BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025134
(257 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7Y175|UBAX1_ARATH UBA and UBX domain-containing protein At4g15410 OS=Arabidopsis
thaliana GN=At4g15410 PE=2 SV=1
Length = 421
Score = 268 bits (686), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 153/262 (58%), Positives = 188/262 (71%), Gaps = 13/262 (4%)
Query: 3 CGMLVQDPSKGDPNDVDAIFNQAKELGAVEGPLEHLSPS-SSSRSFTGTARLLSGETVPS 61
GM+VQDP K DVD +F+QA++ AV+ P+E PS S+S SFTG ARLLSGE V S
Sbjct: 166 SGMMVQDPKK--VKDVDELFDQARQ-SAVDRPVE---PSRSASTSFTGAARLLSGEAVSS 219
Query: 62 APQQPEP-----IVHNIVFWANGFTVNDGPLRRLDDPENASFLESIKKSECPKELEPADK 116
+PQQ + I+H I FW NGFTVNDGPLR DPENA+F+ SI +SECP ELEPADK
Sbjct: 220 SPQQQQQEQPQRIMHTITFWLNGFTVNDGPLRGFSDPENAAFMNSISRSECPSELEPADK 279
Query: 117 RSSVHVNLIRRDVKCPEPEKHHVPFQGVGRTLGSSSTAASEPTVDSTP-VNTASSSSEGL 175
+ VHV+L+RR EP K PFQGVGRTLG+S + +S S+ +N A + S GL
Sbjct: 280 KIPVHVDLVRRGENFTEPPKPKNPFQGVGRTLGASGSGSSSAPQASSAPMNVAPAPSRGL 339
Query: 176 VVDENLPSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDASRPGTARNYQLQMMGFPPKV 235
VVD P+TS+Q+RLADGTRL++ FN HHT+ D+ FIDASRPG ++ YQL MGFPPK
Sbjct: 340 VVDPAAPTTSIQLRLADGTRLVSRFNNHHTVRDVRGFIDASRPGGSKEYQLLTMGFPPKQ 399
Query: 236 LADRTQTIEQAGLANSVVIQKF 257
L + QTIEQAG+AN+VVIQKF
Sbjct: 400 LTELDQTIEQAGIANAVVIQKF 421
>sp|Q5RBG3|NSF1C_PONAB NSFL1 cofactor p47 OS=Pongo abelii GN=NSFL1C PE=2 SV=1
Length = 370
Score = 145 bits (365), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/264 (35%), Positives = 138/264 (52%), Gaps = 12/264 (4%)
Query: 6 LVQDPSKGDPND-VDAIFNQAKELGAVEGPLEHLSPSSSS--RSFTGTARLL-------S 55
+V P K PN+ VD +F AKE GAV SP +S R F G L S
Sbjct: 106 IVGPPRKKSPNELVDDLFKGAKEHGAVAVERVTKSPGETSKPRPFAGGGYRLGAAPEEES 165
Query: 56 GETVPSAPQQPEPIVHNIV-FWANGFTVNDGPLRRLDDPENASFLESIKKSECPKELEPA 114
Q VH ++ W +GF++++G LR DP NA FLESI++ E P EL
Sbjct: 166 AYVAGEKRQHSSQDVHVVLKLWKSGFSLDNGELRSYQDPSNAQFLESIRRGEVPAELRRL 225
Query: 115 DKRSSVHVNL-IRRDVKCPEPEKHHVPFQGVGRTLGSSSTAASEPTVDSTPVNTASSSSE 173
V++++ RD +P+ F G G+ LGS++ + + + +S
Sbjct: 226 AHGGQVNLDMEDHRDEDFVKPKGAFKAFTGEGQKLGSTAPQVLSTSSPAQQAENEAKASS 285
Query: 174 GLVVDENLPSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDASRPGTARNYQLQMMGFPP 233
+++DE+ P+T++QIRLADG RL+ FN H ISDI FI +RP A + M FP
Sbjct: 286 SILIDESEPTTNIQIRLADGGRLVQKFNHSHRISDIRLFIVDARPAMAATSFILMTTFPN 345
Query: 234 KVLADRTQTIEQAGLANSVVIQKF 257
K LAD +QT+++A L N+V++Q+
Sbjct: 346 KELADESQTLKEANLLNAVIVQRL 369
>sp|Q9UNZ2|NSF1C_HUMAN NSFL1 cofactor p47 OS=Homo sapiens GN=NSFL1C PE=1 SV=2
Length = 370
Score = 145 bits (365), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/264 (35%), Positives = 138/264 (52%), Gaps = 12/264 (4%)
Query: 6 LVQDPSKGDPND-VDAIFNQAKELGAVEGPLEHLSPSSSS--RSFTGTARLL-------S 55
+V P K PN+ VD +F AKE GAV SP +S R F G L S
Sbjct: 106 IVGPPRKKSPNELVDDLFKGAKEHGAVAVERVTKSPGETSKPRPFAGGGYRLGAAPEEES 165
Query: 56 GETVPSAPQQPEPIVHNIV-FWANGFTVNDGPLRRLDDPENASFLESIKKSECPKELEPA 114
Q VH ++ W +GF++++G LR DP NA FLESI++ E P EL
Sbjct: 166 AYVAGEKRQHSSQDVHVVLKLWKSGFSLDNGELRSYQDPSNAQFLESIRRGEVPAELRRL 225
Query: 115 DKRSSVHVNL-IRRDVKCPEPEKHHVPFQGVGRTLGSSSTAASEPTVDSTPVNTASSSSE 173
V++++ RD +P+ F G G+ LGS++ + + + +S
Sbjct: 226 AHGGQVNLDMEDHRDEDFVKPKGAFKAFTGEGQKLGSTAPQVLSTSSPAQQAENEAKASS 285
Query: 174 GLVVDENLPSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDASRPGTARNYQLQMMGFPP 233
+++DE+ P+T++QIRLADG RL+ FN H ISDI FI +RP A + M FP
Sbjct: 286 SILIDESEPTTNIQIRLADGGRLVQKFNHSHRISDIRLFIVDARPAMAATSFILMTTFPN 345
Query: 234 KVLADRTQTIEQAGLANSVVIQKF 257
K LAD +QT+++A L N+V++Q+
Sbjct: 346 KELADESQTLKEANLLNAVIVQRL 369
>sp|Q3SZC4|NSF1C_BOVIN NSFL1 cofactor p47 OS=Bos taurus GN=NSFL1C PE=2 SV=1
Length = 370
Score = 142 bits (357), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/269 (34%), Positives = 137/269 (50%), Gaps = 22/269 (8%)
Query: 6 LVQDPSKGDPND-VDAIFNQAKELGAVEGPLEHLSPSSSS--RSFTGTARLLSGETVPSA 62
+V P K PN+ VD +F AKE GAV SP +S R F G G + +A
Sbjct: 106 IVGPPRKRSPNELVDDLFKGAKEHGAVAVERVTKSPGETSKPRPFAG-----GGYRLGAA 160
Query: 63 PQQPEPIVHN-------------IVFWANGFTVNDGPLRRLDDPENASFLESIKKSECPK 109
P++ V + W GF++++G LR DP NA FLESI++ E P
Sbjct: 161 PEEESAYVAGERRRHSGQDVHVVLKLWKTGFSLDNGELRSYQDPSNAQFLESIRRGEVPA 220
Query: 110 ELEPADKRSSVHVNL-IRRDVKCPEPEKHHVPFQGVGRTLGSSSTAASEPTVDSTPVNTA 168
EL V++++ RD +P+ F G G+ LGS++ + +
Sbjct: 221 ELRRLAHGGQVNLDMEDHRDEDFVKPKGAFKAFTGEGQKLGSTAPQILNTSSPAQQAENE 280
Query: 169 SSSSEGLVVDENLPSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDASRPGTARNYQLQM 228
+ +S + +DE+ P+T++QIRLADG RL+ FN H ISDI FI +RP A + M
Sbjct: 281 AKASSSISIDESQPTTNIQIRLADGGRLVQKFNHSHRISDIRLFIVDARPAMAATSFVLM 340
Query: 229 MGFPPKVLADRTQTIEQAGLANSVVIQKF 257
FP K LAD QT+++A L N+V++Q+
Sbjct: 341 TTFPNKELADENQTLKEANLLNAVIVQRL 369
>sp|O35987|NSF1C_RAT NSFL1 cofactor p47 OS=Rattus norvegicus GN=Nsfl1c PE=1 SV=1
Length = 370
Score = 140 bits (354), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 137/269 (50%), Gaps = 22/269 (8%)
Query: 6 LVQDPSKGDPND-VDAIFNQAKELGAVEGPLEHLSPSSSS--RSFTGTARLLSGETVPSA 62
+V P K PN+ VD +F AKE GAV SP +S R F G G + +A
Sbjct: 106 IVGPPRKKSPNELVDDLFKGAKEHGAVAVERVTKSPGETSKPRPFAG-----GGYRLGAA 160
Query: 63 PQQPEPIVHN-------------IVFWANGFTVNDGPLRRLDDPENASFLESIKKSECPK 109
P++ V + W GF++++G LR DP NA FLESI++ E P
Sbjct: 161 PEEESAYVAGERRRHSGQDVHVVLKLWKTGFSLDNGDLRSYQDPSNAQFLESIRRGEVPA 220
Query: 110 ELEPADKRSSVHVNL-IRRDVKCPEPEKHHVPFQGVGRTLGSSSTAASEPTVDSTPVNTA 168
EL V++++ RD +P+ F G G+ LGS++ + +
Sbjct: 221 ELRRLAHGGQVNLDMEDHRDEDFVKPKGAFKAFTGEGQKLGSTAPQVLNTSSPAQQAENE 280
Query: 169 SSSSEGLVVDENLPSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDASRPGTARNYQLQM 228
+ +S ++++E P+T++QIRLADG RL+ FN H ISDI FI +RP A + M
Sbjct: 281 AKASSSILINEAEPTTNIQIRLADGGRLVQKFNHSHRISDIRLFIVDARPAMAATSFVLM 340
Query: 229 MGFPPKVLADRTQTIEQAGLANSVVIQKF 257
FP K LAD QT+++A L N+V++Q+
Sbjct: 341 TTFPNKELADENQTLKEANLLNAVIVQRL 369
>sp|Q9CZ44|NSF1C_MOUSE NSFL1 cofactor p47 OS=Mus musculus GN=Nsfl1c PE=1 SV=1
Length = 370
Score = 140 bits (353), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 137/269 (50%), Gaps = 22/269 (8%)
Query: 6 LVQDPSKGDPND-VDAIFNQAKELGAVEGPLEHLSPSSSS--RSFTGTARLLSGETVPSA 62
+V P K PN+ VD +F AKE GAV SP +S R F G G + +A
Sbjct: 106 IVGPPRKKSPNELVDDLFKGAKEHGAVAVERVTKSPGETSKPRPFAG-----GGYRLGAA 160
Query: 63 PQQPEPIVHN-------------IVFWANGFTVNDGPLRRLDDPENASFLESIKKSECPK 109
P++ V + W GF++++G LR DP NA FLESI++ E P
Sbjct: 161 PEEESAYVAGERRRHSGQDVHVVLKLWKTGFSLDNGDLRSYQDPSNAQFLESIRRGEVPA 220
Query: 110 ELEPADKRSSVHVNL-IRRDVKCPEPEKHHVPFQGVGRTLGSSSTAASEPTVDSTPVNTA 168
EL V++++ RD +P+ F G G+ LGS++ + +
Sbjct: 221 ELRRLAHGGQVNLDMEDHRDEDFVKPKGAFKAFTGEGQKLGSTAPQVLNTSSPAQQAENE 280
Query: 169 SSSSEGLVVDENLPSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDASRPGTARNYQLQM 228
+ +S ++++E P+T++QIRLADG RL+ FN H ISDI FI +RP A + M
Sbjct: 281 AKASSSILINEAEPTTNIQIRLADGGRLVQKFNHSHRISDIRLFIVDARPAMAATSFVLM 340
Query: 229 MGFPPKVLADRTQTIEQAGLANSVVIQKF 257
FP K LAD QT+++A L N+V++Q+
Sbjct: 341 TTFPNKELADENQTLKEANLLNAVIVQRL 369
>sp|Q0P3R5|UBX2B_XENLA UBX domain-containing protein 2B OS=Xenopus laevis GN=ubxn2b PE=2
SV=1
Length = 350
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/257 (35%), Positives = 136/257 (52%), Gaps = 24/257 (9%)
Query: 18 VDAIFNQAKELGAVEGPLEHLSPSSSS----RSFTGTARLLSGETVPSAP--------QQ 65
V+ +F +AKE GA+ P++ S SS + R+FTG L + +Q
Sbjct: 100 VNELFKEAKEHGAI--PIDDTSKSSGAFYRARTFTGRGYKLGDSSKREFEYMQGEDPFEQ 157
Query: 66 PEPIVHNIVFWANGFTVNDGPLRRLDDPENASFLESIKKSECPKELEPADKRSSVHVNL- 124
+ I + W+NGF+++DG LR DP NA FLES+KK E P EL+ V++++
Sbjct: 158 GQEIQILLKLWSNGFSLDDGELRSYSDPINAEFLESVKKGEIPVELQRLVHGGQVNLDME 217
Query: 125 IRRDVKCPEPEKHHVPFQGVGRTLGSSSTAASEPTVDSTPVNTASSSSEGLV----VDEN 180
+D + +P F G G+ LGS + P + STP + L +DE+
Sbjct: 218 DHQDQEYIKPRLKFKAFSGEGKKLGSVT-----PEIISTPSSPEEEHKRFLNAEVDLDEH 272
Query: 181 LPSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDASRPGTARNYQLQMMGFPPKVLADRT 240
+P+T +QIRLADGTRLI FNL H I D+ FI +R A+ + FP L D T
Sbjct: 273 VPTTKIQIRLADGTRLIQRFNLSHRIMDVRQFIIHARSDFAQCDFALLTTFPNVELTDET 332
Query: 241 QTIEQAGLANSVVIQKF 257
QT+E+A + N+V++Q+
Sbjct: 333 QTLEEADILNTVILQRL 349
>sp|P0C627|UBX2B_RAT UBX domain-containing protein 2B OS=Rattus norvegicus GN=Ubxn2b
PE=1 SV=1
Length = 331
Score = 135 bits (339), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/270 (34%), Positives = 143/270 (52%), Gaps = 24/270 (8%)
Query: 2 FCGMLVQDPSKGDPNDVDAIFNQAKELGAVEGPLEHLSPSSS---SRSFTGTARLLSGET 58
+ G+ + P G V+ +F +A+E GAV PL + SSS ++SFTG L
Sbjct: 71 YGGLHIAQPPTG--KIVNELFKEAREHGAV--PLNEATRSSSDDKAKSFTGGGYRLGSSF 126
Query: 59 VPSAP-----QQPEPIVHNIVFWANGFTVNDGPLRRLDDPENASFLESIKKSECPKELEP 113
+ Q + + + W+NGF+++DG LR DP NA FLES+K+ E P EL+
Sbjct: 127 YKRSEYIYGENQLQDVQILLRLWSNGFSLDDGELRPYSDPTNAQFLESVKRGEIPLELQR 186
Query: 114 ADKRSSVHVNL-IRRDVKCPEPEKHHVPFQGVGRTLGS-----SSTAASEPTVDSTPVNT 167
S V +++ +D + +P F G G+ LGS ST +S D + +N
Sbjct: 187 LVHGSQVSLDMEDHQDQEYIKPRLRFKAFSGEGQKLGSLTPEIVSTPSSPEEEDKSILNA 246
Query: 168 ASSSSEGLVVDENLPSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDASRPGTARNYQLQ 227
A +++D+++P+T +QIRLADG+RLI FN H I D+ FI SRP A +
Sbjct: 247 A------VLIDDSVPTTKIQIRLADGSRLIQRFNSTHRILDVRDFIVQSRPEFATTDFIL 300
Query: 228 MMGFPPKVLADRTQTIEQAGLANSVVIQKF 257
+ FP K L D + T++ A + N+V++Q+
Sbjct: 301 VTSFPSKELTDESVTLQDADILNTVILQQL 330
>sp|Q5ZK10|NSF1C_CHICK NSFL1 cofactor p47 OS=Gallus gallus GN=NSFL1C PE=2 SV=1
Length = 369
Score = 134 bits (336), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 136/269 (50%), Gaps = 22/269 (8%)
Query: 6 LVQDPSKGDPND-VDAIFNQAKELGAV--EGPLEHLSPSSSSRSFTGTARLLSGETVPSA 62
+V P K PN+ V+ +F AKE GAV + + SS + F G G + +
Sbjct: 105 IVGPPRKKSPNELVEDLFKGAKEHGAVAVDRTAKSSGESSKPKPFAG-----GGYRLGAT 159
Query: 63 PQQPEPIV-----HNIV--------FWANGFTVNDGPLRRLDDPENASFLESIKKSECPK 109
P++ V HN V W GF+++ G LR DP NA FL+ I++ E P
Sbjct: 160 PEEESAYVAGERRHNSVQDVHVVLKLWKTGFSLDSGELRSYQDPSNAQFLDDIRRGEVPA 219
Query: 110 ELEPADKRSSVHVNLI-RRDVKCPEPEKHHVPFQGVGRTLGSSSTAASEPTVDSTPVNTA 168
EL + V++++ RD + +P+ F G G+ LGS++ + +
Sbjct: 220 ELRRLARGGQVNLDMEDHRDEEYVKPKSVFKAFTGEGQKLGSTAPQVLSTSSPAQQAENE 279
Query: 169 SSSSEGLVVDENLPSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDASRPGTARNYQLQM 228
+ +S + +DE+ P T++QIRLADG RL+ FN +H I DI FI +RP A + M
Sbjct: 280 AKASSAIAIDESEPVTNIQIRLADGGRLVQKFNHNHRIRDIRLFIVDARPAMAATSFVLM 339
Query: 229 MGFPPKVLADRTQTIEQAGLANSVVIQKF 257
FP K L D QT+++A L N+V++Q+
Sbjct: 340 TTFPNKELTDENQTLKEANLLNAVIVQRL 368
>sp|Q0KL01|UBX2B_MOUSE UBX domain-containing protein 2B OS=Mus musculus GN=Ubxn2b PE=1
SV=2
Length = 331
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 143/270 (52%), Gaps = 24/270 (8%)
Query: 2 FCGMLVQDPSKGDPNDVDAIFNQAKELGAVEGPLEHLSPSS---SSRSFTGTARLLSGET 58
+ G+ + P G V+ +F +A+E GAV PL + SS ++SFTG L
Sbjct: 71 YDGLHIVQPPTG--KIVNELFKEAREHGAV--PLNEATRSSREDKTKSFTGGGYRLGNSF 126
Query: 59 VPSAP-----QQPEPIVHNIVFWANGFTVNDGPLRRLDDPENASFLESIKKSECPKELEP 113
+ Q + + + W NGF+++DG LR DP NA FLES+K+ E P EL+
Sbjct: 127 YKRSEYIYGENQLQDVQVLLKLWRNGFSLDDGELRPYSDPTNAQFLESVKRGETPLELQR 186
Query: 114 ADKRSSVHVNL-IRRDVKCPEPEKHHVPFQGVGRTLGS-----SSTAASEPTVDSTPVNT 167
+ V++++ +D + +P F G G+ LGS ST +S D + +N
Sbjct: 187 LVHGAQVNLDMEDHQDQEYIKPRLRFKAFSGEGQKLGSLTPEIVSTPSSPEEEDKSILNA 246
Query: 168 ASSSSEGLVVDENLPSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDASRPGTARNYQLQ 227
A +++D+++P+T +QIRLADG+RL+ FN H I D+ FI SRP A +
Sbjct: 247 A------VLIDDSMPTTKIQIRLADGSRLVQRFNSTHRILDVRDFIVRSRPEFATTDFIL 300
Query: 228 MMGFPPKVLADRTQTIEQAGLANSVVIQKF 257
+ FP K L D T T+++A + N+V++Q+
Sbjct: 301 VTSFPSKELTDETVTLQEADILNTVILQQL 330
>sp|Q14CS0|UBX2B_HUMAN UBX domain-containing protein 2B OS=Homo sapiens GN=UBXN2B PE=1
SV=1
Length = 331
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 143/269 (53%), Gaps = 22/269 (8%)
Query: 2 FCGMLVQDPSKGDPNDVDAIFNQAKELGAVEGPLEHLSPSS---SSRSFTGTARLLSGET 58
+ G+ + PS G V+ +F +A+E GAV PL + +S S+SFTG L
Sbjct: 71 YSGLNIVRPSTG--KIVNELFKEAREHGAV--PLNEATRASGDDKSKSFTGGGYRLGSSF 126
Query: 59 VPSAP-----QQPEPIVHNIVFWANGFTVNDGPLRRLDDPENASFLESIKKSECPKELEP 113
+ Q + + + W+NGF+++DG LR ++P NA FLES+K+ E P EL+
Sbjct: 127 CKRSEYIYGENQLQDVQILLKLWSNGFSLDDGELRPYNEPTNAQFLESVKRGEIPLELQR 186
Query: 114 ADKRSSVHVNLI-RRDVKCPEPEKHHVPFQGVGRTLGSSSTAASEPTVDSTPVNTASSSS 172
V++++ +D + +P F G G+ LGS + P + STP +
Sbjct: 187 LVHGGQVNLDMEDHQDQEYIKPRLRFKAFSGEGQKLGSLT-----PEIVSTPSSPEEEDK 241
Query: 173 EGL----VVDENLPSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDASRPGTARNYQLQM 228
L ++D+++P+T +QIRLADG+RLI FN H I D+ +FI SRP A + +
Sbjct: 242 SILNAVVLIDDSVPTTKIQIRLADGSRLIQRFNSTHRILDVRNFIVQSRPEFAALDFILV 301
Query: 229 MGFPPKVLADRTQTIEQAGLANSVVIQKF 257
FP K L D + T+ +A + N+V++Q+
Sbjct: 302 TSFPNKELTDESLTLLEADILNTVLLQQL 330
>sp|Q5ZLK2|UBX2B_CHICK UBX domain-containing protein 2B OS=Gallus gallus GN=UBXN2B PE=2
SV=1
Length = 365
Score = 128 bits (321), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 141/278 (50%), Gaps = 39/278 (14%)
Query: 2 FCGMLVQDPSKGDPNDVDAIFNQAKELGAVEGPLEHLSPSS----SSRSFTGTARLLSGE 57
+ G+ + S V +F +AKE GAV PL+ S +S ++SF+G G
Sbjct: 104 YRGLQIWGASNNPSKIVAELFKEAKEHGAV--PLDEASRTSGDFSKAKSFSG-----GGY 156
Query: 58 TVPSAPQQPEPIVHN--------IVFWANGFTVNDGPLRRLDDPENASFLESIKKSECPK 109
+ + Q+ ++ + W NGF+++DG LR DP NA FLES+K+ E P
Sbjct: 157 RLGDSSQKHSEYIYGENQDVQILLKLWRNGFSLDDGELRSYSDPINAQFLESVKRGEIPV 216
Query: 110 ELEPADKRSSVHVNLIRRDVKCPEPEKHHVP------FQGVGRTLGSSSTAASEPTVDST 163
+L+ VH + D++ + +++ P F G G+ LGS + P + ST
Sbjct: 217 DLQRL-----VHGGQVNLDMEDHQEQEYVKPRLRFKAFSGEGQKLGSLT-----PEIVST 266
Query: 164 PVNTASSSSEGL----VVDENLPSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDASRPG 219
P + L ++D+++P+T +QIRLADG+RLI FN H I DI FI SRP
Sbjct: 267 PSSPEEEDKSILNAPVLIDDSVPATKIQIRLADGSRLIQRFNQTHRIKDIRDFIIQSRPA 326
Query: 220 TARNYQLQMMGFPPKVLADRTQTIEQAGLANSVVIQKF 257
A + + FP K L D + T+ +A + N+V++Q+
Sbjct: 327 FATTDFVLVTTFPNKELTDESLTLREADILNTVILQQL 364
>sp|P0C8Q0|UBX1_EMENI UBX domain-containing protein 1 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=ubx1
PE=3 SV=1
Length = 373
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 110/224 (49%), Gaps = 13/224 (5%)
Query: 47 FTGTARLLSGETVPS----------APQQPEPIVHNIVFWANGFTVNDGPLRRLDDPENA 96
FTG AR L GE PS PQ P + + FWA+GF+V+DG L R DDP+NA
Sbjct: 149 FTGPARTLGGEDTPSRVIDTPSGPAQPQIPRRVRRTLHFWADGFSVDDGELYRSDDPQNA 208
Query: 97 SFLESIKKSECPKELEPADKRSSVHVNLIRRDVKCPEPEKHHVPFQGVGRTLGSSSTAAS 156
L SI++ P + A V V + + D K P+ + PF G G+ LGS +
Sbjct: 209 EILNSIRQGRAPLSIMNAQHGQDVDVEIKQHDEKYVRPKPKYQPFAGKGQRLGSPTPGIR 268
Query: 157 EPTVDSTPVNTASSSS-EGLVVDENLPSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDA 215
P SSS VDE+ P ++QIRL DGTRL + FN HTI D++ F+ A
Sbjct: 269 APAPSEPAPAPQSSSGPPKPNVDESQPVVTLQIRLGDGTRLTSRFNTTHTIGDVYDFVSA 328
Query: 216 SRPGTARNYQLQMMGFPPKVLADRTQTIEQ--AGLANSVVIQKF 257
+ P + + + FP K L D+ + VV+QK+
Sbjct: 329 ASPQSQARPWVLLTTFPSKELTDKAAVLGDLPEFKRGGVVVQKW 372
>sp|Q54BQ5|NSF1C_DICDI NSFL1 cofactor p47 homolog OS=Dictyostelium discoideum GN=nsfl1c
PE=3 SV=1
Length = 415
Score = 111 bits (277), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 148/279 (53%), Gaps = 26/279 (9%)
Query: 3 CGMLVQDPSK-----GDPNDVDAIFNQAKELGAVEGPLEHL-SPSSSSRSFTGTARLLSG 56
G++V+ K G + V+ +F+ AK GAV + + P S G
Sbjct: 138 SGLVVESAPKKGKNGGSGDIVNDVFDSAKRHGAVASNEKKVEKPDSFDSVGYQLGATDQG 197
Query: 57 ETVPSAPQQPEP----IVHNIVFWANGFTVNDGPLRRLDDPENASFLESIKKSECPKELE 112
S P++ +P + + FW GFT++DGPLR+ D+PEN L+ I++ P+EL+
Sbjct: 198 NRNVSKPKEKDPNSQVVEVKVTFWNQGFTIDDGPLRKYDNPENKELLDDIQRGIVPRELQ 257
Query: 113 -PADKRSSVHVNLIRR-DVKCPEPEK-HHVPFQGVGRTLG----------SSSTAASEPT 159
A + + V LI + EP K +V F G G+TLG +++ +
Sbjct: 258 KKATTPNGLSVTLINNHNQDYVEPAKPKYVAFSGGGQTLGSSSTSTNNNNNNNNNNNNRA 317
Query: 160 VDSTPVNTASSSSEGLVVDENLPSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDASRPG 219
++ T++ + + VD++ P+T+VQIRLA+G+RL FN HT+ D+ ++I++S G
Sbjct: 318 TTTSTTTTSTPNVSSINVDQSQPTTTVQIRLANGSRLSTTFNHSHTLQDVINYINSSS-G 376
Query: 220 TARNYQLQMMGFPPKVLADRTQ-TIEQAGLANSVVIQKF 257
+ +++ L + GFP K + + T T++ AGL N+++IQK
Sbjct: 377 SNQSFDL-LTGFPQKPVTNPTSTTLKDAGLLNALLIQKL 414
>sp|Q9UT81|UBX3_SCHPO UBX domain-containing protein 3 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubx3 PE=1 SV=1
Length = 410
Score = 101 bits (251), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 103/216 (47%), Gaps = 23/216 (10%)
Query: 57 ETVPSAPQQPEPIVHNIVFWANGFTVNDGPLRRLDDPENASFLESIKKSECPKELEPADK 116
E P+ Q +P+ + FW NGF+V+DGP+ DDP N L I P L
Sbjct: 200 ENPPTESQPEKPLRRTLYFWRNGFSVDDGPIYTYDDPANQEMLRYINSGRAPLHLLGVSM 259
Query: 117 RSSVHVNLIRR-DVKCPEPEKHHVPFQGVGRTLGSS-----------STAASEPTVDSTP 164
+ V + R D P K PF G G+ LGS+ T S P
Sbjct: 260 NQPIDVVVQHRMDEDYVAPFK---PFSGKGQRLGSTYMQPRMSQMPGGLYTDTSTSSSVP 316
Query: 165 VNTASSSS---EGLVVDENLPSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDASRPGTA 221
+N +S+ L +DEN P+T +Q+RL++G R + NL HT+ DI+ + A PG
Sbjct: 317 INVKPNSTTPHASLQIDENKPTTRIQVRLSNGGRTVLTVNLSHTLHDIYEAVRAVSPG-- 374
Query: 222 RNYQLQMMGFPPKVLADR-TQTIEQAGLANSVVIQK 256
N+ L + FP K L D + T+E A L N+ ++QK
Sbjct: 375 -NFILS-VPFPAKTLEDDPSVTVEAASLKNASLVQK 408
>sp|P34223|UBX1_YEAST UBX domain-containing protein 1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SHP1 PE=1 SV=1
Length = 423
Score = 101 bits (251), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 127/275 (46%), Gaps = 27/275 (9%)
Query: 3 CGMLVQDPSKGDPN----DVDAIFNQAKELGAVEGPLEHLSPSSSSRSFTGTARLLSGET 58
G+ V DPS DPN D+ + ++GA G + + FTG L G T
Sbjct: 155 SGLEVTDPS--DPNSLLKDLLEKARRGGQMGAENGFRDDEDHEMGANRFTGRGFRL-GST 211
Query: 59 VPSAPQ-----------QPEPIVHNIVFWANGFTVNDGPLRRLDDPENASFLESIKKSEC 107
+ +A + +PE + I FW GF V DGPL R DDP N+ +L + +
Sbjct: 212 IDAADEVVEDNTSQSQRRPEKVTREITFWKEGFQVADGPLYRYDDPANSFYLSELNQGRA 271
Query: 108 PKELEPADKRSSVHVNLIRR-DVKCPEPEKHHVPFQGVGRTLGSSSTAASEPTVDSTPVN 166
P +L V VN+ ++ D P + F G G+ LGS S P P N
Sbjct: 272 PLKLLDVQFGQEVEVNVYKKLDESYKAPTRKLGGFSGQGQRLGSPIPGESSPA--EVPKN 329
Query: 167 TASSSSEGLVVDENLPS---TSVQIRLADGTRLIAHFNLHHTISDIHSFIDA-SRPGTAR 222
++ E + D N P TS+QIR A+G R + H N T+ ++ + + + +R
Sbjct: 330 ETPAAQEQPMPD-NEPKQGDTSIQIRYANGKREVLHCNSTDTVKFLYEHVTSNANTDPSR 388
Query: 223 NYQLQMMGFPPKVLADRTQTIEQAGLANSVVIQKF 257
N+ L FP K +++ T++ A L NSVV+Q++
Sbjct: 389 NFTLN-YAFPIKPISNDETTLKDADLLNSVVVQRW 422
>sp|P68543|UBX2A_HUMAN UBX domain-containing protein 2A OS=Homo sapiens GN=UBXN2A PE=2
SV=1
Length = 259
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 108/212 (50%), Gaps = 13/212 (6%)
Query: 51 ARLLSGETVPSAPQQPEPIVHNIVFWANGFTVNDGPLRRLDDPENASFLESIKKSECPKE 110
A+ +S + V A Q+ + V NI W NGFTVND R D + FL SIKK E P E
Sbjct: 44 AQKVSSKCVSPAEQKKQVDV-NIKLWKNGFTVNDD-FRSYSDGASQQFLNSIKKGELPSE 101
Query: 111 LEPADKRSSVHVNLI-RRDVKCPEPEKHHVPFQGVGRTLGSSSTAASEPTVDSTPVNTAS 169
L+ + V V + +++ C + PF G G LGS++ P + S N
Sbjct: 102 LQGIFDKEEVDVKVEDKKNEICLSTKPVFQPFSGQGHRLGSAT-----PKIVSKAKNIEV 156
Query: 170 SSSEGL--VVDENL-PSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDASRPGTARNYQL 226
+ L V NL P T++QI LA+G R++ FN+ H +S I FI+ + G+ R+
Sbjct: 157 ENKNNLSAVPLNNLEPITNIQIWLANGKRIVQKFNITHRVSHIKDFIEKYQ-GSQRSPPF 215
Query: 227 QM-MGFPPKVLADRTQTIEQAGLANSVVIQKF 257
+ P L D T T+E+A L N+V+IQ+
Sbjct: 216 SLATALPVLRLLDETLTLEEADLQNAVIIQRL 247
>sp|Q99KJ0|UBX2A_MOUSE UBX domain-containing protein 2A OS=Mus musculus GN=Ubxn2a PE=2
SV=1
Length = 258
Score = 90.9 bits (224), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 98/206 (47%), Gaps = 8/206 (3%)
Query: 55 SGETVPSAPQQPEPIVHNIVFWANGFTVNDGPLRRLDDPENASFLESIKKSECPKELEPA 114
+G S +Q + + NI W NGFTVND R D + FL SIKK E P EL
Sbjct: 48 AGAKCLSPTEQKKQVDVNIKLWKNGFTVNDD-FRSYSDGASQQFLNSIKKGELPSELWGI 106
Query: 115 DKRSSVHVNL-IRRDVKCPEPEKHHVPFQGVGRTLGSSSTAASEPTVDSTPVNTASSSSE 173
+ V V + +++ C + PF G G LGS A + V + S+
Sbjct: 107 FDKEEVDVKVEDKKNEVCMSTKPVFQPFSGQGHRLGS---ATPRIVSKAKSVEVDNKSTL 163
Query: 174 GLVVDENL-PSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDASRPGTARNYQLQM-MGF 231
V NL P T +QI LA+G R + FN+ H +S I FI+ + G+ R+ +
Sbjct: 164 SAVSLNNLEPITRIQIWLANGERTVQRFNVSHRVSHIKDFIEKYQ-GSQRSPPFALATAL 222
Query: 232 PPKVLADRTQTIEQAGLANSVVIQKF 257
P D T T+E+A L N+V+IQ+
Sbjct: 223 PFLRFLDETLTLEEADLKNAVIIQRL 248
>sp|Q922Y1|UBXN1_MOUSE UBX domain-containing protein 1 OS=Mus musculus GN=Ubxn1 PE=1 SV=1
Length = 297
Score = 40.4 bits (93), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 7/111 (6%)
Query: 149 GSSSTAASEPTVDSTPVNTASSSSEGLVVDENLPSTSVQIRLADGTRLIAHFNLHHTISD 208
GS + +S P D PV SS S+ +Q+RL DGT L F ++
Sbjct: 181 GSVGSRSSPPATDPGPV--PSSPSQEPPTKREYDQCRIQVRLPDGTSLTQTFRAREQLAA 238
Query: 209 IHSFIDASR---PGTARNYQLQMMGFPPKVL--ADRTQTIEQAGLANSVVI 254
+ +++ R PG ++ + GFP + AD + +++ GL S V+
Sbjct: 239 VRLYVELHRGEEPGQDQDPVQLLSGFPRRAFSEADMERPLQELGLVPSAVL 289
>sp|Q499N6|UBXN1_RAT UBX domain-containing protein 1 OS=Rattus norvegicus GN=Ubxn1 PE=2
SV=2
Length = 297
Score = 40.0 bits (92), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 10/118 (8%)
Query: 142 QGVGRTLGSSSTAASEPTVDSTPVNTASSSSEGLVVDENLPSTSVQIRLADGTRLIAHFN 201
Q G T+GS S S P D PV SS + +Q+RL DGT L F
Sbjct: 177 QKYGGTVGSRS---SPPATDPGPV--PSSPRQEPPTKREYDQCRIQVRLPDGTSLTQTFR 231
Query: 202 LHHTISDIHSFIDASR---PGTARNYQLQMMGFPPKVL--ADRTQTIEQAGLANSVVI 254
++ + +++ R PG ++ + GFP + AD + +++ GL S V+
Sbjct: 232 AREQLAAVRLYVELHRGEEPGQDQDPVQLLSGFPRRAFSEADMERPLQELGLVPSAVL 289
>sp|Q06682|UBX5_YEAST UBX domain-containing protein 5 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=UBX5 PE=1 SV=1
Length = 500
Score = 37.4 bits (85), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 183 STSVQIRLADGTRLIAHFN-LHHTISDIHSFIDASRPGTARNYQLQMMGFPPKVLADR-T 240
+T +QIR DG+RL+ FN L T+ I+ I G A + + + + L D+
Sbjct: 419 TTRIQIRTGDGSRLVRRFNALEDTVRTIYEVIKTEMDGFA-DSRFTLNDHQREDLIDKLN 477
Query: 241 QTIEQAGLANSVVI 254
TI AGL NS ++
Sbjct: 478 MTIADAGLKNSSLL 491
>sp|Q6GL77|UBXN1_XENTR UBX domain-containing protein 1 OS=Xenopus tropicalis GN=ubxn1 PE=2
SV=1
Length = 287
Score = 35.8 bits (81), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 4/110 (3%)
Query: 149 GSSSTAASEPTVDSTPVNTASSSS--EGLVVDENLPSTSVQIRLADGTRLIAHFNLHHTI 206
G+ S S P S P T S SS + + +Q+RL DG+ L F +
Sbjct: 173 GAGSEPISPPAEASIPATTPSPSSPVQEPPTKKEYDQCRIQVRLLDGSALSQTFRAREQL 232
Query: 207 SDIHSFIDASRPGTARNYQLQMMGFPPKVLA--DRTQTIEQAGLANSVVI 254
+ + +++ + PG A + FP +V D + +++ GL S V+
Sbjct: 233 AAVRLYVELNWPGGAPGPFNLLTSFPRRVFTEEDMEKPLQELGLVPSAVL 282
>sp|O14048|UBX2_SCHPO UBX domain-containing protein 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubx2 PE=1 SV=1
Length = 427
Score = 35.4 bits (80), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 184 TSVQIRLADGTRLIAHFNLHHTISDIHSFIDASRPGTARNYQLQMMGFPPKVL-ADRTQT 242
T +QIR+ +G R I F+L +S +++++ G + Q + F K L T
Sbjct: 354 TRIQIRMPNGARFIRRFSLTDPVSKVYAYVKGVAEGADK--QPFSLTFQRKSLWTSLDST 411
Query: 243 IEQAGLANSVVIQKF 257
I++AG+ N+ + +F
Sbjct: 412 IKEAGIQNTALQFEF 426
>sp|Q32KW2|UBXN1_BOVIN UBX domain-containing protein 1 OS=Bos taurus GN=UBXN1 PE=2 SV=1
Length = 297
Score = 35.0 bits (79), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 7/111 (6%)
Query: 149 GSSSTAASEPTVDSTPVNTASSSSEGLVVDENLPSTSVQIRLADGTRLIAHFNLHHTISD 208
G+ + S P + PV SS S +Q+RL DGT L F ++
Sbjct: 181 GNVGSQPSPPATEPGPV--PSSPSREPPTKREYDQCRIQVRLPDGTSLTQTFRAREQLAA 238
Query: 209 IHSFIDASRP---GTARNYQLQMMGFPPKVL--ADRTQTIEQAGLANSVVI 254
+ +++ R G A++ + GFP + AD + +++ GL S V+
Sbjct: 239 VRLYVELHRGEELGGAQDPVQLLSGFPRRAFSEADMERPLQELGLVPSAVL 289
>sp|Q92T74|PHK1_RHIME Probable phosphoketolase 1 OS=Rhizobium meliloti (strain 1021)
GN=R00106 PE=3 SV=1
Length = 789
Score = 34.7 bits (78), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 42/114 (36%), Gaps = 19/114 (16%)
Query: 86 PLRRLDDPENASFLESIKKSECPKELEPADKRSSV-----------------HVN--LIR 126
P+ +D PE+ LE KS P+EL D R + H N L+
Sbjct: 296 PMGDMDKPEHIRILEGWMKSYRPEELFDGDGRLTAELAALAPTGRRRMSDNPHANGGLLL 355
Query: 127 RDVKCPEPEKHHVPFQGVGRTLGSSSTAASEPTVDSTPVNTASSSSEGLVVDEN 180
RD+K P+ + V Q G S+ D +N S + DEN
Sbjct: 356 RDLKMPDFRDYAVAVQSPGAATAESARVMGSYLRDVMKLNLKSGNFRLFSPDEN 409
>sp|Q6IP50|UBX1A_XENLA UBX domain-containing protein 1-A OS=Xenopus laevis GN=ubxn1-a PE=2
SV=1
Length = 296
Score = 34.7 bits (78), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 4/110 (3%)
Query: 149 GSSSTAASEPTVDSTPVNTASSSS--EGLVVDENLPSTSVQIRLADGTRLIAHFNLHHTI 206
G+SS S P S P T S SS + + +Q+RL DG+ L F +
Sbjct: 182 GASSEPISPPAETSIPATTPSPSSPVQEPPTKKEYDQCRIQVRLLDGSALSQTFRAREQL 241
Query: 207 SDIHSFIDASRPGTARNYQLQMMGFPPKVLA--DRTQTIEQAGLANSVVI 254
+ + +++ + PG + FP +V D + +++ GL + V+
Sbjct: 242 AAVRLYVELNWPGGPPGPFSLLTSFPQRVFTEEDMEKPLQELGLVPTAVL 291
>sp|Q04323|UBXN1_HUMAN UBX domain-containing protein 1 OS=Homo sapiens GN=UBXN1 PE=1 SV=2
Length = 297
Score = 32.3 bits (72), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 186 VQIRLADGTRLIAHFNLHHTISDIHSFIDASRP---GTARNYQLQMMGFPPKVL--ADRT 240
+Q+RL DGT L F ++ + +++ R G ++ + GFP + AD
Sbjct: 216 IQVRLPDGTSLTQTFRAREQLAAVRLYVELHRGEELGGGQDPVQLLSGFPRRAFSEADME 275
Query: 241 QTIEQAGLANSVVI 254
+ +++ GL S V+
Sbjct: 276 RPLQELGLVPSAVL 289
>sp|P38349|UBX7_YEAST UBX domain-containing protein 7 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=UBX7 PE=1 SV=1
Length = 436
Score = 32.3 bits (72), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 186 VQIRLADGTRLIAHFNLHHTISDIHSFIDASR 217
+QIR+ DG L FN T++D+ ++D +R
Sbjct: 219 LQIRMTDGKTLKHEFNSSETLNDVRKWVDVNR 250
>sp|Q9BZE9|ASPC1_HUMAN Tether containing UBX domain for GLUT4 OS=Homo sapiens GN=ASPSCR1
PE=1 SV=1
Length = 553
Score = 32.0 bits (71), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 179 ENLPSTSVQIRLADGTRLIAHFNLHHTISDIHSFIDASRPGTARNYQLQMMGFPPK-VLA 237
E P ++++ D L F T+ D+ F+ + ++ L + PPK VL
Sbjct: 386 ERYPKVALRVLFPDRYVLQGFFRPSETVGDLRDFVRSHLGNPELSFYLFIT--PPKTVLD 443
Query: 238 DRTQTIEQAGLANSVVI 254
D TQT+ QA L + ++
Sbjct: 444 DHTQTLFQANLFPAALV 460
>sp|Q6GLV4|UBX1B_XENLA UBX domain-containing protein 1-B OS=Xenopus laevis GN=ubxn1-b PE=2
SV=1
Length = 290
Score = 32.0 bits (71), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 4/110 (3%)
Query: 149 GSSSTAASEPTVDSTPVNTASSSS--EGLVVDENLPSTSVQIRLADGTRLIAHFNLHHTI 206
G+ S S P S P S SS + + +Q+RL DG+ L F +
Sbjct: 176 GAGSEPISPPAETSVPATAPSPSSPVQEPPTKKEYDQCRIQVRLLDGSALSQTFRAREQL 235
Query: 207 SDIHSFIDASRPGTARNYQLQMMGFPPKVLA--DRTQTIEQAGLANSVVI 254
+ + +++ + PG + FP +V D + +++ GL + V+
Sbjct: 236 AAVRLYVELNWPGGPPEPFSLLTSFPRRVFTEEDMEKPLQELGLVPTAVL 285
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.130 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,694,225
Number of Sequences: 539616
Number of extensions: 4272375
Number of successful extensions: 9632
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 9572
Number of HSP's gapped (non-prelim): 56
length of query: 257
length of database: 191,569,459
effective HSP length: 115
effective length of query: 142
effective length of database: 129,513,619
effective search space: 18390933898
effective search space used: 18390933898
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)