BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025127
(257 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P58223|Y4837_ARATH KH domain-containing protein At4g18375 OS=Arabidopsis thaliana
GN=At4g18375 PE=2 SV=1
Length = 606
Score = 77.8 bits (190), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 105/211 (49%), Gaps = 18/211 (8%)
Query: 50 VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIIS--------- 100
V++RI+ P +G VIGK G I IR TKA IK+ D + +RVI I
Sbjct: 36 VVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEE 95
Query: 101 ---SKDNDNVVSDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCL 157
+K + + A++AL ++ I+ D+ N+ + V RLL+ SQ+ L
Sbjct: 96 IGFTKSENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDD--NKECRLLVPFSQSSSL 153
Query: 158 IGMSGQNIEKLRNSSGATIVILAPN-QLPLCASAHESDRVVQISGDVPAVLNALVEIGNQ 216
IG +G+NI+++R + A++ +++ + P A E D VV ISG+ +V AL +
Sbjct: 154 IGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAI 213
Query: 217 LRENPPRQVISISPAYNYSAIRPAQPFVEPT 247
+ + PR+ I P + S PA + P+
Sbjct: 214 MYKINPRENI---PLDSTSQDVPAASVIVPS 241
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 102/178 (57%), Gaps = 24/178 (13%)
Query: 45 AKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIAR--HEERVIIISSK 102
+++++++F+++ P I +VIGK G I++IRE + + I++ D+ + +E VII+++
Sbjct: 307 SRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTAT 366
Query: 103 DNDNVVSDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSG 162
++ D ++ A L+L++ ++ +A V ++LL++ GC+IG SG
Sbjct: 367 ES----PDDMKSMAVEAVLLLQEYINDEDAENV--------KMQLLVSSKVIGCVIGKSG 414
Query: 163 QNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLREN 220
I ++R + A I C S + D +V++SG+V +V +AL++I +LRE+
Sbjct: 415 SVINEIRKRTNANI----------CISKGKKDDLVEVSGEVSSVRDALIQIVLRLRED 462
Score = 32.7 bits (73), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%)
Query: 52 FRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIIS 100
I++P+ + KV+GK G ++ IR + A I+I+ + H + + ++S
Sbjct: 538 LEILIPAHAMSKVMGKGGGNLENIRRISGAMIEISASKTSHGDHIALLS 586
>sp|P57721|PCBP3_HUMAN Poly(rC)-binding protein 3 OS=Homo sapiens GN=PCBP3 PE=2 SV=2
Length = 371
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 95/174 (54%), Gaps = 15/174 (8%)
Query: 50 VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVS 109
+ R+++ +++G +IGK+G ++K+REE+ A I I++ ER++ I+ +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITGP------T 97
Query: 110 DAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLR 169
DA + A ++D NS ++ A T+RL++ SQ G LIG G I+++R
Sbjct: 98 DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPV-TLRLVVPASQCGSLIGKGGSKIKEIR 156
Query: 170 NSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPR 223
S+GA + + A + LP + ++R V ISG A++ + +I + E+PP+
Sbjct: 157 ESTGAQVQV-AGDMLP-----NSTERAVTISGTPDAIIQCVKQICVVMLESPPK 204
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
Query: 133 SKVAAGHVAAN-TIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAH 191
SKV+ G + TIRLL+ G + G +IG G+ ++K+R SGA I I N C
Sbjct: 35 SKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP--- 87
Query: 192 ESDRVVQISGDVPAVLNALVEIGNQLREN 220
+R+V I+G A+ A I + E+
Sbjct: 88 --ERIVTITGPTDAIFKAFAMIAYKFEED 114
Score = 38.9 bits (89), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 54 IIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIIS 100
+ +P+ IG +IG++G +I +IR+ + A IKIA+A ER I I+
Sbjct: 298 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 344
>sp|P57722|PCBP3_MOUSE Poly(rC)-binding protein 3 OS=Mus musculus GN=Pcbp3 PE=2 SV=3
Length = 371
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 95/174 (54%), Gaps = 15/174 (8%)
Query: 50 VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVS 109
+ R+++ +++G +IGK+G ++K+REE+ A I I++ ER++ I+ +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITGP------T 97
Query: 110 DAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLR 169
DA + A ++D NS ++ A T+RL++ SQ G LIG G I+++R
Sbjct: 98 DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPV-TLRLVVPASQCGSLIGKGGSKIKEIR 156
Query: 170 NSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPR 223
S+GA + + A + LP + ++R V ISG A++ + +I + E+PP+
Sbjct: 157 ESTGAQVQV-AGDMLP-----NSTERAVTISGTPDAIIQCVKQICVVMLESPPK 204
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
Query: 133 SKVAAGHVAAN-TIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAH 191
SKV+ G + TIRLL+ G + G +IG G+ ++K+R SGA I I N C
Sbjct: 35 SKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP--- 87
Query: 192 ESDRVVQISGDVPAVLNALVEIGNQLREN 220
+R+V I+G A+ A I + E+
Sbjct: 88 --ERIVTITGPTDAIFKAFAMIAYKFEED 114
Score = 38.9 bits (89), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 54 IIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIIS 100
+ +P+ IG +IG++G +I +IR+ + A IKIA+A ER I I+
Sbjct: 298 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 344
>sp|Q61990|PCBP2_MOUSE Poly(rC)-binding protein 2 OS=Mus musculus GN=Pcbp2 PE=1 SV=1
Length = 362
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 100/179 (55%), Gaps = 21/179 (11%)
Query: 50 VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVS 109
+ R+++ +++G +IGK+G ++K+REE+ A I I++ ER+I ++ N
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN----- 66
Query: 110 DAENALQQIAALI---LKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIE 166
A+ + A+I L++D S+S + AA T+RL++ SQ G LIG G I+
Sbjct: 67 ----AIFKAFAMIIDKLEEDISSSMTNSTAASRPPV-TLRLVVPASQCGSLIGKGGCKIK 121
Query: 167 KLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPRQV 225
++R S+GA + + A + LP + ++R + I+G +++ + +I + E+PP+ V
Sbjct: 122 EIRESTGAQVQV-AGDMLP-----NSTERAITIAGIPQSIIECVKQICVVMLESPPKGV 174
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 14/96 (14%)
Query: 144 TIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDV 203
TIRLL+ G + G +IG G++++K+R SGA I I N C +R++ ++G
Sbjct: 15 TIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN----CP-----ERIITLAGPT 65
Query: 204 PAVLNALVEIGNQLRENPPRQVISISPAYNYSAIRP 239
A+ A I ++L E+ IS S + +A RP
Sbjct: 66 NAIFKAFAMIIDKLEED-----ISSSMTNSTAASRP 96
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%)
Query: 35 EIEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEE 94
E++G A AQ + +P+ IG +IG++G +I +IR+ + A IKIA+ + +
Sbjct: 270 EVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTD 329
Query: 95 RVIIIS 100
R + I+
Sbjct: 330 RQVTIT 335
>sp|Q5SF07|IF2B2_MOUSE Insulin-like growth factor 2 mRNA-binding protein 2 OS=Mus musculus
GN=Igf2bp2 PE=1 SV=1
Length = 592
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 110/230 (47%), Gaps = 33/230 (14%)
Query: 16 VTEPEPRHDVSGKRRREDGEIEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKI 75
V+ P P H R RE G GS +A+ D RI+VP++ +G +IGKEG I+ I
Sbjct: 160 VSSPSPPH-----RAREQGHGPGSS--SQARQIDFPLRILVPTQFVGAIIGKEGLTIKNI 212
Query: 76 REETKATIKI--ADAIARHEERVIIISSKDNDNVVSDAENALQQIAALILKDDDSNSEAS 133
++T++ + I + E+ V I ++ + + A + I ++ K+ D A
Sbjct: 213 TKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS------EACRMILEIMQKEADETKLAE 266
Query: 134 KVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHES 193
+V +++L G LIG G+N++K+ + +G I I + L S +
Sbjct: 267 EVP--------LKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSLQDL----SIYNP 314
Query: 194 DRVVQISGDVPAVLNALVEIGNQLRENPPRQVISIS------PAYNYSAI 237
+R + + G + A NA +EI +LRE +++++ P N SA+
Sbjct: 315 ERTITVRGTIEACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSAL 364
Score = 39.3 bits (90), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 61/126 (48%), Gaps = 13/126 (10%)
Query: 54 IIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARH-EERVIIISSKDNDNVVSDAE 112
+ +P++ +G +IGK+G I+++ A+IKIA A ER++II+
Sbjct: 425 LFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQF----- 479
Query: 113 NALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLRNSS 172
A +I + +++ N + H+ + S AG +IG G+ + +L+N +
Sbjct: 480 KAQGRIFGKLKEENFFNPKEEVKLEAHIR-------VPSSTAGRVIGKGGKTVNELQNLT 532
Query: 173 GATIVI 178
A +++
Sbjct: 533 SAEVIV 538
>sp|Q15366|PCBP2_HUMAN Poly(rC)-binding protein 2 OS=Homo sapiens GN=PCBP2 PE=1 SV=1
Length = 365
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 100/183 (54%), Gaps = 25/183 (13%)
Query: 50 VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVS 109
+ R+++ +++G +IGK+G ++K+REE+ A I I++ ER+I ++ N
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN----- 66
Query: 110 DAENALQQIAALI---LKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIE 166
A+ + A+I L++D S+S + AA T+RL++ SQ G LIG G I+
Sbjct: 67 ----AIFKAFAMIIDKLEEDISSSMTNSTAASRPPV-TLRLVVPASQCGSLIGKGGCKIK 121
Query: 167 KLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIG----NQLRENPP 222
++R S+GA + + A + LP + ++R + I+G +++ + +I L ++PP
Sbjct: 122 EIRESTGAQVQV-AGDMLP-----NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPP 175
Query: 223 RQV 225
+ V
Sbjct: 176 KGV 178
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 14/96 (14%)
Query: 144 TIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDV 203
TIRLL+ G + G +IG G++++K+R SGA I I N C +R++ ++G
Sbjct: 15 TIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN----CP-----ERIITLAGPT 65
Query: 204 PAVLNALVEIGNQLRENPPRQVISISPAYNYSAIRP 239
A+ A I ++L E+ IS S + +A RP
Sbjct: 66 NAIFKAFAMIIDKLEED-----ISSSMTNSTAASRP 96
Score = 40.4 bits (93), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 36 IEGSDPKRR------AKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAI 89
IE S P+ + A AQ + +P+ IG +IG++G +I +IR+ + A IKIA+ +
Sbjct: 268 IESSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPV 327
Query: 90 ARHEERVIIIS 100
+R + I+
Sbjct: 328 EGSTDRQVTIT 338
>sp|Q0VCU0|PCBP4_BOVIN Poly(rC)-binding protein 4 OS=Bos taurus GN=PCBP4 PE=2 SV=1
Length = 403
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 94/174 (54%), Gaps = 19/174 (10%)
Query: 52 FRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVSDA 111
R+++ +++G +IGK+G +++IRE++ A I I++ S + ++ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG-----------SCPERITTITGS 68
Query: 112 ENALQQIAALILKDDDSNSEASKVAAGHVA--ANTIRLLIAGSQAGCLIGMSGQNIEKLR 169
A+ ++I D + A+ G+V+ T+RL+I SQ G LIG +G I+++R
Sbjct: 69 TAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 170 NSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPR 223
++GA + + A + LP + ++R V +SG A++ + +I + E+PP+
Sbjct: 129 ETTGAQVQV-AGDLLP-----NSTERAVTVSGVPDAIILCVRQICAVILESPPK 176
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 71/141 (50%), Gaps = 14/141 (9%)
Query: 50 VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA-DAIARHEERVIIISSKDNDNVV 108
V R+++P+ Q G +IGK G +I++IRE T A +++A D + ER + +S + ++
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIIL 161
Query: 109 SDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQ----N 164
++QI A+IL+ + H + + +L++ +Q + G G
Sbjct: 162 -----CVRQICAVILESPPKGATIPY----HPSLSLGTVLLSTNQGFSVQGQYGTVTPAE 212
Query: 165 IEKLRNSSGATIVILAPNQLP 185
+ KL+ SG + +P+ +P
Sbjct: 213 VTKLQQLSGHAVPFASPSMVP 233
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 36 IEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEER 95
+ G DP + +Q+ L VP+ IG VIG++G +I +IR+ + A IKI + ER
Sbjct: 232 VPGLDPSTQTSSQEFL----VPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGER 287
Query: 96 VIIIS 100
+ I+
Sbjct: 288 HVTIT 292
Score = 38.9 bits (89), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 144 TIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDV 203
T+R+L+ G + G +IG G+ ++++R S A I I + +R+ I+G
Sbjct: 19 TLRMLMHGKEVGSIIGKKGETVKRIREQSSARITI---------SEGSCPERITTITGST 69
Query: 204 PAVLNALVEIGNQLREN 220
AV +A+ I +L E+
Sbjct: 70 AAVFHAVSMIAFKLDED 86
>sp|P57723|PCBP4_HUMAN Poly(rC)-binding protein 4 OS=Homo sapiens GN=PCBP4 PE=2 SV=1
Length = 403
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 94/174 (54%), Gaps = 19/174 (10%)
Query: 52 FRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVSDA 111
R+++ +++G +IGK+G +++IRE++ A I I++ S + ++ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG-----------SCPERITTITGS 68
Query: 112 ENALQQIAALILKDDDSNSEASKVAAGHVA--ANTIRLLIAGSQAGCLIGMSGQNIEKLR 169
A+ ++I D + A+ G+V+ T+RL+I SQ G LIG +G I+++R
Sbjct: 69 TAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 170 NSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPR 223
++GA + + A + LP + ++R V +SG A++ + +I + E+PP+
Sbjct: 129 ETTGAQVQV-AGDLLP-----NSTERAVTVSGVPDAIILCVRQICAVILESPPK 176
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 50 VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA-DAIARHEERVIIISSKDNDNVV 108
V R+++P+ Q G +IGK G +I++IRE T A +++A D + ER + +S + ++
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIIL 161
Query: 109 SDAENALQQIAALILKD 125
++QI A+IL+
Sbjct: 162 -----CVRQICAVILES 173
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 36 IEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEER 95
+ G DP + +Q+ L VP+ IG VIG++G +I +IR+ + A IKI + ER
Sbjct: 232 VPGLDPGTQTSSQEFL----VPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGER 287
Query: 96 VIIIS 100
+ I+
Sbjct: 288 HVTIT 292
Score = 38.9 bits (89), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 14/96 (14%)
Query: 144 TIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDV 203
T+R+L+ G + G +IG G+ ++++R S A I I + +R+ I+G
Sbjct: 19 TLRMLMHGKEVGSIIGKKGETVKRIREQSSARITI---------SEGSCPERITTITGST 69
Query: 204 PAVLNALVEIGNQLRENPPRQVISISPAYNYSAIRP 239
AV +A+ I +L E+ + +PA + RP
Sbjct: 70 AAVFHAVSMIAFKLDED-----LCAAPANGGNVSRP 100
>sp|P57724|PCBP4_MOUSE Poly(rC)-binding protein 4 OS=Mus musculus GN=Pcbp4 PE=2 SV=1
Length = 403
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 93/174 (53%), Gaps = 19/174 (10%)
Query: 52 FRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVSDA 111
R+++ +++G +IGK+G +++IRE++ A I I++ S + ++ +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG-----------SCPERITTITGS 68
Query: 112 ENALQQIAALILKDDDSNSEASKVAAGHVA--ANTIRLLIAGSQAGCLIGMSGQNIEKLR 169
A+ ++I D + A+ G V+ T+RL+I SQ G LIG +G I+++R
Sbjct: 69 TAAVFHAVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 170 NSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPR 223
++GA + + A + LP + ++R V +SG A++ + +I + E+PP+
Sbjct: 129 ETTGAQVQV-AGDLLP-----NSTERAVTVSGVPDAIILCVRQICAVILESPPK 176
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 71/141 (50%), Gaps = 14/141 (9%)
Query: 50 VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA-DAIARHEERVIIISSKDNDNVV 108
V R+++P+ Q G +IGK G +I++IRE T A +++A D + ER + +S + ++
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIIL 161
Query: 109 SDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSG----QN 164
++QI A+IL+ + H + + +L++ +Q + G G
Sbjct: 162 -----CVRQICAVILESPPKGATIPY----HPSLSLGTVLLSANQGFSVQGQYGAVTPAE 212
Query: 165 IEKLRNSSGATIVILAPNQLP 185
+ KL+ SG + +P+ +P
Sbjct: 213 VTKLQQLSGHAVPFASPSVVP 233
Score = 40.8 bits (94), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 36 IEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEER 95
+ G DP + +Q+ L VP+ IG VIG++G +I +IR+ + A IKI + ER
Sbjct: 232 VPGMDPSTQTSSQEFL----VPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGER 287
Query: 96 VIIIS 100
+ I+
Sbjct: 288 HVTIT 292
Score = 40.4 bits (93), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 14/96 (14%)
Query: 144 TIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDV 203
T+R+L+ G + G +IG G+ ++++R S A I I + +R+ I+G
Sbjct: 19 TLRMLMHGKEVGSIIGKKGETVKRIREQSSARITI---------SEGSCPERITTITGST 69
Query: 204 PAVLNALVEIGNQLRENPPRQVISISPAYNYSAIRP 239
AV +A+ I +L E+ + +PA S RP
Sbjct: 70 AAVFHAVSMIAFKLDED-----LCAAPANGGSVSRP 100
>sp|O19048|PCBP1_RABIT Poly(rC)-binding protein 1 OS=Oryctolagus cuniculus GN=PCBP1 PE=2
SV=1
Length = 356
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 99/185 (53%), Gaps = 23/185 (12%)
Query: 50 VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVS 109
+ R+++ +++G +IGK+G +++IREE+ A I I++ ER+I ++ N
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN----- 66
Query: 110 DAENALQQIAALILK--DDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEK 167
A+ + A+I+ ++D NS + A T+RL++ +Q G LIG G I++
Sbjct: 67 ----AIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKE 122
Query: 168 LRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIG----NQLRENPPR 223
+R S+GA + + A + LP + ++R + I+G +V + +I L ++P
Sbjct: 123 IRESTGAQVQV-AGDMLP-----NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQG 176
Query: 224 QVISI 228
+V++I
Sbjct: 177 RVMTI 181
Score = 35.0 bits (79), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 35 EIEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEE 94
E++G A Q + +P+ IG +IG++G I +IR+ + A IKIA+ +
Sbjct: 266 EVKGYWASLDASTQTT-HELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSG 324
Query: 95 RVIIIS 100
R + I+
Sbjct: 325 RQVTIT 330
Score = 30.8 bits (68), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Query: 143 NTIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGD 202
T L I + GC+IG G NI ++R SGA I I P + S R V I+G
Sbjct: 280 TTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVE-------GSSGRQVTITGS 332
Query: 203 VPAV 206
++
Sbjct: 333 AASI 336
>sp|P60335|PCBP1_MOUSE Poly(rC)-binding protein 1 OS=Mus musculus GN=Pcbp1 PE=1 SV=1
Length = 356
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 99/185 (53%), Gaps = 23/185 (12%)
Query: 50 VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVS 109
+ R+++ +++G +IGK+G +++IREE+ A I I++ ER+I ++ N
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN----- 66
Query: 110 DAENALQQIAALILK--DDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEK 167
A+ + A+I+ ++D NS + A T+RL++ +Q G LIG G I++
Sbjct: 67 ----AIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKE 122
Query: 168 LRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIG----NQLRENPPR 223
+R S+GA + + A + LP + ++R + I+G +V + +I L ++P
Sbjct: 123 IRESTGAQVQV-AGDMLP-----NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQG 176
Query: 224 QVISI 228
+V++I
Sbjct: 177 RVMTI 181
Score = 35.0 bits (79), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 35 EIEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEE 94
E++G A Q + +P+ IG +IG++G I +IR+ + A IKIA+ +
Sbjct: 266 EVKGYWASLDASTQTT-HELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSG 324
Query: 95 RVIIIS 100
R + I+
Sbjct: 325 RQVTIT 330
Score = 30.8 bits (68), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Query: 143 NTIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGD 202
T L I + GC+IG G NI ++R SGA I I P + S R V I+G
Sbjct: 280 TTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVE-------GSSGRQVTITGS 332
Query: 203 VPAV 206
++
Sbjct: 333 AASI 336
>sp|Q15365|PCBP1_HUMAN Poly(rC)-binding protein 1 OS=Homo sapiens GN=PCBP1 PE=1 SV=2
Length = 356
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 99/185 (53%), Gaps = 23/185 (12%)
Query: 50 VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVS 109
+ R+++ +++G +IGK+G +++IREE+ A I I++ ER+I ++ N
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN----- 66
Query: 110 DAENALQQIAALILK--DDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEK 167
A+ + A+I+ ++D NS + A T+RL++ +Q G LIG G I++
Sbjct: 67 ----AIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKE 122
Query: 168 LRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIG----NQLRENPPR 223
+R S+GA + + A + LP + ++R + I+G +V + +I L ++P
Sbjct: 123 IRESTGAQVQV-AGDMLP-----NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQG 176
Query: 224 QVISI 228
+V++I
Sbjct: 177 RVMTI 181
Score = 35.0 bits (79), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 35 EIEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEE 94
E++G A Q + +P+ IG +IG++G I +IR+ + A IKIA+ +
Sbjct: 266 EVKGYWASLDASTQTT-HELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSG 324
Query: 95 RVIIIS 100
R + I+
Sbjct: 325 RQVTIT 330
Score = 30.8 bits (68), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Query: 143 NTIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGD 202
T L I + GC+IG G NI ++R SGA I I P + S R V I+G
Sbjct: 280 TTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVE-------GSSGRQVTITGS 332
Query: 203 VPAV 206
++
Sbjct: 333 AASI 336
>sp|Q5E9A3|PCBP1_BOVIN Poly(rC)-binding protein 1 OS=Bos taurus GN=PCBP1 PE=2 SV=1
Length = 356
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 99/185 (53%), Gaps = 23/185 (12%)
Query: 50 VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVS 109
+ R+++ +++G +IGK+G +++IREE+ A I I++ ER+I ++ N
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN----- 66
Query: 110 DAENALQQIAALILK--DDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEK 167
A+ + A+I+ ++D NS + A T+RL++ +Q G LIG G I++
Sbjct: 67 ----AIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKE 122
Query: 168 LRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIG----NQLRENPPR 223
+R S+GA + + A + LP + ++R + I+G +V + +I L ++P
Sbjct: 123 IRESTGAQVQV-AGDMLP-----NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQG 176
Query: 224 QVISI 228
+V++I
Sbjct: 177 RVMTI 181
Score = 35.0 bits (79), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 35 EIEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEE 94
E++G A Q + +P+ IG +IG++G I +IR+ + A IKIA+ +
Sbjct: 266 EVKGYWASLDASTQTT-HELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSG 324
Query: 95 RVIIIS 100
R + I+
Sbjct: 325 RQVTIT 330
Score = 30.8 bits (68), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Query: 143 NTIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGD 202
T L I + GC+IG G NI ++R SGA I I P + S R V I+G
Sbjct: 280 TTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVE-------GSSGRQVTITGS 332
Query: 203 VPAV 206
++
Sbjct: 333 AASI 336
>sp|Q5RB68|IF2B2_PONAB Insulin-like growth factor 2 mRNA-binding protein 2 OS=Pongo abelii
GN=IGF2BP2 PE=2 SV=1
Length = 556
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 104/216 (48%), Gaps = 23/216 (10%)
Query: 31 REDGEIEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKI--ADA 88
RE G G +A+ D RI+VP++ +G +IGKEG I+ I ++T++ + I +
Sbjct: 177 REQGHAPGGT--SQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN 234
Query: 89 IARHEERVIIISSKDNDNVVSDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLL 148
E+ V I ++ + + A + I ++ K+ D A ++ +++L
Sbjct: 235 SGAAEKPVTIHATPEGTS------EACRMILEIMQKEADETKLAEEIP--------LKIL 280
Query: 149 IAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLN 208
G LIG G+N++K+ + +G I I + L S + +R + + G V A +
Sbjct: 281 AHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL----SIYNPERTITVKGTVEACAS 336
Query: 209 ALVEIGNQLRENPPRQVISISPAYNY-SAIRPAQPF 243
A +EI +LRE +++++ Y S++ P F
Sbjct: 337 AEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQF 372
Score = 40.0 bits (92), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 13/142 (9%)
Query: 38 GSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARH-EERV 96
G P + + + + +P++ +G +IGK+G I+++ A+IKIA A ER+
Sbjct: 373 GPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERM 432
Query: 97 IIISSKDNDNVVSDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGC 156
+II+ A +I + +++ N + H+ + S AG
Sbjct: 433 VIITGPPEAQF-----KAQGRIFGKLKEENFFNPKEEVKLEAHIR-------VPSSTAGR 480
Query: 157 LIGMSGQNIEKLRNSSGATIVI 178
+IG G+ + +L+N + A +++
Sbjct: 481 VIGKGGKTVNELQNLTSAEVIV 502
>sp|Q5ZIQ3|HNRPK_CHICK Heterogeneous nuclear ribonucleoprotein K OS=Gallus gallus
GN=HNRNPK PE=2 SV=1
Length = 427
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 21/198 (10%)
Query: 24 DVSGKRRREDGEIEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATI 83
+ +GKR ED E E + + R + V RI++ S+ G VIGK G I+ +R + A++
Sbjct: 14 ETNGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASV 73
Query: 84 KIADAIARHEERVIIISSKDNDNVVSDAENALQQIAALILKDDDSNSEASKVAAGHVAAN 143
+ D+ ER++ IS +D E + + +I E + G
Sbjct: 74 SVPDSSG--PERILSIS--------ADTETIGEILKKII-----PTLEEYQHYKGSDFDC 118
Query: 144 TIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDV 203
+RLLI S AG +IG+ G I++LR ++ TI + H +DRVV I G
Sbjct: 119 ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE------CCPHSTDRVVLIGGKP 172
Query: 204 PAVLNALVEIGNQLRENP 221
V+ + I + + E+P
Sbjct: 173 DRVVECIKIILDLISESP 190
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 53 RIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDN--DNVVSD 110
++ +P G +IGK G RI++IR E+ A+IKI + + E+R+I I+ + N
Sbjct: 355 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYL 414
Query: 111 AENALQQIAALIL 123
+N+++Q +
Sbjct: 415 LQNSVKQYSGKFF 427
Score = 36.2 bits (82), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 144 TIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDV 203
T ++ I AG +IG GQ I+++R+ SGA+I I PL S DR++ I+G
Sbjct: 353 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGS---EDRIITITGTQ 405
Query: 204 PAVLNALVEIGNQLRE 219
+ NA + N +++
Sbjct: 406 DQIQNAQYLLQNSVKQ 421
>sp|P61980|HNRPK_RAT Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus
GN=Hnrnpk PE=1 SV=1
Length = 463
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 27 GKRRREDGEIEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA 86
GKR ED E E + + R + V RI++ S+ G VIGK G I+ +R + A++ +
Sbjct: 20 GKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVP 79
Query: 87 DAIARHEERVIIISSKDN------DNVVSDAENALQ-----QIAALILKDDDSNSEASKV 135
D+ ER++ IS+ ++ E LQ + L L+ D +
Sbjct: 80 DSSG--PERILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQH 137
Query: 136 AAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDR 195
G +RLLI S AG +IG+ G I++LR ++ TI + C H +DR
Sbjct: 138 YKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE-----CC-PHSTDR 191
Query: 196 VVQISGDVPAVLNALVEIGNQLRENP 221
VV I G V+ + I + + E+P
Sbjct: 192 VVLIGGKPDRVVECIKIILDLISESP 217
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 53 RIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDN--DNVVSD 110
++ +P G +IGK G RI++IR E+ A+IKI + + E+R+I I+ + N
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYL 450
Query: 111 AENALQQIAALIL 123
+N+++Q +
Sbjct: 451 LQNSVKQYSGKFF 463
Score = 36.6 bits (83), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 144 TIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDV 203
T ++ I AG +IG GQ I+++R+ SGA+I I PL S DR++ I+G
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGS---EDRIITITGTQ 441
Query: 204 PAVLNALVEIGNQLRE 219
+ NA + N +++
Sbjct: 442 DQIQNAQYLLQNSVKQ 457
>sp|P61979|HNRPK_MOUSE Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus GN=Hnrnpk
PE=1 SV=1
Length = 463
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 27 GKRRREDGEIEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA 86
GKR ED E E + + R + V RI++ S+ G VIGK G I+ +R + A++ +
Sbjct: 20 GKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVP 79
Query: 87 DAIARHEERVIIISSKDN------DNVVSDAENALQ-----QIAALILKDDDSNSEASKV 135
D+ ER++ IS+ ++ E LQ + L L+ D +
Sbjct: 80 DSSG--PERILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQH 137
Query: 136 AAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDR 195
G +RLLI S AG +IG+ G I++LR ++ TI + C H +DR
Sbjct: 138 YKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE-----CC-PHSTDR 191
Query: 196 VVQISGDVPAVLNALVEIGNQLRENP 221
VV I G V+ + I + + E+P
Sbjct: 192 VVLIGGKPDRVVECIKIILDLISESP 217
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 53 RIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDN--DNVVSD 110
++ +P G +IGK G RI++IR E+ A+IKI + + E+R+I I+ + N
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYL 450
Query: 111 AENALQQIAALIL 123
+N+++Q +
Sbjct: 451 LQNSVKQYSGKFF 463
Score = 36.6 bits (83), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 144 TIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDV 203
T ++ I AG +IG GQ I+++R+ SGA+I I PL S DR++ I+G
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGS---EDRIITITGTQ 441
Query: 204 PAVLNALVEIGNQLRE 219
+ NA + N +++
Sbjct: 442 DQIQNAQYLLQNSVKQ 457
>sp|P61978|HNRPK_HUMAN Heterogeneous nuclear ribonucleoprotein K OS=Homo sapiens GN=HNRNPK
PE=1 SV=1
Length = 463
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 27 GKRRREDGEIEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA 86
GKR ED E E + + R + V RI++ S+ G VIGK G I+ +R + A++ +
Sbjct: 20 GKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVP 79
Query: 87 DAIARHEERVIIISSKDN------DNVVSDAENALQ-----QIAALILKDDDSNSEASKV 135
D+ ER++ IS+ ++ E LQ + L L+ D +
Sbjct: 80 DSSG--PERILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQH 137
Query: 136 AAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDR 195
G +RLLI S AG +IG+ G I++LR ++ TI + C H +DR
Sbjct: 138 YKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE-----CC-PHSTDR 191
Query: 196 VVQISGDVPAVLNALVEIGNQLRENP 221
VV I G V+ + I + + E+P
Sbjct: 192 VVLIGGKPDRVVECIKIILDLISESP 217
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 53 RIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDN--DNVVSD 110
++ +P G +IGK G RI++IR E+ A+IKI + + E+R+I I+ + N
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYL 450
Query: 111 AENALQQIAALIL 123
+N+++Q +
Sbjct: 451 LQNSVKQYSGKFF 463
Score = 36.6 bits (83), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 144 TIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDV 203
T ++ I AG +IG GQ I+++R+ SGA+I I PL S DR++ I+G
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGS---EDRIITITGTQ 441
Query: 204 PAVLNALVEIGNQLRE 219
+ NA + N +++
Sbjct: 442 DQIQNAQYLLQNSVKQ 457
>sp|Q5R5H8|HNRPK_PONAB Heterogeneous nuclear ribonucleoprotein K OS=Pongo abelii GN=HNRNPK
PE=2 SV=1
Length = 464
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 27 GKRRREDGEIEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA 86
GKR ED E E + + R + V RI++ S+ G VIGK G I+ +R + A++ +
Sbjct: 20 GKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVP 79
Query: 87 DAIARHEERVIIISSKDN------DNVVSDAENALQ-----QIAALILKDDDSNSEASKV 135
D+ ER++ IS+ ++ E LQ + L L+ D +
Sbjct: 80 DSSG--PERILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQH 137
Query: 136 AAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDR 195
G +RLLI S AG +IG+ G I++LR ++ TI + C H +DR
Sbjct: 138 YKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE-----CC-PHSTDR 191
Query: 196 VVQISGDVPAVLNALVEIGNQLRENP 221
VV I G V+ + I + + E+P
Sbjct: 192 VVLIGGKPDRVVECIKIILDLISESP 217
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 53 RIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDN--DNVVSD 110
++ +P G +IGK G RI++IR E+ A+IKI + + E+R+I I+ + N
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYL 450
Query: 111 AENALQQIA 119
+N+++Q A
Sbjct: 451 LQNSVKQYA 459
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 144 TIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDV 203
T ++ I AG +IG GQ I+++R+ SGA+I I PL S DR++ I+G
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGS---EDRIITITGTQ 441
Query: 204 PAVLNALVEIGNQLRE 219
+ NA + N +++
Sbjct: 442 DQIQNAQYLLQNSVKQ 457
>sp|Q4R4M6|HNRPK_MACFA Heterogeneous nuclear ribonucleoprotein K OS=Macaca fascicularis
GN=HNRNPK PE=2 SV=1
Length = 464
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 27 GKRRREDGEIEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA 86
GKR ED E E + + R + V RI++ S+ G VIGK G I+ +R + A++ +
Sbjct: 20 GKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVP 79
Query: 87 DAIARHEERVIIISSKDN------DNVVSDAENALQ-----QIAALILKDDDSNSEASKV 135
D+ ER++ IS+ ++ E LQ + L L+ D +
Sbjct: 80 DSSG--PERILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQH 137
Query: 136 AAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDR 195
G +RLLI S AG +IG+ G I++LR ++ TI + C H +DR
Sbjct: 138 YKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE-----CC-PHSTDR 191
Query: 196 VVQISGDVPAVLNALVEIGNQLRENP 221
VV I G V+ + I + + E+P
Sbjct: 192 VVLIGGKPDRVVECIKIILDLISESP 217
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 53 RIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDN--DNVVSD 110
++ +P G +IGK G RI++IR E+ A+IKI + + E+R+I I+ + N
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYL 450
Query: 111 AENALQQIA 119
+N+++Q A
Sbjct: 451 LQNSVKQYA 459
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 144 TIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDV 203
T ++ I AG +IG GQ I+++R+ SGA+I I PL S DR++ I+G
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGS---EDRIITITGTQ 441
Query: 204 PAVLNALVEIGNQLRE 219
+ NA + N +++
Sbjct: 442 DQIQNAQYLLQNSVKQ 457
>sp|O19049|HNRPK_RABIT Heterogeneous nuclear ribonucleoprotein K OS=Oryctolagus cuniculus
GN=HNRNPK PE=2 SV=1
Length = 463
Score = 61.2 bits (147), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 27 GKRRREDGEIEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA 86
GKR ED E E + + R + V RI++ S+ G VIGK G I+ +R + A++ +
Sbjct: 20 GKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVP 79
Query: 87 DAIARHEERVIIISSKDN------DNVVSDAENALQ-----QIAALILKDDDSNSEASKV 135
D+ ER++ IS+ ++ E LQ + L L+ D +
Sbjct: 80 DSSG--PERILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQH 137
Query: 136 AAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDR 195
G +RLLI S AG +IG+ G I++LR ++ TI + C H +DR
Sbjct: 138 FKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE-----CC-PHSTDR 191
Query: 196 VVQISGDVPAVLNALVEIGNQLRENP 221
VV I G V+ + I + + E+P
Sbjct: 192 VVLIGGKPDRVVECIKIILDLISESP 217
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 53 RIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDN--DNVVSD 110
++ +P G +IGK G RI++IR E+ A+IKI + + E+R+I I+ + N
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYL 450
Query: 111 AENALQQIAALIL 123
+N+++Q +
Sbjct: 451 LQNSVKQYSGKFF 463
Score = 36.6 bits (83), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 144 TIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDV 203
T ++ I AG +IG GQ I+++R+ SGA+I I PL S DR++ I+G
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGS---EDRIITITGTQ 441
Query: 204 PAVLNALVEIGNQLRE 219
+ NA + N +++
Sbjct: 442 DQIQNAQYLLQNSVKQ 457
>sp|Q9Y6M1|IF2B2_HUMAN Insulin-like growth factor 2 mRNA-binding protein 2 OS=Homo sapiens
GN=IGF2BP2 PE=1 SV=2
Length = 599
Score = 61.2 bits (147), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 103/215 (47%), Gaps = 28/215 (13%)
Query: 31 REDGEIEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKI--ADA 88
RE G G +A+ D RI+VP++ +G +IGKEG I+ I ++T++ + I +
Sbjct: 177 REQGHAPGGT--SQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN 234
Query: 89 IARHEERVIIISSKDNDNVVSDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLL 148
E+ V I ++ + + A + I ++ K+ D A ++ +++L
Sbjct: 235 SGAAEKPVTIHATPEGTS------EACRMILEIMQKEADETKLAEEIP--------LKIL 280
Query: 149 IAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLN 208
G LIG G+N++K+ + +G I I + L S + +R + + G V A +
Sbjct: 281 AHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL----SIYNPERTITVKGTVEACAS 336
Query: 209 ALVEIGNQLRENPPRQVISIS------PAYNYSAI 237
A +EI +LRE +++++ P N SA+
Sbjct: 337 AEIEIMKKLREAFENDMLAVNQQANLIPGLNLSAL 371
Score = 40.4 bits (93), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 13/142 (9%)
Query: 38 GSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARH-EERV 96
G P + + + + +P++ +G +IGK+G I+++ A+IKIA A ER+
Sbjct: 416 GPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERM 475
Query: 97 IIISSKDNDNVVSDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGC 156
+II+ A +I + +++ N + H+ + S AG
Sbjct: 476 VIITGPPEAQF-----KAQGRIFGKLKEENFFNPKEEVKLEAHIR-------VPSSTAGR 523
Query: 157 LIGMSGQNIEKLRNSSGATIVI 178
+IG G+ + +L+N + A +++
Sbjct: 524 VIGKGGKTVNELQNLTSAEVIV 545
>sp|Q3T0D0|HNRPK_BOVIN Heterogeneous nuclear ribonucleoprotein K OS=Bos taurus GN=HNRNPK
PE=2 SV=1
Length = 464
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 27 GKRRREDGEIEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA 86
GKR ED E E + + R + V RI++ S+ G VIGK G I+ +R + A++ +
Sbjct: 20 GKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVP 79
Query: 87 DAIARHEERVIIISSKDN------DNVVSDAENALQ-----QIAALILKDDDSNSEASKV 135
D+ ER++ IS+ ++ E LQ + L L+ D +
Sbjct: 80 DSSG--PERILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQH 137
Query: 136 AAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDR 195
G +RLLI S AG +IG+ G I++LR ++ TI + C +DR
Sbjct: 138 YKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE-----CC-PQSTDR 191
Query: 196 VVQISGDVPAVLNALVEIGNQLRENP 221
VV I G V+ + I + + E+P
Sbjct: 192 VVLIGGKPDRVVECIKIILDLISESP 217
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 53 RIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDN--DNVVSD 110
++ +P G +IGK G RI++IR E+ A+IKI + + E+R+I I+ + N
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYL 450
Query: 111 AENALQQIA 119
+N+++Q A
Sbjct: 451 LQNSVKQYA 459
Score = 36.6 bits (83), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 144 TIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDV 203
T ++ I AG +IG GQ I+++R+ SGA+I I PL S DR++ I+G
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGS---EDRIITITGTQ 441
Query: 204 PAVLNALVEIGNQLRE 219
+ NA + N +++
Sbjct: 442 DQIQNAQYLLQNSVKQ 457
>sp|Q9UNW9|NOVA2_HUMAN RNA-binding protein Nova-2 OS=Homo sapiens GN=NOVA2 PE=1 SV=1
Length = 492
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 89/178 (50%), Gaps = 10/178 (5%)
Query: 49 DVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA---DAIARHEERVIII--SSKD 103
+ ++++PS G +IGK G I ++++ET ATIK++ D ERV ++ +++
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 91
Query: 104 NDNVVSDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQ 163
+ V S +++I + K + N + A +L++ S AG +IG G
Sbjct: 92 LNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGA 151
Query: 164 NIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENP 221
++ + SGA + + +Q P + E RVV +SG+ V A+ I +++E+P
Sbjct: 152 TVKAVMEQSGAWVQL---SQKPEGINLQE--RVVTVSGEPEQVHKAVSAIVQKVQEDP 204
>sp|O00425|IF2B3_HUMAN Insulin-like growth factor 2 mRNA-binding protein 3 OS=Homo sapiens
GN=IGF2BP3 PE=1 SV=2
Length = 579
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 100/216 (46%), Gaps = 30/216 (13%)
Query: 44 RAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKI--ADAIARHEERVIIISS 101
+ K D+ R++VP++ +G +IGKEG I+ I ++T++ I + + E+ + I+S+
Sbjct: 190 KQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILST 249
Query: 102 KDNDNVVSDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMS 161
+ + A + I ++ K+ ++ +++L + G LIG
Sbjct: 250 PEGTSA------ACKSILEIMHKEAQDIKFTEEIP--------LKILAHNNFVGRLIGKE 295
Query: 162 GQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENP 221
G+N++K+ + I I +L L + +R + + G+V A EI ++RE+
Sbjct: 296 GRNLKKIEQDTDTKITISPLQELTL----YNPERTITVKGNVETCAKAEEEIMKKIRESY 351
Query: 222 PRQVISIS------PAYNYSAIRPAQPFVEPTSGQP 251
+ S++ P N +A+ PTSG P
Sbjct: 352 ENDIASMNLQAHLIPGLNLNALG----LFPPTSGMP 383
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 88/222 (39%), Gaps = 60/222 (27%)
Query: 46 KAQDVLF------RIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA---DAIARHEERV 96
+AQD+ F +I+ + +G++IGKEG ++KI ++T I I+ + + ER
Sbjct: 267 EAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTLYNPERT 326
Query: 97 IIISSKDNDNVVSDAENALQQIAALILKDDDSNSEASKVAAGHV---------------- 140
I + K N + AE + + +++ N AS H+
Sbjct: 327 ITV--KGNVETCAKAEEEIMKK----IRESYENDIASMNLQAHLIPGLNLNALGLFPPTS 380
Query: 141 -----------------------AANTIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIV 177
T+ L I G +IG GQ+I++L +GA+I
Sbjct: 381 GMPPPTSGPPSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIK 440
Query: 178 ILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRE 219
I AP + P R+V I+G A A I +++E
Sbjct: 441 I-APAEAP-----DAKVRMVIITGPPEAQFKAQGRIYGKIKE 476
Score = 39.3 bits (90), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 90/185 (48%), Gaps = 27/185 (14%)
Query: 53 RIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEE-RVIIISSKDNDNVVSDA 111
+ +P+ +G +IGK+G I+++ A+IKIA A A + R++II+ +A
Sbjct: 409 HLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGP------PEA 462
Query: 112 ENALQQIAALILKDDD--SNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLR 169
+ Q +K+++ S E K+ A + + AG +IG G+ + +L+
Sbjct: 463 QFKAQGRIYGKIKEENFVSPKEEVKLEA--------HIRVPSFAAGRVIGKGGKTVNELQ 514
Query: 170 NSSGATIVILAPNQLPLCASAHESDR-VVQISGDVPAVLNA---LVEIGNQLRENPPRQV 225
N S A +V+ P + E+D+ VV+I+G A A + EI Q++++ ++
Sbjct: 515 NLSSAEVVV------PRDQTPDENDQVVVKITGHFYACQVAQRKIQEILTQVKQHQQQKA 568
Query: 226 ISISP 230
+ P
Sbjct: 569 LQSGP 573
>sp|O74919|RNC1_SCHPO RNA-binding protein rnc1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rnc1 PE=1 SV=1
Length = 398
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 89/207 (42%), Gaps = 26/207 (12%)
Query: 14 SVVTEPEPRHDV---SGKRRREDGEIEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGH 70
S+ +PEP V S K +D Q + R ++ +R+ G +IGK G
Sbjct: 64 SMTNQPEPTSQVPPISAKPPMDDATY---------ATQQLTLRALLSTREAGIIIGKAGK 114
Query: 71 RIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVSDAENALQQIAALILKDDDSNS 130
+ ++R T + A+ +RV+ IS +NVV + A D + S
Sbjct: 115 NVAELRSTTNVKAGVTKAVPNVHDRVLTISGP-LENVVRAYRFIIDIFAKNSTNPDGTPS 173
Query: 131 EASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASA 190
+A+ +RLLIA S G +IG +G I KL + +I + + LP
Sbjct: 174 DAN-------TPRKLRLLIAHSLMGSIIGRNGLRI-KLIQDKCSCRMIASKDMLP----- 220
Query: 191 HESDRVVQISGDVPAVLNALVEIGNQL 217
++R V+I G V + A+ EIG L
Sbjct: 221 QSTERTVEIHGTVDNLHAAIWEIGKCL 247
>sp|P38151|PBP2_YEAST PAB1-binding protein 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PBP2 PE=1 SV=1
Length = 413
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 29/204 (14%)
Query: 49 DVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVV 108
DV R++ + ++G +G I +I+ ET A I I++ I ER++ +
Sbjct: 66 DVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPERIVYVRG-----TC 120
Query: 109 SDAENALQQIAALILKD--DDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIE 166
D A I +L++ ++ N E +++ I LLI GC+IG G +
Sbjct: 121 DDVAKAYGMIVRALLEEHGNEDNGEDIEIS--------INLLIPHHLMGCIIGKRGSRLR 172
Query: 167 KLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQL----RENPP 222
++ + S A + +PNQL L +DR++ I+G A+ A I L E+P
Sbjct: 173 EIEDLSAAKL-FASPNQLLL-----SNDRILTINGVPDAIHIATFYISQTLLNFQMESPQ 226
Query: 223 RQV---ISISPA-YNYSAIRPAQP 242
+ V I P +N I +QP
Sbjct: 227 KNVKRSIYYQPTQFNSVLIDHSQP 250
Score = 34.3 bits (77), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 30/67 (44%)
Query: 33 DGEIEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARH 92
DG + P V I + + +G VIGK+G I ++E T +I I D +
Sbjct: 314 DGPVISPAPGNHLLMNFVQQEIFIDEKFVGNVIGKDGKHINSVKESTGCSIIIQDPVEGS 373
Query: 93 EERVIII 99
ER + I
Sbjct: 374 SERRLTI 380
>sp|Q2PFW9|NOVA1_MACFA RNA-binding protein Nova-1 OS=Macaca fascicularis GN=NOVA1 PE=2
SV=1
Length = 483
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 86/188 (45%), Gaps = 24/188 (12%)
Query: 28 KRRREDGEIEGSDPKRRAKAQD--VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKI 85
++R + E KR +D ++++PS G +IGK G I ++++ET ATIK+
Sbjct: 26 RKRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL 85
Query: 86 A---DAIARHEERVIIISSKDNDNVVSDAENALQQIAALILKDDDSN---SEASKVAAGH 139
+ D ERV +I +A NA+ A +++ N +E +
Sbjct: 86 SKSKDFYPGTTERVCLIQG------TVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQ 139
Query: 140 VAAN-----TIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESD 194
N +++++ S AG +IG G ++ + SGA + + +Q P + E
Sbjct: 140 TTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL---SQKPDGINLQE-- 194
Query: 195 RVVQISGD 202
RVV +SG+
Sbjct: 195 RVVTVSGE 202
>sp|Q96I24|FUBP3_HUMAN Far upstream element-binding protein 3 OS=Homo sapiens GN=FUBP3
PE=1 SV=2
Length = 572
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 25/160 (15%)
Query: 56 VPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVSDAENAL 115
VP + +G +IG+ G +I +I+ E+ I+IA + ER +++ + A+ L
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPES--IEQAKRLL 141
Query: 116 QQI------AALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLR 169
QI D DSNS ++ LI S+ G +IG G+ I++L+
Sbjct: 142 GQIVDRCRNGPGFHNDIDSNSTIQEI------------LIPASKVGLVIGRGGETIKQLQ 189
Query: 170 NSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNA 209
+G +V++ LP A D+ ++I+GD V A
Sbjct: 190 ERTGVKMVMIQDGPLPTGA-----DKPLRITGDAFKVQQA 224
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/132 (20%), Positives = 63/132 (47%), Gaps = 20/132 (15%)
Query: 54 IIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVSDA-- 111
I++P+ ++G VIG+ G I++++E T + + ++ + + + DA
Sbjct: 167 ILIPASKVGLVIGRGGETIKQLQERTGVKMVMI------QDGPLPTGADKPLRITGDAFK 220
Query: 112 -ENALQQIAALILKDDDSNSEA------SKVAAGHVAANTIRLLIAGSQAGCLIGMSGQN 164
+ A + + +I + D ++ S++ G + + R + G +IG +G+
Sbjct: 221 VQQAREMVLEIIREKDQADFRGVRGDFNSRMGGGSIEVSVPRFAV-----GIVIGRNGEM 275
Query: 165 IEKLRNSSGATI 176
I+K++N +G I
Sbjct: 276 IKKIQNDAGVRI 287
>sp|Q80WA4|NOVA1_RAT RNA-binding protein Nova-1 (Fragment) OS=Rattus norvegicus GN=Nova1
PE=2 SV=1
Length = 474
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 86/188 (45%), Gaps = 24/188 (12%)
Query: 28 KRRREDGEIEGSDPKRRAKAQD--VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKI 85
++R + E KR +D ++++PS G +IGK G I ++++ET ATIK+
Sbjct: 25 RKRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL 84
Query: 86 A---DAIARHEERVIIISSKDNDNVVSDAENALQQIAALILKDDDSN---SEASKVAAGH 139
+ D ERV +I +A NA+ A +++ N +E +
Sbjct: 85 SKSKDFYPGTTERVCLIQG------TIEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQ 138
Query: 140 VAAN-----TIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESD 194
N +++++ S AG +IG G ++ + SGA + + +Q P + E
Sbjct: 139 TTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL---SQKPDGINLQE-- 193
Query: 195 RVVQISGD 202
RVV +SG+
Sbjct: 194 RVVTVSGE 201
>sp|Q9CPN8|IF2B3_MOUSE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Mus musculus
GN=Igf2bp3 PE=1 SV=1
Length = 579
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 94/202 (46%), Gaps = 26/202 (12%)
Query: 44 RAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKI--ADAIARHEERVIIISS 101
+ K D+ R++VP++ +G +IGKEG I+ I ++T++ I + + E+ + I+S+
Sbjct: 190 KQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKSITILST 249
Query: 102 KDNDNVVSDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMS 161
+ + A + I ++ K+ ++ +++L + G LIG
Sbjct: 250 PEGTSA------ACKSILEIMHKEAQDIKFTEEIP--------LKILAHNNFVGRLIGKE 295
Query: 162 GQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENP 221
G+N++K+ + I I +L L + +R + + G V A EI ++RE+
Sbjct: 296 GRNLKKIEQDTDTKITISPLQELTL----YNPERTITVKGSVETCAKAEEEIMKKIRESY 351
Query: 222 PRQVISIS------PAYNYSAI 237
+ S++ P N +A+
Sbjct: 352 ENDIASMNLQAHLIPGLNLNAL 373
Score = 38.9 bits (89), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 87/216 (40%), Gaps = 48/216 (22%)
Query: 46 KAQDVLF------RIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA------------- 86
+AQD+ F +I+ + +G++IGKEG ++KI ++T I I+
Sbjct: 267 EAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTLYNPERT 326
Query: 87 -------DAIARHEERVI--IISSKDNDNVVSDAENAL---QQIAALILKDDDSNSEASK 134
+ A+ EE ++ I S +ND + + L + AL L S
Sbjct: 327 ITVKGSVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPT 386
Query: 135 VAAG-----------HVAANTIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQ 183
T+ L I G +IG GQ+I++L +GA+I I AP +
Sbjct: 387 SGPPSTLTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI-APAE 445
Query: 184 LPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRE 219
P R+V I+G A A I +++E
Sbjct: 446 AP-----DAKVRMVIITGPPEAQFKAQGRIYGKIKE 476
Score = 36.6 bits (83), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 90/185 (48%), Gaps = 27/185 (14%)
Query: 53 RIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEE-RVIIISSKDNDNVVSDA 111
+ +P+ +G +IGK+G I+++ A+IKIA A A + R++II+ +A
Sbjct: 409 HLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGP------PEA 462
Query: 112 ENALQQIAALILKDDD--SNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLR 169
+ Q +K+++ S E K+ A + + AG +IG G+ + +L+
Sbjct: 463 QFKAQGRIYGKIKEENFVSPKEEVKLEA--------HIRVPSFAAGRVIGKGGKTVNELQ 514
Query: 170 NSSGATIVILAPNQLPLCASAHESDR-VVQISGDVPAVLNA---LVEIGNQLRENPPRQV 225
+ S A +V+ P + E+D+ VV+I+G A A + EI Q++++ ++
Sbjct: 515 SLSSAEVVV------PRDQTPDENDQVVVKITGHFYACQVAQRKIQEILTQVKQHQQQKA 568
Query: 226 ISISP 230
+ P
Sbjct: 569 LQSGP 573
>sp|O42254|IF2B1_CHICK Insulin-like growth factor 2 mRNA-binding protein 1 OS=Gallus
gallus GN=IGF2BP1 PE=1 SV=1
Length = 576
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 24/196 (12%)
Query: 49 DVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA-DAIARHEERVIIISSKDNDNV 107
D+ R++VP++ +G +IGKEG I+ I ++T++ I + A E+ I I S
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHSTP---- 250
Query: 108 VSDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEK 167
A + I ++ K+ A +V +++L + G LIG G+N++K
Sbjct: 251 -EGCSAACKMILEIMQKEAKDTKTADEVP--------LKILAHNNFVGRLIGKEGRNLKK 301
Query: 168 LRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPRQVIS 227
+ + I I + L L + +R + + G + A EI ++RE V +
Sbjct: 302 VEQDTETKITISSLQDLTL----YNPERTITVKGSIENCCKAEQEIMKKVREAYENDVAA 357
Query: 228 IS------PAYNYSAI 237
+S P N +A+
Sbjct: 358 MSLQSHLIPGLNLAAV 373
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 93/220 (42%), Gaps = 41/220 (18%)
Query: 35 EIEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA---DAIAR 91
EI + K A +V +I+ + +G++IGKEG ++K+ ++T+ I I+ D
Sbjct: 262 EIMQKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLY 321
Query: 92 HEERVIIIS-------------------SKDNDNVVSDAENAL---QQIAALILKDDDSN 129
+ ER I + + +ND ++ L +AA+ L SN
Sbjct: 322 NPERTITVKGSIENCCKAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAAVGLFPASSN 381
Query: 130 SEASKVAAGHVAA----------NTIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVIL 179
+ ++ AA T+ + I G +IG GQ+I++L + A+I I
Sbjct: 382 AVPPPPSSVSGAAPYSSFMPPEQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKI- 440
Query: 180 APNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRE 219
AP + P R+V I+G A A I +L+E
Sbjct: 441 APPETP-----DSKVRMVVITGPPEAQFKAQGRIYGKLKE 475
Score = 35.8 bits (81), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 13/127 (10%)
Query: 53 RIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA-DAIARHEERVIIISSKDNDNVVSDA 111
+ +P++ +G +IGK+G I+++ A+IKIA + R+++I+ +A
Sbjct: 408 HVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITGP------PEA 461
Query: 112 ENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLRNS 171
+ Q LK+++ +V + + S AG +IG G+ + +L+N
Sbjct: 462 QFKAQGRIYGKLKEENFFGPKEEVKL------ETHIRVPASAAGRVIGKGGKTVNELQNL 515
Query: 172 SGATIVI 178
+ A +V+
Sbjct: 516 TAAEVVV 522
>sp|O88477|IF2B1_MOUSE Insulin-like growth factor 2 mRNA-binding protein 1 OS=Mus musculus
GN=Igf2bp1 PE=1 SV=1
Length = 577
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 89/196 (45%), Gaps = 24/196 (12%)
Query: 49 DVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA-DAIARHEERVIIISSKDNDNV 107
D+ R++VP++ +G +IGKEG I+ I ++T++ I + A E+ I + S
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHS-----T 249
Query: 108 VSDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEK 167
+A + I ++ K+ A +V +++L + G LIG G+N++K
Sbjct: 250 PEGCSSACKMILEIMHKEAKDTKTADEVP--------LKILAHNNFVGRLIGKEGRNLKK 301
Query: 168 LRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPRQVIS 227
+ + I I + L L + +R + + G + A EI ++RE V +
Sbjct: 302 VEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVREAYENDVAA 357
Query: 228 IS------PAYNYSAI 237
+S P N +A+
Sbjct: 358 MSLQSHLIPGLNLAAV 373
Score = 37.4 bits (85), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 91/222 (40%), Gaps = 44/222 (19%)
Query: 35 EIEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA---DAIAR 91
EI + K A +V +I+ + +G++IGKEG ++K+ ++T+ I I+ D
Sbjct: 262 EIMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLY 321
Query: 92 HEERVIIISSKDNDNVVSDAENALQQIAALILKDDDSNSEASKVAAG-HVAA-------- 142
+ ER I + +N + ++++ D + S S + G ++AA
Sbjct: 322 NPERTITVKGAI-ENCCRAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAAVGLFPASS 380
Query: 143 -------------------------NTIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIV 177
+++ I G +IG GQ+I++L + A+I
Sbjct: 381 SAVPPPPSSVTGAAPYSSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIK 440
Query: 178 ILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRE 219
I AP + P R+V I+G A A I +L+E
Sbjct: 441 I-APPETP-----DSKVRMVVITGPPEAQFKAQGRIYGKLKE 476
Score = 35.8 bits (81), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 71/148 (47%), Gaps = 19/148 (12%)
Query: 51 LFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA-DAIARHEERVIIISSKDNDNVVS 109
+ ++ +P++ +G +IGK+G I+++ A+IKIA + R+++I+
Sbjct: 407 MVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITGP------P 460
Query: 110 DAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLR 169
+A+ Q LK+++ +V + + S AG +IG G+ + +L+
Sbjct: 461 EAQFKAQGRIYGKLKEENFFGPKEEVKL------ETHIRVPASAAGRVIGKGGKTVNELQ 514
Query: 170 NSSGATIVILAPNQLPLCASAHESDRVV 197
N + A +V+ P + E+D+V+
Sbjct: 515 NLTAAEVVV------PRDQTPDENDQVI 536
>sp|Q9NZI8|IF2B1_HUMAN Insulin-like growth factor 2 mRNA-binding protein 1 OS=Homo sapiens
GN=IGF2BP1 PE=1 SV=2
Length = 577
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 89/196 (45%), Gaps = 24/196 (12%)
Query: 49 DVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA-DAIARHEERVIIISSKDNDNV 107
D+ R++VP++ +G +IGKEG I+ I ++T++ I + A E+ I + S
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHS-----T 249
Query: 108 VSDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEK 167
+A + I ++ K+ A +V +++L + G LIG G+N++K
Sbjct: 250 PEGCSSACKMILEIMHKEAKDTKTADEVP--------LKILAHNNFVGRLIGKEGRNLKK 301
Query: 168 LRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPRQVIS 227
+ + I I + L L + +R + + G + A EI ++RE V +
Sbjct: 302 VEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVREAYENDVAA 357
Query: 228 IS------PAYNYSAI 237
+S P N +A+
Sbjct: 358 MSLQSHLIPGLNLAAV 373
Score = 36.2 bits (82), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 71/148 (47%), Gaps = 19/148 (12%)
Query: 51 LFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA-DAIARHEERVIIISSKDNDNVVS 109
+ ++ +P++ +G +IGK+G I+++ A+IKIA + R++II+
Sbjct: 407 MVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGP------P 460
Query: 110 DAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLR 169
+A+ Q LK+++ +V + + S AG +IG G+ + +L+
Sbjct: 461 EAQFKAQGRIYGKLKEENFFGPKEEVKL------ETHIRVPASAAGRVIGKGGKTVNELQ 514
Query: 170 NSSGATIVILAPNQLPLCASAHESDRVV 197
N + A +V+ P + E+D+V+
Sbjct: 515 NLTAAEVVV------PRDQTPDENDQVI 536
>sp|Q8CGX0|IF2B1_RAT Insulin-like growth factor 2 mRNA-binding protein 1 OS=Rattus
norvegicus GN=Igf2bp1 PE=1 SV=1
Length = 577
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 89/196 (45%), Gaps = 24/196 (12%)
Query: 49 DVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA-DAIARHEERVIIISSKDNDNV 107
D+ R++VP++ +G +IGKEG I+ I ++T++ I + A E+ I + S
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHS-----T 249
Query: 108 VSDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEK 167
+A + I ++ K+ A +V +++L + G LIG G+N++K
Sbjct: 250 PEGCSSACKMILEIMHKEAKDTKTADEVP--------LKILAHNNFVGRLIGKEGRNLKK 301
Query: 168 LRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRENPPRQVIS 227
+ + I I + L L + +R + + G + A EI ++RE V +
Sbjct: 302 VEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVREAYENDVAA 357
Query: 228 IS------PAYNYSAI 237
+S P N +A+
Sbjct: 358 MSLQSHLIPGLNLAAV 373
Score = 35.8 bits (81), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 71/148 (47%), Gaps = 19/148 (12%)
Query: 51 LFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA-DAIARHEERVIIISSKDNDNVVS 109
+ ++ +P++ +G +IGK+G I+++ A+IKIA + R+++I+
Sbjct: 407 MVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITGP------P 460
Query: 110 DAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLR 169
+A+ Q LK+++ +V + + S AG +IG G+ + +L+
Sbjct: 461 EAQFKAQGRIYGKLKEENFFGPKEEVKL------ETHIRVPASAAGRVIGKGGKTVNELQ 514
Query: 170 NSSGATIVILAPNQLPLCASAHESDRVV 197
N + A +V+ P + E+D+V+
Sbjct: 515 NLTAAEVVV------PRDQTPDENDQVI 536
>sp|C5DIR2|HEK2_LACTC Heterogeneous nuclear rnp K-like protein 2 OS=Lachancea
thermotolerans (strain ATCC 56472 / CBS 6340 / NRRL
Y-8284) GN=HEK2 PE=3 SV=1
Length = 285
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 82/192 (42%), Gaps = 30/192 (15%)
Query: 48 QDVL-FRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDN 106
QD + R++V ++ ++IG +G IQKIRE +K I I+ +R++ S
Sbjct: 7 QDTVNHRVLVSLKEAARIIGAQGMTIQKIRESSKVKIGISPHERGCSDRILSCSGS---- 62
Query: 107 VVSDAENALQQIAALILKDDDSNSEASKV----------AAGHVA-------ANTIRLLI 149
NA+ + +L DDS E +A + +RL++
Sbjct: 63 -AQGVANAIGDVVE-VLNQDDSEPETHSYKPLNFILPAPSATEIQDPESVKRIGNLRLIV 120
Query: 150 AGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNA 209
+ SQ +IG G I+ L G V+ + N LP DRVV+I G A+ +
Sbjct: 121 SNSQVSSIIGTQGSRIKSLIEKHGVK-VVASKNFLP-----DSQDRVVEIQGFPGAIASC 174
Query: 210 LVEIGNQLRENP 221
LV+I L P
Sbjct: 175 LVDISEILAAEP 186
>sp|Q96AE4|FUBP1_HUMAN Far upstream element-binding protein 1 OS=Homo sapiens GN=FUBP1
PE=1 SV=3
Length = 644
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 15/148 (10%)
Query: 56 VPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVSDAENAL 115
VP +G +IG+ G +I +I++E+ I+IA ER +++ V A+ L
Sbjct: 107 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTG--TPESVQSAKRLL 164
Query: 116 QQIAALILKDDDSNSEASKVAAGHVAANTIR-LLIAGSQAGCLIGMSGQNIEKLRNSSGA 174
QI + A G N ++ ++I S+AG +IG G+ I++L+ +G
Sbjct: 165 DQIV-------EKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGV 217
Query: 175 TIVILAPNQLPLCASAHESDRVVQISGD 202
+V++ P A D+ ++I+GD
Sbjct: 218 KMVMI--QDGPQNTGA---DKPLRITGD 240
Score = 32.7 bits (73), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 68/157 (43%), Gaps = 28/157 (17%)
Query: 54 IIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNV-----V 108
I++P+ + G VIGK G I++++E +A +K+ V+I N +
Sbjct: 190 IMIPASKAGLVIGKGGETIKQLQE--RAGVKM----------VMIQDGPQNTGADKPLRI 237
Query: 109 SDAENALQQIAALIL---KDDDSNSEASKVAAGHVAAN-TIRLLIAGSQAGCLIGMSGQN 164
+ +QQ ++L +D E + N I + I G +IG +G+
Sbjct: 238 TGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEM 297
Query: 165 IEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISG 201
I+K++N +G I P+ +R+ QI+G
Sbjct: 298 IKKIQNDAGVRIQ-FKPD------DGTTPERIAQITG 327
>sp|Q5ZLP8|IF2B3_CHICK Insulin-like growth factor 2 mRNA-binding protein 3 OS=Gallus
gallus GN=IGF2BP3 PE=2 SV=1
Length = 584
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 18/179 (10%)
Query: 43 RRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA-DAIARHEERVIIISS 101
R+ DV R++VP++ +G +IGKEG I+ I ++T++ I I A E+ I I S
Sbjct: 190 RQKPQSDVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHS 249
Query: 102 KDNDNVVSDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMS 161
A + I ++ K+ ++ +++L + G LIG
Sbjct: 250 -----TPEGCSTACKIIMEIMQKEAQDTKFTEEIP--------LKILAHNNFVGRLIGKE 296
Query: 162 GQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLREN 220
G+N++K+ + I I L L + +R + + G + A EI ++RE+
Sbjct: 297 GRNLKKIEQDTDTKITISPLQDLTL----YNPERTITVKGSIETCAKAEEEIMKKIRES 351
Score = 37.4 bits (85), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 89/219 (40%), Gaps = 51/219 (23%)
Query: 46 KAQDVLF------RIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA---DAIARHEERV 96
+AQD F +I+ + +G++IGKEG ++KI ++T I I+ D + ER
Sbjct: 268 EAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTLYNPERT 327
Query: 97 III------SSKDNDNVVSDAENALQQ-IAALILK------------------------- 124
I + +K + ++ + + IAA+ L+
Sbjct: 328 ITVKGSIETCAKAEEEIMKKIRESYENDIAAMNLQAHLIPGLNLNALGLFPPSSSGIPPP 387
Query: 125 ----DDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILA 180
+ + + + T+ L I G +IG GQ+I++L +GA+I I A
Sbjct: 388 AVSVASAAAAASYPPFGQQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKI-A 446
Query: 181 PNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRE 219
P + P R+V I+G A A I +L+E
Sbjct: 447 PAEGP-----DAKLRMVIITGPPEAQFKAQGRIYGKLKE 480
Score = 36.2 bits (82), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 74/156 (47%), Gaps = 22/156 (14%)
Query: 54 IIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEE-RVIIISSKDNDNVVSDAE 112
+ +P+ +G +IGK+G I+++ A+IKIA A + R++II+ +A+
Sbjct: 414 LFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGP------PEAQ 467
Query: 113 NALQQIAALILKDDDSNSEASKVA-AGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLRNS 171
Q LK+++ +V H+ + AG +IG G+ + +L+N
Sbjct: 468 FKAQGRIYGKLKEENFFGPKEEVKLEAHIK-------VPSYAAGRVIGKGGKTVNELQNL 520
Query: 172 SGATIVILAPNQLPLCASAHESDR-VVQISGDVPAV 206
+ A +V+ P + E+D+ VV+I+G A
Sbjct: 521 TSAEVVV------PRDQTPDENDQVVVKITGHFYAC 550
>sp|Q32PX7|FUBP1_RAT Far upstream element-binding protein 1 OS=Rattus norvegicus
GN=Fubp1 PE=1 SV=1
Length = 639
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 15/148 (10%)
Query: 56 VPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVSDAENAL 115
VP +G +IG+ G +I +I++E+ I+IA ER +++ V A+ L
Sbjct: 102 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTG--TPESVQSAKRLL 159
Query: 116 QQIAALILKDDDSNSEASKVAAGHVAANTIR-LLIAGSQAGCLIGMSGQNIEKLRNSSGA 174
QI + A G N ++ ++I S+AG +IG G+ I++L+ +G
Sbjct: 160 DQIV-------EKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGV 212
Query: 175 TIVILAPNQLPLCASAHESDRVVQISGD 202
+V++ P A D+ ++I+GD
Sbjct: 213 KMVMI--QDGPQNTGA---DKPLRITGD 235
Score = 34.3 bits (77), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 28/157 (17%)
Query: 54 IIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNV-----V 108
I++P+ + G VIGK G I++++E +A +K+ V+I N +
Sbjct: 185 IMIPASKAGLVIGKGGETIKQLQE--RAGVKM----------VMIQDGPQNTGADKPLRI 232
Query: 109 SDAENALQQIAALIL---KDDDSNSEASKVAAGHVAAN-TIRLLIAGSQAGCLIGMSGQN 164
+ +QQ ++L +D E + N I + I G +IG +G+
Sbjct: 233 TGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEM 292
Query: 165 IEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISG 201
I+K++N +G I P+ DR+ QI+G
Sbjct: 293 IKKIQNDAGVRIQ-FKPD------DGTTPDRIAQITG 322
>sp|Q91WJ8|FUBP1_MOUSE Far upstream element-binding protein 1 OS=Mus musculus GN=Fubp1
PE=1 SV=1
Length = 651
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 15/148 (10%)
Query: 56 VPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVSDAENAL 115
VP +G +IG+ G +I +I++E+ I+IA ER +++ V A+ L
Sbjct: 103 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTG--TPESVQSAKRLL 160
Query: 116 QQIAALILKDDDSNSEASKVAAGHVAANTIR-LLIAGSQAGCLIGMSGQNIEKLRNSSGA 174
QI + A G N ++ ++I S+AG +IG G+ I++L+ +G
Sbjct: 161 DQIV-------EKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGV 213
Query: 175 TIVILAPNQLPLCASAHESDRVVQISGD 202
+V++ P A D+ ++I+GD
Sbjct: 214 KMVMI--QDGPQNTGA---DKPLRITGD 236
Score = 34.3 bits (77), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 28/157 (17%)
Query: 54 IIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNV-----V 108
I++P+ + G VIGK G I++++E +A +K+ V+I N +
Sbjct: 186 IMIPASKAGLVIGKGGETIKQLQE--RAGVKM----------VMIQDGPQNTGADKPLRI 233
Query: 109 SDAENALQQIAALIL---KDDDSNSEASKVAAGHVAAN-TIRLLIAGSQAGCLIGMSGQN 164
+ +QQ ++L +D E + N I + I G +IG +G+
Sbjct: 234 TGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEM 293
Query: 165 IEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISG 201
I+K++N +G I P+ DR+ QI+G
Sbjct: 294 IKKIQNDAGVRIQ-FKPD------DGTTPDRIAQITG 323
>sp|Q08CK7|IF2B1_DANRE Insulin-like growth factor 2 mRNA-binding protein 1 OS=Danio rerio
GN=igf2bp1 PE=1 SV=1
Length = 598
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 84/184 (45%), Gaps = 20/184 (10%)
Query: 38 GSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKI--ADAIARHEER 95
GS + + D+ R++VP++ +G +IGKEG I+ I ++T++ I + + E+
Sbjct: 187 GSGIPSKHQHADIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKP 246
Query: 96 VIIISSKDNDNVVSDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAG 155
+ I S+ + S A + +I KD + E +++L + G
Sbjct: 247 ISIHSTPEG---CSAACRMILEIMNQEAKDTKTADEVP-----------LKVLAHNNFVG 292
Query: 156 CLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGN 215
LIG G+N++K+ + I I L L + +R + + G + A A EI
Sbjct: 293 RLIGKEGRNLKKVEQDTDTKITISPLQDLTL----YNPERTITVKGSIEACCLAEQEIMK 348
Query: 216 QLRE 219
++RE
Sbjct: 349 KVRE 352
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 88/220 (40%), Gaps = 41/220 (18%)
Query: 35 EIEGSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA---DAIAR 91
EI + K A +V +++ + +G++IGKEG ++K+ ++T I I+ D
Sbjct: 265 EIMNQEAKDTKTADEVPLKVLAHNNFVGRLIGKEGRNLKKVEQDTDTKITISPLQDLTLY 324
Query: 92 HEERVIIIS-------------------SKDNDNVVSDAENAL---QQIAALILKDDDSN 129
+ ER I + + DND + + L + A+ L S
Sbjct: 325 NPERTITVKGSIEACCLAEQEIMKKVREAYDNDIAAMNQQTHLIPGLNLGAIGLFPPSSA 384
Query: 130 SEASKVA----------AGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVIL 179
+ G T+ + I G LIG GQ+I++L +GA+I I
Sbjct: 385 MPPPALGNSVPGPPYGPMGASEQETVHVYIPAQAVGALIGKKGQHIKQLSRFAGASIKI- 443
Query: 180 APNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRE 219
AP + P R+V ++G A A I +L+E
Sbjct: 444 APAEAP-----DSKMRMVIVTGPPEAQFKAQGRIYGKLKE 478
Score = 38.9 bits (89), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 71/146 (48%), Gaps = 19/146 (13%)
Query: 53 RIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEE-RVIIISSKDNDNVVSDA 111
+ +P++ +G +IGK+G I+++ A+IKIA A A + R++I++ +A
Sbjct: 411 HVYIPAQAVGALIGKKGQHIKQLSRFAGASIKIAPAEAPDSKMRMVIVTGP------PEA 464
Query: 112 ENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLRNS 171
+ Q LK+++ +V + +A + AG +IG G+ + +L+N
Sbjct: 465 QFKAQGRIYGKLKEENFFGPKEEVKL------ETHIKVAAAAAGRVIGKGGKTVNELQNL 518
Query: 172 SGATIVILAPNQLPLCASAHESDRVV 197
+ A +V+ P + E D+V+
Sbjct: 519 TAAEVVV------PREQTPDEHDQVI 538
>sp|Q9PW80|IF2B3_DANRE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Danio rerio
GN=igf2bp3 PE=1 SV=1
Length = 582
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 87/185 (47%), Gaps = 23/185 (12%)
Query: 38 GSDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKI--ADAIARHEER 95
G+ PK ++ DV R++VP++ +G +IGKEG I+ I ++T + I I + E+
Sbjct: 186 GARPKLQS---DVPLRLLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENAGAAEKP 242
Query: 96 VIIISSKDNDNVVSDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAG 155
+ + S+ + +A + I ++ K+ ++ +++L + G
Sbjct: 243 ITVHSTPEG------CSSACRNIMEIMQKEAIDTKITEEIP--------LKILAHNNFVG 288
Query: 156 CLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGN 215
LIG G+N++K+ + I I L L + +R + + G + A A EI
Sbjct: 289 RLIGKEGRNLKKIEQDTDTKITISPLQDLTL----YNPERTITVKGTLDACAKAEEEIMK 344
Query: 216 QLREN 220
++RE+
Sbjct: 345 KVRES 349
Score = 38.1 bits (87), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 22/155 (14%)
Query: 54 IIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIA-RHEERVIIISSKDNDNVVSDAE 112
+ +P+ +G +IGK+G I+++ A+IKIA A ++R++IIS +A+
Sbjct: 413 LFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPADGIDAKQRMVIISGP------PEAQ 466
Query: 113 NALQQIAALILKDDDSNSEASKVA-AGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLRNS 171
Q LK+++ +V H+ + AG +IG G+ + +L+N
Sbjct: 467 FKAQGRIFGKLKEENFFGPKEEVKLEAHIKVPSF-------AAGRVIGKGGKTVNELQNL 519
Query: 172 SGATIVILAPNQLPLCASAHESDR-VVQISGDVPA 205
+ A +V+ P + E+D+ VV+I+G A
Sbjct: 520 TSAEVVV------PRDQTPDENDQVVVKITGHFYA 548
>sp|A7TT46|HEK2_VANPO Heterogeneous nuclear rnp K-like protein 2 OS=Vanderwaltozyma
polyspora (strain ATCC 22028 / DSM 70294) GN=HEK2 PE=3
SV=1
Length = 336
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 84/197 (42%), Gaps = 47/197 (23%)
Query: 53 RIIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVSDAE 112
R+++ ++ K+IG +G +IQK+R++ I I++ R +R++I + + D
Sbjct: 21 RLLLSLKEAAKIIGTKGTKIQKVRDDNNVKIGISERKERCSDRILICTGS-----IEDVS 75
Query: 113 NALQQIAALIL------KDDDSNS---------EASKVAAGHVAAN-------------- 143
NA+ I ++L D+DSN E K +
Sbjct: 76 NAIGDICEILLSEDVVTNDEDSNEKENDEYNSIEDEKFVYPFLNFRLAKPTLDEVNDAET 135
Query: 144 -----TIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQ-LPLCASAHESDRVV 197
IR+L+ +Q +IG G I+ L + G + ++A NQ LP +R++
Sbjct: 136 LKKIINIRVLVTRAQCSAIIGTKGDRIKSLIENRG--VRMIASNQTLP-----DSDERLL 188
Query: 198 QISGDVPAVLNALVEIG 214
+I G A+ L +I
Sbjct: 189 EIQGTSMAITKVLEDIN 205
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 45 AKAQDVLFRIIV--PSRQIGKVIGKEGHRIQKIREETKATI---KIADAIARHEERVIII 99
+K+ D F+ IV P +G ++G++G+RI +R+ +K I K A ++ ER+ I
Sbjct: 242 SKSFDEEFKSIVKIPEAYVGAIVGRQGNRIANLRKYSKTKIVIEKRASEVSDDAERIFEI 301
Query: 100 SSKDNDNV 107
S D NV
Sbjct: 302 ISNDIKNV 309
>sp|O73932|IF23A_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-A OS=Xenopus
laevis GN=igf2bp3-a PE=1 SV=1
Length = 594
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 86/179 (48%), Gaps = 19/179 (10%)
Query: 44 RAKAQ-DVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA-DAIARHEERVIIISS 101
R K Q +V R++VP++ +G +IGKEG I+ I ++T++ I I A E+ I I S
Sbjct: 199 RPKPQTEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHS 258
Query: 102 KDNDNVVSDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMS 161
+ +A +I I++ + +++ ++ +++L + G LIG
Sbjct: 259 ------TPEGCSAACKIIMEIMQKEAQDTKFTEEIP-------LKILAHNNFVGRLIGKE 305
Query: 162 GQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLREN 220
G+N++K+ + I I L L + +R + + G + A EI ++RE+
Sbjct: 306 GRNLKKIEQDTDTKITISPLQDLTL----YNPERTITVKGSIEPCAKAEEEIMKKIRES 360
Score = 40.0 bits (92), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 90/219 (41%), Gaps = 51/219 (23%)
Query: 46 KAQDVLF------RIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA---DAIARHEERV 96
+AQD F +I+ + +G++IGKEG ++KI ++T I I+ D + ER
Sbjct: 277 EAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTLYNPERT 336
Query: 97 III------SSKDNDNVVSDAENALQQ-IAALILK------------------------- 124
I + +K + ++ + + IAA+ L+
Sbjct: 337 ITVKGSIEPCAKAEEEIMKKIRESYENDIAAMNLQAHLIPGLNLNALGLFPSSSSGMPPP 396
Query: 125 ----DDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILA 180
++S + + T+ L I G +IG GQ+I++L +GA+I I A
Sbjct: 397 SVGVPSPTSSTSYPPFGQQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKI-A 455
Query: 181 PNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRE 219
P + P R+V I+G A A I +L+E
Sbjct: 456 PAEGP-----DAKLRMVIITGPPEAQFKAQGRIYGKLKE 489
Score = 36.2 bits (82), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 20/154 (12%)
Query: 54 IIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEE-RVIIISSKDNDNVVSDAE 112
+ +P+ +G +IGK+G I+++ A+IKIA A + R++II+ +A+
Sbjct: 423 LFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGP------PEAQ 476
Query: 113 NALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLRNSS 172
Q LK+++ +V + + AG +IG G+ + +L+N +
Sbjct: 477 FKAQGRIYGKLKEENFFGPKEEVKL------ETHIKVPSYAAGRVIGKGGKTVNELQNLT 530
Query: 173 GATIVILAPNQLPLCASAHESDR-VVQISGDVPA 205
A +V+ P + E+D VV+I+G A
Sbjct: 531 SAEVVV------PRDQTPDENDEVVVKITGHFYA 558
>sp|O57526|IF23B_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-B OS=Xenopus
laevis GN=igf2bp3-b PE=1 SV=1
Length = 593
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 86/179 (48%), Gaps = 19/179 (10%)
Query: 44 RAKAQ-DVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA-DAIARHEERVIIISS 101
R K Q +V R++VP++ +G +IGKEG I+ I ++T++ I I A E+ I I S
Sbjct: 198 RPKPQSEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHS 257
Query: 102 KDNDNVVSDAENALQQIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMS 161
+ +A +I I++ + +++ ++ +++L + G LIG
Sbjct: 258 ------TPEGCSAACKIIMEIMQKEAQDTKFTEEIP-------LKILAHNNFVGRLIGKE 304
Query: 162 GQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLREN 220
G+N++K+ + I I L L + +R + + G + A E+ ++RE+
Sbjct: 305 GRNLKKIEQDTDTKITISPLQDLTL----YNPERTITVKGSIETCAKAEEEVMKKIRES 359
Score = 40.8 bits (94), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 51/219 (23%)
Query: 46 KAQDVLF------RIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA---DAIARHEERV 96
+AQD F +I+ + +G++IGKEG ++KI ++T I I+ D + ER
Sbjct: 276 EAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTLYNPERT 335
Query: 97 III------SSKDNDNVVSDAENALQQ-IAALILKD------------------------ 125
I + +K + V+ + + IAA+ L+
Sbjct: 336 ITVKGSIETCAKAEEEVMKKIRESYENDIAAMNLQAHLIPGLNLNALGLFPPSSSGMPPP 395
Query: 126 ----DDSNSEASKVAAGHV-AANTIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILA 180
+ AS G + T+ L I G +IG GQ+I++L +GA+I I A
Sbjct: 396 SAGVSSPTTSASYPPFGQQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKI-A 454
Query: 181 PNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRE 219
P + P R+V I+G A A I +L+E
Sbjct: 455 PAEGP-----DAKLRMVIITGPPEAQFKAQGRIYGKLKE 488
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 74/155 (47%), Gaps = 22/155 (14%)
Query: 54 IIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEE-RVIIISSKDNDNVVSDAE 112
+ +P+ +G +IGK+G I+++ A+IKIA A + R++II+ +A+
Sbjct: 422 LFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGP------PEAQ 475
Query: 113 NALQQIAALILKDDDSNSEASKVA-AGHVAANTIRLLIAGSQAGCLIGMSGQNIEKLRNS 171
Q LK+++ +V H+ + AG +IG G+ + +L+N
Sbjct: 476 FKAQGRIYGKLKEENFFGPKEEVKLEAHIK-------VPSYAAGRVIGKGGKTVNELQNL 528
Query: 172 SGATIVILAPNQLPLCASAHESDR-VVQISGDVPA 205
+ A +V+ P + E+D+ VV+I+G A
Sbjct: 529 TSAEVVV------PRDQTPDENDQVVVKITGHFYA 557
>sp|Q9JKN6|NOVA1_MOUSE RNA-binding protein Nova-1 OS=Mus musculus GN=Nova1 PE=1 SV=2
Length = 507
Score = 44.3 bits (103), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 87/212 (41%), Gaps = 48/212 (22%)
Query: 28 KRRREDGEIEGSDPKRRAKAQD--VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKI 85
++R + E KR +D ++++PS G +IGK G I ++++ET ATIK+
Sbjct: 26 RKRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL 85
Query: 86 A---DAIARHEERVIIISSKDNDNVVSDAENALQQIAALILKDDDSN---SEASKVAAGH 139
+ D ERV +I +A NA+ A +++ N +E +
Sbjct: 86 SKSKDFYPGTTERVCLIQG------TIEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQ 139
Query: 140 VA-----------------------------ANTIRLLIAGSQAGCLIGMSGQNIEKLRN 170
AN +++++ S AG +IG G ++ +
Sbjct: 140 TTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIME 199
Query: 171 SSGATIVILAPNQLPLCASAHESDRVVQISGD 202
SGA + + +Q P + E RVV +SG+
Sbjct: 200 QSGAWVQL---SQKPDGINLQE--RVVTVSGE 226
Score = 39.7 bits (91), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 39 SDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA---DAIARHEER 95
SDP ++A V +IIVP+ G +IGK G ++ I E++ A ++++ D I +ER
Sbjct: 163 SDPMTTSRANQV--KIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGI-NLQER 219
Query: 96 VIIISSKDNDN 106
V+ +S + N
Sbjct: 220 VVTVSGEPEQN 230
Score = 32.7 bits (73), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 145 IRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAHESDRVVQISGDVP 204
+++LI AG +IG GQ I +L+ +GATI + ++RV I G +
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDF----YPGTTERVCLIQGTIE 107
Query: 205 AVLNAL-VEIGNQLRENP 221
A LNA+ I ++RE P
Sbjct: 108 A-LNAVHGFIAEKIREMP 124
>sp|Q8UVD9|FUBP2_CHICK Far upstream element-binding protein 2 OS=Gallus gallus GN=KHSRP
PE=1 SV=1
Length = 769
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 79/169 (46%), Gaps = 20/169 (11%)
Query: 56 VPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVSDAENAL 115
VP +G +IG+ G +I KI++++ ++I+ ER + ++ + A+
Sbjct: 215 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTG---------SPEAV 265
Query: 116 QQIAALILKDDDSNSEASKVAAGHVAAN----TIR-LLIAGSQAGCLIGMSGQNIEKLRN 170
Q+ A L+L D S H AN T++ ++I +AG +IG G+ I++L+
Sbjct: 266 QK-AKLMLDDIVSRGRGGPPGQFHDYANGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQE 324
Query: 171 SSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRE 219
+G ++ + + D+ ++I GD V A + + LRE
Sbjct: 325 RAGVKMIFIQDG-----SQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 368
Score = 38.5 bits (88), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 20/131 (15%)
Query: 54 IIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNV------ 107
I++P+ + G VIGK G I++++E +A +K+ + I N NV
Sbjct: 301 IMIPAGKAGLVIGKGGETIKQLQE--RAGVKM----------IFIQDGSQNTNVDKPLRI 348
Query: 108 VSDAENALQ--QIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNI 165
+ D Q ++ IL++ D + G I + + G +IG SG+ I
Sbjct: 349 IGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMI 408
Query: 166 EKLRNSSGATI 176
+K++N +G I
Sbjct: 409 KKIQNDAGVRI 419
>sp|P51513|NOVA1_HUMAN RNA-binding protein Nova-1 OS=Homo sapiens GN=NOVA1 PE=1 SV=1
Length = 510
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 87/215 (40%), Gaps = 51/215 (23%)
Query: 28 KRRREDGEIEGSDPKRRAKAQD--VLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKI 85
++R + E KR +D ++++PS G +IGK G I ++++ET ATIK+
Sbjct: 26 RKRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL 85
Query: 86 A------DAIARHEERVIIISSKDNDNVVSDAENALQQIAALILKDDDSN---SEASKVA 136
+ D ERV +I +A NA+ A +++ N +E +
Sbjct: 86 SKLSKSKDFYPGTTERVCLIQG------TVEALNAVHGFIAEKIREMPQNVAKTEPVSIL 139
Query: 137 AGHVA-----------------------------ANTIRLLIAGSQAGCLIGMSGQNIEK 167
AN +++++ S AG +IG G ++
Sbjct: 140 QPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKA 199
Query: 168 LRNSSGATIVILAPNQLPLCASAHESDRVVQISGD 202
+ SGA + + +Q P + E RVV +SG+
Sbjct: 200 VMEQSGAWVQL---SQKPDGINLQE--RVVTVSGE 229
Score = 38.9 bits (89), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 39 SDPKRRAKAQDVLFRIIVPSRQIGKVIGKEGHRIQKIREETKATIKIA---DAIARHEER 95
SDP ++A V +IIVP+ G +IGK G ++ + E++ A ++++ D I +ER
Sbjct: 166 SDPMTTSRANQV--KIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGI-NLQER 222
Query: 96 VIIISSKDNDN 106
V+ +S + N
Sbjct: 223 VVTVSGEPEQN 233
Score = 32.7 bits (73), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 145 IRLLIAGSQAGCLIGMSGQNIEKLRNSSGATIVILAPNQLPLCASAH--ESDRVVQISGD 202
+++LI AG +IG GQ I +L+ +GATI + ++L + ++RV I G
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL---SKLSKSKDFYPGTTERVCLIQGT 108
Query: 203 VPAVLNAL-VEIGNQLRENP 221
V A LNA+ I ++RE P
Sbjct: 109 VEA-LNAVHGFIAEKIREMP 127
>sp|Q92945|FUBP2_HUMAN Far upstream element-binding protein 2 OS=Homo sapiens GN=KHSRP
PE=1 SV=4
Length = 711
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 80/170 (47%), Gaps = 21/170 (12%)
Query: 56 VPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVSDAENAL 115
VP +G +IG+ G +I KI++++ ++I+ ER + ++ A ++
Sbjct: 151 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTG---------APESV 201
Query: 116 QQIAALILKDDDSNSEASKVAAGHVAAN-----TIR-LLIAGSQAGCLIGMSGQNIEKLR 169
Q+ A ++L D S H AN T++ ++I +AG +IG G+ I++L+
Sbjct: 202 QK-AKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQ 260
Query: 170 NSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRE 219
+G ++++ + D+ ++I GD V A + + LRE
Sbjct: 261 ERAGVKMILIQDG-----SQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 305
Score = 38.1 bits (87), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 20/131 (15%)
Query: 54 IIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNV------ 107
I++P+ + G VIGK G I++++E +A +K+ ++I N NV
Sbjct: 238 IMIPAGKAGLVIGKGGETIKQLQE--RAGVKM----------ILIQDGSQNTNVDKPLRI 285
Query: 108 VSDAENALQ--QIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNI 165
+ D Q ++ IL++ D + G I + + G +IG SG+ I
Sbjct: 286 IGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMI 345
Query: 166 EKLRNSSGATI 176
+K++N +G I
Sbjct: 346 KKIQNDAGVRI 356
>sp|Q3U0V1|FUBP2_MOUSE Far upstream element-binding protein 2 OS=Mus musculus GN=Khsrp
PE=1 SV=2
Length = 748
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 80/170 (47%), Gaps = 21/170 (12%)
Query: 56 VPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNVVSDAENAL 115
VP +G +IG+ G +I KI++++ ++I+ ER + ++ A ++
Sbjct: 152 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTG---------APESV 202
Query: 116 QQIAALILKDDDSNSEASKVAAGHVAAN-----TIR-LLIAGSQAGCLIGMSGQNIEKLR 169
Q+ A ++L D S H AN T++ ++I +AG +IG G+ I++L+
Sbjct: 203 QK-AKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQ 261
Query: 170 NSSGATIVILAPNQLPLCASAHESDRVVQISGDVPAVLNALVEIGNQLRE 219
+G ++++ + D+ ++I GD V A + + LRE
Sbjct: 262 ERAGVKMILIQDG-----SQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 306
Score = 38.5 bits (88), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 20/131 (15%)
Query: 54 IIVPSRQIGKVIGKEGHRIQKIREETKATIKIADAIARHEERVIIISSKDNDNV------ 107
I++P+ + G VIGK G I++++E +A +K+ ++I N NV
Sbjct: 239 IMIPAGKAGLVIGKGGETIKQLQE--RAGVKM----------ILIQDGSQNTNVDKPLRI 286
Query: 108 VSDAENALQ--QIAALILKDDDSNSEASKVAAGHVAANTIRLLIAGSQAGCLIGMSGQNI 165
+ D Q ++ IL++ D + G I + + G +IG SG+ I
Sbjct: 287 IGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRVGGGIDVPVPRHSVGVVIGRSGEMI 346
Query: 166 EKLRNSSGATI 176
+K++N +G I
Sbjct: 347 KKIQNDAGVRI 357
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.130 0.354
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,899,898
Number of Sequences: 539616
Number of extensions: 3576297
Number of successful extensions: 11926
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 268
Number of HSP's that attempted gapping in prelim test: 11180
Number of HSP's gapped (non-prelim): 876
length of query: 257
length of database: 191,569,459
effective HSP length: 115
effective length of query: 142
effective length of database: 129,513,619
effective search space: 18390933898
effective search space used: 18390933898
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)