Query 025128
Match_columns 257
No_of_seqs 177 out of 1236
Neff 7.9
Searched_HMMs 46136
Date Fri Mar 29 02:56:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025128.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025128hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK04201 zinc transporter ZupT 100.0 1.8E-44 3.9E-49 316.5 28.9 237 2-247 1-264 (265)
2 COG0428 Predicted divalent hea 100.0 9.4E-38 2E-42 273.2 25.5 233 1-247 3-264 (266)
3 PF02535 Zip: ZIP Zinc transpo 100.0 1.8E-36 3.9E-41 271.5 23.5 232 10-243 6-316 (317)
4 PLN02159 Fe(2+) transport prot 100.0 5.5E-32 1.2E-36 243.3 27.2 231 10-244 49-334 (337)
5 TIGR00820 zip ZIP zinc/iron tr 100.0 3.1E-32 6.6E-37 245.0 19.3 234 9-245 20-322 (324)
6 KOG1558 Fe2+/Zn2+ regulated tr 100.0 9.5E-31 2.1E-35 233.4 23.0 235 8-245 19-325 (327)
7 KOG2694 Putative zinc transpor 99.9 8.6E-26 1.9E-30 190.7 18.5 235 9-246 68-359 (361)
8 KOG2693 Putative zinc transpor 99.9 6.2E-26 1.4E-30 209.7 5.8 241 4-244 132-450 (453)
9 KOG2474 Zinc transporter and r 99.5 1E-15 2.2E-20 136.8 0.3 239 2-241 42-398 (406)
10 KOG3907 ZIP-like zinc transpor 99.5 1.8E-17 4E-22 139.0 -12.1 201 31-255 28-303 (303)
11 PRK04201 zinc transporter ZupT 98.6 6.1E-07 1.3E-11 79.0 11.1 84 4-87 179-264 (265)
12 PF02535 Zip: ZIP Zinc transpo 98.4 2.9E-06 6.3E-11 75.9 10.0 80 4-83 228-316 (317)
13 COG0428 Predicted divalent hea 98.3 4.9E-06 1.1E-10 73.2 9.9 84 4-87 178-264 (266)
14 PLN02159 Fe(2+) transport prot 97.7 0.0004 8.8E-09 63.1 10.5 83 4-86 240-336 (337)
15 TIGR00820 zip ZIP zinc/iron tr 97.6 0.00072 1.6E-08 61.3 10.7 82 5-86 228-323 (324)
16 KOG1558 Fe2+/Zn2+ regulated tr 97.3 0.0023 5E-08 57.9 10.3 83 4-86 232-326 (327)
17 KOG2693 Putative zinc transpor 95.9 0.0034 7.3E-08 59.1 1.5 82 4-85 361-451 (453)
18 KOG2474 Zinc transporter and r 87.2 0.19 4E-06 46.1 0.1 82 4-85 316-402 (406)
19 KOG2694 Putative zinc transpor 66.3 15 0.00033 32.2 5.4 82 4-85 270-358 (361)
20 TIGR02840 spore_YtaF putative 64.8 63 0.0014 27.2 9.0 20 125-144 4-23 (206)
21 PRK11469 hypothetical protein; 62.1 91 0.002 25.9 11.1 21 125-145 7-27 (188)
22 PF14143 YrhC: YrhC-like prote 60.9 14 0.00031 25.8 3.6 33 204-238 19-51 (72)
23 PF07444 Ycf66_N: Ycf66 protei 52.3 47 0.001 24.0 5.1 48 192-240 5-52 (84)
24 PF06946 Phage_holin_5: Phage 44.4 1.3E+02 0.0027 22.2 8.5 55 32-90 31-85 (93)
25 COG5336 Uncharacterized protei 38.0 64 0.0014 24.5 4.1 28 37-64 46-73 (116)
26 PF06686 SpoIIIAC: Stage III s 36.2 1.2E+02 0.0027 19.7 5.9 43 21-63 11-53 (58)
27 COG5336 Uncharacterized protei 34.3 1.7E+02 0.0036 22.3 5.8 7 71-77 83-89 (116)
28 PRK00733 hppA membrane-bound p 34.0 5E+02 0.011 26.1 11.2 22 5-26 236-257 (666)
29 TIGR00753 undec_PP_bacA undeca 33.6 3.3E+02 0.0071 23.8 13.5 23 178-200 175-197 (255)
30 PF11833 DUF3353: Protein of u 31.4 2.4E+02 0.0052 23.6 7.1 41 19-59 123-166 (194)
31 PF03741 TerC: Integral membra 30.6 3.1E+02 0.0067 22.6 9.6 54 155-220 15-82 (183)
32 PF11190 DUF2976: Protein of u 30.3 2.1E+02 0.0047 20.7 6.3 46 204-250 35-84 (87)
33 KOG1397 Ca2+/H+ antiporter VCX 28.6 5E+02 0.011 24.4 11.9 16 8-23 160-175 (441)
34 TIGR03716 R_switched_YkoY inte 27.0 2.6E+02 0.0056 23.8 6.6 54 155-220 12-78 (215)
35 PF10767 DUF2593: Protein of u 26.1 1.7E+02 0.0037 23.2 4.8 21 40-60 82-102 (144)
36 PF02673 BacA: Bacitracin resi 25.8 4.5E+02 0.0098 23.0 20.9 24 177-200 174-197 (259)
37 PF04306 DUF456: Protein of un 24.9 3.4E+02 0.0074 21.3 12.3 81 124-210 9-95 (140)
38 PF03620 IBV_3C: IBV 3C protei 24.1 1.5E+02 0.0033 21.3 3.9 33 55-87 3-35 (93)
39 COG5548 Small integral membran 24.1 2.3E+02 0.0051 20.9 4.9 35 16-53 11-45 (105)
40 PRK12554 undecaprenyl pyrophos 24.0 5.1E+02 0.011 22.9 17.9 25 178-202 181-205 (276)
41 PF05437 AzlD: Branched-chain 23.3 2.9E+02 0.0063 19.8 8.3 31 30-60 26-57 (99)
42 PF11204 DUF2985: Protein of u 22.9 87 0.0019 22.4 2.5 32 196-227 6-44 (81)
43 PRK00281 undecaprenyl pyrophos 21.4 5.7E+02 0.012 22.5 19.0 24 178-201 179-202 (268)
44 TIGR03753 blh_monoox beta-caro 20.8 5.7E+02 0.012 22.3 8.6 91 156-246 3-104 (259)
45 COG2035 Predicted membrane pro 20.7 6E+02 0.013 22.6 10.1 56 31-87 213-271 (276)
46 PF03030 H_PPase: Inorganic H+ 20.4 9E+02 0.02 24.5 13.9 27 5-31 256-282 (682)
No 1
>PRK04201 zinc transporter ZupT; Provisional
Probab=100.00 E-value=1.8e-44 Score=316.49 Aligned_cols=237 Identities=40% Similarity=0.675 Sum_probs=203.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHh--------hhhHHHHHHH
Q 025128 2 VSQVLVALGLSLVGGLSTSIGALFVVLNEAPNLKVLGLLQGFAAGLMLSISFLDLAHNAINS--------IGFLKGNLWF 73 (257)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~~l~~l~afaaGvml~~~~~~llpea~~~--------~~~~~~~~~~ 73 (257)
+++.++++++++++++++.+|++++++.+++++|+++++++||+|+|+++++.|++||++|. .+++....++
T Consensus 1 ~~~~~~a~~~~~l~~~~t~lGal~~~~~~~~~~~~l~~~lafAaGvml~~~~~~LiPea~~~~~~~~~~~~~~~~~~~~~ 80 (265)
T PRK04201 1 MSNVSVALLLTLLAGLATGIGSLIAFFGKKPNNRFLSFSLGFAAGVMLYVSFMEILPKALAALTEAYGEGMGPWLGYGAF 80 (265)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccHHHHHHHH
Confidence 35788899999999999999999999888899999999999999999999999999999984 2355677899
Q ss_pred HHHHHHHHHHHHHcCCCCccCCCcccccccCCCCCCcchhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHhhccchhhH
Q 025128 74 FSGVIFFAIVANFIPEPSLAQGSDLTSKKKNKDEGGKDIMKKHRRQVLFSGIITAVGISLHNFPEGMAVFLGSMKGLRVG 153 (257)
Q Consensus 74 ~~G~~~~~~le~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lal~lHs~~eGlaiG~a~~~~~~~g 153 (257)
++|+++++.+|++.++.|.+++++. ++.+++ .+.+++..+.++++.+|+++||+|||+++|+++..+.+.|
T Consensus 81 ~~G~ll~~~ld~~~~~~~~~~~~~~---~~~~~~------~~~~~~~~~~~~~~~~a~~lH~~~eGlalg~~~~~~~~~g 151 (265)
T PRK04201 81 FGGILGIFLIDRLVPHENPHELMQK---EEMEFQ------QPLPKSLKRTGILTALAISIHNFPEGIATFVAALSNPELG 151 (265)
T ss_pred HHHHHHHHHHHHhccccCccccccc---cccccc------ccchHHHHHHHHHHHHHHHHHhcchhhhhhhhhhcchhhH
Confidence 9999999999999985443221100 000000 0112233456888999999999999999999998889999
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHhhcCCHHHHHHHHHHHhhHHHHHHHHH-------------------HHHHHHHHHHH
Q 025128 154 LNLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATLSGFAEPLGVIIV-------------------VGGVMAFLTLH 214 (257)
Q Consensus 154 ~~l~~ai~lH~ipeg~a~~~~l~~~g~s~~~~~~~~~~~~l~~plG~~ig-------------------aaG~~lyv~~~ 214 (257)
+.+++||++||+|||++++.++++++.+|+|++.+++++++++|+|+++| ++|+|+|++++
T Consensus 152 ~~~~~aI~~H~iPeg~a~~~~l~~~~~s~~~~~~~~~~~~l~~p~G~~~g~~~~~~~~~~~~~~~~l~~aaG~~lyv~~~ 231 (265)
T PRK04201 152 FPIALAIAIHNIPEGIAVAVPVYYATGSKKKAFLYSFLSGLAEPLGAVLGYLLLGPFISPVVMGAIFAAVAGIMVFISLD 231 (265)
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHHHHHHHccccchhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987 99999999999
Q ss_pred hhhHhhhhccChhHHHHHHHHHHHHHHHHHHHH
Q 025128 215 EMLPLAFDYAGQKQAVKAVFVGMAFMSASLYFL 247 (257)
Q Consensus 215 ellpe~~~~~~~~~~~~~~~~G~~l~~~~l~~~ 247 (257)
|++||++++++++..+.++++|+.+|++.++.+
T Consensus 232 el~pea~~~~~~~~~~~~~~~G~~~m~~~~~~~ 264 (265)
T PRK04201 232 ELLPAAKEYGPHHLPSYGLIAGMAVMALSLVLL 264 (265)
T ss_pred HHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHh
Confidence 999999998777778889999999999887654
No 2
>COG0428 Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.4e-38 Score=273.18 Aligned_cols=233 Identities=41% Similarity=0.630 Sum_probs=200.9
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHH-hhcCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHhhh--------hHHHHH
Q 025128 1 MVSQVLVALGLSLVGGLSTSIGALFVVL-NEAPNLKVLGLLQGFAAGLMLSISFLDLAHNAINSIG--------FLKGNL 71 (257)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~lG~~~~~~-~~~~~~~~l~~l~afaaGvml~~~~~~llpea~~~~~--------~~~~~~ 71 (257)
|+++....+..+++++++|.+|+.+.++ .++.++++.....+|++|+|++.++.+++|++.+..+ +.....
T Consensus 3 ~~~~~l~~~~~~ll~~~~t~lG~~~~~~~~~~~~~~~~~~~~gFa~Gvm~~as~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (266)
T COG0428 3 MSNSLLFALLLGLLAGLATALGALLVVLAVRKVSPRVLDILLGFAAGVMLAASFTSLLPPAIEASGVLGDSTHEFLPALA 82 (266)
T ss_pred cchhHHHHHHHHHHHHHHHHHhHHHHHHhhcccchHHHHHHHhhhhhHHHHHHHHHhcchHHhhhccccccchhhHHHHH
Confidence 4668888999999999999999999988 4789999999999999999999999999999988754 345678
Q ss_pred HHHHHHHHHHHHHHHcCCCCccCCCcccccccCCCCCCcchhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHhhccchh
Q 025128 72 WFFSGVIFFAIVANFIPEPSLAQGSDLTSKKKNKDEGGKDIMKKHRRQVLFSGIITAVGISLHNFPEGMAVFLGSMKGLR 151 (257)
Q Consensus 72 ~~~~G~~~~~~le~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lal~lHs~~eGlaiG~a~~~~~~ 151 (257)
+++.|..+++.+|++++|.|..++.+ +.| +.+++.++.++++++++++||||||+++|+++.++..
T Consensus 83 g~~~G~~~~~~~d~l~~h~h~~~~~~-------~~~-------~~~~~~~~~~~l~~lai~iHnfpEGlai~va~~~~~~ 148 (266)
T COG0428 83 GFLLGVLFIFLLDRLVPHEHEGKSVE-------GLE-------GLRKPNLRRGFLLALAISLHNFPEGLAIGVAFLSNPS 148 (266)
T ss_pred HHHHHHHHHHHHHHcCCccCCCCCcc-------ccc-------cccCcchhHHHHHHHHHHHhccchhHHHHHHHhccch
Confidence 89999999999999998655432100 001 1111113458889999999999999999999999989
Q ss_pred hHHHHHHHHHHhhhHHHHHHHHHHHhhcCCHHHHHHHHHHHhhHHHHHHHHH------------------HHHHHHHHHH
Q 025128 152 VGLNLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATLSGFAEPLGVIIV------------------VGGVMAFLTL 213 (257)
Q Consensus 152 ~g~~l~~ai~lH~ipeg~a~~~~l~~~g~s~~~~~~~~~~~~l~~plG~~ig------------------aaG~~lyv~~ 213 (257)
.|+.+++||.+||+|||++++.+++.++.+|+|++.++.++++.+|+|+++| ++|+|+|+++
T Consensus 149 ~gi~~alaI~ihnipEG~av~~pL~~~~~s~~~~l~~~~lsg~~~~lgavig~~~~~~~~~~~l~~~la~aaG~mv~v~~ 228 (266)
T COG0428 149 LGIALALAIAIHNIPEGLAVALPLAGAGRSRLKALLVAVLSGLAEPLGAVIGAYLLGISSPLVLPFALAFAAGAMVYVVV 228 (266)
T ss_pred HHHHHHHHHHHhccccHHHHHHHHHhcCCchHHHHHHHHHHHhHHHHHHHHHHHHHhhchHHHHHHHHHHHhhcchhhhH
Confidence 9999999999999999999999999999999999999999999999999997 9999999999
Q ss_pred HhhhHhhhhc--cChhHHHHHHHHHHHHHHHHHHHH
Q 025128 214 HEMLPLAFDY--AGQKQAVKAVFVGMAFMSASLYFL 247 (257)
Q Consensus 214 ~ellpe~~~~--~~~~~~~~~~~~G~~l~~~~l~~~ 247 (257)
.|++||++++ .++++.+.++.+|+.+|+++.+.+
T Consensus 229 ~eliPea~~~~~~~~~~~~~~~~~G~~~~~~l~~~l 264 (266)
T COG0428 229 DELLPEAKRHGGGSEKLATAGLFAGFLVMAVLDVLL 264 (266)
T ss_pred HHHhhHHHhcCCCchHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999995 466667889999999998766544
No 3
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=100.00 E-value=1.8e-36 Score=271.51 Aligned_cols=232 Identities=25% Similarity=0.383 Sum_probs=176.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhh-----cCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHhhh-----------hHHHHHHH
Q 025128 10 GLSLVGGLSTSIGALFVVLNE-----APNLKVLGLLQGFAAGLMLSISFLDLAHNAINSIG-----------FLKGNLWF 73 (257)
Q Consensus 10 ~~~~~~~~~~~lG~~~~~~~~-----~~~~~~l~~l~afaaGvml~~~~~~llpea~~~~~-----------~~~~~~~~ 73 (257)
...+...+.+.+|++++++.+ +.+++.+.++++|++|+|++++++|++||+++..+ ++.....+
T Consensus 6 ~~~~~i~~~s~lg~~~P~~~~~~~~~~~~~~~l~~~~~fa~GvlL~~a~~hLLPea~~~~~~~~~~~~~~~~~~~~~~~~ 85 (317)
T PF02535_consen 6 VAILAIFIVSLLGGLLPLLIRKFSKNRLNKRILSLLNAFAAGVLLGTAFLHLLPEAIEALESSGCFGEFGHSYPLAFLIF 85 (317)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHcCchhhcccccccccccccchhhhHHHHH
Confidence 344556667777777776653 46788999999999999999999999999998752 25677889
Q ss_pred HHHHHHHHHHHHHcCCC----CccCCCc--------cccc------c-------c-----CCCCC---C--cch-hhh-h
Q 025128 74 FSGVIFFAIVANFIPEP----SLAQGSD--------LTSK------K-------K-----NKDEG---G--KDI-MKK-H 116 (257)
Q Consensus 74 ~~G~~~~~~le~~~~~~----~~~~~~~--------~~~~------~-------~-----~~~~~---~--~~~-~~~-~ 116 (257)
++|+++++++|+++++. |.+.+++ .+.+ . . +++++ + .+. .++ .
T Consensus 86 ~~Gfl~~~~ie~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (317)
T PF02535_consen 86 LVGFLLFFFIERILHSIFEHDHSHSHDHSHSHSSSELNSDEPSNSVSSSEIEDDSNSEHSDQNSHHSHSSHSHSHHDDKS 165 (317)
T ss_pred HHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccCccccccccCCcccccccccccccccccccccccccc
Confidence 99999999999988321 1111100 0000 0 0 00000 0 000 000 0
Q ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHHHhhccchhhHHHHHHHHHHhhhHHHHHHHHHHHhhcCCHHHHHHHHHHHhhHH
Q 025128 117 RRQVLFSGIITAVGISLHNFPEGMAVFLGSMKGLRVGLNLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATLSGFAE 196 (257)
Q Consensus 117 ~~~~~~~~~~l~lal~lHs~~eGlaiG~a~~~~~~~g~~l~~ai~lH~ipeg~a~~~~l~~~g~s~~~~~~~~~~~~l~~ 196 (257)
+.+..+.++++.+|+++||++||+++|+++..+. ++.++++|++||+||+++++.++++++.++++++.+++++++++
T Consensus 166 ~~~~~~~~~~l~~~~~~Hs~~eGl~ig~~~~~~~--~~~~~~ai~~Hk~~e~~~~~~~l~~~~~~~~~~~~~~~~~sl~~ 243 (317)
T PF02535_consen 166 GVSQNIRALILLIALSIHSFFEGLAIGAAFSSDS--GWSLFIAIILHKIPEGFALGSILVKAGFSKRKALLLLLLFSLST 243 (317)
T ss_pred hhhhhHHHHHHHHHHHhhcchhhhhhhcchhhhh--HHHHHHHHHHhHhHHHhhhhhhhhhhccccchhhHHHHHHHHHH
Confidence 1111124888999999999999999999876554 89999999999999999999999999999999999999999999
Q ss_pred HHHHHHH----------------------HHHHHHHHHHHhhhHhhhhccCh----hHHHHHHHHHHHHHHHH
Q 025128 197 PLGVIIV----------------------VGGVMAFLTLHEMLPLAFDYAGQ----KQAVKAVFVGMAFMSAS 243 (257)
Q Consensus 197 plG~~ig----------------------aaG~~lyv~~~ellpe~~~~~~~----~~~~~~~~~G~~l~~~~ 243 (257)
|+|+++| ++|+|+||++.|++||++++.+. ..++.++++|+++|+++
T Consensus 244 piG~~ig~~~~~~~~~~~~~~~~~~~~a~aaG~~lyv~~~ell~~~~~~~~~~~~~~~~~~~~~~G~~~~~~l 316 (317)
T PF02535_consen 244 PIGALIGIAISNSGSSSSSDIVSGILLAFAAGTFLYVAFVELLPEEFHNKHSRKSRLLKFLGFLIGFLLMALL 316 (317)
T ss_pred HHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHH
Confidence 9999988 99999999999999999998763 34567899999999764
No 4
>PLN02159 Fe(2+) transport protein
Probab=100.00 E-value=5.5e-32 Score=243.32 Aligned_cols=231 Identities=15% Similarity=0.219 Sum_probs=168.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhc-----CchhHHHHHHHHHHHHHHHHHHHHhhHHHHHhhh-----------hHHHHHHH
Q 025128 10 GLSLVGGLSTSIGALFVVLNEA-----PNLKVLGLLQGFAAGLMLSISFLDLAHNAINSIG-----------FLKGNLWF 73 (257)
Q Consensus 10 ~~~~~~~~~~~lG~~~~~~~~~-----~~~~~l~~l~afaaGvml~~~~~~llpea~~~~~-----------~~~~~~~~ 73 (257)
...++....+.+|+++++..|+ .+++.+.++.+|++|+++++++.|++||+.|..+ |++....+
T Consensus 49 ~al~vil~~sllg~~lP~~~~~~~~~~~~~~~~~~~~~FagGV~Lat~flHLLp~a~e~l~~~cl~~~~~~~yP~~~~i~ 128 (337)
T PLN02159 49 IAIVAILTTSMIGVTAPLFSRYVSFLRPDGNIFTIVKCFASGIILGTGFMHVLPDSFEMLSSKCLEDNPWHKFPFAGFVA 128 (337)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccccCCchhHHHHHHHHhhhHhHHHHHHHhhhHHHHhhhchhhcCCCcccCchHHHHH
Confidence 4445566677888887766543 4567789999999999999999999999997653 34566777
Q ss_pred HHHHHHHHHHHHHcCC----CCccCCCcccccccCCCC--CCcch--hhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHh
Q 025128 74 FSGVIFFAIVANFIPE----PSLAQGSDLTSKKKNKDE--GGKDI--MKKHRRQVLFSGIITAVGISLHNFPEGMAVFLG 145 (257)
Q Consensus 74 ~~G~~~~~~le~~~~~----~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~l~lal~lHs~~eGlaiG~a 145 (257)
++|+++++++|.+..+ ++..+..+.+.+.++++. ...+. .+..|++ ..++++.+|+++||++||+++|++
T Consensus 129 ~~g~~l~~liE~~~~~~~~~~~~~~~~~~h~h~~~~~~~~~~~~~~~~~~~r~~--~~a~~l~~gl~lHS~~eGlalG~~ 206 (337)
T PLN02159 129 MLSGLVTLAIDSMATSLYTSKNSVGPMPDHGHSHGHGVVLKTKDDGNAQLLRYR--VIAMVLELGIIVHSVVIGLSLGAT 206 (337)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCcccccCcccccccccccccccchhHHHHH--HHHHHHHHHHHHHHHHhchhhhcC
Confidence 8899999999987532 111000000000000000 00010 0111222 246889999999999999999998
Q ss_pred hccchhhHHHHHHHHHHhhhHHHHHHHHHHHhhcCCHHHHHHHHHHHhhHHHHHHHHH----------------------
Q 025128 146 SMKGLRVGLNLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATLSGFAEPLGVIIV---------------------- 203 (257)
Q Consensus 146 ~~~~~~~g~~l~~ai~lH~ipeg~a~~~~l~~~g~s~~~~~~~~~~~~l~~plG~~ig---------------------- 203 (257)
+..+... .+.+||.+||+|||++++.++.+++.++++.+.+++++++++|+|.++|
T Consensus 207 ~~~~~~~--~l~~AI~~Hk~~eg~aLg~~L~~~~~~~~~~~~~~~~fal~tPiG~~iG~~v~~~~~~~~~~~~~~~gil~ 284 (337)
T PLN02159 207 NDTCTIK--GLIAALCFHQMFEGMGLGGCILQAEYTNVKKFLMAFFFAVTTPFGIFLGIALSSIYRDNSPTALITVGLLN 284 (337)
T ss_pred CCchhHH--HHHHHHHHHhhHHHHHHHHHHHhccCcHHHHHHHHHHHHHhcHHHHHHHHHHHhhcccccchHHHHHHHHH
Confidence 6544433 4677999999999999999999999999999999999999999999987
Q ss_pred --HHHHHHHHHHHhhhHhhhhccC----hh---HHHHHHHHHHHHHHHHH
Q 025128 204 --VGGVMAFLTLHEMLPLAFDYAG----QK---QAVKAVFVGMAFMSASL 244 (257)
Q Consensus 204 --aaG~~lyv~~~ellpe~~~~~~----~~---~~~~~~~~G~~l~~~~l 244 (257)
++|+|+|+++.|++|++...++ .+ ..+.++++|+++|+++.
T Consensus 285 a~aaG~flYv~~~Ell~~e~~~~~~~~~~~~~~~~~~~l~~G~~~Mall~ 334 (337)
T PLN02159 285 ACSAGLLIYMALVDLLAAEFMGPKLQGSIKLQIKCFFAALLGCGGMSIVA 334 (337)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999998754332 11 23468999999998764
No 5
>TIGR00820 zip ZIP zinc/iron transport family. transport has not been characterized, but these systems probably function as secondary carriers.
Probab=100.00 E-value=3.1e-32 Score=245.01 Aligned_cols=234 Identities=18% Similarity=0.240 Sum_probs=170.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc-----CchhHHHHHHHHHHHHHHHHHHHHhhHHHHHhhh-----------hHHHHHH
Q 025128 9 LGLSLVGGLSTSIGALFVVLNEA-----PNLKVLGLLQGFAAGLMLSISFLDLAHNAINSIG-----------FLKGNLW 72 (257)
Q Consensus 9 ~~~~~~~~~~~~lG~~~~~~~~~-----~~~~~l~~l~afaaGvml~~~~~~llpea~~~~~-----------~~~~~~~ 72 (257)
+...++..+.+.+|++++...|+ .+++.+.++.+|++||+|++++.||+||+.|..+ |++....
T Consensus 20 i~~lfvil~~slig~~lP~i~~~~~~~~~~~~~~~~~k~FagGVfLATafvHLLp~a~e~l~~~cl~~~~~~~yP~~~~i 99 (324)
T TIGR00820 20 IVAIFSILLASVIGVMFPLIGKNVPSLRPEGNFFFVAKAFAAGVILATGFMHVLPEAFEMLSSPCLESTPWGKFPFAGFI 99 (324)
T ss_pred HHHHHHHHHHHHHHHhhHHHhhhccccCCCcchhHHHHHhccceeeeeeeeeeccHHHHhhcCcccCCCCCCcCCHHHHH
Confidence 34455566777888887765443 3346789999999999999999999999998642 4566777
Q ss_pred HHHHHHHHHHHHHHcC----CCCccC---CCcc-----cccccC--CC---CC--Ccc---hhhhhhhHHHHHHHHHHHH
Q 025128 73 FFSGVIFFAIVANFIP----EPSLAQ---GSDL-----TSKKKN--KD---EG--GKD---IMKKHRRQVLFSGIITAVG 130 (257)
Q Consensus 73 ~~~G~~~~~~le~~~~----~~~~~~---~~~~-----~~~~~~--~~---~~--~~~---~~~~~~~~~~~~~~~l~la 130 (257)
+++|+++++++|.+.. +++.++ +++. +.++.+ ++ +. +.+ ...+..++. ...+++.+|
T Consensus 100 ~~~g~~l~~~iE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~g 178 (324)
T TIGR00820 100 AMISAILTLLVDLFATSYYERKHGKGDHGSKEIKVGDGEEGTAGGTKHGHEYYEDHVHTNSEVVQLLRQR-VVAQVLELG 178 (324)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccCCCCCcccccccccccCCCCCCCCCccccccccccccchhhHHHHH-HHHHHHHHH
Confidence 8899999999997643 211110 0000 000000 00 00 000 001111111 247788999
Q ss_pred HHhhhhhHHHHHHHhhccchhhHHHHHHHHHHhhhHHHHHHHHHHHhhcCCHHHHHHHHHHHhhHHHHHHHHH-------
Q 025128 131 ISLHNFPEGMAVFLGSMKGLRVGLNLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATLSGFAEPLGVIIV------- 203 (257)
Q Consensus 131 l~lHs~~eGlaiG~a~~~~~~~g~~l~~ai~lH~ipeg~a~~~~l~~~g~s~~~~~~~~~~~~l~~plG~~ig------- 203 (257)
+++||++||+++|++.. ....+.+++||++||+|||++++.++.+++.++++.+.+++++++++|+|+++|
T Consensus 179 l~~Hs~~eGlalG~~~~--~~~~~~l~~Ai~~Hk~~eg~alg~~l~~~~~~~~~~~~~~~~fsl~tPiG~~iG~~~~~~~ 256 (324)
T TIGR00820 179 IIVHSVVIGLSLGASQS--PDTIKPLIAALSFHQFFEGLGLGGCISQAEFKCKSVTIMCTFFAVTTPLGIAIGMGISSSY 256 (324)
T ss_pred HHhcchhhhhhhhhccC--cchHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhHHHHHHHHHHhccc
Confidence 99999999999999853 345689999999999999999999999999999999999999999999999998
Q ss_pred -----------------HHHHHHHHHHHhhhHhhhhccC----hh---HHHHHHHHHHHHHHHHHH
Q 025128 204 -----------------VGGVMAFLTLHEMLPLAFDYAG----QK---QAVKAVFVGMAFMSASLY 245 (257)
Q Consensus 204 -----------------aaG~~lyv~~~ellpe~~~~~~----~~---~~~~~~~~G~~l~~~~l~ 245 (257)
++|+|+||++.|++|++...++ .+ .++.++++|+++|+++..
T Consensus 257 ~~~~~~~~~~~gil~~~aaG~flYv~~~Ell~~e~~~~~~~~~~~~~~~~~~~~~~G~~~Ma~l~~ 322 (324)
T TIGR00820 257 DDSSPTALIVEGVLNAASAGILIYMALVDLLAADFMHPKMQSNLRLQIMAYIALLLGAGLMSLLAK 322 (324)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998764432 12 234689999999987653
No 6
>KOG1558 consensus Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism]
Probab=99.98 E-value=9.5e-31 Score=233.38 Aligned_cols=235 Identities=20% Similarity=0.324 Sum_probs=179.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh-----cCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHhhh-----------hHHHHH
Q 025128 8 ALGLSLVGGLSTSIGALFVVLNE-----APNLKVLGLLQGFAAGLMLSISFLDLAHNAINSIG-----------FLKGNL 71 (257)
Q Consensus 8 ~~~~~~~~~~~~~lG~~~~~~~~-----~~~~~~l~~l~afaaGvml~~~~~~llpea~~~~~-----------~~~~~~ 71 (257)
-+...++..+++.+|++++++.+ +.+++.+.+..+|++||+|+++|.|++||+.|..+ ++++..
T Consensus 19 Ki~ai~vil~~s~i~~~~Pl~~~~~~~~~~~~~~~~~~kcFa~GViLaT~FlH~Lpd~~E~l~~~~~~~~~~~~fp~~~~ 98 (327)
T KOG1558|consen 19 KIVAIFVILLLSLIGGLLPLFVRRTSALQPESRFLSLVKCFAGGVILATGFLHLLPDAFEALESLCLADNPWGKFPFAEF 98 (327)
T ss_pred HHHHHHHHHHHHHHHhcchHhhccccccCCccchHHHHHHHhccHHHHHHHHHhChhHHHHhhcccccCCCCcCCChHHH
Confidence 34556666778888888887765 45678899999999999999999999999998752 557777
Q ss_pred HHHHHHHHHHHHHHHcC----CCCccC-CC------ccccc------cc-----CCCCCCcch-----hhhhhhHHHHHH
Q 025128 72 WFFSGVIFFAIVANFIP----EPSLAQ-GS------DLTSK------KK-----NKDEGGKDI-----MKKHRRQVLFSG 124 (257)
Q Consensus 72 ~~~~G~~~~~~le~~~~----~~~~~~-~~------~~~~~------~~-----~~~~~~~~~-----~~~~~~~~~~~~ 124 (257)
..++|+++.+++|.+.+ |+|.++ +. +.+.. .+ ++++.+++. .++.+.+.. .+
T Consensus 99 i~~~gf~l~l~id~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 177 (327)
T KOG1558|consen 99 IAMLGFFLTLLIDEITTSYVGHGHSHKKRNEVAVSEEGEDLRAVGNGEHGAIHVGHSHGHSEPSTPGVVDDGQASRL-RS 177 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccccccccCCcCcCcccccccccCCccccCCCCCCCCCCCCccccchhhhhhH-HH
Confidence 78899999999998764 333211 00 00000 00 000000000 011111222 36
Q ss_pred HHHHHHHHhhhhhHHHHHHHhhccchhhHHHHHHHHHHhhhHHHHHHHHHHHhhcCCHHHHHHHHHHHhhHHHHHHHHH-
Q 025128 125 IITAVGISLHNFPEGMAVFLGSMKGLRVGLNLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATLSGFAEPLGVIIV- 203 (257)
Q Consensus 125 ~~l~lal~lHs~~eGlaiG~a~~~~~~~g~~l~~ai~lH~ipeg~a~~~~l~~~g~s~~~~~~~~~~~~l~~plG~~ig- 203 (257)
+.+.+|+++||++||+++|++ .+....+.+..|+.+||.-||++++.++.+++.+++.++.+++.+++++|+|..+|
T Consensus 178 ~iL~lgi~~HSvfeGlalGv~--~~~~ti~~L~~al~fHk~fegf~lG~~l~~a~~~~~~~~~~~~~fslttPiGi~iG~ 255 (327)
T KOG1558|consen 178 LILELGLSFHSVFEGLALGVQ--DSVSTIWTLFLALSFHKLFEGFGLGGCLLQAGFTFKSAVLMALFFSLTTPIGIALGI 255 (327)
T ss_pred HHHHHHHHHHHHHHhhhcccc--CCHHHHHHHHHHHHHHHHHHHhcccHHHhhcccchHHHHHHHHHHHHHhHHHHHHHH
Confidence 778999999999999999996 45678899999999999999999999999999999999999999999999999998
Q ss_pred ----------------------HHHHHHHHHHHhhhHhhhhccC-----hh-HHHHHHHHHHHHHHHHHH
Q 025128 204 ----------------------VGGVMAFLTLHEMLPLAFDYAG-----QK-QAVKAVFVGMAFMSASLY 245 (257)
Q Consensus 204 ----------------------aaG~~lyv~~~ellpe~~~~~~-----~~-~~~~~~~~G~~l~~~~l~ 245 (257)
|+|+++|+++.|++|+++.+.+ .+ ..+++.++|+++|.++..
T Consensus 256 ~i~~~~~~s~~~~i~~gvL~alAaGtliY~~lvElla~ef~~~~~~~~~~~i~~~i~~~~G~alms~l~~ 325 (327)
T KOG1558|consen 256 GISSSYENSPGALITSGVLEALAAGTLIYVALVELLAAEFANPKMQSLKLQILKLIALLLGFALMSLLAI 325 (327)
T ss_pred HhcccccCCchhHHHHHHHHHHhhhHhHHHHHHHHhHHHhcCchhhhHHHHHHHHHHHHHhHHHHHHHHH
Confidence 9999999999999999887755 22 346799999999987764
No 7
>KOG2694 consensus Putative zinc transporter [Inorganic ion transport and metabolism]
Probab=99.94 E-value=8.6e-26 Score=190.73 Aligned_cols=235 Identities=21% Similarity=0.292 Sum_probs=178.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHh----------hcCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHhhh--------hHHHH
Q 025128 9 LGLSLVGGLSTSIGALFVVLN----------EAPNLKVLGLLQGFAAGLMLSISFLDLAHNAINSIG--------FLKGN 70 (257)
Q Consensus 9 ~~~~~~~~~~~~lG~~~~~~~----------~~~~~~~l~~l~afaaGvml~~~~~~llpea~~~~~--------~~~~~ 70 (257)
|+++++.+....+-++.+.+. ....+|.+..+++||.|-+++.+|+|++||++|..+ .....
T Consensus 68 Wi~sLlGs~~vglsGifPl~~iP~e~~~~l~s~ag~~rL~~LLsFAiGgLLgdVFLHLLPEAwe~~n~~p~~e~sl~siG 147 (361)
T KOG2694|consen 68 WIYSLLGSSLVGLSGIFPLFLIPAEIHVLLSSSAGQRRLNLLLSFAIGGLLGDVFLHLLPEAWESNNQDPSSENSLSSIG 147 (361)
T ss_pred hHHHHhhhHHHhhcccceeeeechhhhhhccCchhHHHHHHHHHHHHhhHHHHHHHHhCHHHHhccCCCCCCCCchhhhh
Confidence 566666666555544443332 123467899999999999999999999999998752 12357
Q ss_pred HHHHHHHHHHHHHHHHcCCCCcc-CC-Ccc-cccccC----C-------CCC-CcchhhhhhhHHHHHHHHHHHHHHhhh
Q 025128 71 LWFFSGVIFFAIVANFIPEPSLA-QG-SDL-TSKKKN----K-------DEG-GKDIMKKHRRQVLFSGIITAVGISLHN 135 (257)
Q Consensus 71 ~~~~~G~~~~~~le~~~~~~~~~-~~-~~~-~~~~~~----~-------~~~-~~~~~~~~~~~~~~~~~~l~lal~lHs 135 (257)
++.+.|++.+..+|+++...... ++ .+. +..+.+ + +|+ .++...+ +.+..+|+..++-.++|
T Consensus 148 LwVlaGiLtF~~ieK~f~ss~EE~~~q~p~~~~~~ac~~~~g~~c~~r~~~q~~~~~~~q---~~kvagYLNLlAN~iDN 224 (361)
T KOG2694|consen 148 LWVLAGILTFSLIEKLFASSEEEQHKQSPSAHFLNACGGACGKVCFLREQEQKSKERKEQ---PKKVAGYLNLLANIIDN 224 (361)
T ss_pred HHHHHHHHHHHHHHHHHhcchhhccccCCCcchhhHhhhccccceecchhhccccccccc---chhHHHHHHHHHHhhhh
Confidence 89999999999999988422111 11 000 000011 0 011 1111112 22346999999999999
Q ss_pred hhHHHHHHHhhccchhhHHHHHHHHHHhhhHHHHHHHHHHHhhcCCHHHHHHHHHHHhhHHHHHHHHH------------
Q 025128 136 FPEGMAVFLGSMKGLRVGLNLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATLSGFAEPLGVIIV------------ 203 (257)
Q Consensus 136 ~~eGlaiG~a~~~~~~~g~~l~~ai~lH~ipeg~a~~~~l~~~g~s~~~~~~~~~~~~l~~plG~~ig------------ 203 (257)
|..|+|++.+|..+.+.|+..+++|.+||||+++++++.++++|++||.+......++....+|+.+.
T Consensus 225 FtHGLAVa~SFLVS~k~GiltT~aILLHEIPHEvgDFAILLRagF~rw~Aa~aQL~TA~~GlLGalvAi~g~~g~~pa~E 304 (361)
T KOG2694|consen 225 FTHGLAVASSFLVSTKFGILTTIAILLHEIPHEVGDFAILLRAGFGRWNAALAQLTTAAFGLLGALVAIHGHTGNVPAIE 304 (361)
T ss_pred hhhhhHHhhhhhhhhhhhHHHHHHHHHhhccchhhhhHHHHHhccchhHHHHHHHHHHHHHHhhhHHHhhcCcCCchhhh
Confidence 99999999999999999999999999999999999999999999999999998888888888887775
Q ss_pred ---------HHHHHHHHHHHhhhHhhhhccChhH---HHHHHHHHHHHHHHHHHH
Q 025128 204 ---------VGGVMAFLTLHEMLPLAFDYAGQKQ---AVKAVFVGMAFMSASLYF 246 (257)
Q Consensus 204 ---------aaG~~lyv~~~ellpe~~~~~~~~~---~~~~~~~G~~l~~~~l~~ 246 (257)
.+|.|+||+..|++|+-.+...++. .++.++.|+++|.++..+
T Consensus 305 ~~tsw~lPFTaGGFL~IALv~vLPdll~Ee~p~eslkQLl~lv~Gi~~M~~~sl~ 359 (361)
T KOG2694|consen 305 TRTSWLLPFTAGGFLNIALVEVLPDLLAEESPVESLKQLLMLVTGILTMSFLSLS 359 (361)
T ss_pred hhcceeeeeccCceeehhHHHhhhHhhhccCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8999999999999999888766553 467899999999876544
No 8
>KOG2693 consensus Putative zinc transporter [Inorganic ion transport and metabolism]
Probab=99.92 E-value=6.2e-26 Score=209.71 Aligned_cols=241 Identities=20% Similarity=0.254 Sum_probs=169.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhc--CchhHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhh------HHHHHHHHH
Q 025128 4 QVLVALGLSLVGGLSTSIGALFVVLNEA--PNLKVLGLLQGFAAGLMLSISFLDLAHNAINSIGF------LKGNLWFFS 75 (257)
Q Consensus 4 ~~~~~~~~~~~~~~~~~lG~~~~~~~~~--~~~~~l~~l~afaaGvml~~~~~~llpea~~~~~~------~~~~~~~~~ 75 (257)
.|.+++...++.+++..+|.++..+.++ ..++.+.++.++|.|.+++.++++++||+++..+. .....-+..
T Consensus 132 ~w~~g~~a~~lisl~~~l~l~lvP~~~~~~~~~~~l~~l~a~a~gtL~gDa~lhLiP~~l~~~~~~~~~~s~~~~~~~~~ 211 (453)
T KOG2693|consen 132 LWLYGILATLLISLAPLLGLLLVPLRKNSKKKLELLIFLLALAVGTLLGDALLHLIPEALGFHSHLSNGVSHVTSLAMTG 211 (453)
T ss_pred eEEechHHHHHHHHHHhhheeeccccccchhHHHHHHHHHHHHHhhhhHHHHhhhCchhcccccCccCCcccccchhhcc
Confidence 4556778888888998888766655433 45778899999999999999999999999874210 000011111
Q ss_pred H-------------------HHHHHHHHHHcC---C-----CCccCCCcc-----cccc----cCC-C---CC-C--cch
Q 025128 76 G-------------------VIFFAIVANFIP---E-----PSLAQGSDL-----TSKK----KNK-D---EG-G--KDI 112 (257)
Q Consensus 76 G-------------------~~~~~~le~~~~---~-----~~~~~~~~~-----~~~~----~~~-~---~~-~--~~~ 112 (257)
| ...+...++... + .|.+.+.+. +.++ .+. | ++ + .+.
T Consensus 212 g~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~~~~gh~h~~~~~~~~~~e~~~~~~~~~~~d~~~~~~~~~~~~ 291 (453)
T KOG2693|consen 212 GKYHFFSNESNLSIFLAVLGVSLLFVTEKNMRALKGGGKHHGHSHGHSNTYNPGSEKITLNVKDGVGDSVSLSSSSFEHK 291 (453)
T ss_pred cceeeecccccceeeeeeechHHhhccccchhhccCCCCCCCccCCcCCCcCcccccccccccccCCCccccCCcchhcc
Confidence 1 111222222111 1 011111100 0000 000 0 00 0 000
Q ss_pred hhh-hhhHHHHHHHHHHHHHHhhhhhHHHHHHHhhccchhhHHHHHHHHHHhhhHHHHHHHHHHHhhcCCHHHHHHHHHH
Q 025128 113 MKK-HRRQVLFSGIITAVGISLHNFPEGMAVFLGSMKGLRVGLNLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATL 191 (257)
Q Consensus 113 ~~~-~~~~~~~~~~~l~lal~lHs~~eGlaiG~a~~~~~~~g~~l~~ai~lH~ipeg~a~~~~l~~~g~s~~~~~~~~~~ 191 (257)
.++ .......++|++++|+++|||.||+|+|++|..+...|+++.+|+.+||+|+++++.+.|+++|++.+|++.++++
T Consensus 292 ~~~~~~~~l~~~aymil~gD~~HNFtDGLAiGAaF~~s~~~G~sTsiAVlcHElPHELGDFAILl~sG~s~kqAl~lnll 371 (453)
T KOG2693|consen 292 LEEFEVEELKKVAYMILAGDGLHNFTDGLAIGAAFTSSLLHGISTSLAVLCHEFPHELGDFAILLRSGLSVKQALLLNLL 371 (453)
T ss_pred cccccccchhhHhHHHHhccccccchhhhhhccccccccchhHHHHHHHHHHhccHHHHHHHHHHHcCCcHHHHHHHHHH
Confidence 001 1233445799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhHHHHHHHHH------------------HHHHHHHHHHHhhhHhhhhccChh---H-----HHHHHHHHHHHHHHHH
Q 025128 192 SGFAEPLGVIIV------------------VGGVMAFLTLHEMLPLAFDYAGQK---Q-----AVKAVFVGMAFMSASL 244 (257)
Q Consensus 192 ~~l~~plG~~ig------------------aaG~~lyv~~~ellpe~~~~~~~~---~-----~~~~~~~G~~l~~~~l 244 (257)
+++++.+|..+| +||.|+||+..+++||..+..+.+ + +..+++.|+.+|+++.
T Consensus 372 sal~a~~G~~ig~~~~~~~~~~~~~~I~a~taG~FlYIAl~~m~Pem~~~~~~~~~~~~~~~lq~~gil~G~~~ml~ia 450 (453)
T KOG2693|consen 372 SALTAFAGLAIGLVLGAGDEEELSSWILAFTAGMFLYIALVDVLPEMLESKNSVKKRKFCFALQIFGILAGFTIMLLIA 450 (453)
T ss_pred hHHHHHhhhheeEEecCCCccchHHHHHHHhcCcEEEEEehhhchhhhhccccchhHHHHHHHHHHHHHhhhHHHhhhh
Confidence 999999999987 899999999999999998876543 1 1357899999987543
No 9
>KOG2474 consensus Zinc transporter and related ZIP domain-containing proteins [Inorganic ion transport and metabolism]
Probab=99.54 E-value=1e-15 Score=136.82 Aligned_cols=239 Identities=29% Similarity=0.417 Sum_probs=145.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHhhHHH---HHhhh----hH-HHHHHH
Q 025128 2 VSQVLVALGLSLVGGLSTSIGALFVVLNEAPNLKVLGLLQGFAAGLMLSISFLDLAHNA---INSIG----FL-KGNLWF 73 (257)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~~l~~l~afaaGvml~~~~~~llpea---~~~~~----~~-~~~~~~ 73 (257)
.++..++.+.+++.+..|.+|+.+.++.+..++|++...++||+|+|++.++..++.++ +|... +. +...-.
T Consensus 42 ~~sv~~all~tl~~~~~tslga~~vv~~~~~~~~~l~~~lGfAaGvmLaaSf~S~l~~s~h~le~a~s~g~f~~~~f~~~ 121 (406)
T KOG2474|consen 42 INSVRQALLGTLLLGGLTSLGAAYVVLVEANSRKVLDISLGFAAGVMLAASFWSLLAHSDHDLEMAESSGGFFKWAFSPV 121 (406)
T ss_pred cchHHHHHHHHHHHHHHHhcccceEEEEecCchhhhhhhhchhhhHHHHHHHHHhhccccchhhhhhccchhhhhhhhhh
Confidence 45778889999999999999998887777778899999999999999999999888777 44321 11 111111
Q ss_pred HHHHHH------------HHHHH--HHcCCCCccCC----------Ccc---------cc--------------------
Q 025128 74 FSGVIF------------FAIVA--NFIPEPSLAQG----------SDL---------TS-------------------- 100 (257)
Q Consensus 74 ~~G~~~------------~~~le--~~~~~~~~~~~----------~~~---------~~-------------------- 100 (257)
..++.+ .+..| ++.++..+... .+. ++
T Consensus 122 a~~f~i~~~~~~~~~a~kv~l~d~~~l~~~~~~~~~~~~t~~~qs~~~~~~~~~~s~~~~n~P~glav~~~~~~~~~~g~ 201 (406)
T KOG2474|consen 122 ANGFLITKDSDRGLGAKKVHLADLLRLLSSLGCADGNKCTPLLQSELPAYIACTSSISESNVPEGLAVSSLSGSSNRSGV 201 (406)
T ss_pred ccccceeecccccccceeEeeeeheeeeccccccCCcccccccccccCccchhhhhhhhcCCCccceecccccccccccc
Confidence 122211 11112 11110000000 000 00
Q ss_pred cc-------------cCCCCCC---------cchhhhhhhHHHHHHHHHHHHHHhhhhhHHH-HHHHhhcc-------ch
Q 025128 101 KK-------------KNKDEGG---------KDIMKKHRRQVLFSGIITAVGISLHNFPEGM-AVFLGSMK-------GL 150 (257)
Q Consensus 101 ~~-------------~~~~~~~---------~~~~~~~~~~~~~~~~~l~lal~lHs~~eGl-aiG~a~~~-------~~ 150 (257)
+. ++.++.+ +|.......++.+ --.....+..||.|||+ ++++++.. ..
T Consensus 202 ~~~~~~~~~~~~~A~hss~~~~ay~~~~P~~~~~~~~a~~sw~~-i~l~~~~~~~h~~P~g~~~I~va~~~alst~pE~F 280 (406)
T KOG2474|consen 202 NLNEERSLLRDSSAHHSSDEGPAYGSNLPSGNDVEEAAASSWRR-IHLLTLSITVHNHPEGLIGIQVALGAALSTFPEGF 280 (406)
T ss_pred cccchhhccchhhcccCCcccccccccCCCCCccccchhhhhHH-HhhhcchhhcccCcchhhHHHHHHHhhhhcCcHHH
Confidence 00 0000000 0000000111222 22346788899999998 77776641 00
Q ss_pred hhHH--HHHHHHH---HhhhHHHHHHHHHHHhhcCCHHHHHHHHHH-HhhHHHHHHHHH------------------HHH
Q 025128 151 RVGL--NLAVAIA---LHNIPEGVAVALPVYFATQSKWQAFKLATL-SGFAEPLGVIIV------------------VGG 206 (257)
Q Consensus 151 ~~g~--~l~~ai~---lH~ipeg~a~~~~l~~~g~s~~~~~~~~~~-~~l~~plG~~ig------------------aaG 206 (257)
..-. ....++. +||+|||++++.++..++.+|||++++... .++..|+|.+++ ++|
T Consensus 281 e~~~ns~~a~Gf~v~li~nf~Eglavslpl~~a~~Sr~~afl~~a~~g~~s~~lGll~a~~v~la~~igl~~~~~a~aaG 360 (406)
T KOG2474|consen 281 ESFYNSSLAIGFGVFLIHNFVEGLAVSLPLAGAGFSRLKAFLYGAVLGGVSPPLGLLIAFAVFLAEPIGLLPYALAFAAG 360 (406)
T ss_pred HHHhccccccchhHHHHhcccccceeeeehhhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHhcCccchhhHHHHHhcc
Confidence 1111 1333343 999999999999999999999999998655 566777888776 999
Q ss_pred HHHHHHHHhhhHhhhhccChhHHHHHHHHH---HHHHH
Q 025128 207 VMAFLTLHEMLPLAFDYAGQKQAVKAVFVG---MAFMS 241 (257)
Q Consensus 207 ~~lyv~~~ellpe~~~~~~~~~~~~~~~~G---~~l~~ 241 (257)
+++|+...+++||+.++++.+..-.+.++| ++++.
T Consensus 361 ~ml~~~~~~~i~~a~~~~~~~~~s~~~i~~~~~~~v~l 398 (406)
T KOG2474|consen 361 AMLYVVLDDIIPEAQRSDNSKLASLGTICGKWCFLVTL 398 (406)
T ss_pred ceEEEEeccccccccccccccccccccchhhhhHHHHH
Confidence 999999999999999887766443333333 55554
No 10
>KOG3907 consensus ZIP-like zinc transporter proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.51 E-value=1.8e-17 Score=139.04 Aligned_cols=201 Identities=17% Similarity=0.241 Sum_probs=143.6
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHhhh---------------------------------------hHHHHH
Q 025128 31 APNLKVLGLLQGFAAGLMLSISFLDLAHNAINSIG---------------------------------------FLKGNL 71 (257)
Q Consensus 31 ~~~~~~l~~l~afaaGvml~~~~~~llpea~~~~~---------------------------------------~~~~~~ 71 (257)
+.+++.+....-+.+|.+.++++..++||..+.+- ..+...
T Consensus 28 ~~se~rl~lvtv~GAgll~gtAl~viIpegv~sly~~~~~~~~~g~~~~~~~~~~~vIp~~i~a~v~~~~~~~~~~~IG~ 107 (303)
T KOG3907|consen 28 ILSEERLKLVTVLGAGLLVGTALTVIIPEGVSSLYVKIAVLSILGIGMLLGTSFMLVIPEGIKAEVEHDGHVGVHALIGF 107 (303)
T ss_pred ecchhheEEEEeecccceecceeEEEecccHHHHhhhHHHHhhhccchhcccccceeccccceeeeeecCCcChheeeeH
Confidence 45566666777788888888888889998775521 013344
Q ss_pred HHHHHHHHHHHHHHHcCCCCccCCCcccccccCCCCCCcchhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHhhcc-ch
Q 025128 72 WFFSGVIFFAIVANFIPEPSLAQGSDLTSKKKNKDEGGKDIMKKHRRQVLFSGIITAVGISLHNFPEGMAVFLGSMK-GL 150 (257)
Q Consensus 72 ~~~~G~~~~~~le~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lal~lHs~~eGlaiG~a~~~-~~ 150 (257)
...+|+.++++.|+.-. .+.++..+ . +.+|.+.- -....+|+.+|..-||+|+|++... +.
T Consensus 108 slVLgfv~mLlVdqi~t-v~~h~~v~--------~-------~a~rs~in--~~t~tlgLvVHaaaDGVALGaaattn~~ 169 (303)
T KOG3907|consen 108 SLVLGFVFMLLVDQIGT-VYVHSNVK--------F-------QAGRSIIN--HITVTLGLVVHAAADGVALGAAATTNND 169 (303)
T ss_pred HHHHHHHHHHhhhcccc-EEEecccc--------h-------hhhhhccc--cceeEEEEEEeeccccceecccccccCC
Confidence 56678888888776432 11111100 0 01111110 1235789999999999999976543 45
Q ss_pred hhHHHHHHHHHHhhhHHHHHHHHHHHhhcCCHHHHHHHHHHHhhHHHHHHHHH-----------------------HHHH
Q 025128 151 RVGLNLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATLSGFAEPLGVIIV-----------------------VGGV 207 (257)
Q Consensus 151 ~~g~~l~~ai~lH~ipeg~a~~~~l~~~g~s~~~~~~~~~~~~l~~plG~~ig-----------------------aaG~ 207 (257)
..-+.+++||.+||.|..|++..-+..++..||+...-.++|++++|+|.++- +||+
T Consensus 170 svqiIVfvAImlHKaPAafgLvSfll~e~l~r~~Irkhl~lFa~saPl~~ivt~lli~q~s~~m~~~satGvlmLfSaGt 249 (303)
T KOG3907|consen 170 SVQIIVFVAIMLHKAPAAFGLVSFLLHENLDRWEIRKHLVLFALSAPLGYIVTYLLILQHSKTMLSESATGVLMLFSAGT 249 (303)
T ss_pred cEEEeehhHHHHhcccHHHHHHHHHHHhhhHHHHHhhheEEEeccCcHHHHHHHHhhhccChhhhhhhhcceeeeecCCe
Confidence 67788999999999999999999999999999999999999999999998874 9999
Q ss_pred HHHHHHHhhhHhhhhccCh------------hHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 025128 208 MAFLTLHEMLPLAFDYAGQ------------KQAVKAVFVGMAFMSASLYFLEISLPAEM 255 (257)
Q Consensus 208 ~lyv~~~ellpe~~~~~~~------------~~~~~~~~~G~~l~~~~l~~~~~~~~~~~ 255 (257)
|+|+++...+||..+.++. +.-...+++|..+-.++ ..||+|
T Consensus 250 fLYvatvhvlpe~~~~dh~l~vea~~g~~l~~~E~v~li~G~~iPlIi------s~ghsh 303 (303)
T KOG3907|consen 250 FLYVATVHVLPELSHTDHSLSVEATGGAVLPHDELVYLIIGALIPLII------SYGHSH 303 (303)
T ss_pred eEEEEEEEEccccCCCCcccccccccccccchhHHHHHHHhHHHHHHH------HhccCC
Confidence 9999999999997663221 12245788888776543 346665
No 11
>PRK04201 zinc transporter ZupT; Provisional
Probab=98.57 E-value=6.1e-07 Score=78.96 Aligned_cols=84 Identities=21% Similarity=0.216 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhc--CchhHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhhHHHHHHHHHHHHHHH
Q 025128 4 QVLVALGLSLVGGLSTSIGALFVVLNEA--PNLKVLGLLQGFAAGLMLSISFLDLAHNAINSIGFLKGNLWFFSGVIFFA 81 (257)
Q Consensus 4 ~~~~~~~~~~~~~~~~~lG~~~~~~~~~--~~~~~l~~l~afaaGvml~~~~~~llpea~~~~~~~~~~~~~~~G~~~~~ 81 (257)
++++++.+.++.++++++|++++++..+ .++....++++|++|.|+++++.|++||+.|..+......++++|+.++.
T Consensus 179 s~~~~~~~~~~~~l~~p~G~~~g~~~~~~~~~~~~~~~~l~~aaG~~lyv~~~el~pea~~~~~~~~~~~~~~~G~~~m~ 258 (265)
T PRK04201 179 SKKKAFLYSFLSGLAEPLGAVLGYLLLGPFISPVVMGAIFAAVAGIMVFISLDELLPAAKEYGPHHLPSYGLIAGMAVMA 258 (265)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHH
Confidence 4677888899999999999999987643 46778899999999999999999999999987555567889999999988
Q ss_pred HHHHHc
Q 025128 82 IVANFI 87 (257)
Q Consensus 82 ~le~~~ 87 (257)
..+...
T Consensus 259 ~~~~~~ 264 (265)
T PRK04201 259 LSLVLL 264 (265)
T ss_pred HHHHHh
Confidence 877554
No 12
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=98.35 E-value=2.9e-06 Score=75.92 Aligned_cols=80 Identities=33% Similarity=0.389 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-----hcCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHhhh----hHHHHHHHH
Q 025128 4 QVLVALGLSLVGGLSTSIGALFVVLN-----EAPNLKVLGLLQGFAAGLMLSISFLDLAHNAINSIG----FLKGNLWFF 74 (257)
Q Consensus 4 ~~~~~~~~~~~~~~~~~lG~~~~~~~-----~~~~~~~l~~l~afaaGvml~~~~~~llpea~~~~~----~~~~~~~~~ 74 (257)
+.++++.+.++.++++++|++++... ...++....++++|++|.++++++.|++||..++.. .....++++
T Consensus 228 ~~~~~~~~~~~~sl~~piG~~ig~~~~~~~~~~~~~~~~~~~~a~aaG~~lyv~~~ell~~~~~~~~~~~~~~~~~~~~~ 307 (317)
T PF02535_consen 228 SKRKALLLLLLFSLSTPIGALIGIAISNSGSSSSSDIVSGILLAFAAGTFLYVAFVELLPEEFHNKHSRKSRLLKFLGFL 307 (317)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHH
Confidence 45677889999999999999999988 556778899999999999999999999999998765 345678889
Q ss_pred HHHHHHHHH
Q 025128 75 SGVIFFAIV 83 (257)
Q Consensus 75 ~G~~~~~~l 83 (257)
+|+.++.++
T Consensus 308 ~G~~~~~~l 316 (317)
T PF02535_consen 308 IGFLLMALL 316 (317)
T ss_pred HHHHHHHHH
Confidence 999888765
No 13
>COG0428 Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism]
Probab=98.30 E-value=4.9e-06 Score=73.24 Aligned_cols=84 Identities=23% Similarity=0.267 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCch-hHHHHHHHHHHHHHHHHHHHHhhHHHHHh--hhhHHHHHHHHHHHHHH
Q 025128 4 QVLVALGLSLVGGLSTSIGALFVVLNEAPNL-KVLGLLQGFAAGLMLSISFLDLAHNAINS--IGFLKGNLWFFSGVIFF 80 (257)
Q Consensus 4 ~~~~~~~~~~~~~~~~~lG~~~~~~~~~~~~-~~l~~l~afaaGvml~~~~~~llpea~~~--~~~~~~~~~~~~G~~~~ 80 (257)
++++++.++.+.+++..+|++++++.-+.++ ..+++.++|++|.|+++++-|++||+.+. .+......++++|+.++
T Consensus 178 s~~~~l~~~~lsg~~~~lgavig~~~~~~~~~~~l~~~la~aaG~mv~v~~~eliPea~~~~~~~~~~~~~~~~~G~~~~ 257 (266)
T COG0428 178 SRLKALLVAVLSGLAEPLGAVIGAYLLGISSPLVLPFALAFAAGAMVYVVVDELLPEAKRHGGGSEKLATAGLFAGFLVM 257 (266)
T ss_pred chHHHHHHHHHHHhHHHHHHHHHHHHHhhchHHHHHHHHHHHhhcchhhhHHHHhhHHHhcCCCchHHHHHHHHHHHHHH
Confidence 5678999999999999999999776655555 89999999999999999999999999995 34455778999999999
Q ss_pred HHHHHHc
Q 025128 81 AIVANFI 87 (257)
Q Consensus 81 ~~le~~~ 87 (257)
+.+|..+
T Consensus 258 ~~l~~~l 264 (266)
T COG0428 258 AVLDVLL 264 (266)
T ss_pred HHHHHhh
Confidence 9988654
No 14
>PLN02159 Fe(2+) transport protein
Probab=97.67 E-value=0.0004 Score=63.09 Aligned_cols=83 Identities=18% Similarity=0.227 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcC----ch---hHHHHHHHHHHHHHHHHHHHHhhHHHHHhhh-------hHHH
Q 025128 4 QVLVALGLSLVGGLSTSIGALFVVLNEAP----NL---KVLGLLQGFAAGLMLSISFLDLAHNAINSIG-------FLKG 69 (257)
Q Consensus 4 ~~~~~~~~~~~~~~~~~lG~~~~~~~~~~----~~---~~l~~l~afaaGvml~~~~~~llpea~~~~~-------~~~~ 69 (257)
+.++.+.+.++.++++++|..++....+. ++ .....+.++|+|+|+|+++.|++|+-+.... ....
T Consensus 240 ~~~~~~~~~~~fal~tPiG~~iG~~v~~~~~~~~~~~~~~~gil~a~aaG~flYv~~~Ell~~e~~~~~~~~~~~~~~~~ 319 (337)
T PLN02159 240 TNVKKFLMAFFFAVTTPFGIFLGIALSSIYRDNSPTALITVGLLNACSAGLLIYMALVDLLAAEFMGPKLQGSIKLQIKC 319 (337)
T ss_pred cHHHHHHHHHHHHHhcHHHHHHHHHHHhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccHHHHHHH
Confidence 34567788899999999999998766432 11 3568999999999999999999998553221 1244
Q ss_pred HHHHHHHHHHHHHHHHH
Q 025128 70 NLWFFSGVIFFAIVANF 86 (257)
Q Consensus 70 ~~~~~~G~~~~~~le~~ 86 (257)
.+.+++|+..|.++.+|
T Consensus 320 ~~~l~~G~~~Mall~~w 336 (337)
T PLN02159 320 FFAALLGCGGMSIVAKW 336 (337)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 56788999999888765
No 15
>TIGR00820 zip ZIP zinc/iron transport family. transport has not been characterized, but these systems probably function as secondary carriers.
Probab=97.57 E-value=0.00072 Score=61.26 Aligned_cols=82 Identities=13% Similarity=0.177 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcC----ch---hHHHHHHHHHHHHHHHHHHHHhhHHHHHhh-------hhHHHH
Q 025128 5 VLVALGLSLVGGLSTSIGALFVVLNEAP----NL---KVLGLLQGFAAGLMLSISFLDLAHNAINSI-------GFLKGN 70 (257)
Q Consensus 5 ~~~~~~~~~~~~~~~~lG~~~~~~~~~~----~~---~~l~~l~afaaGvml~~~~~~llpea~~~~-------~~~~~~ 70 (257)
.++.+.+.++.++++++|..++...... ++ .....+.++|+|+|+|+++.|++|+-+... ......
T Consensus 228 ~~~~~~~~~~fsl~tPiG~~iG~~~~~~~~~~~~~~~~~~gil~~~aaG~flYv~~~Ell~~e~~~~~~~~~~~~~~~~~ 307 (324)
T TIGR00820 228 CKSVTIMCTFFAVTTPLGIAIGMGISSSYDDSSPTALIVEGVLNAASAGILIYMALVDLLAADFMHPKMQSNLRLQIMAY 307 (324)
T ss_pred chHHHHHHHHHHHhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHHH
Confidence 4557788889999999999998766432 22 356899999999999999999999765332 123455
Q ss_pred HHHHHHHHHHHHHHHH
Q 025128 71 LWFFSGVIFFAIVANF 86 (257)
Q Consensus 71 ~~~~~G~~~~~~le~~ 86 (257)
+.+++|+..|.++.+|
T Consensus 308 ~~~~~G~~~Ma~l~~w 323 (324)
T TIGR00820 308 IALLLGAGLMSLLAKW 323 (324)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 6788999999888765
No 16
>KOG1558 consensus Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism]
Probab=97.29 E-value=0.0023 Score=57.86 Aligned_cols=83 Identities=18% Similarity=0.263 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhc------CchhHHHHHHHHHHHHHHHHHHHHhhHHHHHhhh------hHHHHH
Q 025128 4 QVLVALGLSLVGGLSTSIGALFVVLNEA------PNLKVLGLLQGFAAGLMLSISFLDLAHNAINSIG------FLKGNL 71 (257)
Q Consensus 4 ~~~~~~~~~~~~~~~~~lG~~~~~~~~~------~~~~~l~~l~afaaGvml~~~~~~llpea~~~~~------~~~~~~ 71 (257)
+.+.++.+.++-++.|++|..++....+ .......++.++|+|+++|++++|++|+-+.+.. .....+
T Consensus 232 ~~~~~~~~~~~fslttPiGi~iG~~i~~~~~~s~~~~i~~gvL~alAaGtliY~~lvElla~ef~~~~~~~~~~~i~~~i 311 (327)
T KOG1558|consen 232 TFKSAVLMALFFSLTTPIGIALGIGISSSYENSPGALITSGVLEALAAGTLIYVALVELLAAEFANPKMQSLKLQILKLI 311 (327)
T ss_pred chHHHHHHHHHHHHHhHHHHHHHHHhcccccCCchhHHHHHHHHHHhhhHhHHHHHHHHhHHHhcCchhhhHHHHHHHHH
Confidence 5677888899999999999888876644 2344678999999999999999999998765522 234567
Q ss_pred HHHHHHHHHHHHHHH
Q 025128 72 WFFSGVIFFAIVANF 86 (257)
Q Consensus 72 ~~~~G~~~~~~le~~ 86 (257)
..++|+.+|..+..|
T Consensus 312 ~~~~G~alms~l~~w 326 (327)
T KOG1558|consen 312 ALLLGFALMSLLAIW 326 (327)
T ss_pred HHHHhHHHHHHHHHh
Confidence 778999888877654
No 17
>KOG2693 consensus Putative zinc transporter [Inorganic ion transport and metabolism]
Probab=95.93 E-value=0.0034 Score=59.09 Aligned_cols=82 Identities=21% Similarity=0.264 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcC-chhHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhh--------HHHHHHHH
Q 025128 4 QVLVALGLSLVGGLSTSIGALFVVLNEAP-NLKVLGLLQGFAAGLMLSISFLDLAHNAINSIGF--------LKGNLWFF 74 (257)
Q Consensus 4 ~~~~~~~~~~~~~~~~~lG~~~~~~~~~~-~~~~l~~l~afaaGvml~~~~~~llpea~~~~~~--------~~~~~~~~ 74 (257)
...+++++.+++++...+|..++.+.... .+....++.++++|.++++++.+++||-.+..+. ..=.++++
T Consensus 361 s~kqAl~lnllsal~a~~G~~ig~~~~~~~~~~~~~~I~a~taG~FlYIAl~~m~Pem~~~~~~~~~~~~~~~lq~~gil 440 (453)
T KOG2693|consen 361 SVKQALLLNLLSALTAFAGLAIGLVLGAGDEEELSSWILAFTAGMFLYIALVDVLPEMLESKNSVKKRKFCFALQIFGIL 440 (453)
T ss_pred cHHHHHHHHHHhHHHHHhhhheeEEecCCCccchHHHHHHHhcCcEEEEEehhhchhhhhccccchhHHHHHHHHHHHHH
Confidence 35788999999999999999998887665 5677789999999999999999999998876531 12246788
Q ss_pred HHHHHHHHHHH
Q 025128 75 SGVIFFAIVAN 85 (257)
Q Consensus 75 ~G~~~~~~le~ 85 (257)
.|+.+|+++..
T Consensus 441 ~G~~~ml~ia~ 451 (453)
T KOG2693|consen 441 AGFTIMLLIAL 451 (453)
T ss_pred hhhHHHhhhhc
Confidence 99988888754
No 18
>KOG2474 consensus Zinc transporter and related ZIP domain-containing proteins [Inorganic ion transport and metabolism]
Probab=87.24 E-value=0.19 Score=46.15 Aligned_cols=82 Identities=24% Similarity=0.203 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHhhc-CchhHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhhHHHHHHHHHH---HH
Q 025128 4 QVLVALGLSLVGG-LSTSIGALFVVLNEA-PNLKVLGLLQGFAAGLMLSISFLDLAHNAINSIGFLKGNLWFFSG---VI 78 (257)
Q Consensus 4 ~~~~~~~~~~~~~-~~~~lG~~~~~~~~~-~~~~~l~~l~afaaGvml~~~~~~llpea~~~~~~~~~~~~~~~G---~~ 78 (257)
.+|++++++-+.+ ..-.+|.+.++..-. -..+.+++.+++++|+|+++..-+++||+.........-.+.+++ ++
T Consensus 316 Sr~~afl~~a~~g~~s~~lGll~a~~v~la~~igl~~~~~a~aaG~ml~~~~~~~i~~a~~~~~~~~~s~~~i~~~~~~~ 395 (406)
T KOG2474|consen 316 SRLKAFLYGAVLGGVSPPLGLLIAFAVFLAEPIGLLPYALAFAAGAMLYVVLDDIIPEAQRSDNSKLASLGTICGKWCFL 395 (406)
T ss_pred HHHHHHHHHHHhhcchhhHHHHHHHHHHhcCccchhhHHHHHhccceEEEEeccccccccccccccccccccchhhhhHH
Confidence 3566766666655 466667776665422 223368999999999999999999999987654322122222222 55
Q ss_pred HHHHHHH
Q 025128 79 FFAIVAN 85 (257)
Q Consensus 79 ~~~~le~ 85 (257)
+++.+|-
T Consensus 396 v~l~l~~ 402 (406)
T KOG2474|consen 396 VTLILDV 402 (406)
T ss_pred HHHHHHH
Confidence 5555553
No 19
>KOG2694 consensus Putative zinc transporter [Inorganic ion transport and metabolism]
Probab=66.29 E-value=15 Score=32.24 Aligned_cols=82 Identities=17% Similarity=0.187 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhc----CchhHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhhH---HHHHHHHHH
Q 025128 4 QVLVALGLSLVGGLSTSIGALFVVLNEA----PNLKVLGLLQGFAAGLMLSISFLDLAHNAINSIGFL---KGNLWFFSG 76 (257)
Q Consensus 4 ~~~~~~~~~~~~~~~~~lG~~~~~~~~~----~~~~~l~~l~afaaGvml~~~~~~llpea~~~~~~~---~~~~~~~~G 76 (257)
.+|.+...-+..+..-.+|+++...-.. .-+...++++-|.+|=++.+++.+++||-.++.+.+ .-.+..+.|
T Consensus 270 ~rw~Aa~aQL~TA~~GlLGalvAi~g~~g~~pa~E~~tsw~lPFTaGGFL~IALv~vLPdll~Ee~p~eslkQLl~lv~G 349 (361)
T KOG2694|consen 270 GRWNAALAQLTTAAFGLLGALVAIHGHTGNVPAIETRTSWLLPFTAGGFLNIALVEVLPDLLAEESPVESLKQLLMLVTG 349 (361)
T ss_pred chhHHHHHHHHHHHHHHhhhHHHhhcCcCCchhhhhhcceeeeeccCceeehhHHHhhhHhhhccCHHHHHHHHHHHHHH
Confidence 3455656666666666777776653221 123445678899999999999999999988664322 234556778
Q ss_pred HHHHHHHHH
Q 025128 77 VIFFAIVAN 85 (257)
Q Consensus 77 ~~~~~~le~ 85 (257)
+..|.++.-
T Consensus 350 i~~M~~~sl 358 (361)
T KOG2694|consen 350 ILTMSFLSL 358 (361)
T ss_pred HHHHHHHHH
Confidence 877776643
No 20
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=64.78 E-value=63 Score=27.20 Aligned_cols=20 Identities=35% Similarity=0.511 Sum_probs=12.6
Q ss_pred HHHHHHHHhhhhhHHHHHHH
Q 025128 125 IITAVGISLHNFPEGMAVFL 144 (257)
Q Consensus 125 ~~l~lal~lHs~~eGlaiG~ 144 (257)
+++.+++++++|.-|++.|.
T Consensus 4 ~llaials~Daf~vgi~~G~ 23 (206)
T TIGR02840 4 LLLAFAVSLDSFGVGIAYGL 23 (206)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34566677777666666663
No 21
>PRK11469 hypothetical protein; Provisional
Probab=62.14 E-value=91 Score=25.88 Aligned_cols=21 Identities=19% Similarity=0.363 Sum_probs=13.4
Q ss_pred HHHHHHHHhhhhhHHHHHHHh
Q 025128 125 IITAVGISLHNFPEGMAVFLG 145 (257)
Q Consensus 125 ~~l~lal~lHs~~eGlaiG~a 145 (257)
+++.+++++++|.-+++.|..
T Consensus 7 ~llaialsmDaF~v~ia~G~~ 27 (188)
T PRK11469 7 VLLAFGMSMDAFAASIGKGAT 27 (188)
T ss_pred HHHHHHHHHHHHHHHHHhhhc
Confidence 445667777777666666653
No 22
>PF14143 YrhC: YrhC-like protein
Probab=60.90 E-value=14 Score=25.78 Aligned_cols=33 Identities=9% Similarity=0.165 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHhhhHhhhhccChhHHHHHHHHHHH
Q 025128 204 VGGVMAFLTLHEMLPLAFDYAGQKQAVKAVFVGMA 238 (257)
Q Consensus 204 aaG~~lyv~~~ellpe~~~~~~~~~~~~~~~~G~~ 238 (257)
|-++|+|++. ++|.......++...+....+++
T Consensus 19 Avs~FlYiG~--viP~~~~~~~~~~~m~~~~~~~l 51 (72)
T PF14143_consen 19 AVSTFLYIGT--VIPIGAKETAQKYIMMGAICIFL 51 (72)
T ss_pred HHHHHHHHHh--hCCccchhHHHHHHHHHHHHHHH
Confidence 6789999998 78844333333333333333333
No 23
>PF07444 Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR010004 This entry represents Ycf66, a protein that is restricted to the chloroplasts of simple plants and algae. It is also found in the cyanobacteria. The function is unknown. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=52.28 E-value=47 Score=23.97 Aligned_cols=48 Identities=19% Similarity=0.292 Sum_probs=31.6
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHhhhHhhhhccChhHHHHHHHHHHHHH
Q 025128 192 SGFAEPLGVIIVVGGVMAFLTLHEMLPLAFDYAGQKQAVKAVFVGMAFM 240 (257)
Q Consensus 192 ~~l~~plG~~igaaG~~lyv~~~ellpe~~~~~~~~~~~~~~~~G~~l~ 240 (257)
++-...+|..++.+|..+|. ....-||.+++...-...++++.|..+.
T Consensus 5 ~~~~~iLgi~l~~~~~~Ly~-lr~~~Pev~Rd~D~~fs~vgLl~g~IL~ 52 (84)
T PF07444_consen 5 FGPSYILGIILILGGLALYF-LRFFRPEVSRDYDIFFSSVGLLYGLILW 52 (84)
T ss_pred cCHHHHHHHHHHHHHHHHHH-HHHHCcchhhhhhHHHHHHHHHHHHHHH
Confidence 34456678888888888996 4567788877654444445555555444
No 24
>PF06946 Phage_holin_5: Phage holin; InterPro: IPR009708 This entry represents the Bacteriophage A118, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=44.41 E-value=1.3e+02 Score=22.19 Aligned_cols=55 Identities=15% Similarity=0.060 Sum_probs=33.9
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHcCCC
Q 025128 32 PNLKVLGLLQGFAAGLMLSISFLDLAHNAINSIGFLKGNLWFFSGVIFFAIVANFIPEP 90 (257)
Q Consensus 32 ~~~~~l~~l~afaaGvml~~~~~~llpea~~~~~~~~~~~~~~~G~~~~~~le~~~~~~ 90 (257)
.++|+++. +++..|++++.... .+|...+. ......|.+.|....-+.|.+.++.
T Consensus 31 v~~K~iPl-Is~viGilLG~~~~-~~~~~~~l--~~~~~aG~laGlAaTGL~e~~t~r~ 85 (93)
T PF06946_consen 31 VPNKWIPL-ISVVIGILLGAAAY-PLTGDGNL--ALMAWAGGLAGLAATGLFEQFTNRS 85 (93)
T ss_pred CCcchhhH-HHHHHHHHHHHHhh-hcCCCccH--HHHHHHHHHhhhhhhhHHHHHHhhh
Confidence 46777776 66778888888643 33321111 1234567788887777777766543
No 25
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=38.02 E-value=64 Score=24.48 Aligned_cols=28 Identities=14% Similarity=0.191 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHhh
Q 025128 37 LGLLQGFAAGLMLSISFLDLAHNAINSI 64 (257)
Q Consensus 37 l~~l~afaaGvml~~~~~~llpea~~~~ 64 (257)
+.+..=|-+|+|+++.+--++-+-....
T Consensus 46 ~klssefIsGilVGa~iG~llD~~agTs 73 (116)
T COG5336 46 FKLSSEFISGILVGAGIGWLLDKFAGTS 73 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 4556678899999997666665544443
No 26
>PF06686 SpoIIIAC: Stage III sporulation protein AC/AD protein family
Probab=36.22 E-value=1.2e+02 Score=19.74 Aligned_cols=43 Identities=14% Similarity=0.235 Sum_probs=30.8
Q ss_pred HHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHh
Q 025128 21 IGALFVVLNEAPNLKVLGLLQGFAAGLMLSISFLDLAHNAINS 63 (257)
Q Consensus 21 lG~~~~~~~~~~~~~~l~~l~afaaGvml~~~~~~llpea~~~ 63 (257)
++.+.....|+..++-++....+++|+++.......+-+-++.
T Consensus 11 i~~~l~~vlk~~~~~e~a~~isla~~i~I~~~~~~~i~~l~~~ 53 (58)
T PF06686_consen 11 IAAFLALVLKQAGEPEYASLISLAGGILIFLLVLPKISSLFET 53 (58)
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555556666577899999999999988877777665543
No 27
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=34.30 E-value=1.7e+02 Score=22.28 Aligned_cols=7 Identities=57% Similarity=0.614 Sum_probs=2.9
Q ss_pred HHHHHHH
Q 025128 71 LWFFSGV 77 (257)
Q Consensus 71 ~~~~~G~ 77 (257)
+||++|+
T Consensus 83 lGf~AG~ 89 (116)
T COG5336 83 LGFGAGV 89 (116)
T ss_pred HHHHHHH
Confidence 3444443
No 28
>PRK00733 hppA membrane-bound proton-translocating pyrophosphatase; Validated
Probab=33.96 E-value=5e+02 Score=26.11 Aligned_cols=22 Identities=41% Similarity=0.628 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 025128 5 VLVALGLSLVGGLSTSIGALFV 26 (257)
Q Consensus 5 ~~~~~~~~~~~~~~~~lG~~~~ 26 (257)
....++...+.-+++.+|.+..
T Consensus 236 v~~Pl~i~~~gii~Siig~~~v 257 (666)
T PRK00733 236 VLFPLLIAAVGIIASIIGIFFV 257 (666)
T ss_pred HHHHHHHHHHHHHHHHHHHeeE
Confidence 3444555555556666665544
No 29
>TIGR00753 undec_PP_bacA undecaprenyl-diphosphatase UppP. This is a family of small, highly hydrophobic proteins. Overexpression of this protein in Escherichia coli is associated with bacitracin resistance, and the protein was originally proposed to be an undecaprenol kinase and called bacA. It is now known to be an undecaprenyl pyrophosphate phosphatase (EC 3.6.1.27) and is renamed UppP.
Probab=33.62 E-value=3.3e+02 Score=23.83 Aligned_cols=23 Identities=13% Similarity=0.088 Sum_probs=21.0
Q ss_pred hcCCHHHHHHHHHHHhhHHHHHH
Q 025128 178 ATQSKWQAFKLATLSGFAEPLGV 200 (257)
Q Consensus 178 ~g~s~~~~~~~~~~~~l~~plG~ 200 (257)
.|.+|..+..++++.++|+.+|+
T Consensus 175 ~G~~r~~Aa~fSFllsiP~i~gA 197 (255)
T TIGR00753 175 IGLNRKAAAEFSFLLAIPIMFGA 197 (255)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHH
Confidence 58999999999999999999884
No 30
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=31.35 E-value=2.4e+02 Score=23.58 Aligned_cols=41 Identities=24% Similarity=0.271 Sum_probs=23.0
Q ss_pred HHHHHHHHHHhhcCchh---HHHHHHHHHHHHHHHHHHHHhhHH
Q 025128 19 TSIGALFVVLNEAPNLK---VLGLLQGFAAGLMLSISFLDLAHN 59 (257)
Q Consensus 19 ~~lG~~~~~~~~~~~~~---~l~~l~afaaGvml~~~~~~llpe 59 (257)
..+|+.+.+..||-.+. ..--+.++..|.++|..+...+|.
T Consensus 123 l~~~~~iyfl~~K~~~~~rA~~~~~~~L~~G~~lGs~l~~~l~~ 166 (194)
T PF11833_consen 123 LGLGACIYFLNRKERKLGRAFLWTLGGLVVGLILGSLLASWLPV 166 (194)
T ss_pred HHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 34455555554443332 333455667788888877666644
No 31
>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein. TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane
Probab=30.56 E-value=3.1e+02 Score=22.59 Aligned_cols=54 Identities=9% Similarity=0.223 Sum_probs=31.3
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHhhcCCHHHHHHHHHHHhhHH-----HHHHHHH---------HHHHHHHHHHHhhhHhh
Q 025128 155 NLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATLSGFAE-----PLGVIIV---------VGGVMAFLTLHEMLPLA 220 (257)
Q Consensus 155 ~l~~ai~lH~ipeg~a~~~~l~~~g~s~~~~~~~~~~~~l~~-----plG~~ig---------aaG~~lyv~~~ellpe~ 220 (257)
.+.++++..++|+. .|+|++.+....++.. ..+..+- .+.-++|.+..++.++.
T Consensus 15 ~~vi~~~~~~lp~~------------~r~kal~~Gi~~A~~lR~~~i~~~~~ll~~~~~i~~igG~~Ll~~a~k~~~~~~ 82 (183)
T PF03741_consen 15 AFVIAMIFRKLPPE------------QRRKALFWGIIGAIVLRIIFIFLASWLLSIFPWILLIGGLFLLYIAIKLLHEER 82 (183)
T ss_pred HHHHHHHHhCCCHH------------HhhhhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 46777777788875 3445555443333322 1121111 56677899999998854
No 32
>PF11190 DUF2976: Protein of unknown function (DUF2976); InterPro: IPR021356 Members of this protein family are found occasionally on plasmids such as the Pseudomonas putida TOL plasmid pWWO_p085. Usually, however, they are found on the bacterial main chromosome in a region flanked by markers of conjugative transfer and/or transposition.
Probab=30.29 E-value=2.1e+02 Score=20.70 Aligned_cols=46 Identities=11% Similarity=0.119 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHhhhH---hhhhccChhHH-HHHHHHHHHHHHHHHHHHHhh
Q 025128 204 VGGVMAFLTLHEMLP---LAFDYAGQKQA-VKAVFVGMAFMSASLYFLEIS 250 (257)
Q Consensus 204 aaG~~lyv~~~ellp---e~~~~~~~~~~-~~~~~~G~~l~~~~l~~~~~~ 250 (257)
++-+|++|+-. .+- |.++.++.+.. -...++|+.++.+..++..-.
T Consensus 35 ~a~afi~Va~~-~i~~y~eir~gK~~W~~fg~~~vVGvvLlv~viwLl~~A 84 (87)
T PF11190_consen 35 AAAAFIVVAKA-AISTYNEIRDGKKTWGDFGATVVVGVVLLVFVIWLLTKA 84 (87)
T ss_pred HHHHHHHHHHH-HHHHHHHHHcCcccHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 56677777664 333 22322111212 256888999988888776543
No 33
>KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism]
Probab=28.62 E-value=5e+02 Score=24.44 Aligned_cols=16 Identities=25% Similarity=0.245 Sum_probs=8.8
Q ss_pred HHHHHHHHHHHHHHHH
Q 025128 8 ALGLSLVGGLSTSIGA 23 (257)
Q Consensus 8 ~~~~~~~~~~~~~lG~ 23 (257)
.++.++++.+-..+|.
T Consensus 160 SlLGSILsnlLLvlG~ 175 (441)
T KOG1397|consen 160 SLLGSILSNLLLVLGL 175 (441)
T ss_pred hhHHHHHHHHHHHhhH
Confidence 3555666665555553
No 34
>TIGR03716 R_switched_YkoY integral membrane protein, YkoY family. Rfam model RF00080 describes a structured RNA element called the yybP-ykoY leader, or SraF, which may precede one or several genes in a genome. Members of this highly hydrophobic protein family often are preceded by a yybP-ykoY leader, which may serve as a riboswitch. From the larger group of TerC homologs (pfam03741), this subfamily contains proteins YceF and YkoY from Bacillus subtilis. A transport function is proposed.
Probab=26.97 E-value=2.6e+02 Score=23.82 Aligned_cols=54 Identities=13% Similarity=0.305 Sum_probs=31.5
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHhhcCCHHHHHHHHHHHhhHH-----HHHHHHH-------H-HHHHHHHHHHhhhHhh
Q 025128 155 NLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATLSGFAE-----PLGVIIV-------V-GGVMAFLTLHEMLPLA 220 (257)
Q Consensus 155 ~l~~ai~lH~ipeg~a~~~~l~~~g~s~~~~~~~~~~~~l~~-----plG~~ig-------a-aG~~lyv~~~ellpe~ 220 (257)
.+.++++..++|+. .|+|+..+....++.. .+|+.+- . +.-++|.+..++.++.
T Consensus 12 ~~via~~~~~LP~~------------~r~~al~~Gi~gAivlR~i~i~~~~~Ll~~~~l~~iGG~~Ll~~~~k~l~~~~ 78 (215)
T TIGR03716 12 ALVLAVMVKHLPEK------------QRKKALFYGLIGAYVFRFIALFLASFLIKFWWIKAIGALYLLYLAIKHFRKKK 78 (215)
T ss_pred HHHHHHHHhhCCHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 46677777788875 3455655554433322 2222222 3 4457899999888754
No 35
>PF10767 DUF2593: Protein of unknown function (DUF2593); InterPro: IPR019703 This entry represents proteins that appear to be restricted to Enterobacteriaceae. Some members are annotated as YbjO, however there is currently no known function.
Probab=26.11 E-value=1.7e+02 Score=23.17 Aligned_cols=21 Identities=24% Similarity=0.082 Sum_probs=8.9
Q ss_pred HHHHHHHHHHHHHHHHhhHHH
Q 025128 40 LQGFAAGLMLSISFLDLAHNA 60 (257)
Q Consensus 40 l~afaaGvml~~~~~~llpea 60 (257)
+.....|.|+.+++-...||-
T Consensus 82 ~Q~~v~~Yml~ASlg~~~Pei 102 (144)
T PF10767_consen 82 CQILVVGYMLMASLGWFYPEI 102 (144)
T ss_pred HHHHHHHHHHHHHhccCCcce
Confidence 333444444444444444443
No 36
>PF02673 BacA: Bacitracin resistance protein BacA; InterPro: IPR003824 This is a family of small, highly hydrophobic proteins. Over-expression of this protein in Escherichia coli is associated with bacitracin resistance [], and the protein was originally proposed to be an undecaprenol kinase called bacA. BacA protein, however, does not show undecaprenol phosphokinase activity []. It is now known to be an undecaprenyl pyrophosphate phosphatase (3.6.1.27 from EC) and is renamed UppP. It is not the only protein associated with bacitracin resistance [, ].; GO: 0050380 undecaprenyl-diphosphatase activity, 0016311 dephosphorylation, 0016020 membrane
Probab=25.80 E-value=4.5e+02 Score=22.96 Aligned_cols=24 Identities=17% Similarity=0.198 Sum_probs=21.5
Q ss_pred hhcCCHHHHHHHHHHHhhHHHHHH
Q 025128 177 FATQSKWQAFKLATLSGFAEPLGV 200 (257)
Q Consensus 177 ~~g~s~~~~~~~~~~~~l~~plG~ 200 (257)
-.|.+|.++..++++.++|..+|+
T Consensus 174 ~~G~~r~~A~~fSFllsiP~ilga 197 (259)
T PF02673_consen 174 LLGLDREEAARFSFLLSIPAILGA 197 (259)
T ss_pred HCCCCHHHHHHHHHHHHHHHHHHH
Confidence 469999999999999999998884
No 37
>PF04306 DUF456: Protein of unknown function (DUF456); InterPro: IPR007403 This is a family of putative membrane proteins.
Probab=24.95 E-value=3.4e+02 Score=21.28 Aligned_cols=81 Identities=25% Similarity=0.222 Sum_probs=49.3
Q ss_pred HHHHHHHHHhhhhhHHHH-HHHhhccchhhHHHHHHHHHHhhhHHHHHHHHHHHhhcCCHHHHHHHH--HHHh--hHHHH
Q 025128 124 GIITAVGISLHNFPEGMA-VFLGSMKGLRVGLNLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLA--TLSG--FAEPL 198 (257)
Q Consensus 124 ~~~l~lal~lHs~~eGla-iG~a~~~~~~~g~~l~~ai~lH~ipeg~a~~~~l~~~g~s~~~~~~~~--~~~~--l~~pl 198 (257)
..+...+..++.+.+|.. ++-.+. ..+.+-.++=+.-|=++-....++.|-||+-.+.-. .+.+ +..|+
T Consensus 9 ~~l~~~g~l~~~~~~g~~~~~~~~l------~~~~~l~~l~~~~d~~~~~~~ak~~G~s~~~~~ga~iG~IvG~f~~~p~ 82 (140)
T PF04306_consen 9 TPLIWLGILLYAFFTGFSEFGWWFL------AILAVLALLGEVLDYLAGAYGAKRFGASRWGIWGAIIGGIVGFFVLPPL 82 (140)
T ss_pred HHHHHHHHHHHHHHcCCCcccHHHH------HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhHH
Confidence 345678888899888776 443321 223333445567777777788889999987765432 1112 23366
Q ss_pred HHHHH-HHHHHHH
Q 025128 199 GVIIV-VGGVMAF 210 (257)
Q Consensus 199 G~~ig-aaG~~ly 210 (257)
|.++| -.|+++.
T Consensus 83 G~iiG~~~Ga~l~ 95 (140)
T PF04306_consen 83 GLIIGPFLGAFLG 95 (140)
T ss_pred HHHHHHHHHHHHH
Confidence 77776 6666543
No 38
>PF03620 IBV_3C: IBV 3C protein; InterPro: IPR005296 These proteins are the product of ORF 3C from Infectious bronchitis virus. Currently, the function of this protein remains unknown.
Probab=24.11 E-value=1.5e+02 Score=21.31 Aligned_cols=33 Identities=15% Similarity=0.333 Sum_probs=25.1
Q ss_pred HhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHc
Q 025128 55 DLAHNAINSIGFLKGNLWFFSGVIFFAIVANFI 87 (257)
Q Consensus 55 ~llpea~~~~~~~~~~~~~~~G~~~~~~le~~~ 87 (257)
.++.+++|..+...+.+.+++|++..+++.+.+
T Consensus 3 n~l~~sleeNG~Flt~lYv~~gfialYllgk~L 35 (93)
T PF03620_consen 3 NLLSKSLEENGSFLTALYVLLGFIALYLLGKAL 35 (93)
T ss_pred cHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 456788888777777888888888888876643
No 39
>COG5548 Small integral membrane protein [Function unknown]
Probab=24.08 E-value=2.3e+02 Score=20.90 Aligned_cols=35 Identities=26% Similarity=0.475 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHH
Q 025128 16 GLSTSIGALFVVLNEAPNLKVLGLLQGFAAGLMLSISF 53 (257)
Q Consensus 16 ~~~~~lG~~~~~~~~~~~~~~l~~l~afaaGvml~~~~ 53 (257)
++-+.+|++++++.|+ ++ .+++.+.+.|..++++-
T Consensus 11 s~L~tiGGliGY~rk~-S~--vSL~sG~~~G~~~~~A~ 45 (105)
T COG5548 11 SMLATIGGLIGYFRKN-SQ--VSLLSGVFSGLLLFVAA 45 (105)
T ss_pred HHHHHhhhHHHHHhcC-Cc--hhhHHHHHHhHHHHHHH
Confidence 3445678899988643 33 35667777788777763
No 40
>PRK12554 undecaprenyl pyrophosphate phosphatase; Reviewed
Probab=24.03 E-value=5.1e+02 Score=22.93 Aligned_cols=25 Identities=12% Similarity=0.114 Sum_probs=20.3
Q ss_pred hcCCHHHHHHHHHHHhhHHHHHHHH
Q 025128 178 ATQSKWQAFKLATLSGFAEPLGVII 202 (257)
Q Consensus 178 ~g~s~~~~~~~~~~~~l~~plG~~i 202 (257)
.|.+|..+..++++.++|+.+|+.+
T Consensus 181 ~G~~r~~Aa~fSFllsiP~i~gA~~ 205 (276)
T PRK12554 181 LGLTREAAARFSFLLAIPAVFGAGL 205 (276)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4889999999999998888887443
No 41
>PF05437 AzlD: Branched-chain amino acid transport protein (AzlD); InterPro: IPR008407 This family consists of a number of bacterial and archaeal branched-chain amino acid transport proteins. AzlD, a member of this group, has been shown by mutational analysis to be involved in branched-chain amino acid transport, and to be involved in conferring resistance to 4-azaleucine []. However, its exact role in these processes is not yet clear []. Based on its hydropathy profile, it has been suggested to be a membrane protein [].
Probab=23.26 E-value=2.9e+02 Score=19.85 Aligned_cols=31 Identities=6% Similarity=0.079 Sum_probs=25.0
Q ss_pred hcCchhHHHHHHHHHHHHHHHHHHHHhh-HHH
Q 025128 30 EAPNLKVLGLLQGFAAGLMLSISFLDLA-HNA 60 (257)
Q Consensus 30 ~~~~~~~l~~l~afaaGvml~~~~~~ll-pea 60 (257)
++.+++....+.....+++-+..+-+++ |+.
T Consensus 26 ~~~~~~~~~~l~~vp~avl~aLv~~~i~~~~~ 57 (99)
T PF05437_consen 26 RKLPPRVRRFLRYVPPAVLAALVVPSIFFPTG 57 (99)
T ss_pred ccCCHHHHHHHHHhHHHHHHHHHHHHHccCcc
Confidence 4567888888888999999999988888 443
No 42
>PF11204 DUF2985: Protein of unknown function (DUF2985); InterPro: IPR021369 This eukaryotic family of proteins has no known function.
Probab=22.85 E-value=87 Score=22.43 Aligned_cols=32 Identities=31% Similarity=0.458 Sum_probs=23.5
Q ss_pred HHHHHHHH-------HHHHHHHHHHHhhhHhhhhccChh
Q 025128 196 EPLGVIIV-------VGGVMAFLTLHEMLPLAFDYAGQK 227 (257)
Q Consensus 196 ~plG~~ig-------aaG~~lyv~~~ellpe~~~~~~~~ 227 (257)
+|.|.++. +.|++++......+|.+.+.+++|
T Consensus 6 tP~g~~i~iy~~~V~~~Ga~lfllL~g~~~~~~~~~s~r 44 (81)
T PF11204_consen 6 TPMGFAITIYGLNVVAWGAMLFLLLCGMLNAMCHNKSPR 44 (81)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHccchhccCCCccc
Confidence 56665554 889999999999999876554443
No 43
>PRK00281 undecaprenyl pyrophosphate phosphatase; Reviewed
Probab=21.38 E-value=5.7e+02 Score=22.50 Aligned_cols=24 Identities=21% Similarity=0.126 Sum_probs=20.6
Q ss_pred hcCCHHHHHHHHHHHhhHHHHHHH
Q 025128 178 ATQSKWQAFKLATLSGFAEPLGVI 201 (257)
Q Consensus 178 ~g~s~~~~~~~~~~~~l~~plG~~ 201 (257)
.|.+|..+..++++.++|+.+|+.
T Consensus 179 ~G~~r~~Aa~fSFLlsiPai~gA~ 202 (268)
T PRK00281 179 LGLSREAAAEFSFLLAIPAMLGAS 202 (268)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHH
Confidence 589999999999999998888844
No 44
>TIGR03753 blh_monoox beta-carotene 15,15'-monooxygenase, Brp/Blh family. This integral membrane protein family includes Brp (bacterio-opsin related protein) and Blh (Brp-like protein). Bacteriorhodopsin is a light-driven proton pump with a covalently bound retinal cofactor that appears to be derived beta-carotene. Blh has been shown to cleave beta-carotene to product two all-trans retinal molecules. Mammalian enzymes with similar enzymatic function are not multiple membrane spanning proteins and are not homologous.
Probab=20.76 E-value=5.7e+02 Score=22.26 Aligned_cols=91 Identities=16% Similarity=0.050 Sum_probs=44.9
Q ss_pred HHHHHHHhhhHHHHHHHHHHHhhc--CCHHHHHHHHHHH-hhHHH-HHHHHH----HHHHHHHHHHHhhhHhhhh---cc
Q 025128 156 LAVAIALHNIPEGVAVALPVYFAT--QSKWQAFKLATLS-GFAEP-LGVIIV----VGGVMAFLTLHEMLPLAFD---YA 224 (257)
Q Consensus 156 l~~ai~lH~ipeg~a~~~~l~~~g--~s~~~~~~~~~~~-~l~~p-lG~~ig----aaG~~lyv~~~ellpe~~~---~~ 224 (257)
..+++..=++|+|-.|.....+.+ .++++...+...+ ++... +..+.- +-..|+-++.-+.=-+..+ +.
T Consensus 3 ~l~~i~~iGlPHGA~D~~i~~~~~~~~~~~~~~~f~~~Yl~l~~~~~~~w~~~P~~aL~lFl~iS~~HFG~~D~~~~~~~ 82 (259)
T TIGR03753 3 ALLAVLLLGLPHGALDHLIAARLGGRRSIRFFAKFLLLYLLLAGLVLALWLVAPVAALLLFLAISAYHFGEGDLYFLIKT 82 (259)
T ss_pred HHHHHHHHCCCcchhhHHHHHhhcccCChhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHcChhhhhhhccC
Confidence 456777788999999998888775 2333333222222 11111 111111 4444554444433222222 22
Q ss_pred ChhHHHHHHHHHHHHHHHHHHH
Q 025128 225 GQKQAVKAVFVGMAFMSASLYF 246 (257)
Q Consensus 225 ~~~~~~~~~~~G~~l~~~~l~~ 246 (257)
+.++....+.-|...|.+..++
T Consensus 83 ~~~~~l~~~~~Gg~vi~~P~lf 104 (259)
T TIGR03753 83 RPGRALLILVRGGLVILLPLLF 104 (259)
T ss_pred chhhHHHHHHhchHHHHHHHHh
Confidence 2233444456677777766554
No 45
>COG2035 Predicted membrane protein [Function unknown]
Probab=20.74 E-value=6e+02 Score=22.57 Aligned_cols=56 Identities=13% Similarity=0.097 Sum_probs=36.5
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHh---hhhHHHHHHHHHHHHHHHHHHHHc
Q 025128 31 APNLKVLGLLQGFAAGLMLSISFLDLAHNAINS---IGFLKGNLWFFSGVIFFAIVANFI 87 (257)
Q Consensus 31 ~~~~~~l~~l~afaaGvml~~~~~~llpea~~~---~~~~~~~~~~~~G~~~~~~le~~~ 87 (257)
..-++....-+.|-.|.|++.. ..++|..-+. ..+......+..|+.+.+..++..
T Consensus 213 y~L~~h~~~t~~fi~Gl~lgSl-~~i~p~~~~~~~~~~~~~~~~~f~lG~al~~~~~~~~ 271 (276)
T COG2035 213 YLLRNHREITYAFIIGLILGSL-RAIWPGLAAAINFFSLFMLVVAFILGFALVLILKKLA 271 (276)
T ss_pred HHHHHhHHHHHHHHHHHHHHHH-HHHhcCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445666777888889888874 6777732222 234456667788877777766543
No 46
>PF03030 H_PPase: Inorganic H+ pyrophosphatase; InterPro: IPR004131 Two types of proteins that hydrolyse inorganic pyrophosphate (PPi), very different in both amino acid sequence and structure, have been characterised to date: soluble and membrane-bound proton-pumping pyrophosphatases (sPPases and H(+)-PPases, respectively). sPPases are ubiquitous proteins that hydrolyse PPi to release heat, whereas H+-PPases, so far unidentified in animal and fungal cells, couple the energy of PPi hydrolysis to proton movement across biological membranes [, ]. The latter type is represented by this group of proteins. H+-PPases (3.6.1.1 from EC) are also called vacuolar-type inorganic pyrophosphatases (V-PPase) or pyrophosphate-energised vacuolar membrane proton pumps []. In plants, vacuoles contain two enzymes for acidifying the interior of the vacuole, the V-ATPase and the V-PPase (V is for vacuolar) []. Two distinct biochemical subclasses of H+-PPases have been characterised to date: K+-stimulated and K+-insensitive [, ]. For additional information please see [, ].; GO: 0004427 inorganic diphosphatase activity, 0009678 hydrogen-translocating pyrophosphatase activity, 0015992 proton transport, 0016020 membrane; PDB: 4A01_A.
Probab=20.43 E-value=9e+02 Score=24.49 Aligned_cols=27 Identities=33% Similarity=0.502 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 025128 5 VLVALGLSLVGGLSTSIGALFVVLNEA 31 (257)
Q Consensus 5 ~~~~~~~~~~~~~~~~lG~~~~~~~~~ 31 (257)
..++++.+.+.-+++.+|.+.....++
T Consensus 256 v~~Pl~i~~~gii~Siig~~~v~~~~~ 282 (682)
T PF03030_consen 256 VLFPLLIAAVGIIASIIGIFFVRTKKG 282 (682)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHTT--
T ss_pred HHHHHHHHHHHHHHHHHheeEEEecCC
Confidence 345566666666777777766655443
Done!