKVLDLVDFQDGFDKLWNHKSLAKIVEEEVVNCSIDLIITFDNYGVSGHCNHRDVHHGIC 164
V V +V F + D L + + +VE E+ +L+ ++D G ++ + G
Sbjct: 132 VGVPKMVVFLNKIDLLEGEEEMVDLVEVEIR----ELLSSYDFDG-----DNTPIIRGSA 182
Query: 165 RSYLNGTSERNIEAWELMTT------NILRKYSGPL-----DIWL----SILSATQYRRG 209
R L G E + ELM + +R+ P D++ ++ + RG
Sbjct: 183 RGALEGKPEWEAKVLELMDAVDSYIDSPVREMDKPFLMAVEDVFTITGRGTVATGKVERG 242
Query: 210 QVH-------CLLNEHPKKSFL 224
QV E PKK+ +
Sbjct: 243 QVKLNEEVEIVGYREEPKKTVI 264
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.135 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,345,462
Number of Sequences: 539616
Number of extensions: 4017765
Number of successful extensions: 8413
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 8357
Number of HSP's gapped (non-prelim): 66
length of query: 257
length of database: 191,569,459
effective HSP length: 115
effective length of query: 142
effective length of database: 129,513,619
effective search space: 18390933898
effective search space used: 18390933898
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)