Query 025135
Match_columns 257
No_of_seqs 234 out of 1279
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 04:24:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025135.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025135hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a3u_A NCR, NADH\:flavin oxido 100.0 6.7E-65 2.3E-69 466.0 21.7 223 9-246 136-358 (358)
2 4gbu_A NADPH dehydrogenase 1; 100.0 4.5E-63 1.5E-67 460.0 18.9 233 9-247 156-392 (400)
3 2hsa_B 12-oxophytodienoate red 100.0 1.3E-61 4.6E-66 449.8 25.6 247 9-257 155-402 (402)
4 4ab4_A Xenobiotic reductase B; 100.0 1.3E-61 4.6E-66 443.7 24.6 215 9-246 137-351 (362)
5 3gka_A N-ethylmaleimide reduct 100.0 2.1E-61 7.2E-66 442.3 24.2 214 9-245 145-358 (361)
6 2r14_A Morphinone reductase; H 100.0 8E-59 2.7E-63 428.1 24.1 222 9-246 150-371 (377)
7 1icp_A OPR1, 12-oxophytodienoa 100.0 9E-59 3.1E-63 427.7 22.3 224 9-246 151-374 (376)
8 3tjl_A NADPH dehydrogenase; OL 100.0 2E-59 6.8E-64 433.7 16.6 227 9-246 151-389 (407)
9 2gou_A Oxidoreductase, FMN-bin 100.0 1.6E-57 5.4E-62 418.0 24.7 220 9-245 145-364 (365)
10 1vyr_A Pentaerythritol tetrani 100.0 2.8E-57 9.4E-62 416.3 24.7 219 9-244 145-364 (364)
11 3aty_A Tcoye, prostaglandin F2 100.0 3.7E-57 1.3E-61 417.1 23.5 218 9-245 157-378 (379)
12 3gr7_A NADPH dehydrogenase; fl 100.0 5.9E-53 2E-57 384.3 24.2 200 9-223 128-328 (340)
13 3hgj_A Chromate reductase; TIM 100.0 6.8E-53 2.3E-57 385.3 24.4 201 9-222 136-338 (349)
14 3kru_A NADH:flavin oxidoreduct 100.0 4.9E-52 1.7E-56 378.2 22.9 196 9-220 127-324 (343)
15 3l5a_A NADH/flavin oxidoreduct 100.0 1.4E-52 4.7E-57 390.9 18.0 201 9-220 154-364 (419)
16 3l5l_A Xenobiotic reductase A; 100.0 5E-52 1.7E-56 381.3 20.3 201 9-221 142-344 (363)
17 3k30_A Histamine dehydrogenase 100.0 2.1E-50 7.2E-55 397.6 22.7 220 9-240 140-376 (690)
18 1z41_A YQJM, probable NADH-dep 100.0 1.7E-49 5.7E-54 361.4 23.3 197 9-220 128-325 (338)
19 1o94_A Tmadh, trimethylamine d 100.0 2.7E-49 9.2E-54 392.0 20.8 201 9-220 133-339 (729)
20 1ps9_A 2,4-dienoyl-COA reducta 100.0 1.8E-47 6.2E-52 375.5 24.2 221 10-240 126-363 (671)
21 3b0p_A TRNA-dihydrouridine syn 100.0 2.2E-28 7.4E-33 223.3 15.7 169 24-218 69-241 (350)
22 1vhn_A Putative flavin oxidore 100.0 6E-29 2E-33 224.2 8.2 158 24-217 70-228 (318)
23 1f76_A Dihydroorotate dehydrog 99.9 2E-23 7E-28 189.1 16.0 168 19-218 147-335 (336)
24 1jub_A Dihydroorotate dehydrog 99.9 2.2E-21 7.6E-26 173.8 16.3 166 23-219 104-289 (311)
25 2e6f_A Dihydroorotate dehydrog 99.9 9.9E-21 3.4E-25 169.8 15.8 167 23-219 104-291 (314)
26 1ep3_A Dihydroorotate dehydrog 99.8 2.5E-21 8.6E-26 172.9 9.8 164 24-219 110-287 (311)
27 1tv5_A Dhodehase, dihydroorota 99.8 4E-19 1.4E-23 166.1 16.7 167 20-219 192-420 (443)
28 4ef8_A Dihydroorotate dehydrog 99.8 1.3E-17 4.5E-22 151.9 17.0 166 24-219 138-324 (354)
29 3oix_A Putative dihydroorotate 99.8 1.1E-17 3.6E-22 152.0 15.6 164 24-219 140-322 (345)
30 1gte_A Dihydropyrimidine dehyd 99.8 6.8E-18 2.3E-22 172.6 15.7 166 24-218 647-833 (1025)
31 3zwt_A Dihydroorotate dehydrog 99.7 5.6E-17 1.9E-21 148.5 18.1 165 23-219 162-345 (367)
32 2gl5_A Putative dehydratase pr 99.7 7.7E-17 2.6E-21 149.5 16.3 143 24-203 151-300 (410)
33 3i65_A Dihydroorotate dehydrog 99.7 6.4E-17 2.2E-21 149.6 15.4 166 22-219 196-392 (415)
34 2poz_A Putative dehydratase; o 99.7 6.9E-17 2.4E-21 149.1 15.3 141 24-202 138-280 (392)
35 2o56_A Putative mandelate race 99.6 7.8E-15 2.7E-19 135.9 16.5 138 24-202 153-296 (407)
36 2ox4_A Putative mandelate race 99.6 1.7E-14 5.8E-19 133.4 16.9 141 24-205 147-293 (403)
37 2qq6_A Mandelate racemase/muco 99.6 7.6E-14 2.6E-18 129.4 15.8 137 23-202 149-291 (410)
38 1rvk_A Isomerase/lactonizing e 99.5 1.4E-13 4.8E-18 126.4 16.4 144 23-215 149-295 (382)
39 2pgw_A Muconate cycloisomerase 99.5 5E-13 1.7E-17 122.8 17.1 136 24-216 148-285 (384)
40 2nli_A Lactate oxidase; flavoe 99.5 3.8E-13 1.3E-17 123.2 12.7 153 25-208 146-319 (368)
41 2ovl_A Putative racemase; stru 99.5 1.4E-12 4.7E-17 119.4 16.3 138 24-216 147-286 (371)
42 2og9_A Mandelate racemase/muco 99.5 8.2E-13 2.8E-17 121.8 14.7 128 23-205 162-291 (393)
43 1mdl_A Mandelate racemase; iso 99.4 1.2E-12 4.1E-17 119.2 15.0 137 24-215 145-283 (359)
44 1kbi_A Cytochrome B2, L-LCR; f 99.4 1.6E-12 5.5E-17 123.7 15.9 153 26-209 261-439 (511)
45 2rdx_A Mandelate racemase/muco 99.4 1.8E-12 6.1E-17 119.0 15.0 133 24-215 146-280 (379)
46 2nql_A AGR_PAT_674P, isomerase 99.4 2E-12 6.7E-17 119.1 15.2 136 23-215 164-301 (388)
47 3stp_A Galactonate dehydratase 99.4 2.9E-12 9.8E-17 119.0 16.3 136 24-208 180-317 (412)
48 3p3b_A Mandelate racemase/muco 99.4 1.3E-12 4.3E-17 120.6 13.7 132 22-202 147-285 (392)
49 2qgy_A Enolase from the enviro 99.4 3.3E-12 1.1E-16 117.7 15.2 132 24-210 150-283 (391)
50 2hzg_A Mandelate racemase/muco 99.4 9.2E-12 3.1E-16 115.1 16.5 140 24-215 146-290 (401)
51 2pp0_A L-talarate/galactarate 99.4 5.4E-12 1.8E-16 116.6 14.5 127 24-205 176-304 (398)
52 1jcn_A Inosine monophosphate d 99.4 1.5E-11 5.2E-16 117.1 16.8 139 27-212 256-397 (514)
53 2gdq_A YITF; mandelate racemas 99.3 9.1E-12 3.1E-16 114.4 13.8 123 25-202 141-266 (382)
54 2qde_A Mandelate racemase/muco 99.3 1.4E-11 4.9E-16 113.6 14.4 127 24-206 146-274 (397)
55 3tjx_A Dihydroorotate dehydrog 99.3 2.7E-11 9.2E-16 110.2 15.9 154 36-219 153-324 (354)
56 1nu5_A Chloromuconate cycloiso 99.3 4.2E-11 1.4E-15 109.4 16.9 137 24-215 143-282 (370)
57 2p8b_A Mandelate racemase/muco 99.3 2.2E-11 7.4E-16 111.2 14.7 136 24-215 142-280 (369)
58 1mzh_A Deoxyribose-phosphate a 99.3 1.3E-11 4.6E-16 105.6 12.3 133 29-216 74-214 (225)
59 3bjs_A Mandelate racemase/muco 99.3 1.7E-11 5.8E-16 114.3 13.4 123 25-203 187-312 (428)
60 2qdd_A Mandelate racemase/muco 99.3 3E-11 1E-15 110.8 14.5 133 24-215 146-280 (378)
61 2z6i_A Trans-2-enoyl-ACP reduc 99.3 2.8E-11 9.4E-16 109.2 13.9 132 27-220 77-215 (332)
62 2oz8_A MLL7089 protein; struct 99.3 4.3E-11 1.5E-15 110.2 15.2 130 24-209 146-279 (389)
63 3rcy_A Mandelate racemase/muco 99.3 6.9E-11 2.4E-15 110.4 16.7 140 24-207 147-289 (433)
64 1tkk_A Similar to chloromucona 99.3 9.2E-11 3.1E-15 106.9 16.7 136 25-215 142-281 (366)
65 2zad_A Muconate cycloisomerase 99.3 1.1E-10 3.7E-15 105.7 17.0 137 24-217 140-282 (345)
66 1tzz_A Hypothetical protein L1 99.3 3.9E-11 1.3E-15 110.5 13.7 126 24-204 166-297 (392)
67 2ps2_A Putative mandelate race 99.3 5.8E-11 2E-15 108.5 14.4 132 24-214 147-281 (371)
68 1p0k_A Isopentenyl-diphosphate 99.3 9.9E-11 3.4E-15 106.2 15.7 140 33-208 135-286 (349)
69 3sjn_A Mandelate racemase/muco 99.2 4.4E-11 1.5E-15 109.6 12.1 128 25-205 148-278 (374)
70 2hxt_A L-fuconate dehydratase; 99.2 7.6E-11 2.6E-15 110.2 13.9 123 24-202 199-324 (441)
71 1vrd_A Inosine-5'-monophosphat 99.2 2.7E-10 9.3E-15 107.8 15.2 144 25-214 236-381 (494)
72 3ozy_A Putative mandelate race 99.2 2.7E-10 9.1E-15 104.9 14.6 136 24-215 152-290 (389)
73 1eep_A Inosine 5'-monophosphat 99.2 2.5E-10 8.7E-15 105.5 14.3 138 27-213 154-296 (404)
74 1sjd_A N-acylamino acid racema 99.1 2.6E-10 9E-15 104.0 11.8 119 24-201 142-262 (368)
75 4e5t_A Mandelate racemase / mu 99.1 6.1E-10 2.1E-14 103.0 14.3 140 24-208 152-295 (404)
76 3mqt_A Mandelate racemase/muco 99.1 6.8E-10 2.3E-14 102.4 14.2 139 18-209 147-289 (394)
77 4e4u_A Mandalate racemase/muco 99.1 1E-09 3.5E-14 101.8 15.0 140 24-207 145-287 (412)
78 3sbf_A Mandelate racemase / mu 99.1 8.6E-10 3E-14 101.9 14.2 159 24-215 134-295 (401)
79 3v3w_A Starvation sensing prot 99.1 8.8E-10 3E-14 102.6 14.2 152 24-206 150-311 (424)
80 1gox_A (S)-2-hydroxy-acid oxid 99.1 1.3E-09 4.4E-14 99.8 15.0 151 27-208 138-315 (370)
81 3tji_A Mandelate racemase/muco 99.1 1.3E-09 4.5E-14 101.4 14.6 160 24-215 155-316 (422)
82 3mkc_A Racemase; metabolic pro 99.1 1.9E-09 6.5E-14 99.4 15.5 135 19-206 153-291 (394)
83 3r4e_A Mandelate racemase/muco 99.1 8.6E-10 3E-14 102.5 13.2 151 24-206 144-305 (418)
84 2nzl_A Hydroxyacid oxidase 1; 99.1 1.3E-09 4.5E-14 100.5 14.1 153 26-209 161-343 (392)
85 3vcn_A Mannonate dehydratase; 99.1 7.8E-10 2.7E-14 103.0 12.3 152 24-206 151-312 (425)
86 3eez_A Putative mandelate race 99.1 1.9E-09 6.4E-14 98.9 14.6 134 24-216 146-281 (378)
87 3ddm_A Putative mandelate race 99.1 1.1E-09 3.7E-14 101.0 13.1 123 24-202 156-281 (392)
88 3go2_A Putative L-alanine-DL-g 99.1 2.5E-09 8.5E-14 99.1 15.2 136 24-202 144-292 (409)
89 3jva_A Dipeptide epimerase; en 99.1 3.5E-09 1.2E-13 96.2 15.8 135 25-215 141-277 (354)
90 3r2g_A Inosine 5'-monophosphat 99.1 3.7E-09 1.3E-13 96.2 15.7 149 13-212 73-238 (361)
91 3rr1_A GALD, putative D-galact 99.1 1.7E-09 5.8E-14 100.1 13.5 135 24-205 126-262 (405)
92 1vcf_A Isopentenyl-diphosphate 99.0 2.1E-09 7.2E-14 96.8 13.4 137 36-209 143-292 (332)
93 3i4k_A Muconate lactonizing en 99.0 5.1E-09 1.7E-13 96.1 15.9 136 25-215 150-288 (383)
94 4e4f_A Mannonate dehydratase; 99.0 1.4E-09 4.8E-14 101.3 11.8 149 26-205 152-312 (426)
95 3t6c_A RSPA, putative MAND fam 99.0 6.5E-09 2.2E-13 97.2 16.0 155 24-209 156-328 (440)
96 4dwd_A Mandelate racemase/muco 99.0 5E-09 1.7E-13 96.6 14.9 133 24-206 140-275 (393)
97 3tj4_A Mandelate racemase; eno 99.0 8.3E-09 2.8E-13 94.4 15.5 124 24-202 152-278 (372)
98 3q45_A Mandelate racemase/muco 99.0 7E-09 2.4E-13 94.7 14.5 129 25-209 142-272 (368)
99 3toy_A Mandelate racemase/muco 99.0 9.7E-09 3.3E-13 94.3 14.9 125 24-203 168-295 (383)
100 3tdn_A FLR symmetric alpha-bet 99.0 2.1E-10 7.1E-15 99.0 3.2 88 115-218 157-245 (247)
101 1y0e_A Putative N-acetylmannos 99.0 2E-08 6.8E-13 84.9 15.4 137 30-216 80-217 (223)
102 3ugv_A Enolase; enzyme functio 98.9 1.3E-08 4.6E-13 93.6 15.0 128 24-206 172-304 (390)
103 3bw2_A 2-nitropropane dioxygen 98.9 1.2E-08 4E-13 93.2 14.4 133 27-212 111-247 (369)
104 3dg3_A Muconate cycloisomerase 98.9 9.4E-09 3.2E-13 93.8 13.7 124 24-202 140-266 (367)
105 3gd6_A Muconate cycloisomerase 98.9 2E-08 6.9E-13 92.4 15.6 134 24-215 143-281 (391)
106 3ro6_B Putative chloromuconate 98.9 7.8E-09 2.7E-13 94.0 12.3 130 24-209 141-273 (356)
107 4hnl_A Mandelate racemase/muco 98.9 1.8E-08 6.1E-13 93.6 14.6 145 24-201 154-301 (421)
108 1ypf_A GMP reductase; GUAC, pu 98.9 1.8E-08 6.1E-13 91.0 14.0 133 29-207 109-244 (336)
109 3dip_A Enolase; structural gen 98.9 3E-08 1E-12 91.8 15.8 134 28-205 161-298 (410)
110 3tcs_A Racemase, putative; PSI 98.9 3.1E-08 1.1E-12 91.1 15.7 136 32-215 156-293 (388)
111 3khj_A Inosine-5-monophosphate 98.9 5.2E-08 1.8E-12 88.8 16.9 152 13-215 76-249 (361)
112 4dxk_A Mandelate racemase / mu 98.9 1.1E-08 3.9E-13 94.3 12.4 132 29-203 158-292 (400)
113 1yxy_A Putative N-acetylmannos 98.9 1.6E-08 5.6E-13 86.2 12.3 130 29-212 92-224 (234)
114 3r0u_A Enzyme of enolase super 98.9 6E-08 2.1E-12 88.9 16.9 126 25-206 144-273 (379)
115 2y88_A Phosphoribosyl isomeras 98.9 5.5E-09 1.9E-13 89.5 9.3 88 115-217 150-240 (244)
116 3sgz_A Hydroxyacid oxidase 2; 98.9 4.7E-08 1.6E-12 88.6 15.8 103 75-208 202-307 (352)
117 3my9_A Muconate cycloisomerase 98.9 1.3E-08 4.4E-13 93.2 11.8 128 26-208 149-278 (377)
118 1chr_A Chloromuconate cycloiso 98.9 2.9E-08 9.9E-13 90.6 13.8 124 28-206 148-273 (370)
119 4fxs_A Inosine-5'-monophosphat 98.9 2.4E-08 8.2E-13 94.7 13.5 136 26-210 231-371 (496)
120 3tdn_A FLR symmetric alpha-bet 98.9 8.2E-09 2.8E-13 88.9 9.4 87 115-217 36-123 (247)
121 1r0m_A N-acylamino acid racema 98.8 9.8E-09 3.4E-13 93.8 10.0 118 24-201 149-268 (375)
122 2gjl_A Hypothetical protein PA 98.8 1.3E-07 4.4E-12 84.8 17.1 133 28-220 86-225 (328)
123 4avf_A Inosine-5'-monophosphat 98.8 3.4E-08 1.2E-12 93.5 13.7 136 26-210 229-369 (490)
124 2zc8_A N-acylamino acid racema 98.8 1.5E-08 5E-13 92.4 10.2 119 24-202 142-262 (369)
125 4a35_A Mitochondrial enolase s 98.8 1.8E-07 6.2E-12 87.4 16.2 127 24-206 202-333 (441)
126 3mwc_A Mandelate racemase/muco 98.8 5.2E-08 1.8E-12 90.0 12.3 127 24-209 164-292 (400)
127 1p4c_A L(+)-mandelate dehydrog 98.8 8.2E-08 2.8E-12 88.1 13.4 103 76-209 211-314 (380)
128 4fo4_A Inosine 5'-monophosphat 98.7 1.3E-07 4.3E-12 86.4 13.7 137 28-213 110-251 (366)
129 3i6e_A Muconate cycloisomerase 98.7 1.1E-07 3.7E-12 87.3 13.3 125 26-206 151-277 (385)
130 1vzw_A Phosphoribosyl isomeras 98.7 9.3E-08 3.2E-12 81.9 11.6 86 116-216 148-236 (244)
131 3dgb_A Muconate cycloisomerase 98.7 1.5E-07 5E-12 86.4 13.4 119 34-207 160-280 (382)
132 1jvn_A Glutamine, bifunctional 98.7 3.7E-08 1.3E-12 94.6 9.7 86 116-216 454-540 (555)
133 3sr7_A Isopentenyl-diphosphate 98.7 1.2E-07 4E-12 86.5 11.8 145 29-207 159-312 (365)
134 3fv9_G Mandelate racemase/muco 98.7 3.3E-07 1.1E-11 84.1 14.3 130 25-208 147-279 (386)
135 3fcp_A L-Ala-D/L-Glu epimerase 98.7 3.1E-07 1.1E-11 84.1 13.9 119 36-209 161-281 (381)
136 3ik4_A Mandelate racemase/muco 98.7 6.4E-07 2.2E-11 81.6 15.6 124 24-202 144-270 (365)
137 4e8g_A Enolase, mandelate race 98.6 4.9E-07 1.7E-11 83.2 14.6 126 24-207 165-293 (391)
138 4dye_A Isomerase; enolase fami 98.6 6.4E-07 2.2E-11 82.6 15.3 126 24-208 169-297 (398)
139 4hpn_A Putative uncharacterize 98.6 6.2E-07 2.1E-11 81.8 15.1 120 26-201 147-268 (378)
140 3bo9_A Putative nitroalkan dio 98.6 6E-07 2E-11 80.6 14.4 121 28-210 92-213 (326)
141 4h1z_A Enolase Q92ZS5; dehydra 98.6 1.1E-06 3.9E-11 81.2 15.7 121 25-201 190-312 (412)
142 3s5s_A Mandelate racemase/muco 98.6 1.4E-06 4.9E-11 80.0 15.6 123 25-202 146-271 (389)
143 2ozt_A TLR1174 protein; struct 98.6 1.6E-06 5.5E-11 77.9 15.6 122 25-201 118-244 (332)
144 1ka9_F Imidazole glycerol phos 98.6 2E-07 7E-12 80.0 9.0 88 115-218 32-120 (252)
145 4h83_A Mandelate racemase/muco 98.5 6.5E-07 2.2E-11 82.2 12.2 121 27-201 168-290 (388)
146 3usb_A Inosine-5'-monophosphat 98.5 1.9E-06 6.4E-11 81.9 15.7 135 28-210 258-396 (511)
147 1thf_D HISF protein; thermophI 98.5 3.6E-07 1.2E-11 78.5 9.7 87 116-218 32-119 (253)
148 3q58_A N-acetylmannosamine-6-p 98.5 1.2E-06 4E-11 74.9 12.8 129 29-214 92-221 (229)
149 2c6q_A GMP reductase 2; TIM ba 98.5 2.2E-06 7.4E-11 77.8 15.2 128 32-208 124-258 (351)
150 1wa3_A 2-keto-3-deoxy-6-phosph 98.5 9.4E-07 3.2E-11 73.6 11.8 47 163-211 139-186 (205)
151 2chr_A Chloromuconate cycloiso 98.5 1.4E-06 4.8E-11 79.2 13.9 123 25-202 145-269 (370)
152 1thf_D HISF protein; thermophI 98.5 4.7E-07 1.6E-11 77.8 10.1 83 116-214 153-236 (253)
153 3u9i_A Mandelate racemase/muco 98.5 1.2E-06 4.2E-11 80.5 13.2 132 24-202 166-300 (393)
154 1ka9_F Imidazole glycerol phos 98.5 5.2E-07 1.8E-11 77.4 9.9 85 116-216 154-239 (252)
155 1qo2_A Molecule: N-((5-phospho 98.5 6.3E-07 2.1E-11 76.7 10.0 86 116-216 146-237 (241)
156 3igs_A N-acetylmannosamine-6-p 98.5 2.2E-06 7.7E-11 73.3 13.2 128 29-213 92-220 (232)
157 3f4w_A Putative hexulose 6 pho 98.5 1.1E-06 3.7E-11 73.5 10.9 129 31-214 70-199 (211)
158 1h5y_A HISF; histidine biosynt 98.5 1.1E-06 3.9E-11 74.7 11.1 83 117-215 157-240 (253)
159 3vkj_A Isopentenyl-diphosphate 98.5 1.7E-06 5.7E-11 79.0 12.6 111 78-210 175-308 (368)
160 1zfj_A Inosine monophosphate d 98.4 4.4E-06 1.5E-10 78.7 15.7 135 27-210 234-373 (491)
161 1yad_A Regulatory protein TENI 98.4 7.1E-06 2.4E-10 69.1 15.1 143 12-214 50-204 (221)
162 1h5y_A HISF; histidine biosynt 98.4 1.2E-06 4E-11 74.6 10.3 88 115-218 34-122 (253)
163 3ffs_A Inosine-5-monophosphate 98.4 5.1E-06 1.7E-10 76.5 15.0 134 29-212 147-285 (400)
164 1qo2_A Molecule: N-((5-phospho 98.4 3.2E-07 1.1E-11 78.5 6.3 86 116-219 32-118 (241)
165 2qjg_A Putative aldolase MJ040 98.4 2E-05 7E-10 68.4 17.6 140 28-215 102-250 (273)
166 3v5c_A Mandelate racemase/muco 98.4 5.3E-06 1.8E-10 76.3 14.0 131 23-201 148-284 (392)
167 2w6r_A Imidazole glycerol phos 98.4 6.9E-07 2.4E-11 77.3 7.4 85 117-217 159-244 (266)
168 1h1y_A D-ribulose-5-phosphate 98.3 6.1E-06 2.1E-10 70.1 12.6 128 31-213 80-212 (228)
169 3cyj_A Mandelate racemase/muco 98.3 1.4E-05 4.7E-10 72.8 15.4 119 25-201 146-269 (372)
170 2qr6_A IMP dehydrogenase/GMP r 98.3 8.7E-06 3E-10 74.7 13.8 133 31-210 171-314 (393)
171 3ekg_A Mandelate racemase/muco 98.3 1.5E-05 5.1E-10 73.5 15.3 119 34-201 170-292 (404)
172 1vzw_A Phosphoribosyl isomeras 98.3 2E-06 6.8E-11 73.5 7.9 85 116-217 34-119 (244)
173 1wuf_A Hypothetical protein LI 98.3 3E-06 1E-10 77.8 9.6 118 25-202 163-282 (393)
174 2y88_A Phosphoribosyl isomeras 98.3 3.3E-06 1.1E-10 72.0 9.2 85 116-217 33-118 (244)
175 2pge_A MENC; OSBS, NYSGXRC, PS 98.2 4.5E-06 1.6E-10 76.2 10.0 123 25-202 164-291 (377)
176 2yzr_A Pyridoxal biosynthesis 98.2 1.1E-05 3.8E-10 72.0 11.8 48 163-211 230-282 (330)
177 3va8_A Probable dehydratase; e 98.2 1.3E-05 4.5E-10 74.8 12.6 119 25-202 193-314 (445)
178 3vdg_A Probable glucarate dehy 98.2 1.6E-05 5.3E-10 74.3 12.7 119 25-202 195-316 (445)
179 2ekc_A AQ_1548, tryptophan syn 98.2 9.8E-05 3.3E-09 64.1 16.7 164 26-208 32-240 (262)
180 4h2h_A Mandelate racemase/muco 98.2 3.7E-05 1.3E-09 70.1 14.7 118 26-201 153-273 (376)
181 3qld_A Mandelate racemase/muco 98.1 1.7E-05 5.8E-10 72.8 11.9 121 24-204 150-272 (388)
182 3fxg_A Rhamnonate dehydratase; 98.1 1.3E-05 4.6E-10 74.9 11.3 119 34-201 176-297 (455)
183 3vc5_A Mandelate racemase/muco 98.1 2.4E-05 8.2E-10 73.0 12.3 119 25-202 190-311 (441)
184 1xi3_A Thiamine phosphate pyro 98.1 3.8E-05 1.3E-09 63.9 12.2 54 161-215 150-203 (215)
185 2agk_A 1-(5-phosphoribosyl)-5- 98.1 1.9E-06 6.5E-11 75.0 4.2 83 118-216 162-253 (260)
186 1xm3_A Thiazole biosynthesis p 98.1 6.3E-05 2.2E-09 65.4 13.9 101 78-209 112-214 (264)
187 3ngj_A Deoxyribose-phosphate a 98.1 7.7E-05 2.6E-09 63.9 14.0 131 28-204 98-231 (239)
188 1wv2_A Thiazole moeity, thiazo 98.1 0.00016 5.4E-09 62.4 15.9 133 25-211 87-227 (265)
189 3oa3_A Aldolase; structural ge 98.1 0.00014 5E-09 63.8 16.0 134 28-204 129-265 (288)
190 3mzn_A Glucarate dehydratase; 98.1 5.5E-05 1.9E-09 70.7 13.6 126 24-201 183-310 (450)
191 2fli_A Ribulose-phosphate 3-ep 98.0 4.1E-05 1.4E-09 64.1 11.2 126 31-213 77-209 (220)
192 3p0w_A Mandelate racemase/muco 98.0 5.1E-05 1.7E-09 71.3 12.9 126 24-201 201-328 (470)
193 2nv1_A Pyridoxal biosynthesis 98.0 0.0001 3.5E-09 65.3 14.0 54 163-217 197-256 (305)
194 1wue_A Mandelate racemase/muco 98.0 2.1E-05 7.1E-10 72.0 9.7 118 25-202 163-282 (386)
195 3o63_A Probable thiamine-phosp 98.0 0.00014 4.9E-09 62.4 14.4 104 83-215 126-232 (243)
196 1rpx_A Protein (ribulose-phosp 98.0 4E-05 1.4E-09 64.9 10.7 50 162-212 163-217 (230)
197 3ovp_A Ribulose-phosphate 3-ep 98.0 0.00012 4.2E-09 62.3 13.6 52 161-213 156-208 (228)
198 4af0_A Inosine-5'-monophosphat 98.0 0.00037 1.3E-08 66.0 17.8 132 26-207 281-418 (556)
199 3ajx_A 3-hexulose-6-phosphate 98.0 0.00013 4.3E-09 60.6 13.3 125 32-211 71-195 (207)
200 1w8s_A FBP aldolase, fructose- 98.0 0.00018 6.1E-09 62.5 14.7 138 29-214 96-243 (263)
201 3pfr_A Mandelate racemase/muco 98.0 6.3E-05 2.1E-09 70.4 12.4 126 24-201 186-313 (455)
202 2opj_A O-succinylbenzoate-COA 98.0 6.3E-05 2.2E-09 67.4 11.7 112 36-202 90-203 (327)
203 2tps_A Protein (thiamin phosph 97.9 9.9E-05 3.4E-09 61.9 12.0 49 162-211 160-209 (227)
204 3vk5_A MOEO5; TIM barrel, tran 97.9 4.4E-05 1.5E-09 66.8 9.9 58 162-220 214-276 (286)
205 2w6r_A Imidazole glycerol phos 97.9 1.5E-05 5.2E-10 68.8 7.0 87 116-218 32-122 (266)
206 4g8t_A Glucarate dehydratase; 97.9 7.8E-05 2.7E-09 69.9 12.3 116 34-201 214-330 (464)
207 2p3z_A L-rhamnonate dehydratas 97.9 0.00027 9.1E-09 65.4 15.0 95 75-201 205-303 (415)
208 1me8_A Inosine-5'-monophosphat 97.9 0.00044 1.5E-08 65.4 16.7 130 29-207 245-386 (503)
209 1qop_A Tryptophan synthase alp 97.9 0.00022 7.4E-09 62.0 13.4 45 162-207 194-239 (268)
210 3nav_A Tryptophan synthase alp 97.9 0.00056 1.9E-08 59.7 15.9 163 25-207 34-242 (271)
211 3r12_A Deoxyribose-phosphate a 97.9 0.00045 1.5E-08 59.8 14.9 133 28-206 114-251 (260)
212 1tqj_A Ribulose-phosphate 3-ep 97.8 9.1E-05 3.1E-09 63.0 10.2 127 31-212 78-211 (230)
213 1rd5_A Tryptophan synthase alp 97.8 0.00016 5.5E-09 62.4 11.7 170 25-207 32-235 (262)
214 1ub3_A Aldolase protein; schif 97.8 0.00024 8.2E-09 60.2 12.3 133 28-206 74-211 (220)
215 1ea0_A Glutamate synthase [NAD 97.8 0.00016 5.3E-09 75.6 13.2 111 77-207 979-1098(1479)
216 3vzx_A Heptaprenylglyceryl pho 97.8 0.00014 4.9E-09 61.9 10.3 54 162-217 168-223 (228)
217 3inp_A D-ribulose-phosphate 3- 97.8 0.00036 1.2E-08 60.1 12.8 51 162-213 179-234 (246)
218 1n7k_A Deoxyribose-phosphate a 97.8 0.00056 1.9E-08 58.4 13.7 132 28-206 91-227 (234)
219 1kko_A 3-methylaspartate ammon 97.8 6.5E-05 2.2E-09 69.4 8.5 111 76-205 216-334 (413)
220 3ndo_A Deoxyribose-phosphate a 97.8 0.00055 1.9E-08 58.3 13.6 135 28-203 83-220 (231)
221 3vnd_A TSA, tryptophan synthas 97.7 0.00037 1.3E-08 60.7 12.3 166 25-207 32-240 (267)
222 3ijl_A Muconate cycloisomerase 97.7 0.00018 6.2E-09 64.6 10.6 115 25-201 136-252 (338)
223 2okt_A OSB synthetase, O-succi 97.7 0.00011 3.6E-09 66.2 8.6 108 32-202 135-244 (342)
224 3qja_A IGPS, indole-3-glycerol 97.7 0.001 3.4E-08 58.1 14.1 124 31-214 128-254 (272)
225 4gj1_A 1-(5-phosphoribosyl)-5- 97.7 9E-05 3.1E-09 63.7 7.3 85 117-217 34-119 (243)
226 1vhc_A Putative KHG/KDPG aldol 97.7 0.00031 1E-08 59.7 10.4 123 17-209 56-192 (224)
227 1ofd_A Ferredoxin-dependent gl 97.6 0.00025 8.7E-09 74.2 11.6 110 77-207 1014-1133(1520)
228 3jr2_A Hexulose-6-phosphate sy 97.6 0.00018 6.1E-09 60.5 8.3 125 31-211 76-203 (218)
229 1kcz_A Beta-methylaspartase; b 97.6 0.00015 5E-09 67.0 8.2 142 24-206 181-335 (413)
230 2fym_A Enolase; RNA degradosom 97.6 0.00021 7.3E-09 66.3 9.3 102 78-201 218-340 (431)
231 1xg4_A Probable methylisocitra 97.6 0.0012 3.9E-08 58.4 13.3 140 25-206 94-239 (295)
232 2htm_A Thiazole biosynthesis p 97.6 0.0022 7.7E-08 55.4 14.7 49 162-211 165-218 (268)
233 3cu2_A Ribulose-5-phosphate 3- 97.6 0.00026 9E-09 60.6 8.9 121 32-208 86-223 (237)
234 1geq_A Tryptophan synthase alp 97.6 0.0063 2.2E-07 51.6 17.6 49 159-208 177-226 (248)
235 2yw3_A 4-hydroxy-2-oxoglutarat 97.5 0.00074 2.5E-08 56.5 10.9 47 163-211 140-187 (207)
236 3o07_A Pyridoxine biosynthesis 97.5 0.00014 4.7E-09 63.4 6.0 51 163-214 188-243 (291)
237 2v82_A 2-dehydro-3-deoxy-6-pho 97.4 0.0034 1.2E-07 52.0 13.6 45 163-208 136-182 (212)
238 3ctl_A D-allulose-6-phosphate 97.4 0.001 3.6E-08 56.6 10.4 123 32-210 74-204 (231)
239 1vc4_A Indole-3-glycerol phosp 97.4 0.0019 6.5E-08 55.7 12.2 124 31-216 121-250 (254)
240 1vcv_A Probable deoxyribose-ph 97.4 0.003 1E-07 53.6 12.9 132 29-197 71-211 (226)
241 1wbh_A KHG/KDPG aldolase; lyas 97.4 0.001 3.5E-08 55.9 9.8 125 17-211 55-193 (214)
242 1to3_A Putative aldolase YIHT; 97.4 0.0095 3.3E-07 52.7 16.4 138 30-208 113-260 (304)
243 1viz_A PCRB protein homolog; s 97.4 0.0003 1E-08 60.4 6.4 54 161-216 169-225 (240)
244 3tsm_A IGPS, indole-3-glycerol 97.3 0.0058 2E-07 53.2 14.6 126 31-216 135-263 (272)
245 2czd_A Orotidine 5'-phosphate 97.3 0.0039 1.3E-07 51.8 12.2 121 30-210 70-193 (208)
246 1q6o_A Humps, 3-keto-L-gulonat 97.3 0.0034 1.2E-07 52.4 11.9 47 163-210 151-199 (216)
247 1x1o_A Nicotinate-nucleotide p 97.2 0.0047 1.6E-07 54.2 13.0 109 60-209 159-275 (286)
248 3w01_A Heptaprenylglyceryl pho 97.2 0.00043 1.5E-08 59.1 6.0 55 162-218 174-230 (235)
249 1w6t_A Enolase; bacterial infe 97.2 0.0036 1.2E-07 58.2 12.8 103 78-202 225-353 (444)
250 3glc_A Aldolase LSRF; TIM barr 97.2 0.0099 3.4E-07 52.4 14.9 128 30-210 130-265 (295)
251 3tqp_A Enolase; energy metabol 97.2 0.0033 1.1E-07 58.3 12.1 103 78-202 221-337 (428)
252 1ujp_A Tryptophan synthase alp 97.2 0.0036 1.2E-07 54.5 11.5 43 163-208 192-235 (271)
253 1jpd_X L-Ala-D/L-Glu epimerase 97.2 0.00052 1.8E-08 61.1 6.2 114 25-201 134-249 (324)
254 1mxs_A KDPG aldolase; 2-keto-3 97.1 0.0015 5E-08 55.5 8.2 121 18-209 66-201 (225)
255 3exr_A RMPD (hexulose-6-phosph 97.1 0.0042 1.4E-07 52.4 10.6 123 34-210 78-204 (221)
256 2a4a_A Deoxyribose-phosphate a 97.0 0.0047 1.6E-07 54.0 10.6 126 28-194 109-247 (281)
257 1p1x_A Deoxyribose-phosphate a 97.0 0.0026 8.7E-08 55.1 8.8 128 28-194 88-220 (260)
258 3qn3_A Enolase; structural gen 97.0 0.004 1.4E-07 57.5 10.4 103 77-202 219-335 (417)
259 1qap_A Quinolinic acid phospho 96.9 0.0093 3.2E-07 52.6 12.0 109 60-209 172-287 (296)
260 2cu0_A Inosine-5'-monophosphat 96.9 0.0093 3.2E-07 56.0 12.6 130 29-207 231-362 (486)
261 1jvn_A Glutamine, bifunctional 96.9 0.0022 7.7E-08 61.3 8.3 90 115-217 281-395 (555)
262 4gj1_A 1-(5-phosphoribosyl)-5- 96.9 0.011 3.9E-07 50.4 12.0 136 29-208 88-230 (243)
263 3cwo_X Beta/alpha-barrel prote 96.9 0.0046 1.6E-07 51.0 9.0 55 162-217 163-218 (237)
264 1i4n_A Indole-3-glycerol phosp 96.8 0.0071 2.4E-07 52.1 10.2 123 33-216 118-244 (251)
265 3nl6_A Thiamine biosynthetic b 96.8 0.038 1.3E-06 52.6 16.1 107 82-211 98-218 (540)
266 3kts_A Glycerol uptake operon 96.8 0.004 1.4E-07 51.5 8.1 46 163-209 140-186 (192)
267 3uj2_A Enolase 1; enzyme funct 96.8 0.014 4.7E-07 54.4 12.7 103 78-202 242-363 (449)
268 2f6u_A GGGPS, (S)-3-O-geranylg 96.8 0.0044 1.5E-07 52.8 8.6 48 162-211 178-227 (234)
269 2vc6_A MOSA, dihydrodipicolina 96.8 0.053 1.8E-06 47.4 15.8 121 28-192 24-152 (292)
270 1r6w_A OSB synthase, O-succiny 96.8 0.0017 5.8E-08 57.8 5.9 106 37-201 127-236 (322)
271 1tqx_A D-ribulose-5-phosphate 96.8 0.024 8.3E-07 47.9 12.9 105 78-211 100-210 (227)
272 2h6r_A Triosephosphate isomera 96.7 0.017 5.7E-07 48.5 11.6 53 163-216 159-213 (219)
273 2b7n_A Probable nicotinate-nuc 96.7 0.005 1.7E-07 53.7 8.4 112 61-209 146-264 (273)
274 3caw_A O-succinylbenzoate synt 96.7 0.0027 9.3E-08 56.6 6.7 106 33-201 118-227 (330)
275 2agk_A 1-(5-phosphoribosyl)-5- 96.7 0.0011 3.9E-08 57.3 4.0 78 117-217 41-123 (260)
276 2uva_G Fatty acid synthase bet 96.7 0.01 3.6E-07 64.5 12.1 94 114-218 703-817 (2060)
277 2pa6_A Enolase; glycolysis, ly 96.7 0.017 5.7E-07 53.4 11.9 102 78-201 223-338 (427)
278 2r8w_A AGR_C_1641P; APC7498, d 96.6 0.11 3.7E-06 46.4 16.6 129 15-194 52-188 (332)
279 2yxg_A DHDPS, dihydrodipicolin 96.6 0.13 4.4E-06 44.8 16.8 121 27-191 23-151 (289)
280 2wkj_A N-acetylneuraminate lya 96.6 0.12 4.3E-06 45.3 16.7 130 14-194 28-166 (303)
281 1xky_A Dihydrodipicolinate syn 96.6 0.12 4E-06 45.5 16.4 123 28-194 36-166 (301)
282 2ehh_A DHDPS, dihydrodipicolin 96.5 0.14 4.9E-06 44.7 16.7 120 28-191 24-151 (294)
283 2qr6_A IMP dehydrogenase/GMP r 96.5 0.014 4.7E-07 53.2 10.4 99 76-203 142-240 (393)
284 4aaj_A N-(5'-phosphoribosyl)an 96.5 0.058 2E-06 45.6 13.3 148 11-214 52-218 (228)
285 3ih1_A Methylisocitrate lyase; 96.5 0.029 9.9E-07 49.6 11.7 148 26-217 105-263 (305)
286 1o5k_A DHDPS, dihydrodipicolin 96.5 0.12 4.3E-06 45.4 15.8 121 27-191 35-163 (306)
287 3m47_A Orotidine 5'-phosphate 96.4 0.045 1.5E-06 46.2 12.4 135 19-213 75-213 (228)
288 3qze_A DHDPS, dihydrodipicolin 96.4 0.15 5E-06 45.1 16.3 149 14-216 40-196 (314)
289 3l21_A DHDPS, dihydrodipicolin 96.4 0.15 5.3E-06 44.7 16.2 149 14-216 32-188 (304)
290 3flu_A DHDPS, dihydrodipicolin 96.4 0.092 3.1E-06 46.0 14.7 130 14-194 24-161 (297)
291 2jbm_A Nicotinate-nucleotide p 96.4 0.017 5.8E-07 51.0 9.9 110 61-207 161-277 (299)
292 3tak_A DHDPS, dihydrodipicolin 96.4 0.078 2.7E-06 46.3 14.2 129 14-193 18-154 (291)
293 1f6k_A N-acetylneuraminate lya 96.4 0.18 6.1E-06 44.0 16.5 149 15-217 21-178 (293)
294 3cpr_A Dihydrodipicolinate syn 96.4 0.15 5.2E-06 44.7 16.0 128 15-193 34-169 (304)
295 3tha_A Tryptophan synthase alp 96.4 0.097 3.3E-06 44.9 14.3 44 162-207 188-232 (252)
296 3m5v_A DHDPS, dihydrodipicolin 96.4 0.15 5.1E-06 44.7 15.9 143 27-216 30-182 (301)
297 2rfg_A Dihydrodipicolinate syn 96.4 0.12 4.2E-06 45.2 15.1 143 28-217 24-174 (297)
298 3na8_A Putative dihydrodipicol 96.4 0.16 5.6E-06 44.8 16.0 149 15-217 42-199 (315)
299 2v9d_A YAGE; dihydrodipicolini 96.4 0.16 5.4E-06 45.5 16.0 120 28-191 55-182 (343)
300 2ojp_A DHDPS, dihydrodipicolin 96.3 0.11 3.9E-06 45.3 14.6 150 14-217 18-175 (292)
301 3lab_A Putative KDPG (2-keto-3 96.3 0.014 4.9E-07 49.1 8.3 81 112-217 23-104 (217)
302 3si9_A DHDPS, dihydrodipicolin 96.3 0.093 3.2E-06 46.4 14.1 121 28-192 46-174 (315)
303 3b4u_A Dihydrodipicolinate syn 96.3 0.25 8.4E-06 43.2 16.7 130 14-194 20-162 (294)
304 3daq_A DHDPS, dihydrodipicolin 96.3 0.1 3.5E-06 45.5 14.2 146 26-218 24-177 (292)
305 1o4u_A Type II quinolic acid p 96.2 0.0095 3.2E-07 52.2 6.8 113 60-209 156-275 (285)
306 4eiv_A Deoxyribose-phosphate a 96.2 0.25 8.5E-06 43.3 15.6 127 28-192 103-252 (297)
307 1qpo_A Quinolinate acid phosph 96.1 0.04 1.4E-06 48.2 10.7 113 60-209 158-276 (284)
308 3ceu_A Thiamine phosphate pyro 96.1 0.0062 2.1E-07 50.7 5.1 47 162-209 131-179 (210)
309 4adt_A Pyridoxine biosynthetic 96.1 0.01 3.4E-07 52.4 6.6 47 163-210 197-246 (297)
310 3d0c_A Dihydrodipicolinate syn 96.1 0.17 5.8E-06 44.7 14.7 120 29-193 37-160 (314)
311 1pii_A N-(5'phosphoribosyl)ant 96.0 0.075 2.6E-06 49.5 12.6 123 33-216 125-250 (452)
312 3c2e_A Nicotinate-nucleotide p 96.0 0.012 4E-07 51.8 6.8 113 60-209 162-284 (294)
313 4e38_A Keto-hydroxyglutarate-a 96.0 0.031 1E-06 47.5 9.2 83 113-220 45-129 (232)
314 3a5f_A Dihydrodipicolinate syn 96.0 0.12 4E-06 45.2 13.0 122 27-192 24-153 (291)
315 4h3d_A 3-dehydroquinate dehydr 96.0 0.17 5.7E-06 43.5 13.7 96 14-140 25-120 (258)
316 2zbt_A Pyridoxal biosynthesis 96.0 0.0095 3.2E-07 52.1 5.9 46 163-209 197-247 (297)
317 3eb2_A Putative dihydrodipicol 95.9 0.082 2.8E-06 46.4 11.7 128 14-192 21-156 (300)
318 3h5d_A DHDPS, dihydrodipicolin 95.9 0.28 9.5E-06 43.2 15.2 149 14-217 24-181 (311)
319 3fkr_A L-2-keto-3-deoxyarabona 95.9 0.17 6E-06 44.5 13.7 124 28-192 32-162 (309)
320 1sfl_A 3-dehydroquinate dehydr 95.8 0.12 4.1E-06 43.8 12.0 145 28-212 20-172 (238)
321 2yyu_A Orotidine 5'-phosphate 95.8 0.15 5.3E-06 43.2 12.6 46 165-211 167-224 (246)
322 1vkf_A Glycerol uptake operon 95.8 0.038 1.3E-06 45.4 8.2 36 172-209 148-184 (188)
323 2r91_A 2-keto-3-deoxy-(6-phosp 95.7 0.29 9.7E-06 42.5 14.1 117 27-189 21-145 (286)
324 3s5o_A 4-hydroxy-2-oxoglutarat 95.6 0.18 6.3E-06 44.3 12.8 125 28-194 38-170 (307)
325 3iv3_A Tagatose 1,6-diphosphat 95.6 0.58 2E-05 41.7 15.9 154 30-209 115-287 (332)
326 3ru6_A Orotidine 5'-phosphate 95.6 0.15 5E-06 45.0 11.8 70 114-211 158-239 (303)
327 1vqt_A Orotidine 5'-phosphate 95.6 0.12 4.1E-06 43.1 10.8 66 114-211 126-201 (213)
328 3e96_A Dihydrodipicolinate syn 95.6 0.31 1E-05 43.0 14.1 148 15-217 30-181 (316)
329 3q94_A Fructose-bisphosphate a 95.5 0.74 2.5E-05 40.2 16.2 138 30-205 95-239 (288)
330 3tr2_A Orotidine 5'-phosphate 95.5 0.55 1.9E-05 39.8 15.0 71 113-211 143-225 (239)
331 3qfe_A Putative dihydrodipicol 95.5 0.24 8.2E-06 43.8 13.2 124 27-192 34-166 (318)
332 4e38_A Keto-hydroxyglutarate-a 95.5 0.14 4.7E-06 43.4 11.1 48 162-211 162-210 (232)
333 3dz1_A Dihydrodipicolinate syn 95.5 0.6 2E-05 41.1 15.8 128 14-193 25-161 (313)
334 1m5w_A Pyridoxal phosphate bio 95.5 0.04 1.4E-06 46.8 7.6 42 170-211 183-224 (243)
335 2yr1_A 3-dehydroquinate dehydr 95.4 0.48 1.6E-05 40.6 14.5 153 14-212 25-186 (257)
336 2nuw_A 2-keto-3-deoxygluconate 95.4 0.27 9.2E-06 42.8 13.0 124 14-190 16-147 (288)
337 3tfx_A Orotidine 5'-phosphate 95.4 0.72 2.5E-05 39.6 15.4 137 19-211 67-225 (259)
338 3eoo_A Methylisocitrate lyase; 95.4 0.19 6.4E-06 44.2 11.8 138 26-206 99-243 (298)
339 1dbt_A Orotidine 5'-phosphate 95.3 0.094 3.2E-06 44.4 9.5 45 166-211 167-223 (239)
340 2al1_A Enolase 1, 2-phospho-D- 95.3 0.13 4.6E-06 47.5 11.2 68 112-201 274-344 (436)
341 3ih1_A Methylisocitrate lyase; 95.3 1.3 4.5E-05 38.9 17.1 160 28-220 39-211 (305)
342 1w3i_A EDA, 2-keto-3-deoxy glu 95.3 0.32 1.1E-05 42.4 13.2 123 14-189 16-146 (293)
343 3o1n_A 3-dehydroquinate dehydr 95.3 0.38 1.3E-05 41.7 13.4 149 14-211 45-205 (276)
344 2p10_A MLL9387 protein; putati 95.2 0.3 1E-05 42.5 12.4 142 32-209 115-266 (286)
345 3khj_A Inosine-5-monophosphate 95.2 0.21 7.2E-06 45.0 12.0 92 77-202 82-173 (361)
346 4dbe_A Orotidine 5'-phosphate 95.2 0.039 1.3E-06 46.5 6.5 69 117-210 125-195 (222)
347 1gvf_A Tagatose-bisphosphate a 95.1 1.1 3.6E-05 39.2 15.8 137 30-204 89-234 (286)
348 2akz_A Gamma enolase, neural; 95.1 0.18 6.2E-06 46.7 11.6 68 112-201 271-341 (439)
349 2v82_A 2-dehydro-3-deoxy-6-pho 95.0 0.2 6.7E-06 41.2 10.5 80 112-216 17-98 (212)
350 3b8i_A PA4872 oxaloacetate dec 95.0 0.55 1.9E-05 41.0 13.6 149 25-217 97-251 (287)
351 1y0e_A Putative N-acetylmannos 95.0 0.46 1.6E-05 39.1 12.6 121 26-203 24-147 (223)
352 3gk0_A PNP synthase, pyridoxin 94.9 0.065 2.2E-06 46.3 7.2 41 171-211 212-252 (278)
353 1hg3_A Triosephosphate isomera 94.8 1 3.4E-05 37.9 14.4 54 163-216 165-219 (225)
354 3jr2_A Hexulose-6-phosphate sy 94.8 0.62 2.1E-05 38.5 13.1 95 75-202 43-139 (218)
355 2ptz_A Enolase; lyase, glycoly 94.7 0.13 4.5E-06 47.5 9.4 100 78-201 224-345 (432)
356 1vc4_A Indole-3-glycerol phosp 94.7 0.27 9.3E-06 42.0 10.8 79 116-216 67-147 (254)
357 1zlp_A PSR132, petal death pro 94.6 0.53 1.8E-05 41.7 12.5 138 26-206 117-261 (318)
358 3lye_A Oxaloacetate acetyl hyd 94.5 0.26 8.8E-06 43.5 10.4 138 26-206 104-251 (307)
359 3r2g_A Inosine 5'-monophosphat 94.5 0.18 6.2E-06 45.5 9.5 70 114-202 99-169 (361)
360 3ldv_A Orotidine 5'-phosphate 94.4 0.81 2.8E-05 39.2 13.1 71 114-212 162-244 (255)
361 1w0m_A TIM, triosephosphate is 94.4 1.4 4.9E-05 36.9 14.4 51 166-216 165-216 (226)
362 3paj_A Nicotinate-nucleotide p 94.3 0.4 1.4E-05 42.5 11.2 104 60-204 195-305 (320)
363 3o07_A Pyridoxine biosynthesis 94.3 0.12 4.3E-06 44.9 7.6 120 28-201 21-141 (291)
364 3elf_A Fructose-bisphosphate a 94.2 1.6 5.4E-05 39.1 15.0 149 20-202 106-276 (349)
365 3iwp_A Copper homeostasis prot 94.2 0.28 9.7E-06 42.8 9.7 81 28-139 49-130 (287)
366 2isw_A Putative fructose-1,6-b 94.1 2.3 7.8E-05 37.7 15.6 130 31-194 91-248 (323)
367 1rvg_A Fructose-1,6-bisphospha 94.1 2.9 9.8E-05 36.7 17.1 118 29-181 86-210 (305)
368 3n9r_A Fructose-bisphosphate a 93.9 3.1 0.00011 36.6 17.0 130 30-194 89-248 (307)
369 3fa4_A 2,3-dimethylmalate lyas 93.9 0.72 2.5E-05 40.5 11.9 138 26-206 96-243 (302)
370 2hjp_A Phosphonopyruvate hydro 93.9 2.8 9.7E-05 36.4 15.7 138 25-206 90-239 (290)
371 3qw3_A Orotidine-5-phosphate d 93.9 0.47 1.6E-05 40.7 10.5 138 18-211 86-237 (255)
372 4a29_A Engineered retro-aldol 93.9 0.29 9.8E-06 42.1 8.9 54 165-219 194-250 (258)
373 3l0g_A Nicotinate-nucleotide p 93.8 0.66 2.3E-05 40.7 11.4 107 60-205 171-282 (300)
374 2hmc_A AGR_L_411P, dihydrodipi 93.8 0.85 2.9E-05 40.7 12.5 127 15-194 44-179 (344)
375 1o66_A 3-methyl-2-oxobutanoate 93.8 0.49 1.7E-05 41.0 10.4 103 25-181 95-204 (275)
376 1wa3_A 2-keto-3-deoxy-6-phosph 93.6 0.29 1E-05 39.8 8.4 71 112-205 20-92 (205)
377 4dpp_A DHDPS 2, dihydrodipicol 93.4 1.4 4.6E-05 39.7 13.1 89 15-145 77-166 (360)
378 2uv8_G Fatty acid synthase sub 93.4 0.39 1.3E-05 52.3 11.0 56 163-219 752-825 (2051)
379 2nx9_A Oxaloacetate decarboxyl 93.4 4.5 0.00015 37.6 17.0 138 24-213 102-248 (464)
380 3zen_D Fatty acid synthase; tr 93.4 0.15 5E-06 57.6 7.9 52 166-218 599-668 (3089)
381 3ve9_A Orotidine-5'-phosphate 93.2 0.13 4.5E-06 43.0 5.7 74 114-212 115-190 (215)
382 1nsj_A PRAI, phosphoribosyl an 93.2 0.67 2.3E-05 38.3 10.0 44 172-215 150-198 (205)
383 3qja_A IGPS, indole-3-glycerol 93.0 0.5 1.7E-05 40.9 9.2 77 116-212 74-152 (272)
384 2ftp_A Hydroxymethylglutaryl-C 92.7 1.1 3.8E-05 39.0 11.3 144 29-202 87-235 (302)
385 3vkj_A Isopentenyl-diphosphate 92.7 0.43 1.5E-05 43.1 8.8 40 161-201 175-217 (368)
386 1ydn_A Hydroxymethylglutaryl-C 92.5 2 6.8E-05 37.1 12.6 144 29-202 83-231 (295)
387 1yxy_A Putative N-acetylmannos 92.5 1.6 5.3E-05 36.2 11.5 116 28-199 39-157 (234)
388 1m3u_A 3-methyl-2-oxobutanoate 92.4 0.48 1.6E-05 40.9 8.2 103 25-181 94-204 (264)
389 3tsm_A IGPS, indole-3-glycerol 92.3 0.55 1.9E-05 40.7 8.5 74 117-210 82-157 (272)
390 1vhc_A Putative KHG/KDPG aldol 92.3 0.73 2.5E-05 38.6 9.1 80 113-217 28-108 (224)
391 3tqv_A Nicotinate-nucleotide p 92.3 0.83 2.8E-05 39.8 9.7 87 79-206 186-274 (287)
392 3ble_A Citramalate synthase fr 92.3 1.9 6.7E-05 38.2 12.4 139 30-202 101-245 (337)
393 1nvm_A HOA, 4-hydroxy-2-oxoval 92.2 2.4 8.1E-05 37.7 12.9 132 29-211 97-239 (345)
394 3gnn_A Nicotinate-nucleotide p 92.1 0.89 3E-05 39.9 9.7 86 79-205 197-284 (298)
395 3q58_A N-acetylmannosamine-6-p 92.1 1.5 5E-05 36.8 10.8 79 112-217 34-127 (229)
396 1wbh_A KHG/KDPG aldolase; lyas 92.0 0.57 1.9E-05 38.9 8.1 79 113-216 27-106 (214)
397 1s2w_A Phosphoenolpyruvate pho 91.8 4.6 0.00016 35.2 14.0 140 26-206 95-242 (295)
398 4fo4_A Inosine 5'-monophosphat 91.8 0.59 2E-05 42.2 8.5 67 117-202 110-177 (366)
399 2ze3_A DFA0005; organic waste 91.8 5.8 0.0002 34.2 14.7 135 25-206 92-236 (275)
400 3igs_A N-acetylmannosamine-6-p 91.7 0.59 2E-05 39.3 7.9 79 112-217 34-127 (232)
401 1vli_A Spore coat polysacchari 91.7 1.6 5.6E-05 39.6 11.3 133 29-201 48-191 (385)
402 4af0_A Inosine-5'-monophosphat 91.6 0.57 2E-05 44.4 8.4 70 114-203 280-351 (556)
403 2ze3_A DFA0005; organic waste 91.6 5.5 0.00019 34.3 14.1 156 29-219 27-203 (275)
404 4avf_A Inosine-5'-monophosphat 91.5 0.61 2.1E-05 43.7 8.5 68 116-202 230-298 (490)
405 1rqb_A Transcarboxylase 5S sub 91.4 9.7 0.00033 36.0 17.0 139 24-214 119-268 (539)
406 1eix_A Orotidine 5'-monophosph 91.4 0.21 7.2E-06 42.4 4.8 47 165-212 173-231 (245)
407 1oy0_A Ketopantoate hydroxymet 91.0 0.9 3.1E-05 39.5 8.5 45 113-181 178-222 (281)
408 2nli_A Lactate oxidase; flavoe 90.9 2.4 8.1E-05 38.1 11.6 39 162-201 218-256 (368)
409 3ajx_A 3-hexulose-6-phosphate 90.9 5.4 0.00018 32.0 13.4 89 79-202 41-134 (207)
410 3lab_A Putative KDPG (2-keto-3 90.8 0.42 1.4E-05 40.1 6.0 49 162-212 147-196 (217)
411 1gox_A (S)-2-hydroxy-acid oxid 90.8 3.1 0.00011 37.3 12.2 40 162-202 214-253 (370)
412 3sgz_A Hydroxyacid oxidase 2; 90.7 2.9 0.0001 37.4 11.9 40 161-201 205-244 (352)
413 3vav_A 3-methyl-2-oxobutanoate 90.7 7.5 0.00026 33.5 15.1 105 12-141 13-127 (275)
414 2cw6_A Hydroxymethylglutaryl-C 90.7 3.6 0.00012 35.6 12.2 142 30-201 85-231 (298)
415 3f4w_A Putative hexulose 6 pho 90.6 5.7 0.0002 32.0 15.4 106 77-217 39-155 (211)
416 3ffs_A Inosine-5-monophosphate 90.6 0.6 2.1E-05 42.7 7.3 67 117-202 146-212 (400)
417 4fxs_A Inosine-5'-monophosphat 90.6 0.87 3E-05 42.7 8.7 67 117-202 233-300 (496)
418 3no5_A Uncharacterized protein 90.6 0.44 1.5E-05 41.3 6.1 50 24-91 29-78 (275)
419 4gfi_A Mandelate racemase/muco 90.3 0.44 1.5E-05 42.0 6.1 105 34-201 141-247 (329)
420 2wqp_A Polysialic acid capsule 90.2 2.1 7E-05 38.4 10.3 132 28-201 38-180 (349)
421 2fiq_A Putative tagatose 6-pho 90.2 3.5 0.00012 37.8 12.0 149 29-205 108-284 (420)
422 3ivs_A Homocitrate synthase, m 90.2 5.1 0.00017 36.7 13.2 136 30-202 115-255 (423)
423 3pm6_A Putative fructose-bisph 89.9 9.5 0.00033 33.4 14.4 130 38-205 113-254 (306)
424 1geq_A Tryptophan synthase alp 89.8 3.2 0.00011 34.5 10.9 127 25-199 19-160 (248)
425 3bg3_A Pyruvate carboxylase, m 89.7 16 0.00055 35.8 17.9 138 33-213 205-352 (718)
426 1ydo_A HMG-COA lyase; TIM-barr 89.6 4.5 0.00015 35.3 12.0 143 30-202 86-233 (307)
427 1ep3_A Dihydroorotate dehydrog 89.6 5 0.00017 34.4 12.3 104 77-201 84-195 (311)
428 2qiw_A PEP phosphonomutase; st 89.5 9 0.00031 32.6 14.4 154 29-220 31-204 (255)
429 1qop_A Tryptophan synthase alp 89.5 3.8 0.00013 34.9 11.2 97 113-217 30-145 (268)
430 4ef8_A Dihydroorotate dehydrog 89.4 3.9 0.00013 36.6 11.6 147 30-201 63-227 (354)
431 1ypf_A GMP reductase; GUAC, pu 89.4 1.6 5.3E-05 38.7 8.9 68 117-201 108-176 (336)
432 1vrd_A Inosine-5'-monophosphat 89.2 1.4 4.8E-05 40.9 8.9 68 116-202 238-306 (494)
433 1mxs_A KDPG aldolase; 2-keto-3 89.2 1.2 4.1E-05 37.2 7.7 79 113-216 37-116 (225)
434 2qiw_A PEP phosphonomutase; st 89.2 5.4 0.00019 33.9 11.9 134 28-204 96-238 (255)
435 2ztj_A Homocitrate synthase; ( 89.2 12 0.00041 33.6 15.7 136 31-202 80-221 (382)
436 2c6q_A GMP reductase 2; TIM ba 89.1 1.7 5.9E-05 38.8 9.1 42 160-202 147-189 (351)
437 3b8i_A PA4872 oxaloacetate dec 89.1 11 0.00036 32.8 15.4 158 29-220 32-204 (287)
438 3qw4_B UMP synthase; N-termina 89.0 0.93 3.2E-05 42.1 7.4 139 18-211 87-238 (453)
439 3eoo_A Methylisocitrate lyase; 88.6 12 0.0004 32.7 15.6 159 28-219 32-206 (298)
440 3chv_A Prokaryotic domain of u 88.6 0.76 2.6E-05 40.0 6.1 50 24-91 33-82 (284)
441 2hjp_A Phosphonopyruvate hydro 88.5 9.2 0.00032 33.2 13.0 160 29-220 26-203 (290)
442 1aj0_A DHPS, dihydropteroate s 88.4 3.8 0.00013 35.5 10.5 109 94-217 18-131 (282)
443 1xg4_A Probable methylisocitra 88.3 12 0.00041 32.5 16.0 159 29-219 28-202 (295)
444 3noy_A 4-hydroxy-3-methylbut-2 88.1 7.2 0.00025 34.9 12.1 82 112-215 44-125 (366)
445 3nvt_A 3-deoxy-D-arabino-heptu 88.0 15 0.00051 33.2 15.1 146 24-201 155-345 (385)
446 1eep_A Inosine 5'-monophosphat 88.0 1.7 6E-05 39.3 8.4 67 117-202 155-222 (404)
447 1tqj_A Ribulose-phosphate 3-ep 87.8 0.7 2.4E-05 38.7 5.3 123 26-202 18-141 (230)
448 3vav_A 3-methyl-2-oxobutanoate 87.7 2 6.9E-05 37.1 8.2 103 25-181 106-216 (275)
449 1zlp_A PSR132, petal death pro 87.5 14 0.00049 32.4 16.1 162 29-220 50-225 (318)
450 1jcn_A Inosine monophosphate d 87.3 2 6.9E-05 40.1 8.7 68 116-202 256-324 (514)
451 3qtp_A Enolase 1; glycolysis, 87.3 5 0.00017 37.0 11.0 71 112-204 280-354 (441)
452 2e6f_A Dihydroorotate dehydrog 87.2 6.8 0.00023 33.8 11.5 88 93-201 95-194 (314)
453 2bdq_A Copper homeostasis prot 87.1 4.8 0.00016 33.7 9.9 136 15-202 70-207 (224)
454 3fok_A Uncharacterized protein 87.1 6.8 0.00023 34.3 11.2 74 112-211 198-284 (307)
455 2ekc_A AQ_1548, tryptophan syn 86.9 10 0.00035 32.1 12.3 83 112-202 29-129 (262)
456 2nzl_A Hydroxyacid oxidase 1; 86.9 5.7 0.0002 35.9 11.2 39 162-201 241-279 (392)
457 3rmj_A 2-isopropylmalate synth 86.8 15 0.00052 32.8 13.9 130 35-201 97-235 (370)
458 1o66_A 3-methyl-2-oxobutanoate 86.8 14 0.00049 31.7 15.5 103 15-141 4-116 (275)
459 3sr7_A Isopentenyl-diphosphate 86.7 2.9 9.9E-05 37.6 9.0 40 161-201 194-236 (365)
460 1ynp_A Oxidoreductase, AKR11C1 86.7 15 0.00051 31.8 14.2 139 25-201 48-190 (317)
461 3krs_A Triosephosphate isomera 86.7 1.5 5E-05 38.0 6.7 43 173-216 226-268 (271)
462 1v5x_A PRA isomerase, phosphor 86.7 5.7 0.00019 32.6 10.1 128 12-205 34-177 (203)
463 4eiv_A Deoxyribose-phosphate a 86.3 2.4 8.1E-05 37.0 7.8 79 28-138 169-263 (297)
464 1jub_A Dihydroorotate dehydrog 86.3 12 0.00041 32.2 12.6 88 93-201 95-191 (311)
465 1rpx_A Protein (ribulose-phosp 85.8 1.3 4.4E-05 36.7 5.8 119 26-199 24-144 (230)
466 1o5x_A TIM, triosephosphate is 85.6 1.5 5.1E-05 37.4 6.2 43 173-216 203-245 (248)
467 1zfj_A Inosine monophosphate d 85.6 2.1 7.3E-05 39.6 7.8 66 117-202 235-302 (491)
468 1s2w_A Phosphoenolpyruvate pho 85.5 17 0.0006 31.4 13.3 160 28-218 29-205 (295)
469 1h1y_A D-ribulose-5-phosphate 85.4 2.4 8.1E-05 35.1 7.3 120 26-201 20-144 (228)
470 3qst_A Triosephosphate isomera 85.3 1.8 6E-05 37.1 6.5 43 173-216 207-249 (255)
471 3ewb_X 2-isopropylmalate synth 85.3 17 0.00059 31.3 14.8 131 35-202 90-229 (293)
472 2j27_A Triosephosphate isomera 85.2 1.9 6.5E-05 36.8 6.6 43 173-216 205-247 (250)
473 1oy0_A Ketopantoate hydroxymet 85.1 18 0.00061 31.3 15.7 104 13-141 19-134 (281)
474 3qm3_A Fructose-bisphosphate a 85.1 21 0.00071 31.9 18.1 154 19-203 116-288 (357)
475 2yc6_A Triosephosphate isomera 85.0 2.2 7.7E-05 36.5 7.0 42 173-216 208-249 (257)
476 1l6s_A Porphobilinogen synthas 84.8 20 0.00067 31.5 13.6 166 26-220 59-263 (323)
477 2a4a_A Deoxyribose-phosphate a 84.7 3.8 0.00013 35.5 8.4 80 27-138 174-257 (281)
478 3vnd_A TSA, tryptophan synthas 84.6 11 0.00038 32.2 11.3 97 112-216 30-145 (267)
479 3usb_A Inosine-5'-monophosphat 84.4 3.1 0.00011 39.1 8.3 67 116-202 257-325 (511)
480 1mzh_A Deoxyribose-phosphate a 84.2 1.9 6.4E-05 35.9 6.1 50 26-100 133-182 (225)
481 4ay7_A Methylcobalamin\: coenz 84.2 7.4 0.00025 34.2 10.4 57 20-91 185-241 (348)
482 2qf7_A Pyruvate carboxylase pr 84.2 29 0.001 35.8 16.1 139 32-213 652-799 (1165)
483 1gte_A Dihydropyrimidine dehyd 84.0 11 0.00037 38.3 12.8 106 80-201 623-734 (1025)
484 3fa4_A 2,3-dimethylmalate lyas 84.0 21 0.00072 31.1 13.5 159 28-218 28-204 (302)
485 1a0c_A Xylose isomerase; ketol 83.9 16 0.00056 33.4 12.8 58 20-92 75-132 (438)
486 3ngj_A Deoxyribose-phosphate a 83.8 5.6 0.00019 33.6 8.9 48 27-100 159-207 (239)
487 1p0k_A Isopentenyl-diphosphate 83.7 4.2 0.00014 35.9 8.6 41 161-202 166-209 (349)
488 2fli_A Ribulose-phosphate 3-ep 83.5 1.2 4.2E-05 36.3 4.6 118 26-200 17-136 (220)
489 2yw3_A 4-hydroxy-2-oxoglutarat 83.4 3.8 0.00013 33.6 7.6 76 114-216 25-101 (207)
490 1rd5_A Tryptophan synthase alp 83.4 12 0.00041 31.4 11.0 82 113-202 31-125 (262)
491 2jgq_A Triosephosphate isomera 82.8 2.1 7.1E-05 36.1 5.8 53 162-215 175-229 (233)
492 3b3d_A YTBE protein, putative 81.9 21 0.00071 30.9 12.2 125 28-197 68-196 (314)
493 3g8r_A Probable spore coat pol 81.8 22 0.00076 31.6 12.4 124 35-200 31-166 (350)
494 3ndo_A Deoxyribose-phosphate a 81.8 5.6 0.00019 33.4 8.1 52 25-100 146-197 (231)
495 1vcv_A Probable deoxyribose-ph 81.8 8.9 0.0003 32.0 9.3 80 27-127 130-209 (226)
496 2vxn_A Triosephosphate isomera 81.7 3.2 0.00011 35.4 6.6 43 173-216 206-248 (251)
497 2v5b_A Triosephosphate isomera 81.5 4.1 0.00014 34.5 7.2 43 173-216 199-241 (244)
498 3r12_A Deoxyribose-phosphate a 81.4 5.6 0.00019 34.0 8.1 47 28-100 176-223 (260)
499 1kbi_A Cytochrome B2, L-LCR; f 81.4 11 0.00039 35.2 10.9 39 162-201 332-370 (511)
500 3hbl_A Pyruvate carboxylase; T 81.3 34 0.0012 35.3 15.2 139 31-212 633-781 (1150)
No 1
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=100.00 E-value=6.7e-65 Score=466.04 Aligned_cols=223 Identities=39% Similarity=0.678 Sum_probs=196.3
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHH
Q 025135 9 YPNPQALQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVA 88 (257)
Q Consensus 9 ~~~p~~lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~ 88 (257)
+.+||+||.+||+++|++|++||+||++|||||||||+||||||+|||||.+|+|||+||||+|||+||++|||++||++
T Consensus 136 ~~~pr~mt~~eI~~ii~~F~~AA~rA~~AGFDgVEIH~ahGYLl~QFLSp~tN~RtDeYGGS~eNR~Rf~~Eii~avr~~ 215 (358)
T 4a3u_A 136 YDVARALRLDEIPRLLDDYEKAARHALKAGFDGVQIHAANGYLIDEFIRDSTNHRHDEYGGAVENRIRLLKDVTERVIAT 215 (358)
T ss_dssp CCEEEECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHSTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHH
T ss_pred CccCccCCHHHHHHHHHHHHHHHHHHHHcCCCeEeecccCCCcHHhceecccCCeeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCeEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHH
Q 025135 89 IGADRVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTW 168 (257)
Q Consensus 89 vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 168 (257)
||+++|+||||+.+.+.++...++.+....+++.+++.| +++++++.+.+..... ......+...+
T Consensus 216 vg~~~v~vRls~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~i~~~~~~~~~~~~--------~~~~~~~a~~i 281 (358)
T 4a3u_A 216 IGKERTAVRLSPNGEIQGTVDSHPEQVFIPAAKMLSDLD------IAFLGMREGAVDGTFG--------KTDQPKLSPEI 281 (358)
T ss_dssp HCGGGEEEEECCSSCBTTBCCSSTHHHHHHHHHHHHHHT------CSEEEEECCBTTCSSS--------BCSSCCCHHHH
T ss_pred cCccceEEEeccCcccCCCcccchHHHHHHHHHhhhccC------ccccccccccccCccc--------ccccHHHHHHH
Confidence 999889999998766655555556777888999999999 9999998876543221 11112345668
Q ss_pred HHHhCCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCchHHHHHHcCCCCCCccccccccCCCCCCcccccCCcc
Q 025135 169 RRSYQGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNPDLVLRFKLNAPLNKYVRKTFYTHDPIVGYTDYPFLSK 246 (257)
Q Consensus 169 r~~~~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 246 (257)
|+.++.||+++|..+++.|+++|++|.||+|+|||++|+||+||+|+++|.|||++++.+||+.++ +||+|||++++
T Consensus 282 k~~~~~~v~~~g~~~~~~ae~~l~~G~aD~V~~gR~~ladPdlp~k~~~g~pl~~~~~~t~y~~~~-~GY~dyp~~~e 358 (358)
T 4a3u_A 282 RKVFKPPLVLNQDYTFETAQAALDSGVADAISFGRPFIGNPDLPRRFFEKAPLTKDVIETWYTQTP-KGYTDYPLLGD 358 (358)
T ss_dssp HHHCCSCEEEESSCCHHHHHHHHHHTSCSEEEESHHHHHCTTHHHHHHHTCCCCCCCGGGSSCSSS-TTTTCSCCC--
T ss_pred HHhcCCcEEEeCCCCHHHHHHHHHcCCceEeHhhHHHHhChhHHHHHHhCCCCCCCchhcCCCCCC-CCcCCCCCCCC
Confidence 888888888877779999999999999999999999999999999999999999999999999765 99999999864
No 2
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=100.00 E-value=4.5e-63 Score=459.95 Aligned_cols=233 Identities=40% Similarity=0.615 Sum_probs=193.3
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHH
Q 025135 9 YPNPQALQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVA 88 (257)
Q Consensus 9 ~~~p~~lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~ 88 (257)
+.+|++||.+||++||++|++||+||++|||||||||+||||||+|||||.+|+|||+||||+|||+||++|||++||++
T Consensus 156 ~~~pr~mt~~eI~~ii~~F~~AA~rA~~AGFDgVEIH~AhGYLl~QFLSp~tN~RtDeYGGS~ENR~Rf~lEVi~aVr~~ 235 (400)
T 4gbu_A 156 NNPQHSLTKDEIKQYIKEYVQAAKNSIAAGADGVEIHSANGYLLNQFLDPHSNTRTDEYGGSIENRARFTLEVVDALVEA 235 (400)
T ss_dssp TCCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHH
T ss_pred CCCCccCCHHHHHHHHHHHHHHHHHHHhcCcCeeeecccccchHHheecCcCCCCccccCCcHHHHHHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCeEEEEEccCCCCCCCC---CCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHH
Q 025135 89 IGADRVGVRMSPAIDHLDAT---DSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLL 165 (257)
Q Consensus 89 vg~~~v~vrls~~~~~~~~~---~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (257)
||+++|+||||+.+.++++. .....++..++++.|+..+ ..+..++++++..+........... ........
T Consensus 236 vg~d~vgvRlS~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 310 (400)
T 4gbu_A 236 IGHEKVGLRLSPYGVFNSMSGGAETGIVAQYAYVAGELEKRA-KAGKRLAFVHLVEPRVTNPFLTEGE----GEYEGGSN 310 (400)
T ss_dssp HCGGGEEEEECTTCCTTTCCGGGSTTHHHHHHHHHHHHHHHH-HTTCCCSEEEEECTTCSSTTSCTTT----TCCCSCCS
T ss_pred cCCCcEEEEeccccccCCCCccchhhhHHHHHHHHHHHHHhh-ccCccccceeeecccCCCccccccc----chhhhHHH
Confidence 99889999999875554432 2334667778888887764 2334578899887765443211100 00011123
Q ss_pred HHHHHHhCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCchHHHHHHcCCCCCCccccccccCCCCCCcccccCC
Q 025135 166 RTWRRSYQGTFICSGGF-TRELGIQALAEDGADLVAYGRLFISNPDLVLRFKLNAPLNKYVRKTFYTHDPIVGYTDYPFL 244 (257)
Q Consensus 166 ~~ir~~~~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~ 244 (257)
..+|+.+++|||++|++ +..++.+.+.++.+|+|+|||++|+|||||+|+++|.|||++|+.+||+.++ +||+|||++
T Consensus 311 ~~ir~~~~~pvi~~G~~~~~~~~~~~~~~~~aDlV~~gR~~iadPdl~~k~~~G~pl~~~d~~tfy~~~~-~Gytdyp~~ 389 (400)
T 4gbu_A 311 DFVYSIWKGPVIRAGNFALHPEVVREEVKDKRTLIGYGRFFISNPDLVDRLEKGLPLNKYDRDTFYQMSA-HGYIDYPTY 389 (400)
T ss_dssp THHHHHCCSCEEEESSCTTCHHHHHHHTTSTTEEEECCHHHHHCTTHHHHHHHTCCCBCCCGGGSSCSSS-TTTTCCCCH
T ss_pred HHHHHHhCCCEEEeCCCCChHHHHHHHHcCCCeEhHHHHHHHHCcHHHHHHHcCCCCCCCChhhcCCCCC-CCcCCCcch
Confidence 44788999999999999 5677777777788999999999999999999999999999999999999764 999999998
Q ss_pred ccc
Q 025135 245 SKA 247 (257)
Q Consensus 245 ~~~ 247 (257)
.+.
T Consensus 390 ~e~ 392 (400)
T 4gbu_A 390 EEA 392 (400)
T ss_dssp HHH
T ss_pred HHH
Confidence 754
No 3
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=100.00 E-value=1.3e-61 Score=449.80 Aligned_cols=247 Identities=73% Similarity=1.229 Sum_probs=201.7
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHH
Q 025135 9 YPNPQALQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVA 88 (257)
Q Consensus 9 ~~~p~~lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~ 88 (257)
+..|++||.+||++++++|++||++|++|||||||||+||||||+|||||.+|+|+|+||||+|||+||++|||++||++
T Consensus 155 ~~~p~~mt~~eI~~ii~~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~a 234 (402)
T 2hsa_B 155 YPKPRAIGTYEISQVVEDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSA 234 (402)
T ss_dssp CCCCEECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHH
Confidence 36799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCeEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCch-hHHHHHHH
Q 025135 89 IGADRVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTED-EEAQLLRT 167 (257)
Q Consensus 89 vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 167 (257)
+|+++|+||||+.+.+.+..++++.+++.++++.|++.|.+.|..+|||+++.+.+........... ..+ ..+.+++.
T Consensus 235 vg~~~V~vRls~~~~~~g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 313 (402)
T 2hsa_B 235 IGADRVGVRVSPAIDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRL-GSEEEEARLMRT 313 (402)
T ss_dssp HCGGGEEEEECSSCCSTTCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTT-THHHHHHHHHHH
T ss_pred hCCCcEEEEeccccccCCCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccc-cCCcchHHHHHH
Confidence 9977999999986555444444678889999999999984444557999999876533100000000 011 23567788
Q ss_pred HHHHhCCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCchHHHHHHcCCCCCCccccccccCCCCCCcccccCCccc
Q 025135 168 WRRSYQGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNPDLVLRFKLNAPLNKYVRKTFYTHDPIVGYTDYPFLSKA 247 (257)
Q Consensus 168 ir~~~~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 247 (257)
||+.+++|||++|++++++|+++|++|.||+|+|||++|+||||++|+++|.+++++++.+||+.+..+||+|||++. .
T Consensus 314 vk~~~~iPvi~~G~i~~~~a~~~l~~g~aD~V~igR~~l~dP~l~~k~~~g~~l~~~~~~tfy~~~~~~Gy~dyp~~~-~ 392 (402)
T 2hsa_B 314 LRNAYQGTFICSGGYTRELGIEAVAQGDADLVSYGRLFISNPDLVMRIKLNAPLNKYNRKTFYTQDPVVGYTDYPFLQ-G 392 (402)
T ss_dssp HHHHCSSCEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHHTCCCCCCCGGGSSCCCSSTTTTCSCCC---
T ss_pred HHHHCCCCEEEeCCCCHHHHHHHHHCCCCceeeecHHHHhCchHHHHHHhCCCCCCCChhhcccCCCCCCcccCccch-h
Confidence 999999999999999999999999999999999999999999999999999999999999999334458999999994 5
Q ss_pred ccccccccCC
Q 025135 248 NKGQATLSRL 257 (257)
Q Consensus 248 ~~~~~~~~~~ 257 (257)
..++.+||||
T Consensus 393 ~~~~~~~~~~ 402 (402)
T 2hsa_B 393 NGSNGPLSRL 402 (402)
T ss_dssp ----------
T ss_pred hhccchhccC
Confidence 6777799997
No 4
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=100.00 E-value=1.3e-61 Score=443.74 Aligned_cols=215 Identities=42% Similarity=0.714 Sum_probs=196.2
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHH
Q 025135 9 YPNPQALQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVA 88 (257)
Q Consensus 9 ~~~p~~lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~ 88 (257)
+.+|++||.+||+++|++|++||++|++|||||||||+||||||+|||||.+|+|+|+||||++||+||++|||++||++
T Consensus 137 ~~~pr~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~ 216 (362)
T 4ab4_A 137 YPTPRALETEEINDIVEAYRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEV 216 (362)
T ss_dssp CCCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHh
Confidence 56799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCeEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHH
Q 025135 89 IGADRVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTW 168 (257)
Q Consensus 89 vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 168 (257)
+|+++|+||||+++.+.+..+.++.+++.++++.|+++| +||||++.+.. .. .+++.|
T Consensus 217 vg~~~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~G------vd~i~v~~~~~------------~~----~~~~~i 274 (362)
T 4ab4_A 217 WGAQRVGVHLAPRADAHDMGDADRAETFTYVARELGKRG------IAFICSREREA------------DD----SIGPLI 274 (362)
T ss_dssp HCGGGEEEEECTTCCSSSCCCTTHHHHHHHHHHHHHHTT------CSEEEEECCCC------------TT----CCHHHH
T ss_pred cCCCceEEEeeccccccccCCCCcHHHHHHHHHHHHHhC------CCEEEECCCCC------------CH----HHHHHH
Confidence 997799999998755554444456788999999999999 99999997641 01 245679
Q ss_pred HHHhCCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCchHHHHHHcCCCCCCccccccccCCCCCCcccccCCcc
Q 025135 169 RRSYQGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNPDLVLRFKLNAPLNKYVRKTFYTHDPIVGYTDYPFLSK 246 (257)
Q Consensus 169 r~~~~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 246 (257)
|+.+++|||++|++|+++|+++|++|.||+|+|||++++||||++|+++|.+++++|+.+||+.++ +||+|||++..
T Consensus 275 k~~~~iPvi~~Ggit~e~a~~~l~~g~aD~V~iGR~~lanPdl~~k~~~g~~l~~~d~~~~y~~~~-~gy~dyp~~~~ 351 (362)
T 4ab4_A 275 KEAFGGPYIVNERFDKASANAALASGKADAVAFGVPFIANPDLPARLAADAPLNEAHPETFYGKGP-VGYIDYPRLKL 351 (362)
T ss_dssp HHHHCSCEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHTTCCCCCCCGGGSSSSSS-TTTTCSCCCC-
T ss_pred HHHCCCCEEEeCCCCHHHHHHHHHcCCccEEEECHHhHhCcHHHHHHHcCCCCCCCChhhccCCCC-CCcccccccch
Confidence 999999999999999999999999999999999999999999999999999999999999999764 99999999864
No 5
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=100.00 E-value=2.1e-61 Score=442.31 Aligned_cols=214 Identities=46% Similarity=0.739 Sum_probs=196.1
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHH
Q 025135 9 YPNPQALQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVA 88 (257)
Q Consensus 9 ~~~p~~lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~ 88 (257)
+.+|++||.+||+++|++|++||++|++|||||||||+||||||+|||||.+|+|+|+||||+|||+||++|||++||++
T Consensus 145 ~~~pr~mt~~eI~~ii~~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~ 224 (361)
T 3gka_A 145 YVTPRALELDEIPGVVAAFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDV 224 (361)
T ss_dssp CCCCEECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHH
T ss_pred CCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHH
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCeEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHH
Q 025135 89 IGADRVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTW 168 (257)
Q Consensus 89 vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 168 (257)
+|+++|+||||+++.+.+..+.++.+++.++++.|+++| +|||+++.+.. .. .+++.|
T Consensus 225 vg~~~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~G------vd~i~v~~~~~------------~~----~~~~~i 282 (361)
T 3gka_A 225 WSAARVGVHLAPRGDAHTMGDSDPAATFGHVARELGRRR------IAFLFARESFG------------GD----AIGQQL 282 (361)
T ss_dssp HCGGGEEEEECTTCCSSSCCCSCHHHHHHHHHHHHHHTT------CSEEEEECCCS------------TT----CCHHHH
T ss_pred cCCCeEEEecccccccCCCCCCCcHHHHHHHHHHHHHcC------CCEEEECCCCC------------CH----HHHHHH
Confidence 997799999998755444444456788999999999999 99999987641 01 245679
Q ss_pred HHHhCCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCchHHHHHHcCCCCCCccccccccCCCCCCcccccCCc
Q 025135 169 RRSYQGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNPDLVLRFKLNAPLNKYVRKTFYTHDPIVGYTDYPFLS 245 (257)
Q Consensus 169 r~~~~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~ 245 (257)
|+.+++|||++|++|+++|+++|++|.||+|++||++|+||||++|+++|.+++++++.+||+.++ +||+|||++.
T Consensus 283 k~~~~iPvi~~Ggit~e~a~~~l~~G~aD~V~iGR~~ladPdl~~k~~~g~~l~~~~~~~~y~~~~-~gy~dyp~~~ 358 (361)
T 3gka_A 283 KAAFGGPFIVNENFTLDSAQAALDAGQADAVAWGKLFIANPDLPRRFKLNAPLNEPNAATFYAQGE-VGYTDYPALE 358 (361)
T ss_dssp HHHHCSCEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHHTCCCCCCCGGGSSCSSS-TTTTCSCCCC
T ss_pred HHHcCCCEEEeCCCCHHHHHHHHHcCCccEEEECHHhHhCcHHHHHHHhCCCCCCCccccccCCCC-CCcccChhcc
Confidence 999999999999999999999999999999999999999999999999999999999999999764 9999999986
No 6
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=100.00 E-value=8e-59 Score=428.08 Aligned_cols=222 Identities=41% Similarity=0.718 Sum_probs=197.4
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHH
Q 025135 9 YPNPQALQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVA 88 (257)
Q Consensus 9 ~~~p~~lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~ 88 (257)
+..|++||.+||++++++|++||++|++|||||||||+||||||+|||||.+|+|+|+||||++||+||++|||++||++
T Consensus 150 ~~~p~~mt~~eI~~~i~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~a 229 (377)
T 2r14_A 150 TSTPRALETDEIPGIVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEV 229 (377)
T ss_dssp CCCCEECCGGGHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHH
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCeEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHH
Q 025135 89 IGADRVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTW 168 (257)
Q Consensus 89 vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 168 (257)
+|+++|+||||+.+.+.+..++.+.+++.++++.|++.| +|||+++.+.+.... . .. .+..++.+
T Consensus 230 vg~~~v~vrls~~~~~~~~~~~~~~~~~~~la~~le~~G------vd~i~v~~~~~~~~~---~----~~--~~~~~~~i 294 (377)
T 2r14_A 230 FGPERVGIRLTPFLELFGLTDDEPEAMAFYLAGELDRRG------LAYLHFNEPDWIGGD---I----TY--PEGFREQM 294 (377)
T ss_dssp HCGGGEEEEECTTCCCTTCCCSCHHHHHHHHHHHHHHTT------CSEEEEECCC-------------CC--CTTHHHHH
T ss_pred cCCCcEEEEeccccccCCCCCCCCHHHHHHHHHHHHHcC------CCEEEEeCCcccCCC---C----cc--hHHHHHHH
Confidence 996699999998655544334467888999999999999 999999986543211 0 11 23566789
Q ss_pred HHHhCCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCchHHHHHHcCCCCCCccccccccCCCCCCcccccCCcc
Q 025135 169 RRSYQGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNPDLVLRFKLNAPLNKYVRKTFYTHDPIVGYTDYPFLSK 246 (257)
Q Consensus 169 r~~~~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 246 (257)
|+.+++|||++|++++++|+++|++|.||+|++||++++||||++|+++|.+++++++.+||+.+ .+||+|||++.+
T Consensus 295 k~~~~iPvi~~Ggi~~~~a~~~l~~g~aD~V~igR~~l~~P~l~~k~~~g~~l~~~~~~t~y~~~-~~gy~dyp~~~~ 371 (377)
T 2r14_A 295 RQRFKGGLIYCGNYDAGRAQARLDDNTADAVAFGRPFIANPDLPERFRLGAALNEPDPSTFYGGA-EVGYTDYPFLDN 371 (377)
T ss_dssp HHHCCSEEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHHTCCCCCCCGGGSSSSS-STTTTCSCCCCC
T ss_pred HHHCCCCEEEECCCCHHHHHHHHHCCCceEEeecHHHHhCchHHHHHHcCCCCCCCCHHhcCCCC-CCCcccCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999865 489999999964
No 7
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=100.00 E-value=9e-59 Score=427.72 Aligned_cols=224 Identities=59% Similarity=1.014 Sum_probs=195.9
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHH
Q 025135 9 YPNPQALQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVA 88 (257)
Q Consensus 9 ~~~p~~lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~ 88 (257)
+..|++||.+||++++++|++||++|++|||||||||+||||||+|||||.+|+|+|+||||++||+||++|||++||++
T Consensus 151 ~~~p~~mt~~eI~~~i~~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~a 230 (376)
T 1icp_A 151 FTRPRRLTTDEIPQIVNEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANE 230 (376)
T ss_dssp CCCCEECCTTTHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHH
Confidence 36799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCeEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHH
Q 025135 89 IGADRVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTW 168 (257)
Q Consensus 89 vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 168 (257)
+|+++|+||||+.+.+.+..+.++.+++.++++.|+++| ++|||++.+.+.... ........++.+
T Consensus 231 vg~~~V~vrls~~~~~~g~~~~~~~~~~~~la~~le~~G------vd~i~v~~~~~~~~~--------~~~~~~~~~~~v 296 (376)
T 1icp_A 231 IGSDRVGIRISPFAHYNEAGDTNPTALGLYMVESLNKYD------LAYCHVVEPRMKTAW--------EKIECTESLVPM 296 (376)
T ss_dssp HCGGGEEEEECTTCCTTTCCCSCHHHHHHHHHHHHGGGC------CSEEEEECCSCCC--------------CCCCSHHH
T ss_pred hcCCceEEEeccccccCCCCCCCCHHHHHHHHHHHHHcC------CCEEEEcCCcccCCC--------CccccHHHHHHH
Confidence 996699999998644433333457788999999999999 999999986543211 000112345678
Q ss_pred HHHhCCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCchHHHHHHcCCCCCCccccccccCCCCCCcccccCCcc
Q 025135 169 RRSYQGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNPDLVLRFKLNAPLNKYVRKTFYTHDPIVGYTDYPFLSK 246 (257)
Q Consensus 169 r~~~~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 246 (257)
|+.+++|||++|++++++|+++|++|.||+|++||++++||||++|+++|.+++++++.+||+.+..+||+|||++.+
T Consensus 297 r~~~~iPvi~~G~i~~~~a~~~l~~g~aD~V~~gR~~l~~P~l~~k~~~g~~l~~~~~~~~y~~~~~~gy~dyp~~~~ 374 (376)
T 1icp_A 297 RKAYKGTFIVAGGYDREDGNRALIEDRADLVAYGRLFISNPDLPKRFELNAPLNKYNRDTFYTSDPIVGYTDYPFLET 374 (376)
T ss_dssp HHHCCSCEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHHTCCCCCCCGGGSSCCCSSTTTTCSCCCC-
T ss_pred HHHcCCCEEEeCCCCHHHHHHHHHCCCCcEEeecHHHHhCccHHHHHHcCCCCCCCCHHHcccCCCCCCcccCccccc
Confidence 999999999999999999999999999999999999999999999999999999999999994345699999999964
No 8
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=100.00 E-value=2e-59 Score=433.73 Aligned_cols=227 Identities=35% Similarity=0.610 Sum_probs=194.5
Q ss_pred CCCCCCCChhhHHHHHHH-HHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHH
Q 025135 9 YPNPQALQTSEIPEVIDQ-YRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIV 87 (257)
Q Consensus 9 ~~~p~~lt~~eI~~ii~~-f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~ 87 (257)
+..|++||.+||+++|++ |++||++|++|||||||||+||||||+|||||.+|+|+|+||||+|||+||++|||++||+
T Consensus 151 ~~~pr~lt~~eI~~ii~~~~~~aa~~a~~aGfdgveih~~~GYLl~QFLsp~~N~r~D~YGGs~enr~r~~~ei~~av~~ 230 (407)
T 3tjl_A 151 GNPVRALTTQEVKDLVYEAYTNAAQKAMDAGFDYIELHAAHGYLLDQFLQPCTNQRTDEYGGSIENRARLILELIDHLST 230 (407)
T ss_dssp TCCCEECCHHHHHHHHHTHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEECCccchHHHHhcCccccccCCcCCCChhhChHHHHHHHHHHHH
Confidence 467999999999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCeEEEEEccCCCCCCCCCC-C---cHHHHHHHHHHH---HhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchh
Q 025135 88 AIGADRVGVRMSPAIDHLDATDS-D---PLGLGLAVIQGL---NKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDE 160 (257)
Q Consensus 88 ~vg~~~v~vrls~~~~~~~~~~~-~---~~~~~~~l~~~L---~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~ 160 (257)
++|+++|++|||+++.++++.+. + +.+++.++++.| ++.| ..++|||+++++....... ....
T Consensus 231 ~~~~~~v~~r~~~~~~~~g~~~~~d~~~~~~~~~~l~~~L~~~~~~G----~~l~ylhv~~~~~~~~~~~------~~~~ 300 (407)
T 3tjl_A 231 IVGADKIGIRISPWATFQNMKAHKDTVHPLTTFSYLVHELQQRADKG----QGIAYISVVEPRVSGNVDV------SEED 300 (407)
T ss_dssp HHCGGGEEEEECTTCCGGGCCGGGSSSCHHHHHHHHHHHHHHHHHTT----CCCSEEEEECTTEETTEEC------CGGG
T ss_pred HhCCCeEEEEECcccccCCCcccccccccHHHHHHHHHHHHhHhhcC----CceeEEEEEccccCCCCcC------Cccc
Confidence 99987999999997666554433 3 478899999999 7776 2389999998765432100 1111
Q ss_pred HHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHHHc---CCCcEEEechHHhhCchHHHHHHcCCCCCCccccccccCCCCC
Q 025135 161 EAQLLRTWRRSYQGTFICSGGF-TRELGIQALAE---DGADLVAYGRLFISNPDLVLRFKLNAPLNKYVRKTFYTHDPIV 236 (257)
Q Consensus 161 ~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~~---g~~D~V~igR~~iadP~l~~k~~~g~~~~~~~~~~~~~~~~~~ 236 (257)
....+..+|+.+++|||++|++ +.+++.+++++ |.||+|+|||++|+||||++|+++|.+++++|+.+||+.++ .
T Consensus 301 ~~~~~~~ir~~~~~PvI~~Ggi~~~~dA~~~i~~~~~g~aDlVa~GR~~iaNPdL~~ri~~g~~l~~~d~~tfy~~~~-~ 379 (407)
T 3tjl_A 301 QAGDNEFVSKIWKGVILKAGNYSYDAPEFKTLKEDIADKRTLVGFSRYFTSNPNLVWKLRDGIDLVPYDRNTFYSDNN-Y 379 (407)
T ss_dssp CCCCSHHHHHHCCSEEEEESCGGGGTTTTHHHHHHHTTSSEEEECSHHHHHCTTHHHHHHHTCCBCCCCGGGSSCSSS-T
T ss_pred hhHHHHHHHHHhCCCEEecCCCCCHHHHHHHHHhhccCCCeEEEeChhhhhCchHHHHHHcCCCCCCCccccccCCCC-C
Confidence 1123456888999999999999 45668777777 89999999999999999999999999999999999999765 7
Q ss_pred CcccccCCcc
Q 025135 237 GYTDYPFLSK 246 (257)
Q Consensus 237 g~~~~~~~~~ 246 (257)
||+|||++..
T Consensus 380 GY~dyp~~~~ 389 (407)
T 3tjl_A 380 GYNTFSMDSE 389 (407)
T ss_dssp TTGGGGSCGG
T ss_pred CcccCcchhh
Confidence 9999999975
No 9
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=100.00 E-value=1.6e-57 Score=418.01 Aligned_cols=220 Identities=43% Similarity=0.725 Sum_probs=197.9
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHH
Q 025135 9 YPNPQALQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVA 88 (257)
Q Consensus 9 ~~~p~~lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~ 88 (257)
+..|++||.+||++++++|++||++|+++||||||||+|||||++|||||.+|+|+|+||||++||+||++|||++||++
T Consensus 145 ~~~p~~mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~ 224 (365)
T 2gou_A 145 VAVPRAMTKADIAQVIADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDA 224 (365)
T ss_dssp CCCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHH
T ss_pred CCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCeEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHH
Q 025135 89 IGADRVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTW 168 (257)
Q Consensus 89 vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 168 (257)
+|+++|+||||+++.+.+..+..+.+++.++++.|++.| +|||+++.+.+... . .. ....++.+
T Consensus 225 vg~~pv~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G------~d~i~v~~~~~~~~-------~-~~--~~~~~~~i 288 (365)
T 2gou_A 225 IGAERVGVRLAPLTTLNGTVDADPILTYTAAAALLNKHR------IVYLHIAEVDWDDA-------P-DT--PVSFKRAL 288 (365)
T ss_dssp HCGGGEEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTT------CSEEEEECCBTTBC-------C-CC--CHHHHHHH
T ss_pred cCCCcEEEEEccccccCCCCCCCCHHHHHHHHHHHHHcC------CCEEEEeCCCcCCC-------C-Cc--cHHHHHHH
Confidence 996699999998654544434567888999999999999 99999997654211 0 11 13567889
Q ss_pred HHHhCCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCchHHHHHHcCCCCCCccccccccCCCCCCcccccCCc
Q 025135 169 RRSYQGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNPDLVLRFKLNAPLNKYVRKTFYTHDPIVGYTDYPFLS 245 (257)
Q Consensus 169 r~~~~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~ 245 (257)
|+.+++|||++|++++++|+++|++|.||+|++||++++||+|++|+++|.+++++++.+||+.++ +||+|||++.
T Consensus 289 ~~~~~iPvi~~Ggi~~~~a~~~l~~g~aD~V~igR~~i~~P~l~~~~~~g~~l~~~~~~~~y~~~~-~gy~dyp~~~ 364 (365)
T 2gou_A 289 REAYQGVLIYAGRYNAEKAEQAINDGLADMIGFGRPFIANPDLPERLRHGYPLAEHVPATLFGGGE-KGLTDYPTYQ 364 (365)
T ss_dssp HHHCCSEEEEESSCCHHHHHHHHHTTSCSEEECCHHHHHCTTHHHHHHHTCCCCCCCGGGSSSSSS-TTTTCCCCCC
T ss_pred HHHCCCcEEEeCCCCHHHHHHHHHCCCcceehhcHHHHhCchHHHHHHcCCCCCCCchhhccCCCC-CCCCCCcCcC
Confidence 999999999999999999999999999999999999999999999999999999999999998654 8999999984
No 10
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=100.00 E-value=2.8e-57 Score=416.29 Aligned_cols=219 Identities=38% Similarity=0.641 Sum_probs=196.2
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHH
Q 025135 9 YPNPQALQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVA 88 (257)
Q Consensus 9 ~~~p~~lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~ 88 (257)
+..|++||.+||++++++|++||++|+++||||||||+||||||+|||||.+|+|+|+||||++||+||++|||++||++
T Consensus 145 ~~~p~~mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~ 224 (364)
T 1vyr_A 145 TTTPRALELDEIPGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNE 224 (364)
T ss_dssp CCCCEECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHH
T ss_pred CCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHh
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCeEEEEEccCCCCCCC-CCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHH
Q 025135 89 IGADRVGVRMSPAIDHLDA-TDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRT 167 (257)
Q Consensus 89 vg~~~v~vrls~~~~~~~~-~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (257)
+|+++|+||||+.+.+.+. .+.++.+++.++++.|++.| +|||+++.+.+.... .. ....++.
T Consensus 225 vg~~~v~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G------~d~i~v~~~~~~~~~--------~~--~~~~~~~ 288 (364)
T 1vyr_A 225 WSADRIGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRG------IAYLHMSETDLAGGK--------PY--SEAFRQK 288 (364)
T ss_dssp SCGGGEEEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTT------CSEEEEECCBTTBCC--------CC--CHHHHHH
T ss_pred cCCCcEEEEEccccccccccCCCCCHHHHHHHHHHHHHhC------CCEEEEecCcccCCC--------cc--cHHHHHH
Confidence 9966999999986545432 12356788999999999999 999999976443210 11 2356788
Q ss_pred HHHHhCCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCchHHHHHHcCCCCCCccccccccCCCCCCcccccCC
Q 025135 168 WRRSYQGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNPDLVLRFKLNAPLNKYVRKTFYTHDPIVGYTDYPFL 244 (257)
Q Consensus 168 ir~~~~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~ 244 (257)
+|+.+++|||++|++++++++++|++|.||+|++||++++||||++|+++|.+++++++.+||+.++ +||+|||++
T Consensus 289 v~~~~~iPvi~~Ggit~~~a~~~l~~g~aD~V~~gR~~l~~P~~~~~~~~g~~l~~~~~~~~y~~~~-~gy~dyp~~ 364 (364)
T 1vyr_A 289 VRERFHGVIIGAGAYTAEKAEDLIGKGLIDAVAFGRDYIANPDLVARLQKKAELNPQRPESFYGGGA-EGYTDYPSL 364 (364)
T ss_dssp HHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHHTCCCCCCCGGGSSSSSS-TTTTCSCCC
T ss_pred HHHHCCCCEEEECCcCHHHHHHHHHCCCccEEEECHHHHhChhHHHHHHcCCCCCCCCHHhccCCCC-CCcCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999998654 899999985
No 11
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=100.00 E-value=3.7e-57 Score=417.11 Aligned_cols=218 Identities=38% Similarity=0.641 Sum_probs=196.3
Q ss_pred CCCCCCCChhhHH-HHHHHHHHHHHHHH-HcCCCEEEecccccchhhhcCCCCcCCc-CCCCCC-chhhHhhHHHHHHHH
Q 025135 9 YPNPQALQTSEIP-EVIDQYRQAALNAI-QAGFDGIEIHGAHGYLIDQFLKDGINDR-TDEYGG-SIENRCRFLMQLVRE 84 (257)
Q Consensus 9 ~~~p~~lt~~eI~-~ii~~f~~AA~~a~-~aGfDgVEIh~a~GyLl~qFlSp~~N~R-~D~yGG-s~enR~r~~~eiv~a 84 (257)
+..|++||.+||+ +++++|++||++|+ ++||||||||+||||||+|||||.+|+| +|+||| |++||+||++|||++
T Consensus 157 ~~~pr~lt~~eI~~~~i~~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~a 236 (379)
T 3aty_A 157 YGVPEELTDDEVRDGIIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKS 236 (379)
T ss_dssp CCCCEECCHHHHHHTHHHHHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHH
T ss_pred CCCCccCCHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHH
Confidence 4689999999999 99999999999999 9999999999999999999999999999 999999 999999999999999
Q ss_pred HHHHhCCCeEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHH
Q 025135 85 VIVAIGADRVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQL 164 (257)
Q Consensus 85 iR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (257)
||+++|+++|+||||+++.+.+..++.+.+++.++++.|++.| ++||+++.+.+... ..+. .
T Consensus 237 Vr~avg~~~v~vRis~~~~~~~~~~~~~~~~~~~la~~l~~~G------vd~i~v~~~~~~~~---------~~~~--~- 298 (379)
T 3aty_A 237 VCDAVGSDRVGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLS------LAYLHYLRGDMVNQ---------QIGD--V- 298 (379)
T ss_dssp HHHHHCGGGEEEEECTTCCGGGCCCSCHHHHHHHHHHHHGGGC------CSEEEEECSCTTSC---------CCCC--H-
T ss_pred HHHhcCCCeEEEEECcccccccCCCCCCHHHHHHHHHHHHHhC------CCEEEEcCCCcCCC---------CccH--H-
Confidence 9999997789999998644333333457888999999999999 99999998654321 0111 4
Q ss_pred HHHHHHHhCCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCchHHHHHHcCCCCCCccccccccCCCCCCcccccCC
Q 025135 165 LRTWRRSYQGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNPDLVLRFKLNAPLNKYVRKTFYTHDPIVGYTDYPFL 244 (257)
Q Consensus 165 ~~~ir~~~~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~ 244 (257)
++.||+.+++|||++|++|+++|+++|++|.||+|++||++|+||+|++|+++|.+++++++.+||+.+ .+||+|||++
T Consensus 299 ~~~ir~~~~iPvi~~G~it~~~a~~~l~~g~aD~V~igR~~l~~P~l~~k~~~g~~l~~~~~~t~y~~~-~~gy~dyp~~ 377 (379)
T 3aty_A 299 VAWVRGSYSGVKISNLRYDFEEADQQIREGKVDAVAFGAKFIANPDLVERAQQNWPLNEPRPETYYTRT-AVGYNDYPTY 377 (379)
T ss_dssp HHHHHTTCCSCEEEESSCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHHTCCCCCCCGGGTTCSS-STTTTCCCCT
T ss_pred HHHHHHHCCCcEEEECCCCHHHHHHHHHcCCCeEEEecHHHHhCcHHHHHHHcCCCCCCCCHhhccCCC-CCCccCCccc
Confidence 678999999999999999999999999999999999999999999999999999999999999999865 4899999998
Q ss_pred c
Q 025135 245 S 245 (257)
Q Consensus 245 ~ 245 (257)
.
T Consensus 378 ~ 378 (379)
T 3aty_A 378 N 378 (379)
T ss_dssp T
T ss_pred C
Confidence 4
No 12
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=100.00 E-value=5.9e-53 Score=384.32 Aligned_cols=200 Identities=27% Similarity=0.322 Sum_probs=175.4
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHH
Q 025135 9 YPNPQALQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVA 88 (257)
Q Consensus 9 ~~~p~~lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~ 88 (257)
+..|++||.+||+++|++|++||++|++|||||||||+||||||+|||||.+|+|+|+||||+|||+||++|||++||++
T Consensus 128 ~~~p~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~ 207 (340)
T 3gr7_A 128 SPTPKEMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREV 207 (340)
T ss_dssp SCCCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHh
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCeEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHH
Q 025135 89 IGADRVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTW 168 (257)
Q Consensus 89 vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 168 (257)
+ +.+|+||||+. ++.+. +.+.+++.++++.|+++| +||||++.+.+.... . .........+++.+
T Consensus 208 v-~~pv~vRls~~-~~~~~--g~~~~~~~~la~~L~~~G------vd~i~vs~g~~~~~~-~----~~~~~~~~~~~~~i 272 (340)
T 3gr7_A 208 W-DGPLFVRISAS-DYHPD--GLTAKDYVPYAKRMKEQG------VDLVDVSSGAIVPAR-M----NVYPGYQVPFAELI 272 (340)
T ss_dssp C-CSCEEEEEESC-CCSTT--SCCGGGHHHHHHHHHHTT------CCEEEEECCCSSCCC-C----CCCTTTTHHHHHHH
T ss_pred c-CCceEEEeccc-cccCC--CCCHHHHHHHHHHHHHcC------CCEEEEecCCccCCC-C----CCCccccHHHHHHH
Confidence 9 55899999986 34332 245678899999999999 999999975443211 0 01223345678889
Q ss_pred HHHhCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCchHHHHHHcCCCCCC
Q 025135 169 RRSYQGTFICSGGF-TRELGIQALAEDGADLVAYGRLFISNPDLVLRFKLNAPLNK 223 (257)
Q Consensus 169 r~~~~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~g~~~~~ 223 (257)
|+.+++|||++|++ ++++|+++|++|.||+|++||++++||||++|++++.+.+.
T Consensus 273 k~~~~iPVi~~GgI~s~e~a~~~L~~G~aD~V~iGR~~lanPdl~~ki~~~l~~~~ 328 (340)
T 3gr7_A 273 RREADIPTGAVGLITSGWQAEEILQNGRADLVFLGRELLRNPYWPYAAARELGAKI 328 (340)
T ss_dssp HHHTTCCEEEESSCCCHHHHHHHHHTTSCSEEEECHHHHHCTTHHHHHHHHTTCCC
T ss_pred HHHcCCcEEeeCCCCCHHHHHHHHHCCCeeEEEecHHHHhCchHHHHHHHHCCCCC
Confidence 99999999999999 89999999999999999999999999999999999877654
No 13
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=100.00 E-value=6.8e-53 Score=385.28 Aligned_cols=201 Identities=29% Similarity=0.394 Sum_probs=175.5
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHH
Q 025135 9 YPNPQALQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVA 88 (257)
Q Consensus 9 ~~~p~~lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~ 88 (257)
+..|++||.+||+++|++|++||++|++|||||||||++|||||+|||||.+|+|+|+||||++||+||++|||++||++
T Consensus 136 ~~~p~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~a 215 (349)
T 3hgj_A 136 YPVPEPLDEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREV 215 (349)
T ss_dssp CCCCEECCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHH
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCC-eEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHH
Q 025135 89 IGAD-RVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRT 167 (257)
Q Consensus 89 vg~~-~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (257)
+|++ +|+||||+.+ +.+. +.+.+++.++++.|++.| +||||++.+........ .........+++.
T Consensus 216 vG~d~pV~vRls~~~-~~~~--g~~~~~~~~la~~L~~~G------vd~i~vs~g~~~~~~~~----~~~~~~~~~~~~~ 282 (349)
T 3hgj_A 216 VPRELPLFVRVSATD-WGEG--GWSLEDTLAFARRLKELG------VDLLDCSSGGVVLRVRI----PLAPGFQVPFADA 282 (349)
T ss_dssp SCTTSCEEEEEESCC-CSTT--SCCHHHHHHHHHHHHHTT------CCEEEEECCCSCSSSCC----CCCTTTTHHHHHH
T ss_pred hcCCceEEEEecccc-ccCC--CCCHHHHHHHHHHHHHcC------CCEEEEecCCcCccccc----CCCccccHHHHHH
Confidence 9988 7999999863 3322 346788999999999999 99999996543221100 0112234567888
Q ss_pred HHHHhCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCchHHHHHHcCCCCC
Q 025135 168 WRRSYQGTFICSGGF-TRELGIQALAEDGADLVAYGRLFISNPDLVLRFKLNAPLN 222 (257)
Q Consensus 168 ir~~~~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~g~~~~ 222 (257)
+|+.+++|||++|++ |+++|+++|++|.||+|++||++++||||++|++++...+
T Consensus 283 ir~~~~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~iGR~~lanPdl~~k~~~~l~~~ 338 (349)
T 3hgj_A 283 VRKRVGLRTGAVGLITTPEQAETLLQAGSADLVLLGRVLLRDPYFPLRAAKALGVA 338 (349)
T ss_dssp HHHHHCCEEEECSSCCCHHHHHHHHHTTSCSEEEESTHHHHCTTHHHHHHHHTTCC
T ss_pred HHHHcCceEEEECCCCCHHHHHHHHHCCCceEEEecHHHHhCchHHHHHHHHCCCC
Confidence 999999999999999 8999999999999999999999999999999999877654
No 14
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=100.00 E-value=4.9e-52 Score=378.23 Aligned_cols=196 Identities=31% Similarity=0.444 Sum_probs=171.4
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHH
Q 025135 9 YPNPQALQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVA 88 (257)
Q Consensus 9 ~~~p~~lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~ 88 (257)
+.+|++||.+||+++|++|++||++|++|||||||||+||||||+|||||.+|+|+|+||||+|||+||++|||++||++
T Consensus 127 ~~~p~~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~a 206 (343)
T 3kru_A 127 YKLPRELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKN 206 (343)
T ss_dssp SCCCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHT
T ss_pred ccCchhcCHHHHHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhc
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCC-eEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHH
Q 025135 89 IGAD-RVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRT 167 (257)
Q Consensus 89 vg~~-~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (257)
+|++ +|+||||+. +|.+. +.+.+++.++++.|+++ +|||+++.+....... .........+++.
T Consensus 207 vg~d~pv~vRls~~-~~~~~--g~~~~~~~~~a~~l~~~-------vd~i~vs~g~~~~~~~-----~~~~~~~~~~~~~ 271 (343)
T 3kru_A 207 WPENKPIFVRVSAD-DYMEG--GINIDMMVEYINMIKDK-------VDLIDVSSGGLLNVDI-----NLYPGYQVKYAET 271 (343)
T ss_dssp SCTTSCEEEEEECC-CSSTT--SCCHHHHHHHHHHHTTT-------CSEEEEECCCSSCCCC-----CCCTTTTHHHHHH
T ss_pred CCccCCeEEEeech-hhhcc--CccHHHHHHHHHHhhcc-------ccEEeccCCceEeeee-----cccCceeehHHHH
Confidence 9988 899999985 44432 35688999999999987 5899997554332110 0012234567888
Q ss_pred HHHHhCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCchHHHHHHcCCC
Q 025135 168 WRRSYQGTFICSGGF-TRELGIQALAEDGADLVAYGRLFISNPDLVLRFKLNAP 220 (257)
Q Consensus 168 ir~~~~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~g~~ 220 (257)
+|+.+++|||++|++ ++++|+++|++|.||+|+|||++|+||||++|++ |.+
T Consensus 272 ir~~~~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~iGR~~lanPdl~~k~~-~~~ 324 (343)
T 3kru_A 272 IKKRCNIKTSAVGLITTQELAEEILSNERADLVALGRELLRNPYWVLHTY-TSK 324 (343)
T ss_dssp HHHHHTCEEEEESSCCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHTC-SSG
T ss_pred HHHhcCcccceeeeeeHHHHHHHHHhchhhHHHHHHHHHhcCCeEEEEEe-ccc
Confidence 999999999999999 8999999999999999999999999999999999 543
No 15
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=100.00 E-value=1.4e-52 Score=390.89 Aligned_cols=201 Identities=28% Similarity=0.405 Sum_probs=169.9
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCch-hhHhhHHHHHHHHHHH
Q 025135 9 YPNPQALQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSI-ENRCRFLMQLVREVIV 87 (257)
Q Consensus 9 ~~~p~~lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~-enR~r~~~eiv~aiR~ 87 (257)
+..|++||.+||+++|++|++||++|++|||||||||+||||||+|||||.+|+|+|+||||+ |||+||++|||++||+
T Consensus 154 ~~~pr~mt~~eI~~ii~~F~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~ 233 (419)
T 3l5a_A 154 EHVVIAMSHEKINSIIQQYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQE 233 (419)
T ss_dssp SEEEEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHH
Confidence 356999999999999999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred Hh----CCC-eEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHh-cCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhH
Q 025135 88 AI----GAD-RVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNK-LQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEE 161 (257)
Q Consensus 88 ~v----g~~-~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~-~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~ 161 (257)
++ |++ +|++|||+++.+.+. .+.+.+++.++++.|++ +| +||||++.+.+...... .........
T Consensus 234 ~v~~~~~~~f~v~vRis~~~~~~~~-~G~~~ed~~~la~~L~~~~G------vd~I~vs~g~~~~~~~~--~~~~g~~~~ 304 (419)
T 3l5a_A 234 VIDKEAPDNFILGFRATPEETRGSD-LGYTIDEFNQLIDWVMDVSN------IQYLAIASWGRHIYQNT--SRTPGDHFG 304 (419)
T ss_dssp HHHHHCCTTCEEEEEECSCEEETTE-EEECHHHHHHHHHHHHHHSC------CCCEEECCTTCCGGGCB--CCCSSTTTT
T ss_pred HHhhhcCCCeeEEEecccccccCCC-CCCCHHHHHHHHHHHHhhcC------CcEEEEeeCCccccccc--cCCCCcccc
Confidence 99 666 899999986433320 02357889999999999 99 99999998754211000 000111122
Q ss_pred HHHHHHHHHHh--CCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCchHHHHHHcCCC
Q 025135 162 AQLLRTWRRSY--QGTFICSGGF-TRELGIQALAEDGADLVAYGRLFISNPDLVLRFKLNAP 220 (257)
Q Consensus 162 ~~~~~~ir~~~--~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~g~~ 220 (257)
...++.||+.+ ++|||++|+| |+++|+++|++ ||+|+|||++|+||||++|+++|.+
T Consensus 305 ~~~a~~Ik~~v~~~iPVI~~GgI~t~e~Ae~~L~~--aDlVaiGR~~IanPdlv~ki~~G~~ 364 (419)
T 3l5a_A 305 RPVNQIVYEHLAGRIPLIASGGINSPESALDALQH--ADMVGMSSPFVTEPDFVHKLAEQRP 364 (419)
T ss_dssp SBHHHHHHHHHTTSSCEEECSSCCSHHHHHHHGGG--CSEEEESTHHHHCTTHHHHHHTTCG
T ss_pred HHHHHHHHHHcCCCCeEEEECCCCCHHHHHHHHHh--CCcHHHHHHHHHCcHHHHHHHcCCc
Confidence 34567899988 5899999999 99999999998 9999999999999999999999974
No 16
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=100.00 E-value=5e-52 Score=381.31 Aligned_cols=201 Identities=26% Similarity=0.339 Sum_probs=175.0
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHH
Q 025135 9 YPNPQALQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVA 88 (257)
Q Consensus 9 ~~~p~~lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~ 88 (257)
+..|++||.+||+++|++|++||++|++|||||||||+|||||++|||||.+|+|+|+||||+|||+||++|||++||++
T Consensus 142 ~~~p~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~a 221 (363)
T 3l5l_A 142 PKVPREMTLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREV 221 (363)
T ss_dssp CCCCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTT
T ss_pred CCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHH
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCC-eEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHH
Q 025135 89 IGAD-RVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRT 167 (257)
Q Consensus 89 vg~~-~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (257)
+|++ +|+||||+. ++.+.+ ..+.+++.++++.|+++| +||||++.+.+...... ..........++.
T Consensus 222 vg~d~pV~vRis~~-~~~~~G-~~~~~~~~~la~~L~~~G------vd~i~vs~g~~~~~~~~----~~~~~~~~~~~~~ 289 (363)
T 3l5l_A 222 WPENLPLTARFGVL-EYDGRD-EQTLEESIELARRFKAGG------LDLLSVSVGFTIPDTNI----PWGPAFMGPIAER 289 (363)
T ss_dssp SCTTSCEEEEEEEE-CSSSCH-HHHHHHHHHHHHHHHHTT------CCEEEEEECCCSSCCCC----CCCTTTTHHHHHH
T ss_pred cCCCceEEEEecch-hcCCCC-CCCHHHHHHHHHHHHHcC------CCEEEEecCcccccccc----CCCcchhHHHHHH
Confidence 9987 799999985 343321 145788999999999999 99999997543221100 0112234567788
Q ss_pred HHHHhCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCchHHHHHHcCCCC
Q 025135 168 WRRSYQGTFICSGGF-TRELGIQALAEDGADLVAYGRLFISNPDLVLRFKLNAPL 221 (257)
Q Consensus 168 ir~~~~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~g~~~ 221 (257)
+|+.+++|||++|++ ++++|+++|++|.||+|++||++++||+|++|++++..+
T Consensus 290 ir~~~~iPVi~~GgI~s~e~a~~~l~~G~aD~V~iGR~~lanPdl~~k~~~~lg~ 344 (363)
T 3l5l_A 290 VRREAKLPVTSAWGFGTPQLAEAALQANQLDLVSVGRAHLADPHWAYFAAKELGV 344 (363)
T ss_dssp HHHHHTCCEEECSSTTSHHHHHHHHHTTSCSEEECCHHHHHCTTHHHHHHHHTTC
T ss_pred HHHHcCCcEEEeCCCCCHHHHHHHHHCCCccEEEecHHHHhCchHHHHHHHHcCC
Confidence 999999999999999 899999999999999999999999999999999987654
No 17
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=100.00 E-value=2.1e-50 Score=397.56 Aligned_cols=220 Identities=21% Similarity=0.279 Sum_probs=183.0
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccc-hhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHH
Q 025135 9 YPNPQALQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGY-LIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIV 87 (257)
Q Consensus 9 ~~~p~~lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~Gy-Ll~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~ 87 (257)
...|++||.+||+++|++|++||++|++|||||||||+|||| ||+|||||.+|+|||+||||+|||+||++|||++||+
T Consensus 140 ~~~p~~~t~~ei~~~i~~f~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~ 219 (690)
T 3k30_A 140 PIQARAMTKQDIDDLRRWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLD 219 (690)
T ss_dssp SCBCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHH
T ss_pred CCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHH
Confidence 356999999999999999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred HhCCC-eEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHH
Q 025135 88 AIGAD-RVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLR 166 (257)
Q Consensus 88 ~vg~~-~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (257)
++|++ +|++|||+++.+.+ +.+.+++.++++.|++ + +|+++++.+.+..... .........+..+++
T Consensus 220 ~~g~~~~v~~r~s~~~~~~~---g~~~~~~~~~~~~l~~-~------~d~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~ 287 (690)
T 3k30_A 220 ECAGRAAVACRITVEEEIDG---GITREDIEGVLRELGE-L------PDLWDFAMGSWEGDSV--TSRFAPEGRQEEFVA 287 (690)
T ss_dssp HHTTSSEEEEEEECCCCSTT---SCCHHHHHHHHHHHTT-S------SSEEEEECSCHHHHTC--CTTTCCTTTTHHHHT
T ss_pred HhCCCceEEEEECccccCCC---CCCHHHHHHHHHHHHh-h------cCEEEEecccccccCC--CCccCCccccHHHHH
Confidence 99988 89999998644422 2457889999999998 7 8999998754321100 000112233456778
Q ss_pred HHHHHhCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCchHHHHHHcCCC-----CCCcccc---------cccc
Q 025135 167 TWRRSYQGTFICSGGF-TRELGIQALAEDGADLVAYGRLFISNPDLVLRFKLNAP-----LNKYVRK---------TFYT 231 (257)
Q Consensus 167 ~ir~~~~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~g~~-----~~~~~~~---------~~~~ 231 (257)
.+|+.+++|||++|++ ++++|+++|++|.||+|+|||++|+||||++|+++|++ |..|..+ ..|.
T Consensus 288 ~i~~~~~~pvi~~G~i~~~~~a~~~l~~g~~d~v~~gR~~~~~P~~~~~~~~g~~~~i~~c~~c~~C~~~~~~~~~~~C~ 367 (690)
T 3k30_A 288 GLKKLTTKPVVGVGRFTSPDAMVRQIKAGILDLIGAARPSIADPFLPNKIRDGRLNLIRECIGCNICVSGDLTMSPIRCT 367 (690)
T ss_dssp TSGGGCSSCEEECSCCCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHTTCGGGCCCCCCCCHHHHHHHTTSCCCCS
T ss_pred HHHHHcCCeEEEeCCCCCHHHHHHHHHCCCcceEEEcHHhHhCccHHHHHHcCCccccccccchhhhhhcccCCCcccCC
Confidence 8999999999999999 89999999999999999999999999999999999964 2222111 2366
Q ss_pred CCCCCCccc
Q 025135 232 HDPIVGYTD 240 (257)
Q Consensus 232 ~~~~~g~~~ 240 (257)
.||..|++.
T Consensus 368 vnp~~g~e~ 376 (690)
T 3k30_A 368 QNPSMGEEW 376 (690)
T ss_dssp SCTTTTTTT
T ss_pred cCcccCccc
Confidence 788888764
No 18
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=100.00 E-value=1.7e-49 Score=361.41 Aligned_cols=197 Identities=26% Similarity=0.347 Sum_probs=173.2
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHH
Q 025135 9 YPNPQALQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVA 88 (257)
Q Consensus 9 ~~~p~~lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~ 88 (257)
+..|++||.+||++++++|++||++|++||||+||||++||||++|||||.+|+|+|+||||++||+||++|||++||++
T Consensus 128 ~~~p~~mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~ 207 (338)
T 1z41_A 128 SATPVEMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQV 207 (338)
T ss_dssp SCCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCeEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHH
Q 025135 89 IGADRVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTW 168 (257)
Q Consensus 89 vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 168 (257)
+ +.+|+|||++.+ +.+. +.+.+++.++++.|++.| +||||++.+...... ...........++.+
T Consensus 208 v-~~pv~vris~~~-~~~~--g~~~~~~~~~a~~l~~~G------vd~i~v~~~~~~~~~-----~~~~~~~~~~~~~~i 272 (338)
T 1z41_A 208 W-DGPLFVRVSASD-YTDK--GLDIADHIGFAKWMKEQG------VDLIDCSSGALVHAD-----INVFPGYQVSFAEKI 272 (338)
T ss_dssp C-CSCEEEEEECCC-CSTT--SCCHHHHHHHHHHHHHTT------CCEEEEECCCSSCCC-----CCCCTTTTHHHHHHH
T ss_pred c-CCcEEEEecCcc-cCCC--CCCHHHHHHHHHHHHHcC------CCEEEEecCccccCC-----CCCCccchHHHHHHH
Confidence 9 558999999853 3222 246788999999999999 999999976543110 001122345677889
Q ss_pred HHHhCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCchHHHHHHcCCC
Q 025135 169 RRSYQGTFICSGGF-TRELGIQALAEDGADLVAYGRLFISNPDLVLRFKLNAP 220 (257)
Q Consensus 169 r~~~~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~g~~ 220 (257)
|+.+++|||++|++ |+++++++|++|.||+|++||++++||||++|+++|.+
T Consensus 273 r~~~~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~iGR~~i~nPdl~~ki~~~~~ 325 (338)
T 1z41_A 273 REQADMATGAVGMITDGSMAEEILQNGRADLIFIGRELLRDPFFARTAAKQLN 325 (338)
T ss_dssp HHHHCCEEEECSSCCSHHHHHHHHHTTSCSEEEECHHHHHCTTHHHHHHHHTT
T ss_pred HHHCCCCEEEECCCCCHHHHHHHHHcCCceEEeecHHHHhCchHHHHHHcCCC
Confidence 99999999999999 89999999999999999999999999999999999875
No 19
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=100.00 E-value=2.7e-49 Score=391.98 Aligned_cols=201 Identities=24% Similarity=0.309 Sum_probs=170.4
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHH
Q 025135 9 YPNPQALQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVA 88 (257)
Q Consensus 9 ~~~p~~lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~ 88 (257)
+..|++||.+||++++++|++||++|++|||||||||+||||||+|||||.+|+|+|+||||++||+||++|||++||++
T Consensus 133 ~~~p~~~t~~eI~~~i~~f~~aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~ 212 (729)
T 1o94_A 133 LSYCKEMDLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHA 212 (729)
T ss_dssp TCBCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHH
T ss_pred CCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHH
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCC-eEEEEEccCCCCCCCCCCCc-HHHHHHHHHHHHhcCCccCCceeEEEeeCCC---cccCCCcCCCCCCCchhHHH
Q 025135 89 IGAD-RVGVRMSPAIDHLDATDSDP-LGLGLAVIQGLNKLQIDQGAKLTYLHVTQPR---YTAYGQTESGRPGTEDEEAQ 163 (257)
Q Consensus 89 vg~~-~v~vrls~~~~~~~~~~~~~-~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~---~~~~~~~~~~~~~~~~~~~~ 163 (257)
+|++ +|++|||+++.+.+.+ .+ .+++.++++.|++ + +|+++++.+. +.... ....+.....+..
T Consensus 213 vg~~~pv~vrls~~~~~~~~G--~~~~~~~~~~~~~l~~-~------~d~~~v~~g~~~~~~~~~--~~~~~~~~~~~~~ 281 (729)
T 1o94_A 213 VGSDCAIATRFGVDTVYGPGQ--IEAEVDGQKFVEMADS-L------VDMWDITIGDIAEWGEDA--GPSRFYQQGHTIP 281 (729)
T ss_dssp HTTTSEEEEEEEEECSSCTTS--CCTTTHHHHHHHHHGG-G------CSEEEEEECCSTTGGGTS--CCTTTCCTTTTHH
T ss_pred hCCCceEEEEEccccCcCCCC--CCchHHHHHHHHHHHh-h------cCEEEEeeeccccccccc--CCccccCccccHH
Confidence 9988 7999999864432222 22 3567889999988 7 8888887654 21110 0001112233456
Q ss_pred HHHHHHHHhCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCchHHHHHHcCCC
Q 025135 164 LLRTWRRSYQGTFICSGGF-TRELGIQALAEDGADLVAYGRLFISNPDLVLRFKLNAP 220 (257)
Q Consensus 164 ~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~g~~ 220 (257)
+++.+|+.+++|||++|++ ++++|+++|++|.||+|+|||++|+||||++|+++|.+
T Consensus 282 ~~~~i~~~~~~pvi~~G~i~~~~~a~~~l~~g~aD~V~~gR~~l~~P~~~~~~~~g~~ 339 (729)
T 1o94_A 282 WVKLVKQVSKKPVLGVGRYTDPEKMIEIVTKGYADIIGCARPSIADPFLPQKVEQGRY 339 (729)
T ss_dssp HHHHHHTTCSSCEECCSCCCCHHHHHHHHHTTSCSBEEESHHHHHCTTHHHHHHTTCG
T ss_pred HHHHHHHHCCCEEEEeCCCCCHHHHHHHHHCCCCCEEEeCchhhcCchHHHHHHcCCc
Confidence 7788999999999999999 89999999999999999999999999999999999963
No 20
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=100.00 E-value=1.8e-47 Score=375.53 Aligned_cols=221 Identities=24% Similarity=0.365 Sum_probs=182.9
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHh
Q 025135 10 PNPQALQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAI 89 (257)
Q Consensus 10 ~~p~~lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~v 89 (257)
..|++||.+||+++|++|++||++|+++|||+||||+||||||+|||||.+|+|+|+||||++||+||++||+++||+++
T Consensus 126 ~~p~~~t~~ei~~~i~~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~v 205 (671)
T 1ps9_A 126 FVPHELSHEEILQLIDNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERV 205 (671)
T ss_dssp SCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHc
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC-eEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHH
Q 025135 90 GAD-RVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTW 168 (257)
Q Consensus 90 g~~-~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 168 (257)
|++ +|++|||+++ +.+ .+.+.+++.++++.|+++| +|||+++.+.......... .......+...++.+
T Consensus 206 G~~~~v~vrls~~~-~~~--~g~~~~~~~~~a~~l~~~g------~d~i~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~i 275 (671)
T 1ps9_A 206 GNDFIIIYRLSMLD-LVE--DGGTFAETVELAQAIEAAG------ATIINTGIGWHEARIPTIA-TPVPRGAFSWVTRKL 275 (671)
T ss_dssp CSSSEEEEEEEEEC-CST--TCCCHHHHHHHHHHHHHHT------CSEEEEEECBTTCSSCSSS-TTSCTTTTHHHHHHH
T ss_pred CCCceEEEEECccc-cCC--CCCCHHHHHHHHHHHHhcC------CCEEEcCCCcccccccccc-ccCCcchHHHHHHHH
Confidence 988 8999999863 222 1246788999999999999 9999998543221110000 111223345677889
Q ss_pred HHHhCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCchHHHHHHcCCC--------CCC-cccc------ccccC
Q 025135 169 RRSYQGTFICSGGF-TRELGIQALAEDGADLVAYGRLFISNPDLVLRFKLNAP--------LNK-YVRK------TFYTH 232 (257)
Q Consensus 169 r~~~~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~g~~--------~~~-~~~~------~~~~~ 232 (257)
|+.+++|||++|++ ++++++++|++|.+|+|++||++++||||++|+++|.+ ||+ |... ..|.+
T Consensus 276 ~~~~~iPvi~~Ggi~~~~~a~~~l~~g~aD~V~~gR~~l~~P~l~~k~~~g~~~~~~~c~~c~~~C~~~~~~~~~~~C~~ 355 (671)
T 1ps9_A 276 KGHVSLPLVTTNRINDPQVADDILSRGDADMVSMARPFLADAELLSKAQSGRADEINTCIGCNQACLDQIFVGKVTSCLV 355 (671)
T ss_dssp TTSCSSCEEECSSCCSHHHHHHHHHTTSCSEEEESTHHHHCTTHHHHHHTTCGGGCCCCCCCCTTTHHHHHTTCCCCCSS
T ss_pred HHhcCceEEEeCCCCCHHHHHHHHHcCCCCEEEeCHHHHhCcHHHHHHHcCCCCCcccccccccccchhccCCCceEEEe
Confidence 99999999999999 99999999999999999999999999999999999963 333 1111 12566
Q ss_pred CCCCCccc
Q 025135 233 DPIVGYTD 240 (257)
Q Consensus 233 ~~~~g~~~ 240 (257)
||..|++.
T Consensus 356 np~~~~e~ 363 (671)
T 1ps9_A 356 NPRACHET 363 (671)
T ss_dssp CTTTTCTT
T ss_pred Cccccccc
Confidence 88788763
No 21
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=99.96 E-value=2.2e-28 Score=223.26 Aligned_cols=169 Identities=15% Similarity=0.147 Sum_probs=138.9
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAID 103 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~ 103 (257)
.++|+++|++++++|||+||||+|| |.+|.|+|+||++++||.+++.|||++||++++ .||++|++..
T Consensus 69 p~~~~~aA~~a~~~G~D~IeIn~gc---------P~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~-~PV~vKiR~g-- 136 (350)
T 3b0p_A 69 PKSLAEAARIGEAFGYDEINLNLGC---------PSEKAQEGGYGACLLLDLARVREILKAMGEAVR-VPVTVKMRLG-- 136 (350)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEECC---------CSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCS-SCEEEEEESC--
T ss_pred HHHHHHHHHHHHHcCCCEEEECCcC---------CCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhC-CceEEEEecC--
Confidence 4899999999999999999999998 999999999999999999999999999999994 4899988742
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCC--CCchhHHHHHHHHHHHh-CCcEEEeC
Q 025135 104 HLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRP--GTEDEEAQLLRTWRRSY-QGTFICSG 180 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ir~~~-~~pvi~~G 180 (257)
+++. .+.++..++++.++++| +++|+++.+.... + .++.. ...+..+..+..+++.+ ++|||++|
T Consensus 137 ~~~~---~~~~~~~~~a~~l~~aG------~d~I~V~~r~~~~-g--~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianG 204 (350)
T 3b0p_A 137 LEGK---ETYRGLAQSVEAMAEAG------VKVFVVHARSALL-A--LSTKANREIPPLRHDWVHRLKGDFPQLTFVTNG 204 (350)
T ss_dssp BTTC---CCHHHHHHHHHHHHHTT------CCEEEEECSCBC-------------CCCCCHHHHHHHHHHCTTSEEEEES
T ss_pred cCcc---ccHHHHHHHHHHHHHcC------CCEEEEecCchhc-c--cCcccccCCCcccHHHHHHHHHhCCCCeEEEEC
Confidence 2221 34667889999999999 9999998754321 1 11100 01122356778899998 89999999
Q ss_pred CC-CHHHHHHHHHcCCCcEEEechHHhhCchHHHHHHcC
Q 025135 181 GF-TRELGIQALAEDGADLVAYGRLFISNPDLVLRFKLN 218 (257)
Q Consensus 181 ~i-t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~g 218 (257)
+| |+++++++|+ | ||+|++||+++.||+|+++++++
T Consensus 205 gI~s~eda~~~l~-G-aD~V~iGRa~l~~P~l~~~i~~~ 241 (350)
T 3b0p_A 205 GIRSLEEALFHLK-R-VDGVMLGRAVYEDPFVLEEADRR 241 (350)
T ss_dssp SCCSHHHHHHHHT-T-SSEEEECHHHHHCGGGGTTHHHH
T ss_pred CcCCHHHHHHHHh-C-CCEEEECHHHHhCcHHHHHHHHH
Confidence 99 9999999997 6 99999999999999999999853
No 22
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=99.95 E-value=6e-29 Score=224.15 Aligned_cols=158 Identities=16% Similarity=0.131 Sum_probs=132.4
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAID 103 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~ 103 (257)
.++|+++|++++++ ||+||||+|| |..|.|+|+|||+++||.+++.|+|++||++++ .+|++|+++ +
T Consensus 70 ~~~~~~aa~~a~~~-~d~Iein~gc---------P~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~-~pv~vKir~--G 136 (318)
T 1vhn_A 70 PNELSEAARILSEK-YKWIDLNAGC---------PVRKVVKEGAGGALLKDLRHFRYIVRELRKSVS-GKFSVKTRL--G 136 (318)
T ss_dssp HHHHHHHHHHHTTT-CSEEEEEECC---------CCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCS-SEEEEEEES--C
T ss_pred HHHHHHHHHHHHHh-CCEEEEECCC---------CcHhcCCCCcccchhhCHHHHHHHHHHHHHhhC-CCEEEEecC--C
Confidence 48999999999999 9999999998 999999999999999999999999999999997 589999996 2
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-
Q 025135 104 HLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF- 182 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i- 182 (257)
+.. ++..++++.+++.| +++|+++.+..... +...+. +..+..+++ ++|||++|+|
T Consensus 137 ~~~-------~~~~~~a~~l~~~G------~d~i~v~g~~~~~~-------~~~~~~-~~~i~~i~~--~ipVi~~GgI~ 193 (318)
T 1vhn_A 137 WEK-------NEVEEIYRILVEEG------VDEVFIHTRTVVQS-------FTGRAE-WKALSVLEK--RIPTFVSGDIF 193 (318)
T ss_dssp SSS-------CCHHHHHHHHHHTT------CCEEEEESSCTTTT-------TSSCCC-GGGGGGSCC--SSCEEEESSCC
T ss_pred CCh-------HHHHHHHHHHHHhC------CCEEEEcCCCcccc-------CCCCcC-HHHHHHHHc--CCeEEEECCcC
Confidence 221 11237899999999 99999986543211 111122 244555666 8999999999
Q ss_pred CHHHHHHHHHcCCCcEEEechHHhhCchHHHHHHc
Q 025135 183 TRELGIQALAEDGADLVAYGRLFISNPDLVLRFKL 217 (257)
Q Consensus 183 t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~ 217 (257)
|+++++++|++++||+|++||++++||+|+.++++
T Consensus 194 s~~da~~~l~~~gad~V~iGR~~l~~P~l~~~~~~ 228 (318)
T 1vhn_A 194 TPEDAKRALEESGCDGLLVARGAIGRPWIFKQIKD 228 (318)
T ss_dssp SHHHHHHHHHHHCCSEEEESGGGTTCTTHHHHHHH
T ss_pred CHHHHHHHHHcCCCCEEEECHHHHhCcchHHHHHH
Confidence 99999999997679999999999999999999987
No 23
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=99.90 E-value=2e-23 Score=189.09 Aligned_cols=168 Identities=15% Similarity=0.094 Sum_probs=131.1
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHh-------CC
Q 025135 19 EIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAI-------GA 91 (257)
Q Consensus 19 eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~v-------g~ 91 (257)
+|++++++|+++|+++.+ |||+||||++| |.+| |.....+.+++.|++++||+++ |+
T Consensus 147 ~i~~~~~~~~~aa~~~~~-g~d~iein~~s---------P~~~------g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~ 210 (336)
T 1f76_A 147 PVEQGKDDYLICMEKIYA-YAGYIAINISS---------PNTP------GLRTLQYGEALDDLLTAIKNKQNDLQAMHHK 210 (336)
T ss_dssp CGGGTHHHHHHHHHHHGG-GCSEEEEECCC---------SSST------TGGGGGSHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred cccccHHHHHHHHHHHhc-cCCEEEEEccC---------CCCC------CcccccCHHHHHHHHHHHHHHHHhhhhcccc
Confidence 456789999999999976 99999999876 8877 2222345899999999999999 54
Q ss_pred C-eEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCC------cCCCCCCCc---hhH
Q 025135 92 D-RVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQ------TESGRPGTE---DEE 161 (257)
Q Consensus 92 ~-~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~------~~~~~~~~~---~~~ 161 (257)
+ ||++|+++. .+.++..++++.+++.| +|+|+++......... ...+++.+. +..
T Consensus 211 ~~Pv~vKi~~~---------~~~~~~~~~a~~l~~~G------vd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~ 275 (336)
T 1f76_A 211 YVPIAVKIAPD---------LSEEELIQVADSLVRHN------IDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKS 275 (336)
T ss_dssp CCCEEEECCSC---------CCHHHHHHHHHHHHHTT------CSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHH
T ss_pred cCceEEEecCC---------CCHHHHHHHHHHHHHcC------CcEEEEeCCcccccccccccccccCCCcCCchhHHHH
Confidence 5 899999963 24567889999999999 9999998643211100 000111111 123
Q ss_pred HHHHHHHHHHh--CCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhh-CchHHHHHHcC
Q 025135 162 AQLLRTWRRSY--QGTFICSGGF-TRELGIQALAEDGADLVAYGRLFIS-NPDLVLRFKLN 218 (257)
Q Consensus 162 ~~~~~~ir~~~--~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~ia-dP~l~~k~~~g 218 (257)
...++.+++.+ ++|||++||| |++++.++|+.| ||+|++||+++. ||+|++|+++|
T Consensus 276 ~~~i~~i~~~~~~~ipVi~~GGI~~~~da~~~l~~G-Ad~V~igr~~l~~~P~~~~~i~~~ 335 (336)
T 1f76_A 276 TEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAG-ASLVQIYSGFIFKGPPLIKEIVTH 335 (336)
T ss_dssp HHHHHHHHHHHTTSSCEEEESSCCSHHHHHHHHHHT-CSEEEESHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHCC-CCEEEeeHHHHhcCcHHHHHHHhh
Confidence 46677899988 8999999999 899999999998 999999999998 99999999875
No 24
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=99.87 E-value=2.2e-21 Score=173.76 Aligned_cols=166 Identities=16% Similarity=0.162 Sum_probs=131.3
Q ss_pred HHHHHHHHHHHHHHcCCC-EEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccC
Q 025135 23 VIDQYRQAALNAIQAGFD-GIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPA 101 (257)
Q Consensus 23 ii~~f~~AA~~a~~aGfD-gVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~ 101 (257)
.+++|+++|+++.++||| +||||.+| |.+ ++.+.||+++++ +.|++++||++++ .||.+|+++.
T Consensus 104 ~~~~~~~~a~~~~~~g~d~~iein~~~---------P~~-~g~~~~g~~~e~----~~~iv~~vr~~~~-~Pv~vKi~~~ 168 (311)
T 1jub_A 104 SAAENIAMLKKIQESDFSGITELNLSC---------PNV-PGEPQLAYDFEA----TEKLLKEVFTFFT-KPLGVKLPPY 168 (311)
T ss_dssp SHHHHHHHHHHHHHSCCCSEEEEESCC---------CCS-SSCCCGGGCHHH----HHHHHHHHTTTCC-SCEEEEECCC
T ss_pred CHHHHHHHHHHHHhcCCCeEEEEeccC---------CCC-CCcccccCCHHH----HHHHHHHHHHhcC-CCEEEEECCC
Confidence 458999999999999999 99999887 888 688999988775 6899999999873 3899999963
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCc-----c---c-CCCc---CCCCCCC---chhHHHHHH
Q 025135 102 IDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRY-----T---A-YGQT---ESGRPGT---EDEEAQLLR 166 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~-----~---~-~~~~---~~~~~~~---~~~~~~~~~ 166 (257)
.+.++..++++.++++| +|+|+++.... + . +... ..+++++ .+.....++
T Consensus 169 ---------~~~~~~~~~a~~~~~~G------~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~ 233 (311)
T 1jub_A 169 ---------FDLVHFDIMAEILNQFP------LTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVR 233 (311)
T ss_dssp ---------CSHHHHHHHHHHHTTSC------CCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHH
T ss_pred ---------CCHHHHHHHHHHHHHcC------CcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHH
Confidence 23567788999999999 89998876431 1 0 0000 0001111 122356778
Q ss_pred HHHHHh--CCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhh-CchHHHHHHcCC
Q 025135 167 TWRRSY--QGTFICSGGF-TRELGIQALAEDGADLVAYGRLFIS-NPDLVLRFKLNA 219 (257)
Q Consensus 167 ~ir~~~--~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~ia-dP~l~~k~~~g~ 219 (257)
.+++.+ ++|||++||| |++++.++|+.| ||+|++||+++. +|+|+++++++.
T Consensus 234 ~v~~~~~~~ipvi~~GGI~~~~da~~~l~~G-Ad~V~vg~~~l~~~p~~~~~i~~~l 289 (311)
T 1jub_A 234 AFYTRLKPEIQIIGTGGIETGQDAFEHLLCG-ATMLQIGTALHKEGPAIFDRIIKEL 289 (311)
T ss_dssp HHHTTSCTTSEEEEESSCCSHHHHHHHHHHT-CSEEEECHHHHHHCTHHHHHHHHHH
T ss_pred HHHHhcCCCCCEEEECCCCCHHHHHHHHHcC-CCEEEEchHHHhcCcHHHHHHHHHH
Confidence 899988 8999999999 999999999988 999999999997 999999998764
No 25
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=99.85 E-value=9.9e-21 Score=169.75 Aligned_cols=167 Identities=13% Similarity=0.158 Sum_probs=131.2
Q ss_pred HHHHHHHHHHHHHHcCCC---EEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEc
Q 025135 23 VIDQYRQAALNAIQAGFD---GIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMS 99 (257)
Q Consensus 23 ii~~f~~AA~~a~~aGfD---gVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls 99 (257)
.+++|+++|+++.++||| +||||.+| |.+ +|.+.||+++++ +.|++++||++++ .||.+|++
T Consensus 104 ~~~~~~~~a~~~~~~g~d~~~~iein~~~---------P~~-~g~~~~g~~~~~----~~~ii~~vr~~~~-~Pv~vK~~ 168 (314)
T 2e6f_A 104 SVEENVAMVRRLAPVAQEKGVLLELNLSC---------PNV-PGKPQVAYDFEA----MRTYLQQVSLAYG-LPFGVKMP 168 (314)
T ss_dssp SHHHHHHHHHHHHHHHHHHCCEEEEECCC---------CCS-TTCCCGGGSHHH----HHHHHHHHHHHHC-SCEEEEEC
T ss_pred CHHHHHHHHHHHHHhCCCcCceEEEEcCC---------CCC-CCchhhcCCHHH----HHHHHHHHHHhcC-CCEEEEEC
Confidence 468999999999999999 99999887 888 689999988875 6899999999984 38999998
Q ss_pred cCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCc-----c----cCCC---cCCCCCCC---chhHHHH
Q 025135 100 PAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRY-----T----AYGQ---TESGRPGT---EDEEAQL 164 (257)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~-----~----~~~~---~~~~~~~~---~~~~~~~ 164 (257)
+. .+.++..++++.++++|. +|+|+++.... + .+.. ...+++.+ .+.....
T Consensus 169 ~~---------~~~~~~~~~a~~~~~aG~-----~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~ 234 (314)
T 2e6f_A 169 PY---------FDIAHFDTAAAVLNEFPL-----VKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALAN 234 (314)
T ss_dssp CC---------CCHHHHHHHHHHHHTCTT-----EEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHH
T ss_pred CC---------CCHHHHHHHHHHHHhcCC-----ceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHH
Confidence 63 235677889999999982 67887765331 1 0000 00001111 1233567
Q ss_pred HHHHHHHh-CCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhh-CchHHHHHHcCC
Q 025135 165 LRTWRRSY-QGTFICSGGF-TRELGIQALAEDGADLVAYGRLFIS-NPDLVLRFKLNA 219 (257)
Q Consensus 165 ~~~ir~~~-~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~ia-dP~l~~k~~~g~ 219 (257)
++.+++.+ ++|||++||| |++++.++|..| ||+|++||+++. +|+|+++++++.
T Consensus 235 i~~v~~~~~~ipvi~~GGI~~~~da~~~l~~G-Ad~V~ig~~~l~~~p~~~~~i~~~l 291 (314)
T 2e6f_A 235 VNAFYRRCPDKLVFGCGGVYSGEDAFLHILAG-ASMVQVGTALQEEGPGIFTRLEDEL 291 (314)
T ss_dssp HHHHHHHCTTSEEEEESSCCSHHHHHHHHHHT-CSSEEECHHHHHHCTTHHHHHHHHH
T ss_pred HHHHHHhcCCCCEEEECCCCCHHHHHHHHHcC-CCEEEEchhhHhcCcHHHHHHHHHH
Confidence 78899998 8999999999 899999999998 999999999997 999999999775
No 26
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=99.84 E-value=2.5e-21 Score=172.91 Aligned_cols=164 Identities=13% Similarity=0.113 Sum_probs=127.1
Q ss_pred HHHHHHHHHHHHH-cCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCC
Q 025135 24 IDQYRQAALNAIQ-AGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAI 102 (257)
Q Consensus 24 i~~f~~AA~~a~~-aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~ 102 (257)
+++|.++|+++.+ +|||+||||.+| |.+|+|.+.||+ +.+++.|++++||++++ .+|.+|+++.
T Consensus 110 ~~~~~~~a~~~~~~~g~d~iei~~~~---------p~~~~g~~~~g~----~~~~~~eii~~v~~~~~-~pv~vk~~~~- 174 (311)
T 1ep3_A 110 EADYVAVCAKIGDAANVKAIELNISC---------PNVKHGGQAFGT----DPEVAAALVKACKAVSK-VPLYVKLSPN- 174 (311)
T ss_dssp HHHHHHHHHHHTTSTTEEEEEEECCS---------EEGGGTTEEGGG----CHHHHHHHHHHHHHHCS-SCEEEEECSC-
T ss_pred HHHHHHHHHHHhccCCCCEEEEeCCC---------CCCCCchhhhcC----CHHHHHHHHHHHHHhcC-CCEEEEECCC-
Confidence 6789999999998 999999999766 889999888885 57899999999999985 3899999853
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccC--CCcC-------CCCCCCch---hHHHHHHHHHH
Q 025135 103 DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAY--GQTE-------SGRPGTED---EEAQLLRTWRR 170 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~--~~~~-------~~~~~~~~---~~~~~~~~ir~ 170 (257)
+ .+..++++.++++| +|+|+++....... .... .+.+.... .....++.+++
T Consensus 175 -~---------~~~~~~a~~l~~~G------~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~ 238 (311)
T 1ep3_A 175 -V---------TDIVPIAKAVEAAG------ADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQ 238 (311)
T ss_dssp -S---------SCSHHHHHHHHHTT------CSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHT
T ss_pred -h---------HHHHHHHHHHHHcC------CCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHH
Confidence 1 11246788999999 99999864211000 0000 00011111 12456778888
Q ss_pred HhCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCchHHHHHHcCC
Q 025135 171 SYQGTFICSGGF-TRELGIQALAEDGADLVAYGRLFISNPDLVLRFKLNA 219 (257)
Q Consensus 171 ~~~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~g~ 219 (257)
.+++|||++||| +++++.++++.| ||+|++||+++.+|+++++++++.
T Consensus 239 ~~~ipvia~GGI~~~~d~~~~l~~G-Ad~V~vg~~~l~~p~~~~~i~~~l 287 (311)
T 1ep3_A 239 DVDIPIIGMGGVANAQDVLEMYMAG-ASAVAVGTANFADPFVCPKIIDKL 287 (311)
T ss_dssp TCSSCEEECSSCCSHHHHHHHHHHT-CSEEEECTHHHHCTTHHHHHHHHH
T ss_pred hcCCCEEEECCcCCHHHHHHHHHcC-CCEEEECHHHHcCcHHHHHHHHHH
Confidence 889999999999 899999999998 999999999999999999998764
No 27
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=99.81 E-value=4e-19 Score=166.10 Aligned_cols=167 Identities=12% Similarity=0.088 Sum_probs=128.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcC-CcCCCCCCchhhHhhHHHHHHHHHHHHh---------
Q 025135 20 IPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGIN-DRTDEYGGSIENRCRFLMQLVREVIVAI--------- 89 (257)
Q Consensus 20 I~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N-~R~D~yGGs~enR~r~~~eiv~aiR~~v--------- 89 (257)
+++.+++|+++|+++.+ ++|+||||.+| |+++ .|.++ ..+++.+|+++||+++
T Consensus 192 ~~~~~~dy~~~a~~l~~-~aD~ieiNisc---------Pnt~Glr~lq-------~~~~l~~il~~v~~~~~~~~~~~~~ 254 (443)
T 1tv5_A 192 TVNIVDDLKYCINKIGR-YADYIAINVSS---------PNTPGLRDNQ-------EAGKLKNIILSVKEEIDNLEKNNIM 254 (443)
T ss_dssp CSCHHHHHHHHHHHHGG-GCSEEEEECCC---------TTSTTGGGGG-------SHHHHHHHHHHHHHHHHHHC-----
T ss_pred chHHHHHHHHHHHHHhc-CCCEEEEeccC---------CCCccccccc-------CHHHHHHHHHHHHHHHhhhcccCcc
Confidence 34678999999998876 89999999999 9886 23333 3578999999999864
Q ss_pred ---------------------------------------CCC-e-EEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCC
Q 025135 90 ---------------------------------------GAD-R-VGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQI 128 (257)
Q Consensus 90 ---------------------------------------g~~-~-v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~ 128 (257)
+.+ | |++||++. .+.++..++|+.+++.|
T Consensus 255 ~~g~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~vKispd---------~~~ed~~~iA~~~~~aG- 324 (443)
T 1tv5_A 255 NDESTYNEDNKIVEKKNNFNKNNSHMMKDAKDNFLWFNTTKKKPLVFVKLAPD---------LNQEQKKEIADVLLETN- 324 (443)
T ss_dssp ---------------------------------CCCCSSSSSCCEEEEEECSC---------CCHHHHHHHHHHHHHTT-
T ss_pred ccccCHHHHHHHHHHhhcccccchhhhhhhhhcchhcccCCCCCeEEEEeCCC---------CCHHHHHHHHHHHHHcC-
Confidence 123 7 99999974 23567889999999999
Q ss_pred ccCCceeEEEeeCCCcccCCC----cCCCCCCCch---hHHHHHHHHHHHh--CCcEEEeCCC-CHHHHHHHHHcCCCcE
Q 025135 129 DQGAKLTYLHVTQPRYTAYGQ----TESGRPGTED---EEAQLLRTWRRSY--QGTFICSGGF-TRELGIQALAEDGADL 198 (257)
Q Consensus 129 ~~~~~vd~i~v~~~~~~~~~~----~~~~~~~~~~---~~~~~~~~ir~~~--~~pvi~~G~i-t~~~a~~~l~~g~~D~ 198 (257)
+|+|.++......... ...+++++.+ .....++.+++.+ ++|||++||| |+++|.++|+.| ||+
T Consensus 325 -----aDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~DA~e~l~aG-Ad~ 398 (443)
T 1tv5_A 325 -----IDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAG-ASV 398 (443)
T ss_dssp -----CSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHTT-EEE
T ss_pred -----CCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEECCCCCHHHHHHHHHcC-CCE
Confidence 9999998754421110 0011121222 1346678899998 8999999999 999999999998 999
Q ss_pred EEechHHhh-CchHHHHHHcCC
Q 025135 199 VAYGRLFIS-NPDLVLRFKLNA 219 (257)
Q Consensus 199 V~igR~~ia-dP~l~~k~~~g~ 219 (257)
|++||+++. +|+|+++++++.
T Consensus 399 Vqigrall~~gP~l~~~i~~~l 420 (443)
T 1tv5_A 399 CQLYSCLVFNGMKSAVQIKREL 420 (443)
T ss_dssp EEESHHHHHHGGGHHHHHHHHH
T ss_pred EEEcHHHHhcChHHHHHHHHHH
Confidence 999999997 999999999775
No 28
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=99.76 E-value=1.3e-17 Score=151.88 Aligned_cols=166 Identities=13% Similarity=0.118 Sum_probs=123.5
Q ss_pred HHHHHHHHHHHH---HcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEcc
Q 025135 24 IDQYRQAALNAI---QAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSP 100 (257)
Q Consensus 24 i~~f~~AA~~a~---~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~ 100 (257)
+++|+++|+++. ++|+|+||||.+| |++.. |..+......+.+++++||+++.. ||.|||++
T Consensus 138 ~~d~~~~a~~l~~~~~~g~d~ielNisC---------Pn~~g-----g~~l~~~~e~~~~il~av~~~~~~-PV~vKi~p 202 (354)
T 4ef8_A 138 MRENVEMCKRLAAVATEKGVILELNLSC---------PNVPG-----KPQVAYDFDAMRQCLTAVSEVYPH-SFGVKMPP 202 (354)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEECSS---------CCSTT-----SCCGGGSHHHHHHHHHHHHHHCCS-CEEEEECC
T ss_pred HHHHHHHHHHHhhhhhcCCCEEEEeCCC---------CCCCC-----chhhccCHHHHHHHHHHHHHhhCC-CeEEEecC
Confidence 578999999988 6899999999999 87631 334555667889999999999854 99999997
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCC-----cc----cCC---CcCCCCCCCc---hhHHHHH
Q 025135 101 AIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPR-----YT----AYG---QTESGRPGTE---DEEAQLL 165 (257)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~-----~~----~~~---~~~~~~~~~~---~~~~~~~ 165 (257)
. .+.++..++++.+++.|. +|.|.+++.. .+ ... ....++++++ +..+..+
T Consensus 203 ~---------~d~~~~~~~a~~~~~~Gg-----~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i 268 (354)
T 4ef8_A 203 Y---------FDFAHFDAAAEILNEFPK-----VQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANI 268 (354)
T ss_dssp C---------CSHHHHHHHHHHHHTCTT-----EEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHH
T ss_pred C---------CCHHHHHHHHHHHHhCCC-----ccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHH
Confidence 4 135566778888888851 6777654321 00 000 0000111122 3345677
Q ss_pred HHHHHHh-CCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhC-chHHHHHHcCC
Q 025135 166 RTWRRSY-QGTFICSGGF-TRELGIQALAEDGADLVAYGRLFISN-PDLVLRFKLNA 219 (257)
Q Consensus 166 ~~ir~~~-~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~iad-P~l~~k~~~g~ 219 (257)
+.+++.. ++|||++||| |.+++.++|..| ||+|++||+++.| |+++++++++.
T Consensus 269 ~~v~~~~~~ipII~~GGI~s~~da~~~l~aG-Ad~V~vgra~l~~GP~~~~~i~~~l 324 (354)
T 4ef8_A 269 NAFYRRCPGKLIFGCGGVYTGEDAFLHVLAG-ASMVQVGTALQEEGPSIFERLTSEL 324 (354)
T ss_dssp HHHHHHCTTSEEEEESCCCSHHHHHHHHHHT-EEEEEECHHHHHHCTTHHHHHHHHH
T ss_pred HHHHHhCCCCCEEEECCcCCHHHHHHHHHcC-CCEEEEhHHHHHhCHHHHHHHHHHH
Confidence 8888886 6999999999 999999999987 9999999999999 99999998764
No 29
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=99.76 E-value=1.1e-17 Score=152.05 Aligned_cols=164 Identities=13% Similarity=0.173 Sum_probs=116.6
Q ss_pred HHHHHHHHHHHHHcCCC-EEEecccccchhhhcCCCCcCCcCCCCCC-chhhHhhHHHHHHHHHHHHhCCCeEEEEEccC
Q 025135 24 IDQYRQAALNAIQAGFD-GIEIHGAHGYLIDQFLKDGINDRTDEYGG-SIENRCRFLMQLVREVIVAIGADRVGVRMSPA 101 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfD-gVEIh~a~GyLl~qFlSp~~N~R~D~yGG-s~enR~r~~~eiv~aiR~~vg~~~v~vrls~~ 101 (257)
+++|+++|+++.++|+| +||||.+| |+++ |+ .+......+.+|+++||+++.. ||.|||+++
T Consensus 140 ~~d~~~~a~~l~~~g~~d~ielNisC---------Pn~~------G~~~l~~~~e~l~~il~av~~~~~~-PV~vKi~p~ 203 (345)
T 3oix_A 140 PEETHTILXMVEASKYQGLVELNLSC---------PNVP------GXPQIAYDFETTDQILSEVFTYFTK-PLGIKLPPY 203 (345)
T ss_dssp HHHHHHHHHHHHHSSCCSEEEEECSC---------CCST------TCCCGGGCHHHHHHHHHHHTTTCCS-CEEEEECCC
T ss_pred HHHHHHHHHHHhccCCCcEEEEecCC---------CCcC------CchhhcCCHHHHHHHHHHHHHHhCC-CeEEEECCC
Confidence 68999999999999998 99999999 8764 33 4545567889999999998853 999999974
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEee----------CCCcccCCCcCCCCCCCch---hHHHHHHHH
Q 025135 102 IDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVT----------QPRYTAYGQTESGRPGTED---EEAQLLRTW 168 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~----------~~~~~~~~~~~~~~~~~~~---~~~~~~~~i 168 (257)
.+.. ++++.++.+|.+. +++++.+ ............+++++.+ ..+..++.+
T Consensus 204 ---------~~~~---~~a~~~~~aga~~---i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i 268 (345)
T 3oix_A 204 ---------FDIV---HFDQAAAIFNXYP---LTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAF 268 (345)
T ss_dssp ---------CCHH---HHHHHHHHHTTSC---CSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHH
T ss_pred ---------CCHH---HHHHHHHHhCCCc---eEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHH
Confidence 1233 3455555554211 5544322 1111000000001111222 234677889
Q ss_pred HHHh--CCcEEEeCCC-CHHHHHHHHHcCCCcEEEechH-HhhCchHHHHHHcCC
Q 025135 169 RRSY--QGTFICSGGF-TRELGIQALAEDGADLVAYGRL-FISNPDLVLRFKLNA 219 (257)
Q Consensus 169 r~~~--~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~-~iadP~l~~k~~~g~ 219 (257)
++.+ ++|||++||| |++++.++|+.| ||+|++||+ ++.+|+|+++++++.
T Consensus 269 ~~~~~~~ipIIg~GGI~s~~da~~~l~aG-Ad~V~igra~~~~gP~~~~~i~~~L 322 (345)
T 3oix_A 269 YKRLNPSIQIIGTGGVXTGRDAFEHILCG-ASMVQIGTALHQEGPQIFKRITKEL 322 (345)
T ss_dssp HTTSCTTSEEEEESSCCSHHHHHHHHHHT-CSEEEESHHHHHHCTHHHHHHHHHH
T ss_pred HHHcCCCCcEEEECCCCChHHHHHHHHhC-CCEEEEChHHHhcChHHHHHHHHHH
Confidence 9998 6999999999 999999999988 999999999 789999999998764
No 30
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.76 E-value=6.8e-18 Score=172.65 Aligned_cols=166 Identities=13% Similarity=0.096 Sum_probs=125.8
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAID 103 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~ 103 (257)
.++|.++|+++.++|||+||||++| |.+ .+.+.||+++.++.+++.+++++||++++ .||.+|+++.
T Consensus 647 ~~~~~~~a~~~~~~g~d~iein~~~---------P~~-~~~~~~G~~~~~~~~~~~~iv~~v~~~~~-~Pv~vK~~~~-- 713 (1025)
T 1gte_A 647 KNDWMELSRKAEASGADALELNLSC---------PHG-MGERGMGLACGQDPELVRNICRWVRQAVQ-IPFFAKLTPN-- 713 (1025)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCC---------BCC-CC-----SBGGGCHHHHHHHHHHHHHHCS-SCEEEEECSC--
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCC---------CCC-CCCCCcccccccCHHHHHHHHHHHHHhhC-CceEEEeCCC--
Confidence 5789999999999999999999988 877 67889999999999999999999999984 3899999863
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCccc---------------CCCcCCCCCCCchhH---HHHH
Q 025135 104 HLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTA---------------YGQTESGRPGTEDEE---AQLL 165 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~---------------~~~~~~~~~~~~~~~---~~~~ 165 (257)
.++..++++.+++.| +|+|++++..... .+....+++.+.+.+ ...+
T Consensus 714 ---------~~~~~~~a~~~~~~G------~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v 778 (1025)
T 1gte_A 714 ---------VTDIVSIARAAKEGG------ADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAV 778 (1025)
T ss_dssp ---------SSCHHHHHHHHHHHT------CSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHH
T ss_pred ---------hHHHHHHHHHHHHcC------CCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHH
Confidence 113567899999999 8999885321000 000011111122222 3567
Q ss_pred HHHHHHh-CCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhh-CchHHHHHHcC
Q 025135 166 RTWRRSY-QGTFICSGGF-TRELGIQALAEDGADLVAYGRLFIS-NPDLVLRFKLN 218 (257)
Q Consensus 166 ~~ir~~~-~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~ia-dP~l~~k~~~g 218 (257)
..+++.+ ++|||++||| |++++.++|..| +|+|++||+++. +|.+++++.++
T Consensus 779 ~~v~~~~~~ipvi~~GGI~s~~da~~~l~~G-a~~v~vg~~~l~~~~~~~~~~~~~ 833 (1025)
T 1gte_A 779 TTIARALPGFPILATGGIDSAESGLQFLHSG-ASVLQVCSAVQNQDFTVIQDYCTG 833 (1025)
T ss_dssp HHHHHHSTTCCEEEESSCCSHHHHHHHHHTT-CSEEEESHHHHTSCTTHHHHHHHH
T ss_pred HHHHHHcCCCCEEEecCcCCHHHHHHHHHcC-CCEEEEeeccccCCccHHHHHHHH
Confidence 7888888 8999999999 999999999976 999999999997 88898888755
No 31
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=99.74 E-value=5.6e-17 Score=148.53 Aligned_cols=165 Identities=16% Similarity=0.102 Sum_probs=123.2
Q ss_pred HHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHh------CCCeEEE
Q 025135 23 VIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAI------GADRVGV 96 (257)
Q Consensus 23 ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~v------g~~~v~v 96 (257)
-+++|+++|+.+.+ ++|+||||.+| |++. |+.+......+.+++++|+++. .+.||.|
T Consensus 162 ~~~dy~~~~~~~~~-~ad~ielNisC---------Pn~~------G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~v 225 (367)
T 3zwt_A 162 AAEDYAEGVRVLGP-LADYLVVNVSS---------PNTA------GLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLV 225 (367)
T ss_dssp HHHHHHHHHHHHGG-GCSEEEEECCC---------TTST------TGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEE
T ss_pred CHHHHHHHHHHHhh-hCCEEEEECCC---------CCCC------CccccCCHHHHHHHHHHHHHHHhhccccCCceEEE
Confidence 46889998888764 68999999999 8652 3333333567889999998762 1238999
Q ss_pred EEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCC------cCCCCCCCch---hHHHHHHH
Q 025135 97 RMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQ------TESGRPGTED---EEAQLLRT 167 (257)
Q Consensus 97 rls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~------~~~~~~~~~~---~~~~~~~~ 167 (257)
||++. .+.++..++++.++++| +|.|++++........ ...++.++.+ .....++.
T Consensus 226 Ki~p~---------~~~~~~~~ia~~~~~aG------adgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~ 290 (367)
T 3zwt_A 226 KIAPD---------LTSQDKEDIASVVKELG------IDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIRE 290 (367)
T ss_dssp EECSC---------CCHHHHHHHHHHHHHHT------CCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHH
T ss_pred EeCCC---------CCHHHHHHHHHHHHHcC------CCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHH
Confidence 99974 24567889999999999 9999988654221100 0011122222 23467788
Q ss_pred HHHHh--CCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHh-hCchHHHHHHcCC
Q 025135 168 WRRSY--QGTFICSGGF-TRELGIQALAEDGADLVAYGRLFI-SNPDLVLRFKLNA 219 (257)
Q Consensus 168 ir~~~--~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~i-adP~l~~k~~~g~ 219 (257)
+++.+ ++|||++||| |+++|.++|+.| ||+|++||+++ .+|+|++++.++.
T Consensus 291 i~~~v~~~ipvI~~GGI~s~~da~~~l~~G-Ad~V~vgra~l~~gP~~~~~i~~~l 345 (367)
T 3zwt_A 291 MYALTQGRVPIIGVGGVSSGQDALEKIRAG-ASLVQLYTALTFWGPPVVGKVKREL 345 (367)
T ss_dssp HHHHTTTCSCEEEESSCCSHHHHHHHHHHT-CSEEEESHHHHHHCTHHHHHHHHHH
T ss_pred HHHHcCCCceEEEECCCCCHHHHHHHHHcC-CCEEEECHHHHhcCcHHHHHHHHHH
Confidence 99999 7999999999 999999999987 99999999996 5799999998764
No 32
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=99.72 E-value=7.7e-17 Score=149.52 Aligned_cols=143 Identities=15% Similarity=0.169 Sum_probs=120.2
Q ss_pred HHHHHHHHHHHHHcCCCEEEeccc----ccchhhhcCCCCcCCcCCCCCCchh-hHhhHHHHHHHHHHHHhCCC-eEEEE
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGA----HGYLIDQFLKDGINDRTDEYGGSIE-NRCRFLMQLVREVIVAIGAD-RVGVR 97 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a----~GyLl~qFlSp~~N~R~D~yGGs~e-nR~r~~~eiv~aiR~~vg~~-~v~vr 97 (257)
+++|+++|++++++||++|+||.. |||+ |+||.+|+ +|||+.+ +++++..|+|++||+++|++ +|.+.
T Consensus 151 ~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~---~~~~~~~~---~~GG~~~~~~~~~~~e~v~avR~a~G~d~~l~vD 224 (410)
T 2gl5_A 151 PEEYAEAARAALDDGYDAIKVDPLEIDRNGDD---CVFQNRNR---NYSGLLLADQLKMGEARIAAMREAMGDDADIIVE 224 (410)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECSSSBCTTSCB---TTTSSCCG---GGGSCCCHHHHHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEeccccCCcccc---cccccccc---cccCccchhHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 567899999999999999999975 7887 88888876 7999986 79999999999999999987 67777
Q ss_pred EccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEE
Q 025135 98 MSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFI 177 (257)
Q Consensus 98 ls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi 177 (257)
.+. . .+.++++++++.|++.+ ++|++ +|. .+.....++.+++.+++||+
T Consensus 225 an~--~-------~~~~~ai~~~~~l~~~~------i~~iE--~P~--------------~~~~~~~~~~l~~~~~iPIa 273 (410)
T 2gl5_A 225 IHS--L-------LGTNSAIQFAKAIEKYR------IFLYE--EPI--------------HPLNSDNMQKVSRSTTIPIA 273 (410)
T ss_dssp CTT--C-------SCHHHHHHHHHHHGGGC------EEEEE--CSS--------------CSSCHHHHHHHHHHCSSCEE
T ss_pred CCC--C-------CCHHHHHHHHHHHHhcC------CCeEE--CCC--------------ChhhHHHHHHHHhhCCCCEE
Confidence 653 1 35788999999999999 89887 441 11234567789999999999
Q ss_pred EeCCC-CHHHHHHHHHcCCCcEEEech
Q 025135 178 CSGGF-TRELGIQALAEDGADLVAYGR 203 (257)
Q Consensus 178 ~~G~i-t~~~a~~~l~~g~~D~V~igR 203 (257)
+.+.+ ++++++++++++.+|+|.+--
T Consensus 274 ~dE~~~~~~~~~~~i~~~~~d~v~ik~ 300 (410)
T 2gl5_A 274 TGERSYTRWGYRELLEKQSIAVAQPDL 300 (410)
T ss_dssp ECTTCCTTHHHHHHHHTTCCSEECCCT
T ss_pred ecCCcCCHHHHHHHHHcCCCCEEecCc
Confidence 99998 899999999999999998843
No 33
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=99.72 E-value=6.4e-17 Score=149.57 Aligned_cols=166 Identities=13% Similarity=0.097 Sum_probs=123.6
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhC-----------
Q 025135 22 EVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIG----------- 90 (257)
Q Consensus 22 ~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg----------- 90 (257)
+.+++|+++++++.+. +|.||||.+| |++. |-.+......+.+|+++|++++.
T Consensus 196 ~~~~Dy~~~a~~l~~~-ad~ieiNiSc---------PNt~------Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~ 259 (415)
T 3i65_A 196 NIVDDLKYCINKIGRY-ADYIAINVSS---------PNTP------GLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDE 259 (415)
T ss_dssp CHHHHHHHHHHHHGGG-CSEEEEECCC---------CC--------------CCHHHHHHHHHHHHHHHHHHHHCCSCHH
T ss_pred ccHHHHHHHHHHHHhh-CCEEEEECCC---------CCCC------CcccccCHHHHHHHHHHHHHHHHhhccccccccc
Confidence 3578999999998776 9999999999 8763 33333445788999999998741
Q ss_pred --------CCe-EEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCC----cCCCCCCC
Q 025135 91 --------ADR-VGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQ----TESGRPGT 157 (257)
Q Consensus 91 --------~~~-v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~----~~~~~~~~ 157 (257)
..| |.|||+++ .+.++..++++.++++| +|.|.+++........ ...+++++
T Consensus 260 ~~~~~~~~~~P~V~VKi~pd---------~~~~~i~~iA~~a~~aG------aDgIiv~Ntt~~r~dl~~~~~~~GGlSG 324 (415)
T 3i65_A 260 FLWFNTTKKKPLVFVKLAPD---------LNQEQKKEIADVLLETN------IDGMIISNTTTQINDIKSFENKKGGVSG 324 (415)
T ss_dssp HHCCSSSSSCCEEEEEECSC---------CCHHHHHHHHHHHHHHT------CSEEEECCCBSCCCCCGGGTTCCSEEEE
T ss_pred ccccccCCCCCeEEEEecCC---------CCHHHHHHHHHHHHHcC------CcEEEEeCCCcccccccccccccCCcCC
Confidence 237 89999974 24567789999999999 8999988754321100 00122222
Q ss_pred ch---hHHHHHHHHHHHh--CCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhC-chHHHHHHcCC
Q 025135 158 ED---EEAQLLRTWRRSY--QGTFICSGGF-TRELGIQALAEDGADLVAYGRLFISN-PDLVLRFKLNA 219 (257)
Q Consensus 158 ~~---~~~~~~~~ir~~~--~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~iad-P~l~~k~~~g~ 219 (257)
.+ .....++.+++.+ ++|||++||| |.++|.++|..| ||+|++||+++.+ |+++++++++.
T Consensus 325 ~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~eDa~e~l~aG-Ad~VqIgra~l~~GP~~~~~i~~~L 392 (415)
T 3i65_A 325 AKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAG-ASVCQLYSCLVFNGMKSAVQIKREL 392 (415)
T ss_dssp GGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSHHHHHHHHHHT-EEEEEESHHHHHHGGGHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHcC-CCEEEEcHHHHhcCHHHHHHHHHHH
Confidence 22 2346677889988 6999999999 999999999987 9999999999988 99999998764
No 34
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=99.72 E-value=6.9e-17 Score=149.05 Aligned_cols=141 Identities=10% Similarity=0.123 Sum_probs=119.0
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAI 102 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~ 102 (257)
+++|+++|++++++||++|+||.+||||.++ +| |. .||||.++++++..|+|++||+++|++ +|.++.+.
T Consensus 138 ~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~-----~~-~~-~~gg~~~~~~~~~~e~v~avr~a~G~d~~l~vD~n~-- 208 (392)
T 2poz_A 138 PDEFARAVERPLKEGYGALKFYPLAQRVGSA-----LQ-HV-TRRSMSAEAIELAYRRVKAVRDAAGPEIELMVDLSG-- 208 (392)
T ss_dssp HHHHHHHTHHHHHTTCSEEEECCCCEEETTE-----EE-CC-BTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTT--
T ss_pred HHHHHHHHHHHHHcCCCEEEEeccccccccc-----cc-cc-ccCCcchhhHHHHHHHHHHHHHhcCCCCEEEEECCC--
Confidence 4668899999999999999999999999553 46 54 999999999999999999999999987 67777663
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC
Q 025135 103 DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF 182 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i 182 (257)
. .+.++++++++.|++.+ ++|++ +|. .+.....++.+++.+++||++.+.+
T Consensus 209 ~-------~~~~~a~~~~~~l~~~~------i~~iE--~P~--------------~~~~~~~~~~l~~~~~ipIa~dE~~ 259 (392)
T 2poz_A 209 G-------LTTDETIRFCRKIGELD------ICFVE--EPC--------------DPFDNGALKVISEQIPLPIAVGERV 259 (392)
T ss_dssp C-------SCHHHHHHHHHHHGGGC------EEEEE--CCS--------------CTTCHHHHHHHHHHCSSCEEECTTC
T ss_pred C-------CCHHHHHHHHHHHHhcC------CCEEE--CCC--------------CcccHHHHHHHHhhCCCCEEecCCc
Confidence 1 35788999999999999 89887 441 1223456778999999999999998
Q ss_pred -CHHHHHHHHHcCCCcEEEec
Q 025135 183 -TRELGIQALAEDGADLVAYG 202 (257)
Q Consensus 183 -t~~~a~~~l~~g~~D~V~ig 202 (257)
++++++++++++.+|+|.+-
T Consensus 260 ~~~~~~~~~i~~~~~d~v~ik 280 (392)
T 2poz_A 260 YTRFGFRKIFELQACGIIQPD 280 (392)
T ss_dssp CHHHHHHHHHTTTCCSEECCC
T ss_pred CCHHHHHHHHHcCCCCEEecC
Confidence 89999999999999999984
No 35
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=99.62 E-value=7.8e-15 Score=135.86 Aligned_cols=138 Identities=16% Similarity=0.155 Sum_probs=115.0
Q ss_pred HHHHHHHHHHHHHcCCCEEEeccc----ccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEE
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGA----HGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRM 98 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a----~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrl 98 (257)
+++|+++|++++++||++|+||.. |||+ |+||..| +| .++++++..|+|++||+++|++ +|.++.
T Consensus 153 ~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~---~~s~~~~--~~-----~~~~~~~~~e~v~avR~a~G~d~~l~vDa 222 (407)
T 2o56_A 153 PEQYAQAALTAVSEGYDAIKVDTVAMDRHGNW---NQQNLNG--PL-----TDKILRLGYDRMAAIRDAVGPDVDIIAEM 222 (407)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCSSBCTTSCB---SCSCCCS--SC-----CHHHHHHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEEcccccCCcCcc---ccCcccC--CC-----chhHHHHHHHHHHHHHHhcCCCCEEEEEC
Confidence 567899999999999999999985 4886 8998877 33 2789999999999999999987 688777
Q ss_pred ccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEE
Q 025135 99 SPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFIC 178 (257)
Q Consensus 99 s~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~ 178 (257)
+. . .+.++++++++.|++.+ ++|++ +|. .+.....++.+++.+++||++
T Consensus 223 n~--~-------~~~~~a~~~~~~l~~~~------i~~iE--~P~--------------~~~~~~~~~~l~~~~~iPIa~ 271 (407)
T 2o56_A 223 HA--F-------TDTTSAIQFGRMIEELG------IFYYE--EPV--------------MPLNPAQMKQVADKVNIPLAA 271 (407)
T ss_dssp TT--C-------SCHHHHHHHHHHHGGGC------CSCEE--CSS--------------CSSSHHHHHHHHHHCCSCEEE
T ss_pred CC--C-------CCHHHHHHHHHHHHhcC------CCEEe--CCC--------------ChhhHHHHHHHHHhCCCCEEe
Confidence 63 1 35788999999999999 88886 441 112346678899999999999
Q ss_pred eCCC-CHHHHHHHHHcCCCcEEEec
Q 025135 179 SGGF-TRELGIQALAEDGADLVAYG 202 (257)
Q Consensus 179 ~G~i-t~~~a~~~l~~g~~D~V~ig 202 (257)
.+.+ ++++++++++++.+|+|.+=
T Consensus 272 dE~~~~~~~~~~~i~~~~~d~v~ik 296 (407)
T 2o56_A 272 GERIYWRWGYRPFLENGSLSVIQPD 296 (407)
T ss_dssp CTTCCHHHHHHHHHHTTCCSEECCC
T ss_pred CCCcCCHHHHHHHHHcCCCCEEecC
Confidence 9998 89999999999999999874
No 36
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=99.61 E-value=1.7e-14 Score=133.43 Aligned_cols=141 Identities=13% Similarity=0.137 Sum_probs=115.6
Q ss_pred HHHHHHHHHHHHHcCCCEEEeccc----ccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEE
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGA----HGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRM 98 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a----~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrl 98 (257)
+++|+++|++++++||++|+||.. |||+ |+||..|. | .+++.++..|+|++||+++|++ +|.+..
T Consensus 147 ~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~---~~s~~~g~--~-----~~~~~~~~~e~v~avr~avG~d~~l~vDa 216 (403)
T 2ox4_A 147 KEEYAEEALKAVAEGYDAVKVDVLAHDRNGSR---EGVFLEGP--L-----PSETIKIGVERVEAIRNAVGPDVDIIVEN 216 (403)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCSSSCTTSCC---TTCCCSSS--C-----CHHHHHHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEEeccccCCcccc---ccCcccCC--C-----chHHHHHHHHHHHHHHHHhCCCCeEEEEC
Confidence 466889999999999999999975 6885 99988772 2 3789999999999999999987 677776
Q ss_pred ccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEE
Q 025135 99 SPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFIC 178 (257)
Q Consensus 99 s~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~ 178 (257)
+. . .+.++++++++.|++.+ ++|++ +|. .+.....++.+++.+++||++
T Consensus 217 n~--~-------~~~~~ai~~~~~l~~~~------i~~iE--~P~--------------~~~d~~~~~~l~~~~~iPIa~ 265 (403)
T 2ox4_A 217 HG--H-------TDLVSAIQFAKAIEEFN------IFFYE--EIN--------------TPLNPRLLKEAKKKIDIPLAS 265 (403)
T ss_dssp TT--C-------SCHHHHHHHHHHHGGGC------EEEEE--CCS--------------CTTSTHHHHHHHHTCCSCEEE
T ss_pred CC--C-------CCHHHHHHHHHHHHhhC------CCEEe--CCC--------------ChhhHHHHHHHHHhCCCCEEe
Confidence 53 1 35788999999999999 89887 441 112245667899999999999
Q ss_pred eCCC-CHHHHHHHHHcCCCcEEEechHH
Q 025135 179 SGGF-TRELGIQALAEDGADLVAYGRLF 205 (257)
Q Consensus 179 ~G~i-t~~~a~~~l~~g~~D~V~igR~~ 205 (257)
.+.+ ++++++++|+++.+|+|.+--..
T Consensus 266 dE~~~~~~~~~~~i~~~~~d~v~ik~~~ 293 (403)
T 2ox4_A 266 GERIYSRWGFLPFLEDRSIDVIQPDLGT 293 (403)
T ss_dssp CTTCCHHHHHHHHHHTTCCSEECCCHHH
T ss_pred cCCcCCHHHHHHHHHcCCCCEEecCccc
Confidence 9998 89999999999999999985443
No 37
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=99.55 E-value=7.6e-14 Score=129.41 Aligned_cols=137 Identities=21% Similarity=0.263 Sum_probs=112.7
Q ss_pred HHHHHHHHHHHHHHcCCCEEEeccc--ccchhhhcCCCCcCCcCCCCCCchh--hHhhHHHHHHHHHHHHhCCC-eEEEE
Q 025135 23 VIDQYRQAALNAIQAGFDGIEIHGA--HGYLIDQFLKDGINDRTDEYGGSIE--NRCRFLMQLVREVIVAIGAD-RVGVR 97 (257)
Q Consensus 23 ii~~f~~AA~~a~~aGfDgVEIh~a--~GyLl~qFlSp~~N~R~D~yGGs~e--nR~r~~~eiv~aiR~~vg~~-~v~vr 97 (257)
.+++|+++|++++++||++|+||.+ +|++.+ | |||+++ +++++..|+|++||+++|++ +|.+.
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~----~--------~~G~~~~~~~~~~~~e~v~avRea~G~d~~l~vD 216 (410)
T 2qq6_A 149 SNEEYIAVAREAVERGFDAIKLDVDDITGPLHR----D--------FWNGAISPREHEAMVARVAAVREAVGPEVEVAID 216 (410)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSSTTCS----C--------SSSCCCCHHHHHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEeeccccCCcccC----C--------cCccccchhhHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 4588999999999999999999984 566532 2 888886 79999999999999999987 67776
Q ss_pred EccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEE
Q 025135 98 MSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFI 177 (257)
Q Consensus 98 ls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi 177 (257)
.+. . .+.++++++++.|++.+ ++|++ +|. .+.....++.+++.+++||+
T Consensus 217 an~--~-------~~~~~a~~~~~~l~~~~------i~~iE--eP~--------------~~~d~~~~~~l~~~~~iPIa 265 (410)
T 2qq6_A 217 MHG--R-------FDIPSSIRFARAMEPFG------LLWLE--EPT--------------PPENLDALAEVRRSTSTPIC 265 (410)
T ss_dssp CTT--C-------CCHHHHHHHHHHHGGGC------CSEEE--CCS--------------CTTCHHHHHHHHTTCSSCEE
T ss_pred CCC--C-------CCHHHHHHHHHHHhhcC------CCeEE--CCC--------------ChhhHHHHHHHHhhCCCCEE
Confidence 652 1 35788999999999999 88887 441 12234567789999999999
Q ss_pred EeCCC-CHHHHHHHHHcCCCcEEEec
Q 025135 178 CSGGF-TRELGIQALAEDGADLVAYG 202 (257)
Q Consensus 178 ~~G~i-t~~~a~~~l~~g~~D~V~ig 202 (257)
+.+.+ ++++++++++++.+|+|.+=
T Consensus 266 ~dE~~~~~~~~~~~i~~~~~d~v~ik 291 (410)
T 2qq6_A 266 AGENVYTRFDFRELFAKRAVDYVMPD 291 (410)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECCB
T ss_pred eCCCcCCHHHHHHHHHcCCCCEEecC
Confidence 99998 89999999999999999883
No 38
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=99.54 E-value=1.4e-13 Score=126.36 Aligned_cols=144 Identities=15% Similarity=0.173 Sum_probs=115.1
Q ss_pred HHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccC
Q 025135 23 VIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPA 101 (257)
Q Consensus 23 ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~ 101 (257)
.+++|+++|++++++||++|+||.||+|+ ++++ +.++..|+|++||+++|++ +|.++.+.
T Consensus 149 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~-----------------~~~~-~~~~~~e~v~avr~a~g~d~~l~vDan~- 209 (382)
T 1rvk_A 149 TPEDYGRFAETLVKRGYKGIKLHTWMPPV-----------------SWAP-DVKMDLKACAAVREAVGPDIRLMIDAFH- 209 (382)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEECCCTTS-----------------TTCC-CHHHHHHHHHHHHHHHCTTSEEEEECCT-
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCcCcc-----------------cccc-chHHHHHHHHHHHHHhCCCCeEEEECCC-
Confidence 35678999999999999999999999751 2444 6899999999999999987 68777763
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCC
Q 025135 102 IDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGG 181 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~ 181 (257)
. .+.++++++++.|++.| ++|++ +|. .+.....++.+++.+++||++.+.
T Consensus 210 -~-------~~~~~a~~~~~~l~~~~------i~~iE--~P~--------------~~~~~~~~~~l~~~~~iPIa~dE~ 259 (382)
T 1rvk_A 210 -W-------YSRTDALALGRGLEKLG------FDWIE--EPM--------------DEQSLSSYKWLSDNLDIPVVGPES 259 (382)
T ss_dssp -T-------CCHHHHHHHHHHHHTTT------CSEEE--CCS--------------CTTCHHHHHHHHHHCSSCEEECSS
T ss_pred -C-------CCHHHHHHHHHHHHhcC------CCEEe--CCC--------------ChhhHHHHHHHHhhCCCCEEEeCC
Confidence 1 35788999999999999 88886 441 122345677899999999999999
Q ss_pred C-C-HHHHHHHHHcCCCcEEEechHHhhCchHHHHH
Q 025135 182 F-T-RELGIQALAEDGADLVAYGRLFISNPDLVLRF 215 (257)
Q Consensus 182 i-t-~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~ 215 (257)
+ + +++++++|+++.+|+|.+--..+.-..=..|+
T Consensus 260 ~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 295 (382)
T 1rvk_A 260 AAGKHWHRAEWIKAGACDILRTGVNDVGGITPALKT 295 (382)
T ss_dssp CSSHHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHH
T ss_pred ccCcHHHHHHHHHcCCCCEEeeCchhcCCHHHHHHH
Confidence 8 9 99999999999999999977666555333333
No 39
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=99.50 E-value=5e-13 Score=122.83 Aligned_cols=136 Identities=13% Similarity=0.122 Sum_probs=112.2
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAI 102 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~ 102 (257)
+++|+++|++++++|||+|+||.|+ +.++..|+|++||+++| + +|.+..+.
T Consensus 148 ~e~~~~~a~~~~~~Gf~~iKik~g~-------------------------~~~~~~e~v~avr~a~g-d~~l~vD~n~-- 199 (384)
T 2pgw_A 148 AEELARDAAVGHAQGERVFYLKVGR-------------------------GEKLDLEITAAVRGEIG-DARLRLDANE-- 199 (384)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCS-------------------------CHHHHHHHHHHHHTTST-TCEEEEECTT--
T ss_pred HHHHHHHHHHHHHcCCCEEEECcCC-------------------------CHHHHHHHHHHHHHHcC-CcEEEEecCC--
Confidence 4678999999999999999999763 47889999999999999 6 56554432
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC
Q 025135 103 DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF 182 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i 182 (257)
. .+.+++.++++.|++.| ++||+ +|. .+.....++.+++.+++||++.+.+
T Consensus 200 ~-------~~~~~a~~~~~~l~~~~------i~~iE--qP~--------------~~~~~~~~~~l~~~~~iPI~~de~i 250 (384)
T 2pgw_A 200 G-------WSVHDAINMCRKLEKYD------IEFIE--QPT--------------VSWSIPAMAHVREKVGIPIVADQAA 250 (384)
T ss_dssp C-------CCHHHHHHHHHHHGGGC------CSEEE--CCS--------------CTTCHHHHHHHHHHCSSCEEESTTC
T ss_pred C-------CCHHHHHHHHHHHHhcC------CCEEe--CCC--------------ChhhHHHHHHHHhhCCCCEEEeCCc
Confidence 1 35788999999999999 88987 441 1223566788999999999999998
Q ss_pred -CHHHHHHHHHcCCCcEEEechHHhhCchHHHHHH
Q 025135 183 -TRELGIQALAEDGADLVAYGRLFISNPDLVLRFK 216 (257)
Q Consensus 183 -t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~ 216 (257)
++++++++|+++.+|+|++-...+..+.-..++.
T Consensus 251 ~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~ 285 (384)
T 2pgw_A 251 FTLYDVYEICRQRAADMICIGPREIGGIQPMMKAA 285 (384)
T ss_dssp CSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCEEEEcchhhCCHHHHHHHH
Confidence 8999999999999999999999998887666553
No 40
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=99.46 E-value=3.8e-13 Score=123.20 Aligned_cols=153 Identities=17% Similarity=0.072 Sum_probs=107.1
Q ss_pred HHHHHHHHHHHHcCCCEEEecccccc-------hhhhcCCCCc--CCc----CCCCCCch-----hhHhhHHHHHHHHHH
Q 025135 25 DQYRQAALNAIQAGFDGIEIHGAHGY-------LIDQFLKDGI--NDR----TDEYGGSI-----ENRCRFLMQLVREVI 86 (257)
Q Consensus 25 ~~f~~AA~~a~~aGfDgVEIh~a~Gy-------Ll~qFlSp~~--N~R----~D~yGGs~-----enR~r~~~eiv~aiR 86 (257)
+...+.+++|.++||++|.||.+|.+ +.++|..|.+ |.+ .+..|.++ +.+.++..++|++||
T Consensus 146 ~~~~~~~~ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~~~~d~~~~~~~i~~lr 225 (368)
T 2nli_A 146 QQNRDILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGASKQKISPRDIEEIA 225 (368)
T ss_dssp HHHHHHHHHHHHTTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC-----CTTBCSBCCHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCchHHhhhhccCchhhHHHHHHHH
Confidence 34567888999999999999999987 6667766632 221 13445544 346678899999999
Q ss_pred HHhCCCeEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHH
Q 025135 87 VAIGADRVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLR 166 (257)
Q Consensus 87 ~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (257)
+.++. ||.+|... +. +.++.++++| +|+|.+++....+.. ..+.....+.
T Consensus 226 ~~~~~-PvivK~v~-----------~~----e~a~~a~~~G------ad~I~vs~~ggr~~~--------~g~~~~~~l~ 275 (368)
T 2nli_A 226 GHSGL-PVFVKGIQ-----------HP----EDADMAIKRG------ASGIWVSNHGARQLY--------EAPGSFDTLP 275 (368)
T ss_dssp HHSSS-CEEEEEEC-----------SH----HHHHHHHHTT------CSEEEECCGGGTSCS--------SCCCHHHHHH
T ss_pred HHcCC-CEEEEcCC-----------CH----HHHHHHHHcC------CCEEEEcCCCcCCCC--------CCCChHHHHH
Confidence 99853 89999531 23 3467889999 999998653211111 1122346777
Q ss_pred HHHHHh--CCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhC
Q 025135 167 TWRRSY--QGTFICSGGF-TRELGIQALAEDGADLVAYGRLFISN 208 (257)
Q Consensus 167 ~ir~~~--~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~iad 208 (257)
.+++.+ ++|||++||| +.+++.++|..| ||+|++||+++..
T Consensus 276 ~v~~~v~~~ipVia~GGI~~g~D~~kalalG-Ad~V~iGr~~l~~ 319 (368)
T 2nli_A 276 AIAERVNKRVPIVFDSGVRRGEHVAKALASG-ADVVALGRPVLFG 319 (368)
T ss_dssp HHHHHHTTSSCEEECSSCCSHHHHHHHHHTT-CSEEEECHHHHHH
T ss_pred HHHHHhCCCCeEEEECCCCCHHHHHHHHHcC-CCEEEECHHHHHH
Confidence 888888 6999999999 999999999987 9999999999865
No 41
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=99.46 E-value=1.4e-12 Score=119.37 Aligned_cols=138 Identities=12% Similarity=0.056 Sum_probs=112.5
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAI 102 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~ 102 (257)
.++|+++|++++++||++|+||.||+ + .++..|+|++||+++|++ +|.++.+.
T Consensus 147 ~e~~~~~a~~~~~~Gf~~iKik~g~~--------------------~----~~~~~e~v~avr~a~G~d~~l~vDan~-- 200 (371)
T 2ovl_A 147 VADLKTQADRFLAGGFRAIKMKVGRP--------------------D----LKEDVDRVSALREHLGDSFPLMVDANM-- 200 (371)
T ss_dssp HHHHHHHHHHHHHTTCSCEEEECCCS--------------------S----HHHHHHHHHHHHHHHCTTSCEEEECTT--
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCC--------------------C----HHHHHHHHHHHHHHhCCCCeEEEECCC--
Confidence 45678999999999999999999872 2 457889999999999987 68777763
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC
Q 025135 103 DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF 182 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i 182 (257)
. .+.+++.++++.|++.| ++|++ +|. .+.....++.+++.+++||++.+.+
T Consensus 201 ~-------~~~~~a~~~~~~l~~~~------i~~iE--qP~--------------~~~d~~~~~~l~~~~~iPI~~dE~~ 251 (371)
T 2ovl_A 201 K-------WTVDGAIRAARALAPFD------LHWIE--EPT--------------IPDDLVGNARIVRESGHTIAGGENL 251 (371)
T ss_dssp C-------SCHHHHHHHHHHHGGGC------CSEEE--CCS--------------CTTCHHHHHHHHHHHCSCEEECTTC
T ss_pred C-------CCHHHHHHHHHHHHhcC------CCEEE--CCC--------------CcccHHHHHHHHhhCCCCEEeCCCC
Confidence 2 35788999999999999 88886 441 1123466778999999999999998
Q ss_pred -CHHHHHHHHHcCCCcEEEechHHhhCchHHHHHH
Q 025135 183 -TRELGIQALAEDGADLVAYGRLFISNPDLVLRFK 216 (257)
Q Consensus 183 -t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~ 216 (257)
++++++++|+++.+|+|.+-...+.-+.=..++.
T Consensus 252 ~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~ 286 (371)
T 2ovl_A 252 HTLYDFHNAVRAGSLTLPEPDVSNIGGYTTFRKVA 286 (371)
T ss_dssp CSHHHHHHHHHHTCCSEECCCTTTTTSHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCEEeeCccccCCHHHHHHHH
Confidence 8999999999999999999988887775555543
No 42
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=99.46 E-value=8.2e-13 Score=121.83 Aligned_cols=128 Identities=13% Similarity=0.100 Sum_probs=105.1
Q ss_pred HHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccC
Q 025135 23 VIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPA 101 (257)
Q Consensus 23 ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~ 101 (257)
.+++|+++|++++++||++|+||.|++ +.++..|+|++||+++|++ +|.++.+.
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik~g~~------------------------~~~~~~e~v~avR~avg~d~~l~vDan~- 216 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLKVGQP------------------------DGALDIARVTAVRKHLGDAVPLMVDANQ- 216 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCCS------------------------CHHHHHHHHHHHHHHHCTTSCEEEECTT-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCC------------------------CHHHHHHHHHHHHHHcCCCCEEEEECCC-
Confidence 357789999999999999999998751 2688999999999999987 68777653
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCC
Q 025135 102 IDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGG 181 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~ 181 (257)
. .+.+++.++++.|++.| ++|++ +|. .+.....++.+++.+++||++.+.
T Consensus 217 -~-------~~~~~a~~~~~~l~~~~------i~~iE--~P~--------------~~~~~~~~~~l~~~~~iPIa~dE~ 266 (393)
T 2og9_A 217 -Q-------WDRPTAQRMCRIFEPFN------LVWIE--EPL--------------DAYDHEGHAALALQFDTPIATGEM 266 (393)
T ss_dssp -C-------CCHHHHHHHHHHHGGGC------CSCEE--CCS--------------CTTCHHHHHHHHHHCSSCEEECTT
T ss_pred -C-------CCHHHHHHHHHHHHhhC------CCEEE--CCC--------------CcccHHHHHHHHHhCCCCEEeCCC
Confidence 1 35788999999999999 88886 431 122345677899999999999999
Q ss_pred C-CHHHHHHHHHcCCCcEEEechHH
Q 025135 182 F-TRELGIQALAEDGADLVAYGRLF 205 (257)
Q Consensus 182 i-t~~~a~~~l~~g~~D~V~igR~~ 205 (257)
+ ++++++++|+++.+|+|.+--..
T Consensus 267 ~~~~~~~~~~i~~~~~d~v~ik~~~ 291 (393)
T 2og9_A 267 LTSAAEHGDLIRHRAADYLMPDAPR 291 (393)
T ss_dssp CCSHHHHHHHHHTTCCSEECCCHHH
T ss_pred cCCHHHHHHHHHCCCCCEEeeCccc
Confidence 8 89999999999999999985443
No 43
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=99.45 E-value=1.2e-12 Score=119.16 Aligned_cols=137 Identities=15% Similarity=0.145 Sum_probs=110.2
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAI 102 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~ 102 (257)
.++|+++|++++++||++|+||.||+ + .++..|+|++||+++|++ +|.++.+.
T Consensus 145 ~~~~~~~a~~~~~~Gf~~iKik~g~~--------------------~----~~~~~e~v~avr~a~g~~~~l~vDan~-- 198 (359)
T 1mdl_A 145 VKLATERAVTAAELGFRAVKTRIGYP--------------------A----LDQDLAVVRSIRQAVGDDFGIMVDYNQ-- 198 (359)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCS--------------------S----HHHHHHHHHHHHHHHCSSSEEEEECTT--
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCC--------------------C----HHHHHHHHHHHHHHhCCCCEEEEECCC--
Confidence 46688999999999999999998871 2 478899999999999987 67777663
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC
Q 025135 103 DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF 182 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i 182 (257)
. .+.+++.++++.|++.| ++|++ +|. .+.....++.+++.+++||++.+.+
T Consensus 199 ~-------~~~~~a~~~~~~l~~~~------i~~iE--~P~--------------~~~~~~~~~~l~~~~~iPI~~de~~ 249 (359)
T 1mdl_A 199 S-------LDVPAAIKRSQALQQEG------VTWIE--EPT--------------LQHDYEGHQRIQSKLNVPVQMGENW 249 (359)
T ss_dssp C-------SCHHHHHHHHHHHHHHT------CSCEE--CCS--------------CTTCHHHHHHHHHTCSSCEEECTTC
T ss_pred C-------CCHHHHHHHHHHHHHhC------CCeEE--CCC--------------ChhhHHHHHHHHHhCCCCEEeCCCC
Confidence 2 35788999999999999 88886 441 1123466778999999999999998
Q ss_pred -CHHHHHHHHHcCCCcEEEechHHhhCchHHHHH
Q 025135 183 -TRELGIQALAEDGADLVAYGRLFISNPDLVLRF 215 (257)
Q Consensus 183 -t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~ 215 (257)
++++++++|+++.+|+|++-...+.-..=..++
T Consensus 250 ~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i 283 (359)
T 1mdl_A 250 LGPEEMFKALSIGACRLAMPDAMKIGGVTGWIRA 283 (359)
T ss_dssp CSHHHHHHHHHTTCCSEECCBTTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCEEeecchhhCCHHHHHHH
Confidence 999999999999999999988776555444343
No 44
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=99.44 E-value=1.6e-12 Score=123.69 Aligned_cols=153 Identities=10% Similarity=0.047 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHcCCCEEEecccccc-------hhhhcCCCCcCCc------CCCCCCc---h--hhHhhHHHHHHHHHHH
Q 025135 26 QYRQAALNAIQAGFDGIEIHGAHGY-------LIDQFLKDGINDR------TDEYGGS---I--ENRCRFLMQLVREVIV 87 (257)
Q Consensus 26 ~f~~AA~~a~~aGfDgVEIh~a~Gy-------Ll~qFlSp~~N~R------~D~yGGs---~--enR~r~~~eiv~aiR~ 87 (257)
...+++++|+++|||+|.||..|.. +-++|.+|..+.+ .|.++|. + ..+.++..++|++||+
T Consensus 261 ~~~~~~~rae~aG~~al~itvd~p~~g~R~~~~r~g~~~p~~~~~~~~g~~~~~~~g~~~~~~~~~d~~~~~~~i~~lr~ 340 (511)
T 1kbi_A 261 ITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRALSKFIDPSLTWKDIEELKK 340 (511)
T ss_dssp HHHHHHHHHHHHTCSCEEEECSCSSCCCCHHHHHHHHTTCC-------CCCCSSCCCGGGGCBTTBCTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCCccccHHHHhccCCCCcccccccccccccccccHHHHHhhccChHhHHHHHHHHHH
Confidence 3467778999999999999998755 7788888865444 3445553 1 1456778899999999
Q ss_pred HhCCCeEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHH
Q 025135 88 AIGADRVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRT 167 (257)
Q Consensus 88 ~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (257)
.++. ||.+|... +. +.++.++++| +|+|.+++....+.. ...+ ....+..
T Consensus 341 ~~~~-PvivKgv~-----------~~----e~A~~a~~aG------ad~I~vs~hgG~~~d-------~~~~-~~~~l~~ 390 (511)
T 1kbi_A 341 KTKL-PIVIKGVQ-----------RT----EDVIKAAEIG------VSGVVLSNHGGRQLD-------FSRA-PIEVLAE 390 (511)
T ss_dssp HCSS-CEEEEEEC-----------SH----HHHHHHHHTT------CSEEEECCTTTTSST-------TCCC-HHHHHHH
T ss_pred HhCC-cEEEEeCC-----------CH----HHHHHHHHcC------CCEEEEcCCCCccCC-------CCCc-hHHHHHH
Confidence 9853 89999542 22 3477889999 999998642211111 0122 2456677
Q ss_pred HHHHh-------CCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCc
Q 025135 168 WRRSY-------QGTFICSGGF-TRELGIQALAEDGADLVAYGRLFISNP 209 (257)
Q Consensus 168 ir~~~-------~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~iadP 209 (257)
+++.+ ++|||++||| +..++.++|.-| ||+|++||+++...
T Consensus 391 v~~~v~~~~~~~~ipVia~GGI~~g~Dv~kaLalG-AdaV~iGr~~l~~~ 439 (511)
T 1kbi_A 391 TMPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLG-AKGVGLGRPFLYAN 439 (511)
T ss_dssp HHHHHHTTTCBTTBEEEEESSCCSHHHHHHHHHHT-CSEEEECHHHHHHH
T ss_pred HHHHHHhhccCCCcEEEEECCCCCHHHHHHHHHcC-CCEEEECHHHHHHH
Confidence 77776 7899999999 999999999988 99999999999755
No 45
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=99.43 E-value=1.8e-12 Score=118.96 Aligned_cols=133 Identities=11% Similarity=0.104 Sum_probs=109.9
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAI 102 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~ 102 (257)
+++|+++|++++++|||+|+||.|| + .++..|+|++||+++|++ +|.++.+.
T Consensus 146 ~~~~~~~a~~~~~~Gf~~iKik~g~---------------------~----~~~~~e~v~avr~a~g~d~~l~vDan~-- 198 (379)
T 2rdx_A 146 EAETRAELARHRAAGYRQFQIKVGA---------------------D----WQSDIDRIRACLPLLEPGEKAMADANQ-- 198 (379)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEECCS---------------------C----HHHHHHHHHHHGGGSCTTCEEEEECTT--
T ss_pred HHHHHHHHHHHHHcCCCEEEEeccC---------------------C----HHHHHHHHHHHHHhcCCCCEEEEECCC--
Confidence 3678999999999999999999887 1 578899999999999987 68777653
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC
Q 025135 103 DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF 182 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i 182 (257)
. .+.+++.++++.|++.| + |++ +|. . ....++.+++.+++||++.+.+
T Consensus 199 ~-------~~~~~a~~~~~~l~~~~------i-~iE--~P~--------------~--~~~~~~~l~~~~~iPI~~de~i 246 (379)
T 2rdx_A 199 G-------WRVDNAIRLARATRDLD------Y-ILE--QPC--------------R--SYEECQQVRRVADQPMKLDECV 246 (379)
T ss_dssp C-------SCHHHHHHHHHHTTTSC------C-EEE--CCS--------------S--SHHHHHHHHTTCCSCEEECTTC
T ss_pred C-------CCHHHHHHHHHHHHhCC------e-EEe--CCc--------------C--CHHHHHHHHhhCCCCEEEeCCc
Confidence 2 35788999999999999 8 886 431 1 3466778999999999999998
Q ss_pred -CHHHHHHHHHcCCCcEEEechHHhhCchHHHHH
Q 025135 183 -TRELGIQALAEDGADLVAYGRLFISNPDLVLRF 215 (257)
Q Consensus 183 -t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~ 215 (257)
++++++++|+++.+|+|++-...+.-+.=..++
T Consensus 247 ~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 280 (379)
T 2rdx_A 247 TGLHMAQRIVADRGAEICCLKISNLGGLSKARRT 280 (379)
T ss_dssp CSHHHHHHHHHHTCCSEEEEETTTTTSHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHH
Confidence 899999999999999999988887776544444
No 46
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=99.43 E-value=2e-12 Score=119.06 Aligned_cols=136 Identities=10% Similarity=0.047 Sum_probs=110.2
Q ss_pred HHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccC
Q 025135 23 VIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPA 101 (257)
Q Consensus 23 ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~ 101 (257)
.+++|+++|++++++||++|+||.|+ + ..++ .|+|++||+++|++ +|.++.+.
T Consensus 164 ~~e~~~~~a~~~~~~Gf~~vKik~g~-----------------------~-~~~~-~e~v~avr~a~g~d~~l~vDan~- 217 (388)
T 2nql_A 164 TLKARGELAKYWQDRGFNAFKFATPV-----------------------A-DDGP-AAEIANLRQVLGPQAKIAADMHW- 217 (388)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEGGG-----------------------C-TTCH-HHHHHHHHHHHCTTSEEEEECCS-
T ss_pred CHHHHHHHHHHHHHhCCCEEEEeCCC-----------------------C-ChHH-HHHHHHHHHHhCCCCEEEEECCC-
Confidence 35778999999999999999999874 1 2578 99999999999987 68887653
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCC
Q 025135 102 IDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGG 181 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~ 181 (257)
. .+.+++.++++.|++.| ++|++ +|. .+.....++.+++.+++||++.+.
T Consensus 218 -~-------~~~~~a~~~~~~l~~~~------i~~iE--qP~--------------~~~d~~~~~~l~~~~~iPI~~dE~ 267 (388)
T 2nql_A 218 -N-------QTPERALELIAEMQPFD------PWFAE--APV--------------WTEDIAGLEKVSKNTDVPIAVGEE 267 (388)
T ss_dssp -C-------SCHHHHHHHHHHHGGGC------CSCEE--CCS--------------CTTCHHHHHHHHTSCCSCEEECTT
T ss_pred -C-------CCHHHHHHHHHHHhhcC------CCEEE--CCC--------------ChhhHHHHHHHHhhCCCCEEEeCC
Confidence 2 35788999999999999 88886 431 122346678899999999999999
Q ss_pred C-CHHHHHHHHHcCCCcEEEechHHhhCchHHHHH
Q 025135 182 F-TRELGIQALAEDGADLVAYGRLFISNPDLVLRF 215 (257)
Q Consensus 182 i-t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~ 215 (257)
+ ++++++++++++.+|+|.+-... .-+.=..++
T Consensus 268 ~~~~~~~~~~i~~~~~d~v~ik~~~-GGit~~~~i 301 (388)
T 2nql_A 268 WRTHWDMRARIERCRIAIVQPEMGH-KGITNFIRI 301 (388)
T ss_dssp CCSHHHHHHHHTTSCCSEECCCHHH-HCHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCCEEEecCCC-CCHHHHHHH
Confidence 8 89999999999999999997777 666544444
No 47
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=99.43 E-value=2.9e-12 Score=119.00 Aligned_cols=136 Identities=13% Similarity=0.104 Sum_probs=111.9
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAI 102 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~ 102 (257)
.++++++|++++++||+.|+|+.|||.+ | || ++++...++|++||+++|++ +|.++.+..
T Consensus 180 ~e~~~~~a~~~~~~Gf~~iKik~g~gp~-------------d--g~---~~~~~die~v~avReavG~d~~L~vDaN~~- 240 (412)
T 3stp_A 180 IEAMQKEAEEAMKGGYKAFKSRFGYGPK-------------D--GM---PGMRENLKRVEAVREVIGYDNDLMLECYMG- 240 (412)
T ss_dssp HHHHHHHHHHHHTTTCSEEEEECCCCGG-------------G--HH---HHHHHHHHHHHHHHHHHCSSSEEEEECTTC-
T ss_pred HHHHHHHHHHHHHcCCCEEEEecccCcc-------------c--cc---chHHHHHHHHHHHHHHcCCCCeEEEECCCC-
Confidence 5788899999999999999999999732 1 32 67899999999999999987 788877631
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC
Q 025135 103 DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF 182 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i 182 (257)
.+.++++++++.|++.| ++||+ +|. .+.....++.+++.+++||++.+.+
T Consensus 241 --------~~~~~Ai~~~~~Le~~~------i~~iE--eP~--------------~~~d~~~~~~l~~~~~iPIa~dE~~ 290 (412)
T 3stp_A 241 --------WNLDYAKRMLPKLAPYE------PRWLE--EPV--------------IADDVAGYAELNAMNIVPISGGEHE 290 (412)
T ss_dssp --------SCHHHHHHHHHHHGGGC------CSEEE--CCS--------------CTTCHHHHHHHHHTCSSCEEECTTC
T ss_pred --------CCHHHHHHHHHHHHhcC------CCEEE--CCC--------------CcccHHHHHHHHhCCCCCEEeCCCC
Confidence 35789999999999999 89997 541 1223456788999999999999998
Q ss_pred -CHHHHHHHHHcCCCcEEEechHHhhC
Q 025135 183 -TRELGIQALAEDGADLVAYGRLFISN 208 (257)
Q Consensus 183 -t~~~a~~~l~~g~~D~V~igR~~iad 208 (257)
++++++++++.+.+|+|.+--..+.-
T Consensus 291 ~~~~~~~~li~~~a~D~v~ik~~~~GG 317 (412)
T 3stp_A 291 FSVIGCAELINRKAVSVLQYDTNRVGG 317 (412)
T ss_dssp CSHHHHHHHHHTTCCSEECCCHHHHTH
T ss_pred CCHHHHHHHHHcCCCCEEecChhhcCC
Confidence 89999999999999999986665543
No 48
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=99.43 E-value=1.3e-12 Score=120.59 Aligned_cols=132 Identities=14% Similarity=0.156 Sum_probs=109.6
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEcc
Q 025135 22 EVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSP 100 (257)
Q Consensus 22 ~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~ 100 (257)
.++++|+++|++++++||++|+||.|++|+ |+ | + .++.++.+|+|++||+++|++ +|.+..+.
T Consensus 147 ~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~---~~--------~----~-~~~~~~~~e~v~avR~~~g~d~~l~vDan~ 210 (392)
T 3p3b_A 147 AAVALMQEEAMQGYAKGQRHFKIKVGRGGR---HM--------P----L-WEGTKRDIAIVRGISEVAGPAGKIMIDANN 210 (392)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEECCHHHH---TS--------C----H-HHHHHHHHHHHHHHHHHHCTTCCEEEECTT
T ss_pred chHHHHHHHHHHHHHhCCCEEEECcCcCcc---cC--------C----c-cccHHHHHHHHHHHHHHhCCCCeEEEECCC
Confidence 578999999999999999999999999985 54 1 3 458999999999999999987 67776652
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHH-----hCCc
Q 025135 101 AIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRS-----YQGT 175 (257)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~-----~~~p 175 (257)
. .+.++++++++.|++.+ ++|++ +|. . .....++.+++. +++|
T Consensus 211 --~-------~~~~~ai~~~~~l~~~~------i~~iE--~P~--------------~-~d~~~~~~l~~~l~~~g~~iP 258 (392)
T 3p3b_A 211 --A-------YNLNLTKEVLAALSDVN------LYWLE--EAF--------------H-EDEALYEDLKEWLGQRGQNVL 258 (392)
T ss_dssp --C-------CCHHHHHHHHHHTTTSC------EEEEE--CSS--------------S-CCHHHHHHHHHHHHHHTCCCE
T ss_pred --C-------CCHHHHHHHHHHHHhcC------CCEEe--cCC--------------c-ccHHHHHHHHHhhccCCCCcc
Confidence 1 35788999999999999 89887 441 1 224566778888 8899
Q ss_pred EEEeCCC-CHHHHHHHHHcCCCcEEEec
Q 025135 176 FICSGGF-TRELGIQALAEDGADLVAYG 202 (257)
Q Consensus 176 vi~~G~i-t~~~a~~~l~~g~~D~V~ig 202 (257)
|++.+ + ++++++++|+++.+|+|.+=
T Consensus 259 Ia~dE-~~~~~~~~~~i~~~~~d~v~ik 285 (392)
T 3p3b_A 259 IADGE-GLASPHLIEWATRGRVDVLQYD 285 (392)
T ss_dssp EEECC-SSCCTTHHHHHHTTSCCEECCB
T ss_pred EEecC-CCCHHHHHHHHHcCCCCEEEeC
Confidence 99999 9 89999999999999999883
No 49
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=99.41 E-value=3.3e-12 Score=117.75 Aligned_cols=132 Identities=13% Similarity=0.178 Sum_probs=108.0
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAI 102 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~ 102 (257)
+++|+++|++++++||++|+||.|+ | + .++..|+|++||+++|++ +|.++.+.
T Consensus 150 ~~~~~~~a~~~~~~Gf~~vKik~g~----------------~----~----~~~~~e~v~avR~a~G~d~~l~vDan~-- 203 (391)
T 2qgy_A 150 TNDYLRQIEKFYGKKYGGIKIYPML----------------D----S----LSISIQFVEKVREIVGDELPLMLDLAV-- 203 (391)
T ss_dssp HHHHHHHHHHHHHTTCSCEEECCCC----------------S----S----HHHHHHHHHHHHHHHCSSSCEEEECCC--
T ss_pred HHHHHHHHHHHHHcCCCEEEEccCC----------------C----h----HHHHHHHHHHHHHHhCCCCEEEEEcCC--
Confidence 4778999999999999999999874 0 1 478999999999999987 68887763
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC
Q 025135 103 DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF 182 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i 182 (257)
. .+.++++++++.|++.| ++|++ +|. .+.....++.+++.+++||++.+.+
T Consensus 204 ~-------~~~~~a~~~~~~l~~~~------i~~iE--qP~--------------~~~d~~~~~~l~~~~~iPIa~dE~~ 254 (391)
T 2qgy_A 204 P-------EDLDQTKSFLKEVSSFN------PYWIE--EPV--------------DGENISLLTEIKNTFNMKVVTGEKQ 254 (391)
T ss_dssp C-------SCHHHHHHHHHHHGGGC------CSEEE--CSS--------------CTTCHHHHHHHHHHCSSCEEECTTC
T ss_pred C-------CCHHHHHHHHHHHHhcC------CCeEe--CCC--------------ChhhHHHHHHHHhhCCCCEEEcCCc
Confidence 1 35788999999999999 88886 441 1223466778999999999999998
Q ss_pred -CHHHHHHHHHcCCCcEEEechHHhhCch
Q 025135 183 -TRELGIQALAEDGADLVAYGRLFISNPD 210 (257)
Q Consensus 183 -t~~~a~~~l~~g~~D~V~igR~~iadP~ 210 (257)
++++++++++++.+|+|.+-...+.-..
T Consensus 255 ~~~~~~~~~i~~~~~d~v~ik~~~~GGit 283 (391)
T 2qgy_A 255 SGLVHFRELISRNAADIFNPDISGMGGLI 283 (391)
T ss_dssp CSHHHHHHHHHTTCCSEECCBTTTSSCHH
T ss_pred CCHHHHHHHHHcCCCCEEEECcchhCCHH
Confidence 8999999999999999999766655553
No 50
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=99.39 E-value=9.2e-12 Score=115.06 Aligned_cols=140 Identities=10% Similarity=0.022 Sum_probs=111.4
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAI 102 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~ 102 (257)
+++|+++|++++++||++|+||+ ||. |++++ ++..|+|++||+++|++ +|.++.+.
T Consensus 146 ~~~~~~~a~~~~~~Gf~~iKik~----------spv--------G~~~~---~~~~e~v~avr~a~G~d~~l~vDan~-- 202 (401)
T 2hzg_A 146 PQETLERARAARRDGFAAVKFGW----------GPI--------GRGTV---AADADQIMAAREGLGPDGDLMVDVGQ-- 202 (401)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEES----------TTT--------TSSCH---HHHHHHHHHHHHHHCSSSEEEEECTT--
T ss_pred HHHHHHHHHHHHHhCCCeEEEcC----------CCC--------CCCHH---HHHHHHHHHHHHHhCCCCeEEEECCC--
Confidence 46688999999999999999986 242 55543 67899999999999987 67777663
Q ss_pred CCCCCCCCC--cHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHH-HhCCcEEEe
Q 025135 103 DHLDATDSD--PLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRR-SYQGTFICS 179 (257)
Q Consensus 103 ~~~~~~~~~--~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~-~~~~pvi~~ 179 (257)
. . +.+++.++++.|++.| ++|++ +|. .+.....++.+++ .+++||++.
T Consensus 203 ~-------~~~~~~~a~~~~~~l~~~~------i~~iE--qP~--------------~~~d~~~~~~l~~~~~~iPI~~d 253 (401)
T 2hzg_A 203 I-------FGEDVEAAAARLPTLDAAG------VLWLE--EPF--------------DAGALAAHAALAGRGARVRIAGG 253 (401)
T ss_dssp T-------TTTCHHHHHTTHHHHHHTT------CSEEE--CCS--------------CTTCHHHHHHHHTTCCSSEEEEC
T ss_pred C-------CCCCHHHHHHHHHHHHhcC------CCEEE--CCC--------------CccCHHHHHHHHhhCCCCCEEec
Confidence 1 3 5788999999999999 88886 441 1123456678998 889999999
Q ss_pred CCC-CHHHHHHHHHcCCCcEEEechHHhhCchHHHHH
Q 025135 180 GGF-TRELGIQALAEDGADLVAYGRLFISNPDLVLRF 215 (257)
Q Consensus 180 G~i-t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~ 215 (257)
+.+ ++++++++++++.+|+|.+-...+.-+.=..++
T Consensus 254 E~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 290 (401)
T 2hzg_A 254 EAAHNFHMAQHLMDYGRIGFIQIDCGRIGGLGPAKRV 290 (401)
T ss_dssp TTCSSHHHHHHHHHHSCCSEEEECHHHHTSHHHHHHH
T ss_pred CCcCCHHHHHHHHHCCCCCEEEeCcchhCCHHHHHHH
Confidence 998 899999999999999999988777666544443
No 51
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=99.38 E-value=5.4e-12 Score=116.57 Aligned_cols=127 Identities=12% Similarity=0.151 Sum_probs=103.7
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAI 102 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~ 102 (257)
+++|+++|++++++||++|+||.|+ ++.++..|+|++||+++|++ +|.++.+.
T Consensus 176 ~e~~~~~a~~~~~~Gf~~vKik~g~------------------------~~~~~d~e~v~avR~avG~d~~l~vDan~-- 229 (398)
T 2pp0_A 176 LDQVLKNVVISRENGIGGIKLKVGQ------------------------PNCAEDIRRLTAVREALGDEFPLMVDANQ-- 229 (398)
T ss_dssp HHHHHHHHHHHHHTTCSCEEEECCC------------------------SCHHHHHHHHHHHHHHHCSSSCEEEECTT--
T ss_pred HHHHHHHHHHHHHhCCCeEEEecCC------------------------CCHHHHHHHHHHHHHHcCCCCeEEEECCC--
Confidence 5678899999999999999999774 23678999999999999987 67777653
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC
Q 025135 103 DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF 182 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i 182 (257)
. .+.++++++++.|++.| ++|++ +|. .+......+.+++.+++||++.+.+
T Consensus 230 ~-------~~~~~ai~~~~~l~~~~------i~~iE--qP~--------------~~~d~~~~~~l~~~~~iPIa~dE~~ 280 (398)
T 2pp0_A 230 Q-------WDRETAIRMGRKMEQFN------LIWIE--EPL--------------DAYDIEGHAQLAAALDTPIATGEML 280 (398)
T ss_dssp C-------SCHHHHHHHHHHHGGGT------CSCEE--CCS--------------CTTCHHHHHHHHHHCSSCEEECTTC
T ss_pred C-------CCHHHHHHHHHHHHHcC------Cceee--CCC--------------ChhhHHHHHHHHhhCCCCEEecCCc
Confidence 2 35788999999999999 88886 441 1223456678999999999999998
Q ss_pred -CHHHHHHHHHcCCCcEEEechHH
Q 025135 183 -TRELGIQALAEDGADLVAYGRLF 205 (257)
Q Consensus 183 -t~~~a~~~l~~g~~D~V~igR~~ 205 (257)
++++++++|+++.+|+|.+--.-
T Consensus 281 ~~~~~~~~~i~~~~~d~v~ik~~~ 304 (398)
T 2pp0_A 281 TSFREHEQLILGNASDFVQPDAPR 304 (398)
T ss_dssp CSHHHHHHHHHTTCCSEECCCHHH
T ss_pred CCHHHHHHHHHcCCCCEEEeCccc
Confidence 89999999999999999885433
No 52
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.36 E-value=1.5e-11 Score=117.07 Aligned_cols=139 Identities=18% Similarity=0.123 Sum_probs=100.6
Q ss_pred HHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEE-EccCCCCC
Q 025135 27 YRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVR-MSPAIDHL 105 (257)
Q Consensus 27 f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vr-ls~~~~~~ 105 (257)
+.+.|+++.++|+|+|+||++||+. ++..++++++|+.+++.+|.++ +.
T Consensus 256 ~~~~a~~~~~aG~d~v~i~~~~G~~------------------------~~~~~~i~~i~~~~~~~pvi~~~v~------ 305 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVLDSSQGNS------------------------VYQIAMVHYIKQKYPHLQVIGGNVV------ 305 (514)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCCS------------------------HHHHHHHHHHHHHCTTCEEEEEEEC------
T ss_pred hHHHHHHHHHcCCCEEEeeccCCcc------------------------hhHHHHHHHHHHhCCCCceEecccc------
Confidence 4566777889999999999998652 5788999999999954477653 32
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeC-CCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-C
Q 025135 106 DATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQ-PRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-T 183 (257)
Q Consensus 106 ~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t 183 (257)
+. +.++.+.++| +|+|.+.. +..........+...+.......+..+++.+++|||+.||+ +
T Consensus 306 ------t~----~~a~~l~~aG------ad~I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia~GGI~~ 369 (514)
T 1jcn_A 306 ------TA----AQAKNLIDAG------VDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPIIADGGIQT 369 (514)
T ss_dssp ------SH----HHHHHHHHHT------CSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEEESCCCS
T ss_pred ------hH----HHHHHHHHcC------CCEEEECCCCCcccccccccCCCccchhHHHHHHHHHhhCCCCEEEECCCCC
Confidence 23 3478889999 89998842 11100000000000012334566677888889999999999 8
Q ss_pred HHHHHHHHHcCCCcEEEechHHhhCchHH
Q 025135 184 RELGIQALAEDGADLVAYGRLFISNPDLV 212 (257)
Q Consensus 184 ~~~a~~~l~~g~~D~V~igR~~iadP~l~ 212 (257)
+.++.++|..| ||+|++||+|+.+|+++
T Consensus 370 ~~di~kala~G-Ad~V~iG~~~l~~~e~~ 397 (514)
T 1jcn_A 370 VGHVVKALALG-ASTVMMGSLLAATTEAP 397 (514)
T ss_dssp HHHHHHHHHTT-CSEEEESTTTTTSTTSS
T ss_pred HHHHHHHHHcC-CCeeeECHHHHcCCcCC
Confidence 99999999998 99999999999998765
No 53
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=99.35 E-value=9.1e-12 Score=114.41 Aligned_cols=123 Identities=9% Similarity=0.094 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCC
Q 025135 25 DQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAID 103 (257)
Q Consensus 25 ~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~ 103 (257)
++|+++|++++++||++|+||.|| ++ .++..|+|++||+++|++ +|.+..+. .
T Consensus 141 e~~~~~a~~~~~~Gf~~vKik~g~--------------------~~----~~~d~e~v~avR~a~G~d~~l~vDan~--~ 194 (382)
T 2gdq_A 141 SRSVSNVEAQLKKGFEQIKVKIGG--------------------TS----FKEDVRHINALQHTAGSSITMILDANQ--S 194 (382)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECSS--------------------SC----HHHHHHHHHHHHHHHCTTSEEEEECTT--C
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCC--------------------CC----HHHHHHHHHHHHHhhCCCCEEEEECCC--C
Confidence 788899999999999999999886 12 478899999999999987 67776653 1
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhc-CCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC
Q 025135 104 HLDATDSDPLGLGLAVIQGLNKL-QIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF 182 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~L~~~-G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i 182 (257)
.+.+++.++++.|++. | ++|++ +|. .+......+.+++.+++||++.+.+
T Consensus 195 -------~~~~~a~~~~~~l~~~~~------i~~iE--qP~--------------~~~d~~~~~~l~~~~~iPIa~dE~~ 245 (382)
T 2gdq_A 195 -------YDAAAAFKWERYFSEWTN------IGWLE--EPL--------------PFDQPQDYAMLRSRLSVPVAGGENM 245 (382)
T ss_dssp -------CCHHHHHTTHHHHTTCSC------EEEEE--CCS--------------CSSCHHHHHHHHTTCSSCEEECTTC
T ss_pred -------CCHHHHHHHHHHHhhccC------CeEEE--CCC--------------CcccHHHHHHHHhhCCCCEEecCCc
Confidence 3578899999999999 9 89887 441 1123456678999999999999998
Q ss_pred -CHHHHHHHHHcCCCcEEEec
Q 025135 183 -TRELGIQALAEDGADLVAYG 202 (257)
Q Consensus 183 -t~~~a~~~l~~g~~D~V~ig 202 (257)
++++++++++++.+|+|.+=
T Consensus 246 ~~~~~~~~~i~~~~~d~v~ik 266 (382)
T 2gdq_A 246 KGPAQYVPLLSQRCLDIIQPD 266 (382)
T ss_dssp CSHHHHHHHHHTTCCSEECCC
T ss_pred CCHHHHHHHHHcCCCCEEecC
Confidence 89999999999999999884
No 54
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=99.33 E-value=1.4e-11 Score=113.62 Aligned_cols=127 Identities=16% Similarity=0.169 Sum_probs=102.8
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAI 102 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~ 102 (257)
+++|+++|++++++||++|+||.|+ + .++..|+|++||+++|++ +|.+..+.
T Consensus 146 ~e~~~~~a~~~~~~Gf~~vKik~g~---------------------~----~~~~~e~v~avR~a~g~d~~l~vDan~-- 198 (397)
T 2qde_A 146 PEAVAEEALAVLREGFHFVKLKAGG---------------------P----LKADIAMVAEVRRAVGDDVDLFIDING-- 198 (397)
T ss_dssp HHHHHHHHHHHHHHTCSCEEEECCS---------------------C----HHHHHHHHHHHHHHHCTTSCEEEECTT--
T ss_pred HHHHHHHHHHHHHhhhhheeecccC---------------------C----HHHHHHHHHHHHHhhCCCCEEEEECCC--
Confidence 4778899999999999999999873 2 367889999999999987 67666552
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC
Q 025135 103 DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF 182 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i 182 (257)
. .+.+++.++++.|++.| ++|++ +|. .+.....++.+++.+++||++.+.+
T Consensus 199 ~-------~~~~~a~~~~~~l~~~~------i~~iE--qP~--------------~~~~~~~~~~l~~~~~iPIa~dE~~ 249 (397)
T 2qde_A 199 A-------WTYDQALTTIRALEKYN------LSKIE--QPL--------------PAWDLDGMARLRGKVATPIYADESA 249 (397)
T ss_dssp C-------CCHHHHHHHHHHHGGGC------CSCEE--CCS--------------CTTCHHHHHHHHTTCSSCEEESTTC
T ss_pred C-------CCHHHHHHHHHHHHhCC------CCEEE--CCC--------------ChhhHHHHHHHHhhCCCCEEEeCCc
Confidence 2 35788999999999999 88886 441 1223456678999999999999998
Q ss_pred -CHHHHHHHHHcCCCcEEEechHHh
Q 025135 183 -TRELGIQALAEDGADLVAYGRLFI 206 (257)
Q Consensus 183 -t~~~a~~~l~~g~~D~V~igR~~i 206 (257)
++++++++++++.+|+|.+=-..+
T Consensus 250 ~~~~~~~~~i~~~~~d~v~ik~~~~ 274 (397)
T 2qde_A 250 QELHDLLAIINKGAADGLMIKTQKA 274 (397)
T ss_dssp CSHHHHHHHHHHTCCSEEEECHHHH
T ss_pred CCHHHHHHHHHcCCCCEEEEecccc
Confidence 899999999999999999854443
No 55
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=99.33 E-value=2.7e-11 Score=110.23 Aligned_cols=154 Identities=14% Similarity=0.108 Sum_probs=95.9
Q ss_pred HcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCCCCCcHHH
Q 025135 36 QAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDATDSDPLGL 115 (257)
Q Consensus 36 ~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~~~~~~ 115 (257)
..++|.||||.+| |++. -+.++......+.++++++++++.. ++.+|+++. .+...
T Consensus 153 ~~~ad~ielNiSc---------Pn~~-----g~~~l~~~~~~~~~i~~~v~~~~~~-pv~vK~~p~---------~~~~~ 208 (354)
T 3tjx_A 153 TEKGVILELNLSC---------PNVP-----GKPQVAYDFDAMRQCLTAVSEVYPH-SFGVKMPPY---------FDFAA 208 (354)
T ss_dssp HHHCCEEEEECC-----------------------CTTSHHHHHHHHHHHHHHCCS-CEEEEECCC---------CSHHH
T ss_pred hcCCCEEEeeeCC---------CCCc-----chhhhccCHHHHHHHHHHHHHHhhc-ccccccCCC---------CCchh
Confidence 3589999999999 7653 1335556677899999999999864 899999974 12233
Q ss_pred HHHHHHHHHhcCCccCCceeEEEeeCCC---------cccCC---CcCCCCCCCchhHH---HHHHHHHHHh-CCcEEEe
Q 025135 116 GLAVIQGLNKLQIDQGAKLTYLHVTQPR---------YTAYG---QTESGRPGTEDEEA---QLLRTWRRSY-QGTFICS 179 (257)
Q Consensus 116 ~~~l~~~L~~~G~~~~~~vd~i~v~~~~---------~~~~~---~~~~~~~~~~~~~~---~~~~~ir~~~-~~pvi~~ 179 (257)
....+..+.+.+. .+.+...... ..... ....++.++.+.+. ..++.+++.+ ++|||++
T Consensus 209 ~~~~~~~~~~~~~-----~~~i~~i~t~~~~~~id~~~~~~~~~~~~~~GGlSG~~~~~~a~~~v~~~~~~~~~~pIIg~ 283 (354)
T 3tjx_A 209 FDAAAEILNEFPK-----VQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKLIFGC 283 (354)
T ss_dssp HHHHHHHHHTCTT-----EEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHHHHHHHHhhcc-----cchhheecccccccccccccccccccCcccccccCchhhHHHHHHHHHHHHHhcCCCcEEEe
Confidence 3345555655541 3433322110 00000 00001122233322 3344555554 5799999
Q ss_pred CCC-CHHHHHHHHHcCCCcEEEechHHh-hCchHHHHHHcCC
Q 025135 180 GGF-TRELGIQALAEDGADLVAYGRLFI-SNPDLVLRFKLNA 219 (257)
Q Consensus 180 G~i-t~~~a~~~l~~g~~D~V~igR~~i-adP~l~~k~~~g~ 219 (257)
||| |.+||.+.|..| ||+|+++++++ ..|+++.+|+++.
T Consensus 284 GGI~s~~Da~e~i~aG-As~Vqv~Ta~~y~GP~~~~~I~~~L 324 (354)
T 3tjx_A 284 GGVYTGEDAFLHVLAG-ASMVQVGTALQEEGPSIFERLTSEL 324 (354)
T ss_dssp SSCCSHHHHHHHHHHT-EEEEEECHHHHHHCTTHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHcC-CCEEEEChhhhhcCchHHHHHHHHH
Confidence 999 999999999998 99999999987 6899999998764
No 56
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=99.33 E-value=4.2e-11 Score=109.36 Aligned_cols=137 Identities=12% Similarity=0.112 Sum_probs=108.4
Q ss_pred HHHHHHHHHHHHH-cCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccC
Q 025135 24 IDQYRQAALNAIQ-AGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPA 101 (257)
Q Consensus 24 i~~f~~AA~~a~~-aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~ 101 (257)
.++++++|+++++ +||+.|+||.||+ + .++..|+|++||+++|++ +|.+..+.
T Consensus 143 ~e~~~~~a~~~~~~~Gf~~iKik~g~~--------------------~----~~~~~e~v~avr~a~g~~~~l~vDan~- 197 (370)
T 1nu5_A 143 TARDIDSALEMIETRRHNRFKVKLGAR--------------------T----PAQDLEHIRSIVKAVGDRASVRVDVNQ- 197 (370)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEECSSS--------------------C----HHHHHHHHHHHHHHHGGGCEEEEECTT-
T ss_pred HHHHHHHHHHHHHhCCccEEEEecCCC--------------------C----hHHHHHHHHHHHHhcCCCCEEEEECCC-
Confidence 3678889999999 9999999999873 2 346789999999999976 56665542
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCC
Q 025135 102 IDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGG 181 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~ 181 (257)
. .+.+++.++++.|++.| ++|++ +|. .+.....++.+++.+++||++.+.
T Consensus 198 -~-------~~~~~a~~~~~~l~~~~------i~~iE--qP~--------------~~~~~~~~~~l~~~~~ipIa~dE~ 247 (370)
T 1nu5_A 198 -G-------WDEQTASIWIPRLEEAG------VELVE--QPV--------------PRANFGALRRLTEQNGVAILADES 247 (370)
T ss_dssp -C-------CCHHHHHHHHHHHHHHT------CCEEE--CCS--------------CTTCHHHHHHHHHHCSSEEEESTT
T ss_pred -C-------CCHHHHHHHHHHHHhcC------cceEe--CCC--------------CcccHHHHHHHHHhCCCCEEeCCC
Confidence 2 35788999999999999 88886 541 122345677899999999999999
Q ss_pred C-CHHHHHHHHHcCCCcEEEechHHhhCchHHHHH
Q 025135 182 F-TRELGIQALAEDGADLVAYGRLFISNPDLVLRF 215 (257)
Q Consensus 182 i-t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~ 215 (257)
+ ++++++++++.+.+|+|.+--..+.-..=..++
T Consensus 248 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 282 (370)
T 1nu5_A 248 LSSLSSAFELARDHAVDAFSLKLCNMGGIANTLKV 282 (370)
T ss_dssp CCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHH
T ss_pred CCCHHHHHHHHHhCCCCEEEEchhhcCCHHHHHHH
Confidence 8 899999999999999999977766655444443
No 57
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=99.32 E-value=2.2e-11 Score=111.23 Aligned_cols=136 Identities=13% Similarity=0.197 Sum_probs=108.1
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAI 102 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~ 102 (257)
.++|+++|+++.++||+.|+||.|+ + .++..|+|++||+++|++ +|.+..+.
T Consensus 142 ~~~~~~~a~~~~~~Gf~~iKik~g~---------------------~----~~~~~e~v~avr~a~g~~~~l~vDan~-- 194 (369)
T 2p8b_A 142 PENMAEEAASMIQKGYQSFKMKVGT---------------------N----VKEDVKRIEAVRERVGNDIAIRVDVNQ-- 194 (369)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCS---------------------C----HHHHHHHHHHHHHHHCTTSEEEEECTT--
T ss_pred hHHHHHHHHHHHHcCcCEEEEEeCC---------------------C----HHHHHHHHHHHHHHhCCCCeEEEECCC--
Confidence 3567899999999999999999875 1 578899999999999987 67666542
Q ss_pred CCCCCCCCCcHHHHH-HHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCC
Q 025135 103 DHLDATDSDPLGLGL-AVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGG 181 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~-~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~ 181 (257)
. .+.+++. ++++.|++.| ++|++ +|. .+......+.+++.+++||++.+.
T Consensus 195 ~-------~~~~~a~~~~~~~l~~~~------i~~iE--qP~--------------~~~d~~~~~~l~~~~~iPI~~dE~ 245 (369)
T 2p8b_A 195 G-------WKNSANTLTALRSLGHLN------IDWIE--QPV--------------IADDIDAMAHIRSKTDLPLMIDEG 245 (369)
T ss_dssp T-------TBSHHHHHHHHHTSTTSC------CSCEE--CCB--------------CTTCHHHHHHHHHTCCSCEEESTT
T ss_pred C-------CCHHHHHHHHHHHHHhCC------CcEEE--CCC--------------CcccHHHHHHHHHhCCCCEEeCCC
Confidence 2 2457788 9999999999 88886 441 112345677899999999999999
Q ss_pred C-CHHHHHHHHHcCCCcEEEechHHhhCchHHHHH
Q 025135 182 F-TRELGIQALAEDGADLVAYGRLFISNPDLVLRF 215 (257)
Q Consensus 182 i-t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~ 215 (257)
+ ++++++++++++.+|+|.+-...+.-..=..++
T Consensus 246 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 280 (369)
T 2p8b_A 246 LKSSREMRQIIKLEAADKVNIKLMKCGGIYPAVKL 280 (369)
T ss_dssp CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred CCCHHHHHHHHHhCCCCEEEeecchhCCHHHHHHH
Confidence 8 899999999999999999988777666444444
No 58
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=99.32 E-value=1.3e-11 Score=105.57 Aligned_cols=133 Identities=13% Similarity=0.186 Sum_probs=96.8
Q ss_pred HHHHHHHHcCCCEEE--ecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEE---ccCCC
Q 025135 29 QAALNAIQAGFDGIE--IHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRM---SPAID 103 (257)
Q Consensus 29 ~AA~~a~~aGfDgVE--Ih~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrl---s~~~~ 103 (257)
..+++|.++|+|+|+ ||.+| .|.+.| ..+.+.+++||++++ ++.+|+ ++.
T Consensus 74 ~~~~~A~~~Gad~Id~viN~g~-------------~~~~~~--------~~~~~~i~~v~~a~~--pv~vKvi~e~~~-- 128 (225)
T 1mzh_A 74 KEAVEAVRDGAQELDIVWNLSA-------------FKSEKY--------DFVVEELKEIFRETP--SAVHKVIVETPY-- 128 (225)
T ss_dssp HHHHHHHHTTCSEEEEECCHHH-------------HHTTCH--------HHHHHHHHHHHHTCT--TSEEEEECCGGG--
T ss_pred HHHHHHHHcCCCEEEEEecHHH-------------HhcCCh--------HHHHHHHHHHHHHhc--CceEEEEEeCCC--
Confidence 335788899999999 56665 233333 256677999999987 677898 432
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh--CCcEEEeCC
Q 025135 104 HLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY--QGTFICSGG 181 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~G~ 181 (257)
.+.++...+++.++++| +|+|.++.+ +. .+ ...+..++.+++.+ ++||+++||
T Consensus 129 -------l~~~~~~~~a~~a~eaG------ad~I~tstg-~~------~g-----ga~~~~i~~v~~~v~~~ipVia~GG 183 (225)
T 1mzh_A 129 -------LNEEEIKKAVEICIEAG------ADFIKTSTG-FA------PR-----GTTLEEVRLIKSSAKGRIKVKASGG 183 (225)
T ss_dssp -------CCHHHHHHHHHHHHHHT------CSEEECCCS-CS------SS-----CCCHHHHHHHHHHHTTSSEEEEESS
T ss_pred -------CCHHHHHHHHHHHHHhC------CCEEEECCC-CC------CC-----CCCHHHHHHHHHHhCCCCcEEEECC
Confidence 24567888999999999 999965432 11 01 11245667788887 689999999
Q ss_pred C-CHHHHHHHHHcCCCcEEEechHHhhCchHHHHHH
Q 025135 182 F-TRELGIQALAEDGADLVAYGRLFISNPDLVLRFK 216 (257)
Q Consensus 182 i-t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~ 216 (257)
+ |++++.++|+.| +|.|+++++. ++++.+.
T Consensus 184 I~t~~da~~~l~aG-A~~iG~s~~~----~i~~~~~ 214 (225)
T 1mzh_A 184 IRDLETAISMIEAG-ADRIGTSSGI----SIAEEFL 214 (225)
T ss_dssp CCSHHHHHHHHHTT-CSEEEESCHH----HHHHHHH
T ss_pred CCCHHHHHHHHHhC-chHHHHccHH----HHHHHHH
Confidence 9 899999999987 9999999873 4554443
No 59
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=99.31 E-value=1.7e-11 Score=114.31 Aligned_cols=123 Identities=15% Similarity=0.139 Sum_probs=101.2
Q ss_pred HHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCC
Q 025135 25 DQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAID 103 (257)
Q Consensus 25 ~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~ 103 (257)
++|+++|++++++||++|+||.|| + .++..|+|++||+++|++ +|.+..+. .
T Consensus 187 e~~~~~a~~~~~~Gf~~vKik~g~---------------------~----~~~d~e~v~avR~avG~d~~l~vDan~--~ 239 (428)
T 3bjs_A 187 ESLAEEAQEYIARGYKALKLRIGD---------------------A----ARVDIERVRHVRKVLGDEVDILTDANT--A 239 (428)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCS---------------------C----HHHHHHHHHHHHHHHCTTSEEEEECTT--C
T ss_pred HHHHHHHHHHHHCCCCEEEECCCC---------------------C----HHHHHHHHHHHHHhcCCCCEEEEECCC--C
Confidence 778999999999999999999886 1 478899999999999987 67665542 1
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhC-CcEEEeCCC
Q 025135 104 HLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQ-GTFICSGGF 182 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~G~i 182 (257)
.+.+++.++++.|++.| ++|++ +|. .+......+.+++.++ +||++.+.+
T Consensus 240 -------~~~~eai~~~~~L~~~~------i~~iE--qP~--------------~~~d~~~~~~l~~~~~~iPIa~dE~~ 290 (428)
T 3bjs_A 240 -------YTMADARRVLPVLAEIQ------AGWLE--EPF--------------ACNDFASYREVAKITPLVPIAAGENH 290 (428)
T ss_dssp -------CCHHHHHHHHHHHHHTT------CSCEE--CCS--------------CTTCHHHHHHHTTTCSSSCEEECTTC
T ss_pred -------CCHHHHHHHHHHHHhcC------CCEEE--CCC--------------CccCHHHHHHHHHhCCCCcEEcCCCc
Confidence 35788999999999999 88886 441 1123456678899898 999999998
Q ss_pred -CHHHHHHHHHcCCCcEEEech
Q 025135 183 -TRELGIQALAEDGADLVAYGR 203 (257)
Q Consensus 183 -t~~~a~~~l~~g~~D~V~igR 203 (257)
++++++++++++.+|+|.+=-
T Consensus 291 ~~~~~~~~~i~~~~~d~v~ik~ 312 (428)
T 3bjs_A 291 YTRFEFGQMLDAGAVQVWQPDL 312 (428)
T ss_dssp CSHHHHHHHHTTCCEEEECCBT
T ss_pred CCHHHHHHHHHhCCCCEEEeCc
Confidence 899999999999999998843
No 60
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=99.30 E-value=3e-11 Score=110.76 Aligned_cols=133 Identities=9% Similarity=0.047 Sum_probs=108.7
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAI 102 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~ 102 (257)
.++++++|++++++||+.|+||.||+ + .++..|+|++||+++|++ +|.++.+.
T Consensus 146 ~e~~~~~a~~~~~~Gf~~iKik~g~~--------------------~----~~~~~e~v~avr~a~g~~~~l~vDan~-- 199 (378)
T 2qdd_A 146 PDQMLGLIAEAAAQGYRTHSAKIGGS--------------------D----PAQDIARIEAISAGLPDGHRVTFDVNR-- 199 (378)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECCSS--------------------C----HHHHHHHHHHHHHSCCTTCEEEEECTT--
T ss_pred HHHHHHHHHHHHHHhhhheeecCCCC--------------------C----hHHHHHHHHHHHHHhCCCCEEEEeCCC--
Confidence 36778999999999999999999883 1 578899999999999986 66666552
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC
Q 025135 103 DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF 182 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i 182 (257)
. .+.+++.++++.|+ .+ + |++ +|. . ....++.+++.+++||++.+.+
T Consensus 200 ~-------~~~~~a~~~~~~l~-~~------i-~iE--qP~--------------~--d~~~~~~l~~~~~iPI~~dE~~ 246 (378)
T 2qdd_A 200 A-------WTPAIAVEVLNSVR-AR------D-WIE--QPC--------------Q--TLDQCAHVARRVANPIMLDECL 246 (378)
T ss_dssp C-------CCHHHHHHHHTSCC-CC------C-EEE--CCS--------------S--SHHHHHHHHTTCCSCEEECTTC
T ss_pred C-------CCHHHHHHHHHHhC-CC------c-EEE--cCC--------------C--CHHHHHHHHHhCCCCEEECCCc
Confidence 2 35788999999998 88 8 876 441 1 3456778999999999999998
Q ss_pred -CHHHHHHHHHcCCCcEEEechHHhhCchHHHHH
Q 025135 183 -TRELGIQALAEDGADLVAYGRLFISNPDLVLRF 215 (257)
Q Consensus 183 -t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~ 215 (257)
++++++++++++.+|+|.+-...+.-+.=..++
T Consensus 247 ~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i 280 (378)
T 2qdd_A 247 HEFSDHLAAWSRGACEGVKIKPNRVGGLTRARQI 280 (378)
T ss_dssp CSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred CCHHHHHHHHHhCCCCEEEecccccCCHHHHHHH
Confidence 899999999999999999998888777655554
No 61
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=99.30 E-value=2.8e-11 Score=109.23 Aligned_cols=132 Identities=13% Similarity=0.088 Sum_probs=99.6
Q ss_pred HHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCC
Q 025135 27 YRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLD 106 (257)
Q Consensus 27 f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~ 106 (257)
|.+.++++.++|+|+|++|+++ | .++++++|+. | .+|++++..
T Consensus 77 ~~~~~~~a~~~g~d~V~~~~g~---------p--------------------~~~i~~l~~~-g-~~v~~~v~~------ 119 (332)
T 2z6i_A 77 VEDIVDLVIEEGVKVVTTGAGN---------P--------------------SKYMERFHEA-G-IIVIPVVPS------ 119 (332)
T ss_dssp HHHHHHHHHHTTCSEEEECSSC---------G--------------------GGTHHHHHHT-T-CEEEEEESS------
T ss_pred HHHHHHHHHHCCCCEEEECCCC---------h--------------------HHHHHHHHHc-C-CeEEEEeCC------
Confidence 4577889999999999999886 3 2457777763 3 378888742
Q ss_pred CCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHH
Q 025135 107 ATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRE 185 (257)
Q Consensus 107 ~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~ 185 (257)
.+ .++.+++.| +|+|.++.... + +..+....+..+..+++.+++|||++||| +++
T Consensus 120 ------~~----~a~~~~~~G------aD~i~v~g~~~---G-----G~~g~~~~~~ll~~i~~~~~iPViaaGGI~~~~ 175 (332)
T 2z6i_A 120 ------VA----LAKRMEKIG------ADAVIAEGMEA---G-----GHIGKLTTMTLVRQVATAISIPVIAAGGIADGE 175 (332)
T ss_dssp ------HH----HHHHHHHTT------CSCEEEECTTS---S-----EECCSSCHHHHHHHHHHHCSSCEEEESSCCSHH
T ss_pred ------HH----HHHHHHHcC------CCEEEEECCCC---C-----CCCCCccHHHHHHHHHHhcCCCEEEECCCCCHH
Confidence 32 466788899 89998864311 0 00011233467788999999999999999 799
Q ss_pred HHHHHHHcCCCcEEEechHHhhCchHH------HHHHcCCC
Q 025135 186 LGIQALAEDGADLVAYGRLFISNPDLV------LRFKLNAP 220 (257)
Q Consensus 186 ~a~~~l~~g~~D~V~igR~~iadP~l~------~k~~~g~~ 220 (257)
++.+++..| +|+|++||+++++|++. +++.++..
T Consensus 176 ~~~~al~~G-AdgV~vGs~~l~~~e~~~~~~~k~~~~~~~~ 215 (332)
T 2z6i_A 176 GAAAGFMLG-AEAVQVGTRFVVAKESNAHPNYKEKILKARD 215 (332)
T ss_dssp HHHHHHHTT-CSEEEECHHHHTBTTCCSCHHHHHHHHHCCT
T ss_pred HHHHHHHcC-CCEEEecHHHhcCccccccHHHHHHHHhCCC
Confidence 999999987 99999999999999887 77877653
No 62
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=99.30 E-value=4.3e-11 Score=110.16 Aligned_cols=130 Identities=13% Similarity=0.105 Sum_probs=104.3
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAI 102 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~ 102 (257)
+++|+++|++++++||+.|+||.|| ++ .++..|+|++||+++|++ +|.+..+.
T Consensus 146 ~~~~~~~a~~~~~~Gf~~vKik~g~--------------------~~----~~~~~e~v~avR~a~G~~~~l~vDan~-- 199 (389)
T 2oz8_A 146 DDAFVSLFSHAASIGYSAFKIKVGH--------------------RD----FDRDLRRLELLKTCVPAGSKVMIDPNE-- 199 (389)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCC--------------------SS----HHHHHHHHHHHHTTSCTTCEEEEECTT--
T ss_pred HHHHHHHHHHHHHhCCCEEEEccCC--------------------CC----HHHHHHHHHHHHHhhCCCCeEEEECCC--
Confidence 4668899999999999999999886 22 357889999999999987 67776653
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHh--cCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh-CCcEEEe
Q 025135 103 DHLDATDSDPLGLGLAVIQGLNK--LQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY-QGTFICS 179 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L~~--~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~ 179 (257)
. .+.++++++++.|++ .+ +.|++ +|. .+.....++.+++.+ ++||++.
T Consensus 200 ~-------~~~~~a~~~~~~l~~~g~~------i~~iE--qP~--------------~~~~~~~~~~l~~~~~~iPIa~d 250 (389)
T 2oz8_A 200 A-------WTSKEALTKLVAIREAGHD------LLWVE--DPI--------------LRHDHDGLRTLRHAVTWTQINSG 250 (389)
T ss_dssp C-------BCHHHHHHHHHHHHHTTCC------CSEEE--SCB--------------CTTCHHHHHHHHHHCCSSEEEEC
T ss_pred C-------CCHHHHHHHHHHHHhcCCC------ceEEe--CCC--------------CCcCHHHHHHHHhhCCCCCEEeC
Confidence 2 357889999999999 66 77876 441 112345677899999 9999999
Q ss_pred CCCCHHHHHHHHHcCCCcEEEechHHhhCc
Q 025135 180 GGFTRELGIQALAEDGADLVAYGRLFISNP 209 (257)
Q Consensus 180 G~it~~~a~~~l~~g~~D~V~igR~~iadP 209 (257)
+.+++++++++|+.+.+|+|.+. |-+.+-
T Consensus 251 E~~~~~~~~~~i~~~~~d~v~ik-GGit~a 279 (389)
T 2oz8_A 251 EYLDLQGKRLLLEAHAADILNVH-GQVTDV 279 (389)
T ss_dssp TTCCHHHHHHHHHTTCCSEEEEC-SCHHHH
T ss_pred CCCCHHHHHHHHHcCCCCEEEEC-cCHHHH
Confidence 88899999999999999999998 665554
No 63
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=99.29 E-value=6.9e-11 Score=110.37 Aligned_cols=140 Identities=11% Similarity=0.089 Sum_probs=111.1
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCc-hhhHhhHHHHHHHHHHHHhCCC-eEEEEEccC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGS-IENRCRFLMQLVREVIVAIGAD-RVGVRMSPA 101 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs-~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~ 101 (257)
.+++++.|+.+++.||+.|+|+.++ |..+ .+|.. .++..+...++|++||+++|++ +|.++.+.
T Consensus 147 ~e~~~~~a~~~~~~Gf~~iKlk~g~---------~~~~----~~G~~~~~~~~~~d~e~v~avR~avG~d~~L~vDan~- 212 (433)
T 3rcy_A 147 ADMAAESAADCVARGYTAVKFDPAG---------PYTL----RGGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHG- 212 (433)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCSC---------CCBT----TCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCS-
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCC---------Cccc----ccCCCcchhhHHHHHHHHHHHHHHhCCCCeEEEeCCC-
Confidence 5678888889999999999999987 3221 23432 3456888999999999999987 68877663
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCC
Q 025135 102 IDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGG 181 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~ 181 (257)
. .+.+++.++++.|++.| ++||+ +|. .+.....++.+++.+++||++.+.
T Consensus 213 -~-------~t~~~A~~~~~~Le~~~------i~~iE--eP~--------------~~~~~~~~~~l~~~~~iPIa~dE~ 262 (433)
T 3rcy_A 213 -Q-------FTTAGAIRLGQAIEPYS------PLWYE--EPV--------------PPDNVGAMAQVARAVRIPVATGER 262 (433)
T ss_dssp -C-------BCHHHHHHHHHHHGGGC------CSEEE--CCS--------------CTTCHHHHHHHHHHSSSCEEECTT
T ss_pred -C-------CCHHHHHHHHHHhhhcC------CCEEE--CCC--------------ChhhHHHHHHHHhccCCCEEecCC
Confidence 1 35788999999999999 89997 541 122346678899999999999999
Q ss_pred C-CHHHHHHHHHcCCCcEEEechHHhh
Q 025135 182 F-TRELGIQALAEDGADLVAYGRLFIS 207 (257)
Q Consensus 182 i-t~~~a~~~l~~g~~D~V~igR~~ia 207 (257)
+ ++++++++|+.+.+|+|.+--..+.
T Consensus 263 ~~~~~~~~~~l~~g~~D~v~~d~~~~G 289 (433)
T 3rcy_A 263 LTTKAEFAPVLREGAAAILQPALGRAG 289 (433)
T ss_dssp CCSHHHHHHHHHTTCCSEECCCHHHHT
T ss_pred CCCHHHHHHHHHcCCCCEEEeCchhcC
Confidence 8 8999999999999999998655543
No 64
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=99.29 E-value=9.2e-11 Score=106.94 Aligned_cols=136 Identities=13% Similarity=0.192 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCC
Q 025135 25 DQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAID 103 (257)
Q Consensus 25 ~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~ 103 (257)
+++++.|+++.++||+.|+||.||+ + .+...++|++||+++|++ +|.+..+. .
T Consensus 142 ~~~~~~a~~~~~~Gf~~iKik~g~~--------------------~----~~~d~~~v~avr~a~g~~~~l~vDan~--~ 195 (366)
T 1tkk_A 142 EEMAADAENYLKQGFQTLKIKVGKD--------------------D----IATDIARIQEIRKRVGSAVKLRLDANQ--G 195 (366)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCSS--------------------C----HHHHHHHHHHHHHHHCSSSEEEEECTT--C
T ss_pred HHHHHHHHHHHHcCCCeEEEEeCCC--------------------C----HHHHHHHHHHHHHHhCCCCeEEEECCC--C
Confidence 5678889999999999999998861 1 567889999999999986 67776653 2
Q ss_pred CCCCCCCCcHHHHHHHHHHHHh--cCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCC
Q 025135 104 HLDATDSDPLGLGLAVIQGLNK--LQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGG 181 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~L~~--~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~ 181 (257)
.+.+++.++++.|++ .+ ++||+ +|. .+.....++.+++.+++||++.+.
T Consensus 196 -------~~~~~a~~~~~~l~~~~~~------i~~iE--qP~--------------~~~d~~~~~~l~~~~~ipIa~dE~ 246 (366)
T 1tkk_A 196 -------WRPKEAVTAIRKMEDAGLG------IELVE--QPV--------------HKDDLAGLKKVTDATDTPIMADES 246 (366)
T ss_dssp -------SCHHHHHHHHHHHHHTTCC------EEEEE--CCS--------------CTTCHHHHHHHHHHCSSCEEECTT
T ss_pred -------CCHHHHHHHHHHHhhcCCC------ceEEE--CCC--------------CcccHHHHHHHHhhCCCCEEEcCC
Confidence 357889999999999 88 88887 541 122345667899999999999999
Q ss_pred C-CHHHHHHHHHcCCCcEEEechHHhhCchHHHHH
Q 025135 182 F-TRELGIQALAEDGADLVAYGRLFISNPDLVLRF 215 (257)
Q Consensus 182 i-t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~ 215 (257)
+ +++++.++++.+.+|+|.+--..+.-..=..++
T Consensus 247 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 281 (366)
T 1tkk_A 247 VFTPRQAFEVLQTRSADLINIKLMKAGGISGAEKI 281 (366)
T ss_dssp CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred CCCHHHHHHHHHhCCCCEEEeehhhhcCHHHHHHH
Confidence 8 899999999999999999977766555433333
No 65
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=99.28 E-value=1.1e-10 Score=105.71 Aligned_cols=137 Identities=14% Similarity=0.107 Sum_probs=108.7
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAI 102 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~ 102 (257)
.++|+++|+++.++||+.|+||.|| + .+...++|++||++ |++ +|.+..+ .
T Consensus 140 ~~~~~~~a~~~~~~Gf~~iKik~g~---------------------~----~~~d~~~v~avr~~-g~~~~l~vDan--~ 191 (345)
T 2zad_A 140 VENRVKEAKKIFEEGFRVIKIKVGE---------------------N----LKEDIEAVEEIAKV-TRGAKYIVDAN--M 191 (345)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCS---------------------C----HHHHHHHHHHHHHH-STTCEEEEECT--T
T ss_pred HHHHHHHHHHHHHcCcCEEEEeecC---------------------C----HHHHHHHHHHHHhh-CCCCeEEEECC--C
Confidence 3567889999999999999999876 1 34568899999999 876 4544333 1
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhcCCccCCcee--EEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeC
Q 025135 103 DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLT--YLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSG 180 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd--~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G 180 (257)
. .+.+++.++++.|++.+ ++ |++ +|- .+.....++.+++.+++||++.+
T Consensus 192 ~-------~~~~~a~~~~~~l~~~~------i~~~~iE--~P~--------------~~~~~~~~~~l~~~~~ipia~dE 242 (345)
T 2zad_A 192 G-------YTQKEAVEFARAVYQKG------IDIAVYE--QPV--------------RREDIEGLKFVRFHSPFPVAADE 242 (345)
T ss_dssp C-------SCHHHHHHHHHHHHHTT------CCCSEEE--CCS--------------CTTCHHHHHHHHHHSSSCEEEST
T ss_pred C-------CCHHHHHHHHHHHHhcC------CCeeeee--CCC--------------CcccHHHHHHHHHhCCCCEEEeC
Confidence 2 35788999999999999 88 887 541 12234566789999999999999
Q ss_pred CC-CHHHHHHHHHcCCCcEEEe--chHHhhCchHHHHHHc
Q 025135 181 GF-TRELGIQALAEDGADLVAY--GRLFISNPDLVLRFKL 217 (257)
Q Consensus 181 ~i-t~~~a~~~l~~g~~D~V~i--gR~~iadP~l~~k~~~ 217 (257)
.+ ++++++++++++.+|+|.+ +||-+.+.--+.++.+
T Consensus 243 ~~~~~~~~~~~i~~~~~d~v~ik~~~GGit~~~~i~~~A~ 282 (345)
T 2zad_A 243 SARTKFDVMRLVKEEAVDYVNIKLMKSGISDALAIVEIAE 282 (345)
T ss_dssp TCCSHHHHHHHHHHTCCSEEEECHHHHHHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHhCCCCEEEEecccccHHHHHHHHHHHH
Confidence 98 8999999999999999999 8888888866666654
No 66
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=99.27 E-value=3.9e-11 Score=110.53 Aligned_cols=126 Identities=13% Similarity=0.178 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAI 102 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~ 102 (257)
+++++++|+++.++||+.|+||.||+ + .++..|+|++||+++|++ +|.+..+.
T Consensus 166 ~~~~~~~a~~~~~~Gf~~iKik~g~~--------------------~----~~~~~e~v~avr~a~g~~~~l~vDan~-- 219 (392)
T 1tzz_A 166 LSMLRGEMRGYLDRGYNVVKMKIGGA--------------------P----IEEDRMRIEAVLEEIGKDAQLAVDANG-- 219 (392)
T ss_dssp HHHHHHHHHHHHTTTCSEEEEECSSS--------------------C----HHHHHHHHHHHHHHHTTTCEEEEECTT--
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCC--------------------C----HHHHHHHHHHHHHhcCCCCeEEEECCC--
Confidence 56788999999999999999998871 1 467889999999999987 67776653
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC
Q 025135 103 DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF 182 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i 182 (257)
. .+.++++++++.|++.+ ++|++ +|. .+.....++.+++.+++||++.+.+
T Consensus 220 ~-------~~~~~a~~~~~~l~~~~------i~~iE--qP~--------------~~~d~~~~~~l~~~~~iPIa~dE~~ 270 (392)
T 1tzz_A 220 R-------FNLETGIAYAKMLRDYP------LFWYE--EVG--------------DPLDYALQAALAEFYPGPMATGENL 270 (392)
T ss_dssp C-------CCHHHHHHHHHHHTTSC------CSEEE--CCS--------------CTTCHHHHHHHTTTCCSCEEECTTC
T ss_pred C-------CCHHHHHHHHHHHHHcC------CCeec--CCC--------------ChhhHHHHHHHHhhCCCCEEECCCC
Confidence 1 35788999999999999 88887 541 1223456778999999999999998
Q ss_pred -CHHHHHHHHHcC----CCcEEEechH
Q 025135 183 -TRELGIQALAED----GADLVAYGRL 204 (257)
Q Consensus 183 -t~~~a~~~l~~g----~~D~V~igR~ 204 (257)
++++++++++++ .+|+|.+--.
T Consensus 271 ~~~~~~~~~i~~~~~~~~~d~v~ik~~ 297 (392)
T 1tzz_A 271 FSHQDARNLLRYGGMRPDRDWLQFDCA 297 (392)
T ss_dssp CSHHHHHHHHHHSCCCTTTCEECCCTT
T ss_pred CCHHHHHHHHHcCCCccCCcEEEECcc
Confidence 899999999999 9999998533
No 67
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=99.27 E-value=5.8e-11 Score=108.48 Aligned_cols=132 Identities=14% Similarity=0.049 Sum_probs=107.2
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAI 102 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~ 102 (257)
.++|+++|++++++||++|+||.|+ + .++..|+|++||+++|++ +|.++.+.
T Consensus 147 ~~~~~~~a~~~~~~Gf~~iKik~g~---------------------~----~~~~~e~v~avr~a~g~~~~l~vDan~-- 199 (371)
T 2ps2_A 147 PEDMRARVAKYRAKGYKGQSVKISG---------------------E----PVTDAKRITAALANQQPDEFFIVDANG-- 199 (371)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEECCS---------------------C----HHHHHHHHHHHTTTCCTTCEEEEECTT--
T ss_pred HHHHHHHHHHHHHhChheEEeecCC---------------------C----HHHHHHHHHHHHHhcCCCCEEEEECCC--
Confidence 4668899999999999999999874 1 578899999999999987 67776653
Q ss_pred CCCCCCCCCcHHHHHHHHHHH-HhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCC
Q 025135 103 DHLDATDSDPLGLGLAVIQGL-NKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGG 181 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L-~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~ 181 (257)
. .+.+++.++++.| ++.+ + |++ +|. . ....++.+++.+++||++.+.
T Consensus 200 ~-------~~~~~a~~~~~~l~~~~~------i-~iE--~P~--------------~--~~~~~~~l~~~~~iPI~~dE~ 247 (371)
T 2ps2_A 200 K-------LSVETALRLLRLLPHGLD------F-ALE--APC--------------A--TWRECISLRRKTDIPIIYDEL 247 (371)
T ss_dssp B-------CCHHHHHHHHHHSCTTCC------C-EEE--CCB--------------S--SHHHHHHHHTTCCSCEEESTT
T ss_pred C-------cCHHHHHHHHHHHHhhcC------C-cCc--CCc--------------C--CHHHHHHHHhhCCCCEEeCCC
Confidence 2 3578899999999 9998 8 886 441 1 245667899999999999999
Q ss_pred C-CHHHHHHHHHcCCCcEEEechHHhhCchHHHH
Q 025135 182 F-TRELGIQALAEDGADLVAYGRLFISNPDLVLR 214 (257)
Q Consensus 182 i-t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k 214 (257)
+ ++++++++|+++.+|+|.+-...+.-..=..+
T Consensus 248 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 281 (371)
T 2ps2_A 248 ATNEMSIVKILADDAAEGIDLKISKAGGLTRGRR 281 (371)
T ss_dssp CCSHHHHHHHHHHTCCSEEEEEHHHHTSHHHHHH
T ss_pred cCCHHHHHHHHHhCCCCEEEechhhcCCHHHHHH
Confidence 8 89999999999999999998777666544443
No 68
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=99.27 E-value=9.9e-11 Score=106.19 Aligned_cols=140 Identities=16% Similarity=0.121 Sum_probs=91.0
Q ss_pred HHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhH--HHHHHHHHHHHhCCCeEEEEEccCCCCCCCCCC
Q 025135 33 NAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRF--LMQLVREVIVAIGADRVGVRMSPAIDHLDATDS 110 (257)
Q Consensus 33 ~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~--~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~ 110 (257)
.+.++|+|+|+||.+| ++++++|..+ ..| +.++|++||+.++ .||.+|+..+ .
T Consensus 135 ~~~~~gad~i~i~~~~---~~~~~~~~~~-------------~~~~~~~~~i~~vr~~~~-~Pv~vK~~~~-~------- 189 (349)
T 1p0k_A 135 AVEMIGANALQIHLNV---IQEIVMPEGD-------------RSFSGALKRIEQICSRVS-VPVIVKEVGF-G------- 189 (349)
T ss_dssp HHHHTTCSEEEEEECT---TTTC---------------------CTTHHHHHHHHHHHCS-SCEEEEEESS-C-------
T ss_pred HHHhcCCCeEEecccc---hhhhcCCCCC-------------cchHHHHHHHHHHHHHcC-CCEEEEecCC-C-------
Confidence 3456899999999998 3555554321 122 7899999999885 3899998532 1
Q ss_pred CcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCC--Cc-CCC-----CCCCchhHHHHHHHHHHHh-CCcEEEeCC
Q 025135 111 DPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYG--QT-ESG-----RPGTEDEEAQLLRTWRRSY-QGTFICSGG 181 (257)
Q Consensus 111 ~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~--~~-~~~-----~~~~~~~~~~~~~~ir~~~-~~pvi~~G~ 181 (257)
.+. +.++.+.++| +|+|.++........ .. ... ...........+..+++.+ ++|||++||
T Consensus 190 ~~~----~~a~~a~~~G------ad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GG 259 (349)
T 1p0k_A 190 MSK----ASAGKLYEAG------AAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEFPASTMIASGG 259 (349)
T ss_dssp CCH----HHHHHHHHHT------CSEEEEEC---------------CCGGGGTTCSCCHHHHHHHHHHHCTTSEEEEESS
T ss_pred CCH----HHHHHHHHcC------CCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhcCCCeEEEECC
Confidence 122 4577888999 899988532110000 00 000 0001112345667777776 799999999
Q ss_pred C-CHHHHHHHHHcCCCcEEEechHHhhC
Q 025135 182 F-TRELGIQALAEDGADLVAYGRLFISN 208 (257)
Q Consensus 182 i-t~~~a~~~l~~g~~D~V~igR~~iad 208 (257)
| +++++.++|..| ||+|++||+++..
T Consensus 260 I~~~~d~~k~l~~G-Ad~V~iG~~~l~~ 286 (349)
T 1p0k_A 260 LQDALDVAKAIALG-ASCTGMAGHFLKA 286 (349)
T ss_dssp CCSHHHHHHHHHTT-CSEEEECHHHHHH
T ss_pred CCCHHHHHHHHHcC-CCEEEEcHHHHHH
Confidence 9 899999999987 9999999999975
No 69
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=99.24 E-value=4.4e-11 Score=109.63 Aligned_cols=128 Identities=16% Similarity=0.179 Sum_probs=104.1
Q ss_pred HHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCC
Q 025135 25 DQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAID 103 (257)
Q Consensus 25 ~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~ 103 (257)
+++++.|++++++||+.|+|+.||. |++ .+...++|++||+++|++ +|.++.+. .
T Consensus 148 e~~~~~a~~~~~~Gf~~iKlk~g~~------------------g~~----~~~d~~~v~avR~a~g~~~~l~vDan~--~ 203 (374)
T 3sjn_A 148 EDNVAIVQGLKDQGFSSIKFGGGVM------------------GDD----PDTDYAIVKAVREAAGPEMEVQIDLAS--K 203 (374)
T ss_dssp GGGHHHHHHHHTTTCSEEEEECTTT------------------TSC----HHHHHHHHHHHHHHHCSSSEEEEECTT--T
T ss_pred HHHHHHHHHHHHcCCCEEEeccCCC------------------CCC----HHHHHHHHHHHHHHhCCCCeEEEECCC--C
Confidence 6778889999999999999999871 334 457889999999999987 78887763 2
Q ss_pred CCCCCCCCc-HHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC
Q 025135 104 HLDATDSDP-LGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF 182 (257)
Q Consensus 104 ~~~~~~~~~-~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i 182 (257)
.+ .+++.++++.|++.| ++|++ +|. .+.....++.+++.+++||++.+.+
T Consensus 204 -------~~d~~~A~~~~~~l~~~~------i~~iE--qP~--------------~~~~~~~~~~l~~~~~iPIa~dE~~ 254 (374)
T 3sjn_A 204 -------WHTCGHSAMMAKRLEEFN------LNWIE--EPV--------------LADSLISYEKLSRQVSQKIAGGESL 254 (374)
T ss_dssp -------TCSHHHHHHHHHHSGGGC------CSEEE--CSS--------------CTTCHHHHHHHHHHCSSEEEECTTC
T ss_pred -------CCCHHHHHHHHHHhhhcC------ceEEE--CCC--------------CcccHHHHHHHHhhCCCCEEeCCCc
Confidence 34 788999999999999 89997 541 1223456778999999999999998
Q ss_pred -CHHHHHHHHHcCCCcEEEechHH
Q 025135 183 -TRELGIQALAEDGADLVAYGRLF 205 (257)
Q Consensus 183 -t~~~a~~~l~~g~~D~V~igR~~ 205 (257)
++++++++++.+.+|+|.+--..
T Consensus 255 ~~~~~~~~~l~~~~~d~v~~k~~~ 278 (374)
T 3sjn_A 255 TTRYEFQEFITKSNADIVQPDITR 278 (374)
T ss_dssp CHHHHHHHHHHHHCCSEECCBTTT
T ss_pred CCHHHHHHHHHcCCCCEEEeCccc
Confidence 89999999999999999875433
No 70
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=99.24 E-value=7.6e-11 Score=110.22 Aligned_cols=123 Identities=16% Similarity=0.212 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAI 102 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~ 102 (257)
.++|+++|++++++||+.|+||.|. + .++..|+|++||+++|++ +|.+..+.
T Consensus 199 ~e~~~~~a~~~~~~Gf~~vKik~g~---------------------~----~~~d~e~v~avR~a~G~d~~l~vDan~-- 251 (441)
T 2hxt_A 199 DEKLVRLAKEAVADGFRTIKLKVGA---------------------N----VQDDIRRCRLARAAIGPDIAMAVDANQ-- 251 (441)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCS---------------------C----HHHHHHHHHHHHHHHCSSSEEEEECTT--
T ss_pred HHHHHHHHHHHHHcCCCEEEEccCC---------------------C----HHHHHHHHHHHHHhcCCCCeEEEECCC--
Confidence 4678999999999999999999762 1 578899999999999987 67666552
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh-CCcEEEeCC
Q 025135 103 DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY-QGTFICSGG 181 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~G~ 181 (257)
. .+.++++++++.|++.| ++|++ +|. .+......+.+++.+ ++||++.+.
T Consensus 252 ~-------~~~~~a~~~~~~l~~~~------i~~iE--qP~--------------~~~d~~~~~~l~~~~~~iPIa~dE~ 302 (441)
T 2hxt_A 252 R-------WDVGPAIDWMRQLAEFD------IAWIE--EPT--------------SPDDVLGHAAIRQGITPVPVSTGEH 302 (441)
T ss_dssp C-------CCHHHHHHHHHTTGGGC------CSCEE--CCS--------------CTTCHHHHHHHHHHHTTSCEEECTT
T ss_pred C-------CCHHHHHHHHHHHHhcC------CCeee--CCC--------------CHHHHHHHHHHHhhCCCCCEEEeCC
Confidence 1 35788999999999999 88886 441 122345667889888 599999999
Q ss_pred C-CHHHHHHHHHcCCCcEEEec
Q 025135 182 F-TRELGIQALAEDGADLVAYG 202 (257)
Q Consensus 182 i-t~~~a~~~l~~g~~D~V~ig 202 (257)
+ ++++++++|+.+.+|+|.+-
T Consensus 303 ~~~~~~~~~~i~~~~~d~v~ik 324 (441)
T 2hxt_A 303 TQNRVVFKQLLQAGAVDLIQID 324 (441)
T ss_dssp CCSHHHHHHHHHHTCCSEECCC
T ss_pred cCCHHHHHHHHHcCCCCEEEeC
Confidence 8 89999999999999999874
No 71
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.19 E-value=2.7e-10 Score=107.82 Aligned_cols=144 Identities=18% Similarity=0.115 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCC
Q 025135 25 DQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDH 104 (257)
Q Consensus 25 ~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~ 104 (257)
+.+.+.+..+.++|+|.|+||.+||+. +...++++++|+.++..+|.+.-.
T Consensus 236 ~~~~~~a~~l~~aGvd~v~i~~~~G~~------------------------~~~~e~i~~i~~~~p~~pvi~g~~----- 286 (494)
T 1vrd_A 236 PETMERVEKLVKAGVDVIVIDTAHGHS------------------------RRVIETLEMIKADYPDLPVVAGNV----- 286 (494)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSCCSS------------------------HHHHHHHHHHHHHCTTSCEEEEEE-----
T ss_pred HhHHHHHHHHHHhCCCEEEEEecCCch------------------------HHHHHHHHHHHHHCCCceEEeCCc-----
Confidence 345678888899999999999988631 467799999999996457665321
Q ss_pred CCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccC-CCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-
Q 025135 105 LDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAY-GQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF- 182 (257)
Q Consensus 105 ~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i- 182 (257)
.+.++ ++.|.++| +|+|.++...-... .....+...+.......+...++.+++|||+.||+
T Consensus 287 ------~t~e~----a~~l~~~G------~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipvia~GGI~ 350 (494)
T 1vrd_A 287 ------ATPEG----TEALIKAG------ADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARKYDVPIIADGGIR 350 (494)
T ss_dssp ------CSHHH----HHHHHHTT------CSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCC
T ss_pred ------CCHHH----HHHHHHcC------CCEEEEcCCCCccccccccCCCCccHHHHHHHHHHHHhhcCCCEEEECCcC
Confidence 23443 47788899 89998853211000 00000000011111222233334468999999999
Q ss_pred CHHHHHHHHHcCCCcEEEechHHhhCchHHHH
Q 025135 183 TRELGIQALAEDGADLVAYGRLFISNPDLVLR 214 (257)
Q Consensus 183 t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k 214 (257)
++.++.++|..| ||+|++||+|+.+|+++.+
T Consensus 351 ~~~di~kala~G-Ad~V~iGr~~l~~~e~~~~ 381 (494)
T 1vrd_A 351 YSGDIVKALAAG-AESVMVGSIFAGTEEAPGE 381 (494)
T ss_dssp SHHHHHHHHHTT-CSEEEESHHHHTBTTSSSE
T ss_pred CHHHHHHHHHcC-CCEEEECHHHhcCCcCCcc
Confidence 999999999998 9999999999999988654
No 72
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=99.19 E-value=2.7e-10 Score=104.95 Aligned_cols=136 Identities=15% Similarity=0.123 Sum_probs=107.6
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAI 102 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~ 102 (257)
.+++++.|+.+.+.||+.|+|+.|+ + .+...++|++||+++|++ +|.++.+.
T Consensus 152 ~e~~~~~a~~~~~~G~~~iKiKvG~---------------------~----~~~d~~~v~avR~a~g~d~~l~vDan~-- 204 (389)
T 3ozy_A 152 PDQAADELAGWVEQGFTAAKLKVGR---------------------A----PRKDAANLRAMRQRVGADVEILVDANQ-- 204 (389)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCS---------------------C----HHHHHHHHHHHHHHHCTTSEEEEECTT--
T ss_pred HHHHHHHHHHHHHCCCCEEeeccCC---------------------C----HHHHHHHHHHHHHHcCCCceEEEECCC--
Confidence 3567778888889999999999875 1 345789999999999987 68877763
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHH-HHhCCcEEEeCC
Q 025135 103 DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWR-RSYQGTFICSGG 181 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir-~~~~~pvi~~G~ 181 (257)
. .+.+++.++++.|++.| ++||+ +|. .+.....++.++ +.+++||++.+.
T Consensus 205 ~-------~~~~~A~~~~~~l~~~~------i~~iE--qP~--------------~~~d~~~~~~l~~~~~~iPIa~dE~ 255 (389)
T 3ozy_A 205 S-------LGRHDALAMLRILDEAG------CYWFE--EPL--------------SIDDIEGHRILRAQGTPVRIATGEN 255 (389)
T ss_dssp C-------CCHHHHHHHHHHHHHTT------CSEEE--SCS--------------CTTCHHHHHHHHTTCCSSEEEECTT
T ss_pred C-------cCHHHHHHHHHHHHhcC------CCEEE--CCC--------------CcccHHHHHHHHhcCCCCCEEeCCC
Confidence 2 35788999999999999 89997 541 112345667899 889999999999
Q ss_pred C-CHHHHHHHHHcCCCcEEEechHHhhCchHHHHH
Q 025135 182 F-TRELGIQALAEDGADLVAYGRLFISNPDLVLRF 215 (257)
Q Consensus 182 i-t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~ 215 (257)
+ ++++++++++.+.+|+|.+--..+.-..=..|+
T Consensus 256 i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 290 (389)
T 3ozy_A 256 LYTRNAFNDYIRNDAIDVLQADASRAGGITEALAI 290 (389)
T ss_dssp CCHHHHHHHHHHTTCCSEECCCTTTSSCHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHH
Confidence 8 899999999999999999977766555433443
No 73
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=99.19 E-value=2.5e-10 Score=105.51 Aligned_cols=138 Identities=16% Similarity=0.089 Sum_probs=94.7
Q ss_pred HHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCC
Q 025135 27 YRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLD 106 (257)
Q Consensus 27 f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~ 106 (257)
+.+.++.+.++|+|+|+||++||+ .+++.++|+++|+.+++.+|.+.--
T Consensus 154 ~~~~a~~~~~~G~d~i~i~~~~g~------------------------~~~~~e~i~~ir~~~~~~pviv~~v------- 202 (404)
T 1eep_A 154 TIERVEELVKAHVDILVIDSAHGH------------------------STRIIELIKKIKTKYPNLDLIAGNI------- 202 (404)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCS------------------------SHHHHHHHHHHHHHCTTCEEEEEEE-------
T ss_pred HHHHHHHHHHCCCCEEEEeCCCCC------------------------hHHHHHHHHHHHHHCCCCeEEEcCC-------
Confidence 455667788999999999987731 2678999999999996447766211
Q ss_pred CCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCc-CCCCCCCchhHHHHHHHHHH---HhCCcEEEeCCC
Q 025135 107 ATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQT-ESGRPGTEDEEAQLLRTWRR---SYQGTFICSGGF 182 (257)
Q Consensus 107 ~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ir~---~~~~pvi~~G~i 182 (257)
.+. +.++.++++| +|+|.+....- ..... ..... ..+ ....+..+++ ..++|||+.|||
T Consensus 203 ----~~~----~~a~~a~~~G------ad~I~vg~~~G-~~~~~~~~~~~-g~p-~~~~l~~v~~~~~~~~ipVia~GGI 265 (404)
T 1eep_A 203 ----VTK----EAALDLISVG------ADCLKVGIGPG-SICTTRIVAGV-GVP-QITAICDVYEACNNTNICIIADGGI 265 (404)
T ss_dssp ----CSH----HHHHHHHTTT------CSEEEECSSCS-TTSHHHHHHCC-CCC-HHHHHHHHHHHHTTSSCEEEEESCC
T ss_pred ----CcH----HHHHHHHhcC------CCEEEECCCCC-cCcCccccCCC-Ccc-hHHHHHHHHHHHhhcCceEEEECCC
Confidence 122 4577888999 89998831100 00000 00001 111 1233444444 467999999999
Q ss_pred -CHHHHHHHHHcCCCcEEEechHHhhCchHHH
Q 025135 183 -TRELGIQALAEDGADLVAYGRLFISNPDLVL 213 (257)
Q Consensus 183 -t~~~a~~~l~~g~~D~V~igR~~iadP~l~~ 213 (257)
+++++.++|..| ||+|++||+++..|+.+.
T Consensus 266 ~~~~d~~~ala~G-Ad~V~iG~~~l~~~e~~~ 296 (404)
T 1eep_A 266 RFSGDVVKAIAAG-ADSVMIGNLFAGTKESPS 296 (404)
T ss_dssp CSHHHHHHHHHHT-CSEEEECHHHHTBTTSSS
T ss_pred CCHHHHHHHHHcC-CCHHhhCHHHhcCCCCCc
Confidence 899999999998 999999999999988863
No 74
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=99.14 E-value=2.6e-10 Score=103.96 Aligned_cols=119 Identities=18% Similarity=0.209 Sum_probs=93.9
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAI 102 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~ 102 (257)
+++|+++|+++.++||++|+||.+ | ++..|+|++||+++|++ +|.+..+ .
T Consensus 142 ~~~~~~~a~~~~~~Gf~~vKik~~----------~-----------------~~~~e~v~avr~~~g~~~~l~vDan--~ 192 (368)
T 1sjd_A 142 IPQLLDVVGGYLDEGYVRIKLKIE----------P-----------------GWDVEPVRAVRERFGDDVLLQVDAN--T 192 (368)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECB----------T-----------------TBSHHHHHHHHHHHCTTSEEEEECT--T
T ss_pred HHHHHHHHHHHHHhCccEEEEecC----------c-----------------hhHHHHHHHHHHhcCCCceEEEecc--C
Confidence 466788999999999999999862 2 45679999999999986 4544333 2
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC
Q 025135 103 DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF 182 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i 182 (257)
. .+.++ .++++.|++.| ++|++ +|- .+......+.+++.+++||++.+.+
T Consensus 193 ~-------~~~~~-~~~~~~l~~~~------i~~iE--~P~--------------~~~~~~~~~~l~~~~~ipIa~dE~~ 242 (368)
T 1sjd_A 193 A-------YTLGD-APQLARLDPFG------LLLIE--QPL--------------EEEDVLGHAELARRIQTPICLDESI 242 (368)
T ss_dssp C-------CCGGG-HHHHHTTGGGC------CSEEE--CCS--------------CTTCHHHHHHHHTTCSSCEEESTTC
T ss_pred C-------CCHHH-HHHHHHHHhcC------CCeEe--CCC--------------ChhhHHHHHHHHHhCCCCEEECCCc
Confidence 2 24566 88999999999 88887 441 1223456678999999999999998
Q ss_pred -CHHHHHHHHHcCCCcEEEe
Q 025135 183 -TRELGIQALAEDGADLVAY 201 (257)
Q Consensus 183 -t~~~a~~~l~~g~~D~V~i 201 (257)
++++++++++++.+|+|.+
T Consensus 243 ~~~~~~~~~i~~~~~d~v~i 262 (368)
T 1sjd_A 243 VSARAAADAIKLGAVQIVNI 262 (368)
T ss_dssp CSHHHHHHHHHTTCCSEEEE
T ss_pred CCHHHHHHHHHcCCCCEEEe
Confidence 8999999999999999998
No 75
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=99.13 E-value=6.1e-10 Score=103.03 Aligned_cols=140 Identities=14% Similarity=0.140 Sum_probs=106.4
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCC-c-hhhHhhHHHHHHHHHHHHhCCC-eEEEEEcc
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGG-S-IENRCRFLMQLVREVIVAIGAD-RVGVRMSP 100 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGG-s-~enR~r~~~eiv~aiR~~vg~~-~v~vrls~ 100 (257)
.+++++.|+.+.+.||..++|+.++.|- .++| . .....+-..++|++||+++|++ +|.++.+.
T Consensus 152 ~e~~~~~a~~~~~~G~~~~KlK~g~~~~--------------~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~ 217 (404)
T 4e5t_A 152 ADMAAEAAAKAVDQGFTAVKFDPAGAYT--------------IYDGHQPSLEDLERSEAFCKQIRAAVGTKADLLFGTHG 217 (404)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCSCCCB--------------TTCSBCCCHHHHHHHHHHHHHHHHHHGGGSEEEECCCS
T ss_pred HHHHHHHHHHHHHcCCCEEeeCCCCCCc--------------ccccccccHHHHHHHHHHHHHHHHHcCCCCeEEEeCCC
Confidence 4567777888888999999999875211 1122 1 1223567889999999999987 67777663
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeC
Q 025135 101 AIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSG 180 (257)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G 180 (257)
. .+.++++++++.|++.| ++|++ +|. .+.....++.+++.+++||++.+
T Consensus 218 --~-------~~~~~A~~~~~~l~~~~------i~~iE--eP~--------------~~~~~~~~~~l~~~~~iPIa~dE 266 (404)
T 4e5t_A 218 --Q-------FTVSGAKRLARRLEAYD------PLWFE--EPI--------------PPEKPEDMAEVARYTSIPVATGE 266 (404)
T ss_dssp --C-------BCHHHHHHHHHHHGGGC------CSEEE--CCS--------------CTTCHHHHHHHHHHCSSCEEECT
T ss_pred --C-------cCHHHHHHHHHHHhhcC------CcEEE--CCC--------------CcccHHHHHHHHhhCCCCEEeCC
Confidence 1 35789999999999999 89997 441 12234567889999999999999
Q ss_pred CC-CHHHHHHHHHcCCCcEEEechHHhhC
Q 025135 181 GF-TRELGIQALAEDGADLVAYGRLFISN 208 (257)
Q Consensus 181 ~i-t~~~a~~~l~~g~~D~V~igR~~iad 208 (257)
.+ ++++++++++.|.+|+|.+--..+.=
T Consensus 267 ~~~~~~~~~~~i~~~a~d~v~~d~~~~GG 295 (404)
T 4e5t_A 267 RLCTKYEFSRVLETGAASILQMNLGRVGG 295 (404)
T ss_dssp TCCHHHHHHHHHHHTCCSEECCCTTTSSC
T ss_pred CcCCHHHHHHHHHhCCCCEEecCccccCC
Confidence 98 89999999999999999886555433
No 76
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=99.13 E-value=6.8e-10 Score=102.39 Aligned_cols=139 Identities=13% Similarity=0.093 Sum_probs=109.1
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCCEEEe-cccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEE
Q 025135 18 SEIPEVIDQYRQAALNAIQAGFDGIEI-HGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVG 95 (257)
Q Consensus 18 ~eI~~ii~~f~~AA~~a~~aGfDgVEI-h~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~ 95 (257)
.+.+++++++++.|+.+++.||..++| ..|.+ +.+ .+-..++|++||+++|++ +|.
T Consensus 147 ~~~~~~i~~~~~~a~~~~~~G~~~~K~~k~g~~------------------~~~----~~~d~~~v~avR~a~G~d~~l~ 204 (394)
T 3mqt_A 147 ATLSEIVEAYKPLIAKAKERGAKAVKVCIIPND------------------KVS----DKEIVAYLRELREVIGWDMDMM 204 (394)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCSEEEEECCCCT------------------TSC----HHHHHHHHHHHHHHHCSSSEEE
T ss_pred cchhhhHHHHHHHHHHHHHcCCCEEEecccCCC------------------ccC----HHHHHHHHHHHHHHhCCCCeEE
Confidence 357888889999999999999999999 44431 012 345678999999999987 688
Q ss_pred EEEccCCCCCCCCCCC-cHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCC
Q 025135 96 VRMSPAIDHLDATDSD-PLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQG 174 (257)
Q Consensus 96 vrls~~~~~~~~~~~~-~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~ 174 (257)
++.+. . . +.++++++++.|++.| ++|++ +|. .+.....++.+++.+++
T Consensus 205 vDan~--~-------~~~~~~A~~~~~~L~~~~------i~~iE--eP~--------------~~~~~~~~~~l~~~~~i 253 (394)
T 3mqt_A 205 VDCLY--R-------WTDWQKARWTFRQLEDID------LYFIE--ACL--------------QHDDLIGHQKLAAAINT 253 (394)
T ss_dssp EECTT--C-------CSCHHHHHHHHHHTGGGC------CSEEE--SCS--------------CTTCHHHHHHHHHHSSS
T ss_pred EECCC--C-------CCCHHHHHHHHHHHhhcC------CeEEE--CCC--------------CcccHHHHHHHHhhCCC
Confidence 77763 1 3 5788999999999999 89997 441 11234566789999999
Q ss_pred cEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCc
Q 025135 175 TFICSGGF-TRELGIQALAEDGADLVAYGRLFISNP 209 (257)
Q Consensus 175 pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~iadP 209 (257)
||++.+.+ ++++++++++.|.+|+|.+--..+.-.
T Consensus 254 PIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGi 289 (394)
T 3mqt_A 254 RLCGAEMSTTRFEAQEWLEKTGISVVQSDYNRCGGV 289 (394)
T ss_dssp EEEECTTCCHHHHHHHHHHHHCCSEECCCTTTSSCH
T ss_pred CEEeCCCcCCHHHHHHHHHcCCCCeEecCccccCCH
Confidence 99999998 899999999999999999865554433
No 77
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=99.12 E-value=1e-09 Score=101.82 Aligned_cols=140 Identities=13% Similarity=0.125 Sum_probs=106.0
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCch-hhHhhHHHHHHHHHHHHhCCC-eEEEEEccC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSI-ENRCRFLMQLVREVIVAIGAD-RVGVRMSPA 101 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~-enR~r~~~eiv~aiR~~vg~~-~v~vrls~~ 101 (257)
.+++++.|+.+.+.||..+.|+.++.|- ...|... ....+...++|++||+++|++ +|.++.+.
T Consensus 145 ~e~~~~~a~~~~~~G~~~iKlK~g~~~~-------------~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDaN~- 210 (412)
T 4e4u_A 145 PDLAAECAAENVKLGFTAVKFDPAGPYT-------------AYSGHQLSLEVLDRCELFCRRVREAVGSKADLLFGTHG- 210 (412)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCSCCCB-------------TTCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCS-
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCCc-------------cccccccchhhHHHHHHHHHHHHHHhCCCCeEEEECCC-
Confidence 4667778888889999999999876321 0112111 223567889999999999987 68777663
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCC
Q 025135 102 IDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGG 181 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~ 181 (257)
. .+.+++.++++.|++.| ++|++ +|. .+.....++.+++.+++||++.+.
T Consensus 211 -~-------~~~~~A~~~~~~L~~~~------i~~iE--eP~--------------~~~d~~~~~~l~~~~~iPIa~dE~ 260 (412)
T 4e4u_A 211 -Q-------MVPSSAIRLAKRLEKYD------PLWFE--EPV--------------PPGQEEAIAQVAKHTSIPIATGER 260 (412)
T ss_dssp -C-------BCHHHHHHHHHHHGGGC------CSEEE--CCS--------------CSSCHHHHHHHHHTCSSCEEECTT
T ss_pred -C-------CCHHHHHHHHHHhhhcC------CcEEE--CCC--------------ChhhHHHHHHHHhhCCCCEEecCc
Confidence 1 35788999999999999 89997 541 112345677899999999999999
Q ss_pred C-CHHHHHHHHHcCCCcEEEechHHhh
Q 025135 182 F-TRELGIQALAEDGADLVAYGRLFIS 207 (257)
Q Consensus 182 i-t~~~a~~~l~~g~~D~V~igR~~ia 207 (257)
+ ++++++++|+.+.+|+|.+--..+.
T Consensus 261 ~~~~~~~~~~i~~~a~d~v~~d~~~~G 287 (412)
T 4e4u_A 261 LTTKYEFHKLLQAGGASILQLNVARVG 287 (412)
T ss_dssp CCHHHHHHHHHHTTCCSEECCCTTTTT
T ss_pred cCCHHHHHHHHHcCCCCEEEeCccccC
Confidence 8 8999999999999999988554443
No 78
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=99.11 E-value=8.6e-10 Score=101.90 Aligned_cols=159 Identities=8% Similarity=0.019 Sum_probs=110.1
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccc-hhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGY-LIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPA 101 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~Gy-Ll~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~ 101 (257)
.+++++.|+.+.+.||..+.|+.|..- --+. .|..+.......=+...-.+...++|++||+++|++ +|.++.+..
T Consensus 134 ~e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~~ 211 (401)
T 3sbf_A 134 MEGIYDLVEGFLEKGYKHIRCQLGFYGGVPTD--LHTTQNPTEGSYYDQDQYMDNTLTMFKSLREKYGNQFHILHDVHER 211 (401)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEESCCCSCGGG--SCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTTSSEEEEECTTC
T ss_pred HHHHHHHHHHHHHcCCCEEEEeeccCCccccc--ccccccccccccccchHHHHHHHHHHHHHHHHcCCCCEEEEECCCC
Confidence 466777788888999999999987510 0000 010000000000012334788999999999999987 788877631
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCC
Q 025135 102 IDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGG 181 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~ 181 (257)
.+.++++++++.|++.| ++||+ +|.. +.....++.+++.+++||++.+.
T Consensus 212 ---------~~~~~A~~~~~~L~~~~------i~~iE--qP~~--------------~~~~~~~~~l~~~~~iPIa~dE~ 260 (401)
T 3sbf_A 212 ---------LFPNQAIQFAKEVEQYK------PYFIE--DILP--------------PNQTEWLDNIRSQSSVSLGLGEL 260 (401)
T ss_dssp ---------SCHHHHHHHHHHHGGGC------CSCEE--CSSC--------------TTCGGGHHHHHTTCCCCEEECTT
T ss_pred ---------CCHHHHHHHHHHHHhcC------CCEEE--CCCC--------------hhHHHHHHHHHhhCCCCEEeCCc
Confidence 35788999999999999 88887 5421 11223457789999999999999
Q ss_pred C-CHHHHHHHHHcCCCcEEEechHHhhCchHHHHH
Q 025135 182 F-TRELGIQALAEDGADLVAYGRLFISNPDLVLRF 215 (257)
Q Consensus 182 i-t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~ 215 (257)
+ ++++++++++.+.+|+|.+--..+.=..=..|+
T Consensus 261 ~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~ki 295 (401)
T 3sbf_A 261 FNNPEEWKSLIANRRIDFIRCHVSQIGGITPALKL 295 (401)
T ss_dssp CCSHHHHHHHHHTTCCSEECCCGGGGTSHHHHHHH
T ss_pred cCCHHHHHHHHhcCCCCEEecCccccCCHHHHHHH
Confidence 8 899999999999999999876555444333333
No 79
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=99.11 E-value=8.8e-10 Score=102.58 Aligned_cols=152 Identities=11% Similarity=0.083 Sum_probs=105.3
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCC--------chhhHhhHHHHHHHHHHHHhCCC-eE
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGG--------SIENRCRFLMQLVREVIVAIGAD-RV 94 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGG--------s~enR~r~~~eiv~aiR~~vg~~-~v 94 (257)
.+++++.|+.+++.||..+.|+.|...+...|-.+..+...+...+ +.+...+...++|++||+++|++ +|
T Consensus 150 ~e~~~~~a~~~~~~Gf~~iKlKvG~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~avR~avG~d~~l 229 (424)
T 3v3w_A 150 LDSTLEAVRKAKDKGYKAIRVQCGIPGIAKTYGVSTNTKSYEPADADLPSVEVWSTEKYLNYIPDVFAAVRKEFGPDIHL 229 (424)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCC-----CCSCCBSSCCEEEECHHHHHHHHHHHHHHHHHHHCSSSEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEeccCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHcCCCCcE
Confidence 4667778888889999999999875110000000000000000000 11123677899999999999987 78
Q ss_pred EEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCC
Q 025135 95 GVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQG 174 (257)
Q Consensus 95 ~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~ 174 (257)
.++.+.. .+.++++++++.|++.| ++||+ +|.. +.....++.+++.+++
T Consensus 230 ~vDaN~~---------~~~~~A~~~~~~L~~~~------i~~iE--qP~~--------------~~d~~~~~~l~~~~~i 278 (424)
T 3v3w_A 230 LHDVHHR---------LTPIEAARLGKALEPYH------LFWME--DAVP--------------AENQESFKLIRQHTTT 278 (424)
T ss_dssp EEECTTC---------CCHHHHHHHHHHHGGGC------CSEEE--CCSC--------------CSSTTHHHHHHHHCCS
T ss_pred EEeCCCC---------CCHHHHHHHHHHHHhcC------CCEEE--CCCC--------------hHhHHHHHHHHhhCCC
Confidence 8877631 35789999999999999 89997 4421 1122456778999999
Q ss_pred cEEEeCCC-CHHHHHHHHHcCCCcEEEechHHh
Q 025135 175 TFICSGGF-TRELGIQALAEDGADLVAYGRLFI 206 (257)
Q Consensus 175 pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~i 206 (257)
||++.+.+ ++++++++++.+.+|+|.+--..+
T Consensus 279 PIa~dE~~~~~~~~~~~i~~ga~d~v~~k~~~~ 311 (424)
T 3v3w_A 279 PLAVGEVFNSIHDCRELIQNQWIDYIRTTIVHA 311 (424)
T ss_dssp CEEECTTCCSGGGTHHHHHTTCCSEECCCTTTT
T ss_pred CEEEccCcCCHHHHHHHHHcCCCCeEeecchhc
Confidence 99999998 899999999999999999865544
No 80
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=99.11 E-value=1.3e-09 Score=99.78 Aligned_cols=151 Identities=15% Similarity=0.015 Sum_probs=100.4
Q ss_pred HHHHHHHHHHcCCCEEEecccccch-------hhhcCCCC-c---CCcCC-------CCCCch------hhHhhHHHHHH
Q 025135 27 YRQAALNAIQAGFDGIEIHGAHGYL-------IDQFLKDG-I---NDRTD-------EYGGSI------ENRCRFLMQLV 82 (257)
Q Consensus 27 f~~AA~~a~~aGfDgVEIh~a~GyL-------l~qFlSp~-~---N~R~D-------~yGGs~------enR~r~~~eiv 82 (257)
..+.++++.++|++.|+|+..|-.. -+.|--|. . |...+ .-|..+ ....++..+.|
T Consensus 138 ~~~~~~~a~~~G~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~~~~~i 217 (370)
T 1gox_A 138 VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLSWKDV 217 (370)
T ss_dssp HHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHHHHHHTBCTTCCHHHH
T ss_pred HHHHHHHHHHCCCCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhhccccccCccHHHHHHhhcCccchHHHH
Confidence 3567778889999999999998433 12221111 0 11111 112222 12235567889
Q ss_pred HHHHHHhCCCeEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHH
Q 025135 83 REVIVAIGADRVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEA 162 (257)
Q Consensus 83 ~aiR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~ 162 (257)
+++|+.++. ||.+|... +. +.++.+.++| +|+|.++...-.+ .. ......
T Consensus 218 ~~l~~~~~~-pv~vK~~~-----------~~----e~a~~a~~~G------ad~I~vs~~ggr~----~~----~~~~~~ 267 (370)
T 1gox_A 218 AWLQTITSL-PILVKGVI-----------TA----EDARLAVQHG------AAGIIVSNHGARQ----LD----YVPATI 267 (370)
T ss_dssp HHHHHHCCS-CEEEECCC-----------SH----HHHHHHHHTT------CSEEEECCGGGTS----ST----TCCCHH
T ss_pred HHHHHHhCC-CEEEEecC-----------CH----HHHHHHHHcC------CCEEEECCCCCcc----CC----CcccHH
Confidence 999999854 88888763 23 3467888999 9999985421101 00 112345
Q ss_pred HHHHHHHHHh--CCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhC
Q 025135 163 QLLRTWRRSY--QGTFICSGGF-TRELGIQALAEDGADLVAYGRLFISN 208 (257)
Q Consensus 163 ~~~~~ir~~~--~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~iad 208 (257)
..+..+++.+ ++|||++||| +.+++.++|..| ||+|++||+++..
T Consensus 268 ~~l~~v~~~~~~~ipvia~GGI~~~~D~~k~l~~G-AdaV~iGr~~l~~ 315 (370)
T 1gox_A 268 MALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALG-AAGVFIGRPVVFS 315 (370)
T ss_dssp HHHHHHHHHTTTSSCEEEESSCCSHHHHHHHHHHT-CSEEEECHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEEECCCCCHHHHHHHHHcC-CCEEeecHHHHHH
Confidence 6677888888 6999999999 899999999988 9999999999964
No 81
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=99.09 E-value=1.3e-09 Score=101.35 Aligned_cols=160 Identities=8% Similarity=-0.019 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAI 102 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~ 102 (257)
.+++++.|+.+++.||..|.|+.|..-.-..- .|..|.-.....=+.....+...++|++||+++|++ +|.++.+.
T Consensus 155 ~e~~~~~a~~~~~~G~~~iKlKvG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~e~v~avR~avG~d~~L~vDaN~-- 231 (422)
T 3tji_A 155 LEALFASVDALIAQGYRHIRCQLGFYGGTPSA-LHAPDNPTPGAWFDQQEYMSNTVEMFHALREKYGWKLHILHDVHE-- 231 (422)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEESCCCBCGGG-SCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHCSSSEEEEECTT--
T ss_pred HHHHHHHHHHHHHcCCCEEEEeeccCCccccc-ccccccccccccccchhHHHHHHHHHHHHHHHcCCCCEEEEECCC--
Confidence 45677788888899999999998751000000 010000000000012344788999999999999987 78888773
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC
Q 025135 103 DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF 182 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i 182 (257)
. .+.++++++++.|++.| ++||+ +|. .+.....++.+++.+++||++.+.+
T Consensus 232 ~-------~~~~~A~~~~~~Le~~~------i~~iE--qP~--------------~~~d~~~~~~l~~~~~iPIa~dE~~ 282 (422)
T 3tji_A 232 R-------LFPQQAVQLAKQLEPFQ------PYFIE--DIL--------------PPQQSAWLEQVRQQSCVPLALGELF 282 (422)
T ss_dssp C-------SCHHHHHHHHHHHGGGC------CSEEE--CCS--------------CGGGGGGHHHHHHHCCCCEEECTTC
T ss_pred C-------CCHHHHHHHHHHHHhhC------CCeEE--CCC--------------ChhhHHHHHHHHhhCCCCEEEeCCc
Confidence 1 35788999999999999 89997 541 1222345677999999999999998
Q ss_pred -CHHHHHHHHHcCCCcEEEechHHhhCchHHHHH
Q 025135 183 -TRELGIQALAEDGADLVAYGRLFISNPDLVLRF 215 (257)
Q Consensus 183 -t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~ 215 (257)
++++++++++.+.+|+|.+--..+.-..=..|+
T Consensus 283 ~~~~~~~~ll~~ga~d~v~~k~~~~GGit~~~ki 316 (422)
T 3tji_A 283 NNPAEWHDLIVNRRIDFIRCHVSQIGGITPALKL 316 (422)
T ss_dssp CSGGGTHHHHHTTCCSEECCCGGGGTSHHHHHHH
T ss_pred CCHHHHHHHHhcCCCCEEecCccccCCHHHHHHH
Confidence 899999999999999999866555444333343
No 82
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=99.09 E-value=1.9e-09 Score=99.39 Aligned_cols=135 Identities=10% Similarity=0.024 Sum_probs=106.4
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCEEEe-cccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEE
Q 025135 19 EIPEVIDQYRQAALNAIQAGFDGIEI-HGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGV 96 (257)
Q Consensus 19 eI~~ii~~f~~AA~~a~~aGfDgVEI-h~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~v 96 (257)
+.+++++++++.|+.+++.||..+.| ..|.. ..+ .+-..++|++||+++|++ +|.+
T Consensus 153 ~~~~~~~~~~~~a~~~~~~G~~~~K~~k~g~~------------------~~~----~~~d~e~v~avR~a~G~d~~l~v 210 (394)
T 3mkc_A 153 SLDVAIKGYAPLLEKAKAHNIRAVKVCVPIKA------------------DWS----TKEVAYYLRELRGILGHDTDMMV 210 (394)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCSEEEEECCTTC------------------CCC----HHHHHHHHHHHHHHHCSSSEEEE
T ss_pred chhhhHHHHHHHHHHHHHcCCCEEEeCccCCC------------------ccC----HHHHHHHHHHHHHHhCCCCeEEE
Confidence 56788889999999999999999999 44420 012 344678999999999987 6777
Q ss_pred EEccCCCCCCCCCCC-cHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCc
Q 025135 97 RMSPAIDHLDATDSD-PLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGT 175 (257)
Q Consensus 97 rls~~~~~~~~~~~~-~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~p 175 (257)
+.+. . . +.++++++++.|++.| ++|++ +|. .+.....++.+++.+++|
T Consensus 211 DaN~--~-------~~~~~~A~~~~~~L~~~~------i~~iE--eP~--------------~~~d~~~~~~l~~~~~iP 259 (394)
T 3mkc_A 211 DYLY--R-------FTDWYEVARLLNSIEDLE------LYFAE--ATL--------------QHDDLSGHAKLVENTRSR 259 (394)
T ss_dssp ECTT--C-------CCCHHHHHHHHHHTGGGC------CSEEE--SCS--------------CTTCHHHHHHHHHHCSSC
T ss_pred eCCC--C-------CCCHHHHHHHHHHhhhcC------CeEEE--CCC--------------CchhHHHHHHHHhhCCCC
Confidence 7663 1 3 5788999999999999 89987 441 112345667899999999
Q ss_pred EEEeCCC-CHHHHHHHHHcCCCcEEEechHHh
Q 025135 176 FICSGGF-TRELGIQALAEDGADLVAYGRLFI 206 (257)
Q Consensus 176 vi~~G~i-t~~~a~~~l~~g~~D~V~igR~~i 206 (257)
|++.+.+ ++++++++++.|.+|+|.+--..+
T Consensus 260 Ia~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~ 291 (394)
T 3mkc_A 260 ICGAEMSTTRFEAEEWITKGKVHLLQSDYNRC 291 (394)
T ss_dssp BEECTTCCHHHHHHHHHHTTCCSEECCCTTTT
T ss_pred EEeCCCCCCHHHHHHHHHcCCCCeEecCcccc
Confidence 9999998 899999999999999999854443
No 83
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=99.09 E-value=8.6e-10 Score=102.46 Aligned_cols=151 Identities=13% Similarity=0.044 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCC--cCCCCCC-------chhhHhhHHHHHHHHHHHHhCCC-e
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGIND--RTDEYGG-------SIENRCRFLMQLVREVIVAIGAD-R 93 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~--R~D~yGG-------s~enR~r~~~eiv~aiR~~vg~~-~ 93 (257)
.+++++.|+.+++.||..+.|+.|..-....|-.+ .++ ....-|+ +.....+...++|++||+++|++ +
T Consensus 144 ~e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~~~g~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~v~avR~a~G~d~~ 222 (418)
T 3r4e_A 144 IAETVEAVGHYIDMGYKAIRAQTGVPGIKDAYGVG-RGKLYYEPADASLPSVTGWDTRKALNYVPKLFEELRKTYGFDHH 222 (418)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEECCTTC-------------------CCCCEEEECHHHHHHHHHHHHHHHHHHHCSSSE
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCcccccccccc-ccccccccccccccccccccchhHHHHHHHHHHHHHHHcCCCCe
Confidence 46677888888899999999998751000000000 000 0000000 11223567889999999999987 6
Q ss_pred EEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhC
Q 025135 94 VGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQ 173 (257)
Q Consensus 94 v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~ 173 (257)
|.++.+. . .+.++++++++.|++.| ++||+ +|.. +.....++.+++.++
T Consensus 223 l~vDaN~--~-------~~~~~A~~~~~~L~~~~------i~~iE--qP~~--------------~~d~~~~~~l~~~~~ 271 (418)
T 3r4e_A 223 LLHDGHH--R-------YTPQEAANLGKMLEPYQ------LFWLE--DCTP--------------AENQEAFRLVRQHTV 271 (418)
T ss_dssp EEEECTT--C-------SCHHHHHHHHHHHGGGC------CSEEE--SCSC--------------CSSGGGGHHHHHHCC
T ss_pred EEEeCCC--C-------CCHHHHHHHHHHHHhhC------CCEEE--CCCC--------------ccCHHHHHHHHhcCC
Confidence 8887763 1 35788999999999999 89997 5421 111234567899999
Q ss_pred CcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHh
Q 025135 174 GTFICSGGF-TRELGIQALAEDGADLVAYGRLFI 206 (257)
Q Consensus 174 ~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~i 206 (257)
+||++.+.+ ++++++++|+.+.+|+|.+--..+
T Consensus 272 iPIa~dE~~~~~~~~~~~l~~~a~d~v~~k~~~~ 305 (418)
T 3r4e_A 272 TPLAVGEIFNTIWDAKDLIQNQLIDYIRATVVGA 305 (418)
T ss_dssp SCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTT
T ss_pred CCEEEcCCcCCHHHHHHHHHcCCCCeEecCcccc
Confidence 999999998 899999999999999999865444
No 84
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=99.09 E-value=1.3e-09 Score=100.45 Aligned_cols=153 Identities=14% Similarity=0.042 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHcCCCEEEecccccch-------hhhcCCC-Cc---CCcCC----C-----CCCc----hhh---HhhHH
Q 025135 26 QYRQAALNAIQAGFDGIEIHGAHGYL-------IDQFLKD-GI---NDRTD----E-----YGGS----IEN---RCRFL 78 (257)
Q Consensus 26 ~f~~AA~~a~~aGfDgVEIh~a~GyL-------l~qFlSp-~~---N~R~D----~-----yGGs----~en---R~r~~ 78 (257)
...+.+++|+++||+++.|+.+|-.. .+.|--| .. |--.. . .+|+ +.. +.++.
T Consensus 161 ~~~~~~~ra~~~G~~al~itvd~p~~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~~~~~~~~~~~d~~~~ 240 (392)
T 2nzl_A 161 VTKKLVRQAEKMGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKAIDPSIS 240 (392)
T ss_dssp HHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHTCCCCTTCCCTTC-----------------CHHHHHHHHBCTTCC
T ss_pred HHHHHHHHHHHCCCCEEEEeCCCCCccchhHhHhhccCCccccchhhhhhhhcccCccccccCcchHHHHHhhcCChHHH
Confidence 34577788899999999999888432 2222111 11 21000 0 1222 222 45578
Q ss_pred HHHHHHHHHHhCCCeEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCc
Q 025135 79 MQLVREVIVAIGADRVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTE 158 (257)
Q Consensus 79 ~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~ 158 (257)
.++|++||+.++. ||.+|... +. +.++.++++| +|+|.+++....+.. ..
T Consensus 241 ~~~i~~lr~~~~~-PvivKgv~-----------~~----e~A~~a~~aG------ad~I~vs~~ggr~~~--------~g 290 (392)
T 2nzl_A 241 WEDIKWLRRLTSL-PIVAKGIL-----------RG----DDAREAVKHG------LNGILVSNHGARQLD--------GV 290 (392)
T ss_dssp HHHHHHHC--CCS-CEEEEEEC-----------CH----HHHHHHHHTT------CCEEEECCGGGTSST--------TC
T ss_pred HHHHHHHHHhhCC-CEEEEecC-----------CH----HHHHHHHHcC------CCEEEeCCCCCCcCC--------CC
Confidence 8999999999853 89999542 23 3477889999 999998643211110 11
Q ss_pred hhHHHHHHHHHHHh--CCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCc
Q 025135 159 DEEAQLLRTWRRSY--QGTFICSGGF-TRELGIQALAEDGADLVAYGRLFISNP 209 (257)
Q Consensus 159 ~~~~~~~~~ir~~~--~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~iadP 209 (257)
+.....+..+++.+ ++|||++||| +.+++.++|.-| ||+|++||+++...
T Consensus 291 ~~~~~~l~~v~~av~~~ipVia~GGI~~g~Dv~kalalG-Ad~V~iGr~~l~~~ 343 (392)
T 2nzl_A 291 PATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALG-AKAVFVGRPIVWGL 343 (392)
T ss_dssp CCHHHHHHHHHHHHTTSSEEEECSSCCSHHHHHHHHHTT-CSEEEECHHHHHHH
T ss_pred cChHHHHHHHHHHcCCCCEEEEECCCCCHHHHHHHHHhC-CCeeEECHHHHHHH
Confidence 23346677888887 4899999999 999999999987 99999999999754
No 85
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=99.08 E-value=7.8e-10 Score=103.00 Aligned_cols=152 Identities=13% Similarity=0.023 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCC----CC----chhhHhhHHHHHHHHHHHHhCCC-eE
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEY----GG----SIENRCRFLMQLVREVIVAIGAD-RV 94 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~y----GG----s~enR~r~~~eiv~aiR~~vg~~-~v 94 (257)
.+++++.|+.+++.||..+.|+.|..-+...+-.+..+...+.- -+ +.....+...++|++||+++|++ +|
T Consensus 151 ~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~avR~a~G~d~~l 230 (425)
T 3vcn_A 151 IEDTIAEAVKYKAMGYKAIRLQTGVPGLASTYGVSKDKMFYEPADNDLPTENIWSTAKYLNSVPKLFERAREVLGWDVHL 230 (425)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCSSCSSCCCCCCBSSCCEEEECHHHHHTTTHHHHHHHHHHHCSSSEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEeecCccccccccccccccccCcccccccccccccchhHHHHHHHHHHHHHHHcCCCCEE
Confidence 46677788888899999999998741110000000000000000 00 01122566789999999999987 68
Q ss_pred EEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCC
Q 025135 95 GVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQG 174 (257)
Q Consensus 95 ~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~ 174 (257)
.++.+. . .+.++++++++.|++.| ++||+ +|.. +.....++.+++.+++
T Consensus 231 ~vDaN~--~-------~~~~~A~~~~~~L~~~~------i~~iE--qP~~--------------~~d~~~~~~l~~~~~i 279 (425)
T 3vcn_A 231 LHDVHH--R-------LTPIEAARLGKDLEPYR------LFWLE--DSVP--------------AENQAGFRLIRQHTTT 279 (425)
T ss_dssp EEECTT--C-------CCHHHHHHHHHHHGGGC------CSEEE--CCSC--------------CSSTTHHHHHHHHCCS
T ss_pred EEECCC--C-------CCHHHHHHHHHHHHhcC------CCEEE--CCCC--------------hhhHHHHHHHHhcCCC
Confidence 877763 1 35789999999999999 89997 4421 1122456778999999
Q ss_pred cEEEeCCC-CHHHHHHHHHcCCCcEEEechHHh
Q 025135 175 TFICSGGF-TRELGIQALAEDGADLVAYGRLFI 206 (257)
Q Consensus 175 pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~i 206 (257)
||++.+.+ ++++++++++.+.+|+|.+--..+
T Consensus 280 PIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~ 312 (425)
T 3vcn_A 280 PLAVGEIFAHVWDAKQLIEEQLIDYLRATVLHA 312 (425)
T ss_dssp CEEECTTCCSGGGTHHHHHTTCCSEECCCTTTT
T ss_pred CEEeCCCcCCHHHHHHHHHcCCCCeEecChhhc
Confidence 99999998 899999999999999999865544
No 86
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=99.08 E-value=1.9e-09 Score=98.92 Aligned_cols=134 Identities=12% Similarity=0.061 Sum_probs=108.3
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAI 102 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~ 102 (257)
.+++++.|+.+.+.||+.|+|+.|+ + ..-..++|++||+++|++ +|.++.+.
T Consensus 146 ~e~~~~~a~~~~~~G~~~iKiK~G~---------------------~----~~~d~~~v~avR~a~g~~~~l~vDan~-- 198 (378)
T 3eez_A 146 VEETRAVIDRYRQRGYVAHSVKIGG---------------------D----VERDIARIRDVEDIREPGEIVLYDVNR-- 198 (378)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCS---------------------C----HHHHHHHHHHHTTSCCTTCEEEEECTT--
T ss_pred HHHHHHHHHHHHhCCCCEEEeccCC---------------------C----HHHHHHHHHHHHHHcCCCceEEEECCC--
Confidence 3567777888889999999999875 1 234678999999999987 68887763
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC
Q 025135 103 DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF 182 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i 182 (257)
. .+.+++.++++.|++.+ + ||+ +|. . ....++.+++.+++||++.+.+
T Consensus 199 ~-------~~~~~a~~~~~~l~~~~------i-~iE--qP~--------------~--~~~~~~~l~~~~~iPIa~dE~~ 246 (378)
T 3eez_A 199 G-------WTRQQALRVMRATEDLH------V-MFE--QPG--------------E--TLDDIAAIRPLHSAPVSVDECL 246 (378)
T ss_dssp C-------CCHHHHHHHHHHTGGGT------C-CEE--CCS--------------S--SHHHHHHTGGGCCCCEEECTTC
T ss_pred C-------CCHHHHHHHHHHhccCC------e-EEe--cCC--------------C--CHHHHHHHHhhCCCCEEECCCC
Confidence 2 35788999999999998 8 886 441 1 2355677899999999999998
Q ss_pred -CHHHHHHHHHcCCCcEEEechHHhhCchHHHHHH
Q 025135 183 -TRELGIQALAEDGADLVAYGRLFISNPDLVLRFK 216 (257)
Q Consensus 183 -t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~ 216 (257)
++++++++++.+.+|+|.+-...+.-+.-..|+.
T Consensus 247 ~~~~~~~~~l~~~~~d~v~ik~~~~GGit~~~~ia 281 (378)
T 3eez_A 247 VTLQDAARVARDGLAEVFGIKLNRVGGLTRAARMR 281 (378)
T ss_dssp CSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHHH
Confidence 8999999999999999999999988887666654
No 87
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=99.07 E-value=1.1e-09 Score=100.96 Aligned_cols=123 Identities=12% Similarity=0.053 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAI 102 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~ 102 (257)
.+++++.|+++.+.||+.++|+.|+ + .+-..++|++||+++|++ +|.++.+..
T Consensus 156 ~e~~~~~a~~~~~~G~~~iKlK~g~---------------------~----~~~d~~~v~avR~a~g~~~~l~vDaN~~- 209 (392)
T 3ddm_A 156 PENPEDVVARKAAEGYRAFKLKVGF---------------------D----DARDVRNALHVRELLGAATPLMADANQG- 209 (392)
T ss_dssp SSSHHHHHHHHHHHTCCCEEEECSS---------------------C----HHHHHHHHHHHHHHHCSSSCEEEECTTC-
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCC---------------------C----HHHHHHHHHHHHHhcCCCceEEEeCCCC-
Confidence 3567888888999999999999874 1 234678999999999987 688887642
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhH-HHHHHHHHHHhCCcEEEeCC
Q 025135 103 DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEE-AQLLRTWRRSYQGTFICSGG 181 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ir~~~~~pvi~~G~ 181 (257)
.+.+++.++++.|++.| ++||+ +|. .+.. ...++.+++.+++||++.+.
T Consensus 210 --------~~~~~A~~~~~~L~~~~------i~~iE--eP~--------------~~~d~~~~~~~l~~~~~iPIa~dE~ 259 (392)
T 3ddm_A 210 --------WDLPRARQMAQRLGPAQ------LDWLE--EPL--------------RADRPAAEWAELAQAAPMPLAGGEN 259 (392)
T ss_dssp --------CCHHHHHHHHHHHGGGC------CSEEE--CCS--------------CTTSCHHHHHHHHHHCSSCEEECTT
T ss_pred --------CCHHHHHHHHHHHHHhC------CCEEE--CCC--------------CccchHHHHHHHHHhcCCCEEeCCC
Confidence 35788999999999999 89997 541 1222 45667899999999999999
Q ss_pred C-CHHHHHHHHHcCCCcEEEec
Q 025135 182 F-TRELGIQALAEDGADLVAYG 202 (257)
Q Consensus 182 i-t~~~a~~~l~~g~~D~V~ig 202 (257)
+ ++++++++++.+.+|+|.+-
T Consensus 260 ~~~~~~~~~~i~~~a~d~v~~k 281 (392)
T 3ddm_A 260 IAGVAAFETALAARSLRVMQPD 281 (392)
T ss_dssp CCSHHHHHHHHHHTCEEEECCC
T ss_pred CCCHHHHHHHHHcCCCCEEEeC
Confidence 8 89999999999999999984
No 88
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=99.07 E-value=2.5e-09 Score=99.07 Aligned_cols=136 Identities=13% Similarity=0.065 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCC--C------Cc---hhhHhhHHHHHHHHHHHHhCCC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEY--G------GS---IENRCRFLMQLVREVIVAIGAD 92 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~y--G------Gs---~enR~r~~~eiv~aiR~~vg~~ 92 (257)
.+++++.|+.+++.||..+.|+.+. +.. .+...| | .. -...+|+..++|++||+++|++
T Consensus 144 ~e~~~~~a~~~~~~Gf~~iKlKv~~---------~~~-~~~~~~~pG~~~~~~~~~~~~~~~~~~~~e~v~avR~avG~d 213 (409)
T 3go2_A 144 LDGVKRTAEEARERQFRAIKTNIFI---------HDD-GPLHAWRPGFAVPFQPALNVDRKVLRNLRAHLEALRDGAGPD 213 (409)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECCEE---------CSS-SSCEECBGGGTBSCCTTCCCCHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHcCCCEEEEcccc---------ccc-ccccccccCCCccCCcccccchHHHHHHHHHHHHHHHHhCCC
Confidence 4566777788889999999998721 000 000001 1 00 0234789999999999999988
Q ss_pred -eEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHH
Q 025135 93 -RVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRS 171 (257)
Q Consensus 93 -~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~ 171 (257)
+|.++.+.. .+.++++++++.|++.| ++||+ .|. .....++.+++.
T Consensus 214 ~~l~vDaN~~---------~~~~~A~~~~~~L~~~~------i~~iE--~P~----------------~d~~~~~~l~~~ 260 (409)
T 3go2_A 214 VEILLDLNFN---------AKPEGYLKILRELADFD------LFWVE--IDS----------------YSPQGLAYVRNH 260 (409)
T ss_dssp SEEEEECTTC---------SCHHHHHHHHHHTTTSC------CSEEE--CCC----------------SCHHHHHHHHHT
T ss_pred CEEEEECCCC---------CCHHHHHHHHHHHhhcC------CeEEE--eCc----------------CCHHHHHHHHhh
Confidence 788877631 35788999999999999 89998 331 123456789999
Q ss_pred hCCcEEEeCCC-CHHHHHHHHHcCCCcEEEec
Q 025135 172 YQGTFICSGGF-TRELGIQALAEDGADLVAYG 202 (257)
Q Consensus 172 ~~~pvi~~G~i-t~~~a~~~l~~g~~D~V~ig 202 (257)
+++||++.+.+ ++++++++|+.+.+|+|.+=
T Consensus 261 ~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k 292 (409)
T 3go2_A 261 SPHPISSCETLFGIREFKPFFDANAVDVAIVD 292 (409)
T ss_dssp CSSCEEECTTCCHHHHHHHHHHTTCCSEEEEC
T ss_pred CCCCEEeCCCcCCHHHHHHHHHhCCCCEEEeC
Confidence 99999999998 89999999999999999874
No 89
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=99.06 E-value=3.5e-09 Score=96.22 Aligned_cols=135 Identities=16% Similarity=0.224 Sum_probs=105.4
Q ss_pred HHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCC
Q 025135 25 DQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAID 103 (257)
Q Consensus 25 ~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~ 103 (257)
+++++.|+.+.+.||..++|+.|+. .+--.+++++||+++|++ +|.++.+. .
T Consensus 141 ~~~~~~a~~~~~~G~~~~K~K~g~~-------------------------~~~d~~~v~avR~a~g~~~~l~vDan~--~ 193 (354)
T 3jva_A 141 NVMAQKAVEKVKLGFDTLKIKVGTG-------------------------IEADIARVKAIREAVGFDIKLRLDANQ--A 193 (354)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCSC-------------------------HHHHHHHHHHHHHHHCTTSEEEEECTT--C
T ss_pred HHHHHHHHHHHHhCCCeEEEEeCCC-------------------------HHHHHHHHHHHHHHcCCCCeEEEECCC--C
Confidence 4567777788889999999997651 134578999999999987 68887763 2
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-
Q 025135 104 HLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF- 182 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i- 182 (257)
.+.+++.++++.|++.+ ++||+ +|- .+.....++.+++.+++||++.+.+
T Consensus 194 -------~~~~~a~~~~~~L~~~~------i~~iE--qP~--------------~~~d~~~~~~l~~~~~iPIa~dE~~~ 244 (354)
T 3jva_A 194 -------WTPKDAVKAIQALADYQ------IELVE--QPV--------------KRRDLEGLKYVTSQVNTTIMADESCF 244 (354)
T ss_dssp -------SCHHHHHHHHHHTTTSC------EEEEE--CCS--------------CTTCHHHHHHHHHHCSSEEEESTTCC
T ss_pred -------CCHHHHHHHHHHHHhcC------CCEEE--CCC--------------ChhhHHHHHHHHHhCCCCEEEcCCcC
Confidence 35788999999999999 99997 541 1123456678999999999999998
Q ss_pred CHHHHHHHHHcCCCcEEEechHHhhCchHHHHH
Q 025135 183 TRELGIQALAEDGADLVAYGRLFISNPDLVLRF 215 (257)
Q Consensus 183 t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~ 215 (257)
++++++++++.+.+|+|.+--..+.-..=..|+
T Consensus 245 ~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~i 277 (354)
T 3jva_A 245 DAQDALELVKKGTVDVINIKLMKCGGIHEALKI 277 (354)
T ss_dssp SHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred CHHHHHHHHHcCCCCEEEECchhcCCHHHHHHH
Confidence 899999999999999999987766555433343
No 90
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=99.06 E-value=3.7e-09 Score=96.25 Aligned_cols=149 Identities=15% Similarity=0.133 Sum_probs=99.6
Q ss_pred CCCChhhHHHHH--------------HHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHH
Q 025135 13 QALQTSEIPEVI--------------DQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFL 78 (257)
Q Consensus 13 ~~lt~~eI~~ii--------------~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~ 78 (257)
+.+|.+++.+.+ +...+.++++.++|+|.|+|+.+||+. +.+
T Consensus 73 ~~~s~ee~~~~i~~~~~~~~~~~g~~~~~~e~~~~a~~aGvdvI~id~a~G~~------------------------~~~ 128 (361)
T 3r2g_A 73 RFMTIEENIQEFKKCKGPVFVSVGCTENELQRAEALRDAGADFFCVDVAHAHA------------------------KYV 128 (361)
T ss_dssp SCSCHHHHHHHHHTCCSCCBEEECSSHHHHHHHHHHHHTTCCEEEEECSCCSS------------------------HHH
T ss_pred CCCCHHHHHHHHhhcceEEEEEcCCCHHHHHHHHHHHHcCCCEEEEeCCCCCc------------------------HhH
Confidence 346676665544 345677888999999999999998741 246
Q ss_pred HHHHHHHHHHhCCCeEEEE-EccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCC-CcccCCCcCCCCCC
Q 025135 79 MQLVREVIVAIGADRVGVR-MSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQP-RYTAYGQTESGRPG 156 (257)
Q Consensus 79 ~eiv~aiR~~vg~~~v~vr-ls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~-~~~~~~~~~~~~~~ 156 (257)
.++|+.||++++.-+|.++ +. +.+ .++.+.++| +|+|.++.. ..........+ .
T Consensus 129 ~e~I~~ir~~~~~~~Vi~G~V~------------T~e----~A~~a~~aG------aD~I~Vg~g~G~~~~tr~~~g-~- 184 (361)
T 3r2g_A 129 GKTLKSLRQLLGSRCIMAGNVA------------TYA----GADYLASCG------ADIIKAGIGGGSVCSTRIKTG-F- 184 (361)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEC------------SHH----HHHHHHHTT------CSEEEECCSSSSCHHHHHHHC-C-
T ss_pred HHHHHHHHHhcCCCeEEEcCcC------------CHH----HHHHHHHcC------CCEEEEcCCCCcCccccccCC-c-
Confidence 7899999999864477775 32 233 467788999 899988421 11000000000 0
Q ss_pred CchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCchHH
Q 025135 157 TEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQALAEDGADLVAYGRLFISNPDLV 212 (257)
Q Consensus 157 ~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~iadP~l~ 212 (257)
..+ ....+..+++... |||+.||| ++.++.++|+.| ||+|++||+|+.-.+-+
T Consensus 185 g~p-~l~aI~~~~~~~~-PVIAdGGI~~~~di~kALa~G-Ad~V~iGr~f~~t~Esp 238 (361)
T 3r2g_A 185 GVP-MLTCIQDCSRADR-SIVADGGIKTSGDIVKALAFG-ADFVMIGGMLAGSAPTP 238 (361)
T ss_dssp CCC-HHHHHHHHTTSSS-EEEEESCCCSHHHHHHHHHTT-CSEEEESGGGTTBTTSS
T ss_pred cHH-HHHHHHHHHHhCC-CEEEECCCCCHHHHHHHHHcC-CCEEEEChHHhCCccCC
Confidence 011 2233333333333 99999999 899999999998 99999999999876543
No 91
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=99.06 E-value=1.7e-09 Score=100.12 Aligned_cols=135 Identities=12% Similarity=0.126 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAI 102 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~ 102 (257)
.+++++.|+.+.+.||..|.| .|. +.. ... +.....+-..++|++||+++|++ +|.+..+.
T Consensus 126 ~e~~~~~a~~~~~~G~~~iKl-~G~---------~~~-~~~-----~~~~~~~~d~e~v~avR~avG~d~~L~vDaN~-- 187 (405)
T 3rr1_A 126 PADVIAGMKALQAGGFDHFKL-NGC---------EEM-GII-----DTSRAVDAAVARVAEIRSAFGNTVEFGLDFHG-- 187 (405)
T ss_dssp HHHHHHHHHHHHHTTCCEEEE-ESC---------CSS-SCB-----CSHHHHHHHHHHHHHHHHTTGGGSEEEEECCS--
T ss_pred HHHHHHHHHHHHHcCCCEEEE-ecC---------Ccc-ccc-----ccchhHHHHHHHHHHHHHHhCCCceEEEECCC--
Confidence 456777888888999999999 443 110 000 11234566789999999999987 68777663
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC
Q 025135 103 DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF 182 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i 182 (257)
. .+.++++++++.|++.| ++||+ +|. .+.....++.+++.+++||++.+.+
T Consensus 188 ~-------~~~~~A~~~~~~L~~~~------i~~iE--eP~--------------~~~d~~~~~~l~~~~~iPIa~dE~i 238 (405)
T 3rr1_A 188 R-------VSAPMAKVLIKELEPYR------PLFIE--EPV--------------LAEQAETYARLAAHTHLPIAAGERM 238 (405)
T ss_dssp C-------BCHHHHHHHHHHHGGGC------CSCEE--CSS--------------CCSSTHHHHHHHTTCSSCEEECTTC
T ss_pred C-------CCHHHHHHHHHHHHhcC------CCEEE--CCC--------------CcccHHHHHHHHhcCCCCEEecCCc
Confidence 2 35788999999999999 88887 542 1112355678999999999999998
Q ss_pred -CHHHHHHHHHcCCCcEEEechHH
Q 025135 183 -TRELGIQALAEDGADLVAYGRLF 205 (257)
Q Consensus 183 -t~~~a~~~l~~g~~D~V~igR~~ 205 (257)
++++++++|+.+.+|+|.+--..
T Consensus 239 ~~~~~~~~~l~~~a~d~v~~d~~~ 262 (405)
T 3rr1_A 239 FSRFDFKRVLEAGGVSILQPDLSH 262 (405)
T ss_dssp CSHHHHHHHHHHCCCSEECCBTTT
T ss_pred CCHHHHHHHHHHhCCCeEEEChhh
Confidence 89999999999999999985433
No 92
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=99.05 E-value=2.1e-09 Score=96.84 Aligned_cols=137 Identities=20% Similarity=0.202 Sum_probs=89.5
Q ss_pred HcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEE-EccCCCCCCCCCCCcHH
Q 025135 36 QAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVR-MSPAIDHLDATDSDPLG 114 (257)
Q Consensus 36 ~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vr-ls~~~~~~~~~~~~~~~ 114 (257)
.+|+|+++||..++ ..+++ .|+.. .+.+.++|++||+ ++ .||.+| ++. +.+.+
T Consensus 143 ~~~~~a~~i~~n~~---~~~~~----------~~~~~--~~~~~~~i~~vr~-~~-~Pv~vK~v~~---------g~~~e 196 (332)
T 1vcf_A 143 MLEADALAFHVNPL---QEAVQ----------RGDTD--FRGLVERLAELLP-LP-FPVMVKEVGH---------GLSRE 196 (332)
T ss_dssp HHTCSEEEEECCHH---HHHHT----------TSCCC--CTTHHHHHHHHCS-CS-SCEEEECSSS---------CCCHH
T ss_pred hcCCCceeeccchH---HHHhc----------CCCcc--HHHHHHHHHHHHc-CC-CCEEEEecCC---------CCCHH
Confidence 35899999987653 22221 11111 2237899999999 74 389999 432 12333
Q ss_pred HHHHHHHHHHhcCCccCCceeEEEeeCCCc---------ccCC-CcCCCCCCCchhHHHHHHHHHHHh-CCcEEEeCCC-
Q 025135 115 LGLAVIQGLNKLQIDQGAKLTYLHVTQPRY---------TAYG-QTESGRPGTEDEEAQLLRTWRRSY-QGTFICSGGF- 182 (257)
Q Consensus 115 ~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~---------~~~~-~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~G~i- 182 (257)
.++.++++| +|+|++++... .... ................+..+++.+ ++|||++|||
T Consensus 197 ----~a~~~~~~G------~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~ 266 (332)
T 1vcf_A 197 ----AALALRDLP------LAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLPHLPLVASGGVY 266 (332)
T ss_dssp ----HHHHHTTSC------CSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHCSSSCEEEESSCC
T ss_pred ----HHHHHHHcC------CCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhcCCCeEEEECCCC
Confidence 367889999 99999864211 1000 000000001122346677888888 7999999999
Q ss_pred CHHHHHHHHHcCCCcEEEechHHhhCc
Q 025135 183 TRELGIQALAEDGADLVAYGRLFISNP 209 (257)
Q Consensus 183 t~~~a~~~l~~g~~D~V~igR~~iadP 209 (257)
+++++.++|..| ||+|++||+++..+
T Consensus 267 ~~~d~~kal~~G-Ad~V~igr~~l~~~ 292 (332)
T 1vcf_A 267 TGTDGAKALALG-ADLLAVARPLLRPA 292 (332)
T ss_dssp SHHHHHHHHHHT-CSEEEECGGGHHHH
T ss_pred CHHHHHHHHHhC-CChHhhhHHHHHHH
Confidence 999999999987 99999999999654
No 93
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=99.04 E-value=5.1e-09 Score=96.13 Aligned_cols=136 Identities=13% Similarity=0.120 Sum_probs=103.8
Q ss_pred HHHHHHHHHHHHc-CCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCC
Q 025135 25 DQYRQAALNAIQA-GFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAI 102 (257)
Q Consensus 25 ~~f~~AA~~a~~a-GfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~ 102 (257)
+++++.|+.+.+. ||..+.|+.|+. + ..--.++|++||+++|++ +|.++.+.
T Consensus 150 ~~~~~~a~~~~~~~G~~~~K~Kvg~~--------------------~----~~~d~~~v~avR~a~g~~~~l~vDan~-- 203 (383)
T 3i4k_A 150 DVAVAEIEERIEEFGNRSFKLKMGAG--------------------D----PAEDTRRVAELAREVGDRVSLRIDINA-- 203 (383)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCSS--------------------C----HHHHHHHHHHHHHTTTTTSEEEEECTT--
T ss_pred HHHHHHHHHHHHhcCCcEEEEeeCCC--------------------C----HHHHHHHHHHHHHHcCCCCEEEEECCC--
Confidence 4555666666676 999999997651 1 234578899999999987 68888763
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC
Q 025135 103 DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF 182 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i 182 (257)
. .+.+++.++++.|++.| ++||+ +|. .+.....++.+++.+++||++.+.+
T Consensus 204 ~-------~~~~~A~~~~~~l~~~~------i~~iE--qP~--------------~~~d~~~~~~l~~~~~iPIa~dE~~ 254 (383)
T 3i4k_A 204 R-------WDRRTALHYLPILAEAG------VELFE--QPT--------------PADDLETLREITRRTNVSVMADESV 254 (383)
T ss_dssp C-------SCHHHHHHHHHHHHHTT------CCEEE--SCS--------------CTTCHHHHHHHHHHHCCEEEESTTC
T ss_pred C-------CCHHHHHHHHHHHHhcC------CCEEE--CCC--------------ChhhHHHHHHHHhhCCCCEEecCcc
Confidence 2 35788999999999999 89997 541 1223456678999999999999998
Q ss_pred -CHHHHHHHHHcCCCcEEEechHHhhCchHHHHH
Q 025135 183 -TRELGIQALAEDGADLVAYGRLFISNPDLVLRF 215 (257)
Q Consensus 183 -t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~ 215 (257)
++++++++++.+.+|+|.+--..+.-..=..|+
T Consensus 255 ~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~i 288 (383)
T 3i4k_A 255 WTPAEALAVVKAQAADVIALKTTKHGGLLESKKI 288 (383)
T ss_dssp SSHHHHHHHHHHTCCSEEEECTTTTTSHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCEEEEcccccCCHHHHHHH
Confidence 899999999999999999976555444434443
No 94
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=99.03 E-value=1.4e-09 Score=101.31 Aligned_cols=149 Identities=13% Similarity=0.037 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHcCCCEEEecccccchhh---------hcCCCCcCCcCC-CCCCchhhHhhHHHHHHHHHHHHhCCC-eE
Q 025135 26 QYRQAALNAIQAGFDGIEIHGAHGYLID---------QFLKDGINDRTD-EYGGSIENRCRFLMQLVREVIVAIGAD-RV 94 (257)
Q Consensus 26 ~f~~AA~~a~~aGfDgVEIh~a~GyLl~---------qFlSp~~N~R~D-~yGGs~enR~r~~~eiv~aiR~~vg~~-~v 94 (257)
+..+.++.+.+.||..|.|+.|..-+-. .-..|....+.+ +-+=+.+...|+..++|++||+++|++ +|
T Consensus 152 ~~~~~~~~~~~~Gf~~iKikvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~v~avR~a~G~d~~L 231 (426)
T 4e4f_A 152 EVLDDYAKHRDQGFKAIRVQCGVPGMETTYGMAKGKGLAYEPATKGSLPEEQLWSTEKYLDFTPKLFEAVRDKFGFNEHL 231 (426)
T ss_dssp HHHHHHHHHHHTTCSEEEECC-------------------CCSEESSSCCEEEECHHHHHHHHHHHHHHHHHHHTTSSEE
T ss_pred HHHHHHHHHHHcCCCEEEEeccCCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHHhCCCCEE
Confidence 3344555667899999999977521100 000111111100 000023456889999999999999987 68
Q ss_pred EEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCC
Q 025135 95 GVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQG 174 (257)
Q Consensus 95 ~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~ 174 (257)
.+..+.. .+.+++.++++.|++.| ++||+ +|.. +.....++.+++.+++
T Consensus 232 ~vDaN~~---------~~~~~A~~~~~~L~~~~------i~~iE--eP~~--------------~~d~~~~~~l~~~~~i 280 (426)
T 4e4f_A 232 LHDMHHR---------LTPIEAARFGKSVEDYR------LFWME--DPTP--------------AENQACFRLIRQHTVT 280 (426)
T ss_dssp EEECTTC---------SCHHHHHHHHHHTGGGC------CSEEE--CCSC--------------CSSGGGGHHHHTTCCS
T ss_pred EEECCCC---------CCHHHHHHHHHHHhhcC------CCEEE--CCCC--------------hHHHHHHHHHHhcCCC
Confidence 8877631 35789999999999999 89987 5421 1122345678999999
Q ss_pred cEEEeCCC-CHHHHHHHHHcCCCcEEEechHH
Q 025135 175 TFICSGGF-TRELGIQALAEDGADLVAYGRLF 205 (257)
Q Consensus 175 pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~ 205 (257)
||++.+.+ ++++++++++.+.+|+|.+--..
T Consensus 281 PIa~dE~~~~~~~~~~~i~~ga~d~v~~k~~~ 312 (426)
T 4e4f_A 281 PIAVGEVFNSIWDCKQLIEEQLIDYIRTTITH 312 (426)
T ss_dssp CEEECTTCCSGGGTHHHHHTTCCSEECCCTTT
T ss_pred CEEeCCCcCCHHHHHHHHHcCCCCEEEeCccc
Confidence 99999998 89999999999999999875443
No 95
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=99.02 E-value=6.5e-09 Score=97.18 Aligned_cols=155 Identities=13% Similarity=0.037 Sum_probs=106.9
Q ss_pred HHHHHHHHHHHHHcCCCEEEeccccc----ch--hhhcCC--------CCcCCcCCCCCC--chhhHhhHHHHHHHHHHH
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHG----YL--IDQFLK--------DGINDRTDEYGG--SIENRCRFLMQLVREVIV 87 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~G----yL--l~qFlS--------p~~N~R~D~yGG--s~enR~r~~~eiv~aiR~ 87 (257)
.+++++.|+.+++.||..+.|..|.. |- -...++ |........=|. +.+...+...++|++||+
T Consensus 156 ~e~~~~~a~~~~~~Gf~~~K~KvG~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR~ 235 (440)
T 3t6c_A 156 EVEVEDSARAKMEEGYQYIRCQMGMYGGAGTDDLRLIANRMVKAKNIQPKRSPRTKAPGIYFDPEAYAKSIPRLFDHLRN 235 (440)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECSSSSTTCCBCCHHHHSSCBCCCSSCCCCCCCSSCCSSEECCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEeeccCCccccccccccccccccccccccccccccccccccccchhhHHHHHHHHHHHHH
Confidence 35667778888899999999987631 00 000000 000000000010 122335678999999999
Q ss_pred HhCCC-eEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHH
Q 025135 88 AIGAD-RVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLR 166 (257)
Q Consensus 88 ~vg~~-~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (257)
++|++ +|.++.+.. .+.++++++++.|++.| +.||+ +|. .+.....++
T Consensus 236 a~G~d~~L~vDaN~~---------~~~~~A~~~~~~L~~~~------i~~iE--eP~--------------~~~d~~~~~ 284 (440)
T 3t6c_A 236 KLGFSVELLHDAHER---------ITPINAIHMAKALEPYQ------LFFLE--DPV--------------APENTEWLK 284 (440)
T ss_dssp HHCSSSEEEEECTTC---------SCHHHHHHHHHHTGGGC------CSEEE--CSS--------------CGGGGGGHH
T ss_pred hcCCCCeEEEECCCC---------CCHHHHHHHHHHhhhcC------CCEEE--CCC--------------ChhhHHHHH
Confidence 99987 788888742 35788999999999999 89997 542 122234567
Q ss_pred HHHHHhCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCc
Q 025135 167 TWRRSYQGTFICSGGF-TRELGIQALAEDGADLVAYGRLFISNP 209 (257)
Q Consensus 167 ~ir~~~~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~iadP 209 (257)
.+++.+++||++.+.+ +++++.++++.+.+|+|.+--..+.=.
T Consensus 285 ~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGi 328 (440)
T 3t6c_A 285 MLRQQSSTPIAMGELFVNVNEWKPLIDNKLIDYIRCHISSIGGI 328 (440)
T ss_dssp HHHHHCCSCEEECTTCCSHHHHHHHHHTTCCSEECCCGGGGTSH
T ss_pred HHHhhcCCCEEeCcccCCHHHHHHHHHcCCccceeechhhhCCH
Confidence 7899999999999998 899999999999999999876555433
No 96
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=99.02 E-value=5e-09 Score=96.55 Aligned_cols=133 Identities=12% Similarity=0.085 Sum_probs=102.0
Q ss_pred HHHHHHHH-HHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccC
Q 025135 24 IDQYRQAA-LNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPA 101 (257)
Q Consensus 24 i~~f~~AA-~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~ 101 (257)
.+++++.| +.+.+.||..++|+.|... .. ...+ .+--.++|++||+++|++ +|.++.+..
T Consensus 140 ~e~~~~~a~~~~~~~G~~~~KlKvG~~~-----------~~---~~~~----~~~d~~~v~avR~a~g~~~~l~vDaN~~ 201 (393)
T 4dwd_A 140 VDEVVREVARRVEAEQPAAVKIRWDGDR-----------TR---CDVD----IPGDIAKARAVRELLGPDAVIGFDANNG 201 (393)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEECCCCT-----------TC---CSCC----HHHHHHHHHHHHHHHCTTCCEEEECTTC
T ss_pred HHHHHHHHHHHHHHcCCCEEEEccCCCC-----------cc---cccC----HHHHHHHHHHHHHHhCCCCeEEEECCCC
Confidence 45666777 7788899999999987621 00 0112 345678999999999987 788887742
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCC
Q 025135 102 IDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGG 181 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~ 181 (257)
.+.+++.++++.|++.| ++||+ +|- .+.....++.+++.+++||++.+.
T Consensus 202 ---------~~~~~A~~~~~~L~~~~------i~~iE--qP~--------------~~~d~~~~~~l~~~~~iPIa~dE~ 250 (393)
T 4dwd_A 202 ---------YSVGGAIRVGRALEDLG------YSWFE--EPV--------------QHYHVGAMGEVAQRLDITVSAGEQ 250 (393)
T ss_dssp ---------CCHHHHHHHHHHHHHTT------CSEEE--CCS--------------CTTCHHHHHHHHHHCSSEEEBCTT
T ss_pred ---------CCHHHHHHHHHHHHhhC------CCEEE--CCC--------------CcccHHHHHHHHhhCCCCEEecCC
Confidence 35788999999999999 89997 541 112345667899999999999999
Q ss_pred C-CHHHHHHHHHcCCCcEEEechHHh
Q 025135 182 F-TRELGIQALAEDGADLVAYGRLFI 206 (257)
Q Consensus 182 i-t~~~a~~~l~~g~~D~V~igR~~i 206 (257)
+ ++++++++|+.+ +|+|.+--..+
T Consensus 251 ~~~~~~~~~~i~~~-~d~v~~k~~~~ 275 (393)
T 4dwd_A 251 TYTLQALKDLILSG-VRMVQPDIVKM 275 (393)
T ss_dssp CCSHHHHHHHHHHT-CCEECCCTTTT
T ss_pred cCCHHHHHHHHHcC-CCEEEeCcccc
Confidence 8 899999999999 99999855443
No 97
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=99.00 E-value=8.3e-09 Score=94.35 Aligned_cols=124 Identities=10% Similarity=0.107 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHHc-CCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccC
Q 025135 24 IDQYRQAALNAIQA-GFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPA 101 (257)
Q Consensus 24 i~~f~~AA~~a~~a-GfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~ 101 (257)
.+++++.|+.+.+. ||..++|+.|+. + ..--.++|++||+++|++ +|.++.+.
T Consensus 152 ~~~~~~~a~~~~~~~G~~~~K~Kvg~~--------------------~----~~~d~~~v~avR~~~g~~~~l~vDan~- 206 (372)
T 3tj4_A 152 LEDLLAGSARAVEEDGFTRLKIKVGHD--------------------D----PNIDIARLTAVRERVDSAVRIAIDGNG- 206 (372)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEECCCS--------------------S----HHHHHHHHHHHHHHSCTTCEEEEECTT-
T ss_pred HHHHHHHHHHHHHccCCCEEEEcCCCC--------------------C----HHHHHHHHHHHHHHcCCCCcEEeeCCC-
Confidence 35566677778888 999999997751 1 223578999999999987 68777763
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCC
Q 025135 102 IDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGG 181 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~ 181 (257)
. .+.+++.++++.|++.+ ++||+ +|. .+.....++.+++.+++||++.+.
T Consensus 207 -~-------~~~~~a~~~~~~l~~~~------i~~iE--qP~--------------~~~d~~~~~~l~~~~~iPIa~dE~ 256 (372)
T 3tj4_A 207 -K-------WDLPTCQRFCAAAKDLD------IYWFE--EPL--------------WYDDVTSHARLARNTSIPIALGEQ 256 (372)
T ss_dssp -C-------CCHHHHHHHHHHTTTSC------EEEEE--SCS--------------CTTCHHHHHHHHHHCSSCEEECTT
T ss_pred -C-------CCHHHHHHHHHHHhhcC------CCEEE--CCC--------------CchhHHHHHHHHhhcCCCEEeCCC
Confidence 1 35788999999999999 89997 541 122345667899999999999999
Q ss_pred C-CHHHHHHHHHcCCCcEEEec
Q 025135 182 F-TRELGIQALAEDGADLVAYG 202 (257)
Q Consensus 182 i-t~~~a~~~l~~g~~D~V~ig 202 (257)
+ +++++.++++.+.+|+|.+-
T Consensus 257 ~~~~~~~~~~i~~~~~d~v~~k 278 (372)
T 3tj4_A 257 LYTVDAFRSFIDAGAVAYVQPD 278 (372)
T ss_dssp CCSHHHHHHHHHTTCCSEECCC
T ss_pred ccCHHHHHHHHHcCCCCEEEeC
Confidence 8 89999999999999999873
No 98
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=98.98 E-value=7e-09 Score=94.72 Aligned_cols=129 Identities=10% Similarity=0.081 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCC
Q 025135 25 DQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAID 103 (257)
Q Consensus 25 ~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~ 103 (257)
+++++.|+.+.+.||..++|+.|. + ..--.++|++||+++|++ +|.++.+. .
T Consensus 142 e~~~~~a~~~~~~G~~~~K~KvG~---------------------~----~~~d~~~v~avR~~~g~~~~l~vDaN~--~ 194 (368)
T 3q45_A 142 HKMAADAVQIKKNGFEIIKVKVGG---------------------S----KELDVERIRMIREAAGDSITLRIDANQ--G 194 (368)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCS---------------------C----HHHHHHHHHHHHHHHCSSSEEEEECTT--C
T ss_pred HHHHHHHHHHHHcCCCeEEEEecC---------------------C----HHHHHHHHHHHHHHhCCCCeEEEECCC--C
Confidence 556777778889999999998764 1 134568899999999987 67777653 2
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-
Q 025135 104 HLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF- 182 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i- 182 (257)
.+.+++.++++.|++.+ ++||+ +|. .+.....++.+++.+++||++.+.+
T Consensus 195 -------~~~~~A~~~~~~l~~~~------i~~iE--qP~--------------~~~~~~~~~~l~~~~~iPIa~dE~~~ 245 (368)
T 3q45_A 195 -------WSVETAIETLTLLEPYN------IQHCE--EPV--------------SRNLYTALPKIRQACRIPIMADESCC 245 (368)
T ss_dssp -------BCHHHHHHHHHHHGGGC------CSCEE--CCB--------------CGGGGGGHHHHHHTCSSCEEESTTCC
T ss_pred -------CChHHHHHHHHHHhhcC------CCEEE--CCC--------------ChhHHHHHHHHHhhCCCCEEEcCCcC
Confidence 35788999999999999 88887 541 1222345677899999999999998
Q ss_pred CHHHHHHHHHcCCCcEEEechHHhhCc
Q 025135 183 TRELGIQALAEDGADLVAYGRLFISNP 209 (257)
Q Consensus 183 t~~~a~~~l~~g~~D~V~igR~~iadP 209 (257)
++++++++++.+.+|+|.+--..+.-.
T Consensus 246 ~~~~~~~~~~~~~~d~v~~k~~~~GGi 272 (368)
T 3q45_A 246 NSFDAERLIQIQACDSFNLKLSKSAGI 272 (368)
T ss_dssp SHHHHHHHHHTTCCSEEEECTTTTTSH
T ss_pred CHHHHHHHHHcCCCCeEEechhhcCCH
Confidence 899999999999999998865554333
No 99
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=98.97 E-value=9.7e-09 Score=94.32 Aligned_cols=125 Identities=15% Similarity=0.176 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHHHc-CCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccC
Q 025135 24 IDQYRQAALNAIQA-GFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPA 101 (257)
Q Consensus 24 i~~f~~AA~~a~~a-GfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~ 101 (257)
.+++++.|+.+.+. ||..++|+.|.. + ..--.++|++||+++|++ .|.+..+.
T Consensus 168 ~e~~~~~a~~~~~~~G~~~~KlKvG~~--------------------~----~~~d~~~v~avR~a~G~~~~l~vDaN~- 222 (383)
T 3toy_A 168 ARDDERTLRTACDEHGFRAIKSKGGHG--------------------D----LATDEAMIKGLRALLGPDIALMLDFNQ- 222 (383)
T ss_dssp HHHHHHHHHHHHHTSCCCEEEEECCSS--------------------C----HHHHHHHHHHHHHHHCTTSEEEEECTT-
T ss_pred HHHHHHHHHHHHHccCCcEEEEecCCC--------------------C----HHHHHHHHHHHHHHhCCCCeEEEeCCC-
Confidence 45667777888888 999999987651 1 234568899999999987 67777763
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCC
Q 025135 102 IDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGG 181 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~ 181 (257)
. .+.+++.++++.|++.| +.||+ +|. .+.....++.+++.+++||++.+.
T Consensus 223 -~-------~~~~~A~~~~~~l~~~~------i~~iE--eP~--------------~~~d~~~~~~l~~~~~iPIa~dE~ 272 (383)
T 3toy_A 223 -S-------LDPAEATRRIARLADYD------LTWIE--EPV--------------PQENLSGHAAVRERSEIPIQAGEN 272 (383)
T ss_dssp -C-------SCHHHHHHHHHHHGGGC------CSEEE--CCS--------------CTTCHHHHHHHHHHCSSCEEECTT
T ss_pred -C-------CCHHHHHHHHHHHHhhC------CCEEE--CCC--------------CcchHHHHHHHHhhcCCCEEeCCC
Confidence 2 35788999999999999 89987 541 122345667899999999999999
Q ss_pred C-CHHHHHHHHHcCCCcEEEech
Q 025135 182 F-TRELGIQALAEDGADLVAYGR 203 (257)
Q Consensus 182 i-t~~~a~~~l~~g~~D~V~igR 203 (257)
+ +++++.++++.+.+|+|.+--
T Consensus 273 ~~~~~~~~~~i~~~a~d~v~ik~ 295 (383)
T 3toy_A 273 WWFPRGFAEAIAAGASDFIMPDL 295 (383)
T ss_dssp CCHHHHHHHHHHHTCCSEECCCT
T ss_pred cCCHHHHHHHHHcCCCCEEEeCc
Confidence 8 799999999999999998753
No 100
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.96 E-value=2.1e-10 Score=99.02 Aligned_cols=88 Identities=19% Similarity=0.173 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHHHc
Q 025135 115 LGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQALAE 193 (257)
Q Consensus 115 ~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~~ 193 (257)
...++++.+++.| ++++.++....... ........++.+++.+++|||++||+ +++++.++++.
T Consensus 157 ~~~~~a~~~~~~G------~~~i~~t~~~~~g~---------~~g~~~~~~~~i~~~~~iPvia~GGI~~~~d~~~~~~~ 221 (247)
T 3tdn_A 157 LLRDWVVEVEKRG------AGEILLTSIDRDGT---------KSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLR 221 (247)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CHHHHHHHHHhcC------CCEEEEecccCCCC---------cCCCCHHHHHHHHHhCCCCEEEECCCCCHHHHHHHHHc
Confidence 4567889999999 88887765321111 01123456778888899999999999 79999999999
Q ss_pred CCCcEEEechHHhhCchHHHHHHcC
Q 025135 194 DGADLVAYGRLFISNPDLVLRFKLN 218 (257)
Q Consensus 194 g~~D~V~igR~~iadP~l~~k~~~g 218 (257)
| ||+|++||+++.+|++++++++.
T Consensus 222 G-ad~v~vg~al~~~p~~~~~~~~~ 245 (247)
T 3tdn_A 222 G-ADKVSINTAAVENPSLITQIAQT 245 (247)
T ss_dssp -------------------------
T ss_pred C-CcHhhccHHHHcCcHHHHHHHHh
Confidence 7 99999999999999999998753
No 101
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=98.96 E-value=2e-08 Score=84.93 Aligned_cols=137 Identities=16% Similarity=0.195 Sum_probs=93.3
Q ss_pred HHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCCC
Q 025135 30 AALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDATD 109 (257)
Q Consensus 30 AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~ 109 (257)
.+..+.++|+|.|.||...- .+.+ ..+.++++.+|+.++..++++.+.
T Consensus 80 ~i~~~~~~Gad~v~l~~~~~------------~~p~----------~~~~~~i~~~~~~~~~~~v~~~~~---------- 127 (223)
T 1y0e_A 80 EVDELIESQCEVIALDATLQ------------QRPK----------ETLDELVSYIRTHAPNVEIMADIA---------- 127 (223)
T ss_dssp HHHHHHHHTCSEEEEECSCS------------CCSS----------SCHHHHHHHHHHHCTTSEEEEECS----------
T ss_pred HHHHHHhCCCCEEEEeeecc------------cCcc----------cCHHHHHHHHHHhCCCceEEecCC----------
Confidence 34456789999999987540 0110 125689999999885336665442
Q ss_pred CCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHH
Q 025135 110 SDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGI 188 (257)
Q Consensus 110 ~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~ 188 (257)
+.++ ++.+++.| +++|.+..+.+..... + ..........++++++.+++||++.||+ +++++.
T Consensus 128 --t~~e----~~~~~~~G------~d~i~~~~~g~t~~~~---~-~~~~~~~~~~~~~~~~~~~ipvia~GGI~~~~~~~ 191 (223)
T 1y0e_A 128 --TVEE----AKNAARLG------FDYIGTTLHGYTSYTQ---G-QLLYQNDFQFLKDVLQSVDAKVIAEGNVITPDMYK 191 (223)
T ss_dssp --SHHH----HHHHHHTT------CSEEECTTTTSSTTST---T-CCTTHHHHHHHHHHHHHCCSEEEEESSCCSHHHHH
T ss_pred --CHHH----HHHHHHcC------CCEEEeCCCcCcCCCC---C-CCCCcccHHHHHHHHhhCCCCEEEecCCCCHHHHH
Confidence 2333 34578889 8998765443322110 0 0012334567788888889999999999 999999
Q ss_pred HHHHcCCCcEEEechHHhhCchHHHHHH
Q 025135 189 QALAEDGADLVAYGRLFISNPDLVLRFK 216 (257)
Q Consensus 189 ~~l~~g~~D~V~igR~~iadP~l~~k~~ 216 (257)
++++.| +|+|++||+++. |+++.+..
T Consensus 192 ~~~~~G-ad~v~vG~al~~-p~~~~~~~ 217 (223)
T 1y0e_A 192 RVMDLG-VHCSVVGGAITR-PKEITKRF 217 (223)
T ss_dssp HHHHTT-CSEEEECHHHHC-HHHHHHHH
T ss_pred HHHHcC-CCEEEEChHHcC-cHHHHHHH
Confidence 999998 999999999665 88776543
No 102
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=98.95 E-value=1.3e-08 Score=93.58 Aligned_cols=128 Identities=16% Similarity=0.204 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHHc---CCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEc
Q 025135 24 IDQYRQAALNAIQA---GFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMS 99 (257)
Q Consensus 24 i~~f~~AA~~a~~a---GfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls 99 (257)
.+++++.|+.+.+. ||..++|+.|.. + ..--.++|++||+++|++ +|.++.+
T Consensus 172 ~e~~~~~a~~~~~~~~~G~~~iKlKvG~~--------------------~----~~~d~~~v~avR~a~G~~~~l~vDaN 227 (390)
T 3ugv_A 172 AEVAAEAVELKAEGQGTGFKGLKLRMGRD--------------------D----PAVDIETAEAVWDAVGRDTALMVDFN 227 (390)
T ss_dssp HHHHHHHHHHHHTTCTTCCSEEEEECCCS--------------------S----HHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred HHHHHHHHHHHHHhhhCCCcEEEEecCCC--------------------C----HHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 45667777888888 999999987641 1 234568899999999987 6887776
Q ss_pred cCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEe
Q 025135 100 PAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICS 179 (257)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~ 179 (257)
. . .+.+++.++++.|++.| +.||+ +|. .+.....++.+++.+++||++.
T Consensus 228 ~--~-------~~~~~A~~~~~~l~~~~------i~~iE--qP~--------------~~~d~~~~~~l~~~~~iPIa~d 276 (390)
T 3ugv_A 228 Q--G-------LDMAEAMHRTRQIDDLG------LEWIE--EPV--------------VYDNFDGYAQLRHDLKTPLMIG 276 (390)
T ss_dssp T--C-------CCHHHHHHHHHHHTTSC------CSEEE--CCS--------------CTTCHHHHHHHHHHCSSCEEEC
T ss_pred C--C-------CCHHHHHHHHHHHHhhC------CCEEE--CCC--------------CcccHHHHHHHHHhcCCCEEeC
Confidence 3 2 35788999999999999 89987 541 1223456678999999999999
Q ss_pred CCC-CHHHHHHHHHcCCCcEEEechHHh
Q 025135 180 GGF-TRELGIQALAEDGADLVAYGRLFI 206 (257)
Q Consensus 180 G~i-t~~~a~~~l~~g~~D~V~igR~~i 206 (257)
+.+ +++++.++++.+.+|+|.+--..+
T Consensus 277 E~~~~~~~~~~~i~~~a~d~v~ik~~~~ 304 (390)
T 3ugv_A 277 ENFYGPREMHQALQAGACDLVMPDFMRI 304 (390)
T ss_dssp TTCCSHHHHHHHHHTTCCSEECCBHHHH
T ss_pred CCcCCHHHHHHHHHcCCCCEEEeCcccc
Confidence 998 899999999999999998764443
No 103
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=98.95 E-value=1.2e-08 Score=93.23 Aligned_cols=133 Identities=13% Similarity=0.089 Sum_probs=91.9
Q ss_pred HHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCC
Q 025135 27 YRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLD 106 (257)
Q Consensus 27 f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~ 106 (257)
+.+.+..+.++|.|.|.+|+++ |. .++++.+|+. |. +|++++.
T Consensus 111 ~~~~~~~~~~~g~~~V~~~~g~---------~~-------------------~~~i~~~~~~-g~-~v~~~v~------- 153 (369)
T 3bw2_A 111 YDAKLAVLLDDPVPVVSFHFGV---------PD-------------------REVIARLRRA-GT-LTLVTAT------- 153 (369)
T ss_dssp HHHHHHHHHHSCCSEEEEESSC---------CC-------------------HHHHHHHHHT-TC-EEEEEES-------
T ss_pred HHHHHHHHHhcCCCEEEEeCCC---------Cc-------------------HHHHHHHHHC-CC-eEEEECC-------
Confidence 3455667788999999999876 31 3566777763 32 6777764
Q ss_pred CCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccC-CCcCCCC-CCC-chhHHHHHHHHHHHhCCcEEEeCCC-
Q 025135 107 ATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAY-GQTESGR-PGT-EDEEAQLLRTWRRSYQGTFICSGGF- 182 (257)
Q Consensus 107 ~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~-~~~~~~~-~~~-~~~~~~~~~~ir~~~~~pvi~~G~i- 182 (257)
+.+ .++.+++.| +|+|.++.+.+... +...... ... ....+..+..+++.+++|||+.|||
T Consensus 154 -----t~~----~a~~a~~~G------aD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~~iPViaaGGI~ 218 (369)
T 3bw2_A 154 -----TPE----EARAVEAAG------ADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAVDIPVVAAGGIM 218 (369)
T ss_dssp -----SHH----HHHHHHHTT------CSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHCSSCEEEESSCC
T ss_pred -----CHH----HHHHHHHcC------CCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhcCceEEEECCCC
Confidence 233 356778899 89998865432111 0000000 000 0123567788888889999999999
Q ss_pred CHHHHHHHHHcCCCcEEEechHHhhCchHH
Q 025135 183 TRELGIQALAEDGADLVAYGRLFISNPDLV 212 (257)
Q Consensus 183 t~~~a~~~l~~g~~D~V~igR~~iadP~l~ 212 (257)
+++++.++|+.| +|+|++||+++++|+++
T Consensus 219 ~~~~~~~~l~~G-Ad~V~vGs~~~~~~e~~ 247 (369)
T 3bw2_A 219 RGGQIAAVLAAG-ADAAQLGTAFLATDESG 247 (369)
T ss_dssp SHHHHHHHHHTT-CSEEEESHHHHTSTTCC
T ss_pred CHHHHHHHHHcC-CCEEEEChHHhCCcccC
Confidence 999999999988 99999999999999874
No 104
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=98.94 E-value=9.4e-09 Score=93.80 Aligned_cols=124 Identities=11% Similarity=0.085 Sum_probs=97.0
Q ss_pred HHHHHHHHHHHHHc-CCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccC
Q 025135 24 IDQYRQAALNAIQA-GFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPA 101 (257)
Q Consensus 24 i~~f~~AA~~a~~a-GfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~ 101 (257)
.+++++.|+.+.+. ||..++|+.|.. | + +--.++|++||+++|++ +|.+..+.
T Consensus 140 ~~~~~~~a~~~~~~~G~~~~K~K~g~~--------~-------------~---~~d~~~v~avR~a~g~~~~l~vDan~- 194 (367)
T 3dg3_A 140 PVKMVAEAERIRETYGINTFKVKVGRR--------P-------------V---QLDTAVVRALRERFGDAIELYVDGNR- 194 (367)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEECCCS--------S-------------T---HHHHHHHHHHHHHHGGGSEEEEECTT-
T ss_pred HHHHHHHHHHHHHhcCccEEEEeeCCC--------h-------------h---hhHHHHHHHHHHHhCCCCEEEEECCC-
Confidence 35667777788888 999999987641 1 1 13468899999999987 67776653
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCC
Q 025135 102 IDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGG 181 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~ 181 (257)
. .+.+++.++++.|++.| ++||+ +|. .+.....++.+++.+++||++.+.
T Consensus 195 -~-------~~~~~a~~~~~~l~~~~------i~~iE--qP~--------------~~~d~~~~~~l~~~~~iPIa~dE~ 244 (367)
T 3dg3_A 195 -G-------WSAAESLRAMREMADLD------LLFAE--ELC--------------PADDVLSRRRLVGQLDMPFIADES 244 (367)
T ss_dssp -C-------SCHHHHHHHHHHTTTSC------CSCEE--SCS--------------CTTSHHHHHHHHHHCSSCEEECTT
T ss_pred -C-------CCHHHHHHHHHHHHHhC------CCEEE--CCC--------------CcccHHHHHHHHHhCCCCEEecCC
Confidence 2 35788999999999999 88887 541 112345667899999999999999
Q ss_pred C-CHHHHHHHHHcCCCcEEEec
Q 025135 182 F-TRELGIQALAEDGADLVAYG 202 (257)
Q Consensus 182 i-t~~~a~~~l~~g~~D~V~ig 202 (257)
+ ++++++++++.+.+|+|.+=
T Consensus 245 ~~~~~~~~~~i~~~~~d~v~~k 266 (367)
T 3dg3_A 245 VPTPADVTREVLGGSATAISIK 266 (367)
T ss_dssp CSSHHHHHHHHHHTSCSEEEEC
T ss_pred cCCHHHHHHHHHcCCCCEEEee
Confidence 8 89999999999999999883
No 105
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=98.93 E-value=2e-08 Score=92.40 Aligned_cols=134 Identities=14% Similarity=0.148 Sum_probs=104.7
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEE-EEEccC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVG-VRMSPA 101 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~-vrls~~ 101 (257)
.+++++.|+.+.+.||+.|+|+.|+ + .+--.++|++||+++|++ .|. +..+.
T Consensus 143 ~e~~~~~a~~~~~~G~~~~KiKvG~---------------------~----~~~d~~~v~avR~a~g~~~~l~~vDan~- 196 (391)
T 3gd6_A 143 VESNLDVVRQKLEQGFDVFRLYVGK---------------------N----LDADEEFLSRVKEEFGSRVRIKSYDFSH- 196 (391)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECSS---------------------C----HHHHHHHHHHHHHHHGGGCEEEEEECTT-
T ss_pred HHHHHHHHHHHHHcCCCEEEEeeCC---------------------C----HHHHHHHHHHHHHHcCCCCcEEEecCCC-
Confidence 4677888888899999999999875 1 234578999999999987 577 76653
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHhcCCccCCce--eEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEe
Q 025135 102 IDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKL--TYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICS 179 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~v--d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~ 179 (257)
. .+.+++.++++.|++.| + .||+ +|. .+.....++.+++.+++|| .
T Consensus 197 -~-------~~~~~A~~~~~~l~~~~------i~~~~iE--qP~--------------~~~d~~~~~~l~~~~~iPI--d 244 (391)
T 3gd6_A 197 -L-------LNWKDAHRAIKRLTKYD------LGLEMIE--SPA--------------PRNDFDGLYQLRLKTDYPI--S 244 (391)
T ss_dssp -C-------SCHHHHHHHHHHHTTCC------SSCCEEE--CCS--------------CTTCHHHHHHHHHHCSSCE--E
T ss_pred -C-------cCHHHHHHHHHHHHhcC------CCcceec--CCC--------------ChhhHHHHHHHHHHcCCCc--C
Confidence 2 35788999999999999 7 8887 541 1123456778999999999 6
Q ss_pred CCC-CHHHHHHHHHcCCCcEEEechHHhhCchHHHHH
Q 025135 180 GGF-TRELGIQALAEDGADLVAYGRLFISNPDLVLRF 215 (257)
Q Consensus 180 G~i-t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~ 215 (257)
+.+ ++++++++++.+.+|+|.+--..+.-..=..|+
T Consensus 245 E~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i 281 (391)
T 3gd6_A 245 EHVWSFKQQQEMIKKDAIDIFNISPVFIGGLTSAKKA 281 (391)
T ss_dssp EECCCHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred CCCCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHH
Confidence 667 899999999999999999988877666444444
No 106
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=98.93 E-value=7.8e-09 Score=93.97 Aligned_cols=130 Identities=10% Similarity=0.089 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAI 102 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~ 102 (257)
.+++++.|+.+.+.||..++|+.|+ + .+--.+++++||+++|++ +|.+..+.
T Consensus 141 ~~~~~~~a~~~~~~G~~~~K~K~G~---------------------~----~~~d~~~v~avR~~~g~~~~l~vDan~-- 193 (356)
T 3ro6_B 141 VEETLAEAREHLALGFRVLKVKLCG---------------------D----EEQDFERLRRLHETLAGRAVVRVDPNQ-- 193 (356)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCS---------------------C----HHHHHHHHHHHHHHHTTSSEEEEECTT--
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeCC---------------------C----HHHHHHHHHHHHHHhCCCCEEEEeCCC--
Confidence 3566777888888999999999764 1 234678899999999987 67777663
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC
Q 025135 103 DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF 182 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i 182 (257)
. .+.+++.++++.|++.+ ++||+ +|. .+.....++.+++.+++||++.+.+
T Consensus 194 ~-------~~~~~a~~~~~~l~~~~------i~~iE--qP~--------------~~~d~~~~~~l~~~~~iPIa~dE~~ 244 (356)
T 3ro6_B 194 S-------YDRDGLLRLDRLVQELG------IEFIE--QPF--------------PAGRTDWLRALPKAIRRRIAADESL 244 (356)
T ss_dssp C-------CCHHHHHHHHHHHHHTT------CCCEE--CCS--------------CTTCHHHHHTSCHHHHHTEEESTTC
T ss_pred C-------CCHHHHHHHHHHHHhcC------CCEEE--CCC--------------CCCcHHHHHHHHhcCCCCEEeCCcC
Confidence 2 35788999999999999 88887 541 1123455677888889999999998
Q ss_pred -CHHHHHHHHHcC-CCcEEEechHHhhCc
Q 025135 183 -TRELGIQALAED-GADLVAYGRLFISNP 209 (257)
Q Consensus 183 -t~~~a~~~l~~g-~~D~V~igR~~iadP 209 (257)
+++++.++++.+ .+|+|.+--..+.-.
T Consensus 245 ~~~~~~~~~~~~~~~~d~v~~k~~~~GGi 273 (356)
T 3ro6_B 245 LGPADAFALAAPPAACGIFNIKLMKCGGL 273 (356)
T ss_dssp CSHHHHHHHHSSSCSCSEEEECHHHHCSH
T ss_pred CCHHHHHHHHhcCCcCCEEEEcccccCCH
Confidence 899999999999 999999876655433
No 107
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=98.91 E-value=1.8e-08 Score=93.58 Aligned_cols=145 Identities=10% Similarity=0.056 Sum_probs=106.8
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccc-cchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAH-GYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPA 101 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~-GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~ 101 (257)
.+++++.|+++.+.||..+.++.|. ++-..++..+....+ ..+ ....+..+...+.|++||+++|++ .|.+..+..
T Consensus 154 ~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~d~~~v~avR~a~G~~~~l~vDan~~ 231 (421)
T 4hnl_A 154 LDDLYHEIDRFLAAGYRYIRCQLGFYGGNPSQLQTPEEPIS-GSY-FDQTDYMETTLKMFAAIKEKYGNQFQMLHDVHER 231 (421)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEESCCCCCGGGSCCCSSCCS-SEE-CCHHHHHHHHHHHHHHHHHHHTTSSEEEEECTTC
T ss_pred HHHHHHHHHHHHHhhHHHHhhccccccCCchhccccccccc-ccc-ccchhHHHHHHHHHHHHHHHhCCCceEecccccc
Confidence 3566778888899999999998775 444444443322111 011 123455778889999999999987 577766632
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCC
Q 025135 102 IDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGG 181 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~ 181 (257)
.+.++++++++.|++.+ +.|++ +|- .+.....++++++.+++||++...
T Consensus 232 ---------~~~~~A~~~~~~l~~~~------i~~iE--eP~--------------~~~d~~~~~~l~~~~~ipIa~dE~ 280 (421)
T 4hnl_A 232 ---------LHPNQAIQFAKAAEPYQ------LFFLE--DIL--------------PPDQSHWLTQLRSQSATPIATGEL 280 (421)
T ss_dssp ---------SCHHHHHHHHHHHGGGC------CSEEE--CCS--------------CGGGGGGHHHHHTTCCCCEEECTT
T ss_pred ---------CCHHHHHHHHHHhhhhh------hcccc--cCC--------------cccchHHHHHHHhcCCCCeecCcc
Confidence 35788999999999999 88887 541 223345567799999999999888
Q ss_pred C-CHHHHHHHHHcCCCcEEEe
Q 025135 182 F-TRELGIQALAEDGADLVAY 201 (257)
Q Consensus 182 i-t~~~a~~~l~~g~~D~V~i 201 (257)
+ +++++.++|+.+.+|+|.+
T Consensus 281 ~~~~~~~~~~i~~~a~d~v~~ 301 (421)
T 4hnl_A 281 FNNPMEWQELVKNRQIDFMRA 301 (421)
T ss_dssp CCSGGGTHHHHHTTCCSEECC
T ss_pred eehhHHHHHHHhcCCceEEEe
Confidence 8 8999999999999999986
No 108
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=98.91 E-value=1.8e-08 Score=90.99 Aligned_cols=133 Identities=16% Similarity=0.102 Sum_probs=90.2
Q ss_pred HHHHHHHHcC--CCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCC
Q 025135 29 QAALNAIQAG--FDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLD 106 (257)
Q Consensus 29 ~AA~~a~~aG--fDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~ 106 (257)
+.|+.+.++| +|.|+||.++| ......++|+++|++++..+|. +=+.
T Consensus 109 ~~a~~~~~~g~~~~~i~i~~~~G------------------------~~~~~~~~i~~lr~~~~~~~vi-~G~v------ 157 (336)
T 1ypf_A 109 EFVQQLAAEHLTPEYITIDIAHG------------------------HSNAVINMIQHIKKHLPESFVI-AGNV------ 157 (336)
T ss_dssp HHHHHHHHTTCCCSEEEEECSSC------------------------CSHHHHHHHHHHHHHCTTSEEE-EEEE------
T ss_pred HHHHHHHhcCCCCCEEEEECCCC------------------------CcHHHHHHHHHHHHhCCCCEEE-ECCc------
Confidence 4467778899 99999987642 1346789999999998643443 2111
Q ss_pred CCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHH
Q 025135 107 ATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRE 185 (257)
Q Consensus 107 ~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~ 185 (257)
.+. +.++.++++| +|+|.++...-...............+....+.++++.+++|||++||+ +..
T Consensus 158 ----~s~----e~A~~a~~aG------ad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~~ipVIa~GGI~~g~ 223 (336)
T 1ypf_A 158 ----GTP----EAVRELENAG------ADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAASKPIIADGGIRTNG 223 (336)
T ss_dssp ----CSH----HHHHHHHHHT------CSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTCSSCEEEESCCCSTH
T ss_pred ----CCH----HHHHHHHHcC------CCEEEEecCCCceeecccccCcCCchhHHHHHHHHHHHcCCcEEEeCCCCCHH
Confidence 123 4678889999 8999884311000000000000011113567778888889999999999 899
Q ss_pred HHHHHHHcCCCcEEEechHHhh
Q 025135 186 LGIQALAEDGADLVAYGRLFIS 207 (257)
Q Consensus 186 ~a~~~l~~g~~D~V~igR~~ia 207 (257)
++.++|.-| ||+|++||+++.
T Consensus 224 Dv~kalalG-AdaV~iGr~~l~ 244 (336)
T 1ypf_A 224 DVAKSIRFG-ATMVMIGSLFAG 244 (336)
T ss_dssp HHHHHHHTT-CSEEEESGGGTT
T ss_pred HHHHHHHcC-CCEEEeChhhhc
Confidence 999999987 999999999994
No 109
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=98.91 E-value=3e-08 Score=91.79 Aligned_cols=134 Identities=11% Similarity=0.113 Sum_probs=98.6
Q ss_pred HHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCch-hhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCCCC
Q 025135 28 RQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSI-ENRCRFLMQLVREVIVAIGAD-RVGVRMSPAIDHL 105 (257)
Q Consensus 28 ~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~-enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~~~ 105 (257)
.+.|+.+.+.||..+.|+--. +. ..+-|+.+ ....+...|+|++||+++|++ +|.++.+. .
T Consensus 161 ~~~a~~~~~~G~~~~K~~~~~-~~------------~~K~G~~~~~~~~~~d~e~v~avR~a~g~d~~l~vDaN~--~-- 223 (410)
T 3dip_A 161 GVLAESLVAEGYAAMKIWPFD-DF------------ASITPHHISLTDLKDGLEPFRKIRAAVGQRIEIMCELHS--L-- 223 (410)
T ss_dssp HHHHHHHHHTTCSEEEECTTH-HH------------HTTCTTCCCHHHHHHHHHHHHHHHHHHTTSSEEEEECTT--C--
T ss_pred HHHHHHHHHcCCCEEEECCcc-Cc------------cccccCcCCHHHHHHHHHHHHHHHHHcCCCceEEEECCC--C--
Confidence 445567778999999996211 00 01112211 223667899999999999987 68888773 2
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCC-CcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-C
Q 025135 106 DATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQP-RYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-T 183 (257)
Q Consensus 106 ~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t 183 (257)
.+.++++++++.|++.+ ++||+ +| .. +.....++.+++.+++||++.+.+ +
T Consensus 224 -----~~~~~A~~~~~~L~~~~------i~~iE--qP~~~--------------~~~~~~~~~l~~~~~iPIa~dE~~~~ 276 (410)
T 3dip_A 224 -----WGTHAAARICNALADYG------VLWVE--DPIAK--------------MDNIPAVADLRRQTRAPICGGENLAG 276 (410)
T ss_dssp -----BCHHHHHHHHHHGGGGT------CSEEE--CCBSC--------------TTCHHHHHHHHHHHCCCEEECTTCCS
T ss_pred -----CCHHHHHHHHHHHHhcC------CCEEE--CCCCC--------------cccHHHHHHHHhhCCCCEEecCCcCC
Confidence 35789999999999999 89998 43 11 112456678999999999999998 8
Q ss_pred HHHHHHHHHcCCCcEEEechHH
Q 025135 184 RELGIQALAEDGADLVAYGRLF 205 (257)
Q Consensus 184 ~~~a~~~l~~g~~D~V~igR~~ 205 (257)
+++++++|+.+.+|+|.+--..
T Consensus 277 ~~~~~~~l~~~~~d~v~~k~~~ 298 (410)
T 3dip_A 277 TRRFHEMLCADAIDFVMLDLTW 298 (410)
T ss_dssp HHHHHHHHHTTCCSEEEECTTT
T ss_pred HHHHHHHHHcCCCCeEeecccc
Confidence 9999999999999999984333
No 110
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=98.90 E-value=3.1e-08 Score=91.13 Aligned_cols=136 Identities=11% Similarity=0.044 Sum_probs=98.6
Q ss_pred HHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCCCCCCCCC
Q 025135 32 LNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAIDHLDATDS 110 (257)
Q Consensus 32 ~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~~~~~~~~ 110 (257)
+...+.||..+.|+.|.. .. .-.+++ .+-..++|++||+++|++ .|.+..+..
T Consensus 156 ~~~~~~Gf~~~K~KvG~~---------~~-~d~~~~-------~~~~~~~v~avReavG~d~~l~vDaN~~--------- 209 (388)
T 3tcs_A 156 RLRDTQGFTAFKVRAGAE---------VG-RNRDEW-------PGRTEEIIPTMRRELGDDVDLLIDANSC--------- 209 (388)
T ss_dssp HHHHHHCCCEEEEECSCT---------TC-TTCCSS-------TTHHHHHHHHHHHHHCSSSEEEEECTTC---------
T ss_pred HHHHhcCCCEEEEccCCC---------cc-cccccc-------hhHHHHHHHHHHHHhCCCCeEEEeCCCC---------
Confidence 334578999999998751 10 001111 233668899999999987 688777642
Q ss_pred CcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHH
Q 025135 111 DPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQ 189 (257)
Q Consensus 111 ~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~ 189 (257)
.+.++++++++.|++.+ +.|++ +|. .+.....++.+++.+++||++.+.+ +++++.+
T Consensus 210 ~~~~~A~~~~~~l~~~~------i~~iE--eP~--------------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~ 267 (388)
T 3tcs_A 210 YTPDRAIEVGHMLQDHG------FCHFE--EPC--------------PYWELAQTKQVTDALDIDVTGGEQDCDLPTWQR 267 (388)
T ss_dssp CCHHHHHHHHHHHHHTT------CCEEE--CCS--------------CTTCHHHHHHHHHHCSSCEEECTTCCCHHHHHH
T ss_pred cCHHHHHHHHHHHhhcC------CeEEE--CCC--------------CccCHHHHHHHHHhcCCCEEcCCccCCHHHHHH
Confidence 35788999999999999 88887 541 1223456678999999999999888 8999999
Q ss_pred HHHcCCCcEEEechHHhhCchHHHHH
Q 025135 190 ALAEDGADLVAYGRLFISNPDLVLRF 215 (257)
Q Consensus 190 ~l~~g~~D~V~igR~~iadP~l~~k~ 215 (257)
+++.+.+|+|.+--..+.-..=..|+
T Consensus 268 ~i~~~a~d~v~~d~~~~GGit~a~ki 293 (388)
T 3tcs_A 268 MIDMRAVDIVQPDILYLGGICRTLRV 293 (388)
T ss_dssp HHHHTCCSEECCCHHHHTSHHHHHHH
T ss_pred HHHcCCCCEEEeCccccCCHHHHHHH
Confidence 99999999998865555443333333
No 111
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=98.90 E-value=5.2e-08 Score=88.80 Aligned_cols=152 Identities=16% Similarity=0.120 Sum_probs=103.4
Q ss_pred CCCChhhHHHHHHHHH----------------HHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhh
Q 025135 13 QALQTSEIPEVIDQYR----------------QAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCR 76 (257)
Q Consensus 13 ~~lt~~eI~~ii~~f~----------------~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r 76 (257)
+.|+.+++.+.++... +.++.+.++|+|.|.|+.+||. .+
T Consensus 76 ~~~s~e~~~~~I~~vk~~~~~pvga~ig~~~~e~a~~l~eaGad~I~ld~a~G~------------------------~~ 131 (361)
T 3khj_A 76 KNMDMESQVNEVLKVKNSGGLRVGAAIGVNEIERAKLLVEAGVDVIVLDSAHGH------------------------SL 131 (361)
T ss_dssp SSSCHHHHHHHHHHHHHTTCCCCEEEECTTCHHHHHHHHHTTCSEEEECCSCCS------------------------BH
T ss_pred cCCCHHHHHHHHHHHHhccCceEEEEeCCCHHHHHHHHHHcCcCeEEEeCCCCC------------------------cH
Confidence 4577787777777653 5677788999999999988731 24
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeC-CC-cccCCCcCCCC
Q 025135 77 FLMQLVREVIVAIGADRVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQ-PR-YTAYGQTESGR 154 (257)
Q Consensus 77 ~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~-~~-~~~~~~~~~~~ 154 (257)
.+.+.|+.+|+.++ .+|.+.-- .+. +.++.+.++| +|+|.+.. +. .... ....+
T Consensus 132 ~~~~~i~~i~~~~~-~~Vivg~v-----------~t~----e~A~~l~~aG------aD~I~VG~~~Gs~~~t-r~~~g- 187 (361)
T 3khj_A 132 NIIRTLKEIKSKMN-IDVIVGNV-----------VTE----EATKELIENG------ADGIKVGIGPGSICTT-RIVAG- 187 (361)
T ss_dssp HHHHHHHHHHHHCC-CEEEEEEE-----------CSH----HHHHHHHHTT------CSEEEECSSCCTTCCH-HHHTC-
T ss_pred HHHHHHHHHHHhcC-CcEEEccC-----------CCH----HHHHHHHHcC------cCEEEEecCCCcCCCc-ccccC-
Confidence 67888999999884 36665322 123 3467788999 89998731 11 0000 00000
Q ss_pred CCCchhHHHHHHHH---HHHhCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCchHHHHH
Q 025135 155 PGTEDEEAQLLRTW---RRSYQGTFICSGGF-TRELGIQALAEDGADLVAYGRLFISNPDLVLRF 215 (257)
Q Consensus 155 ~~~~~~~~~~~~~i---r~~~~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~ 215 (257)
. ..+ ....+..+ .+.+++|||+.||| +++++.++|..| +|+|++|+.|+..++.+-++
T Consensus 188 ~-g~p-~~~~i~~v~~~~~~~~iPVIA~GGI~~~~di~kala~G-Ad~V~vGs~~~~t~Esp~~~ 249 (361)
T 3khj_A 188 V-GVP-QITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVG-ASSVMIGSILAGTEESPGEK 249 (361)
T ss_dssp B-CCC-HHHHHHHHHHHHHHHTCCEEEESCCCSHHHHHHHHHHT-CSEEEESTTTTTBTTSSCEE
T ss_pred C-CCC-cHHHHHHHHHHHhhcCCeEEEECCCCCHHHHHHHHHcC-CCEEEEChhhhcCCcCCcch
Confidence 0 011 22333333 45568999999999 899999999998 99999999999998876543
No 112
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=98.89 E-value=1.1e-08 Score=94.34 Aligned_cols=132 Identities=14% Similarity=0.108 Sum_probs=97.2
Q ss_pred HHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCch-hhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCCCCC
Q 025135 29 QAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSI-ENRCRFLMQLVREVIVAIGAD-RVGVRMSPAIDHLD 106 (257)
Q Consensus 29 ~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~-enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~~~~ 106 (257)
+.|+.+.+.||..+.|+.+...-.. .++|.+ ....+...++|++||+++|++ +|.++.+. .
T Consensus 158 ~~a~~~~~~G~~~~Kik~g~~~~~~------------~~~g~~~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~--~--- 220 (400)
T 4dxk_A 158 ELAHSLLEDGITAMKIWPFDAAAEK------------TRGQYISMPDLKSALEPFEKIRKAVGDKMDIMVEFHS--M--- 220 (400)
T ss_dssp HHHHHHHHTTCCEEEECTTHHHHHH------------HTTSCCCHHHHHHHHHHHHHHHHHHGGGSEEEEECTT--C---
T ss_pred HHHHHHHHhCCCEEEEcCCCccccc------------cccCcCCHHHHHHHHHHHHHHHHHcCCCceEEEECCC--C---
Confidence 3445677899999999865200000 011211 234678899999999999987 68887763 2
Q ss_pred CCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHH
Q 025135 107 ATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRE 185 (257)
Q Consensus 107 ~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~ 185 (257)
.+.+++.++++.|++.+ ++||+ +|.. +.....++.+++.+++||++.+.+ +++
T Consensus 221 ----~~~~~A~~~~~~L~~~~------i~~iE--eP~~--------------~~~~~~~~~l~~~~~iPIa~dE~~~~~~ 274 (400)
T 4dxk_A 221 ----WQLLPAMQIAKALTPYQ------TFWHE--DPIK--------------MDSLSSLTRYAAVSPAPISASETLGSRW 274 (400)
T ss_dssp ----BCHHHHHHHHHHTGGGC------CSEEE--CCBC--------------TTSGGGHHHHHHHCSSCEEECTTCCHHH
T ss_pred ----CCHHHHHHHHHHHhhcC------CCEEE--cCCC--------------cccHHHHHHHHHhCCCCEEecCCcCCHH
Confidence 35789999999999999 89998 4421 112234577899999999999998 899
Q ss_pred HHHHHHHcCCCcEEEech
Q 025135 186 LGIQALAEDGADLVAYGR 203 (257)
Q Consensus 186 ~a~~~l~~g~~D~V~igR 203 (257)
+++++|+.+.+|+|.+-=
T Consensus 275 ~~~~~l~~~a~d~v~~d~ 292 (400)
T 4dxk_A 275 AFRDLLETGAAGVVMLDI 292 (400)
T ss_dssp HHHHHHHTTCCCEEEECT
T ss_pred HHHHHHHcCCCCEEEeCc
Confidence 999999999999998743
No 113
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=98.89 E-value=1.6e-08 Score=86.19 Aligned_cols=130 Identities=12% Similarity=0.148 Sum_probs=89.0
Q ss_pred HHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCC
Q 025135 29 QAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDAT 108 (257)
Q Consensus 29 ~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~ 108 (257)
+.++.+.++|+|.|.+|..+ +.+.+ | ..+.++++.+|+.++..++++.++
T Consensus 92 ~~i~~~~~~Gad~V~l~~~~------------~~~~~--~-------~~~~~~i~~i~~~~~~~~v~~~~~--------- 141 (234)
T 1yxy_A 92 TEVDQLAALNIAVIAMDCTK------------RDRHD--G-------LDIASFIRQVKEKYPNQLLMADIS--------- 141 (234)
T ss_dssp HHHHHHHTTTCSEEEEECCS------------SCCTT--C-------CCHHHHHHHHHHHCTTCEEEEECS---------
T ss_pred HHHHHHHHcCCCEEEEcccc------------cCCCC--C-------ccHHHHHHHHHHhCCCCeEEEeCC---------
Confidence 44566788999999999865 11111 1 135789999999885436776554
Q ss_pred CCCcHHHHHHHHHHHHhcCCccCCceeEE--EeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHH
Q 025135 109 DSDPLGLGLAVIQGLNKLQIDQGAKLTYL--HVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRE 185 (257)
Q Consensus 109 ~~~~~~~~~~l~~~L~~~G~~~~~~vd~i--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~ 185 (257)
+.++ ++.+.+.| +|+| +++.. ..... . ........++.+++. ++||++.||+ |++
T Consensus 142 ---t~~e----a~~a~~~G------ad~i~~~v~g~--~~~~~----~--~~~~~~~~i~~~~~~-~ipvia~GGI~s~~ 199 (234)
T 1yxy_A 142 ---TFDE----GLVAHQAG------IDFVGTTLSGY--TPYSR----Q--EAGPDVALIEALCKA-GIAVIAEGKIHSPE 199 (234)
T ss_dssp ---SHHH----HHHHHHTT------CSEEECTTTTS--STTSC----C--SSSCCHHHHHHHHHT-TCCEEEESCCCSHH
T ss_pred ---CHHH----HHHHHHcC------CCEEeeecccc--CCCCc----C--CCCCCHHHHHHHHhC-CCCEEEECCCCCHH
Confidence 2333 56677889 8999 44431 11000 0 011224566777777 8999999999 699
Q ss_pred HHHHHHHcCCCcEEEechHHhhCchHH
Q 025135 186 LGIQALAEDGADLVAYGRLFISNPDLV 212 (257)
Q Consensus 186 ~a~~~l~~g~~D~V~igR~~iadP~l~ 212 (257)
++.++++.| +|.|++||+++. |...
T Consensus 200 ~~~~~~~~G-ad~v~vGsal~~-p~~~ 224 (234)
T 1yxy_A 200 EAKKINDLG-VAGIVVGGAITR-PKEI 224 (234)
T ss_dssp HHHHHHTTC-CSEEEECHHHHC-HHHH
T ss_pred HHHHHHHCC-CCEEEEchHHhC-hHHH
Confidence 999999987 999999999887 7554
No 114
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=98.89 E-value=6e-08 Score=88.92 Aligned_cols=126 Identities=12% Similarity=0.149 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCC
Q 025135 25 DQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAID 103 (257)
Q Consensus 25 ~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~ 103 (257)
+++++.|+.+.+.||..++|+.|. + .+--.+.|++||+++|++ +|.+..+. .
T Consensus 144 e~~~~~a~~~~~~Gf~~~KlK~g~---------------------~----~~~d~~~v~avR~a~g~~~~L~vDaN~--~ 196 (379)
T 3r0u_A 144 AETIQNIQNGVEANFTAIKVKTGA---------------------D----FNRDIQLLKALDNEFSKNIKFRFDANQ--G 196 (379)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSS---------------------C----HHHHHHHHHHHHHHCCTTSEEEEECTT--C
T ss_pred HHHHHHHHHHHHcCCCEEeeecCC---------------------C----HHHHHHHHHHHHHhcCCCCeEEEeCCC--C
Confidence 456667777788999999998753 1 234578899999999987 67776653 2
Q ss_pred CCCCCCCCcHHHHHHHHHHHHh--cCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCC
Q 025135 104 HLDATDSDPLGLGLAVIQGLNK--LQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGG 181 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~L~~--~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~ 181 (257)
.+.++++++++.|++ .+ +.|++ +|. .+.....++.+++.+++||++.+.
T Consensus 197 -------w~~~~A~~~~~~l~~~~~~------l~~iE--eP~--------------~~~d~~~~~~l~~~~~iPIa~dE~ 247 (379)
T 3r0u_A 197 -------WNLAQTKQFIEEINKYSLN------VEIIE--QPV--------------KYYDIKAMAEITKFSNIPVVADES 247 (379)
T ss_dssp -------CCHHHHHHHHHHHHTSCCC------EEEEE--CCS--------------CTTCHHHHHHHHHHCSSCEEESTT
T ss_pred -------cCHHHHHHHHHHHhhcCCC------cEEEE--CCC--------------CcccHHHHHHHHhcCCCCEEeCCc
Confidence 357889999999999 77 88887 541 122345667899999999999998
Q ss_pred C-CHHHHHHHHHcCCCcEEEechHHh
Q 025135 182 F-TRELGIQALAEDGADLVAYGRLFI 206 (257)
Q Consensus 182 i-t~~~a~~~l~~g~~D~V~igR~~i 206 (257)
+ +++++.++++.+.+|+|.+--..+
T Consensus 248 ~~~~~~~~~~i~~~a~d~v~~k~~~~ 273 (379)
T 3r0u_A 248 VFDAKDAERVIDEQACNMINIKLAKT 273 (379)
T ss_dssp CSSHHHHHHHHHTTCCSEEEECHHHH
T ss_pred cCCHHHHHHHHHcCCCCEEEECcccc
Confidence 8 899999999999999998855444
No 115
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=98.89 E-value=5.5e-09 Score=89.53 Aligned_cols=88 Identities=14% Similarity=0.023 Sum_probs=66.8
Q ss_pred HHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHHHc
Q 025135 115 LGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQALAE 193 (257)
Q Consensus 115 ~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~~ 193 (257)
+..++++.+++.| ++.|.++........ ....+..++++++.+++||+++||+ +++++.++++.
T Consensus 150 ~~~e~~~~~~~~G------~~~i~~~~~~~~~~~---------~g~~~~~~~~l~~~~~ipvia~GGI~~~~d~~~~~~~ 214 (244)
T 2y88_A 150 DLWDVLERLDSEG------CSRFVVTDITKDGTL---------GGPNLDLLAGVADRTDAPVIASGGVSSLDDLRAIATL 214 (244)
T ss_dssp EHHHHHHHHHHTT------CCCEEEEETTTTTTT---------SCCCHHHHHHHHTTCSSCEEEESCCCSHHHHHHHHTT
T ss_pred CHHHHHHHHHhCC------CCEEEEEecCCcccc---------CCCCHHHHHHHHHhCCCCEEEECCCCCHHHHHHHHhh
Confidence 3466788889999 777766653221110 1123467778888889999999999 78999999988
Q ss_pred C--CCcEEEechHHhhCchHHHHHHc
Q 025135 194 D--GADLVAYGRLFISNPDLVLRFKL 217 (257)
Q Consensus 194 g--~~D~V~igR~~iadP~l~~k~~~ 217 (257)
+ ++|.|++||+++.+|+++.++++
T Consensus 215 ~~~Gad~v~vG~al~~~~~~~~~~~~ 240 (244)
T 2y88_A 215 THRGVEGAIVGKALYARRFTLPQALA 240 (244)
T ss_dssp GGGTEEEEEECHHHHTTSSCHHHHHH
T ss_pred ccCCCCEEEEcHHHHCCCcCHHHHHH
Confidence 3 49999999999999999887764
No 116
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=98.88 E-value=4.7e-08 Score=88.63 Aligned_cols=103 Identities=14% Similarity=0.016 Sum_probs=78.4
Q ss_pred hhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCC
Q 025135 75 CRFLMQLVREVIVAIGADRVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGR 154 (257)
Q Consensus 75 ~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~ 154 (257)
..+..+.|+.+|+.++. ||.+|... +. +.++.++++| +|.|.+++....+..
T Consensus 202 ~~~~w~~i~~lr~~~~~-PvivK~v~-----------~~----e~A~~a~~~G------aD~I~vsn~GG~~~d------ 253 (352)
T 3sgz_A 202 ASFCWNDLSLLQSITRL-PIILKGIL-----------TK----EDAELAMKHN------VQGIVVSNHGGRQLD------ 253 (352)
T ss_dssp TTCCHHHHHHHHHHCCS-CEEEEEEC-----------SH----HHHHHHHHTT------CSEEEECCGGGTSSC------
T ss_pred CCCCHHHHHHHHHhcCC-CEEEEecC-----------cH----HHHHHHHHcC------CCEEEEeCCCCCccC------
Confidence 34667899999999853 89999863 23 3477888999 999988653222111
Q ss_pred CCCchhHHHHHHHHHHHh--CCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhC
Q 025135 155 PGTEDEEAQLLRTWRRSY--QGTFICSGGF-TRELGIQALAEDGADLVAYGRLFISN 208 (257)
Q Consensus 155 ~~~~~~~~~~~~~ir~~~--~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~iad 208 (257)
..+.....+..+++.+ ++|||+.||| +..++.++|.-| ||+|++||+++..
T Consensus 254 --~~~~~~~~L~~i~~av~~~ipVia~GGI~~g~Dv~kaLalG-A~aV~iGr~~l~~ 307 (352)
T 3sgz_A 254 --EVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALG-ARCIFLGRPILWG 307 (352)
T ss_dssp --SSCCHHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTT-CSEEEESHHHHHH
T ss_pred --CCccHHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcC-CCEEEECHHHHHH
Confidence 1223456777788887 6899999999 999999999987 9999999999954
No 117
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=98.87 E-value=1.3e-08 Score=93.22 Aligned_cols=128 Identities=6% Similarity=0.103 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCCC
Q 025135 26 QYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAIDH 104 (257)
Q Consensus 26 ~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~~ 104 (257)
+.++.|+.+.+.||..++|+.|.. + .+--.+++++||+++|++ +|.++.+. .|
T Consensus 149 ~~~~~a~~~~~~G~~~~K~Kvg~~--------------------~----~~~d~~~v~avR~~~g~~~~l~vDan~--~~ 202 (377)
T 3my9_A 149 ADLERMRAMVPAGHTVFKMKTGVK--------------------P----HAEELRILETMRGEFGERIDLRLDFNQ--AL 202 (377)
T ss_dssp HHHHHHHHHTTTTCCEEEEECSSS--------------------C----HHHHHHHHHHHHHHHGGGSEEEEECTT--CC
T ss_pred HHHHHHHHHHHcCCCEEEEccCCC--------------------c----HHHHHHHHHHHHHHhCCCCeEEEeCCC--Cc
Confidence 344556667778999999997651 1 234568899999999987 67777663 22
Q ss_pred CCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-C
Q 025135 105 LDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-T 183 (257)
Q Consensus 105 ~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t 183 (257)
+.+++.++++.|++.+ ++||+ +|. .+.....++.+++.+++||++.+.+ +
T Consensus 203 -------~~~~A~~~~~~l~~~~------i~~iE--qP~--------------~~~d~~~~~~l~~~~~ipIa~dE~~~~ 253 (377)
T 3my9_A 203 -------TPFGAMKILRDVDAFR------PTFIE--QPV--------------PRRHLDAMAGFAAALDTPILADESCFD 253 (377)
T ss_dssp -------CTTTHHHHHHHHHTTC------CSCEE--CCS--------------CTTCHHHHHHHHHHCSSCEEESTTCSS
T ss_pred -------CHHHHHHHHHHHhhcC------CCEEE--CCC--------------CccCHHHHHHHHHhCCCCEEECCccCC
Confidence 3566889999999999 88887 541 1223456678999999999999998 8
Q ss_pred HHHHHHHHHcCCCcEEEechHHhhC
Q 025135 184 RELGIQALAEDGADLVAYGRLFISN 208 (257)
Q Consensus 184 ~~~a~~~l~~g~~D~V~igR~~iad 208 (257)
++++.++++.+.+|+|.+--..+.-
T Consensus 254 ~~~~~~~i~~~~~d~v~~k~~~~GG 278 (377)
T 3my9_A 254 AVDLMEVVRRQAADAISVKIMKCGG 278 (377)
T ss_dssp HHHHHHHHHHTCCSEEECCHHHHTS
T ss_pred HHHHHHHHHcCCCCEEEecccccCC
Confidence 9999999999999999986555443
No 118
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=98.86 E-value=2.9e-08 Score=90.61 Aligned_cols=124 Identities=12% Similarity=0.111 Sum_probs=94.2
Q ss_pred HHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCCCCC
Q 025135 28 RQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAIDHLD 106 (257)
Q Consensus 28 ~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~~~~ 106 (257)
.++++...+.||..++|+.|+. + .+--.+++++||+++|++ +|.+..+. .|
T Consensus 148 ~~~~~~~~~~G~~~~KiKvg~~--------------------~----~~~d~~~v~avR~~~g~~~~l~vDan~--~~-- 199 (370)
T 1chr_A 148 DSAVEMIERRRHNRFKVKLGFR--------------------S----PQDDLIHMEALSNSLGSKAYLRVDVNQ--AW-- 199 (370)
T ss_dssp HHHHHHHHTTCCCEEEEECSSS--------------------C----SHHHHHHHHHHHHHSSTTCCEEEECTT--CC--
T ss_pred HHHHHHHHHCCCCEEEEecCCC--------------------C----HHHHHHHHHHHHHhcCCCCEEEEECCC--CC--
Confidence 3444444458999999987751 1 223578899999999987 68887763 22
Q ss_pred CCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHH
Q 025135 107 ATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRE 185 (257)
Q Consensus 107 ~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~ 185 (257)
+.+++.++++.|++.| ++||+ +|. .+.....++.+++.+++||++.+.+ +++
T Consensus 200 -----~~~~a~~~~~~l~~~~------i~~iE--qP~--------------~~~~~~~~~~l~~~~~iPia~dE~~~~~~ 252 (370)
T 1chr_A 200 -----DEQVASVYIPELEALG------VELIE--QPV--------------GRENTQALRRLSDNNRVAIMADESLSTLA 252 (370)
T ss_dssp -----CTTHHHHHTHHHHTTT------EEEEE--CCS--------------CTTCHHHHHHHHHHSCSEEEESSSCCSHH
T ss_pred -----CHHHHHHHHHHHHhcC------CCEEE--CCC--------------CcccHHHHHHHHhhCCCCEEeCCCcCCHH
Confidence 3567899999999999 99987 541 1223456678999999999999998 899
Q ss_pred HHHHHHHcCCCcEEEechHHh
Q 025135 186 LGIQALAEDGADLVAYGRLFI 206 (257)
Q Consensus 186 ~a~~~l~~g~~D~V~igR~~i 206 (257)
++.++++.+.+|+|.+--..+
T Consensus 253 ~~~~~~~~~~~d~v~~k~~~~ 273 (370)
T 1chr_A 253 SAFDLARDRSVDVFSLKLCNM 273 (370)
T ss_dssp HHHHHHTTTSCSEEEECTTTS
T ss_pred HHHHHHHcCCCCEEEECcccc
Confidence 999999999999999865444
No 119
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=98.86 E-value=2.4e-08 Score=94.65 Aligned_cols=136 Identities=16% Similarity=0.123 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCC
Q 025135 26 QYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHL 105 (257)
Q Consensus 26 ~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~ 105 (257)
++.+.|+.+.++|+|.|+|+.+|| ..+.+.+.|+.+|++++.-+|.+.--
T Consensus 231 d~~~~a~~l~~aG~d~I~id~a~g------------------------~~~~~~~~i~~ir~~~p~~~Vi~g~v------ 280 (496)
T 4fxs_A 231 GNEERVKALVEAGVDVLLIDSSHG------------------------HSEGVLQRIRETRAAYPHLEIIGGNV------ 280 (496)
T ss_dssp CCHHHHHHHHHTTCSEEEEECSCT------------------------TSHHHHHHHHHHHHHCTTCCEEEEEE------
T ss_pred chHHHHHHHHhccCceEEeccccc------------------------cchHHHHHHHHHHHHCCCceEEEccc------
Confidence 346667788899999999999983 13568899999999996446655211
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCC-CcCCCCCCCchhHHHHHHHHHH---HhCCcEEEeCC
Q 025135 106 DATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYG-QTESGRPGTEDEEAQLLRTWRR---SYQGTFICSGG 181 (257)
Q Consensus 106 ~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ir~---~~~~pvi~~G~ 181 (257)
.+. +.++.|.++| +|+|.+..+.-.... .... .. ..+ ....+..+.+ ..++|||+.||
T Consensus 281 -----~t~----e~a~~l~~aG------aD~I~Vg~g~Gs~~~tr~~~-g~-g~p-~~~~i~~v~~~~~~~~iPVIa~GG 342 (496)
T 4fxs_A 281 -----ATA----EGARALIEAG------VSAVKVGIGPGSICTTRIVT-GV-GVP-QITAIADAAGVANEYGIPVIADGG 342 (496)
T ss_dssp -----CSH----HHHHHHHHHT------CSEEEECSSCCTTBCHHHHH-CC-CCC-HHHHHHHHHHHHGGGTCCEEEESC
T ss_pred -----CcH----HHHHHHHHhC------CCEEEECCCCCcCccccccc-CC-Ccc-HHHHHHHHHHHhccCCCeEEEeCC
Confidence 123 3467788999 899887421100000 0000 00 111 2334444444 34799999999
Q ss_pred C-CHHHHHHHHHcCCCcEEEechHHhhCch
Q 025135 182 F-TRELGIQALAEDGADLVAYGRLFISNPD 210 (257)
Q Consensus 182 i-t~~~a~~~l~~g~~D~V~igR~~iadP~ 210 (257)
+ ++.++.++|..| ||+|++||.|+.-.+
T Consensus 343 I~~~~di~kala~G-Ad~V~iGs~f~~t~E 371 (496)
T 4fxs_A 343 IRFSGDISKAIAAG-ASCVMVGSMFAGTEE 371 (496)
T ss_dssp CCSHHHHHHHHHTT-CSEEEESTTTTTBTT
T ss_pred CCCHHHHHHHHHcC-CCeEEecHHHhcCCC
Confidence 9 899999999997 999999999997544
No 120
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.85 E-value=8.2e-09 Score=88.91 Aligned_cols=87 Identities=20% Similarity=0.173 Sum_probs=71.1
Q ss_pred HHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHHHc
Q 025135 115 LGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQALAE 193 (257)
Q Consensus 115 ~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~~ 193 (257)
+..++++.+++.| +++|+++....... ........++.+++.+++||+++|++ ++++++++++.
T Consensus 36 ~~~~~a~~~~~~G------~~~i~v~d~~~~~~---------~~~~~~~~i~~i~~~~~ipvi~~Ggi~~~~~~~~~l~~ 100 (247)
T 3tdn_A 36 LLRDWVVEVEKRG------AGEILLTSIDRDGT---------KSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLR 100 (247)
T ss_dssp EHHHHHHHHHHTT------CSEEEEEETTTTTC---------SSCCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHT
T ss_pred CHHHHHHHHHHcC------CCEEEEEecCcccC---------CCcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHc
Confidence 3567999999999 99999876422111 11223567788999999999999999 89999999998
Q ss_pred CCCcEEEechHHhhCchHHHHHHc
Q 025135 194 DGADLVAYGRLFISNPDLVLRFKL 217 (257)
Q Consensus 194 g~~D~V~igR~~iadP~l~~k~~~ 217 (257)
| +|.|.+||.++.||+|+.++.+
T Consensus 101 G-ad~V~ig~~~l~dp~~~~~~~~ 123 (247)
T 3tdn_A 101 G-ADKVSINTAAVENPSLITQIAQ 123 (247)
T ss_dssp T-CSEECCSHHHHHCTHHHHHHHH
T ss_pred C-CCeeehhhHHhhChHHHHHHHH
Confidence 8 9999999999999999988875
No 121
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=98.84 E-value=9.8e-09 Score=93.78 Aligned_cols=118 Identities=17% Similarity=0.188 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAI 102 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~ 102 (257)
.+++++.|+++.++||+.|+||.+ | +...++|++||+++ ++ +|.+..+.
T Consensus 149 ~~~~~~~a~~~~~~G~~~iKik~~----------~-----------------~~d~~~v~avr~a~-~~~~l~vDan~-- 198 (375)
T 1r0m_A 149 EQATVDLVRRHVEQGYRRIKLKIK----------P-----------------GWDVQPVRATREAF-PDIRLTVDANS-- 198 (375)
T ss_dssp HHHHHHHHHHHHHTTCSCEEEECB----------T-----------------TBSHHHHHHHHHHC-TTSCEEEECTT--
T ss_pred HHHHHHHHHHHHHhcccEEEEecC----------h-----------------HHHHHHHHHHHHHc-CCCeEEEeCCC--
Confidence 355778899999999999999852 2 23458899999999 65 67777653
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC
Q 025135 103 DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF 182 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i 182 (257)
.| +.++ .++++.|++.+ ++||+ +|- .+......+.+++.+++||++.+.+
T Consensus 199 ~~-------~~~~-~~~~~~l~~~~------i~~iE--qP~--------------~~~d~~~~~~l~~~~~ipIa~dE~~ 248 (375)
T 1r0m_A 199 AY-------TLAD-AGRLRQLDEYD------LTYIE--QPL--------------AWDDLVDHAELARRIRTPLCLDESV 248 (375)
T ss_dssp CC-------CGGG-HHHHHTTGGGC------CSCEE--CCS--------------CTTCSHHHHHHHHHCSSCEEESTTC
T ss_pred CC-------CHHH-HHHHHHHHhCC------CcEEE--CCC--------------CcccHHHHHHHHHhCCCCEEecCcc
Confidence 22 3456 88999999999 88887 541 1122345677899999999999998
Q ss_pred -CHHHHHHHHHcCCCcEEEe
Q 025135 183 -TRELGIQALAEDGADLVAY 201 (257)
Q Consensus 183 -t~~~a~~~l~~g~~D~V~i 201 (257)
++++++++++.+.+|+|.+
T Consensus 249 ~~~~~~~~~i~~~~~d~v~i 268 (375)
T 1r0m_A 249 ASASDARKALALGAGGVINL 268 (375)
T ss_dssp CSHHHHHHHHHHTSCSEEEE
T ss_pred CCHHHHHHHHHhCCCCEEEE
Confidence 8999999999999999998
No 122
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=98.84 E-value=1.3e-07 Score=84.81 Aligned_cols=133 Identities=18% Similarity=0.208 Sum_probs=94.0
Q ss_pred HHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCC
Q 025135 28 RQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDA 107 (257)
Q Consensus 28 ~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~ 107 (257)
.+.++.+.++|.|+|.+|+++ | .++++.+|+. |- +++..++
T Consensus 86 ~~~~~~~~~~g~d~V~~~~g~---------p--------------------~~~~~~l~~~-gi-~vi~~v~-------- 126 (328)
T 2gjl_A 86 AEYRAAIIEAGIRVVETAGND---------P--------------------GEHIAEFRRH-GV-KVIHKCT-------- 126 (328)
T ss_dssp HHHHHHHHHTTCCEEEEEESC---------C--------------------HHHHHHHHHT-TC-EEEEEES--------
T ss_pred HHHHHHHHhcCCCEEEEcCCC---------c--------------------HHHHHHHHHc-CC-CEEeeCC--------
Confidence 355667788999999998765 2 2456777765 32 5665543
Q ss_pred CCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHH
Q 025135 108 TDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TREL 186 (257)
Q Consensus 108 ~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~ 186 (257)
+.+ .++.+.+.| +|+|.++....... .+.. ....+..+..+++.+++||++.||| ++++
T Consensus 127 ----t~~----~a~~~~~~G------aD~i~v~g~~~GG~----~G~~--~~~~~~~l~~v~~~~~iPviaaGGI~~~~~ 186 (328)
T 2gjl_A 127 ----AVR----HALKAERLG------VDAVSIDGFECAGH----PGED--DIPGLVLLPAAANRLRVPIIASGGFADGRG 186 (328)
T ss_dssp ----SHH----HHHHHHHTT------CSEEEEECTTCSBC----CCSS--CCCHHHHHHHHHTTCCSCEEEESSCCSHHH
T ss_pred ----CHH----HHHHHHHcC------CCEEEEECCCCCcC----CCCc--cccHHHHHHHHHHhcCCCEEEECCCCCHHH
Confidence 233 345677889 88888764322111 0000 1123467778888889999999999 8999
Q ss_pred HHHHHHcCCCcEEEechHHhhCch------HHHHHHcCCC
Q 025135 187 GIQALAEDGADLVAYGRLFISNPD------LVLRFKLNAP 220 (257)
Q Consensus 187 a~~~l~~g~~D~V~igR~~iadP~------l~~k~~~g~~ 220 (257)
+.+++..| +|+|.+||+++..|+ +.+++.+...
T Consensus 187 v~~al~~G-AdgV~vGs~~~~~~e~~~~~~~k~~~~~~~~ 225 (328)
T 2gjl_A 187 LVAALALG-ADAINMGTRFLATRECPIHPAVKAAIRAADE 225 (328)
T ss_dssp HHHHHHHT-CSEEEESHHHHTSSSSCSCHHHHHHHHHCCT
T ss_pred HHHHHHcC-CCEEEECHHHHcCccccccHHHHHHHHhccc
Confidence 99999987 999999999999998 8888876643
No 123
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=98.84 E-value=3.4e-08 Score=93.51 Aligned_cols=136 Identities=15% Similarity=0.097 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCC
Q 025135 26 QYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHL 105 (257)
Q Consensus 26 ~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~ 105 (257)
++.+.|+.+.++|+|.|+|+.+||+ ...+.+.|+.+|+.++.-+|.+.--
T Consensus 229 ~~~~~a~~l~~aG~d~I~id~a~g~------------------------~~~~~~~v~~i~~~~p~~~Vi~g~v------ 278 (490)
T 4avf_A 229 DTGERVAALVAAGVDVVVVDTAHGH------------------------SKGVIERVRWVKQTFPDVQVIGGNI------ 278 (490)
T ss_dssp THHHHHHHHHHTTCSEEEEECSCCS------------------------BHHHHHHHHHHHHHCTTSEEEEEEE------
T ss_pred chHHHHHHHhhcccceEEecccCCc------------------------chhHHHHHHHHHHHCCCceEEEeee------
Confidence 5667778888999999999999853 2467899999999986446665311
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCC-CcCCCCCCCchhHHHHHHHHHHHh---CCcEEEeCC
Q 025135 106 DATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYG-QTESGRPGTEDEEAQLLRTWRRSY---QGTFICSGG 181 (257)
Q Consensus 106 ~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ir~~~---~~pvi~~G~ 181 (257)
.+. +.++.+.++| +|+|.+..+.-.... ... ... .. .....+..+++.+ ++|||+.||
T Consensus 279 -----~t~----e~a~~l~~aG------aD~I~vg~g~Gs~~~t~~~-~g~-g~-p~~~~l~~v~~~~~~~~iPVIa~GG 340 (490)
T 4avf_A 279 -----ATA----EAAKALAEAG------ADAVKVGIGPGSICTTRIV-AGV-GV-PQISAIANVAAALEGTGVPLIADGG 340 (490)
T ss_dssp -----CSH----HHHHHHHHTT------CSEEEECSSCSTTCHHHHH-TCB-CC-CHHHHHHHHHHHHTTTTCCEEEESC
T ss_pred -----CcH----HHHHHHHHcC------CCEEEECCCCCcCCCcccc-CCC-Cc-cHHHHHHHHHHHhccCCCcEEEeCC
Confidence 123 3467889999 899987311000000 000 000 11 2234555566543 799999999
Q ss_pred C-CHHHHHHHHHcCCCcEEEechHHhhCch
Q 025135 182 F-TRELGIQALAEDGADLVAYGRLFISNPD 210 (257)
Q Consensus 182 i-t~~~a~~~l~~g~~D~V~igR~~iadP~ 210 (257)
+ +++++.++|..| ||+|++|+.|+.-.+
T Consensus 341 I~~~~di~kal~~G-Ad~V~vGs~~~~~~E 369 (490)
T 4avf_A 341 IRFSGDLAKAMVAG-AYCVMMGSMFAGTEE 369 (490)
T ss_dssp CCSHHHHHHHHHHT-CSEEEECTTTTTBTT
T ss_pred CCCHHHHHHHHHcC-CCeeeecHHHhcCCC
Confidence 9 999999999998 999999999987554
No 124
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=98.82 E-value=1.5e-08 Score=92.37 Aligned_cols=119 Identities=13% Similarity=0.215 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAI 102 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~ 102 (257)
++++++.|+++.++||+.|+||.+ | +...+++++||+++ ++ .|.+..+.
T Consensus 142 ~~~~~~~a~~~~~~G~~~iKik~~----------~-----------------~~d~~~v~avr~a~-~~~~l~vDan~-- 191 (369)
T 2zc8_A 142 VEDTLRVVERHLEEGYRRIKLKIK----------P-----------------GWDYEVLKAVREAF-PEATLTADANS-- 191 (369)
T ss_dssp HHHHHHHHHHHHHTTCSCEEEECB----------T-----------------TBSHHHHHHHHHHC-TTSCEEEECTT--
T ss_pred HHHHHHHHHHHHHhhhheeeeecC----------h-----------------hHHHHHHHHHHHHc-CCCeEEEecCC--
Confidence 456788899999999999999852 2 33568899999999 65 56665542
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC
Q 025135 103 DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF 182 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i 182 (257)
.| +.++ .++++.|++.+ ++||+ +|- .+......+.+++.+++||++.+.+
T Consensus 192 ~~-------~~~~-~~~~~~l~~~~------i~~iE--qP~--------------~~~d~~~~~~l~~~~~ipIa~dE~~ 241 (369)
T 2zc8_A 192 AY-------SLAN-LAQLKRLDELR------LDYIE--QPL--------------AYDDLLDHAKLQRELSTPICLDESL 241 (369)
T ss_dssp CC-------CGGG-HHHHHGGGGGC------CSCEE--CCS--------------CTTCSHHHHHHHHHCSSCEEESTTC
T ss_pred CC-------CHHH-HHHHHHHHhCC------CcEEE--CCC--------------CcccHHHHHHHHhhCCCCEEEcCcc
Confidence 22 3456 88999999999 88887 541 1122345677899999999999998
Q ss_pred -CHHHHHHHHHcCCCcEEEec
Q 025135 183 -TRELGIQALAEDGADLVAYG 202 (257)
Q Consensus 183 -t~~~a~~~l~~g~~D~V~ig 202 (257)
++++++++++.+.+|+|.+=
T Consensus 242 ~~~~~~~~~i~~~~~d~v~ik 262 (369)
T 2zc8_A 242 TGAEKARKAIELGAGRVFNVK 262 (369)
T ss_dssp CSHHHHHHHHHHTCCSEEEEC
T ss_pred CCHHHHHHHHHhCCCCEEEEc
Confidence 89999999999999999883
No 125
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=98.77 E-value=1.8e-07 Score=87.37 Aligned_cols=127 Identities=11% Similarity=0.106 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAI 102 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~ 102 (257)
.+++++.|+.+.+.||..+.|+.|. + ..--.+.|++||+++|++ .|.+..+..
T Consensus 202 ~e~~~~~a~~~~~~Gf~~~KlKvG~---------------------~----~~~d~~~v~avR~a~G~~~~l~vDaN~~- 255 (441)
T 4a35_A 202 DDTLKQLCAQALKDGWTRFKVKVGA---------------------D----LQDDMRRCQIIRDMIGPEKTLMMDANQR- 255 (441)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECSS---------------------C----HHHHHHHHHHHHHHHCTTSEEEEECTTC-
T ss_pred HHHHHHHHHHHHHCCCCEEEEcCCC---------------------C----HHHHHHHHHHHHHHhCCCCeEEEECCCC-
Confidence 3567788888889999999998753 1 233567899999999987 677766632
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHH---hCCcEEEe
Q 025135 103 DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRS---YQGTFICS 179 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~---~~~pvi~~ 179 (257)
.+.++++++++.|++.+ +.|++ +|. .+.....++.+++. .++||++.
T Consensus 256 --------~~~~~A~~~~~~L~~~~------~~~iE--eP~--------------~~~d~~~~~~l~~~l~~~~iPIa~g 305 (441)
T 4a35_A 256 --------WDVPEAVEWMSKLAKFK------PLWIE--EPT--------------SPDDILGHATISKALVPLGIGIATG 305 (441)
T ss_dssp --------CCHHHHHHHHHHHGGGC------CSEEE--CCS--------------CTTCHHHHHHHHHHHGGGTCEEEEC
T ss_pred --------CCHHHHHHHHHhhcccC------ccEEe--CCC--------------CcccHHHHHHHHHhccCCCCCEEeC
Confidence 35788999999999999 88987 552 12223455678886 78999998
Q ss_pred CCC-CHHHHHHHHHcCCCcEEEechHHh
Q 025135 180 GGF-TRELGIQALAEDGADLVAYGRLFI 206 (257)
Q Consensus 180 G~i-t~~~a~~~l~~g~~D~V~igR~~i 206 (257)
..+ ++.++.++++.+.+|+|.+--..+
T Consensus 306 E~~~~~~~~~~~l~~~a~div~~d~~~~ 333 (441)
T 4a35_A 306 EQCHNRVIFKQLLQAKALQFLQIDSCRL 333 (441)
T ss_dssp TTCCSHHHHHHHHHTTCCSEECCCTTTS
T ss_pred CccccHHHHHHHHHcCCCCEEEECcccc
Confidence 887 899999999999999998754433
No 126
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=98.77 E-value=5.2e-08 Score=89.96 Aligned_cols=127 Identities=11% Similarity=0.110 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAI 102 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~ 102 (257)
.+++++.|+.+.+.||..++|+.+ |. . -.++|++||+++|++ .|.+..+.
T Consensus 164 ~e~~~~~a~~~~~~G~~~iKlKv~----------~~----~-------------d~~~v~avR~a~G~~~~L~vDaN~-- 214 (400)
T 3mwc_A 164 IETLIHQVEESLQEGYRRIKIKIK----------PG----W-------------DVEPLQETRRAVGDHFPLWTDANS-- 214 (400)
T ss_dssp HHHHHHHHHHHHHHTCSCEEEECB----------TT----B-------------SHHHHHHHHHHHCTTSCEEEECTT--
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeC----------cc----h-------------HHHHHHHHHHhcCCCCEEEEeCCC--
Confidence 466777888888999999999863 11 1 267899999999987 67777653
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC
Q 025135 103 DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF 182 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i 182 (257)
.| +.++ .++++.|++.+ +.||+ +|. .+.....++.+++.+++||++.+.+
T Consensus 215 ~w-------~~~~-~~~~~~l~~~~------i~~iE--qP~--------------~~~d~~~~~~l~~~~~iPIa~dE~~ 264 (400)
T 3mwc_A 215 SF-------ELDQ-WETFKAMDAAK------CLFHE--QPL--------------HYEALLDLKELGERIETPICLDESL 264 (400)
T ss_dssp CC-------CGGG-HHHHHHHGGGC------CSCEE--SCS--------------CTTCHHHHHHHHHHSSSCEEESTTC
T ss_pred CC-------CHHH-HHHHHHHHhcC------CCEEe--CCC--------------ChhhHHHHHHHHhhCCCCEEEeCCc
Confidence 22 3445 78899999999 88887 541 1223456678999999999999998
Q ss_pred -CHHHHHHHHHcCCCcEEEechHHhhCc
Q 025135 183 -TRELGIQALAEDGADLVAYGRLFISNP 209 (257)
Q Consensus 183 -t~~~a~~~l~~g~~D~V~igR~~iadP 209 (257)
+++++.++++.+.+|+|.+--..+.-.
T Consensus 265 ~~~~~~~~~~~~~~~d~v~~k~~~~GGi 292 (400)
T 3mwc_A 265 ISSRVAEFVAKLGISNIWNIKIQRVGGL 292 (400)
T ss_dssp CSHHHHHHHHHTTCCSEEEECHHHHTSH
T ss_pred CCHHHHHHHHhcCCCCEEEEcchhhCCH
Confidence 899999999999999999876655444
No 127
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=98.76 E-value=8.2e-08 Score=88.09 Aligned_cols=103 Identities=13% Similarity=-0.009 Sum_probs=76.7
Q ss_pred hHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCC
Q 025135 76 RFLMQLVREVIVAIGADRVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRP 155 (257)
Q Consensus 76 r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~ 155 (257)
.+..++|++||++++. ||.+|... +. +.++.+.++| +|.|.++.....+..
T Consensus 211 ~~~~~~i~~i~~~~~~-Pv~vkgv~-----------t~----e~a~~a~~aG------ad~I~vs~~gg~~~d------- 261 (380)
T 1p4c_A 211 SFNWEALRWLRDLWPH-KLLVKGLL-----------SA----EDADRCIAEG------ADGVILSNHGGRQLD------- 261 (380)
T ss_dssp TCCHHHHHHHHHHCCS-EEEEEEEC-----------CH----HHHHHHHHTT------CSEEEECCGGGTSCT-------
T ss_pred cccHHHHHHHHHhcCC-CEEEEecC-----------cH----HHHHHHHHcC------CCEEEEcCCCCCcCC-------
Confidence 4567999999999853 88888531 23 3577888999 899988532111110
Q ss_pred CCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCc
Q 025135 156 GTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQALAEDGADLVAYGRLFISNP 209 (257)
Q Consensus 156 ~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~iadP 209 (257)
... .....+..+++.+++|||++||+ +.+++.++|..| ||+|++||+++...
T Consensus 262 ~~~-~~~~~l~~v~~~~~~pVia~GGI~~~~dv~kal~~G-AdaV~iGr~~l~~~ 314 (380)
T 1p4c_A 262 CAI-SPMEVLAQSVAKTGKPVLIDSGFRRGSDIVKALALG-AEAVLLGRATLYGL 314 (380)
T ss_dssp TCC-CGGGTHHHHHHHHCSCEEECSSCCSHHHHHHHHHTT-CSCEEESHHHHHHH
T ss_pred CCc-CHHHHHHHHHHHcCCeEEEECCCCCHHHHHHHHHhC-CcHhhehHHHHHHH
Confidence 011 23456677888899999999999 899999999987 99999999999755
No 128
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=98.74 E-value=1.3e-07 Score=86.38 Aligned_cols=137 Identities=17% Similarity=0.126 Sum_probs=91.3
Q ss_pred HHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCC
Q 025135 28 RQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDA 107 (257)
Q Consensus 28 ~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~ 107 (257)
.+.++.+.++|+|.|.|+.+||+ .+...+.|+.+|+..+.-+|.+.--
T Consensus 110 ~~~~~~lieaGvd~I~idta~G~------------------------~~~~~~~I~~ik~~~p~v~Vi~G~v-------- 157 (366)
T 4fo4_A 110 EERVKALVEAGVDVLLIDSSHGH------------------------SEGVLQRIRETRAAYPHLEIIGGNV-------- 157 (366)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTT------------------------SHHHHHHHHHHHHHCTTCEEEEEEE--------
T ss_pred HHHHHHHHhCCCCEEEEeCCCCC------------------------CHHHHHHHHHHHHhcCCCceEeeee--------
Confidence 56678888999999999988741 2357788999999885435544211
Q ss_pred CCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeC-CCcccCCCcCCCCCCCchhHHHHHHHHH---HHhCCcEEEeCCC-
Q 025135 108 TDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQ-PRYTAYGQTESGRPGTEDEEAQLLRTWR---RSYQGTFICSGGF- 182 (257)
Q Consensus 108 ~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ir---~~~~~pvi~~G~i- 182 (257)
.+.+ .++.++++| +|+|.+.. +.......... .. ..+ ....+..++ +.+++|||+.|||
T Consensus 158 ---~t~e----~A~~a~~aG------AD~I~vG~gpGs~~~tr~~~-g~-g~p-~~~~l~~v~~~~~~~~iPVIA~GGI~ 221 (366)
T 4fo4_A 158 ---ATAE----GARALIEAG------VSAVKVGIGPGSICTTRIVT-GV-GVP-QITAIADAAGVANEYGIPVIADGGIR 221 (366)
T ss_dssp ---CSHH----HHHHHHHHT------CSEEEECSSCSTTBCHHHHH-CC-CCC-HHHHHHHHHHHHGGGTCCEEEESCCC
T ss_pred ---CCHH----HHHHHHHcC------CCEEEEecCCCCCCCccccc-Cc-ccc-hHHHHHHHHHHHhhcCCeEEEeCCCC
Confidence 1233 466788899 89998721 11000000000 00 011 223344444 3568999999999
Q ss_pred CHHHHHHHHHcCCCcEEEechHHhhCchHHH
Q 025135 183 TRELGIQALAEDGADLVAYGRLFISNPDLVL 213 (257)
Q Consensus 183 t~~~a~~~l~~g~~D~V~igR~~iadP~l~~ 213 (257)
++.++.++|..| +|.|++|+.|+.-++-+-
T Consensus 222 ~~~di~kala~G-Ad~V~vGs~f~~t~Esp~ 251 (366)
T 4fo4_A 222 FSGDISKAIAAG-ASCVMVGSMFAGTEEAPG 251 (366)
T ss_dssp SHHHHHHHHHTT-CSEEEESTTTTTBTTSSS
T ss_pred CHHHHHHHHHcC-CCEEEEChHhhcCCCCCc
Confidence 899999999998 999999999998876543
No 129
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=98.74 E-value=1.1e-07 Score=87.33 Aligned_cols=125 Identities=13% Similarity=0.097 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCCC
Q 025135 26 QYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAIDH 104 (257)
Q Consensus 26 ~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~~ 104 (257)
+.++.|+.+.+.||..++|+.|.. + .+--.++|++||+++ ++ .|.+..+. .
T Consensus 151 ~~~~~a~~~~~~G~~~~K~Kvg~~--------------------~----~~~d~~~v~avR~a~-~~~~l~vDan~--~- 202 (385)
T 3i6e_A 151 ADIALMERLRADGVGLIKLKTGFR--------------------D----HAFDIMRLELIARDF-PEFRVRVDYNQ--G- 202 (385)
T ss_dssp HHHHHHHHHHHHTCCEEEEECSSS--------------------C----HHHHHHHHHHHHHHC-TTSEEEEECTT--C-
T ss_pred HHHHHHHHHHHcCCCEEEEecCCC--------------------C----HHHHHHHHHHHHHhC-CCCeEEEECCC--C-
Confidence 344556666778999999987641 1 234568899999999 66 67777663 2
Q ss_pred CCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-C
Q 025135 105 LDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-T 183 (257)
Q Consensus 105 ~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t 183 (257)
.+.+++.++++.|++.+ +.||+ +|. .+.....++.+++.+++||++.+.+ +
T Consensus 203 ------~~~~~A~~~~~~L~~~~------i~~iE--qP~--------------~~~d~~~~~~l~~~~~iPIa~dE~~~~ 254 (385)
T 3i6e_A 203 ------LEIDEAVPRVLDVAQFQ------PDFIE--QPV--------------RAHHFELMARLRGLTDVPLLADESVYG 254 (385)
T ss_dssp ------CCGGGHHHHHHHHHTTC------CSCEE--CCS--------------CTTCHHHHHHHHTTCSSCEEESTTCCS
T ss_pred ------CCHHHHHHHHHHHHhcC------CCEEE--CCC--------------CcccHHHHHHHHHhCCCCEEEeCCcCC
Confidence 24567889999999999 88887 541 1223456678999999999999988 8
Q ss_pred HHHHHHHHHcCCCcEEEechHHh
Q 025135 184 RELGIQALAEDGADLVAYGRLFI 206 (257)
Q Consensus 184 ~~~a~~~l~~g~~D~V~igR~~i 206 (257)
++++.++++.+.+|+|.+--..+
T Consensus 255 ~~~~~~~~~~~~~d~v~~k~~~~ 277 (385)
T 3i6e_A 255 PEDMVRAAHEGICDGVSIKIMKS 277 (385)
T ss_dssp HHHHHHHHHHTCCSEEEECHHHH
T ss_pred HHHHHHHHHcCCCCEEEeccccc
Confidence 99999999999999998765444
No 130
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=98.72 E-value=9.3e-08 Score=81.91 Aligned_cols=86 Identities=14% Similarity=0.058 Sum_probs=62.8
Q ss_pred HHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHHHcC
Q 025135 116 GLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQALAED 194 (257)
Q Consensus 116 ~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~~g 194 (257)
..++++.+++.| ++.|.++....... .....+..++++++.+++||++.||+ +++++.++++.+
T Consensus 148 ~~e~~~~~~~~G------~~~i~~~~~~~~~~---------~~g~~~~~~~~i~~~~~ipvia~GGI~~~~d~~~~~~~~ 212 (244)
T 1vzw_A 148 LYETLDRLNKEG------CARYVVTDIAKDGT---------LQGPNLELLKNVCAATDRPVVASGGVSSLDDLRAIAGLV 212 (244)
T ss_dssp HHHHHHHHHHTT------CCCEEEEEC----------------CCCHHHHHHHHHTCSSCEEEESCCCSHHHHHHHHTTG
T ss_pred HHHHHHHHHhCC------CCEEEEeccCcccc---------cCCCCHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHhhc
Confidence 456778888899 77766654221110 01123567788888889999999999 689999999883
Q ss_pred --CCcEEEechHHhhCchHHHHHH
Q 025135 195 --GADLVAYGRLFISNPDLVLRFK 216 (257)
Q Consensus 195 --~~D~V~igR~~iadP~l~~k~~ 216 (257)
++|.|++||+++.+|+-+.+++
T Consensus 213 ~~Gadgv~vG~al~~~~~~~~~~~ 236 (244)
T 1vzw_A 213 PAGVEGAIVGKALYAKAFTLEEAL 236 (244)
T ss_dssp GGTEEEEEECHHHHTTSSCHHHHH
T ss_pred cCCCceeeeeHHHHcCCCCHHHHH
Confidence 4999999999999997666554
No 131
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=98.72 E-value=1.5e-07 Score=86.37 Aligned_cols=119 Identities=13% Similarity=0.039 Sum_probs=90.9
Q ss_pred HHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCCCCCCCCCCc
Q 025135 34 AIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAIDHLDATDSDP 112 (257)
Q Consensus 34 a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~~~~~~~~~~ 112 (257)
..+.||..++|..|.. + ..--.++|++||+++|++ .|.+..+. . .+
T Consensus 160 ~~~~G~~~~KiKvg~~--------------------~----~~~d~~~v~avR~a~g~~~~l~vDaN~--~-------~~ 206 (382)
T 3dgb_A 160 LDLRRHRIFKLKIGAG--------------------E----VDRDLAHVIAIKKALGDSASVRVDVNQ--A-------WD 206 (382)
T ss_dssp HHTTSCSEEEEECCSS--------------------C----HHHHHHHHHHHHHHHGGGSEEEEECTT--C-------BC
T ss_pred HHhCCCCEEEEeeCCC--------------------C----HHHHHHHHHHHHHHcCCCCeEEEeCCC--C-------CC
Confidence 3347999999987641 1 223567899999999976 57666653 2 35
Q ss_pred HHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHH
Q 025135 113 LGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQAL 191 (257)
Q Consensus 113 ~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l 191 (257)
.+++.++++.|++.+ +.||+ +|. .+.....++.+++.+++||++.+.+ +++++.+++
T Consensus 207 ~~~A~~~~~~l~~~~------i~~iE--qP~--------------~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~ 264 (382)
T 3dgb_A 207 EAVALRACRILGGNG------IDLIE--QPI--------------SRNNRAGMVRLNASSPAPIMADESIECVEDAFNLA 264 (382)
T ss_dssp HHHHHHHHHHHHTTT------CCCEE--CCB--------------CTTCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHH
T ss_pred HHHHHHHHHHHhhcC------cCeee--CCC--------------CccCHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHH
Confidence 788999999999999 88887 541 1223456678999999999999888 899999999
Q ss_pred HcCCCcEEEechHHhh
Q 025135 192 AEDGADLVAYGRLFIS 207 (257)
Q Consensus 192 ~~g~~D~V~igR~~ia 207 (257)
+.+.+|+|.+--..+.
T Consensus 265 ~~~~~d~v~~k~~~~G 280 (382)
T 3dgb_A 265 REGAASVFALKIAKNG 280 (382)
T ss_dssp HHTCCSEEEECHHHHT
T ss_pred HcCCCCEEEecccccC
Confidence 9999999998655443
No 132
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=98.71 E-value=3.7e-08 Score=94.61 Aligned_cols=86 Identities=14% Similarity=0.038 Sum_probs=68.8
Q ss_pred HHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHHHcC
Q 025135 116 GLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQALAED 194 (257)
Q Consensus 116 ~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~~g 194 (257)
..++++.++++| ++.|-++....++.. .+ ..++.++.+++.+++|||++||+ +++++.++++..
T Consensus 454 ~~e~a~~~~~~G------a~~il~t~~~~dG~~-------~G--~d~~li~~l~~~~~iPVIasGGi~s~~d~~~~~~~~ 518 (555)
T 1jvn_A 454 VWELTRACEALG------AGEILLNCIDKDGSN-------SG--YDLELIEHVKDAVKIPVIASSGAGVPEHFEEAFLKT 518 (555)
T ss_dssp HHHHHHHHHHTT------CCEEEECCGGGTTTC-------SC--CCHHHHHHHHHHCSSCEEECSCCCSHHHHHHHHHHS
T ss_pred HHHHHHHHHHcC------CCEEEEeCCCCCCCC-------CC--CCHHHHHHHHHhCCccEEEECCCCCHHHHHHHHHhc
Confidence 467899999999 888877653322211 11 23577888999999999999999 999999999855
Q ss_pred CCcEEEechHHhhCchHHHHHH
Q 025135 195 GADLVAYGRLFISNPDLVLRFK 216 (257)
Q Consensus 195 ~~D~V~igR~~iadP~l~~k~~ 216 (257)
+||.|++||++..+|+.+.+++
T Consensus 519 G~~gvivg~a~~~~~~~~~e~~ 540 (555)
T 1jvn_A 519 RADACLGAGMFHRGEFTVNDVK 540 (555)
T ss_dssp CCSEEEESHHHHTTSCCHHHHH
T ss_pred CChHHHHHHHHHcCCCCHHHHH
Confidence 6999999999999998887765
No 133
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=98.69 E-value=1.2e-07 Score=86.53 Aligned_cols=145 Identities=14% Similarity=0.061 Sum_probs=91.0
Q ss_pred HHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCC
Q 025135 29 QAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDAT 108 (257)
Q Consensus 29 ~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~ 108 (257)
++.+.+..+|+|+++||.-. ++...+|. |. ...+-.++.|+.+|+.++. ||.+|.-.+ .
T Consensus 159 ~~~~~ve~~~adal~ihln~---~qe~~~p~---------Gd--~~~~~~~~~I~~l~~~~~~-PVivK~vg~---g--- 217 (365)
T 3sr7_A 159 AGLQAVRDLQPLFLQVHINL---MQELLMPE---------GE--REFRSWKKHLSDYAKKLQL-PFILKEVGF---G--- 217 (365)
T ss_dssp HHHHHHHHHCCSCEEEEECH---HHHHTSSS---------SC--CCCHHHHHHHHHHHHHCCS-CEEEEECSS---C---
T ss_pred HHHHHHHhcCCCEEEEeccc---cccccCCC---------CC--CcHHHHHHHHHHHHHhhCC-CEEEEECCC---C---
Confidence 34444557899999999774 34555553 11 1133467899999998854 899995422 1
Q ss_pred CCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCC--c-----CCCCCCCchhHHHHHHHHHHHh-CCcEEEeC
Q 025135 109 DSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQ--T-----ESGRPGTEDEEAQLLRTWRRSY-QGTFICSG 180 (257)
Q Consensus 109 ~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~--~-----~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~G 180 (257)
.+. +.++.+.++| +|+|.++...-..... . ..............+..++... ++|||+.|
T Consensus 218 --~s~----e~A~~l~~aG------ad~I~V~g~GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L~~v~~~~~~ipvia~G 285 (365)
T 3sr7_A 218 --MDV----KTIQTAIDLG------VKTVDISGRGGTSFAYIENRRGGNRSYLNQWGQTTAQVLLNAQPLMDKVEILASG 285 (365)
T ss_dssp --CCH----HHHHHHHHHT------CCEEECCCBC--------------CGGGTTCSCBHHHHHHHHGGGTTTSEEEECS
T ss_pred --CCH----HHHHHHHHcC------CCEEEEeCCCCcccchhhccccccccccccccccHHHHHHHHHHhcCCCeEEEeC
Confidence 233 3577888999 8999886432111100 0 0000000111223444443322 68999999
Q ss_pred CC-CHHHHHHHHHcCCCcEEEechHHhh
Q 025135 181 GF-TRELGIQALAEDGADLVAYGRLFIS 207 (257)
Q Consensus 181 ~i-t~~~a~~~l~~g~~D~V~igR~~ia 207 (257)
|| +..++.++|.-| ||+|++||+++.
T Consensus 286 GI~~g~Dv~KaLalG-AdaV~ig~~~l~ 312 (365)
T 3sr7_A 286 GIRHPLDIIKALVLG-AKAVGLSRTMLE 312 (365)
T ss_dssp SCCSHHHHHHHHHHT-CSEEEESHHHHH
T ss_pred CCCCHHHHHHHHHcC-CCEEEECHHHHH
Confidence 99 999999999988 999999999984
No 134
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=98.67 E-value=3.3e-07 Score=84.13 Aligned_cols=130 Identities=14% Similarity=0.072 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCC
Q 025135 25 DQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAID 103 (257)
Q Consensus 25 ~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~ 103 (257)
+++++.|+.+.+.||..+.|+.|+ +. . .++ ..--.++|++||+++|++ .|.+..+..
T Consensus 147 e~~~~~a~~~~~~G~~~~K~Kvg~---------~~------~-~~~----~~~d~~~v~avR~a~G~~~~L~vDaN~~-- 204 (386)
T 3fv9_G 147 EAMRAKVARHRAQGFKGHSIKIGA---------SE------A-EGG----PALDAERITACLADRQPGEWYLADANNG-- 204 (386)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCC---------CT------T-TTH----HHHHHHHHHHHTTTCCTTCEEEEECTTC--
T ss_pred HHHHHHHHHHHHCCCCEEEEeccC---------CC------C-CCC----HHHHHHHHHHHHHHcCCCCeEEEECCCC--
Confidence 556677777889999999999876 11 1 122 344678899999999987 677777632
Q ss_pred CCCCCCCCcHHHHHHHHHHH-HhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC
Q 025135 104 HLDATDSDPLGLGLAVIQGL-NKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF 182 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~L-~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i 182 (257)
.+.+++.++++.| ++.+ + ||+ +|- . .....+.+++.+++||++.+.+
T Consensus 205 -------~~~~~A~~~~~~l~~~~~------i-~iE--eP~--------------~--~~~~~~~l~~~~~iPIa~dE~~ 252 (386)
T 3fv9_G 205 -------LTVEHALRMLSLLPPGLD------I-VLE--APC--------------A--SWAETKSLRARCALPLLLDELI 252 (386)
T ss_dssp -------CCHHHHHHHHHHSCSSCC------C-EEE--CCC--------------S--SHHHHHHHHTTCCSCEEESTTC
T ss_pred -------CCHHHHHHHHHHhhccCC------c-EEe--cCC--------------C--CHHHHHHHHhhCCCCEEeCCCc
Confidence 3578899999999 7766 7 876 541 1 2345677899999999999888
Q ss_pred -CHHHHHHHHHcCCCcEEEechHHhhC
Q 025135 183 -TRELGIQALAEDGADLVAYGRLFISN 208 (257)
Q Consensus 183 -t~~~a~~~l~~g~~D~V~igR~~iad 208 (257)
+++++.++++.+.+|+|.+--..+.-
T Consensus 253 ~~~~~~~~~~~~~a~d~v~~k~~~~GG 279 (386)
T 3fv9_G 253 QTETDLIAAIRDDLCDGVGLKVSKQGG 279 (386)
T ss_dssp CSHHHHHHHHHTTCCSEEEEEHHHHTS
T ss_pred CCHHHHHHHHHhCCCCEEEECccccCC
Confidence 89999999999999999986555433
No 135
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=98.66 E-value=3.1e-07 Score=84.14 Aligned_cols=119 Identities=12% Similarity=0.119 Sum_probs=88.3
Q ss_pred HcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCCCCCCCCCCcHH
Q 025135 36 QAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAIDHLDATDSDPLG 114 (257)
Q Consensus 36 ~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~~~~~~~~~~~~ 114 (257)
+.||..++|+.|.. + .+--.+.|++||+++|++ .|.+..+. . .+.+
T Consensus 161 ~~G~~~~KiKvg~~--------------------~----~~~d~~~v~avR~a~g~~~~l~vDaN~--~-------~~~~ 207 (381)
T 3fcp_A 161 EGRHRAFKLKIGAR--------------------E----LATDLRHTRAIVEALGDRASIRVDVNQ--A-------WDAA 207 (381)
T ss_dssp ----CEEEEECCSS--------------------C----HHHHHHHHHHHHHHTCTTCEEEEECTT--C-------BCHH
T ss_pred hCCCCEEEEecCCC--------------------C----hHHHHHHHHHHHHHcCCCCeEEEECCC--C-------CCHH
Confidence 46999999987641 1 234567899999999986 56666653 2 3578
Q ss_pred HHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHHHc
Q 025135 115 LGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQALAE 193 (257)
Q Consensus 115 ~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~~ 193 (257)
++.++++.|++.+ +.||+ +|. .+.....++.+++.+++||++...+ +++++.++++.
T Consensus 208 ~A~~~~~~l~~~~------i~~iE--eP~--------------~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~ 265 (381)
T 3fcp_A 208 TGAKGCRELAAMG------VDLIE--QPV--------------SAHDNAALVRLSQQIETAILADEAVATAYDGYQLAQQ 265 (381)
T ss_dssp HHHHHHHHHHHTT------CSEEE--CCB--------------CTTCHHHHHHHHHHSSSEEEESTTCCSHHHHHHHHHT
T ss_pred HHHHHHHHHhhcC------cccee--CCC--------------CcccHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHc
Confidence 8999999999999 88887 551 1223456678999999999998888 89999999999
Q ss_pred CCCcEEEechHHhhCc
Q 025135 194 DGADLVAYGRLFISNP 209 (257)
Q Consensus 194 g~~D~V~igR~~iadP 209 (257)
+.+|+|.+--..+.-.
T Consensus 266 ~a~d~v~~k~~~~GGi 281 (381)
T 3fcp_A 266 GFTGAYALKIAKAGGP 281 (381)
T ss_dssp TCCSEEEECHHHHTST
T ss_pred CCCCEEEecccccCCH
Confidence 9999999865555433
No 136
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=98.65 E-value=6.4e-07 Score=81.58 Aligned_cols=124 Identities=11% Similarity=0.050 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAID 103 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~ 103 (257)
.+++++.|+.+.+.||..|+|+.|.. + .+--.+.|++||+++++..|.+..+. .
T Consensus 144 ~e~~~~~a~~~~~~G~~~iK~Kvg~~--------------------~----~~~d~~~v~avr~~~~~~~l~vDaN~--~ 197 (365)
T 3ik4_A 144 EVHAAASAKAILARGIKSIKVKTAGV--------------------D----VAYDLARLRAIHQAAPTAPLIVDGNC--G 197 (365)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEECCSS--------------------C----HHHHHHHHHHHHHHSSSCCEEEECTT--C
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeCCC--------------------C----HHHHHHHHHHHHHhCCCCeEEEECCC--C
Confidence 35566777778889999999997651 1 33466789999999965345444432 2
Q ss_pred CCCCCCCCcHHHHHHHHHHH--HhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCC
Q 025135 104 HLDATDSDPLGLGLAVIQGL--NKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGG 181 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~L--~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~ 181 (257)
.+.+++.++++.| ++.+ +.||+ +|- .+.....++.+++..++||++...
T Consensus 198 -------~~~~~A~~~~~~L~~~~~~------i~~iE--eP~--------------~~~d~~~~~~l~~~~~ipIa~dE~ 248 (365)
T 3ik4_A 198 -------YDVERALAFCAACKAESIP------MVLFE--QPL--------------PREDWAGMAQVTAQSGFAVAADES 248 (365)
T ss_dssp -------CCHHHHHHHHHHHHHTTCC------EEEEE--CCS--------------CTTCHHHHHHHHHHSSSCEEESTT
T ss_pred -------CCHHHHHHHHHHHhhCCCC------ceEEE--CCC--------------CcccHHHHHHHHhhCCCCEEECCC
Confidence 3578899999999 7777 88887 551 122345667899999999999888
Q ss_pred C-CHHHHHHHHHcCCCcEEEec
Q 025135 182 F-TRELGIQALAEDGADLVAYG 202 (257)
Q Consensus 182 i-t~~~a~~~l~~g~~D~V~ig 202 (257)
+ +++++.++++.+.+|+|.+=
T Consensus 249 ~~~~~~~~~~i~~~a~d~v~ik 270 (365)
T 3ik4_A 249 ARSAHDVLRIAREGTASVINIK 270 (365)
T ss_dssp CSSHHHHHHHHHHTCCSEEEEC
T ss_pred CCCHHHHHHHHHhCCCCEEEEc
Confidence 8 89999999999999999764
No 137
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=98.64 E-value=4.9e-07 Score=83.18 Aligned_cols=126 Identities=17% Similarity=0.134 Sum_probs=97.5
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhC-CC-eEEEEEccC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIG-AD-RVGVRMSPA 101 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg-~~-~v~vrls~~ 101 (257)
.+++++.|+.+.+.||..++|+.|+. + ..--.+.|++||+++| ++ .|.+..+.
T Consensus 165 ~e~~~~~a~~~~~~G~~~~KlKvg~~--------------------~----~~~d~~~v~avR~a~gg~~~~L~vDaN~- 219 (391)
T 4e8g_A 165 PDEIARIAAEKVAEGFPRLQIKIGGR--------------------P----VEIDIETVRKVWERIRGTGTRLAVDGNR- 219 (391)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCSS--------------------C----HHHHHHHHHHHHHHHTTTTCEEEEECTT-
T ss_pred HHHHHHHHHHHHHcCCcEEEEcCCCC--------------------C----HHHHHHHHHHHHHHhCCCCCeEEEeCCC-
Confidence 35566777778889999999987751 1 2235678999999998 76 57776663
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCC
Q 025135 102 IDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGG 181 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~ 181 (257)
. .+.+++.++++.|++.+ + |++ +|. .....++.+++.+++||++...
T Consensus 220 -~-------w~~~~A~~~~~~L~~~~------i-~iE--eP~----------------~~~~~~~~l~~~~~iPIa~dE~ 266 (391)
T 4e8g_A 220 -S-------LPSRDALRLSRECPEIP------F-VLE--QPC----------------NTLEEIAAIRGRVQHGIYLDES 266 (391)
T ss_dssp -C-------CCHHHHHHHHHHCTTSC------E-EEE--SCS----------------SSHHHHHHHGGGCCSCEEESTT
T ss_pred -C-------CCHHHHHHHHHHHhhcC------e-EEe--cCC----------------ccHHHHHHHHhhCCCCEEeCCC
Confidence 2 35788999999999998 8 886 551 0134567789999999999888
Q ss_pred C-CHHHHHHHHHcCCCcEEEechHHhh
Q 025135 182 F-TRELGIQALAEDGADLVAYGRLFIS 207 (257)
Q Consensus 182 i-t~~~a~~~l~~g~~D~V~igR~~ia 207 (257)
+ +++++.++++.+.+|+|.+--..+.
T Consensus 267 ~~~~~~~~~~~~~~a~d~v~ik~~~~G 293 (391)
T 4e8g_A 267 GEDLSTVIRAAGQGLCDGFGMKLTRIG 293 (391)
T ss_dssp CCSHHHHHHHHHTTCCSEEEEEHHHHT
T ss_pred CCCHHHHHHHHHcCCCCEEEeCccccC
Confidence 8 8999999999999999998665553
No 138
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=98.64 E-value=6.4e-07 Score=82.57 Aligned_cols=126 Identities=14% Similarity=0.133 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHHHc-CCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccC
Q 025135 24 IDQYRQAALNAIQA-GFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPA 101 (257)
Q Consensus 24 i~~f~~AA~~a~~a-GfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~ 101 (257)
.+++++.|+.+.+. ||..++|+.|. ++ .--.++|++||+++ ++ .|.+..+.
T Consensus 169 ~e~~~~~a~~~~~~~G~~~~K~KvG~---------------------~~----~~d~~~v~avR~~~-~~~~l~vDaN~- 221 (398)
T 4dye_A 169 PKAMAEHAVRVVEEGGFDAVKLKGTT---------------------DC----AGDVAILRAVREAL-PGVNLRVDPNA- 221 (398)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEECCS---------------------CH----HHHHHHHHHHHHHC-TTSEEEEECTT-
T ss_pred HHHHHHHHHHHHHhcCCCEEEEecCC---------------------CH----HHHHHHHHHHHHhC-CCCeEEeeCCC-
Confidence 46777888888888 99999998652 11 23468899999999 65 67776653
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCC
Q 025135 102 IDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGG 181 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~ 181 (257)
. .+.+++.++++.|++.+ +.||+ +|- . ....++.+++.+++||++.+.
T Consensus 222 -~-------w~~~~A~~~~~~l~~~~------i~~iE--qP~--------------~--d~~~~~~l~~~~~iPIa~dE~ 269 (398)
T 4dye_A 222 -A-------WSVPDSVRAGIALEELD------LEYLE--DPC--------------V--GIEGMAQVKAKVRIPLCTNMC 269 (398)
T ss_dssp -C-------SCHHHHHHHHHHHGGGC------CSEEE--CCS--------------S--HHHHHHHHHHHCCSCEEESSS
T ss_pred -C-------CCHHHHHHHHHHHhhcC------CCEEc--CCC--------------C--CHHHHHHHHhhCCCCEEeCCc
Confidence 2 35788999999999999 88987 541 1 345667899999999999888
Q ss_pred C-CHHHHHHHHHcCCCcEEEechHHhhC
Q 025135 182 F-TRELGIQALAEDGADLVAYGRLFISN 208 (257)
Q Consensus 182 i-t~~~a~~~l~~g~~D~V~igR~~iad 208 (257)
+ +++++.++++.+.+|+|.+--..+.=
T Consensus 270 ~~~~~~~~~~i~~~a~d~v~~k~~~~GG 297 (398)
T 4dye_A 270 VVRFEDFAPAMRLNAVDVIHGDVYKWGG 297 (398)
T ss_dssp CCSGGGHHHHHHTTCCSEEEECHHHHTS
T ss_pred CCCHHHHHHHHHhCCCCEEEeCccccCC
Confidence 8 89999999999999999986655543
No 139
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=98.63 E-value=6.2e-07 Score=81.85 Aligned_cols=120 Identities=15% Similarity=0.162 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCCC
Q 025135 26 QYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAIDH 104 (257)
Q Consensus 26 ~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~~ 104 (257)
+.++.++...+.||..+.++.|.+ + +--.+.|++||+++|++ .|.+..+. .
T Consensus 147 ~~~~~~~~~~~~Gf~~~K~k~g~~---------------------~----~~di~~v~avr~~~g~~~~l~vDaN~--~- 198 (378)
T 4hpn_A 147 DNASEMAERRAEGFHACKIKIGFG---------------------V----EEDLRVIAAVREAIGPDMRLMIDANH--G- 198 (378)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCSC---------------------H----HHHHHHHHHHHHHHTTTSEEEEECTT--C-
T ss_pred HHHHHHHHHHHhccceecccccCC---------------------h----HHHHHHHHHHHHhcCCcEEEEEecCc--c-
Confidence 344555566788999999987641 1 23457899999999986 56655553 2
Q ss_pred CCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-C
Q 025135 105 LDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-T 183 (257)
Q Consensus 105 ~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t 183 (257)
.+.++++++++.|++.+ +.|++ +|- .+.....++.+++..++||.+...+ +
T Consensus 199 ------~~~~~A~~~~~~l~~~~------i~~iE--eP~--------------~~~d~~~~~~l~~~~~ipIa~dE~~~~ 250 (378)
T 4hpn_A 199 ------YTVTEAITLGDRAAGFG------IDWFE--EPV--------------VPEQLDAYARVRAGQPIPVAGGETWHG 250 (378)
T ss_dssp ------CCHHHHHHHHHHHGGGC------CSCEE--CCS--------------CTTCHHHHHHHHHHSSSCEEECTTCCH
T ss_pred ------cCHHHHHHHHhhhhhcc------cchhh--cCC--------------CccchhhhHHHHhhCCceeeCCcCccc
Confidence 35788999999999999 88887 552 2223456678999999999988887 8
Q ss_pred HHHHHHHHHcCCCcEEEe
Q 025135 184 RELGIQALAEDGADLVAY 201 (257)
Q Consensus 184 ~~~a~~~l~~g~~D~V~i 201 (257)
.+++.++++.+.+|+|.+
T Consensus 251 ~~~~~~~i~~~a~d~i~~ 268 (378)
T 4hpn_A 251 RYGMWQALSAGAVDILQP 268 (378)
T ss_dssp HHHHHHHHHTTCCSEECC
T ss_pred hHhHHHHHHcCCCCEEee
Confidence 999999999999999975
No 140
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=98.62 E-value=6e-07 Score=80.60 Aligned_cols=121 Identities=15% Similarity=0.122 Sum_probs=85.5
Q ss_pred HHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCC
Q 025135 28 RQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDA 107 (257)
Q Consensus 28 ~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~ 107 (257)
.+.+..+.++|.|.|.+|+++ | .++++.+++. |. +|++.++
T Consensus 92 ~~~~~~~~~~g~d~V~l~~g~---------p--------------------~~~~~~l~~~-g~-~v~~~v~-------- 132 (326)
T 3bo9_A 92 DDLVKVCIEEKVPVVTFGAGN---------P--------------------TKYIRELKEN-GT-KVIPVVA-------- 132 (326)
T ss_dssp HHHHHHHHHTTCSEEEEESSC---------C--------------------HHHHHHHHHT-TC-EEEEEES--------
T ss_pred HHHHHHHHHCCCCEEEECCCC---------c--------------------HHHHHHHHHc-CC-cEEEEcC--------
Confidence 455667778999999998765 2 1345666653 32 6666664
Q ss_pred CCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHH
Q 025135 108 TDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TREL 186 (257)
Q Consensus 108 ~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~ 186 (257)
+.+ .++.+.+.| +|+|.++.+..... . +....+..+..+++.+++|||+.||| ++++
T Consensus 133 ----s~~----~a~~a~~~G------aD~i~v~g~~~GG~----~----G~~~~~~ll~~i~~~~~iPviaaGGI~~~~d 190 (326)
T 3bo9_A 133 ----SDS----LARMVERAG------ADAVIAEGMESGGH----I----GEVTTFVLVNKVSRSVNIPVIAAGGIADGRG 190 (326)
T ss_dssp ----SHH----HHHHHHHTT------CSCEEEECTTSSEE----C----CSSCHHHHHHHHHHHCSSCEEEESSCCSHHH
T ss_pred ----CHH----HHHHHHHcC------CCEEEEECCCCCcc----C----CCccHHHHHHHHHHHcCCCEEEECCCCCHHH
Confidence 233 356677889 88888865422111 0 11223467778888889999999999 6999
Q ss_pred HHHHHHcCCCcEEEechHHhhCch
Q 025135 187 GIQALAEDGADLVAYGRLFISNPD 210 (257)
Q Consensus 187 a~~~l~~g~~D~V~igR~~iadP~ 210 (257)
+.+++..| +|+|++|++++..++
T Consensus 191 v~~al~~G-A~gV~vGs~~~~~~e 213 (326)
T 3bo9_A 191 MAAAFALG-AEAVQMGTRFVASVE 213 (326)
T ss_dssp HHHHHHHT-CSEEEESHHHHTBSS
T ss_pred HHHHHHhC-CCEEEechHHHcCcc
Confidence 99999987 999999999997764
No 141
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=98.59 E-value=1.1e-06 Score=81.24 Aligned_cols=121 Identities=14% Similarity=0.129 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCC
Q 025135 25 DQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAID 103 (257)
Q Consensus 25 ~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~ 103 (257)
++.++.|+..++.||..+.|+.+.+- | -..+.+++||+++|++ .|.+-.+. .
T Consensus 190 ~~~~~~a~~~~~~G~~~~K~k~g~~~--------------~-----------~~~~~v~~vR~~~g~~~~l~vDaN~--~ 242 (412)
T 4h1z_A 190 AKRAELAAAWQAKGFSSFKFASPVAD--------------D-----------GVAKEMEILRERLGPAVRIACDMHW--A 242 (412)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEGGGCT--------------T-----------CHHHHHHHHHHHHCSSSEEEEECCS--C
T ss_pred HHHHHHHHHHHhcCcceeccccccch--------------h-----------hHHHHHHHHHhccCCeEEEEecccc--C
Confidence 44566677778899999999866410 0 1345578999999986 46555543 2
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-
Q 025135 104 HLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF- 182 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i- 182 (257)
.+.++++++++.|++.+ +.|++ +|- .+.....++++++.+++||.+...+
T Consensus 243 -------~~~~~A~~~~~~l~~~~------l~~iE--qP~--------------~~~d~~~~~~l~~~~~iPIa~dE~~~ 293 (412)
T 4h1z_A 243 -------HTASEAVALIKAMEPHG------LWFAE--APV--------------RTEDIDGLARVAASVSTAIAVGEEWR 293 (412)
T ss_dssp -------CCHHHHHHHHHHHGGGC------EEEEE--CCS--------------CTTCHHHHHHHHHHCSSEEEECTTCC
T ss_pred -------CCHHHHHHHHHhhcccc------cceec--CCC--------------CccchHHHHHHHhhcCCccccCCccc
Confidence 35788999999999999 88887 551 2223456778999999999988888
Q ss_pred CHHHHHHHHHcCCCcEEEe
Q 025135 183 TRELGIQALAEDGADLVAY 201 (257)
Q Consensus 183 t~~~a~~~l~~g~~D~V~i 201 (257)
+.+++.++++.+.+|+|.+
T Consensus 294 ~~~~~~~~i~~~a~div~~ 312 (412)
T 4h1z_A 294 TVHDMVPRVARRALAIVQP 312 (412)
T ss_dssp SHHHHHHHHHTTCCSEECC
T ss_pred chHhHHHHHHcCCCCEEEe
Confidence 9999999999999999874
No 142
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=98.57 E-value=1.4e-06 Score=79.96 Aligned_cols=123 Identities=15% Similarity=0.099 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCC
Q 025135 25 DQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDH 104 (257)
Q Consensus 25 ~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~ 104 (257)
+++++.|+.+.+.||..|.|..|.. + .+--.+.|++||+++|+..|.+..|. .
T Consensus 146 e~~~~~a~~~~~~G~~~iKlKvg~~--------------------~----~~~d~~~v~avR~~~~~~~L~vDaN~--~- 198 (389)
T 3s5s_A 146 ERAEEAARRAAAMGFRALKVKVGGR--------------------L----AASDPARIEAIHAAAPGASLILDGNG--G- 198 (389)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCGG--------------------G----TTTHHHHHHHHHHHCTTCEEEEECTT--C-
T ss_pred HHHHHHHHHHHHcCCCeEEEEecCC--------------------C----hHHHHHHHHHHHHhCCCCeEEEECCC--C-
Confidence 4556667777889999999987641 0 22346779999999975344444432 2
Q ss_pred CCCCCCCcHHHHHHHHHHH--HhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC
Q 025135 105 LDATDSDPLGLGLAVIQGL--NKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF 182 (257)
Q Consensus 105 ~~~~~~~~~~~~~~l~~~L--~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i 182 (257)
.+.++++++++.| ++.+ +.||+ +|- .+.....++.+++..++||.+...+
T Consensus 199 ------w~~~~A~~~~~~L~~~~~~------i~~iE--eP~--------------~~~d~~~~~~l~~~~~iPIa~dEs~ 250 (389)
T 3s5s_A 199 ------LTAGEALALVAHARRLGAD------VALLE--QPV--------------PRDDWDGMKEVTRRAGVDVAADESA 250 (389)
T ss_dssp ------SCHHHHHHHHHHHHHTTCE------EEEEE--CCS--------------CTTCHHHHHHHHHHSSSCEEESTTC
T ss_pred ------CCHHHHHHHHHHHhhCCCC------eEEEE--CCC--------------CcccHHHHHHHHhhCCCCEEECCCC
Confidence 3578899999999 7777 88887 652 2223456677899999999998888
Q ss_pred -CHHHHHHHHHcCCCcEEEec
Q 025135 183 -TRELGIQALAEDGADLVAYG 202 (257)
Q Consensus 183 -t~~~a~~~l~~g~~D~V~ig 202 (257)
+++++.++++.+.+|+|.+=
T Consensus 251 ~~~~~~~~~i~~~a~d~v~~k 271 (389)
T 3s5s_A 251 ASAEDVLRVAAERAATVVNIK 271 (389)
T ss_dssp SSHHHHHHHHHTTCCSEEEEC
T ss_pred CCHHHHHHHHHcCCCCEEEec
Confidence 89999999999999999763
No 143
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=98.57 E-value=1.6e-06 Score=77.91 Aligned_cols=122 Identities=8% Similarity=0.023 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCC
Q 025135 25 DQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAID 103 (257)
Q Consensus 25 ~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~ 103 (257)
+++++.|+.+.+.||..++|..|. .+ .+--.+.|++||+++|++ .|.+..+. .
T Consensus 118 e~~~~~a~~~~~~G~~~~KiKvg~--------------------~~----~~~d~~~v~avr~~~g~~~~L~vDaN~--~ 171 (332)
T 2ozt_A 118 QAALEQWQQSWQRGQTTFKWKVGV--------------------MS----PEEEQAILKALLAALPPGAKLRLDANG--S 171 (332)
T ss_dssp GGHHHHHHHHHHTTCCEEEEECSS--------------------SC----HHHHHHHHHHHHHHSCTTCEEEEECTT--C
T ss_pred HHHHHHHHHHHHcCCcEEEEEeCC--------------------CC----hHHHHHHHHHHHHHcCCCCEEEEcccC--C
Confidence 345666777778999999998653 01 234568899999999986 45544442 1
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhc---CCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeC
Q 025135 104 HLDATDSDPLGLGLAVIQGLNKL---QIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSG 180 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~L~~~---G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G 180 (257)
.+.++++++++.|++. + +.||+ +|- .+.....++.+++..++||++..
T Consensus 172 -------~~~~~A~~~~~~l~~~~~~~------i~~iE--qP~--------------~~~d~~~~~~l~~~~~ipIa~dE 222 (332)
T 2ozt_A 172 -------WDRATANRWFAWLDRHGNGK------IEYVE--QPL--------------PPDQWQALLSLAQTVTTAIALDE 222 (332)
T ss_dssp -------CCHHHHHHHHHHHHHHCCTT------EEEEE--CCS--------------CTTCHHHHHHHHHHCSSCEEEST
T ss_pred -------CCHHHHHHHHHHHHhhccCC------cceeE--CCC--------------CCCCHHHHHHHHHhCCCCEEeCC
Confidence 3578899999999998 8 88887 652 12234556778888999999988
Q ss_pred CC-CHHHHHHHHHcCCCcEEEe
Q 025135 181 GF-TRELGIQALAEDGADLVAY 201 (257)
Q Consensus 181 ~i-t~~~a~~~l~~g~~D~V~i 201 (257)
.+ +++++.++++.+.+|+|.+
T Consensus 223 s~~~~~~~~~~~~~~a~~~i~i 244 (332)
T 2ozt_A 223 SVVSAAEVQRWVDRGWPGFFVI 244 (332)
T ss_dssp TCCSHHHHHHHHHTTCCSEEEE
T ss_pred CCCCHHHHHHHHHhCCCCEEEE
Confidence 87 8999999999999998776
No 144
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=98.55 E-value=2e-07 Score=80.01 Aligned_cols=88 Identities=13% Similarity=0.058 Sum_probs=71.7
Q ss_pred HHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHHHc
Q 025135 115 LGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQALAE 193 (257)
Q Consensus 115 ~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~~ 193 (257)
+..++++.+++.| +++|+++.+..... ........++.+++.+++||+++|++ ++++++++++.
T Consensus 32 d~~~~a~~~~~~G------ad~i~v~d~~~~~~---------~~~~~~~~i~~i~~~~~iPvi~~Ggi~~~~~~~~~~~~ 96 (252)
T 1ka9_F 32 DPVEAARAYDEAG------ADELVFLDISATHE---------ERAILLDVVARVAERVFIPLTVGGGVRSLEDARKLLLS 96 (252)
T ss_dssp CHHHHHHHHHHHT------CSCEEEEECCSSTT---------CHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHH
T ss_pred CHHHHHHHHHHcC------CCEEEEEcCCcccc---------CccccHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHc
Confidence 3567899999999 88888875432110 23344567788999899999999999 89999999999
Q ss_pred CCCcEEEechHHhhCchHHHHHHcC
Q 025135 194 DGADLVAYGRLFISNPDLVLRFKLN 218 (257)
Q Consensus 194 g~~D~V~igR~~iadP~l~~k~~~g 218 (257)
| +|.|.+|+.++.+|++++++.+.
T Consensus 97 G-ad~V~lg~~~l~~p~~~~~~~~~ 120 (252)
T 1ka9_F 97 G-ADKVSVNSAAVRRPELIRELADH 120 (252)
T ss_dssp T-CSEEEECHHHHHCTHHHHHHHHH
T ss_pred C-CCEEEEChHHHhCcHHHHHHHHH
Confidence 8 99999999999999999988754
No 145
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=98.53 E-value=6.5e-07 Score=82.20 Aligned_cols=121 Identities=10% Similarity=0.092 Sum_probs=91.9
Q ss_pred HHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCCCC
Q 025135 27 YRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAIDHL 105 (257)
Q Consensus 27 f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~~~ 105 (257)
+++.++.+++.||..+.|+.+. .+++ --.+.|++||+++|++ .|.+..+. .
T Consensus 168 ~~~~~~~~~~~G~~~~Kikvg~--------------------~~~~----~d~~~v~avR~~~G~~~~l~vDaN~--~-- 219 (388)
T 4h83_A 168 IADEMHNYQELGLAGVKFKVGG--------------------LSAA----EDAARITAAREAAGDDFIICIDANQ--G-- 219 (388)
T ss_dssp HHHHHHHHHHHTBSEEEEECSS--------------------SCHH----HHHHHHHHHHHHHCSSSEEEEECTT--C--
T ss_pred HHHHHHHHHHcCCceEeecCCC--------------------CCHH----HHHHHHHHHHHhcCCCeEEEEecCc--C--
Confidence 4556677888999999998643 1222 2356799999999987 56666553 2
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CH
Q 025135 106 DATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TR 184 (257)
Q Consensus 106 ~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~ 184 (257)
.+.++++++++.|++.+ +.|++ +|-. .......++.+++..++||.+...+ ++
T Consensus 220 -----~~~~~A~~~~~~l~~~~------~~~iE--eP~~-------------~~~d~~~~~~l~~~~~ipIa~dE~~~~~ 273 (388)
T 4h83_A 220 -----YKPAVAVDLSRRIADLN------IRWFE--EPVE-------------WHNDKRSMRDVRYQGSVPVCAGQTEFSA 273 (388)
T ss_dssp -----BCHHHHHHHHHHTTTSC------CCCEE--SCBC-------------STTHHHHHHHHHHHSSSCEEECTTCSSH
T ss_pred -----CCHHHHHHHHHHhhhcC------cceee--cCcc-------------cccchHHHHHHHhhcCCCccCCccccCh
Confidence 35788999999999998 88887 5521 1123455678999999999988888 99
Q ss_pred HHHHHHHHcCCCcEEEe
Q 025135 185 ELGIQALAEDGADLVAY 201 (257)
Q Consensus 185 ~~a~~~l~~g~~D~V~i 201 (257)
+++.++++.+.+|+|.+
T Consensus 274 ~~~~~~i~~~a~d~i~~ 290 (388)
T 4h83_A 274 SGCRDLMETGAIDVCNF 290 (388)
T ss_dssp HHHHHHHHHTCCSEECC
T ss_pred HhHHHHHHcCCCCeEee
Confidence 99999999999999865
No 146
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=98.53 E-value=1.9e-06 Score=81.94 Aligned_cols=135 Identities=16% Similarity=0.109 Sum_probs=87.7
Q ss_pred HHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCC
Q 025135 28 RQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDA 107 (257)
Q Consensus 28 ~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~ 107 (257)
.+.+..+.++|.|.|.|+.+||. ..-+.+.|+.+|+..+.-+|.+.--
T Consensus 258 ~era~aLveaGvd~I~Id~a~g~------------------------~~~v~~~i~~i~~~~~~~~vi~g~v-------- 305 (511)
T 3usb_A 258 MTRIDALVKASVDAIVLDTAHGH------------------------SQGVIDKVKEVRAKYPSLNIIAGNV-------- 305 (511)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTT------------------------SHHHHHHHHHHHHHCTTSEEEEEEE--------
T ss_pred HHHHHHHHhhccceEEecccccc------------------------hhhhhhHHHHHHHhCCCceEEeeee--------
Confidence 45566678899999999988731 2357889999999986546554211
Q ss_pred CCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHH---HHHHhCCcEEEeCCC-C
Q 025135 108 TDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRT---WRRSYQGTFICSGGF-T 183 (257)
Q Consensus 108 ~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---ir~~~~~pvi~~G~i-t 183 (257)
.+. +.++.+.++| +|+|.+..+.-.........+. ..+. ...+.. ..+.+++|||+.||+ +
T Consensus 306 ---~t~----e~a~~~~~aG------ad~i~vg~g~gsi~~~~~~~g~-g~p~-~~~l~~v~~~~~~~~iPVIa~GGI~~ 370 (511)
T 3usb_A 306 ---ATA----EATKALIEAG------ANVVKVGIGPGSICTTRVVAGV-GVPQ-LTAVYDCATEARKHGIPVIADGGIKY 370 (511)
T ss_dssp ---CSH----HHHHHHHHHT------CSEEEECSSCSTTCCHHHHHCC-CCCH-HHHHHHHHHHHHTTTCCEEEESCCCS
T ss_pred ---ccH----HHHHHHHHhC------CCEEEECCCCccccccccccCC-CCCc-HHHHHHHHHHHHhCCCcEEEeCCCCC
Confidence 123 3467788899 8888762211000000000001 1121 233333 344457999999999 9
Q ss_pred HHHHHHHHHcCCCcEEEechHHhhCch
Q 025135 184 RELGIQALAEDGADLVAYGRLFISNPD 210 (257)
Q Consensus 184 ~~~a~~~l~~g~~D~V~igR~~iadP~ 210 (257)
+.++.++|..| ||+|++||+|+.-..
T Consensus 371 ~~di~kala~G-A~~V~vGs~~~~~~e 396 (511)
T 3usb_A 371 SGDMVKALAAG-AHVVMLGSMFAGVAE 396 (511)
T ss_dssp HHHHHHHHHTT-CSEEEESTTTTTBTT
T ss_pred HHHHHHHHHhC-chhheecHHHhcCcc
Confidence 99999999998 999999999976543
No 147
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=98.52 E-value=3.6e-07 Score=78.50 Aligned_cols=87 Identities=14% Similarity=0.167 Sum_probs=70.4
Q ss_pred HHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHHHcC
Q 025135 116 GLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQALAED 194 (257)
Q Consensus 116 ~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~~g 194 (257)
..++++.+++.| +++++++...... .........++.+++.+++||+++|++ ++++++++++.|
T Consensus 32 ~~~~a~~~~~~G------ad~i~v~d~~~~~---------~~~~~~~~~i~~i~~~~~ipvi~~ggI~~~~~~~~~~~~G 96 (253)
T 1thf_D 32 PVELGKFYSEIG------IDELVFLDITASV---------EKRKTMLELVEKVAEQIDIPFTVGGGIHDFETASELILRG 96 (253)
T ss_dssp HHHHHHHHHHTT------CCEEEEEESSCSS---------SHHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHTT
T ss_pred HHHHHHHHHHcC------CCEEEEECCchhh---------cCCcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcC
Confidence 467889999999 8999988642110 012344566788888889999999999 899999999987
Q ss_pred CCcEEEechHHhhCchHHHHHHcC
Q 025135 195 GADLVAYGRLFISNPDLVLRFKLN 218 (257)
Q Consensus 195 ~~D~V~igR~~iadP~l~~k~~~g 218 (257)
||.|.+|+.++.+|+++.++.+.
T Consensus 97 -ad~V~lg~~~l~~p~~~~~~~~~ 119 (253)
T 1thf_D 97 -ADKVSINTAAVENPSLITQIAQT 119 (253)
T ss_dssp -CSEEEESHHHHHCTHHHHHHHHH
T ss_pred -CCEEEEChHHHhChHHHHHHHHH
Confidence 99999999999999999888654
No 148
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=98.52 E-value=1.2e-06 Score=74.93 Aligned_cols=129 Identities=17% Similarity=0.148 Sum_probs=86.6
Q ss_pred HHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCC
Q 025135 29 QAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDAT 108 (257)
Q Consensus 29 ~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~ 108 (257)
+.+..+.++|.|.|-+.+++. + |...+.++++.+++. |- .+++.++
T Consensus 92 ~~i~~~~~aGad~I~l~~~~~------~-----------------~p~~l~~~i~~~~~~-g~-~v~~~v~--------- 137 (229)
T 3q58_A 92 QDVDALAQAGADIIAFDASFR------S-----------------RPVDIDSLLTRIRLH-GL-LAMADCS--------- 137 (229)
T ss_dssp HHHHHHHHHTCSEEEEECCSS------C-----------------CSSCHHHHHHHHHHT-TC-EEEEECS---------
T ss_pred HHHHHHHHcCCCEEEECcccc------C-----------------ChHHHHHHHHHHHHC-CC-EEEEecC---------
Confidence 345567889999999887761 1 112577888888874 32 5555443
Q ss_pred CCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHH
Q 025135 109 DSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELG 187 (257)
Q Consensus 109 ~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a 187 (257)
+.+ .++.+++.| +|+|-++...+..... ...+ ....++.+++. ++|||+.||+ |++++
T Consensus 138 ---t~e----ea~~a~~~G------ad~Ig~~~~g~t~~~~------~~~~-~~~li~~l~~~-~ipvIA~GGI~t~~d~ 196 (229)
T 3q58_A 138 ---TVN----EGISCHQKG------IEFIGTTLSGYTGPIT------PVEP-DLAMVTQLSHA-GCRVIAEGRYNTPALA 196 (229)
T ss_dssp ---SHH----HHHHHHHTT------CSEEECTTTTSSSSCC------CSSC-CHHHHHHHHTT-TCCEEEESSCCSHHHH
T ss_pred ---CHH----HHHHHHhCC------CCEEEecCccCCCCCc------CCCC-CHHHHHHHHHc-CCCEEEECCCCCHHHH
Confidence 233 356678899 8998543222221110 0112 23566778877 8999999999 89999
Q ss_pred HHHHHcCCCcEEEechHHhhCchHHHH
Q 025135 188 IQALAEDGADLVAYGRLFISNPDLVLR 214 (257)
Q Consensus 188 ~~~l~~g~~D~V~igR~~iadP~l~~k 214 (257)
.++++.| +|.|++|..+. +|+.+.+
T Consensus 197 ~~~~~~G-adgV~VGsai~-~p~~~~~ 221 (229)
T 3q58_A 197 ANAIEHG-AWAVTVGSAIT-RIEHICQ 221 (229)
T ss_dssp HHHHHTT-CSEEEECHHHH-CHHHHHH
T ss_pred HHHHHcC-CCEEEEchHhc-ChHHHHH
Confidence 9999997 99999997776 5765543
No 149
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=98.52 E-value=2.2e-06 Score=77.80 Aligned_cols=128 Identities=15% Similarity=0.176 Sum_probs=83.1
Q ss_pred HHHHHc--CCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCCC
Q 025135 32 LNAIQA--GFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDATD 109 (257)
Q Consensus 32 ~~a~~a--GfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~ 109 (257)
..+.++ |+|.|++|..+|+ ...+.+.|+.+|+.+++-+|.++--.
T Consensus 124 ~~l~~~~~g~~~i~i~~~~g~------------------------~~~~~~~i~~lr~~~~~~~vi~g~v~--------- 170 (351)
T 2c6q_A 124 EQILEAIPQVKYICLDVANGY------------------------SEHFVEFVKDVRKRFPQHTIMAGNVV--------- 170 (351)
T ss_dssp HHHHHHCTTCCEEEEECSCTT------------------------BHHHHHHHHHHHHHCTTSEEEEEEEC---------
T ss_pred HHHHhccCCCCEEEEEecCCC------------------------cHHHHHHHHHHHHhcCCCeEEEEeCC---------
Confidence 334455 9999999876531 13577899999999854477665321
Q ss_pred CCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCC-cccCCCcCCCCCCCchhHHHHHHHH---HHHhCCcEEEeCCC-CH
Q 025135 110 SDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPR-YTAYGQTESGRPGTEDEEAQLLRTW---RRSYQGTFICSGGF-TR 184 (257)
Q Consensus 110 ~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i---r~~~~~pvi~~G~i-t~ 184 (257)
+.+ .++.+.++| +|+|.++... .........+ . ..+ ....+..+ .+..++|||+.||| ++
T Consensus 171 --t~e----~A~~a~~aG------aD~I~v~~g~G~~~~~r~~~g-~-~~p-~~~~l~~v~~~~~~~~ipvIa~GGI~~g 235 (351)
T 2c6q_A 171 --TGE----MVEELILSG------ADIIKVGIGPGSVCTTRKKTG-V-GYP-QLSAVMECADAAHGLKGHIISDGGCSCP 235 (351)
T ss_dssp --SHH----HHHHHHHTT------CSEEEECSSCSTTBCHHHHHC-B-CCC-HHHHHHHHHHHHHHTTCEEEEESCCCSH
T ss_pred --CHH----HHHHHHHhC------CCEEEECCCCCcCcCccccCC-C-Ccc-HHHHHHHHHHHHhhcCCcEEEeCCCCCH
Confidence 233 467788999 8999875321 1000000000 0 011 12223333 34458999999999 89
Q ss_pred HHHHHHHHcCCCcEEEechHHhhC
Q 025135 185 ELGIQALAEDGADLVAYGRLFISN 208 (257)
Q Consensus 185 ~~a~~~l~~g~~D~V~igR~~iad 208 (257)
.++.++|.-| +|+|++||+|+.-
T Consensus 236 ~di~kAlalG-A~~V~vG~~fl~~ 258 (351)
T 2c6q_A 236 GDVAKAFGAG-ADFVMLGGMLAGH 258 (351)
T ss_dssp HHHHHHHHTT-CSEEEESTTTTTB
T ss_pred HHHHHHHHcC-CCceeccHHHhcC
Confidence 9999999998 9999999999974
No 150
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=98.52 E-value=9.4e-07 Score=73.61 Aligned_cols=47 Identities=13% Similarity=0.235 Sum_probs=40.7
Q ss_pred HHHHHHHHHh-CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCchH
Q 025135 163 QLLRTWRRSY-QGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNPDL 211 (257)
Q Consensus 163 ~~~~~ir~~~-~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP~l 211 (257)
..++.+++.+ ++||++.||++++++.++++.| +|+|++|+.++. +||
T Consensus 139 ~~~~~l~~~~~~~pvia~GGI~~~~~~~~~~~G-a~~v~vGs~i~~-~d~ 186 (205)
T 1wa3_A 139 QFVKAMKGPFPNVKFVPTGGVNLDNVCEWFKAG-VLAVGVGSALVK-GTP 186 (205)
T ss_dssp HHHHHHHTTCTTCEEEEBSSCCTTTHHHHHHHT-CSCEEECHHHHC-SCH
T ss_pred HHHHHHHHhCCCCcEEEcCCCCHHHHHHHHHCC-CCEEEECccccC-CCH
Confidence 4556677777 7899999999999999999998 999999999998 664
No 151
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=98.52 E-value=1.4e-06 Score=79.24 Aligned_cols=123 Identities=12% Similarity=0.115 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCC
Q 025135 25 DQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAID 103 (257)
Q Consensus 25 ~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~ 103 (257)
+++.++++.+.+.||..+.++.|.. ++ .--.+.++++|+++|++ .|.+..+. .
T Consensus 145 ~~~~~~~~~~~~~g~~~~K~Kvg~~--------------------~~----~~d~~~v~avr~~~g~~~~l~vDaN~--~ 198 (370)
T 2chr_A 145 RDLDSAVEMIERRRHNRFKVKLGFR--------------------SP----QDDLIHMEALSNSLGSKAYLRVDVNQ--A 198 (370)
T ss_dssp HHHHHHHHHHHTTSCCEEEEECSSS--------------------CH----HHHHHHHHHHHHHTTTTSEEEEECTT--C
T ss_pred hhHHHHHHHHhhcccceeecccccC--------------------Ch----HHHHHHHHHHHHhcCCCcEEEecCCC--C
Confidence 4556677777889999999987641 11 23456789999999987 46665553 2
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-
Q 025135 104 HLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF- 182 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i- 182 (257)
.+.+++.++++.|++.+ +.|++ +|- .+.....++.+++..++||.+...+
T Consensus 199 -------~~~~~A~~~~~~l~~~~------~~~iE--eP~--------------~~~d~~~~~~l~~~~~ipIa~dE~~~ 249 (370)
T 2chr_A 199 -------WDEQVASVYIPELEALG------VELIE--QPV--------------GRENTQALRRLSDNNRVAIMADESLS 249 (370)
T ss_dssp -------CCTHHHHHHHHHHHTTT------CCEEE--CCS--------------CSSCHHHHHHHHHHCSSEEEESSSCC
T ss_pred -------CCHHHHHHHHHHHHhcC------Cceec--CCC--------------ChhhhhhhhHHhhhccCCccCCccCC
Confidence 34678999999999999 88887 652 1223456778999999999988887
Q ss_pred CHHHHHHHHHcCCCcEEEec
Q 025135 183 TRELGIQALAEDGADLVAYG 202 (257)
Q Consensus 183 t~~~a~~~l~~g~~D~V~ig 202 (257)
+++++.++++.+.+|+|.+=
T Consensus 250 ~~~~~~~~~~~~a~d~i~~d 269 (370)
T 2chr_A 250 TLASAFDLARDRSVDVFSLK 269 (370)
T ss_dssp SHHHHHHHHTTTCCSEECCC
T ss_pred CHHHHHHHHHcCCCcEEEeC
Confidence 89999999999999998753
No 152
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=98.51 E-value=4.7e-07 Score=77.76 Aligned_cols=83 Identities=17% Similarity=0.052 Sum_probs=60.1
Q ss_pred HHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHHHcC
Q 025135 116 GLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQALAED 194 (257)
Q Consensus 116 ~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~~g 194 (257)
..++++.+++.| ++.+-++........ ....++.++++++.+++||+++||+ +++++.++++.|
T Consensus 153 ~~e~~~~~~~~G------~~~i~~~~~~~~g~~---------~g~~~~~~~~l~~~~~ipvia~GGI~~~~d~~~~~~~G 217 (253)
T 1thf_D 153 LRDWVVEVEKRG------AGEILLTSIDRDGTK---------SGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAG 217 (253)
T ss_dssp HHHHHHHHHHTT------CSEEEEEETTTTTSC---------SCCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHTT
T ss_pred HHHHHHHHHHCC------CCEEEEEeccCCCCC---------CCCCHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC
Confidence 356778888898 777666532211110 1113467788888889999999999 689999999765
Q ss_pred CCcEEEechHHhhCchHHHH
Q 025135 195 GADLVAYGRLFISNPDLVLR 214 (257)
Q Consensus 195 ~~D~V~igR~~iadP~l~~k 214 (257)
+|.|++|++++.+|+-+.+
T Consensus 218 -adgv~vGsal~~~~~~~~~ 236 (253)
T 1thf_D 218 -ADAALAASVFHFREIDVRE 236 (253)
T ss_dssp -CSEEEESHHHHTTCSCHHH
T ss_pred -ChHHHHHHHHHcCCCCHHH
Confidence 9999999999999843433
No 153
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=98.50 E-value=1.2e-06 Score=80.54 Aligned_cols=132 Identities=11% Similarity=0.080 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAID 103 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~ 103 (257)
.+++++.|+.+.+.||..|.|..|... +. . ......+--.+.|++||+++|+..|.+..|. .
T Consensus 166 ~e~~~~~a~~~~~~Gf~~iKlKvg~~~-------~~----~-----~~~~~~~~di~~v~avR~a~~d~~L~vDaN~--~ 227 (393)
T 3u9i_A 166 VTAAARAAQAIVARGVTTIKIKIGAGD-------PD----A-----TTIRTMEHDLARIVAIRDVAPTARLILDGNC--G 227 (393)
T ss_dssp CHHHHHHHHHHHTTTCCEEEEECC-----------------------CHHHHHHHHHHHHHHHHHSTTSEEEEECCS--C
T ss_pred HHHHHHHHHHHHHcCCCeEEEEeCCCc-------cc----c-----cccccHHHHHHHHHHHHHHCCCCeEEEEccC--C
Confidence 356677777888899999999987521 00 0 0112355677889999999974344444442 2
Q ss_pred CCCCCCCCcHHHHHHHHHHH--HhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCC
Q 025135 104 HLDATDSDPLGLGLAVIQGL--NKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGG 181 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~L--~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~ 181 (257)
.+.++++++++.| ++.+ +.|++ +|- .+.....++.+++..++||.+...
T Consensus 228 -------w~~~~A~~~~~~L~~~~~~------i~~iE--eP~--------------~~~d~~~~~~l~~~~~iPIa~dE~ 278 (393)
T 3u9i_A 228 -------YTAPDALRLLDMLGVHGIV------PALFE--QPV--------------AKDDEEGLRRLTATRRVPVAADES 278 (393)
T ss_dssp -------CCHHHHHHHHHTTTTTTCC------CSEEE--CCS--------------CTTCTTHHHHHHHTCSSCEEESTT
T ss_pred -------CCHHHHHHHHHHHhhCCCC------eEEEE--CCC--------------CCCcHHHHHHHHhhCCCcEEeCCc
Confidence 3578899999999 7777 88887 652 111234556788889999999888
Q ss_pred C-CHHHHHHHHHcCCCcEEEec
Q 025135 182 F-TRELGIQALAEDGADLVAYG 202 (257)
Q Consensus 182 i-t~~~a~~~l~~g~~D~V~ig 202 (257)
+ +++++.++++.+.+|+|.+=
T Consensus 279 ~~~~~~~~~~i~~~a~d~i~~k 300 (393)
T 3u9i_A 279 VASATDAARLARNAAVDVLNIK 300 (393)
T ss_dssp CCSHHHHHHHHHTTCCSEEEEC
T ss_pred CCCHHHHHHHHHcCCCCEEEec
Confidence 8 89999999999999999764
No 154
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=98.49 E-value=5.2e-07 Score=77.44 Aligned_cols=85 Identities=16% Similarity=0.078 Sum_probs=62.2
Q ss_pred HHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHHHcC
Q 025135 116 GLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQALAED 194 (257)
Q Consensus 116 ~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~~g 194 (257)
..+.++.+++.| ++.+.++........ .....+.++++++.+++||+++||+ +++++.++++.|
T Consensus 154 ~~e~~~~~~~~G------~~~i~~~~~~~~g~~---------~g~~~~~i~~l~~~~~ipvia~GGI~~~~d~~~~~~~G 218 (252)
T 1ka9_F 154 AVEWAVKGVELG------AGEILLTSMDRDGTK---------EGYDLRLTRMVAEAVGVPVIASGGAGRMEHFLEAFQAG 218 (252)
T ss_dssp HHHHHHHHHHHT------CCEEEEEETTTTTTC---------SCCCHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTT
T ss_pred HHHHHHHHHHcC------CCEEEEecccCCCCc---------CCCCHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHCC
Confidence 355678888888 776665532211110 1112567788999999999999999 799999999755
Q ss_pred CCcEEEechHHhhCchHHHHHH
Q 025135 195 GADLVAYGRLFISNPDLVLRFK 216 (257)
Q Consensus 195 ~~D~V~igR~~iadP~l~~k~~ 216 (257)
+|.|++|++++..|+-+.+++
T Consensus 219 -adgv~vgsal~~~~~~~~~~~ 239 (252)
T 1ka9_F 219 -AEAALAASVFHFGEIPIPKLK 239 (252)
T ss_dssp -CSEEEESHHHHTTSSCHHHHH
T ss_pred -CHHHHHHHHHHcCCCCHHHHH
Confidence 999999999999986555543
No 155
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=98.48 E-value=6.3e-07 Score=76.67 Aligned_cols=86 Identities=17% Similarity=0.150 Sum_probs=64.5
Q ss_pred HHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHHHcC
Q 025135 116 GLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQALAED 194 (257)
Q Consensus 116 ~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~~g 194 (257)
..++++.+++.| +++|-++........ .. ..++.++++++.+++|||++||+ +++++.++++.+
T Consensus 146 ~~e~~~~~~~~G------~~~i~~t~~~~~g~~--------~g-~~~~~i~~l~~~~~iPvia~GGI~~~~d~~~~~~~~ 210 (241)
T 1qo2_A 146 PVSLLKRLKEYG------LEEIVHTEIEKDGTL--------QE-HDFSLTKKIAIEAEVKVLAAGGISSENSLKTAQKVH 210 (241)
T ss_dssp HHHHHHHHHTTT------CCEEEEEETTHHHHT--------CC-CCHHHHHHHHHHHTCEEEEESSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC------CCEEEEEeecccccC--------Cc-CCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHhcc
Confidence 356788888999 787776653222111 01 12567788999999999999999 799999999874
Q ss_pred ----C-CcEEEechHHhhCchHHHHHH
Q 025135 195 ----G-ADLVAYGRLFISNPDLVLRFK 216 (257)
Q Consensus 195 ----~-~D~V~igR~~iadP~l~~k~~ 216 (257)
+ ||.|++|++++..+.-+..++
T Consensus 211 ~~~~G~adgv~vgsal~~~~~~~~~~~ 237 (241)
T 1qo2_A 211 TETNGLLKGVIVGRAFLEGILTVEVMK 237 (241)
T ss_dssp HHTTTSEEEEEECHHHHTTSSCHHHHH
T ss_pred cccCCeEeEEEeeHHHHcCCCCHHHHH
Confidence 5 999999999998886666554
No 156
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=98.47 E-value=2.2e-06 Score=73.31 Aligned_cols=128 Identities=16% Similarity=0.140 Sum_probs=86.3
Q ss_pred HHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCC
Q 025135 29 QAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDAT 108 (257)
Q Consensus 29 ~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~ 108 (257)
+-+..+.++|.|.|-+.+++. + +...+.++++.+++. |- .+++.++
T Consensus 92 ~~i~~~~~~Gad~V~l~~~~~------~-----------------~p~~l~~~i~~~~~~-g~-~v~~~v~--------- 137 (232)
T 3igs_A 92 DDVDALAQAGAAIIAVDGTAR------Q-----------------RPVAVEALLARIHHH-HL-LTMADCS--------- 137 (232)
T ss_dssp HHHHHHHHHTCSEEEEECCSS------C-----------------CSSCHHHHHHHHHHT-TC-EEEEECC---------
T ss_pred HHHHHHHHcCCCEEEECcccc------C-----------------CHHHHHHHHHHHHHC-CC-EEEEeCC---------
Confidence 345567889999999887751 1 113577888888864 32 5555443
Q ss_pred CCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHH
Q 025135 109 DSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELG 187 (257)
Q Consensus 109 ~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a 187 (257)
+.+ .++.+++.| +|+|-++...+..... ........++.+++. ++|||+.||+ |++++
T Consensus 138 ---t~e----ea~~a~~~G------ad~Ig~~~~g~t~~~~-------~~~~~~~~i~~l~~~-~ipvIA~GGI~t~~d~ 196 (232)
T 3igs_A 138 ---SVD----DGLACQRLG------ADIIGTTMSGYTTPDT-------PEEPDLPLVKALHDA-GCRVIAEGRYNSPALA 196 (232)
T ss_dssp ---SHH----HHHHHHHTT------CSEEECTTTTSSSSSC-------CSSCCHHHHHHHHHT-TCCEEEESCCCSHHHH
T ss_pred ---CHH----HHHHHHhCC------CCEEEEcCccCCCCCC-------CCCCCHHHHHHHHhc-CCcEEEECCCCCHHHH
Confidence 233 356778899 8988543222221110 011224566778877 9999999999 89999
Q ss_pred HHHHHcCCCcEEEechHHhhCchHHH
Q 025135 188 IQALAEDGADLVAYGRLFISNPDLVL 213 (257)
Q Consensus 188 ~~~l~~g~~D~V~igR~~iadP~l~~ 213 (257)
.++++.| +|.|++|..++ +|+...
T Consensus 197 ~~~~~~G-adgV~VGsal~-~p~~~~ 220 (232)
T 3igs_A 197 AEAIRYG-AWAVTVGSAIT-RLEHIC 220 (232)
T ss_dssp HHHHHTT-CSEEEECHHHH-CHHHHH
T ss_pred HHHHHcC-CCEEEEehHhc-CHHHHH
Confidence 9999997 99999997776 576543
No 157
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=98.47 E-value=1.1e-06 Score=73.50 Aligned_cols=129 Identities=18% Similarity=0.117 Sum_probs=86.5
Q ss_pred HHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCCCC
Q 025135 31 ALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDATDS 110 (257)
Q Consensus 31 A~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~ 110 (257)
++.+.++|.|+|-+|...+ + .-+.++++.+++. |. .+.+-+...
T Consensus 70 ~~~~~~~Gad~v~v~~~~~----------------------~---~~~~~~~~~~~~~-g~-~~~v~~~~~--------- 113 (211)
T 3f4w_A 70 SQLLFDAGADYVTVLGVTD----------------------V---LTIQSCIRAAKEA-GK-QVVVDMICV--------- 113 (211)
T ss_dssp HHHHHHTTCSEEEEETTSC----------------------H---HHHHHHHHHHHHH-TC-EEEEECTTC---------
T ss_pred HHHHHhcCCCEEEEeCCCC----------------------h---hHHHHHHHHHHHc-CC-eEEEEecCC---------
Confidence 6677899999999986430 1 2345667777764 43 455442210
Q ss_pred CcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh-CCcEEEeCCCCHHHHHH
Q 025135 111 DPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY-QGTFICSGGFTRELGIQ 189 (257)
Q Consensus 111 ~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~G~it~~~a~~ 189 (257)
.+ ..+.++.+.+.| ++++.++ +.+....+ .+.....++.+++.+ ++||++.||++++++.+
T Consensus 114 ~t---~~~~~~~~~~~g------~d~i~v~-~g~~g~~~--------~~~~~~~i~~l~~~~~~~~i~~~gGI~~~~~~~ 175 (211)
T 3f4w_A 114 DD---LPARVRLLEEAG------ADMLAVH-TGTDQQAA--------GRKPIDDLITMLKVRRKARIAVAGGISSQTVKD 175 (211)
T ss_dssp SS---HHHHHHHHHHHT------CCEEEEE-CCHHHHHT--------TCCSHHHHHHHHHHCSSCEEEEESSCCTTTHHH
T ss_pred CC---HHHHHHHHHHcC------CCEEEEc-CCCccccc--------CCCCHHHHHHHHHHcCCCcEEEECCCCHHHHHH
Confidence 11 134566777888 8888775 33332110 011235667788886 78999999999999999
Q ss_pred HHHcCCCcEEEechHHhhCchHHHH
Q 025135 190 ALAEDGADLVAYGRLFISNPDLVLR 214 (257)
Q Consensus 190 ~l~~g~~D~V~igR~~iadP~l~~k 214 (257)
+++.| +|.|.+||+++..+|..+.
T Consensus 176 ~~~~G-ad~vvvGsai~~~~d~~~~ 199 (211)
T 3f4w_A 176 YALLG-PDVVIVGSAITHAADPAGE 199 (211)
T ss_dssp HHTTC-CSEEEECHHHHTCSSHHHH
T ss_pred HHHcC-CCEEEECHHHcCCCCHHHH
Confidence 99887 9999999999987775443
No 158
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.46 E-value=1.1e-06 Score=74.67 Aligned_cols=83 Identities=22% Similarity=0.148 Sum_probs=60.2
Q ss_pred HHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHHHcCC
Q 025135 117 LAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQALAEDG 195 (257)
Q Consensus 117 ~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~~g~ 195 (257)
.++++.+.+.| +++|.++........ .......++.+++.+++||+++||+ +++++.++++.|
T Consensus 157 ~e~~~~~~~~G------~d~i~~~~~~~~g~~---------~~~~~~~i~~l~~~~~~pvia~GGi~~~~~~~~~~~~G- 220 (253)
T 1h5y_A 157 VKWAKEVEELG------AGEILLTSIDRDGTG---------LGYDVELIRRVADSVRIPVIASGGAGRVEHFYEAAAAG- 220 (253)
T ss_dssp HHHHHHHHHHT------CSEEEEEETTTTTTC---------SCCCHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTT-
T ss_pred HHHHHHHHhCC------CCEEEEecccCCCCc---------CcCCHHHHHHHHHhcCCCEEEeCCCCCHHHHHHHHHcC-
Confidence 45678888899 888877543211110 0112456677888889999999999 689999999766
Q ss_pred CcEEEechHHhhCchHHHHH
Q 025135 196 ADLVAYGRLFISNPDLVLRF 215 (257)
Q Consensus 196 ~D~V~igR~~iadP~l~~k~ 215 (257)
+|.|++|++++..++-+.++
T Consensus 221 a~~v~vgsal~~~~~~~~~~ 240 (253)
T 1h5y_A 221 ADAVLAASLFHFRVLSIAQV 240 (253)
T ss_dssp CSEEEESHHHHTTSSCHHHH
T ss_pred CcHHHHHHHHHcCCCCHHHH
Confidence 99999999999887444443
No 159
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=98.45 E-value=1.7e-06 Score=79.01 Aligned_cols=111 Identities=14% Similarity=0.122 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHhCCCeEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCC-----C---
Q 025135 78 LMQLVREVIVAIGADRVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYG-----Q--- 149 (257)
Q Consensus 78 ~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~-----~--- 149 (257)
..+.|+.||+.++. ||.+|.-.+ +.+ .+.++.++++| +|+|.+++....... .
T Consensus 175 ~~~~i~~i~~~~~v-PVivK~vG~--------g~s----~~~A~~l~~aG------ad~I~V~g~GGt~~~~iE~~R~~~ 235 (368)
T 3vkj_A 175 ALEKLRDISKELSV-PIIVKESGN--------GIS----METAKLLYSYG------IKNFDTSGQGGTNWIAIEMIRDIR 235 (368)
T ss_dssp HHHHHHHHHTTCSS-CEEEECSSS--------CCC----HHHHHHHHHTT------CCEEECCCBTSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-CEEEEeCCC--------CCC----HHHHHHHHhCC------CCEEEEeCCCCCcccchhhhhccc
Confidence 67889999998854 899996422 012 24578899999 999998542111000 0
Q ss_pred ---------cCCCCCCCchhHHHHHHHHHHHhC-CcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhh----Cch
Q 025135 150 ---------TESGRPGTEDEEAQLLRTWRRSYQ-GTFICSGGF-TRELGIQALAEDGADLVAYGRLFIS----NPD 210 (257)
Q Consensus 150 ---------~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~ia----dP~ 210 (257)
......+ . +....+..+++.++ +|||++||| ++.++.++|.-| +|+|++||+++. .|+
T Consensus 236 ~~~~~~~~~~~~~~~g-~-pt~~~l~~v~~~~~~ipvia~GGI~~~~d~~kal~lG-A~~v~ig~~~l~~~~~G~~ 308 (368)
T 3vkj_A 236 RGNWKAESAKNFLDWG-V-PTAASIMEVRYSVPDSFLVGSGGIRSGLDAAKAIALG-ADIAGMALPVLKSAIEGKE 308 (368)
T ss_dssp TTCTHHHHHHHTTTCS-C-BHHHHHHHHHHHSTTCEEEEESSCCSHHHHHHHHHHT-CSEEEECHHHHHHHHHCHH
T ss_pred ccccchhhcccccccc-c-cHHHHHHHHHHHcCCCcEEEECCCCCHHHHHHHHHcC-CCEEEEcHHHHHHHhcChH
Confidence 0000001 1 12244567777774 899999999 899999999997 999999999994 664
No 160
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.44 E-value=4.4e-06 Score=78.72 Aligned_cols=135 Identities=18% Similarity=0.169 Sum_probs=87.4
Q ss_pred HHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCC
Q 025135 27 YRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLD 106 (257)
Q Consensus 27 f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~ 106 (257)
..+.|+.+.++|+|.|.+++++|+ .....+.++.+++.++.-++...--
T Consensus 234 ~~~~a~~l~~~G~d~ivi~~a~g~------------------------~~~~~~~i~~l~~~~p~~pvi~G~v------- 282 (491)
T 1zfj_A 234 TFERAEALFEAGADAIVIDTAHGH------------------------SAGVLRKIAEIRAHFPNRTLIAGNI------- 282 (491)
T ss_dssp HHHHHHHHHHHTCSEEEECCSCTT------------------------CHHHHHHHHHHHHHCSSSCEEEEEE-------
T ss_pred HHHHHHHHHHcCCCeEEEeeecCc------------------------chhHHHHHHHHHHHCCCCcEeCCCc-------
Confidence 357788888999999999986532 1236688999999985435542111
Q ss_pred CCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCC-CcCCCCCCCchhHHHHHHHHHH---HhCCcEEEeCCC
Q 025135 107 ATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYG-QTESGRPGTEDEEAQLLRTWRR---SYQGTFICSGGF 182 (257)
Q Consensus 107 ~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ir~---~~~~pvi~~G~i 182 (257)
.+. +.++.+.++| ++++.+..+.-.... ....+ . .. .....+..+.+ ..++|||+.||+
T Consensus 283 ----~t~----~~a~~~~~~G------ad~I~vg~g~g~~~~tr~~~~-~-~~-p~~~~l~~~~~~~~~~~ipvia~GGi 345 (491)
T 1zfj_A 283 ----ATA----EGARALYDAG------VDVVKVGIGPGSICTTRVVAG-V-GV-PQVTAIYDAAAVAREYGKTIIADGGI 345 (491)
T ss_dssp ----CSH----HHHHHHHHTT------CSEEEECSSCCTTBCHHHHTC-C-CC-CHHHHHHHHHHHHHHTTCEEEEESCC
T ss_pred ----cCH----HHHHHHHHcC------CCEEEECccCCcceEEeeecC-C-CC-CcHHHHHHHHHHHhhcCCCEEeeCCC
Confidence 122 4566778899 888877521100000 00000 0 11 12233344433 467999999999
Q ss_pred -CHHHHHHHHHcCCCcEEEechHHhhCch
Q 025135 183 -TRELGIQALAEDGADLVAYGRLFISNPD 210 (257)
Q Consensus 183 -t~~~a~~~l~~g~~D~V~igR~~iadP~ 210 (257)
++.++.+++..| +|+|++||+|+..++
T Consensus 346 ~~~~di~kal~~G-A~~v~vG~~~~~~~e 373 (491)
T 1zfj_A 346 KYSGDIVKALAAG-GNAVMLGSMFAGTDE 373 (491)
T ss_dssp CSHHHHHHHHHTT-CSEEEESTTTTTBSS
T ss_pred CCHHHHHHHHHcC-CcceeeCHHhhCCCc
Confidence 899999999987 999999999996544
No 161
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=98.43 E-value=7.1e-06 Score=69.12 Aligned_cols=143 Identities=13% Similarity=0.124 Sum_probs=88.8
Q ss_pred CCCCChhhHHHHHHHHHHH------------HHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHH
Q 025135 12 PQALQTSEIPEVIDQYRQA------------ALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLM 79 (257)
Q Consensus 12 p~~lt~~eI~~ii~~f~~A------------A~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~ 79 (257)
++.+|.+++.++++..... ...+.++|.|+|.+|... .
T Consensus 50 ~~~~~~~~~~~~~~~l~~~~~~~~~l~v~~~~~~a~~~gad~v~l~~~~-----------------~------------- 99 (221)
T 1yad_A 50 ERSKSAADILKLLDLIFEGGIDKRKLVMNGRVDIALFSTIHRVQLPSGS-----------------F------------- 99 (221)
T ss_dssp CTTSCHHHHHHHHHHHHHTTCCGGGEEEESCHHHHHTTTCCEEEECTTS-----------------C-------------
T ss_pred cCCCCHHHHHHHHHHHHHhcCcCCeEEEeChHHHHHHcCCCEEEeCCCc-----------------c-------------
Confidence 4457777777776665432 244667888888876432 0
Q ss_pred HHHHHHHHHhCCCeEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCch
Q 025135 80 QLVREVIVAIGADRVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTED 159 (257)
Q Consensus 80 eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~ 159 (257)
.++.+|+..+.-.+++.++ +.++ ++...+.| +||+-+.. .+....+ .+ ..+
T Consensus 100 -~~~~~~~~~~~~~ig~sv~------------t~~~----~~~a~~~g------aD~i~~~~-~f~~~~~--~g---~~~ 150 (221)
T 1yad_A 100 -SPKQIRARFPHLHIGRSVH------------SLEE----AVQAEKED------ADYVLFGH-VFETDCK--KG---LEG 150 (221)
T ss_dssp -CHHHHHHHCTTCEEEEEEC------------SHHH----HHHHHHTT------CSEEEEEC-CC---------------
T ss_pred -CHHHHHHHCCCCEEEEEcC------------CHHH----HHHHHhCC------CCEEEECC-ccccCCC--CC---CCC
Confidence 1233344333225666443 2333 34456788 88987743 2221110 00 112
Q ss_pred hHHHHHHHHHHHhCCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCchHHHH
Q 025135 160 EEAQLLRTWRRSYQGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNPDLVLR 214 (257)
Q Consensus 160 ~~~~~~~~ir~~~~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP~l~~k 214 (257)
..+..++.+++.+++||++.||++++++.++++.| +|+|++|++++..++...+
T Consensus 151 ~~~~~l~~~~~~~~~pvia~GGI~~~nv~~~~~~G-a~gv~vgs~i~~~~d~~~~ 204 (221)
T 1yad_A 151 RGVSLLSDIKQRISIPVIAIGGMTPDRLRDVKQAG-ADGIAVMSGIFSSAEPLEA 204 (221)
T ss_dssp CHHHHHHHHHHHCCSCEEEESSCCGGGHHHHHHTT-CSEEEESHHHHTSSSHHHH
T ss_pred CCHHHHHHHHHhCCCCEEEECCCCHHHHHHHHHcC-CCEEEEhHHhhCCCCHHHH
Confidence 33466777887789999999999999999999986 9999999999987764333
No 162
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.43 E-value=1.2e-06 Score=74.62 Aligned_cols=88 Identities=11% Similarity=0.068 Sum_probs=70.6
Q ss_pred HHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHHHc
Q 025135 115 LGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQALAE 193 (257)
Q Consensus 115 ~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~~ 193 (257)
+..++++.+++.| +++++++....... ........++.+++.+++||+++|++ ++++++++++.
T Consensus 34 ~~~~~a~~~~~~G------~d~i~v~~~~~~~~---------~~~~~~~~i~~i~~~~~ipvi~~g~i~~~~~~~~~~~~ 98 (253)
T 1h5y_A 34 DPVEMAVRYEEEG------ADEIAILDITAAPE---------GRATFIDSVKRVAEAVSIPVLVGGGVRSLEDATTLFRA 98 (253)
T ss_dssp CHHHHHHHHHHTT------CSCEEEEECCCCTT---------THHHHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHH
T ss_pred cHHHHHHHHHHcC------CCEEEEEeCCcccc---------CCcccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHc
Confidence 3567899999999 89998875322110 12234567788998899999999999 89999999998
Q ss_pred CCCcEEEechHHhhCchHHHHHHcC
Q 025135 194 DGADLVAYGRLFISNPDLVLRFKLN 218 (257)
Q Consensus 194 g~~D~V~igR~~iadP~l~~k~~~g 218 (257)
| +|+|.+++.++.||+++.++.+.
T Consensus 99 G-ad~V~i~~~~~~~~~~~~~~~~~ 122 (253)
T 1h5y_A 99 G-ADKVSVNTAAVRNPQLVALLARE 122 (253)
T ss_dssp T-CSEEEESHHHHHCTHHHHHHHHH
T ss_pred C-CCEEEEChHHhhCcHHHHHHHHH
Confidence 8 99999999999999999887654
No 163
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=98.42 E-value=5.1e-06 Score=76.55 Aligned_cols=134 Identities=17% Similarity=0.122 Sum_probs=87.6
Q ss_pred HHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCC
Q 025135 29 QAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDAT 108 (257)
Q Consensus 29 ~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~ 108 (257)
+.++.+.++|.|.|.|..+||+ ...+.++|+.+|++++ .+|.+.--
T Consensus 147 e~~~~lveaGvdvIvldta~G~------------------------~~~~~e~I~~ik~~~~-i~Vi~g~V--------- 192 (400)
T 3ffs_A 147 ERAKLLVEAGVDVIVLDSAHGH------------------------SLNIIRTLKEIKSKMN-IDVIVGNV--------- 192 (400)
T ss_dssp HHHHHHHHHTCSEEEECCSCCS------------------------BHHHHHHHHHHHTTCC-CEEEEEEE---------
T ss_pred HHHHHHHHcCCCEEEEeCCCCC------------------------cccHHHHHHHHHhcCC-CeEEEeec---------
Confidence 4567778999999999777631 1346788999998874 36655321
Q ss_pred CCCcHHHHHHHHHHHHhcCCccCCceeEEEeeC-CCcccCCCcCCCCCCCchhHHHHHHHHHHH---hCCcEEEeCCC-C
Q 025135 109 DSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQ-PRYTAYGQTESGRPGTEDEEAQLLRTWRRS---YQGTFICSGGF-T 183 (257)
Q Consensus 109 ~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~---~~~pvi~~G~i-t 183 (257)
.+. +.++.++++| +|+|.+.. +.......... .. ..+ ....+..+++. +++|||+.||| +
T Consensus 193 --~t~----e~A~~a~~aG------AD~I~vG~g~Gs~~~tr~~~-g~-g~p-~~~al~~v~~~~~~~~IPVIA~GGI~~ 257 (400)
T 3ffs_A 193 --VTE----EATKELIENG------ADGIKVGIGPGSICTTRIVA-GV-GVP-QITAIEKCSSVASKFGIPIIADGGIRY 257 (400)
T ss_dssp --CSH----HHHHHHHHTT------CSEEEECC---------CCS-CB-CCC-HHHHHHHHHHHHTTTTCCEEEESCCCS
T ss_pred --CCH----HHHHHHHHcC------CCEEEEeCCCCcCccccccc-cc-chh-HHHHHHHHHHHHHhcCCCEEecCCCCC
Confidence 123 3467788999 88888731 10000000000 00 112 23445555544 57999999999 8
Q ss_pred HHHHHHHHHcCCCcEEEechHHhhCchHH
Q 025135 184 RELGIQALAEDGADLVAYGRLFISNPDLV 212 (257)
Q Consensus 184 ~~~a~~~l~~g~~D~V~igR~~iadP~l~ 212 (257)
+.++.++|..| +|.|++|+.|+.-++-+
T Consensus 258 ~~di~kalalG-Ad~V~vGt~f~~t~Es~ 285 (400)
T 3ffs_A 258 SGDIGKALAVG-ASSVMIGSILAGTEESP 285 (400)
T ss_dssp HHHHHHHHTTT-CSEEEECGGGTTBTTSS
T ss_pred HHHHHHHHHcC-CCEEEEChHHhcCCCCC
Confidence 99999999997 99999999999876543
No 164
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=98.41 E-value=3.2e-07 Score=78.51 Aligned_cols=86 Identities=10% Similarity=0.159 Sum_probs=68.5
Q ss_pred HHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHHHcC
Q 025135 116 GLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQALAED 194 (257)
Q Consensus 116 ~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~~g 194 (257)
..++++.+++.| +++|+++++...... .......++.++ .+++||+++|++ ++++++++++.|
T Consensus 32 ~~~~a~~~~~~G------ad~i~v~d~~~~~~~---------~~~~~~~i~~i~-~~~ipvi~~Ggi~~~~~~~~~~~~G 95 (241)
T 1qo2_A 32 PVELVEKLIEEG------FTLIHVVDLSNAIEN---------SGENLPVLEKLS-EFAEHIQIGGGIRSLDYAEKLRKLG 95 (241)
T ss_dssp HHHHHHHHHHTT------CCCEEEEEHHHHHHC---------CCTTHHHHHHGG-GGGGGEEEESSCCSHHHHHHHHHTT
T ss_pred HHHHHHHHHHcC------CCEEEEecccccccC---------CchhHHHHHHHH-hcCCcEEEECCCCCHHHHHHHHHCC
Confidence 467899999999 899998864332111 112345667777 788999999999 899999999987
Q ss_pred CCcEEEechHHhhCchHHHHHHcCC
Q 025135 195 GADLVAYGRLFISNPDLVLRFKLNA 219 (257)
Q Consensus 195 ~~D~V~igR~~iadP~l~~k~~~g~ 219 (257)
||.|.+|+.++.||+++.++ +..
T Consensus 96 -ad~V~lg~~~l~~p~~~~~~-~~~ 118 (241)
T 1qo2_A 96 -YRRQIVSSKVLEDPSFLKSL-REI 118 (241)
T ss_dssp -CCEEEECHHHHHCTTHHHHH-HTT
T ss_pred -CCEEEECchHhhChHHHHHH-HHc
Confidence 99999999999999999999 443
No 165
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=98.39 E-value=2e-05 Score=68.36 Aligned_cols=140 Identities=17% Similarity=0.119 Sum_probs=89.5
Q ss_pred HHHHHHHHHcCCCEE--EecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCC
Q 025135 28 RQAALNAIQAGFDGI--EIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHL 105 (257)
Q Consensus 28 ~~AA~~a~~aGfDgV--EIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~ 105 (257)
...++.|.++|+|.| .++.++ + +.+...+.+.++++.+++ .|- ++.+.+.+. +.
T Consensus 102 ~~~v~~a~~~Ga~~v~~~l~~~~---------~-----------~~~~~~~~~~~v~~~~~~-~g~-~viv~~~~~-G~- 157 (273)
T 2qjg_A 102 VTTVEEAIRMGADAVSIHVNVGS---------D-----------EDWEAYRDLGMIAETCEY-WGM-PLIAMMYPR-GK- 157 (273)
T ss_dssp CSCHHHHHHTTCSEEEEEEEETS---------T-----------THHHHHHHHHHHHHHHHH-HTC-CEEEEEEEC-ST-
T ss_pred HHHHHHHHHcCCCEEEEEEecCC---------C-----------CHHHHHHHHHHHHHHHHH-cCC-CEEEEeCCC-Cc-
Confidence 345666778999999 555554 1 123334566677777664 343 444444321 11
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCCC--
Q 025135 106 DATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGFT-- 183 (257)
Q Consensus 106 ~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~it-- 183 (257)
+...+.+.+...++++..++.| +|||-++.+ .....++++++.+++||++.||++
T Consensus 158 ~l~~~~~~~~~~~~a~~a~~~G------ad~i~~~~~-----------------~~~~~l~~i~~~~~ipvva~GGi~~~ 214 (273)
T 2qjg_A 158 HIQNERDPELVAHAARLGAELG------ADIVKTSYT-----------------GDIDSFRDVVKGCPAPVVVAGGPKTN 214 (273)
T ss_dssp TCSCTTCHHHHHHHHHHHHHTT------CSEEEECCC-----------------SSHHHHHHHHHHCSSCEEEECCSCCS
T ss_pred ccCCCCCHhHHHHHHHHHHHcC------CCEEEECCC-----------------CCHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 1111123445556678889999 899887521 013566778888899999999994
Q ss_pred -HHH----HHHHHHcCCCcEEEechHHhhCchHHHHH
Q 025135 184 -REL----GIQALAEDGADLVAYGRLFISNPDLVLRF 215 (257)
Q Consensus 184 -~~~----a~~~l~~g~~D~V~igR~~iadP~l~~k~ 215 (257)
.++ +.++++.| +|.|++||.++..||..+.+
T Consensus 215 ~~~~~~~~~~~~~~~G-a~gv~vg~~i~~~~~~~~~~ 250 (273)
T 2qjg_A 215 TDEEFLQMIKDAMEAG-AAGVAVGRNIFQHDDVVGIT 250 (273)
T ss_dssp SHHHHHHHHHHHHHHT-CSEEECCHHHHTSSSHHHHH
T ss_pred CHHHHHHHHHHHHHcC-CcEEEeeHHhhCCCCHHHHH
Confidence 666 44555666 99999999999988765443
No 166
>3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A*
Probab=98.37 E-value=5.3e-06 Score=76.26 Aligned_cols=131 Identities=14% Similarity=0.161 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccC
Q 025135 23 VIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPA 101 (257)
Q Consensus 23 ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~ 101 (257)
-++++++.|+.+.+.||..+.|+.|... .|-.+ ....+--.+.|++||+++|++ .|.+..+.
T Consensus 148 ~~e~~~~~a~~~~~~Gf~~~KlKvg~~~---------------~~~~~-~~~~~~d~~~v~avR~a~g~~~~l~vDaN~- 210 (392)
T 3v5c_A 148 AVALMQEEAMQGYAKGQRHFKIKVGRGG---------------RHMPL-WEGTKRDIAIVRGISEVAGPAGKIMIDANN- 210 (392)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEECCTTT---------------TTSCH-HHHHHHHHHHHHHHHHHHCTTCCEEEECTT-
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCC---------------ccccc-cccHHHHHHHHHHHHHHcCCCCcEEeeCCC-
Confidence 4566777888888999999999987510 11111 122456778899999999987 57766653
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHH-----hCCcE
Q 025135 102 IDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRS-----YQGTF 176 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~-----~~~pv 176 (257)
. .+.++++++++.|++.+ +.|++ +|.. . ....++.+++. .++||
T Consensus 211 -~-------w~~~~A~~~~~~L~~~~------l~~iE--eP~~--------------~-d~~~~~~l~~~~~~~~~~ipI 259 (392)
T 3v5c_A 211 -A-------YNLNLTKEVLAALSDVN------LYWLE--AAFH--------------E-DEALYEDLKEWLGQRGQNVLI 259 (392)
T ss_dssp -C-------CCHHHHHHHHHHTTTSC------CCEEE--CSSS--------------C-CHHHHHHHHHHHHHHTCCCEE
T ss_pred -C-------cCHHHHHHHHHhcccCC------CeEEe--CCCC--------------c-CHHHHHHHHHhhccCCCCCcE
Confidence 2 35788999999999998 88987 6521 1 12344566665 46777
Q ss_pred EEeCCCCHHHHHHHHHcCCCcEEEe
Q 025135 177 ICSGGFTRELGIQALAEDGADLVAY 201 (257)
Q Consensus 177 i~~G~it~~~a~~~l~~g~~D~V~i 201 (257)
.+...+..+++.++++.+.+|+|.+
T Consensus 260 a~gE~~~~~~~~~li~~~a~dii~~ 284 (392)
T 3v5c_A 260 ADGEGLASPHLIEWATRGRVDVLQY 284 (392)
T ss_dssp EECCSSCCTTHHHHHHTTSCCEECC
T ss_pred ECCCcccHHHHHHHHHcCCCcEEEe
Confidence 6666666778899999999999976
No 167
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=98.36 E-value=6.9e-07 Score=77.34 Aligned_cols=85 Identities=16% Similarity=0.071 Sum_probs=56.0
Q ss_pred HHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHHHcCC
Q 025135 117 LAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQALAEDG 195 (257)
Q Consensus 117 ~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~~g~ 195 (257)
.++++.+++.| +++|-++........ .......++.+++.+++|||++||+ +++++.++++.|
T Consensus 159 ~e~~~~~~~~G------~~~i~~t~~~~~g~~---------~g~~~~~i~~l~~~~~ipvia~GGI~~~ed~~~~~~~G- 222 (266)
T 2w6r_A 159 RDWVVEVEKRG------AGEILLTSIDRDGTK---------SGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAG- 222 (266)
T ss_dssp HHHHHHHHHTT------CSEEEEEETTTTTTC---------SCCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHHT-
T ss_pred HHHHHHHHHcC------CCEEEEEeecCCCCc---------CCCCHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHcC-
Confidence 45778888899 777766542211110 1112467788888899999999999 799999999876
Q ss_pred CcEEEechHHhhCchHHHHHHc
Q 025135 196 ADLVAYGRLFISNPDLVLRFKL 217 (257)
Q Consensus 196 ~D~V~igR~~iadP~l~~k~~~ 217 (257)
||.|++|++++.+|+.+.++++
T Consensus 223 adgv~vgsal~~~~~~~~~~~~ 244 (266)
T 2w6r_A 223 ADAALAASVFHFREIDMRELKE 244 (266)
T ss_dssp CSEEEESTTTC-----------
T ss_pred CHHHHccHHHHcCCCCHHHHHH
Confidence 9999999999999988777654
No 168
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=98.34 E-value=6.1e-06 Score=70.12 Aligned_cols=128 Identities=18% Similarity=0.243 Sum_probs=83.4
Q ss_pred HHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCCCC
Q 025135 31 ALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDATDS 110 (257)
Q Consensus 31 A~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~ 110 (257)
+..+.++|.|+|.+|... . +. .+.++++.+|+. |. .+++.+++.
T Consensus 80 i~~~~~agad~v~vH~~~---------~------~~----------~~~~~~~~i~~~-g~-~igv~~~p~--------- 123 (228)
T 1h1y_A 80 VEPLAKAGASGFTFHIEV---------S------RD----------NWQELIQSIKAK-GM-RPGVSLRPG--------- 123 (228)
T ss_dssp HHHHHHHTCSEEEEEGGG---------C------TT----------THHHHHHHHHHT-TC-EEEEEECTT---------
T ss_pred HHHHHHcCCCEEEECCCC---------c------cc----------HHHHHHHHHHHc-CC-CEEEEEeCC---------
Confidence 455667999999999764 0 10 124667777654 32 678888653
Q ss_pred CcHHHHHHHHHHHHhc--CCccCCceeEEEeeC--CCcccCCCcCCCCCCCchhHHHHHHHHHHHh-CCcEEEeCCCCHH
Q 025135 111 DPLGLGLAVIQGLNKL--QIDQGAKLTYLHVTQ--PRYTAYGQTESGRPGTEDEEAQLLRTWRRSY-QGTFICSGGFTRE 185 (257)
Q Consensus 111 ~~~~~~~~l~~~L~~~--G~~~~~~vd~i~v~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~G~it~~ 185 (257)
++.+ ..+.+.+. + +||+-+.. |.+.. ....+.....++++|+.. +.|+++.||++++
T Consensus 124 t~~e----~~~~~~~~~~~------~d~vl~~sv~pg~~g--------~~~~~~~l~~i~~~~~~~~~~pi~v~GGI~~~ 185 (228)
T 1h1y_A 124 TPVE----EVFPLVEAENP------VELVLVMTVEPGFGG--------QKFMPEMMEKVRALRKKYPSLDIEVDGGLGPS 185 (228)
T ss_dssp SCGG----GGHHHHHSSSC------CSEEEEESSCTTCSS--------CCCCGGGHHHHHHHHHHCTTSEEEEESSCSTT
T ss_pred CCHH----HHHHHHhcCCC------CCEEEEEeecCCCCc--------ccCCHHHHHHHHHHHHhcCCCCEEEECCcCHH
Confidence 1222 22334443 5 77776532 22211 112233445667788887 7899999999889
Q ss_pred HHHHHHHcCCCcEEEechHHhhCchHHH
Q 025135 186 LGIQALAEDGADLVAYGRLFISNPDLVL 213 (257)
Q Consensus 186 ~a~~~l~~g~~D~V~igR~~iadP~l~~ 213 (257)
.+.++++.| +|.|.+|++++..||.-.
T Consensus 186 ni~~~~~aG-aD~vvvGsai~~~~d~~~ 212 (228)
T 1h1y_A 186 TIDVAASAG-ANCIVAGSSIFGAAEPGE 212 (228)
T ss_dssp THHHHHHHT-CCEEEESHHHHTSSCHHH
T ss_pred HHHHHHHcC-CCEEEECHHHHCCCCHHH
Confidence 999999887 999999999998776433
No 169
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=98.32 E-value=1.4e-05 Score=72.79 Aligned_cols=119 Identities=15% Similarity=0.071 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCC
Q 025135 25 DQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAID 103 (257)
Q Consensus 25 ~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~ 103 (257)
+++++.|+++.+.||..+.|+.|. + .+-..+.|++||+++|++ .|.+..+. .
T Consensus 146 ~~~~~~a~~~~~~G~~~~KiKvG~---------------------~----~~~d~~~v~avr~a~g~~~~l~vDaN~--~ 198 (372)
T 3cyj_A 146 RRLQEQLGGWAAAGIPRVKMKVGR---------------------E----PEKDPERVRAAREAIGESVELMVDANG--A 198 (372)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCS---------------------S----GGGHHHHHHHHHHHHCTTSEEEEECTT--C
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCC---------------------C----HHHHHHHHHHHHHHhCCCCeEEEECCC--C
Confidence 346667777788999999997542 2 233568899999999986 56665553 2
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhc-CCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhC--CcEEEeC
Q 025135 104 HLDATDSDPLGLGLAVIQGLNKL-QIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQ--GTFICSG 180 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~L~~~-G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~--~pvi~~G 180 (257)
.+.++++++++.|++. + +.||+ +|- .+......+.+++.++ +||++..
T Consensus 199 -------~~~~~a~~~~~~l~~~~~------i~~iE--qP~--------------~~~d~~~~~~l~~~~~~~ipIa~dE 249 (372)
T 3cyj_A 199 -------YTRKQALYWAGAFAREAG------ISYLE--EPV--------------SSEDREGLRLLRDRGPGGVAIAAGE 249 (372)
T ss_dssp -------SCHHHHHHHHHHHHHHHC------CCEEE--CSS--------------CTTCHHHHHHHHHHSCTTCEEEECT
T ss_pred -------CCHHHHHHHHHHHHhhcC------CcEEE--CCC--------------CcccHHHHHHHHHhCCCCCCEECCC
Confidence 3578899999999999 8 88887 652 1223455677888887 6998887
Q ss_pred CC-CHHHHHHHHHcCCCcEEEe
Q 025135 181 GF-TRELGIQALAEDGADLVAY 201 (257)
Q Consensus 181 ~i-t~~~a~~~l~~g~~D~V~i 201 (257)
.+ +..++.++ .+.+|+|.+
T Consensus 250 ~~~~~~~~~~~--~~a~d~i~i 269 (372)
T 3cyj_A 250 YEWTLPQLHDL--AGCVDILQA 269 (372)
T ss_dssp TCCSHHHHHHH--HTTCSEEEE
T ss_pred CccCHHHHHHH--hCCCCEEec
Confidence 77 88888887 677999987
No 170
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=98.31 E-value=8.7e-06 Score=74.70 Aligned_cols=133 Identities=18% Similarity=0.081 Sum_probs=81.5
Q ss_pred HHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCCCC
Q 025135 31 ALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDATDS 110 (257)
Q Consensus 31 A~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~ 110 (257)
++.+.++|+|.|.+|... +. .+|+++ .+..+-|+.+|+.++- ||.++--
T Consensus 171 a~~~~~agad~i~i~~~~--~~------------~~~~~~-----~~~~~~i~~l~~~~~~-pvi~ggi----------- 219 (393)
T 2qr6_A 171 APIVIKAGADLLVIQGTL--IS------------AEHVNT-----GGEALNLKEFIGSLDV-PVIAGGV----------- 219 (393)
T ss_dssp HHHHHHTTCSEEEEECSS--CC------------SSCCCC----------CHHHHHHHCSS-CEEEECC-----------
T ss_pred HHHHHHCCCCEEEEeCCc--cc------------cccCCC-----cccHHHHHHHHHhcCC-CEEECCc-----------
Confidence 455567899999987421 00 123321 0122236777887743 6666421
Q ss_pred CcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHH-------hC---CcEEEeC
Q 025135 111 DPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRS-------YQ---GTFICSG 180 (257)
Q Consensus 111 ~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~-------~~---~pvi~~G 180 (257)
.+.++ ++.+.+.| +|.|.+..+..... ...+ ........+..+++. ++ +|||+.|
T Consensus 220 ~t~e~----a~~~~~~G------ad~i~vg~Gg~~~~--~~~~---~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~G 284 (393)
T 2qr6_A 220 NDYTT----ALHMMRTG------AVGIIVGGGENTNS--LALG---MEVSMATAIADVAAARRDYLDETGGRYVHIIADG 284 (393)
T ss_dssp CSHHH----HHHHHTTT------CSEEEESCCSCCHH--HHTS---CCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECS
T ss_pred CCHHH----HHHHHHcC------CCEEEECCCccccc--ccCC---CCCChHHHHHHHHHHHHHhHhhcCCcceEEEEEC
Confidence 23443 56777899 89998854221110 0000 011233445555554 55 9999999
Q ss_pred CC-CHHHHHHHHHcCCCcEEEechHHhhCch
Q 025135 181 GF-TRELGIQALAEDGADLVAYGRLFISNPD 210 (257)
Q Consensus 181 ~i-t~~~a~~~l~~g~~D~V~igR~~iadP~ 210 (257)
|| +..++.++|..| +|+|++||+++..+.
T Consensus 285 GI~~~~dv~kalalG-A~~V~iG~~~l~~~e 314 (393)
T 2qr6_A 285 SIENSGDVVKAIACG-ADAVVLGSPLARAEE 314 (393)
T ss_dssp SCCSHHHHHHHHHHT-CSEEEECGGGGGSTT
T ss_pred CCCCHHHHHHHHHcC-CCEEEECHHHHcCCC
Confidence 99 899999999998 999999999998875
No 171
>3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, nysgrc, L-rhamnonate dehydratase,target PSI-2; HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB: 2oz3_A*
Probab=98.30 E-value=1.5e-05 Score=73.55 Aligned_cols=119 Identities=17% Similarity=0.144 Sum_probs=86.8
Q ss_pred HHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCCCCCCCCCCc
Q 025135 34 AIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAIDHLDATDSDP 112 (257)
Q Consensus 34 a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~~~~~~~~~~ 112 (257)
+++.||..+.|+.+.| |. .| ....+--.+.|++||+++|++ .|.+..+. . .+
T Consensus 170 ~~~~Gf~~~K~Kv~~g--------~~-------~g---~~~~~~di~~v~avRea~G~~~~L~vDaN~--~-------w~ 222 (404)
T 3ekg_A 170 AQKMGFIGGKMPLHHG--------PS-------EG---EEGLKKNLEELATMRERVGPDFWLMFDCWM--S-------LD 222 (404)
T ss_dssp HHHTTCSEEEEECCCC--------GG-------GH---HHHHHHHHHHHHHHHHHHCSSSEEEEECTT--C-------CC
T ss_pred HHHcCCCEEEEecCCC--------Cc-------cc---cccHHHHHHHHHHHHHHhCCCCeEEecCCC--C-------CC
Confidence 4578999999986542 10 01 122456788899999999987 56666553 1 35
Q ss_pred HHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcE-EEeC-CC-CHHHHHH
Q 025135 113 LGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTF-ICSG-GF-TRELGIQ 189 (257)
Q Consensus 113 ~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pv-i~~G-~i-t~~~a~~ 189 (257)
.++++++++.|++.+ +.|++ +|. .+.....++.+++.+++|| |+.| .+ ++.++.+
T Consensus 223 ~~~A~~~~~~Le~~~------l~~iE--eP~--------------~~~d~~~~a~l~~~~~~pi~Ia~gE~~~~~~~~~~ 280 (404)
T 3ekg_A 223 LNYATRLARGAREYG------LKWIE--EAL--------------PPDDYWGYAELRRNAPTGMMVTTGEHEATRWGFRM 280 (404)
T ss_dssp HHHHHHHHHHHGGGT------CCEEE--CCS--------------CTTCHHHHHHHHHHSCTTCEEEECTTCCHHHHHHH
T ss_pred HHHHHHHHHHHhhcC------CcEEe--cCC--------------CcccHHHHHHHHHhcCCCeEEEecCccCCHHHHHH
Confidence 788999999999999 88987 652 2223456678999988873 4444 45 7999999
Q ss_pred HHHcCCCcEEEe
Q 025135 190 ALAEDGADLVAY 201 (257)
Q Consensus 190 ~l~~g~~D~V~i 201 (257)
+++.+.+|+|.+
T Consensus 281 li~~~a~dii~~ 292 (404)
T 3ekg_A 281 LLEMGCCDIIQP 292 (404)
T ss_dssp HHHTTCCSEECC
T ss_pred HHHcCCCCeEec
Confidence 999999999986
No 172
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=98.26 E-value=2e-06 Score=73.52 Aligned_cols=85 Identities=19% Similarity=0.200 Sum_probs=68.3
Q ss_pred HHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHHHcC
Q 025135 116 GLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQALAED 194 (257)
Q Consensus 116 ~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~~g 194 (257)
..++++.+++.| +++||+........ ..... ..++.+++.+++|++++|++ ++++++.+++.|
T Consensus 34 ~~~~a~~~~~~G------ad~i~v~~~d~~~~---------~~~~~-~~i~~i~~~~~ipv~v~ggI~~~~~~~~~l~~G 97 (244)
T 1vzw_A 34 PLEAALAWQRSG------AEWLHLVDLDAAFG---------TGDNR-ALIAEVAQAMDIKVELSGGIRDDDTLAAALATG 97 (244)
T ss_dssp HHHHHHHHHHTT------CSEEEEEEHHHHHT---------SCCCH-HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTT
T ss_pred HHHHHHHHHHcC------CCEEEEecCchhhc---------CCChH-HHHHHHHHhcCCcEEEECCcCCHHHHHHHHHcC
Confidence 456789999999 99999874211100 11233 67788999999999999999 899999999987
Q ss_pred CCcEEEechHHhhCchHHHHHHc
Q 025135 195 GADLVAYGRLFISNPDLVLRFKL 217 (257)
Q Consensus 195 ~~D~V~igR~~iadP~l~~k~~~ 217 (257)
||.|.+|+.++.||+++.++.+
T Consensus 98 -ad~V~lg~~~l~~p~~~~~~~~ 119 (244)
T 1vzw_A 98 -CTRVNLGTAALETPEWVAKVIA 119 (244)
T ss_dssp -CSEEEECHHHHHCHHHHHHHHH
T ss_pred -CCEEEECchHhhCHHHHHHHHH
Confidence 9999999999999999988765
No 173
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=98.26 E-value=3e-06 Score=77.83 Aligned_cols=118 Identities=10% Similarity=0.064 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCC
Q 025135 25 DQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAID 103 (257)
Q Consensus 25 ~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~ 103 (257)
+++++.|+++.+.||+.++|+.+ | +. -.+.|++||+++ ++ .|.+..+. .
T Consensus 163 e~~~~~a~~~~~~G~~~~KiKvg----------~----~~-------------d~~~v~avr~a~-~~~~l~vDaN~--~ 212 (393)
T 1wuf_A 163 ETLLQLVNQYVDQGYERVKLKIA----------P----NK-------------DIQFVEAVRKSF-PKLSLMADANS--A 212 (393)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECB----------T----TB-------------SHHHHHHHHTTC-TTSEEEEECTT--C
T ss_pred HHHHHHHHHHHHHhhHhheeccC----------h----HH-------------HHHHHHHHHHHc-CCCEEEEECCC--C
Confidence 44667778888899999999853 1 11 247789999998 44 45444442 2
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-
Q 025135 104 HLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF- 182 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i- 182 (257)
| +.+++ ++++.|++.+ +.||+ +|-. +......+.+++.+++||++...+
T Consensus 213 ~-------~~~~a-~~~~~l~~~~------i~~iE--qP~~--------------~~d~~~~~~l~~~~~ipIa~dE~~~ 262 (393)
T 1wuf_A 213 Y-------NREDF-LLLKELDQYD------LEMIE--QPFG--------------TKDFVDHAWLQKQLKTRICLDENIR 262 (393)
T ss_dssp C-------CGGGH-HHHHTTGGGT------CSEEE--CCSC--------------SSCSHHHHHHHTTCSSEEEECTTCC
T ss_pred C-------CHHHH-HHHHHHHhCC------CeEEE--CCCC--------------CcCHHHHHHHHHhCCCCEEECCCcC
Confidence 2 34567 7889999998 88987 5521 112345567888889999988887
Q ss_pred CHHHHHHHHHcCCCcEEEec
Q 025135 183 TRELGIQALAEDGADLVAYG 202 (257)
Q Consensus 183 t~~~a~~~l~~g~~D~V~ig 202 (257)
+++++.++++.+.+|+|.+=
T Consensus 263 ~~~~~~~~i~~~a~d~v~ik 282 (393)
T 1wuf_A 263 SVKDVEQAHSIGSCRAINLK 282 (393)
T ss_dssp SHHHHHHHHHHTCCSEEEEC
T ss_pred CHHHHHHHHHhCCCCEEEeC
Confidence 89999999999999999873
No 174
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=98.26 E-value=3.3e-06 Score=71.99 Aligned_cols=85 Identities=20% Similarity=0.205 Sum_probs=68.3
Q ss_pred HHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHHHcC
Q 025135 116 GLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQALAED 194 (257)
Q Consensus 116 ~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~~g 194 (257)
..++++.+++.| +++||+..-.... . ..... ..++.+++.+++||+++|++ ++++++.+++.|
T Consensus 33 ~~~~a~~~~~~G------ad~i~v~~~d~~~-~--------~~~~~-~~i~~i~~~~~ipv~v~ggi~~~~~~~~~l~~G 96 (244)
T 2y88_A 33 AVDAALGWQRDG------AEWIHLVDLDAAF-G--------RGSNH-ELLAEVVGKLDVQVELSGGIRDDESLAAALATG 96 (244)
T ss_dssp HHHHHHHHHHTT------CSEEEEEEHHHHT-T--------SCCCH-HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTT
T ss_pred HHHHHHHHHHcC------CCEEEEEcCcccc-c--------CCChH-HHHHHHHHhcCCcEEEECCCCCHHHHHHHHHcC
Confidence 466888999999 8999987421100 0 11223 67788999999999999999 899999999987
Q ss_pred CCcEEEechHHhhCchHHHHHHc
Q 025135 195 GADLVAYGRLFISNPDLVLRFKL 217 (257)
Q Consensus 195 ~~D~V~igR~~iadP~l~~k~~~ 217 (257)
||.|.+|+.++.+|+++.++.+
T Consensus 97 -ad~V~lg~~~l~~p~~~~~~~~ 118 (244)
T 2y88_A 97 -CARVNVGTAALENPQWCARVIG 118 (244)
T ss_dssp -CSEEEECHHHHHCHHHHHHHHH
T ss_pred -CCEEEECchHhhChHHHHHHHH
Confidence 9999999999999999988765
No 175
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=98.23 E-value=4.5e-06 Score=76.17 Aligned_cols=123 Identities=7% Similarity=0.028 Sum_probs=88.9
Q ss_pred HHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhC-CC-eEEEEEccCC
Q 025135 25 DQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIG-AD-RVGVRMSPAI 102 (257)
Q Consensus 25 ~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg-~~-~v~vrls~~~ 102 (257)
+.+++.|+.+.+.||..+.|..|. .+ .+-..+.|++||+++| ++ .|.+..+.
T Consensus 164 e~~~~~a~~~~~~G~~~~K~Kvg~--------------------~~----~~~d~~~v~avr~~~g~~~~~l~vDaN~-- 217 (377)
T 2pge_A 164 AFMQEQIEAKLAEGYGCLKLKIGA--------------------ID----FDKECALLAGIRESFSPQQLEIRVDANG-- 217 (377)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEC-----------------------C----HHHHHHHHHHHHHHSCTTTCEEEEECTT--
T ss_pred HHHHHHHHHHHHHhhhhheeecCC--------------------CC----hHHHHHHHHHHHHHcCCCCceEEEECCC--
Confidence 445567777788999999998552 01 3456788999999998 75 45555542
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC
Q 025135 103 DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF 182 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i 182 (257)
.| +.+++.++++.|++.+ +.||+ +|- .+......+.+++.+++||++...+
T Consensus 218 ~~-------~~~~a~~~~~~l~~~~------i~~iE--qP~--------------~~~d~~~~~~l~~~~~ipIa~dE~~ 268 (377)
T 2pge_A 218 AF-------SPANAPQRLKRLSQFH------LHSIE--QPI--------------RQHQWSEMAALCANSPLAIALDEEL 268 (377)
T ss_dssp BB-------CTTTHHHHHHHHHTTC------CSEEE--CCB--------------CSSCHHHHHHHHHHCSSCEEESGGG
T ss_pred CC-------CHHHHHHHHHHHhcCC------CcEEE--ccC--------------CcccHHHHHHHHhhCCCcEEECCcc
Confidence 23 3466788999999998 88887 552 1122455677888889999988776
Q ss_pred -CHHH--HHHHHHcCCCcEEEec
Q 025135 183 -TREL--GIQALAEDGADLVAYG 202 (257)
Q Consensus 183 -t~~~--a~~~l~~g~~D~V~ig 202 (257)
|..+ +.++++.+.+|+|.+=
T Consensus 269 ~~~~~~~~~~~i~~~a~d~i~ik 291 (377)
T 2pge_A 269 IGLGAEQRSAMLDAIRPQYIILK 291 (377)
T ss_dssp TTCCTHHHHHHHHHHCCSEEEEC
T ss_pred CCcchHHHHHHHHhCCCCEEEEC
Confidence 6666 7799999999999873
No 176
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=98.21 E-value=1.1e-05 Score=71.96 Aligned_cols=48 Identities=19% Similarity=0.142 Sum_probs=40.7
Q ss_pred HHHHHHHHHhCCcE--EEeCCC-CHHHHHHHHHcCCCcEEEechHHh--hCchH
Q 025135 163 QLLRTWRRSYQGTF--ICSGGF-TRELGIQALAEDGADLVAYGRLFI--SNPDL 211 (257)
Q Consensus 163 ~~~~~ir~~~~~pv--i~~G~i-t~~~a~~~l~~g~~D~V~igR~~i--adP~l 211 (257)
..++.+++..++|| ++.||| |++++.++++.| ||.|++||+++ .||..
T Consensus 230 ell~~i~~~~~IPVV~VAeGGI~Tpeda~~~l~~G-aDgV~VGsaI~~a~dP~~ 282 (330)
T 2yzr_A 230 EVLLEVKKLGRLPVVNFAAGGVATPADAALMMQLG-SDGVFVGSGIFKSENPLE 282 (330)
T ss_dssp HHHHHHHHHTSCSSEEEECSCCCSHHHHHHHHHTT-CSCEEESHHHHTSSCHHH
T ss_pred HHHHHHHHhCCCCeEEEEECCCCCHHHHHHHHHcC-cCEEeeHHHHhcCCCHHH
Confidence 45566777788997 689999 899999999996 99999999999 56744
No 177
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=98.20 E-value=1.3e-05 Score=74.83 Aligned_cols=119 Identities=12% Similarity=0.127 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHH-cCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCC
Q 025135 25 DQYRQAALNAIQ-AGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAI 102 (257)
Q Consensus 25 ~~f~~AA~~a~~-aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~ 102 (257)
+++++.|+.+.+ .||..+.|+.|.. +++ --.+.|++||+++ ++ .|.+..+.
T Consensus 193 e~~~~~a~~~~~~~Gf~~~KlKvG~~--------------------~~~----~Di~~v~avRea~-~~~~L~vDaN~-- 245 (445)
T 3va8_A 193 EGVVKQAKKIIDEYGFKAIKLKGGVF--------------------PPA----DEVAAIKALHKAF-PGVPLRLDPNA-- 245 (445)
T ss_dssp HHHHHHHHHHHHHHCCSCEEEECSSS--------------------CHH----HHHHHHHHHHHHS-TTCCEEEECTT--
T ss_pred HHHHHHHHHHHHhcCCCEEEEccCCC--------------------CHH----HHHHHHHHHHHhC-CCCcEeeeCCC--
Confidence 455666777766 4999999987641 122 2357899999999 55 56666553
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC
Q 025135 103 DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF 182 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i 182 (257)
. .+.++++++++.|++. +.|++ +|. + ....++.+++.+++||.+...+
T Consensus 246 ~-------w~~~~Ai~~~~~L~~~-------l~~iE--eP~---------------~-d~~~~~~l~~~~~iPIa~dE~~ 293 (445)
T 3va8_A 246 A-------WTVETSKWVAKELEGI-------VEYLE--DPA---------------G-EIEGMAAVAKEASMPLATNMAV 293 (445)
T ss_dssp C-------BCHHHHHHHHHHTTTT-------CSEEE--SCB---------------S-HHHHHHHHHTTCSSCEEESSSC
T ss_pred C-------CCHHHHHHHHHHHhhh-------cCeEe--ecC---------------c-CHHHHHHHHHcCCCCEEeCCcc
Confidence 2 3578899999999876 46776 551 1 2456678999999999887777
Q ss_pred -CHHHHHHHHHcCCCcEEEec
Q 025135 183 -TRELGIQALAEDGADLVAYG 202 (257)
Q Consensus 183 -t~~~a~~~l~~g~~D~V~ig 202 (257)
+++++.++++.+.+|+|.+-
T Consensus 294 ~~~~~~~~~i~~~a~div~~d 314 (445)
T 3va8_A 294 VAFDHLPPSILQDAVQVILSD 314 (445)
T ss_dssp CSGGGHHHHHHTTCCSEEEEC
T ss_pred CCHHHHHHHHHcCCCCEEEec
Confidence 89999999999999999873
No 178
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Probab=98.18 E-value=1.6e-05 Score=74.34 Aligned_cols=119 Identities=18% Similarity=0.156 Sum_probs=88.2
Q ss_pred HHHHHHHHHHHH-cCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCC
Q 025135 25 DQYRQAALNAIQ-AGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAI 102 (257)
Q Consensus 25 ~~f~~AA~~a~~-aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~ 102 (257)
+++++.|+.+.+ .||..+.|..|.. +++ --.+.|++||+++ ++ .|.+..|.
T Consensus 195 e~~~~~a~~~~~~~Gf~~~KlKvG~~--------------------~~~----~Di~~v~avRea~-~d~~L~vDaN~-- 247 (445)
T 3vdg_A 195 DGIVAQARRMIDEYGFSAIKLKGGVF--------------------APE----EEMAAVEALRAAF-PDHPLRLDPNA-- 247 (445)
T ss_dssp HHHHHHHHHHHHHHCCSSEEEECSSS--------------------CHH----HHHHHHHHHHHHC-TTSCEEEECTT--
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCCC--------------------CHH----HHHHHHHHHHHhC-CCCcEEEECCC--
Confidence 455667777776 5999999986540 122 2357899999999 65 56666553
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC
Q 025135 103 DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF 182 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i 182 (257)
. .+.++++++++.|++. +.|++ +|. . ....++.+++.+++||.+...+
T Consensus 248 ~-------w~~~~Ai~~~~~L~~~-------l~~iE--eP~--------------~--~~~~~~~l~~~~~iPIa~dE~~ 295 (445)
T 3vdg_A 248 A-------WTPQTSVKVAAGLEGV-------LEYLE--DPT--------------P--GLDGMAEVAAQAPMPLATNMCV 295 (445)
T ss_dssp C-------SCHHHHHHHHHHTTTT-------CSEEE--CCS--------------S--SHHHHHHHHHHCSSCEEESSSC
T ss_pred C-------CCHHHHHHHHHHHhhH-------HHeee--CCC--------------C--CHHHHHHHHhcCCCCEEcCCcC
Confidence 2 3578899999999875 46776 551 1 1345677999999999887777
Q ss_pred -CHHHHHHHHHcCCCcEEEec
Q 025135 183 -TRELGIQALAEDGADLVAYG 202 (257)
Q Consensus 183 -t~~~a~~~l~~g~~D~V~ig 202 (257)
++.++.++|+.+.+|+|.+-
T Consensus 296 ~~~~~~~~~l~~~a~div~~d 316 (445)
T 3vdg_A 296 VAFDQLPAAVAKNSVQVVLSD 316 (445)
T ss_dssp CSGGGHHHHHHHTCCSEEEEC
T ss_pred CCHHHHHHHHHcCCCCEEeeC
Confidence 89999999999999999873
No 179
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=98.17 E-value=9.8e-05 Score=64.10 Aligned_cols=164 Identities=14% Similarity=0.095 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHcCCCEEEecccccchhhhcCCCCc--------CCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEE-
Q 025135 26 QYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGI--------NDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGV- 96 (257)
Q Consensus 26 ~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~--------N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~v- 96 (257)
...+.++...++|+|+|||..-. ..|.. +.|.=+.|- +.+-++++++++|+.+++-|+.+
T Consensus 32 ~~~~~~~~l~~~G~D~IElG~P~-------sdP~adgp~i~~a~~~al~~G~----~~~~~~~~v~~ir~~~~~~Pi~~m 100 (262)
T 2ekc_A 32 TSLKAFKEVLKNGTDILEIGFPF-------SDPVADGPTIQVAHEVALKNGI----RFEDVLELSETLRKEFPDIPFLLM 100 (262)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCC-------SCCTTSCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHCTTSCEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECCCC-------CCcccccHHHHHHHHHHHHcCC----CHHHHHHHHHHHHhhcCCCCEEEE
Confidence 45667777889999999994321 11210 011111121 23457899999999874446555
Q ss_pred -EEccC--------------CCCCCC-CCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcc----------cCCC-
Q 025135 97 -RMSPA--------------IDHLDA-TDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYT----------AYGQ- 149 (257)
Q Consensus 97 -rls~~--------------~~~~~~-~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~----------~~~~- 149 (257)
-.++. .+.++. -...+.++...+.+.+.+.| ++.+.+..+... ..++
T Consensus 101 ~y~n~v~~~g~~~f~~~~~~aG~dgvii~dl~~ee~~~~~~~~~~~g------l~~i~l~~p~t~~~rl~~ia~~a~gfi 174 (262)
T 2ekc_A 101 TYYNPIFRIGLEKFCRLSREKGIDGFIVPDLPPEEAEELKAVMKKYV------LSFVPLGAPTSTRKRIKLICEAADEMT 174 (262)
T ss_dssp CCHHHHHHHCHHHHHHHHHHTTCCEEECTTCCHHHHHHHHHHHHHTT------CEECCEECTTCCHHHHHHHHHHCSSCE
T ss_pred ecCcHHHHhhHHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHcC------CcEEEEeCCCCCHHHHHHHHHhCCCCE
Confidence 22210 011111 11234566777777788887 554443333210 0000
Q ss_pred ---cCC---CCCCC-c-hhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhC
Q 025135 150 ---TES---GRPGT-E-DEEAQLLRTWRRSYQGTFICSGGF-TRELGIQALAEDGADLVAYGRLFISN 208 (257)
Q Consensus 150 ---~~~---~~~~~-~-~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~iad 208 (257)
+.. |.... . ......++.+|+..+.||++.+|+ |++++.+ +..+ +|.|.+|++++..
T Consensus 175 y~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~~~pv~vG~GI~t~e~~~~-~~~g-ADgvIVGSai~~~ 240 (262)
T 2ekc_A 175 YFVSVTGTTGAREKLPYERIKKKVEEYRELCDKPVVVGFGVSKKEHARE-IGSF-ADGVVVGSALVKL 240 (262)
T ss_dssp EEESSCC---------CHHHHHHHHHHHHHCCSCEEEESSCCSHHHHHH-HHTT-SSEEEECHHHHHH
T ss_pred EEEecCCccCCCCCcCcccHHHHHHHHHhhcCCCEEEeCCCCCHHHHHH-HHcC-CCEEEECHHHHhh
Confidence 000 10001 1 222357788999889999999999 7999999 7777 9999999999864
No 180
>4h2h_A Mandelate racemase/muconate lactonizing enzyme; enolase, mandelate racemase subgroup, enzyme function initia EFI, structural genomics; HET: 0XW; 1.70A {Pelagibaca bermudensis} PDB: 2pmq_A*
Probab=98.17 E-value=3.7e-05 Score=70.06 Aligned_cols=118 Identities=14% Similarity=0.117 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHh-CCC-eEEEEEccCCC
Q 025135 26 QYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAI-GAD-RVGVRMSPAID 103 (257)
Q Consensus 26 ~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~v-g~~-~v~vrls~~~~ 103 (257)
+.++.|+.+.+.||..+.|+.|.. . .+.-.+.|++||+++ |++ .|.+..+. .
T Consensus 153 ~~~~~a~~~~~~G~~~~KiKvg~~--------------------~----~~~di~~v~~vr~a~~g~~~~l~vDaN~--~ 206 (376)
T 4h2h_A 153 EAARQALEKQREGYSRLQVKLGAR--------------------P----IEIDIEAIRKVWEAVRGTGIALAADGNR--G 206 (376)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCSS--------------------C----HHHHHHHHHHHHHHHTTSCCEEEEECTT--C
T ss_pred HHHHHHHHHHhcCceEEEEecCCC--------------------C----HHHHHHHHHHHHhhccCCeeEEEEeecc--C
Confidence 445566777789999999987641 1 223467899999998 665 45555442 2
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-
Q 025135 104 HLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF- 182 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i- 182 (257)
.+.++++++++.|++.+ + |++ +|- .+ .+.++.+++..++||.+...+
T Consensus 207 -------~~~~~A~~~~~~l~~~~------~-~iE--eP~--------------~~--~~~~~~l~~~~~~pia~dE~~~ 254 (376)
T 4h2h_A 207 -------WTTRDALRFSRECPDIP------F-VME--QPC--------------NS--FEDLEAIRPLCHHALYMDEDGT 254 (376)
T ss_dssp -------CCHHHHHHHHHHCTTSC------E-EEE--SCS--------------SS--HHHHHHHGGGCCSCEEESTTCC
T ss_pred -------CCHHHHHHHHHHHhhcc------c-ccc--CCc--------------ch--hhhHhhhhhcccCccccCcccC
Confidence 35788999999998876 6 665 551 11 234567888999999887777
Q ss_pred CHHHHHHHHHcCCCcEEEe
Q 025135 183 TRELGIQALAEDGADLVAY 201 (257)
Q Consensus 183 t~~~a~~~l~~g~~D~V~i 201 (257)
+.+++.++++.+.+|+|.+
T Consensus 255 ~~~~~~~~~~~~~~d~v~~ 273 (376)
T 4h2h_A 255 SLNTVITAAATSLVDGFGM 273 (376)
T ss_dssp SHHHHHHHHHTTCCSEECC
T ss_pred CHHHHHHHHHhhccCcccc
Confidence 8999999999999999875
No 181
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=98.14 E-value=1.7e-05 Score=72.76 Aligned_cols=121 Identities=13% Similarity=0.123 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAI 102 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~ 102 (257)
.+++++.|+.+.+.||..+.|+.+- . . -.+.|++||+++ ++ .|.+..+.
T Consensus 150 ~e~~~~~~~~~~~~G~~~~K~Kv~~----------~----~-------------d~~~v~avR~~~-~~~~l~vDaN~-- 199 (388)
T 3qld_A 150 LDVLIQSVDAAVEQGFRRVKLKIAP----------G----R-------------DRAAIKAVRLRY-PDLAIAADANG-- 199 (388)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECBT----------T----B-------------SHHHHHHHHHHC-TTSEEEEECTT--
T ss_pred HHHHHHHHHHHHHhCCCeEEEEeCc----------H----H-------------HHHHHHHHHHHC-CCCeEEEECCC--
Confidence 4666777788888999999998642 0 1 247799999999 54 45444442
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC
Q 025135 103 DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF 182 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i 182 (257)
.| +.+++.. ++.|++.+ +.|++ +|- .+.....++.+++.+++||.+...+
T Consensus 200 ~~-------~~~~A~~-~~~l~~~~------i~~iE--eP~--------------~~~d~~~~~~l~~~~~ipIa~dE~~ 249 (388)
T 3qld_A 200 SY-------RPEDAPV-LRQLDAYD------LQFIE--QPL--------------PEDDWFDLAKLQASLRTPVCLDESV 249 (388)
T ss_dssp CC-------CGGGHHH-HHHGGGGC------CSCEE--CCS--------------CTTCHHHHHHHHHHCSSCEEESTTC
T ss_pred CC-------ChHHHHH-HHHHhhCC------CcEEE--CCC--------------CcccHHHHHHHHHhCCCCEEeCCCC
Confidence 22 3455665 78899988 88887 552 1223456677899999999988887
Q ss_pred -CHHHHHHHHHcCCCcEEEechH
Q 025135 183 -TRELGIQALAEDGADLVAYGRL 204 (257)
Q Consensus 183 -t~~~a~~~l~~g~~D~V~igR~ 204 (257)
+++++.++++.+.+|+|.+==.
T Consensus 250 ~~~~~~~~~~~~~a~d~v~~k~~ 272 (388)
T 3qld_A 250 RSVRELKLTARLGAARVLNVKPG 272 (388)
T ss_dssp CSHHHHHHHHHHTCCSEEEECHH
T ss_pred CCHHHHHHHHHcCCCCEEEECch
Confidence 8999999999999999987533
No 182
>3fxg_A Rhamnonate dehydratase; structural gemomics, enolase superfamily, NYSGXRC, target 9265J, lyase, structural genomics, PSI-2; 1.90A {Gibberella zeae ph-1} PDB: 2p0i_A
Probab=98.14 E-value=1.3e-05 Score=74.92 Aligned_cols=119 Identities=13% Similarity=0.118 Sum_probs=86.3
Q ss_pred HHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCCCCCCCCCCc
Q 025135 34 AIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAIDHLDATDSDP 112 (257)
Q Consensus 34 a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~~~~~~~~~~ 112 (257)
+++.||..+.|+.+.+ |. .| ..+.+--.+.|++||+++|++ .|.+..+.. .+
T Consensus 176 ~~~~Gf~~~KlKv~~~--------~~-------~G---~~~~~~di~rv~avRea~G~d~~L~vDaN~~---------wt 228 (455)
T 3fxg_A 176 AKAMGFWGGKVPLPFC--------PD-------DG---HEGLRKNVEFLRKHREAVGPDFPIMVDCYMS---------LN 228 (455)
T ss_dssp HHHHTCSCEEEECCCC--------GG-------GH---HHHHHHHHHHHHHHHHHHCSSSCEEEECTTC---------CC
T ss_pred HHHcCCCEEEEcCCCC--------cc-------cc---cccHHHHHHHHHHHHHHhCCCCeEEEeCCCC---------CC
Confidence 4567999998876431 10 01 123456778899999999987 576666531 35
Q ss_pred HHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhC-CcEEEeCCC-CHHHHHHH
Q 025135 113 LGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQ-GTFICSGGF-TRELGIQA 190 (257)
Q Consensus 113 ~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~G~i-t~~~a~~~ 190 (257)
.++++++++.|++.+ +.|++ +|- .+.....++.+++.+. +||.+...+ ++.++.++
T Consensus 229 ~~~Ai~~~~~Le~~~------l~~iE--EPl--------------~~dd~~~la~L~~~~~~iPIA~gEs~~s~~d~~~l 286 (455)
T 3fxg_A 229 VSYTIELVKACLDLN------INWWE--ECL--------------SPDDTDGFALIKRAHPTVKFTTGEHEYSRYGFRKL 286 (455)
T ss_dssp HHHHHHHHHHTGGGC------CSEEE--CCS--------------CGGGGGGHHHHHHHCTTSEEEECTTCCHHHHHHHH
T ss_pred HHHHHHHHHhcccCC------cceec--CCC--------------CcchHHHHHHHHHhCCCCeEECCCccCCHHHHHHH
Confidence 788999999999999 88887 552 2223345567888774 677777677 89999999
Q ss_pred HHcCCCcEEEe
Q 025135 191 LAEDGADLVAY 201 (257)
Q Consensus 191 l~~g~~D~V~i 201 (257)
++.+.+|+|.+
T Consensus 287 i~~~avDiiq~ 297 (455)
T 3fxg_A 287 VEGRNLDIIQP 297 (455)
T ss_dssp HTTCCCSEECC
T ss_pred HHcCCCCEEEE
Confidence 99999999986
No 183
>3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A
Probab=98.11 E-value=2.4e-05 Score=73.00 Aligned_cols=119 Identities=15% Similarity=0.097 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHH-cCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCC
Q 025135 25 DQYRQAALNAIQ-AGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAI 102 (257)
Q Consensus 25 ~~f~~AA~~a~~-aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~ 102 (257)
+++++.|+.+.+ .||..+.|..|.. +++ --.+.|++||+++ ++ .|.+..|.
T Consensus 190 e~~~~~a~~~~~~~Gf~~~KlKvG~~--------------------~~~----~Di~rv~avRea~-pd~~L~vDaN~-- 242 (441)
T 3vc5_A 190 DGIVAQARLLIGEYGFRSIKLKGGVF--------------------PPE----QEAEAIQALRDAF-PGLPLRLDPNA-- 242 (441)
T ss_dssp HHHHHHHHHHHHHHCCSSEEEECSSS--------------------CHH----HHHHHHHHHHHHS-TTCCEEEECTT--
T ss_pred HHHHHHHHHHHHhcCCCEEEEccCCC--------------------CHH----HHHHHHHHHHHhC-CCCcEeccCCC--
Confidence 455666777766 5999999987641 122 2357899999999 55 56665553
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC
Q 025135 103 DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF 182 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i 182 (257)
. .+.++++++++.|++. +.|++ +|. . ....++.+++.+++||.+...+
T Consensus 243 ~-------w~~~~Ai~~~~~L~~~-------l~~iE--eP~--------------~--~~~~~~~l~~~~~iPIa~dE~~ 290 (441)
T 3vc5_A 243 A-------WTVETSIRVGRALDGV-------LEYLE--DPT--------------P--GIDGMARVAAEVPMPLATNMCV 290 (441)
T ss_dssp C-------SCHHHHHHHHHHTTTT-------CSEEE--CCS--------------S--SHHHHHHHHTTSSSCEEESSSC
T ss_pred C-------CCHHHHHHHHHHHHHH-------HHHhh--ccC--------------C--CHHHHHHHHhcCCCCEEeCCCC
Confidence 2 3578899999999875 46776 651 1 1345677999999999887777
Q ss_pred -CHHHHHHHHHcCCCcEEEec
Q 025135 183 -TRELGIQALAEDGADLVAYG 202 (257)
Q Consensus 183 -t~~~a~~~l~~g~~D~V~ig 202 (257)
+..++.++++.+.+|+|.+-
T Consensus 291 ~~~~~~~~~l~~~a~dii~~d 311 (441)
T 3vc5_A 291 VTPEHLPAAVERRPIGVLLID 311 (441)
T ss_dssp CSGGGHHHHHHHCCCSEEEEC
T ss_pred CCHHHHHHHHHhCCCCEEeec
Confidence 89999999999999999873
No 184
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=98.10 E-value=3.8e-05 Score=63.87 Aligned_cols=54 Identities=17% Similarity=0.139 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHhCCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCchHHHHH
Q 025135 161 EAQLLRTWRRSYQGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNPDLVLRF 215 (257)
Q Consensus 161 ~~~~~~~ir~~~~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~ 215 (257)
.+..++.+++.+++||++.||++++++.++++.| +|.|.+|+++...||..+++
T Consensus 150 ~~~~l~~l~~~~~~pvia~GGI~~~nv~~~~~~G-a~gv~vgs~i~~~~d~~~~~ 203 (215)
T 1xi3_A 150 GLEGLRKIVESVKIPVVAIGGINKDNAREVLKTG-VDGIAVISAVMGAEDVRKAT 203 (215)
T ss_dssp HHHHHHHHHHHCSSCEEEESSCCTTTHHHHHTTT-CSEEEESHHHHTSSSHHHHH
T ss_pred CHHHHHHHHHhCCCCEEEECCcCHHHHHHHHHcC-CCEEEEhHHHhCCCCHHHHH
Confidence 3456677888889999999999999999988766 99999999999877654343
No 185
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=98.09 E-value=1.9e-06 Score=75.02 Aligned_cols=83 Identities=8% Similarity=-0.000 Sum_probs=59.2
Q ss_pred HHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh----CCcEEEeCCC-CHHHHHHHHH
Q 025135 118 AVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY----QGTFICSGGF-TRELGIQALA 192 (257)
Q Consensus 118 ~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~----~~pvi~~G~i-t~~~a~~~l~ 192 (257)
++++.++++ + +.+.++....++.. ....++.++.+++.+ ++|||++||+ +++++.++++
T Consensus 162 e~a~~~~~~-a------~~il~t~i~~dG~~---------~G~d~eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~l~~ 225 (260)
T 2agk_A 162 DTFRELRKY-T------NEFLIHAADVEGLC---------GGIDELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDE 225 (260)
T ss_dssp HHHHHHTTT-C------SEEEEEC----------------CCCCHHHHHHHHHHHTTCSSCEEEEESCCCCTHHHHHHHH
T ss_pred HHHHHHHHh-c------CEEEEEeeccccCc---------CCCCHHHHHHHHHhhcccCCceEEEeCCCCCHHHHHHHHH
Confidence 677888776 3 44545443222211 112457888899999 9999999999 9999999998
Q ss_pred cC-CCcEEEechHH--hhCc-hHHHHHH
Q 025135 193 ED-GADLVAYGRLF--ISNP-DLVLRFK 216 (257)
Q Consensus 193 ~g-~~D~V~igR~~--iadP-~l~~k~~ 216 (257)
.+ ++|.|++||++ ..+| ..+.+++
T Consensus 226 ~~~G~~gvivg~al~l~~g~~~~~~~~~ 253 (260)
T 2agk_A 226 LSHGKVDLTFGSSLDIFGGNLVKFEDCC 253 (260)
T ss_dssp HHTTCEEEECCTTBGGGTCSSBCHHHHH
T ss_pred hcCCCCEEEeeCCHHHcCCCCCCHHHHH
Confidence 84 59999999997 8888 6666654
No 186
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=98.09 E-value=6.3e-05 Score=65.39 Aligned_cols=101 Identities=13% Similarity=0.046 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHhCCC-eEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCC
Q 025135 78 LMQLVREVIVAIGAD-RVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPG 156 (257)
Q Consensus 78 ~~eiv~aiR~~vg~~-~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~ 156 (257)
..++++++|+.+++. .++.-..+ +.+ .++.+++.| .+|| ++........ . .
T Consensus 112 ~~~~~~~a~~~~~~g~~vi~~~~~-----------~~~----~a~~~~~~g------ad~v-~~~~~~~Gt~---~---~ 163 (264)
T 1xm3_A 112 PVETLKASEQLLEEGFIVLPYTSD-----------DVV----LARKLEELG------VHAI-MPGASPIGSG---Q---G 163 (264)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECS-----------CHH----HHHHHHHHT------CSCB-EECSSSTTCC---C---C
T ss_pred hHHHHHHHHHHHCCCeEEEEEcCC-----------CHH----HHHHHHHhC------CCEE-EECCcccCCC---C---C
Confidence 457788888887765 34322221 222 356677788 7777 3311111100 0 0
Q ss_pred CchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCc
Q 025135 157 TEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQALAEDGADLVAYGRLFISNP 209 (257)
Q Consensus 157 ~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~iadP 209 (257)
.. ....++.+++..++||++.||| +++++.++++.| +|.|.+|++++.-+
T Consensus 164 ~~--~~~~l~~i~~~~~iPviv~gGI~t~eda~~~~~~G-AdgViVGSAi~~a~ 214 (264)
T 1xm3_A 164 IL--NPLNLSFIIEQAKVPVIVDAGIGSPKDAAYAMELG-ADGVLLNTAVSGAD 214 (264)
T ss_dssp CS--CHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHTT-CSEEEESHHHHTSS
T ss_pred CC--CHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHcC-CCEEEEcHHHhCCC
Confidence 11 1346777888889999999999 799999999988 99999999999543
No 187
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=98.08 E-value=7.7e-05 Score=63.90 Aligned_cols=131 Identities=10% Similarity=0.082 Sum_probs=90.7
Q ss_pred HHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCC
Q 025135 28 RQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDA 107 (257)
Q Consensus 28 ~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~ 107 (257)
+..++.|.+.|+|.|+++.--|.|.+ .+..++++=|++|+++++.. .+|+=....+
T Consensus 98 v~Ea~~Ai~~GAdEIDmViNig~lk~-------------------g~~~~v~~eI~~v~~a~~~~--~lKVIlEt~~--- 153 (239)
T 3ngj_A 98 AYETKVAVEQGAEEVDMVINIGMVKA-------------------KKYDDVEKDVKAVVDASGKA--LTKVIIECCY--- 153 (239)
T ss_dssp HHHHHHHHHTTCSEEEEECCHHHHHT-------------------TCHHHHHHHHHHHHHHHTTS--EEEEECCGGG---
T ss_pred HHHHHHHHHcCCCEEEEEeehHHhcc-------------------ccHHHHHHHHHHHHHHhcCC--ceEEEEecCC---
Confidence 55677888999999999876665532 23457888899999999753 3444222122
Q ss_pred CCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhC--CcEEEeCCC-CH
Q 025135 108 TDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQ--GTFICSGGF-TR 184 (257)
Q Consensus 108 ~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~--~pvi~~G~i-t~ 184 (257)
.+.++....|+...++| +|||..+.+ |.. .....+.++.+|+.++ ++|-++||+ |.
T Consensus 154 ---Lt~eei~~a~~ia~~aG------ADfVKTSTG-f~~-----------ggAt~~dv~lmr~~vg~~v~VKasGGIrt~ 212 (239)
T 3ngj_A 154 ---LTNEEKVEVCKRCVAAG------AEYVKTSTG-FGT-----------HGATPEDVKLMKDTVGDKALVKAAGGIRTF 212 (239)
T ss_dssp ---SCHHHHHHHHHHHHHHT------CSEEECCCS-SSS-----------CCCCHHHHHHHHHHHGGGSEEEEESSCCSH
T ss_pred ---CCHHHHHHHHHHHHHHC------cCEEECCCC-CCC-----------CCCCHHHHHHHHHhhCCCceEEEeCCCCCH
Confidence 24566777888889999 999987643 211 1112234455666654 679999999 89
Q ss_pred HHHHHHHHcCCCcEEEechH
Q 025135 185 ELGIQALAEDGADLVAYGRL 204 (257)
Q Consensus 185 ~~a~~~l~~g~~D~V~igR~ 204 (257)
+++.++|+.| ++-++..++
T Consensus 213 ~da~~~i~aG-A~riGtS~~ 231 (239)
T 3ngj_A 213 DDAMKMINNG-ASRIGASAG 231 (239)
T ss_dssp HHHHHHHHTT-EEEEEESCH
T ss_pred HHHHHHHHhc-ccceecccH
Confidence 9999999998 997766554
No 188
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=98.08 E-value=0.00016 Score=62.45 Aligned_cols=133 Identities=14% Similarity=0.098 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHH-c-CCCEEEe--cccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCe-EEEEEc
Q 025135 25 DQYRQAALNAIQ-A-GFDGIEI--HGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADR-VGVRMS 99 (257)
Q Consensus 25 ~~f~~AA~~a~~-a-GfDgVEI--h~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~-v~vrls 99 (257)
++=++.|+.|.| + |-|.|+| ++-+-||+. =..+.+++.++.+.... +..-..
T Consensus 87 ~eAv~~a~lare~~~~~~~iKlEv~~d~~~llp-----------------------D~~~tv~aa~~L~~~Gf~Vlpy~~ 143 (265)
T 1wv2_A 87 VEAVRTCRLARELLDGHNLVKLEVLADQKTLFP-----------------------NVVETLKAAEQLVKDGFDVMVYTS 143 (265)
T ss_dssp HHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCB-----------------------CHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCCeEEEEeecCccccCc-----------------------CHHHHHHHHHHHHHCCCEEEEEeC
Confidence 455778888888 5 5788865 444422211 15577788887776543 331233
Q ss_pred cCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEe
Q 025135 100 PAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICS 179 (257)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~ 179 (257)
. + ..++++|+++| .+++... +.. .+ ++. +. ...++++.+++..++|||+.
T Consensus 144 d-----------d----~~~akrl~~~G------~~aVmPl-g~p--IG---sG~-Gi--~~~~lI~~I~e~~~vPVI~e 193 (265)
T 1wv2_A 144 D-----------D----PIIARQLAEIG------CIAVMPL-AGL--IG---SGL-GI--CNPYNLRIILEEAKVPVLVD 193 (265)
T ss_dssp S-----------C----HHHHHHHHHSC------CSEEEEC-SSS--TT---CCC-CC--SCHHHHHHHHHHCSSCBEEE
T ss_pred C-----------C----HHHHHHHHHhC------CCEEEeC-Ccc--CC---CCC-Cc--CCHHHHHHHHhcCCCCEEEe
Confidence 2 2 35789999999 6777321 111 11 110 01 12467788999889999999
Q ss_pred CCC-CHHHHHHHHHcCCCcEEEechHHhh--CchH
Q 025135 180 GGF-TRELGIQALAEDGADLVAYGRLFIS--NPDL 211 (257)
Q Consensus 180 G~i-t~~~a~~~l~~g~~D~V~igR~~ia--dP~l 211 (257)
||| |++++..+++-| ||.|.+|.+... ||..
T Consensus 194 GGI~TPsDAa~AmeLG-AdgVlVgSAI~~a~dP~~ 227 (265)
T 1wv2_A 194 AGVGTASDAAIAMELG-CEAVLMNTAIAHAKDPVM 227 (265)
T ss_dssp SCCCSHHHHHHHHHHT-CSEEEESHHHHTSSSHHH
T ss_pred CCCCCHHHHHHHHHcC-CCEEEEChHHhCCCCHHH
Confidence 999 999999999998 999999999974 6753
No 189
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=98.08 E-value=0.00014 Score=63.76 Aligned_cols=134 Identities=16% Similarity=0.114 Sum_probs=89.7
Q ss_pred HHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCC
Q 025135 28 RQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDA 107 (257)
Q Consensus 28 ~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~ 107 (257)
+..++.|.+.|+|.|+++.--|.|.+ ++...+.+-|++|+++++. + .+|+=....+
T Consensus 129 v~Ea~~Ai~~GAdEIDmVINig~lk~-------------------g~~~~v~~eI~~V~~a~~~-~-~lKVIlEt~~--- 184 (288)
T 3oa3_A 129 VSEAKRAMQNGASELDMVMNYPWLSE-------------------KRYTDVFQDIRAVRLAAKD-A-ILKVILETSQ--- 184 (288)
T ss_dssp HHHHHHHHHTTCSEEEEECCHHHHHT-------------------TCHHHHHHHHHHHHHHTTT-S-EEEEECCGGG---
T ss_pred HHHHHHHHHcCCCEEEEEeehhhhcC-------------------CcHHHHHHHHHHHHHHhcC-C-CceEEEECCC---
Confidence 55677888999999998766554432 2345788889999999976 3 2454432222
Q ss_pred CCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHH--hCCcEEEeCCC-CH
Q 025135 108 TDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRS--YQGTFICSGGF-TR 184 (257)
Q Consensus 108 ~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~--~~~pvi~~G~i-t~ 184 (257)
.+.++....|+...++| .|||-.+.+ |...+ ........++++.+. -+++|.+.||+ |.
T Consensus 185 ---Lt~eei~~A~~ia~eaG------ADfVKTSTG-f~~~G--------AT~edv~lmr~~v~~~g~~v~VKAAGGIrt~ 246 (288)
T 3oa3_A 185 ---LTADEIIAGCVLSSLAG------ADYVKTSTG-FNGPG--------ASIENVSLMSAVCDSLQSETRVKASGGIRTI 246 (288)
T ss_dssp ---CCHHHHHHHHHHHHHTT------CSEEECCCS-SSSCC--------CCHHHHHHHHHHHHHSSSCCEEEEESSCCSH
T ss_pred ---CCHHHHHHHHHHHHHcC------CCEEEcCCC-CCCCC--------CCHHHHHHHHHHHHHhCCCceEEEeCCCCCH
Confidence 23556667888889999 999987632 22111 122233444444332 35789999999 89
Q ss_pred HHHHHHHHcCCCcEEEechH
Q 025135 185 ELGIQALAEDGADLVAYGRL 204 (257)
Q Consensus 185 ~~a~~~l~~g~~D~V~igR~ 204 (257)
++|.++|+.| ++-++...+
T Consensus 247 edAl~mi~aG-A~RiGtS~g 265 (288)
T 3oa3_A 247 EDCVKMVRAG-AERLGASAG 265 (288)
T ss_dssp HHHHHHHHTT-CSEEEESCH
T ss_pred HHHHHHHHcC-CceeehhhH
Confidence 9999999998 996666544
No 190
>3mzn_A Glucarate dehydratase; lyase, structural genomics, protein structure initiative, PS nysgrc; 1.85A {Chromohalobacter salexigens} PDB: 3nfu_A
Probab=98.05 E-value=5.5e-05 Score=70.69 Aligned_cols=126 Identities=13% Similarity=0.068 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHHH-cCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCC
Q 025135 24 IDQYRQAALNAIQ-AGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAI 102 (257)
Q Consensus 24 i~~f~~AA~~a~~-aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~ 102 (257)
.+++++.|+.+.+ .||..++|..|.. +++ --.+.|++||+++++-.|.+..+.
T Consensus 183 ~e~~~~~a~~~~~~~Gf~~~KlKvG~~--------------------~~~----~Di~~v~avRea~pd~~L~vDaN~-- 236 (450)
T 3mzn_A 183 PEAVANLARAAYDRYGFKDFKLKGGVL--------------------RGE----EEADCIRALHEAFPEARLALDPNG-- 236 (450)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEECSSS--------------------CHH----HHHHHHHHHHHHCTTSEEEEECTT--
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCCC--------------------CHH----HHHHHHHHHHHhCCCCeEEEECCC--
Confidence 4566777777776 6999999987641 112 235779999999742245555543
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC
Q 025135 103 DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF 182 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i 182 (257)
. .+.++++++++.|++. +.||+ +|..... .......++.+++.+++||.+...+
T Consensus 237 ~-------w~~~~A~~~~~~L~~~-------i~~iE--eP~~~~d----------~~~~~~~~~~l~~~~~iPIa~dE~~ 290 (450)
T 3mzn_A 237 A-------WKLDEAVRVLEPIKHL-------LSYAE--DPCGQEG----------GFSGRETMAEFKKRTGLPTATNMIA 290 (450)
T ss_dssp C-------BCHHHHHHHHGGGGGG-------CSEEE--SSBCCBT----------TBCHHHHHHHHHHHHCCCEEESSSS
T ss_pred C-------CCHHHHHHHHHHhhhc-------cceee--CCCCccc----------ccchHHHHHHHHHhcCCCEEeCCcc
Confidence 2 3578899999999875 56776 6521000 0001345678999999999886656
Q ss_pred -CHHHHHHHHHcCCCcEEEe
Q 025135 183 -TRELGIQALAEDGADLVAY 201 (257)
Q Consensus 183 -t~~~a~~~l~~g~~D~V~i 201 (257)
+..++.++++.+.+|+|.+
T Consensus 291 ~~~~~~~~~i~~~a~di~~~ 310 (450)
T 3mzn_A 291 TDYKQLQYAVQLNSVDIPLA 310 (450)
T ss_dssp SSHHHHHHHHHHTCCSEEBC
T ss_pred CCHHHHHHHHHcCCCCEEEe
Confidence 7889999999999999854
No 191
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=98.03 E-value=4.1e-05 Score=64.12 Aligned_cols=126 Identities=19% Similarity=0.229 Sum_probs=77.5
Q ss_pred HHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCCCC
Q 025135 31 ALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDATDS 110 (257)
Q Consensus 31 A~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~ 110 (257)
.+.+.++|.|+|.+|+..+ ....++++++++. |. .+++=+++.
T Consensus 77 i~~~~~~gad~v~vh~~~~--------------------------~~~~~~~~~~~~~-g~-~i~~~~~~~--------- 119 (220)
T 2fli_A 77 VEAFAQAGADIMTIHTEST--------------------------RHIHGALQKIKAA-GM-KAGVVINPG--------- 119 (220)
T ss_dssp HHHHHHHTCSEEEEEGGGC--------------------------SCHHHHHHHHHHT-TS-EEEEEECTT---------
T ss_pred HHHHHHcCCCEEEEccCcc--------------------------ccHHHHHHHHHHc-CC-cEEEEEcCC---------
Confidence 4777889999999997651 1244566777653 42 566656432
Q ss_pred CcHHHHHHHHHHHHhcCCccCCceeEEEe--eCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh-----CCcEEEeCCCC
Q 025135 111 DPLGLGLAVIQGLNKLQIDQGAKLTYLHV--TQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY-----QGTFICSGGFT 183 (257)
Q Consensus 111 ~~~~~~~~l~~~L~~~G~~~~~~vd~i~v--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~-----~~pvi~~G~it 183 (257)
.+.+. ++.+. .+ +||+-+ ..+.+.+.. ..+.....++.+|+.. +.|+++.||++
T Consensus 120 t~~e~----~~~~~-~~------~d~vl~~~~~~g~~g~~--------~~~~~~~~i~~~~~~~~~~~~~~~i~v~GGI~ 180 (220)
T 2fli_A 120 TPATA----LEPLL-DL------VDQVLIMTVNPGFGGQA--------FIPECLEKVATVAKWRDEKGLSFDIEVDGGVD 180 (220)
T ss_dssp SCGGG----GGGGT-TT------CSEEEEESSCTTCSSCC--------CCGGGHHHHHHHHHHHHHTTCCCEEEEESSCC
T ss_pred CCHHH----HHHHH-hh------CCEEEEEEECCCCcccc--------cCHHHHHHHHHHHHHHHhcCCCceEEEECcCC
Confidence 11111 11121 23 566633 233333221 1122234455566655 68899999999
Q ss_pred HHHHHHHHHcCCCcEEEechHHhhCchHHH
Q 025135 184 RELGIQALAEDGADLVAYGRLFISNPDLVL 213 (257)
Q Consensus 184 ~~~a~~~l~~g~~D~V~igR~~iadP~l~~ 213 (257)
++++.++++.| +|.|.+||++...+|..+
T Consensus 181 ~~~~~~~~~~G-ad~vvvGsai~~~~d~~~ 209 (220)
T 2fli_A 181 NKTIRACYEAG-ANVFVAGSYLFKASDLVS 209 (220)
T ss_dssp TTTHHHHHHHT-CCEEEESHHHHTSSCHHH
T ss_pred HHHHHHHHHcC-CCEEEEChHHhCCCCHHH
Confidence 99998888877 999999999998766533
No 192
>3p0w_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, protein structure initiative; HET: GKR; 1.71A {Ralstonia pickettii} PDB: 4hn8_A 3nxl_A
Probab=98.03 E-value=5.1e-05 Score=71.32 Aligned_cols=126 Identities=13% Similarity=0.087 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHH-cCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCC
Q 025135 24 IDQYRQAALNAIQ-AGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAI 102 (257)
Q Consensus 24 i~~f~~AA~~a~~-aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~ 102 (257)
.+++++.|+.+.+ .||..+.|+.|.. +++ --.+.|++||+++++-.|.+..+.
T Consensus 201 ~e~~~~~a~~~~~~~Gf~~~KlKvG~~--------------------~~~----~Di~rv~avRea~pd~~L~vDaN~-- 254 (470)
T 3p0w_A 201 PAAIARLAEAATERYGFADFKLKGGVM--------------------PGA----EEMEAIAAIKARFPHARVTLDPNG-- 254 (470)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEECSSS--------------------CHH----HHHHHHHHHHHHCTTSEEEEECTT--
T ss_pred HHHHHHHHHHHHHhCCCCEEEEeCCCC--------------------CHH----HHHHHHHHHHHhCCCCeEEeeCCC--
Confidence 4567777877777 6999999987641 112 235779999999732256555553
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC
Q 025135 103 DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF 182 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i 182 (257)
. .+.++++++++.|++. +.||+ +|.... -.......++.+++.+++||.+...+
T Consensus 255 ~-------w~~~~Ai~~~~~Le~~-------l~~iE--eP~~~~----------d~~~~~~~~~~l~~~~~iPIa~dE~~ 308 (470)
T 3p0w_A 255 A-------WSLNEAIALCKGQGHL-------VAYAE--DPCGPE----------AGYSGREVMAEFKRATGIPTATNMIA 308 (470)
T ss_dssp B-------BCHHHHHHHHTTCTTT-------CSEEE--SCBCCB----------TTBCHHHHHHHHHHHHCCCEEESSSS
T ss_pred C-------CCHHHHHHHHHhcccc-------ceeec--CCCChh----------hccchHHHHHHHHhcCCCCEEeCCcc
Confidence 2 3578899999988765 56776 652100 00001345677999999999886666
Q ss_pred -CHHHHHHHHHcCCCcEEEe
Q 025135 183 -TRELGIQALAEDGADLVAY 201 (257)
Q Consensus 183 -t~~~a~~~l~~g~~D~V~i 201 (257)
+..++.++++.+.+|++.+
T Consensus 309 ~~~~~~~~~l~~~a~div~~ 328 (470)
T 3p0w_A 309 TDWRQMGHAVQLHAVDIPLA 328 (470)
T ss_dssp CSHHHHHHHHHTTCCSEEBC
T ss_pred CCHHHHHHHHHcCCCCEEEe
Confidence 7899999999999999854
No 193
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=98.01 E-value=0.0001 Score=65.27 Aligned_cols=54 Identities=20% Similarity=0.197 Sum_probs=43.7
Q ss_pred HHHHHHHHHhCCcEE--EeCCC-CHHHHHHHHHcCCCcEEEechHHhh--Cch-HHHHHHc
Q 025135 163 QLLRTWRRSYQGTFI--CSGGF-TRELGIQALAEDGADLVAYGRLFIS--NPD-LVLRFKL 217 (257)
Q Consensus 163 ~~~~~ir~~~~~pvi--~~G~i-t~~~a~~~l~~g~~D~V~igR~~ia--dP~-l~~k~~~ 217 (257)
..++.+++..++||+ ++||+ +++++.++++.| +|.|++||+++. ||. ..+++++
T Consensus 197 ~~i~~i~~~~~iPvi~~a~GGI~~~~d~~~~~~~G-adgV~vGsai~~~~~p~~~~~~l~~ 256 (305)
T 2nv1_A 197 ELLLQIKKDGKLPVVNFAAGGVATPADAALMMQLG-ADGVFVGSGIFKSDNPAKFAKAIVE 256 (305)
T ss_dssp HHHHHHHHHTSCSSCEEBCSCCCSHHHHHHHHHTT-CSCEEECGGGGGSSCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEeccCCCCHHHHHHHHHcC-CCEEEEcHHHHcCCCHHHHHHHHHH
Confidence 456677887889988 99999 999999999876 999999999996 553 4455543
No 194
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=98.01 E-value=2.1e-05 Score=71.97 Aligned_cols=118 Identities=14% Similarity=0.116 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCC
Q 025135 25 DQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAID 103 (257)
Q Consensus 25 ~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~ 103 (257)
+++++.|+++.+.||..+.|..+ |. . -.+.|++||+++ ++ .|.+..+. .
T Consensus 163 ~~~~~~a~~~~~~G~~~~KiKvg----------~~----~-------------d~~~v~avr~a~-~~~~l~vDaN~--~ 212 (386)
T 1wue_A 163 PQLLKQVQLAVEKGYQRVKLKIR----------PG----Y-------------DVEPVALIRQHF-PNLPLMVDANS--A 212 (386)
T ss_dssp HHHHHHHHHHHHTTCSCEEEECB----------TT----B-------------SHHHHHHHHHHC-TTSCEEEECTT--C
T ss_pred HHHHHHHHHHHHhhhheEEEeeC----------cH----H-------------HHHHHHHHHHhC-CCCeEEEeCCC--C
Confidence 34556777778899999999753 10 0 246789999998 44 45555542 2
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-
Q 025135 104 HLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF- 182 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i- 182 (257)
| +.+++ ++++.|++.+ +.||+ +|- .+......+.+++.+++||++...+
T Consensus 213 ~-------~~~~a-~~~~~l~~~~------i~~iE--qP~--------------~~~d~~~~~~l~~~~~ipIa~dE~~~ 262 (386)
T 1wue_A 213 Y-------TLADL-PQLQRLDHYQ------LAMIE--QPF--------------AADDFLDHAQLQRELKTRICLDENIR 262 (386)
T ss_dssp C-------CGGGH-HHHHGGGGSC------CSCEE--CCS--------------CTTCSHHHHHHHTTCSSCEEECTTCC
T ss_pred C-------CHHHH-HHHHHHHhCC------CeEEe--CCC--------------CcccHHHHHHHHHhcCCCEEeCCccC
Confidence 2 34556 7889999998 88887 552 1122345567888889999988787
Q ss_pred CHHHHHHHHHcCCCcEEEec
Q 025135 183 TRELGIQALAEDGADLVAYG 202 (257)
Q Consensus 183 t~~~a~~~l~~g~~D~V~ig 202 (257)
+++++.++++.+.+|+|.+=
T Consensus 263 ~~~~~~~~i~~~a~d~i~ik 282 (386)
T 1wue_A 263 SLKDCQVALALGSCRSINLK 282 (386)
T ss_dssp SHHHHHHHHHHTCCSEEEEC
T ss_pred CHHHHHHHHHcCCCCEEEEc
Confidence 89999999999999999873
No 195
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=98.01 E-value=0.00014 Score=62.45 Aligned_cols=104 Identities=14% Similarity=0.095 Sum_probs=66.5
Q ss_pred HHHHHHhCCC-eEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhH
Q 025135 83 REVIVAIGAD-RVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEE 161 (257)
Q Consensus 83 ~aiR~~vg~~-~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~ 161 (257)
..+|+..+++ .|++-.+ +.+++ +...+.| +|||-+. +.+...... ...+..
T Consensus 126 ~~~r~~~~~~~~iG~S~h------------t~~Ea----~~A~~~G------aDyI~vg-pvf~T~tK~-----~~~~~g 177 (243)
T 3o63_A 126 NVARQILAPDTLIGRSTH------------DPDQV----AAAAAGD------ADYFCVG-PCWPTPTKP-----GRAAPG 177 (243)
T ss_dssp HHHHHHSCTTCEEEEEEC------------SHHHH----HHHHHSS------CSEEEEC-CSSCCCC----------CCC
T ss_pred HHHHHhhCCCCEEEEeCC------------CHHHH----HHHhhCC------CCEEEEc-CccCCCCCC-----Ccchhh
Confidence 3456666765 5676433 24432 3344578 8999874 333221100 001112
Q ss_pred HHHHHHHHHH--hCCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCchHHHHH
Q 025135 162 AQLLRTWRRS--YQGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNPDLVLRF 215 (257)
Q Consensus 162 ~~~~~~ir~~--~~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~ 215 (257)
...++.+++. .++||++-|||+++++.++++.| +|.|+++++++..+|....+
T Consensus 178 l~~l~~~~~~~~~~iPvvAiGGI~~~ni~~~~~aG-a~gvav~sai~~a~dp~~a~ 232 (243)
T 3o63_A 178 LGLVRVAAELGGDDKPWFAIGGINAQRLPAVLDAG-ARRIVVVRAITSADDPRAAA 232 (243)
T ss_dssp HHHHHHHHTC---CCCEEEESSCCTTTHHHHHHTT-CCCEEESHHHHTCSSHHHHH
T ss_pred HHHHHHHHHhccCCCCEEEecCCCHHHHHHHHHcC-CCEEEEeHHHhCCCCHHHHH
Confidence 3556667765 47999999999999999999988 99999999999876654433
No 196
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=98.00 E-value=4e-05 Score=64.86 Aligned_cols=50 Identities=14% Similarity=0.246 Sum_probs=41.1
Q ss_pred HHHHHHHHHHh-----CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCchHH
Q 025135 162 AQLLRTWRRSY-----QGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNPDLV 212 (257)
Q Consensus 162 ~~~~~~ir~~~-----~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP~l~ 212 (257)
...++.+|+.+ +.|+++.|||+++.+.++++.| +|.|.+|+++...+|..
T Consensus 163 ~~~i~~l~~~~~~~~~~~pi~v~GGI~~~n~~~~~~aG-ad~vvvgSaI~~a~dp~ 217 (230)
T 1rpx_A 163 VKKISDLRKICAERGLNPWIEVDGGVGPKNAYKVIEAG-ANALVAGSAVFGAPDYA 217 (230)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEEESSCCTTTHHHHHHHT-CCEEEESHHHHTSSCHH
T ss_pred HHHHHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHcC-CCEEEEChhhhCCCCHH
Confidence 34556677766 7899999999999998888887 99999999999866643
No 197
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=97.99 E-value=0.00012 Score=62.27 Aligned_cols=52 Identities=12% Similarity=0.141 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHh-CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCchHHH
Q 025135 161 EAQLLRTWRRSY-QGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNPDLVL 213 (257)
Q Consensus 161 ~~~~~~~ir~~~-~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP~l~~ 213 (257)
....++.+|+.. +.++.+.||++++.+.++++.| +|.+.+||++...+|...
T Consensus 156 ~l~ki~~lr~~~~~~~I~VdGGI~~~t~~~~~~aG-Ad~~VvGsaIf~a~dp~~ 208 (228)
T 3ovp_A 156 MMPKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAG-ANMIVSGSAIMRSEDPRS 208 (228)
T ss_dssp GHHHHHHHHHHCTTCEEEEESSCSTTTHHHHHHHT-CCEEEESHHHHTCSCHHH
T ss_pred HHHHHHHHHHhcCCCCEEEeCCcCHHHHHHHHHcC-CCEEEEeHHHhCCCCHHH
Confidence 345566777765 4678889999999999999998 999999999997665443
No 198
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=97.99 E-value=0.00037 Score=65.99 Aligned_cols=132 Identities=13% Similarity=0.071 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCC
Q 025135 26 QYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHL 105 (257)
Q Consensus 26 ~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~ 105 (257)
+..+-|....+||.|.|-|..+||+ ...+.+.++.||+..++-+|.. =+.
T Consensus 281 d~~eR~~aLv~AGvD~iviD~ahGh------------------------s~~v~~~i~~ik~~~p~~~via-GNV----- 330 (556)
T 4af0_A 281 GDKDRLKLLAEAGLDVVVLDSSQGN------------------------SVYQIEFIKWIKQTYPKIDVIA-GNV----- 330 (556)
T ss_dssp HHHHHHHHHHHTTCCEEEECCSCCC------------------------SHHHHHHHHHHHHHCTTSEEEE-EEE-----
T ss_pred cHHHHHHHHHhcCCcEEEEeccccc------------------------cHHHHHHHHHHHhhCCcceEEe-ccc-----
Confidence 3445556667899999999999965 2357889999999886534422 111
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCC---cccCCCcCCCCCCCchh--HHHHHHHHHHHhCCcEEEeC
Q 025135 106 DATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPR---YTAYGQTESGRPGTEDE--EAQLLRTWRRSYQGTFICSG 180 (257)
Q Consensus 106 ~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~---~~~~~~~~~~~~~~~~~--~~~~~~~ir~~~~~pvi~~G 180 (257)
-+.+ -++.|.++| +|.+-+--+. +.+.... +. +.|. ....+...++.+++|||+-|
T Consensus 331 -----aT~e----~a~~Li~aG------AD~vkVGiGpGSiCtTr~v~---Gv-G~PQ~tAi~~~a~~a~~~~vpvIADG 391 (556)
T 4af0_A 331 -----VTRE----QAAQLIAAG------ADGLRIGMGSGSICITQEVM---AV-GRPQGTAVYAVAEFASRFGIPCIADG 391 (556)
T ss_dssp -----CSHH----HHHHHHHHT------CSEEEECSSCSTTBCCTTTC---CS-CCCHHHHHHHHHHHHGGGTCCEEEES
T ss_pred -----cCHH----HHHHHHHcC------CCEEeecCCCCccccccccc---CC-CCcHHHHHHHHHHHHHHcCCCEEecC
Confidence 1333 456677899 8888763221 1111000 11 1222 22234456667789999999
Q ss_pred CC-CHHHHHHHHHcCCCcEEEechHHhh
Q 025135 181 GF-TRELGIQALAEDGADLVAYGRLFIS 207 (257)
Q Consensus 181 ~i-t~~~a~~~l~~g~~D~V~igR~~ia 207 (257)
|| ++-+..++|..| +|+||||..|-.
T Consensus 392 GI~~sGDi~KAlaaG-Ad~VMlGsllAG 418 (556)
T 4af0_A 392 GIGNIGHIAKALALG-ASAVMMGGLLAG 418 (556)
T ss_dssp CCCSHHHHHHHHHTT-CSEEEESTTTTT
T ss_pred CcCcchHHHHHhhcC-CCEEEEchhhcc
Confidence 99 899999999998 999999998864
No 199
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=97.98 E-value=0.00013 Score=60.55 Aligned_cols=125 Identities=15% Similarity=0.131 Sum_probs=74.6
Q ss_pred HHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCCCCC
Q 025135 32 LNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDATDSD 111 (257)
Q Consensus 32 ~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~~ 111 (257)
+.+.++|+|+|-+|...+ + .-+.++++.+++. |. .+++-+... +
T Consensus 71 ~~a~~~Gad~v~vh~~~~--------------------~-----~~~~~~~~~~~~~-g~-~~gv~~~s~---------~ 114 (207)
T 3ajx_A 71 DIAFKAGADLVTVLGSAD--------------------D-----STIAGAVKAAQAH-NK-GVVVDLIGI---------E 114 (207)
T ss_dssp HHHHHTTCSEEEEETTSC--------------------H-----HHHHHHHHHHHHH-TC-EEEEECTTC---------S
T ss_pred HHHHhCCCCEEEEeccCC--------------------h-----HHHHHHHHHHHHc-CC-ceEEEEecC---------C
Confidence 566789999999997641 0 1233555555543 43 456544310 1
Q ss_pred cHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCCCHHHHHHHH
Q 025135 112 PLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGFTRELGIQAL 191 (257)
Q Consensus 112 ~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~it~~~a~~~l 191 (257)
+..+ .++.+.+.| ++++.+.. .+.... .+ ..+.. ..++++++. +.|+++.||++++.+.+++
T Consensus 115 ~p~~---~~~~~~~~g------~d~v~~~~-~~~~~~---~g---~~~~~-~~i~~~~~~-~~pi~v~GGI~~~~~~~~~ 176 (207)
T 3ajx_A 115 DKAT---RAQEVRALG------AKFVEMHA-GLDEQA---KP---GFDLN-GLLAAGEKA-RVPFSVAGGVKVATIPAVQ 176 (207)
T ss_dssp SHHH---HHHHHHHTT------CSEEEEEC-CHHHHT---ST---TCCTH-HHHHHHHHH-TSCEEEESSCCGGGHHHHH
T ss_pred ChHH---HHHHHHHhC------CCEEEEEe-cccccc---cC---CCchH-HHHHHhhCC-CCCEEEECCcCHHHHHHHH
Confidence 2222 234455668 88884432 221100 00 11111 233333332 7899999999999999999
Q ss_pred HcCCCcEEEechHHhhCchH
Q 025135 192 AEDGADLVAYGRLFISNPDL 211 (257)
Q Consensus 192 ~~g~~D~V~igR~~iadP~l 211 (257)
+.| +|+|.+||+++..+|.
T Consensus 177 ~aG-ad~vvvGsaI~~~~dp 195 (207)
T 3ajx_A 177 KAG-AEVAVAGGAIYGAADP 195 (207)
T ss_dssp HTT-CSEEEESHHHHTSSSH
T ss_pred HcC-CCEEEEeeeccCCCCH
Confidence 987 9999999999986654
No 200
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=97.98 E-value=0.00018 Score=62.52 Aligned_cols=138 Identities=13% Similarity=0.042 Sum_probs=83.2
Q ss_pred HHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCC-C-eEEEEEccCCCCCC
Q 025135 29 QAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGA-D-RVGVRMSPAIDHLD 106 (257)
Q Consensus 29 ~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~-~-~v~vrls~~~~~~~ 106 (257)
..++.|.+.|+|.|+++.--| . ++. +..++-++++++.+.. . ++.+-..+. + .+
T Consensus 96 ~~ve~Ai~~Ga~~v~~~~nig--------------~----~~~----~~~~~~~~~v~~~~~~~~~~vIi~~~~~-G-~~ 151 (263)
T 1w8s_A 96 CSVEEAVSLGASAVGYTIYPG--------------S----GFE----WKMFEELARIKRDAVKFDLPLVVESFPR-G-GK 151 (263)
T ss_dssp SCHHHHHHTTCSEEEEEECTT--------------S----TTH----HHHHHHHHHHHHHHHHHTCCEEEEECCC-S-TT
T ss_pred HHHHHHHHCCCCEEEEEEecC--------------C----cCH----HHHHHHHHHHHHHHHHcCCeEEEEeeCC-C-Cc
Confidence 345667789999999865211 0 111 2344444444444421 1 443322111 0 11
Q ss_pred CCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCC-cEEEeCCC---
Q 025135 107 ATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQG-TFICSGGF--- 182 (257)
Q Consensus 107 ~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~-pvi~~G~i--- 182 (257)
.....+.+.....++...+.| +|||-+.-+ . ..+.++.+++.++. ||++.||+
T Consensus 152 ~~~~~s~~~i~~a~~~a~~~G------AD~vkt~~~--------------~---~~e~~~~~~~~~~~~pV~asGGi~~~ 208 (263)
T 1w8s_A 152 VVNETAPEIVAYAARIALELG------ADAMKIKYT--------------G---DPKTFSWAVKVAGKVPVLMSGGPKTK 208 (263)
T ss_dssp CCCTTCHHHHHHHHHHHHHHT------CSEEEEECC--------------S---SHHHHHHHHHHTTTSCEEEECCSCCS
T ss_pred cccCCCHHHHHHHHHHHHHcC------CCEEEEcCC--------------C---CHHHHHHHHHhCCCCeEEEEeCCCCC
Confidence 111114455555678888999 999987521 0 12456777877787 99999998
Q ss_pred CHHHHHHHH----HcCCCcEEEechHHhhCchHHHH
Q 025135 183 TRELGIQAL----AEDGADLVAYGRLFISNPDLVLR 214 (257)
Q Consensus 183 t~~~a~~~l----~~g~~D~V~igR~~iadP~l~~k 214 (257)
|.+++.+.+ +.| ++.+++||..+..||-...
T Consensus 209 ~~~~~l~~i~~~~~aG-A~GvsvgraI~~~~dp~~~ 243 (263)
T 1w8s_A 209 TEEDFLKQVEGVLEAG-ALGIAVGRNVWQRRDALKF 243 (263)
T ss_dssp SHHHHHHHHHHHHHTT-CCEEEESHHHHTSTTHHHH
T ss_pred CHHHHHHHHHHHHHcC-CeEEEEehhhcCCcCHHHH
Confidence 466665555 766 8999999999998875443
No 201
>3pfr_A Mandelate racemase/muconate lactonizing protein; emolase superfamily fold, D-glucarate dehydratase, D-glucara isomerase; HET: GKR; 1.90A {Actinobacillus succinogenes} PDB: 3n6j_A 3n6h_A* 4gyp_C*
Probab=97.98 E-value=6.3e-05 Score=70.43 Aligned_cols=126 Identities=15% Similarity=0.107 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHH-cCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCC
Q 025135 24 IDQYRQAALNAIQ-AGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAI 102 (257)
Q Consensus 24 i~~f~~AA~~a~~-aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~ 102 (257)
.+++++.|+.+.+ .||..++|+.|.. +++ --.+.|++||+++++-.|.+..+.
T Consensus 186 ~e~~~~~a~~~~~~~Gf~~~KlKvG~~--------------------~~~----~Di~~v~avRea~pd~~L~vDaN~-- 239 (455)
T 3pfr_A 186 TQAVIELAAASKDRYGFKDFKLKGGVF--------------------EGS----KEIDTVIELKKHFPDARITLDPNG-- 239 (455)
T ss_dssp HHHHHHHHHHHHHHHCCSCEEEECSSS--------------------CHH----HHHHHHHHHHHHCTTCCEEEECTT--
T ss_pred HHHHHHHHHHHHHhCCCCEEEEcCCCC--------------------CHH----HHHHHHHHHHHhCCCCeEeecCCC--
Confidence 3556677777776 6999999987640 112 235679999999743256655553
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC
Q 025135 103 DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF 182 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i 182 (257)
. .+.++++++++.|++. +.||+ +|.... -.....+.++.+++.+++||.+...+
T Consensus 240 ~-------w~~~~A~~~~~~L~~~-------l~~iE--eP~~~~----------d~~~~~~~~~~l~~~~~iPIa~dE~~ 293 (455)
T 3pfr_A 240 C-------WSLDEAIQLCKGLNDV-------LTYAE--DPCIGE----------NGYSGREIMAEFRRRTGIPTATNMIA 293 (455)
T ss_dssp B-------SCHHHHHHHHTTCTTT-------CSEEE--SCBCCB----------TTBCHHHHHHHHHHHHCCCEEESSSC
T ss_pred C-------CCHHHHHHHHHhhccc-------ceeee--cCCChh----------hccchHHHHHHHHhcCCCCEEeCCCc
Confidence 2 3578899999988765 56776 552100 00001355678999999999886656
Q ss_pred -CHHHHHHHHHcCCCcEEEe
Q 025135 183 -TRELGIQALAEDGADLVAY 201 (257)
Q Consensus 183 -t~~~a~~~l~~g~~D~V~i 201 (257)
+..++.++++.+.+|++.+
T Consensus 294 ~~~~~~~~~i~~~a~di~~~ 313 (455)
T 3pfr_A 294 TNWREMCHAIMLQSVDIPLA 313 (455)
T ss_dssp CSHHHHHHHHHHTCCSEEBC
T ss_pred CCHHHHHHHHHcCCCCEEEe
Confidence 7889999999999999854
No 202
>2opj_A O-succinylbenzoate-COA synthase; TIM barrel, structural genomics, protein structure initiative; 1.60A {Thermobifida fusca} PDB: 2qvh_A*
Probab=97.96 E-value=6.3e-05 Score=67.41 Aligned_cols=112 Identities=21% Similarity=0.251 Sum_probs=74.3
Q ss_pred HcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCCCCCCCCCCcHH
Q 025135 36 QAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAIDHLDATDSDPLG 114 (257)
Q Consensus 36 ~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~~~~~~~~~~~~ 114 (257)
+.||..++|..|. + |.+++ --.+.|++||+++|++ .|.+..+. . .+.+
T Consensus 90 ~~G~~~~KiKvg~---------~---------g~~~~----~d~~~v~avR~~~G~~~~L~vDaN~--~-------w~~~ 138 (327)
T 2opj_A 90 SSGCTTAKVKVAE---------R---------GQSEA----NDVARVEAVRDALGPRGRVRIDVNG--A-------WDVD 138 (327)
T ss_dssp HHCCSEEEEECCC----------------------------CHHHHHHHHHHHHCTTSEEEEECTT--C-------SCHH
T ss_pred HCCCCEEEEEeCC---------C---------CCCHH----HHHHHHHHHHHHhCCCCEEEEECCC--C-------CCHH
Confidence 5799999998763 1 11222 2357899999999986 45555542 2 3578
Q ss_pred HHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHHHc
Q 025135 115 LGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQALAE 193 (257)
Q Consensus 115 ~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~~ 193 (257)
+++++++.|++.+ +.||+ +|. .. ...++.+++.+++||++...+ +.+++.++++.
T Consensus 139 ~A~~~~~~L~~~~------l~~iE--qP~--------------~~--~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~ 194 (327)
T 2opj_A 139 TAVRMIRLLDRFE------LEYVE--QPC--------------AT--VDELAEVRRRVSVPIAADESIRRAEDPLRVRDA 194 (327)
T ss_dssp HHHHHHHHHGGGC------EEEEE--CCS--------------SS--HHHHHHHHHHCSSCEEC-----------CTTTT
T ss_pred HHHHHHHHHHhcC------CcEEe--CCC--------------CC--HHHHHHHHhhCCCCEEcCCCCCCHHHHHHHHHh
Confidence 8999999999998 88887 651 11 245677888999999988887 88999999999
Q ss_pred CCCcEEEec
Q 025135 194 DGADLVAYG 202 (257)
Q Consensus 194 g~~D~V~ig 202 (257)
+.+|+|.+=
T Consensus 195 ~a~d~i~ik 203 (327)
T 2opj_A 195 EAADVVVLK 203 (327)
T ss_dssp TCCSBEEEC
T ss_pred CCCCEEEeC
Confidence 999999873
No 203
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=97.94 E-value=9.9e-05 Score=61.94 Aligned_cols=49 Identities=20% Similarity=0.162 Sum_probs=41.3
Q ss_pred HHHHHHHHHHhC-CcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCchH
Q 025135 162 AQLLRTWRRSYQ-GTFICSGGFTRELGIQALAEDGADLVAYGRLFISNPDL 211 (257)
Q Consensus 162 ~~~~~~ir~~~~-~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP~l 211 (257)
+..++.+++.++ +||++.||++++++.++++.| +|.|.+|+++...+|.
T Consensus 160 ~~~l~~~~~~~~~~pvia~GGI~~~nv~~~~~~G-a~gv~vgs~i~~~~d~ 209 (227)
T 2tps_A 160 VSLIEAVRRQGISIPIVGIGGITIDNAAPVIQAG-ADGVSMISAISQAEDP 209 (227)
T ss_dssp THHHHHHHHTTCCCCEEEESSCCTTTSHHHHHTT-CSEEEESHHHHTSSCH
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHcC-CCEEEEhHHhhcCCCH
Confidence 356677888888 999999999999999988876 9999999999975543
No 204
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=97.94 E-value=4.4e-05 Score=66.79 Aligned_cols=58 Identities=16% Similarity=0.280 Sum_probs=50.8
Q ss_pred HHHHHHHHHHh--CCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhC--chHHHHHHcCCC
Q 025135 162 AQLLRTWRRSY--QGTFICSGGF-TRELGIQALAEDGADLVAYGRLFISN--PDLVLRFKLNAP 220 (257)
Q Consensus 162 ~~~~~~ir~~~--~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~iad--P~l~~k~~~g~~ 220 (257)
.+.++.+++.+ .+||+++||| |+++++++++.| +|.|.+|.+++.| |++++++....|
T Consensus 214 ~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aG-AD~VVVGSAav~d~~Pelv~e~a~~~~ 276 (286)
T 3vk5_A 214 PEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSG-ADYVGFAGALEQPDWRSALAEIAGRRP 276 (286)
T ss_dssp HHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTT-CSEEEESGGGSSTTHHHHHHHHHC---
T ss_pred HHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcC-CCEEEECchhhcCCCHHHHHHHHHhCC
Confidence 46778899999 8999999999 999999999998 9999999999999 999999985543
No 205
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=97.94 E-value=1.5e-05 Score=68.76 Aligned_cols=87 Identities=15% Similarity=0.075 Sum_probs=66.4
Q ss_pred HHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHHHcC
Q 025135 116 GLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQALAED 194 (257)
Q Consensus 116 ~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~~g 194 (257)
..++++.+++.| ++.|++++....... .......++.+++.+++||++.|++ ++++++++++.|
T Consensus 32 ~~~~a~~~~~~G------a~~i~v~d~~~~~~~---------~g~~~~~i~~i~~~~~iPvi~~ggi~~~~~i~~~~~~G 96 (266)
T 2w6r_A 32 LRDWVVEVEKRG------AGEILLTSIDRDGTK---------SGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAG 96 (266)
T ss_dssp HHHHHHHHHHHT------CSEEEEEETTTSSCS---------SCCCHHHHHHHGGGCCSCEEEESCCCSTHHHHHHHHHT
T ss_pred HHHHHHHHHHCC------CCEEEEEecCcccCC---------CcccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC
Confidence 467889999999 899998765322111 1123467788888899999999999 899999999887
Q ss_pred CCcEEEechHHh-h--CchHHHHHHcC
Q 025135 195 GADLVAYGRLFI-S--NPDLVLRFKLN 218 (257)
Q Consensus 195 ~~D~V~igR~~i-a--dP~l~~k~~~g 218 (257)
+|.|.+|+.++ . +|++++++.+.
T Consensus 97 -ad~v~lg~~~~~~~~~~~~~~~~~~~ 122 (266)
T 2w6r_A 97 -ADKALAASVFHFREIDMRELKEYLKK 122 (266)
T ss_dssp -CSEEECCCCC------CHHHHHHCC-
T ss_pred -CcHhhhhHHHHhCCCCHHHHHHHHHH
Confidence 99999999999 6 99999998643
No 206
>4g8t_A Glucarate dehydratase; enolase, enzyme function INI EFI, structural genomics, lyase; 1.70A {Actinobacillus succinogenes} PDB: 1ec7_A 1ec8_A* 1ec9_A* 1ecq_A* 1jdf_A* 3pwi_A* 1jct_A* 3pwg_A* 1bqg_A
Probab=97.93 E-value=7.8e-05 Score=69.92 Aligned_cols=116 Identities=11% Similarity=0.045 Sum_probs=82.1
Q ss_pred HHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCCCCCcH
Q 025135 34 AIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDATDSDPL 113 (257)
Q Consensus 34 a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~~~~ 113 (257)
..+.||+.+.|+.|.. +.+ --.+.|++||+++|+..|.+-.+. . .+.
T Consensus 214 ~~~~Gf~~~KlKvG~~--------------------~~~----~di~~v~avrea~pd~~L~vDaN~--~-------wt~ 260 (464)
T 4g8t_A 214 YEKYGFNDFKLKGGVL--------------------DGF----EEAEAVTALAKRFPDARITLDPNG--A-------WSL 260 (464)
T ss_dssp HHHHCCSCEEEECSSS--------------------CHH----HHHHHHHHHHHHSTTCCEEEECTT--C-------BCH
T ss_pred HHHcCCCeEEEeCCCC--------------------CHH----HHHHHHHHHHhhCCCceEEEECCC--c-------cCH
Confidence 3456999999987640 112 235779999999985456655543 2 357
Q ss_pred HHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHHH
Q 025135 114 GLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQALA 192 (257)
Q Consensus 114 ~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~ 192 (257)
++++++++.|++. +.|++ +|..... .....+.++.+++..++||.+...+ ++.++.++|+
T Consensus 261 ~~Ai~~~~~le~~-------l~wiE--eP~~~~d----------~~~~~e~~a~lr~~~~iPIa~gE~~~~~~~~~~~i~ 321 (464)
T 4g8t_A 261 DEAVKIGKQLKGV-------LAYAE--DPCGAEQ----------GYSGREIMAEFRRATGLPTATNMIATDWRQMGHTIS 321 (464)
T ss_dssp HHHHHHHHHTTTT-------CSCEE--SCBCCBT----------TBCHHHHHHHHHHHHCCCEEESSSSCSHHHHHHHHH
T ss_pred HHHHHHHHHhhhc-------cceee--cCcCccc----------ccchHHHHHhhhccCCCCccccccccchhhHHHHHH
Confidence 8899999999764 56776 5521100 0112355678999999999988887 8999999999
Q ss_pred cCCCcEEEe
Q 025135 193 EDGADLVAY 201 (257)
Q Consensus 193 ~g~~D~V~i 201 (257)
.+.+|++..
T Consensus 322 ~~avdi~~~ 330 (464)
T 4g8t_A 322 LQSVDIPLA 330 (464)
T ss_dssp HTCCSEEBC
T ss_pred hhCCCEEec
Confidence 999997754
No 207
>2p3z_A L-rhamnonate dehydratase; enolase, structural genomics, PSI, protein structure initiat YORK structural genomics research consortium; 1.80A {Salmonella typhimurium LT2} PDB: 3box_A 3cxo_A* 2gsh_A 3d47_A 3d46_A 2i5q_A
Probab=97.90 E-value=0.00027 Score=65.38 Aligned_cols=95 Identities=9% Similarity=0.040 Sum_probs=72.4
Q ss_pred hhHHHHHHHHHHHHhCCC-eEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCC
Q 025135 75 CRFLMQLVREVIVAIGAD-RVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESG 153 (257)
Q Consensus 75 ~r~~~eiv~aiR~~vg~~-~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~ 153 (257)
.+--.+.|++||+++|++ .|.+..+. . .+.++++++++.|++.+ +.||+ +|-
T Consensus 205 ~~~d~~~v~avrea~G~~~~L~vDaN~--~-------~~~~~Ai~~~~~l~~~~------i~~iE--qPl---------- 257 (415)
T 2p3z_A 205 IRKDAAMVADMREKCGPDFWLMLDCWM--S-------QDVNYATKLAHACAPFN------LKWIE--ECL---------- 257 (415)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEEEECTT--C-------CCHHHHHHHHHHHGGGT------CCEEE--CCS----------
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEECCC--C-------CCHHHHHHHHHHHhhcC------CceEe--CCC----------
Confidence 445678899999999986 45555442 2 35788999999999998 88887 652
Q ss_pred CCCCchhHHHHHHHHHHHhC--CcEEEeCCC-CHHHHHHHHHcCCCcEEEe
Q 025135 154 RPGTEDEEAQLLRTWRRSYQ--GTFICSGGF-TRELGIQALAEDGADLVAY 201 (257)
Q Consensus 154 ~~~~~~~~~~~~~~ir~~~~--~pvi~~G~i-t~~~a~~~l~~g~~D~V~i 201 (257)
.+......+.+++.++ +||++...+ ++.++.++|+.+ +|+|.+
T Consensus 258 ----~~~d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~i~~~-~d~i~i 303 (415)
T 2p3z_A 258 ----PPQQYEGYRELKRNAPAGMMVTSGEHHGTLQSFRTLAETG-IDIMQP 303 (415)
T ss_dssp ----CTTCHHHHHHHHHHSCTTCEEEECTTCCSHHHHHHHHHTT-CSEECC
T ss_pred ----CcchHHHHHHHHHhcCCCCcEEcCCCCCCHHHHHHHHHcC-CCEEEe
Confidence 1223455677888887 788777676 899999999999 999976
No 208
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=97.88 E-value=0.00044 Score=65.39 Aligned_cols=130 Identities=17% Similarity=0.171 Sum_probs=81.3
Q ss_pred HHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCC-CeEEEEEccCCCCCCC
Q 025135 29 QAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGA-DRVGVRMSPAIDHLDA 107 (257)
Q Consensus 29 ~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~-~~v~vrls~~~~~~~~ 107 (257)
+.++.+.++|.+.+.++..||+ .....+.++.+|+..+. .+|.+.--.
T Consensus 245 e~~~~l~e~gv~~l~Vd~~~g~------------------------~~~~~~~i~~lk~~~~~~~~Vi~G~V~------- 293 (503)
T 1me8_A 245 ERVPALVEAGADVLCIDSSDGF------------------------SEWQKITIGWIREKYGDKVKVGAGNIV------- 293 (503)
T ss_dssp HHHHHHHHHTCSEEEECCSCCC------------------------SHHHHHHHHHHHHHHGGGSCEEEEEEC-------
T ss_pred HHHHHHHhhhccceEEecccCc------------------------ccchhhHHHHHHHhCCCCceEeecccc-------
Confidence 3355667789999999887642 12366677889988754 455543221
Q ss_pred CCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeC-CCcccCCCcCCCCCCCchhHHHHHHHHHHH---h------CCcEE
Q 025135 108 TDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQ-PRYTAYGQTESGRPGTEDEEAQLLRTWRRS---Y------QGTFI 177 (257)
Q Consensus 108 ~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~---~------~~pvi 177 (257)
+.+ -++.|.++| ++++.+.. +..........+ . +.+ ....+..+.+. + ++|||
T Consensus 294 ----t~~----~a~~l~~aG------ad~I~Vg~~~g~~~~~r~~~~-~-g~p-~~~~l~~v~~~~~~~~~~~~~~ipvi 356 (503)
T 1me8_A 294 ----DGE----GFRYLADAG------ADFIKIGIGGGSICITREQKG-I-GRG-QATAVIDVVAERNKYFEETGIYIPVC 356 (503)
T ss_dssp ----SHH----HHHHHHHHT------CSEEEECSSCSTTCCSTTTTC-C-CCC-HHHHHHHHHHHHHHHHHHHSEECCEE
T ss_pred ----CHH----HHHHHHHhC------CCeEEecccCCcCcccccccC-C-CCc-hHHHHHHHHHHHHHHhhhcCCCceEE
Confidence 233 356677899 88887632 211100000000 0 112 22333333332 2 69999
Q ss_pred EeCCC-CHHHHHHHHHcCCCcEEEechHHhh
Q 025135 178 CSGGF-TRELGIQALAEDGADLVAYGRLFIS 207 (257)
Q Consensus 178 ~~G~i-t~~~a~~~l~~g~~D~V~igR~~ia 207 (257)
+.||+ ++.++.++|.-| ||+|++||+|+.
T Consensus 357 a~GGi~~~~di~kAlalG-A~~V~iG~~~~~ 386 (503)
T 1me8_A 357 SDGGIVYDYHMTLALAMG-ADFIMLGRYFAR 386 (503)
T ss_dssp EESCCCSHHHHHHHHHTT-CSEEEESHHHHT
T ss_pred EeCCCCCHHHHHHHHHcC-CCEEEECchhhc
Confidence 99999 999999999998 999999999974
No 209
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=97.88 E-value=0.00022 Score=62.03 Aligned_cols=45 Identities=13% Similarity=0.097 Sum_probs=39.8
Q ss_pred HHHHHHHHHHhCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhh
Q 025135 162 AQLLRTWRRSYQGTFICSGGF-TRELGIQALAEDGADLVAYGRLFIS 207 (257)
Q Consensus 162 ~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~ia 207 (257)
...++.+|+..+.||++.||+ |++++.+++..| +|.|.+|.+++.
T Consensus 194 ~~~i~~lr~~~~~pi~vggGI~t~e~~~~~~~ag-AD~vVVGSai~~ 239 (268)
T 1qop_A 194 HHLIEKLKEYHAAPALQGFGISSPEQVSAAVRAG-AAGAISGSAIVK 239 (268)
T ss_dssp HHHHHHHHHTTCCCEEEESSCCSHHHHHHHHHTT-CSEEEECHHHHH
T ss_pred HHHHHHHHhccCCcEEEECCCCCHHHHHHHHHcC-CCEEEEChHHhh
Confidence 456788898889999999999 699999999888 999999999863
No 210
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=97.87 E-value=0.00056 Score=59.67 Aligned_cols=163 Identities=15% Similarity=0.136 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhh----------HhhHHHHHHHHHHHHhCCCeE
Q 025135 25 DQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIEN----------RCRFLMQLVREVIVAIGADRV 94 (257)
Q Consensus 25 ~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~en----------R~r~~~eiv~aiR~~vg~~~v 94 (257)
+.+.+.++...++|.|.|||..-. -.|. -| |-.+++ +++-++++++++|+....-||
T Consensus 34 ~~~~~~~~~l~~~GaD~iElGiPf-------SDP~----aD--GpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pi 100 (271)
T 3nav_A 34 EQSLAIMQTLIDAGADALELGMPF-------SDPL----AD--GPTIQGANLRALAAKTTPDICFELIAQIRARNPETPI 100 (271)
T ss_dssp HHHHHHHHHHHHTTCSSEEEECCC-------CCGG----GC--CSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCE
T ss_pred HHHHHHHHHHHHcCCCEEEECCCC-------CCCC----CC--CHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCE
Confidence 446677777888999999986432 1121 11 223332 234678999999987222255
Q ss_pred EEE--EccC-----C---------CCCCC-CCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcc----------cC
Q 025135 95 GVR--MSPA-----I---------DHLDA-TDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYT----------AY 147 (257)
Q Consensus 95 ~vr--ls~~-----~---------~~~~~-~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~----------~~ 147 (257)
.+- .++. + +.++. -...+.++..++.+.+.+.| ++.+.+..|.-. ..
T Consensus 101 vlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~g------l~~I~lvap~t~~eri~~i~~~~~ 174 (271)
T 3nav_A 101 GLLMYANLVYARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFG------IQPIFIAPPTASDETLRAVAQLGK 174 (271)
T ss_dssp EEEECHHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTT------CEEEEEECTTCCHHHHHHHHHHCC
T ss_pred EEEecCcHHHHHhHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcC------CeEEEEECCCCCHHHHHHHHHHCC
Confidence 432 1220 0 01110 01123444555666666666 555544433221 01
Q ss_pred CCc----CC---CCC-CCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhh
Q 025135 148 GQT----ES---GRP-GTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQALAEDGADLVAYGRLFIS 207 (257)
Q Consensus 148 ~~~----~~---~~~-~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~ia 207 (257)
++. .. |.. .......+.++.+|+..+.||++.+|| |++++.+.+..| +|.|.+|.+++.
T Consensus 175 gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGIst~e~~~~~~~~g-ADgvIVGSAiv~ 242 (271)
T 3nav_A 175 GYTYLLSRAGVTGAETKANMPVHALLERLQQFDAPPALLGFGISEPAQVKQAIEAG-AAGAISGSAVVK 242 (271)
T ss_dssp SCEEECCCC--------CCHHHHHHHHHHHHTTCCCEEECSSCCSHHHHHHHHHTT-CSEEEESHHHHH
T ss_pred CeEEEEeccCCCCcccCCchhHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC-CCEEEECHHHHH
Confidence 110 00 100 012233467788999889999999999 899999899887 999999999873
No 211
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=97.86 E-value=0.00045 Score=59.82 Aligned_cols=133 Identities=15% Similarity=0.152 Sum_probs=91.0
Q ss_pred HHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCC
Q 025135 28 RQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDA 107 (257)
Q Consensus 28 ~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~ 107 (257)
+.-++.|.+.|+|.|+++.--|.|.+ ++...+.+=|.+|+++++..++ |+=....+
T Consensus 114 v~Ea~~Ai~~GAdEIDmViNig~lk~-------------------g~~~~v~~eI~~v~~a~~~~~l--KVIlEt~~--- 169 (260)
T 3r12_A 114 AHEAIFAVESGADEIDMVINVGMLKA-------------------KEWEYVYEDIRSVVESVKGKVV--KVIIETCY--- 169 (260)
T ss_dssp HHHHHHHHHHTCSEEEEECCHHHHHT-------------------TCHHHHHHHHHHHHHHTTTSEE--EEECCGGG---
T ss_pred HHHHHHHHHcCCCEEEEEeehhhhcc-------------------ccHHHHHHHHHHHHHhcCCCcE--EEEEeCCC---
Confidence 55677888999999999876655432 2345788889999999874343 54322221
Q ss_pred CCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhC--CcEEEeCCC-CH
Q 025135 108 TDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQ--GTFICSGGF-TR 184 (257)
Q Consensus 108 ~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~--~pvi~~G~i-t~ 184 (257)
.+.++....|+...++| .|||-.+.+ +.. .....+.++.+++.++ ++|-++||+ |.
T Consensus 170 ---Lt~eei~~A~~ia~eaG------ADfVKTSTG-f~~-----------~GAT~edV~lm~~~vg~~v~VKaAGGIrt~ 228 (260)
T 3r12_A 170 ---LDTEEKIAACVISKLAG------AHFVKTSTG-FGT-----------GGATAEDVHLMKWIVGDEMGVKASGGIRTF 228 (260)
T ss_dssp ---CCHHHHHHHHHHHHHTT------CSEEECCCS-SSS-----------CCCCHHHHHHHHHHHCTTSEEEEESSCCSH
T ss_pred ---CCHHHHHHHHHHHHHhC------cCEEEcCCC-CCC-----------CCCCHHHHHHHHHHhCCCceEEEeCCCCCH
Confidence 24566677888889999 999987643 211 1112344555666664 679999999 89
Q ss_pred HHHHHHHHcCCCcEEEe--chHHh
Q 025135 185 ELGIQALAEDGADLVAY--GRLFI 206 (257)
Q Consensus 185 ~~a~~~l~~g~~D~V~i--gR~~i 206 (257)
++|.++|+.| ++-++. |+..+
T Consensus 229 ~~al~mi~aG-A~RiGtS~g~~I~ 251 (260)
T 3r12_A 229 EDAVKMIMYG-ADRIGTSSGVKIV 251 (260)
T ss_dssp HHHHHHHHTT-CSEEEESCHHHHH
T ss_pred HHHHHHHHcC-CceeecchHHHHH
Confidence 9999999998 995544 44444
No 212
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=97.85 E-value=9.1e-05 Score=63.05 Aligned_cols=127 Identities=18% Similarity=0.288 Sum_probs=79.9
Q ss_pred HHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCCCC
Q 025135 31 ALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDATDS 110 (257)
Q Consensus 31 A~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~ 110 (257)
...+.++|+|+|-+|..|. + + ....++++.+|+. |. .+++=+++.
T Consensus 78 i~~~~~aGadgv~vh~e~~--------~-----~-----------~~~~~~~~~i~~~-g~-~~gv~~~p~--------- 122 (230)
T 1tqj_A 78 VEDFAKAGADIISVHVEHN--------A-----S-----------PHLHRTLCQIREL-GK-KAGAVLNPS--------- 122 (230)
T ss_dssp HHHHHHHTCSEEEEECSTT--------T-----C-----------TTHHHHHHHHHHT-TC-EEEEEECTT---------
T ss_pred HHHHHHcCCCEEEECcccc--------c-----c-----------hhHHHHHHHHHHc-CC-cEEEEEeCC---------
Confidence 3566789999999997631 0 0 1245667777653 32 577777653
Q ss_pred CcHHHHHHHHHHHHhcCCccCCceeEEEee--CCCcccCCCcCCCCCCCchhHHHHHHHHHHHh-----CCcEEEeCCCC
Q 025135 111 DPLGLGLAVIQGLNKLQIDQGAKLTYLHVT--QPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY-----QGTFICSGGFT 183 (257)
Q Consensus 111 ~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~-----~~pvi~~G~it 183 (257)
++.+. .+.+.+ + +||+-+. .|.+... ...+.....++++|+.. +.||.+-|||+
T Consensus 123 t~~e~----~~~~~~-~------~D~v~~msv~pg~ggq--------~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~ 183 (230)
T 1tqj_A 123 TPLDF----LEYVLP-V------CDLILIMSVNPGFGGQ--------SFIPEVLPKIRALRQMCDERGLDPWIEVDGGLK 183 (230)
T ss_dssp CCGGG----GTTTGG-G------CSEEEEESSCC----C--------CCCGGGHHHHHHHHHHHHHHTCCCEEEEESSCC
T ss_pred CcHHH----HHHHHh-c------CCEEEEEEeccccCCc--------cCcHHHHHHHHHHHHHHHhcCCCCcEEEECCcC
Confidence 12211 122222 4 6777543 2322211 12233445667777776 78999999998
Q ss_pred HHHHHHHHHcCCCcEEEechHHhhCchHH
Q 025135 184 RELGIQALAEDGADLVAYGRLFISNPDLV 212 (257)
Q Consensus 184 ~~~a~~~l~~g~~D~V~igR~~iadP~l~ 212 (257)
.+.+.++++.| +|.|.+|++++..+|.-
T Consensus 184 ~~~~~~~~~aG-ad~vvvGSai~~a~d~~ 211 (230)
T 1tqj_A 184 PNNTWQVLEAG-ANAIVAGSAVFNAPNYA 211 (230)
T ss_dssp TTTTHHHHHHT-CCEEEESHHHHTSSCHH
T ss_pred HHHHHHHHHcC-CCEEEECHHHHCCCCHH
Confidence 89999999888 99999999999866643
No 213
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=97.83 E-value=0.00016 Score=62.43 Aligned_cols=170 Identities=16% Similarity=0.141 Sum_probs=93.6
Q ss_pred HHHHHHHHHHHHcCCCEEEeccccc--chhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEE--EEcc
Q 025135 25 DQYRQAALNAIQAGFDGIEIHGAHG--YLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGV--RMSP 100 (257)
Q Consensus 25 ~~f~~AA~~a~~aGfDgVEIh~a~G--yLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~v--rls~ 100 (257)
+.+.+.++.+.++|+|.|||...+. ..=..|+ +..+.|.-+.|- +.+...+++++||+.++- ||.+ +.++
T Consensus 32 ~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i-~~a~~~al~~g~----~~~~~~~~i~~ir~~~~~-Pv~~m~~~~~ 105 (262)
T 1rd5_A 32 ATTAEALRLLDGCGADVIELGVPCSDPYIDGPII-QASVARALASGT----TMDAVLEMLREVTPELSC-PVVLLSYYKP 105 (262)
T ss_dssp HHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHH-HHHHHHHHTTTC----CHHHHHHHHHHHGGGCSS-CEEEECCSHH
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHH-HHHHHHHHHcCC----CHHHHHHHHHHHHhcCCC-CEEEEecCcH
Confidence 5677788888899999999964331 0000000 001111112221 356788999999988533 6544 2332
Q ss_pred CC----------CCCCC-CCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcc----------cCCC----cC---C
Q 025135 101 AI----------DHLDA-TDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYT----------AYGQ----TE---S 152 (257)
Q Consensus 101 ~~----------~~~~~-~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~----------~~~~----~~---~ 152 (257)
.. +.+.. -...+.++..++.+.+.+.| ++.+.+..+... ..++ +. .
T Consensus 106 ~~~~~~~~a~~aGadgv~v~d~~~~~~~~~~~~~~~~g------~~~i~~~a~~t~~e~~~~~~~~~~g~v~~~s~~G~t 179 (262)
T 1rd5_A 106 IMFRSLAKMKEAGVHGLIVPDLPYVAAHSLWSEAKNNN------LELVLLTTPAIPEDRMKEITKASEGFVYLVSVNGVT 179 (262)
T ss_dssp HHSCCTHHHHHTTCCEEECTTCBTTTHHHHHHHHHHTT------CEECEEECTTSCHHHHHHHHHHCCSCEEEECSSCCB
T ss_pred HHHHHHHHHHHcCCCEEEEcCCChhhHHHHHHHHHHcC------CceEEEECCCCCHHHHHHHHhcCCCeEEEecCCCCC
Confidence 10 00100 01123334556666667777 333322222100 0000 00 0
Q ss_pred CCC-CCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhh
Q 025135 153 GRP-GTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQALAEDGADLVAYGRLFIS 207 (257)
Q Consensus 153 ~~~-~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~ia 207 (257)
+.. ...+.....++.+++..++||++.||| |++++.++++.| +|.|.+|.+++.
T Consensus 180 G~~~~~~~~~~~~i~~v~~~~~~pI~vgGGI~~~e~~~~~~~~G-AdgvvVGSai~~ 235 (262)
T 1rd5_A 180 GPRANVNPRVESLIQEVKKVTNKPVAVGFGISKPEHVKQIAQWG-ADGVIIGSAMVR 235 (262)
T ss_dssp CTTSCBCTHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTT-CSEEEECHHHHH
T ss_pred CCCcCCCchHHHHHHHHHhhcCCeEEEECCcCCHHHHHHHHHcC-CCEEEEChHHHh
Confidence 100 111233456778888889999999999 599999999877 999999998774
No 214
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=97.82 E-value=0.00024 Score=60.20 Aligned_cols=133 Identities=14% Similarity=0.102 Sum_probs=89.5
Q ss_pred HHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCC
Q 025135 28 RQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDA 107 (257)
Q Consensus 28 ~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~ 107 (257)
+..++.|.+.|+|.|+++.--|.+.+ ++...+++=+.+|+++++.. .+|+=....+
T Consensus 74 ~~e~~~Ai~~GAdevd~vinig~~~~-------------------g~~~~v~~ei~~v~~a~~~~--~lkvIlet~~--- 129 (220)
T 1ub3_A 74 ALEAALACARGADEVDMVLHLGRAKA-------------------GDLDYLEAEVRAVREAVPQA--VLKVILETGY--- 129 (220)
T ss_dssp HHHHHHHHHTTCSEEEEECCHHHHHT-------------------TCHHHHHHHHHHHHHHSTTS--EEEEECCGGG---
T ss_pred HHHHHHHHHcCCCEEEecccchhhhC-------------------CCHHHHHHHHHHHHHHHcCC--CceEEEecCC---
Confidence 45667888999999999876654433 22456778889999998752 4553222122
Q ss_pred CCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh--CCcEEEeCCC-CH
Q 025135 108 TDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY--QGTFICSGGF-TR 184 (257)
Q Consensus 108 ~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~G~i-t~ 184 (257)
.+.++....++...++| .|||-.+.+ |.. .....+..+.+++.+ ++||-++||+ |.
T Consensus 130 ---l~~e~i~~a~~ia~eaG------ADfVKTsTG-f~~-----------~gat~~dv~~m~~~vg~~v~VkaaGGirt~ 188 (220)
T 1ub3_A 130 ---FSPEEIARLAEAAIRGG------ADFLKTSTG-FGP-----------RGASLEDVALLVRVAQGRAQVKAAGGIRDR 188 (220)
T ss_dssp ---SCHHHHHHHHHHHHHHT------CSEEECCCS-SSS-----------CCCCHHHHHHHHHHHTTSSEEEEESSCCSH
T ss_pred ---CCHHHHHHHHHHHHHhC------CCEEEeCCC-CCC-----------CCCCHHHHHHHHHhhCCCCeEEEECCCCCH
Confidence 23566777888889999 999986542 211 111123444556644 4789999999 89
Q ss_pred HHHHHHHHcCCCc--EEEechHHh
Q 025135 185 ELGIQALAEDGAD--LVAYGRLFI 206 (257)
Q Consensus 185 ~~a~~~l~~g~~D--~V~igR~~i 206 (257)
+++.++++.| ++ .++.||..+
T Consensus 189 ~~al~~i~aG-a~RiG~S~g~~I~ 211 (220)
T 1ub3_A 189 ETALRMLKAG-ASRLGTSSGVALV 211 (220)
T ss_dssp HHHHHHHHTT-CSEEEETTHHHHH
T ss_pred HHHHHHHHCC-CcccchhHHHHHH
Confidence 9999999987 99 666666544
No 215
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=97.82 E-value=0.00016 Score=75.57 Aligned_cols=111 Identities=13% Similarity=0.051 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCC-CCC
Q 025135 77 FLMQLVREVIVAIGADRVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTES-GRP 155 (257)
Q Consensus 77 ~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~-~~~ 155 (257)
-+.++|+.+|++.+..||++|+.+. .+. ...++.++++| +|+|.++...-..-..... ...
T Consensus 979 dl~~~I~~Lk~~~~~~PV~VKlv~~---------~gi---~~~A~~a~~AG------AD~IvVsG~eGGTgasp~~~~~~ 1040 (1479)
T 1ea0_A 979 DLAQLIYDLKQINPDAKVTVKLVSR---------SGI---GTIAAGVAKAN------ADIILISGNSGGTGASPQTSIKF 1040 (1479)
T ss_dssp HHHHHHHHHHHHCTTCEEEEEEECC---------TTH---HHHHHHHHHTT------CSEEEEECTTCCCSSEETTHHHH
T ss_pred HHHHHHHHHHHhCCCCCEEEEEcCC---------CCh---HHHHHHHHHcC------CcEEEEcCCCCCCCCCchhhhcC
Confidence 3668899999988655999999863 111 23577888999 8999886421100000000 000
Q ss_pred CCchhHHHHHHHHHHHh-------CCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhh
Q 025135 156 GTEDEEAQLLRTWRRSY-------QGTFICSGGF-TRELGIQALAEDGADLVAYGRLFIS 207 (257)
Q Consensus 156 ~~~~~~~~~~~~ir~~~-------~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~ia 207 (257)
.+. ++...+..+.+.+ ++|||+.||| |..++.++|.-| +|.|++||+++.
T Consensus 1041 ~G~-Pt~~aL~ev~~al~~~glr~~VpVIAdGGIrtG~DVakALaLG-AdaV~iGTafL~ 1098 (1479)
T 1ea0_A 1041 AGL-PWEMGLSEVHQVLTLNRLRHRVRLRTDGGLKTGRDIVIAAMLG-AEEFGIGTASLI 1098 (1479)
T ss_dssp SCC-CHHHHHHHHHHHHHTTTCTTTSEEEEESSCCSHHHHHHHHHTT-CSEEECCHHHHH
T ss_pred Cch-hHHHHHHHHHHHHHHcCCCCCceEEEECCCCCHHHHHHHHHcC-CCeeeEcHHHHH
Confidence 011 1234455555554 6899999999 999999999998 999999999975
No 216
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=97.78 E-value=0.00014 Score=61.86 Aligned_cols=54 Identities=20% Similarity=0.274 Sum_probs=48.6
Q ss_pred HHHHHHHHHHh-CCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCchHHHHHHc
Q 025135 162 AQLLRTWRRSY-QGTFICSGGF-TRELGIQALAEDGADLVAYGRLFISNPDLVLRFKL 217 (257)
Q Consensus 162 ~~~~~~ir~~~-~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~ 217 (257)
.+.++++++.+ ++||++.||| |++++++++ .| +|.|.+|..++.||++++++.+
T Consensus 168 ~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~-~g-AD~VVVGSa~v~~p~~~~~~v~ 223 (228)
T 3vzx_A 168 IEAVKKTKAVLETSTLFYGGGIKDAETAKQYA-EH-ADVIVVGNAVYEDFDRALKTVA 223 (228)
T ss_dssp HHHHHHHHHHCSSSEEEEESSCCSHHHHHHHH-TT-CSEEEECTHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH-hC-CCEEEEChHHhcCHHHHHHHHH
Confidence 46778899999 7999999999 899999988 55 9999999999999999988764
No 217
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=97.77 E-value=0.00036 Score=60.08 Aligned_cols=51 Identities=6% Similarity=-0.044 Sum_probs=39.1
Q ss_pred HHHHHHHHHHh-----CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCchHHH
Q 025135 162 AQLLRTWRRSY-----QGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNPDLVL 213 (257)
Q Consensus 162 ~~~~~~ir~~~-----~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP~l~~ 213 (257)
..-++++|+.. +.+|.+-||++++.+.++++.| +|.+.+|+++...+|..+
T Consensus 179 l~KI~~lr~~~~~~~~~~~I~VDGGI~~~ti~~~~~aG-AD~~V~GSaIf~a~dp~~ 234 (246)
T 3inp_A 179 LDKAKEISKWISSTDRDILLEIDGGVNPYNIAEIAVCG-VNAFVAGSAIFNSDSYKQ 234 (246)
T ss_dssp HHHHHHHHHHHHHHTSCCEEEEESSCCTTTHHHHHTTT-CCEEEESHHHHTSSCHHH
T ss_pred HHHHHHHHHHHHhcCCCeeEEEECCcCHHHHHHHHHcC-CCEEEEehHHhCCCCHHH
Confidence 34455555543 4678888999999999999988 999999999997655433
No 218
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=97.76 E-value=0.00056 Score=58.42 Aligned_cols=132 Identities=9% Similarity=0.015 Sum_probs=86.2
Q ss_pred HHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCC
Q 025135 28 RQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDA 107 (257)
Q Consensus 28 ~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~ 107 (257)
+..++.|.+.|+|.|+++.--|.+.+ .+++=+.+|+++++...+-+|+=....+
T Consensus 91 ~~e~~~Av~~GAdEID~vinig~~~~-----------------------~v~~ei~~v~~a~~~~g~~lKvIlEt~~--- 144 (234)
T 1n7k_A 91 LVEAQTVLEAGATELDVVPHLSLGPE-----------------------AVYREVSGIVKLAKSYGAVVKVILEAPL--- 144 (234)
T ss_dssp HHHHHHHHHHTCCEEEECCCGGGCHH-----------------------HHHHHHHHHHHHHHHTTCEEEEECCGGG---
T ss_pred HHHHHHHHHcCCCEEEEeccchHHHH-----------------------HHHHHHHHHHHHHhhcCCeEEEEEeccC---
Confidence 45567888999999999865443222 4566677888887542122344322122
Q ss_pred CCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHH--HHHHhCCcEEEeCCC-CH
Q 025135 108 TDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRT--WRRSYQGTFICSGGF-TR 184 (257)
Q Consensus 108 ~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--ir~~~~~pvi~~G~i-t~ 184 (257)
.+.++....++...++| .|||-.+.+ |... .....+..+. +++.+++||-+.||+ |.
T Consensus 145 ---L~~e~i~~a~ria~eaG------ADfVKTsTG-~~~~----------~gAt~~dv~l~~m~~~v~v~VKaaGGirt~ 204 (234)
T 1n7k_A 145 ---WDDKTLSLLVDSSRRAG------ADIVKTSTG-VYTK----------GGDPVTVFRLASLAKPLGMGVKASGGIRSG 204 (234)
T ss_dssp ---SCHHHHHHHHHHHHHTT------CSEEESCCS-SSCC----------CCSHHHHHHHHHHHGGGTCEEEEESSCCSH
T ss_pred ---CCHHHHHHHHHHHHHhC------CCEEEeCCC-CCCC----------CCCCHHHHHHHHHHHHHCCCEEEecCCCCH
Confidence 23466777888889999 999986542 2110 1122233444 777777899999999 89
Q ss_pred HHHHHHHHcCCCc--EEEechHHh
Q 025135 185 ELGIQALAEDGAD--LVAYGRLFI 206 (257)
Q Consensus 185 ~~a~~~l~~g~~D--~V~igR~~i 206 (257)
+++.++++.| ++ .++.||..+
T Consensus 205 ~~al~~i~aG-a~RiG~S~g~~I~ 227 (234)
T 1n7k_A 205 IDAVLAVGAG-ADIIGTSSAVKVL 227 (234)
T ss_dssp HHHHHHHHTT-CSEEEETTHHHHH
T ss_pred HHHHHHHHcC-ccccchHHHHHHH
Confidence 9999999887 99 555665544
No 219
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=97.76 E-value=6.5e-05 Score=69.39 Aligned_cols=111 Identities=11% Similarity=0.029 Sum_probs=74.2
Q ss_pred hHHHHHHHHHHHHhCCC-eEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCcee-EEEeeCCCcccCCCcCCC
Q 025135 76 RFLMQLVREVIVAIGAD-RVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLT-YLHVTQPRYTAYGQTESG 153 (257)
Q Consensus 76 r~~~eiv~aiR~~vg~~-~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd-~i~v~~~~~~~~~~~~~~ 153 (257)
+...+.|++||+++|++ .|.+-.+.. |. .....+.+++.++++.|++.++ .++ ||+ +|-..
T Consensus 216 ~~d~~~v~aiR~~~G~~~~L~vDan~~--~~-~~~~~~~~~A~~~~~~L~~~~~----~~~l~iE--qP~~~-------- 278 (413)
T 1kko_A 216 RWLSDRILSLRSSPRYHPTLHIDVYGT--IG-LIFDMDPVRCAEYIASLEKEAQ----GLPLYIE--GPVDA-------- 278 (413)
T ss_dssp HHHHHHHHHHCSSTTCCCEEEEECTTH--HH-HHTTTCHHHHHHHHHHTGGGGT----TSCEEEE--CCCCC--------
T ss_pred HHHHHHHHHHHHhhCCCCeEEEECCCc--cc-cccCCCHHHHHHHHHHHHhccC----CcceEEE--CCcCC--------
Confidence 44668899999999875 355544420 00 0001357889999999999762 122 665 55210
Q ss_pred CCCCchhHHHHHHHHHHH-----hCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHH
Q 025135 154 RPGTEDEEAQLLRTWRRS-----YQGTFICSGGF-TRELGIQALAEDGADLVAYGRLF 205 (257)
Q Consensus 154 ~~~~~~~~~~~~~~ir~~-----~~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~ 205 (257)
...+.....++.+++. .++||++...+ +++++.++++.+.+|+|.+=-..
T Consensus 279 --~~~~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~ik~~~ 334 (413)
T 1kko_A 279 --GNKPDQIRMLTAITKELTRLGSGVKIVADEWCNTYQDIVDFTDAGSCHMVQIKTPD 334 (413)
T ss_dssp --SSHHHHHHHHHHHHHHHHHHTCCCEEEECTTCCSHHHHHHHHHTTCCSEEEECGGG
T ss_pred --CCCcccHHHHHHHHHhcccCCCCCcEEcCCCCCCHHHHHHHHHhCCCCEEEeCccc
Confidence 0013445667778888 78899888777 89999999999999999874333
No 220
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=97.76 E-value=0.00055 Score=58.30 Aligned_cols=135 Identities=16% Similarity=0.099 Sum_probs=89.8
Q ss_pred HHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCC
Q 025135 28 RQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDA 107 (257)
Q Consensus 28 ~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~ 107 (257)
+.-++.|.+.|+|.|+++.--|.|.+ .+...+.+-|.+|+++++..++ |+=....+.
T Consensus 83 ~~E~~~Ai~~GAdEIDmVinig~lk~-------------------g~~~~v~~ei~~v~~a~~~~~l--KvIiEt~~L-- 139 (231)
T 3ndo_A 83 ATEAELAVAAGATEIDMVIDVGAALA-------------------GDLDAVSADITAVRKAVRAATL--KVIVESAAL-- 139 (231)
T ss_dssp HHHHHHHHHTTCSEEEEECCHHHHHT-------------------TCHHHHHHHHHHHHHHTTTSEE--EEECCHHHH--
T ss_pred HHHHHHHHHcCCCEEEEEeehHhhhc-------------------ccHHHHHHHHHHHHHHccCCce--EEEEECccc--
Confidence 55677889999999999876655533 2345788889999999974333 443221111
Q ss_pred CCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhC--CcEEEeCCC-CH
Q 025135 108 TDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQ--GTFICSGGF-TR 184 (257)
Q Consensus 108 ~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~--~pvi~~G~i-t~ 184 (257)
.+..+.++....|+...++| .|||..+.+ |... .....+.++.+++.++ ++|-++||+ |.
T Consensus 140 ~~~~t~eei~~a~~ia~~aG------ADfVKTSTG-f~~~----------~gAt~edv~lm~~~v~~~v~VKaaGGIrt~ 202 (231)
T 3ndo_A 140 LEFSGEPLLADVCRVARDAG------ADFVKTSTG-FHPS----------GGASVQAVEIMARTVGERLGVKASGGIRTA 202 (231)
T ss_dssp HHHTCHHHHHHHHHHHHHTT------CSEEECCCS-CCTT----------CSCCHHHHHHHHHHHTTTSEEEEESSCCSH
T ss_pred CCCCCHHHHHHHHHHHHHHC------cCEEEcCCC-CCCC----------CCCCHHHHHHHHHHhCCCceEEEeCCCCCH
Confidence 00014566677888889999 999987643 2100 1112345555677664 679999999 89
Q ss_pred HHHHHHHHcCCCcEEEech
Q 025135 185 ELGIQALAEDGADLVAYGR 203 (257)
Q Consensus 185 ~~a~~~l~~g~~D~V~igR 203 (257)
+++.++|+.| ++-++...
T Consensus 203 ~~a~~~i~aG-a~RiGtS~ 220 (231)
T 3ndo_A 203 EQAAAMLDAG-ATRLGLSG 220 (231)
T ss_dssp HHHHHHHHTT-CSEEEESS
T ss_pred HHHHHHHHhc-chhcccch
Confidence 9999999998 99555443
No 221
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=97.73 E-value=0.00037 Score=60.71 Aligned_cols=166 Identities=13% Similarity=0.100 Sum_probs=93.9
Q ss_pred HHHHHHHHHHHHcCCCEEEec------ccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHH-hCCCeEEEE
Q 025135 25 DQYRQAALNAIQAGFDGIEIH------GAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVA-IGADRVGVR 97 (257)
Q Consensus 25 ~~f~~AA~~a~~aGfDgVEIh------~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~-vg~~~v~vr 97 (257)
+.+.+.++...++|.|.|||. .+.|-.+++- +.|-=+.|- +++-++++|+++|+. +. -||.+-
T Consensus 32 ~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a-----~~~AL~~G~----~~~~~~~~v~~ir~~~~~-~Pivlm 101 (267)
T 3vnd_A 32 ELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGA-----NLRSLAAGT----TSSDCFDIITKVRAQHPD-MPIGLL 101 (267)
T ss_dssp HHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHH-----HHHHHHTTC----CHHHHHHHHHHHHHHCTT-CCEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHH-----HHHHHHcCC----CHHHHHHHHHHHHhcCCC-CCEEEE
Confidence 345666777788999999997 4444444432 122212221 234578999999987 43 254332
Q ss_pred --EccC-----C---------CCCCC-CCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcc----------cCCC-
Q 025135 98 --MSPA-----I---------DHLDA-TDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYT----------AYGQ- 149 (257)
Q Consensus 98 --ls~~-----~---------~~~~~-~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~----------~~~~- 149 (257)
.++. + +.++. -...+.++..++.+.+.+.| ++.+-+..|... ..++
T Consensus 102 ~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~g------l~~i~liaP~t~~eri~~i~~~~~gfv 175 (267)
T 3vnd_A 102 LYANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHG------IAPIFIAPPNADADTLKMVSEQGEGYT 175 (267)
T ss_dssp ECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTT------CEEECEECTTCCHHHHHHHHHHCCSCE
T ss_pred ecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcC------CeEEEEECCCCCHHHHHHHHHhCCCcE
Confidence 2220 0 01110 01123344555666666666 554433333211 0000
Q ss_pred ---cCCC---CCC-CchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhh
Q 025135 150 ---TESG---RPG-TEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQALAEDGADLVAYGRLFIS 207 (257)
Q Consensus 150 ---~~~~---~~~-~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~ia 207 (257)
+..+ ... ......+.++.+|+..+.||++.+|| |++++.+.+..| +|.|.+|.+++.
T Consensus 176 Y~vS~~GvTG~~~~~~~~~~~~v~~vr~~~~~pv~vGfGI~~~e~~~~~~~~g-ADgvVVGSaiv~ 240 (267)
T 3vnd_A 176 YLLSRAGVTGTESKAGEPIENILTQLAEFNAPPPLLGFGIAEPEQVRAAIKAG-AAGAISGSAVVK 240 (267)
T ss_dssp EESCCCCCC--------CHHHHHHHHHTTTCCCEEECSSCCSHHHHHHHHHTT-CSEEEECHHHHH
T ss_pred EEEecCCCCCCccCCcHHHHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcC-CCEEEECHHHHH
Confidence 0111 110 11223467788998889999999999 799999899887 999999998873
No 222
>3ijl_A Muconate cycloisomerase; enolase superfamily, dipeptide epimerase, L-Pro-D-Glu, nonpr binding; HET: DGL; 1.50A {Bacteroides thetaiotaomicron} PDB: 3iji_A* 3ijq_A*
Probab=97.72 E-value=0.00018 Score=64.61 Aligned_cols=115 Identities=9% Similarity=0.016 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCC
Q 025135 25 DQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDH 104 (257)
Q Consensus 25 ~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~ 104 (257)
+++++.|+.+.+ ||..+.|+.|.. --.+.|++||++++. .|.+..|. .
T Consensus 136 e~~~~~a~~~~~-g~~~~K~Kvg~~---------------------------~d~~~v~avR~~~~~-~l~vDaN~--~- 183 (338)
T 3ijl_A 136 DVVRAKTKECAG-LFNILKVKLGRD---------------------------NDKEMIETIRSVTDL-PIAVDANQ--G- 183 (338)
T ss_dssp HHHHHHHHHHHT-TCSSEEEECSSS---------------------------CHHHHHHHHHTTCCC-CEEEECTT--C-
T ss_pred HHHHHHHHHHHh-cccEEEEecCcH---------------------------HHHHHHHHHHhhcCC-cEEEECcC--C-
Confidence 344555555544 899999987640 035779999999753 44444442 2
Q ss_pred CCCCCCC-cHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-
Q 025135 105 LDATDSD-PLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF- 182 (257)
Q Consensus 105 ~~~~~~~-~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i- 182 (257)
. +.+++.++++.|++.+ +.|++ +|- .+.....++.+++..++||.+...+
T Consensus 184 ------~t~~~~A~~~~~~l~~~~------i~~iE--eP~--------------~~~d~~~~~~l~~~~~ipIa~dE~~~ 235 (338)
T 3ijl_A 184 ------WKDRQYALDMIHWLKEKG------IVMIE--QPM--------------PKEQLDDIAWVTQQSPLPVFADESLQ 235 (338)
T ss_dssp ------CCCHHHHHHHHHHHHHTT------EEEEE--CCS--------------CTTCHHHHHHHHHTCSSCEEESTTCC
T ss_pred ------CCCHHHHHHHHHHHhhCC------CCEEE--CCC--------------CCCcHHHHHHHHhcCCCCEEECCCCC
Confidence 3 3788999999999999 88887 652 2223456677999999999998887
Q ss_pred CHHHHHHHHHcCCCcEEEe
Q 025135 183 TRELGIQALAEDGADLVAY 201 (257)
Q Consensus 183 t~~~a~~~l~~g~~D~V~i 201 (257)
+..++.+++ +.+|+|.+
T Consensus 236 ~~~~~~~~~--~a~d~i~~ 252 (338)
T 3ijl_A 236 RLGDVAALK--GAFTGINI 252 (338)
T ss_dssp SGGGTGGGB--TTBSEEEE
T ss_pred CHHHHHHHH--hhCCEEEe
Confidence 888877775 67998874
No 223
>2okt_A OSB synthetase, O-succinylbenzoic acid synthetase; enolase, structural genom protein structure initiative, PSI, nysgrc; 1.30A {Staphylococcus aureus subsp} PDB: 2ola_A 3h70_A
Probab=97.69 E-value=0.00011 Score=66.16 Aligned_cols=108 Identities=10% Similarity=-0.061 Sum_probs=75.6
Q ss_pred HHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCCCCCCCCC
Q 025135 32 LNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAIDHLDATDS 110 (257)
Q Consensus 32 ~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~~~~~~~~ 110 (257)
+.+.+.||..+.|..| .+ -.+.|++||+++ ++ .|.+..+. .
T Consensus 135 ~~~~~~G~~~~KiKvg---------------------------~~-d~~~v~avr~~~-~~~~l~vDaN~--~------- 176 (342)
T 2okt_A 135 ESLKATKPTRIKLKWT---------------------------PQ-IMHQIRVLRELD-FHFQLVIDANE--S------- 176 (342)
T ss_dssp HHHHHHCCSEEEEECC---------------------------TT-HHHHHHHHTTSS-SCCEEEEECTT--C-------
T ss_pred HHHHHcCCcEEEEEeC---------------------------HH-HHHHHHHHHHhC-CCCeEEEECCC--C-------
Confidence 3445678998888653 23 458899999999 54 45554442 2
Q ss_pred CcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHH
Q 025135 111 DPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQ 189 (257)
Q Consensus 111 ~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~ 189 (257)
.+.+++ ++++.|++.+ +.||+ +|-. +.....++. +..++||.+...+ +++++.+
T Consensus 177 ~~~~~A-~~~~~l~~~~------i~~iE--qP~~--------------~~d~~~~~~--~~~~ipIa~dEs~~~~~~~~~ 231 (342)
T 2okt_A 177 LDRQDF-TQLQLLAREQ------VLYIE--EPFK--------------DISMLDEVA--DGTIPPIALDEKATSLLDIIN 231 (342)
T ss_dssp CCGGGH-HHHHHHGGGC------EEEEE--CCCS--------------SGGGGGGSC--TTSSCCEEESTTCCCHHHHHH
T ss_pred CCHHHH-HHHHHHhhCC------CcEEE--CCCC--------------CccHHHHHH--hcCCCCEEecCCCCCHHHHHH
Confidence 245778 9999999998 89987 6521 111111122 4567899888887 8999999
Q ss_pred HHHcCCCcEEEec
Q 025135 190 ALAEDGADLVAYG 202 (257)
Q Consensus 190 ~l~~g~~D~V~ig 202 (257)
+++.+.+|+|.+=
T Consensus 232 ~i~~~a~d~i~~k 244 (342)
T 2okt_A 232 LIELYNVKVVVLK 244 (342)
T ss_dssp HHHHSCCCEEEEC
T ss_pred HHHhCCCCEEEEC
Confidence 9999999999874
No 224
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=97.66 E-value=0.001 Score=58.10 Aligned_cols=124 Identities=14% Similarity=0.048 Sum_probs=78.5
Q ss_pred HHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCCCC
Q 025135 31 ALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDATDS 110 (257)
Q Consensus 31 A~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~ 110 (257)
...|.++|+|+|-|..+. |+ ..-+.++++..++ .|- .+++-++
T Consensus 128 v~~A~~~GAD~VlLi~a~-------l~-----------------~~~l~~l~~~a~~-lGl-~~lvev~----------- 170 (272)
T 3qja_A 128 IHEARAHGADMLLLIVAA-------LE-----------------QSVLVSMLDRTES-LGM-TALVEVH----------- 170 (272)
T ss_dssp HHHHHHTTCSEEEEEGGG-------SC-----------------HHHHHHHHHHHHH-TTC-EEEEEES-----------
T ss_pred HHHHHHcCCCEEEEeccc-------CC-----------------HHHHHHHHHHHHH-CCC-cEEEEcC-----------
Confidence 345668999999886543 11 1125566666664 454 3444443
Q ss_pred CcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh--CCcEEEeCCC-CHHHH
Q 025135 111 DPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY--QGTFICSGGF-TRELG 187 (257)
Q Consensus 111 ~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~G~i-t~~~a 187 (257)
+.++.. ...+.| +++|-++........ .. ...+..+++.+ ++||++.||| |++++
T Consensus 171 -t~ee~~----~A~~~G------ad~IGv~~r~l~~~~--------~d---l~~~~~l~~~v~~~~pvVaegGI~t~edv 228 (272)
T 3qja_A 171 -TEQEAD----RALKAG------AKVIGVNARDLMTLD--------VD---RDCFARIAPGLPSSVIRIAESGVRGTADL 228 (272)
T ss_dssp -SHHHHH----HHHHHT------CSEEEEESBCTTTCC--------BC---TTHHHHHGGGSCTTSEEEEESCCCSHHHH
T ss_pred -CHHHHH----HHHHCC------CCEEEECCCcccccc--------cC---HHHHHHHHHhCcccCEEEEECCCCCHHHH
Confidence 233322 233568 888887643211111 11 12345566666 6899999999 79999
Q ss_pred HHHHHcCCCcEEEechHHhhCchHHHH
Q 025135 188 IQALAEDGADLVAYGRLFISNPDLVLR 214 (257)
Q Consensus 188 ~~~l~~g~~D~V~igR~~iadP~l~~k 214 (257)
.++++.| +|.|.+|.+++..+|.-..
T Consensus 229 ~~l~~~G-adgvlVGsal~~a~dp~~~ 254 (272)
T 3qja_A 229 LAYAGAG-ADAVLVGEGLVTSGDPRAA 254 (272)
T ss_dssp HHHHHTT-CSEEEECHHHHTCSCHHHH
T ss_pred HHHHHcC-CCEEEEcHHHhCCCCHHHH
Confidence 9999988 9999999999976665433
No 225
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=97.66 E-value=9e-05 Score=63.66 Aligned_cols=85 Identities=16% Similarity=0.176 Sum_probs=67.3
Q ss_pred HHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHHHcCC
Q 025135 117 LAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQALAEDG 195 (257)
Q Consensus 117 ~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~~g~ 195 (257)
.++++.+.+.| ++.+|+..-.-... ........++.+.+...+|+-+.||+ +.++++++|+.|
T Consensus 34 ~~~a~~~~~~g------ad~lhvvDld~a~~---------~~~~~~~~i~~i~~~~~~pl~vGGGIrs~e~~~~~l~~G- 97 (243)
T 4gj1_A 34 LKKFKEYEKAG------AKELHLVDLTGAKD---------PSKRQFALIEKLAKEVSVNLQVGGGIRSKEEVKALLDCG- 97 (243)
T ss_dssp HHHHHHHHHHT------CCEEEEEEHHHHHC---------GGGCCHHHHHHHHHHCCSEEEEESSCCCHHHHHHHHHTT-
T ss_pred HHHHHHHHHCC------CCEEEEEecCcccc---------cchhHHHHHHHHHHhcCCCeEeccccccHHHHHHHHHcC-
Confidence 35778899999 88888764111000 12233467788888899999999999 899999999998
Q ss_pred CcEEEechHHhhCchHHHHHHc
Q 025135 196 ADLVAYGRLFISNPDLVLRFKL 217 (257)
Q Consensus 196 ~D~V~igR~~iadP~l~~k~~~ 217 (257)
+|-|.++..++.||+|++++.+
T Consensus 98 adkVii~t~a~~~p~li~e~~~ 119 (243)
T 4gj1_A 98 VKRVVIGSMAIKDATLCLEILK 119 (243)
T ss_dssp CSEEEECTTTTTCHHHHHHHHH
T ss_pred CCEEEEccccccCCchHHHHHh
Confidence 9999999999999999988765
No 226
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=97.65 E-value=0.00031 Score=59.66 Aligned_cols=123 Identities=13% Similarity=0.115 Sum_probs=84.7
Q ss_pred hhhHHHHHHHH------------HHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHH
Q 025135 17 TSEIPEVIDQY------------RQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVRE 84 (257)
Q Consensus 17 ~~eI~~ii~~f------------~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~a 84 (257)
.+.|+++.+.| .+.++.|.++|.|+| |.++ + ..++++.
T Consensus 56 ~~~i~~l~~~~~~l~vgaGtvl~~d~~~~A~~aGAd~v--~~p~-----------~-----------------d~~v~~~ 105 (224)
T 1vhc_A 56 ADAIRLLRANRPDFLIAAGTVLTAEQVVLAKSSGADFV--VTPG-----------L-----------------NPKIVKL 105 (224)
T ss_dssp HHHHHHHHHHCTTCEEEEESCCSHHHHHHHHHHTCSEE--ECSS-----------C-----------------CHHHHHH
T ss_pred HHHHHHHHHhCcCcEEeeCcEeeHHHHHHHHHCCCCEE--EECC-----------C-----------------CHHHHHH
Confidence 34566666666 567888999999999 4332 1 1467888
Q ss_pred HHHHhCCC-eEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHH
Q 025135 85 VIVAIGAD-RVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQ 163 (257)
Q Consensus 85 iR~~vg~~-~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~ 163 (257)
.|+ .|.. .++ .. +..+ +....+.| +||+-+. |. ....-..
T Consensus 106 ar~-~g~~~i~G--v~------------t~~e----~~~A~~~G------ad~vk~F-pa-------------~~~gG~~ 146 (224)
T 1vhc_A 106 CQD-LNFPITPG--VN------------NPMA----IEIALEMG------ISAVKFF-PA-------------EASGGVK 146 (224)
T ss_dssp HHH-TTCCEECE--EC------------SHHH----HHHHHHTT------CCEEEET-TT-------------TTTTHHH
T ss_pred HHH-hCCCEEec--cC------------CHHH----HHHHHHCC------CCEEEEe-eC-------------ccccCHH
Confidence 887 7764 234 11 2333 23355789 8999872 20 0000135
Q ss_pred HHHHHHHHh-CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCc
Q 025135 164 LLRTWRRSY-QGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNP 209 (257)
Q Consensus 164 ~~~~ir~~~-~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP 209 (257)
.++.++..+ ++|++..|||+++.+.++++.|.++.|+ |..+...+
T Consensus 147 ~lk~l~~~~~~ipvvaiGGI~~~N~~~~l~agga~~v~-gS~i~~~~ 192 (224)
T 1vhc_A 147 MIKALLGPYAQLQIMPTGGIGLHNIRDYLAIPNIVACG-GSWFVEKK 192 (224)
T ss_dssp HHHHHHTTTTTCEEEEBSSCCTTTHHHHHTSTTBCCEE-ECGGGCHH
T ss_pred HHHHHHhhCCCCeEEEECCcCHHHHHHHHhcCCCEEEE-EchhcCcc
Confidence 677888888 6999999999999999999997799999 88887544
No 227
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=97.65 E-value=0.00025 Score=74.17 Aligned_cols=110 Identities=15% Similarity=0.113 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcC-C-CC
Q 025135 77 FLMQLVREVIVAIGADRVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTE-S-GR 154 (257)
Q Consensus 77 ~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~-~-~~ 154 (257)
-+.++|+.+|++.+..||++|+.+. ... ...++.++++| +|+|.+....- .....+ . ..
T Consensus 1014 dl~~~I~~Lk~~~~~~PV~VKlv~~---------~gi---~~~A~~a~kAG------AD~IvVsG~eG-GTgasp~~~~~ 1074 (1520)
T 1ofd_A 1014 DLAQLIYDLHQINPEAQVSVKLVAE---------IGI---GTIAAGVAKAN------ADIIQISGHDG-GTGASPLSSIK 1074 (1520)
T ss_dssp HHHHHHHHHHHHCTTSEEEEEEECS---------TTH---HHHHHHHHHTT------CSEEEEECTTC-CCSSEEHHHHH
T ss_pred HHHHHHHHHHHhCCCCCEEEEecCC---------CCh---HHHHHHHHHcC------CCEEEEeCCCC-ccCCCcchhhc
Confidence 3668899999988555999999863 111 23567888999 89998864210 000000 0 00
Q ss_pred CCCchhHHHHHHHHHHHh-------CCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhh
Q 025135 155 PGTEDEEAQLLRTWRRSY-------QGTFICSGGF-TRELGIQALAEDGADLVAYGRLFIS 207 (257)
Q Consensus 155 ~~~~~~~~~~~~~ir~~~-------~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~ia 207 (257)
..+.+ +...+..+.+.+ ++|||+.||| |..++.++|.-| +|.|++||+++.
T Consensus 1075 ~~GlP-t~~aL~ev~~al~~~glr~~IpVIAdGGIrtG~DVakALaLG-AdaV~iGTafL~ 1133 (1520)
T 1ofd_A 1075 HAGSP-WELGVTEVHRVLMENQLRDRVLLRADGGLKTGWDVVMAALMG-AEEYGFGSIAMI 1133 (1520)
T ss_dssp HBCCC-HHHHHHHHHHHHHHTTCGGGCEEEEESSCCSHHHHHHHHHTT-CSEEECSHHHHH
T ss_pred CCchh-HHHHHHHHHHHHHhcCCCCCceEEEECCCCCHHHHHHHHHcC-CCeeEEcHHHHH
Confidence 00111 223444555543 6899999999 999999999998 999999999975
No 228
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=97.61 E-value=0.00018 Score=60.52 Aligned_cols=125 Identities=14% Similarity=0.013 Sum_probs=76.3
Q ss_pred HHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEE-EEccCCCCCCCCC
Q 025135 31 ALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGV-RMSPAIDHLDATD 109 (257)
Q Consensus 31 A~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~v-rls~~~~~~~~~~ 109 (257)
++.+.++|.|+|-+|+-.+ ...+.++++++++. |. .+++ =+++
T Consensus 76 ~~~~~~aGad~i~vh~~~~-------------------------~~~~~~~~~~~~~~-g~-~~~~d~l~~--------- 119 (218)
T 3jr2_A 76 SRMAFEAGADWITVSAAAH-------------------------IATIAACKKVADEL-NG-EIQIEIYGN--------- 119 (218)
T ss_dssp HHHHHHHTCSEEEEETTSC-------------------------HHHHHHHHHHHHHH-TC-EEEEECCSS---------
T ss_pred HHHHHhcCCCEEEEecCCC-------------------------HHHHHHHHHHHHHh-CC-ccceeeeec---------
Confidence 3666789999999997531 12355677777764 43 3443 2332
Q ss_pred CCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh--CCcEEEeCCCCHHHH
Q 025135 110 SDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY--QGTFICSGGFTRELG 187 (257)
Q Consensus 110 ~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~G~it~~~a 187 (257)
.+.++. +.+.+.| +||+-+.. ..... . ++.... ...++.+|+.. +.|+++.|||+++.+
T Consensus 120 -~T~~~~----~~~~~~g------~d~v~~~~-~~~~~-~---~g~~~~---~~~l~~i~~~~~~~~pi~v~GGI~~~~~ 180 (218)
T 3jr2_A 120 -WTMQDA----KAWVDLG------ITQAIYHR-SRDAE-L---AGIGWT---TDDLDKMRQLSALGIELSITGGIVPEDI 180 (218)
T ss_dssp -CCHHHH----HHHHHTT------CCEEEEEC-CHHHH-H---HTCCSC---HHHHHHHHHHHHTTCEEEEESSCCGGGG
T ss_pred -CCHHHH----HHHHHcC------ccceeeee-ccccc-c---CCCcCC---HHHHHHHHHHhCCCCCEEEECCCCHHHH
Confidence 123332 3344558 88875532 11110 0 000011 23345555553 789999999999999
Q ss_pred HHHHHcCCCcEEEechHHhhCchH
Q 025135 188 IQALAEDGADLVAYGRLFISNPDL 211 (257)
Q Consensus 188 ~~~l~~g~~D~V~igR~~iadP~l 211 (257)
.++++.| +|.|.+||++...+|.
T Consensus 181 ~~~~~aG-Ad~vvvGsaI~~a~dp 203 (218)
T 3jr2_A 181 YLFEGIK-TKTFIAGRALAGAEGQ 203 (218)
T ss_dssp GGGTTSC-EEEEEESGGGSHHHHH
T ss_pred HHHHHcC-CCEEEEchhhcCCCCH
Confidence 9999888 9999999999865443
No 229
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=97.60 E-value=0.00015 Score=66.98 Aligned_cols=142 Identities=10% Similarity=0.071 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHHcC-CCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccC
Q 025135 24 IDQYRQAALNAIQAG-FDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPA 101 (257)
Q Consensus 24 i~~f~~AA~~a~~aG-fDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~ 101 (257)
.+.+.+.|+.+.+.| |..+++..|.. +-.++.-.+...+.|++||+++|++ .|.+..+..
T Consensus 181 ~~~~~~~a~~~~~~G~~~~~KiKvG~~------------------~~~~~~~~~~d~~~v~avR~~~G~~~~l~vDaN~~ 242 (413)
T 1kcz_A 181 VDKMIIKEADVLPHALINNVEEKLGLK------------------GEKLLEYVKWLRDRIIKLRVREDYAPIFHIDVYGT 242 (413)
T ss_dssp HHHHHHTTCSEEEECCCCCCCCCCCTT------------------SHHHHHHHHHHHHHHHHHCSSTTCCCEEEEECTTH
T ss_pred HHHHHHHHHHHHHhcchhheeeccCCC------------------ccchhhHHHHHHHHHHHHHHhcCCCceEEEecCCC
Confidence 344555555555667 88888764420 0002222344678899999999976 455554421
Q ss_pred --CCCCCCCCCCcHHHHHHHHHHHHhc--CCccCCcee-EEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHH-----
Q 025135 102 --IDHLDATDSDPLGLGLAVIQGLNKL--QIDQGAKLT-YLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRS----- 171 (257)
Q Consensus 102 --~~~~~~~~~~~~~~~~~l~~~L~~~--G~~~~~~vd-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~----- 171 (257)
+.| ..+.+++.++++.|++. + +. ||+ +|-... ..+.....++.+++.
T Consensus 243 ~~~~~-----~~~~~~a~~~~~~L~~~~~~------i~~~iE--qP~~~~----------~~~~d~~~~~~l~~~l~~~g 299 (413)
T 1kcz_A 243 IGAAF-----DVDIKAMADYIQTLAEAAKP------FHLRIE--GPMDVE----------DRQKQMEAMRDLRAELDGRG 299 (413)
T ss_dssp HHHHT-----TTCHHHHHHHHHHHHHHHTT------SCEEEE--CSBCCS----------SHHHHHHHHHHHHHHHHHHT
T ss_pred ccccc-----CCCHHHHHHHHHHHHhhcCC------cceEEe--cCCCCC----------CCcccHHHHHHHHHhhhcCC
Confidence 000 02478899999999998 6 55 776 552100 023345666778888
Q ss_pred hCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHh
Q 025135 172 YQGTFICSGGF-TRELGIQALAEDGADLVAYGRLFI 206 (257)
Q Consensus 172 ~~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~i 206 (257)
.++||++...+ +++++.++++.+.+|+|.+=-..+
T Consensus 300 ~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~ 335 (413)
T 1kcz_A 300 VDAELVADEWCNTVEDVKFFTDNKAGHMVQIKTPDL 335 (413)
T ss_dssp CCEEEEECTTCCSHHHHHHHHHTTCSSEEEECTGGG
T ss_pred CCCcEEeCCCcCCHHHHHHHHHhCCCCEEEeCcccc
Confidence 67898887777 899999999999999998854443
No 230
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=97.59 E-value=0.00021 Score=66.29 Aligned_cols=102 Identities=7% Similarity=0.021 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHh-------CCC-eEEEEEccCCCCCCC-------C-CCCcHHHHHHHHHHHHh-cCCccCCceeEEEee
Q 025135 78 LMQLVREVIVAI-------GAD-RVGVRMSPAIDHLDA-------T-DSDPLGLGLAVIQGLNK-LQIDQGAKLTYLHVT 140 (257)
Q Consensus 78 ~~eiv~aiR~~v-------g~~-~v~vrls~~~~~~~~-------~-~~~~~~~~~~l~~~L~~-~G~~~~~~vd~i~v~ 140 (257)
..+.|++||+++ |++ .|.+.....+.|++. . ...+.++++++++.|++ .+ +.||+
T Consensus 218 d~~~l~~vreai~~~g~~~G~dv~l~vDaaas~~~~~~~Y~~~~~n~~~~t~~~ai~~~~~L~~~~~------i~~iE-- 289 (431)
T 2fym_A 218 NAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYP------IVSIE-- 289 (431)
T ss_dssp HHHHHHHHHHHHHHTTCCBTTTBEEEEECCGGGGEETTEEEEGGGTTEEECHHHHHHHHHHHHHHSC------EEEEE--
T ss_pred hHHHHHHHHHHHHHhccCCCCccEEEEeechhhccccCceeeccCCCCCCCHHHHHHHHHHHHHhCC------ceEEE--
Confidence 457788888888 876 566665221111110 0 11357889999999998 88 88887
Q ss_pred CCCcccCCCcCCCCCCCchhHHHHHHHHHHHh--CCcEEEeC-CC-CHHHHHHHHHcCCCcEEEe
Q 025135 141 QPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY--QGTFICSG-GF-TRELGIQALAEDGADLVAY 201 (257)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~G-~i-t~~~a~~~l~~g~~D~V~i 201 (257)
+|- .+..+...+.+++.+ ++||++.. .+ +++++.++++.+.+|+|.+
T Consensus 290 ePl--------------~~~d~~~~~~l~~~~~~~ipIa~dEl~~~~~~~~~~~i~~~a~d~i~i 340 (431)
T 2fym_A 290 DGL--------------DESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILI 340 (431)
T ss_dssp SCS--------------CTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEE
T ss_pred CCC--------------CcccHHHHHHHHHHhCCCCeEEeCCcccCCHHHHHHHHHhCCCCEEEE
Confidence 652 222345667788888 78888766 55 7999999999999999987
No 231
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=97.57 E-value=0.0012 Score=58.38 Aligned_cols=140 Identities=15% Similarity=0.152 Sum_probs=88.9
Q ss_pred HHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCc-hhhHhhHHHHHHHHHHHHh-CCC-eEEEEEccC
Q 025135 25 DQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGS-IENRCRFLMQLVREVIVAI-GAD-RVGVRMSPA 101 (257)
Q Consensus 25 ~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs-~enR~r~~~eiv~aiR~~v-g~~-~v~vrls~~ 101 (257)
++..+.+++..++|++||.|..+++ .+|....||. +.....+ .+-|++++++. +.+ .|..|....
T Consensus 94 ~~~~~~v~~l~~aGa~gv~iEd~~~-----------~k~cgH~~gk~L~p~~~~-~~~I~Aa~~a~~~~~~~i~aRtda~ 161 (295)
T 1xg4_A 94 FNVARTVKSMIKAGAAGLHIEDQVG-----------AKRSGHRPNKAIVSKEEM-VDRIRAAVDAKTDPDFVIMARTDAL 161 (295)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECBCS-----------SCCCTTSSSCCBCCHHHH-HHHHHHHHHHCSSTTSEEEEEECCH
T ss_pred HHHHHHHHHHHHcCCeEEEECCCCC-----------CcccCCCCCCccCCHHHH-HHHHHHHHHhccCCCcEEEEecHHh
Confidence 3456677778889999999998862 3556666664 3333333 34455555553 333 466666421
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCC
Q 025135 102 IDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGG 181 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~ 181 (257)
. ....+++++-++.++++| +|.|-+... . ..+.++.|.+.+++|+++|.-
T Consensus 162 --~-----~~gl~~ai~ra~ay~eAG------Ad~i~~e~~---------------~--~~~~~~~i~~~~~iP~~~N~~ 211 (295)
T 1xg4_A 162 --A-----VEGLDAAIERAQAYVEAG------AEMLFPEAI---------------T--ELAMYRQFADAVQVPILANIT 211 (295)
T ss_dssp --H-----HHCHHHHHHHHHHHHHTT------CSEEEETTC---------------C--SHHHHHHHHHHHCSCBEEECC
T ss_pred --h-----hcCHHHHHHHHHHHHHcC------CCEEEEeCC---------------C--CHHHHHHHHHHcCCCEEEEec
Confidence 0 013578889999999999 777765431 0 134567788999999877643
Q ss_pred ---CCHHHHHHHHHcCCCcEEEechHHh
Q 025135 182 ---FTRELGIQALAEDGADLVAYGRLFI 206 (257)
Q Consensus 182 ---it~~~a~~~l~~g~~D~V~igR~~i 206 (257)
-++....+-|++-+++.|+++..++
T Consensus 212 ~~g~~p~~~~~eL~~~G~~~v~~~~~~~ 239 (295)
T 1xg4_A 212 EFGATPLFTTDELRSAHVAMALYPLSAF 239 (295)
T ss_dssp SSSSSCCCCHHHHHHTTCSEEEESSHHH
T ss_pred ccCCCCCCCHHHHHHcCCCEEEEChHHH
Confidence 2333222334454599999999887
No 232
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=97.57 E-value=0.0022 Score=55.39 Aligned_cols=49 Identities=14% Similarity=0.218 Sum_probs=42.2
Q ss_pred HHHHHHHHH-HhC-CcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhh--CchH
Q 025135 162 AQLLRTWRR-SYQ-GTFICSGGF-TRELGIQALAEDGADLVAYGRLFIS--NPDL 211 (257)
Q Consensus 162 ~~~~~~ir~-~~~-~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~ia--dP~l 211 (257)
.+.++.+++ ..+ +|||+.||| |++++..+++-| ||.|.+|.+... ||..
T Consensus 165 ~~~L~~i~~~~~~~vPVI~~GGI~tpsDAa~AmeLG-AdgVlVgSAI~~a~dP~~ 218 (268)
T 2htm_A 165 RALLELFAREKASLPPVVVDAGLGLPSHAAEVMELG-LDAVLVNTAIAEAQDPPA 218 (268)
T ss_dssp HHHHHHHHHTTTTSSCBEEESCCCSHHHHHHHHHTT-CCEEEESHHHHTSSSHHH
T ss_pred HHHHHHHHHhcCCCCeEEEeCCCCCHHHHHHHHHcC-CCEEEEChHHhCCCCHHH
Confidence 455777888 677 999999999 999999999998 999999999985 5753
No 233
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=97.57 E-value=0.00026 Score=60.59 Aligned_cols=121 Identities=12% Similarity=0.107 Sum_probs=76.3
Q ss_pred HHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHh--------CCCeEEEEEccCCC
Q 025135 32 LNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAI--------GADRVGVRMSPAID 103 (257)
Q Consensus 32 ~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~v--------g~~~v~vrls~~~~ 103 (257)
..+.++|+|+|-+|.... .-+.++++.+|+.- |. .+++=+++.
T Consensus 86 ~~~~~aGAd~itvH~ea~--------------------------~~~~~~i~~i~~~~~~~~~~~~g~-~~gv~l~p~-- 136 (237)
T 3cu2_A 86 KAVVANGANLVTLQLEQY--------------------------HDFALTIEWLAKQKTTYANQVYPV-LIGACLCPE-- 136 (237)
T ss_dssp HHHHHTTCSEEEEETTCT--------------------------TSHHHHHHHHTTCEEEETTEEEEC-EEEEEECTT--
T ss_pred HHHHHcCCCEEEEecCCc--------------------------ccHHHHHHHHHhcccccccccCCc-eEEEEEeCC--
Confidence 345679999999997650 11456677777641 22 467767653
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEe--eCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh-----CCcE
Q 025135 104 HLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHV--TQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY-----QGTF 176 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~-----~~pv 176 (257)
++.+.. +.+.+ + +|++-+ .+|.+.+.. ..+...+.++.+|+.. +.+|
T Consensus 137 -------Tp~~~l----~~~l~-~------~D~vlvMsv~pgfggq~--------f~~~~l~ki~~lr~~~~~~~~~~~I 190 (237)
T 3cu2_A 137 -------TPISEL----EPYLD-Q------IDVIQLLTLDPRNGTKY--------PSELILDRVIQVEKRLGNRRVEKLI 190 (237)
T ss_dssp -------SCGGGG----TTTTT-T------CSEEEEESEETTTTEEC--------CHHHHHHHHHHHHHHHGGGGGGCEE
T ss_pred -------ChHHHH----HHHhh-c------CceeeeeeeccCcCCee--------cChhHHHHHHHHHHHHHhcCCCceE
Confidence 222211 11111 3 667644 135443322 1233344556666665 5788
Q ss_pred EEeCCCCHHHHHHHHH--cCCCcEEEechHHhhC
Q 025135 177 ICSGGFTRELGIQALA--EDGADLVAYGRLFISN 208 (257)
Q Consensus 177 i~~G~it~~~a~~~l~--~g~~D~V~igR~~iad 208 (257)
.+-||++.+.+.++++ .| +|.+.+|+++...
T Consensus 191 ~vdGGI~~~~~~~~~~~~aG-ad~~VvGSaIf~~ 223 (237)
T 3cu2_A 191 NIDGSMTLELAKYFKQGTHQ-IDWLVSGSALFSG 223 (237)
T ss_dssp EEESSCCHHHHHHHHHSSSC-CCCEEECGGGGSS
T ss_pred EEECCcCHHHHHHHHHhCCC-CcEEEEeeHHhCC
Confidence 8899999999999999 87 9999999999974
No 234
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=97.57 E-value=0.0063 Score=51.59 Aligned_cols=49 Identities=24% Similarity=0.268 Sum_probs=41.8
Q ss_pred hhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhC
Q 025135 159 DEEAQLLRTWRRSYQGTFICSGGF-TRELGIQALAEDGADLVAYGRLFISN 208 (257)
Q Consensus 159 ~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~iad 208 (257)
+.....++.+++.+++||++.||+ +++++.++++.| +|.|.+|++++..
T Consensus 177 ~~~~~~i~~l~~~~~~pi~~~GGI~~~e~i~~~~~~G-ad~vivGsai~~~ 226 (248)
T 1geq_A 177 KTAYDLLRRAKRICRNKVAVGFGVSKREHVVSLLKEG-ANGVVVGSALVKI 226 (248)
T ss_dssp HHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTT-CSEEEECHHHHHH
T ss_pred hhHHHHHHHHHhhcCCCEEEEeecCCHHHHHHHHHcC-CCEEEEcHHHHhh
Confidence 334567788888889999999999 569999999887 9999999999865
No 235
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=97.53 E-value=0.00074 Score=56.50 Aligned_cols=47 Identities=21% Similarity=0.316 Sum_probs=41.0
Q ss_pred HHHHHHHHHh-CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCchH
Q 025135 163 QLLRTWRRSY-QGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNPDL 211 (257)
Q Consensus 163 ~~~~~ir~~~-~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP~l 211 (257)
..++.++..+ ++|+++.|||+++++.++++.| +|.|+++..++. +||
T Consensus 140 ~~lk~l~~~~~~ipvvaiGGI~~~n~~~~l~aG-a~~vavgSai~~-~d~ 187 (207)
T 2yw3_A 140 RVLRAYAEVFPEVRFLPTGGIKEEHLPHYAALP-NLLAVGGSWLLQ-GNL 187 (207)
T ss_dssp HHHHHHHHHCTTCEEEEBSSCCGGGHHHHHTCS-SBSCEEESGGGS-SCH
T ss_pred HHHHHHHhhCCCCcEEEeCCCCHHHHHHHHhCC-CcEEEEehhhhC-CCH
Confidence 4567788888 7999999999999999999988 999999999987 553
No 236
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=97.49 E-value=0.00014 Score=63.38 Aligned_cols=51 Identities=20% Similarity=0.145 Sum_probs=41.9
Q ss_pred HHHHHHHHHhCCcE--EEeCCC-CHHHHHHHHHcCCCcEEEechHHhh--CchHHHH
Q 025135 163 QLLRTWRRSYQGTF--ICSGGF-TRELGIQALAEDGADLVAYGRLFIS--NPDLVLR 214 (257)
Q Consensus 163 ~~~~~ir~~~~~pv--i~~G~i-t~~~a~~~l~~g~~D~V~igR~~ia--dP~l~~k 214 (257)
+.++.+++..++|| |++|+| |++++.++++.| ||.|++||+.+. ||....+
T Consensus 188 elI~~Ike~~~IPVV~IAnGGI~TpedA~~~le~G-aDGVmVGrAI~~s~DP~~~Ak 243 (291)
T 3o07_A 188 SLLKDVLEKGKLPVVNFAAGGVATPADAALLMQLG-CDGVFVGSGIFKSSNPVRLAT 243 (291)
T ss_dssp HHHHHHHHHTSCSSCEEBCSSCCSHHHHHHHHHTT-CSCEEECGGGGGSSCHHHHHH
T ss_pred HHHHHHHHccCCCEEEecCCCCCCHHHHHHHHHhC-CCEEEEchHHhCCCCHHHHHH
Confidence 45677888888997 468999 999999999776 999999999997 5655433
No 237
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=97.41 E-value=0.0034 Score=52.05 Aligned_cols=45 Identities=16% Similarity=0.130 Sum_probs=39.3
Q ss_pred HHHHHHHHHhC--CcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhC
Q 025135 163 QLLRTWRRSYQ--GTFICSGGFTRELGIQALAEDGADLVAYGRLFISN 208 (257)
Q Consensus 163 ~~~~~ir~~~~--~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iad 208 (257)
..++.+++.++ +||++.||++++++.++++.| +|.|.+|+.++..
T Consensus 136 ~~~~~l~~~~~~~ipvia~GGI~~~~i~~~~~~G-a~gv~vGsai~~~ 182 (212)
T 2v82_A 136 QYIKALKAVLPSDIAVFAVGGVTPENLAQWIDAG-CAGAGLGSDLYRA 182 (212)
T ss_dssp HHHHHHHTTSCTTCEEEEESSCCTTTHHHHHHHT-CSEEEECTTTCCT
T ss_pred HHHHHHHHhccCCCeEEEeCCCCHHHHHHHHHcC-CCEEEEChHHhCC
Confidence 55667777776 899999999999999999987 9999999999976
No 238
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=97.40 E-value=0.001 Score=56.61 Aligned_cols=123 Identities=16% Similarity=0.203 Sum_probs=77.7
Q ss_pred HHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCCCCC
Q 025135 32 LNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDATDSD 111 (257)
Q Consensus 32 ~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~~ 111 (257)
+.+.++|+|+|-+|.-. +. .-+.++++.+|+. |. .+++=+++. .
T Consensus 74 ~~~~~aGAd~itvh~Ea---------~~----------------~~~~~~i~~i~~~-G~-k~gv~lnp~---------t 117 (231)
T 3ctl_A 74 AQLARAGADFITLHPET---------IN----------------GQAFRLIDEIRRH-DM-KVGLILNPE---------T 117 (231)
T ss_dssp HHHHHHTCSEEEECGGG---------CT----------------TTHHHHHHHHHHT-TC-EEEEEECTT---------C
T ss_pred HHHHHcCCCEEEECccc---------CC----------------ccHHHHHHHHHHc-CC-eEEEEEECC---------C
Confidence 45678999999999532 00 0145778888863 43 577777763 2
Q ss_pred cHHHHHHHHHHHHhcCCccCCceeEEEe--eCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh-----CCcEEEeCCCCH
Q 025135 112 PLGLGLAVIQGLNKLQIDQGAKLTYLHV--TQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY-----QGTFICSGGFTR 184 (257)
Q Consensus 112 ~~~~~~~l~~~L~~~G~~~~~~vd~i~v--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~-----~~pvi~~G~it~ 184 (257)
+.+. ++.+.+ + +|++-+ .+|.+.+.. ..+.....++.+|+.. +.+|.+-||+++
T Consensus 118 p~~~----~~~~l~-~------~D~VlvmsV~pGfggQ~--------f~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~~ 178 (231)
T 3ctl_A 118 PVEA----MKYYIH-K------ADKITVMTVDPGFAGQP--------FIPEMLDKLAELKAWREREGLEYEIEVDGSCNQ 178 (231)
T ss_dssp CGGG----GTTTGG-G------CSEEEEESSCTTCSSCC--------CCTTHHHHHHHHHHHHHHHTCCCEEEEESCCST
T ss_pred cHHH----HHHHHh-c------CCEEEEeeeccCcCCcc--------ccHHHHHHHHHHHHHHhccCCCceEEEECCcCH
Confidence 3222 122222 3 666654 234443322 1223334455555554 578888899999
Q ss_pred HHHHHHHHcCCCcEEEec-hHHhhCch
Q 025135 185 ELGIQALAEDGADLVAYG-RLFISNPD 210 (257)
Q Consensus 185 ~~a~~~l~~g~~D~V~ig-R~~iadP~ 210 (257)
+.+.++++.| +|.+.+| +++...+|
T Consensus 179 ~~~~~~~~aG-Ad~~V~G~saif~~~d 204 (231)
T 3ctl_A 179 ATYEKLMAAG-ADVFIVGTSGLFNHAE 204 (231)
T ss_dssp TTHHHHHHHT-CCEEEECTTTTGGGCS
T ss_pred HHHHHHHHcC-CCEEEEccHHHhCCCC
Confidence 9999999998 9999999 99997544
No 239
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=97.40 E-value=0.0019 Score=55.73 Aligned_cols=124 Identities=15% Similarity=0.077 Sum_probs=79.4
Q ss_pred HHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCCCC
Q 025135 31 ALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDATDS 110 (257)
Q Consensus 31 A~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~ 110 (257)
...|.++|+|+|-|.... + . ..+.++++..++ .|- .+.+-++.
T Consensus 121 i~~a~~~GAD~VlL~~~~-------l----------------~--~~l~~l~~~a~~-lGl-~~lvev~~---------- 163 (254)
T 1vc4_A 121 LEEARAFGASAALLIVAL-------L----------------G--ELTGAYLEEARR-LGL-EALVEVHT---------- 163 (254)
T ss_dssp HHHHHHTTCSEEEEEHHH-------H----------------G--GGHHHHHHHHHH-HTC-EEEEEECS----------
T ss_pred HHHHHHcCCCEEEECccc-------h----------------H--HHHHHHHHHHHH-CCC-eEEEEECC----------
Confidence 355788999999876543 1 1 245666666554 453 23344542
Q ss_pred CcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh-----CCcEEEeCCC-CH
Q 025135 111 DPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY-----QGTFICSGGF-TR 184 (257)
Q Consensus 111 ~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~-----~~pvi~~G~i-t~ 184 (257)
.++. +...+.| .+++-+....+.... .. ......+.+.+ ++|+++.||| |+
T Consensus 164 --~~E~----~~a~~~g------ad~IGvn~~~l~~~~--------~d---l~~~~~L~~~i~~~~~~~~vIAegGI~s~ 220 (254)
T 1vc4_A 164 --EREL----EIALEAG------AEVLGINNRDLATLH--------IN---LETAPRLGRLARKRGFGGVLVAESGYSRK 220 (254)
T ss_dssp --HHHH----HHHHHHT------CSEEEEESBCTTTCC--------BC---TTHHHHHHHHHHHTTCCSEEEEESCCCSH
T ss_pred --HHHH----HHHHHcC------CCEEEEccccCcCCC--------CC---HHHHHHHHHhCccccCCCeEEEEcCCCCH
Confidence 3332 2345567 778877654332211 11 12233444544 6899999999 79
Q ss_pred HHHHHHHHcCCCcEEEechHHhhCchHHHHHH
Q 025135 185 ELGIQALAEDGADLVAYGRLFISNPDLVLRFK 216 (257)
Q Consensus 185 ~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~ 216 (257)
+++.++.+ | +|.|.+|.+++..+|....++
T Consensus 221 ~dv~~l~~-G-a~gvlVGsAl~~~~d~~~~~~ 250 (254)
T 1vc4_A 221 EELKALEG-L-FDAVLIGTSLMRAPDLEAALR 250 (254)
T ss_dssp HHHHTTTT-T-CSEEEECHHHHTSSCHHHHHH
T ss_pred HHHHHHHc-C-CCEEEEeHHHcCCCCHHHHHH
Confidence 99999998 6 999999999999888776654
No 240
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=97.38 E-value=0.003 Score=53.59 Aligned_cols=132 Identities=12% Similarity=0.050 Sum_probs=82.4
Q ss_pred HHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCC
Q 025135 29 QAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDAT 108 (257)
Q Consensus 29 ~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~ 108 (257)
..++. .+.|+|.|+++.--|+|.+ ++...+.+=|.+|+++++.. .+|+=....+
T Consensus 71 ~E~~~-i~~GAdEID~Vinig~~~~-------------------g~~~~v~~ei~~v~~a~~~~--~lKvIlEt~~---- 124 (226)
T 1vcv_A 71 ALVSR-LAEVADEIDVVAPIGLVKS-------------------RRWAEVRRDLISVVGAAGGR--VVKVITEEPY---- 124 (226)
T ss_dssp HHHHH-HTTTCSEEEEECCHHHHHT-------------------TCHHHHHHHHHHHHHHTTTS--EEEEECCGGG----
T ss_pred HHHHH-HHCCCCEEEEecchhhhcC-------------------CCHHHHHHHHHHHHHHHcCC--CceEEEeccC----
Confidence 34455 7899999999877666543 23457888899999999753 4553222222
Q ss_pred CCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHH---hC--CcEEEeCCC-
Q 025135 109 DSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRS---YQ--GTFICSGGF- 182 (257)
Q Consensus 109 ~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~---~~--~pvi~~G~i- 182 (257)
.+.++....++...++| .|||-.+.+..........+. +.....+..+.+++. ++ ++|-++||+
T Consensus 125 --Lt~eei~~a~~ia~eaG------ADfVKTSTGf~~~~~~~~~~~--~~gAt~~dv~lm~~~i~~~g~~v~vKaaGGir 194 (226)
T 1vcv_A 125 --LRDEERYTLYDIIAEAG------AHFIKSSTGFAEEAYAARQGN--PVHSTPERAAAIARYIKEKGYRLGVKMAGGIR 194 (226)
T ss_dssp --CCHHHHHHHHHHHHHHT------CSEEECCCSCCCHHHHHHTTC--CSSCCHHHHHHHHHHHHHHTCCCEEEEESSCC
T ss_pred --CCHHHHHHHHHHHHHcC------CCEEEeCCCCCccccccccCC--CCCCCHHHHHHHHHHHHHhCCCceEEEeCCCC
Confidence 23566777888889999 999987643210000000000 011112233334444 55 789999999
Q ss_pred CHHHHHHHHHc---CCCc
Q 025135 183 TRELGIQALAE---DGAD 197 (257)
Q Consensus 183 t~~~a~~~l~~---g~~D 197 (257)
|.+++.++++. | ++
T Consensus 195 t~~~al~~i~a~~~G-a~ 211 (226)
T 1vcv_A 195 TREQAKAIVDAIGWG-ED 211 (226)
T ss_dssp SHHHHHHHHHHHCSC-SC
T ss_pred CHHHHHHHHHHHHCC-CC
Confidence 89999999999 8 66
No 241
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=97.36 E-value=0.001 Score=55.93 Aligned_cols=125 Identities=14% Similarity=0.102 Sum_probs=83.5
Q ss_pred hhhHHHHHHHH------------HHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHH
Q 025135 17 TSEIPEVIDQY------------RQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVRE 84 (257)
Q Consensus 17 ~~eI~~ii~~f------------~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~a 84 (257)
.+-|+++.+.| ...++.|.++|.|+| |.++ + ..+++++
T Consensus 55 ~~~i~~l~~~~~~~~vgagtvi~~d~~~~A~~aGAd~v--~~p~-----------~-----------------d~~v~~~ 104 (214)
T 1wbh_A 55 VDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFA--ISPG-----------L-----------------TEPLLKA 104 (214)
T ss_dssp HHHHHHHHHHCTTSEEEEESCCSHHHHHHHHHHTCSCE--EESS-----------C-----------------CHHHHHH
T ss_pred HHHHHHHHHHCcCCEEeeCEEEEHHHHHHHHHcCCCEE--EcCC-----------C-----------------CHHHHHH
Confidence 34566666666 467888999999998 3332 1 1356666
Q ss_pred HHHHhCCCe-EEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHH
Q 025135 85 VIVAIGADR-VGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQ 163 (257)
Q Consensus 85 iR~~vg~~~-v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~ 163 (257)
.++ .|.+. ++ .+ +..+. ....+.| +||+-+. |. ....-..
T Consensus 105 ~~~-~g~~~i~G--~~------------t~~e~----~~A~~~G------ad~v~~F-pa-------------~~~gG~~ 145 (214)
T 1wbh_A 105 ATE-GTIPLIPG--IS------------TVSEL----MLGMDYG------LKEFKFF-PA-------------EANGGVK 145 (214)
T ss_dssp HHH-SSSCEEEE--ES------------SHHHH----HHHHHTT------CCEEEET-TT-------------TTTTHHH
T ss_pred HHH-hCCCEEEe--cC------------CHHHH----HHHHHCC------CCEEEEe-cC-------------ccccCHH
Confidence 554 66542 34 11 23332 3345789 8999873 20 0000135
Q ss_pred HHHHHHHHh-CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCchH
Q 025135 164 LLRTWRRSY-QGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNPDL 211 (257)
Q Consensus 164 ~~~~ir~~~-~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP~l 211 (257)
.++.++..+ ++|++..|||+++.+.++++.|.++.|+ |..+...+++
T Consensus 146 ~lk~i~~~~~~ipvvaiGGI~~~n~~~~l~agg~~~v~-gS~i~~~~~~ 193 (214)
T 1wbh_A 146 ALQAIAGPFSQVRFCPTGGISPANYRDYLALKSVLCIG-GSWLVPADAL 193 (214)
T ss_dssp HHHHHHTTCTTCEEEEBSSCCTTTHHHHHTSTTBSCEE-EGGGSCHHHH
T ss_pred HHHHHhhhCCCCeEEEECCCCHHHHHHHHhcCCCeEEE-eccccChhhh
Confidence 677888888 7999999999999999999997799999 9888765543
No 242
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=97.35 E-value=0.0095 Score=52.67 Aligned_cols=138 Identities=16% Similarity=0.079 Sum_probs=79.4
Q ss_pred HHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCCC
Q 025135 30 AALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDATD 109 (257)
Q Consensus 30 AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~ 109 (257)
.++.|.++|+|+|.++.-- |.|. +-......+.+++++.++. |- ++.+-+-+.... ...
T Consensus 113 ~ve~a~~~GAdaV~vlv~~--------------~~d~---~~~~~~~~i~~v~~~~~~~-G~-p~lv~~~~~g~~--v~~ 171 (304)
T 1to3_A 113 NAQAVKRDGAKALKLLVLW--------------RSDE---DAQQRLNMVKEFNELCHSN-GL-LSIIEPVVRPPR--CGD 171 (304)
T ss_dssp CHHHHHHTTCCEEEEEEEE--------------CTTS---CHHHHHHHHHHHHHHHHTT-TC-EEEEEEEECCCS--SCS
T ss_pred hHHHHHHcCCCEEEEEEEc--------------CCCc---cHHHHHHHHHHHHHHHHHc-CC-cEEEEEECCCCc--ccc
Confidence 4567788999999977533 1110 0022233344444443322 22 555554332111 111
Q ss_pred CCcH-HHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHH----hCCc-EEEeCCCC
Q 025135 110 SDPL-GLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRS----YQGT-FICSGGFT 183 (257)
Q Consensus 110 ~~~~-~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~----~~~p-vi~~G~it 183 (257)
.... +...+.++.+.+.| +||+-+..+.+ .. .. .+.+..+.+. .++| |++.||++
T Consensus 172 ~~~~~~~v~~aa~~a~~lG------aD~iKv~~~~~-~~---------g~---~~~~~~vv~~~~~~~~~P~Vv~aGG~~ 232 (304)
T 1to3_A 172 KFDREQAIIDAAKELGDSG------ADLYKVEMPLY-GK---------GA---RSDLLTASQRLNGHINMPWVILSSGVD 232 (304)
T ss_dssp CCCHHHHHHHHHHHHTTSS------CSEEEECCGGG-GC---------SC---HHHHHHHHHHHHHTCCSCEEECCTTSC
T ss_pred CCChhHHHHHHHHHHHHcC------CCEEEeCCCcC-CC---------CC---HHHHHHHHHhccccCCCCeEEEecCCC
Confidence 1223 44556688889999 89998764322 10 01 1222333333 6899 99999996
Q ss_pred H----HHHHHHHHcCCCcEEEechHHhhC
Q 025135 184 R----ELGIQALAEDGADLVAYGRLFISN 208 (257)
Q Consensus 184 ~----~~a~~~l~~g~~D~V~igR~~iad 208 (257)
. +.+..+++.| ++.|.+||.....
T Consensus 233 ~~~~~~~~~~a~~aG-a~Gv~vGRaI~q~ 260 (304)
T 1to3_A 233 EKLFPRAVRVAMEAG-ASGFLAGRAVWSS 260 (304)
T ss_dssp TTTHHHHHHHHHHTT-CCEEEESHHHHGG
T ss_pred HHHHHHHHHHHHHcC-CeEEEEehHHhCc
Confidence 5 4577888775 9999999999977
No 243
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=97.35 E-value=0.0003 Score=60.38 Aligned_cols=54 Identities=17% Similarity=0.260 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHh-CCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCch-HHHHHH
Q 025135 161 EAQLLRTWRRSY-QGTFICSGGF-TRELGIQALAEDGADLVAYGRLFISNPD-LVLRFK 216 (257)
Q Consensus 161 ~~~~~~~ir~~~-~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~iadP~-l~~k~~ 216 (257)
....++++++.+ ++||++.||| ++++++++++ | +|.|.+|.+++.+|+ ++++++
T Consensus 169 ~~~~i~~i~~~~~~~Pv~vGgGI~t~e~a~~~~~-g-Ad~VIVGSa~v~~~~~~~~~v~ 225 (240)
T 1viz_A 169 DIEAVKKTKAVLETSTLFYGGGIKDAETAKQYAE-H-ADVIVVGNAVYEDFDRALKTVA 225 (240)
T ss_dssp CHHHHHHHHHTCSSSEEEEESSCCSHHHHHHHHT-T-CSEEEECTHHHHCHHHHHTHHH
T ss_pred hHHHHHHHHHhcCCCCEEEEeccCCHHHHHHHHh-C-CCEEEEChHHHhCHHHHHHHHH
Confidence 356778899998 9999999999 8999999887 6 999999999999999 888764
No 244
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=97.34 E-value=0.0058 Score=53.25 Aligned_cols=126 Identities=13% Similarity=0.109 Sum_probs=83.1
Q ss_pred HHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCCCC
Q 025135 31 ALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDATDS 110 (257)
Q Consensus 31 A~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~ 110 (257)
...|..+|+|+|-|.++. |+ ..-+.++++..++ .|- .+.+-++
T Consensus 135 i~ea~~~GAD~VlLi~a~-------L~-----------------~~~l~~l~~~a~~-lGl-~~lvevh----------- 177 (272)
T 3tsm_A 135 VYEARSWGADCILIIMAS-------VD-----------------DDLAKELEDTAFA-LGM-DALIEVH----------- 177 (272)
T ss_dssp HHHHHHTTCSEEEEETTT-------SC-----------------HHHHHHHHHHHHH-TTC-EEEEEEC-----------
T ss_pred HHHHHHcCCCEEEEcccc-------cC-----------------HHHHHHHHHHHHH-cCC-eEEEEeC-----------
Confidence 445678999999987654 11 1235666666665 343 4555554
Q ss_pred CcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh--CCcEEEeCCC-CHHHH
Q 025135 111 DPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY--QGTFICSGGF-TRELG 187 (257)
Q Consensus 111 ~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~G~i-t~~~a 187 (257)
+.++. +...++| .++|-+..+...... .. ......+.+.+ ++|+|+-||| |++++
T Consensus 178 -~~eEl----~~A~~~g------a~iIGinnr~l~t~~--------~d---l~~~~~L~~~ip~~~~vIaesGI~t~edv 235 (272)
T 3tsm_A 178 -DEAEM----ERALKLS------SRLLGVNNRNLRSFE--------VN---LAVSERLAKMAPSDRLLVGESGIFTHEDC 235 (272)
T ss_dssp -SHHHH----HHHTTSC------CSEEEEECBCTTTCC--------BC---THHHHHHHHHSCTTSEEEEESSCCSHHHH
T ss_pred -CHHHH----HHHHhcC------CCEEEECCCCCccCC--------CC---hHHHHHHHHhCCCCCcEEEECCCCCHHHH
Confidence 23332 3344678 788877655433221 11 22334455665 4789999999 99999
Q ss_pred HHHHHcCCCcEEEechHHhhCchHHHHHH
Q 025135 188 IQALAEDGADLVAYGRLFISNPDLVLRFK 216 (257)
Q Consensus 188 ~~~l~~g~~D~V~igR~~iadP~l~~k~~ 216 (257)
.++.+.| +|.|.+|.+++..+|.-..++
T Consensus 236 ~~l~~~G-a~gvLVG~almr~~d~~~~~~ 263 (272)
T 3tsm_A 236 LRLEKSG-IGTFLIGESLMRQHDVAAATR 263 (272)
T ss_dssp HHHHTTT-CCEEEECHHHHTSSCHHHHHH
T ss_pred HHHHHcC-CCEEEEcHHHcCCcCHHHHHH
Confidence 9999887 999999999999888765554
No 245
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=97.26 E-value=0.0039 Score=51.80 Aligned_cols=121 Identities=19% Similarity=0.138 Sum_probs=74.0
Q ss_pred HHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCCC
Q 025135 30 AALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDATD 109 (257)
Q Consensus 30 AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~ 109 (257)
.++.+.++|+|.|-+|+-.| .+.++.+|+.. ++-+.+.....+...
T Consensus 70 ~v~~~~~~Gad~vtvh~~~g-----------------------------~~~i~~~~~~~-----gv~vl~~t~~~~~~~ 115 (208)
T 2czd_A 70 IARKVFGAGADYVIVHTFVG-----------------------------RDSVMAVKELG-----EIIMVVEMSHPGALE 115 (208)
T ss_dssp HHHHHHHTTCSEEEEESTTC-----------------------------HHHHHHHHTTS-----EEEEECCCCSGGGGT
T ss_pred HHHHHHhcCCCEEEEeccCC-----------------------------HHHHHHHHHhC-----CcEEEEecCCcchhh
Confidence 34455579999999997542 12266666543 343433211111000
Q ss_pred CCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCC-cEEEeCCCCHH--H
Q 025135 110 SDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQG-TFICSGGFTRE--L 186 (257)
Q Consensus 110 ~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~-pvi~~G~it~~--~ 186 (257)
.. .+....++++..+.| .+.+.+... .+ +.++.+|+..+. ++++.||++++ +
T Consensus 116 ~~-~~~v~~~~~~a~~~G------~~G~~~~~~---------------~~---~~i~~lr~~~~~~~~iv~gGI~~~g~~ 170 (208)
T 2czd_A 116 FI-NPLTDRFIEVANEIE------PFGVIAPGT---------------RP---ERIGYIRDRLKEGIKILAPGIGAQGGK 170 (208)
T ss_dssp TT-GGGHHHHHHHHHHHC------CSEEECCCS---------------ST---HHHHHHHHHSCTTCEEEECCCCSSTTH
T ss_pred HH-HHHHHHHHHHHHHhC------CcEEEECCC---------------Ch---HHHHHHHHhCCCCeEEEECCCCCCCCC
Confidence 00 233455677777888 666654321 11 233557777663 67788999766 7
Q ss_pred HHHHHHcCCCcEEEechHHhhCch
Q 025135 187 GIQALAEDGADLVAYGRLFISNPD 210 (257)
Q Consensus 187 a~~~l~~g~~D~V~igR~~iadP~ 210 (257)
+.++++.| +|.|.+||+.+..++
T Consensus 171 ~~~~~~aG-ad~vvvGr~I~~a~d 193 (208)
T 2czd_A 171 AKDAVKAG-ADYIIVGRAIYNAPN 193 (208)
T ss_dssp HHHHHHHT-CSEEEECHHHHTSSS
T ss_pred HHHHHHcC-CCEEEEChHHhcCCC
Confidence 88999887 999999999998555
No 246
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=97.26 E-value=0.0034 Score=52.43 Aligned_cols=47 Identities=13% Similarity=0.003 Sum_probs=37.9
Q ss_pred HHHHHHHHHh--CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCch
Q 025135 163 QLLRTWRRSY--QGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNPD 210 (257)
Q Consensus 163 ~~~~~ir~~~--~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP~ 210 (257)
..++.+|+.. +.||++.||++++.+.++++.| +|+|.+||+....+|
T Consensus 151 ~~i~~lr~~~~~~~~i~v~GGI~~~~~~~~~~aG-ad~ivvG~~I~~a~d 199 (216)
T 1q6o_A 151 ADITAIKRLSDMGFKVTVTGGLALEDLPLFKGIP-IHVFIAGRSIRDAAS 199 (216)
T ss_dssp HHHHHHHHHHHTTCEEEEESSCCGGGGGGGTTSC-CSEEEESHHHHTSSC
T ss_pred HHHHHHHHhcCCCCcEEEECCcChhhHHHHHHcC-CCEEEEeehhcCCCC
Confidence 3445566665 5679999999999999999887 999999999997544
No 247
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=97.24 E-value=0.0047 Score=54.21 Aligned_cols=109 Identities=22% Similarity=0.125 Sum_probs=74.8
Q ss_pred cCCcCCCCCCc--hhhHhhHH---HHHHHHHHHHhCCC-eEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCc
Q 025135 60 INDRTDEYGGS--IENRCRFL---MQLVREVIVAIGAD-RVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAK 133 (257)
Q Consensus 60 ~N~R~D~yGGs--~enR~r~~---~eiv~aiR~~vg~~-~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~ 133 (257)
.|+|.+-|..- ..|+..+. .+-++.+|+..++. +|++-.. +.+++. ...++|
T Consensus 159 ~nHR~~L~d~~LIkdnHi~~aggi~~av~~ar~~~~~~~~IgVev~------------t~eea~----eA~~aG------ 216 (286)
T 1x1o_A 159 RNHRYGLFDGILLKENHVRAAGGVGEAVRRAKARAPHYLKVEVEVR------------SLEELE----EALEAG------ 216 (286)
T ss_dssp BCCCSSSSSCEEECHHHHHHHTSHHHHHHHHHHHSCTTSCEEEEES------------SHHHHH----HHHHHT------
T ss_pred cccccccccceEEECCHHHHhCCHHHHHHHHHHhCCCCCEEEEEeC------------CHHHHH----HHHHcC------
Confidence 57888887764 45666654 66788899998876 6777332 344433 334578
Q ss_pred eeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh--CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCc
Q 025135 134 LTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY--QGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNP 209 (257)
Q Consensus 134 vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP 209 (257)
+|||-+... .+ ..++++.+.+ .+|+.++||||++.+.++.+.| +|+|++|....+-|
T Consensus 217 aD~I~ld~~---------------~~---~~~k~av~~v~~~ipi~AsGGIt~eni~~~a~tG-vD~IsVgs~~~~a~ 275 (286)
T 1x1o_A 217 ADLILLDNF---------------PL---EALREAVRRVGGRVPLEASGNMTLERAKAAAEAG-VDYVSVGALTHSAK 275 (286)
T ss_dssp CSEEEEESC---------------CH---HHHHHHHHHHTTSSCEEEESSCCHHHHHHHHHHT-CSEEECTHHHHSCC
T ss_pred CCEEEECCC---------------CH---HHHHHHHHHhCCCCeEEEEcCCCHHHHHHHHHcC-CCEEEEcHHHcCCC
Confidence 888876541 11 1223333334 5899999999999999999998 99999988655433
No 248
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=97.23 E-value=0.00043 Score=59.08 Aligned_cols=55 Identities=13% Similarity=0.184 Sum_probs=48.5
Q ss_pred HHHHHHHHHHh-CCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCchHHHHHHcC
Q 025135 162 AQLLRTWRRSY-QGTFICSGGF-TRELGIQALAEDGADLVAYGRLFISNPDLVLRFKLN 218 (257)
Q Consensus 162 ~~~~~~ir~~~-~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~g 218 (257)
.+.++.+|+.+ +.||++.||| ++++++++++ | +|.|.+|.+++.||+++.++.+.
T Consensus 174 ~~~v~~ir~~~~~~pv~vGfGI~~~e~a~~~~~-g-AD~VVVGSai~~~~~~~~e~v~~ 230 (235)
T 3w01_A 174 VSKVQAVSEHLTETQLFYGGGISSEQQATEMAA-I-ADTIIVGDIIYKDIKKALKTVKI 230 (235)
T ss_dssp HHHHHHHHTTCSSSEEEEESCCCSHHHHHHHHT-T-SSEEEECTHHHHCHHHHHHTTCC
T ss_pred HHHHHHHHHhcCCCCEEEECCcCCHHHHHHHHc-C-CCEEEECCceecCHHHHHHHHHH
Confidence 46778899988 8999999999 8999998876 5 99999999999999999887643
No 249
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=97.22 E-value=0.0036 Score=58.24 Aligned_cols=103 Identities=9% Similarity=0.081 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHh-------CCC-eEEEEEccCCCCC--CCC-----------CCCcHHHHHHHHHHHHh-cCCccCCcee
Q 025135 78 LMQLVREVIVAI-------GAD-RVGVRMSPAIDHL--DAT-----------DSDPLGLGLAVIQGLNK-LQIDQGAKLT 135 (257)
Q Consensus 78 ~~eiv~aiR~~v-------g~~-~v~vrls~~~~~~--~~~-----------~~~~~~~~~~l~~~L~~-~G~~~~~~vd 135 (257)
..+.|++||+++ |++ .|.+.....+.|. ++. ...+.++++++++.|.+ .+ +.
T Consensus 225 d~~~l~avreav~~agy~pG~dv~L~vDaaas~~~~~~n~~y~~~~n~~~~~~~~t~~eai~~~~~l~~~~~------i~ 298 (444)
T 1w6t_A 225 TEDGVETILAAIEAAGYVPGKDVFLGFDCASSEFYDKERKVYDYTKFEGEGAAVRTSAEQIDYLEELVNKYP------II 298 (444)
T ss_dssp HHHHHHHHHHHHHHTTCCBTTTBEEEEECCGGGGBC--CCCEETHHHHCTTCCEECHHHHHHHHHHHHHHSC------EE
T ss_pred HHHHHHHHHHHHHHhccCCCCCcEEEEEccchhcccccCCceeeccccCcccCCCCHHHHHHHHHHHHHhCC------cE
Confidence 457788888888 876 5666662222221 111 00356888999999875 88 88
Q ss_pred EEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh--CCcEEEeCC-C-CHHHHHHHHHcCCCcEEEec
Q 025135 136 YLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY--QGTFICSGG-F-TRELGIQALAEDGADLVAYG 202 (257)
Q Consensus 136 ~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~G~-i-t~~~a~~~l~~g~~D~V~ig 202 (257)
||+ +|- .+......+.+++.+ ++||++... + +++++.++++.+.+|+|.+=
T Consensus 299 ~iE--ePl--------------~~~d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~i~ik 353 (444)
T 1w6t_A 299 TIE--DGM--------------DENDWDGWKALTERLGKKVQLVGDDFFVTNTDYLARGIQEGAANSILIK 353 (444)
T ss_dssp EEE--SCS--------------CTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEEC
T ss_pred EEE--CCC--------------ChhhHHHHHHHHHhhCCCCeEEeCCcccCCHHHHHHHHHcCCCCEEEEc
Confidence 887 652 222345667788888 889988776 6 79999999999999999873
No 250
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=97.22 E-value=0.0099 Score=52.36 Aligned_cols=128 Identities=9% Similarity=0.002 Sum_probs=76.1
Q ss_pred HHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCC-C-eEEEEEccCCCCCCC
Q 025135 30 AALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGA-D-RVGVRMSPAIDHLDA 107 (257)
Q Consensus 30 AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~-~-~v~vrls~~~~~~~~ 107 (257)
.++.|.+.|+|+|.++.--| .+ ..+-.++-+.++++++.. . ++.+- .. .+.
T Consensus 130 ~ve~Av~~GAdaV~~~i~~G--------------s~--------~~~~~l~~i~~v~~~a~~~GlpvIie-~~----~G~ 182 (295)
T 3glc_A 130 SMDDAVRLNSCAVAAQVYIG--------------SE--------YEHQSIKNIIQLVDAGMKVGMPTMAV-TG----VGK 182 (295)
T ss_dssp CHHHHHHTTCSEEEEEECTT--------------ST--------THHHHHHHHHHHHHHHHTTTCCEEEE-EC----C--
T ss_pred HHHHHHHCCCCEEEEEEECC--------------CC--------cHHHHHHHHHHHHHHHHHcCCEEEEE-CC----CCC
Confidence 34556789999999874321 11 112233444455555432 2 54442 21 111
Q ss_pred CCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC--CH-
Q 025135 108 TDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF--TR- 184 (257)
Q Consensus 108 ~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i--t~- 184 (257)
....+.+.....++...++| .|||-+.-+ . ..++++.+..++||++.||+ +.
T Consensus 183 ~~~~d~e~i~~aariA~elG------AD~VKt~~t--------------~-----e~~~~vv~~~~vPVv~~GG~~~~~~ 237 (295)
T 3glc_A 183 DMVRDQRYFSLATRIAAEMG------AQIIKTYYV--------------E-----KGFERIVAGCPVPIVIAGGKKLPER 237 (295)
T ss_dssp --CCSHHHHHHHHHHHHHTT------CSEEEEECC--------------T-----TTHHHHHHTCSSCEEEECCSCCCHH
T ss_pred ccCCCHHHHHHHHHHHHHhC------CCEEEeCCC--------------H-----HHHHHHHHhCCCcEEEEECCCCCHH
Confidence 00123344455788888999 899886421 0 11355677778999999998 33
Q ss_pred ---HHHHHHHHcCCCcEEEechHHhhCch
Q 025135 185 ---ELGIQALAEDGADLVAYGRLFISNPD 210 (257)
Q Consensus 185 ---~~a~~~l~~g~~D~V~igR~~iadP~ 210 (257)
+.+.++++.| ++.|.+||.....|+
T Consensus 238 ~~l~~v~~ai~aG-A~Gv~vGRnI~q~~d 265 (295)
T 3glc_A 238 EALEMCWQAIDQG-ASGVDMGRNIFQSDH 265 (295)
T ss_dssp HHHHHHHHHHHTT-CSEEEESHHHHTSSS
T ss_pred HHHHHHHHHHHhC-CeEEEeHHHHhcCcC
Confidence 3456777876 999999999997554
No 251
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=97.19 E-value=0.0033 Score=58.29 Aligned_cols=103 Identities=7% Similarity=0.055 Sum_probs=72.2
Q ss_pred HHHHHHHHHHH---hCCC-eEEEEEccCCCCCCC-----CCCCcHHHHHHHHHH-HHhcCCccCCceeEEEeeCCCcccC
Q 025135 78 LMQLVREVIVA---IGAD-RVGVRMSPAIDHLDA-----TDSDPLGLGLAVIQG-LNKLQIDQGAKLTYLHVTQPRYTAY 147 (257)
Q Consensus 78 ~~eiv~aiR~~---vg~~-~v~vrls~~~~~~~~-----~~~~~~~~~~~l~~~-L~~~G~~~~~~vd~i~v~~~~~~~~ 147 (257)
+.-++++||++ +|++ .|.+.....+.|.++ ....+.++++++++. |++.+ +.||+ +|-
T Consensus 221 l~~i~~Air~agy~~G~dv~l~vD~aase~~~~g~Y~l~~~~~t~~eai~~~~~ll~~y~------i~~IE--dPl---- 288 (428)
T 3tqp_A 221 FELILEAIEDANYVPGKDIYLALDAASSELYQNGRYDFENNQLTSEEMIDRLTEWTKKYP------VISIE--DGL---- 288 (428)
T ss_dssp HHHHHHHHHHTTCCBTTTBEEEEECCGGGSEETTEECCSSSCBCHHHHHHHHHHHHHHSC------EEEEE--CCS----
T ss_pred HHHHHHHHHHhhcccCCceEEEEecchhhhccCCceeccccccCHHHHHHHHHHHHhhcc------cceEe--CCC----
Confidence 44458999999 9987 577777543333221 012467888899987 88888 88887 551
Q ss_pred CCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCC--C--CHHHHHHHHHcCCCcEEEec
Q 025135 148 GQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGG--F--TRELGIQALAEDGADLVAYG 202 (257)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~--i--t~~~a~~~l~~g~~D~V~ig 202 (257)
.+..+...+.+++.++.||-++|. + +++++.++|+.+.||.|.+=
T Consensus 289 ----------~~dD~eg~~~L~~~~~~pI~ivGDel~vt~~~~~~~~i~~~a~d~i~iK 337 (428)
T 3tqp_A 289 ----------SENDWAGWKLLTERLENKVQLVGDDIFVTNPDILEKGIKKNIANAILVK 337 (428)
T ss_dssp ----------CTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEEC
T ss_pred ----------CcccHHHHHHHHHhcCCCcceeccccccCCHHHHHHHHHhCCCCEEEec
Confidence 222345667789998877644443 3 69999999999999999764
No 252
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=97.17 E-value=0.0036 Score=54.47 Aligned_cols=43 Identities=21% Similarity=0.182 Sum_probs=37.5
Q ss_pred HHHHHHHHHhCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhC
Q 025135 163 QLLRTWRRSYQGTFICSGGF-TRELGIQALAEDGADLVAYGRLFISN 208 (257)
Q Consensus 163 ~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~iad 208 (257)
..++.+|+..++||++.||| |++++.++ .+ +|.|.+|.++...
T Consensus 192 ~~v~~vr~~~~~Pv~vGfGI~t~e~a~~~--~~-ADgVIVGSAi~~~ 235 (271)
T 1ujp_A 192 DLVRRIKARTALPVAVGFGVSGKATAAQA--AV-ADGVVVGSALVRA 235 (271)
T ss_dssp HHHHHHHTTCCSCEEEESCCCSHHHHHHH--TT-SSEEEECHHHHHH
T ss_pred HHHHHHHhhcCCCEEEEcCCCCHHHHHHh--cC-CCEEEEChHHhcc
Confidence 56778898889999999999 79999996 55 9999999998864
No 253
>1jpd_X L-Ala-D/L-Glu epimerase; enolase superfamily, muconate lactonizing enzyme subgroup, alpha/beta barrel, structural genomics, isomerase; 2.60A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1
Probab=97.17 E-value=0.00052 Score=61.13 Aligned_cols=114 Identities=18% Similarity=0.103 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCC
Q 025135 25 DQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAID 103 (257)
Q Consensus 25 ~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~ 103 (257)
+.+++.|+.+.+.||..+.|+.|. + ...+.+++||+++ ++ .|.+..+. .
T Consensus 134 e~~~~~a~~~~~~G~~~~KiKvg~----------------~-----------~d~~~v~avr~~~-~~~~l~vDaN~--~ 183 (324)
T 1jpd_X 134 DQMANSASTLWQAGAKLLKVKLDN----------------H-----------LISERMVAIRTAV-PDATLIVDANE--S 183 (324)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCS----------------S-----------CHHHHHHHHHHHC-TTSEEEEECTT--C
T ss_pred HHHHHHHHHHHHcCCCEEEEEeCC----------------c-----------hHHHHHHHHHHhC-CCCEEEEECcC--C
Confidence 445567777788999999998552 0 1356789999998 44 45444442 2
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-
Q 025135 104 HLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF- 182 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i- 182 (257)
| +.+++.++++.|++.+ +.||+ +|-... ....++.++ .++||++...+
T Consensus 184 ~-------~~~~a~~~~~~l~~~~------i~~iE--qP~~~~--------------d~~~~~~l~--~~ipIa~dE~~~ 232 (324)
T 1jpd_X 184 W-------RAEGLAARCQLLADLG------VAMLE--QPLPAQ--------------DDAALENFI--HPLPICADESCH 232 (324)
T ss_dssp C-------CSTTHHHHHHHHHHTT------CCEEE--CCSCTT--------------SCGGGGSSC--CSSCEEESTTCS
T ss_pred C-------CHHHHHHHHHHHHhCC------CCEEE--CCCCCC--------------CHHHHHhcc--CCCCEEEcCCCC
Confidence 2 3456788999999998 88887 652210 001111122 46788877777
Q ss_pred CHHHHHHHHHcCCCcEEEe
Q 025135 183 TRELGIQALAEDGADLVAY 201 (257)
Q Consensus 183 t~~~a~~~l~~g~~D~V~i 201 (257)
+++++.++++. +|+|.+
T Consensus 233 ~~~~~~~~~~~--~~~i~i 249 (324)
T 1jpd_X 233 TRSNLKALKGR--YEMVNI 249 (324)
T ss_dssp SGGGHHHHBTT--BSEEEE
T ss_pred CHHHHHHHHhh--CCEEEE
Confidence 78888888754 787766
No 254
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=97.12 E-value=0.0015 Score=55.46 Aligned_cols=121 Identities=13% Similarity=0.091 Sum_probs=81.0
Q ss_pred hhHHHHHHHH------------HHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHH
Q 025135 18 SEIPEVIDQY------------RQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREV 85 (257)
Q Consensus 18 ~eI~~ii~~f------------~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~ai 85 (257)
+-|+++.+.| ...+..|.++|.|+| |.++ ++ .+++++.
T Consensus 66 ~~i~~l~~~~~~~~igagtvl~~d~~~~A~~aGAd~v--~~p~-----------~d-----------------~~v~~~~ 115 (225)
T 1mxs_A 66 KAIQVLREQRPELCVGAGTVLDRSMFAAVEAAGAQFV--VTPG-----------IT-----------------EDILEAG 115 (225)
T ss_dssp HHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSSE--ECSS-----------CC-----------------HHHHHHH
T ss_pred HHHHHHHHhCcccEEeeCeEeeHHHHHHHHHCCCCEE--EeCC-----------CC-----------------HHHHHHH
Confidence 3466677777 578889999999999 3332 11 2556665
Q ss_pred HHHhCCCe-EEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchh-HHH
Q 025135 86 IVAIGADR-VGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDE-EAQ 163 (257)
Q Consensus 86 R~~vg~~~-v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~-~~~ 163 (257)
++ .|.+. +++ . +..+ + ....+.| +||+-+. | .... -..
T Consensus 116 ~~-~g~~~i~G~--~------------t~~e---~-~~A~~~G------ad~vk~F-P--------------a~~~~G~~ 155 (225)
T 1mxs_A 116 VD-SEIPLLPGI--S------------TPSE---I-MMGYALG------YRRFKLF-P--------------AEISGGVA 155 (225)
T ss_dssp HH-CSSCEECEE--C------------SHHH---H-HHHHTTT------CCEEEET-T--------------HHHHTHHH
T ss_pred HH-hCCCEEEee--C------------CHHH---H-HHHHHCC------CCEEEEc-c--------------CccccCHH
Confidence 54 66542 241 1 2333 2 3355789 8999872 1 0111 245
Q ss_pred HHHHHHHHh-CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCc
Q 025135 164 LLRTWRRSY-QGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNP 209 (257)
Q Consensus 164 ~~~~ir~~~-~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP 209 (257)
.++.++..+ ++|++..|||+++.+.++++.+++|.|+ |+.++..+
T Consensus 156 ~lk~i~~~~~~ipvvaiGGI~~~N~~~~l~~~Ga~~v~-gSai~~~~ 201 (225)
T 1mxs_A 156 AIKAFGGPFGDIRFCPTGGVNPANVRNYMALPNVMCVG-TTWMLDSS 201 (225)
T ss_dssp HHHHHHTTTTTCEEEEBSSCCTTTHHHHHHSTTBCCEE-ECTTSCHH
T ss_pred HHHHHHhhCCCCeEEEECCCCHHHHHHHHhccCCEEEE-EchhcCch
Confidence 677888888 7999999999999999999955599999 88887533
No 255
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=97.07 E-value=0.0042 Score=52.38 Aligned_cols=123 Identities=11% Similarity=-0.008 Sum_probs=74.8
Q ss_pred HHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCC--CeEEEEEccCCCCCCCCCCC
Q 025135 34 AIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGA--DRVGVRMSPAIDHLDATDSD 111 (257)
Q Consensus 34 a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~--~~v~vrls~~~~~~~~~~~~ 111 (257)
+.++|+|.|-+|+..| ..-+.+.++++++. |. ..++|-+... .
T Consensus 78 ~~~~Gad~vtVH~~~g-------------------------~~~l~~a~~~~~~~-g~~~~~~~Vt~lts---------~ 122 (221)
T 3exr_A 78 NAVRGADWMTCICSAT-------------------------IPTMKAARKAIEDI-NPDKGEIQVELYGD---------W 122 (221)
T ss_dssp HHTTTCSEEEEETTSC-------------------------HHHHHHHHHHHHHH-CTTTCEEEEECCSS---------C
T ss_pred HHHcCCCEEEEeccCC-------------------------HHHHHHHHHHHHhc-CCCcceEEEEEcCC---------C
Confidence 5679999999998652 12355566666654 42 2477777642 2
Q ss_pred cHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh--CCcEEEeCCCCHHHHHH
Q 025135 112 PLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY--QGTFICSGGFTRELGIQ 189 (257)
Q Consensus 112 ~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~G~it~~~a~~ 189 (257)
+.+.. +.+.+.+ ++++-++-....+. .+ ....+ ..++.+|+.. +.+|.+.||++++++.+
T Consensus 123 ~~~~~----~~~~~~~------~~~~v~~~a~~~~~----~G-vv~s~---~e~~~ir~~~~~~~~i~v~gGI~~~~~~~ 184 (221)
T 3exr_A 123 TYDQA----QQWLDAG------ISQAIYHQSRDALL----AG-ETWGE---KDLNKVKKLIEMGFRVSVTGGLSVDTLKL 184 (221)
T ss_dssp CHHHH----HHHHHTT------CCEEEEECCHHHHH----HT-CCCCH---HHHHHHHHHHHHTCEEEEESSCCGGGGGG
T ss_pred CHHHH----HHHHcCC------HHHHHHHHHHhcCC----Cc-cccCH---HHHHHHHHhhcCCceEEEECCCCHHHHHH
Confidence 34332 2445566 66655542211110 01 11112 2345566654 46688899999998888
Q ss_pred HHHcCCCcEEEechHHhhCch
Q 025135 190 ALAEDGADLVAYGRLFISNPD 210 (257)
Q Consensus 190 ~l~~g~~D~V~igR~~iadP~ 210 (257)
+++.| +|++.+||+....+|
T Consensus 185 ~~~aG-ad~~VvG~~I~~a~d 204 (221)
T 3exr_A 185 FEGVD-VFTFIAGRGITEAKN 204 (221)
T ss_dssp GTTCC-CSEEEECHHHHTSSS
T ss_pred HHHCC-CCEEEECchhhCCCC
Confidence 88887 999999999986444
No 256
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=97.01 E-value=0.0047 Score=53.99 Aligned_cols=126 Identities=10% Similarity=0.094 Sum_probs=79.5
Q ss_pred HHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhh---HHHHHHHHHHHHhCCCeEEEEEccCCCC
Q 025135 28 RQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCR---FLMQLVREVIVAIGADRVGVRMSPAIDH 104 (257)
Q Consensus 28 ~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r---~~~eiv~aiR~~vg~~~v~vrls~~~~~ 104 (257)
+.-++.|.+.|+|.|++..--|+|.+ ++.. .+.+-|.+|+++++..+ +|+=....+
T Consensus 109 v~E~~~Av~~GAdEIDmVinig~lks-------------------g~~~~~~~v~~eI~~v~~a~~~~~--lKVIlEt~~ 167 (281)
T 2a4a_A 109 LNDTEKALDDGADEIDLVINYKKIIE-------------------NTDEGLKEATKLTQSVKKLLTNKI--LKVIIEVGE 167 (281)
T ss_dssp HHHHHHHHHHTCSEEEEECCHHHHHH-------------------SHHHHHHHHHHHHHHHHTTCTTSE--EEEECCHHH
T ss_pred HHHHHHHHHcCCCEEEEecchHhhhC-------------------CChhHHHHHHHHHHHHHHHhcCCc--eEEEEeccc
Confidence 35567788899999999877666644 2233 78888999999997533 333321111
Q ss_pred CCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHH-HHH--------HhCCc
Q 025135 105 LDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRT-WRR--------SYQGT 175 (257)
Q Consensus 105 ~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-ir~--------~~~~p 175 (257)
. .+.+.....++...++| .|||-.+.+ +...+ ........+++ +++ ..+++
T Consensus 168 L-----~d~e~i~~A~~ia~eaG------ADfVKTSTG-f~~~g--------AT~edv~lm~~~v~~~~~~~~~tg~~vg 227 (281)
T 2a4a_A 168 L-----KTEDLIIKTTLAVLNGN------ADFIKTSTG-KVQIN--------ATPSSVEYIIKAIKEYIKNNPEKNNKIG 227 (281)
T ss_dssp H-----CSHHHHHHHHHHHHTTT------CSEEECCCS-CSSCC--------CCHHHHHHHHHHHHHHHHHCGGGTTCCE
T ss_pred C-----CcHHHHHHHHHHHHHhC------CCEEEeCCC-CCCCC--------CCHHHHHHHHHHHHHhhcccccCCCCce
Confidence 1 12333456788888999 999987643 21111 11222233332 322 22578
Q ss_pred EEEeCCC-CHHHHHHHHHcC
Q 025135 176 FICSGGF-TRELGIQALAED 194 (257)
Q Consensus 176 vi~~G~i-t~~~a~~~l~~g 194 (257)
|-++||+ |.++|.++|+.|
T Consensus 228 VKaaGGIrt~e~al~~i~ag 247 (281)
T 2a4a_A 228 LKVSGGISDLNTASHYILLA 247 (281)
T ss_dssp EEEESSCCSHHHHHHHHHHH
T ss_pred EEEeCCCCCHHHHHHHHHHh
Confidence 9999999 999999999886
No 257
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=97.01 E-value=0.0026 Score=55.15 Aligned_cols=128 Identities=19% Similarity=0.109 Sum_probs=78.9
Q ss_pred HHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCC
Q 025135 28 RQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDA 107 (257)
Q Consensus 28 ~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~ 107 (257)
+.-++.|.+.|+|.|++..--|.|.+ .+...+.+-|++|+++++...+.+|+=....+.
T Consensus 88 v~E~~~Av~~GAdEIDmVinig~l~~-------------------g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L-- 146 (260)
T 1p1x_A 88 LAETRAAIAYGADEVDVVFPYRALMA-------------------GNEQVGFDLVKACKEACAAANVLLKVIIETGEL-- 146 (260)
T ss_dssp HHHHHHHHHHTCSEEEEECCHHHHHT-------------------TCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHH--
T ss_pred HHHHHHHHHcCCCEEEEeccHHhhhC-------------------CCHHHHHHHHHHHHHHhcccCCeEEEEEecccC--
Confidence 35567888999999999877666543 123567888899999886321233333211111
Q ss_pred CCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHH-HHHHH---hCCcEEEeCCC-
Q 025135 108 TDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLR-TWRRS---YQGTFICSGGF- 182 (257)
Q Consensus 108 ~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ir~~---~~~pvi~~G~i- 182 (257)
.+.+.....++...++| .|||-.+.+ |...+ ........++ .|++. -+++|-++||+
T Consensus 147 ---~d~e~i~~a~~ia~eaG------ADfVKTSTG-f~~~g--------At~e~v~lm~~~I~~~~~g~~v~VKaaGGIr 208 (260)
T 1p1x_A 147 ---KDEALIRKASEISIKAG------ADFIKTSTG-KVAVN--------ATPESARIMMEVIRDMGVEKTVGFKPAGGVR 208 (260)
T ss_dssp ---CSHHHHHHHHHHHHHTT------CSEEECCCS-CSSCC--------CCHHHHHHHHHHHHHHTCTTTCEEECBSSCC
T ss_pred ---CcHHHHHHHHHHHHHhC------CCEEEeCCC-CCCCC--------CCHHHHHHHHHHHHHhcCCCCceEEEeCCCC
Confidence 12333457788888999 999987643 21111 1122222222 23321 24679999999
Q ss_pred CHHHHHHHHHcC
Q 025135 183 TRELGIQALAED 194 (257)
Q Consensus 183 t~~~a~~~l~~g 194 (257)
|.+++.++|+.|
T Consensus 209 t~~~al~~i~ag 220 (260)
T 1p1x_A 209 TAEDAQKYLAIA 220 (260)
T ss_dssp SHHHHHHHHHHH
T ss_pred CHHHHHHHHHhh
Confidence 899999999886
No 258
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=96.98 E-value=0.004 Score=57.50 Aligned_cols=103 Identities=9% Similarity=0.033 Sum_probs=70.3
Q ss_pred HHHHHH-HHHHHHhC--CC-eEEEEEccCCCCCCCCC-----CCcHHHHHHHHHH-HHhcCCccCCceeEEEeeCCCccc
Q 025135 77 FLMQLV-REVIVAIG--AD-RVGVRMSPAIDHLDATD-----SDPLGLGLAVIQG-LNKLQIDQGAKLTYLHVTQPRYTA 146 (257)
Q Consensus 77 ~~~eiv-~aiR~~vg--~~-~v~vrls~~~~~~~~~~-----~~~~~~~~~l~~~-L~~~G~~~~~~vd~i~v~~~~~~~ 146 (257)
-.++.| ++||++ | ++ .|++..+..+.|.++.. ..+.+++.++.+. +++.+ +.||+ +|-
T Consensus 219 e~l~~i~~Air~a-Gy~~dv~l~vD~~ase~~~~g~y~l~~~~~t~~eai~~~~~ll~~y~------i~~IE--dPl--- 286 (417)
T 3qn3_A 219 EPIDLLMTCIKKA-GYENRVKIALDVASTEFFKDGKYHMEGKAFSSEALIERYVELCAKYP------ICSIE--DGL--- 286 (417)
T ss_dssp HHHHHHHHHHHHT-TCTTTEEEEEECCGGGGEETTEEEETTEEECHHHHHHHHHHHHHHSC------EEEEE--SSS---
T ss_pred HHHHHHHHHHHHc-CCCCCceEEEECCchhhccCCeeecCCCccCHHHHHHHHHHHHhhcc------eeEEe--cCC---
Confidence 356666 899988 7 55 46776665433332210 1246778888886 78888 88886 552
Q ss_pred CCCcCCCCCCCchhHHHHHHHHHHHh--CCcEEEeCCC-C-HHHHHHHHHcCCCcEEEec
Q 025135 147 YGQTESGRPGTEDEEAQLLRTWRRSY--QGTFICSGGF-T-RELGIQALAEDGADLVAYG 202 (257)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~G~i-t-~~~a~~~l~~g~~D~V~ig 202 (257)
.+..+...+.+++.+ ++||++...+ | ++++.++|+.+.||.|.+=
T Consensus 287 -----------~~dD~e~~~~L~~~~g~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~iK 335 (417)
T 3qn3_A 287 -----------AENDFEGWIKLTEKLGNKIQLVGDDLFVTNEDILREGIIKKMANAVLIK 335 (417)
T ss_dssp -----------CTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEEC
T ss_pred -----------CcccHHHHHHHHHhhCCCCceecCCcccCCHHHHHHHHHhCCCCEEEec
Confidence 122345667788888 4787765555 6 9999999999999999764
No 259
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=96.94 E-value=0.0093 Score=52.57 Aligned_cols=109 Identities=17% Similarity=0.063 Sum_probs=74.8
Q ss_pred cCCcCCCCCCch--hhHhhH---HHHHHHHHHHHhCCCeEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCce
Q 025135 60 INDRTDEYGGSI--ENRCRF---LMQLVREVIVAIGADRVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKL 134 (257)
Q Consensus 60 ~N~R~D~yGGs~--enR~r~---~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~v 134 (257)
.|+|...+.+-+ +|...+ +.+-++++|+..+..+|.+-.. +.++.. ...++| +
T Consensus 172 ~~hr~~l~d~vlikdnhi~~~Gti~~ai~~~r~~~~~~kI~vev~------------tlee~~----eA~~aG------a 229 (296)
T 1qap_A 172 ANHRLGLTDAFLIKENHIIASGSVRQAVEKAFWLHPDVPVEVEVE------------NLDELD----DALKAG------A 229 (296)
T ss_dssp BCCCSSSSSCEEECHHHHHHHSSHHHHHHHHHHHSTTSCEEEEES------------SHHHHH----HHHHTT------C
T ss_pred hhhccccccEEEEEcCCeeccCCHHHHHHHHHHhCCCCcEEEEeC------------CHHHHH----HHHHcC------C
Confidence 578888888754 456666 6788899998887535555432 344332 234678 8
Q ss_pred eEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh--CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCc
Q 025135 135 TYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY--QGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNP 209 (257)
Q Consensus 135 d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP 209 (257)
|+|-+... . ...++.+++.+ .++|.++||||++.+.++.+.| +|++++|.....-|
T Consensus 230 D~I~ld~~---------------~---~e~l~~~v~~~~~~~~I~ASGGIt~~~i~~~a~~G-vD~isvGsli~~a~ 287 (296)
T 1qap_A 230 DIIMLDNF---------------N---TDQMREAVKRVNGQARLEVSGNVTAETLREFAETG-VDFISVGALTKHVR 287 (296)
T ss_dssp SEEEESSC---------------C---HHHHHHHHHTTCTTCCEEECCCSCHHHHHHHHHTT-CSEEECSHHHHEEE
T ss_pred CEEEECCC---------------C---HHHHHHHHHHhCCCCeEEEECCCCHHHHHHHHHcC-CCEEEEeHHHcCCC
Confidence 99877531 1 12334444555 4789999999999999999998 89999998544333
No 260
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=96.93 E-value=0.0093 Score=55.97 Aligned_cols=130 Identities=18% Similarity=0.143 Sum_probs=76.9
Q ss_pred HHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCC
Q 025135 29 QAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDAT 108 (257)
Q Consensus 29 ~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~ 108 (257)
+.+....++|.|.+-+..++|+. .-.++.++.+++.++ -++.++=-.
T Consensus 231 ~~a~~l~~~gvd~lvvdta~G~~------------------------~~~L~~I~~l~~~~~-vpvi~k~v~-------- 277 (486)
T 2cu0_A 231 KRAIELDKAGVDVIVVDTAHAHN------------------------LKAIKSMKEMRQKVD-ADFIVGNIA-------- 277 (486)
T ss_dssp HHHHHHHHTTCSEEEEECSCCCC------------------------HHHHHHHHHHHHTCC-SEEEEEEEC--------
T ss_pred HHHHHHHHhcCCceEEEecCCcE------------------------eehhhHHHHHHHHhC-CccccCCcC--------
Confidence 45666778999998777655321 124556777888773 366543211
Q ss_pred CCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccC-CCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHH
Q 025135 109 DSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAY-GQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TREL 186 (257)
Q Consensus 109 ~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~ 186 (257)
+.+. ++.|. | ++.+.+..+.-... .....+.-.+.......+..+.+.+++|||+.||+ +..+
T Consensus 278 ---~~~~----a~~l~--G------~d~v~vg~g~g~~~~~r~~~~~g~~~~~~l~~~~~~~~~~~vpVia~GGi~~~~d 342 (486)
T 2cu0_A 278 ---NPKA----VDDLT--F------ADAVKVGIGPGSICTTRIVAGVGVPQITAVAMVADRAQEYGLYVIADGGIRYSGD 342 (486)
T ss_dssp ---CHHH----HTTCT--T------SSEEEECSSCSTTBCHHHHTCCCCCHHHHHHHHHHHHHHHTCEEEEESCCCSHHH
T ss_pred ---CHHH----HHHhh--C------CCeEEEeeeeccceeeeEEeecCcchHHHHHHHHHHHHHcCCcEEecCCCCCHHH
Confidence 2232 33344 7 77777621100000 00000000011122234455666678999999999 8999
Q ss_pred HHHHHHcCCCcEEEechHHhh
Q 025135 187 GIQALAEDGADLVAYGRLFIS 207 (257)
Q Consensus 187 a~~~l~~g~~D~V~igR~~ia 207 (257)
+.++|.-| +|+|++|++|+.
T Consensus 343 i~kalalG-A~~v~~g~~~~~ 362 (486)
T 2cu0_A 343 IVKAIAAG-ADAVMLGNLLAG 362 (486)
T ss_dssp HHHHHHTT-CSEEEESTTTTT
T ss_pred HHHHHHcC-CCceeeChhhhc
Confidence 99999977 999999999985
No 261
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=96.91 E-value=0.0022 Score=61.31 Aligned_cols=90 Identities=11% Similarity=0.062 Sum_probs=66.6
Q ss_pred HHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CH---------
Q 025135 115 LGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TR--------- 184 (257)
Q Consensus 115 ~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~--------- 184 (257)
+-.++|+.+++.| ++.+|+.+-.-. .++ ..........++.+++.+.+||++.||+ +.
T Consensus 281 dp~~~A~~~~~~G------a~~l~~~dl~~~-----~~~-~~~~~~~~~~i~~i~~~~~ipi~vgGGIr~~~d~~~~~~~ 348 (555)
T 1jvn_A 281 KPVQLAQKYYQQG------ADEVTFLNITSF-----RDC-PLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIP 348 (555)
T ss_dssp HHHHHHHHHHHTT------CSEEEEEEEC--------CC-CGGGCHHHHHHHHHTTTCCSCEEEESSCSCEECTTCCEEC
T ss_pred CHHHHHHHHHHcC------CCEEEEEeCCcc-----ccc-cCCCchHHHHHHHHHhhCCCcEEEeCccccchhcccccch
Confidence 5577999999999 777776542110 000 0012234567777888889999999999 66
Q ss_pred --HHHHHHHHcCCCcEEEechHHhh-------------CchHHHHHHc
Q 025135 185 --ELGIQALAEDGADLVAYGRLFIS-------------NPDLVLRFKL 217 (257)
Q Consensus 185 --~~a~~~l~~g~~D~V~igR~~ia-------------dP~l~~k~~~ 217 (257)
++++++++.| +|.|.+|...+. +|++++++.+
T Consensus 349 ~~~~a~~~l~aG-ad~V~igt~~~~~~~~~~~~~~~~~~~~~i~~~~~ 395 (555)
T 1jvn_A 349 ALEVASLYFRSG-ADKVSIGTDAVYAAEKYYELGNRGDGTSPIETISK 395 (555)
T ss_dssp HHHHHHHHHHHT-CSEEEECHHHHHHHHHHHHTTSCCCSCSHHHHHHH
T ss_pred HHHHHHHHHHcC-CCEEEECCHHhhCchhhccccccccCHHHHHHHHH
Confidence 5699999998 999999999988 4799999876
No 262
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=96.90 E-value=0.011 Score=50.39 Aligned_cols=136 Identities=10% Similarity=0.092 Sum_probs=79.6
Q ss_pred HHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCe--EEEEEccCCCC--
Q 025135 29 QAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADR--VGVRMSPAIDH-- 104 (257)
Q Consensus 29 ~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~--v~vrls~~~~~-- 104 (257)
+.++...++|+|-|-|+..- -++..|+.|+ -+..|... +++-.....++
T Consensus 88 e~~~~~l~~GadkVii~t~a-----------------------~~~p~li~e~----~~~~g~q~iv~~iD~~~~~~~~v 140 (243)
T 4gj1_A 88 EEVKALLDCGVKRVVIGSMA-----------------------IKDATLCLEI----LKEFGSEAIVLALDTILKEDYVV 140 (243)
T ss_dssp HHHHHHHHTTCSEEEECTTT-----------------------TTCHHHHHHH----HHHHCTTTEEEEEEEEESSSEEE
T ss_pred HHHHHHHHcCCCEEEEcccc-----------------------ccCCchHHHH----HhcccCceEEEEEEEEeCCCCEE
Confidence 56778888999999887543 1224454444 44567663 34433111111
Q ss_pred -CCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh-CCcEEEeCCC
Q 025135 105 -LDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY-QGTFICSGGF 182 (257)
Q Consensus 105 -~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~G~i 182 (257)
.+++...+.....++++.+++.| +.-+-++.-..++.. .....+.++.+++.+ ++|||++||+
T Consensus 141 ~~~gw~~~~~~~~~~~~~~~~~~g------~~eil~t~Id~DGt~---------~G~d~~l~~~l~~~~~~ipviasGGv 205 (243)
T 4gj1_A 141 AVNAWQEASDKKLMEVLDFYSNKG------LKHILCTDISKDGTM---------QGVNVRLYKLIHEIFPNICIQASGGV 205 (243)
T ss_dssp C--------CCBHHHHHHHHHTTT------CCEEEEEETTC--------------CCCHHHHHHHHHHCTTSEEEEESCC
T ss_pred EecCceecccchHHHHHHHHhhcC------CcEEEeeeecccccc---------cCCCHHHHHHHHHhcCCCCEEEEcCC
Confidence 11111111122456788899998 555544432111110 112346778888887 5899999999
Q ss_pred -CHHHHHHHHHcCCCcEEEechHHhhC
Q 025135 183 -TRELGIQALAEDGADLVAYGRLFISN 208 (257)
Q Consensus 183 -t~~~a~~~l~~g~~D~V~igR~~iad 208 (257)
+.++.+++ +.+ ++.|.+|++|...
T Consensus 206 ~~~~Dl~~l-~~~-~~gvivg~Al~~g 230 (243)
T 4gj1_A 206 ASLKDLENL-KGI-CSGVIVGKALLDG 230 (243)
T ss_dssp CSHHHHHHT-TTT-CSEEEECHHHHTT
T ss_pred CCHHHHHHH-Hcc-CchhehHHHHHCC
Confidence 89998775 554 9999999998754
No 263
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=96.86 E-value=0.0046 Score=50.96 Aligned_cols=55 Identities=24% Similarity=0.167 Sum_probs=47.3
Q ss_pred HHHHHHHHHHhCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCchHHHHHHc
Q 025135 162 AQLLRTWRRSYQGTFICSGGF-TRELGIQALAEDGADLVAYGRLFISNPDLVLRFKL 217 (257)
Q Consensus 162 ~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~ 217 (257)
...+..+++..++|+|++|++ ++++..++++.| +|.|++|+++...|+-+.++++
T Consensus 163 ~~~i~~~~~~~~~Pvia~~g~~~~~~~~~~~~~G-~~~~~vg~a~~~~~~~~~~~~~ 218 (237)
T 3cwo_X 163 TEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAG-ADAALAASVFHFREIDVRELKE 218 (237)
T ss_dssp HHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHHT-CSEEEESHHHHTTSSCHHHHHH
T ss_pred HHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcC-cHHHhhhHHHHcCCCCHHHHHH
Confidence 456677888889999999999 799999999876 9999999999999977776653
No 264
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=96.84 E-value=0.0071 Score=52.07 Aligned_cols=123 Identities=10% Similarity=0.076 Sum_probs=81.9
Q ss_pred HHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCCCCCc
Q 025135 33 NAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDATDSDP 112 (257)
Q Consensus 33 ~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~~~ 112 (257)
.++.+|.|+|=|.++. |+ + .-+.++++.+++ .|- .+.+-++ +
T Consensus 118 ea~~~GAD~ilLi~a~-------l~----------------~-~~l~~l~~~a~~-lGl-~~lvEv~------------~ 159 (251)
T 1i4n_A 118 LASSVGADAILIIARI-------LT----------------A-EQIKEIYEAAEE-LGM-DSLVEVH------------S 159 (251)
T ss_dssp HHHHTTCSEEEEEGGG-------SC----------------H-HHHHHHHHHHHT-TTC-EEEEEEC------------S
T ss_pred HHHHcCCCEEEEeccc-------CC----------------H-HHHHHHHHHHHH-cCC-eEEEEeC------------C
Confidence 3889999999998774 11 1 236677777776 343 4666665 2
Q ss_pred HHHHHHHHHHHHhc-CCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh--CCcEEEeCCC-CHHHHH
Q 025135 113 LGLGLAVIQGLNKL-QIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY--QGTFICSGGF-TRELGI 188 (257)
Q Consensus 113 ~~~~~~l~~~L~~~-G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~G~i-t~~~a~ 188 (257)
.++ ++...++ | .++|-++.+.+.... .. ......+.+.+ ++++|+-||| |++++.
T Consensus 160 ~eE----~~~A~~l~g------~~iIGinnr~l~t~~--------~d---~~~~~~l~~~ip~~~~vIaEsGI~t~edv~ 218 (251)
T 1i4n_A 160 RED----LEKVFSVIR------PKIIGINTRDLDTFE--------IK---KNVLWELLPLVPDDTVVVAESGIKDPRELK 218 (251)
T ss_dssp HHH----HHHHHTTCC------CSEEEEECBCTTTCC--------BC---TTHHHHHGGGSCTTSEEEEESCCCCGGGHH
T ss_pred HHH----HHHHHhcCC------CCEEEEeCcccccCC--------CC---HHHHHHHHHhCCCCCEEEEeCCCCCHHHHH
Confidence 333 3345567 8 788877765443321 11 12233445555 3578888999 899999
Q ss_pred HHHHcCCCcEEEechHHhhCchHHHHHH
Q 025135 189 QALAEDGADLVAYGRLFISNPDLVLRFK 216 (257)
Q Consensus 189 ~~l~~g~~D~V~igR~~iadP~l~~k~~ 216 (257)
.+.+. +|.|.+|.+++..+|....++
T Consensus 219 ~~~~~--a~avLVG~aimr~~d~~~~~~ 244 (251)
T 1i4n_A 219 DLRGK--VNAVLVGTSIMKAENPRRFLE 244 (251)
T ss_dssp HHTTT--CSEEEECHHHHHCSSHHHHHH
T ss_pred HHHHh--CCEEEEcHHHcCCcCHHHHHH
Confidence 99866 999999999999887766554
No 265
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=96.84 E-value=0.038 Score=52.64 Aligned_cols=107 Identities=14% Similarity=0.082 Sum_probs=63.1
Q ss_pred HHHHHHHhCCC-eEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchh
Q 025135 82 VREVIVAIGAD-RVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDE 160 (257)
Q Consensus 82 v~aiR~~vg~~-~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~ 160 (257)
+..+|+..|++ .|++=.+ +.+++. ...+.|.. -+|||-+. |-|....+. .....+.
T Consensus 98 ~~~ar~~lg~~~iiG~S~h------------t~eea~----~A~~~G~~---~aDYv~~G-pvf~T~tK~---~~~~~~~ 154 (540)
T 3nl6_A 98 IPMIRKLVGPDMVIGWSVG------------FPEEVD----ELSKMGPD---MVDYIGVG-TLFPTLTKK---NPKKAPM 154 (540)
T ss_dssp HHHHHHHHCTTSEEEEEEC------------SHHHHH----HHHHTCC-----CCEEEES-CCSCCCCCC-------CCC
T ss_pred HHHHHHHhCCCCEEEEECC------------CHHHHH----HHHHcCCC---CCCEEEEc-CCCCCCCCC---CcCCCCC
Confidence 34567777776 5676544 244432 33444400 05888773 333221110 0000112
Q ss_pred HHHHHHHHHHH------hCCcEEEeCCCCHHHHHHHHHc-------CCCcEEEechHHhhCchH
Q 025135 161 EAQLLRTWRRS------YQGTFICSGGFTRELGIQALAE-------DGADLVAYGRLFISNPDL 211 (257)
Q Consensus 161 ~~~~~~~ir~~------~~~pvi~~G~it~~~a~~~l~~-------g~~D~V~igR~~iadP~l 211 (257)
-...++.+++. .++||++-|||+++.+.++++. -++|.|+++++++..+|.
T Consensus 155 G~~~l~~i~~~~~~~~~~~iPvvAIGGI~~~ni~~v~~~~~~~g~~~GadgvAVvsaI~~a~dp 218 (540)
T 3nl6_A 155 GTAGAIRVLDALERNNAHWCRTVGIGGLHPDNIERVLYQCVSSNGKRSLDGICVVSDIIASLDA 218 (540)
T ss_dssp HHHHHHHHHHHHHHTTCTTCEEEEESSCCTTTHHHHHHHCBCTTSSCBCSCEEESHHHHTCTTH
T ss_pred CHHHHHHHHHHHHhhccCCCCEEEEcCCCHHHHHHHHHhhcccccccCceEEEEeHHHhcCCCH
Confidence 23445555554 3799999999999999999972 249999999999986654
No 266
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=96.83 E-value=0.004 Score=51.46 Aligned_cols=46 Identities=17% Similarity=0.091 Sum_probs=42.0
Q ss_pred HHHHHHHHHhCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCc
Q 025135 163 QLLRTWRRSYQGTFICSGGF-TRELGIQALAEDGADLVAYGRLFISNP 209 (257)
Q Consensus 163 ~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~iadP 209 (257)
..++++++.+++|||++|.+ |.++++++++.| +|+|+.+...+.+-
T Consensus 140 ~iI~~i~~~~~~PiIaGGlI~~~edv~~al~aG-A~aVsTs~~~LW~~ 186 (192)
T 3kts_A 140 EQVQKMTQKLHIPVIAGGLIETSEQVNQVIASG-AIAVTTSNKHLWEG 186 (192)
T ss_dssp HHHHHHHHHHCCCEEEESSCCSHHHHHHHHTTT-EEEEEECCGGGGTT
T ss_pred HHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcC-CeEEEeCCHHHhCc
Confidence 57788999999999999999 899999999998 99999999888764
No 267
>3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae}
Probab=96.83 E-value=0.014 Score=54.43 Aligned_cols=103 Identities=11% Similarity=0.071 Sum_probs=69.5
Q ss_pred HHHHH-HHHHHH---hCCC-eEEEEEccCCCCCC--C----CC---CCcHHHHHHHHHH-HHhcCCccCCceeEEEeeCC
Q 025135 78 LMQLV-REVIVA---IGAD-RVGVRMSPAIDHLD--A----TD---SDPLGLGLAVIQG-LNKLQIDQGAKLTYLHVTQP 142 (257)
Q Consensus 78 ~~eiv-~aiR~~---vg~~-~v~vrls~~~~~~~--~----~~---~~~~~~~~~l~~~-L~~~G~~~~~~vd~i~v~~~ 142 (257)
.++.| ++||++ +|++ .|.+..+..+.|+. + .+ ..+.+++.++++. |++.+ +.||+ +|
T Consensus 242 ~l~~i~~AIr~agy~~G~dv~l~vD~aase~~~~~~g~Y~l~~~~~~~t~~eai~~~~~lle~y~------i~~IE--dP 313 (449)
T 3uj2_A 242 AIEYILEAVKLAGYEPGRDFVLAMDAASSEWKGEKKGEYILPKCKRKFASEELVAHWKSLCERYP------IVSIE--DG 313 (449)
T ss_dssp HHHHHHHHHHHTTCCBTTTBEEEEECCGGGCBCSSTTEEECTTTCCEEEHHHHHHHHHHHHHHSC------EEEEE--SC
T ss_pred HHHHHHHHHHHhccccCCceEEEEEcchhhhccccCceeeccCcccccCHHHHHHHHHHHHHhcC------ceEEE--CC
Confidence 34444 899999 8987 68888765433431 0 00 1256778888865 88888 88887 65
Q ss_pred CcccCCCcCCCCCCCchhHHHHHHHHHHHh--CCcEEEeCCC-C-HHHHHHHHHcCCCcEEEec
Q 025135 143 RYTAYGQTESGRPGTEDEEAQLLRTWRRSY--QGTFICSGGF-T-RELGIQALAEDGADLVAYG 202 (257)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~G~i-t-~~~a~~~l~~g~~D~V~ig 202 (257)
- .+..+...+.+++.+ ++||++-..+ | ++++.++|+.+.||+|.+=
T Consensus 314 l--------------~~dD~eg~~~L~~~~~~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~iK 363 (449)
T 3uj2_A 314 L--------------DEEDWEGWQYMTRELGDKIQLVGDDLFVTNTERLNKGIKERCGNSILIK 363 (449)
T ss_dssp S--------------CTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEEC
T ss_pred C--------------CcchHHHHHHHHHHhCCCceEECCcceeCCHHHHHHHHHcCCCCEEEEC
Confidence 2 223345667788888 4555543344 4 9999999999999999764
No 268
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=96.82 E-value=0.0044 Score=52.81 Aligned_cols=48 Identities=19% Similarity=0.299 Sum_probs=43.2
Q ss_pred HHHHHHHHHHh-CCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCchH
Q 025135 162 AQLLRTWRRSY-QGTFICSGGF-TRELGIQALAEDGADLVAYGRLFISNPDL 211 (257)
Q Consensus 162 ~~~~~~ir~~~-~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~iadP~l 211 (257)
.+.++++++.. ++||++.||| ++++++++++ | +|.|.+|.+++.+|+-
T Consensus 178 ~~~i~~i~~~~~~~Pv~vGgGI~s~e~a~~~~~-g-Ad~VIVGSa~v~~~~~ 227 (234)
T 2f6u_A 178 PELVAEVKKVLDKARLFYGGGIDSREKAREMLR-Y-ADTIIVGNVIYEKGID 227 (234)
T ss_dssp HHHHHHHHHHCSSSEEEEESCCCSHHHHHHHHH-H-SSEEEECHHHHHHCHH
T ss_pred HHHHHHHHHhCCCCCEEEEecCCCHHHHHHHHh-C-CCEEEEChHHHhCHHH
Confidence 46778899998 9999999999 8999999888 6 9999999999999854
No 269
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=96.81 E-value=0.053 Score=47.39 Aligned_cols=121 Identities=13% Similarity=0.053 Sum_probs=77.8
Q ss_pred HHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCCCCC
Q 025135 28 RQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAIDHLD 106 (257)
Q Consensus 28 ~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~~~~ 106 (257)
.+-+.+..+.|.|||-+.+..|- |. -=|.+.|.+++ +.++++++.. +|.+=++.
T Consensus 24 ~~lv~~li~~Gv~gl~~~GttGE----~~-----------~Ls~~Er~~v~----~~~~~~~~gr~pviaGvg~------ 78 (292)
T 2vc6_A 24 HDLVEWQIEEGSFGLVPCGTTGE----SP-----------TLSKSEHEQVV----EITIKTANGRVPVIAGAGS------ 78 (292)
T ss_dssp HHHHHHHHHTTCSEEETTSGGGT----GG-----------GSCHHHHHHHH----HHHHHHHTTSSCBEEECCC------
T ss_pred HHHHHHHHHcCCCEEEECccccC----hh-----------hCCHHHHHHHH----HHHHHHhCCCCcEEEecCC------
Confidence 33344556789999998776532 11 11345666554 4444445433 66554442
Q ss_pred CCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEE------eC
Q 025135 107 ATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFIC------SG 180 (257)
Q Consensus 107 ~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~------~G 180 (257)
.+.++++++++..++.| +|.+-+..|.|..+ .........+.|.+++++||+. +|
T Consensus 79 ----~~t~~ai~la~~A~~~G------adavlv~~P~y~~~---------s~~~l~~~f~~ia~a~~lPiilYn~P~~tg 139 (292)
T 2vc6_A 79 ----NSTAEAIAFVRHAQNAG------ADGVLIVSPYYNKP---------TQEGIYQHFKAIDAASTIPIIVYNIPGRSA 139 (292)
T ss_dssp ----SSHHHHHHHHHHHHHTT------CSEEEEECCCSSCC---------CHHHHHHHHHHHHHHCSSCEEEEECHHHHS
T ss_pred ----ccHHHHHHHHHHHHHcC------CCEEEEcCCCCCCC---------CHHHHHHHHHHHHHhCCCCEEEEeCccccC
Confidence 35678999999999999 88888777765432 1233344556788888999877 45
Q ss_pred C-CCHHHHHHHHH
Q 025135 181 G-FTRELGIQALA 192 (257)
Q Consensus 181 ~-it~~~a~~~l~ 192 (257)
- ++++...++.+
T Consensus 140 ~~l~~~~~~~La~ 152 (292)
T 2vc6_A 140 IEIHVETLARIFE 152 (292)
T ss_dssp CCCCHHHHHHHHH
T ss_pred cCCCHHHHHHHHh
Confidence 3 58888888876
No 270
>1r6w_A OSB synthase, O-succinylbenzoate synthase, OSBS; enolase superfamily, TIM barrel, capping alpha+beta domain, lyase; HET: 164; 1.62A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1 PDB: 1fhv_A* 1fhu_A 2ofj_A 3gc2_A*
Probab=96.77 E-value=0.0017 Score=57.76 Aligned_cols=106 Identities=15% Similarity=0.078 Sum_probs=73.2
Q ss_pred cCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCCCCCcHHHH
Q 025135 37 AGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDATDSDPLGLG 116 (257)
Q Consensus 37 aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~ 116 (257)
.||..+.|+.|.. + .+--.+.+++||++++ + +.+++-.+.. .+.+++
T Consensus 127 ~G~~~~KiKvG~~--------------------~----~~~d~~~v~avr~~~~-~-~~l~vDaN~~-------~~~~~A 173 (322)
T 1r6w_A 127 PGEKVAKVRVGLY--------------------E----AVRDGMVVNLLLEAIP-D-LHLRLDANRA-------WTPLKG 173 (322)
T ss_dssp CSSEEEEEECSSS--------------------C----HHHHHHHHHHHHHHCT-T-EEEEEECTTC-------BCHHHH
T ss_pred CCCceEEEEeCCC--------------------C----HHHHHHHHHHHHHhCC-C-CeEEEeCCCC-------CCHHHH
Confidence 6999999986530 1 2345588999999984 4 3344433222 357889
Q ss_pred HHHHHHHHhc---CCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHHH
Q 025135 117 LAVIQGLNKL---QIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQALA 192 (257)
Q Consensus 117 ~~l~~~L~~~---G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~ 192 (257)
.++++.|++. + +.|++ +|- .. ....+.+++..++||++...+ +. +. ++++
T Consensus 174 ~~~~~~l~~~~~~~------i~~iE--qP~--------------~~--~~~~~~l~~~~~ipIa~dE~~~~~-~~-~~~~ 227 (322)
T 1r6w_A 174 QQFAKYVNPDYRDR------IAFLE--EPC--------------KT--RDDSRAFARETGIAIAWDESLREP-DF-AFVA 227 (322)
T ss_dssp HHHHHTSCTTTGGG------EEEEE--CCB--------------SS--HHHHHHHHHHHCCCEEESGGGGST-TC-CCCC
T ss_pred HHHHHHhhhhccCC------eeEEE--CCC--------------CC--hHHHHHHHHhCCCCEEeCCCCCCh-hH-hhhh
Confidence 9999999988 7 88887 652 11 234577888889999887776 64 34 5567
Q ss_pred cCCCcEEEe
Q 025135 193 EDGADLVAY 201 (257)
Q Consensus 193 ~g~~D~V~i 201 (257)
.+.+|+|.+
T Consensus 228 ~~a~d~i~i 236 (322)
T 1r6w_A 228 EEGVRAVVI 236 (322)
T ss_dssp CTTEEEEEE
T ss_pred cCCCCEEEE
Confidence 778888876
No 271
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=96.77 E-value=0.024 Score=47.94 Aligned_cols=105 Identities=12% Similarity=0.216 Sum_probs=67.3
Q ss_pred HHHHHH---HHHHHhCCCeEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEee--CCCcccCCCcCC
Q 025135 78 LMQLVR---EVIVAIGADRVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVT--QPRYTAYGQTES 152 (257)
Q Consensus 78 ~~eiv~---aiR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~--~~~~~~~~~~~~ 152 (257)
+.+.++ .+|+. |. .+++=+++. ++.+ .++.+.+.|. +|++-+. +|.+.+..
T Consensus 100 ~~~~i~~~~~i~~~-G~-k~gvalnp~---------tp~~----~~~~~l~~g~-----~D~VlvmsV~pGf~gq~---- 155 (227)
T 1tqx_A 100 TERCIQLAKEIRDN-NL-WCGISIKPK---------TDVQ----KLVPILDTNL-----INTVLVMTVEPGFGGQS---- 155 (227)
T ss_dssp HHHHHHHHHHHHTT-TC-EEEEEECTT---------SCGG----GGHHHHTTTC-----CSEEEEESSCTTCSSCC----
T ss_pred HHHHHHHHHHHHHc-CC-eEEEEeCCC---------CcHH----HHHHHhhcCC-----cCEEEEeeeccCCCCcc----
Confidence 556677 66653 32 567777653 2222 2334444431 6776432 34444322
Q ss_pred CCCCCchhHHHHHHHHHHHh-CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCchH
Q 025135 153 GRPGTEDEEAQLLRTWRRSY-QGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNPDL 211 (257)
Q Consensus 153 ~~~~~~~~~~~~~~~ir~~~-~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP~l 211 (257)
..+.....++++|+.. +.+|.+-||++++.+.++++.| +|.+..|++....+|.
T Consensus 156 ----f~~~~l~ki~~lr~~~~~~~I~VdGGI~~~ti~~~~~aG-Ad~~V~GsaIf~~~d~ 210 (227)
T 1tqx_A 156 ----FMHDMMGKVSFLRKKYKNLNIQVDGGLNIETTEISASHG-ANIIVAGTSIFNAEDP 210 (227)
T ss_dssp ----CCGGGHHHHHHHHHHCTTCEEEEESSCCHHHHHHHHHHT-CCEEEESHHHHTCSSH
T ss_pred ----cchHHHHHHHHHHHhccCCeEEEECCCCHHHHHHHHHcC-CCEEEEeHHHhCCCCH
Confidence 2233445566777776 5778889999999999999998 9999999999976654
No 272
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=96.75 E-value=0.017 Score=48.55 Aligned_cols=53 Identities=15% Similarity=0.145 Sum_probs=40.0
Q ss_pred HHHHHHHHHh-CCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCchHHHHHH
Q 025135 163 QLLRTWRRSY-QGTFICSGGF-TRELGIQALAEDGADLVAYGRLFISNPDLVLRFK 216 (257)
Q Consensus 163 ~~~~~ir~~~-~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~ 216 (257)
...+.+|+.. ++||+..||+ ++++++.+.+.| +|.|.+|.+++.-+++.+.++
T Consensus 159 ~~~~~ir~~~~~~~ii~ggGI~~~~~~~~~~~~g-aDgvlVGsAi~~~~d~~~~~~ 213 (219)
T 2h6r_A 159 GTVRAVKEINKDVKVLCGAGISKGEDVKAALDLG-AEGVLLASGVVKAKNVEEAIR 213 (219)
T ss_dssp HHHHHHHHHCTTCEEEECSSCCSHHHHHHHHTTT-CCCEEESHHHHTCSSHHHHHH
T ss_pred HHHHHHHhccCCCeEEEEeCcCcHHHHHHHhhCC-CCEEEEcHHHhCcccHHHHHH
Confidence 3444556554 6899999999 678877776665 999999999998877765554
No 273
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=96.72 E-value=0.005 Score=53.65 Aligned_cols=112 Identities=11% Similarity=0.065 Sum_probs=68.5
Q ss_pred CCcCCCCCCch--hhHhhH---HHHHHHHHHHHhCCC-eEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCce
Q 025135 61 NDRTDEYGGSI--ENRCRF---LMQLVREVIVAIGAD-RVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKL 134 (257)
Q Consensus 61 N~R~D~yGGs~--enR~r~---~~eiv~aiR~~vg~~-~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~v 134 (257)
|+|...++.-+ .|...+ ..+-++++|+..+.. +|.+-.. +.++..+ ..+.| +
T Consensus 146 ~hr~~l~d~vlik~~Hi~~~g~~~~ai~~~r~~~~~~~~i~vev~------------tlee~~~----A~~aG------a 203 (273)
T 2b7n_A 146 NHRLGLDDALMLKDTHLRHVKDLKSFLTHARKNLPFTAKIEIECE------------SFEEAKN----AMNAG------A 203 (273)
T ss_dssp CCCSSTTTCEEECHHHHTTCSSHHHHHHHHGGGSCTTCCEEEEES------------SHHHHHH----HHHHT------C
T ss_pred ceEcCccceEEeeCCHHHHhCCHHHHHHHHHHhCCCCceEEEEcC------------CHHHHHH----HHHcC------C
Confidence 55555554432 333333 267788889888764 5666332 3444332 23468 8
Q ss_pred eEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh-CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCc
Q 025135 135 TYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY-QGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNP 209 (257)
Q Consensus 135 d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP 209 (257)
|+|-+... .........+.++..+ .+||.++||+|++.+.++++.| +|.|++|.....-|
T Consensus 204 D~I~ld~~--------------~~~~l~~~v~~l~~~~~~~~i~AsGGI~~~ni~~~~~aG-aD~i~vGs~i~~a~ 264 (273)
T 2b7n_A 204 DIVMCDNL--------------SVLETKEIAAYRDAHYPFVLLEASGNISLESINAYAKSG-VDAISVGALIHQAT 264 (273)
T ss_dssp SEEEEETC--------------CHHHHHHHHHHHHHHCTTCEEEEESSCCTTTHHHHHTTT-CSEEECTHHHHTCC
T ss_pred CEEEECCC--------------CHHHHHHHHHHhhccCCCcEEEEECCCCHHHHHHHHHcC-CcEEEEcHHhcCCC
Confidence 88876531 1111112222333322 2789999999999999999988 89999999866544
No 274
>3caw_A O-succinylbenzoate synthase; structural genomics, PSI-2, NYSGXRC, target 9462A, protein structure initiative; 1.87A {Bdellovibrio bacteriovorus HD100}
Probab=96.69 E-value=0.0027 Score=56.56 Aligned_cols=106 Identities=8% Similarity=0.092 Sum_probs=74.9
Q ss_pred HHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCCCCCc
Q 025135 33 NAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDATDSDP 112 (257)
Q Consensus 33 ~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~~~ 112 (257)
.+.+.||..+.|..|. ++ +--.+.|++||+ ++-.|.+..|. . .+
T Consensus 118 ~~~~~G~~~~KiKvg~---------------------~~----~~d~~~v~avr~--~~~~l~vDaN~--~-------~~ 161 (330)
T 3caw_A 118 GLKNEGYNTVKVKMGR---------------------DL----QKEADMLTHIAA--SGMRMRLDFNA--L-------GS 161 (330)
T ss_dssp HHHHHTCCEEEEECSS---------------------CH----HHHHHHHHHHHH--TTCEEEEECTT--C-------SC
T ss_pred HHHHcCCcEEEEecCC---------------------CH----HHHHHHHHHHhC--CCCeEEEECCC--C-------CC
Confidence 4446799999997642 22 234678999998 32145444442 2 35
Q ss_pred HHHHHHHHHHHHh---cCCccCCceeEEEeeCCCcccCCCcCCCCCCCchh-HHHHHHHHHHHhCCcEEEeCCCCHHHHH
Q 025135 113 LGLGLAVIQGLNK---LQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDE-EAQLLRTWRRSYQGTFICSGGFTRELGI 188 (257)
Q Consensus 113 ~~~~~~l~~~L~~---~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ir~~~~~pvi~~G~it~~~a~ 188 (257)
.+++.++++.|++ .+ +.||+ +|- .+. ..... ++ .. +||.+... +.+++.
T Consensus 162 ~~~A~~~~~~l~~~~~~~------l~~iE--qP~--------------~~~~d~~~~--l~-~~-iPIa~dEs-~~~~~~ 214 (330)
T 3caw_A 162 WQTFEKFMVNLPLTVRPL------IEYVE--DPF--------------PFDFHAWGE--AR-KL-AKIALDNQ-YDKVPW 214 (330)
T ss_dssp HHHHHHHHHTSCTTTGGG------EEEEE--CCS--------------SCCHHHHHH--HT-TT-SCEEESTT-GGGCCT
T ss_pred HHHHHHHHHHhhhhccCC------ceEEE--CCC--------------CCCccHHHH--HH-hc-CcEEeCCC-CHHHHH
Confidence 7889999999998 78 88887 652 111 22222 67 77 99999888 889999
Q ss_pred HHHHcCCCcEEEe
Q 025135 189 QALAEDGADLVAY 201 (257)
Q Consensus 189 ~~l~~g~~D~V~i 201 (257)
++++.+.+|+|.+
T Consensus 215 ~~i~~~a~d~v~~ 227 (330)
T 3caw_A 215 GKIASAPFDVIVI 227 (330)
T ss_dssp TTCSSCSCSEEEE
T ss_pred HHHHcCCCCEEEe
Confidence 9999999999987
No 275
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=96.69 E-value=0.0011 Score=57.31 Aligned_cols=78 Identities=12% Similarity=0.023 Sum_probs=61.0
Q ss_pred HHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCCCHHHHHHHHHcCCC
Q 025135 117 LAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGFTRELGIQALAEDGA 196 (257)
Q Consensus 117 ~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~it~~~a~~~l~~g~~ 196 (257)
.++|+.+.+.| ++.+|+..-. . .+...++.+.+.+.+||...||++..++++++ .| +
T Consensus 41 ~~~A~~~~~~G------a~~l~vvDL~-------------~--~n~~~i~~i~~~~~~pv~vgGGir~~~~~~~l-~G-a 97 (260)
T 2agk_A 41 SYYAKLYKDRD------VQGCHVIKLG-------------P--NNDDAAREALQESPQFLQVGGGINDTNCLEWL-KW-A 97 (260)
T ss_dssp HHHHHHHHHTT------CTTCEEEEES-------------S--SCHHHHHHHHHHSTTTSEEESSCCTTTHHHHT-TT-C
T ss_pred HHHHHHHHHcC------CCEEEEEeCC-------------C--CCHHHHHHHHhcCCceEEEeCCCCHHHHHHHh-cC-C
Confidence 56888899999 7777764310 0 12356677888899999999999433899999 66 9
Q ss_pred cEEEechHHhhC-----chHHHHHHc
Q 025135 197 DLVAYGRLFISN-----PDLVLRFKL 217 (257)
Q Consensus 197 D~V~igR~~iad-----P~l~~k~~~ 217 (257)
|-|.+|..++.| |++++++.+
T Consensus 98 ~~Viigs~a~~~~g~~~p~~~~~~~~ 123 (260)
T 2agk_A 98 SKVIVTSWLFTKEGHFQLKRLERLTE 123 (260)
T ss_dssp SCEEECGGGBCTTCCBCHHHHHHHHH
T ss_pred CEEEECcHHHhhcCCCCHHHHHHHHH
Confidence 999999999999 999998865
No 276
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=96.67 E-value=0.01 Score=64.49 Aligned_cols=94 Identities=12% Similarity=0.023 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHhcCCccCCceeEEE---eeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHH
Q 025135 114 GLGLAVIQGLNKLQIDQGAKLTYLH---VTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQ 189 (257)
Q Consensus 114 ~~~~~l~~~L~~~G~~~~~~vd~i~---v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~ 189 (257)
.++...+..+.++| +|.+. +.++...+.. +...........+..|++.+++|||+.||| |.+++.+
T Consensus 703 ~~a~~~v~~l~~aG------~D~iV~~q~~G~eaGGH~----g~~d~~~~~l~lv~~i~~~~~ipviaaGGI~~g~~i~a 772 (2060)
T 2uva_G 703 VDAIQQVINIAKAN------PTFPIILQWTGGRGGGHH----SFEDFHQPILLMYSRIRKCSNIVLVAGSGFGGSEDTYP 772 (2060)
T ss_dssp HHHHHHHHHHHHHC------TTSCEEEEECCTTSSSSC----CSCCSHHHHHHHHHHHHTSTTEEEEEESSCCSHHHHHH
T ss_pred HHHHHHHHHHHHcC------CCEEEEeeeEcccCCCCC----CcccccchHHHHHHHHHHHcCCCEEEeCCCCCHHHHHH
Confidence 45666666778888 55544 4332111110 000001233456778999999999999999 9999999
Q ss_pred HH-----------HcCCCcEEEechHHhhC------chHHHHHHcC
Q 025135 190 AL-----------AEDGADLVAYGRLFISN------PDLVLRFKLN 218 (257)
Q Consensus 190 ~l-----------~~g~~D~V~igR~~iad------P~l~~k~~~g 218 (257)
+| .-| +|+|+||+.|++= |.+-+.+.+-
T Consensus 773 altg~ws~~~g~palG-AdgV~~GT~f~~t~Ea~~s~~~K~~lv~a 817 (2060)
T 2uva_G 773 YLTGSWSTKFGYPPMP-FDGCMFGSRMMTAKEAHTSKQAKQAIVDA 817 (2060)
T ss_dssp HHHTCGGGTTTSCCCC-CSCEEESGGGGGBTTSCCCHHHHHHHHTS
T ss_pred HhcCcchhhcCCCCCC-CCEEEEchhhhcCcCCCCCHHHHHHHHhC
Confidence 99 887 9999999999953 4444555543
No 277
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=96.66 E-value=0.017 Score=53.37 Aligned_cols=102 Identities=8% Similarity=0.008 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHh---CC--C-eEEEEEccCCCCCCCC-----CCCcHHHHHHHH-HHHHhcCCccCCceeEEEeeCCCcc
Q 025135 78 LMQLVREVIVAI---GA--D-RVGVRMSPAIDHLDAT-----DSDPLGLGLAVI-QGLNKLQIDQGAKLTYLHVTQPRYT 145 (257)
Q Consensus 78 ~~eiv~aiR~~v---g~--~-~v~vrls~~~~~~~~~-----~~~~~~~~~~l~-~~L~~~G~~~~~~vd~i~v~~~~~~ 145 (257)
..+.|++||+++ |+ + .|.+.....+.|+++. ...+.+++++++ +.|++.+ +.||+ +|-
T Consensus 223 d~~~v~~vreav~~~G~~~~~~L~vDa~as~~~~n~~~~~~n~~~~~~~ai~~~~~~l~~~~------i~~iE--eP~-- 292 (427)
T 2pa6_A 223 SREALDLLTESVKKAGYEDEVVFALDAAASEFYKDGYYYVEGKKLTREELLDYYKALVDEYP------IVSIE--DPF-- 292 (427)
T ss_dssp HHHHHHHHHHHHHHHTCTTTCEEEEECCGGGGEETTEEEETTEEECHHHHHHHHHHHHHHSC------EEEEE--CCS--
T ss_pred hHHHHHHHHHHHHHhCCCCCcEEEEEcchhccccCCceeecCCCCCHHHHHHHHHHHHhhCC------CcEEE--cCC--
Confidence 357788888888 86 5 4555552211111110 011466777775 5889998 88887 652
Q ss_pred cCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCC-CC-HHHHHHHHHcCCCcEEEe
Q 025135 146 AYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGG-FT-RELGIQALAEDGADLVAY 201 (257)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~-it-~~~a~~~l~~g~~D~V~i 201 (257)
.+......+.+++..++||++... ++ ++++.++|+.+.+|+|.+
T Consensus 293 ------------~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~i~i 338 (427)
T 2pa6_A 293 ------------HEEDFEGFAMITKELDIQIVGDDLFVTNVERLRKGIEMKAANALLL 338 (427)
T ss_dssp ------------CTTCHHHHHHHHHHSSSEEEESTTTTTCHHHHHHHHHHTCCSEEEE
T ss_pred ------------ChhhHHHHHHHHhhCCCeEEeCccccCCHHHHHHHHHhCCCCEEEE
Confidence 122345667788888999988776 45 999999999999999987
No 278
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=96.62 E-value=0.11 Score=46.40 Aligned_cols=129 Identities=14% Similarity=0.122 Sum_probs=81.8
Q ss_pred CChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-e
Q 025135 15 LQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-R 93 (257)
Q Consensus 15 lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~ 93 (257)
+..+.++++++ ...+.|.|||-+.+.-|- |. -=|.+.|.++ ++.++++++.. +
T Consensus 52 iD~~~l~~lv~-------~li~~Gv~Gl~v~GtTGE----~~-----------~Ls~eEr~~v----i~~~ve~~~grvp 105 (332)
T 2r8w_A 52 VDIEAFSALIA-------RLDAAEVDSVGILGSTGI----YM-----------YLTREERRRA----IEAAATILRGRRT 105 (332)
T ss_dssp BCHHHHHHHHH-------HHHHHTCSEEEESSTTTT----GG-----------GSCHHHHHHH----HHHHHHHHTTSSE
T ss_pred cCHHHHHHHHH-------HHHHcCCCEEEECccccC----hh-----------hCCHHHHHHH----HHHHHHHhCCCCc
Confidence 44444444444 456689999998876532 11 0134556555 44555555443 7
Q ss_pred EEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhC
Q 025135 94 VGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQ 173 (257)
Q Consensus 94 v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~ 173 (257)
|.+=++. .+..+++++++..++.| +|.+-+..|.|..+ .........+.|.++++
T Consensus 106 ViaGvg~----------~st~eai~la~~A~~~G------adavlv~~P~Y~~~---------s~~~l~~~f~~VA~a~~ 160 (332)
T 2r8w_A 106 LMAGIGA----------LRTDEAVALAKDAEAAG------ADALLLAPVSYTPL---------TQEEAYHHFAAVAGATA 160 (332)
T ss_dssp EEEEECC----------SSHHHHHHHHHHHHHHT------CSEEEECCCCSSCC---------CHHHHHHHHHHHHHHCS
T ss_pred EEEecCC----------CCHHHHHHHHHHHHhcC------CCEEEECCCCCCCC---------CHHHHHHHHHHHHHhcC
Confidence 7665553 35788999999999999 88888777765432 12333445577888889
Q ss_pred CcEEEe------CC-CCHHHHHHHHHcC
Q 025135 174 GTFICS------GG-FTRELGIQALAED 194 (257)
Q Consensus 174 ~pvi~~------G~-it~~~a~~~l~~g 194 (257)
+||+.- |- ++++...++.+..
T Consensus 161 lPiilYn~P~~tg~~l~~e~~~~La~~p 188 (332)
T 2r8w_A 161 LPLAIYNNPTTTRFTFSDELLVRLAYIP 188 (332)
T ss_dssp SCEEEECCHHHHCCCCCHHHHHHHHTST
T ss_pred CCEEEEeCccccCcCCCHHHHHHHHcCC
Confidence 997752 32 4888888887543
No 279
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=96.61 E-value=0.13 Score=44.82 Aligned_cols=121 Identities=12% Similarity=0.050 Sum_probs=77.1
Q ss_pred HHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCCCC
Q 025135 27 YRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAIDHL 105 (257)
Q Consensus 27 f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~~~ 105 (257)
+.+-+....+.|.|||-+.+..|- |. -=|.+.|.++ ++.++++++.. +|.+=++.
T Consensus 23 l~~lv~~li~~Gv~gl~~~GttGE----~~-----------~Ls~~Er~~v----~~~~~~~~~gr~pviaGvg~----- 78 (289)
T 2yxg_A 23 LEENINFLIENGVSGIVAVGTTGE----SP-----------TLSHEEHKKV----IEKVVDVVNGRVQVIAGAGS----- 78 (289)
T ss_dssp HHHHHHHHHHTTCSEEEESSTTTT----GG-----------GSCHHHHHHH----HHHHHHHHTTSSEEEEECCC-----
T ss_pred HHHHHHHHHHCCCCEEEECccccC----hh-----------hCCHHHHHHH----HHHHHHHhCCCCcEEEeCCC-----
Confidence 334444556799999998776532 11 0134556555 44445555443 66654442
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEE-e-----
Q 025135 106 DATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFIC-S----- 179 (257)
Q Consensus 106 ~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~-~----- 179 (257)
.+.++++++++..++.| +|.+-+..|.|..+ .........+.|.++.++||+. +
T Consensus 79 -----~~t~~ai~la~~a~~~G------adavlv~~P~y~~~---------s~~~l~~~f~~ia~a~~lPiilYn~P~~t 138 (289)
T 2yxg_A 79 -----NCTEEAIELSVFAEDVG------ADAVLSITPYYNKP---------TQEGLRKHFGKVAESINLPIVLYNVPSRT 138 (289)
T ss_dssp -----SSHHHHHHHHHHHHHHT------CSEEEEECCCSSCC---------CHHHHHHHHHHHHHHCSSCEEEEECHHHH
T ss_pred -----CCHHHHHHHHHHHHhcC------CCEEEECCCCCCCC---------CHHHHHHHHHHHHHhcCCCEEEEeCcccc
Confidence 35788999999999999 88888777765432 1223344556788888899765 2
Q ss_pred CC-CCHHHHHHHH
Q 025135 180 GG-FTRELGIQAL 191 (257)
Q Consensus 180 G~-it~~~a~~~l 191 (257)
|. ++++...++.
T Consensus 139 g~~l~~~~~~~La 151 (289)
T 2yxg_A 139 AVNLEPKTVKLLA 151 (289)
T ss_dssp SCCCCHHHHHHHH
T ss_pred CcCCCHHHHHHHH
Confidence 33 4888888877
No 280
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=96.60 E-value=0.12 Score=45.30 Aligned_cols=130 Identities=15% Similarity=0.186 Sum_probs=82.1
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-
Q 025135 14 ALQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD- 92 (257)
Q Consensus 14 ~lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~- 92 (257)
.+..+.++++++ ...+.|.|||-+.+..|- |. -=|.+.|.++ ++.++++++..
T Consensus 28 ~iD~~~l~~lv~-------~li~~Gv~Gl~v~GtTGE----~~-----------~Ls~eEr~~v----~~~~~~~~~grv 81 (303)
T 2wkj_A 28 ALDKASLRRLVQ-------FNIQQGIDGLYVGGSTGE----AF-----------VQSLSEREQV----LEIVAEEAKGKI 81 (303)
T ss_dssp SBCHHHHHHHHH-------HHHHTTCSEEEESSTTTT----GG-----------GSCHHHHHHH----HHHHHHHHTTTS
T ss_pred CcCHHHHHHHHH-------HHHHcCCCEEEECeeccC----hh-----------hCCHHHHHHH----HHHHHHHhCCCC
Confidence 344455555554 456799999998776532 11 1134566655 44444555433
Q ss_pred eEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh
Q 025135 93 RVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY 172 (257)
Q Consensus 93 ~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~ 172 (257)
+|.+=++. .+..+++++++..++.| +|.+-+..|.|..+ .........+.|.+++
T Consensus 82 pViaGvg~----------~~t~~ai~la~~A~~~G------adavlv~~P~y~~~---------s~~~l~~~f~~va~a~ 136 (303)
T 2wkj_A 82 KLIAHVGC----------VSTAESQQLAASAKRYG------FDAVSAVTPFYYPF---------SFEEHCDHYRAIIDSA 136 (303)
T ss_dssp EEEEECCC----------SSHHHHHHHHHHHHHHT------CSEEEEECCCSSCC---------CHHHHHHHHHHHHHHH
T ss_pred cEEEecCC----------CCHHHHHHHHHHHHhCC------CCEEEecCCCCCCC---------CHHHHHHHHHHHHHhC
Confidence 66654443 35788999999999999 88888777765432 1223344556788888
Q ss_pred C-CcEEE-e-----CC-CCHHHHHHHHHcC
Q 025135 173 Q-GTFIC-S-----GG-FTRELGIQALAED 194 (257)
Q Consensus 173 ~-~pvi~-~-----G~-it~~~a~~~l~~g 194 (257)
+ +||+. + |- ++++...++.+..
T Consensus 137 ~~lPiilYn~P~~tg~~l~~~~~~~La~~p 166 (303)
T 2wkj_A 137 DGLPMVVYNIPALSGVKLTLDQINTLVTLP 166 (303)
T ss_dssp TTCCEEEEECHHHHCCCCCHHHHHHHHTST
T ss_pred CCCCEEEEeCccccCCCCCHHHHHHHhcCC
Confidence 8 99765 2 32 4888888876543
No 281
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=96.59 E-value=0.12 Score=45.46 Aligned_cols=123 Identities=11% Similarity=0.103 Sum_probs=77.4
Q ss_pred HHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCCCCC
Q 025135 28 RQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAIDHLD 106 (257)
Q Consensus 28 ~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~~~~ 106 (257)
.+-+.+..+.|.|||-+.+..|- |. -=|.+.|.+++ +.++++++.. +|.+=++.
T Consensus 36 ~~lv~~li~~Gv~gl~v~GtTGE----~~-----------~Ls~eEr~~v~----~~~~~~~~grvpViaGvg~------ 90 (301)
T 1xky_A 36 TKLVNYLIDNGTTAIVVGGTTGE----SP-----------TLTSEEKVALY----RHVVSVVDKRVPVIAGTGS------ 90 (301)
T ss_dssp HHHHHHHHHTTCCEEEESSTTTT----GG-----------GSCHHHHHHHH----HHHHHHHTTSSCEEEECCC------
T ss_pred HHHHHHHHHcCCCEEEECccccC----hh-----------hCCHHHHHHHH----HHHHHHhCCCceEEeCCCC------
Confidence 33334556789999998776532 11 01345666554 4444445433 66654443
Q ss_pred CCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEE-e-----C
Q 025135 107 ATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFIC-S-----G 180 (257)
Q Consensus 107 ~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~-~-----G 180 (257)
.+.++++++++..++.| +|.+-+..|.|..+ .........+.|.+++++||+. + |
T Consensus 91 ----~~t~~ai~la~~A~~~G------adavlv~~P~y~~~---------s~~~l~~~f~~va~a~~lPiilYn~P~~tg 151 (301)
T 1xky_A 91 ----NNTHASIDLTKKATEVG------VDAVMLVAPYYNKP---------SQEGMYQHFKAIAESTPLPVMLYNVPGRSI 151 (301)
T ss_dssp ----SCHHHHHHHHHHHHHTT------CSEEEEECCCSSCC---------CHHHHHHHHHHHHHTCSSCEEEEECHHHHS
T ss_pred ----CCHHHHHHHHHHHHhcC------CCEEEEcCCCCCCC---------CHHHHHHHHHHHHHhcCCCEEEEeCccccC
Confidence 35788999999999999 88888777765432 1223344556788888899765 2 3
Q ss_pred C-CCHHHHHHHHHcC
Q 025135 181 G-FTRELGIQALAED 194 (257)
Q Consensus 181 ~-it~~~a~~~l~~g 194 (257)
. ++++...++.+..
T Consensus 152 ~~l~~~~~~~La~~p 166 (301)
T 1xky_A 152 VQISVDTVVRLSEIE 166 (301)
T ss_dssp SCCCHHHHHHHHTST
T ss_pred CCCCHHHHHHHHcCC
Confidence 2 4788888876533
No 282
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=96.55 E-value=0.14 Score=44.68 Aligned_cols=120 Identities=11% Similarity=0.044 Sum_probs=76.7
Q ss_pred HHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCCCCC
Q 025135 28 RQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAIDHLD 106 (257)
Q Consensus 28 ~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~~~~ 106 (257)
.+-+....+.|.|||-+.+..|- |. -=|.+.|.++ ++.++++++.. +|.+=++.
T Consensus 24 ~~lv~~li~~Gv~gl~~~GttGE----~~-----------~Ls~~Er~~v----~~~~~~~~~grvpviaGvg~------ 78 (294)
T 2ehh_A 24 GNLIEFHVDNGTDAILVCGTTGE----SP-----------TLTFEEHEKV----IEFAVKRAAGRIKVIAGTGG------ 78 (294)
T ss_dssp HHHHHHHHTTTCCEEEESSTTTT----GG-----------GSCHHHHHHH----HHHHHHHHTTSSEEEEECCC------
T ss_pred HHHHHHHHHCCCCEEEECccccC----hh-----------hCCHHHHHHH----HHHHHHHhCCCCcEEEecCC------
Confidence 33344556789999998776531 11 0134556555 44445555433 66654442
Q ss_pred CCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEE-e-----C
Q 025135 107 ATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFIC-S-----G 180 (257)
Q Consensus 107 ~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~-~-----G 180 (257)
.+.++++++++..++.| +|.+-+..|.|..+ .........+.|.+++++||+. + |
T Consensus 79 ----~~t~~ai~la~~A~~~G------adavlv~~P~y~~~---------s~~~l~~~f~~va~a~~lPiilYn~P~~tg 139 (294)
T 2ehh_A 79 ----NATHEAVHLTAHAKEVG------ADGALVVVPYYNKP---------TQRGLYEHFKTVAQEVDIPIIIYNIPSRTC 139 (294)
T ss_dssp ----SCHHHHHHHHHHHHHTT------CSEEEEECCCSSCC---------CHHHHHHHHHHHHHHCCSCEEEEECHHHHS
T ss_pred ----CCHHHHHHHHHHHHhcC------CCEEEECCCCCCCC---------CHHHHHHHHHHHHHhcCCCEEEEeCCcccC
Confidence 35788999999999999 88888777765432 1233344556788888999765 2 4
Q ss_pred C-CCHHHHHHHH
Q 025135 181 G-FTRELGIQAL 191 (257)
Q Consensus 181 ~-it~~~a~~~l 191 (257)
- ++++...++.
T Consensus 140 ~~l~~~~~~~La 151 (294)
T 2ehh_A 140 VEISVDTMFKLA 151 (294)
T ss_dssp CCCCHHHHHHHH
T ss_pred cCCCHHHHHHHH
Confidence 2 4888888877
No 283
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=96.52 E-value=0.014 Score=53.21 Aligned_cols=99 Identities=20% Similarity=0.163 Sum_probs=63.1
Q ss_pred hHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCC
Q 025135 76 RFLMQLVREVIVAIGADRVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRP 155 (257)
Q Consensus 76 r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~ 155 (257)
.+..++++.++++ +. ++.+.+++. . ..++++.+.+.| ++++.++........ .
T Consensus 142 ~~~~~~i~~~~~~-g~-~v~~~v~~~---------~----~~e~a~~~~~ag------ad~i~i~~~~~~~~~------~ 194 (393)
T 2qr6_A 142 ELLSERIAQVRDS-GE-IVAVRVSPQ---------N----VREIAPIVIKAG------ADLLVIQGTLISAEH------V 194 (393)
T ss_dssp HHHHHHHHHHHHT-TS-CCEEEECTT---------T----HHHHHHHHHHTT------CSEEEEECSSCCSSC------C
T ss_pred HHHHHHHHHHhhc-CC-eEEEEeCCc---------c----HHHHHHHHHHCC------CCEEEEeCCcccccc------C
Confidence 4566788888875 32 677777642 1 134567777888 777766532210100 0
Q ss_pred CCchhHHHHHHHHHHHhCCcEEEeCCCCHHHHHHHHHcCCCcEEEech
Q 025135 156 GTEDEEAQLLRTWRRSYQGTFICSGGFTRELGIQALAEDGADLVAYGR 203 (257)
Q Consensus 156 ~~~~~~~~~~~~ir~~~~~pvi~~G~it~~~a~~~l~~g~~D~V~igR 203 (257)
.+.. .+..+.++++.+++||++.|..|+++|..+++.| +|+|.+|+
T Consensus 195 ~~~~-~~~~i~~l~~~~~~pvi~ggi~t~e~a~~~~~~G-ad~i~vg~ 240 (393)
T 2qr6_A 195 NTGG-EALNLKEFIGSLDVPVIAGGVNDYTTALHMMRTG-AVGIIVGG 240 (393)
T ss_dssp CC------CHHHHHHHCSSCEEEECCCSHHHHHHHHTTT-CSEEEESC
T ss_pred CCcc-cHHHHHHHHHhcCCCEEECCcCCHHHHHHHHHcC-CCEEEECC
Confidence 0111 2334677888899999984444999999999877 99999987
No 284
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=96.48 E-value=0.058 Score=45.64 Aligned_cols=148 Identities=15% Similarity=0.185 Sum_probs=86.5
Q ss_pred CCCCCChhhHHHHHHH-------------HHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhH
Q 025135 11 NPQALQTSEIPEVIDQ-------------YRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRF 77 (257)
Q Consensus 11 ~p~~lt~~eI~~ii~~-------------f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~ 77 (257)
-||..|.++..+|++. .-+.+..+.+.++|.||||+..
T Consensus 52 SpR~V~~~~A~~i~~~~~~~~~~v~v~v~~~ei~~~i~~~~ld~vQLHG~E----------------------------- 102 (228)
T 4aaj_A 52 SKRRIPLEKAREIIENSAIPVFLVSTMVGFSEWAMAIERTGAQYIQVHSNA----------------------------- 102 (228)
T ss_dssp STTBCCHHHHHHHHHHCSSCEEEEECCCCHHHHHHHHHHHTCSEEEECSCC-----------------------------
T ss_pred CCCCCCHHHHHHHHHhhCCCCEEEeccCchHHHHHHHHhccchheeccccc-----------------------------
Confidence 4788888888888753 1244556678899999999643
Q ss_pred HHHHHHHHHHHhCCCeE--EEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCC
Q 025135 78 LMQLVREVIVAIGADRV--GVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRP 155 (257)
Q Consensus 78 ~~eiv~aiR~~vg~~~v--~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~ 155 (257)
..+-++.+|+..+- +| .+++.... ..+.++...+...+.... +|++-+..+. +.
T Consensus 103 ~~~~~~~l~~~~~~-~viKa~~v~~~~-------~~~~~~~~~~~~~~~~~~------~d~~LlDs~G--Gt-------- 158 (228)
T 4aaj_A 103 LPQTIDTLKKEFGV-FVMKAFRVPTIS-------KNPEEDANRLLSEISRYN------ADMVLLDTGA--GS-------- 158 (228)
T ss_dssp CHHHHHHHHHHHCC-EEEEEEECCSSC-------SCHHHHHHHHHHHHHHSC------CSEEEEEC--------------
T ss_pred CHHHHHHHhhccCc-eEEEEEEecccc-------cchhhhHHHHHHHHhccC------CCEEccCCCC--CC--------
Confidence 11345667777764 33 35554211 123444455555565555 6666443321 11
Q ss_pred CCchhHHHHHHHHHHHhCCcEEEeCCCCHHHHHHHHHcCCCcEEEechHH----hhCchHHHH
Q 025135 156 GTEDEEAQLLRTWRRSYQGTFICSGGFTRELGIQALAEDGADLVAYGRLF----ISNPDLVLR 214 (257)
Q Consensus 156 ~~~~~~~~~~~~ir~~~~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~----iadP~l~~k 214 (257)
+....|..++.+.. +.|+++.||++++...++|+.-...+|=+..+. +.||+.+++
T Consensus 159 -G~~fDW~~~~~~~~--~~p~iLAGGL~peNV~~Ai~~~~P~gVDVsSGVEs~G~KD~~KI~~ 218 (228)
T 4aaj_A 159 -GKLHDLRVSSLVAR--KIPVIVAGGLNAENVEEVIKVVKPYGVDVSSGVEKYGIKDPKLVEE 218 (228)
T ss_dssp ----CCCHHHHHHHH--HSCEEEESSCCTTTHHHHHHHHCCSEEEESGGGEETTEECHHHHHH
T ss_pred -cCcCChHHHHHhhh--cCCeEEECCCCHHHHHHHHHHhCCCEEEeCCCCCCCCCcCHHHHHH
Confidence 12222344444443 469999999999988888876556666665553 455555444
No 285
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=96.48 E-value=0.029 Score=49.59 Aligned_cols=148 Identities=10% Similarity=0.103 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCc-hhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCC
Q 025135 26 QYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGS-IENRCRFLMQLVREVIVAIGAD-RVGVRMSPAID 103 (257)
Q Consensus 26 ~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs-~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~ 103 (257)
+..+.+++.+++|.+||.|-.+-+ .+|...-+|. +.. ..-..+.|++++++ +.+ .|..|.....
T Consensus 105 ~v~~~v~~l~~aGaagv~iED~~~-----------~krcGh~~gk~l~~-~~e~~~rI~Aa~~A-~~~~~I~ARtda~~- 170 (305)
T 3ih1_A 105 NVARTAVEMVEAKVAAVQIEDQQL-----------PKKCGHLNGKKLVT-TEELVQKIKAIKEV-APSLYIVARTDARG- 170 (305)
T ss_dssp HHHHHHHHHHHTTCSEEEEECBCS-----------SCCTTCTTCCCBCC-HHHHHHHHHHHHHH-CTTSEEEEEECCHH-
T ss_pred HHHHHHHHHHHhCCcEEEECCCCC-----------CcccCCCCCCcccC-HHHHHHHHHHHHHc-CCCeEEEEeecccc-
Confidence 345667788899999999987641 2344333332 222 22345667777777 555 5666764310
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEe---C
Q 025135 104 HLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICS---G 180 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~---G 180 (257)
....+++++=++.++++| .|.|-+... + ..+.+++|.+.+++|++++ +
T Consensus 171 ------~~g~~~ai~Ra~ay~eAG------AD~i~~e~~---------------~--~~~~~~~i~~~~~~P~~~n~~~~ 221 (305)
T 3ih1_A 171 ------VEGLDEAIERANAYVKAG------ADAIFPEAL---------------Q--SEEEFRLFNSKVNAPLLANMTEF 221 (305)
T ss_dssp ------HHCHHHHHHHHHHHHHHT------CSEEEETTC---------------C--SHHHHHHHHHHSCSCBEEECCTT
T ss_pred ------ccCHHHHHHHHHHHHHcC------CCEEEEcCC---------------C--CHHHHHHHHHHcCCCEEEeecCC
Confidence 013678888999999999 776655331 1 1345677888999998754 3
Q ss_pred CCCHH-HHHHHHHcCCCcEEEechHHhh--Cc---hHHHHHHc
Q 025135 181 GFTRE-LGIQALAEDGADLVAYGRLFIS--NP---DLVLRFKL 217 (257)
Q Consensus 181 ~it~~-~a~~~l~~g~~D~V~igR~~ia--dP---~l~~k~~~ 217 (257)
+-+|. ..+++-+-| +..|.++-.++. .. +..+.+++
T Consensus 222 g~tp~~~~~eL~~lG-v~~v~~~~~~~raa~~a~~~~~~~i~~ 263 (305)
T 3ih1_A 222 GKTPYYSAEEFANMG-FQMVIYPVTSLRVAAKAYENVFTLIKE 263 (305)
T ss_dssp SSSCCCCHHHHHHTT-CSEEEECSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHcC-CCEEEEchHHHHHHHHHHHHHHHHHHh
Confidence 32321 234444445 999999976653 22 34455554
No 286
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=96.45 E-value=0.12 Score=45.37 Aligned_cols=121 Identities=14% Similarity=0.166 Sum_probs=76.9
Q ss_pred HHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCCCC
Q 025135 27 YRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAIDHL 105 (257)
Q Consensus 27 f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~~~ 105 (257)
+.+-+....+.|.|||-+.+..|- |. -=|.+.|.+++.. ++++++.. +|.+=++.
T Consensus 35 l~~lv~~li~~Gv~gl~v~GtTGE----~~-----------~Ls~eEr~~vi~~----~~~~~~grvpViaGvg~----- 90 (306)
T 1o5k_A 35 YERLVRYQLENGVNALIVLGTTGE----SP-----------TVNEDEREKLVSR----TLEIVDGKIPVIVGAGT----- 90 (306)
T ss_dssp HHHHHHHHHHTTCCEEEESSGGGT----GG-----------GCCHHHHHHHHHH----HHHHHTTSSCEEEECCC-----
T ss_pred HHHHHHHHHHcCCCEEEeCccccc----hh-----------hCCHHHHHHHHHH----HHHHhCCCCeEEEcCCC-----
Confidence 344444556789999998876542 11 1134566655444 44444433 66554443
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEE------e
Q 025135 106 DATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFIC------S 179 (257)
Q Consensus 106 ~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~------~ 179 (257)
.+.++++++++..++.| +|.+-+..|.|..+ .........+.|.+++++||+. +
T Consensus 91 -----~st~~ai~la~~A~~~G------adavlv~~P~y~~~---------s~~~l~~~f~~va~a~~lPiilYn~P~~t 150 (306)
T 1o5k_A 91 -----NSTEKTLKLVKQAEKLG------ANGVLVVTPYYNKP---------TQEGLYQHYKYISERTDLGIVVYNVPGRT 150 (306)
T ss_dssp -----SCHHHHHHHHHHHHHHT------CSEEEEECCCSSCC---------CHHHHHHHHHHHHTTCSSCEEEEECHHHH
T ss_pred -----ccHHHHHHHHHHHHhcC------CCEEEECCCCCCCC---------CHHHHHHHHHHHHHhCCCCEEEEeCcccc
Confidence 35788999999999999 88888777765432 1223334556777888899765 2
Q ss_pred CC-CCHHHHHHHH
Q 025135 180 GG-FTRELGIQAL 191 (257)
Q Consensus 180 G~-it~~~a~~~l 191 (257)
|- ++++...++.
T Consensus 151 g~~l~~~~~~~La 163 (306)
T 1o5k_A 151 GVNVLPETAARIA 163 (306)
T ss_dssp SCCCCHHHHHHHH
T ss_pred CcCCCHHHHHHHH
Confidence 32 4888888877
No 287
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=96.45 E-value=0.045 Score=46.22 Aligned_cols=135 Identities=19% Similarity=0.153 Sum_probs=73.9
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEE
Q 025135 19 EIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVR 97 (257)
Q Consensus 19 eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vr 97 (257)
||-..++.|+++ +.++|+|.|-+|+.. |. .-+...++.+++ .|.. .+...
T Consensus 75 DipnTv~~~~~~---~~~~gad~vtvh~~~--------------------G~-----~~l~~~~~~~~~-~g~~v~vLt~ 125 (228)
T 3m47_A 75 DIPETNEKICRA---TFKAGADAIIVHGFP--------------------GA-----DSVRACLNVAEE-MGREVFLLTE 125 (228)
T ss_dssp SCHHHHHHHHHH---HHHTTCSEEEEESTT--------------------CH-----HHHHHHHHHHHH-HTCEEEEECC
T ss_pred ccHhHHHHHHHH---HHhCCCCEEEEeccC--------------------CH-----HHHHHHHHHHHh-cCCCeEEEEe
Confidence 455666666654 456899999999654 21 224444555543 3432 22234
Q ss_pred EccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCC-cE
Q 025135 98 MSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQG-TF 176 (257)
Q Consensus 98 ls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~-pv 176 (257)
++.. +..+ .-.+....+++...+.| ++-+-++. .. ...++.+|+..+. -.
T Consensus 126 ~s~~-~~~~----~~~~~~~~~a~~a~~~G------~~GvV~~a---------------t~---~~e~~~ir~~~~~~~~ 176 (228)
T 3m47_A 126 MSHP-GAEM----FIQGAADEIARMGVDLG------VKNYVGPS---------------TR---PERLSRLREIIGQDSF 176 (228)
T ss_dssp CCSG-GGGT----THHHHHHHHHHHHHHTT------CCEEECCS---------------SC---HHHHHHHHHHHCSSSE
T ss_pred CCCc-cHHH----HHHHHHHHHHHHHHHhC------CcEEEECC---------------CC---hHHHHHHHHhcCCCCE
Confidence 4421 1110 11234566777778888 55544321 11 2345668888764 35
Q ss_pred EEeCCCCHH--HHHHHHHcCCCcEEEechHHhhCchHHH
Q 025135 177 ICSGGFTRE--LGIQALAEDGADLVAYGRLFISNPDLVL 213 (257)
Q Consensus 177 i~~G~it~~--~a~~~l~~g~~D~V~igR~~iadP~l~~ 213 (257)
+++.||.++ +. ++++.| +|++.+||+...-+|...
T Consensus 177 iv~PGI~~~g~~p-~~~~aG-ad~iVvGr~I~~a~dp~~ 213 (228)
T 3m47_A 177 LISPGVGAQGGDP-GETLRF-ADAIIVGRSIYLADNPAA 213 (228)
T ss_dssp EEECC----------CGGGT-CSEEEECHHHHTSSCHHH
T ss_pred EEecCcCcCCCCH-hHHHcC-CCEEEECHHHhCCCCHHH
Confidence 577777544 55 777777 999999999997555443
No 288
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=96.45 E-value=0.15 Score=45.11 Aligned_cols=149 Identities=12% Similarity=0.071 Sum_probs=90.0
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-
Q 025135 14 ALQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD- 92 (257)
Q Consensus 14 ~lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~- 92 (257)
++..+.++++++ ...++|.|||-+.+..|- |. -=|.+.|.+++..+++ +++..
T Consensus 40 ~iD~~~l~~lv~-------~li~~Gv~Gl~v~GtTGE----~~-----------~Ls~~Er~~v~~~~v~----~~~grv 93 (314)
T 3qze_A 40 RLDWDSLAKLVD-------FHLQEGTNAIVAVGTTGE----SA-----------TLDVEEHIQVIRRVVD----QVKGRI 93 (314)
T ss_dssp CBCHHHHHHHHH-------HHHHHTCCEEEESSGGGT----GG-----------GCCHHHHHHHHHHHHH----HHTTSS
T ss_pred CcCHHHHHHHHH-------HHHHcCCCEEEECccccC----hh-----------hCCHHHHHHHHHHHHH----HhCCCC
Confidence 344455555555 456799999998876642 11 1134666666554444 44333
Q ss_pred eEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh
Q 025135 93 RVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY 172 (257)
Q Consensus 93 ~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~ 172 (257)
+|.+=++. .+.++++++++..++.| +|.+-+..|.|..+ .........+.|.+++
T Consensus 94 pViaGvg~----------~st~eai~la~~A~~~G------adavlv~~P~y~~~---------s~~~l~~~f~~va~a~ 148 (314)
T 3qze_A 94 PVIAGTGA----------NSTREAVALTEAAKSGG------ADACLLVTPYYNKP---------TQEGMYQHFRHIAEAV 148 (314)
T ss_dssp CEEEECCC----------SSHHHHHHHHHHHHHTT------CSEEEEECCCSSCC---------CHHHHHHHHHHHHHHS
T ss_pred cEEEeCCC----------cCHHHHHHHHHHHHHcC------CCEEEEcCCCCCCC---------CHHHHHHHHHHHHHhc
Confidence 66654442 35788999999999999 88888777766432 1223345567788888
Q ss_pred CCcEEEe------CC-CCHHHHHHHHHcCCCcEEEechHHhhCchHHHHHH
Q 025135 173 QGTFICS------GG-FTRELGIQALAEDGADLVAYGRLFISNPDLVLRFK 216 (257)
Q Consensus 173 ~~pvi~~------G~-it~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~ 216 (257)
++||+.- |. ++++...++.+... +|++= -.-.|.....+++
T Consensus 149 ~lPiilYn~P~~tg~~l~~~~~~~La~~pn--IvgiK-dssgd~~~~~~~~ 196 (314)
T 3qze_A 149 AIPQILYNVPGRTSCDMLPETVERLSKVPN--IIGIK-EATGDLQRAKEVI 196 (314)
T ss_dssp CSCEEEEECHHHHSCCCCHHHHHHHHTSTT--EEEEE-ECSCCHHHHHHHH
T ss_pred CCCEEEEeCccccCCCCCHHHHHHHhcCCC--EEEEE-cCCCCHHHHHHHH
Confidence 9997652 33 48888888775433 33331 1122444555554
No 289
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=96.43 E-value=0.15 Score=44.73 Aligned_cols=149 Identities=13% Similarity=0.111 Sum_probs=90.3
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-
Q 025135 14 ALQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD- 92 (257)
Q Consensus 14 ~lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~- 92 (257)
.+..+.++++++ ...+.|.|||-+.+..|-. . -=|.+.|.+++ +.++++++..
T Consensus 32 ~iD~~~l~~lv~-------~li~~Gv~gi~v~GttGE~----~-----------~Lt~~Er~~v~----~~~~~~~~grv 85 (304)
T 3l21_A 32 SLDTATAARLAN-------HLVDQGCDGLVVSGTTGES----P-----------TTTDGEKIELL----RAVLEAVGDRA 85 (304)
T ss_dssp CBCHHHHHHHHH-------HHHHTTCSEEEESSTTTTG----G-----------GSCHHHHHHHH----HHHHHHHTTTS
T ss_pred CcCHHHHHHHHH-------HHHHcCCCEEEeCccccch----h-----------hCCHHHHHHHH----HHHHHHhCCCC
Confidence 344444555544 4567899999988766421 1 01346666554 4444555443
Q ss_pred eEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh
Q 025135 93 RVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY 172 (257)
Q Consensus 93 ~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~ 172 (257)
+|.+=++. .+.++++++++..++.| +|.+-+..|.|..+ .........+.|.+++
T Consensus 86 pviaGvg~----------~~t~~ai~la~~a~~~G------adavlv~~P~y~~~---------s~~~l~~~f~~va~a~ 140 (304)
T 3l21_A 86 RVIAGAGT----------YDTAHSIRLAKACAAEG------AHGLLVVTPYYSKP---------PQRGLQAHFTAVADAT 140 (304)
T ss_dssp EEEEECCC----------SCHHHHHHHHHHHHHHT------CSEEEEECCCSSCC---------CHHHHHHHHHHHHTSC
T ss_pred eEEEeCCC----------CCHHHHHHHHHHHHHcC------CCEEEECCCCCCCC---------CHHHHHHHHHHHHHhc
Confidence 66654442 35788999999999999 88888877765432 1223344557788888
Q ss_pred CCcEEEe------CC-CCHHHHHHHHHcCCCcEEEechHHhhCchHHHHHH
Q 025135 173 QGTFICS------GG-FTRELGIQALAEDGADLVAYGRLFISNPDLVLRFK 216 (257)
Q Consensus 173 ~~pvi~~------G~-it~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~ 216 (257)
++||+.- |. ++++...++.+...+-.|=-+- .|.....++.
T Consensus 141 ~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiKdss---gd~~~~~~~~ 188 (304)
T 3l21_A 141 ELPMLLYDIPGRSAVPIEPDTIRALASHPNIVGVXDAK---ADLHSGAQIM 188 (304)
T ss_dssp SSCEEEEECHHHHSSCCCHHHHHHHHTSTTEEEEEECS---CCHHHHHHHH
T ss_pred CCCEEEEeCccccCCCCCHHHHHHHhcCCCEEEEECCC---CCHHHHHHHh
Confidence 9997653 33 4888888877544333332232 2445555554
No 290
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=96.43 E-value=0.092 Score=46.00 Aligned_cols=130 Identities=18% Similarity=0.167 Sum_probs=81.6
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-
Q 025135 14 ALQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD- 92 (257)
Q Consensus 14 ~lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~- 92 (257)
++..+.++++++ ...+.|.|||-+.+..|-. . -=|.+.|.+++.. ++++++..
T Consensus 24 ~iD~~~l~~lv~-------~li~~Gv~gl~~~GttGE~----~-----------~Ls~~Er~~v~~~----~~~~~~grv 77 (297)
T 3flu_A 24 SIHYEQLRDLID-------WHIENGTDGIVAVGTTGES----A-----------TLSVEEHTAVIEA----VVKHVAKRV 77 (297)
T ss_dssp CBCHHHHHHHHH-------HHHHTTCCEEEESSTTTTG----G-----------GSCHHHHHHHHHH----HHHHHTTSS
T ss_pred CcCHHHHHHHHH-------HHHHcCCCEEEeCccccCc----c-----------cCCHHHHHHHHHH----HHHHhCCCC
Confidence 344455555554 4567999999988766421 1 0134566655444 44444333
Q ss_pred eEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh
Q 025135 93 RVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY 172 (257)
Q Consensus 93 ~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~ 172 (257)
+|.+=++. .+.++++++++..++.| +|.+-+..|.|..+ .........+.|.+++
T Consensus 78 pviaGvg~----------~~t~~ai~la~~a~~~G------adavlv~~P~y~~~---------~~~~l~~~f~~va~a~ 132 (297)
T 3flu_A 78 PVIAGTGA----------NNTVEAIALSQAAEKAG------ADYTLSVVPYYNKP---------SQEGIYQHFKTIAEAT 132 (297)
T ss_dssp CEEEECCC----------SSHHHHHHHHHHHHHTT------CSEEEEECCCSSCC---------CHHHHHHHHHHHHHHC
T ss_pred cEEEeCCC----------cCHHHHHHHHHHHHHcC------CCEEEECCCCCCCC---------CHHHHHHHHHHHHHhC
Confidence 66654442 35788999999999999 88888777765432 1223344557788888
Q ss_pred CCcEEEe------CC-CCHHHHHHHHHcC
Q 025135 173 QGTFICS------GG-FTRELGIQALAED 194 (257)
Q Consensus 173 ~~pvi~~------G~-it~~~a~~~l~~g 194 (257)
++||+.- |. ++++...++.+..
T Consensus 133 ~lPiilYn~P~~tg~~l~~~~~~~La~~p 161 (297)
T 3flu_A 133 SIPMIIYNVPGRTVVSMTNDTILRLAEIP 161 (297)
T ss_dssp CSCEEEEECHHHHSSCCCHHHHHHHTTST
T ss_pred CCCEEEEECCchhccCCCHHHHHHHHcCC
Confidence 9997652 32 4788877776433
No 291
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=96.42 E-value=0.017 Score=50.97 Aligned_cols=110 Identities=18% Similarity=0.118 Sum_probs=68.4
Q ss_pred CCcCCCCCCc--hhhHhhHH---HHHHHHHHHHhCCC-eEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCce
Q 025135 61 NDRTDEYGGS--IENRCRFL---MQLVREVIVAIGAD-RVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKL 134 (257)
Q Consensus 61 N~R~D~yGGs--~enR~r~~---~eiv~aiR~~vg~~-~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~v 134 (257)
|+|...+..- ..|...+. .+-++++|+..++. +|.+-.. +.++..+ ..+.| +
T Consensus 161 ~hr~~l~d~vlik~~Hi~~~g~~~~ai~~~r~~~~~~~~i~vev~------------tlee~~~----A~~aG------a 218 (299)
T 2jbm_A 161 SHRYDLGGLVMVKDNHVVAAGGVEKAVRAARQAADFALKVEVECS------------SLQEAVQ----AAEAG------A 218 (299)
T ss_dssp CCCCSTTSSEEECHHHHHHHTSHHHHHHHHHHHHTTTSCEEEEES------------SHHHHHH----HHHTT------C
T ss_pred ceecCccceEEecccHHHHcCCHHHHHHHHHHhCCcCCeEEEecC------------CHHHHHH----HHHcC------C
Confidence 5666665553 23444444 67788999998864 5665332 3444332 33578 8
Q ss_pred eEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh-CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhh
Q 025135 135 TYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY-QGTFICSGGFTRELGIQALAEDGADLVAYGRLFIS 207 (257)
Q Consensus 135 d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~ia 207 (257)
|+|-+... .........+.++... .+||.++||||++.+.++++.| +|.|++|.....
T Consensus 219 D~I~ld~~--------------~~~~l~~~v~~l~~~~~~~~I~ASGGIt~~ni~~~~~aG-aD~i~vGs~i~~ 277 (299)
T 2jbm_A 219 DLVLLDNF--------------KPEELHPTATVLKAQFPSVAVEASGGITLDNLPQFCGPH-IDVISMGMLTQA 277 (299)
T ss_dssp SEEEEESC--------------CHHHHHHHHHHHHHHCTTSEEEEESSCCTTTHHHHCCTT-CCEEECTHHHHS
T ss_pred CEEEECCC--------------CHHHHHHHHHHhhccCCCeeEEEECCCCHHHHHHHHHCC-CCEEEEChhhcC
Confidence 88876541 1111112222333322 2789999999999999999887 999999985543
No 292
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=96.42 E-value=0.078 Score=46.29 Aligned_cols=129 Identities=12% Similarity=0.177 Sum_probs=81.0
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-
Q 025135 14 ALQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD- 92 (257)
Q Consensus 14 ~lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~- 92 (257)
++..+.++++++ ...+.|.|||-+.+..|-..+ =|.+.|.++ ++.++++++..
T Consensus 18 ~iD~~~l~~lv~-------~li~~Gv~gl~~~GttGE~~~---------------Ls~~Er~~v----~~~~~~~~~gr~ 71 (291)
T 3tak_A 18 GVDWKSLEKLVE-------WHIEQGTNSIVAVGTTGEAST---------------LSMEEHTQV----IKEIIRVANKRI 71 (291)
T ss_dssp CBCHHHHHHHHH-------HHHHHTCCEEEESSTTTTGGG---------------SCHHHHHHH----HHHHHHHHTTSS
T ss_pred CcCHHHHHHHHH-------HHHHCCCCEEEECcccccccc---------------CCHHHHHHH----HHHHHHHhCCCC
Confidence 455555555555 446789999998876642110 134566555 55555555443
Q ss_pred eEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh
Q 025135 93 RVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY 172 (257)
Q Consensus 93 ~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~ 172 (257)
+|.+=++. .+..+++++++..++.| +|.+-+..|.|..+ .........+.|.+++
T Consensus 72 pviaGvg~----------~~t~~ai~la~~a~~~G------adavlv~~P~y~~~---------~~~~l~~~f~~ia~a~ 126 (291)
T 3tak_A 72 PIIAGTGA----------NSTREAIELTKAAKDLG------ADAALLVTPYYNKP---------TQEGLYQHYKAIAEAV 126 (291)
T ss_dssp CEEEECCC----------SSHHHHHHHHHHHHHHT------CSEEEEECCCSSCC---------CHHHHHHHHHHHHHHC
T ss_pred eEEEeCCC----------CCHHHHHHHHHHHHhcC------CCEEEEcCCCCCCC---------CHHHHHHHHHHHHHhc
Confidence 66654442 35788999999999999 88887777765432 1223344556788888
Q ss_pred CCcEEEe------CC-CCHHHHHHHHHc
Q 025135 173 QGTFICS------GG-FTRELGIQALAE 193 (257)
Q Consensus 173 ~~pvi~~------G~-it~~~a~~~l~~ 193 (257)
++||+.- |. ++++...++.+.
T Consensus 127 ~lPiilYn~P~~tg~~l~~~~~~~La~~ 154 (291)
T 3tak_A 127 ELPLILYNVPGRTGVDLSNDTAVRLAEI 154 (291)
T ss_dssp CSCEEEEECHHHHSCCCCHHHHHHHTTS
T ss_pred CCCEEEEecccccCCCCCHHHHHHHHcC
Confidence 8897642 32 478877777643
No 293
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=96.41 E-value=0.18 Score=44.01 Aligned_cols=149 Identities=15% Similarity=0.137 Sum_probs=89.3
Q ss_pred CChhhHHHHHHHHHHHHHHHHH-cCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-
Q 025135 15 LQTSEIPEVIDQYRQAALNAIQ-AGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD- 92 (257)
Q Consensus 15 lt~~eI~~ii~~f~~AA~~a~~-aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~- 92 (257)
+..+.++++++ ...+ .|.|||-+.+..|- |. -=|.+.|.+++ +.++++++..
T Consensus 21 iD~~~l~~lv~-------~li~~~Gv~gl~~~GttGE----~~-----------~Ls~~Er~~v~----~~~~~~~~grv 74 (293)
T 1f6k_A 21 INEKGLRQIIR-------HNIDKMKVDGLYVGGSTGE----NF-----------MLSTEEKKEIF----RIAKDEAKDQI 74 (293)
T ss_dssp BCHHHHHHHHH-------HHHHTSCCSEEEESSGGGT----GG-----------GSCHHHHHHHH----HHHHHHHTTSS
T ss_pred cCHHHHHHHHH-------HHHhhCCCcEEEeCccccc----hh-----------hCCHHHHHHHH----HHHHHHhCCCC
Confidence 44444545444 5567 99999998876542 11 11345666554 4444555443
Q ss_pred eEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh
Q 025135 93 RVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY 172 (257)
Q Consensus 93 ~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~ 172 (257)
+|.+=++. .+.++++++++..++.| +|.+-+..|.|..+ .........+.|.+++
T Consensus 75 pviaGvg~----------~~t~~ai~la~~a~~~G------adavlv~~P~y~~~---------~~~~l~~~f~~va~a~ 129 (293)
T 1f6k_A 75 ALIAQVGS----------VNLKEAVELGKYATELG------YDCLSAVTPFYYKF---------SFPEIKHYYDTIIAET 129 (293)
T ss_dssp EEEEECCC----------SCHHHHHHHHHHHHHHT------CSEEEEECCCSSCC---------CHHHHHHHHHHHHHHH
T ss_pred eEEEecCC----------CCHHHHHHHHHHHHhcC------CCEEEECCCCCCCC---------CHHHHHHHHHHHHHhC
Confidence 66654443 35788999999999999 88888777765432 1223344557788888
Q ss_pred CCcEEE-e-----CC-CCHHHHHHHHHcCCCcEEEechHHhhCchHHHHHHc
Q 025135 173 QGTFIC-S-----GG-FTRELGIQALAEDGADLVAYGRLFISNPDLVLRFKL 217 (257)
Q Consensus 173 ~~pvi~-~-----G~-it~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~ 217 (257)
+.||+. + |- ++++...++.+... +|++ .-...|.....++++
T Consensus 130 ~lPiilYn~P~~tg~~l~~~~~~~La~~pn--Ivgi-K~s~gd~~~~~~~~~ 178 (293)
T 1f6k_A 130 GSNMIVYSIPFLTGVNMGIEQFGELYKNPK--VLGV-KFTAGDFYLLERLKK 178 (293)
T ss_dssp CCCEEEEECHHHHCCCCCHHHHHHHHTSTT--EEEE-EECSCCHHHHHHHHH
T ss_pred CCCEEEEECccccCcCCCHHHHHHHhcCCC--EEEE-EECCCCHHHHHHHHH
Confidence 999765 2 32 48888888875433 3333 111234444555543
No 294
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=96.40 E-value=0.15 Score=44.74 Aligned_cols=128 Identities=11% Similarity=0.112 Sum_probs=80.4
Q ss_pred CChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-e
Q 025135 15 LQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-R 93 (257)
Q Consensus 15 lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~ 93 (257)
+..+.++++++ ...+.|.|||-+.+..|- |. -=|.+.|.+++. .++++++.. +
T Consensus 34 iD~~~l~~lv~-------~li~~Gv~gl~v~GttGE----~~-----------~Ls~~Er~~v~~----~~~~~~~grvp 87 (304)
T 3cpr_A 34 IDIAAGREVAA-------YLVDKGLDSLVLAGTTGE----SP-----------TTTAAEKLELLK----AVREEVGDRAK 87 (304)
T ss_dssp BCHHHHHHHHH-------HHHHTTCCEEEESSTTTT----TT-----------TSCHHHHHHHHH----HHHHHHTTTSE
T ss_pred cCHHHHHHHHH-------HHHHcCCCEEEECccccC----hh-----------hCCHHHHHHHHH----HHHHHhCCCCc
Confidence 44444555544 456789999998876531 11 113456665544 444445433 6
Q ss_pred EEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhC
Q 025135 94 VGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQ 173 (257)
Q Consensus 94 v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~ 173 (257)
|.+=++. .+.++++++++..++.| +|.+-+..|.|..+ .........+.|.++.+
T Consensus 88 viaGvg~----------~st~~ai~la~~A~~~G------adavlv~~P~y~~~---------~~~~l~~~f~~ia~a~~ 142 (304)
T 3cpr_A 88 LIAGVGT----------NNTRTSVELAEAAASAG------ADGLLVVTPYYSKP---------SQEGLLAHFGAIAAATE 142 (304)
T ss_dssp EEEECCC----------SCHHHHHHHHHHHHHTT------CSEEEEECCCSSCC---------CHHHHHHHHHHHHHHCC
T ss_pred EEecCCC----------CCHHHHHHHHHHHHhcC------CCEEEECCCCCCCC---------CHHHHHHHHHHHHHhcC
Confidence 6654443 35788999999999999 88888777765432 12233445567888889
Q ss_pred CcEEE-e-----CC-CCHHHHHHHHHc
Q 025135 174 GTFIC-S-----GG-FTRELGIQALAE 193 (257)
Q Consensus 174 ~pvi~-~-----G~-it~~~a~~~l~~ 193 (257)
+||+. + |. ++++...++.+.
T Consensus 143 lPiilYn~P~~tg~~l~~~~~~~La~~ 169 (304)
T 3cpr_A 143 VPICLYDIPGRSGIPIESDTMRRLSEL 169 (304)
T ss_dssp SCEEEEECHHHHSSCCCHHHHHHHTTS
T ss_pred CCEEEEeCccccCcCCCHHHHHHHHcC
Confidence 99765 2 32 488888777643
No 295
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=96.40 E-value=0.097 Score=44.94 Aligned_cols=44 Identities=14% Similarity=0.040 Sum_probs=37.2
Q ss_pred HHHHHHHHHHhCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhh
Q 025135 162 AQLLRTWRRSYQGTFICSGGF-TRELGIQALAEDGADLVAYGRLFIS 207 (257)
Q Consensus 162 ~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~ia 207 (257)
.+.++.+|+..+.||++++|| +++++.++. ++ +|.|.+|.+++.
T Consensus 188 ~~~v~~vr~~~~~Pv~vGfGIst~e~a~~~~-~~-ADGVIVGSAiVk 232 (252)
T 3tha_A 188 QDKVKEIRSFTNLPIFVGFGIQNNQDVKRMR-KV-ADGVIVGTSIVK 232 (252)
T ss_dssp HHHHHHHHTTCCSCEEEESSCCSHHHHHHHT-TT-SSEEEECHHHHH
T ss_pred HHHHHHHHHhcCCcEEEEcCcCCHHHHHHHH-hc-CCEEEECHHHHH
Confidence 346678888888999999999 899998875 45 999999999873
No 296
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=96.38 E-value=0.15 Score=44.71 Aligned_cols=143 Identities=12% Similarity=0.088 Sum_probs=87.9
Q ss_pred HHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCC-C-eEEEEEccCCCC
Q 025135 27 YRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGA-D-RVGVRMSPAIDH 104 (257)
Q Consensus 27 f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~-~-~v~vrls~~~~~ 104 (257)
+.+-+....+.|.|||-+.+..|- |. -=|.+.|.++ ++.++++++. . +|.+=++.
T Consensus 30 l~~lv~~li~~Gv~gl~v~GttGE----~~-----------~Ls~~Er~~v----~~~~~~~~~g~rvpviaGvg~---- 86 (301)
T 3m5v_A 30 YARLIKRQIENGIDAVVPVGTTGE----SA-----------TLTHEEHRTC----IEIAVETCKGTKVKVLAGAGS---- 86 (301)
T ss_dssp HHHHHHHHHHTTCCEEECSSTTTT----GG-----------GSCHHHHHHH----HHHHHHHHTTSSCEEEEECCC----
T ss_pred HHHHHHHHHHcCCCEEEECccccC----hh-----------hCCHHHHHHH----HHHHHHHhCCCCCeEEEeCCC----
Confidence 333444556799999998776542 11 0134566655 4455555544 3 66654442
Q ss_pred CCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEe-----
Q 025135 105 LDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICS----- 179 (257)
Q Consensus 105 ~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~----- 179 (257)
.+..+++++++..++.| +|.+-+..|.|..+ .........+.|.+++++||+.-
T Consensus 87 ------~~t~~ai~la~~a~~~G------adavlv~~P~y~~~---------s~~~l~~~f~~va~a~~lPiilYn~P~~ 145 (301)
T 3m5v_A 87 ------NATHEAVGLAKFAKEHG------ADGILSVAPYYNKP---------TQQGLYEHYKAIAQSVDIPVLLYNVPGR 145 (301)
T ss_dssp ------SSHHHHHHHHHHHHHTT------CSEEEEECCCSSCC---------CHHHHHHHHHHHHHHCSSCEEEEECHHH
T ss_pred ------CCHHHHHHHHHHHHHcC------CCEEEEcCCCCCCC---------CHHHHHHHHHHHHHhCCCCEEEEeCchh
Confidence 35788999999999999 88888877766432 12233455677888889997742
Q ss_pred -CC-CCHHHHHHHHHc-CCCcEEEechHHhhCchHHHHHH
Q 025135 180 -GG-FTRELGIQALAE-DGADLVAYGRLFISNPDLVLRFK 216 (257)
Q Consensus 180 -G~-it~~~a~~~l~~-g~~D~V~igR~~iadP~l~~k~~ 216 (257)
|. ++++...++.+. ..+-.|=-+- .|.....+++
T Consensus 146 tg~~l~~~~~~~La~~~pnivgiKdss---gd~~~~~~~~ 182 (301)
T 3m5v_A 146 TGCEISTDTIIKLFRDCENIYGVKEAS---GNIDKCVDLL 182 (301)
T ss_dssp HSCCCCHHHHHHHHHHCTTEEEEEECS---SCHHHHHHHH
T ss_pred hCcCCCHHHHHHHHhcCCCEEEEEeCC---CCHHHHHHHH
Confidence 33 488888888766 4443333332 2444444554
No 297
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=96.36 E-value=0.12 Score=45.22 Aligned_cols=143 Identities=12% Similarity=-0.011 Sum_probs=86.0
Q ss_pred HHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCCCCC
Q 025135 28 RQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAIDHLD 106 (257)
Q Consensus 28 ~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~~~~ 106 (257)
.+-+....+.|.|||-+.+..|- |. -=|.+.|.+++. .++++++.. +|.+=++.
T Consensus 24 ~~lv~~li~~Gv~gi~v~GttGE----~~-----------~Ls~~Er~~v~~----~~~~~~~grvpviaGvg~------ 78 (297)
T 2rfg_A 24 AGLVDWQIKHGAHGLVPVGTTGE----SP-----------TLTEEEHKRVVA----LVAEQAQGRVPVIAGAGS------ 78 (297)
T ss_dssp HHHHHHHHHTTCSEEECSSGGGT----GG-----------GSCHHHHHHHHH----HHHHHHTTSSCBEEECCC------
T ss_pred HHHHHHHHHcCCCEEEECccccc----hh-----------hCCHHHHHHHHH----HHHHHhCCCCeEEEccCC------
Confidence 33344556799999998776532 11 013456665544 444444433 66554442
Q ss_pred CCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEE-e-----C
Q 025135 107 ATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFIC-S-----G 180 (257)
Q Consensus 107 ~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~-~-----G 180 (257)
.+.++++++++..++.| +|.+-+..|.|..+ .........+.|.+++++||+. + |
T Consensus 79 ----~~t~~ai~la~~A~~~G------adavlv~~P~y~~~---------s~~~l~~~f~~va~a~~lPiilYn~P~~tg 139 (297)
T 2rfg_A 79 ----NNPVEAVRYAQHAQQAG------ADAVLCVAGYYNRP---------SQEGLYQHFKMVHDAIDIPIIVYNIPPRAV 139 (297)
T ss_dssp ----SSHHHHHHHHHHHHHHT------CSEEEECCCTTTCC---------CHHHHHHHHHHHHHHCSSCEEEEECHHHHS
T ss_pred ----CCHHHHHHHHHHHHhcC------CCEEEEcCCCCCCC---------CHHHHHHHHHHHHHhcCCCEEEEeCccccC
Confidence 35788999999999999 88888777765432 1233344556788888999765 2 3
Q ss_pred C-CCHHHHHHHHHcCCCcEEEechHHhhCchHHHHHHc
Q 025135 181 G-FTRELGIQALAEDGADLVAYGRLFISNPDLVLRFKL 217 (257)
Q Consensus 181 ~-it~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~ 217 (257)
. ++++...++.+... +|++ .-...|..-..++++
T Consensus 140 ~~l~~~~~~~La~~pn--Ivgi-Kds~gd~~~~~~~~~ 174 (297)
T 2rfg_A 140 VDIKPETMARLAALPR--IVGV-KDATTDLARISRERM 174 (297)
T ss_dssp CCCCHHHHHHHHTSTT--EEEE-EECSCCTTHHHHHHT
T ss_pred CCCCHHHHHHHHcCCC--EEEE-EeCCCCHHHHHHHHH
Confidence 2 48888888765333 3443 111234555556654
No 298
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=96.35 E-value=0.16 Score=44.82 Aligned_cols=149 Identities=16% Similarity=0.070 Sum_probs=88.7
Q ss_pred CChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-e
Q 025135 15 LQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-R 93 (257)
Q Consensus 15 lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~ 93 (257)
+..+.++++++ ...+.|.|||-+.+..|- |. -=|.+.|.+++. .++++++.. +
T Consensus 42 iD~~~l~~lv~-------~li~~Gv~Gi~v~GtTGE----~~-----------~Ls~~Er~~v~~----~~v~~~~grvp 95 (315)
T 3na8_A 42 LDLPALGRSIE-------RLIDGGVHAIAPLGSTGE----GA-----------YLSDPEWDEVVD----FTLKTVAHRVP 95 (315)
T ss_dssp BCHHHHHHHHH-------HHHHTTCSEEECSSGGGT----GG-----------GSCHHHHHHHHH----HHHHHHTTSSC
T ss_pred cCHHHHHHHHH-------HHHHcCCCEEEECccccC----hh-----------hCCHHHHHHHHH----HHHHHhCCCCc
Confidence 44444444444 456799999998876542 11 013456665544 444445433 6
Q ss_pred EEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhC
Q 025135 94 VGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQ 173 (257)
Q Consensus 94 v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~ 173 (257)
|.+=++. .+.++++++++..++.| +|.+-+..|.|..+ .........+.|.++++
T Consensus 96 ViaGvg~----------~~t~~ai~la~~A~~~G------adavlv~~P~y~~~---------s~~~l~~~f~~va~a~~ 150 (315)
T 3na8_A 96 TIVSVSD----------LTTAKTVRRAQFAESLG------AEAVMVLPISYWKL---------NEAEVFQHYRAVGEAIG 150 (315)
T ss_dssp BEEECCC----------SSHHHHHHHHHHHHHTT------CSEEEECCCCSSCC---------CHHHHHHHHHHHHHHCS
T ss_pred EEEecCC----------CCHHHHHHHHHHHHhcC------CCEEEECCCCCCCC---------CHHHHHHHHHHHHHhCC
Confidence 6654442 35788999999999999 88888877766432 12333455677888889
Q ss_pred CcEEEe------CC-CCHHHHHHH-HHcCCCcEEEechHHhhCchHHHHHHc
Q 025135 174 GTFICS------GG-FTRELGIQA-LAEDGADLVAYGRLFISNPDLVLRFKL 217 (257)
Q Consensus 174 ~pvi~~------G~-it~~~a~~~-l~~g~~D~V~igR~~iadP~l~~k~~~ 217 (257)
+||+.- |. ++++...++ -+...+-.|=-+- .|..-..++.+
T Consensus 151 lPiilYn~P~~tg~~l~~~~~~~L~a~~pnIvgiKdss---gd~~~~~~~~~ 199 (315)
T 3na8_A 151 VPVMLYNNPGTSGIDMSVELILRIVREVDNVTMVKEST---GDIQRMHKLRL 199 (315)
T ss_dssp SCEEEEECHHHHSCCCCHHHHHHHHHHSTTEEEEEECS---SCHHHHHHHHH
T ss_pred CcEEEEeCcchhCcCCCHHHHHHHHhcCCCEEEEECCC---CCHHHHHHHHH
Confidence 997652 32 478888887 4433333332222 24444445543
No 299
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=96.35 E-value=0.16 Score=45.51 Aligned_cols=120 Identities=18% Similarity=0.131 Sum_probs=76.4
Q ss_pred HHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCCCCC
Q 025135 28 RQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAIDHLD 106 (257)
Q Consensus 28 ~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~~~~ 106 (257)
.+-+....+.|.|||-+.+..|- |. -=|.+.|.++ ++.++++++.. +|.+=++.
T Consensus 55 ~~lv~~li~~Gv~Gl~v~GtTGE----~~-----------~Ls~eEr~~v----i~~~ve~~~grvpViaGvg~------ 109 (343)
T 2v9d_A 55 AALIDDLIKAGVDGLFFLGSGGE----FS-----------QLGAEERKAI----ARFAIDHVDRRVPVLIGTGG------ 109 (343)
T ss_dssp HHHHHHHHHTTCSCEEESSTTTT----GG-----------GSCHHHHHHH----HHHHHHHHTTSSCEEEECCS------
T ss_pred HHHHHHHHHcCCCEEEeCccccC----hh-----------hCCHHHHHHH----HHHHHHHhCCCCcEEEecCC------
Confidence 33344556789999998876532 11 1134556555 44445555433 66654443
Q ss_pred CCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEE-e-----C
Q 025135 107 ATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFIC-S-----G 180 (257)
Q Consensus 107 ~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~-~-----G 180 (257)
.+.++++++++..++.| +|.+-+..|.|..+ .........+.|.+++++||+. + |
T Consensus 110 ----~st~eai~la~~A~~~G------adavlv~~P~Y~~~---------s~~~l~~~f~~VA~a~~lPiilYn~P~~tg 170 (343)
T 2v9d_A 110 ----TNARETIELSQHAQQAG------ADGIVVINPYYWKV---------SEANLIRYFEQVADSVTLPVMLYNFPALTG 170 (343)
T ss_dssp ----SCHHHHHHHHHHHHHHT------CSEEEEECCSSSCC---------CHHHHHHHHHHHHHTCSSCEEEEECHHHHS
T ss_pred ----CCHHHHHHHHHHHHhcC------CCEEEECCCCCCCC---------CHHHHHHHHHHHHHhcCCCEEEEeCchhcC
Confidence 35788999999999999 88888777765432 1223344556788888899765 2 3
Q ss_pred C-CCHHHHHHHH
Q 025135 181 G-FTRELGIQAL 191 (257)
Q Consensus 181 ~-it~~~a~~~l 191 (257)
- ++++...++.
T Consensus 171 ~~l~~e~~~~La 182 (343)
T 2v9d_A 171 QDLTPALVKTLA 182 (343)
T ss_dssp SCCCHHHHHHHH
T ss_pred cCCCHHHHHHHH
Confidence 2 4888888877
No 300
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=96.31 E-value=0.11 Score=45.26 Aligned_cols=150 Identities=12% Similarity=0.078 Sum_probs=89.3
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-
Q 025135 14 ALQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD- 92 (257)
Q Consensus 14 ~lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~- 92 (257)
.+..+.++++++ +..+.|.|||-+.+..|- |. -=|.+.|.+++ +.++++++..
T Consensus 18 ~iD~~~l~~lv~-------~li~~Gv~gl~~~GttGE----~~-----------~Ls~~Er~~v~----~~~~~~~~gr~ 71 (292)
T 2ojp_A 18 NVCRASLKKLID-------YHVASGTSAIVSVGTTGE----SA-----------TLNHDEHADVV----MMTLDLADGRI 71 (292)
T ss_dssp CBCHHHHHHHHH-------HHHHHTCCEEEESSTTTT----GG-----------GSCHHHHHHHH----HHHHHHHTTSS
T ss_pred CcCHHHHHHHHH-------HHHHcCCCEEEECccccc----hh-----------hCCHHHHHHHH----HHHHHHhCCCC
Confidence 345555555555 446689999998876542 11 01345666554 4444445433
Q ss_pred eEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh
Q 025135 93 RVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY 172 (257)
Q Consensus 93 ~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~ 172 (257)
+|.+=++. .+..+++++++..++.| +|.+-+..|.|..+ .........+.|.+++
T Consensus 72 pviaGvg~----------~~t~~ai~la~~a~~~G------adavlv~~P~y~~~---------s~~~l~~~f~~ia~a~ 126 (292)
T 2ojp_A 72 PVIAGTGA----------NATAEAISLTQRFNDSG------IVGCLTVTPYYNRP---------SQEGLYQHFKAIAEHT 126 (292)
T ss_dssp CEEEECCC----------SSHHHHHHHHHHTTTSS------CSEEEEECCCSSCC---------CHHHHHHHHHHHHTTC
T ss_pred cEEEecCC----------ccHHHHHHHHHHHHhcC------CCEEEECCCCCCCC---------CHHHHHHHHHHHHHhc
Confidence 66554442 35788999999999999 88887777765432 1223344556788888
Q ss_pred CCcEEE------eCC-CCHHHHHHHHHcCCCcEEEechHHhhCchHHHHHHc
Q 025135 173 QGTFIC------SGG-FTRELGIQALAEDGADLVAYGRLFISNPDLVLRFKL 217 (257)
Q Consensus 173 ~~pvi~------~G~-it~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~ 217 (257)
++||+. +|. ++++...++.+.. -+|++ .-...|..-..++++
T Consensus 127 ~lPiilYn~P~~tg~~l~~~~~~~La~~p--nivgi-K~s~gd~~~~~~~~~ 175 (292)
T 2ojp_A 127 DLPQILYNVPSRTGCDLLPETVGRLAKVK--NIIGI-XEATGNLTRVNQIKE 175 (292)
T ss_dssp SSCEEEECCHHHHSCCCCHHHHHHHHTST--TEEEC--CCSCCTHHHHHHHT
T ss_pred CCCEEEEeCcchhccCCCHHHHHHHHcCC--CEEEE-eCCCCCHHHHHHHHH
Confidence 899775 232 4888888876432 24443 222234555556654
No 301
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=96.30 E-value=0.014 Score=49.06 Aligned_cols=81 Identities=15% Similarity=0.160 Sum_probs=64.2
Q ss_pred cHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHH
Q 025135 112 PLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQA 190 (257)
Q Consensus 112 ~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~ 190 (257)
+.+++..+++.|.+.| +..++++-. .+...+.++.+++.++..+|+.|.+ |+++++.+
T Consensus 23 ~~~~a~~~a~al~~gG------i~~iEvt~~---------------t~~a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~a 81 (217)
T 3lab_A 23 DLVHAIPMAKALVAGG------VHLLEVTLR---------------TEAGLAAISAIKKAVPEAIVGAGTVCTADDFQKA 81 (217)
T ss_dssp CGGGHHHHHHHHHHTT------CCEEEEETT---------------STTHHHHHHHHHHHCTTSEEEEECCCSHHHHHHH
T ss_pred CHHHHHHHHHHHHHcC------CCEEEEeCC---------------CccHHHHHHHHHHHCCCCeEeeccccCHHHHHHH
Confidence 3577899999999999 888888642 1223467788999988789999988 99999999
Q ss_pred HHcCCCcEEEechHHhhCchHHHHHHc
Q 025135 191 LAEDGADLVAYGRLFISNPDLVLRFKL 217 (257)
Q Consensus 191 l~~g~~D~V~igR~~iadP~l~~k~~~ 217 (257)
++.| ++||.. |. .+|++++..++
T Consensus 82 i~AG-A~fivs--P~-~~~evi~~~~~ 104 (217)
T 3lab_A 82 IDAG-AQFIVS--PG-LTPELIEKAKQ 104 (217)
T ss_dssp HHHT-CSEEEE--SS-CCHHHHHHHHH
T ss_pred HHcC-CCEEEe--CC-CcHHHHHHHHH
Confidence 9998 998865 22 58888876654
No 302
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=96.30 E-value=0.093 Score=46.45 Aligned_cols=121 Identities=12% Similarity=0.037 Sum_probs=77.3
Q ss_pred HHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCCCCC
Q 025135 28 RQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAIDHLD 106 (257)
Q Consensus 28 ~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~~~~ 106 (257)
.+-+....+.|.|||-+.+..|-. . -=|.+.|.+++..+ +++++.. +|.+=++.
T Consensus 46 ~~li~~li~~Gv~Gl~v~GtTGE~----~-----------~Ls~~Er~~v~~~~----v~~~~grvpViaGvg~------ 100 (315)
T 3si9_A 46 CNFVEWQITQGINGVSPVGTTGES----P-----------TLTHEEHKRIIELC----VEQVAKRVPVVAGAGS------ 100 (315)
T ss_dssp HHHHHHHHHTTCSEEECSSTTTTG----G-----------GSCHHHHHHHHHHH----HHHHTTSSCBEEECCC------
T ss_pred HHHHHHHHHcCCCEEEeCccccCc----c-----------ccCHHHHHHHHHHH----HHHhCCCCcEEEeCCC------
Confidence 333345567999999987765421 1 01346666555444 4444433 66654442
Q ss_pred CCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEe------C
Q 025135 107 ATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICS------G 180 (257)
Q Consensus 107 ~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~------G 180 (257)
.+..+++++++..++.| +|.+-+..|.|..+ .........+.|.+++++||+.- |
T Consensus 101 ----~st~~ai~la~~A~~~G------adavlv~~P~y~~~---------~~~~l~~~f~~va~a~~lPiilYn~P~~tg 161 (315)
T 3si9_A 101 ----NSTSEAVELAKHAEKAG------ADAVLVVTPYYNRP---------NQRGLYTHFSSIAKAISIPIIIYNIPSRSV 161 (315)
T ss_dssp ----SSHHHHHHHHHHHHHTT------CSEEEEECCCSSCC---------CHHHHHHHHHHHHHHCSSCEEEEECHHHHS
T ss_pred ----CCHHHHHHHHHHHHhcC------CCEEEECCCCCCCC---------CHHHHHHHHHHHHHcCCCCEEEEeCchhhC
Confidence 35788999999999999 88888777765432 12233455577888889997652 3
Q ss_pred C-CCHHHHHHHHH
Q 025135 181 G-FTRELGIQALA 192 (257)
Q Consensus 181 ~-it~~~a~~~l~ 192 (257)
. ++++...++.+
T Consensus 162 ~~l~~~~~~~La~ 174 (315)
T 3si9_A 162 IDMAVETMRDLCR 174 (315)
T ss_dssp CCCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHh
Confidence 2 47888888876
No 303
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=96.30 E-value=0.25 Score=43.16 Aligned_cols=130 Identities=12% Similarity=0.059 Sum_probs=82.7
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-
Q 025135 14 ALQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD- 92 (257)
Q Consensus 14 ~lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~- 92 (257)
.+..+.++++++ ...+.|.|||-+.+..|- |. -=|.+.|.++ ++.++++++..
T Consensus 20 ~iD~~~l~~lv~-------~li~~Gv~gl~~~GttGE----~~-----------~Ls~~Er~~v----~~~~~~~~~gr~ 73 (294)
T 3b4u_A 20 TVDIDAMIAHAR-------RCLSNGCDSVTLFGTTGE----GC-----------SVGSRERQAI----LSSFIAAGIAPS 73 (294)
T ss_dssp SBCHHHHHHHHH-------HHHHTTCSEEEESSTTTT----GG-----------GSCHHHHHHH----HHHHHHTTCCGG
T ss_pred CcCHHHHHHHHH-------HHHHcCCCEEEECccccC----hh-----------hCCHHHHHHH----HHHHHHHhCCCC
Confidence 344444555554 456789999998876532 11 1134555544 55555555443
Q ss_pred eEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCccc-CCCcCCCCCCCchhHHHHHHHHHHH
Q 025135 93 RVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTA-YGQTESGRPGTEDEEAQLLRTWRRS 171 (257)
Q Consensus 93 ~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ir~~ 171 (257)
+|.+=++. .+.++++++++..++.| +|.+-+..|.|.. + .........+.|.++
T Consensus 74 pviaGvg~----------~~t~~ai~la~~A~~~G------adavlv~~P~y~~~~---------s~~~l~~~f~~va~a 128 (294)
T 3b4u_A 74 RIVTGVLV----------DSIEDAADQSAEALNAG------ARNILLAPPSYFKNV---------SDDGLFAWFSAVFSK 128 (294)
T ss_dssp GEEEEECC----------SSHHHHHHHHHHHHHTT------CSEEEECCCCSSCSC---------CHHHHHHHHHHHHHH
T ss_pred cEEEeCCC----------ccHHHHHHHHHHHHhcC------CCEEEEcCCcCCCCC---------CHHHHHHHHHHHHHh
Confidence 66655553 35788999999999999 8888877776543 2 123334556778888
Q ss_pred h---CCcEEE-e-----CC-CCHHHHHHHH-HcC
Q 025135 172 Y---QGTFIC-S-----GG-FTRELGIQAL-AED 194 (257)
Q Consensus 172 ~---~~pvi~-~-----G~-it~~~a~~~l-~~g 194 (257)
+ ++||+. + |. ++++...++. +..
T Consensus 129 ~p~~~lPiilYn~P~~tg~~l~~~~~~~La~~~p 162 (294)
T 3b4u_A 129 IGKDARDILVYNIPSVTMVTLSVELVGRLKAAFP 162 (294)
T ss_dssp HCTTCCCEEEEECHHHHSCCCCHHHHHHHHHHCT
T ss_pred cCCCCCcEEEEECcchhCcCCCHHHHHHHHHhCC
Confidence 8 899765 2 32 4888888887 443
No 304
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=96.28 E-value=0.1 Score=45.55 Aligned_cols=146 Identities=8% Similarity=0.008 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCCC
Q 025135 26 QYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAIDH 104 (257)
Q Consensus 26 ~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~~ 104 (257)
.+.+-+....+.|.|||-+.+..|- |.+ =|.+.|.+++..+++ +++.. +|.+=++.
T Consensus 24 ~l~~lv~~li~~Gv~gl~v~GttGE----~~~-----------Lt~~Er~~v~~~~~~----~~~grvpviaGvg~---- 80 (292)
T 3daq_A 24 ALKAHVNFLLENNAQAIIVNGTTAE----SPT-----------LTTDEKELILKTVID----LVDKRVPVIAGTGT---- 80 (292)
T ss_dssp HHHHHHHHHHHTTCCEEEESSGGGT----GGG-----------SCHHHHHHHHHHHHH----HHTTSSCEEEECCC----
T ss_pred HHHHHHHHHHHcCCCEEEECccccc----ccc-----------CCHHHHHHHHHHHHH----HhCCCCcEEEeCCc----
Confidence 3444444556799999998876642 110 134666665554444 44433 66654442
Q ss_pred CCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEe-----
Q 025135 105 LDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICS----- 179 (257)
Q Consensus 105 ~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~----- 179 (257)
.+.++++++++..++.| +|.+-+..|.|..+ .........+.|.+++++||+.-
T Consensus 81 ------~~t~~ai~la~~a~~~G------adavlv~~P~y~~~---------~~~~l~~~f~~ia~a~~lPiilYn~P~~ 139 (292)
T 3daq_A 81 ------NDTEKSIQASIQAKALG------ADAIMLITPYYNKT---------NQRGLVKHFEAIADAVKLPVVLYNVPSR 139 (292)
T ss_dssp ------SCHHHHHHHHHHHHHHT------CSEEEEECCCSSCC---------CHHHHHHHHHHHHHHHCSCEEEEECHHH
T ss_pred ------ccHHHHHHHHHHHHHcC------CCEEEECCCCCCCC---------CHHHHHHHHHHHHHhCCCCEEEEecccc
Confidence 35788999999999999 88888877765432 12233455677888889997652
Q ss_pred -CC-CCHHHHHHHHHcCCCcEEEechHHhhCchHHHHHHcC
Q 025135 180 -GG-FTRELGIQALAEDGADLVAYGRLFISNPDLVLRFKLN 218 (257)
Q Consensus 180 -G~-it~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~g 218 (257)
|. ++++...++.+... +|++ .-.-.|.....++.+-
T Consensus 140 tg~~l~~~~~~~La~~pn--ivgi-K~ssgd~~~~~~~~~~ 177 (292)
T 3daq_A 140 TNMTIEPETVEILSQHPY--IVAL-KDATNDFEYLEEVKKR 177 (292)
T ss_dssp HSCCCCHHHHHHHHTSTT--EEEE-EECCCCHHHHHHHHTT
T ss_pred cCCCCCHHHHHHHhcCCC--EEEE-EeCCCCHHHHHHHHHH
Confidence 33 48888888775433 3433 1112355556666643
No 305
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=96.17 E-value=0.0095 Score=52.22 Aligned_cols=113 Identities=19% Similarity=0.147 Sum_probs=66.5
Q ss_pred cCCcCCCCCCc--hhhHhhH---HHHHHHHHHHHhCCC-eEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCc
Q 025135 60 INDRTDEYGGS--IENRCRF---LMQLVREVIVAIGAD-RVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAK 133 (257)
Q Consensus 60 ~N~R~D~yGGs--~enR~r~---~~eiv~aiR~~vg~~-~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~ 133 (257)
.|+|.+-+-+- .+|-..+ +.+.++++|+..+.. +|.|-.. +.+++.+ ..++|
T Consensus 156 ~nHR~gL~d~vlikdnHi~~~G~i~~av~~ar~~~~~~~~I~VEV~------------tleea~e----A~~aG------ 213 (285)
T 1o4u_A 156 DPHRLDLSGCVMIKDNHLKMYGSAERAVQEVRKIIPFTTKIEVEVE------------NLEDALR----AVEAG------ 213 (285)
T ss_dssp C--------CEEECHHHHHHHSSHHHHHHHHHTTSCTTSCEEEEES------------SHHHHHH----HHHTT------
T ss_pred CCccCCCcccEEEchhHHhhcCCHHHHHHHHHHhCCCCceEEEEeC------------CHHHHHH----HHHcC------
Confidence 36776666543 3455555 467788888888764 6777442 3444433 44578
Q ss_pred eeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHH-hCCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCc
Q 025135 134 LTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRS-YQGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNP 209 (257)
Q Consensus 134 vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~-~~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP 209 (257)
+|+|-+..- .........+.++.. ..+|+.++||||++.+.++.+.| +|+|++|.....-|
T Consensus 214 aD~I~LDn~--------------~~e~l~~av~~l~~~~~~v~ieASGGIt~eni~~~a~tG-VD~IsvGslt~sa~ 275 (285)
T 1o4u_A 214 ADIVMLDNL--------------SPEEVKDISRRIKDINPNVIVEVSGGITEENVSLYDFET-VDVISSSRLTLQEV 275 (285)
T ss_dssp CSEEEEESC--------------CHHHHHHHHHHHHHHCTTSEEEEEECCCTTTGGGGCCTT-CCEEEEGGGTSSCC
T ss_pred CCEEEECCC--------------CHHHHHHHHHHhhccCCCceEEEECCCCHHHHHHHHHcC-CCEEEEeHHHcCCC
Confidence 888876541 111222233334331 15789999999999999988776 99999998655433
No 306
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=96.16 E-value=0.25 Score=43.25 Aligned_cols=127 Identities=14% Similarity=0.060 Sum_probs=78.2
Q ss_pred HHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCC
Q 025135 28 RQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDA 107 (257)
Q Consensus 28 ~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~ 107 (257)
+.-|+.|.+.|+|-|++-.--|.|+++ ...+...+.+-|++|++++++. .+|+=....+-
T Consensus 103 ~~Ea~~Av~~GAdEIDmVinig~lk~~----------------~~g~~~~V~~eI~~v~~a~~~~--~lKVIlEt~~L-- 162 (297)
T 4eiv_A 103 SLEAVGALKDGADEIECLIDWRRMNEN----------------VADGESRIRLLVSEVKKVVGPK--TLKVVLSGGEL-- 162 (297)
T ss_dssp HHHHHHHHHTTCSEEEEECCTHHHHHC----------------HHHHHHHHHHHHHHHHHHHTTS--EEEEECCSSCC--
T ss_pred HHHHHHHHHcCCCEEEeeeeHHHHhcc----------------cCCcHHHHHHHHHHHHHHhcCC--ceEEEEecccC--
Confidence 345677889999999987666655541 2356778899999999999753 34443322221
Q ss_pred CCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHH-HHHHH---------------
Q 025135 108 TDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLR-TWRRS--------------- 171 (257)
Q Consensus 108 ~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ir~~--------------- 171 (257)
.+.+.....++...++| .|||-.+.+ +...+ ........+. .+++.
T Consensus 163 ---t~~e~i~~A~~ia~~AG------ADFVKTSTG-f~~~g--------AT~edV~lM~~~v~~~~~~~~~~~~~~~~~~ 224 (297)
T 4eiv_A 163 ---QGGDIISRAAVAALEGG------ADFLQTSSG-LGATH--------ATMFTVHLISIALREYMVRENERIRVEGINR 224 (297)
T ss_dssp ---CCHHHHHHHHHHHHHHT------CSEEECCCS-SSSCC--------CCHHHHHHHHHHHHHHHCC------------
T ss_pred ---CcHHHHHHHHHHHHHhC------CCEEEcCCC-CCCCC--------CCHHHHHHHHHHHHHHhcccccccccccccc
Confidence 12333456778788899 999987653 21111 1122222222 23322
Q ss_pred -----hCCcEEEe-CCC-CHHHHHHHHH
Q 025135 172 -----YQGTFICS-GGF-TRELGIQALA 192 (257)
Q Consensus 172 -----~~~pvi~~-G~i-t~~~a~~~l~ 192 (257)
-.+-|=++ ||| |.++|.++|+
T Consensus 225 ~~~tg~~vgvKAs~GGIrt~e~A~~~i~ 252 (297)
T 4eiv_A 225 EGAAVRCIGIKIEVGDVHMAETADFLMQ 252 (297)
T ss_dssp ------CCEEEEECTTCCHHHHHHHHHH
T ss_pred ccccCCceeEEecCCCCCCHHHHHHHHH
Confidence 12346677 999 8999999988
No 307
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=96.14 E-value=0.04 Score=48.17 Aligned_cols=113 Identities=14% Similarity=0.059 Sum_probs=71.6
Q ss_pred cCCcCCCCCCc--hhhHhhHH---HHHHHHHHHHhCCCeEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCce
Q 025135 60 INDRTDEYGGS--IENRCRFL---MQLVREVIVAIGADRVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKL 134 (257)
Q Consensus 60 ~N~R~D~yGGs--~enR~r~~---~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~v 134 (257)
.|+|.+-+.+- .+|-..+. .+.++++|+..+..+|.+-+. +.+++ +...++| +
T Consensus 158 ~nhR~gl~d~vlikdnHi~~ag~i~~av~~ar~~~~~~~I~Vev~------------t~eea----~eal~aG------a 215 (284)
T 1qpo_A 158 VNHRLGLGDAALIKDNHVAAAGSVVDALRAVRNAAPDLPCEVEVD------------SLEQL----DAVLPEK------P 215 (284)
T ss_dssp BCCCCSSSSSEEECHHHHHHHSSHHHHHHHHHHHCTTSCEEEEES------------SHHHH----HHHGGGC------C
T ss_pred ccccccchhhhcccHhHHHHcCCHHHHHHHHHHhCCCCCEEEEeC------------CHHHH----HHHHHcC------C
Confidence 46777766654 23444443 567888888876546666553 24443 3345578 7
Q ss_pred eEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHH-hCCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCc
Q 025135 135 TYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRS-YQGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNP 209 (257)
Q Consensus 135 d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~-~~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP 209 (257)
|+|-+... .........+.++.. ..+++.++||+|++...++.+.| +|+|++|....+-|
T Consensus 216 D~I~LDn~--------------~~~~~~~~v~~l~~~~~~v~ieaSGGIt~~~i~~~a~tG-VD~isvG~l~~~a~ 276 (284)
T 1qpo_A 216 ELILLDNF--------------AVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATYAETG-VDYLAVGALTHSVR 276 (284)
T ss_dssp SEEEEETC--------------CHHHHHHHHHHHHHHCTTCEEEEESSCCTTTHHHHHHTT-CSEEECGGGTSSBC
T ss_pred CEEEECCC--------------CHHHHHHHHHHhhccCCCeEEEEECCCCHHHHHHHHhcC-CCEEEECHHHcCCC
Confidence 87766541 112222334445442 14679999999999999999887 99999998554433
No 308
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.11 E-value=0.0062 Score=50.69 Aligned_cols=47 Identities=11% Similarity=0.020 Sum_probs=39.9
Q ss_pred HHHHHHHHHH--hCCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCc
Q 025135 162 AQLLRTWRRS--YQGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNP 209 (257)
Q Consensus 162 ~~~~~~ir~~--~~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP 209 (257)
+..++.+++. .++||++.||++++.+.++++.| ++.|++++++...+
T Consensus 131 ~~~l~~~~~~~~~~iPviaiGGI~~~nv~~~~~~G-a~gVav~s~i~~~~ 179 (210)
T 3ceu_A 131 AEELREAQKAKIIDSKVMALGGINEDNLLEIKDFG-FGGAVVLGDLWNKF 179 (210)
T ss_dssp HHHHHHHHHTTCSSTTEEEESSCCTTTHHHHHHTT-CSEEEESHHHHTTC
T ss_pred HHHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhC-CCEEEEhHHhHcCC
Confidence 3556777776 58999999999999999999877 99999999998643
No 309
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=96.09 E-value=0.01 Score=52.39 Aligned_cols=47 Identities=17% Similarity=0.167 Sum_probs=39.9
Q ss_pred HHHHHHHHHhCCcEE--EeCCC-CHHHHHHHHHcCCCcEEEechHHhhCch
Q 025135 163 QLLRTWRRSYQGTFI--CSGGF-TRELGIQALAEDGADLVAYGRLFISNPD 210 (257)
Q Consensus 163 ~~~~~ir~~~~~pvi--~~G~i-t~~~a~~~l~~g~~D~V~igR~~iadP~ 210 (257)
..++.+++.+++||+ +.||| +++++.++++.| +|.|.+|++++..++
T Consensus 197 ~ll~~i~~~~~iPVivvA~GGI~t~~dv~~~~~~G-AdgVlVGsai~~a~d 246 (297)
T 4adt_A 197 DLILLTRKLKRLPVVNFAAGGIATPADAAMCMQLG-MDGVFVGSGIFESEN 246 (297)
T ss_dssp HHHHHHHHHTSCSSEEEEESCCCSHHHHHHHHHTT-CSCEEESHHHHTSSC
T ss_pred HHHHHHHHhcCCCeEEEecCCCCCHHHHHHHHHcC-CCEEEEhHHHHcCCC
Confidence 455678888888976 88999 999999999997 999999999997443
No 310
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=96.09 E-value=0.17 Score=44.68 Aligned_cols=120 Identities=13% Similarity=0.106 Sum_probs=75.1
Q ss_pred HHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCCCCCC
Q 025135 29 QAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAIDHLDA 107 (257)
Q Consensus 29 ~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~~~~~ 107 (257)
+-+....+.|.|||-+.+..|- |. -=|.+.|.++ ++.++++++.. +|.+=++
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE----~~-----------~Ls~eEr~~v----i~~~~~~~~grvpViaGvg-------- 89 (314)
T 3d0c_A 37 DNVEFLLQNGIEVIVPNGNTGE----FY-----------ALTIEEAKQV----ATRVTELVNGRATVVAGIG-------- 89 (314)
T ss_dssp HHHHHHHHTTCSEECTTSGGGT----GG-----------GSCHHHHHHH----HHHHHHHHTTSSEEEEEEC--------
T ss_pred HHHHHHHHcCCCEEEECcccCC----hh-----------hCCHHHHHHH----HHHHHHHhCCCCeEEecCC--------
Confidence 3334556799999998766531 11 1134566655 44444555433 6665443
Q ss_pred CCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEE-e--CCCCH
Q 025135 108 TDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFIC-S--GGFTR 184 (257)
Q Consensus 108 ~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~-~--G~it~ 184 (257)
. +.++++++++..++.| +|.+-+..|.|..+ .........+.|.+++++||+. + |-+++
T Consensus 90 --~-st~~ai~la~~A~~~G------adavlv~~P~y~~~---------s~~~l~~~f~~va~a~~lPiilYn~tg~l~~ 151 (314)
T 3d0c_A 90 --Y-SVDTAIELGKSAIDSG------ADCVMIHQPVHPYI---------TDAGAVEYYRNIIEALDAPSIIYFKDAHLSD 151 (314)
T ss_dssp --S-SHHHHHHHHHHHHHTT------CSEEEECCCCCSCC---------CHHHHHHHHHHHHHHSSSCEEEEECCTTSCT
T ss_pred --c-CHHHHHHHHHHHHHcC------CCEEEECCCCCCCC---------CHHHHHHHHHHHHHhCCCCEEEEeCCCCcCH
Confidence 1 3677899999999999 88888877765432 1223344556788888999776 2 33577
Q ss_pred HHHHHHHHc
Q 025135 185 ELGIQALAE 193 (257)
Q Consensus 185 ~~a~~~l~~ 193 (257)
+...++.+.
T Consensus 152 ~~~~~La~~ 160 (314)
T 3d0c_A 152 DVIKELAPL 160 (314)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHHcC
Confidence 777777543
No 311
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=96.05 E-value=0.075 Score=49.46 Aligned_cols=123 Identities=15% Similarity=0.009 Sum_probs=81.9
Q ss_pred HHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCCCCCc
Q 025135 33 NAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDATDSDP 112 (257)
Q Consensus 33 ~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~~~ 112 (257)
.|+.+|.|+|-|.++. | ++ .-+.++++.+++ .|= .+.+-++ +
T Consensus 125 ea~~~GAD~ILLi~a~-------l-------~~----------~~l~~l~~~a~~-lgm-~~LvEvh------------~ 166 (452)
T 1pii_A 125 LARYYQADACLLMLSV-------L-------DD----------DQYRQLAAVAHS-LEM-GVLTEVS------------N 166 (452)
T ss_dssp HHHHTTCSEEEEETTT-------C-------CH----------HHHHHHHHHHHH-TTC-EEEEEEC------------S
T ss_pred HHHHcCCCEEEEEccc-------C-------CH----------HHHHHHHHHHHH-cCC-eEEEEeC------------C
Confidence 3788999999998874 1 11 246677777776 343 4666665 2
Q ss_pred HHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh--CCcEEEeCCC-CHHHHHH
Q 025135 113 LGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY--QGTFICSGGF-TRELGIQ 189 (257)
Q Consensus 113 ~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~G~i-t~~~a~~ 189 (257)
.++. +...++| .++|-+..+.+.... .. ......+.+.+ ++++|+-+|| |++++..
T Consensus 167 ~eE~----~~A~~lg------a~iIGinnr~L~t~~----------~d-l~~~~~L~~~ip~~~~vIaEsGI~t~edv~~ 225 (452)
T 1pii_A 167 EEEQ----ERAIALG------AKVVGINNRDLRDLS----------ID-LNRTRELAPKLGHNVTVISESGINTYAQVRE 225 (452)
T ss_dssp HHHH----HHHHHTT------CSEEEEESEETTTTE----------EC-THHHHHHHHHHCTTSEEEEESCCCCHHHHHH
T ss_pred HHHH----HHHHHCC------CCEEEEeCCCCCCCC----------CC-HHHHHHHHHhCCCCCeEEEECCCCCHHHHHH
Confidence 3433 2344567 777777665443321 11 23334455555 4678888999 9999999
Q ss_pred HHHcCCCcEEEechHHhhCchHHHHHH
Q 025135 190 ALAEDGADLVAYGRLFISNPDLVLRFK 216 (257)
Q Consensus 190 ~l~~g~~D~V~igR~~iadP~l~~k~~ 216 (257)
+.+. +|.|.+|-+++..++.-..++
T Consensus 226 ~~~~--a~avLVGealmr~~d~~~~~~ 250 (452)
T 1pii_A 226 LSHF--ANGFLIGSALMAHDDLHAAVR 250 (452)
T ss_dssp HTTT--CSEEEECHHHHTCSCHHHHHH
T ss_pred HHHh--CCEEEEcHHHcCCcCHHHHHH
Confidence 9876 999999999999887655443
No 312
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=96.05 E-value=0.012 Score=51.85 Aligned_cols=113 Identities=13% Similarity=0.120 Sum_probs=60.3
Q ss_pred cCCcCCCCCCc--hhhHhhH---HHHHHHHHHHHhCCC-eEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCc
Q 025135 60 INDRTDEYGGS--IENRCRF---LMQLVREVIVAIGAD-RVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAK 133 (257)
Q Consensus 60 ~N~R~D~yGGs--~enR~r~---~~eiv~aiR~~vg~~-~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~ 133 (257)
.|+|...+..- ..|...+ ..+-++++|+..+.. +|.+-.. +.++..+ ..+.|
T Consensus 162 ~~hr~~l~d~vlik~nh~~~~g~i~~ai~~~r~~~~~~~~i~vev~------------tlee~~~----A~~aG------ 219 (294)
T 3c2e_A 162 DTHRYDLSSMVMLKDNHIWATGSITNAVKNARAVCGFAVKIEVECL------------SEDEATE----AIEAG------ 219 (294)
T ss_dssp BCCCCSTTTSEEECHHHHHHHSSHHHHHHHHHHHHCTTSCEEEECS------------SSHHHHH----HHHHT------
T ss_pred CceecCccceEEeecchhhhcCCHHHHHHHHHHhcCcCCeEEEecC------------CHHHHHH----HHHcC------
Confidence 36676666653 2455555 577888999999864 5665332 2333332 22468
Q ss_pred eeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHH----hCCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCc
Q 025135 134 LTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRS----YQGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNP 209 (257)
Q Consensus 134 vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~----~~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP 209 (257)
+|+|-+.... ........+.++.. -.++|.++||||++.+.++++.| +|.|++|.....-|
T Consensus 220 aD~I~ld~~~--------------~~~l~~~v~~l~~~~~g~~~v~I~ASGGIt~~ni~~~~~~G-vD~i~vGs~i~~a~ 284 (294)
T 3c2e_A 220 ADVIMLDNFK--------------GDGLKMCAQSLKNKWNGKKHFLLECSGGLNLDNLEEYLCDD-IDIYSTSSIHQGTP 284 (294)
T ss_dssp CSEEECCC-----------------------------------CCEEEEECCCCC------CCCS-CSEEECGGGTSSCC
T ss_pred CCEEEECCCC--------------HHHHHHHHHHhcccccCCCCeEEEEECCCCHHHHHHHHHcC-CCEEEEechhcCCC
Confidence 8888764310 00111111223222 12789999999999999999887 89999998754433
No 313
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=96.04 E-value=0.031 Score=47.51 Aligned_cols=83 Identities=18% Similarity=0.139 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHH
Q 025135 113 LGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQAL 191 (257)
Q Consensus 113 ~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l 191 (257)
.+++..+++.|.+.| +..++++-. .+...+.++.+++.++..+++.|.+ +.++++.++
T Consensus 45 ~~~a~~~a~al~~gG------i~~iEvt~~---------------t~~a~e~I~~l~~~~~~~~iGaGTVlt~~~a~~Ai 103 (232)
T 4e38_A 45 AEDIIPLGKVLAENG------LPAAEITFR---------------SDAAVEAIRLLRQAQPEMLIGAGTILNGEQALAAK 103 (232)
T ss_dssp GGGHHHHHHHHHHTT------CCEEEEETT---------------STTHHHHHHHHHHHCTTCEEEEECCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHCC------CCEEEEeCC---------------CCCHHHHHHHHHHhCCCCEEeECCcCCHHHHHHHH
Confidence 467889999999999 888988542 1123467788888887678888887 999999999
Q ss_pred HcCCCcEEEechHHhhCchHHHHHHc-CCC
Q 025135 192 AEDGADLVAYGRLFISNPDLVLRFKL-NAP 220 (257)
Q Consensus 192 ~~g~~D~V~igR~~iadP~l~~k~~~-g~~ 220 (257)
+.| +|+|...- .||++.+..++ |.+
T Consensus 104 ~AG-A~fIvsP~---~~~~vi~~~~~~gi~ 129 (232)
T 4e38_A 104 EAG-ATFVVSPG---FNPNTVRACQEIGID 129 (232)
T ss_dssp HHT-CSEEECSS---CCHHHHHHHHHHTCE
T ss_pred HcC-CCEEEeCC---CCHHHHHHHHHcCCC
Confidence 998 99998753 58888876554 544
No 314
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=95.99 E-value=0.12 Score=45.17 Aligned_cols=122 Identities=15% Similarity=0.091 Sum_probs=73.3
Q ss_pred HHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCCCC
Q 025135 27 YRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAIDHL 105 (257)
Q Consensus 27 f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~~~ 105 (257)
+.+-+....+.|.|||-+.+..|- |. -=|.+.|.+++ +.++++++.. +|.+=++.
T Consensus 24 l~~lv~~li~~Gv~gl~~~GttGE----~~-----------~Ls~~Er~~v~----~~~~~~~~gr~pvi~Gvg~----- 79 (291)
T 3a5f_A 24 LSELIEWHIKSKTDAIIVCGTTGE----AT-----------TMTETERKETI----KFVIDKVNKRIPVIAGTGS----- 79 (291)
T ss_dssp HHHHHHHHHHTTCCEEEESSGGGT----GG-----------GSCHHHHHHHH----HHHHHHHTTSSCEEEECCC-----
T ss_pred HHHHHHHHHHcCCCEEEECccccC----hh-----------hCCHHHHHHHH----HHHHHHhCCCCcEEEeCCc-----
Confidence 444444556799999998876542 11 01345566554 4444444433 66654443
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEE-e-----
Q 025135 106 DATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFIC-S----- 179 (257)
Q Consensus 106 ~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~-~----- 179 (257)
.+.++++++++..++.| +|.+-+..|.|..+ .........+.|.+++++||+. +
T Consensus 80 -----~~t~~ai~la~~a~~~G------adavlv~~P~y~~~---------s~~~l~~~f~~ia~a~~lPiilYn~P~~t 139 (291)
T 3a5f_A 80 -----NNTAASIAMSKWAESIG------VDGLLVITPYYNKT---------TQKGLVKHFKAVSDAVSTPIIIYNVPGRT 139 (291)
T ss_dssp -----SSHHHHHHHHHHHHHTT------CSEEEEECCCSSCC---------CHHHHHHHC-CTGGGCCSCEEEEECHHHH
T ss_pred -----ccHHHHHHHHHHHHhcC------CCEEEEcCCCCCCC---------CHHHHHHHHHHHHHhcCCCEEEEeCcccc
Confidence 35788999999999999 88888777765432 1222223334566667788665 2
Q ss_pred CC-CCHHHHHHHHH
Q 025135 180 GG-FTRELGIQALA 192 (257)
Q Consensus 180 G~-it~~~a~~~l~ 192 (257)
|. ++++...++.+
T Consensus 140 g~~l~~~~~~~La~ 153 (291)
T 3a5f_A 140 GLNITPGTLKELCE 153 (291)
T ss_dssp SCCCCHHHHHHHTT
T ss_pred CCCCCHHHHHHHHc
Confidence 32 47777777654
No 315
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=95.98 E-value=0.17 Score=43.54 Aligned_cols=96 Identities=8% Similarity=0.032 Sum_probs=60.8
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCe
Q 025135 14 ALQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADR 93 (257)
Q Consensus 14 ~lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~ 93 (257)
.++...++++ ...|+.+.+.|+|.||+-.-+ | -. + .....+.+.+..+|+..++.|
T Consensus 25 pl~~~t~~e~----l~~a~~~~~~~aD~vElR~D~-------l-----------~~-~-~~~~~v~~~l~~lr~~~~~lP 80 (258)
T 4h3d_A 25 PIIGKNKKDI----IKEAKELKDACLDIIEWRVDF-------F-----------EN-V-ENIKEVKEVLYELRSYIHDIP 80 (258)
T ss_dssp EECCSSHHHH----HHHHHHHTTSSCSEEEEEGGG-------C-----------TT-T-TCHHHHHHHHHHHHHHCTTSC
T ss_pred EeCCCCHHHH----HHHHHHHhhcCCCEEEEeecc-------c-----------cc-c-CCHHHHHHHHHHHHHhcCCCC
Confidence 3444444444 445556778999999986542 1 10 0 124568899999999987667
Q ss_pred EEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEee
Q 025135 94 VGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVT 140 (257)
Q Consensus 94 v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~ 140 (257)
|.+-++.. .+++....+.+....+.+.+.+.|. ++|+++.
T Consensus 81 iI~T~Rt~--~EGG~~~~~~~~~~~ll~~~~~~~~-----~d~iDvE 120 (258)
T 4h3d_A 81 LLFTFRSV--VEGGEKLISRDYYTTLNKEISNTGL-----VDLIDVE 120 (258)
T ss_dssp EEEECCCG--GGTCSCCCCHHHHHHHHHHHHHTTC-----CSEEEEE
T ss_pred EEEEEech--hhCCCCCCCHHHHHHHHHHHHhcCC-----chhhHHh
Confidence 77666632 2333222345667777777777763 7899875
No 316
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=95.98 E-value=0.0095 Score=52.10 Aligned_cols=46 Identities=17% Similarity=0.177 Sum_probs=39.9
Q ss_pred HHHHHHHHHhCCcEE--EeCCC-CHHHHHHHHHcCCCcEEEechHHhh--Cc
Q 025135 163 QLLRTWRRSYQGTFI--CSGGF-TRELGIQALAEDGADLVAYGRLFIS--NP 209 (257)
Q Consensus 163 ~~~~~ir~~~~~pvi--~~G~i-t~~~a~~~l~~g~~D~V~igR~~ia--dP 209 (257)
..++.+++..++||+ +.||+ +++++.++++.| +|.|++|++++. ||
T Consensus 197 ~~i~~l~~~~~~pvi~~a~GGI~~~e~i~~~~~aG-adgvvvGsai~~~~dp 247 (297)
T 2zbt_A 197 ELVKWVHDHGRLPVVNFAAGGIATPADAALMMHLG-MDGVFVGSGIFKSGDP 247 (297)
T ss_dssp HHHHHHHHHSSCSSCEEBCSSCCSHHHHHHHHHTT-CSEEEECGGGGGSSCH
T ss_pred HHHHHHHHhcCCCcEEEeeCCCCCHHHHHHHHHcC-CCEEEEchHHhCCCCH
Confidence 456677887788988 99999 999999999987 999999999994 56
No 317
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=95.92 E-value=0.082 Score=46.41 Aligned_cols=128 Identities=14% Similarity=0.131 Sum_probs=79.9
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-
Q 025135 14 ALQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD- 92 (257)
Q Consensus 14 ~lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~- 92 (257)
.+..+.++++++ ...+.|.|||-+.+..|- |. -=|.+.|.+++..++ ++++..
T Consensus 21 ~iD~~~l~~lv~-------~li~~Gv~gl~v~GttGE----~~-----------~Ls~~Er~~v~~~~~----~~~~grv 74 (300)
T 3eb2_A 21 RVRADVMGRLCD-------DLIQAGVHGLTPLGSTGE----FA-----------YLGTAQREAVVRATI----EAAQRRV 74 (300)
T ss_dssp CBCHHHHHHHHH-------HHHHTTCSCBBTTSGGGT----GG-----------GCCHHHHHHHHHHHH----HHHTTSS
T ss_pred CcCHHHHHHHHH-------HHHHcCCCEEEECccccC----cc-----------ccCHHHHHHHHHHHH----HHhCCCC
Confidence 344555555554 456799999988766531 11 013466666555444 444433
Q ss_pred eEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh
Q 025135 93 RVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY 172 (257)
Q Consensus 93 ~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~ 172 (257)
+|.+=++. .+.++++++++..++.| +|.+-+..|.|..+ .........+.|.+++
T Consensus 75 pviaGvg~----------~~t~~ai~la~~a~~~G------adavlv~~P~y~~~---------~~~~l~~~f~~va~a~ 129 (300)
T 3eb2_A 75 PVVAGVAS----------TSVADAVAQAKLYEKLG------ADGILAILEAYFPL---------KDAQIESYFRAIADAV 129 (300)
T ss_dssp CBEEEEEE----------SSHHHHHHHHHHHHHHT------CSEEEEEECCSSCC---------CHHHHHHHHHHHHHHC
T ss_pred cEEEeCCC----------CCHHHHHHHHHHHHHcC------CCEEEEcCCCCCCC---------CHHHHHHHHHHHHHHC
Confidence 66555543 35788999999999999 88887777766432 1223344557788888
Q ss_pred CCcEEEe------CC-CCHHHHHHHHH
Q 025135 173 QGTFICS------GG-FTRELGIQALA 192 (257)
Q Consensus 173 ~~pvi~~------G~-it~~~a~~~l~ 192 (257)
++||+.- |. ++++...++.+
T Consensus 130 ~lPiilYn~P~~tg~~l~~~~~~~La~ 156 (300)
T 3eb2_A 130 EIPVVIYTNPQFQRSDLTLDVIARLAE 156 (300)
T ss_dssp SSCEEEEECTTTCSSCCCHHHHHHHHT
T ss_pred CCCEEEEECccccCCCCCHHHHHHHHc
Confidence 8996642 22 37887777754
No 318
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=95.90 E-value=0.28 Score=43.24 Aligned_cols=149 Identities=9% Similarity=0.066 Sum_probs=92.3
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-
Q 025135 14 ALQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD- 92 (257)
Q Consensus 14 ~lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~- 92 (257)
.+..+.++++++. ..+.|.|||-+.+..|- |. -=|.+.|.++ ++.++++++..
T Consensus 24 ~iD~~~l~~lv~~-------li~~Gv~Gl~v~GtTGE----~~-----------~Ls~~Er~~v----~~~~~~~~~grv 77 (311)
T 3h5d_A 24 SINFDAIPALIEH-------LLAHHTDGILLAGTTAE----SP-----------TLTHDEELEL----FAAVQKVVNGRV 77 (311)
T ss_dssp SBCTTHHHHHHHH-------HHHTTCCCEEESSTTTT----GG-----------GSCHHHHHHH----HHHHHHHSCSSS
T ss_pred CcCHHHHHHHHHH-------HHHcCCCEEEECccccC----hh-----------hCCHHHHHHH----HHHHHHHhCCCC
Confidence 4556666666654 45799999999876642 11 0134555554 55555565444
Q ss_pred eEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCce-eEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHH
Q 025135 93 RVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKL-TYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRS 171 (257)
Q Consensus 93 ~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~v-d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~ 171 (257)
+|.+=++. .+..+++++++..++.| . |.+-+..|.|..+ .........+.|.++
T Consensus 78 pViaGvg~----------~~t~~ai~la~~A~~~G------a~davlv~~P~y~~~---------s~~~l~~~f~~va~a 132 (311)
T 3h5d_A 78 PLIAGVGT----------NDTRDSIEFVKEVAEFG------GFAAGLAIVPYYNKP---------SQEGMYQHFKAIADA 132 (311)
T ss_dssp CEEEECCC----------SSHHHHHHHHHHHHHSC------CCSEEEEECCCSSCC---------CHHHHHHHHHHHHHS
T ss_pred cEEEeCCC----------cCHHHHHHHHHHHHhcC------CCcEEEEcCCCCCCC---------CHHHHHHHHHHHHHh
Confidence 66654442 35788999999999998 5 8887777765432 122334556778888
Q ss_pred hCCcEEEe------CC-CCHHHHHHHHHcCCCcEEEechHHhhCchHHHHHHc
Q 025135 172 YQGTFICS------GG-FTRELGIQALAEDGADLVAYGRLFISNPDLVLRFKL 217 (257)
Q Consensus 172 ~~~pvi~~------G~-it~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~ 217 (257)
+++||+.- |. ++++...++.+... +|++==.. |.....++++
T Consensus 133 ~~lPiilYn~P~~tg~~l~~~~~~~La~~pn--IvgiKdss--d~~~~~~~~~ 181 (311)
T 3h5d_A 133 SDLPIIIYNIPGRVVVELTPETMLRLADHPN--IIGVKECT--SLANMAYLIE 181 (311)
T ss_dssp CSSCEEEEECHHHHSSCCCHHHHHHHHTSTT--EEEEEECS--CHHHHHHHHH
T ss_pred CCCCEEEEecccccCCCCCHHHHHHHhcCCC--EEEEEeCC--CHHHHHHHHH
Confidence 89997652 32 48888888776443 44443222 6555666554
No 319
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=95.87 E-value=0.17 Score=44.50 Aligned_cols=124 Identities=14% Similarity=0.052 Sum_probs=76.7
Q ss_pred HHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCCCCC
Q 025135 28 RQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAIDHLD 106 (257)
Q Consensus 28 ~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~~~~ 106 (257)
.+-+.+..+.|.|||-+.+..|-. .+ =|.+.|.+++.. ++++++.. +|.+=++.
T Consensus 32 ~~lv~~li~~Gv~gl~v~GtTGE~----~~-----------Ls~~Er~~v~~~----~~~~~~grvpviaGvg~------ 86 (309)
T 3fkr_A 32 KRAVDFMIDAGSDGLCILANFSEQ----FA-----------ITDDERDVLTRT----ILEHVAGRVPVIVTTSH------ 86 (309)
T ss_dssp HHHHHHHHHTTCSCEEESSGGGTG----GG-----------SCHHHHHHHHHH----HHHHHTTSSCEEEECCC------
T ss_pred HHHHHHHHHcCCCEEEECccccCc----cc-----------CCHHHHHHHHHH----HHHHhCCCCcEEEecCC------
Confidence 333345567999999998766421 10 134566655444 44444433 66654443
Q ss_pred CCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEe-----CC
Q 025135 107 ATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICS-----GG 181 (257)
Q Consensus 107 ~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~-----G~ 181 (257)
.+..+++++++..++.| +|.+-+..|.|..... . .........+.|.+++++||+.- |-
T Consensus 87 ----~~t~~ai~la~~A~~~G------adavlv~~Pyy~~~~~-----~-s~~~l~~~f~~va~a~~lPiilYn~P~tg~ 150 (309)
T 3fkr_A 87 ----YSTQVCAARSLRAQQLG------AAMVMAMPPYHGATFR-----V-PEAQIFEFYARVSDAIAIPIMVQDAPASGT 150 (309)
T ss_dssp ----SSHHHHHHHHHHHHHTT------CSEEEECCSCBTTTBC-----C-CHHHHHHHHHHHHHHCSSCEEEEECGGGCC
T ss_pred ----chHHHHHHHHHHHHHcC------CCEEEEcCCCCccCCC-----C-CHHHHHHHHHHHHHhcCCCEEEEeCCCCCC
Confidence 35788999999999999 8888777775521000 0 12233445577888888896652 32
Q ss_pred -CCHHHHHHHHH
Q 025135 182 -FTRELGIQALA 192 (257)
Q Consensus 182 -it~~~a~~~l~ 192 (257)
++++...++.+
T Consensus 151 ~l~~~~~~~La~ 162 (309)
T 3fkr_A 151 ALSAPFLARMAR 162 (309)
T ss_dssp CCCHHHHHHHHH
T ss_pred CCCHHHHHHHHh
Confidence 47888888875
No 320
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=95.82 E-value=0.12 Score=43.83 Aligned_cols=145 Identities=12% Similarity=0.088 Sum_probs=78.2
Q ss_pred HHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCC
Q 025135 28 RQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDA 107 (257)
Q Consensus 28 ~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~ 107 (257)
...++.+.+.|+|.||+-.- -|... ....+.+.++.+|+..+..||.+-++.. .+++
T Consensus 20 ~~~~~~~~~~~~D~vElRvD------------------~l~~~---~~~~v~~~~~~lr~~~~~~PiI~T~R~~--~eGG 76 (238)
T 1sfl_A 20 LIQKINHRIDAIDVLELRID------------------QFENV---TVDQVAEMITKLKVMQDSFKLLVTYRTK--LQGG 76 (238)
T ss_dssp HHHHHHHTTTTCSEEEEECT------------------TSTTC---CHHHHHHHHHHHC---CCSEEEEECCBG--GGTS
T ss_pred HHHHHHhhhcCCCEEEEEec------------------ccccC---CHHHHHHHHHHHHHhccCCCEEEEeecc--ccCC
Confidence 34456677889999997543 22211 1356888899999988766776665532 2222
Q ss_pred CCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEe-CCC--CH
Q 025135 108 TDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICS-GGF--TR 184 (257)
Q Consensus 108 ~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~-G~i--t~ 184 (257)
....+.+...++.+.+.+.|. ++||++.-. .. ........+....+..+..||++ ..+ ||
T Consensus 77 ~~~~~~~~~~~ll~~~~~~~~-----~d~iDvEl~-~~-----------~~~~~~~~l~~~~~~~~~kvI~S~Hdf~~tp 139 (238)
T 1sfl_A 77 YGQFTNDSYLNLISDLANING-----IDMIDIEWQ-AD-----------IDIEKHQRIITHLQQYNKEVIISHHNFESTP 139 (238)
T ss_dssp CBCCCHHHHHHHHHHGGGCTT-----CCEEEEECC-TT-----------SCHHHHHHHHHHHHHTTCEEEEEEEESSCCC
T ss_pred CCCCCHHHHHHHHHHHHHhCC-----CCEEEEEcc-CC-----------CChHHHHHHHHHHHhcCCEEEEEecCCCCCc
Confidence 222356777888888877632 899998531 10 01111111111122345667776 444 44
Q ss_pred --HHHHHHHH---cCCCcEEEechHHhhCchHH
Q 025135 185 --ELGIQALA---EDGADLVAYGRLFISNPDLV 212 (257)
Q Consensus 185 --~~a~~~l~---~g~~D~V~igR~~iadP~l~ 212 (257)
++..+.++ +-+||+|=++...-..-|..
T Consensus 140 ~~~el~~~~~~~~~~gaDivKia~~a~~~~D~l 172 (238)
T 1sfl_A 140 PLDELQFIFFKMQKFNPEYVKLAVMPHNKNDVL 172 (238)
T ss_dssp CHHHHHHHHHHHHTTCCSEEEEEECCSSHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEecCCCHHHHH
Confidence 44433332 33489888877654444443
No 321
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=95.80 E-value=0.15 Score=43.25 Aligned_cols=46 Identities=15% Similarity=0.120 Sum_probs=36.2
Q ss_pred HHHHHHHhC-CcEEEeCCCCHH-----------HHHHHHHcCCCcEEEechHHhhCchH
Q 025135 165 LRTWRRSYQ-GTFICSGGFTRE-----------LGIQALAEDGADLVAYGRLFISNPDL 211 (257)
Q Consensus 165 ~~~ir~~~~-~pvi~~G~it~~-----------~a~~~l~~g~~D~V~igR~~iadP~l 211 (257)
++.+|+..+ .++++.||++++ ...++++.| +|++.+||+.+..+|.
T Consensus 167 i~~lr~~~~~~~i~V~gGI~~~g~~~~dq~rv~t~~~a~~aG-ad~iVvGr~I~~a~dp 224 (246)
T 2yyu_A 167 AAFIKERCGASFLAVTPGIRFADDAAHDQVRVVTPRKARALG-SDYIVIGRSLTRAADP 224 (246)
T ss_dssp HHHHHHHHCTTSEEEECCCCCCC-------CCCCHHHHHHHT-CSEEEECHHHHTSSSH
T ss_pred HHHHHHhcCCCCEEEeCCcCCCCCCcccccccCCHHHHHHcC-CCEEEECHhhcCCCCH
Confidence 556777764 458888999765 588888887 9999999999976553
No 322
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=95.77 E-value=0.038 Score=45.40 Aligned_cols=36 Identities=14% Similarity=0.101 Sum_probs=31.8
Q ss_pred hCCcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCc
Q 025135 172 YQGTFICSGGF-TRELGIQALAEDGADLVAYGRLFISNP 209 (257)
Q Consensus 172 ~~~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~iadP 209 (257)
.++|||++|.+ |.+++++ ++.| +|.|+-+..-+.+.
T Consensus 148 ~~~PiIaGGlI~t~edv~~-l~aG-A~aIsTs~~~LW~~ 184 (188)
T 1vkf_A 148 PGRTVIAAGLVETEEEARE-ILKH-VSAISTSSRILWKM 184 (188)
T ss_dssp TTSEEEEESCCCSHHHHHH-HTTT-SSEEEECCHHHHTC
T ss_pred cCCCEEEECCcCCHHHHHH-HHCC-CeEEEeCCHHHhCC
Confidence 67899999999 8999999 9988 99999998877654
No 323
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=95.67 E-value=0.29 Score=42.55 Aligned_cols=117 Identities=14% Similarity=0.125 Sum_probs=73.3
Q ss_pred HHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCC
Q 025135 27 YRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLD 106 (257)
Q Consensus 27 f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~ 106 (257)
+.+-+....+.|.|||-+.+..|- |. -=|.+.|.++ ++.++++++. |.+=++.
T Consensus 21 l~~lv~~li~~Gv~gl~v~GttGE----~~-----------~Ls~~Er~~v----~~~~~~~~~g--vi~Gvg~------ 73 (286)
T 2r91_A 21 FANHVKNITSKGVDVVFVAGTTGL----GP-----------ALSLQEKMEL----TDAATSAARR--VIVQVAS------ 73 (286)
T ss_dssp HHHHHHHHHHTTCCEEEETSTTTT----GG-----------GSCHHHHHHH----HHHHHHHCSS--EEEECCC------
T ss_pred HHHHHHHHHHCCCCEEEECccccC----hh-----------hCCHHHHHHH----HHHHHHHhCC--EEEeeCC------
Confidence 333444556799999998876542 11 0134555544 5555555544 4433332
Q ss_pred CCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCccc-CCCcCCCCCCCchhHHHHHHHHHHHhCCcEEE------e
Q 025135 107 ATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTA-YGQTESGRPGTEDEEAQLLRTWRRSYQGTFIC------S 179 (257)
Q Consensus 107 ~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~------~ 179 (257)
.+.++++++++..++.| +|.+-+..|.|.. + .........+.|.++.++||+. +
T Consensus 74 ----~~t~~ai~la~~A~~~G------adavlv~~P~y~~~~---------s~~~l~~~f~~va~a~~lPiilYn~P~~t 134 (286)
T 2r91_A 74 ----LNADEAIALAKYAESRG------AEAVASLPPYYFPRL---------SERQIAKYFRDLCSAVSIPVFLYNYPAAV 134 (286)
T ss_dssp ----SSHHHHHHHHHHHHHTT------CSEEEECCSCSSTTC---------CHHHHHHHHHHHHHHCSSCEEEEECHHHH
T ss_pred ----CCHHHHHHHHHHHHhcC------CCEEEEcCCcCCCCC---------CHHHHHHHHHHHHHhcCCCEEEEeChhhc
Confidence 35788999999999999 8888887776543 2 1233344556788888999765 2
Q ss_pred C-CCCHHHHHH
Q 025135 180 G-GFTRELGIQ 189 (257)
Q Consensus 180 G-~it~~~a~~ 189 (257)
| .++++...+
T Consensus 135 g~~l~~~~~~~ 145 (286)
T 2r91_A 135 GRDVDARAAKE 145 (286)
T ss_dssp SSCCCHHHHHH
T ss_pred CCCCCHHHHHh
Confidence 3 247877666
No 324
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=95.61 E-value=0.18 Score=44.28 Aligned_cols=125 Identities=10% Similarity=0.044 Sum_probs=78.4
Q ss_pred HHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCCCCC
Q 025135 28 RQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAIDHLD 106 (257)
Q Consensus 28 ~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~~~~ 106 (257)
.+-+....+.|.|||-+.+..|- |.+ =|.+.|.++ ++.++++++.. +|.+=++.
T Consensus 38 ~~lv~~li~~Gv~Gl~v~GtTGE----~~~-----------Ls~~Er~~v----~~~~~~~~~gr~pviaGvg~------ 92 (307)
T 3s5o_A 38 EENLHKLGTFPFRGFVVQGSNGE----FPF-----------LTSSERLEV----VSRVRQAMPKNRLLLAGSGC------ 92 (307)
T ss_dssp HHHHHHHTTSCCSEEEESSGGGT----GGG-----------SCHHHHHHH----HHHHHHTSCTTSEEEEECCC------
T ss_pred HHHHHHHHHcCCCEEEECccccc----hhh-----------CCHHHHHHH----HHHHHHHcCCCCcEEEecCC------
Confidence 33344556799999998876642 110 123555544 55566666544 66654432
Q ss_pred CCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEe------C
Q 025135 107 ATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICS------G 180 (257)
Q Consensus 107 ~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~------G 180 (257)
.+.++++++++..++.| +|.+-+..|.|..... .........+.|.++.++||+.- |
T Consensus 93 ----~~t~~ai~la~~A~~~G------adavlv~~P~y~~~~~-------s~~~l~~~f~~ia~a~~lPiilYn~P~~tg 155 (307)
T 3s5o_A 93 ----ESTQATVEMTVSMAQVG------ADAAMVVTPCYYRGRM-------SSAALIHHYTKVADLSPIPVVLYSVPANTG 155 (307)
T ss_dssp ----SSHHHHHHHHHHHHHTT------CSEEEEECCCTTGGGC-------CHHHHHHHHHHHHHHCSSCEEEEECHHHHS
T ss_pred ----CCHHHHHHHHHHHHHcC------CCEEEEcCCCcCCCCC-------CHHHHHHHHHHHHhhcCCCEEEEeCCcccC
Confidence 35788999999999999 8888877776643110 12233445577888888997642 3
Q ss_pred -CCCHHHHHHHHHcC
Q 025135 181 -GFTRELGIQALAED 194 (257)
Q Consensus 181 -~it~~~a~~~l~~g 194 (257)
.++++...++.+..
T Consensus 156 ~~l~~~~~~~La~~p 170 (307)
T 3s5o_A 156 LDLPVDAVVTLSQHP 170 (307)
T ss_dssp CCCCHHHHHHHHTST
T ss_pred CCCCHHHHHHHhcCC
Confidence 24788888876543
No 325
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=95.60 E-value=0.58 Score=41.71 Aligned_cols=154 Identities=15% Similarity=0.135 Sum_probs=82.5
Q ss_pred HHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchh-hHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCC
Q 025135 30 AALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIE-NRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDAT 108 (257)
Q Consensus 30 AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~e-nR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~ 108 (257)
.+++|++.|.|+|.+|.=.| | |. .-.++ ...+++.+|.+++++. |- |+.+-+=++..- ..
T Consensus 115 sve~a~~~GADAVk~lv~~g--------~------d~-~~e~~~~q~~~l~rv~~ec~~~-Gi-PlllEil~y~~~--~~ 175 (332)
T 3iv3_A 115 SIKRLKEAGADAVKFLLYYD--------V------DG-DPQVNVQKQAYIERIGSECQAE-DI-PFFLEILTYDET--IS 175 (332)
T ss_dssp CHHHHHHTTCSEEEEEEEEC--------T------TS-CHHHHHHHHHHHHHHHHHHHHH-TC-CEEEEEEECBTT--BS
T ss_pred CHHHHHHcCCCEEEEEEEcC--------C------Cc-hHHHHHHHHHHHHHHHHHHHHc-CC-ceEEEEeccCCC--CC
Confidence 46788899999999886331 1 10 00011 2356777777777754 32 555543221110 00
Q ss_pred CCCc-------HHHHHHHHHHH--HhcCCccCCceeEEEeeCCCcccCCCcCCCCCC--CchhHHHHHHHHHHHhCCcE-
Q 025135 109 DSDP-------LGLGLAVIQGL--NKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPG--TEDEEAQLLRTWRRSYQGTF- 176 (257)
Q Consensus 109 ~~~~-------~~~~~~l~~~L--~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ir~~~~~pv- 176 (257)
+..+ .+...+.++.+ .+.| +|++-+.-|.-..+...+..... ........++++-+..++|+
T Consensus 176 ~~~~~~~a~~~p~~V~~a~R~~~~~elG------aDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~~~P~v 249 (332)
T 3iv3_A 176 NNSSVEFAKVKVHKVNDAMKVFSAERFG------IDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEASTDLPYI 249 (332)
T ss_dssp CTTSHHHHTTHHHHHHHHHHHHTSGGGC------CSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTCSSCEE
T ss_pred CCcchhhhccCHHHHHHHHHHHhhcCcC------CcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhcCCCCEE
Confidence 1112 23356678888 5668 89887753321110000000000 11122233445556678995
Q ss_pred EEeCCCCHHH----HHHHHHcCCC--cEEEechHHhhCc
Q 025135 177 ICSGGFTREL----GIQALAEDGA--DLVAYGRLFISNP 209 (257)
Q Consensus 177 i~~G~it~~~----a~~~l~~g~~--D~V~igR~~iadP 209 (257)
+++||.+.++ .+.+++.| + ..|.+||....+.
T Consensus 250 ~lsgG~~~~~fl~~v~~A~~aG-a~f~Gv~~GRnvwq~~ 287 (332)
T 3iv3_A 250 YLSAGVSAELFQETLVFAHKAG-AKFNGVLCGRATWAGS 287 (332)
T ss_dssp EECTTCCHHHHHHHHHHHHHHT-CCCCEEEECHHHHTTH
T ss_pred EECCCCCHHHHHHHHHHHHHcC-CCcceEEeeHHHHHhh
Confidence 5788886544 45666777 6 9999999998873
No 326
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=95.56 E-value=0.15 Score=44.99 Aligned_cols=70 Identities=11% Similarity=-0.011 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCC-cEEEeCCCCHH-------
Q 025135 114 GLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQG-TFICSGGFTRE------- 185 (257)
Q Consensus 114 ~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~-pvi~~G~it~~------- 185 (257)
+....+++...+.| ++.+-.+ + .. +..||+.++. .+++++||.++
T Consensus 158 e~V~~lA~~a~~~G------~dGvV~s-~--------------~E------~~~IR~~~~~~fl~VTPGIr~qG~~~~DQ 210 (303)
T 3ru6_A 158 EAVINFSKISYENG------LDGMVCS-V--------------FE------SKKIKEHTSSNFLTLTPGIRPFGETNDDQ 210 (303)
T ss_dssp HHHHHHHHHHHHTT------CSEEECC-T--------------TT------HHHHHHHSCTTSEEEECCCCTTC------
T ss_pred HHHHHHHHHHHHcC------CCEEEEC-H--------------HH------HHHHHHhCCCccEEECCCcCcccCCcccc
Confidence 44566888888888 7765432 1 01 3457887754 47778888543
Q ss_pred ----HHHHHHHcCCCcEEEechHHhhCchH
Q 025135 186 ----LGIQALAEDGADLVAYGRLFISNPDL 211 (257)
Q Consensus 186 ----~a~~~l~~g~~D~V~igR~~iadP~l 211 (257)
...++++.| +|++.+||+....+|-
T Consensus 211 ~Rv~t~~~a~~aG-Ad~iVvGr~I~~a~dp 239 (303)
T 3ru6_A 211 KRVANLAMARENL-SDYIVVGRPIYKNENP 239 (303)
T ss_dssp --CCSHHHHHHTT-CSEEEECHHHHTSSCH
T ss_pred cccCCHHHHHHcC-CCEEEEChHHhCCCCH
Confidence 466788887 9999999999975443
No 327
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=95.56 E-value=0.12 Score=43.12 Aligned_cols=66 Identities=17% Similarity=0.170 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCCCHHH-------
Q 025135 114 GLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGFTREL------- 186 (257)
Q Consensus 114 ~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~it~~~------- 186 (257)
+....+++. .+.| ++++. . + ..++.+|+..+.+ ++++|+.++.
T Consensus 126 ~~v~~~a~~-~e~G------~dvV~--~-----------------~---~~~~~ir~~~~~~-~v~pGI~~~~~~~dq~r 175 (213)
T 1vqt_A 126 DYMDRIEKL-NKLG------CDFVL--P-----------------G---PWAKALREKIKGK-ILVPGIRMEVKADDQKD 175 (213)
T ss_dssp HHHHHHHHH-HHHT------CEEEC--C-----------------H---HHHHHHTTTCCSC-EEECCBC---------C
T ss_pred HHHHHHHHH-hcCC------CEEEE--c-----------------H---HHHHHHHHHCCCC-EEECCCCCCCCccchhh
Confidence 556677888 8889 77321 1 1 2345577777777 7778886654
Q ss_pred ---HHHHHHcCCCcEEEechHHhhCchH
Q 025135 187 ---GIQALAEDGADLVAYGRLFISNPDL 211 (257)
Q Consensus 187 ---a~~~l~~g~~D~V~igR~~iadP~l 211 (257)
..+ ++.| +|+|.+||+....+|-
T Consensus 176 v~t~~~-i~aG-ad~iVvGR~I~~a~dP 201 (213)
T 1vqt_A 176 VVTLEE-MKGI-ANFAVLGREIYLSENP 201 (213)
T ss_dssp CBCHHH-HTTT-CSEEEESHHHHTSSCH
T ss_pred cCCHHH-HHCC-CCEEEEChhhcCCCCH
Confidence 356 7776 9999999999966553
No 328
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=95.56 E-value=0.31 Score=43.03 Aligned_cols=148 Identities=11% Similarity=0.051 Sum_probs=87.0
Q ss_pred CChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-e
Q 025135 15 LQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-R 93 (257)
Q Consensus 15 lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~ 93 (257)
+..+.++++++ ...+.|.|||-+.+..|- |. -=|.+.|.+++. .++++++.. +
T Consensus 30 iD~~~l~~lv~-------~li~~Gv~Gl~v~GtTGE----~~-----------~Ls~eEr~~v~~----~~v~~~~grvp 83 (316)
T 3e96_A 30 IDWHHYKETVD-------RIVDNGIDVIVPCGNTSE----FY-----------ALSLEEAKEEVR----RTVEYVHGRAL 83 (316)
T ss_dssp BCHHHHHHHHH-------HHHTTTCCEECTTSGGGT----GG-----------GSCHHHHHHHHH----HHHHHHTTSSE
T ss_pred CCHHHHHHHHH-------HHHHcCCCEEEeCccccC----cc-----------cCCHHHHHHHHH----HHHHHhCCCCc
Confidence 44444545544 456799999998776542 11 013456665544 444444433 6
Q ss_pred EEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhC
Q 025135 94 VGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQ 173 (257)
Q Consensus 94 v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~ 173 (257)
|.+=++. +.++++++++..++.| +|.+-+..|.|..+ .........+.|.++++
T Consensus 84 ViaGvg~-----------~t~~ai~la~~A~~~G------adavlv~~P~y~~~---------s~~~l~~~f~~va~a~~ 137 (316)
T 3e96_A 84 VVAGIGY-----------ATSTAIELGNAAKAAG------ADAVMIHMPIHPYV---------TAGGVYAYFRDIIEALD 137 (316)
T ss_dssp EEEEECS-----------SHHHHHHHHHHHHHHT------CSEEEECCCCCSCC---------CHHHHHHHHHHHHHHHT
T ss_pred EEEEeCc-----------CHHHHHHHHHHHHhcC------CCEEEEcCCCCCCC---------CHHHHHHHHHHHHHhCC
Confidence 6544431 3678899999999999 88887776655321 22333455677888889
Q ss_pred CcEEEe--CC-CCHHHHHHHHHcCCCcEEEechHHhhCchHHHHHHc
Q 025135 174 GTFICS--GG-FTRELGIQALAEDGADLVAYGRLFISNPDLVLRFKL 217 (257)
Q Consensus 174 ~pvi~~--G~-it~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~ 217 (257)
+||+.- |. ++++...++.+... +|++= -.-.|.....++.+
T Consensus 138 lPiilYn~g~~l~~~~~~~La~~pn--IvgiK-dssgd~~~~~~~~~ 181 (316)
T 3e96_A 138 FPSLVYFKDPEISDRVLVDLAPLQN--LVGVK-YAINDLPRFAKVVR 181 (316)
T ss_dssp SCEEEEECCTTSCTHHHHHHTTCTT--EEEEE-ECCCCHHHHHHHHT
T ss_pred CCEEEEeCCCCCCHHHHHHHHcCCC--EEEEE-eCCCCHHHHHHHHH
Confidence 997653 32 48888777764333 33331 11224444555553
No 329
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=95.55 E-value=0.74 Score=40.19 Aligned_cols=138 Identities=12% Similarity=0.069 Sum_probs=86.3
Q ss_pred HHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCC--
Q 025135 30 AALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDA-- 107 (257)
Q Consensus 30 AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~-- 107 (257)
.+++|.++||+-|-|-++| =++|...+...++++..++. |- .|-.-|..-.+-.+.
T Consensus 95 ~i~~ai~~GFtSVMiDgS~--------------------~p~eeNi~~Tk~vv~~ah~~-gv-sVEaElG~vgG~Ed~~~ 152 (288)
T 3q94_A 95 KCKEAIDAGFTSVMIDASH--------------------HPFEENVETTKKVVEYAHAR-NV-SVEAELGTVGGQEDDVI 152 (288)
T ss_dssp HHHHHHHHTCSEEEECCTT--------------------SCHHHHHHHHHHHHHHHHTT-TC-EEEEEESBCBCSCSSCG
T ss_pred HHHHHHHcCCCeEEEeCCC--------------------CCHHHHHHHHHHHHHHHHHc-CC-eEEEEeeeeccccCCcC
Confidence 3456778899999988877 14577789999999988753 32 343344321111111
Q ss_pred ---CCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCC--C
Q 025135 108 ---TDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGG--F 182 (257)
Q Consensus 108 ---~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~--i 182 (257)
....+.+++.++++ +.| +|.+-+.-++.++.+. +. +....+.+++|++.+++|++.=|+ +
T Consensus 153 ~~~~~yT~Peea~~Fv~---~Tg------vD~LAvaiGt~HG~Y~---~~---p~Ld~~~L~~I~~~v~vpLVlHGgSG~ 217 (288)
T 3q94_A 153 AEGVIYADPAECKHLVE---ATG------IDCLAPALGSVHGPYK---GE---PNLGFAEMEQVRDFTGVPLVLHGGTGI 217 (288)
T ss_dssp GGGCBCCCHHHHHHHHH---HHC------CSEEEECSSCBSSCCS---SS---CCCCHHHHHHHHHHHCSCEEECCCTTC
T ss_pred CccccCCCHHHHHHHHH---HHC------CCEEEEEcCcccCCcC---CC---CccCHHHHHHHHHhcCCCEEEeCCCCC
Confidence 01234666666654 668 8888876655443321 11 112346778899999999777665 4
Q ss_pred CHHHHHHHHHcCCCcEEEechHH
Q 025135 183 TRELGIQALAEDGADLVAYGRLF 205 (257)
Q Consensus 183 t~~~a~~~l~~g~~D~V~igR~~ 205 (257)
..++..++++.| +-=|=++.-+
T Consensus 218 ~~e~i~~ai~~G-v~KiNi~Tdl 239 (288)
T 3q94_A 218 PTADIEKAISLG-TSKINVNTEN 239 (288)
T ss_dssp CHHHHHHHHHTT-EEEEEECHHH
T ss_pred CHHHHHHHHHcC-CeEEEEChHH
Confidence 678899999998 4445555443
No 330
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=95.52 E-value=0.55 Score=39.82 Aligned_cols=71 Identities=13% Similarity=0.137 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCC-cEEEeCCCCHHH-----
Q 025135 113 LGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQG-TFICSGGFTREL----- 186 (257)
Q Consensus 113 ~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~-pvi~~G~it~~~----- 186 (257)
.+...++++...+.| ++-+.++. . ....+|+..+. .++++.||.++.
T Consensus 143 ~~~v~~~A~~a~~~g------~~GvV~s~------------------~---e~~~ir~~~~~~fl~vtPGIr~~g~~~~d 195 (239)
T 3tr2_A 143 PDIVCRMATLAKSAG------LDGVVCSA------------------Q---EAALLRKQFDRNFLLVTPGIRLETDEKGD 195 (239)
T ss_dssp HHHHHHHHHHHHHHT------CCEEECCH------------------H---HHHHHHTTCCTTSEEEECCBC--------
T ss_pred HHHHHHHHHHHHHcC------CCEEEECc------------------h---hHHHHHHhcCCCcEEECCCcCCCCCCcCc
Confidence 355667888777888 66554321 1 12447776653 366777775432
Q ss_pred ------HHHHHHcCCCcEEEechHHhhCchH
Q 025135 187 ------GIQALAEDGADLVAYGRLFISNPDL 211 (257)
Q Consensus 187 ------a~~~l~~g~~D~V~igR~~iadP~l 211 (257)
..++++.| +|++.+||+....+|-
T Consensus 196 Q~rv~t~~~~~~aG-ad~lVvGr~I~~a~dp 225 (239)
T 3tr2_A 196 QKRVMTPRAAIQAG-SDYLVIGRPITQSTDP 225 (239)
T ss_dssp --CCBCHHHHHHHT-CSEEEECHHHHTSSSH
T ss_pred ccccCCHHHHHHcC-CCEEEEChHHhCCCCH
Confidence 55778887 9999999999975543
No 331
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=95.52 E-value=0.24 Score=43.79 Aligned_cols=124 Identities=14% Similarity=0.133 Sum_probs=76.4
Q ss_pred HHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCCCC
Q 025135 27 YRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAIDHL 105 (257)
Q Consensus 27 f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~~~ 105 (257)
+.+-+....+.|.|||-+.+..|-. .+ =|.+.|.++ ++.++++++.. +|.+=++.
T Consensus 34 l~~lv~~li~~Gv~gl~v~GtTGE~----~~-----------Ls~~Er~~v----~~~~~~~~~grvpviaGvg~----- 89 (318)
T 3qfe_A 34 QERYYAYLARSGLTGLVILGTNAEA----FL-----------LTREERAQL----IATARKAVGPDFPIMAGVGA----- 89 (318)
T ss_dssp HHHHHHHHHTTTCSEEEESSGGGTG----GG-----------SCHHHHHHH----HHHHHHHHCTTSCEEEECCC-----
T ss_pred HHHHHHHHHHcCCCEEEeCccccCh----hh-----------CCHHHHHHH----HHHHHHHhCCCCcEEEeCCC-----
Confidence 3333445567899999998766421 10 134566655 44555555443 66654432
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEE------e
Q 025135 106 DATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFIC------S 179 (257)
Q Consensus 106 ~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~------~ 179 (257)
.+..+++++++..++.| +|.+-+..|.|.... ..........+.|.+++++||+. +
T Consensus 90 -----~~t~~ai~la~~a~~~G------adavlv~~P~y~~kp-------~~~~~l~~~f~~ia~a~~lPiilYn~P~~t 151 (318)
T 3qfe_A 90 -----HSTRQVLEHINDASVAG------ANYVLVLPPAYFGKA-------TTPPVIKSFFDDVSCQSPLPVVIYNFPGVC 151 (318)
T ss_dssp -----SSHHHHHHHHHHHHHHT------CSEEEECCCCC---C-------CCHHHHHHHHHHHHHHCSSCEEEEECCC--
T ss_pred -----CCHHHHHHHHHHHHHcC------CCEEEEeCCcccCCC-------CCHHHHHHHHHHHHhhCCCCEEEEeCCccc
Confidence 35788999999999999 888887777553210 01223344567788888999764 1
Q ss_pred -CC-CCHHHHHHHHH
Q 025135 180 -GG-FTRELGIQALA 192 (257)
Q Consensus 180 -G~-it~~~a~~~l~ 192 (257)
|- ++++...++.+
T Consensus 152 ~g~~l~~~~~~~La~ 166 (318)
T 3qfe_A 152 NGIDLDSDMITTIAR 166 (318)
T ss_dssp --CCCCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHh
Confidence 32 37888888876
No 332
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=95.52 E-value=0.14 Score=43.42 Aligned_cols=48 Identities=19% Similarity=0.196 Sum_probs=36.5
Q ss_pred HHHHHHHHHHh-CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCchH
Q 025135 162 AQLLRTWRRSY-QGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNPDL 211 (257)
Q Consensus 162 ~~~~~~ir~~~-~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP~l 211 (257)
..+++.++..+ ++|++.+||++++.+.+.++.| ++.+..|..+ .+|++
T Consensus 162 ~~~lkal~~p~p~ip~~ptGGI~~~n~~~~l~aG-a~~~vgGs~l-~~~~~ 210 (232)
T 4e38_A 162 ISMVKSLVGPYGDIRLMPTGGITPSNIDNYLAIP-QVLACGGTWM-VDKKL 210 (232)
T ss_dssp HHHHHHHHTTCTTCEEEEBSSCCTTTHHHHHTST-TBCCEEECGG-GCHHH
T ss_pred HHHHHHHHHHhcCCCeeeEcCCCHHHHHHHHHCC-CeEEEECchh-cChHH
Confidence 35677788776 5899999999999999999988 6666666554 34443
No 333
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=95.51 E-value=0.6 Score=41.07 Aligned_cols=128 Identities=13% Similarity=0.078 Sum_probs=80.9
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCe
Q 025135 14 ALQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADR 93 (257)
Q Consensus 14 ~lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~ 93 (257)
.+..+.++++++ ...+.|.|||-+.+..|- |.+ =|.+.|.++ ++.+++++|.-+
T Consensus 25 ~iD~~~l~~lv~-------~li~~Gv~Gl~v~GtTGE----~~~-----------Lt~~Er~~v----~~~~v~~~grvp 78 (313)
T 3dz1_A 25 KIDDVSIDRLTD-------FYAEVGCEGVTVLGILGE----APK-----------LDAAEAEAV----ATRFIKRAKSMQ 78 (313)
T ss_dssp CBCHHHHHHHHH-------HHHHTTCSEEEESTGGGT----GGG-----------SCHHHHHHH----HHHHHHHCTTSE
T ss_pred CcCHHHHHHHHH-------HHHHCCCCEEEeCccCcC----hhh-----------CCHHHHHHH----HHHHHHHcCCCc
Confidence 344444555554 456799999998876642 110 134566655 444455554447
Q ss_pred EEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhC
Q 025135 94 VGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQ 173 (257)
Q Consensus 94 v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~ 173 (257)
|.+=++. .+..+++++++..++.| +|.+-+..|.+. + .........+.|.++++
T Consensus 79 ViaGvg~----------~~t~~ai~la~~A~~~G------adavlv~~P~~~-~---------s~~~l~~~f~~va~a~~ 132 (313)
T 3dz1_A 79 VIVGVSA----------PGFAAMRRLARLSMDAG------AAGVMIAPPPSL-R---------TDEQITTYFRQATEAIG 132 (313)
T ss_dssp EEEECCC----------SSHHHHHHHHHHHHHHT------CSEEEECCCTTC-C---------SHHHHHHHHHHHHHHHC
T ss_pred EEEecCC----------CCHHHHHHHHHHHHHcC------CCEEEECCCCCC-C---------CHHHHHHHHHHHHHhCC
Confidence 7664442 35788999999999999 888877655321 1 22334455677888888
Q ss_pred --CcEEE------eCC-CCHHHHHHHHHc
Q 025135 174 --GTFIC------SGG-FTRELGIQALAE 193 (257)
Q Consensus 174 --~pvi~------~G~-it~~~a~~~l~~ 193 (257)
+||+. +|. ++++...++.++
T Consensus 133 ~~lPiilYn~P~~tg~~l~~~~~~~La~~ 161 (313)
T 3dz1_A 133 DDVPWVLQDYPLTLSVVMTPKVIRQIVMD 161 (313)
T ss_dssp TTSCEEEEECHHHHCCCCCHHHHHHHHHH
T ss_pred CCCcEEEEeCccccCcCCCHHHHHHHHHh
Confidence 99775 233 488888888753
No 334
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=95.51 E-value=0.04 Score=46.81 Aligned_cols=42 Identities=14% Similarity=0.003 Sum_probs=31.4
Q ss_pred HHhCCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCchH
Q 025135 170 RSYQGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNPDL 211 (257)
Q Consensus 170 ~~~~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP~l 211 (257)
..++.-|-++.|++.+....+..--.+.=|.||..++++--+
T Consensus 183 ~~lGL~VnAGHgL~y~Nv~~ia~ip~i~ElnIGHaiia~Al~ 224 (243)
T 1m5w_A 183 ASLGLKVNAGHGLTYHNVKAIAAIPEMHELNIGHAIIGRAVM 224 (243)
T ss_dssp HHTTCEEEEESSCCTTTHHHHHTCTTEEEEEECHHHHHHHHH
T ss_pred HHcCCEEecCCCCCHHHHHHHhhCCCCeEEccCHHHHHHHHH
Confidence 345677888888887776666555668889999999987644
No 335
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=95.43 E-value=0.48 Score=40.59 Aligned_cols=153 Identities=13% Similarity=0.095 Sum_probs=87.4
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCe
Q 025135 14 ALQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADR 93 (257)
Q Consensus 14 ~lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~ 93 (257)
.++...+++++++ ++.+.+.|+|.||+-.-+ |.. + .....+.+.+..+|+.+++.|
T Consensus 25 ~l~~~~~~e~~~~----~~~~~~~~~D~vElRvD~------------------l~~-~-~~~~~v~~~l~~lr~~~~~~P 80 (257)
T 2yr1_A 25 PVVGEDDRKVLRE----AEEVCRKQPDLLEWRADF------------------FRA-I-DDQERVLATANGLRNIAGEIP 80 (257)
T ss_dssp EECCSSHHHHHHH----HHHHHHSCCSEEEEEGGG------------------CTT-T-TCHHHHHHHHHHHHHHSSSCC
T ss_pred EecCCCHHHHHHH----HHHHhhcCCCEEEEEeec------------------ccc-c-CcHHHHHHHHHHHHHhccCCC
Confidence 3555566655543 455678899999986542 211 0 113568889999999987557
Q ss_pred EEEEEccCCCCCCCCC-CCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh
Q 025135 94 VGVRMSPAIDHLDATD-SDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY 172 (257)
Q Consensus 94 v~vrls~~~~~~~~~~-~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~ 172 (257)
|.+-++.. .+++.. ..+.+...++.+.+.+.|. ++||++.-. . .. ......+.. +..
T Consensus 81 iI~T~Rt~--~eGG~~~~~~~~~~~~ll~~~~~~g~-----~d~iDvEl~-~------------~~-~~~~l~~~~-~~~ 138 (257)
T 2yr1_A 81 ILFTIRSE--REGGQPIPLNEAEVRRLIEAICRSGA-----IDLVDYELA-Y------------GE-RIADVRRMT-EEC 138 (257)
T ss_dssp EEEECCCT--TTTCCCCSSCHHHHHHHHHHHHHHTC-----CSEEEEEGG-G------------TT-HHHHHHHHH-HHT
T ss_pred EEEEEeec--ccCCCCCCCCHHHHHHHHHHHHHcCC-----CCEEEEECC-C------------Ch-hHHHHHHHH-HhC
Confidence 66666532 223322 3456777888888888763 789987531 1 11 111222212 334
Q ss_pred CCcEEEe-CCC--CH--HHHHHHH---HcCCCcEEEechHHhhCchHH
Q 025135 173 QGTFICS-GGF--TR--ELGIQAL---AEDGADLVAYGRLFISNPDLV 212 (257)
Q Consensus 173 ~~pvi~~-G~i--t~--~~a~~~l---~~g~~D~V~igR~~iadP~l~ 212 (257)
+..||++ ..+ || ++..+.+ ++-+||+|=++...-..-|..
T Consensus 139 ~~kvI~S~Hdf~~tP~~~el~~~~~~~~~~gaDivKia~~a~s~~D~l 186 (257)
T 2yr1_A 139 SVWLVVSRHYFDGTPRKETLLADMRQAERYGADIAKVAVMPKSPEDVL 186 (257)
T ss_dssp TCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEEEEECCSSHHHHH
T ss_pred CCEEEEEecCCCCCcCHHHHHHHHHHHHhcCCCEEEEEeccCCHHHHH
Confidence 5667776 444 44 4433333 223499888887654444443
No 336
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=95.39 E-value=0.27 Score=42.77 Aligned_cols=124 Identities=12% Similarity=0.120 Sum_probs=77.3
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCe
Q 025135 14 ALQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADR 93 (257)
Q Consensus 14 ~lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~ 93 (257)
.+..+-++++++ ...+.|.|||-+.+..|-. . -=|.+.|.+ +++.++++++.
T Consensus 16 ~iD~~~l~~lv~-------~li~~Gv~gl~v~GtTGE~----~-----------~Ls~eEr~~----v~~~~~~~~~g-- 67 (288)
T 2nuw_A 16 KVNVDALKTHAK-------NLLEKGIDAIFVNGTTGLG----P-----------ALSKDEKRQ----NLNALYDVTHK-- 67 (288)
T ss_dssp CBCHHHHHHHHH-------HHHHTTCCEEEETSTTTTG----G-----------GSCHHHHHH----HHHHHTTTCSC--
T ss_pred CcCHHHHHHHHH-------HHHHcCCCEEEECccccCh----h-----------hCCHHHHHH----HHHHHHHHhCC--
Confidence 345555555555 4467999999988766421 1 012345554 45555565554
Q ss_pred EEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCccc-CCCcCCCCCCCchhHHHHHHHHHHHh
Q 025135 94 VGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTA-YGQTESGRPGTEDEEAQLLRTWRRSY 172 (257)
Q Consensus 94 v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ir~~~ 172 (257)
|.+=++. .+.++++++++..++.| +|.+-+..|.|.. + .........+.|.++.
T Consensus 68 ViaGvg~----------~~t~~ai~la~~A~~~G------adavlv~~P~y~~~~---------s~~~l~~~f~~va~a~ 122 (288)
T 2nuw_A 68 LIFQVGS----------LNLNDVMELVKFSNEMD------ILGVSSHSPYYFPRL---------PEKFLAKYYEEIARIS 122 (288)
T ss_dssp EEEECCC----------SCHHHHHHHHHHHHTSC------CSEEEECCCCSSCSC---------CHHHHHHHHHHHHHHC
T ss_pred eEEeeCC----------CCHHHHHHHHHHHHhcC------CCEEEEcCCcCCCCC---------CHHHHHHHHHHHHHhc
Confidence 4333332 35788999999999999 8888877776543 2 1233344556788888
Q ss_pred CCcEEE-e-----CC-CCHHHHHHH
Q 025135 173 QGTFIC-S-----GG-FTRELGIQA 190 (257)
Q Consensus 173 ~~pvi~-~-----G~-it~~~a~~~ 190 (257)
++||+. + |- ++++...++
T Consensus 123 ~lPiilYn~P~~tg~~l~~~~~~~L 147 (288)
T 2nuw_A 123 SHSLYIYNYPAATGYDIPPSILKSL 147 (288)
T ss_dssp CSCEEEEECHHHHSCCCCHHHHTTT
T ss_pred CCCEEEEECchHhCcCCCHHHHhcc
Confidence 999765 2 32 477776665
No 337
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=95.38 E-value=0.72 Score=39.60 Aligned_cols=137 Identities=11% Similarity=0.089 Sum_probs=78.2
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHh--CC-Ce--
Q 025135 19 EIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAI--GA-DR-- 93 (257)
Q Consensus 19 eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~v--g~-~~-- 93 (257)
||-.++..++ +.+.++|+|.|-+|+..| ...+...+++.++.. |. .+
T Consensus 67 DIpnTv~~a~---~~~~~~gad~vTVh~~~G-------------------------~~~~~aa~~~~~~~~~~g~~~~~l 118 (259)
T 3tfx_A 67 DIPNTVYNGA---KALAKLGITFTTVHALGG-------------------------SQMIKSAKDGLIAGTPAGHSVPKL 118 (259)
T ss_dssp SCHHHHHHHH---HHHHTTTCSEEEEEGGGC-------------------------HHHHHHHHHHHHHHSCTTSCCCEE
T ss_pred ccchHHHHHH---HHHHhcCCCEEEEcCCCC-------------------------HHHHHHHHHHHHHhcccCCCCceE
Confidence 4555555544 445678999999997653 123344444444331 32 22
Q ss_pred EEE-EEccCC--CC-CCCC-CCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHH
Q 025135 94 VGV-RMSPAI--DH-LDAT-DSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTW 168 (257)
Q Consensus 94 v~v-rls~~~--~~-~~~~-~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 168 (257)
++| .++... ++ .+.+ .....+....+++...++| ++-+-++ | . .+..+
T Consensus 119 i~Vt~lTS~~~~~l~~~~g~~~~~~e~v~~~A~~a~~~G------~dGvV~s-~-----------------~---e~~~i 171 (259)
T 3tfx_A 119 LAVTELTSISDDVLRNEQNCRLPMAEQVLSLAKMAKHSG------ADGVICS-P-----------------L---EVKKL 171 (259)
T ss_dssp EEECSCTTCCHHHHHHTSCBSSCHHHHHHHHHHHHHHTT------CCEEECC-G-----------------G---GHHHH
T ss_pred EEEEEeCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhC------CCEEEEC-H-----------------H---HHHHH
Confidence 344 444321 11 0111 1122345667888888888 6655432 1 1 13457
Q ss_pred HHHhCCc-EEEeCCCCHH-----------HHHHHHHcCCCcEEEechHHhhCchH
Q 025135 169 RRSYQGT-FICSGGFTRE-----------LGIQALAEDGADLVAYGRLFISNPDL 211 (257)
Q Consensus 169 r~~~~~p-vi~~G~it~~-----------~a~~~l~~g~~D~V~igR~~iadP~l 211 (257)
|+.++.- ++++.||.++ ...++++.| +|++.+||+....+|-
T Consensus 172 r~~~~~~f~~vtPGIr~~g~~~gDQ~Rv~T~~~a~~aG-ad~iVvGr~I~~a~dp 225 (259)
T 3tfx_A 172 HENIGDDFLYVTPGIRPAGNAKDDQSRVATPKMAKEWG-SSAIVVGRPITLASDP 225 (259)
T ss_dssp HHHHCSSSEEEECCCCCC-----------CHHHHHHTT-CSEEEECHHHHTSSSH
T ss_pred HhhcCCccEEEcCCcCCCCCCcCCccccCCHHHHHHcC-CCEEEEChHHhCCCCH
Confidence 7777543 6677777432 166788887 9999999999975543
No 338
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=95.37 E-value=0.19 Score=44.23 Aligned_cols=138 Identities=10% Similarity=0.096 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCC-chhhHhhHHHHHHHHHHHHh-CCC-eEEEEEccCC
Q 025135 26 QYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGG-SIENRCRFLMQLVREVIVAI-GAD-RVGVRMSPAI 102 (257)
Q Consensus 26 ~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGG-s~enR~r~~~eiv~aiR~~v-g~~-~v~vrls~~~ 102 (257)
+..+.+++..++|..||.|-..-+ | +|...-+| .+.....+ .+-|++.|++. +++ .|..|.-...
T Consensus 99 ~v~~~v~~l~~aGaagv~iEDq~~--------~---k~cGh~~gk~l~~~~e~-~~ri~Aa~~A~~~~~~~I~ARTDa~~ 166 (298)
T 3eoo_A 99 NIARTIRSFIKAGVGAVHLEDQVG--------Q---KRCGHRPGKECVPAGEM-VDRIKAAVDARTDETFVIMARTDAAA 166 (298)
T ss_dssp HHHHHHHHHHHTTCSEEEEECBCC--------C---CCTTCCCCCCBCCHHHH-HHHHHHHHHHCSSTTSEEEEEECTHH
T ss_pred HHHHHHHHHHHhCCeEEEECCCCC--------C---cccCCCCCCeecCHHHH-HHHHHHHHHhccCCCeEEEEeehhhh
Confidence 345566777889999999976541 2 34433333 23333333 33455555554 344 4777875421
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEe---
Q 025135 103 DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICS--- 179 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~--- 179 (257)
....+++++=++...++| .|.|-+... . ..+.++++.+.+++||++|
T Consensus 167 -------~~gldeai~Ra~ay~~AG------AD~if~~~~---------------~--~~ee~~~~~~~~~~Pl~~n~~~ 216 (298)
T 3eoo_A 167 -------AEGIDAAIERAIAYVEAG------ADMIFPEAM---------------K--TLDDYRRFKEAVKVPILANLTE 216 (298)
T ss_dssp -------HHHHHHHHHHHHHHHHTT------CSEEEECCC---------------C--SHHHHHHHHHHHCSCBEEECCT
T ss_pred -------hcCHHHHHHHHHhhHhcC------CCEEEeCCC---------------C--CHHHHHHHHHHcCCCeEEEecc
Confidence 124678888899999999 676655332 0 1345677888888998665
Q ss_pred CCCCHH-HHHHHHHcCCCcEEEechHHh
Q 025135 180 GGFTRE-LGIQALAEDGADLVAYGRLFI 206 (257)
Q Consensus 180 G~it~~-~a~~~l~~g~~D~V~igR~~i 206 (257)
++-+|. ..+++-+-| +..|.++-.++
T Consensus 217 ~g~tp~~~~~eL~~lG-v~~v~~~~~~~ 243 (298)
T 3eoo_A 217 FGSTPLFTLDELKGAN-VDIALYCCGAY 243 (298)
T ss_dssp TSSSCCCCHHHHHHTT-CCEEEECSHHH
T ss_pred CCCCCCCCHHHHHHcC-CeEEEEchHHH
Confidence 332321 234444445 99999997666
No 339
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=95.32 E-value=0.094 Score=44.38 Aligned_cols=45 Identities=11% Similarity=0.126 Sum_probs=34.8
Q ss_pred HHHHHHhC-CcEEEeCCCCHHHH-----------HHHHHcCCCcEEEechHHhhCchH
Q 025135 166 RTWRRSYQ-GTFICSGGFTRELG-----------IQALAEDGADLVAYGRLFISNPDL 211 (257)
Q Consensus 166 ~~ir~~~~-~pvi~~G~it~~~a-----------~~~l~~g~~D~V~igR~~iadP~l 211 (257)
+.+|+..+ .++++.||++++.+ .++++.| +|++.+||+.+..||.
T Consensus 167 ~~lr~~~~~~~i~v~gGI~~~~~~~~dq~rv~tp~~a~~aG-ad~iVvGr~I~~a~dp 223 (239)
T 1dbt_A 167 KAIYQAVSPSFLTVTPGIRMSEDAANDQVRVATPAIAREKG-SSAIVVGRSITKAEDP 223 (239)
T ss_dssp HHHTTTSCTTCEEEECCBCCTTSCCTTCSSCBCHHHHHHTT-CSEEEECHHHHTSSCH
T ss_pred HHHHHhcCCCcEEEeCCcCCCCCCccceeccCCHHHHHHcC-CCEEEEChhhcCCCCH
Confidence 44666554 56888999977666 7888877 9999999999976653
No 340
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=95.31 E-value=0.13 Score=47.51 Aligned_cols=68 Identities=6% Similarity=0.004 Sum_probs=49.5
Q ss_pred cHHHHH-HHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC--CHHHHH
Q 025135 112 PLGLGL-AVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF--TRELGI 188 (257)
Q Consensus 112 ~~~~~~-~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i--t~~~a~ 188 (257)
+.++++ .+++.+++.+ +.||+ +|- .+..+...+.+++..++||++-..+ +++++.
T Consensus 274 t~~eai~~~~~~l~~y~------i~~iE--dPl--------------~~dD~~g~~~l~~~~~ipI~gDE~~vt~~~~~~ 331 (436)
T 2al1_A 274 TGPQLADLYHSLMKRYP------IVSIE--DPF--------------AEDDWEAWSHFFKTAGIQIVADDLTVTNPKRIA 331 (436)
T ss_dssp CHHHHHHHHHHHHHHSC------EEEEE--CCS--------------CTTCHHHHHHHHTTCCSEEEESTTTTTCHHHHH
T ss_pred CHHHHHHHHHHHHHhCC------cEEEE--CCC--------------CCcCHHHHHHHHhcCCCeEEECCcccCCHHHHH
Confidence 445555 4577788888 88886 652 2233456677888888999755543 599999
Q ss_pred HHHHcCCCcEEEe
Q 025135 189 QALAEDGADLVAY 201 (257)
Q Consensus 189 ~~l~~g~~D~V~i 201 (257)
++|+.+.||.|.+
T Consensus 332 ~~i~~~a~d~i~i 344 (436)
T 2al1_A 332 TAIEKKAADALLL 344 (436)
T ss_dssp HHHHTTCCSEEEE
T ss_pred HHHHhCCCCEEEe
Confidence 9999999999986
No 341
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=95.30 E-value=1.3 Score=38.92 Aligned_cols=160 Identities=13% Similarity=0.095 Sum_probs=88.3
Q ss_pred HHHHHHHHHcCCCEEEecc-cccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCC
Q 025135 28 RQAALNAIQAGFDGIEIHG-AHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLD 106 (257)
Q Consensus 28 ~~AA~~a~~aGfDgVEIh~-a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~ 106 (257)
.-.|+.+.++|||+|-+-+ +.+.-+. -|.+. .=+++. +...+++|.+.+.. ||.+.+.- +|
T Consensus 39 ~~sA~l~e~aG~dai~vs~~s~a~~~G---~pD~~------~vt~~e----m~~~~~~I~r~~~~-pviaD~d~--Gy-- 100 (305)
T 3ih1_A 39 AMAALVARNTGFLALYLSGAAYTASKG---LPDLG------IVTSTE----VAERARDLVRATDL-PVLVDIDT--GF-- 100 (305)
T ss_dssp HHHHHHHHHTTCSCEEECHHHHHHHHT---CCSSS------CSCHHH----HHHHHHHHHHHHCC-CEEEECTT--CS--
T ss_pred HHHHHHHHHcCCCEEEECcHHHHHhCC---CCCCC------cCCHHH----HHHHHHHHHHhcCC-CEEEECCC--CC--
Confidence 3478888999999999875 3221100 02211 113333 34455666666643 77776642 23
Q ss_pred CCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcc-cCCCcCCCC-CCCchhHHHHHHHHHHHhCCcEEEeCCC-C
Q 025135 107 ATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYT-AYGQTESGR-PGTEDEEAQLLRTWRRSYQGTFICSGGF-T 183 (257)
Q Consensus 107 ~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t 183 (257)
++ .+...+.++.++++| +..|++...... ..+. ..+. ..+.......++.++++ +.+++.+++- .
T Consensus 101 ---g~-~~~v~~~v~~l~~aG------aagv~iED~~~~krcGh-~~gk~l~~~~e~~~rI~Aa~~A-~~~~~I~ARtda 168 (305)
T 3ih1_A 101 ---GG-VLNVARTAVEMVEAK------VAAVQIEDQQLPKKCGH-LNGKKLVTTEELVQKIKAIKEV-APSLYIVARTDA 168 (305)
T ss_dssp ---SS-HHHHHHHHHHHHHTT------CSEEEEECBCSSCCTTC-TTCCCBCCHHHHHHHHHHHHHH-CTTSEEEEEECC
T ss_pred ---CC-HHHHHHHHHHHHHhC------CcEEEECCCCCCcccCC-CCCCcccCHHHHHHHHHHHHHc-CCCeEEEEeecc
Confidence 12 456778899999999 888998654321 1110 0000 00111222333334444 5665555554 2
Q ss_pred ---------HHHHHHHHHcCCCcEEEechHHhhCchHHHHHHcCCC
Q 025135 184 ---------RELGIQALAEDGADLVAYGRLFISNPDLVLRFKLNAP 220 (257)
Q Consensus 184 ---------~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~g~~ 220 (257)
.+.+..+.+.| +|.|.+= .+.+++..+++.+..+
T Consensus 169 ~~~~g~~~ai~Ra~ay~eAG-AD~i~~e--~~~~~~~~~~i~~~~~ 211 (305)
T 3ih1_A 169 RGVEGLDEAIERANAYVKAG-ADAIFPE--ALQSEEEFRLFNSKVN 211 (305)
T ss_dssp HHHHCHHHHHHHHHHHHHHT-CSEEEET--TCCSHHHHHHHHHHSC
T ss_pred ccccCHHHHHHHHHHHHHcC-CCEEEEc--CCCCHHHHHHHHHHcC
Confidence 23455566666 9999883 3457888888876543
No 342
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=95.30 E-value=0.32 Score=42.42 Aligned_cols=123 Identities=12% Similarity=0.153 Sum_probs=76.6
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCe
Q 025135 14 ALQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADR 93 (257)
Q Consensus 14 ~lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~ 93 (257)
.+..+.++++++ ...+.|.|||-+.+..|- |. -=|.+.|.+ +++.++++++.
T Consensus 16 ~iD~~~l~~lv~-------~li~~Gv~gl~~~GttGE----~~-----------~Ls~eEr~~----v~~~~~~~~~g-- 67 (293)
T 1w3i_A 16 RIDKEKLKIHAE-------NLIRKGIDKLFVNGTTGL----GP-----------SLSPEEKLE----NLKAVYDVTNK-- 67 (293)
T ss_dssp SBCHHHHHHHHH-------HHHHTTCCEEEESSTTTT----GG-----------GSCHHHHHH----HHHHHHTTCSC--
T ss_pred CcCHHHHHHHHH-------HHHHcCCCEEEECccccC----hh-----------hCCHHHHHH----HHHHHHHHcCC--
Confidence 345555555555 446799999998876532 11 012345554 45555666544
Q ss_pred EEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCccc-CCCcCCCCCCCchhHHHHHHHHHHHh
Q 025135 94 VGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTA-YGQTESGRPGTEDEEAQLLRTWRRSY 172 (257)
Q Consensus 94 v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ir~~~ 172 (257)
|.+=++. .+.++++++++..++.| +|.+-+..|.|.. + .........+.|.+++
T Consensus 68 viaGvg~----------~~t~~ai~la~~A~~~G------adavlv~~P~y~~~~---------s~~~l~~~f~~va~a~ 122 (293)
T 1w3i_A 68 IIFQVGG----------LNLDDAIRLAKLSKDFD------IVGIASYAPYYYPRM---------SEKHLVKYFKTLCEVS 122 (293)
T ss_dssp EEEECCC----------SCHHHHHHHHHHGGGSC------CSEEEEECCCSCSSC---------CHHHHHHHHHHHHHHC
T ss_pred EEEecCC----------CCHHHHHHHHHHHHhcC------CCEEEEcCCCCCCCC---------CHHHHHHHHHHHHhhC
Confidence 4333332 35788999999999999 8888877776643 2 1233344557788888
Q ss_pred CCcEEE-e-----CC-CCHHHHHH
Q 025135 173 QGTFIC-S-----GG-FTRELGIQ 189 (257)
Q Consensus 173 ~~pvi~-~-----G~-it~~~a~~ 189 (257)
++||+. + |- ++++...+
T Consensus 123 ~lPiilYn~P~~tg~~l~~~~~~~ 146 (293)
T 1w3i_A 123 PHPVYLYNYPTATGKDIDAKVAKE 146 (293)
T ss_dssp SSCEEEEECHHHHSCCCCHHHHHH
T ss_pred CCCEEEEECchhhCcCCCHHHHHh
Confidence 999765 2 32 47887666
No 343
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=95.29 E-value=0.38 Score=41.75 Aligned_cols=149 Identities=15% Similarity=0.145 Sum_probs=84.7
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCe
Q 025135 14 ALQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADR 93 (257)
Q Consensus 14 ~lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~ 93 (257)
.++...++++.++ ++.+.+.|+|.||+-.-+ +... +....+.+.+..+|+.++..|
T Consensus 45 ~l~~~~~~e~~~~----~~~~~~~gaD~VElRvD~------------------l~~~--~~~~~v~~~l~~lr~~~~~~P 100 (276)
T 3o1n_A 45 SLMGKTITDVKSE----ALAYREADFDILEWRVDH------------------FANV--TTAESVLEAAGAIREIITDKP 100 (276)
T ss_dssp EECCSSHHHHHHH----HHHHTTSCCSEEEEEGGG------------------CTTT--TCHHHHHHHHHHHHHHCCSSC
T ss_pred EeCCCCHHHHHHH----HHHHhhCCCCEEEEEecc------------------cccc--CcHHHHHHHHHHHHHhcCCCC
Confidence 3555555555544 334456899999986443 2110 123568899999999986667
Q ss_pred EEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHH---H
Q 025135 94 VGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWR---R 170 (257)
Q Consensus 94 v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir---~ 170 (257)
|.+-++.. .+++....+.+...++.+.+.+.|. ++||++.-. . .. ..++.+. +
T Consensus 101 iI~T~Rt~--~eGG~~~~~~~~~~~ll~~~l~~g~-----~dyIDvEl~-~-------------~~---~~~~~l~~~a~ 156 (276)
T 3o1n_A 101 LLFTFRSA--KEGGEQALTTGQYIDLNRAAVDSGL-----VDMIDLELF-T-------------GD---DEVKATVGYAH 156 (276)
T ss_dssp EEEECCBG--GGTCSBCCCHHHHHHHHHHHHHHTC-----CSEEEEEGG-G-------------CH---HHHHHHHHHHH
T ss_pred EEEEEEEh--hhCCCCCCCHHHHHHHHHHHHhcCC-----CCEEEEECc-C-------------CH---HHHHHHHHHHH
Confidence 66655532 1222222345677888888888873 789987521 0 11 1223332 3
Q ss_pred HhCCcEEEe-CCC--CH--HHHH----HHHHcCCCcEEEechHHhhCchH
Q 025135 171 SYQGTFICS-GGF--TR--ELGI----QALAEDGADLVAYGRLFISNPDL 211 (257)
Q Consensus 171 ~~~~pvi~~-G~i--t~--~~a~----~~l~~g~~D~V~igR~~iadP~l 211 (257)
..++.||++ ..+ || ++.. ++.+- +||+|=++...-.--|.
T Consensus 157 ~~~~kvI~S~Hdf~~tP~~~el~~~~~~~~~~-GaDIvKia~~a~s~~Dv 205 (276)
T 3o1n_A 157 QHNVAVIMSNHDFHKTPAAEEIVQRLRKMQEL-GADIPKIAVMPQTKADV 205 (276)
T ss_dssp HTTCEEEEEEEESSCCCCHHHHHHHHHHHHHT-TCSEEEEEECCSSHHHH
T ss_pred hCCCEEEEEeecCCCCcCHHHHHHHHHHHHHc-CCCEEEEEecCCChHHH
Confidence 346778876 444 43 3333 33333 48988777655443343
No 344
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=95.22 E-value=0.3 Score=42.49 Aligned_cols=142 Identities=15% Similarity=0.043 Sum_probs=74.6
Q ss_pred HHHHHcCCCEEEeccc-ccchhhhcCCCCcCCcCCCCCCch-hhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCCC
Q 025135 32 LNAIQAGFDGIEIHGA-HGYLIDQFLKDGINDRTDEYGGSI-ENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDATD 109 (257)
Q Consensus 32 ~~a~~aGfDgVEIh~a-~GyLl~qFlSp~~N~R~D~yGGs~-enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~ 109 (257)
...+++||.|| +|.. .|.+=.+|- + .+ |+++.|- ++++.||++-..+.+.+=.-
T Consensus 115 e~lk~~Gf~Gv-~N~ptvglidG~fr-------~-----~LEE~gm~~~-~eve~I~~A~~~gL~Ti~~v---------- 170 (286)
T 2p10_A 115 RELKEIGFAGV-QNFPTVGLIDGLFR-------Q-----NLEETGMSYA-QEVEMIAEAHKLDLLTTPYV---------- 170 (286)
T ss_dssp HHHHHHTCCEE-EECSCGGGCCHHHH-------H-----HHHHTTCCHH-HHHHHHHHHHHTTCEECCEE----------
T ss_pred HHHHHhCCceE-EECCCcccccchhh-------h-----hHhhcCCCHH-HHHHHHHHHHHCCCeEEEec----------
Confidence 45678999999 6543 444434441 1 12 2334443 34666666654432221111
Q ss_pred CCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHH----HHHHHh-CCcEEEeC-CC-
Q 025135 110 SDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLR----TWRRSY-QGTFICSG-GF- 182 (257)
Q Consensus 110 ~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ir~~~-~~pvi~~G-~i- 182 (257)
.+.+++ +.+.++| .|+|.++.|... -+....+.........+.++ .+++.- ++.|++.| +|
T Consensus 171 -~~~eeA----~amA~ag------pDiI~~h~glT~-gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~gGpIs 238 (286)
T 2p10_A 171 -FSPEDA----VAMAKAG------ADILVCHMGLTT-GGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHGGPIA 238 (286)
T ss_dssp -CSHHHH----HHHHHHT------CSEEEEECSCC----------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEESTTCC
T ss_pred -CCHHHH----HHHHHcC------CCEEEECCCCCC-CCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEecCCCCC
Confidence 234544 4456788 888877654211 11010111111111122222 233332 24455555 78
Q ss_pred CHHHHHHHHHcCC-CcEEEechHHhhCc
Q 025135 183 TRELGIQALAEDG-ADLVAYGRLFISNP 209 (257)
Q Consensus 183 t~~~a~~~l~~g~-~D~V~igR~~iadP 209 (257)
+++|+..+++... +|.+..+.++..=|
T Consensus 239 tpeDv~~~l~~t~G~~G~~gASsier~p 266 (286)
T 2p10_A 239 NPEDARFILDSCQGCHGFYGASSMERLP 266 (286)
T ss_dssp SHHHHHHHHHHCTTCCEEEESHHHHHHH
T ss_pred CHHHHHHHHhcCCCccEEEeehhhhcCC
Confidence 8999999999833 99999999999877
No 345
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=95.22 E-value=0.21 Score=45.01 Aligned_cols=92 Identities=15% Similarity=0.107 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCC
Q 025135 77 FLMQLVREVIVAIGADRVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPG 156 (257)
Q Consensus 77 ~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~ 156 (257)
-..+.|+.+|+.. ..++++-+... + .+.++.+.++| +++|++.... +
T Consensus 82 ~~~~~I~~vk~~~-~~pvga~ig~~----------~----~e~a~~l~eaG------ad~I~ld~a~----G-------- 128 (361)
T 3khj_A 82 SQVNEVLKVKNSG-GLRVGAAIGVN----------E----IERAKLLVEAG------VDVIVLDSAH----G-------- 128 (361)
T ss_dssp HHHHHHHHHHHTT-CCCCEEEECTT----------C----HHHHHHHHHTT------CSEEEECCSC----C--------
T ss_pred HHHHHHHHHHhcc-CceEEEEeCCC----------H----HHHHHHHHHcC------cCeEEEeCCC----C--------
Confidence 3456777777653 33677766532 2 45677888899 8999875321 0
Q ss_pred CchhHHHHHHHHHHHhCCcEEEeCCCCHHHHHHHHHcCCCcEEEec
Q 025135 157 TEDEEAQLLRTWRRSYQGTFICSGGFTRELGIQALAEDGADLVAYG 202 (257)
Q Consensus 157 ~~~~~~~~~~~ir~~~~~pvi~~G~it~~~a~~~l~~g~~D~V~ig 202 (257)
......+.++.+++.+++||++.+-.|+++++.+++.| +|+|.+|
T Consensus 129 ~~~~~~~~i~~i~~~~~~~Vivg~v~t~e~A~~l~~aG-aD~I~VG 173 (361)
T 3khj_A 129 HSLNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIENG-ADGIKVG 173 (361)
T ss_dssp SBHHHHHHHHHHHHHCCCEEEEEEECSHHHHHHHHHTT-CSEEEEC
T ss_pred CcHHHHHHHHHHHHhcCCcEEEccCCCHHHHHHHHHcC-cCEEEEe
Confidence 12233466778888888898874334899999999887 9999885
No 346
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=95.17 E-value=0.039 Score=46.51 Aligned_cols=69 Identities=17% Similarity=0.177 Sum_probs=48.3
Q ss_pred HHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCCCHH--HHHHHHHcC
Q 025135 117 LAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGFTRE--LGIQALAED 194 (257)
Q Consensus 117 ~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~it~~--~a~~~l~~g 194 (257)
..+++..+++| ++.+.++. ..+ ..++.+|+.++.-++++.||.++ +..++++.|
T Consensus 125 ~~~a~~a~~~g------~~GvV~sa---------------t~p---~e~~~ir~~~~~~~~vtPGI~~~g~tp~~a~~~G 180 (222)
T 4dbe_A 125 DYIKNVIREIS------PKGIVVGG---------------TKL---DHITQYRRDFEKMTIVSPGMGSQGGSYGDAVCAG 180 (222)
T ss_dssp HHHHHHHHHHC------CSEEEECT---------------TCH---HHHHHHHHHCTTCEEEECCBSTTSBCTTHHHHHT
T ss_pred HHHHHHHHHhC------CCEEEECC---------------CCH---HHHHHHHHhCCCCEEEcCCcccCccCHHHHHHcC
Confidence 56888888889 66654432 112 34566888776556778888655 456777777
Q ss_pred CCcEEEechHHhhCch
Q 025135 195 GADLVAYGRLFISNPD 210 (257)
Q Consensus 195 ~~D~V~igR~~iadP~ 210 (257)
+|++.+||+...-+|
T Consensus 181 -ad~iVVGR~I~~A~d 195 (222)
T 4dbe_A 181 -ADYEIIGRSIYNAGN 195 (222)
T ss_dssp -CSEEEECHHHHTSSS
T ss_pred -CCEEEECHHhcCCCC
Confidence 999999999997444
No 347
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=95.14 E-value=1.1 Score=39.16 Aligned_cols=137 Identities=13% Similarity=0.083 Sum_probs=84.3
Q ss_pred HHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccC---CCCCC
Q 025135 30 AALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPA---IDHLD 106 (257)
Q Consensus 30 AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~---~~~~~ 106 (257)
..++|.++||+-|-|-++| =++|...+...++++..++. |- .|-.-|..- ++..+
T Consensus 89 ~i~~ai~~GFtSVMiDgS~--------------------lp~eeNi~~Tk~vv~~ah~~-gv-sVEaElG~vgg~ed~~~ 146 (286)
T 1gvf_A 89 DIRRKVHAGVRSAMIDGSH--------------------FPFAENVKLVKSVVDFCHSQ-DC-SVEAELGRLGGVEDDMS 146 (286)
T ss_dssp HHHHHHHTTCCEEEECCTT--------------------SCHHHHHHHHHHHHHHHHHT-TC-EEEEEESCCC-------
T ss_pred HHHHHHHcCCCeEEECCCC--------------------CCHHHHHHHHHHHHHHHHHc-CC-EEEEEEeeccCcccCcc
Confidence 3456677888888887776 13577799999999998863 32 333334321 11100
Q ss_pred --C--CCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCC-
Q 025135 107 --A--TDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGG- 181 (257)
Q Consensus 107 --~--~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~- 181 (257)
. ....+.+++.++++ +.| +|.+-+.-++.++.+. + .+....+.+++|++.+++|++.=|+
T Consensus 147 ~~~~~~~~T~Peea~~Fv~---~Tg------vD~LAvaiGt~HG~Y~---~---~p~Ld~~~L~~I~~~~~vpLVlHGgS 211 (286)
T 1gvf_A 147 VDAESAFLTDPQEAKRFVE---LTG------VDSLAVAIGTAHGLYS---K---TPKIDFQRLAEIREVVDVPLVLHGAS 211 (286)
T ss_dssp ----CCSSCCHHHHHHHHH---HHC------CSEEEECSSCCSSCCS---S---CCCCCHHHHHHHHHHCCSCEEECCCT
T ss_pred cccccccCCCHHHHHHHHH---HHC------CCEEEeecCccccCcC---C---CCccCHHHHHHHHHhcCCCEEEECCC
Confidence 0 01244677766655 568 8888877665544331 1 1112346788899999999877665
Q ss_pred -CCHHHHHHHHHcCCCcEEEechH
Q 025135 182 -FTRELGIQALAEDGADLVAYGRL 204 (257)
Q Consensus 182 -it~~~a~~~l~~g~~D~V~igR~ 204 (257)
+..++..++++.| +-=|=++.-
T Consensus 212 G~~~e~i~~ai~~G-v~KiNi~Td 234 (286)
T 1gvf_A 212 DVPDEFVRRTIELG-VTKVNVATE 234 (286)
T ss_dssp TCCHHHHHHHHHTT-EEEEEECHH
T ss_pred CCCHHHHHHHHHCC-CeEEEEChH
Confidence 4678899999998 444444433
No 348
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=95.14 E-value=0.18 Score=46.67 Aligned_cols=68 Identities=4% Similarity=-0.042 Sum_probs=49.3
Q ss_pred cHHHH-HHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC--CHHHHH
Q 025135 112 PLGLG-LAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF--TRELGI 188 (257)
Q Consensus 112 ~~~~~-~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i--t~~~a~ 188 (257)
+.+++ ..+++.+++.+ +.||+ +|- .+..+...+.+++..++||++-..+ +++++.
T Consensus 271 t~~e~~~~~~~ll~~y~------i~~IE--dPl--------------~~dD~~g~~~L~~~~~ipI~gDE~~vt~~~~~~ 328 (439)
T 2akz_A 271 TGDQLGALYQDFVRDYP------VVSIE--DPF--------------DQDDWAAWSKFTANVGIQIVGDDLTVTNPKRIE 328 (439)
T ss_dssp CHHHHHHHHHHHHHHSC------EEEEE--CCS--------------CTTCHHHHHHHHHTCSSEEEESTTTTTCHHHHH
T ss_pred CHHHHHHHHHHHHHhCC------CcEEE--CCC--------------CcccHHHHHHHHhCCCCEEEeCCCccCCHHHHH
Confidence 34544 45577788888 88886 652 2223456677888888998755443 799999
Q ss_pred HHHHcCCCcEEEe
Q 025135 189 QALAEDGADLVAY 201 (257)
Q Consensus 189 ~~l~~g~~D~V~i 201 (257)
+.|+.+.||.|.+
T Consensus 329 ~~i~~~a~d~i~i 341 (439)
T 2akz_A 329 RAVEEKACNCLLL 341 (439)
T ss_dssp HHHHTTCCSEEEE
T ss_pred HHHHhCCCCEEEe
Confidence 9999999999987
No 349
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=95.04 E-value=0.2 Score=41.15 Aligned_cols=80 Identities=10% Similarity=0.055 Sum_probs=57.9
Q ss_pred cHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEE-eCCC-CHHHHHH
Q 025135 112 PLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFIC-SGGF-TRELGIQ 189 (257)
Q Consensus 112 ~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~-~G~i-t~~~a~~ 189 (257)
+.++..++++.+.+.| +++|++.... +.....++.+++.++++++. .|.+ +.+.++.
T Consensus 17 d~~~~~~~~~~~~~~G------~~~i~l~~~~---------------~~~~~~i~~i~~~~~~~l~vg~g~~~~~~~i~~ 75 (212)
T 2v82_A 17 TPDEALAHVGAVIDAG------FDAVEIPLNS---------------PQWEQSIPAIVDAYGDKALIGAGTVLKPEQVDA 75 (212)
T ss_dssp CHHHHHHHHHHHHHHT------CCEEEEETTS---------------TTHHHHHHHHHHHHTTTSEEEEECCCSHHHHHH
T ss_pred CHHHHHHHHHHHHHCC------CCEEEEeCCC---------------hhHHHHHHHHHHhCCCCeEEEeccccCHHHHHH
Confidence 4677888999999999 8999986531 11234566677777887554 4556 8888999
Q ss_pred HHHcCCCcEEEechHHhhCchHHHHHH
Q 025135 190 ALAEDGADLVAYGRLFISNPDLVLRFK 216 (257)
Q Consensus 190 ~l~~g~~D~V~igR~~iadP~l~~k~~ 216 (257)
+++.| +|+|.++- .++++.+..+
T Consensus 76 a~~~G-ad~V~~~~---~~~~~~~~~~ 98 (212)
T 2v82_A 76 LARMG-CQLIVTPN---IHSEVIRRAV 98 (212)
T ss_dssp HHHTT-CCEEECSS---CCHHHHHHHH
T ss_pred HHHcC-CCEEEeCC---CCHHHHHHHH
Confidence 99887 99998775 3566765554
No 350
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=95.00 E-value=0.55 Score=40.96 Aligned_cols=149 Identities=7% Similarity=-0.050 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHh-CCC-eEEEEEccCC
Q 025135 25 DQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAI-GAD-RVGVRMSPAI 102 (257)
Q Consensus 25 ~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~v-g~~-~v~vrls~~~ 102 (257)
++..+.+++..++|..||.|-.+. ..+|...-.|.+-.. .-..+.|++++++- +.+ .|.-|... .
T Consensus 97 ~~~~~~v~~l~~aGa~gv~iED~~-----------~pKrcgh~~gkl~~~-~e~~~~I~aa~~a~~~~~~~i~aRtda-a 163 (287)
T 3b8i_A 97 LNVMRTVVELERAGIAALTIEDTL-----------LPAQFGRKSTDLICV-EEGVGKIRAALEARVDPALTIIARTNA-E 163 (287)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECBC-----------CSCCTTTCTTCBCCH-HHHHHHHHHHHHHCCSTTSEEEEEEET-T
T ss_pred HHHHHHHHHHHHhCCeEEEEcCCC-----------CccccCCCCCCccCH-HHHHHHHHHHHHcCCCCCcEEEEechh-h
Confidence 345566777788999999997663 123333333332222 23445566666653 223 46666542 1
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEe-CC
Q 025135 103 DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICS-GG 181 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~-G~ 181 (257)
....+++++=++.++++| .|.|-+... + ..+.++.|.+.+++|++.+ ++
T Consensus 164 -------~~gl~~ai~Ra~ay~eAG------Ad~i~~e~~---------------~--~~~~~~~i~~~~~~P~ii~~~g 213 (287)
T 3b8i_A 164 -------LIDVDAVIQRTLAYQEAG------ADGICLVGV---------------R--DFAHLEAIAEHLHIPLMLVTYG 213 (287)
T ss_dssp -------TSCHHHHHHHHHHHHHTT------CSEEEEECC---------------C--SHHHHHHHHTTCCSCEEEECTT
T ss_pred -------hcCHHHHHHHHHHHHHcC------CCEEEecCC---------------C--CHHHHHHHHHhCCCCEEEeCCC
Confidence 124788899999999999 666654331 1 1245677888999997754 33
Q ss_pred CCHH-HHHHHHHcCCCcEEEechHHhh--CchHHHHHHc
Q 025135 182 FTRE-LGIQALAEDGADLVAYGRLFIS--NPDLVLRFKL 217 (257)
Q Consensus 182 it~~-~a~~~l~~g~~D~V~igR~~ia--dP~l~~k~~~ 217 (257)
-++. ..+++-+-| +..|.++-.++. .....+.+++
T Consensus 214 ~~~~~~~~eL~~lG-v~~v~~~~~~~raa~~a~~~~l~~ 251 (287)
T 3b8i_A 214 NPQLRDDARLARLG-VRVVVNGHAAYFAAIKATYDCLRE 251 (287)
T ss_dssp CGGGCCHHHHHHTT-EEEEECCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHcC-CcEEEEChHHHHHHHHHHHHHHHH
Confidence 2322 234444445 999999865551 1125555554
No 351
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=94.95 E-value=0.46 Score=39.07 Aligned_cols=121 Identities=15% Similarity=0.065 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeE-EEEEccCCCC
Q 025135 26 QYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRV-GVRMSPAIDH 104 (257)
Q Consensus 26 ~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v-~vrls~~~~~ 104 (257)
...+.|+.+.++|++++.+. + .+.+++||+.++. |+ ++.-. ++
T Consensus 24 ~~~~~a~~~~~~Ga~~i~~~------------------------~--------~~~i~~i~~~~~~-pv~~~~~~---~~ 67 (223)
T 1y0e_A 24 IMSKMALAAYEGGAVGIRAN------------------------T--------KEDILAIKETVDL-PVIGIVKR---DY 67 (223)
T ss_dssp HHHHHHHHHHHHTCSEEEEE------------------------S--------HHHHHHHHHHCCS-CEEEECBC---CC
T ss_pred cHHHHHHHHHHCCCeeeccC------------------------C--------HHHHHHHHHhcCC-CEEeeecc---CC
Confidence 44566677788999999652 0 2568889988754 54 32211 11
Q ss_pred CCC--CCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC
Q 025135 105 LDA--TDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF 182 (257)
Q Consensus 105 ~~~--~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i 182 (257)
.+. .-..+.+ -++.+.+.| +++++++...... +.....+.++.+++.++...++.+-.
T Consensus 68 ~~~~~~i~~~~~----~i~~~~~~G------ad~v~l~~~~~~~----------p~~~~~~~i~~~~~~~~~~~v~~~~~ 127 (223)
T 1y0e_A 68 DHSDVFITATSK----EVDELIESQ------CEVIALDATLQQR----------PKETLDELVSYIRTHAPNVEIMADIA 127 (223)
T ss_dssp TTCCCCBSCSHH----HHHHHHHHT------CSEEEEECSCSCC----------SSSCHHHHHHHHHHHCTTSEEEEECS
T ss_pred CccccccCCcHH----HHHHHHhCC------CCEEEEeeecccC----------cccCHHHHHHHHHHhCCCceEEecCC
Confidence 111 0011222 234456788 8888876432111 10122456777888763223333444
Q ss_pred CHHHHHHHHHcCCCcEEEech
Q 025135 183 TRELGIQALAEDGADLVAYGR 203 (257)
Q Consensus 183 t~~~a~~~l~~g~~D~V~igR 203 (257)
|++++.++.+.| +|+|+++-
T Consensus 128 t~~e~~~~~~~G-~d~i~~~~ 147 (223)
T 1y0e_A 128 TVEEAKNAARLG-FDYIGTTL 147 (223)
T ss_dssp SHHHHHHHHHTT-CSEEECTT
T ss_pred CHHHHHHHHHcC-CCEEEeCC
Confidence 899999888877 99998753
No 352
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=94.92 E-value=0.065 Score=46.25 Aligned_cols=41 Identities=10% Similarity=0.025 Sum_probs=28.9
Q ss_pred HhCCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCchH
Q 025135 171 SYQGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNPDL 211 (257)
Q Consensus 171 ~~~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP~l 211 (257)
.++.-|-++.|++.+....+-.--.+.=|.||..++++--+
T Consensus 212 ~lGL~VnAGHGL~y~Nv~~ia~ip~i~ElnIGHaiIa~Al~ 252 (278)
T 3gk0_A 212 ALGLKVNAGHGLHYTNVQAIAALPGIAELNIGHAIVAHAVF 252 (278)
T ss_dssp HTTCEEEECTTCCTTTHHHHHTCTTEEEEEECHHHHHHHHH
T ss_pred HcCCEEecCCCCCHHHHHHHHhCCCCeEEecCHHHHHHHHH
Confidence 35666777778876665544344458889999999998644
No 353
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=94.84 E-value=1 Score=37.87 Aligned_cols=54 Identities=11% Similarity=0.087 Sum_probs=37.1
Q ss_pred HHHHHHHHHh-CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCchHHHHHH
Q 025135 163 QLLRTWRRSY-QGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNPDLVLRFK 216 (257)
Q Consensus 163 ~~~~~ir~~~-~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~ 216 (257)
...+.+|+.. +++++..|++++.++.+.+..-++|.+.+|.+++.-+++.+.++
T Consensus 165 ~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~~vDG~LVG~a~l~a~~~~~~i~ 219 (225)
T 1hg3_A 165 NTVELVKKVNPEVKVLCGAGISTGEDVKKAIELGTVGVLLASGVTKAKDPEKAIW 219 (225)
T ss_dssp HHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTCSSHHHHHH
T ss_pred HHHHHHHhccCCCEEEEeCCCCcHHHHHHHHhCCCCEEEeCHHHHCCcCHHHHHH
Confidence 3344455543 36688888995544444445556999999999999888776554
No 354
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=94.81 E-value=0.62 Score=38.48 Aligned_cols=95 Identities=11% Similarity=-0.003 Sum_probs=56.3
Q ss_pred hhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCC
Q 025135 75 CRFLMQLVREVIVAIGADRVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGR 154 (257)
Q Consensus 75 ~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~ 154 (257)
..+-.++|+++|+..++.+|.+-+... + .+ + .+++.+.++| ++++.+|.-.
T Consensus 43 ~~~G~~~i~~lr~~~~~~~i~ld~~l~----d----~p-~---~~~~~~~~aG------ad~i~vh~~~----------- 93 (218)
T 3jr2_A 43 FAEGMKAVSTLRHNHPNHILVCDMKTT----D----GG-A---ILSRMAFEAG------ADWITVSAAA----------- 93 (218)
T ss_dssp HHHTTHHHHHHHHHCTTSEEEEEEEEC----S----CH-H---HHHHHHHHHT------CSEEEEETTS-----------
T ss_pred HhcCHHHHHHHHHhCCCCcEEEEEeec----c----cH-H---HHHHHHHhcC------CCEEEEecCC-----------
Confidence 345568999999986444554433321 0 12 2 2568888999 8999887521
Q ss_pred CCCchhHHHHHHHHHHHhCCcEE--EeCCCCHHHHHHHHHcCCCcEEEec
Q 025135 155 PGTEDEEAQLLRTWRRSYQGTFI--CSGGFTRELGIQALAEDGADLVAYG 202 (257)
Q Consensus 155 ~~~~~~~~~~~~~ir~~~~~pvi--~~G~it~~~a~~~l~~g~~D~V~ig 202 (257)
........++.+++ .++.++ .-|-.|++++.++.+.| +|.+.+.
T Consensus 94 --~~~~~~~~~~~~~~-~g~~~~~d~l~~~T~~~~~~~~~~g-~d~v~~~ 139 (218)
T 3jr2_A 94 --HIATIAACKKVADE-LNGEIQIEIYGNWTMQDAKAWVDLG-ITQAIYH 139 (218)
T ss_dssp --CHHHHHHHHHHHHH-HTCEEEEECCSSCCHHHHHHHHHTT-CCEEEEE
T ss_pred --CHHHHHHHHHHHHH-hCCccceeeeecCCHHHHHHHHHcC-ccceeee
Confidence 11111233444554 355543 33445888888888775 9987653
No 355
>2ptz_A Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypanosoma brucei} SCOP: c.1.11.1 d.54.1.1 PDB: 2ptx_A 2pty_A* 2ptw_A 2pu0_A 2pu1_A* 1oep_A
Probab=94.71 E-value=0.13 Score=47.48 Aligned_cols=100 Identities=5% Similarity=0.020 Sum_probs=62.9
Q ss_pred HHH-HHHHHHHHhCC--C-eEEEEEccCCCCCC--C-C-C--C------CcHHHH-HHHHHHHHhcCCccCCceeEEEee
Q 025135 78 LMQ-LVREVIVAIGA--D-RVGVRMSPAIDHLD--A-T-D--S------DPLGLG-LAVIQGLNKLQIDQGAKLTYLHVT 140 (257)
Q Consensus 78 ~~e-iv~aiR~~vg~--~-~v~vrls~~~~~~~--~-~-~--~------~~~~~~-~~l~~~L~~~G~~~~~~vd~i~v~ 140 (257)
.++ ++++|| ++|. + .|.+-.+....|++ + . . . .+..++ ..+.+.|++.+ +.||+
T Consensus 224 ~l~~i~~Air-~~G~~g~v~l~vDan~~~~~~~~~~~y~~~~~~~~~~~~~a~~~~~~~~~~l~~y~------i~~iE-- 294 (432)
T 2ptz_A 224 PLPILMEAIE-EAGHRGKFAICMDCAASETYDEKKQQYNLTFKSPEPTWVTAEQLRETYCKWAHDYP------IVSIE-- 294 (432)
T ss_dssp HHHHHHHHHH-HTTCTTSCEEEEECCGGGGEETTTTEEETTTTSSSCCEECHHHHHHHHHHHHHHSC------EEEEE--
T ss_pred HHHHHHHHHH-HhCCcCCcEEEEECcccccccccCceeEeeccccccCCCCHHHHHHHHHHHHHhCC------ceEEE--
Confidence 455 588999 7887 5 46666553211211 0 0 0 0 022333 33447888888 88886
Q ss_pred CCCcccCCCcCCCCCCCchhHHHHHHHHHHHh--CCcEEEeCCC---CHHHHHHHHHcCCCcEEEe
Q 025135 141 QPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY--QGTFICSGGF---TRELGIQALAEDGADLVAY 201 (257)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~G~i---t~~~a~~~l~~g~~D~V~i 201 (257)
+|- .+..+...+.+++.+ ++|| +...+ +++++.++|+.+.||+|.+
T Consensus 295 dPl--------------~~~D~~g~~~l~~~~g~~ipI-~gDe~~v~~~~~~~~~i~~~a~d~i~i 345 (432)
T 2ptz_A 295 DPY--------------DQDDFAGFAGITEALKGKTQI-VGDDLTVTNTERIKMAIEKKACNSLLL 345 (432)
T ss_dssp CCS--------------CTTCHHHHHHHHHHTTTTSEE-EESTTTTTCHHHHHHHHHTTCCSEEEE
T ss_pred CCC--------------CcchHHHHHHHHHhcCCCCeE-EecCcccCCHHHHHHHHHcCCCCEEEe
Confidence 652 222345667788888 7888 44442 6999999999999999987
No 356
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=94.71 E-value=0.27 Score=42.04 Aligned_cols=79 Identities=11% Similarity=-0.014 Sum_probs=58.8
Q ss_pred HHHHHHHHHhcCCccCCceeEEEeeC-CCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHHHc
Q 025135 116 GLAVIQGLNKLQIDQGAKLTYLHVTQ-PRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQALAE 193 (257)
Q Consensus 116 ~~~l~~~L~~~G~~~~~~vd~i~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~~ 193 (257)
..++++..++.| ++.|++.. +.+. .+. ...++.+++.+++||+.-+.+ ++.+..++++.
T Consensus 67 p~~~A~~~~~~G------A~~isvlt~~~~f----------~G~---~~~l~~i~~~v~lPvl~kdfI~d~~qi~~a~~~ 127 (254)
T 1vc4_A 67 PVEAALAYARGG------ARAVSVLTEPHRF----------GGS---LLDLKRVREAVDLPLLRKDFVVDPFMLEEARAF 127 (254)
T ss_dssp HHHHHHHHHHTT------CSEEEEECCCSSS----------CCC---HHHHHHHHHHCCSCEEEESCCCSHHHHHHHHHT
T ss_pred HHHHHHHHHHcC------CCEEEEecchhhh----------ccC---HHHHHHHHHhcCCCEEECCcCCCHHHHHHHHHc
Confidence 467899999999 88888742 2211 011 245677899999999887777 88888888888
Q ss_pred CCCcEEEechHHhhCchHHHHHH
Q 025135 194 DGADLVAYGRLFISNPDLVLRFK 216 (257)
Q Consensus 194 g~~D~V~igR~~iadP~l~~k~~ 216 (257)
| +|.|.++-..+. +..+++.
T Consensus 128 G-AD~VlL~~~~l~--~~l~~l~ 147 (254)
T 1vc4_A 128 G-ASAALLIVALLG--ELTGAYL 147 (254)
T ss_dssp T-CSEEEEEHHHHG--GGHHHHH
T ss_pred C-CCEEEECccchH--HHHHHHH
Confidence 7 999999999887 4555443
No 357
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=94.55 E-value=0.53 Score=41.72 Aligned_cols=138 Identities=14% Similarity=0.077 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCc-hhhHhhHHHHHHHHHHHHh--CCCeEEEEEccCC
Q 025135 26 QYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGS-IENRCRFLMQLVREVIVAI--GADRVGVRMSPAI 102 (257)
Q Consensus 26 ~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs-~enR~r~~~eiv~aiR~~v--g~~~v~vrls~~~ 102 (257)
+..+.+++..++|..||.|-.+-+ .+|....||. +.. ..-..+-|++++++. ++..|.-|....
T Consensus 117 ~v~~tv~~l~~aGaagv~iED~~~-----------~k~cgH~~gk~L~p-~~e~~~rI~Aa~~A~~~~~~~I~ARtda~- 183 (318)
T 1zlp_A 117 NVQRFIRELISAGAKGVFLEDQVW-----------PKKCGHMRGKAVVP-AEEHALKIAAAREAIGDSDFFLVARTDAR- 183 (318)
T ss_dssp HHHHHHHHHHHTTCCEEEEECBCS-----------SCCCSSSSCCCBCC-HHHHHHHHHHHHHHHTTSCCEEEEEECTH-
T ss_pred HHHHHHHHHHHcCCcEEEECCCCC-----------CccccCCCCCccCC-HHHHHHHHHHHHHhcccCCcEEEEeeHHh-
Confidence 345666777789999999976641 2344444443 222 223445566667665 332466666421
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEe---
Q 025135 103 DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICS--- 179 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~--- 179 (257)
. ....+++++=++.++++| .|.|-+... + ..+.++.|.+.+++|+++|
T Consensus 184 --a----~~gl~~ai~Ra~Ay~eAG------Ad~i~~e~~---------------~--~~e~~~~i~~~l~~P~lan~~~ 234 (318)
T 1zlp_A 184 --A----PHGLEEGIRRANLYKEAG------ADATFVEAP---------------A--NVDELKEVSAKTKGLRIANMIE 234 (318)
T ss_dssp --H----HHHHHHHHHHHHHHHHTT------CSEEEECCC---------------C--SHHHHHHHHHHSCSEEEEEECT
T ss_pred --h----hcCHHHHHHHHHHHHHcC------CCEEEEcCC---------------C--CHHHHHHHHHhcCCCEEEEecc
Confidence 0 012467888899999999 676654321 1 1245677888999998543
Q ss_pred CCCCH-HHHHHHHHcCCCcEEEechHHh
Q 025135 180 GGFTR-ELGIQALAEDGADLVAYGRLFI 206 (257)
Q Consensus 180 G~it~-~~a~~~l~~g~~D~V~igR~~i 206 (257)
++-++ -..+++-+-| +.+|.++-.++
T Consensus 235 ~g~~~~~~~~eL~~lG-v~~v~~~~~~~ 261 (318)
T 1zlp_A 235 GGKTPLHTPEEFKEMG-FHLIAHSLTAV 261 (318)
T ss_dssp TSSSCCCCHHHHHHHT-CCEEEECSHHH
T ss_pred CCCCCCCCHHHHHHcC-CeEEEEchHHH
Confidence 32221 1233444445 99999987766
No 358
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=94.54 E-value=0.26 Score=43.50 Aligned_cols=138 Identities=9% Similarity=0.031 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCC-chhhHhhHHHHHHHHHHHHh---CCC-eEEEEEcc
Q 025135 26 QYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGG-SIENRCRFLMQLVREVIVAI---GAD-RVGVRMSP 100 (257)
Q Consensus 26 ~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGG-s~enR~r~~~eiv~aiR~~v---g~~-~v~vrls~ 100 (257)
+..+.+++..++|..||.|-...+ .+|....+| .+...- -..+-|++.|++. +++ .|..|.-.
T Consensus 104 ~v~~~v~~l~~aGaagv~iEDq~~-----------~k~cgh~~gk~l~~~~-e~~~rI~Aa~~A~~~~~~d~~I~ARTDa 171 (307)
T 3lye_A 104 MVARTVEHYIRSGVAGAHLEDQIL-----------TKRCGHLSGKKVVSRD-EYLVRIRAAVATKRRLRSDFVLIARTDA 171 (307)
T ss_dssp HHHHHHHHHHHTTCCEEEECCBCC-----------CC--------CBCCHH-HHHHHHHHHHHHHHHTTCCCEEEEEECC
T ss_pred HHHHHHHHHHHcCCeEEEEcCCCC-----------CcccCCCCCCeecCHH-HHHHHHHHHHHHHHhcCCCeEEEEechh
Confidence 345667778889999999976541 234433333 222222 2334455555543 655 57778754
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhC-CcEEEe
Q 025135 101 AIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQ-GTFICS 179 (257)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~ 179 (257)
.. ....+++++-++...++| .|.|-+... . ..+.++++.+.++ +||++|
T Consensus 172 ~~-------~~gldeAi~Ra~ay~eAG------AD~ifi~~~---------------~--~~~~~~~i~~~~~~~Pv~~n 221 (307)
T 3lye_A 172 LQ-------SLGYEECIERLRAARDEG------ADVGLLEGF---------------R--SKEQAAAAVAALAPWPLLLN 221 (307)
T ss_dssp HH-------HHCHHHHHHHHHHHHHTT------CSEEEECCC---------------S--CHHHHHHHHHHHTTSCBEEE
T ss_pred hh-------ccCHHHHHHHHHHHHHCC------CCEEEecCC---------------C--CHHHHHHHHHHccCCceeEE
Confidence 21 023778899999999999 676654321 0 1234566777775 787553
Q ss_pred ---CCCCHH-HHHHHHHcCCCcEEEechHHh
Q 025135 180 ---GGFTRE-LGIQALAEDGADLVAYGRLFI 206 (257)
Q Consensus 180 ---G~it~~-~a~~~l~~g~~D~V~igR~~i 206 (257)
++-+|. ..+++-+-| +..|..+-.++
T Consensus 222 ~~~~g~~p~~t~~eL~~lG-v~~v~~~~~~~ 251 (307)
T 3lye_A 222 SVENGHSPLITVEEAKAMG-FRIMIFSFATL 251 (307)
T ss_dssp EETTSSSCCCCHHHHHHHT-CSEEEEETTTH
T ss_pred eecCCCCCCCCHHHHHHcC-CeEEEEChHHH
Confidence 332221 233444446 89999987555
No 359
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=94.49 E-value=0.18 Score=45.49 Aligned_cols=70 Identities=13% Similarity=0.093 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh-CCcEEEeCCCCHHHHHHHHH
Q 025135 114 GLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY-QGTFICSGGFTRELGIQALA 192 (257)
Q Consensus 114 ~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~G~it~~~a~~~l~ 192 (257)
+...+.++.+.++| +++|++..+. + .....++.++.+|+.+ ++||++.+-.|+++|..+++
T Consensus 99 ~~~~e~~~~a~~aG------vdvI~id~a~----G--------~~~~~~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~a~~ 160 (361)
T 3r2g_A 99 ENELQRAEALRDAG------ADFFCVDVAH----A--------HAKYVGKTLKSLRQLLGSRCIMAGNVATYAGADYLAS 160 (361)
T ss_dssp HHHHHHHHHHHHTT------CCEEEEECSC----C--------SSHHHHHHHHHHHHHHTTCEEEEEEECSHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC------CCEEEEeCCC----C--------CcHhHHHHHHHHHHhcCCCeEEEcCcCCHHHHHHHHH
Confidence 34567889999999 8888775321 0 1123346778899987 57777733349999999999
Q ss_pred cCCCcEEEec
Q 025135 193 EDGADLVAYG 202 (257)
Q Consensus 193 ~g~~D~V~ig 202 (257)
.| +|+|.+|
T Consensus 161 aG-aD~I~Vg 169 (361)
T 3r2g_A 161 CG-ADIIKAG 169 (361)
T ss_dssp TT-CSEEEEC
T ss_pred cC-CCEEEEc
Confidence 87 9999874
No 360
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=94.45 E-value=0.81 Score=39.21 Aligned_cols=71 Identities=14% Similarity=0.077 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCC-cEEEeCCCCHH-------
Q 025135 114 GLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQG-TFICSGGFTRE------- 185 (257)
Q Consensus 114 ~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~-pvi~~G~it~~------- 185 (257)
+...++++...++| ++-+.++ + ..+..||+..+. .++++.||.++
T Consensus 162 ~~V~~~A~~a~~aG------~~GvV~s------------------a---~e~~~iR~~~g~~fl~VtPGIr~qg~~~~dQ 214 (255)
T 3ldv_A 162 DHVLRLATLTKNAG------LDGVVCS------------------A---QEASLLKQHLGREFKLVTPGIRPAGSEQGDQ 214 (255)
T ss_dssp HHHHHHHHHHHHTT------CSEEECC------------------H---HHHHHHHHHHCTTSEEEEECCCCTTSTTSSC
T ss_pred HHHHHHHHHHHHcC------CCEEEEC------------------H---HHHHHHHHhcCCCcEEEeCCcccCcCCccce
Confidence 44566777777778 5544322 1 134567887754 35566666432
Q ss_pred ----HHHHHHHcCCCcEEEechHHhhCchHH
Q 025135 186 ----LGIQALAEDGADLVAYGRLFISNPDLV 212 (257)
Q Consensus 186 ----~a~~~l~~g~~D~V~igR~~iadP~l~ 212 (257)
...++++.| +|++.+||+....+|-.
T Consensus 215 ~Rv~t~~~a~~aG-ad~iVvGr~I~~a~dp~ 244 (255)
T 3ldv_A 215 RRIMTPAQAIASG-SDYLVIGRPITQAAHPE 244 (255)
T ss_dssp SSSCCHHHHHHTT-CSEEEECHHHHTCSCHH
T ss_pred eccCCHHHHHHcC-CCEEEECHHHhCCCCHH
Confidence 156778887 99999999999765543
No 361
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=94.45 E-value=1.4 Score=36.95 Aligned_cols=51 Identities=14% Similarity=0.111 Sum_probs=35.3
Q ss_pred HHHHHHh-CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCchHHHHHH
Q 025135 166 RTWRRSY-QGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNPDLVLRFK 216 (257)
Q Consensus 166 ~~ir~~~-~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~ 216 (257)
+.+|+.. +++++..|++++.++.+.+.+-++|.+.+|.+++.-+++...++
T Consensus 165 ~~ir~~~~~~~ilyggsV~~~n~~~~~~~~giDG~LVG~a~l~a~~~~~~i~ 216 (226)
T 1w0m_A 165 GLVSRHFPEVSVITGAGIESGDDVAAALRLGTRGVLLASAAVKAKDPYAKIV 216 (226)
T ss_dssp HHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTCSSHHHHHH
T ss_pred HHHHhccCCCEEEEeCCCCcHHHHHHHHhCCCCEEEECHHHHCCcCHHHHHH
Confidence 3455543 35688888995444444444555999999999998888766553
No 362
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=94.33 E-value=0.4 Score=42.47 Aligned_cols=104 Identities=14% Similarity=0.064 Sum_probs=64.1
Q ss_pred cCCcCCCCCCc--hhhHhhHH---HHHHHHHHHHhCCCeEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCce
Q 025135 60 INDRTDEYGGS--IENRCRFL---MQLVREVIVAIGADRVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKL 134 (257)
Q Consensus 60 ~N~R~D~yGGs--~enR~r~~---~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~v 134 (257)
.|+|..-+-+- .+|-..+. .+.+++.|+..+..+|.|-+. +.+++.+ ..++| +
T Consensus 195 ~nHR~gL~d~vlikdnHi~~~G~i~~Av~~ar~~~p~~kIeVEVd------------tldea~e----Al~aG------a 252 (320)
T 3paj_A 195 YNHRIGVFDAYLIKENHIIACGGIRQAISTAKQLNPGKPVEVETE------------TLAELEE----AISAG------A 252 (320)
T ss_dssp BCCCSSSSSCEEECHHHHHHHTSHHHHHHHHHHHSTTSCEEEEES------------SHHHHHH----HHHTT------C
T ss_pred cceecccchhhccHHHHHHHhCCHHHHHHHHHHhCCCCeEEEEEC------------CHHHHHH----HHHcC------C
Confidence 36666655443 23444443 456677777766445555442 3444332 33468 7
Q ss_pred eEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh--CCcEEEeCCCCHHHHHHHHHcCCCcEEEechH
Q 025135 135 TYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY--QGTFICSGGFTRELGIQALAEDGADLVAYGRL 204 (257)
Q Consensus 135 d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~ 204 (257)
|+|-+... .+ ..++++.+.+ .+++.++||+|++.+.++.+.| +|++++|.-
T Consensus 253 D~I~LDn~---------------~~---~~l~~av~~l~~~v~ieaSGGIt~~~I~~~a~tG-VD~isvGal 305 (320)
T 3paj_A 253 DIIMLDNF---------------SL---EMMREAVKINAGRAALENSGNITLDNLKECAETG-VDYISVGAL 305 (320)
T ss_dssp SEEEEESC---------------CH---HHHHHHHHHHTTSSEEEEESSCCHHHHHHHHTTT-CSEEECTHH
T ss_pred CEEEECCC---------------CH---HHHHHHHHHhCCCCeEEEECCCCHHHHHHHHHcC-CCEEEECce
Confidence 87766441 11 2233334444 4679999999999999998877 999999974
No 363
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=94.31 E-value=0.12 Score=44.86 Aligned_cols=120 Identities=12% Similarity=0.163 Sum_probs=77.0
Q ss_pred HHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCC
Q 025135 28 RQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDA 107 (257)
Q Consensus 28 ~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~ 107 (257)
.+.|+.|.+||+.+|-..-+| |.- .| ..||. -|+ --.+.|++||++|.- ||.-|....
T Consensus 21 ~eqa~iae~aGa~av~~l~~~---------p~d-~r--~~gGv--~Rm-~dp~~I~~I~~aVsI-PVm~k~rig------ 78 (291)
T 3o07_A 21 PEQAKIAEKSGACAVMALESI---------PAD-MR--KSGKV--CRM-SDPKMIKDIMNSVSI-PVMAKVRIG------ 78 (291)
T ss_dssp HHHHHHHHHHTCSEEEECSSC---------HHH-HH--TTTCC--CCC-CCHHHHHHHHTTCSS-CEEEEEETT------
T ss_pred HHHHHHHHHhCchhhhhccCC---------Cch-hh--hcCCc--ccc-CCHHHHHHHHHhCCC-CeEEEEecC------
Confidence 467889999999999988888 432 33 33553 111 124568888999843 777666632
Q ss_pred CCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHH-HHhCCcEEEeCCCCHHH
Q 025135 108 TDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWR-RSYQGTFICSGGFTREL 186 (257)
Q Consensus 108 ~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir-~~~~~pvi~~G~it~~~ 186 (257)
.. .=++.|+++| +|||+-++.. .+. ... ..|. ..+++|+++. --|.++
T Consensus 79 ----h~----~EAqilea~G------aD~IDesevl--tpa-----------d~~---~~I~k~~f~vpfv~~-~~~l~E 127 (291)
T 3o07_A 79 ----HF----VEAQIIEALE------VDYIDESEVL--TPA-----------DWT---HHIEKDKFKVPFVCG-AKDLGE 127 (291)
T ss_dssp ----CH----HHHHHHHHTT------CSEEEEETTS--CCS-----------CSS---CCCCGGGCSSCEEEE-ESSHHH
T ss_pred ----cH----HHHHHHHHcC------CCEEecccCC--CHH-----------HHH---HHhhhhcCCCcEEee-CCCHHH
Confidence 12 2367788999 9999866421 110 000 1122 3467887752 227999
Q ss_pred HHHHHHcCCCcEEEe
Q 025135 187 GIQALAEDGADLVAY 201 (257)
Q Consensus 187 a~~~l~~g~~D~V~i 201 (257)
|...+.+| +|+|.-
T Consensus 128 Alrri~eG-A~mIrT 141 (291)
T 3o07_A 128 ALRRINEG-AAMIRT 141 (291)
T ss_dssp HHHHHHHT-CSEEEE
T ss_pred HHHHHHCC-CCEEEe
Confidence 99999998 999984
No 364
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=94.25 E-value=1.6 Score=39.10 Aligned_cols=149 Identities=12% Similarity=0.030 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEc
Q 025135 20 IPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMS 99 (257)
Q Consensus 20 I~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls 99 (257)
|+.+++.-.++.+.+.++||+-|-|-+++- ++|...+...++++..++. |- .|-.-|.
T Consensus 106 ~~~~l~~~~~~i~~~i~~GFtSVMiDgS~l--------------------p~eENi~~Tk~vv~~ah~~-gv-sVEaElG 163 (349)
T 3elf_A 106 VRPLLAISAQRVSKGGNPLFQSHMWDGSAV--------------------PIDENLAIAQELLKAAAAA-KI-ILEIEIG 163 (349)
T ss_dssp HHHHHHHHHHHHHTTCCCSCSEEEECCTTS--------------------CHHHHHHHHHHHHHHHHHT-TC-EEEEEES
T ss_pred hhhhHHHHHHHHHHHhhcCCCEEEecCCCC--------------------CHHHHHHHHHHHHHHHHHc-CC-eEEEEee
Confidence 445555555555666667888888877761 4677899999999998863 21 3333333
Q ss_pred cCCCCCCC-------CCCCcHHHHHHHHHHHH--hcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHH
Q 025135 100 PAIDHLDA-------TDSDPLGLGLAVIQGLN--KLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRR 170 (257)
Q Consensus 100 ~~~~~~~~-------~~~~~~~~~~~l~~~L~--~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~ 170 (257)
.-.+-.+. ....+.+++.++++.+. ..| +|.|.+.-++..+.+. ++.... ..+.+++|++
T Consensus 164 ~iGG~Edgv~~~~~~~~yT~Peea~~Fv~~tg~~~~g------vD~LAvaiGt~HG~Yk--~g~p~L---~~~~L~~I~~ 232 (349)
T 3elf_A 164 VVGGEEDGVANEINEKLYTSPEDFEKTIEALGAGEHG------KYLLAATFGNVHGVYK--PGNVKL---RPDILAQGQQ 232 (349)
T ss_dssp CCBC-------------CCCHHHHHHHHHHHTTSTTS------CEEEEECSSCBSSCCC--TTSSCC---CTHHHHHHHH
T ss_pred ccccccCCcccccccccCCCHHHHHHHHHHhCCCCCC------ceEEEEecCCcccCCC--CCCCcc---CHHHHHHHHH
Confidence 21111110 11245778888887764 345 7888876555443321 111111 1244555665
Q ss_pred Hh-----------CCcEEEeCC--CCHHHHHHHHHcCCCcEEEec
Q 025135 171 SY-----------QGTFICSGG--FTRELGIQALAEDGADLVAYG 202 (257)
Q Consensus 171 ~~-----------~~pvi~~G~--it~~~a~~~l~~g~~D~V~ig 202 (257)
.+ ++|++.=|+ +..++..++++.| +-=|=++
T Consensus 233 ~v~~~~~~~~~~~~vpLVlHGgSG~p~e~i~~ai~~G-V~KiNi~ 276 (349)
T 3elf_A 233 VAAAKLGLPADAKPFDFVFHGGSGSLKSEIEEALRYG-VVKMNVD 276 (349)
T ss_dssp HHHHHHTCCTTCCCCCEEECCCTTCCHHHHHHHHHTT-EEEEEEC
T ss_pred HHHhhcCCccccCCCcEEEeCCCCCCHHHHHHHHHcC-CEEEEcc
Confidence 54 578776655 4788899999988 3333333
No 365
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=94.17 E-value=0.28 Score=42.76 Aligned_cols=81 Identities=22% Similarity=0.164 Sum_probs=45.1
Q ss_pred HHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCCCCC
Q 025135 28 RQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAIDHLD 106 (257)
Q Consensus 28 ~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~~~~ 106 (257)
.+.|..|+++|+|-|||..++ .-||.. .-..+++.+|+.+.-. .+.||=+.. +|--
T Consensus 49 ~~~a~~A~~gGAdRIELc~~l-----------------~~GGlT-----PS~g~i~~a~~~~~ipV~vMIRPRgG-dF~Y 105 (287)
T 3iwp_A 49 VESAVNAERGGADRIELCSGL-----------------SEGGTT-----PSMGVLQVVKQSVQIPVFVMIRPRGG-DFLY 105 (287)
T ss_dssp HHHHHHHHHHTCSEEEECBCG-----------------GGTCBC-----CCHHHHHHHHTTCCSCEEEECCSSSS-CSCC
T ss_pred HHHHHHHHHhCCCEEEECCCC-----------------CCCCCC-----CCHHHHHHHHHhcCCCeEEEEecCCC-Cccc
Confidence 467778899999999997554 113311 1234566777766432 244554321 2321
Q ss_pred CCCCCcHHHHHHHHHHHHhcCCccCCceeEEEe
Q 025135 107 ATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHV 139 (257)
Q Consensus 107 ~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v 139 (257)
.....+.+.+-++.+.++| ++.|++
T Consensus 106 --s~~E~~~M~~dI~~~~~~G------AdGvVf 130 (287)
T 3iwp_A 106 --SDREIEVMKADIRLAKLYG------ADGLVF 130 (287)
T ss_dssp --CHHHHHHHHHHHHHHHHTT------CSEEEE
T ss_pred --CHHHHHHHHHHHHHHHHcC------CCEEEE
Confidence 1122444555667777788 565554
No 366
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=94.13 E-value=2.3 Score=37.66 Aligned_cols=130 Identities=13% Similarity=0.111 Sum_probs=79.3
Q ss_pred HHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCC----C
Q 025135 31 ALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHL----D 106 (257)
Q Consensus 31 A~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~----~ 106 (257)
+++|.++||+-|-|-++| =++|...+...++++..++. |- .|-.-|..-.+-. .
T Consensus 91 i~~ai~~GFtSVMiDgS~--------------------~p~eENi~~Tk~vv~~ah~~-gv-sVEaELG~vgg~Ed~v~~ 148 (323)
T 2isw_A 91 VKMAIDLGFSSVMIDASH--------------------HPFDENVRITKEVVAYAHAR-SV-SVEAELGTLGGIEEDVQN 148 (323)
T ss_dssp HHHHHHTTCSEEEECCTT--------------------SCHHHHHHHHHHHHHHHHTT-TC-EEEEEESCC---------
T ss_pred HHHHHHcCCCeEEecCCC--------------------CCHHHHHHHHHHHHHHHHHc-CC-eEEEEeCCccCCccCccc
Confidence 556778888888888776 14577789999999988753 21 3333333211101 0
Q ss_pred CCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCc-hhHHHHHHHHHHHhCCcEEEeC-----
Q 025135 107 ATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTE-DEEAQLLRTWRRSYQGTFICSG----- 180 (257)
Q Consensus 107 ~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ir~~~~~pvi~~G----- 180 (257)
.....+.+++.++++ +.| +|.|-+.-++.++.+.+. +. ++ ....+.+++|++.+++|++.=|
T Consensus 149 ~~~yTdPeea~~Fv~---~Tg------vD~LAvaiGt~HG~Yk~~-~~--p~~~L~~~~L~~I~~~~~vpLVlHGgSsvp 216 (323)
T 2isw_A 149 TVQLTEPQDAKKFVE---LTG------VDALAVAIGTSHGAYKFK-SE--SDIRLAIDRVKTISDLTGIPLVMHGSSSVP 216 (323)
T ss_dssp -CCCCCHHHHHHHHH---HHC------CSEEEECSSCCSSSBCCC-C------CCCCHHHHHHHHHHCSCEEECSCCCCC
T ss_pred ccccCCHHHHHHHHH---HHC------CCEEEEecCccccccCCC-CC--cccccCHHHHHHHHHHhCCCeEEECCCCCC
Confidence 111245677776665 468 888887766554433210 10 11 0123567889999999987766
Q ss_pred ------------------CCCHHHHHHHHHcC
Q 025135 181 ------------------GFTRELGIQALAED 194 (257)
Q Consensus 181 ------------------~it~~~a~~~l~~g 194 (257)
|+..++..++++.|
T Consensus 217 ~~~~~~~~~~gg~~~~~~Gvp~e~i~~ai~~G 248 (323)
T 2isw_A 217 KDVKDMINKYGGKMPDAVGVPIESIVHAIGEG 248 (323)
T ss_dssp HHHHHHHHHTTCCCTTCBCCCHHHHHHHHHTT
T ss_pred HHHHHHHHHhccccccCCCCCHHHHHHHHHCC
Confidence 56678888888888
No 367
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=94.06 E-value=2.9 Score=36.73 Aligned_cols=118 Identities=16% Similarity=0.177 Sum_probs=70.8
Q ss_pred HHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCC-
Q 025135 29 QAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDA- 107 (257)
Q Consensus 29 ~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~- 107 (257)
+..++|.++||+-|-|-++| =++|...+...++++..++. |- .|-.-|..-.+-.+.
T Consensus 86 e~~~~ai~~GFtSVMiDgS~--------------------~p~eENi~~Tk~vv~~ah~~-gv-sVEaELG~vgg~Ed~~ 143 (305)
T 1rvg_A 86 ESVLRALRAGFTSVMIDKSH--------------------EDFETNVRETRRVVEAAHAV-GV-TVEAELGRLAGIEEHV 143 (305)
T ss_dssp HHHHHHHHTTCSEEEECCTT--------------------SCHHHHHHHHHHHHHHHHHT-TC-EEEEEESCCCCSCC--
T ss_pred HHHHHHHHcCCCeeeeCCCC--------------------CCHHHHHHHHHHHHHHHHHc-CC-EEEEEEeeccCccCCc
Confidence 34456678888888888776 13677899999999998853 32 343334321111110
Q ss_pred ------CCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCC
Q 025135 108 ------TDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGG 181 (257)
Q Consensus 108 ------~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~ 181 (257)
....+.+++.++++ +.| +|.+-+.-++.++.+.+ ++ ......+.+++|++.+++|++.=|+
T Consensus 144 ~~~~~~~~yT~Peea~~Fv~---~Tg------vD~LAvaiGt~HG~Yk~-~g---~p~L~~~~L~~I~~~~~vpLVlHGg 210 (305)
T 1rvg_A 144 AVDEKDALLTNPEEARIFME---RTG------ADYLAVAIGTSHGAYKG-KG---RPFIDHARLERIARLVPAPLVLHGA 210 (305)
T ss_dssp ----CCTTCCCHHHHHHHHH---HHC------CSEEEECSSCCSSSBCS-SS---SCCCCHHHHHHHHHHCCSCEEECSC
T ss_pred cccccccccCCHHHHHHHHH---HHC------CCEEEEecCccccccCC-CC---CCccCHHHHHHHHHhcCCCEEEeCC
Confidence 11245677777665 458 88888776555443311 01 1112346788899999999776553
No 368
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=93.91 E-value=3.1 Score=36.55 Aligned_cols=130 Identities=16% Similarity=0.178 Sum_probs=77.8
Q ss_pred HHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCC--
Q 025135 30 AALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDA-- 107 (257)
Q Consensus 30 AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~-- 107 (257)
..++|.++||+-|-|-++|- ++|...+...++++..++. |- .|-.-|..-.+..+.
T Consensus 89 ~~~~ai~~GFtSVMiDgS~~--------------------p~eeNi~~Tk~vv~~ah~~-gv-sVEaELG~igG~Ed~~~ 146 (307)
T 3n9r_A 89 SCEKAVKAGFTSVMIDASHH--------------------AFEENLELTSKVVKMAHNA-GV-SVEAELGRLMGIEDNIS 146 (307)
T ss_dssp HHHHHHHHTCSEEEECCTTS--------------------CHHHHHHHHHHHHHHHHHT-TC-EEEEEESCCCCC-----
T ss_pred HHHHHHHhCCCcEEEECCCC--------------------CHHHHHHHHHHHHHHHHHc-CC-eEEEEeeeeccccCCcc
Confidence 34566788999998888771 4677799999999998863 21 333333321111110
Q ss_pred -----CCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeC--
Q 025135 108 -----TDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSG-- 180 (257)
Q Consensus 108 -----~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G-- 180 (257)
....+.+++.++++ +.| +|+|.+.-++.++.+.. ++. +....+.+++|++..++|++.=|
T Consensus 147 ~~~~~~~yT~Peea~~Fv~---~Tg------vD~LAvaiGt~HG~Yk~-~~~---p~Ld~~~L~~I~~~~~~PLVlHGgS 213 (307)
T 3n9r_A 147 VDEKDAVLVNPKEAEQFVK---ESQ------VDYLAPAIGTSHGAFKF-KGE---PKLDFERLQEVKRLTNIPLVLHGAS 213 (307)
T ss_dssp -----CCSCCHHHHHHHHH---HHC------CSEEEECSSCCSSSBCC-SSS---CCCCHHHHHHHHHHHCSCEEESSCC
T ss_pred cccccccCCCHHHHHHHHH---HHC------CCEEEEecCCcccccCC-CCC---CccCHHHHHHHHhcCCCCeEEeCCC
Confidence 11234677777654 468 88888765554433210 000 11223567778877889977655
Q ss_pred ---------------------CCCHHHHHHHHHcC
Q 025135 181 ---------------------GFTRELGIQALAED 194 (257)
Q Consensus 181 ---------------------~it~~~a~~~l~~g 194 (257)
|+..++..++++.|
T Consensus 214 ~vp~~~~~~~~~~gg~~~~~~G~p~e~i~~ai~~G 248 (307)
T 3n9r_A 214 AIPDNVRKSYLDAGGDLKGSKGVPFEFLQESVKGG 248 (307)
T ss_dssp CCCHHHHHHHHHTTCCCTTCBCCCHHHHHHHHHTT
T ss_pred CcchHHHHHHHHhcCccCCCCCCCHHHHHHHHHcC
Confidence 44567777888777
No 369
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=93.90 E-value=0.72 Score=40.53 Aligned_cols=138 Identities=12% Similarity=0.122 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCC-chhhHhhHHHHHHHHHHHH---hCCC-eEEEEEcc
Q 025135 26 QYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGG-SIENRCRFLMQLVREVIVA---IGAD-RVGVRMSP 100 (257)
Q Consensus 26 ~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGG-s~enR~r~~~eiv~aiR~~---vg~~-~v~vrls~ 100 (257)
+..+.+++..++|..||.|-...+ | +|....+| .+...-.+ .+-|++.|++ .+++ .|..|.-.
T Consensus 96 ~v~~tv~~l~~aGaagv~iEDq~~--------~---Krcgh~~gk~l~~~~e~-~~rI~Aa~~A~~~~~~d~~I~ARTDa 163 (302)
T 3fa4_A 96 MVARTTEQYSRSGVAAFHIEDQVQ--------T---KRCGHLAGKILVDTDTY-VTRIRAAVQARQRIGSDIVVIARTDS 163 (302)
T ss_dssp HHHHHHHHHHHTTCCEEEECSBCC--------C----------CCCBCCHHHH-HHHHHHHHHHHHHHTCCCEEEEEECC
T ss_pred HHHHHHHHHHHcCCcEEEECCCCC--------C---cccCCCCCCeecCHHHH-HHHHHHHHHHHHhcCCCEEEEEEecc
Confidence 345677788899999999976431 2 34333333 22222223 3334444444 3555 57778864
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhC-CcEEEe
Q 025135 101 AIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQ-GTFICS 179 (257)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~ 179 (257)
.. ....+++++-++...++| .|.|-+... . ..+.++.+.+.++ .|+.+|
T Consensus 164 ~~-------~~gldeAi~Ra~ay~eAG------AD~ifi~g~---------------~--~~~ei~~~~~~~~~~Pl~~n 213 (302)
T 3fa4_A 164 LQ-------THGYEESVARLRAARDAG------ADVGFLEGI---------------T--SREMARQVIQDLAGWPLLLN 213 (302)
T ss_dssp HH-------HHCHHHHHHHHHHHHTTT------CSEEEETTC---------------C--CHHHHHHHHHHTTTSCEEEE
T ss_pred cc-------cCCHHHHHHHHHHHHHcC------CCEEeecCC---------------C--CHHHHHHHHHHhcCCceeEE
Confidence 21 024788999999999999 776654331 0 1234566777774 787664
Q ss_pred ---CCCCHH-HHHHHHHcCCCcEEEechHHh
Q 025135 180 ---GGFTRE-LGIQALAEDGADLVAYGRLFI 206 (257)
Q Consensus 180 ---G~it~~-~a~~~l~~g~~D~V~igR~~i 206 (257)
++-++. ..+++-+-| +..|.++-.++
T Consensus 214 ~~~~g~~p~~~~~eL~~lG-v~~v~~~~~~~ 243 (302)
T 3fa4_A 214 MVEHGATPSISAAEAKEMG-FRIIIFPFAAL 243 (302)
T ss_dssp CCTTSSSCCCCHHHHHHHT-CSEEEETTTTH
T ss_pred EecCCCCCCCCHHHHHHcC-CCEEEEchHHH
Confidence 222221 233333445 89999986665
No 370
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=93.89 E-value=2.8 Score=36.44 Aligned_cols=138 Identities=11% Similarity=-0.008 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCC--C-chhhHhhHHHHHHHHHHHHh--CCCeEEEEEc
Q 025135 25 DQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYG--G-SIENRCRFLMQLVREVIVAI--GADRVGVRMS 99 (257)
Q Consensus 25 ~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yG--G-s~enR~r~~~eiv~aiR~~v--g~~~v~vrls 99 (257)
++..+.+++..++|..||.|-.+.+ .+|....| | .+.... -..+-|++++++. ++..|.-|..
T Consensus 90 ~~~~~~v~~l~~aGa~gv~iED~~~-----------~k~cgH~~~~~k~l~p~~-e~~~kI~Aa~~a~~~~~~~i~aRtd 157 (290)
T 2hjp_A 90 VNVHYVVPQYEAAGASAIVMEDKTF-----------PKDTSLRTDGRQELVRIE-EFQGKIAAATAARADRDFVVIARVE 157 (290)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECBCS-----------SCCC-------CCBCCHH-HHHHHHHHHHHHCSSTTSEEEEEEC
T ss_pred HHHHHHHHHHHHhCCeEEEEcCCCC-----------CccccccccCCCcccCHH-HHHHHHHHHHHhcccCCcEEEEeeh
Confidence 4456677777889999999977642 23444444 2 222222 2345566666663 3334666764
Q ss_pred cCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhC--CcEE
Q 025135 100 PAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQ--GTFI 177 (257)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~--~pvi 177 (257)
.. .. ....+++++=++.++++| .|.|-+... . .. .+.++.|.+.++ +|++
T Consensus 158 a~--~a----~~g~~~ai~Ra~ay~eAG------Ad~i~~e~~-~------------~~---~~~~~~i~~~~~~~vP~i 209 (290)
T 2hjp_A 158 AL--IA----GLGQQEAVRRGQAYEEAG------ADAILIHSR-Q------------KT---PDEILAFVKSWPGKVPLV 209 (290)
T ss_dssp TT--TT----TCCHHHHHHHHHHHHHTT------CSEEEECCC-C------------SS---SHHHHHHHHHCCCSSCEE
T ss_pred Hh--hc----cccHHHHHHHHHHHHHcC------CcEEEeCCC-C------------CC---HHHHHHHHHHcCCCCCEE
Confidence 31 01 124788899999999999 676654331 0 00 134567888888 8988
Q ss_pred EeC---C-CCHHHHHHHHHcCC-CcEEEechHHh
Q 025135 178 CSG---G-FTRELGIQALAEDG-ADLVAYGRLFI 206 (257)
Q Consensus 178 ~~G---~-it~~~a~~~l~~g~-~D~V~igR~~i 206 (257)
++- . ++. ++ |.+=+ +..|.++-.++
T Consensus 210 ~n~~~~~~~~~---~e-L~~lG~v~~v~~~~~~~ 239 (290)
T 2hjp_A 210 LVPTAYPQLTE---AD-IAALSKVGIVIYGNHAI 239 (290)
T ss_dssp ECGGGCTTSCH---HH-HHTCTTEEEEEECSHHH
T ss_pred EeccCCCCCCH---HH-HHhcCCeeEEEechHHH
Confidence 762 1 243 33 44445 99999987766
No 371
>3qw3_A Orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative (OMPDCASE-OPRTASE,...; orotidine monophosphate decarboxylase; 1.70A {Leishmania infantum}
Probab=93.87 E-value=0.47 Score=40.66 Aligned_cols=138 Identities=16% Similarity=0.043 Sum_probs=70.9
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEE
Q 025135 18 SEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGV 96 (257)
Q Consensus 18 ~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~v 96 (257)
-||-.++..|++++. .+.|+|.|-+|+.. |. +.+++..+..+.. .|.+
T Consensus 86 ~DI~nTv~~~a~~~~--~~lg~d~vTvh~~~--------------------G~---------~~l~~~~~~~~~gv~vL~ 134 (255)
T 3qw3_A 86 GDIADTADAYATSAF--KHLNAHAITASPYM--------------------GS---------DSLQPFMRYPDKAVFVLC 134 (255)
T ss_dssp CCCHHHHHHHHHHHH--TTSCCSEEEECCTT--------------------CH---------HHHHHHHTCTTSEEEEEE
T ss_pred CCcHHHHHHHHHHHH--HHcCCCEEEEcccC--------------------CH---------HHHHHHHHhhCCceEEEE
Confidence 366677776666552 25899999998543 31 2233333333333 4677
Q ss_pred EEccCC--CCCCCCC-CCc-HHHHHHHHHH-HHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHH
Q 025135 97 RMSPAI--DHLDATD-SDP-LGLGLAVIQG-LNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRS 171 (257)
Q Consensus 97 rls~~~--~~~~~~~-~~~-~~~~~~l~~~-L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~ 171 (257)
++|..+ ++++.+. ..+ .+...++++. ..+.| ++-+.++. ..+ +.+..||+.
T Consensus 135 ~tS~~~~~~~q~~~~~~~~~~~~V~~~a~~~~~~~g------~~GvV~~a---------------t~~---~e~~~ir~~ 190 (255)
T 3qw3_A 135 KTSNKGSNDLQCLRVGDRYLYEAVAERAEGPWNVNG------NVGLVVGA---------------TDP---VALARVRAR 190 (255)
T ss_dssp ECCSGGGGTTTTSEETTEEHHHHHHHHHHTGGGGGS------CEEEEECS---------------SCH---HHHHHHHHH
T ss_pred eCCCccHHHHHhcccCCCCHHHHHHHHHHHHhhhhC------CeEEEECC---------------CCH---HHHHHHHHH
Confidence 777431 2332210 112 2333444444 44466 55554432 112 234567887
Q ss_pred hCCcEEEeCCCCH--HHHHHHHHcCCCc------EEEechHHhhCchH
Q 025135 172 YQGTFICSGGFTR--ELGIQALAEDGAD------LVAYGRLFISNPDL 211 (257)
Q Consensus 172 ~~~pvi~~G~it~--~~a~~~l~~g~~D------~V~igR~~iadP~l 211 (257)
++...+++=||.+ .+.+++++.| +| ++.+||+.+.-+|-
T Consensus 191 ~~~~~~l~PGIg~qg~tp~~a~~~G-~d~~~~~~livvGR~I~~A~dp 237 (255)
T 3qw3_A 191 APTLWFLVPGIGAQGGSLKASLDAG-LRADGSGMLINVSRGLARAADP 237 (255)
T ss_dssp CSSCCEEECCC-----CHHHHHHHH-CCTTSCCEEEEESHHHHTSSCH
T ss_pred CCCCeEEECCcCCCCCCHHHHHHcC-CCcccCeeEEEeChhhcCCCCH
Confidence 6533233433321 2334455555 55 59999999976554
No 372
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=93.85 E-value=0.29 Score=42.05 Aligned_cols=54 Identities=9% Similarity=0.017 Sum_probs=42.4
Q ss_pred HHHHHHHhC--CcEEEeCCC-CHHHHHHHHHcCCCcEEEechHHhhCchHHHHHHcCC
Q 025135 165 LRTWRRSYQ--GTFICSGGF-TRELGIQALAEDGADLVAYGRLFISNPDLVLRFKLNA 219 (257)
Q Consensus 165 ~~~ir~~~~--~pvi~~G~i-t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~g~ 219 (257)
...+.+.++ +.+|+-+|| |++++..+.+.| +|.|.+|..|+.+||-.+++.+|.
T Consensus 194 t~~L~~~ip~~~~~VsESGI~t~~dv~~l~~~G-~~a~LVGealmr~~d~~~~Li~G~ 250 (258)
T 4a29_A 194 QRKLISMIPSNVVKVAKLGISERNEIEELRKLG-VNAFLISSSLMRNPEKIKELIEGS 250 (258)
T ss_dssp HHHHHTTSCTTSEEEEEESSCCHHHHHHHHHTT-CCEEEECHHHHHCTTHHHHHHC--
T ss_pred HHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHCC-CCEEEECHHHhCCCcHHHHHHcCc
Confidence 344555553 446666888 999999998887 999999999999999889998875
No 373
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=93.83 E-value=0.66 Score=40.68 Aligned_cols=107 Identities=7% Similarity=0.027 Sum_probs=64.6
Q ss_pred cCCcCCCCCCc--hhhHhhHH---HHHHHHHHHHhCCCeEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCce
Q 025135 60 INDRTDEYGGS--IENRCRFL---MQLVREVIVAIGADRVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKL 134 (257)
Q Consensus 60 ~N~R~D~yGGs--~enR~r~~---~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~v 134 (257)
.|+|-+-|-+- .+|-..+. .+.|+++|+..+..+|.|-.. +.+++.+ ..++| +
T Consensus 171 ~nHR~gL~D~vLIKdNHi~~~G~i~~Av~~ar~~~p~~kIeVEv~------------tl~e~~e----Al~aG------a 228 (300)
T 3l0g_A 171 ESYRDNLCDGVLIKDNHIASCGSITLAIQRLRKNLKNEYIAIECD------------NISQVEE----SLSNN------V 228 (300)
T ss_dssp BCSCSSTTSCEEECHHHHHHHSCHHHHHHHHHHHSSSCCEEEEES------------SHHHHHH----HHHTT------C
T ss_pred cccccCCcceEEEcHhHHHHhCCHHHHHHHHHHhCCCCCEEEEEC------------CHHHHHH----HHHcC------C
Confidence 47888777654 34554453 466777787765435655443 3444433 33468 7
Q ss_pred eEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCCCHHHHHHHHHcCCCcEEEechHH
Q 025135 135 TYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGFTRELGIQALAEDGADLVAYGRLF 205 (257)
Q Consensus 135 d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~ 205 (257)
|.|-+... ........++.++. .+.+.++||+|++.+.++.+.| +|+|++|...
T Consensus 229 DiImLDn~--------------s~~~l~~av~~~~~--~v~leaSGGIt~~~i~~~A~tG-VD~IsvGalt 282 (300)
T 3l0g_A 229 DMILLDNM--------------SISEIKKAVDIVNG--KSVLEVSGCVNIRNVRNIALTG-VDYISIGCIT 282 (300)
T ss_dssp SEEEEESC--------------CHHHHHHHHHHHTT--SSEEEEESSCCTTTHHHHHTTT-CSEEECGGGT
T ss_pred CEEEECCC--------------CHHHHHHHHHhhcC--ceEEEEECCCCHHHHHHHHHcC-CCEEEeCccc
Confidence 77765431 11111122222221 4568899999999999988776 9999999543
No 374
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=93.82 E-value=0.85 Score=40.72 Aligned_cols=127 Identities=11% Similarity=-0.006 Sum_probs=78.9
Q ss_pred CChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeE
Q 025135 15 LQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRV 94 (257)
Q Consensus 15 lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v 94 (257)
+..+.++++++ ...++|.|||-+.+..|- |. -=|.+.|.+++.. .+-|.-+|
T Consensus 44 ID~~~l~~lv~-------~li~~Gv~Gl~v~GtTGE----~~-----------~Ls~eEr~~vi~~------~~~grvpV 95 (344)
T 2hmc_A 44 PDFDALVRKGK-------ELIADGMSAVVYCGSMGD----WP-----------LLTDEQRMEGVER------LVKAGIPV 95 (344)
T ss_dssp BCHHHHHHHHH-------HHHHTTCCCEEESSGGGT----GG-----------GSCHHHHHHHHHH------HHHTTCCE
T ss_pred cCHHHHHHHHH-------HHHHcCCCEEEeCccCcC----hh-----------hCCHHHHHHHHHH------HhCCCCcE
Confidence 44444445444 456799999998876642 11 0123556555443 22243366
Q ss_pred EEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCccc-CCCcCCCCCCCchhHHHHHHHHHH-Hh
Q 025135 95 GVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTA-YGQTESGRPGTEDEEAQLLRTWRR-SY 172 (257)
Q Consensus 95 ~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ir~-~~ 172 (257)
.+=++. .+.++++++++..++.| +|.+-+..|.|.. + .........+.|.+ +.
T Consensus 96 iaGvg~----------~st~eai~la~~A~~~G------adavlv~~P~y~~~~---------s~~~l~~~f~~IA~aa~ 150 (344)
T 2hmc_A 96 IVGTGA----------VNTASAVAHAVHAQKVG------AKGLMVIPRVLSRGS---------VIAAQKAHFKAILSAAP 150 (344)
T ss_dssp EEECCC----------SSHHHHHHHHHHHHHHT------CSEEEECCCCSSSTT---------CHHHHHHHHHHHHHHST
T ss_pred EEecCC----------CCHHHHHHHHHHHHhcC------CCEEEECCCccCCCC---------CHHHHHHHHHHHHhhCC
Confidence 654442 35688999999999999 8888887776543 2 12333445567888 78
Q ss_pred CCcEEE-e----C-CCCHHHHHHH-HHcC
Q 025135 173 QGTFIC-S----G-GFTRELGIQA-LAED 194 (257)
Q Consensus 173 ~~pvi~-~----G-~it~~~a~~~-l~~g 194 (257)
++||+. + | .++++...++ .+..
T Consensus 151 ~lPiilYn~P~tg~~l~~e~~~~L~a~~p 179 (344)
T 2hmc_A 151 EIPAVIYNSPYYGFATRADLFFALRAEHK 179 (344)
T ss_dssp TSCEEEEEBGGGTBCCCHHHHHHHHHHCT
T ss_pred CCcEEEEecCccCCCcCHHHHHHHHhcCC
Confidence 889765 2 4 2589988887 5443
No 375
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=93.80 E-value=0.49 Score=41.01 Aligned_cols=103 Identities=14% Similarity=0.103 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEE--EEEccCC
Q 025135 25 DQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVG--VRMSPAI 102 (257)
Q Consensus 25 ~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~--vrls~~~ 102 (257)
++-++.|.+..++|.++|.|-.+. -..+.|+++.++ |. ||. +.|.+..
T Consensus 95 ~~a~~na~rl~kaGa~aVklEdg~----------------------------e~~~~I~al~~a-gI-pV~gHiGLtPQs 144 (275)
T 1o66_A 95 EQAFAAAAELMAAGAHMVKLEGGV----------------------------WMAETTEFLQMR-GI-PVCAHIGLTPQS 144 (275)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECSG----------------------------GGHHHHHHHHHT-TC-CEEEEEESCGGG
T ss_pred HHHHHHHHHHHHcCCcEEEECCcH----------------------------HHHHHHHHHHHc-CC-CeEeeeccCcee
Confidence 344566667777999999987651 134445555543 32 443 2233321
Q ss_pred -----CCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEE
Q 025135 103 -----DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFI 177 (257)
Q Consensus 103 -----~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi 177 (257)
+|.-.+.....+.+++=++.++++| ++.|-+... + ...++.|.+.+++|+|
T Consensus 145 ~~~~ggf~v~grt~~a~~~i~rA~a~~eAG------A~~ivlE~v---------------p---~~~a~~it~~l~iP~i 200 (275)
T 1o66_A 145 VFAFGGYKVQGRGGKAQALLNDAKAHDDAG------AAVVLMECV---------------L---AELAKKVTETVSCPTI 200 (275)
T ss_dssp TTC-----------CHHHHHHHHHHHHHTT------CSEEEEESC---------------C---HHHHHHHHHHCSSCEE
T ss_pred ecccCCeEEEeChHHHHHHHHHHHHHHHcC------CcEEEEecC---------------C---HHHHHHHHHhCCCCEE
Confidence 1110011123567788899999999 666654321 1 1456789999999988
Q ss_pred EeCC
Q 025135 178 CSGG 181 (257)
Q Consensus 178 ~~G~ 181 (257)
+-|.
T Consensus 201 gIGa 204 (275)
T 1o66_A 201 GIGA 204 (275)
T ss_dssp EESS
T ss_pred EECC
Confidence 7653
No 376
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=93.57 E-value=0.29 Score=39.79 Aligned_cols=71 Identities=10% Similarity=0.118 Sum_probs=51.2
Q ss_pred cHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhC-CcEEEeCCC-CHHHHHH
Q 025135 112 PLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQ-GTFICSGGF-TRELGIQ 189 (257)
Q Consensus 112 ~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~G~i-t~~~a~~ 189 (257)
+.+++.++++.+.+.| +++++++-.. +.....++.+|+.++ ..+++.|.+ +++++++
T Consensus 20 ~~~~~~~~~~~~~~~G------~~~iev~~~~---------------~~~~~~i~~ir~~~~~~~~ig~~~v~~~~~~~~ 78 (205)
T 1wa3_A 20 SVEEAKEKALAVFEGG------VHLIEITFTV---------------PDADTVIKELSFLKEKGAIIGAGTVTSVEQCRK 78 (205)
T ss_dssp SHHHHHHHHHHHHHTT------CCEEEEETTS---------------TTHHHHHHHTHHHHHTTCEEEEESCCSHHHHHH
T ss_pred CHHHHHHHHHHHHHCC------CCEEEEeCCC---------------hhHHHHHHHHHHHCCCCcEEEecccCCHHHHHH
Confidence 4678899999999999 8888876421 112345677888764 235555565 8999999
Q ss_pred HHHcCCCcEEEechHH
Q 025135 190 ALAEDGADLVAYGRLF 205 (257)
Q Consensus 190 ~l~~g~~D~V~igR~~ 205 (257)
+++.| +|+| ++-.+
T Consensus 79 a~~~G-ad~i-v~~~~ 92 (205)
T 1wa3_A 79 AVESG-AEFI-VSPHL 92 (205)
T ss_dssp HHHHT-CSEE-ECSSC
T ss_pred HHHcC-CCEE-EcCCC
Confidence 99987 9999 76544
No 377
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=93.44 E-value=1.4 Score=39.73 Aligned_cols=89 Identities=12% Similarity=0.183 Sum_probs=56.4
Q ss_pred CChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-e
Q 025135 15 LQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-R 93 (257)
Q Consensus 15 lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~ 93 (257)
+..+.++++++ ...++|.|||-+.+..|-.. . =|.+.|.++ ++.++++++.. +
T Consensus 77 ID~~al~~lv~-------~li~~Gv~Gl~v~GTTGE~~--~-------------Ls~eEr~~v----i~~~ve~~~grvp 130 (360)
T 4dpp_A 77 FDLEAYDDLVN-------IQIQNGAEGVIVGGTTGEGQ--L-------------MSWDEHIML----IGHTVNCFGGSIK 130 (360)
T ss_dssp BCHHHHHHHHH-------HHHHTTCCEEEESSTTTTGG--G-------------SCHHHHHHH----HHHHHHHHTTTSE
T ss_pred cCHHHHHHHHH-------HHHHcCCCEEEecccccChh--h-------------CCHHHHHHH----HHHHHHHhCCCCe
Confidence 44444444444 45679999999977654210 0 134566555 44445555443 6
Q ss_pred EEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcc
Q 025135 94 VGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYT 145 (257)
Q Consensus 94 v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~ 145 (257)
|.+=++. .+.++++++++..++.| +|.+-+..|.|.
T Consensus 131 ViaGvg~----------~st~eai~la~~A~~~G------adavlvv~PyY~ 166 (360)
T 4dpp_A 131 VIGNTGS----------NSTREAIHATEQGFAVG------MHAALHINPYYG 166 (360)
T ss_dssp EEEECCC----------SSHHHHHHHHHHHHHTT------CSEEEEECCCSS
T ss_pred EEEecCC----------CCHHHHHHHHHHHHHcC------CCEEEEcCCCCC
Confidence 6654432 35788999999999999 888877777553
No 378
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=93.44 E-value=0.39 Score=52.35 Aligned_cols=56 Identities=20% Similarity=0.192 Sum_probs=44.6
Q ss_pred HHHHHHHHHhCCcEEEeCCC-CHHHHHHHH-----------HcCCCcEEEechHHhhC------chHHHHHHcCC
Q 025135 163 QLLRTWRRSYQGTFICSGGF-TRELGIQAL-----------AEDGADLVAYGRLFISN------PDLVLRFKLNA 219 (257)
Q Consensus 163 ~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l-----------~~g~~D~V~igR~~iad------P~l~~k~~~g~ 219 (257)
..+..|++.+++|||+.||| +.+....+| .=| +|.|.||.-|++- |.+-+.+.+-.
T Consensus 752 ~l~~~v~~~~~ipviaaGGi~dg~~~~aaL~g~w~~~~g~~~lg-adGv~~GTrf~~t~Ea~~~~~~K~~iv~a~ 825 (2051)
T 2uv8_G 752 QMYSKIRRHPNIMLIFGSGFGSADDTYPYLTGEWSTKFDYPPMP-FDGFLFGSRVMIAKEVKTSPDAKKCIAACT 825 (2051)
T ss_dssp HHHHHHTTCTTBCCEEESSCCSHHHHTHHHHTCGGGTTTCCCCC-CSCEECSGGGTTSTTSCCCHHHHHHHHTCC
T ss_pred HHHHHHHhcCCceEEEeCCCCCHHHHHHHHccccccccCccCCC-CceeeechHHHhCcccccCHHHHHHHHhCC
Confidence 45677899999999999999 999999999 455 9999999999953 45555565533
No 379
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=93.41 E-value=4.5 Score=37.56 Aligned_cols=138 Identities=17% Similarity=0.195 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAID 103 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~ 103 (257)
++.|++ ++.++|.|.|.|..+. |. .+-+.+.++.+|+. |. .+.+-++....
T Consensus 102 ~~~~v~---~a~~~Gvd~i~if~~~--------sd----------------~~ni~~~i~~ak~~-G~-~v~~~i~~~~~ 152 (464)
T 2nx9_A 102 VDTFVE---RAVKNGMDVFRVFDAM--------ND----------------VRNMQQALQAVKKM-GA-HAQGTLCYTTS 152 (464)
T ss_dssp HHHHHH---HHHHTTCCEEEECCTT--------CC----------------THHHHHHHHHHHHT-TC-EEEEEEECCCC
T ss_pred hHHHHH---HHHhCCcCEEEEEEec--------CH----------------HHHHHHHHHHHHHC-CC-EEEEEEEeeeC
Confidence 444444 4567899999987543 11 13466777777764 33 34334442211
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCC--
Q 025135 104 HLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGG-- 181 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~-- 181 (257)
. ..+.+...++++.+.++| ++.|.+.... + ...+......++.+++.+++||-.=..
T Consensus 153 ---~--~~~~e~~~~~a~~l~~~G------ad~I~l~DT~----G------~~~P~~v~~lv~~l~~~~~~~i~~H~Hnd 211 (464)
T 2nx9_A 153 ---P--VHNLQTWVDVAQQLAELG------VDSIALKDMA----G------ILTPYAAEELVSTLKKQVDVELHLHCHST 211 (464)
T ss_dssp ---T--TCCHHHHHHHHHHHHHTT------CSEEEEEETT----S------CCCHHHHHHHHHHHHHHCCSCEEEEECCT
T ss_pred ---C--CCCHHHHHHHHHHHHHCC------CCEEEEcCCC----C------CcCHHHHHHHHHHHHHhcCCeEEEEECCC
Confidence 1 135788999999999999 7777665421 1 112334456778888888777543222
Q ss_pred --CCHHHHHHHHHcCCCcEEE-----echHHhhCchHHH
Q 025135 182 --FTRELGIQALAEDGADLVA-----YGRLFISNPDLVL 213 (257)
Q Consensus 182 --it~~~a~~~l~~g~~D~V~-----igR~~iadP~l~~ 213 (257)
+-...+..+++.| ||.|- +|.+ ..||.+-.
T Consensus 212 ~GlAvAN~laAv~AG-a~~VD~ti~g~ger-tGN~~lE~ 248 (464)
T 2nx9_A 212 AGLADMTLLKAIEAG-VDRVDTAISSMSGT-YGHPATES 248 (464)
T ss_dssp TSCHHHHHHHHHHTT-CSEEEEBCGGGCST-TSCCBHHH
T ss_pred CChHHHHHHHHHHhC-CCEEEEeccccCCC-CcCHHHHH
Confidence 2256778899988 88775 4444 56886543
No 380
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=93.38 E-value=0.15 Score=57.62 Aligned_cols=52 Identities=19% Similarity=0.174 Sum_probs=42.3
Q ss_pred HHHHHHhCCcEEEeCCC-CHHHHHHHH-----------HcCCCcEEEechHHhhC------chHHHHHHcC
Q 025135 166 RTWRRSYQGTFICSGGF-TRELGIQAL-----------AEDGADLVAYGRLFISN------PDLVLRFKLN 218 (257)
Q Consensus 166 ~~ir~~~~~pvi~~G~i-t~~~a~~~l-----------~~g~~D~V~igR~~iad------P~l~~k~~~g 218 (257)
..+++..++||++.||| +++++..+| .-| +|.|.||..|++= |.+-+.+.+-
T Consensus 599 ~~ir~~~~iPViaaGGI~d~~~vaaal~g~ws~~~~~p~lG-AdGV~vGTrfl~t~Ea~~s~~~K~~l~~a 668 (3089)
T 3zen_D 599 SELRSRSNITICVGGGIGTPERSAEYLSGRWAEVHGYPLMP-IDGILVGTAAMATLEATTSPQVKQLLVET 668 (3089)
T ss_dssp HHHTTCTTEEEEEESSCCCTTTTHHHHHTGGGGTTTCCCCC-CSEEECSSTTTTCTTSCBCHHHHHHHHHC
T ss_pred HHHhhcCCCeEEEEeCCCCHHHHHHHhccccccccCccCCC-CCEEEecHHHHhCcccCCCHHHHHHHHhC
Confidence 66777789999999999 999999999 776 9999999999954 3455555543
No 381
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=93.22 E-value=0.13 Score=42.98 Aligned_cols=74 Identities=15% Similarity=0.143 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCCCHH--HHHHHH
Q 025135 114 GLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGFTRE--LGIQAL 191 (257)
Q Consensus 114 ~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~it~~--~a~~~l 191 (257)
+....+++...+.| ++.+.++. .. ...++.+|+.++..+++++||.++ +..+++
T Consensus 115 ~~v~~~a~~a~~~G------~~GvV~sa---------------t~---~~e~~~ir~~~~~f~~v~pGI~~~g~~~~~a~ 170 (215)
T 3ve9_A 115 AFYPYLREVARRVN------PKGFVAPA---------------TR---PSMISRVKGDFPDKLVISPGVGTQGAKPGIAL 170 (215)
T ss_dssp GGHHHHHHHHHHHC------CSEEECCT---------------TS---HHHHHHHHHHCTTSEEEECCTTSTTCCTTHHH
T ss_pred HHHHHHHHHHHHcC------CCceeeCC---------------CC---HHHHHHHHHhCCCcEEEcCCCCcCcCCHHHHH
Confidence 44567888888888 66554321 11 234566888776567777999666 567788
Q ss_pred HcCCCcEEEechHHhhCchHH
Q 025135 192 AEDGADLVAYGRLFISNPDLV 212 (257)
Q Consensus 192 ~~g~~D~V~igR~~iadP~l~ 212 (257)
+.| +|++.+||+.+.-+|-.
T Consensus 171 ~~G-ad~iVvGr~I~~a~dp~ 190 (215)
T 3ve9_A 171 CHG-ADYEIVGRSVYQSADPV 190 (215)
T ss_dssp HTT-CSEEEECHHHHTSSSHH
T ss_pred HcC-CCEEEeCHHHcCCCCHH
Confidence 877 99999999999755443
No 382
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=93.21 E-value=0.67 Score=38.30 Aligned_cols=44 Identities=18% Similarity=0.066 Sum_probs=33.4
Q ss_pred hCCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhh-----CchHHHHH
Q 025135 172 YQGTFICSGGFTRELGIQALAEDGADLVAYGRLFIS-----NPDLVLRF 215 (257)
Q Consensus 172 ~~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~ia-----dP~l~~k~ 215 (257)
.+.|+++.||++++...++|+.-..+.|-+..++=. ||+.++++
T Consensus 150 ~~~p~~LAGGL~peNV~~ai~~~~p~gVDvsSGvE~~pG~KD~~ki~~f 198 (205)
T 1nsj_A 150 RFRYLVLSGGLNPENVRSAIDVVRPFAVDVSSGVEAFPGKKDHDSIKMF 198 (205)
T ss_dssp GSSCEEEESSCCTTTHHHHHHHHCCSEEEESGGGEEETTEECHHHHHHH
T ss_pred CCCcEEEECCCCHHHHHHHHHhcCCCEEEECCceecCCCCcCHHHHHHH
Confidence 368999999999999988887645888888877653 55554443
No 383
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=92.98 E-value=0.5 Score=40.86 Aligned_cols=77 Identities=16% Similarity=-0.012 Sum_probs=57.4
Q ss_pred HHHHHHHHHhcCCccCCceeEEEeeC-CCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHHHc
Q 025135 116 GLAVIQGLNKLQIDQGAKLTYLHVTQ-PRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQALAE 193 (257)
Q Consensus 116 ~~~l~~~L~~~G~~~~~~vd~i~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~~ 193 (257)
..++++..++.| +++|++.. +.+. ......++.+|+.+++||+.-+.+ ++.+..++.+.
T Consensus 74 p~~~A~~y~~~G------A~~isvltd~~~f-------------~Gs~~~l~~ir~~v~lPvl~kdfiid~~qv~~A~~~ 134 (272)
T 3qja_A 74 PAKLAQAYQDGG------ARIVSVVTEQRRF-------------QGSLDDLDAVRASVSIPVLRKDFVVQPYQIHEARAH 134 (272)
T ss_dssp HHHHHHHHHHTT------CSEEEEECCGGGH-------------HHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHT
T ss_pred HHHHHHHHHHcC------CCEEEEecChhhc-------------CCCHHHHHHHHHhCCCCEEECccccCHHHHHHHHHc
Confidence 467899999999 88898753 2110 112356778999999999987665 89889999888
Q ss_pred CCCcEEEechHHhhCchHH
Q 025135 194 DGADLVAYGRLFISNPDLV 212 (257)
Q Consensus 194 g~~D~V~igR~~iadP~l~ 212 (257)
| +|.|.++-+.+.+.++.
T Consensus 135 G-AD~VlLi~a~l~~~~l~ 152 (272)
T 3qja_A 135 G-ADMLLLIVAALEQSVLV 152 (272)
T ss_dssp T-CSEEEEEGGGSCHHHHH
T ss_pred C-CCEEEEecccCCHHHHH
Confidence 7 99999987777655543
No 384
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=92.73 E-value=1.1 Score=39.03 Aligned_cols=144 Identities=11% Similarity=0.050 Sum_probs=84.8
Q ss_pred HHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCC
Q 025135 29 QAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDAT 108 (257)
Q Consensus 29 ~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~ 108 (257)
+-.++|.++|+|.|-|..+.- +. +++...+-+++.-.+.+.++++.+|+. |. .|-.-|+..-...+.
T Consensus 87 ~~i~~a~~aG~~~v~i~~~~s--------~~--~~~~~~~~s~ee~l~~~~~~v~~a~~~-G~-~V~~~l~~~~~~e~~- 153 (302)
T 2ftp_A 87 KGFEAALESGVKEVAVFAAAS--------EA--FSQRNINCSIKDSLERFVPVLEAARQH-QV-RVRGYISCVLGCPYD- 153 (302)
T ss_dssp HHHHHHHHTTCCEEEEEEESC--------HH--HHHHHHSSCHHHHHHHHHHHHHHHHHT-TC-EEEEEEECTTCBTTT-
T ss_pred HHHHHHHhCCcCEEEEEEecC--------HH--HHHHHhCCCHHHHHHHHHHHHHHHHHC-CC-eEEEEEEEEeeCCcC-
Confidence 345577889999998754331 11 111122335676677788888888764 32 333333311000011
Q ss_pred CCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh-CCcEEEeC--C--CC
Q 025135 109 DSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY-QGTFICSG--G--FT 183 (257)
Q Consensus 109 ~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~G--~--it 183 (257)
...+.+...++++.+.+.| ++.|.+... .+ ...+......++.+++.+ ++|+..=+ + +.
T Consensus 154 ~~~~~~~~~~~~~~~~~~G------~d~i~l~DT----~G------~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla 217 (302)
T 2ftp_A 154 GDVDPRQVAWVARELQQMG------CYEVSLGDT----IG------VGTAGATRRLIEAVASEVPRERLAGHFHDTYGQA 217 (302)
T ss_dssp BCCCHHHHHHHHHHHHHTT------CSEEEEEES----SS------CCCHHHHHHHHHHHTTTSCGGGEEEEEBCTTSCH
T ss_pred CCCCHHHHHHHHHHHHHcC------CCEEEEeCC----CC------CcCHHHHHHHHHHHHHhCCCCeEEEEeCCCccHH
Confidence 1245788999999999999 777776531 11 012334456777888888 47765433 2 23
Q ss_pred HHHHHHHHHcCCCcEEEec
Q 025135 184 RELGIQALAEDGADLVAYG 202 (257)
Q Consensus 184 ~~~a~~~l~~g~~D~V~ig 202 (257)
...+..+++.| ++.|-.+
T Consensus 218 ~An~laAv~aG-a~~vd~t 235 (302)
T 2ftp_A 218 LANIYASLLEG-IAVFDSS 235 (302)
T ss_dssp HHHHHHHHHTT-CCEEEEB
T ss_pred HHHHHHHHHhC-CCEEEec
Confidence 67788999988 7777543
No 385
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=92.73 E-value=0.43 Score=43.12 Aligned_cols=40 Identities=13% Similarity=0.079 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHhCCcEEE---eCCCCHHHHHHHHHcCCCcEEEe
Q 025135 161 EAQLLRTWRRSYQGTFIC---SGGFTRELGIQALAEDGADLVAY 201 (257)
Q Consensus 161 ~~~~~~~ir~~~~~pvi~---~G~it~~~a~~~l~~g~~D~V~i 201 (257)
..+.++.+++.+++||++ ++++++++|..+.+.| +|+|.+
T Consensus 175 ~~~~i~~i~~~~~vPVivK~vG~g~s~~~A~~l~~aG-ad~I~V 217 (368)
T 3vkj_A 175 ALEKLRDISKELSVPIIVKESGNGISMETAKLLYSYG-IKNFDT 217 (368)
T ss_dssp HHHHHHHHHTTCSSCEEEECSSSCCCHHHHHHHHHTT-CCEEEC
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHhCC-CCEEEE
Confidence 466788899999999988 3456999999999888 999987
No 386
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=92.50 E-value=2 Score=37.14 Aligned_cols=144 Identities=15% Similarity=0.074 Sum_probs=85.1
Q ss_pred HHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCC
Q 025135 29 QAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDAT 108 (257)
Q Consensus 29 ~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~ 108 (257)
+..++|.++|+|.|-|..+-- +..++ ...+-+.+.-.+.+.++++.+|+. |. .|..-++..-+..+.
T Consensus 83 ~~i~~a~~~G~~~V~i~~~~S--------~~h~~--~~~~~~~~e~~~~~~~~v~~a~~~-G~-~V~~~l~~~~~~e~~- 149 (295)
T 1ydn_A 83 KGYEAAAAAHADEIAVFISAS--------EGFSK--ANINCTIAESIERLSPVIGAAIND-GL-AIRGYVSCVVECPYD- 149 (295)
T ss_dssp HHHHHHHHTTCSEEEEEEESC--------HHHHH--HHTSSCHHHHHHHHHHHHHHHHHT-TC-EEEEEEECSSEETTT-
T ss_pred HHHHHHHHCCCCEEEEEEecC--------HHHHH--HHcCCCHHHHHHHHHHHHHHHHHc-CC-eEEEEEEEEecCCcC-
Confidence 345678889999998864321 11111 122334566677888888888864 32 333234321000111
Q ss_pred CCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhC-CcEEEeC----CCC
Q 025135 109 DSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQ-GTFICSG----GFT 183 (257)
Q Consensus 109 ~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~G----~it 183 (257)
...+.+...++++.+.+.| ++.|.+... .+ ...+......++.+++.++ +|+..=+ |+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~G------~d~i~l~Dt----~G------~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla 213 (295)
T 1ydn_A 150 GPVTPQAVASVTEQLFSLG------CHEVSLGDT----IG------RGTPDTVAAMLDAVLAIAPAHSLAGHYHDTGGRA 213 (295)
T ss_dssp EECCHHHHHHHHHHHHHHT------CSEEEEEET----TS------CCCHHHHHHHHHHHHTTSCGGGEEEEEBCTTSCH
T ss_pred CCCCHHHHHHHHHHHHhcC------CCEEEecCC----CC------CcCHHHHHHHHHHHHHhCCCCeEEEEECCCcchH
Confidence 1235788899999999999 777776531 11 0123344567788888887 6765433 223
Q ss_pred HHHHHHHHHcCCCcEEEec
Q 025135 184 RELGIQALAEDGADLVAYG 202 (257)
Q Consensus 184 ~~~a~~~l~~g~~D~V~ig 202 (257)
...+..+++.| ++.|-.+
T Consensus 214 ~an~l~Ai~aG-~~~vd~s 231 (295)
T 1ydn_A 214 LDNIRVSLEKG-LRVFDAS 231 (295)
T ss_dssp HHHHHHHHHHT-CCEEEEB
T ss_pred HHHHHHHHHhC-CCEEEec
Confidence 56778889888 7776554
No 387
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=92.49 E-value=1.6 Score=36.17 Aligned_cols=116 Identities=16% Similarity=0.191 Sum_probs=66.3
Q ss_pred HHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCC
Q 025135 28 RQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDA 107 (257)
Q Consensus 28 ~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~ 107 (257)
.+.|+.+.++|+++|++. + .+.++.||+.++. |+ +.+.. .+|.+.
T Consensus 39 ~~~a~~~~~~G~~~i~~~------------------------~--------~~~i~~i~~~~~~-p~-i~~~~-~~~~~~ 83 (234)
T 1yxy_A 39 PLMAKAAQEAGAVGIRAN------------------------S--------VRDIKEIQAITDL-PI-IGIIK-KDYPPQ 83 (234)
T ss_dssp HHHHHHHHHHTCSEEEEE------------------------S--------HHHHHHHHTTCCS-CE-EEECB-CCCTTS
T ss_pred HHHHHHHHHCCCcEeecC------------------------C--------HHHHHHHHHhCCC-CE-EeeEc-CCCCcc
Confidence 444556677899999863 0 1458888888753 54 22211 122221
Q ss_pred C--CCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh-CCcEEEeCCCCH
Q 025135 108 T--DSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY-QGTFICSGGFTR 184 (257)
Q Consensus 108 ~--~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~G~it~ 184 (257)
. -..+. +.++.+.++| +++++++......+. .....+.++.+++.+ +.+|+. +-.|+
T Consensus 84 ~~~i~~~~----~~i~~~~~~G------ad~V~l~~~~~~~~~---------~~~~~~~i~~i~~~~~~~~v~~-~~~t~ 143 (234)
T 1yxy_A 84 EPFITATM----TEVDQLAALN------IAVIAMDCTKRDRHD---------GLDIASFIRQVKEKYPNQLLMA-DISTF 143 (234)
T ss_dssp CCCBSCSH----HHHHHHHTTT------CSEEEEECCSSCCTT---------CCCHHHHHHHHHHHCTTCEEEE-ECSSH
T ss_pred ccccCChH----HHHHHHHHcC------CCEEEEcccccCCCC---------CccHHHHHHHHHHhCCCCeEEE-eCCCH
Confidence 1 11222 3356677889 888887653211100 012245677788776 344433 22389
Q ss_pred HHHHHHHHcCCCcEE
Q 025135 185 ELGIQALAEDGADLV 199 (257)
Q Consensus 185 ~~a~~~l~~g~~D~V 199 (257)
+++..+++.| +|+|
T Consensus 144 ~ea~~a~~~G-ad~i 157 (234)
T 1yxy_A 144 DEGLVAHQAG-IDFV 157 (234)
T ss_dssp HHHHHHHHTT-CSEE
T ss_pred HHHHHHHHcC-CCEE
Confidence 9999998887 9999
No 388
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=92.37 E-value=0.48 Score=40.88 Aligned_cols=103 Identities=16% Similarity=0.140 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEE--EccCC
Q 025135 25 DQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVR--MSPAI 102 (257)
Q Consensus 25 ~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vr--ls~~~ 102 (257)
++-++.|.+..++|.++|.|-.+. -..+.|+++.++ |. ||.-- |.|..
T Consensus 94 ~~a~~~a~rl~kaGa~aVklEgg~----------------------------e~~~~I~al~~a-gi-pV~gHiGLtPq~ 143 (264)
T 1m3u_A 94 EQAFENAATVMRAGANMVKIEGGE----------------------------WLVETVQMLTER-AV-PVCGHLGLTPQS 143 (264)
T ss_dssp HHHHHHHHHHHHTTCSEEECCCSG----------------------------GGHHHHHHHHHT-TC-CEEEEEESCGGG
T ss_pred HHHHHHHHHHHHcCCCEEEECCcH----------------------------HHHHHHHHHHHC-CC-CeEeeecCCcee
Confidence 344566667777999999987551 133445555443 32 44322 22211
Q ss_pred -----CCCCCCC-CCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcE
Q 025135 103 -----DHLDATD-SDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTF 176 (257)
Q Consensus 103 -----~~~~~~~-~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pv 176 (257)
+|.-.+. ....+..++=++.++++| .+.+-+... + ...++.|.+.+++|+
T Consensus 144 v~~~ggf~v~grt~~~a~~~i~rA~a~~eAG------A~~ivlE~v---------------p---~~~a~~it~~l~iP~ 199 (264)
T 1m3u_A 144 VNIFGGYKVQGRGDEAGDQLLSDALALEAAG------AQLLVLECV---------------P---VELAKRITEALAIPV 199 (264)
T ss_dssp HHHHTSSCCCCCSHHHHHHHHHHHHHHHHHT------CCEEEEESC---------------C---HHHHHHHHHHCSSCE
T ss_pred ecccCCeEEEeCCHHHHHHHHHHHHHHHHCC------CcEEEEecC---------------C---HHHHHHHHHhCCCCE
Confidence 2211111 112356777889999999 666654321 1 145678999999998
Q ss_pred EEeCC
Q 025135 177 ICSGG 181 (257)
Q Consensus 177 i~~G~ 181 (257)
|+-|.
T Consensus 200 igIGa 204 (264)
T 1m3u_A 200 IGIGA 204 (264)
T ss_dssp EEESS
T ss_pred EEeCC
Confidence 87654
No 389
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=92.29 E-value=0.55 Score=40.65 Aligned_cols=74 Identities=11% Similarity=-0.049 Sum_probs=55.5
Q ss_pred HHHHHHHHhcCCccCCceeEEEeeC-CCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHHHcC
Q 025135 117 LAVIQGLNKLQIDQGAKLTYLHVTQ-PRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQALAED 194 (257)
Q Consensus 117 ~~l~~~L~~~G~~~~~~vd~i~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~~g 194 (257)
.++++..++.| .+.|++.. +.+.+ + ....+..+++.+++||+.-..+ ++.+..++...|
T Consensus 82 ~~~A~~y~~~G------A~~IsVltd~~~f~----------G---s~~~L~~ir~~v~lPVl~Kdfi~d~~qi~ea~~~G 142 (272)
T 3tsm_A 82 PALAKAYEEGG------AACLSVLTDTPSFQ----------G---APEFLTAARQACSLPALRKDFLFDPYQVYEARSWG 142 (272)
T ss_dssp HHHHHHHHHTT------CSEEEEECCSTTTC----------C---CHHHHHHHHHTSSSCEEEESCCCSTHHHHHHHHTT
T ss_pred HHHHHHHHHCC------CCEEEEeccccccC----------C---CHHHHHHHHHhcCCCEEECCccCCHHHHHHHHHcC
Confidence 56899999999 88888743 22210 1 1345677999999999987776 888999998887
Q ss_pred CCcEEEechHHhhCch
Q 025135 195 GADLVAYGRLFISNPD 210 (257)
Q Consensus 195 ~~D~V~igR~~iadP~ 210 (257)
+|.|.+.-..+.+.+
T Consensus 143 -AD~VlLi~a~L~~~~ 157 (272)
T 3tsm_A 143 -ADCILIIMASVDDDL 157 (272)
T ss_dssp -CSEEEEETTTSCHHH
T ss_pred -CCEEEEcccccCHHH
Confidence 999999988775444
No 390
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=92.28 E-value=0.73 Score=38.61 Aligned_cols=80 Identities=24% Similarity=0.206 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHH
Q 025135 113 LGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQAL 191 (257)
Q Consensus 113 ~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l 191 (257)
.+++.++++.+.+.| ++.+.+... .....+.++.+++.++.-++..|-+ +.++++.++
T Consensus 28 ~~~~~~~~~al~~gG------v~~iel~~k---------------~~~~~~~i~~l~~~~~~l~vgaGtvl~~d~~~~A~ 86 (224)
T 1vhc_A 28 ADDILPLADTLAKNG------LSVAEITFR---------------SEAAADAIRLLRANRPDFLIAAGTVLTAEQVVLAK 86 (224)
T ss_dssp GGGHHHHHHHHHHTT------CCEEEEETT---------------STTHHHHHHHHHHHCTTCEEEEESCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC------CCEEEEecc---------------CchHHHHHHHHHHhCcCcEEeeCcEeeHHHHHHHH
Confidence 456788999999999 888988642 1122356677888875445566666 899999999
Q ss_pred HcCCCcEEEechHHhhCchHHHHHHc
Q 025135 192 AEDGADLVAYGRLFISNPDLVLRFKL 217 (257)
Q Consensus 192 ~~g~~D~V~igR~~iadP~l~~k~~~ 217 (257)
+.| +|+|..+- .|+++++..++
T Consensus 87 ~aG-Ad~v~~p~---~d~~v~~~ar~ 108 (224)
T 1vhc_A 87 SSG-ADFVVTPG---LNPKIVKLCQD 108 (224)
T ss_dssp HHT-CSEEECSS---CCHHHHHHHHH
T ss_pred HCC-CCEEEECC---CCHHHHHHHHH
Confidence 998 99998883 67777666554
No 391
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=92.28 E-value=0.83 Score=39.84 Aligned_cols=87 Identities=10% Similarity=0.009 Sum_probs=54.7
Q ss_pred HHHHHHHHHHhCCCeEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCc
Q 025135 79 MQLVREVIVAIGADRVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTE 158 (257)
Q Consensus 79 ~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~ 158 (257)
.+.++++|+..+..+|.|-.. +.+++.+ ..++| +|+|-+... .
T Consensus 186 ~~Av~~ar~~~~~~~IeVEv~------------tl~ea~e----Al~aG------aD~I~LDn~---------------~ 228 (287)
T 3tqv_A 186 AKAVTKAKKLDSNKVVEVEVT------------NLDELNQ----AIAAK------ADIVMLDNF---------------S 228 (287)
T ss_dssp HHHHHHHHHHCTTSCEEEEES------------SHHHHHH----HHHTT------CSEEEEESC---------------C
T ss_pred HHHHHHHHhhCCCCcEEEEeC------------CHHHHHH----HHHcC------CCEEEEcCC---------------C
Confidence 456677777633225666442 3444433 33568 888876541 1
Q ss_pred hhHHHHHHHHHHHh--CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHh
Q 025135 159 DEEAQLLRTWRRSY--QGTFICSGGFTRELGIQALAEDGADLVAYGRLFI 206 (257)
Q Consensus 159 ~~~~~~~~~ir~~~--~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~i 206 (257)
+ ..++++.+.+ ++++.++||+|++.+.++.+.| +|+|++|.-.-
T Consensus 229 ~---~~l~~av~~~~~~v~ieaSGGIt~~~i~~~a~tG-VD~IsvGalt~ 274 (287)
T 3tqv_A 229 G---EDIDIAVSIARGKVALEVSGNIDRNSIVAIAKTG-VDFISVGAITK 274 (287)
T ss_dssp H---HHHHHHHHHHTTTCEEEEESSCCTTTHHHHHTTT-CSEEECSHHHH
T ss_pred H---HHHHHHHHhhcCCceEEEECCCCHHHHHHHHHcC-CCEEEEChhhc
Confidence 1 2233333333 4679999999999999988877 99999986543
No 392
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=92.27 E-value=1.9 Score=38.16 Aligned_cols=139 Identities=11% Similarity=0.075 Sum_probs=82.5
Q ss_pred HHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCCC
Q 025135 30 AALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDATD 109 (257)
Q Consensus 30 AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~ 109 (257)
-.++|.++|.|.|.|..+- |+ .+.+...+-+.+.-.+.+.++++.+|+. |. -++++.. ++.+. .
T Consensus 101 ~i~~a~~~g~~~v~i~~~~--------s~--~~~~~~~~~s~~e~l~~~~~~v~~ak~~-G~---~v~~~~~-~~~~~-~ 164 (337)
T 3ble_A 101 TVDWIKDSGAKVLNLLTKG--------SL--HHLEKQLGKTPKEFFTDVSFVIEYAIKS-GL---KINVYLE-DWSNG-F 164 (337)
T ss_dssp HHHHHHHHTCCEEEEEEEC--------SH--HHHHHHTCCCHHHHHHHHHHHHHHHHHT-TC---EEEEEEE-THHHH-H
T ss_pred hHHHHHHCCCCEEEEEEec--------CH--HHHHHHhCCCHHHHHHHHHHHHHHHHHC-CC---EEEEEEE-ECCCC-C
Confidence 3567788999998886543 11 1122233445666667777778777764 32 2444432 11000 0
Q ss_pred CCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh-CCcEEEeCCC-C----
Q 025135 110 SDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY-QGTFICSGGF-T---- 183 (257)
Q Consensus 110 ~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~G~i-t---- 183 (257)
..+.+...++++.+.++| ++.|.+.... + ...+......++.+++.+ ++||-. ... |
T Consensus 165 ~~~~~~~~~~~~~~~~~G------a~~i~l~DT~----G------~~~P~~v~~lv~~l~~~~p~~~i~~-H~Hnd~GlA 227 (337)
T 3ble_A 165 RNSPDYVKSLVEHLSKEH------IERIFLPDTL----G------VLSPEETFQGVDSLIQKYPDIHFEF-HGHNDYDLS 227 (337)
T ss_dssp HHCHHHHHHHHHHHHTSC------CSEEEEECTT----C------CCCHHHHHHHHHHHHHHCTTSCEEE-ECBCTTSCH
T ss_pred cCCHHHHHHHHHHHHHcC------CCEEEEecCC----C------CcCHHHHHHHHHHHHHhcCCCeEEE-EecCCcchH
Confidence 123677888999999999 7777765421 1 112334456777888888 566543 222 2
Q ss_pred HHHHHHHHHcCCCcEEEec
Q 025135 184 RELGIQALAEDGADLVAYG 202 (257)
Q Consensus 184 ~~~a~~~l~~g~~D~V~ig 202 (257)
...+..+++.| +|.|-.+
T Consensus 228 ~AN~laAv~aG-a~~vd~t 245 (337)
T 3ble_A 228 VANSLQAIRAG-VKGLHAS 245 (337)
T ss_dssp HHHHHHHHHTT-CSEEEEB
T ss_pred HHHHHHHHHhC-CCEEEEe
Confidence 56677889987 8877643
No 393
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=92.19 E-value=2.4 Score=37.67 Aligned_cols=132 Identities=16% Similarity=0.103 Sum_probs=79.2
Q ss_pred HHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCC
Q 025135 29 QAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDAT 108 (257)
Q Consensus 29 ~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~ 108 (257)
+-.++|.++|.|+|-|.... |. .+...++++.+|+. |.. +..+....+
T Consensus 97 ~~i~~a~~aGvd~v~I~~~~--------s~----------------~~~~~~~i~~ak~~-G~~---v~~~~~~a~---- 144 (345)
T 1nvm_A 97 HDLKNAYQAGARVVRVATHC--------TE----------------ADVSKQHIEYARNL-GMD---TVGFLMMSH---- 144 (345)
T ss_dssp HHHHHHHHHTCCEEEEEEET--------TC----------------GGGGHHHHHHHHHH-TCE---EEEEEESTT----
T ss_pred HHHHHHHhCCcCEEEEEEec--------cH----------------HHHHHHHHHHHHHC-CCE---EEEEEEeCC----
Confidence 34567778999999885322 10 12356777777765 432 222221111
Q ss_pred CCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh--CCcEEEeC----CC
Q 025135 109 DSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY--QGTFICSG----GF 182 (257)
Q Consensus 109 ~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~G----~i 182 (257)
..+.+...++++.+.+.| ++.|.+.... + ...+......++.+|+.+ ++||-.=. |+
T Consensus 145 -~~~~e~~~~ia~~~~~~G------a~~i~l~DT~----G------~~~P~~v~~lv~~l~~~~~~~~pi~~H~Hn~~G~ 207 (345)
T 1nvm_A 145 -MIPAEKLAEQGKLMESYG------ATCIYMADSG----G------AMSMNDIRDRMRAFKAVLKPETQVGMHAHHNLSL 207 (345)
T ss_dssp -SSCHHHHHHHHHHHHHHT------CSEEEEECTT----C------CCCHHHHHHHHHHHHHHSCTTSEEEEECBCTTSC
T ss_pred -CCCHHHHHHHHHHHHHCC------CCEEEECCCc----C------ccCHHHHHHHHHHHHHhcCCCceEEEEECCCccH
Confidence 135788899999999999 7777765421 1 112334456778899998 56765422 22
Q ss_pred CHHHHHHHHHcCCCcEE-----EechHHhhCchH
Q 025135 183 TRELGIQALAEDGADLV-----AYGRLFISNPDL 211 (257)
Q Consensus 183 t~~~a~~~l~~g~~D~V-----~igR~~iadP~l 211 (257)
-...+..+++.| ||.| ++|.. ..|+.+
T Consensus 208 avAn~laA~~aG-a~~vd~tv~GlG~~-aGN~~l 239 (345)
T 1nvm_A 208 GVANSIVAVEEG-CDRVDASLAGMGAG-AGNAPL 239 (345)
T ss_dssp HHHHHHHHHHTT-CCEEEEBGGGCSST-TCBCBH
T ss_pred HHHHHHHHHHcC-CCEEEecchhccCC-ccCcCH
Confidence 366778889988 6655 44543 356754
No 394
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=92.10 E-value=0.89 Score=39.85 Aligned_cols=86 Identities=12% Similarity=0.032 Sum_probs=53.5
Q ss_pred HHHHHHHHHHhCCCeEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCc
Q 025135 79 MQLVREVIVAIGADRVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTE 158 (257)
Q Consensus 79 ~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~ 158 (257)
.+-++++|+..+..+|.|-.. +.+++. ...++| +|.|-+... .
T Consensus 197 ~~Av~~~r~~~p~~~ieVEvd------------tlde~~----eAl~aG------aD~I~LDn~---------------~ 239 (298)
T 3gnn_A 197 GEALDAAFALNAEVPVQIEVE------------TLDQLR----TALAHG------ARSVLLDNF---------------T 239 (298)
T ss_dssp HHHHHHHHHHC--CCCEEEES------------SHHHHH----HHHHTT------CEEEEEESC---------------C
T ss_pred HHHHHHHHHhCCCCCEEEEeC------------CHHHHH----HHHHcC------CCEEEECCC---------------C
Confidence 466777787776435555543 344433 333478 888776542 1
Q ss_pred hhHHHHHHHHHHHh--CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHH
Q 025135 159 DEEAQLLRTWRRSY--QGTFICSGGFTRELGIQALAEDGADLVAYGRLF 205 (257)
Q Consensus 159 ~~~~~~~~~ir~~~--~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~ 205 (257)
+ ..+++..+.+ .+++.++||+|++...++.+.| +|++++|..-
T Consensus 240 ~---~~l~~av~~i~~~v~ieaSGGI~~~~i~~~a~tG-VD~isvG~lt 284 (298)
T 3gnn_A 240 L---DMMRDAVRVTEGRAVLEVSGGVNFDTVRAIAETG-VDRISIGALT 284 (298)
T ss_dssp H---HHHHHHHHHHTTSEEEEEESSCSTTTHHHHHHTT-CSEEECGGGG
T ss_pred H---HHHHHHHHHhCCCCeEEEEcCCCHHHHHHHHHcC-CCEEEECCee
Confidence 1 1222222222 3568899999999999998887 9999999843
No 395
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=92.09 E-value=1.5 Score=36.82 Aligned_cols=79 Identities=23% Similarity=0.201 Sum_probs=57.7
Q ss_pred cHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEe-----CC---C-
Q 025135 112 PLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICS-----GG---F- 182 (257)
Q Consensus 112 ~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~-----G~---i- 182 (257)
+.....++++..++.| ...|.+.. ...++.+|+.+++||++. ++ +
T Consensus 34 ~~~~~~~~A~a~~~~G------a~~i~~~~--------------------~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I 87 (229)
T 3q58_A 34 KPEIVAAMAQAAASAG------AVAVRIEG--------------------IENLRTVRPHLSVPIIGIIKRDLTGSPVRI 87 (229)
T ss_dssp SHHHHHHHHHHHHHTT------CSEEEEES--------------------HHHHHHHGGGCCSCEEEECBCCCSSCCCCB
T ss_pred CcchHHHHHHHHHHCC------CcEEEECC--------------------HHHHHHHHHhcCCCEEEEEeecCCCCceEe
Confidence 3567889999999999 66666421 245688999999998742 11 2
Q ss_pred C--HHHHHHHHHcCCCcEEEechHHhhCc----hHHHHHHc
Q 025135 183 T--RELGIQALAEDGADLVAYGRLFISNP----DLVLRFKL 217 (257)
Q Consensus 183 t--~~~a~~~l~~g~~D~V~igR~~iadP----~l~~k~~~ 217 (257)
+ .+++.++++.| +|+|.+.-....+| ++++++++
T Consensus 88 ~~~~~~i~~~~~aG-ad~I~l~~~~~~~p~~l~~~i~~~~~ 127 (229)
T 3q58_A 88 TPYLQDVDALAQAG-ADIIAFDASFRSRPVDIDSLLTRIRL 127 (229)
T ss_dssp SCSHHHHHHHHHHT-CSEEEEECCSSCCSSCHHHHHHHHHH
T ss_pred CccHHHHHHHHHcC-CCEEEECccccCChHHHHHHHHHHHH
Confidence 4 46888999888 99999877666666 45666665
No 396
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=92.00 E-value=0.57 Score=38.94 Aligned_cols=79 Identities=11% Similarity=0.088 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHH
Q 025135 113 LGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQAL 191 (257)
Q Consensus 113 ~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l 191 (257)
.+++.++++.+.+.| ++.+.+.... +...+.++.+++.++..++..|-+ +.++++.++
T Consensus 27 ~~~~~~~~~al~~gG------v~~iel~~k~---------------~~~~~~i~~l~~~~~~~~vgagtvi~~d~~~~A~ 85 (214)
T 1wbh_A 27 LEHAVPMAKALVAGG------VRVLNVTLRT---------------ECAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVT 85 (214)
T ss_dssp GGGHHHHHHHHHHTT------CCEEEEESCS---------------TTHHHHHHHHHHHCTTSEEEEESCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC------CCEEEEeCCC---------------hhHHHHHHHHHHHCcCCEEeeCEEEEHHHHHHHH
Confidence 456788999999999 8899886421 122356677888876556666777 899999999
Q ss_pred HcCCCcEEEechHHhhCchHHHHHH
Q 025135 192 AEDGADLVAYGRLFISNPDLVLRFK 216 (257)
Q Consensus 192 ~~g~~D~V~igR~~iadP~l~~k~~ 216 (257)
+.| +|+|..+- .|++..+..+
T Consensus 86 ~aG-Ad~v~~p~---~d~~v~~~~~ 106 (214)
T 1wbh_A 86 EAG-AQFAISPG---LTEPLLKAAT 106 (214)
T ss_dssp HHT-CSCEEESS---CCHHHHHHHH
T ss_pred HcC-CCEEEcCC---CCHHHHHHHH
Confidence 998 99999883 5777765444
No 397
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=91.84 E-value=4.6 Score=35.21 Aligned_cols=140 Identities=7% Similarity=0.055 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCC---chhhHhhHHHHHHHHHHHHh-CCC-eEEEEEcc
Q 025135 26 QYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGG---SIENRCRFLMQLVREVIVAI-GAD-RVGVRMSP 100 (257)
Q Consensus 26 ~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGG---s~enR~r~~~eiv~aiR~~v-g~~-~v~vrls~ 100 (257)
+..+.+++..++|..||.|-.+-. .+|....|| .+.... -..+-|++++++. +.+ .|.-|...
T Consensus 95 ~v~~~v~~l~~aGaagv~iED~~~-----------~k~cgH~gg~~k~l~p~~-e~~~rI~Aa~~a~~~~~~~i~aRtda 162 (295)
T 1s2w_A 95 NARRLVRKLEDRGVAGACLEDKLF-----------PKTNSLHDGRAQPLADIE-EFALKIKACKDSQTDPDFCIVARVEA 162 (295)
T ss_dssp HHHHHHHHHHHTTCCEEEEECBCC-------------------CTTCCBCCHH-HHHHHHHHHHHHCSSTTCEEEEEECT
T ss_pred HHHHHHHHHHHcCCcEEEECCCCC-----------CccccccCCCCCcccCHH-HHHHHHHHHHHhcccCCcEEEEeehH
Confidence 445667777899999999976631 244444443 122111 2344556666554 333 46667643
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhC--CcEEE
Q 025135 101 AIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQ--GTFIC 178 (257)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~--~pvi~ 178 (257)
. .. ....+++++=++.++++| .|.|-+..+. + ..+.++.|.+.++ +|+++
T Consensus 163 ~--~a----~~g~~~ai~Ra~ay~eAG------Ad~i~~e~~~--------------~--~~~~~~~i~~~~~~~~P~i~ 214 (295)
T 1s2w_A 163 F--IA----GWGLDEALKRAEAYRNAG------ADAILMHSKK--------------A--DPSDIEAFMKAWNNQGPVVI 214 (295)
T ss_dssp T--TT----TCCHHHHHHHHHHHHHTT------CSEEEECCCS--------------S--SSHHHHHHHHHHTTCSCEEE
T ss_pred H--hc----cccHHHHHHHHHHHHHcC------CCEEEEcCCC--------------C--CHHHHHHHHHHcCCCCCEEE
Confidence 1 01 123788899999999999 6766553210 0 0134566777777 89888
Q ss_pred eCC-CCHHHHHHHHHcCCCcEEEechHHh
Q 025135 179 SGG-FTRELGIQALAEDGADLVAYGRLFI 206 (257)
Q Consensus 179 ~G~-it~~~a~~~l~~g~~D~V~igR~~i 206 (257)
+-. +..-..+++-+-| +..|.++-.++
T Consensus 215 ~~~~~~~~~~~eL~~lG-v~~v~~~~~~~ 242 (295)
T 1s2w_A 215 VPTKYYKTPTDHFRDMG-VSMVIWANHNL 242 (295)
T ss_dssp CCSTTTTSCHHHHHHHT-CCEEEECSHHH
T ss_pred eCCCCCCCCHHHHHHcC-CcEEEEChHHH
Confidence 722 2001144555556 99999997766
No 398
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=91.84 E-value=0.59 Score=42.18 Aligned_cols=67 Identities=16% Similarity=0.121 Sum_probs=47.1
Q ss_pred HHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh-CCcEEEeCCCCHHHHHHHHHcCC
Q 025135 117 LAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY-QGTFICSGGFTRELGIQALAEDG 195 (257)
Q Consensus 117 ~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~G~it~~~a~~~l~~g~ 195 (257)
.+.++.|.++| +++|++....- ......+.++.+++.+ ++||++..-.|+++|.++++.|
T Consensus 110 ~~~~~~lieaG------vd~I~idta~G------------~~~~~~~~I~~ik~~~p~v~Vi~G~v~t~e~A~~a~~aG- 170 (366)
T 4fo4_A 110 EERVKALVEAG------VDVLLIDSSHG------------HSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAG- 170 (366)
T ss_dssp HHHHHHHHHTT------CSEEEEECSCT------------TSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHT-
T ss_pred HHHHHHHHhCC------CCEEEEeCCCC------------CCHHHHHHHHHHHHhcCCCceEeeeeCCHHHHHHHHHcC-
Confidence 34577888899 88888743210 1223445677888887 5677663334999999999998
Q ss_pred CcEEEec
Q 025135 196 ADLVAYG 202 (257)
Q Consensus 196 ~D~V~ig 202 (257)
+|+|.+|
T Consensus 171 AD~I~vG 177 (366)
T 4fo4_A 171 VSAVKVG 177 (366)
T ss_dssp CSEEEEC
T ss_pred CCEEEEe
Confidence 9999984
No 399
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=91.81 E-value=5.8 Score=34.17 Aligned_cols=135 Identities=14% Similarity=0.140 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHh---CCC-eEEEEEcc
Q 025135 25 DQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAI---GAD-RVGVRMSP 100 (257)
Q Consensus 25 ~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~v---g~~-~v~vrls~ 100 (257)
++..+.+++..++|..||.|-.+-+ + . |..+-.. .-..+.|++++++. |.+ .|.-|...
T Consensus 92 ~~~~~~v~~l~~aGaagv~iED~~~--------~-~-------~k~l~~~-~e~~~~I~aa~~a~~~~g~~~~i~aRtda 154 (275)
T 2ze3_A 92 EDVRRTVEHFAALGVAGVNLEDATG--------L-T-------PTELYDL-DSQLRRIEAARAAIDASGVPVFLNARTDT 154 (275)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECBCS--------S-S-------SSCBCCH-HHHHHHHHHHHHHHHHHTSCCEEEEECCT
T ss_pred HHHHHHHHHHHHcCCcEEEECCCcC--------C-C-------CCccCCH-HHHHHHHHHHHHhHhhcCCCeEEEEechh
Confidence 3445667777889999999987642 1 1 2222222 23445566666653 544 35555532
Q ss_pred CCCCCCCCCC---CcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEE
Q 025135 101 AIDHLDATDS---DPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFI 177 (257)
Q Consensus 101 ~~~~~~~~~~---~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi 177 (257)
. .-..+. +..+++++=++.++++| .|.|-+... ...+.++.|.+.+++|+.
T Consensus 155 ~---~~~~g~~~~~~~~~ai~Ra~ay~eAG------Ad~i~~e~~-----------------~~~~~~~~i~~~~~~P~n 208 (275)
T 2ze3_A 155 F---LKGHGATDEERLAETVRRGQAYADAG------ADGIFVPLA-----------------LQSQDIRALADALRVPLN 208 (275)
T ss_dssp T---TTTCSSSHHHHHHHHHHHHHHHHHTT------CSEEECTTC-----------------CCHHHHHHHHHHCSSCEE
T ss_pred h---hccccccchhhHHHHHHHHHHHHHCC------CCEEEECCC-----------------CCHHHHHHHHHhcCCCEE
Confidence 1 100000 13678888899999999 776654321 112456778888999976
Q ss_pred EeCC--C-CHHHHHHHHHcCCCcEEEechHHh
Q 025135 178 CSGG--F-TRELGIQALAEDGADLVAYGRLFI 206 (257)
Q Consensus 178 ~~G~--i-t~~~a~~~l~~g~~D~V~igR~~i 206 (257)
.+.+ . +. +++-+-| +..|.++-.++
T Consensus 209 ~~~~~~~~~~---~eL~~lG-v~~v~~~~~~~ 236 (275)
T 2ze3_A 209 VMAFPGSPVP---RALLDAG-AARVSFGQSLM 236 (275)
T ss_dssp EECCTTSCCH---HHHHHTT-CSEEECTTHHH
T ss_pred EecCCCCCCH---HHHHHcC-CcEEEEChHHH
Confidence 5532 3 54 3444445 99999987665
No 400
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=91.72 E-value=0.59 Score=39.34 Aligned_cols=79 Identities=14% Similarity=0.002 Sum_probs=57.8
Q ss_pred cHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEe-----CC---C-
Q 025135 112 PLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICS-----GG---F- 182 (257)
Q Consensus 112 ~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~-----G~---i- 182 (257)
+.....++++..++.| ...+.+.. ...++.+|+.+++||++. |+ +
T Consensus 34 ~~~~~~~~A~a~~~~G------a~~i~~~~--------------------~~~i~~ir~~v~~Pvig~~k~d~~~~~~~I 87 (232)
T 3igs_A 34 KPEIVAAMALAAEQAG------AVAVRIEG--------------------IDNLRMTRSLVSVPIIGIIKRDLDESPVRI 87 (232)
T ss_dssp SHHHHHHHHHHHHHTT------CSEEEEES--------------------HHHHHHHHTTCCSCEEEECBCCCSSCCCCB
T ss_pred CcchHHHHHHHHHHCC------CeEEEECC--------------------HHHHHHHHHhcCCCEEEEEeecCCCcceEe
Confidence 3567889999999999 66665421 245688999999998751 22 2
Q ss_pred C--HHHHHHHHHcCCCcEEEechHHhhCch----HHHHHHc
Q 025135 183 T--RELGIQALAEDGADLVAYGRLFISNPD----LVLRFKL 217 (257)
Q Consensus 183 t--~~~a~~~l~~g~~D~V~igR~~iadP~----l~~k~~~ 217 (257)
+ .++++++++.| +|+|.+.-....+|. +++++++
T Consensus 88 ~~~~~~i~~~~~~G-ad~V~l~~~~~~~p~~l~~~i~~~~~ 127 (232)
T 3igs_A 88 TPFLDDVDALAQAG-AAIIAVDGTARQRPVAVEALLARIHH 127 (232)
T ss_dssp SCSHHHHHHHHHHT-CSEEEEECCSSCCSSCHHHHHHHHHH
T ss_pred CccHHHHHHHHHcC-CCEEEECccccCCHHHHHHHHHHHHH
Confidence 3 46888999988 999999877766774 5556654
No 401
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=91.70 E-value=1.6 Score=39.56 Aligned_cols=133 Identities=12% Similarity=0.093 Sum_probs=66.2
Q ss_pred HHHHHHHHcCCCEEEecccccchhhhcCCCCc---CCcCCCCCCch---hhHhhHHHHHHHHHHHHhCCCeEEEEEccCC
Q 025135 29 QAALNAIQAGFDGIEIHGAHGYLIDQFLKDGI---NDRTDEYGGSI---ENRCRFLMQLVREVIVAIGADRVGVRMSPAI 102 (257)
Q Consensus 29 ~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~---N~R~D~yGGs~---enR~r~~~eiv~aiR~~vg~~~v~vrls~~~ 102 (257)
+.+..|++||+|+|.... |=...++||.. ... +.||-++ -+++.+..|-++.+++.+...-|.+=-+++
T Consensus 48 ~li~~Ak~aGAdavKfQ~---~k~~tl~s~~~~~fq~~-~~~~~~~ye~~~~~~l~~e~~~~L~~~~~~~Gi~~~stpf- 122 (385)
T 1vli_A 48 ALIDAAAEAGADAVKFQM---FQADRMYQKDPGLYKTA-AGKDVSIFSLVQSMEMPAEWILPLLDYCREKQVIFLSTVC- 122 (385)
T ss_dssp HHHHHHHHHTCSEEEECC---BCGGGGTSCCC----------CCCHHHHGGGBSSCGGGHHHHHHHHHHTTCEEECBCC-
T ss_pred HHHHHHHHhCCCEEeeee---eccCcccCcchhhhccC-CCCCccHHHHHHhcCCCHHHHHHHHHHHHHcCCcEEEccC-
Confidence 334456789999999754 33555556654 111 1232122 122223333344444333211111111222
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC
Q 025135 103 DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF 182 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i 182 (257)
+.+ -+..|++.+ ++++.|..+.. .+..+++.+.+ .+.|||+.-|+
T Consensus 123 ---------D~~----svd~l~~~~------vd~~KIgS~~~---------------~N~pLL~~va~-~gKPViLStGm 167 (385)
T 1vli_A 123 ---------DEG----SADLLQSTS------PSAFKIASYEI---------------NHLPLLKYVAR-LNRPMIFSTAG 167 (385)
T ss_dssp ---------SHH----HHHHHHTTC------CSCEEECGGGT---------------TCHHHHHHHHT-TCSCEEEECTT
T ss_pred ---------CHH----HHHHHHhcC------CCEEEECcccc---------------cCHHHHHHHHh-cCCeEEEECCC
Confidence 121 234567777 77777754321 12345555554 58999998887
Q ss_pred -CHHH---HHHHHHcCCC-cEEEe
Q 025135 183 -TREL---GIQALAEDGA-DLVAY 201 (257)
Q Consensus 183 -t~~~---a~~~l~~g~~-D~V~i 201 (257)
|.++ |.+.|.+.++ +++.+
T Consensus 168 aTl~Ei~~Ave~i~~~Gn~~iiLl 191 (385)
T 1vli_A 168 AEISDVHEAWRTIRAEGNNQIAIM 191 (385)
T ss_dssp CCHHHHHHHHHHHHTTTCCCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCCcEEEE
Confidence 7654 5566666656 65554
No 402
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=91.64 E-value=0.57 Score=44.37 Aligned_cols=70 Identities=19% Similarity=0.188 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhC-CcEEEeCCC-CHHHHHHHH
Q 025135 114 GLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQ-GTFICSGGF-TRELGIQAL 191 (257)
Q Consensus 114 ~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~G~i-t~~~a~~~l 191 (257)
++..+.++.|.++| +|+|.+....- ......+.++.||+.++ ++||+ |++ |.+.++.++
T Consensus 280 ~d~~eR~~aLv~AG------vD~iviD~ahG------------hs~~v~~~i~~ik~~~p~~~via-GNVaT~e~a~~Li 340 (556)
T 4af0_A 280 PGDKDRLKLLAEAG------LDVVVLDSSQG------------NSVYQIEFIKWIKQTYPKIDVIA-GNVVTREQAAQLI 340 (556)
T ss_dssp HHHHHHHHHHHHTT------CCEEEECCSCC------------CSHHHHHHHHHHHHHCTTSEEEE-EEECSHHHHHHHH
T ss_pred ccHHHHHHHHHhcC------CcEEEEecccc------------ccHHHHHHHHHHHhhCCcceEEe-ccccCHHHHHHHH
Confidence 34567888999999 78776643210 12234567788998875 45555 565 999999999
Q ss_pred HcCCCcEEEech
Q 025135 192 AEDGADLVAYGR 203 (257)
Q Consensus 192 ~~g~~D~V~igR 203 (257)
+.| +|.|-+|-
T Consensus 341 ~aG-AD~vkVGi 351 (556)
T 4af0_A 341 AAG-ADGLRIGM 351 (556)
T ss_dssp HHT-CSEEEECS
T ss_pred HcC-CCEEeecC
Confidence 998 99985443
No 403
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=91.57 E-value=5.5 Score=34.30 Aligned_cols=156 Identities=12% Similarity=-0.012 Sum_probs=88.7
Q ss_pred HHHHHHHHcCCCEEEecc-cccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCC
Q 025135 29 QAALNAIQAGFDGIEIHG-AHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDA 107 (257)
Q Consensus 29 ~AA~~a~~aGfDgVEIh~-a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~ 107 (257)
-.|+.+.++|||+|-+-+ +.+. .. -..|.-.=+++ -+...+++|.+.+.. ||.+.+-- +|.
T Consensus 27 ~sA~~~~~aG~~ai~vsg~s~a~---~~------G~pD~~~vt~~----em~~~~~~I~~~~~~-pviaD~d~--Gyg-- 88 (275)
T 2ze3_A 27 ASARLLEAAGFTAIGTTSAGIAH---AR------GRTDGQTLTRD----EMGREVEAIVRAVAI-PVNADIEA--GYG-- 88 (275)
T ss_dssp HHHHHHHHHTCSCEEECHHHHHH---HS------CCCSSSSSCHH----HHHHHHHHHHHHCSS-CEEEECTT--CSS--
T ss_pred HHHHHHHHcCCCEEEECcHHHHH---hC------CCCCCCCCCHH----HHHHHHHHHHhhcCC-CEEeecCC--CCC--
Confidence 467888899999999863 2321 11 11121111233 355566777777653 78877652 232
Q ss_pred CCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHH---hCCcEEEeCCC-C
Q 025135 108 TDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRS---YQGTFICSGGF-T 183 (257)
Q Consensus 108 ~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~---~~~pvi~~G~i-t 183 (257)
.+.+.+.+.++.+.++| +..|++...... .+. ...+.......++.++++ .++|+..+++- .
T Consensus 89 ---~~~~~~~~~v~~l~~aG------aagv~iED~~~~-~~k----~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda 154 (275)
T 2ze3_A 89 ---HAPEDVRRTVEHFAALG------VAGVNLEDATGL-TPT----ELYDLDSQLRRIEAARAAIDASGVPVFLNARTDT 154 (275)
T ss_dssp ---SSHHHHHHHHHHHHHTT------CSEEEEECBCSS-SSS----CBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCT
T ss_pred ---CCHHHHHHHHHHHHHcC------CcEEEECCCcCC-CCC----ccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechh
Confidence 34677888899999999 888998764321 110 011111222333334433 26787666664 2
Q ss_pred --------H----H----HHHHHHHcCCCcEEEechHHhhCchHHHHHHcCC
Q 025135 184 --------R----E----LGIQALAEDGADLVAYGRLFISNPDLVLRFKLNA 219 (257)
Q Consensus 184 --------~----~----~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~g~ 219 (257)
+ + .+..+.+.| +|.|.+=- +.+++..+++.+..
T Consensus 155 ~~~~~g~~~~~~~~~ai~Ra~ay~eAG-Ad~i~~e~--~~~~~~~~~i~~~~ 203 (275)
T 2ze3_A 155 FLKGHGATDEERLAETVRRGQAYADAG-ADGIFVPL--ALQSQDIRALADAL 203 (275)
T ss_dssp TTTTCSSSHHHHHHHHHHHHHHHHHTT-CSEEECTT--CCCHHHHHHHHHHC
T ss_pred hhccccccchhhHHHHHHHHHHHHHCC-CCEEEECC--CCCHHHHHHHHHhc
Confidence 1 1 233444455 99998843 46778888887654
No 404
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=91.49 E-value=0.61 Score=43.68 Aligned_cols=68 Identities=15% Similarity=0.060 Sum_probs=49.1
Q ss_pred HHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh-CCcEEEeCCCCHHHHHHHHHcC
Q 025135 116 GLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY-QGTFICSGGFTRELGIQALAED 194 (257)
Q Consensus 116 ~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~G~it~~~a~~~l~~g 194 (257)
..+.++.|.++| +|+|.+..... ......+.++.+++.+ ++||++....+++.|..+++.|
T Consensus 230 ~~~~a~~l~~aG------~d~I~id~a~g------------~~~~~~~~v~~i~~~~p~~~Vi~g~v~t~e~a~~l~~aG 291 (490)
T 4avf_A 230 TGERVAALVAAG------VDVVVVDTAHG------------HSKGVIERVRWVKQTFPDVQVIGGNIATAEAAKALAEAG 291 (490)
T ss_dssp HHHHHHHHHHTT------CSEEEEECSCC------------SBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTT
T ss_pred hHHHHHHHhhcc------cceEEecccCC------------cchhHHHHHHHHHHHCCCceEEEeeeCcHHHHHHHHHcC
Confidence 456678888899 88887753211 1234456788899988 5677773334999999999987
Q ss_pred CCcEEEec
Q 025135 195 GADLVAYG 202 (257)
Q Consensus 195 ~~D~V~ig 202 (257)
+|+|.+|
T Consensus 292 -aD~I~vg 298 (490)
T 4avf_A 292 -ADAVKVG 298 (490)
T ss_dssp -CSEEEEC
T ss_pred -CCEEEEC
Confidence 9999874
No 405
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=91.43 E-value=9.7 Score=36.02 Aligned_cols=139 Identities=12% Similarity=0.127 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAID 103 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~ 103 (257)
++.+++ ++.++|.|.|-|..+. |. .+-+.+.++.+|+. |. .+..-++....
T Consensus 119 ~~~~ve---~a~~aGvd~vrIf~s~--------sd----------------~~ni~~~i~~ak~~-G~-~v~~~i~~~~~ 169 (539)
T 1rqb_A 119 VDRFVD---KSAENGMDVFRVFDAM--------ND----------------PRNMAHAMAAVKKA-GK-HAQGTICYTIS 169 (539)
T ss_dssp HHHHHH---HHHHTTCCEEEECCTT--------CC----------------THHHHHHHHHHHHT-TC-EEEEEEECCCS
T ss_pred cHHHHH---HHHhCCCCEEEEEEeh--------hH----------------HHHHHHHHHHHHHC-CC-eEEEEEEeeeC
Confidence 444444 4567899999986554 11 13466778887764 33 33333443211
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh--CCcEEEeC-
Q 025135 104 HLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY--QGTFICSG- 180 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~G- 180 (257)
. ..+.+.+.++++.+.++| ++.|.+.... + ...+......++.+++.+ ++||-.=.
T Consensus 170 ---~--~~~~e~~~~~a~~l~~~G------ad~I~L~DT~----G------~~~P~~v~~lv~~l~~~~p~~i~I~~H~H 228 (539)
T 1rqb_A 170 ---P--VHTVEGYVKLAGQLLDMG------ADSIALKDMA----A------LLKPQPAYDIIKAIKDTYGQKTQINLHCH 228 (539)
T ss_dssp ---T--TCCHHHHHHHHHHHHHTT------CSEEEEEETT----C------CCCHHHHHHHHHHHHHHHCTTCCEEEEEB
T ss_pred ---C--CCCHHHHHHHHHHHHHcC------CCEEEeCCCC----C------CcCHHHHHHHHHHHHHhcCCCceEEEEeC
Confidence 1 135788999999999999 7777664321 1 112334456778899988 56654321
Q ss_pred ---CCCHHHHHHHHHcCCCcEEE-----echHHhhCchHHHH
Q 025135 181 ---GFTRELGIQALAEDGADLVA-----YGRLFISNPDLVLR 214 (257)
Q Consensus 181 ---~it~~~a~~~l~~g~~D~V~-----igR~~iadP~l~~k 214 (257)
|.-...+..+++.| ||.|- +|.. ..|+++-.-
T Consensus 229 nd~GlAvAN~laAveAG-a~~VD~ti~g~Ger-tGN~~lE~l 268 (539)
T 1rqb_A 229 STTGVTEVSLMKAIEAG-VDVVDTAISSMSLG-PGHNPTESV 268 (539)
T ss_dssp CTTSCHHHHHHHHHHTT-CSEEEEBCGGGCST-TSBCBHHHH
T ss_pred CCCChHHHHHHHHHHhC-CCEEEEeccccCCC-ccChhHHHH
Confidence 12256778899988 88775 3443 567876543
No 406
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=91.43 E-value=0.21 Score=42.40 Aligned_cols=47 Identities=17% Similarity=0.235 Sum_probs=36.8
Q ss_pred HHHHHHHhC-CcEEEeCCCCHH-----------HHHHHHHcCCCcEEEechHHhhCchHH
Q 025135 165 LRTWRRSYQ-GTFICSGGFTRE-----------LGIQALAEDGADLVAYGRLFISNPDLV 212 (257)
Q Consensus 165 ~~~ir~~~~-~pvi~~G~it~~-----------~a~~~l~~g~~D~V~igR~~iadP~l~ 212 (257)
++.+|+..+ .++++.||++++ ...++++.| +|++.+||+.+..+|..
T Consensus 173 i~~lr~~~~~~~i~v~gGI~~~g~~~~dq~rv~t~~~a~~aG-ad~iVvGr~I~~a~dp~ 231 (245)
T 1eix_A 173 AVRFKQVFGQEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAG-VDYMVIGRPVTQSVDPA 231 (245)
T ss_dssp HHHHHHHHCSSSEEEECCBCCTTCCCTTCCSCBCHHHHHHTT-CSEEEECHHHHTSSSHH
T ss_pred HHHHHHhcCCCCEEEECCcCCCCCCccchhccCCHHHHHHcC-CCEEEECHHHcCCCCHH
Confidence 345666664 568899999777 688888887 99999999999866643
No 407
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=91.04 E-value=0.9 Score=39.50 Aligned_cols=45 Identities=9% Similarity=-0.057 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCC
Q 025135 113 LGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGG 181 (257)
Q Consensus 113 ~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~ 181 (257)
.+.+++=++.++++| ++.|-+... + ...++.|.+.+++|+|+-|.
T Consensus 178 a~~~i~rA~a~~eAG------A~~ivlE~v---------------p---~~~a~~it~~l~iP~igIGa 222 (281)
T 1oy0_A 178 AEQTIADAIAVAEAG------AFAVVMEMV---------------P---AELATQITGKLTIPTVGIGA 222 (281)
T ss_dssp HHHHHHHHHHHHHHT------CSEEEEESC---------------C---HHHHHHHHHHCSSCEEEESS
T ss_pred HHHHHHHHHHHHHcC------CcEEEEecC---------------C---HHHHHHHHHhCCCCEEEeCC
Confidence 466777889999999 666654321 1 14567899999999887653
No 408
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=90.93 E-value=2.4 Score=38.12 Aligned_cols=39 Identities=10% Similarity=-0.107 Sum_probs=33.7
Q ss_pred HHHHHHHHHHhCCcEEEeCCCCHHHHHHHHHcCCCcEEEe
Q 025135 162 AQLLRTWRRSYQGTFICSGGFTRELGIQALAEDGADLVAY 201 (257)
Q Consensus 162 ~~~~~~ir~~~~~pvi~~G~it~~~a~~~l~~g~~D~V~i 201 (257)
+..++.+|+.+++||++-|-.++++|..+.+.| +|+|.+
T Consensus 218 ~~~i~~lr~~~~~PvivK~v~~~e~a~~a~~~G-ad~I~v 256 (368)
T 2nli_A 218 PRDIEEIAGHSGLPVFVKGIQHPEDADMAIKRG-ASGIWV 256 (368)
T ss_dssp HHHHHHHHHHSSSCEEEEEECSHHHHHHHHHTT-CSEEEE
T ss_pred HHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHcC-CCEEEE
Confidence 456888999999999887666999999999887 999988
No 409
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=90.87 E-value=5.4 Score=32.05 Aligned_cols=89 Identities=12% Similarity=0.017 Sum_probs=47.7
Q ss_pred HHHHHHHHHHhCCCeEE--EEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCC
Q 025135 79 MQLVREVIVAIGADRVG--VRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPG 156 (257)
Q Consensus 79 ~eiv~aiR~~vg~~~v~--vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~ 156 (257)
.++|+++|+..++.++. +++. +..+ .+++.+.++| +|++++|...
T Consensus 41 ~~~i~~l~~~~~~~~i~~~l~~~-----------di~~---~~~~~a~~~G------ad~v~vh~~~------------- 87 (207)
T 3ajx_A 41 LSVITAVKKAHPDKIVFADMKTM-----------DAGE---LEADIAFKAG------ADLVTVLGSA------------- 87 (207)
T ss_dssp THHHHHHHHHSTTSEEEEEEEEC-----------SCHH---HHHHHHHHTT------CSEEEEETTS-------------
T ss_pred HHHHHHHHHhCCCCeEEEEEEec-----------CccH---HHHHHHHhCC------CCEEEEeccC-------------
Confidence 46789999887444544 4543 1122 2456778899 9999887421
Q ss_pred CchhHHHHHHHHHHHhCCcEEE-eCCC-CHHH-HHHHHHcCCCcEEEec
Q 025135 157 TEDEEAQLLRTWRRSYQGTFIC-SGGF-TREL-GIQALAEDGADLVAYG 202 (257)
Q Consensus 157 ~~~~~~~~~~~ir~~~~~pvi~-~G~i-t~~~-a~~~l~~g~~D~V~ig 202 (257)
.........+.+++ .+.++.+ .-.. ++++ ++.+.+.| +|+|.+.
T Consensus 88 ~~~~~~~~~~~~~~-~g~~~gv~~~s~~~p~~~~~~~~~~g-~d~v~~~ 134 (207)
T 3ajx_A 88 DDSTIAGAVKAAQA-HNKGVVVDLIGIEDKATRAQEVRALG-AKFVEMH 134 (207)
T ss_dssp CHHHHHHHHHHHHH-HTCEEEEECTTCSSHHHHHHHHHHTT-CSEEEEE
T ss_pred ChHHHHHHHHHHHH-cCCceEEEEecCCChHHHHHHHHHhC-CCEEEEE
Confidence 11111122233333 3555422 2234 6666 44554545 9999553
No 410
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=90.81 E-value=0.42 Score=40.05 Aligned_cols=49 Identities=22% Similarity=0.443 Sum_probs=38.1
Q ss_pred HHHHHHHHHHh-CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCchHH
Q 025135 162 AQLLRTWRRSY-QGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNPDLV 212 (257)
Q Consensus 162 ~~~~~~ir~~~-~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP~l~ 212 (257)
..+++.++..+ ++|++.+||++++.+.+.++.| +.++..| .++..|+++
T Consensus 147 ~~~lkal~~p~p~i~~~ptGGI~~~N~~~~l~aG-a~~~vgG-s~l~~~~~i 196 (217)
T 3lab_A 147 AKLLKAWSGPFPDIQFCPTGGISKDNYKEYLGLP-NVICAGG-SWLTESKLL 196 (217)
T ss_dssp HHHHHHHHTTCTTCEEEEBSSCCTTTHHHHHHST-TBCCEEE-SGGGCHHHH
T ss_pred HHHHHHHHhhhcCceEEEeCCCCHHHHHHHHHCC-CEEEEEC-hhhcChhHH
Confidence 35677788777 4789999999999999999998 6666555 556666654
No 411
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=90.75 E-value=3.1 Score=37.29 Aligned_cols=40 Identities=13% Similarity=-0.044 Sum_probs=33.5
Q ss_pred HHHHHHHHHHhCCcEEEeCCCCHHHHHHHHHcCCCcEEEec
Q 025135 162 AQLLRTWRRSYQGTFICSGGFTRELGIQALAEDGADLVAYG 202 (257)
Q Consensus 162 ~~~~~~ir~~~~~pvi~~G~it~~~a~~~l~~g~~D~V~ig 202 (257)
+..++.+++.+++||++-+..++++++.+++.| +|+|.++
T Consensus 214 ~~~i~~l~~~~~~pv~vK~~~~~e~a~~a~~~G-ad~I~vs 253 (370)
T 1gox_A 214 WKDVAWLQTITSLPILVKGVITAEDARLAVQHG-AAGIIVS 253 (370)
T ss_dssp HHHHHHHHHHCCSCEEEECCCSHHHHHHHHHTT-CSEEEEC
T ss_pred HHHHHHHHHHhCCCEEEEecCCHHHHHHHHHcC-CCEEEEC
Confidence 355778999999999976666999999999987 9999884
No 412
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=90.74 E-value=2.9 Score=37.39 Aligned_cols=40 Identities=15% Similarity=0.015 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHhCCcEEEeCCCCHHHHHHHHHcCCCcEEEe
Q 025135 161 EAQLLRTWRRSYQGTFICSGGFTRELGIQALAEDGADLVAY 201 (257)
Q Consensus 161 ~~~~~~~ir~~~~~pvi~~G~it~~~a~~~l~~g~~D~V~i 201 (257)
.++.++.+++.+++||++-|-.++++|+.+++.| +|+|.+
T Consensus 205 ~w~~i~~lr~~~~~PvivK~v~~~e~A~~a~~~G-aD~I~v 244 (352)
T 3sgz_A 205 CWNDLSLLQSITRLPIILKGILTKEDAELAMKHN-VQGIVV 244 (352)
T ss_dssp CHHHHHHHHHHCCSCEEEEEECSHHHHHHHHHTT-CSEEEE
T ss_pred CHHHHHHHHHhcCCCEEEEecCcHHHHHHHHHcC-CCEEEE
Confidence 3466888999999999887767999999999988 999987
No 413
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=90.72 E-value=7.5 Score=33.51 Aligned_cols=105 Identities=10% Similarity=-0.051 Sum_probs=65.2
Q ss_pred CCCCChhhHHHHHHH----------HHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHH
Q 025135 12 PQALQTSEIPEVIDQ----------YRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQL 81 (257)
Q Consensus 12 p~~lt~~eI~~ii~~----------f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~ei 81 (257)
.+.+|..++.+..+. =.-.|+.+.++|||.| +-+.. +-.-.+ -..|.-.=+ +.-++..
T Consensus 13 ~~~~t~~~lr~~~~~g~~i~m~tayDa~sA~l~e~aG~d~i-lvGdS--l~~~~l-----G~~dt~~vt----ldem~~h 80 (275)
T 3vav_A 13 RPAVTVPKLQAMREAGEKIAMLTCYDASFAALLDRANVDVQ-LIGDS--LGNVLQ-----GQTTTLPVT----LDDIAYH 80 (275)
T ss_dssp CCCCCHHHHHHHHHHTCCEEEEECCSHHHHHHHHHTTCSEE-EECTT--HHHHTT-----CCSSSTTCC----HHHHHHH
T ss_pred cCCcCHHHHHHHHHCCCcEEEEeCcCHHHHHHHHHcCCCEE-EECcH--HHHHHc-----CCCCCCccC----HHHHHHH
Confidence 466899999888775 2567888999999999 44321 111111 011111112 2345566
Q ss_pred HHHHHHHhCCCeEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeC
Q 025135 82 VREVIVAIGADRVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQ 141 (257)
Q Consensus 82 v~aiR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~ 141 (257)
+++|++.++.-+|.+.+.- ..| .+.+++.+-+.+|.+.| ++.|++..
T Consensus 81 ~~aV~r~~~~~~vvaD~pf-gsY------~s~~~a~~~a~rl~kaG------a~aVklEd 127 (275)
T 3vav_A 81 TACVARAQPRALIVADLPF-GTY------GTPADAFASAVKLMRAG------AQMVKFEG 127 (275)
T ss_dssp HHHHHHTCCSSEEEEECCT-TSC------SSHHHHHHHHHHHHHTT------CSEEEEEC
T ss_pred HHHHHhcCCCCCEEEecCC-CCC------CCHHHHHHHHHHHHHcC------CCEEEECC
Confidence 7777777754467777652 123 24677777788888889 88888865
No 414
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=90.66 E-value=3.6 Score=35.63 Aligned_cols=142 Identities=15% Similarity=0.085 Sum_probs=82.1
Q ss_pred HHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCCC
Q 025135 30 AALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDATD 109 (257)
Q Consensus 30 AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~ 109 (257)
.+++|.++|.|.|-|-.+.- +. ++....+.+.+.-.+.+.++++.+|+. |. .+.+-++..-...+. .
T Consensus 85 ~i~~a~~ag~~~v~i~~~~s--------d~--~~~~~~~~~~~e~l~~~~~~i~~a~~~-G~-~v~~~l~~~~~~~~~-~ 151 (298)
T 2cw6_A 85 GFEAAVAAGAKEVVIFGAAS--------EL--FTKKNINCSIEESFQRFDAILKAAQSA-NI-SVRGYVSCALGCPYE-G 151 (298)
T ss_dssp HHHHHHHTTCSEEEEEEESC--------HH--HHHHHHSCCHHHHHHHHHHHHHHHHHT-TC-EEEEEEETTTCBTTT-B
T ss_pred hHHHHHHCCCCEEEEEecCC--------HH--HHHHHhCCCHHHHHHHHHHHHHHHHHC-CC-eEEEEEEEEeeCCcC-C
Confidence 46678889999998865531 11 122223445565566777777777764 33 333333311000111 1
Q ss_pred CCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhC-CcEEEeCC--C--CH
Q 025135 110 SDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQ-GTFICSGG--F--TR 184 (257)
Q Consensus 110 ~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~G~--i--t~ 184 (257)
..+.+...++++.+.++| ++.|.+... .+ ...+......++.+++.++ +|+-.=+. . -.
T Consensus 152 ~~~~~~~~~~~~~~~~~G------a~~i~l~DT----~G------~~~P~~~~~lv~~l~~~~~~~~i~~H~Hn~~Gla~ 215 (298)
T 2cw6_A 152 KISPAKVAEVTKKFYSMG------CYEISLGDT----IG------VGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQAL 215 (298)
T ss_dssp SCCHHHHHHHHHHHHHTT------CSEEEEEET----TS------CCCHHHHHHHHHHHHHHSCGGGEEEEEBCTTSCHH
T ss_pred CCCHHHHHHHHHHHHHcC------CCEEEecCC----CC------CcCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHH
Confidence 235788899999999999 777776532 11 1123344567788888884 56533221 1 25
Q ss_pred HHHHHHHHcCCCcEEEe
Q 025135 185 ELGIQALAEDGADLVAY 201 (257)
Q Consensus 185 ~~a~~~l~~g~~D~V~i 201 (257)
..+..+++.| ++.|-.
T Consensus 216 An~laA~~aG-a~~vd~ 231 (298)
T 2cw6_A 216 ANTLMALQMG-VSVVDS 231 (298)
T ss_dssp HHHHHHHHTT-CCEEEE
T ss_pred HHHHHHHHhC-CCEEEe
Confidence 5677889988 787743
No 415
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=90.63 E-value=5.7 Score=31.98 Aligned_cols=106 Identities=10% Similarity=-0.095 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHhCCCeEEE--EEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCC
Q 025135 77 FLMQLVREVIVAIGADRVGV--RMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGR 154 (257)
Q Consensus 77 ~~~eiv~aiR~~vg~~~v~v--rls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~ 154 (257)
+-.++|+++|+...+.+|.+ ++. +..+ .+++.+.++| +|++.++...
T Consensus 39 ~g~~~i~~ir~~~~~~~i~~~~~~~-----------~~~~---~~~~~~~~~G------ad~v~v~~~~----------- 87 (211)
T 3f4w_A 39 EGVNAIKAIKEKYPHKEVLADAKIM-----------DGGH---FESQLLFDAG------ADYVTVLGVT----------- 87 (211)
T ss_dssp HTTHHHHHHHHHCTTSEEEEEEEEC-----------SCHH---HHHHHHHHTT------CSEEEEETTS-----------
T ss_pred ccHHHHHHHHHhCCCCEEEEEEEec-----------cchH---HHHHHHHhcC------CCEEEEeCCC-----------
Confidence 44688999998854446543 332 1222 3578888999 8999886421
Q ss_pred CCCchhHHHHHHHHHHHhCCcEEEe-CCC-CH-HHHHHHHHcCCCcEEEechHHh------hCchHHHHHHc
Q 025135 155 PGTEDEEAQLLRTWRRSYQGTFICS-GGF-TR-ELGIQALAEDGADLVAYGRLFI------SNPDLVLRFKL 217 (257)
Q Consensus 155 ~~~~~~~~~~~~~ir~~~~~pvi~~-G~i-t~-~~a~~~l~~g~~D~V~igR~~i------adP~l~~k~~~ 217 (257)
.........+.+++ .+.+++.. -.. |+ +.++.+++.| +|+|.+..++- ..++.++++++
T Consensus 88 --~~~~~~~~~~~~~~-~g~~~~v~~~~~~t~~~~~~~~~~~g-~d~i~v~~g~~g~~~~~~~~~~i~~l~~ 155 (211)
T 3f4w_A 88 --DVLTIQSCIRAAKE-AGKQVVVDMICVDDLPARVRLLEEAG-ADMLAVHTGTDQQAAGRKPIDDLITMLK 155 (211)
T ss_dssp --CHHHHHHHHHHHHH-HTCEEEEECTTCSSHHHHHHHHHHHT-CCEEEEECCHHHHHTTCCSHHHHHHHHH
T ss_pred --ChhHHHHHHHHHHH-cCCeEEEEecCCCCHHHHHHHHHHcC-CCEEEEcCCCcccccCCCCHHHHHHHHH
Confidence 11111233344444 46665531 223 55 5678888887 99998754322 24567777764
No 416
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=90.62 E-value=0.6 Score=42.66 Aligned_cols=67 Identities=13% Similarity=0.112 Sum_probs=47.6
Q ss_pred HHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCCCHHHHHHHHHcCCC
Q 025135 117 LAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGFTRELGIQALAEDGA 196 (257)
Q Consensus 117 ~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~it~~~a~~~l~~g~~ 196 (257)
.+.++.|.++| +++|.+... . + ......+.++.+++.+++||++.+-.|+++|+.+++.| +
T Consensus 146 ~e~~~~lveaG------vdvIvldta-~---G--------~~~~~~e~I~~ik~~~~i~Vi~g~V~t~e~A~~a~~aG-A 206 (400)
T 3ffs_A 146 IERAKLLVEAG------VDVIVLDSA-H---G--------HSLNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIENG-A 206 (400)
T ss_dssp CHHHHHHHHHT------CSEEEECCS-C---C--------SBHHHHHHHHHHHTTCCCEEEEEEECSHHHHHHHHHTT-C
T ss_pred HHHHHHHHHcC------CCEEEEeCC-C---C--------CcccHHHHHHHHHhcCCCeEEEeecCCHHHHHHHHHcC-C
Confidence 45678888999 888865321 0 0 12233567778888888888863334899999999987 9
Q ss_pred cEEEec
Q 025135 197 DLVAYG 202 (257)
Q Consensus 197 D~V~ig 202 (257)
|+|.+|
T Consensus 207 D~I~vG 212 (400)
T 3ffs_A 207 DGIKVG 212 (400)
T ss_dssp SEEEEC
T ss_pred CEEEEe
Confidence 999985
No 417
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=90.61 E-value=0.87 Score=42.70 Aligned_cols=67 Identities=16% Similarity=0.121 Sum_probs=49.0
Q ss_pred HHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh-CCcEEEeCCCCHHHHHHHHHcCC
Q 025135 117 LAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY-QGTFICSGGFTRELGIQALAEDG 195 (257)
Q Consensus 117 ~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~G~it~~~a~~~l~~g~ 195 (257)
.+.++.|.++| ++.|++..... ......+.++.+++.+ ++||++.+..+++.+..+++.|
T Consensus 233 ~~~a~~l~~aG------~d~I~id~a~g------------~~~~~~~~i~~ir~~~p~~~Vi~g~v~t~e~a~~l~~aG- 293 (496)
T 4fxs_A 233 EERVKALVEAG------VDVLLIDSSHG------------HSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAG- 293 (496)
T ss_dssp HHHHHHHHHTT------CSEEEEECSCT------------TSHHHHHHHHHHHHHCTTCCEEEEEECSHHHHHHHHHHT-
T ss_pred HHHHHHHHhcc------CceEEeccccc------------cchHHHHHHHHHHHHCCCceEEEcccCcHHHHHHHHHhC-
Confidence 45677888899 88888764210 1233456788899988 6788774344999999999998
Q ss_pred CcEEEec
Q 025135 196 ADLVAYG 202 (257)
Q Consensus 196 ~D~V~ig 202 (257)
+|+|.++
T Consensus 294 aD~I~Vg 300 (496)
T 4fxs_A 294 VSAVKVG 300 (496)
T ss_dssp CSEEEEC
T ss_pred CCEEEEC
Confidence 9999875
No 418
>3no5_A Uncharacterized protein; PFAM DUF849 domain containing protein, structural genomics, center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha}
Probab=90.57 E-value=0.44 Score=41.34 Aligned_cols=50 Identities=12% Similarity=0.164 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGA 91 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~ 91 (257)
.++.++.|..|.+||+..|-|| .|.++ | ..-.+.....|++++||+++++
T Consensus 29 peEia~~A~~~~~AGAaivHlH----------------vRd~~-G-~~s~d~~~~~e~~~~IR~~~pd 78 (275)
T 3no5_A 29 VSEQVESTQAAFEAGATLVHLH----------------VRNDD-E-TPTSNPDRFALVLEGIRKHAPG 78 (275)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEC----------------EECTT-S-CEECCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHccCcEEEEe----------------ecCCC-C-CcCCCHHHHHHHHHHHHHhCCC
Confidence 4445788999999999999998 46666 4 3334577899999999999843
No 419
>4gfi_A Mandelate racemase/muconate lactonizing enzyme FA protein; putative L-Ala-L/D-Glu epimerase; HET: GLU; 1.90A {Agrobacterium tumefaciens}
Probab=90.31 E-value=0.44 Score=42.01 Aligned_cols=105 Identities=15% Similarity=0.052 Sum_probs=62.1
Q ss_pred HHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCCCCCCCCCCc
Q 025135 34 AIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAIDHLDATDSDP 112 (257)
Q Consensus 34 a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~~~~~~~~~~ 112 (257)
+...||..+.|..+. ..| .+.++++|+. +++ .|.+..|. .| +
T Consensus 141 ~~~~~~~~~Kik~g~--------------~~d-------------~~~v~~vr~~-g~d~~l~vDaN~--~w-------~ 183 (329)
T 4gfi_A 141 AENAGRPLLKIKTGT--------------ADD-------------EARLRAVRAA-APEARIIIDANE--GW-------N 183 (329)
T ss_dssp HHTTTSSEEEEECCS--------------SCC-------------HHHHHHHHHH-CTTSEEEEECTT--CC-------C
T ss_pred HhhccccEEEecCCc--------------ccH-------------HHHHHHHHHh-ccCCeEEEEcCC--CC-------C
Confidence 346789999987653 111 3567777865 655 45544442 22 4
Q ss_pred HHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHH
Q 025135 113 LGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQAL 191 (257)
Q Consensus 113 ~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l 191 (257)
.+++.++++.|++.+ +.|++ +|-.... . . ..++...++||.+...+ +.+++...+
T Consensus 184 ~~~A~~~~~~l~~~~------i~~iE--qP~~~~~------------~--~--~~~~~~~~ipia~dEs~~~~~d~~~~~ 239 (329)
T 4gfi_A 184 DDNIEYYLKLAAELK------ISLIE--QPLPAGK------------D--A--MLARIEHPVLICADESVHSTEDLAGLR 239 (329)
T ss_dssp TTTHHHHHHHHHHTT------CCEEE--CCSCTTS------------C--G--GGGGSCCSSEEEESTTCCTGGGSGGGT
T ss_pred HHHHHHHHHhhhhcC------ceEEE--ecCCCcc------------H--H--HHHHhcCCCCchhccCCCCHHHHHHHh
Confidence 567899999999999 88987 5521100 0 0 01233445677666666 666655432
Q ss_pred HcCCCcEEEe
Q 025135 192 AEDGADLVAY 201 (257)
Q Consensus 192 ~~g~~D~V~i 201 (257)
+.+|+|.+
T Consensus 240 --~a~d~i~~ 247 (329)
T 4gfi_A 240 --DRYDAINI 247 (329)
T ss_dssp --TTCSEEEE
T ss_pred --hccCeEEe
Confidence 44676654
No 420
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=90.20 E-value=2.1 Score=38.37 Aligned_cols=132 Identities=12% Similarity=0.141 Sum_probs=68.0
Q ss_pred HHHHHHHHHcCCCEEEecccccchhhhcCCCCc---CCcCCCCCC-c---hhhHhhHHHHHHHHHHHHhCCCeEEEEEcc
Q 025135 28 RQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGI---NDRTDEYGG-S---IENRCRFLMQLVREVIVAIGADRVGVRMSP 100 (257)
Q Consensus 28 ~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~---N~R~D~yGG-s---~enR~r~~~eiv~aiR~~vg~~~v~vrls~ 100 (257)
.+.+..|++||.|+|.... |=...++||.. ..++ +| + +-++..+..|-++.+++.+...-|.+=-++
T Consensus 38 ~~li~~ak~aGadavKfq~---~k~~tl~s~~~~~fq~~~---~~~~~y~~~~~~~l~~e~~~~L~~~~~~~Gi~~~st~ 111 (349)
T 2wqp_A 38 FEMVDAAYNAGAEVVKHQT---HIVEDEMSDEAKQVIPGN---ADVSIYEIMERCALNEEDEIKLKEYVESKGMIFISTL 111 (349)
T ss_dssp HHHHHHHHHHTCSEEEEEE---CCHHHHCCGGGGGCCCTT---CSSCHHHHHHHHCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHhCCCEEeeee---cccccccCcchhccccCC---CCccHHHHHHHhCCCHHHHHHHHHHHHHhCCeEEEee
Confidence 3444566789999999753 23444444433 1111 13 2 233344444444554444422112221223
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeC
Q 025135 101 AIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSG 180 (257)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G 180 (257)
+ +.+ -++.|++.+ ++.+.|..+.. .+..+++.+.+ .+.|||+.-
T Consensus 112 ~----------d~~----svd~l~~~~------v~~~KI~S~~~---------------~n~~LL~~va~-~gkPviLst 155 (349)
T 2wqp_A 112 F----------SRA----AALRLQRMD------IPAYKIGSGEC---------------NNYPLIKLVAS-FGKPIILST 155 (349)
T ss_dssp C----------SHH----HHHHHHHHT------CSCEEECGGGT---------------TCHHHHHHHHT-TCSCEEEEC
T ss_pred C----------CHH----HHHHHHhcC------CCEEEECcccc---------------cCHHHHHHHHh-cCCeEEEEC
Confidence 2 122 234466777 77777754322 12345555554 589999988
Q ss_pred CC-CHHH---HHHHHHcCCCcEEEe
Q 025135 181 GF-TREL---GIQALAEDGADLVAY 201 (257)
Q Consensus 181 ~i-t~~~---a~~~l~~g~~D~V~i 201 (257)
|+ |.++ |.+.|.+.+++++.+
T Consensus 156 Gmat~~Ei~~Ave~i~~~G~~iiLl 180 (349)
T 2wqp_A 156 GMNSIESIKKSVEIIREAGVPYALL 180 (349)
T ss_dssp TTCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 87 7655 445555444577665
No 421
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=90.20 E-value=3.5 Score=37.82 Aligned_cols=149 Identities=10% Similarity=0.031 Sum_probs=81.7
Q ss_pred HHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhH--HHHHHHHHHHHhC---CCeEEEEEccC--
Q 025135 29 QAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRF--LMQLVREVIVAIG---ADRVGVRMSPA-- 101 (257)
Q Consensus 29 ~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~--~~eiv~aiR~~vg---~~~v~vrls~~-- 101 (257)
+..+.|.++||+-|-|-++|+.. -.| -.++..... +.++++...+.+. ...|+.=....
T Consensus 108 e~i~~aI~aGFtSVMiD~S~~~~-------~~~-------~pl~eNi~~~rt~elv~~Ah~~~~~~~eaElG~vgG~Ev~ 173 (420)
T 2fiq_A 108 ELVKAYVRAGFSKIHLDASMSCA-------GDP-------IPLAPETVAERAAVLCFAAESVATDCQREQLSYVIGTEVP 173 (420)
T ss_dssp HHHHHHHHTTCCEEEECCCSCCB-------TCC-------SSCCHHHHHHHHHHHHHHHHHHCCHHHHHHCEEEEECSSC
T ss_pred HHHHHHHHhCCCEEEECCCCCCC-------CCC-------CCccHHHHHHHHHHHHHHHHHHcccCCcccceEEeeeecC
Confidence 44566789999999999887210 011 012333323 5777777776521 11232222211
Q ss_pred --CCC-CCCC--CCCcHHHHHHHHH----HHHhcCCccCCceeE-------EEeeCCCcccCCCcCCCCCCCchhHHHHH
Q 025135 102 --IDH-LDAT--DSDPLGLGLAVIQ----GLNKLQIDQGAKLTY-------LHVTQPRYTAYGQTESGRPGTEDEEAQLL 165 (257)
Q Consensus 102 --~~~-~~~~--~~~~~~~~~~l~~----~L~~~G~~~~~~vd~-------i~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (257)
++- .+.. ...+.+++.++++ .|.+.| +|. +.+..+....... ......+.+
T Consensus 174 v~~~~~~~~~~~~~T~PeeA~~Fve~~~~~~~~tG------vd~~~~~vi~LAV~iGt~HG~y~-------~~~ld~e~l 240 (420)
T 2fiq_A 174 VPGGEASAIQSVHITHVEDAANTLRTHQKAFIARG------LTEALTRVIAIVVQPGVEFDHSN-------IIHYQPQEA 240 (420)
T ss_dssp C----------CCCCCHHHHHHHHHHHHHHHHTTT------CHHHHHTEEEEECCCSCEECSSC-------EECCCGGGG
T ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHHHhhC------CCcccccceEEEEeCCccCCCCC-------CCCcCHHHH
Confidence 000 0011 1245788888887 777888 666 6554443322210 111122456
Q ss_pred HHHHHHhCCc-EEE---eCC-CCHHHHHHHHHcCCCcEEEechHH
Q 025135 166 RTWRRSYQGT-FIC---SGG-FTRELGIQALAEDGADLVAYGRLF 205 (257)
Q Consensus 166 ~~ir~~~~~p-vi~---~G~-it~~~a~~~l~~g~~D~V~igR~~ 205 (257)
+.|++.+++| ++. +|. ++.++..++++.| +--|=+|..+
T Consensus 241 ~~I~~~v~~P~LVle~HGgSg~~~e~l~~~v~~G-i~kiNV~t~l 284 (420)
T 2fiq_A 241 QALAQWIENTRMVYEAHSTDYQTRTAYWELVRDH-FAILKVGPAL 284 (420)
T ss_dssp HHHHHHHTTSSCEEEESCCTTCCHHHHHHHHHTT-EEEEEECHHH
T ss_pred HHHHHhcCCCCEEEecCCCCCCCHHHHHHHHHcC-CCEEEECHHH
Confidence 7889999999 666 333 3788889999988 5566666544
No 422
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=90.17 E-value=5.1 Score=36.74 Aligned_cols=136 Identities=18% Similarity=0.173 Sum_probs=73.9
Q ss_pred HHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCCC
Q 025135 30 AALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDATD 109 (257)
Q Consensus 30 AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~ 109 (257)
.+++|.++|.|.|-|-.+. |+. ++.-..+-+.+.=.+.+.++++.+|+. | +-|+++..+.+.
T Consensus 115 di~~A~~aG~~~V~i~~s~--------Sd~--~~~~~l~~s~~e~l~~~~~~v~~ak~~-G---~~V~~~~eda~r---- 176 (423)
T 3ivs_A 115 DARVAVETGVDGVDVVIGT--------SQY--LRKYSHGKDMTYIIDSATEVINFVKSK-G---IEVRFSSEDSFR---- 176 (423)
T ss_dssp HHHHHHHTTCSEEEEEEEC-----------------------CHHHHHHHHHHHHHHTT-T---CEEEEEEESGGG----
T ss_pred hHHHHHHcCCCEEEEEeec--------cHH--HHHHHcCCCHHHHHHHHHHHHHHHHHC-C---CEEEEEEccCcC----
Confidence 3567788999988876544 121 222233433333344455555555543 2 334555432221
Q ss_pred CCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-C----H
Q 025135 110 SDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-T----R 184 (257)
Q Consensus 110 ~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t----~ 184 (257)
.+.+...++++.+.++| ++.|.+.... + ...+......++.+++.+++||-. ... | .
T Consensus 177 -~d~~~~~~v~~~~~~~G------a~~i~l~DTv----G------~~~P~~v~~lv~~l~~~~~~~i~~-H~Hnd~GlAv 238 (423)
T 3ivs_A 177 -SDLVDLLSLYKAVDKIG------VNRVGIADTV----G------CATPRQVYDLIRTLRGVVSCDIEC-HFHNDTGMAI 238 (423)
T ss_dssp -SCHHHHHHHHHHHHHHC------CSEEEEEETT----S------CCCHHHHHHHHHHHHHHCSSEEEE-EEBCTTSCHH
T ss_pred -CCHHHHHHHHHHHHHhC------CCccccCCcc----C------cCCHHHHHHHHHHHHhhcCCeEEE-EECCCCchHH
Confidence 35677889999999999 6767654321 1 112333445667788887766433 222 2 5
Q ss_pred HHHHHHHHcCCCcEEEec
Q 025135 185 ELGIQALAEDGADLVAYG 202 (257)
Q Consensus 185 ~~a~~~l~~g~~D~V~ig 202 (257)
..+..+++.| +|.|-..
T Consensus 239 AN~laAv~aG-a~~vd~t 255 (423)
T 3ivs_A 239 ANAYCALEAG-ATHIDTS 255 (423)
T ss_dssp HHHHHHHHTT-CCEEEEB
T ss_pred HHHHHHHHhC-CCEEEEe
Confidence 6677888887 7777443
No 423
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=89.89 E-value=9.5 Score=33.39 Aligned_cols=130 Identities=15% Similarity=0.098 Sum_probs=76.2
Q ss_pred CCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEc---cCCCC-CCC----CC
Q 025135 38 GFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMS---PAIDH-LDA----TD 109 (257)
Q Consensus 38 GfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls---~~~~~-~~~----~~ 109 (257)
||+-|=|-++|- +++...+...++++..++. |- .|-.-|. ..++- .+. ..
T Consensus 113 GFtSVMiDgS~~--------------------p~eENi~~Tk~vv~~ah~~-gv-sVEaElG~igG~Edgv~~~~~~~~~ 170 (306)
T 3pm6_A 113 GFDSIMVDMSHF--------------------SKEENLRLTRELVAYCNAR-GI-ATEAEPGRIEGGEDGVQDTVDLEGV 170 (306)
T ss_dssp CCSEEEECCTTS--------------------CHHHHHHHHHHHHHHHHTT-TC-EEEECSSBCCCCBTTBCCCTTCCCB
T ss_pred CCCEEEEeCCCC--------------------CHHHHHHHHHHHHHHHHHc-CC-eEEEEeeeeccccCCcccccccccc
Confidence 777777776661 3677789999999988753 21 2222222 11111 100 11
Q ss_pred CCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh--CCcEEEeCCC--CHH
Q 025135 110 SDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY--QGTFICSGGF--TRE 185 (257)
Q Consensus 110 ~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~G~i--t~~ 185 (257)
..+.+++.+|+ +.| +|+|.+.-+...+.+. .+. .....+.+++|++.+ ++|++.=|+- ..+
T Consensus 171 yT~Peea~~Fv----~Tg------vD~LAvaiGt~HG~Yk--~~~---p~Ld~~~L~~I~~~v~~~vpLVlHGgSG~p~e 235 (306)
T 3pm6_A 171 LTTPEESEEFV----ATG------INWLAPAFGNVHGNYG--PRG---VQLDYERLQRINEAVGERVGLVLHGADPFTKE 235 (306)
T ss_dssp CCCHHHHHHHH----TTT------CSEECCCSSCCSSCCC--TTC---CCCCHHHHHHHHHHHTTTSEEEECSCTTCCHH
T ss_pred CCCHHHHHHHH----HcC------CCEEEEEcCccccCcC--CCC---CccCHHHHHHHHHHhCCCCCEEeeCCCCCCHH
Confidence 23467776665 478 8888766554443221 011 112346678899988 6897776654 678
Q ss_pred HHHHHHHcCCCcEEEechHH
Q 025135 186 LGIQALAEDGADLVAYGRLF 205 (257)
Q Consensus 186 ~a~~~l~~g~~D~V~igR~~ 205 (257)
+..+++..| +-=|=++.-+
T Consensus 236 ~i~~ai~~G-V~KiNi~Tdl 254 (306)
T 3pm6_A 236 IFEKCIERG-VAKVNVNRAV 254 (306)
T ss_dssp HHHHHHHTT-EEEEEESHHH
T ss_pred HHHHHHHcC-CeEEEeChHH
Confidence 899999988 4444455443
No 424
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=89.81 E-value=3.2 Score=34.49 Aligned_cols=127 Identities=9% Similarity=-0.025 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhh-----------HhhHHHHHHHHHHHHhCCCe
Q 025135 25 DQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIEN-----------RCRFLMQLVREVIVAIGADR 93 (257)
Q Consensus 25 ~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~en-----------R~r~~~eiv~aiR~~vg~~~ 93 (257)
+.+.+.|+.+.++ +|.|||..-. +.- -.-|.+.. +..+..+++++||+.+.. +
T Consensus 19 ~~~~~~a~~~~~~-ad~iel~~p~-----------sdp---~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~~~-p 82 (248)
T 1geq_A 19 QSTLNFLLALDEY-AGAIELGIPF-----------SDP---IADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSST-P 82 (248)
T ss_dssp HHHHHHHHHHGGG-BSCEEEECCC-----------SCC---TTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCCC-C
T ss_pred HHHHHHHHHHHHc-CCEEEECCCC-----------CCC---CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCCC-C
Confidence 5667777778888 9999987321 110 01121111 345678999999998743 5
Q ss_pred EEEEE--ccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHH
Q 025135 94 VGVRM--SPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRS 171 (257)
Q Consensus 94 v~vrl--s~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~ 171 (257)
|.+-. ++. | .....+.++.+.++| +++++++.-. ........+.+++
T Consensus 83 v~~~~~~~~~--~--------~~~~~~~~~~~~~~G------ad~v~~~~~~--------------~~~~~~~~~~~~~- 131 (248)
T 1geq_A 83 IVLMTYYNPI--Y--------RAGVRNFLAEAKASG------VDGILVVDLP--------------VFHAKEFTEIARE- 131 (248)
T ss_dssp EEEEECHHHH--H--------HHCHHHHHHHHHHHT------CCEEEETTCC--------------GGGHHHHHHHHHH-
T ss_pred EEEEeccchh--h--------hcCHHHHHHHHHHCC------CCEEEECCCC--------------hhhHHHHHHHHHH-
Confidence 54422 210 0 001135677888899 8999985311 1111233334443
Q ss_pred hCCc-EEEeCCCCHHHHHHHHHcCCCc-EE
Q 025135 172 YQGT-FICSGGFTRELGIQALAEDGAD-LV 199 (257)
Q Consensus 172 ~~~p-vi~~G~it~~~a~~~l~~g~~D-~V 199 (257)
.+.. +++....|+.+..+.+.++ +| +|
T Consensus 132 ~g~~~~~~i~~~t~~e~~~~~~~~-~d~~i 160 (248)
T 1geq_A 132 EGIKTVFLAAPNTPDERLKVIDDM-TTGFV 160 (248)
T ss_dssp HTCEEEEEECTTCCHHHHHHHHHH-CSSEE
T ss_pred hCCCeEEEECCCCHHHHHHHHHhc-CCCeE
Confidence 4554 3333333666665555555 56 54
No 425
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=89.75 E-value=16 Score=35.77 Aligned_cols=138 Identities=16% Similarity=0.087 Sum_probs=82.3
Q ss_pred HHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCC-CCCC
Q 025135 33 NAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDA-TDSD 111 (257)
Q Consensus 33 ~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~-~~~~ 111 (257)
+|.++|.|.|-|..++ | .++-+...++.+++. |. .+.+-++...++.+. ....
T Consensus 205 ~a~~~Gvd~irIf~s~------------n------------~l~~l~~~i~~ak~~-G~-~v~~~i~~~~d~~dp~r~~~ 258 (718)
T 3bg3_A 205 VAKENGMDVFRVFDSL------------N------------YLPNMLLGMEAAGSA-GG-VVEAAISYTGDVADPSRTKY 258 (718)
T ss_dssp HHHHHTCCEEEEECSS------------C------------CHHHHHHHHHHHHTT-TS-EEEEEEECCSCTTCTTCCTT
T ss_pred HHHhcCcCEEEEEecH------------H------------HHHHHHHHHHHHHHc-CC-eEEEEEEeeccccCCCCCCC
Confidence 4557899999987644 1 134566677777753 33 333333322222221 1123
Q ss_pred cHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh-CCcEEEeCCCC----HHH
Q 025135 112 PLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY-QGTFICSGGFT----REL 186 (257)
Q Consensus 112 ~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~G~it----~~~ 186 (257)
+.+...++++.+.++| ++.|.+.... + ...+......++.+++.+ ++||-.=..-| ...
T Consensus 259 ~~e~~~~~a~~l~~~G------a~~I~l~DT~----G------~~~P~~v~~lV~~lk~~~p~~~I~~H~Hnd~GlAvAN 322 (718)
T 3bg3_A 259 SLQYYMGLAEELVRAG------THILCIKDMA----G------LLKPTACTMLVSSLRDRFPDLPLHIHTHDTSGAGVAA 322 (718)
T ss_dssp CHHHHHHHHHHHHHHT------CSEEEEECTT----S------CCCHHHHHHHHHHHHHHSTTCCEEEECCCTTSCHHHH
T ss_pred CHHHHHHHHHHHHHcC------CCEEEEcCcC----C------CcCHHHHHHHHHHHHHhCCCCeEEEEECCCccHHHHH
Confidence 5788999999999999 7777765421 1 112334456778899988 56654322213 566
Q ss_pred HHHHHHcCCCcEEEechHH----hhCchHHH
Q 025135 187 GIQALAEDGADLVAYGRLF----ISNPDLVL 213 (257)
Q Consensus 187 a~~~l~~g~~D~V~igR~~----iadP~l~~ 213 (257)
+..+++.| ||.|-.+=.- ..||.+-.
T Consensus 323 slaAveAG-a~~VD~ti~GlGertGN~~lE~ 352 (718)
T 3bg3_A 323 MLACAQAG-ADVVDVAADSMSGMTSQPSMGA 352 (718)
T ss_dssp HHHHHHTT-CSEEEEBCGGGCSTTSCCBHHH
T ss_pred HHHHHHhC-CCEEEecCcccccccCchhHHH
Confidence 77899988 8888655433 35776543
No 426
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=89.61 E-value=4.5 Score=35.32 Aligned_cols=143 Identities=11% Similarity=0.111 Sum_probs=83.8
Q ss_pred HHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCCC
Q 025135 30 AALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDATD 109 (257)
Q Consensus 30 AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~ 109 (257)
..++|.++|.|.|.|..+. |+. ++....+-+.+.-...+.++++.+|+. |. .|.+-++..-...+. .
T Consensus 86 ~i~~a~~~g~~~v~i~~~~--------sd~--~~~~~l~~s~~e~l~~~~~~v~~ak~~-G~-~v~~~i~~~~~~~~~-~ 152 (307)
T 1ydo_A 86 GLENALEGGINEACVFMSA--------SET--HNRKNINKSTSESLHILKQVNNDAQKA-NL-TTRAYLSTVFGCPYE-K 152 (307)
T ss_dssp HHHHHHHHTCSEEEEEEES--------SHH--HHHTTTCSCHHHHHHHHHHHHHHHHHT-TC-EEEEEEECTTCBTTT-B
T ss_pred hHHHHHhCCcCEEEEEeec--------CHH--HHHHHhCCCHHHHHHHHHHHHHHHHHC-CC-EEEEEEEEEecCCcC-C
Confidence 4567788999999886554 111 122234456666667777888887764 33 333333321000111 1
Q ss_pred CCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhC-CcEEEeC----CCCH
Q 025135 110 SDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQ-GTFICSG----GFTR 184 (257)
Q Consensus 110 ~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~G----~it~ 184 (257)
..+.+...++++.+.++| ++.|.+... .+ ...+......++.+++.++ +||-.=+ |+-.
T Consensus 153 ~~~~~~~~~~~~~~~~~G------a~~i~l~DT----~G------~~~P~~v~~lv~~l~~~~~~~~l~~H~Hnd~Gla~ 216 (307)
T 1ydo_A 153 DVPIEQVIRLSEALFEFG------ISELSLGDT----IG------AANPAQVETVLEALLARFPANQIALHFHDTRGTAL 216 (307)
T ss_dssp CCCHHHHHHHHHHHHHHT------CSCEEEECS----SC------CCCHHHHHHHHHHHHTTSCGGGEEEECBGGGSCHH
T ss_pred CCCHHHHHHHHHHHHhcC------CCEEEEcCC----CC------CcCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHH
Confidence 245788899999999999 777766542 11 1123344566778888774 5543322 1225
Q ss_pred HHHHHHHHcCCCcEEEec
Q 025135 185 ELGIQALAEDGADLVAYG 202 (257)
Q Consensus 185 ~~a~~~l~~g~~D~V~ig 202 (257)
..+..+++.| ++.|-.+
T Consensus 217 AN~laAv~aG-a~~vd~t 233 (307)
T 1ydo_A 217 ANMVTALQMG-ITVFDGS 233 (307)
T ss_dssp HHHHHHHHHT-CCEEEEB
T ss_pred HHHHHHHHhC-CCEEEEc
Confidence 6778899988 8877543
No 427
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=89.60 E-value=5 Score=34.41 Aligned_cols=104 Identities=12% Similarity=0.060 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHh-cCCccCCceeEEEeeC--CCcccCCCcCCC
Q 025135 77 FLMQLVREVIVAIGADRVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNK-LQIDQGAKLTYLHVTQ--PRYTAYGQTESG 153 (257)
Q Consensus 77 ~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~-~G~~~~~~vd~i~v~~--~~~~~~~~~~~~ 153 (257)
++.++++.+|+...+.++++-+... ..+++.+.++.+++ .| +|+|+++- |....-...
T Consensus 84 ~~~~~~~~~~~~~~~~p~~v~l~~~----------~~~~~~~~a~~~~~~~g------~d~iei~~~~p~~~~g~~~--- 144 (311)
T 1ep3_A 84 IMTEKLPWLNENFPELPIIANVAGS----------EEADYVAVCAKIGDAAN------VKAIELNISCPNVKHGGQA--- 144 (311)
T ss_dssp HHHTHHHHHHHHCTTSCEEEEECCS----------SHHHHHHHHHHHTTSTT------EEEEEEECCSEEGGGTTEE---
T ss_pred HHHHHHHHHHhcCCCCcEEEEEcCC----------CHHHHHHHHHHHhccCC------CCEEEEeCCCCCCCCchhh---
Confidence 4444566677633233788777642 36778889999988 88 89887653 211000000
Q ss_pred CCCCc-hhHHHHHHHHHHHhCCcEEEe--CCC-CHHH-HHHHHHcCCCcEEEe
Q 025135 154 RPGTE-DEEAQLLRTWRRSYQGTFICS--GGF-TREL-GIQALAEDGADLVAY 201 (257)
Q Consensus 154 ~~~~~-~~~~~~~~~ir~~~~~pvi~~--G~i-t~~~-a~~~l~~g~~D~V~i 201 (257)
+... ....+.++.+++.+++||++- .++ +..+ +..+.+.| +|+|.+
T Consensus 145 -~g~~~~~~~eii~~v~~~~~~pv~vk~~~~~~~~~~~a~~l~~~G-~d~i~v 195 (311)
T 1ep3_A 145 -FGTDPEVAAALVKACKAVSKVPLYVKLSPNVTDIVPIAKAVEAAG-ADGLTM 195 (311)
T ss_dssp -GGGCHHHHHHHHHHHHHHCSSCEEEEECSCSSCSHHHHHHHHHTT-CSEEEE
T ss_pred -hcCCHHHHHHHHHHHHHhcCCCEEEEECCChHHHHHHHHHHHHcC-CCEEEE
Confidence 0011 123456777888888897752 244 4445 56665655 999988
No 428
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=89.52 E-value=9 Score=32.55 Aligned_cols=154 Identities=16% Similarity=0.067 Sum_probs=86.1
Q ss_pred HHHHHHHHcCCCEEEecc-cccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCC
Q 025135 29 QAALNAIQAGFDGIEIHG-AHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDA 107 (257)
Q Consensus 29 ~AA~~a~~aGfDgVEIh~-a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~ 107 (257)
-.|+.+.++|||.|-+-. +.+.. + -..|.-.=+++ -....+++|++.+. -||.+.+.. +|.
T Consensus 31 ~sA~~~~~aG~dai~vg~~s~a~~----~-----G~pD~~~vt~~----em~~~~~~I~r~~~-~pviaD~~~--Gyg-- 92 (255)
T 2qiw_A 31 WSAGLVEEAGFSGLTIGSHPVADA----T-----GSSDGENMNFA----DYMAVVKKITSAVS-IPVSVDVES--GYG-- 92 (255)
T ss_dssp HHHHHHHHTTCSCEEECHHHHHHH----T-----TCCTTTCSCHH----HHHHHHHHHHHHCS-SCEEEECTT--CTT--
T ss_pred HHHHHHHHcCCCEEEEChHHHHHh----C-----CCCCCCCcCHH----HHHHHHHHHHhcCC-CCEEeccCC--CcC--
Confidence 467788899999999864 33321 0 11121111233 34555666666665 378777652 232
Q ss_pred CCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHH---hCCcEEEeCCCC-
Q 025135 108 TDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRS---YQGTFICSGGFT- 183 (257)
Q Consensus 108 ~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~---~~~pvi~~G~it- 183 (257)
.+. .+.++.|.+.| +..|++...... .+.. ..+.......++.++++ .++|+..+++.+
T Consensus 93 ---~~~---~~~~~~l~~aG------a~gv~iEd~~~~-~~k~----l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~ 155 (255)
T 2qiw_A 93 ---LSP---ADLIAQILEAG------AVGINVEDVVHS-EGKR----VREAQEHADYIAAARQAADVAGVDVVINGRTDA 155 (255)
T ss_dssp ---CCH---HHHHHHHHHTT------CCEEEECSEEGG-GTTE----ECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECH
T ss_pred ---cHH---HHHHHHHHHcC------CcEEEECCCCCC-CCCc----ccCHHHHHHHHHHHHHHHHhcCCCeEEEEEech
Confidence 233 56778888899 888988653211 0100 00111223333334333 367866655542
Q ss_pred ---------------HHHHHHHHHcCCCcEEEechHHhhCchHHHHHHcCCC
Q 025135 184 ---------------RELGIQALAEDGADLVAYGRLFISNPDLVLRFKLNAP 220 (257)
Q Consensus 184 ---------------~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~g~~ 220 (257)
.+++..+.+.| ||.|.+ ..+.+++..+++.+..+
T Consensus 156 ~~~g~~~~~~~~~~ai~ra~a~~eAG-Ad~i~~--e~~~~~~~~~~i~~~~~ 204 (255)
T 2qiw_A 156 VKLGADVFEDPMVEAIKRIKLMEQAG-ARSVYP--VGLSTAEQVERLVDAVS 204 (255)
T ss_dssp HHHCTTTSSSHHHHHHHHHHHHHHHT-CSEEEE--CCCCSHHHHHHHHTTCS
T ss_pred hhccCCcchHHHHHHHHHHHHHHHcC-CcEEEE--cCCCCHHHHHHHHHhCC
Confidence 12345555666 999988 34667789999987654
No 429
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=89.49 E-value=3.8 Score=34.90 Aligned_cols=97 Identities=10% Similarity=-0.037 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcC----------CCCCCCchhHHHHHHHHHHH-hCCcEEEeCC
Q 025135 113 LGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTE----------SGRPGTEDEEAQLLRTWRRS-YQGTFICSGG 181 (257)
Q Consensus 113 ~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~ir~~-~~~pvi~~G~ 181 (257)
.+.+.++++.|++.| +|+|++--|.-+...... ..+. .-......++.+|+. .++||++-+-
T Consensus 30 ~~~~~~~~~~l~~~G------aD~ieig~P~sdp~~DG~~i~~a~~~al~~G~-~~~~~~~~v~~ir~~~~~~Pv~lm~y 102 (268)
T 1qop_A 30 IEQSLKIIDTLIDAG------ADALELGVPFSDPLADGPTIQNANLRAFAAGV-TPAQCFEMLAIIREKHPTIPIGLLMY 102 (268)
T ss_dssp HHHHHHHHHHHHHTT------CSSEEEECCCSCCTTCCHHHHHHHHHHHHTTC-CHHHHHHHHHHHHHHCSSSCEEEEEC
T ss_pred HHHHHHHHHHHHHCC------CCEEEECCCCCCccCCCHHHHHHHHHHHHcCC-CHHHHHHHHHHHHhcCCCCCEEEEEc
Confidence 577889999999999 999998654321100000 0000 000112456788888 7899876442
Q ss_pred CC-------HHHHHHHHHcCCCcEEEechHHhhCc-hHHHHHHc
Q 025135 182 FT-------RELGIQALAEDGADLVAYGRLFISNP-DLVLRFKL 217 (257)
Q Consensus 182 it-------~~~a~~~l~~g~~D~V~igR~~iadP-~l~~k~~~ 217 (257)
.+ ...++.+.+.| +|.|.+---...+. .+.+.+++
T Consensus 103 ~n~v~~~g~~~~~~~~~~aG-adgii~~d~~~e~~~~~~~~~~~ 145 (268)
T 1qop_A 103 ANLVFNNGIDAFYARCEQVG-VDSVLVADVPVEESAPFRQAALR 145 (268)
T ss_dssp HHHHHTTCHHHHHHHHHHHT-CCEEEETTCCGGGCHHHHHHHHH
T ss_pred ccHHHHhhHHHHHHHHHHcC-CCEEEEcCCCHHHHHHHHHHHHH
Confidence 22 24456677776 99877754333322 34444443
No 430
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=89.40 E-value=3.9 Score=36.58 Aligned_cols=147 Identities=11% Similarity=0.003 Sum_probs=75.4
Q ss_pred HHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhH----HHHHHHHHHHHh--CCCeEEEEEccCCC
Q 025135 30 AALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRF----LMQLVREVIVAI--GADRVGVRMSPAID 103 (257)
Q Consensus 30 AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~----~~eiv~aiR~~v--g~~~v~vrls~~~~ 103 (257)
..+.+..+||-+|++..-- +-.|--+|. -|--++-..+-||+-| +...++.+++.- .+.||++-|..
T Consensus 63 ~~~~l~~~G~G~v~~ktvt--~~pq~GNp~--PR~~~~~~~~iN~~G~~n~G~~~~~~~l~~~~~~~~~pvivsI~G--- 135 (354)
T 4ef8_A 63 ELVAMTESASGSLVSKSCT--PALREGNPT--PRYQALPLGSINSMGLPNNGFDFYLAYAAEQHDYGKKPLFLSMSG--- 135 (354)
T ss_dssp HHHHHHHSSCSCEEEEEEC--SSCBCCSCS--CCEEEETTEEEECCCCCBCCHHHHHHHHHHTCCTTTCCEEEEECC---
T ss_pred HHHHHHHcCCCeEEeCccc--CcccCCCCC--CcEEecchhhhccCCCCCcCHHHHHHHHHHHhhcCCCcEEEEecc---
Confidence 3445567899999986432 001111111 1111111222343211 233344444321 12378877753
Q ss_pred CCCCCCCCcHHHHHHHHHHHH---hcCCccCCceeEEEeeC--CCcccCCCcCCCCCCCc-hhHHHHHHHHHHHhCCcEE
Q 025135 104 HLDATDSDPLGLGLAVIQGLN---KLQIDQGAKLTYLHVTQ--PRYTAYGQTESGRPGTE-DEEAQLLRTWRRSYQGTFI 177 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~L~---~~G~~~~~~vd~i~v~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~ir~~~~~pvi 177 (257)
.+.+++.+.++.++ +.| +|+|++.- |.... .. ..... ....+.++.+++.+++||+
T Consensus 136 -------~~~~d~~~~a~~l~~~~~~g------~d~ielNisCPn~~g-g~----~l~~~~e~~~~il~av~~~~~~PV~ 197 (354)
T 4ef8_A 136 -------LSMRENVEMCKRLAAVATEK------GVILELNLSCPNVPG-KP----QVAYDFDAMRQCLTAVSEVYPHSFG 197 (354)
T ss_dssp -------SSHHHHHHHHHHHHHHHHHH------CCEEEEECSSCCSTT-SC----CGGGSHHHHHHHHHHHHHHCCSCEE
T ss_pred -------CCHHHHHHHHHHHhhhhhcC------CCEEEEeCCCCCCCC-ch----hhccCHHHHHHHHHHHHHhhCCCeE
Confidence 24788889999998 567 78877643 32211 00 00011 2234567788998899987
Q ss_pred EeC--CCCHHHH---HHHHHcCC-CcEEEe
Q 025135 178 CSG--GFTRELG---IQALAEDG-ADLVAY 201 (257)
Q Consensus 178 ~~G--~it~~~a---~~~l~~g~-~D~V~i 201 (257)
+=- +++.++. .+++++.. +|+|.+
T Consensus 198 vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~ 227 (354)
T 4ef8_A 198 VKMPPYFDFAHFDAAAEILNEFPKVQFITC 227 (354)
T ss_dssp EEECCCCSHHHHHHHHHHHHTCTTEEEEEE
T ss_pred EEecCCCCHHHHHHHHHHHHhCCCccEEEE
Confidence 643 2354433 34444665 999875
No 431
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=89.37 E-value=1.6 Score=38.69 Aligned_cols=68 Identities=15% Similarity=0.254 Sum_probs=46.7
Q ss_pred HHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHHHcCC
Q 025135 117 LAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQALAEDG 195 (257)
Q Consensus 117 ~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~~g~ 195 (257)
.+.++.+.+.|. .++++++... . + .....++.++.+++.++.|++..|.+ ++++|+.+++.|
T Consensus 108 ~~~a~~~~~~g~----~~~~i~i~~~-~---G--------~~~~~~~~i~~lr~~~~~~~vi~G~v~s~e~A~~a~~aG- 170 (336)
T 1ypf_A 108 YEFVQQLAAEHL----TPEYITIDIA-H---G--------HSNAVINMIQHIKKHLPESFVIAGNVGTPEAVRELENAG- 170 (336)
T ss_dssp HHHHHHHHHTTC----CCSEEEEECS-S---C--------CSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHT-
T ss_pred HHHHHHHHhcCC----CCCEEEEECC-C---C--------CcHHHHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcC-
Confidence 355777777761 2566665321 0 1 12345577888999987665556655 899999999998
Q ss_pred CcEEEe
Q 025135 196 ADLVAY 201 (257)
Q Consensus 196 ~D~V~i 201 (257)
+|+|.+
T Consensus 171 ad~Ivv 176 (336)
T 1ypf_A 171 ADATKV 176 (336)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 999999
No 432
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=89.24 E-value=1.4 Score=40.94 Aligned_cols=68 Identities=16% Similarity=0.167 Sum_probs=49.5
Q ss_pred HHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh-CCcEEEeCCCCHHHHHHHHHcC
Q 025135 116 GLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY-QGTFICSGGFTRELGIQALAED 194 (257)
Q Consensus 116 ~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~G~it~~~a~~~l~~g 194 (257)
+.+.++.+.++| ++.+.++.. . + ......+.++.+++.+ +.||++.+..+++++..+.+.|
T Consensus 238 ~~~~a~~l~~aG------vd~v~i~~~-~---G--------~~~~~~e~i~~i~~~~p~~pvi~g~~~t~e~a~~l~~~G 299 (494)
T 1vrd_A 238 TMERVEKLVKAG------VDVIVIDTA-H---G--------HSRRVIETLEMIKADYPDLPVVAGNVATPEGTEALIKAG 299 (494)
T ss_dssp HHHHHHHHHHTT------CSEEEECCS-C---C--------SSHHHHHHHHHHHHHCTTSCEEEEEECSHHHHHHHHHTT
T ss_pred HHHHHHHHHHhC------CCEEEEEec-C---C--------chHHHHHHHHHHHHHCCCceEEeCCcCCHHHHHHHHHcC
Confidence 455778888999 788776431 0 0 1223457788899988 6888875556999999998887
Q ss_pred CCcEEEec
Q 025135 195 GADLVAYG 202 (257)
Q Consensus 195 ~~D~V~ig 202 (257)
+|+|.++
T Consensus 300 -~d~I~v~ 306 (494)
T 1vrd_A 300 -ADAVKVG 306 (494)
T ss_dssp -CSEEEEC
T ss_pred -CCEEEEc
Confidence 9999883
No 433
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=89.23 E-value=1.2 Score=37.25 Aligned_cols=79 Identities=15% Similarity=0.067 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHH
Q 025135 113 LGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQAL 191 (257)
Q Consensus 113 ~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l 191 (257)
.+++.++++.+.+.| ++.+.+... .+...+.++.+++.++.-+++.|-+ +.++++.++
T Consensus 37 ~~~~~~~~~al~~gG------v~~iel~~k---------------~~~~~~~i~~l~~~~~~~~igagtvl~~d~~~~A~ 95 (225)
T 1mxs_A 37 EEDILPLADALAAGG------IRTLEVTLR---------------SQHGLKAIQVLREQRPELCVGAGTVLDRSMFAAVE 95 (225)
T ss_dssp GGGHHHHHHHHHHTT------CCEEEEESS---------------STHHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHCC------CCEEEEecC---------------CccHHHHHHHHHHhCcccEEeeCeEeeHHHHHHHH
Confidence 456788999999999 888988642 1122356677778775445666666 899999999
Q ss_pred HcCCCcEEEechHHhhCchHHHHHH
Q 025135 192 AEDGADLVAYGRLFISNPDLVLRFK 216 (257)
Q Consensus 192 ~~g~~D~V~igR~~iadP~l~~k~~ 216 (257)
+.| +|+|..+- .|+++.+..+
T Consensus 96 ~aG-Ad~v~~p~---~d~~v~~~~~ 116 (225)
T 1mxs_A 96 AAG-AQFVVTPG---ITEDILEAGV 116 (225)
T ss_dssp HHT-CSSEECSS---CCHHHHHHHH
T ss_pred HCC-CCEEEeCC---CCHHHHHHHH
Confidence 998 99999873 5777755444
No 434
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=89.18 E-value=5.4 Score=33.94 Aligned_cols=134 Identities=13% Similarity=0.093 Sum_probs=78.2
Q ss_pred HHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHh---CCC-eEEEEEccCCC
Q 025135 28 RQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAI---GAD-RVGVRMSPAID 103 (257)
Q Consensus 28 ~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~v---g~~-~v~vrls~~~~ 103 (257)
.+.+++..++|.+||.|-.+.+ + + |..+.. ..-..+.|++++++. |.+ .|.-|....
T Consensus 96 ~~~~~~l~~aGa~gv~iEd~~~-~------~---------~k~l~~-~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~-- 156 (255)
T 2qiw_A 96 ADLIAQILEAGAVGINVEDVVH-S------E---------GKRVRE-AQEHADYIAAARQAADVAGVDVVINGRTDAV-- 156 (255)
T ss_dssp HHHHHHHHHTTCCEEEECSEEG-G------G---------TTEECC-HHHHHHHHHHHHHHHHHHTCCCEEEEEECHH--
T ss_pred HHHHHHHHHcCCcEEEECCCCC-C------C---------CCcccC-HHHHHHHHHHHHHHHHhcCCCeEEEEEechh--
Confidence 5667777789999999987630 0 0 111111 123455666666653 443 466676531
Q ss_pred CCCCCC-CCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEe--C
Q 025135 104 HLDATD-SDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICS--G 180 (257)
Q Consensus 104 ~~~~~~-~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~--G 180 (257)
..+..+ .+..+++++=++.++++| .|.|-+... + ..+.++.|.+.+++|+.++ .
T Consensus 157 ~~g~~~~~~~~~~ai~ra~a~~eAG------Ad~i~~e~~---------------~--~~~~~~~i~~~~~~P~n~~~~~ 213 (255)
T 2qiw_A 157 KLGADVFEDPMVEAIKRIKLMEQAG------ARSVYPVGL---------------S--TAEQVERLVDAVSVPVNITAHP 213 (255)
T ss_dssp HHCTTTSSSHHHHHHHHHHHHHHHT------CSEEEECCC---------------C--SHHHHHHHHTTCSSCBEEECBT
T ss_pred hccCCcchHHHHHHHHHHHHHHHcC------CcEEEEcCC---------------C--CHHHHHHHHHhCCCCEEEEecC
Confidence 000000 124778888899999999 676655321 1 1245677888889995554 2
Q ss_pred CC-CHH-HHHHHHHcCCCcEEEechH
Q 025135 181 GF-TRE-LGIQALAEDGADLVAYGRL 204 (257)
Q Consensus 181 ~i-t~~-~a~~~l~~g~~D~V~igR~ 204 (257)
+. ||. ..+++-+-| +..|.++-.
T Consensus 214 ~~~~p~~~~~eL~~lG-v~~v~~~~~ 238 (255)
T 2qiw_A 214 VDGHGAGDLATLAGLG-VRRVTFGPL 238 (255)
T ss_dssp TTBBTTBCHHHHHHTT-CCEEECTTH
T ss_pred CCCCCCCCHHHHHHcC-CCEEEEHHH
Confidence 22 332 234444455 999999866
No 435
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=89.17 E-value=12 Score=33.57 Aligned_cols=136 Identities=20% Similarity=0.166 Sum_probs=79.1
Q ss_pred HHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCCCC
Q 025135 31 ALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDATDS 110 (257)
Q Consensus 31 A~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~ 110 (257)
.++|.++|.|.|.|..+- ..-++. ..+-+.+.-.+.+.+.++.+|+. |. .+-++++..+.+ .
T Consensus 80 i~~a~~~g~~~v~i~~~~----------s~~~~~-~~~~s~~e~l~~~~~~v~~ak~~-g~-~~~v~~~~ed~~-----~ 141 (382)
T 2ztj_A 80 AKVAVETGVQGIDLLFGT----------SKYLRA-PHGRDIPRIIEEAKEVIAYIREA-AP-HVEVRFSAEDTF-----R 141 (382)
T ss_dssp HHHHHHTTCSEEEEEECC-------------------CCCHHHHHHHHHHHHHHHHHH-CT-TSEEEEEETTTT-----T
T ss_pred HHHHHHcCCCEEEEEecc----------CHHHHH-HhCCCHHHHHHHHHHHHHHHHHc-CC-CEEEEEEEEeCC-----C
Confidence 467778999988875543 223455 77777776677788888888876 32 245566653222 1
Q ss_pred CcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHH--hCCcEEEeC----CCCH
Q 025135 111 DPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRS--YQGTFICSG----GFTR 184 (257)
Q Consensus 111 ~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~--~~~pvi~~G----~it~ 184 (257)
.+.+...++++.+.++ + +.|.+... .+ ...+......++.+++. .++||-.=. |.-.
T Consensus 142 ~~~~~~~~~~~~~~~~-a------~~i~l~DT----~G------~~~P~~~~~lv~~l~~~~~~~~~i~~H~Hnd~GlAv 204 (382)
T 2ztj_A 142 SEEQDLLAVYEAVAPY-V------DRVGLADT----VG------VATPRQVYALVREVRRVVGPRVDIEFHGHNDTGCAI 204 (382)
T ss_dssp SCHHHHHHHHHHHGGG-C------SEEEEEET----TS------CCCHHHHHHHHHHHHHHHTTTSEEEEEEBCTTSCHH
T ss_pred CCHHHHHHHHHHHHHh-c------CEEEecCC----CC------CCCHHHHHHHHHHHHHhcCCCCeEEEEeCCCccHHH
Confidence 3577888899999887 5 33443221 00 01233345667778887 455543321 1225
Q ss_pred HHHHHHHHcCCCcEEEec
Q 025135 185 ELGIQALAEDGADLVAYG 202 (257)
Q Consensus 185 ~~a~~~l~~g~~D~V~ig 202 (257)
..+..+++.| ||.|-.+
T Consensus 205 AN~laAv~aG-a~~vd~t 221 (382)
T 2ztj_A 205 ANAYEAIEAG-ATHVDTT 221 (382)
T ss_dssp HHHHHHHHTT-CCEEEEB
T ss_pred HHHHHHHHhC-CCEEEEc
Confidence 6777889988 8887643
No 436
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=89.14 E-value=1.7 Score=38.77 Aligned_cols=42 Identities=19% Similarity=0.337 Sum_probs=33.8
Q ss_pred hHHHHHHHHHHHh-CCcEEEeCCCCHHHHHHHHHcCCCcEEEec
Q 025135 160 EEAQLLRTWRRSY-QGTFICSGGFTRELGIQALAEDGADLVAYG 202 (257)
Q Consensus 160 ~~~~~~~~ir~~~-~~pvi~~G~it~~~a~~~l~~g~~D~V~ig 202 (257)
..++.++.+|+.+ ++||++.+..|+++|+.+++.| +|+|.++
T Consensus 147 ~~~~~i~~lr~~~~~~~vi~g~v~t~e~A~~a~~aG-aD~I~v~ 189 (351)
T 2c6q_A 147 HFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSG-ADIIKVG 189 (351)
T ss_dssp HHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTT-CSEEEEC
T ss_pred HHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHhC-CCEEEEC
Confidence 3457788899998 7888864445999999999998 9999664
No 437
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=89.09 E-value=11 Score=32.76 Aligned_cols=158 Identities=8% Similarity=-0.025 Sum_probs=86.5
Q ss_pred HHHHHHHHcCCCEEEeccc-ccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCC
Q 025135 29 QAALNAIQAGFDGIEIHGA-HGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDA 107 (257)
Q Consensus 29 ~AA~~a~~aGfDgVEIh~a-~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~ 107 (257)
-.|+.+.++|||+|-+-++ .+.- ..=-|.++ .=+++ -....+++|.+.+.. ||.+.+-- +|
T Consensus 32 ~sA~i~e~aGf~ai~vs~s~~a~~--~lG~pD~~------~vt~~----em~~~~~~I~r~~~~-PviaD~d~--Gy--- 93 (287)
T 3b8i_A 32 MSARIAADLGFECGILGGSVASLQ--VLAAPDFA------LITLS----EFVEQATRIGRVARL-PVIADADH--GY--- 93 (287)
T ss_dssp HHHHHHHHTTCSCEEECHHHHHHH--HHSCCSSS------CSCHH----HHHHHHHHHHTTCSS-CEEEECTT--CS---
T ss_pred HHHHHHHHcCCCEEEeCcHHHHHH--hcCCCCCC------CCCHH----HHHHHHHHHHhcCCC-CEEEECCC--CC---
Confidence 4688888999999988654 2211 01012221 11222 344555666655543 77766642 23
Q ss_pred CCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcc-cCCCcCCCCCCCchhHHHHHHHHHHHh----CCcEEEeCCC
Q 025135 108 TDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYT-AYGQTESGRPGTEDEEAQLLRTWRRSY----QGTFICSGGF 182 (257)
Q Consensus 108 ~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ir~~~----~~pvi~~G~i 182 (257)
+ +.+.+.+.++.|+++| +..|++...... ..+. ..+.. ....+++.+|+..+ ..+...+++-
T Consensus 94 --g-~~~~~~~~v~~l~~aG------a~gv~iED~~~pKrcgh-~~gkl---~~~~e~~~~I~aa~~a~~~~~~~i~aRt 160 (287)
T 3b8i_A 94 --G-NALNVMRTVVELERAG------IAALTIEDTLLPAQFGR-KSTDL---ICVEEGVGKIRAALEARVDPALTIIART 160 (287)
T ss_dssp --S-SHHHHHHHHHHHHHHT------CSEEEEECBCCSCCTTT-CTTCB---CCHHHHHHHHHHHHHHCCSTTSEEEEEE
T ss_pred --C-CHHHHHHHHHHHHHhC------CeEEEEcCCCCccccCC-CCCCc---cCHHHHHHHHHHHHHcCCCCCcEEEEec
Confidence 1 3567888899999999 888998664321 1110 01111 11223444444432 2233333332
Q ss_pred ---------CHHHHHHHHHcCCCcEEEechHHhhCchHHHHHHcCCC
Q 025135 183 ---------TRELGIQALAEDGADLVAYGRLFISNPDLVLRFKLNAP 220 (257)
Q Consensus 183 ---------t~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~g~~ 220 (257)
..+.+..+.+.| +|.|.+= .+.+++..+++.+..+
T Consensus 161 daa~~gl~~ai~Ra~ay~eAG-Ad~i~~e--~~~~~~~~~~i~~~~~ 204 (287)
T 3b8i_A 161 NAELIDVDAVIQRTLAYQEAG-ADGICLV--GVRDFAHLEAIAEHLH 204 (287)
T ss_dssp ETTTSCHHHHHHHHHHHHHTT-CSEEEEE--CCCSHHHHHHHHTTCC
T ss_pred hhhhcCHHHHHHHHHHHHHcC-CCEEEec--CCCCHHHHHHHHHhCC
Confidence 134556666666 9999885 2567789999987654
No 438
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=89.00 E-value=0.93 Score=42.07 Aligned_cols=139 Identities=17% Similarity=0.066 Sum_probs=70.1
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEE
Q 025135 18 SEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGV 96 (257)
Q Consensus 18 ~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~v 96 (257)
-||-.++..|++++. .+.|+|.|-+|+.. |. +.+++..+..+.. .|.+
T Consensus 87 ~DIpnT~~~~a~~~~--~~lg~d~vTvh~~~--------------------G~---------~~l~~~~~~~~~~v~vL~ 135 (453)
T 3qw4_B 87 GDIADTADAYATSAF--KHLNAHAITASPYM--------------------GS---------DSLQPFMRYPDKAVFVLC 135 (453)
T ss_dssp CCCHHHHHHHHHHHH--TTSCCSEEEECSTT--------------------CH---------HHHHHHHTCTTSEEEEEE
T ss_pred CChHHHHHHHHHHHH--HHcCCCEEEEcccC--------------------CH---------HHHHHHHHhhCCcEEEEE
Confidence 366677776666543 14899999998644 31 1233333333333 4677
Q ss_pred EEccCC--CCCCCCC-CCcH-HHHHHHHH-HHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHH
Q 025135 97 RMSPAI--DHLDATD-SDPL-GLGLAVIQ-GLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRS 171 (257)
Q Consensus 97 rls~~~--~~~~~~~-~~~~-~~~~~l~~-~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~ 171 (257)
++|..+ ++++.+. +.+. +...++++ ...+.| .+-+.++. ..+ +.++.+|+.
T Consensus 136 ~tS~~~~~~lq~~~~~~~~~~~~V~~~a~~~~~~~g------~~GvV~ga---------------t~~---~e~~~ir~~ 191 (453)
T 3qw4_B 136 KTSNKGSNDLQCLRVGDRYLYEAVAERAEGPWNVNG------NVGLVVGA---------------TDP---VALARVRAR 191 (453)
T ss_dssp ECSSGGGGGTTTSEETTEEHHHHHHHHHTTTTCTTS------CEEEEECT---------------TCH---HHHHHHHHH
T ss_pred eCCCcchHHHHhcccCCCCHHHHHHHHHHHHHhhcC------CeEEEECC---------------CCH---HHHHHHHHh
Confidence 777431 2333211 1122 22333333 333455 55554321 112 234668887
Q ss_pred hC-CcEEEeC-CC---CHHHHHHHHHc--CCCcEEEechHHhhCchH
Q 025135 172 YQ-GTFICSG-GF---TRELGIQALAE--DGADLVAYGRLFISNPDL 211 (257)
Q Consensus 172 ~~-~pvi~~G-~i---t~~~a~~~l~~--g~~D~V~igR~~iadP~l 211 (257)
++ .++++-| +. ||++|.+.-.+ |.-.++.+||+.+.-+|.
T Consensus 192 ~~~~~~l~PGig~qg~tp~~a~~~g~d~~~~~~livvgR~I~~A~dp 238 (453)
T 3qw4_B 192 APTLWFLVPGIGAQGGSLKASLDAGLRADGSGMLINVSRGLARAADP 238 (453)
T ss_dssp CSSCCEEECCSSTTCCCHHHHHHHHCCTTSCCEEEEESHHHHSCSCH
T ss_pred CCCCeEEECCcCCCCCCHHHHHHhcCCcccCCceEecChhhccCCCH
Confidence 75 3444333 22 56665443221 223459999999965554
No 439
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=88.65 E-value=12 Score=32.69 Aligned_cols=159 Identities=16% Similarity=0.109 Sum_probs=86.4
Q ss_pred HHHHHHHHHcCCCEEEecc-cccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCC
Q 025135 28 RQAALNAIQAGFDGIEIHG-AHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLD 106 (257)
Q Consensus 28 ~~AA~~a~~aGfDgVEIh~-a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~ 106 (257)
.-.|+.+.++|||+|-+-+ +.+. ..+ -..|.-.=+++ -+...+++|.+.+.. ||.+.+-- +|
T Consensus 32 ~~sA~l~e~aGf~ai~vs~~s~a~---~~~-----G~pD~~~vt~~----em~~~~~~I~r~~~~-PviaD~d~--Gy-- 94 (298)
T 3eoo_A 32 AYAAKMAEAVGFKAVYLSGGGVAA---NSL-----GIPDLGISTMD----DVLVDANRITNATNL-PLLVDIDT--GW-- 94 (298)
T ss_dssp HHHHHHHHHHTCSCEEECHHHHHH---HTT-----CCCSSSCCCHH----HHHHHHHHHHHHCCS-CEEEECTT--CS--
T ss_pred HHHHHHHHHcCCCEEEECcHHHHH---Hhc-----CCCCCCCCCHH----HHHHHHHHHHhhcCC-eEEEECCC--CC--
Confidence 4577888899999999865 3220 000 11121111333 344555666655543 77776642 23
Q ss_pred CCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCccc-CCCcCCCCCCCchhHHHHHHHHHHH---h-CCcEEEeCC
Q 025135 107 ATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTA-YGQTESGRPGTEDEEAQLLRTWRRS---Y-QGTFICSGG 181 (257)
Q Consensus 107 ~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ir~~---~-~~pvi~~G~ 181 (257)
+ +.+...+.++.++++| +..|++....... .+. ..+. .-....+++.+|+.+ . +.+++.+++
T Consensus 95 ---g-~~~~v~~~v~~l~~aG------aagv~iEDq~~~k~cGh-~~gk--~l~~~~e~~~ri~Aa~~A~~~~~~~I~AR 161 (298)
T 3eoo_A 95 ---G-GAFNIARTIRSFIKAG------VGAVHLEDQVGQKRCGH-RPGK--ECVPAGEMVDRIKAAVDARTDETFVIMAR 161 (298)
T ss_dssp ---S-SHHHHHHHHHHHHHTT------CSEEEEECBCCCCCTTC-CCCC--CBCCHHHHHHHHHHHHHHCSSTTSEEEEE
T ss_pred ---C-CHHHHHHHHHHHHHhC------CeEEEECCCCCCcccCC-CCCC--eecCHHHHHHHHHHHHHhccCCCeEEEEe
Confidence 1 3566778899999999 8889886533210 000 0000 011223445555433 2 244555555
Q ss_pred CC----------HHHHHHHHHcCCCcEEEechHHhhCchHHHHHHcCC
Q 025135 182 FT----------RELGIQALAEDGADLVAYGRLFISNPDLVLRFKLNA 219 (257)
Q Consensus 182 it----------~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~g~ 219 (257)
.+ .+.+..+.+.| +|+|.+= .+.+++..+++.+..
T Consensus 162 TDa~~~~gldeai~Ra~ay~~AG-AD~if~~--~~~~~ee~~~~~~~~ 206 (298)
T 3eoo_A 162 TDAAAAEGIDAAIERAIAYVEAG-ADMIFPE--AMKTLDDYRRFKEAV 206 (298)
T ss_dssp ECTHHHHHHHHHHHHHHHHHHTT-CSEEEEC--CCCSHHHHHHHHHHH
T ss_pred ehhhhhcCHHHHHHHHHhhHhcC-CCEEEeC--CCCCHHHHHHHHHHc
Confidence 42 12345566666 9999883 236888888877643
No 440
>3chv_A Prokaryotic domain of unknown function (DUF849) W barrel fold; TIM barrel fold, structural genomics, joint center for struc genomics; HET: MSE; 1.45A {Silicibacter pomeroyi dss-3} PDB: 3fa5_A
Probab=88.60 E-value=0.76 Score=40.01 Aligned_cols=50 Identities=16% Similarity=0.173 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCC
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGA 91 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~ 91 (257)
.++.++.|..|.+||+..|-|| .|.++ |. ...+.....|++++||+++++
T Consensus 33 peEia~~A~~~~~AGAaivHlH----------------~Rd~~-G~-ps~d~~~~~e~~~~IR~~~pd 82 (284)
T 3chv_A 33 VSEQVESTQEAFEAGAAIAHCH----------------VRNDD-GT-PSSDPDRFARLTEGLHTHCPG 82 (284)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEC----------------EECTT-SC-EECCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHcCCcEEEee----------------ecCCC-CC-cCCCHHHHHHHHHHHHHhCCC
Confidence 3344788999999999999998 36666 42 233577889999999999653
No 441
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=88.46 E-value=9.2 Score=33.16 Aligned_cols=160 Identities=14% Similarity=0.088 Sum_probs=83.3
Q ss_pred HHHHHHHHcCCCEEEecc-cccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCC
Q 025135 29 QAALNAIQAGFDGIEIHG-AHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDA 107 (257)
Q Consensus 29 ~AA~~a~~aGfDgVEIh~-a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~ 107 (257)
-.|+.+.++|||+|-+-+ +.+.- . -..|.-.=+++ -+...+++|.+.+.. ||.+.+-- +|
T Consensus 26 ~sA~~~~~aG~~ai~vs~~~~a~~---~------G~pD~~~vt~~----em~~~~~~I~~~~~~-PviaD~d~--Gy--- 86 (290)
T 2hjp_A 26 LVAKLAEQAGFGGIWGSGFELSAS---Y------AVPDANILSMS----THLEMMRAIASTVSI-PLIADIDT--GF--- 86 (290)
T ss_dssp HHHHHHHHHTCSEEEECHHHHHHH---T------TSCTTTCSCHH----HHHHHHHHHHTTCSS-CEEEECTT--TT---
T ss_pred HHHHHHHHcCCCEEEEChHHHHHh---C------CCCCCCCCCHH----HHHHHHHHHHhcCCC-CEEEECCC--CC---
Confidence 467888899999999864 22211 0 11121111222 344556666665542 77766542 23
Q ss_pred CCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcc-cCCCcC-CCCCCCchhHHHHHHHHH---HHh-CCcEEEeCC
Q 025135 108 TDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYT-AYGQTE-SGRPGTEDEEAQLLRTWR---RSY-QGTFICSGG 181 (257)
Q Consensus 108 ~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~ir---~~~-~~pvi~~G~ 181 (257)
+ +.+.+.+.++.|+++| +..|++...... ..+... .+. .-.+..+++.+|+ ++. ..+...+++
T Consensus 87 --g-~~~~~~~~v~~l~~aG------a~gv~iED~~~~k~cgH~~~~~k--~l~p~~e~~~kI~Aa~~a~~~~~~~i~aR 155 (290)
T 2hjp_A 87 --G-NAVNVHYVVPQYEAAG------ASAIVMEDKTFPKDTSLRTDGRQ--ELVRIEEFQGKIAAATAARADRDFVVIAR 155 (290)
T ss_dssp --S-SHHHHHHHHHHHHHHT------CSEEEEECBCSSCCC-------C--CBCCHHHHHHHHHHHHHHCSSTTSEEEEE
T ss_pred --C-CHHHHHHHHHHHHHhC------CeEEEEcCCCCCccccccccCCC--cccCHHHHHHHHHHHHHhcccCCcEEEEe
Confidence 1 3567888899999999 888998654321 000000 000 0111223344444 332 223444443
Q ss_pred C--C---------HHHHHHHHHcCCCcEEEechHHhhCchHHHHHHcCCC
Q 025135 182 F--T---------RELGIQALAEDGADLVAYGRLFISNPDLVLRFKLNAP 220 (257)
Q Consensus 182 i--t---------~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~g~~ 220 (257)
- . .+.+..+.+.| +|.|.+=-. +.+++..+++.+..+
T Consensus 156 tda~~a~~g~~~ai~Ra~ay~eAG-Ad~i~~e~~-~~~~~~~~~i~~~~~ 203 (290)
T 2hjp_A 156 VEALIAGLGQQEAVRRGQAYEEAG-ADAILIHSR-QKTPDEILAFVKSWP 203 (290)
T ss_dssp ECTTTTTCCHHHHHHHHHHHHHTT-CSEEEECCC-CSSSHHHHHHHHHCC
T ss_pred ehHhhccccHHHHHHHHHHHHHcC-CcEEEeCCC-CCCHHHHHHHHHHcC
Confidence 2 1 23455666666 999887321 356788888876443
No 442
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=88.40 E-value=3.8 Score=35.46 Aligned_cols=109 Identities=13% Similarity=0.078 Sum_probs=69.2
Q ss_pred EEEEEccCC-CCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhH----HHHHHHH
Q 025135 94 VGVRMSPAI-DHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEE----AQLLRTW 168 (257)
Q Consensus 94 v~vrls~~~-~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i 168 (257)
+++ |+... -|.+++...+.+.+.+.++.+.+.| .|+|++-... ..++.. ....... ...++.+
T Consensus 18 mGi-lN~TpdSFsdgg~~~~~~~a~~~a~~~v~~G------AdiIDIGges-trPga~----~v~~~eE~~rv~pvi~~l 85 (282)
T 1aj0_A 18 MGI-LNVTPDSFSDGGTHNSLIDAVKHANLMINAG------ATIIDVGGES-TRPGAA----EVSVEEELQRVIPVVEAI 85 (282)
T ss_dssp EEE-EECCTTTSCCCCCCTHHHHHHHHHHHHHHHT------CSEEEEESSC-CSTTCC----CCCHHHHHHHHHHHHHHH
T ss_pred EEE-EeCCCCccccccccCCHHHHHHHHHHHHHCC------CCEEEECCCc-CCCCCC----cCCHHHHHHHHHHHHHHH
Confidence 566 76432 3444443456788899999999999 8999986411 111100 0011111 2234456
Q ss_pred HHHhCCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCchHHHHHHc
Q 025135 169 RRSYQGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNPDLVLRFKL 217 (257)
Q Consensus 169 r~~~~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~ 217 (257)
++.+++||.. --.+++.++++|+.| +|+|==..++ .+|....-+++
T Consensus 86 ~~~~~~piSI-DT~~~~va~aAl~aG-a~iINdvsg~-~d~~~~~~~a~ 131 (282)
T 1aj0_A 86 AQRFEVWISV-DTSKPEVIRESAKVG-AHIINDIRSL-SEPGALEAAAE 131 (282)
T ss_dssp HHHCCCEEEE-ECCCHHHHHHHHHTT-CCEEEETTTT-CSTTHHHHHHH
T ss_pred HhhcCCeEEE-eCCCHHHHHHHHHcC-CCEEEECCCC-CCHHHHHHHHH
Confidence 6555777643 334799999999997 9999888887 89988776553
No 443
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=88.35 E-value=12 Score=32.50 Aligned_cols=159 Identities=13% Similarity=0.094 Sum_probs=86.5
Q ss_pred HHHHHHHHcCCCEEEeccc-ccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCC
Q 025135 29 QAALNAIQAGFDGIEIHGA-HGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDA 107 (257)
Q Consensus 29 ~AA~~a~~aGfDgVEIh~a-~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~ 107 (257)
-.|+.+.++|||+|-+-++ .+. ... -..|.--=+++ -+.+.+++|.+.+.. ||.+.+-- +|.
T Consensus 28 ~sA~~~~~aG~~ai~vs~~~~a~--~~~------G~pD~~~vt~~----em~~~~~~I~~~~~~-PviaD~d~--Gyg-- 90 (295)
T 1xg4_A 28 NHALLAQRAGYQAIYLSGGGVAA--GSL------GLPDLGISTLD----DVLTDIRRITDVCSL-PLLVDADI--GFG-- 90 (295)
T ss_dssp HHHHHHHHTTCSCEEECHHHHHH--TTT------CCCSSSCSCHH----HHHHHHHHHHHHCCS-CEEEECTT--CSS--
T ss_pred HHHHHHHHcCCCEEEECchHhhh--hhc------CCCCCCCCCHH----HHHHHHHHHHhhCCC-CEEecCCc--ccC--
Confidence 4688888999999987654 211 000 11221111233 355566777776653 78776642 231
Q ss_pred CCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcc-cCCCcCCCCCCCchhHHHHHHHHHH---Hh-CCcEEEeCCC
Q 025135 108 TDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYT-AYGQTESGRPGTEDEEAQLLRTWRR---SY-QGTFICSGGF 182 (257)
Q Consensus 108 ~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ir~---~~-~~pvi~~G~i 182 (257)
.+.+.+.+.++.++++| ++.|++...... ..+. ..+. .-.+....+.+|+. +. ..++...++-
T Consensus 91 ---~~~~~~~~~v~~l~~aG------a~gv~iEd~~~~k~cgH-~~gk--~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRt 158 (295)
T 1xg4_A 91 ---SSAFNVARTVKSMIKAG------AAGLHIEDQVGAKRSGH-RPNK--AIVSKEEMVDRIRAAVDAKTDPDFVIMART 158 (295)
T ss_dssp ---SSHHHHHHHHHHHHHHT------CSEEEEECBCSSCCCTT-SSSC--CBCCHHHHHHHHHHHHHHCSSTTSEEEEEE
T ss_pred ---CCHHHHHHHHHHHHHcC------CeEEEECCCCCCcccCC-CCCC--ccCCHHHHHHHHHHHHHhccCCCcEEEEec
Confidence 24667888899999999 888998654311 0000 0000 00112233344443 32 3455555554
Q ss_pred C----------HHHHHHHHHcCCCcEEEechHHhhCchHHHHHHcCC
Q 025135 183 T----------RELGIQALAEDGADLVAYGRLFISNPDLVLRFKLNA 219 (257)
Q Consensus 183 t----------~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~g~ 219 (257)
+ .+.|..+.+.| +|+|.+=- +.+++..+++.+..
T Consensus 159 da~~~~gl~~ai~ra~ay~eAG-Ad~i~~e~--~~~~~~~~~i~~~~ 202 (295)
T 1xg4_A 159 DALAVEGLDAAIERAQAYVEAG-AEMLFPEA--ITELAMYRQFADAV 202 (295)
T ss_dssp CCHHHHCHHHHHHHHHHHHHTT-CSEEEETT--CCSHHHHHHHHHHH
T ss_pred HHhhhcCHHHHHHHHHHHHHcC-CCEEEEeC--CCCHHHHHHHHHHc
Confidence 2 23455566666 99998841 35677888777643
No 444
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=88.11 E-value=7.2 Score=34.95 Aligned_cols=82 Identities=13% Similarity=0.149 Sum_probs=64.8
Q ss_pred cHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCCCHHHHHHHH
Q 025135 112 PLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGFTRELGIQAL 191 (257)
Q Consensus 112 ~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~it~~~a~~~l 191 (257)
+.+....-++.|+++| ++.+.++-|. ......+..||+.+++|+++=-.+++..|.+++
T Consensus 44 D~~atv~Qi~~l~~aG------~diVRvavp~---------------~~~a~al~~I~~~~~vPlvaDiHf~~~lal~a~ 102 (366)
T 3noy_A 44 DVEATLNQIKRLYEAG------CEIVRVAVPH---------------KEDVEALEEIVKKSPMPVIADIHFAPSYAFLSM 102 (366)
T ss_dssp CHHHHHHHHHHHHHTT------CCEEEEECCS---------------HHHHHHHHHHHHHCSSCEEEECCSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcC------CCEEEeCCCC---------------hHHHHHHHHHHhcCCCCEEEeCCCCHHHHHHHH
Confidence 4666777788899999 8888876542 233467788999999999986667999999999
Q ss_pred HcCCCcEEEechHHhhCchHHHHH
Q 025135 192 AEDGADLVAYGRLFISNPDLVLRF 215 (257)
Q Consensus 192 ~~g~~D~V~igR~~iadP~l~~k~ 215 (257)
+.| +|.+-+==+.+.+.+=++.+
T Consensus 103 e~G-~dklRINPGNig~~~~~~~v 125 (366)
T 3noy_A 103 EKG-VHGIRINPGNIGKEEIVREI 125 (366)
T ss_dssp HTT-CSEEEECHHHHSCHHHHHHH
T ss_pred HhC-CCeEEECCcccCchhHHHHH
Confidence 998 99999999999876544443
No 445
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=87.97 E-value=15 Score=33.16 Aligned_cols=146 Identities=12% Similarity=0.052 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHH--------------------
Q 025135 24 IDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVR-------------------- 83 (257)
Q Consensus 24 i~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~-------------------- 83 (257)
.+...+.|+.++++|+|.|....=- |.+. ...|-|--..-.+.+.++.+
T Consensus 155 ~e~a~~~a~~~k~aGa~~vk~q~fk---------prts--~~~f~gl~~egl~~L~~~~~~~Gl~~~te~~d~~~~~~l~ 223 (385)
T 3nvt_A 155 YEQVAAVAESIKAKGLKLIRGGAFK---------PRTS--PYDFQGLGLEGLKILKRVSDEYGLGVISEIVTPADIEVAL 223 (385)
T ss_dssp HHHHHHHHHHHHHTTCCEEECBSSC---------CCSS--TTSCCCCTHHHHHHHHHHHHHHTCEEEEECCSGGGHHHHT
T ss_pred HHHHHHHHHHHHHcCCCeEEccccc---------CCCC--hHhhcCCCHHHHHHHHHHHHHcCCEEEEecCCHHHHHHHH
Q ss_pred ----------------HHHHHhCCC--eEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcc
Q 025135 84 ----------------EVIVAIGAD--RVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYT 145 (257)
Q Consensus 84 ----------------aiR~~vg~~--~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~ 145 (257)
.+.++++.. ||.++-..+ .+++++...++.+.+.| +.++-.+|.-...|.
T Consensus 224 ~~vd~lkIgs~~~~n~~LL~~~a~~gkPVilk~G~~---------~t~~e~~~Ave~i~~~G---n~~i~L~~rG~s~yp 291 (385)
T 3nvt_A 224 DYVDVIQIGARNMQNFELLKAAGRVDKPILLKRGLS---------ATIEEFIGAAEYIMSQG---NGKIILCERGIRTYE 291 (385)
T ss_dssp TTCSEEEECGGGTTCHHHHHHHHTSSSCEEEECCTT---------CCHHHHHHHHHHHHTTT---CCCEEEEECCBCCSC
T ss_pred hhCCEEEECcccccCHHHHHHHHccCCcEEEecCCC---------CCHHHHHHHHHHHHHcC---CCeEEEEECCCCCCC
Q ss_pred cCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCCCH-------HHHHHHHHcCCCcEEEe
Q 025135 146 AYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGFTR-------ELGIQALAEDGADLVAY 201 (257)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~it~-------~~a~~~l~~g~~D~V~i 201 (257)
... ........+..+|+.++.||+.--.... .-+..++.-| +|.+++
T Consensus 292 ~~~--------~~~ldl~~i~~lk~~~~lpV~~D~th~~G~r~~v~~~a~AAvA~G-A~gl~i 345 (385)
T 3nvt_A 292 KAT--------RNTLDISAVPILKKETHLPVMVDVTHSTGRKDLLLPCAKAALAIE-ADGVMA 345 (385)
T ss_dssp CSS--------SSBCCTTHHHHHHHHBSSCEEEEHHHHHCCGGGHHHHHHHHHHTT-CSEEEE
T ss_pred CCC--------ccccCHHHHHHHHHhcCCCEEEcCCCCCCccchHHHHHHHHHHhC-CCEEEE
No 446
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=87.95 E-value=1.7 Score=39.30 Aligned_cols=67 Identities=18% Similarity=0.310 Sum_probs=47.1
Q ss_pred HHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh-CCcEEEeCCCCHHHHHHHHHcCC
Q 025135 117 LAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY-QGTFICSGGFTRELGIQALAEDG 195 (257)
Q Consensus 117 ~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~G~it~~~a~~~l~~g~ 195 (257)
.+.++.+.+.| ++++.+... . + ......+.++.+|+.+ ++||++.+..++++++.+++.|
T Consensus 155 ~~~a~~~~~~G------~d~i~i~~~-~---g--------~~~~~~e~i~~ir~~~~~~pviv~~v~~~~~a~~a~~~G- 215 (404)
T 1eep_A 155 IERVEELVKAH------VDILVIDSA-H---G--------HSTRIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISVG- 215 (404)
T ss_dssp HHHHHHHHHTT------CSEEEECCS-C---C--------SSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHTTT-
T ss_pred HHHHHHHHHCC------CCEEEEeCC-C---C--------ChHHHHHHHHHHHHHCCCCeEEEcCCCcHHHHHHHHhcC-
Confidence 44566677888 888877321 1 0 1233456778889988 7898874445899999998887
Q ss_pred CcEEEec
Q 025135 196 ADLVAYG 202 (257)
Q Consensus 196 ~D~V~ig 202 (257)
+|+|.+|
T Consensus 216 ad~I~vg 222 (404)
T 1eep_A 216 ADCLKVG 222 (404)
T ss_dssp CSEEEEC
T ss_pred CCEEEEC
Confidence 9999883
No 447
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=87.77 E-value=0.7 Score=38.69 Aligned_cols=123 Identities=14% Similarity=0.067 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCC
Q 025135 26 QYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHL 105 (257)
Q Consensus 26 ~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~ 105 (257)
.+.+..+.+.++|.|.|+|--.-| .|. | | ..+..++++++|+.+. .++.+-+=..
T Consensus 18 ~l~~~i~~~~~~Gad~ihldi~DG----~fv-p--~-------------~~~g~~~v~~lr~~~~-~~~~vhlmv~---- 72 (230)
T 1tqj_A 18 RLGEEIKAVDEAGADWIHVDVMDG----RFV-P--N-------------ITIGPLIVDAIRPLTK-KTLDVHLMIV---- 72 (230)
T ss_dssp GHHHHHHHHHHTTCSEEEEEEEBS----SSS-S--C-------------BCBCHHHHHHHGGGCC-SEEEEEEESS----
T ss_pred HHHHHHHHHHHcCCCEEEEEEEec----CCC-c--c-------------hhhhHHHHHHHHhhcC-CcEEEEEEcc----
Confidence 345566778889999988765332 222 1 2 1233488999998773 2555433321
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CH
Q 025135 106 DATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TR 184 (257)
Q Consensus 106 ~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~ 184 (257)
++ + .+++.+.++| +|+++++..... . ......++.+++. +..+...=.- |+
T Consensus 73 -----dp-~---~~i~~~~~aG------adgv~vh~e~~~-----------~-~~~~~~~~~i~~~-g~~~gv~~~p~t~ 124 (230)
T 1tqj_A 73 -----EP-E---KYVEDFAKAG------ADIISVHVEHNA-----------S-PHLHRTLCQIREL-GKKAGAVLNPSTP 124 (230)
T ss_dssp -----SG-G---GTHHHHHHHT------CSEEEEECSTTT-----------C-TTHHHHHHHHHHT-TCEEEEEECTTCC
T ss_pred -----CH-H---HHHHHHHHcC------CCEEEECccccc-----------c-hhHHHHHHHHHHc-CCcEEEEEeCCCc
Confidence 22 1 2456677889 899998752000 0 1122445556553 4333222232 66
Q ss_pred HHHHHHHHcCCCcEEEec
Q 025135 185 ELGIQALAEDGADLVAYG 202 (257)
Q Consensus 185 ~~a~~~l~~g~~D~V~ig 202 (257)
.+..+.+.++ +|+|.++
T Consensus 125 ~e~~~~~~~~-~D~v~~m 141 (230)
T 1tqj_A 125 LDFLEYVLPV-CDLILIM 141 (230)
T ss_dssp GGGGTTTGGG-CSEEEEE
T ss_pred HHHHHHHHhc-CCEEEEE
Confidence 5655555564 9999544
No 448
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=87.68 E-value=2 Score=37.13 Aligned_cols=103 Identities=13% Similarity=0.103 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEE--EEccC-
Q 025135 25 DQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGV--RMSPA- 101 (257)
Q Consensus 25 ~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~v--rls~~- 101 (257)
++-.+.|.+..++|.++|.|-.+. ...+.|++++++ |- |+.- -+.+.
T Consensus 106 ~~a~~~a~rl~kaGa~aVklEdg~----------------------------~~~~~i~~l~~~-GI-pv~gHlgltPq~ 155 (275)
T 3vav_A 106 ADAFASAVKLMRAGAQMVKFEGGE----------------------------WLAETVRFLVER-AV-PVCAHVGLTPQS 155 (275)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCG----------------------------GGHHHHHHHHHT-TC-CEEEEEESCGGG
T ss_pred HHHHHHHHHHHHcCCCEEEECCch----------------------------hHHHHHHHHHHC-CC-CEEEecCCCceE
Confidence 344566667777899999987552 245667777753 32 2221 12221
Q ss_pred ----CCCCCCC-CCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcE
Q 025135 102 ----IDHLDAT-DSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTF 176 (257)
Q Consensus 102 ----~~~~~~~-~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pv 176 (257)
.+|.-.+ .....++.++=++.++++| ++.|-+... + . ..++.|.+.+++|+
T Consensus 156 ~~~~gg~~vqgrt~~~a~~~i~rA~a~~eAG------A~~ivlE~v---------------p-~--~~a~~It~~l~iP~ 211 (275)
T 3vav_A 156 VHAFGGFKVQGKTEAGAAQLLRDARAVEEAG------AQLIVLEAV---------------P-T--LVAAEVTRELSIPT 211 (275)
T ss_dssp HHHHC---CCCCSHHHHHHHHHHHHHHHHHT------CSEEEEESC---------------C-H--HHHHHHHHHCSSCE
T ss_pred EeccCCeEEEcCCHHHHHHHHHHHHHHHHcC------CCEEEecCC---------------C-H--HHHHHHHHhCCCCE
Confidence 1221111 1112456677788999999 666654321 1 1 25678899999998
Q ss_pred EEeCC
Q 025135 177 ICSGG 181 (257)
Q Consensus 177 i~~G~ 181 (257)
|+-|.
T Consensus 212 igIGa 216 (275)
T 3vav_A 212 IGIGA 216 (275)
T ss_dssp EEESS
T ss_pred EEEcc
Confidence 87653
No 449
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=87.55 E-value=14 Score=32.44 Aligned_cols=162 Identities=12% Similarity=-0.004 Sum_probs=88.9
Q ss_pred HHHHHHHHcCCCEEEeccc-ccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCC
Q 025135 29 QAALNAIQAGFDGIEIHGA-HGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDA 107 (257)
Q Consensus 29 ~AA~~a~~aGfDgVEIh~a-~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~ 107 (257)
-.|+.+.++|||+|-+-++ .+. ...=-|.+. -=+++ -+.+.+++|.+.+.+-||.+.+-- +|.
T Consensus 50 ~sA~i~e~aGfdai~vs~~~~a~--~~lG~pD~~------~vt~~----em~~~~~~I~r~~~~~PviaD~d~--Gyg-- 113 (318)
T 1zlp_A 50 LSAAVVEKTGFHAAFVSGYSVSA--AMLGLPDFG------LLTTT----EVVEATRRITAAAPNLCVVVDGDT--GGG-- 113 (318)
T ss_dssp HHHHHHHHTTCSEEEECHHHHHH--HHHCCCSSS------CSCHH----HHHHHHHHHHHHSSSSEEEEECTT--CSS--
T ss_pred HHHHHHHHcCCCEEEECcHHHhh--HhcCCCCCC------CCCHH----HHHHHHHHHHhhccCCCEEEeCCC--CCC--
Confidence 4678888999999998652 321 001012211 11233 355666777777744488877652 231
Q ss_pred CCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcc-cCCCcCCCC-CCCchhHHHHHHHHHHHh-CCcEEEeCCCC-
Q 025135 108 TDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYT-AYGQTESGR-PGTEDEEAQLLRTWRRSY-QGTFICSGGFT- 183 (257)
Q Consensus 108 ~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~ir~~~-~~pvi~~G~it- 183 (257)
..+.+.+.++.|+++| +..|++...... ..+. ..+. ..+.......++.++++. ..+...+++-+
T Consensus 114 ----~~~~v~~tv~~l~~aG------aagv~iED~~~~k~cgH-~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARtda 182 (318)
T 1zlp_A 114 ----GPLNVQRFIRELISAG------AKGVFLEDQVWPKKCGH-MRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTDA 182 (318)
T ss_dssp ----SHHHHHHHHHHHHHTT------CCEEEEECBCSSCCCSS-SSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEECT
T ss_pred ----CHHHHHHHHHHHHHcC------CcEEEECCCCCCccccC-CCCCccCCHHHHHHHHHHHHHhcccCCcEEEEeeHH
Confidence 3567888899999999 888998654321 0000 0000 111112222333344443 23455555542
Q ss_pred ---------HHHHHHHHHcCCCcEEEechHHhhCchHHHHHHcCCC
Q 025135 184 ---------RELGIQALAEDGADLVAYGRLFISNPDLVLRFKLNAP 220 (257)
Q Consensus 184 ---------~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~g~~ 220 (257)
.+.+..+.+.| +|.|.+=- +.+++..+++.+..+
T Consensus 183 ~a~~gl~~ai~Ra~Ay~eAG-Ad~i~~e~--~~~~e~~~~i~~~l~ 225 (318)
T 1zlp_A 183 RAPHGLEEGIRRANLYKEAG-ADATFVEA--PANVDELKEVSAKTK 225 (318)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-CSEEEECC--CCSHHHHHHHHHHSC
T ss_pred hhhcCHHHHHHHHHHHHHcC-CCEEEEcC--CCCHHHHHHHHHhcC
Confidence 12344555666 99998842 467788888876543
No 450
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=87.31 E-value=2 Score=40.14 Aligned_cols=68 Identities=10% Similarity=0.113 Sum_probs=48.6
Q ss_pred HHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh-CCcEEEeCCCCHHHHHHHHHcC
Q 025135 116 GLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY-QGTFICSGGFTRELGIQALAED 194 (257)
Q Consensus 116 ~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~G~it~~~a~~~l~~g 194 (257)
..+.++.+.++| ++.|+++... + ......+.++.+++.+ ++||++.+-.+.++|..+++.|
T Consensus 256 ~~~~a~~~~~aG------~d~v~i~~~~----G--------~~~~~~~~i~~i~~~~~~~pvi~~~v~t~~~a~~l~~aG 317 (514)
T 1jcn_A 256 DKYRLDLLTQAG------VDVIVLDSSQ----G--------NSVYQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAG 317 (514)
T ss_dssp HHHHHHHHHHTT------CSEEEECCSC----C--------CSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHT
T ss_pred hHHHHHHHHHcC------CCEEEeeccC----C--------cchhHHHHHHHHHHhCCCCceEecccchHHHHHHHHHcC
Confidence 355677788899 8889885421 0 1223456788899988 7888763334899999999998
Q ss_pred CCcEEEec
Q 025135 195 GADLVAYG 202 (257)
Q Consensus 195 ~~D~V~ig 202 (257)
+|+|.+|
T Consensus 318 -ad~I~vg 324 (514)
T 1jcn_A 318 -VDGLRVG 324 (514)
T ss_dssp -CSEEEEC
T ss_pred -CCEEEEC
Confidence 9999664
No 451
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=87.28 E-value=5 Score=37.02 Aligned_cols=71 Identities=6% Similarity=-0.032 Sum_probs=47.8
Q ss_pred cHHHHHHHHHH-HHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhC-CcEEEeCCC--CHHHH
Q 025135 112 PLGLGLAVIQG-LNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQ-GTFICSGGF--TRELG 187 (257)
Q Consensus 112 ~~~~~~~l~~~-L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~G~i--t~~~a 187 (257)
+.+++.++.+. +++.+ +.||+ +|- ....+...+.+++.++ +||++-..+ +++++
T Consensus 280 t~~elid~y~~lle~yp------I~~IE--DPl--------------~~dD~eg~a~Lt~~lg~i~IvGDEl~vTn~~~i 337 (441)
T 3qtp_A 280 DVDGLIAEYVDYGKHYP------IASIE--DPF--------------AEDDWAAWNKFTVEHGNFQIVGDDLLVTNPARV 337 (441)
T ss_dssp CHHHHHHHHHHHHHHSC------EEEEE--SCS--------------CTTCHHHHHHHHHHTTTSEEEESTTTTTCHHHH
T ss_pred CHHHHHHHHHHHhhhcc------eeeec--CCC--------------ChHHHHHHHHHHHhcCCceEEeccccccCHHHH
Confidence 35666666554 67777 77776 551 2223455677888886 666554433 59999
Q ss_pred HHHHHcCCCcEEEechH
Q 025135 188 IQALAEDGADLVAYGRL 204 (257)
Q Consensus 188 ~~~l~~g~~D~V~igR~ 204 (257)
.++|+.+.||.|.+==.
T Consensus 338 ~~~Ie~~a~n~IlIKvn 354 (441)
T 3qtp_A 338 QMAMDKNACNSVLIKVN 354 (441)
T ss_dssp HHHHHHTCCSEEEECGG
T ss_pred HHHHHcCCCCEEEeccc
Confidence 99999999999987543
No 452
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=87.21 E-value=6.8 Score=33.82 Aligned_cols=88 Identities=15% Similarity=0.099 Sum_probs=53.5
Q ss_pred eEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCcee---EEEeeC--CCcccCCCcCCCCCCCch-hHHHHHH
Q 025135 93 RVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLT---YLHVTQ--PRYTAYGQTESGRPGTED-EEAQLLR 166 (257)
Q Consensus 93 ~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd---~i~v~~--~~~~~~~~~~~~~~~~~~-~~~~~~~ 166 (257)
++++-+.. ...+++.+.++.+++.| +| +|+++- |... .. ..+...+ ...+.++
T Consensus 95 p~~~~i~g----------~~~~~~~~~a~~~~~~g------~d~~~~iein~~~P~~~--g~---~~~g~~~~~~~~ii~ 153 (314)
T 2e6f_A 95 PLFLSISG----------LSVEENVAMVRRLAPVA------QEKGVLLELNLSCPNVP--GK---PQVAYDFEAMRTYLQ 153 (314)
T ss_dssp CEEEEECC----------SSHHHHHHHHHHHHHHH------HHHCCEEEEECCCCCST--TC---CCGGGSHHHHHHHHH
T ss_pred cEEEEeCC----------CCHHHHHHHHHHHHHhC------CCcCceEEEEcCCCCCC--Cc---hhhcCCHHHHHHHHH
Confidence 77777753 24788899999999999 88 887753 2221 10 0011111 2245677
Q ss_pred HHHHHhCCcEEE--eCCCCHHHH---HHHHHcCC-CcEEEe
Q 025135 167 TWRRSYQGTFIC--SGGFTRELG---IQALAEDG-ADLVAY 201 (257)
Q Consensus 167 ~ir~~~~~pvi~--~G~it~~~a---~~~l~~g~-~D~V~i 201 (257)
.+|+.+++||++ ..+++.++. .+.+++-+ +|+|.+
T Consensus 154 ~vr~~~~~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v 194 (314)
T 2e6f_A 154 QVSLAYGLPFGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTC 194 (314)
T ss_dssp HHHHHHCSCEEEEECCCCCHHHHHHHHHHHHTCTTEEEEEE
T ss_pred HHHHhcCCCEEEEECCCCCHHHHHHHHHHHHhcCCceEEEE
Confidence 888888899765 344566553 33344555 998864
No 453
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=87.08 E-value=4.8 Score=33.68 Aligned_cols=136 Identities=16% Similarity=0.092 Sum_probs=71.3
Q ss_pred CChhhHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeE
Q 025135 15 LQTSEIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRV 94 (257)
Q Consensus 15 lt~~eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v 94 (257)
-|.+|++.+.++ ++.++++|+|||-+-+ |.+. ..-| ...+.+++ +++++-+
T Consensus 70 Ys~~E~~~M~~D----i~~~~~~GadGvV~G~---------Lt~d--g~iD---------~~~~~~Li----~~a~~~~- 120 (224)
T 2bdq_A 70 YNDLELRIMEED----ILRAVELESDALVLGI---------LTSN--NHID---------TEAIEQLL----PATQGLP- 120 (224)
T ss_dssp CCHHHHHHHHHH----HHHHHHTTCSEEEECC---------BCTT--SSBC---------HHHHHHHH----HHHTTCC-
T ss_pred CCHHHHHHHHHH----HHHHHHcCCCEEEEee---------ECCC--CCcC---------HHHHHHHH----HHhCCCe-
Confidence 378888877665 4567789999999632 2221 1122 12233333 3444323
Q ss_pred EEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh-C
Q 025135 95 GVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY-Q 173 (257)
Q Consensus 95 ~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~-~ 173 (257)
+-++. .|+.....++ .+-.+.|.+.| ++-|=.+...-.. .-......++++.+.. +
T Consensus 121 -vTFHR--AFD~~~~~d~----~~ale~L~~lG------v~rILTSG~~~~~----------~a~~g~~~L~~Lv~~a~~ 177 (224)
T 2bdq_A 121 -LVFHM--AFDVIPKSDQ----KKSIDQLVALG------FTRILLHGSSNGE----------PIIENIKHIKALVEYANN 177 (224)
T ss_dssp -EEECG--GGGGSCTTTH----HHHHHHHHHTT------CCEEEECSCSSCC----------CGGGGHHHHHHHHHHHTT
T ss_pred -EEEEC--chhccCCcCH----HHHHHHHHHcC------CCEEECCCCCCCC----------cHHHHHHHHHHHHHhhCC
Confidence 33332 2222211122 23467788889 6655443321110 0112234444443333 2
Q ss_pred -CcEEEeCCCCHHHHHHHHHcCCCcEEEec
Q 025135 174 -GTFICSGGFTRELGIQALAEDGADLVAYG 202 (257)
Q Consensus 174 -~pvi~~G~it~~~a~~~l~~g~~D~V~ig 202 (257)
+-|+.+||++++.+.++++..+++-+=..
T Consensus 178 ri~Im~GgGV~~~Ni~~l~~~tGv~e~H~s 207 (224)
T 2bdq_A 178 RIEIMVGGGVTAENYQYICQETGVKQAHGT 207 (224)
T ss_dssp SSEEEECSSCCTTTHHHHHHHHTCCEEEET
T ss_pred CeEEEeCCCCCHHHHHHHHHhhCCCEEccc
Confidence 44777788999999999876567777653
No 454
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=87.06 E-value=6.8 Score=34.30 Aligned_cols=74 Identities=14% Similarity=0.096 Sum_probs=48.8
Q ss_pred cHHHHHHHHHHHHhcCCccCCcee----EEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCC-C--CH
Q 025135 112 PLGLGLAVIQGLNKLQIDQGAKLT----YLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGG-F--TR 184 (257)
Q Consensus 112 ~~~~~~~l~~~L~~~G~~~~~~vd----~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~-i--t~ 184 (257)
+.+.....++...++| .| ++.+.- + +.++++.+...+||+..|| - +.
T Consensus 198 dp~~Va~aaRiAaELG------ADs~~tivK~~y---------------~-----e~f~~Vv~a~~vPVViaGG~k~~~~ 251 (307)
T 3fok_A 198 STDAVIQSVAIAAGLG------NDSSYTWMKLPV---------------V-----EEMERVMESTTMPTLLLGGEGGNDP 251 (307)
T ss_dssp SHHHHHHHHHHHHTCS------SCCSSEEEEEEC---------------C-----TTHHHHGGGCSSCEEEECCSCC--C
T ss_pred CHHHHHHHHHHHHHhC------CCcCCCEEEeCC---------------c-----HHHHHHHHhCCCCEEEeCCCCCCCH
Confidence 4566677788888999 77 776521 1 1235566777899666655 3 33
Q ss_pred H----HHHHHHHcCCCcEEEechHHhh--CchH
Q 025135 185 E----LGIQALAEDGADLVAYGRLFIS--NPDL 211 (257)
Q Consensus 185 ~----~a~~~l~~g~~D~V~igR~~ia--dP~l 211 (257)
+ ..+++++-.++..|.+||-... ++|-
T Consensus 252 ~e~L~~v~~A~~~aGa~Gv~vGRNIfQ~~~~dp 284 (307)
T 3fok_A 252 DATFASWEHALTLPGVRGLTVGRTLLYPQDGDV 284 (307)
T ss_dssp HHHHHHHHHHTTSTTEEEEEECTTTSSCSSSCH
T ss_pred HHHHHHHHHHHHhCCCeEEeechhhccCCCCCH
Confidence 3 4566777234999999999998 5543
No 455
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=86.94 E-value=10 Score=32.09 Aligned_cols=83 Identities=11% Similarity=0.060 Sum_probs=49.7
Q ss_pred cHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcC----------CCCCCCchhHHHHHHHHHHHh-CCcEEEeC
Q 025135 112 PLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTE----------SGRPGTEDEEAQLLRTWRRSY-QGTFICSG 180 (257)
Q Consensus 112 ~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~ir~~~-~~pvi~~G 180 (257)
+.+.+.++++.|++.| +|.|++--|.-+...... ..+. ........++.+|+.+ ++|+++-+
T Consensus 29 ~~~~~~~~~~~l~~~G------~D~IElG~P~sdP~adgp~i~~a~~~al~~G~-~~~~~~~~v~~ir~~~~~~Pi~~m~ 101 (262)
T 2ekc_A 29 DYETSLKAFKEVLKNG------TDILEIGFPFSDPVADGPTIQVAHEVALKNGI-RFEDVLELSETLRKEFPDIPFLLMT 101 (262)
T ss_dssp CHHHHHHHHHHHHHTT------CSEEEEECCCSCCTTSCHHHHHHHHHHHHTTC-CHHHHHHHHHHHHHHCTTSCEEEEC
T ss_pred ChHHHHHHHHHHHHcC------CCEEEECCCCCCcccccHHHHHHHHHHHHcCC-CHHHHHHHHHHHHhhcCCCCEEEEe
Confidence 3678899999999999 999998654321110000 0000 0001124467788888 89988765
Q ss_pred CCCH-------HHHHHHHHcCCCcEEEec
Q 025135 181 GFTR-------ELGIQALAEDGADLVAYG 202 (257)
Q Consensus 181 ~it~-------~~a~~~l~~g~~D~V~ig 202 (257)
-+++ ..++.+.+.| +|.|.+.
T Consensus 102 y~n~v~~~g~~~f~~~~~~aG-~dgvii~ 129 (262)
T 2ekc_A 102 YYNPIFRIGLEKFCRLSREKG-IDGFIVP 129 (262)
T ss_dssp CHHHHHHHCHHHHHHHHHHTT-CCEEECT
T ss_pred cCcHHHHhhHHHHHHHHHHcC-CCEEEEC
Confidence 4442 3345566665 9988875
No 456
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=86.89 E-value=5.7 Score=35.92 Aligned_cols=39 Identities=10% Similarity=0.041 Sum_probs=30.9
Q ss_pred HHHHHHHHHHhCCcEEEeCCCCHHHHHHHHHcCCCcEEEe
Q 025135 162 AQLLRTWRRSYQGTFICSGGFTRELGIQALAEDGADLVAY 201 (257)
Q Consensus 162 ~~~~~~ir~~~~~pvi~~G~it~~~a~~~l~~g~~D~V~i 201 (257)
+..++.+++.+++||++-|-.++++|..+.+.| +|+|.+
T Consensus 241 ~~~i~~lr~~~~~PvivKgv~~~e~A~~a~~aG-ad~I~v 279 (392)
T 2nzl_A 241 WEDIKWLRRLTSLPIVAKGILRGDDAREAVKHG-LNGILV 279 (392)
T ss_dssp HHHHHHHC--CCSCEEEEEECCHHHHHHHHHTT-CCEEEE
T ss_pred HHHHHHHHHhhCCCEEEEecCCHHHHHHHHHcC-CCEEEe
Confidence 445778888889998886656999999999887 999988
No 457
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=86.83 E-value=15 Score=32.84 Aligned_cols=130 Identities=10% Similarity=-0.019 Sum_probs=76.6
Q ss_pred HHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCCCCCcHH
Q 025135 35 IQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDATDSDPLG 114 (257)
Q Consensus 35 ~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~~~~~ 114 (257)
+.+|.|.|-|..+---+ ++....+-+.+.-.+.+.++++..|+. |. -+.+++... ...+.+
T Consensus 97 ~~ag~~~v~if~~~Sd~----------h~~~~l~~s~~e~l~~~~~~v~~a~~~-g~---~v~~~~ed~-----~r~~~~ 157 (370)
T 3rmj_A 97 APAPKKRIHTFIATSPI----------HMEYKLKMKPKQVIEAAVKAVKIAREY-TD---DVEFSCEDA-----LRSEID 157 (370)
T ss_dssp TTSSSEEEEEEEECSHH----------HHHHTTCCCHHHHHHHHHHHHHHHTTT-CS---CEEEEEETG-----GGSCHH
T ss_pred hhCCCCEEEEEecCcHH----------HHHHHhCCCHHHHHHHHHHHHHHHHHc-CC---EEEEecCCC-----CccCHH
Confidence 45899988887765211 222344555565555666666666654 22 234443211 113578
Q ss_pred HHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhC----CcEEEeCCC-C----HH
Q 025135 115 LGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQ----GTFICSGGF-T----RE 185 (257)
Q Consensus 115 ~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~----~pvi~~G~i-t----~~ 185 (257)
...++++.+.++| ++.|.+.... + ...+......++.+++.++ +|| ..... | ..
T Consensus 158 ~~~~~~~~~~~~G------a~~i~l~DT~----G------~~~P~~~~~lv~~l~~~~~~~~~~~l-~~H~Hnd~GlAvA 220 (370)
T 3rmj_A 158 FLAEICGAVIEAG------ATTINIPDTV----G------YSIPYKTEEFFRELIAKTPNGGKVVW-SAHCHNDLGLAVA 220 (370)
T ss_dssp HHHHHHHHHHHHT------CCEEEEECSS----S------CCCHHHHHHHHHHHHHHSTTGGGSEE-EEECBCTTSCHHH
T ss_pred HHHHHHHHHHHcC------CCEEEecCcc----C------CcCHHHHHHHHHHHHHhCCCcCceEE-EEEeCCCCChHHH
Confidence 8899999999999 7777765421 1 1123344566778888876 343 33333 3 55
Q ss_pred HHHHHHHcCCCcEEEe
Q 025135 186 LGIQALAEDGADLVAY 201 (257)
Q Consensus 186 ~a~~~l~~g~~D~V~i 201 (257)
.+..+++.| |+.|-.
T Consensus 221 N~laAv~aG-a~~vd~ 235 (370)
T 3rmj_A 221 NSLAALKGG-ARQVEC 235 (370)
T ss_dssp HHHHHHHTT-CCEEEE
T ss_pred HHHHHHHhC-CCEEEE
Confidence 677888887 777744
No 458
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=86.80 E-value=14 Score=31.73 Aligned_cols=103 Identities=11% Similarity=-0.018 Sum_probs=60.8
Q ss_pred CChhhHHHHHHH----------HHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHH
Q 025135 15 LQTSEIPEVIDQ----------YRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVRE 84 (257)
Q Consensus 15 lt~~eI~~ii~~----------f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~a 84 (257)
+|...+.+..+. =.-.|+.+.++|||.|-+ +.. |-.-.+ -..|.-.-+ +.-+...+++
T Consensus 4 ~t~~~lr~~k~~g~~i~~~tayDa~sA~l~e~aG~d~ilv-GdS--l~~~~l-----G~~dt~~vT----ldemi~h~~a 71 (275)
T 1o66_A 4 ITVNTLQKMKAAGEKIAMLTAYESSFAALMDDAGVEMLLV-GDS--LGMAVQ-----GRKSTLPVS----LRDMCYHTEC 71 (275)
T ss_dssp CCHHHHHHHHHHTCCEEEEECCSHHHHHHHHHTTCCEEEE-CTT--HHHHTT-----CCSSSTTCC----HHHHHHHHHH
T ss_pred cCHHHHHHHHhCCCcEEEEeCcCHHHHHHHHHcCCCEEEE-CHH--HHHHHc-----CCCCCCCCC----HHHHHHHHHH
Confidence 566777766653 246788899999999954 211 111110 011111112 2346666788
Q ss_pred HHHHhCCCeEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeC
Q 025135 85 VIVAIGADRVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQ 141 (257)
Q Consensus 85 iR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~ 141 (257)
|++.+..-+|.+.+. +..|. .+.+.+.+-+.+|.+.| ++.|++..
T Consensus 72 V~r~~~~~~vvaD~p-fgsy~-----~s~~~a~~na~rl~kaG------a~aVklEd 116 (275)
T 1o66_A 72 VARGAKNAMIVSDLP-FGAYQ-----QSKEQAFAAAAELMAAG------AHMVKLEG 116 (275)
T ss_dssp HHHHCSSSEEEEECC-TTSSS-----SCHHHHHHHHHHHHHTT------CSEEEEEC
T ss_pred HHhhCCCCeEEEECC-CCCcc-----CCHHHHHHHHHHHHHcC------CcEEEECC
Confidence 888776435666654 21221 34677888888888899 88888865
No 459
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=86.74 E-value=2.9 Score=37.60 Aligned_cols=40 Identities=15% Similarity=0.052 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHhCCcEEEeCC---CCHHHHHHHHHcCCCcEEEe
Q 025135 161 EAQLLRTWRRSYQGTFICSGG---FTRELGIQALAEDGADLVAY 201 (257)
Q Consensus 161 ~~~~~~~ir~~~~~pvi~~G~---it~~~a~~~l~~g~~D~V~i 201 (257)
+.+.++.+++.+++||++-+- .++++|+.+.+.| +|+|.+
T Consensus 194 ~~~~I~~l~~~~~~PVivK~vg~g~s~e~A~~l~~aG-ad~I~V 236 (365)
T 3sr7_A 194 WKKHLSDYAKKLQLPFILKEVGFGMDVKTIQTAIDLG-VKTVDI 236 (365)
T ss_dssp HHHHHHHHHHHCCSCEEEEECSSCCCHHHHHHHHHHT-CCEEEC
T ss_pred HHHHHHHHHHhhCCCEEEEECCCCCCHHHHHHHHHcC-CCEEEE
Confidence 446788899999999887643 5899999999988 999987
No 460
>1ynp_A Oxidoreductase, AKR11C1; aldo-keto reductase, NADPH; HET: SUC; 1.25A {Bacillus halodurans} PDB: 1ynq_A*
Probab=86.70 E-value=15 Score=31.83 Aligned_cols=139 Identities=12% Similarity=0.115 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCC-CchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCC
Q 025135 25 DQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYG-GSIENRCRFLMQLVREVIVAIGADRVGVRMSPAID 103 (257)
Q Consensus 25 ~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yG-Gs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~ 103 (257)
++..++...|.++|+..|+- |. .|| |.-| +++-+.++.-|+. -.|.-|+.....
T Consensus 48 ~~~~~~l~~Al~~Gi~~~DT--A~-----------------~Yg~G~sE---~~lG~al~~~R~~---v~I~TK~~~~~~ 102 (317)
T 1ynp_A 48 TKARRIMDEVLELGINYLDT--AD-----------------LYNQGLNE---QFVGKALKGRRQD---IILATKVGNRFE 102 (317)
T ss_dssp HHHHHHHHHHHHTTCCEEEC--SC-----------------BTTBCCCH---HHHHHHHTTCGGG---CEEEEEC-----
T ss_pred HHHHHHHHHHHHcCCCeEEC--cc-----------------ccCCCchH---HHHHHHHhcCCCe---EEEEeeeCCCcC
Confidence 34455666778999998882 22 344 3323 2333434332221 157778753210
Q ss_pred CCC---CCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeC
Q 025135 104 HLD---ATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSG 180 (257)
Q Consensus 104 ~~~---~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G 180 (257)
... ............+-+.|+.+|.+. +|.+-+|.|.... .....+..+.++++.-.+.-|++.
T Consensus 103 ~~~~~~~~~~~~~~v~~~~e~SL~rL~~dy---iDl~llH~p~~~~----------~~~e~~~al~~l~~~Gkir~iGvS 169 (317)
T 1ynp_A 103 QGKEGWWWDPSKAYIKEAVKDSLRRLQTDY---IDLYQLHGGTIDD----------PIDETIEAFEELKQEGVIRYYGIS 169 (317)
T ss_dssp ----------CHHHHHHHHHHHHHHHTCSC---EEEEEECSCCTTS----------CHHHHHHHHHHHHHHTSEEEEEEE
T ss_pred CCCccccCCCCHHHHHHHHHHHHHHHCCCc---EeEEEecCCCCCC----------ChHHHHHHHHHHHhCCceEEEEec
Confidence 000 000112222344667788888321 4444455542210 112344566677777667778888
Q ss_pred CCCHHHHHHHHHcCCCcEEEe
Q 025135 181 GFTRELGIQALAEDGADLVAY 201 (257)
Q Consensus 181 ~it~~~a~~~l~~g~~D~V~i 201 (257)
.++++..+++++...++.+++
T Consensus 170 n~~~~~l~~~~~~~~~~~~Q~ 190 (317)
T 1ynp_A 170 SIRPNVIKEYLKRSNIVSIMM 190 (317)
T ss_dssp CCCHHHHHHHHHHSCCCEEEE
T ss_pred CCCHHHHHHHHhcCCCEEEec
Confidence 889999999998887888876
No 461
>3krs_A Triosephosphate isomerase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, I structural genomics; 1.55A {Cryptosporidium parvum iowa II}
Probab=86.69 E-value=1.5 Score=37.97 Aligned_cols=43 Identities=14% Similarity=0.107 Sum_probs=37.5
Q ss_pred CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCchHHHHHH
Q 025135 173 QGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNPDLVLRFK 216 (257)
Q Consensus 173 ~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~ 216 (257)
+++|+.+|+++++.+.+++..-.+|.+.+|++.+. |+|..-+.
T Consensus 226 ~vrILYGGSV~~~N~~el~~~~diDG~LVGgASL~-~~F~~Ii~ 268 (271)
T 3krs_A 226 NLRIIYGGSVTPDNCNELIKCADIDGFLVGGASLK-PTFAKIIE 268 (271)
T ss_dssp HCCEEECSCCCTTTHHHHHHSTTCCEEEESGGGGS-TTHHHHHH
T ss_pred CccEEEcCCcCHHHHHHHhcCCCCCEEEeeHHhhh-HHHHHHHH
Confidence 36898989999999999999999999999999998 78876543
No 462
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=86.69 E-value=5.7 Score=32.58 Aligned_cols=128 Identities=10% Similarity=-0.037 Sum_probs=0.0
Q ss_pred CCCCChhhHHHHHHH---------------HHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhh
Q 025135 12 PQALQTSEIPEVIDQ---------------YRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCR 76 (257)
Q Consensus 12 p~~lt~~eI~~ii~~---------------f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r 76 (257)
||..|.++..+|+.. ..+....+.+.+.|.|+||+..
T Consensus 34 pR~V~~~~a~~i~~~~~~~~~~VgVfvn~~~~~i~~~~~~~~ld~vQLHG~e---------------------------- 85 (203)
T 1v5x_A 34 RRRIAPEAARAIGEALGPFVVRVGVFRDQPPEEVLRLMEEARLQVAQLHGEE---------------------------- 85 (203)
T ss_dssp TTBCCHHHHHHHHHHSCSSSEEEEEESSCCHHHHHHHHHHTTCSEEEECSCC----------------------------
T ss_pred CCcCCHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHhhCCCEEEECCCC----------------------------
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCC
Q 025135 77 FLMQLVREVIVAIGADRVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPG 156 (257)
Q Consensus 77 ~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~ 156 (257)
..+-++.++. .-++.-.++.....+ + .+.+.. +|++-+.... .-.
T Consensus 86 -~~~~~~~l~~---~~~vika~~v~~~~~-------------l--~~~~~~------~d~~LlD~~~--gGt-------- 130 (203)
T 1v5x_A 86 -PPEWAEAVGR---FYPVIKAFPLEGPAR-------------P--EWADYP------AQALLLDGKR--PGS-------- 130 (203)
T ss_dssp -CHHHHHHHTT---TSCEEEEEECSSSCC-------------G--GGGGSS------CSEEEEECSS--TTS--------
T ss_pred -CHHHHHHhcc---CCCEEEEEEcCChHh-------------h--hhhhcC------CCEEEEcCCC--CCC--------
Q ss_pred CchhHHHHHHH-HHHHhCCcEEEeCCCCHHHHHHHHHcCCCcEEEechHH
Q 025135 157 TEDEEAQLLRT-WRRSYQGTFICSGGFTRELGIQALAEDGADLVAYGRLF 205 (257)
Q Consensus 157 ~~~~~~~~~~~-ir~~~~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~ 205 (257)
+....|..+.. + ..+.|+++.||++++...++| .-.++.|-+..++
T Consensus 131 G~~fdW~~l~~~~--~~~~p~~LAGGL~peNV~~ai-~~~p~gVDvsSGv 177 (203)
T 1v5x_A 131 GEAYPRAWAKPLL--ATGRRVILAGGIAPENLEEVL-ALRPYALDLASGV 177 (203)
T ss_dssp CCCCCGGGGHHHH--HTTSCEEECSSCCSTTHHHHH-HHCCSEEEESGGG
T ss_pred CCccCHHHHHhhh--ccCCcEEEECCCCHHHHHHHH-hcCCCEEEeCCce
No 463
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=86.33 E-value=2.4 Score=37.04 Aligned_cols=79 Identities=10% Similarity=0.030 Sum_probs=50.9
Q ss_pred HHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHH-------------HHHHHh--CCC
Q 025135 28 RQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVR-------------EVIVAI--GAD 92 (257)
Q Consensus 28 ~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~-------------aiR~~v--g~~ 92 (257)
.+|++.|.+||.|.|.-.-|. ..||......+++++.++ .|++.- |+
T Consensus 169 ~~A~~ia~~AGADFVKTSTGf-----------------~~~gAT~edV~lM~~~v~~~~~~~~~~~~~~~~~~~~~tg~- 230 (297)
T 4eiv_A 169 SRAAVAALEGGADFLQTSSGL-----------------GATHATMFTVHLISIALREYMVRENERIRVEGINREGAAVR- 230 (297)
T ss_dssp HHHHHHHHHHTCSEEECCCSS-----------------SSCCCCHHHHHHHHHHHHHHHCC-------------------
T ss_pred HHHHHHHHHhCCCEEEcCCCC-----------------CCCCCCHHHHHHHHHHHHHHhccccccccccccccccccCC-
Confidence 477888999999999965554 234544445666666664 223321 33
Q ss_pred eEEEEEc-cCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEE
Q 025135 93 RVGVRMS-PAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLH 138 (257)
Q Consensus 93 ~v~vrls-~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~ 138 (257)
.++||.+ .. -.+.+++..+.+...++| -+|++
T Consensus 231 ~vgvKAs~GG--------Irt~e~A~~~i~~~~elG------~~wl~ 263 (297)
T 4eiv_A 231 CIGIKIEVGD--------VHMAETADFLMQMIFENG------PRSIV 263 (297)
T ss_dssp CCEEEEECTT--------CCHHHHHHHHHHHHHHHC------GGGCS
T ss_pred ceeEEecCCC--------CCCHHHHHHHHHHHHHhC------ccccC
Confidence 6899998 42 246888888888888788 67763
No 464
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=86.25 E-value=12 Score=32.19 Aligned_cols=88 Identities=10% Similarity=0.069 Sum_probs=52.7
Q ss_pred eEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCcee-EEEeeC--CCcccCCCcCCCCCCCch-hHHHHHHHH
Q 025135 93 RVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLT-YLHVTQ--PRYTAYGQTESGRPGTED-EEAQLLRTW 168 (257)
Q Consensus 93 ~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd-~i~v~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~i 168 (257)
++++-+.. ...+++.+.++.+++.| +| +|+++- |... . .. .++..+ ...+.++.+
T Consensus 95 p~~~~i~g----------~~~~~~~~~a~~~~~~g------~d~~iein~~~P~~~--g--~~-~~g~~~e~~~~iv~~v 153 (311)
T 1jub_A 95 PIFFSIAG----------MSAAENIAMLKKIQESD------FSGITELNLSCPNVP--G--EP-QLAYDFEATEKLLKEV 153 (311)
T ss_dssp CCEEEECC----------SSHHHHHHHHHHHHHSC------CCSEEEEESCCCCSS--S--CC-CGGGCHHHHHHHHHHH
T ss_pred CEEEEcCC----------CCHHHHHHHHHHHHhcC------CCeEEEEeccCCCCC--C--cc-cccCCHHHHHHHHHHH
Confidence 67776653 35788899999999999 88 877653 2221 1 00 011111 224566778
Q ss_pred HHHhCCcEEE--eCCCCHHHH---HHHHHcCCCcEEEe
Q 025135 169 RRSYQGTFIC--SGGFTRELG---IQALAEDGADLVAY 201 (257)
Q Consensus 169 r~~~~~pvi~--~G~it~~~a---~~~l~~g~~D~V~i 201 (257)
|+.+++||++ ..+++.++. .+.+++-++|+|.+
T Consensus 154 r~~~~~Pv~vKi~~~~~~~~~~~~a~~~~~~G~d~i~v 191 (311)
T 1jub_A 154 FTFFTKPLGVKLPPYFDLVHFDIMAEILNQFPLTYVNS 191 (311)
T ss_dssp TTTCCSCEEEEECCCCSHHHHHHHHHHHTTSCCCEEEE
T ss_pred HHhcCCCEEEEECCCCCHHHHHHHHHHHHHcCCcEEEe
Confidence 8878889765 344565443 34444445998765
No 465
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=85.82 E-value=1.3 Score=36.66 Aligned_cols=119 Identities=15% Similarity=0.061 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCCC
Q 025135 26 QYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAIDH 104 (257)
Q Consensus 26 ~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~~ 104 (257)
.+.+.++.+.++|.|.|++-..-| .|. | |. ++..++++++|+.++.. .+.+.++
T Consensus 24 ~~~~~i~~~~~~G~d~i~l~~~dg----~f~-~--~~-------------~~~~~~i~~l~~~~~~~~~v~l~vn----- 78 (230)
T 1rpx_A 24 KLGEQVKAIEQAGCDWIHVDVMDG----RFV-P--NI-------------TIGPLVVDSLRPITDLPLDVHLMIV----- 78 (230)
T ss_dssp GHHHHHHHHHHTTCCCEEEEEEBS----SSS-S--CB-------------CCCHHHHHHHGGGCCSCEEEEEESS-----
T ss_pred HHHHHHHHHHHCCCCEEEEeeccC----Ccc-c--cc-------------ccCHHHHHHHHhccCCcEEEEEEec-----
Confidence 445666777889999999864332 121 1 11 12247888899887432 3444443
Q ss_pred CCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-C
Q 025135 105 LDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-T 183 (257)
Q Consensus 105 ~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t 183 (257)
+.+ +.++.+.++| +|++++|..... . ......++.+++. +..++..-.- |
T Consensus 79 -------d~~---~~v~~~~~~G------ad~v~vh~~~~~-----------~-~~~~~~~~~~~~~-g~~ig~~~~p~t 129 (230)
T 1rpx_A 79 -------EPD---QRVPDFIKAG------ADIVSVHCEQSS-----------T-IHLHRTINQIKSL-GAKAGVVLNPGT 129 (230)
T ss_dssp -------SHH---HHHHHHHHTT------CSEEEEECSTTT-----------C-SCHHHHHHHHHHT-TSEEEEEECTTC
T ss_pred -------CHH---HHHHHHHHcC------CCEEEEEecCcc-----------c-hhHHHHHHHHHHc-CCcEEEEeCCCC
Confidence 122 3556667789 899988752000 0 1112345555553 4444333222 4
Q ss_pred HHHHHHHHHcCCCcEE
Q 025135 184 RELGIQALAEDGADLV 199 (257)
Q Consensus 184 ~~~a~~~l~~g~~D~V 199 (257)
+.+..+.+..+ +|+|
T Consensus 130 ~~e~~~~~~~~-~d~v 144 (230)
T 1rpx_A 130 PLTAIEYVLDA-VDLV 144 (230)
T ss_dssp CGGGGTTTTTT-CSEE
T ss_pred CHHHHHHHHhh-CCEE
Confidence 44444444444 8999
No 466
>1o5x_A TIM, triosephosphate isomerase; 2- phosphoglycerate, META-phosphate, catalytic LOOP6; HET: 2PG; 1.10A {Plasmodium falciparum} SCOP: c.1.1.1 PDB: 1lzo_A 1m7o_A* 1m7p_A* 1lyx_A* 1ydv_A 2vfi_A* 3psw_A 3psv_A 3pwa_A 2vfh_A* 2vff_A 2vfg_A* 1vga_A 1woa_A* 1wob_A 3pvf_A 3py2_A 2vfd_A 2vfe_A*
Probab=85.62 E-value=1.5 Score=37.37 Aligned_cols=43 Identities=16% Similarity=0.144 Sum_probs=37.4
Q ss_pred CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCchHHHHHH
Q 025135 173 QGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNPDLVLRFK 216 (257)
Q Consensus 173 ~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~ 216 (257)
+++|+.+|+++++++.+++..-.+|.+.+|++.+. .+|..-+.
T Consensus 203 ~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~-~~F~~ii~ 245 (248)
T 1o5x_A 203 QIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLK-ESFVDIIK 245 (248)
T ss_dssp HSEEEECSCCCTTTHHHHHTSTTCCEEEECGGGGS-TTHHHHHH
T ss_pred cceEEEcCCCCHHHHHHHHcCCCCCeeEeeHHHHH-HHHHHHHH
Confidence 36788888999999999999888999999999999 88876553
No 467
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=85.61 E-value=2.1 Score=39.62 Aligned_cols=66 Identities=17% Similarity=0.208 Sum_probs=48.0
Q ss_pred HHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHh-CCcEEEeCCC-CHHHHHHHHHcC
Q 025135 117 LAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSY-QGTFICSGGF-TRELGIQALAED 194 (257)
Q Consensus 117 ~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~G~i-t~~~a~~~l~~g 194 (257)
.+.++.+.++| +|.+.+... . + .....+..+..+++.+ ++||+ .|++ +.+.+..+++.|
T Consensus 235 ~~~a~~l~~~G------~d~ivi~~a-~---g--------~~~~~~~~i~~l~~~~p~~pvi-~G~v~t~~~a~~~~~~G 295 (491)
T 1zfj_A 235 FERAEALFEAG------ADAIVIDTA-H---G--------HSAGVLRKIAEIRAHFPNRTLI-AGNIATAEGARALYDAG 295 (491)
T ss_dssp HHHHHHHHHHT------CSEEEECCS-C---T--------TCHHHHHHHHHHHHHCSSSCEE-EEEECSHHHHHHHHHTT
T ss_pred HHHHHHHHHcC------CCeEEEeee-c---C--------cchhHHHHHHHHHHHCCCCcEe-CCCccCHHHHHHHHHcC
Confidence 45677888889 787776531 1 0 1223456778888888 78988 5666 999999999988
Q ss_pred CCcEEEec
Q 025135 195 GADLVAYG 202 (257)
Q Consensus 195 ~~D~V~ig 202 (257)
+|.|.+|
T Consensus 296 -ad~I~vg 302 (491)
T 1zfj_A 296 -VDVVKVG 302 (491)
T ss_dssp -CSEEEEC
T ss_pred -CCEEEEC
Confidence 9999776
No 468
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=85.48 E-value=17 Score=31.45 Aligned_cols=160 Identities=12% Similarity=0.069 Sum_probs=81.0
Q ss_pred HHHHHHHHHcCCCEEEecc-cccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCC
Q 025135 28 RQAALNAIQAGFDGIEIHG-AHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLD 106 (257)
Q Consensus 28 ~~AA~~a~~aGfDgVEIh~-a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~ 106 (257)
.-.|+.+.++|||+|-+-+ +.+..+ -..|.-.=++ .-+.+.+++|.+.+.. ||.+.+-- +|.
T Consensus 29 ~~sA~~~~~aG~~ai~vsg~~~a~~l---------G~pD~~~vt~----~em~~~~~~I~~~~~~-PviaD~d~--Gyg- 91 (295)
T 1s2w_A 29 GLSARIVQEAGFKGIWGSGLSVSAQL---------GVRDSNEASW----TQVVEVLEFMSDASDV-PILLDADT--GYG- 91 (295)
T ss_dssp HHHHHHHHHHTCSCEEECCHHHHHTC------------------C----HHHHHHHHHHHHTCSS-CEEEECCS--SCS-
T ss_pred HHHHHHHHHcCCCEEEeChHHHHHhC---------CCCCCCCCCH----HHHHHHHHHHHhcCCC-CEEecCCC--CCC-
Confidence 3467888899999999874 232110 0112100122 2345556666666643 77776642 231
Q ss_pred CCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcc-cCCCcCCCCCCCchhHHHHHHHHHH---Hh-CCcEEEeCC
Q 025135 107 ATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYT-AYGQTESGRPGTEDEEAQLLRTWRR---SY-QGTFICSGG 181 (257)
Q Consensus 107 ~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ir~---~~-~~pvi~~G~ 181 (257)
+ .+.+.+.++.++++| +..|++...... ..+.. .+....-.+..+.+.+|+. +. ......+++
T Consensus 92 ----~-~~~v~~~v~~l~~aG------aagv~iED~~~~k~cgH~-gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aR 159 (295)
T 1s2w_A 92 ----N-FNNARRLVRKLEDRG------VAGACLEDKLFPKTNSLH-DGRAQPLADIEEFALKIKACKDSQTDPDFCIVAR 159 (295)
T ss_dssp ----S-HHHHHHHHHHHHHTT------CCEEEEECBCC---------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEE
T ss_pred ----C-HHHHHHHHHHHHHcC------CcEEEECCCCCCcccccc-CCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEe
Confidence 2 466788899999999 888998654211 00000 0000000112233444443 32 233444443
Q ss_pred C-C----------HHHHHHHHHcCCCcEEEechHHhhCchHHHHHHcC
Q 025135 182 F-T----------RELGIQALAEDGADLVAYGRLFISNPDLVLRFKLN 218 (257)
Q Consensus 182 i-t----------~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~g 218 (257)
- . .+.+..+.+.| +|.|.+=- .+.+++..+++.+.
T Consensus 160 tda~~a~~g~~~ai~Ra~ay~eAG-Ad~i~~e~-~~~~~~~~~~i~~~ 205 (295)
T 1s2w_A 160 VEAFIAGWGLDEALKRAEAYRNAG-ADAILMHS-KKADPSDIEAFMKA 205 (295)
T ss_dssp ECTTTTTCCHHHHHHHHHHHHHTT-CSEEEECC-CSSSSHHHHHHHHH
T ss_pred ehHHhccccHHHHHHHHHHHHHcC-CCEEEEcC-CCCCHHHHHHHHHH
Confidence 2 1 23455666666 99998831 23466777766653
No 469
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=85.36 E-value=2.4 Score=35.11 Aligned_cols=120 Identities=14% Similarity=0.088 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEE--EEEccCCC
Q 025135 26 QYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVG--VRMSPAID 103 (257)
Q Consensus 26 ~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~--vrls~~~~ 103 (257)
.+.+.++.+.++|.|.|++-.--|- |. | | ..+..++++++|+.+. .++. +.++
T Consensus 20 ~l~~~i~~~~~~Gad~i~l~i~Dg~----fv-~--~-------------~~~~~~~~~~lr~~~~-~~~~v~lmv~---- 74 (228)
T 1h1y_A 20 NLAAEADRMVRLGADWLHMDIMDGH----FV-P--N-------------LTIGAPVIQSLRKHTK-AYLDCHLMVT---- 74 (228)
T ss_dssp GHHHHHHHHHHTTCSEEEEEEEBSS----SS-S--C-------------BCBCHHHHHHHHTTCC-SEEEEEEESS----
T ss_pred HHHHHHHHHHHcCCCEEEEEEecCC----cC-c--c-------------hhhCHHHHHHHHhhcC-CcEEEEEEec----
Confidence 3445666778899999877643321 21 1 1 1223488899998873 2433 4333
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCC-C
Q 025135 104 HLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGG-F 182 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~-i 182 (257)
++. ++++.+.+.| +|++++|.... .......++.+++. +..++..=. -
T Consensus 75 -------d~~----~~i~~~~~ag------ad~v~vH~~~~-------------~~~~~~~~~~i~~~-g~~igv~~~p~ 123 (228)
T 1h1y_A 75 -------NPS----DYVEPLAKAG------ASGFTFHIEVS-------------RDNWQELIQSIKAK-GMRPGVSLRPG 123 (228)
T ss_dssp -------CGG----GGHHHHHHHT------CSEEEEEGGGC-------------TTTHHHHHHHHHHT-TCEEEEEECTT
T ss_pred -------CHH----HHHHHHHHcC------CCEEEECCCCc-------------ccHHHHHHHHHHHc-CCCEEEEEeCC
Confidence 221 2344555688 89998875311 11113445566554 554443322 2
Q ss_pred CHHHHHHHHHcC--CCcEEEe
Q 025135 183 TRELGIQALAED--GADLVAY 201 (257)
Q Consensus 183 t~~~a~~~l~~g--~~D~V~i 201 (257)
|+.+..+.+.+. .+|+|.+
T Consensus 124 t~~e~~~~~~~~~~~~d~vl~ 144 (228)
T 1h1y_A 124 TPVEEVFPLVEAENPVELVLV 144 (228)
T ss_dssp SCGGGGHHHHHSSSCCSEEEE
T ss_pred CCHHHHHHHHhcCCCCCEEEE
Confidence 444444444441 4999988
No 470
>3qst_A Triosephosphate isomerase, putative; TIM barrel; 1.75A {Trichomonas vaginalis} PDB: 3qsr_A
Probab=85.35 E-value=1.8 Score=37.10 Aligned_cols=43 Identities=9% Similarity=0.026 Sum_probs=37.4
Q ss_pred CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCchHHHHHH
Q 025135 173 QGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNPDLVLRFK 216 (257)
Q Consensus 173 ~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~ 216 (257)
+++|+.+|+++++.+.+++..-.+|.+.+|++.+. |+|..-+.
T Consensus 207 ~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgASL~-~~F~~Ii~ 249 (255)
T 3qst_A 207 KVRILYGGSVKPNNCNELAACPDVDGFLVGGASLE-AGFINIVN 249 (255)
T ss_dssp HCEEEECSCCCTTTHHHHHHSTTCCEEEECGGGGS-TTHHHHHG
T ss_pred cccEEEcCCcCHhHHHHHhcCCCCCEEEeeHHHhh-HHHHHHHH
Confidence 36788888899999999999999999999999998 78776553
No 471
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=85.30 E-value=17 Score=31.27 Aligned_cols=131 Identities=16% Similarity=0.037 Sum_probs=76.2
Q ss_pred HHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCCCCCcHH
Q 025135 35 IQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDATDSDPLG 114 (257)
Q Consensus 35 ~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~~~~~ 114 (257)
+.+|.+.|-|..+---+ .| ....+-|.+.-.+.+.++++..|+. |. -|++++.... ..+.+
T Consensus 90 ~~ag~~~v~i~~~~Sd~--------~~--~~nl~~s~~e~l~~~~~~v~~a~~~-g~---~v~~~~~d~~-----~~~~~ 150 (293)
T 3ewb_X 90 KDAVSPQIHIFLATSDV--------HM--EYKLKMSRAEVLASIKHHISYARQK-FD---VVQFSPEDAT-----RSDRA 150 (293)
T ss_dssp TTCSSEEEEEEEECSHH--------HH--HHTTCCCHHHHHHHHHHHHHHHHTT-CS---CEEEEEETGG-----GSCHH
T ss_pred hhcCCCEEEEEecCcHH--------HH--HHHhCCCHHHHHHHHHHHHHHHHhC-CC---EEEEEeccCC-----CCCHH
Confidence 34789988876654211 11 1123445555566667777766654 32 2445542111 13577
Q ss_pred HHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhC----CcEEEeCCC-C----HH
Q 025135 115 LGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQ----GTFICSGGF-T----RE 185 (257)
Q Consensus 115 ~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~----~pvi~~G~i-t----~~ 185 (257)
...++++.+.+.| ++.|.+.... + ...+......++.+++.++ +|| ..... | ..
T Consensus 151 ~~~~~~~~~~~~G------~~~i~l~DT~----G------~~~P~~v~~lv~~l~~~~~~~~~~~l-~~H~Hnd~Gla~A 213 (293)
T 3ewb_X 151 FLIEAVQTAIDAG------ATVINIPDTV----G------YTNPTEFGQLFQDLRREIKQFDDIIF-ASHCHDDLGMATA 213 (293)
T ss_dssp HHHHHHHHHHHTT------CCEEEEECSS----S------CCCHHHHHHHHHHHHHHCTTGGGSEE-EEECBCTTSCHHH
T ss_pred HHHHHHHHHHHcC------CCEEEecCCC----C------CCCHHHHHHHHHHHHHhcCCccCceE-EEEeCCCcChHHH
Confidence 8899999999999 7777765421 1 1123344466777888876 333 33332 3 56
Q ss_pred HHHHHHHcCCCcEEEec
Q 025135 186 LGIQALAEDGADLVAYG 202 (257)
Q Consensus 186 ~a~~~l~~g~~D~V~ig 202 (257)
.+..+++.| ++.|-.+
T Consensus 214 N~laA~~aG-a~~vd~s 229 (293)
T 3ewb_X 214 NALAAIENG-ARRVEGT 229 (293)
T ss_dssp HHHHHHHTT-CCEEEEB
T ss_pred HHHHHHHhC-CCEEEee
Confidence 777889988 8877433
No 472
>2j27_A Triosephosphate isomerase glycosomal; TIM, 2PG, LOOP7, glycosome, TIM-barrel, gluconeogenesis, lipid synthesis, atomic resolution; 1.15A {Trypanosoma brucei brucei} PDB: 2j24_A 1kv5_A 1tpe_A 1tsi_A* 3tim_A 2v2c_A 2v0t_A 1tri_A 1tti_A 1mss_A 1ttj_A* 2wsq_A 2y70_A 2y6z_A* 1ml1_A 2wsr_A 3q37_A 2v2h_A 2v2d_A 1dkw_A ...
Probab=85.17 E-value=1.9 Score=36.80 Aligned_cols=43 Identities=12% Similarity=0.138 Sum_probs=37.7
Q ss_pred CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCchHHHHHH
Q 025135 173 QGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNPDLVLRFK 216 (257)
Q Consensus 173 ~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~ 216 (257)
+++|+.+|+++++.+.+++..-.+|.+.+|++.+. .+|..-+.
T Consensus 205 ~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~-~~F~~ii~ 247 (250)
T 2j27_A 205 ELRILYGGSVNGKNARTLYQQRDVNGFLVGGASLK-PEFVDIIK 247 (250)
T ss_dssp HCCEEEESSCCTTTHHHHHTSTTCCEEEESGGGGS-TTHHHHHH
T ss_pred cccEEEcCCCCHHHHHHHHcCCCCCeeeeehHHHH-HHHHHHHH
Confidence 37899999999999999998888999999999999 87776554
No 473
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=85.14 E-value=18 Score=31.25 Aligned_cols=104 Identities=16% Similarity=0.036 Sum_probs=60.6
Q ss_pred CCCChhhHHHHHHH----------HHHHHHHHHHcCCCEEEecccccchhhhcC-CCCcCCcCCCCCCchhhHhhHHHHH
Q 025135 13 QALQTSEIPEVIDQ----------YRQAALNAIQAGFDGIEIHGAHGYLIDQFL-KDGINDRTDEYGGSIENRCRFLMQL 81 (257)
Q Consensus 13 ~~lt~~eI~~ii~~----------f~~AA~~a~~aGfDgVEIh~a~GyLl~qFl-Sp~~N~R~D~yGGs~enR~r~~~ei 81 (257)
+.+|...+.+..+. =.-.|+.+.++|||.|-+ +.. |-.-.+ -|.+. .-+++ -+...
T Consensus 19 ~~~t~~~lr~~k~~g~~i~~~tayDa~sA~l~e~aG~d~ilv-GdS--l~~~~lG~~dt~------~vTld----emi~h 85 (281)
T 1oy0_A 19 TKIRTHHLQRWKADGHKWAMLTAYDYSTARIFDEAGIPVLLV-GDS--AANVVYGYDTTV------PISID----ELIPL 85 (281)
T ss_dssp CCCCHHHHHHHHHHTCCEEEEECCSHHHHHHHHTTTCCEEEE-CTT--HHHHTTCCSSSS------SCCGG----GTHHH
T ss_pred CCcCHHHHHHHHhCCCcEEEEeCcCHHHHHHHHHcCCCEEEE-CHH--HHHHHcCCCCCC------CCCHH----HHHHH
Confidence 56899999988874 256788889999999954 211 111000 02211 11222 35566
Q ss_pred HHHHHHHhCCCeEEEEEccCCCCCCCCCCCcHHHHHH-HHHHHHhcCCccCCceeEEEeeC
Q 025135 82 VREVIVAIGADRVGVRMSPAIDHLDATDSDPLGLGLA-VIQGLNKLQIDQGAKLTYLHVTQ 141 (257)
Q Consensus 82 v~aiR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~-l~~~L~~~G~~~~~~vd~i~v~~ 141 (257)
+++|++.+..-.|.+.+. +..|. .+.+.+.+ ..+.+++.| ++.|++..
T Consensus 86 ~~aV~r~~~~~~vvaD~p-fgsy~-----~s~~~a~~na~rl~~eaG------a~aVklEd 134 (281)
T 1oy0_A 86 VRGVVRGAPHALVVADLP-FGSYE-----AGPTAALAAATRFLKDGG------AHAVKLEG 134 (281)
T ss_dssp HHHHHHHCTTSEEEEECC-TTSST-----TCHHHHHHHHHHHHHTTC------CSEEEEEB
T ss_pred HHHHHhcCCCCeEEEECC-CCccc-----CCHHHHHHHHHHHHHHhC------CeEEEECC
Confidence 778888776434555554 21221 23555555 455566699 88888865
No 474
>3qm3_A Fructose-bisphosphate aldolase; structural genomics, center for structural genomics of infec diseases, csgid, TIM beta/alpha-barrel, lyase; 1.85A {Campylobacter jejuni} SCOP: c.1.10.2
Probab=85.06 E-value=21 Score=31.93 Aligned_cols=154 Identities=12% Similarity=0.013 Sum_probs=81.9
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEE
Q 025135 19 EIPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRM 98 (257)
Q Consensus 19 eI~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrl 98 (257)
.|+..++.-.+-.+.+.++||+-|-|-++| =++|...+...++++..++. |- .|-.-|
T Consensus 116 ~i~~~i~a~~~~~~~~~~~GFtSVMiDgS~--------------------lp~eENI~~Tk~vv~~ah~~-gv-sVEaEL 173 (357)
T 3qm3_A 116 WIDGLIEANAQYKKTHGQALFSSHMLDLSE--------------------ESLEENLSTCEVYLQKLDAL-GV-ALEIEL 173 (357)
T ss_dssp HHHHHHHHHHHHHHHHSSCSCSEEECCCTT--------------------SCHHHHHHHHHHHHHHHHHH-TC-EEEEEC
T ss_pred HHHHHHHHhHHHHhhhcCCCCCEEEEeCCC--------------------CCHHHHHHHHHHHHHHHHHc-CC-eEEEEe
Confidence 344444433333445556677777777666 14677899999999998864 21 233333
Q ss_pred cc---CCCC-C-----CCCCCCcHHHHHHHHHHHHhc-CCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHH-HH
Q 025135 99 SP---AIDH-L-----DATDSDPLGLGLAVIQGLNKL-QIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLL-RT 167 (257)
Q Consensus 99 s~---~~~~-~-----~~~~~~~~~~~~~l~~~L~~~-G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 167 (257)
.. .++- . ......+.+++.++++.+-.. | +|+|.+.-++.++.+. ++...........+ +.
T Consensus 174 G~igG~Edgv~~~~~~~~~~yT~Peea~~Fv~~tg~~~g------vD~LAvaiGt~HG~Yk--~g~p~L~~~~L~~i~~~ 245 (357)
T 3qm3_A 174 GCTGGEEDGVDNTGIDNSKLYTQPEDVALAYERLGKISD------KFSIAASFGNVHGVYK--PGNVSLQPEILKNSQKF 245 (357)
T ss_dssp CCCCC-----CCSSTTCTTTSCCHHHHHHHHHHHTTTCS------CEEEECCSSCCCSSCC--SSCCCCCTHHHHHHHHH
T ss_pred eeeccccCCccccccccccccCCHHHHHHHHHHhCCCCc------ccEEEEecCCccCCcC--CCCCCCCHHHHHHHHHH
Confidence 21 1111 0 001124577888887766322 4 6888776554443321 11111122222222 22
Q ss_pred HHHHh------CCcEEEeCC--CCHHHHHHHHHcCCCcEEEech
Q 025135 168 WRRSY------QGTFICSGG--FTRELGIQALAEDGADLVAYGR 203 (257)
Q Consensus 168 ir~~~------~~pvi~~G~--it~~~a~~~l~~g~~D~V~igR 203 (257)
+++.+ ++|++.=|+ +..++..+++..| +-=|=++.
T Consensus 246 i~~~~~~~~~~~vpLVlHGgSG~p~e~i~~ai~~G-V~KiNi~T 288 (357)
T 3qm3_A 246 VKDKFALNSDKPINFVFHGGSGSELKDIKNAVSYG-VIKMNIDT 288 (357)
T ss_dssp HHHHTTCSCSCCSCEEECSCTTCCHHHHHHHHHTT-EEEEEECH
T ss_pred HHHHhccccCCCCcEEEeCCCCCCHHHHHHHHHCC-ceEEEech
Confidence 44444 578776665 4788899999988 43344443
No 475
>2yc6_A Triosephosphate isomerase; glycolysis; HET: PGA; 1.45A {Giardia intestinalis} PDB: 2dp3_A 2yc7_A* 3pf3_A 2yc8_A
Probab=85.00 E-value=2.2 Score=36.49 Aligned_cols=42 Identities=12% Similarity=0.065 Sum_probs=35.5
Q ss_pred CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCchHHHHHH
Q 025135 173 QGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNPDLVLRFK 216 (257)
Q Consensus 173 ~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~ 216 (257)
+++|+.+|+++++.+.+++....+|.+.+|++.+ +|+ +.+|.
T Consensus 208 ~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL-~a~-F~~Ii 249 (257)
T 2yc6_A 208 HIRIIYGGSANGSNNEKLGQCPNIDGFLVGGASL-KPE-FMTMI 249 (257)
T ss_dssp TCEEEEESSCCTTTHHHHHTSTTCCEEEESGGGG-STH-HHHHH
T ss_pred cceEEEcCccCHHHHHHHHcCCCCCeeeecHHHH-HHH-HHHHH
Confidence 4789999999999999999998899999999988 566 55543
No 476
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=84.84 E-value=20 Score=31.47 Aligned_cols=166 Identities=13% Similarity=0.061 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccC--CC
Q 025135 26 QYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPA--ID 103 (257)
Q Consensus 26 ~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~--~~ 103 (257)
...+.++.+.+.|..+|-|.+- | .+ +|+.|-..-|.--++..-|++||+++++-.|...+... +.
T Consensus 59 ~l~~~~~~~~~lGi~~v~LFgv----------p--~~-Kd~~gs~A~~~~g~v~rair~iK~~~pdl~vitDvcLc~YT~ 125 (323)
T 1l6s_A 59 HLAREIERIANAGIRSVMTFGI----------S--HH-TDETGSDAWREDGLVARMSRICKQTVPEMIVMSDTCFCEYTS 125 (323)
T ss_dssp GHHHHHHHHHHHTCCEEEEEEE----------C--SS-CBSSCGGGGSTTSHHHHHHHHHHHHCTTSEEEEEECSTTTBS
T ss_pred HHHHHHHHHHHCCCCEEEEeCC----------C--CC-CCccccccCCCCCcHHHHHHHHHHHCCCeEEEEeeeccccCC
Confidence 3455666788999999998642 3 23 88888766677779999999999999764565565543 22
Q ss_pred CCCCC---CC--Cc---HHHHHHHHHHHHhcCCccCCceeEEEeeC---C------------Cccc-CCCcCCCCCCCch
Q 025135 104 HLDAT---DS--DP---LGLGLAVIQGLNKLQIDQGAKLTYLHVTQ---P------------RYTA-YGQTESGRPGTED 159 (257)
Q Consensus 104 ~~~~~---~~--~~---~~~~~~l~~~L~~~G~~~~~~vd~i~v~~---~------------~~~~-~~~~~~~~~~~~~ 159 (257)
+..++ ++ +. .+.....+-...++| .|.|.-+. + .+.. .-++++.++.
T Consensus 126 HGHcGil~~g~V~ND~Tl~~Lak~Als~A~AG------AdiVAPSdMMDGrV~aIR~aLd~~G~~~v~ImsYsaKyA--- 196 (323)
T 1l6s_A 126 HGHCGVLCEHGVDNDATLENLGKQAVVAAAAG------ADFIAPSAAMDGQVQAIRQALDAAGFKDTAIMSYSTKFA--- 196 (323)
T ss_dssp SCCSSCBCSSSBCHHHHHHHHHHHHHHHHHHT------CSEEEECSCCTTHHHHHHHHHHHTTCTTCEEBCCCEEBC---
T ss_pred CCceEeccCCcCccHHHHHHHHHHHHHHHHcC------CCeEecccccccHHHHHHHHHHhCCCCCceeeehhHHHh---
Confidence 22221 11 12 222233344457789 77775332 1 1110 0011111111
Q ss_pred hHHHHHHHHHHHhC-CcEEEeCCC-----C---HH----HHHHHHHcCCCcEEEechHHhhCchHHHHHHcCCC
Q 025135 160 EEAQLLRTWRRSYQ-GTFICSGGF-----T---RE----LGIQALAEDGADLVAYGRLFISNPDLVLRFKLNAP 220 (257)
Q Consensus 160 ~~~~~~~~ir~~~~-~pvi~~G~i-----t---~~----~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~g~~ 220 (257)
..+.-.+|++++ .|- |.= + .. ++..-+++| +|+||+ .|.+.--|+++++++...
T Consensus 197 --SafYGPFRdAa~Sap~---GDRktYQmdpaN~~EAlre~~~Di~EG-AD~vMV-KPal~YLDIi~~vk~~~~ 263 (323)
T 1l6s_A 197 --SSFYGPFREAAGSALK---GDRKSYQMNPMNRREAIRESLLDEAQG-ADCLMV-KPAGAYLDIVRELRERTE 263 (323)
T ss_dssp --CSCCHHHHHHHTCCCS---SCCTTTSBCTTCHHHHHHHHHHHHHTT-CSBEEE-ESCTTCHHHHHHHHTTCS
T ss_pred --HHhhHHHHHHhcCCCC---CCccccCCCCCCHHHHHHHHHhhHHhC-CceEEE-ecCcchhHHHHHHHHhcC
Confidence 011233577764 343 432 2 22 334456777 999987 677888899999997543
No 477
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=84.74 E-value=3.8 Score=35.48 Aligned_cols=80 Identities=13% Similarity=0.149 Sum_probs=46.7
Q ss_pred HHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHH---HHHhCCCeEEEEEccCCC
Q 025135 27 YRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREV---IVAIGADRVGVRMSPAID 103 (257)
Q Consensus 27 f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~ai---R~~vg~~~v~vrls~~~~ 103 (257)
-..|++.|.++|+|.|.-.-|. ..||......+++.++++.. ....|. .++||.++.
T Consensus 174 i~~A~~ia~eaGADfVKTSTGf-----------------~~~gAT~edv~lm~~~v~~~~~~~~~tg~-~vgVKaaGG-- 233 (281)
T 2a4a_A 174 IIKTTLAVLNGNADFIKTSTGK-----------------VQINATPSSVEYIIKAIKEYIKNNPEKNN-KIGLKVSGG-- 233 (281)
T ss_dssp HHHHHHHHHTTTCSEEECCCSC-----------------SSCCCCHHHHHHHHHHHHHHHHHCGGGTT-CCEEEEESS--
T ss_pred HHHHHHHHHHhCCCEEEeCCCC-----------------CCCCCCHHHHHHHHHHHHHhhcccccCCC-CceEEEeCC--
Confidence 3578899999999999965443 11443333455655555443 222354 689999963
Q ss_pred CCCCCCCCcHHHHHHHHHHHHh-cCCccCCceeEEE
Q 025135 104 HLDATDSDPLGLGLAVIQGLNK-LQIDQGAKLTYLH 138 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~L~~-~G~~~~~~vd~i~ 138 (257)
.-+.+++..+.+.-.+ +| .+|++
T Consensus 234 ------Irt~e~al~~i~aga~~lG------~~w~~ 257 (281)
T 2a4a_A 234 ------ISDLNTASHYILLARRFLS------SLACH 257 (281)
T ss_dssp ------CCSHHHHHHHHHHHHHHTC-----------
T ss_pred ------CCCHHHHHHHHHHhhhhcc------ccccc
Confidence 1357777777765543 67 77875
No 478
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=84.57 E-value=11 Score=32.17 Aligned_cols=97 Identities=14% Similarity=0.017 Sum_probs=56.6
Q ss_pred cHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcC----------CCCCCCchhHHHHHHHHHHH-hCCcEEEeC
Q 025135 112 PLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTE----------SGRPGTEDEEAQLLRTWRRS-YQGTFICSG 180 (257)
Q Consensus 112 ~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~ir~~-~~~pvi~~G 180 (257)
+.+.+.++++.|++.| +|+|++--|.-+...... ..+. ......+.++.+|+. .++||++-+
T Consensus 30 ~~~~~~~~~~~l~~~G------aD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~-~~~~~~~~v~~ir~~~~~~Pivlm~ 102 (267)
T 3vnd_A 30 SPELSLKIIQTLVDNG------ADALELGFPFSDPLADGPVIQGANLRSLAAGT-TSSDCFDIITKVRAQHPDMPIGLLL 102 (267)
T ss_dssp CHHHHHHHHHHHHHTT------CSSEEEECCCSCCTTCCHHHHHHHHHHHHTTC-CHHHHHHHHHHHHHHCTTCCEEEEE
T ss_pred CHHHHHHHHHHHHHcC------CCEEEECCCCCCCCCCCHHHHHHHHHHHHcCC-CHHHHHHHHHHHHhcCCCCCEEEEe
Confidence 3678899999999999 999998654211110000 0000 000123456778887 789987765
Q ss_pred CCCH------HH-HHHHHHcCCCcEEEechHHhhCch-HHHHHH
Q 025135 181 GFTR------EL-GIQALAEDGADLVAYGRLFISNPD-LVLRFK 216 (257)
Q Consensus 181 ~it~------~~-a~~~l~~g~~D~V~igR~~iadP~-l~~k~~ 216 (257)
-+++ +. ++++.+.| +|.|.+.---+.+.+ +.+.++
T Consensus 103 Y~npv~~~g~e~f~~~~~~aG-vdgvii~Dlp~ee~~~~~~~~~ 145 (267)
T 3vnd_A 103 YANLVFANGIDEFYTKAQAAG-VDSVLIADVPVEESAPFSKAAK 145 (267)
T ss_dssp CHHHHHHHCHHHHHHHHHHHT-CCEEEETTSCGGGCHHHHHHHH
T ss_pred cCcHHHHhhHHHHHHHHHHcC-CCEEEeCCCCHhhHHHHHHHHH
Confidence 4443 44 45666665 999888655444443 334443
No 479
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=84.38 E-value=3.1 Score=39.06 Aligned_cols=67 Identities=18% Similarity=0.232 Sum_probs=47.5
Q ss_pred HHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhC-CcEEEeCCC-CHHHHHHHHHc
Q 025135 116 GLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQ-GTFICSGGF-TRELGIQALAE 193 (257)
Q Consensus 116 ~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~G~i-t~~~a~~~l~~ 193 (257)
..+.++.|.++| ++.+.+..... ........++++++.++ +||++ |++ +.+.|..+++.
T Consensus 257 ~~era~aLveaG------vd~I~Id~a~g------------~~~~v~~~i~~i~~~~~~~~vi~-g~v~t~e~a~~~~~a 317 (511)
T 3usb_A 257 AMTRIDALVKAS------VDAIVLDTAHG------------HSQGVIDKVKEVRAKYPSLNIIA-GNVATAEATKALIEA 317 (511)
T ss_dssp HHHHHHHHHHTT------CSEEEEECSCT------------TSHHHHHHHHHHHHHCTTSEEEE-EEECSHHHHHHHHHH
T ss_pred hHHHHHHHHhhc------cceEEeccccc------------chhhhhhHHHHHHHhCCCceEEe-eeeccHHHHHHHHHh
Confidence 345677888899 78877753210 12234567788998875 57765 455 99999999999
Q ss_pred CCCcEEEec
Q 025135 194 DGADLVAYG 202 (257)
Q Consensus 194 g~~D~V~ig 202 (257)
| +|+|.+|
T Consensus 318 G-ad~i~vg 325 (511)
T 3usb_A 318 G-ANVVKVG 325 (511)
T ss_dssp T-CSEEEEC
T ss_pred C-CCEEEEC
Confidence 8 9999763
No 480
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=84.23 E-value=1.9 Score=35.93 Aligned_cols=50 Identities=24% Similarity=0.305 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEcc
Q 025135 26 QYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSP 100 (257)
Q Consensus 26 ~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~ 100 (257)
+..++|+.+.++|.|+|..+.| + ..||. ..+.++.+++.++. .+.|+.+.
T Consensus 133 ~~~~~a~~a~eaGad~I~tstg--~---------------~~gga-------~~~~i~~v~~~v~~-~ipVia~G 182 (225)
T 1mzh_A 133 EIKKAVEICIEAGADFIKTSTG--F---------------APRGT-------TLEEVRLIKSSAKG-RIKVKASG 182 (225)
T ss_dssp HHHHHHHHHHHHTCSEEECCCS--C---------------SSSCC-------CHHHHHHHHHHHTT-SSEEEEES
T ss_pred HHHHHHHHHHHhCCCEEEECCC--C---------------CCCCC-------CHHHHHHHHHHhCC-CCcEEEEC
Confidence 4577888999999999965542 2 12442 34667788888864 45666664
No 481
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=84.20 E-value=7.4 Score=34.23 Aligned_cols=57 Identities=14% Similarity=0.155 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCC
Q 025135 20 IPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGA 91 (257)
Q Consensus 20 I~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~ 91 (257)
++.+.+...+-++...++|.|+|.|.-..+- +.||||. .=-+|...-++.|-+.++.
T Consensus 185 l~~i~~~~~~~~~~qi~aGad~i~i~D~~a~--~~~lsp~-------------~f~~f~~p~~k~i~~~~~~ 241 (348)
T 4ay7_A 185 LDIATEASIIYANAMVEAGADVIAIADPVAS--PDLMSPD-------------SFRQFLKSRLQKFASSVNS 241 (348)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEECGGGS--TTTSCHH-------------HHHHHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHHHHHhcCCCcceeeccccc--cccCCHH-------------HHHHHhhHHHHHHHhhccC
Confidence 3344444455556667899999999654321 1255543 1235777777777777764
No 482
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=84.17 E-value=29 Score=35.83 Aligned_cols=139 Identities=14% Similarity=0.048 Sum_probs=82.1
Q ss_pred HHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCCC-CC
Q 025135 32 LNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDAT-DS 110 (257)
Q Consensus 32 ~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~~-~~ 110 (257)
++|.++|.|.|-|..+. | ..+-+.+.++.+++. |. .+.+-++...++.+.. ..
T Consensus 652 ~~a~~~g~d~irif~sl------------~------------~~~~~~~~i~~~~~~-g~-~v~~~i~~~~~~~d~~r~~ 705 (1165)
T 2qf7_A 652 RQAAKGGIDLFRVFDCL------------N------------WVENMRVSMDAIAEE-NK-LCEAAICYTGDILNSARPK 705 (1165)
T ss_dssp HHHHHHTCCEEEEECTT------------C------------CGGGGHHHHHHHHHT-TC-EEEEEEECCSCTTCTTSGG
T ss_pred HHHHhcCcCEEEEEeeH------------H------------HHHHHHHHHHHHHhc-cc-eEEEEEEEeccccCCCCCC
Confidence 34556799998884331 1 134566777777765 32 3333343222222221 11
Q ss_pred CcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCCC----HHH
Q 025135 111 DPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGFT----REL 186 (257)
Q Consensus 111 ~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~it----~~~ 186 (257)
.+.+.+.++++.+.++| ++.|.+.... + ...+......++.+++.+++||-.=..-| ...
T Consensus 706 ~~~~~~~~~~~~~~~~G------a~~i~l~DT~----G------~~~P~~~~~lv~~l~~~~~~~i~~H~Hnd~GlAvAn 769 (1165)
T 2qf7_A 706 YDLKYYTNLAVELEKAG------AHIIAVKDMA----G------LLKPAAAKVLFKALREATGLPIHFHTHDTSGIAAAT 769 (1165)
T ss_dssp GCHHHHHHHHHHHHHTT------CSEEEEEETT----C------CCCHHHHHHHHHHHHHHCSSCEEEEECBTTSCHHHH
T ss_pred CCHHHHHHHHHHHHHcC------CCEEEEeCcc----C------CcCHHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 45788899999999999 7777665421 1 11233445677888988877764322212 567
Q ss_pred HHHHHHcCCCcEEEechHHh----hCchHHH
Q 025135 187 GIQALAEDGADLVAYGRLFI----SNPDLVL 213 (257)
Q Consensus 187 a~~~l~~g~~D~V~igR~~i----adP~l~~ 213 (257)
+..+++.| ||.|-.+=.-+ .||.+-.
T Consensus 770 ~laAv~aG-a~~vd~ti~GlGe~~Gn~~le~ 799 (1165)
T 2qf7_A 770 VLAAVEAG-VDAVDAAMDALSGNTSQPCLGS 799 (1165)
T ss_dssp HHHHHHTT-CSEEEEBCGGGCSBTSCCBHHH
T ss_pred HHHHHHhC-CCEEEecccccCCCccchhHHH
Confidence 78899988 88886543333 4776543
No 483
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=84.03 E-value=11 Score=38.30 Aligned_cols=106 Identities=14% Similarity=0.000 Sum_probs=60.7
Q ss_pred HHHHHHHHHhCCCeEEEEEccCCCCCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCC-C-CC
Q 025135 80 QLVREVIVAIGADRVGVRMSPAIDHLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGR-P-GT 157 (257)
Q Consensus 80 eiv~aiR~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~-~-~~ 157 (257)
+-++.+|+..++.++++=+... .+.+++.++++.+++.| +|+|+++-...........|. . ..
T Consensus 623 ~~i~~~~~~~~~~~~i~~i~~g---------~~~~~~~~~a~~~~~~g------~d~iein~~~P~~~~~~~~G~~~~~~ 687 (1025)
T 1gte_A 623 QSVTELKADFPDNIVIASIMCS---------YNKNDWMELSRKAEASG------ADALELNLSCPHGMGERGMGLACGQD 687 (1025)
T ss_dssp HHHHHHHHHCTTSEEEEEECCC---------SCHHHHHHHHHHHHHTT------CSEEEEECCCBCCCC-----SBGGGC
T ss_pred HHHHHHHhcCCCCCeEEEecCC---------CCHHHHHHHHHHHHhcC------CCEEEEECCCCCCCCCCCcccccccC
Confidence 3356667665444776655421 24678888999999999 788777532111110000000 0 01
Q ss_pred chhHHHHHHHHHHHhCCcEEE--eCCC-CHHH-HHHHHHcCCCcEEEe
Q 025135 158 EDEEAQLLRTWRRSYQGTFIC--SGGF-TREL-GIQALAEDGADLVAY 201 (257)
Q Consensus 158 ~~~~~~~~~~ir~~~~~pvi~--~G~i-t~~~-a~~~l~~g~~D~V~i 201 (257)
.....+.++.+++.+++||++ ..++ +..+ |..+.+.| +|+|.+
T Consensus 688 ~~~~~~iv~~v~~~~~~Pv~vK~~~~~~~~~~~a~~~~~~G-~d~i~v 734 (1025)
T 1gte_A 688 PELVRNICRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGG-ADGVTA 734 (1025)
T ss_dssp HHHHHHHHHHHHHHCSSCEEEEECSCSSCHHHHHHHHHHHT-CSEEEE
T ss_pred HHHHHHHHHHHHHhhCCceEEEeCCChHHHHHHHHHHHHcC-CCEEEE
Confidence 122345677889888999875 3444 4444 55555555 999988
No 484
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=83.97 E-value=21 Score=31.11 Aligned_cols=159 Identities=12% Similarity=0.066 Sum_probs=82.4
Q ss_pred HHHHHHHHHcCCCEEEeccc-ccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCC
Q 025135 28 RQAALNAIQAGFDGIEIHGA-HGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLD 106 (257)
Q Consensus 28 ~~AA~~a~~aGfDgVEIh~a-~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~ 106 (257)
+-.|+.+.++|||+|-+.+. .+. +..=-|.+. .=+++ -++..+++|++.+..-||.+.+-- +|
T Consensus 28 ~~sA~l~e~aGf~ai~vsG~~~a~--~~~G~pD~~------~vt~~----em~~~~~~I~~~~~~~PviaD~d~--Gy-- 91 (302)
T 3fa4_A 28 GLSARVALSAGFDALYMTGAGTAA--SVHGQADLG------ICTLN----DMRANAEMISNISPSTPVIADADT--GY-- 91 (302)
T ss_dssp HHHHHHHHTTTCSCEEECHHHHHH--HHHSCCSSS------CCCHH----HHHHHHHHHHTTSTTSCEEEECTT--TT--
T ss_pred HHHHHHHHHcCCCEEEeCcHHHHH--HHcCCCCCC------cCCHH----HHHHHHHHHHhhccCCCEEEECCC--CC--
Confidence 45688888999999998532 111 001002211 11222 233445555554333378877652 23
Q ss_pred CCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCccc-CCCcCCCCCCCchhHHHHHHHHHHH------hCCcEEEe
Q 025135 107 ATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTA-YGQTESGRPGTEDEEAQLLRTWRRS------YQGTFICS 179 (257)
Q Consensus 107 ~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ir~~------~~~pvi~~ 179 (257)
++ .+...+.++.++++| +..|++....... .+. ..+. .-....+++.+|+.+ .+.+++.+
T Consensus 92 ---g~-~~~v~~tv~~l~~aG------aagv~iEDq~~~Krcgh-~~gk--~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ 158 (302)
T 3fa4_A 92 ---GG-PIMVARTTEQYSRSG------VAAFHIEDQVQTKRCGH-LAGK--ILVDTDTYVTRIRAAVQARQRIGSDIVVI 158 (302)
T ss_dssp ---SS-HHHHHHHHHHHHHTT------CCEEEECSBCCC--------CC--CBCCHHHHHHHHHHHHHHHHHHTCCCEEE
T ss_pred ---CC-HHHHHHHHHHHHHcC------CcEEEECCCCCCcccCC-CCCC--eecCHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 12 456778899999999 8889886532110 000 0000 011123344444333 24455555
Q ss_pred CCC-C-----HH----HHHHHHHcCCCcEEEechHHhhCchHHHHHHcC
Q 025135 180 GGF-T-----RE----LGIQALAEDGADLVAYGRLFISNPDLVLRFKLN 218 (257)
Q Consensus 180 G~i-t-----~~----~a~~~l~~g~~D~V~igR~~iadP~l~~k~~~g 218 (257)
.+. . .+ -+..+++.| +|.|.+= .+.+++-++++.+.
T Consensus 159 ARTDa~~~~gldeAi~Ra~ay~eAG-AD~ifi~--g~~~~~ei~~~~~~ 204 (302)
T 3fa4_A 159 ARTDSLQTHGYEESVARLRAARDAG-ADVGFLE--GITSREMARQVIQD 204 (302)
T ss_dssp EEECCHHHHCHHHHHHHHHHHHTTT-CSEEEET--TCCCHHHHHHHHHH
T ss_pred EEecccccCCHHHHHHHHHHHHHcC-CCEEeec--CCCCHHHHHHHHHH
Confidence 443 1 23 345566666 9999873 35788888777654
No 485
>1a0c_A Xylose isomerase; ketolisomerase, xylose metabolism, glucose-fructose interconversion, hydride transfer; 2.50A {Thermoanaerobacteriumthermosulfurigenes} SCOP: c.1.15.3 PDB: 1a0d_A 1a0e_A
Probab=83.95 E-value=16 Score=33.42 Aligned_cols=58 Identities=9% Similarity=-0.016 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC
Q 025135 20 IPEVIDQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD 92 (257)
Q Consensus 20 I~~ii~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~ 92 (257)
++.+....-++...+.++|||+||+|... +.| +|-++..+..-+.++++.+++.+...
T Consensus 75 ~~~~~~~~~~ale~~a~lG~~~VE~~~~~-------~~p--------~~~~~~e~~~~l~~~~~~lk~~l~~~ 132 (438)
T 1a0c_A 75 MDIAKARVEAAFEFFDKINAPYFCFHDRD-------IAP--------EGDTLRETNKNLDTIVAMIKDYLKTS 132 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEEHHH-------HSC--------CCSSHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHhhHHHHHHHHHHcCCCEEEecccc-------ccc--------cccchhhhhccHHHHHHHHHHHHHHh
Confidence 66666666777788899999999996432 001 23233222233456677777776543
No 486
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=83.81 E-value=5.6 Score=33.63 Aligned_cols=48 Identities=13% Similarity=0.143 Sum_probs=33.8
Q ss_pred HHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCC-chhhHhhHHHHHHHHHHHHhCCCeEEEEEcc
Q 025135 27 YRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGG-SIENRCRFLMQLVREVIVAIGADRVGVRMSP 100 (257)
Q Consensus 27 f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGG-s~enR~r~~~eiv~aiR~~vg~~~v~vrls~ 100 (257)
-.++++.|.++|.|.|...-|. ..|| ++ +-|+.+|+.+|+ +++||.+.
T Consensus 159 i~~a~~ia~~aGADfVKTSTGf-----------------~~ggAt~--------~dv~lmr~~vg~-~v~VKasG 207 (239)
T 3ngj_A 159 KVEVCKRCVAAGAEYVKTSTGF-----------------GTHGATP--------EDVKLMKDTVGD-KALVKAAG 207 (239)
T ss_dssp HHHHHHHHHHHTCSEEECCCSS-----------------SSCCCCH--------HHHHHHHHHHGG-GSEEEEES
T ss_pred HHHHHHHHHHHCcCEEECCCCC-----------------CCCCCCH--------HHHHHHHHhhCC-CceEEEeC
Confidence 3577889999999999976553 1244 33 335566777764 79999995
No 487
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=83.69 E-value=4.2 Score=35.88 Aligned_cols=41 Identities=12% Similarity=0.071 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHhCCcEEEe--CC-CCHHHHHHHHHcCCCcEEEec
Q 025135 161 EAQLLRTWRRSYQGTFICS--GG-FTRELGIQALAEDGADLVAYG 202 (257)
Q Consensus 161 ~~~~~~~ir~~~~~pvi~~--G~-it~~~a~~~l~~g~~D~V~ig 202 (257)
..+.++.+++.+++||++- |. ++++++..+.+.| +|+|.+.
T Consensus 166 ~~~~i~~vr~~~~~Pv~vK~~~~~~~~~~a~~a~~~G-ad~I~v~ 209 (349)
T 1p0k_A 166 ALKRIEQICSRVSVPVIVKEVGFGMSKASAGKLYEAG-AAAVDIG 209 (349)
T ss_dssp HHHHHHHHHHHCSSCEEEEEESSCCCHHHHHHHHHHT-CSEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCHHHHHHHHHcC-CCEEEEc
Confidence 3567788999999998874 33 5899999999887 9999884
No 488
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=83.54 E-value=1.2 Score=36.33 Aligned_cols=118 Identities=9% Similarity=0.025 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCC-eEEEEEccCCCC
Q 025135 26 QYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGAD-RVGVRMSPAIDH 104 (257)
Q Consensus 26 ~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~-~v~vrls~~~~~ 104 (257)
.+.++++.+.++|.|.+++-.-.|- | .+ ...+..++++++|+.++.. .+.++++.
T Consensus 17 ~~~~~~~~~~~~G~~~i~~~~~dg~----~------~~----------~~~~g~~~i~~i~~~~~~~~~v~l~v~d---- 72 (220)
T 2fli_A 17 NFASELARIEETDAEYVHIDIMDGQ----F------VP----------NISFGADVVASMRKHSKLVFDCHLMVVD---- 72 (220)
T ss_dssp GHHHHHHHHHHTTCCEEEEEEEBSS----S------SS----------CBCBCHHHHHHHHTTCCSEEEEEEESSS----
T ss_pred HHHHHHHHHHHcCCCEEEEEeecCC----C------CC----------ccccCHHHHHHHHHhCCCCEEEEEeecC----
Confidence 4456777788899999776532110 0 01 1123367888899887432 34555542
Q ss_pred CCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-C
Q 025135 105 LDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-T 183 (257)
Q Consensus 105 ~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t 183 (257)
+.+ .++.+.++| +|++++|.... .......+.+++. +..++.+=.- |
T Consensus 73 -------~~~----~i~~~~~~g------ad~v~vh~~~~--------------~~~~~~~~~~~~~-g~~i~~~~~~~t 120 (220)
T 2fli_A 73 -------PER----YVEAFAQAG------ADIMTIHTEST--------------RHIHGALQKIKAA-GMKAGVVINPGT 120 (220)
T ss_dssp -------GGG----GHHHHHHHT------CSEEEEEGGGC--------------SCHHHHHHHHHHT-TSEEEEEECTTS
T ss_pred -------HHH----HHHHHHHcC------CCEEEEccCcc--------------ccHHHHHHHHHHc-CCcEEEEEcCCC
Confidence 111 236677889 89998875311 0112344455543 4444433222 4
Q ss_pred HHHHHHHHHcCCCcEEE
Q 025135 184 RELGIQALAEDGADLVA 200 (257)
Q Consensus 184 ~~~a~~~l~~g~~D~V~ 200 (257)
+.+..+.+..+ +|+|.
T Consensus 121 ~~e~~~~~~~~-~d~vl 136 (220)
T 2fli_A 121 PATALEPLLDL-VDQVL 136 (220)
T ss_dssp CGGGGGGGTTT-CSEEE
T ss_pred CHHHHHHHHhh-CCEEE
Confidence 44444444555 89883
No 489
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=83.45 E-value=3.8 Score=33.56 Aligned_cols=76 Identities=13% Similarity=0.093 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHHHHHHHHH
Q 025135 114 GLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRELGIQALA 192 (257)
Q Consensus 114 ~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~~a~~~l~ 192 (257)
+++.++++.+.+.| ++++.+... .+...+.++.+++ -.. .+..|-+ +.++++.+++
T Consensus 25 ~~~~~~~~~l~~gG------v~~iel~~k---------------~~~~~~~i~~~~~-~~~-~~gag~vl~~d~~~~A~~ 81 (207)
T 2yw3_A 25 EDLLGLARVLEEEG------VGALEITLR---------------TEKGLEALKALRK-SGL-LLGAGTVRSPKEAEAALE 81 (207)
T ss_dssp CCHHHHHHHHHHTT------CCEEEEECS---------------STHHHHHHHHHTT-SSC-EEEEESCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC------CCEEEEeCC---------------ChHHHHHHHHHhC-CCC-EEEeCeEeeHHHHHHHHH
Confidence 34577899999999 888887642 1122355566666 222 4455556 8999999999
Q ss_pred cCCCcEEEechHHhhCchHHHHHH
Q 025135 193 EDGADLVAYGRLFISNPDLVLRFK 216 (257)
Q Consensus 193 ~g~~D~V~igR~~iadP~l~~k~~ 216 (257)
.| +|+|..+. .|+++.+..+
T Consensus 82 ~G-Ad~v~~~~---~d~~v~~~~~ 101 (207)
T 2yw3_A 82 AG-AAFLVSPG---LLEEVAALAQ 101 (207)
T ss_dssp HT-CSEEEESS---CCHHHHHHHH
T ss_pred cC-CCEEEcCC---CCHHHHHHHH
Confidence 98 99999873 5677765544
No 490
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=83.35 E-value=12 Score=31.37 Aligned_cols=82 Identities=10% Similarity=0.032 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCC--c--------CCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC
Q 025135 113 LGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQ--T--------ESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF 182 (257)
Q Consensus 113 ~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~--~--------~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i 182 (257)
.+...++++.|++.| +|+|++..|.-+.... + ...+. ........++.+|+.+++||++....
T Consensus 31 ~~~~~~~~~~l~~~G------ad~ielg~p~~dp~~dg~~i~~a~~~al~~g~-~~~~~~~~i~~ir~~~~~Pv~~m~~~ 103 (262)
T 1rd5_A 31 LATTAEALRLLDGCG------ADVIELGVPCSDPYIDGPIIQASVARALASGT-TMDAVLEMLREVTPELSCPVVLLSYY 103 (262)
T ss_dssp HHHHHHHHHHHHHTT------CSSEEEECCCSCCTTSCHHHHHHHHHHHTTTC-CHHHHHHHHHHHGGGCSSCEEEECCS
T ss_pred HHHHHHHHHHHHHcC------CCEEEECCCCCCcccCCHHHHHHHHHHHHcCC-CHHHHHHHHHHHHhcCCCCEEEEecC
Confidence 577888999999999 8999986542211000 0 00000 01112345677888888998876544
Q ss_pred CHHH---HHHHHHcCCCcEEEec
Q 025135 183 TREL---GIQALAEDGADLVAYG 202 (257)
Q Consensus 183 t~~~---a~~~l~~g~~D~V~ig 202 (257)
++.. .+.+.+.| +|.|.+.
T Consensus 104 ~~~~~~~~~~a~~aG-adgv~v~ 125 (262)
T 1rd5_A 104 KPIMFRSLAKMKEAG-VHGLIVP 125 (262)
T ss_dssp HHHHSCCTHHHHHTT-CCEEECT
T ss_pred cHHHHHHHHHHHHcC-CCEEEEc
Confidence 4322 33466666 9988885
No 491
>2jgq_A Triosephosphate isomerase; glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, fatty acid biosynthesis; HET: QGA; 2.3A {Helicobacter pylori}
Probab=82.79 E-value=2.1 Score=36.13 Aligned_cols=53 Identities=9% Similarity=0.042 Sum_probs=42.0
Q ss_pred HHHHHHHHHHh--CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCchHHHHH
Q 025135 162 AQLLRTWRRSY--QGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNPDLVLRF 215 (257)
Q Consensus 162 ~~~~~~ir~~~--~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~ 215 (257)
.+....||+.+ +++|+.+|+++++.+.+++..-.+|.+.+|++.+. |+-+.++
T Consensus 175 ~ev~~~IR~~l~~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsl~-a~~f~~i 229 (233)
T 2jgq_A 175 YLTHGFLKQILNQKTPLLYGGSVNTQNAKEILGIDSVDGLLIGSASWE-LENFKTI 229 (233)
T ss_dssp HHHHHHHHHHSCTTSCEEEESSCCTTTHHHHHTSTTCCEEEESGGGGS-HHHHHHH
T ss_pred HHHHHHHHHHHhcCCcEEEcCCcChhhHHHHhcCCCCCeeEecHHHhC-hHHHHHH
Confidence 34556688876 37899999999999999999999999999999884 5433343
No 492
>3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis}
Probab=81.91 E-value=21 Score=30.89 Aligned_cols=125 Identities=21% Similarity=0.127 Sum_probs=64.5
Q ss_pred HHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCC--C--eEEEEEccCCC
Q 025135 28 RQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGA--D--RVGVRMSPAID 103 (257)
Q Consensus 28 ~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~--~--~v~vrls~~~~ 103 (257)
.++.+.|.++|+..|+- |. -|| + -+.+-+.++..++..+- + .+.-|+... +
T Consensus 68 ~~~v~~Al~~Gi~~~DT--A~-----------------~Yg-n----E~~vG~~l~~~~~~~~i~r~~~~i~~k~~~~-~ 122 (314)
T 3b3d_A 68 VNAVKTAIVHGYRSIDT--AA-----------------IYG-N----EAGVGEGIREGIEEAGISREDLFITSKVWNA-D 122 (314)
T ss_dssp HHHHHHHHHHTCCEEEC--CG-----------------GGT-C----HHHHHHHHHHHHHHHTCCGGGCEEEEEECGG-G
T ss_pred HHHHHHHHHcCCCEEEC--cc-----------------ccC-C----hHHHHHHHHHHHHHhCCCcccccccccCcCC-C
Confidence 44556778999999882 22 355 1 23344445444444332 2 345555432 1
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCCC
Q 025135 104 HLDATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGFT 183 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~it 183 (257)
+ ........+-+.|+.+|.+. +|.+.+|.+... .....+..+..+++.-.+--|++..++
T Consensus 123 ~------~~~~~~~~~e~SL~rL~~dy---iDL~~~H~~~~~-----------~~~e~~~al~~l~~~Gkir~iGvSn~~ 182 (314)
T 3b3d_A 123 L------GYEETLAAFETSLSKLGLDY---LDLYLIHWPVEG-----------KYKEAWRALETLYKEGRIKAIGVSNFQ 182 (314)
T ss_dssp C------SHHHHHHHHHHHHHHHTCSC---EEEEEESSCCTT-----------THHHHHHHHHHHHHTTSEEEEEEESCC
T ss_pred C------CHHHHHHHHHHHHHHhCCCc---cccccccccccc-----------chhHHHHHHHHHHHCCCEeEEEecCCc
Confidence 1 12223344667788888221 333334432110 122334555666666556667777777
Q ss_pred HHHHHHHHHcCCCc
Q 025135 184 RELGIQALAEDGAD 197 (257)
Q Consensus 184 ~~~a~~~l~~g~~D 197 (257)
++..+++++...++
T Consensus 183 ~~~l~~~~~~~~i~ 196 (314)
T 3b3d_A 183 IHHLEDLMTAAEIK 196 (314)
T ss_dssp HHHHHHHTTTCSSC
T ss_pred hHHHHHHHHhcCCC
Confidence 77777777655444
No 493
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=81.82 E-value=22 Score=31.65 Aligned_cols=124 Identities=14% Similarity=0.195 Sum_probs=65.8
Q ss_pred HHcCCC-----EEEecccccchhhhcCCCCcCCcCCCCCCchhhHh---hHHHHHHHHHHHHhCCCeEEEEEccCCCCCC
Q 025135 35 IQAGFD-----GIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRC---RFLMQLVREVIVAIGADRVGVRMSPAIDHLD 106 (257)
Q Consensus 35 ~~aGfD-----gVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~---r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~ 106 (257)
++||.| +|.++. |-...+.++....+ -+-++-++. .|..|-++.+++.+...-|.+=-+++
T Consensus 31 ~~aGad~~~d~avKfQt---~~~d~l~~~~~~~~---~~~~~~~~~~~~el~~e~~~~L~~~~~~~Gi~~~st~f----- 99 (350)
T 3g8r_A 31 RESCQGFDFDFGFKLQY---RNLDTFIHSSFKGR---DDVKYVKRFEETRLQPEQMQKLVAEMKANGFKAICTPF----- 99 (350)
T ss_dssp HHHTTTCCSEEEEEEEE---CCHHHHBCGGGTTC---CSSSSHHHHHHTCCCHHHHHHHHHHHHHTTCEEEEEEC-----
T ss_pred HHhCCcccCCeeEEccc---cchhhhcChhccCc---cHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCcEEeccC-----
Confidence 456777 998864 33444444432111 111222333 25566666666555322122212332
Q ss_pred CCCCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCC-CHH
Q 025135 107 ATDSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGF-TRE 185 (257)
Q Consensus 107 ~~~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~i-t~~ 185 (257)
+.+ -++.|++.| ++++.|..+.. .+..+++.+.+ .+.|||++-|+ |.+
T Consensus 100 -----D~~----svd~l~~~~------v~~~KI~S~~~---------------~N~pLL~~va~-~gKPviLstGmstl~ 148 (350)
T 3g8r_A 100 -----DEE----SVDLIEAHG------IEIIKIASCSF---------------TDWPLLERIAR-SDKPVVASTAGARRE 148 (350)
T ss_dssp -----SHH----HHHHHHHTT------CCEEEECSSST---------------TCHHHHHHHHT-SCSCEEEECTTCCHH
T ss_pred -----CHH----HHHHHHHcC------CCEEEECcccc---------------cCHHHHHHHHh-hCCcEEEECCCCCHH
Confidence 121 245567788 88888755322 12345565654 68899999887 765
Q ss_pred H---HHHHHHcCCCcEEE
Q 025135 186 L---GIQALAEDGADLVA 200 (257)
Q Consensus 186 ~---a~~~l~~g~~D~V~ 200 (257)
+ |.+.|.+.+.+++.
T Consensus 149 Ei~~Ave~i~~~g~~viL 166 (350)
T 3g8r_A 149 DIDKVVSFMLHRGKDLTI 166 (350)
T ss_dssp HHHHHHHHHHTTTCCEEE
T ss_pred HHHHHHHHHHHcCCCEEE
Confidence 4 55556665578665
No 494
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=81.79 E-value=5.6 Score=33.43 Aligned_cols=52 Identities=25% Similarity=0.291 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEcc
Q 025135 25 DQYRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSP 100 (257)
Q Consensus 25 ~~f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~ 100 (257)
++-.++++.|.++|.|.|.-.-|.+ .+||.. .|-++.+|+.+++ +++||.+.
T Consensus 146 eei~~a~~ia~~aGADfVKTSTGf~----------------~~~gAt-------~edv~lm~~~v~~-~v~VKaaG 197 (231)
T 3ndo_A 146 PLLADVCRVARDAGADFVKTSTGFH----------------PSGGAS-------VQAVEIMARTVGE-RLGVKASG 197 (231)
T ss_dssp HHHHHHHHHHHHTTCSEEECCCSCC----------------TTCSCC-------HHHHHHHHHHHTT-TSEEEEES
T ss_pred HHHHHHHHHHHHHCcCEEEcCCCCC----------------CCCCCC-------HHHHHHHHHHhCC-CceEEEeC
Confidence 4556888999999999999655431 134532 2446666777774 79999995
No 495
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=81.75 E-value=8.9 Score=32.02 Aligned_cols=80 Identities=16% Similarity=0.125 Sum_probs=46.1
Q ss_pred HHHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCC
Q 025135 27 YRQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLD 106 (257)
Q Consensus 27 f~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~ 106 (257)
-.++++.|.++|.|.|.-.-|.+ ...+=++..| .||......+++.++++. +|+ .++||.+..
T Consensus 130 i~~a~~ia~eaGADfVKTSTGf~--~~~~~~~~~~-----~~gAt~~dv~lm~~~i~~----~g~-~v~vKaaGG----- 192 (226)
T 1vcv_A 130 RYTLYDIIAEAGAHFIKSSTGFA--EEAYAARQGN-----PVHSTPERAAAIARYIKE----KGY-RLGVKMAGG----- 192 (226)
T ss_dssp HHHHHHHHHHHTCSEEECCCSCC--CHHHHHHTTC-----CSSCCHHHHHHHHHHHHH----HTC-CCEEEEESS-----
T ss_pred HHHHHHHHHHcCCCEEEeCCCCC--ccccccccCC-----CCCCCHHHHHHHHHHHHH----hCC-CceEEEeCC-----
Confidence 45788899999999999665441 0000001111 244333334555544442 564 689999853
Q ss_pred CCCCCcHHHHHHHHHHHHhcC
Q 025135 107 ATDSDPLGLGLAVIQGLNKLQ 127 (257)
Q Consensus 107 ~~~~~~~~~~~~l~~~L~~~G 127 (257)
.-+.+++..+.+.. ++|
T Consensus 193 ---irt~~~al~~i~a~-~~G 209 (226)
T 1vcv_A 193 ---IRTREQAKAIVDAI-GWG 209 (226)
T ss_dssp ---CCSHHHHHHHHHHH-CSC
T ss_pred ---CCCHHHHHHHHHHH-HCC
Confidence 13477777777766 477
No 496
>2vxn_A Triosephosphate isomerase; fatty acid biosynthesis, transition state analogue, glycolysis, pentose shunt, gluconeogenesis, TIM, glycosome; HET: PGH PGA; 0.82A {Leishmania mexicana} PDB: 1if2_A* 1qds_A 1n55_A* 2y61_A 2y62_A 2y63_A 1amk_A 1tpf_A 1iig_A 1ag1_O* 1iih_A 1tpd_A 1trd_A* 2v5l_A 4tim_A* 5tim_A 6tim_A*
Probab=81.75 E-value=3.2 Score=35.37 Aligned_cols=43 Identities=9% Similarity=0.086 Sum_probs=37.7
Q ss_pred CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCchHHHHHH
Q 025135 173 QGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNPDLVLRFK 216 (257)
Q Consensus 173 ~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~ 216 (257)
+++|+.+|+++++.+.+++..-.+|.+.+|++.+. .+|..-+.
T Consensus 206 ~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~-~~F~~Ii~ 248 (251)
T 2vxn_A 206 KLRILYGGSVNAANAATLYAKPDINGFLVGGASLK-PEFRDIID 248 (251)
T ss_dssp HCEEEEESSCCTTTHHHHHTSTTCCEEEESGGGGS-TTHHHHHH
T ss_pred cccEEEcCCcCHhHHHHHhcCCCCCeeeecHHHHH-HHHHHHHH
Confidence 36799989999999999999999999999999999 87776553
No 497
>2v5b_A Triosephosphate isomerase; TIM, unfolding, monotctim, glycosome, gluconeogenesis, lipid synthesis, monomeric mutant, glycolysis, pentose shunt; 2.00A {Trypanosoma cruzi}
Probab=81.45 E-value=4.1 Score=34.53 Aligned_cols=43 Identities=14% Similarity=0.122 Sum_probs=37.3
Q ss_pred CCcEEEeCCCCHHHHHHHHHcCCCcEEEechHHhhCchHHHHHH
Q 025135 173 QGTFICSGGFTRELGIQALAEDGADLVAYGRLFISNPDLVLRFK 216 (257)
Q Consensus 173 ~~pvi~~G~it~~~a~~~l~~g~~D~V~igR~~iadP~l~~k~~ 216 (257)
+++|+.+|+++++.+.+++....+|.+.+|++.+. .+|..-+.
T Consensus 199 ~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgASL~-~~F~~Ii~ 241 (244)
T 2v5b_A 199 QLRILYGGSVTAKNARTLYQMRDINGFLVGGASLK-PEFVEIIE 241 (244)
T ss_dssp HCEEEECSCCCHHHHHHHHTSTTCCEEEESGGGSS-TTHHHHHH
T ss_pred cccEEEcCCCCHhHHHHHhcCCCCCeeeechHHHH-HHHHHHHH
Confidence 36788888899999999999999999999999998 77765443
No 498
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=81.44 E-value=5.6 Score=34.03 Aligned_cols=47 Identities=23% Similarity=0.278 Sum_probs=33.6
Q ss_pred HHHHHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCC-chhhHhhHHHHHHHHHHHHhCCCeEEEEEcc
Q 025135 28 RQAALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGG-SIENRCRFLMQLVREVIVAIGADRVGVRMSP 100 (257)
Q Consensus 28 ~~AA~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGG-s~enR~r~~~eiv~aiR~~vg~~~v~vrls~ 100 (257)
.+|++.|.++|.|.|.-.-|.+ .|| ++ |-++.+|+.+|+ +++||.++
T Consensus 176 ~~A~~ia~eaGADfVKTSTGf~-----------------~~GAT~--------edV~lm~~~vg~-~v~VKaAG 223 (260)
T 3r12_A 176 IAACVISKLAGAHFVKTSTGFG-----------------TGGATA--------EDVHLMKWIVGD-EMGVKASG 223 (260)
T ss_dssp HHHHHHHHHTTCSEEECCCSSS-----------------SCCCCH--------HHHHHHHHHHCT-TSEEEEES
T ss_pred HHHHHHHHHhCcCEEEcCCCCC-----------------CCCCCH--------HHHHHHHHHhCC-CceEEEeC
Confidence 5788899999999999664431 234 33 336666777775 79999995
No 499
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=81.41 E-value=11 Score=35.22 Aligned_cols=39 Identities=13% Similarity=0.008 Sum_probs=33.1
Q ss_pred HHHHHHHHHHhCCcEEEeCCCCHHHHHHHHHcCCCcEEEe
Q 025135 162 AQLLRTWRRSYQGTFICSGGFTRELGIQALAEDGADLVAY 201 (257)
Q Consensus 162 ~~~~~~ir~~~~~pvi~~G~it~~~a~~~l~~g~~D~V~i 201 (257)
+..++.+|+.+++||++-|..++++|..+.+.| +|+|.+
T Consensus 332 ~~~i~~lr~~~~~PvivKgv~~~e~A~~a~~aG-ad~I~v 370 (511)
T 1kbi_A 332 WKDIEELKKKTKLPIVIKGVQRTEDVIKAAEIG-VSGVVL 370 (511)
T ss_dssp HHHHHHHHHHCSSCEEEEEECSHHHHHHHHHTT-CSEEEE
T ss_pred HHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHcC-CCEEEE
Confidence 456788999999999887555899999998887 999998
No 500
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=81.34 E-value=34 Score=35.32 Aligned_cols=139 Identities=14% Similarity=0.067 Sum_probs=79.4
Q ss_pred HHHHHHcCCCEEEecccccchhhhcCCCCcCCcCCCCCCchhhHhhHHHHHHHHHHHHhCCCeEEEEEccCCCCCCC--C
Q 025135 31 ALNAIQAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSIENRCRFLMQLVREVIVAIGADRVGVRMSPAIDHLDA--T 108 (257)
Q Consensus 31 A~~a~~aGfDgVEIh~a~GyLl~qFlSp~~N~R~D~yGGs~enR~r~~~eiv~aiR~~vg~~~v~vrls~~~~~~~~--~ 108 (257)
.++|.++|.|.|-|..+. |. .+.....++.+++. |. .+..-++...+..+. .
T Consensus 633 v~~a~~~Gvd~irif~~~--------sd----------------~~~~~~~~~~~~e~-g~-~~~~~i~~~~~~~~pe~~ 686 (1150)
T 3hbl_A 633 VQESAKAGIDVFRIFDSL--------NW----------------VDQMKVANEAVQEA-GK-ISEGTICYTGDILNPERS 686 (1150)
T ss_dssp HHHHHHTTCCEEEEECTT--------CC----------------GGGGHHHHHHHHHT-TC-EEEEEEECCSCTTCTTTC
T ss_pred HHHHHhCCcCEEEEEeeC--------CH----------------HHHHHHHHHHHHHH-hh-heeEEEeecccccChhhc
Confidence 345567899999886553 11 22234556666654 43 222222322111111 1
Q ss_pred CCCcHHHHHHHHHHHHhcCCccCCceeEEEeeCCCcccCCCcCCCCCCCchhHHHHHHHHHHHhCCcEEEeCCCC----H
Q 025135 109 DSDPLGLGLAVIQGLNKLQIDQGAKLTYLHVTQPRYTAYGQTESGRPGTEDEEAQLLRTWRRSYQGTFICSGGFT----R 184 (257)
Q Consensus 109 ~~~~~~~~~~l~~~L~~~G~~~~~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~it----~ 184 (257)
...+.+.+.++++.+.++| ++.|.+.... + ...+......++.+++.+++||-.=..-| .
T Consensus 687 ~~~~~~~~~~~a~~~~~~G------a~~i~l~Dt~----G------~~~P~~~~~lv~~l~~~~~~~i~~H~Hnt~G~a~ 750 (1150)
T 3hbl_A 687 NIYTLEYYVKLAKELEREG------FHILAIKDMA----G------LLKPKAAYELIGELKSAVDLPIHLHTHDTSGNGL 750 (1150)
T ss_dssp SSSSHHHHHHHHHHHHHTT------CSEEEEEETT----C------CCCHHHHHHHHHHHHHHCCSCEEEEECBTTSCHH
T ss_pred CCCCHHHHHHHHHHHHHcC------CCeeeEcCcc----C------CCCHHHHHHHHHHHHHhcCCeEEEEeCCCCcHHH
Confidence 1245788899999999999 7777664321 1 11233445677788988888865422212 5
Q ss_pred HHHHHHHHcCCCcEEEechHHh----hCchHH
Q 025135 185 ELGIQALAEDGADLVAYGRLFI----SNPDLV 212 (257)
Q Consensus 185 ~~a~~~l~~g~~D~V~igR~~i----adP~l~ 212 (257)
..+..+++.| ||.|-.+=.-+ .||.+-
T Consensus 751 An~laA~~aG-a~~vD~ai~GlG~~~gn~~lE 781 (1150)
T 3hbl_A 751 LTYKQAIDAG-VDIIDTAVASMSGLTSQPSAN 781 (1150)
T ss_dssp HHHHHHHHTT-CSEEEEBCGGGCSBTSCCBHH
T ss_pred HHHHHHHHhC-CCEEEEeccccCCCCCCccHH
Confidence 6778899988 88886554444 466543
Done!