BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 025129
         (257 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q1RI31|Y902_RICBR Putative ankyrin repeat protein RBE_0902 OS=Rickettsia bellii
           (strain RML369-C) GN=RBE_0902 PE=4 SV=1
          Length = 559

 Score = 31.6 bits (70), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 15/81 (18%)

Query: 172 FGFITST-VTLQKDNGDEELCSVFVP-TNHLYIGDIF-LVSSKEIIRPNLSIREGIEIIV 228
           FGF   T VTL   NGD+++C + +P T+   I DI  L   K+ I         IE I 
Sbjct: 372 FGFTAFTWVTL---NGDKKICELLIPKTSPEVIIDILKLTKEKQFI---------IEAIN 419

Query: 229 SGGMTMPQVISPIERVARQGE 249
           S   T P+VI  I ++A++ +
Sbjct: 420 SCNKTSPEVIINILKLAKEKQ 440


>sp|C1N652|CSPL_MICPC CASP-like protein MICPUCDRAFT_53157 OS=Micromonas pusilla (strain
           CCMP1545) GN=MICPUCDRAFT_53157 PE=3 SV=2
          Length = 205

 Score = 30.8 bits (68), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)

Query: 93  FGLGFITSLVFVFLVGVFVSSWLGSTVFWVGEWFIKRMP 131
           +G G+    VF FLV + V+ WL  T+ W+G + I+++P
Sbjct: 54  YGCGYHKFAVFQFLVVICVTYWL-FTMLWMGMYLIQKVP 91


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.324    0.139    0.429 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,512,709
Number of Sequences: 539616
Number of extensions: 3866732
Number of successful extensions: 13695
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 13688
Number of HSP's gapped (non-prelim): 27
length of query: 257
length of database: 191,569,459
effective HSP length: 115
effective length of query: 142
effective length of database: 129,513,619
effective search space: 18390933898
effective search space used: 18390933898
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 60 (27.7 bits)