Query 025136
Match_columns 257
No_of_seqs 331 out of 1766
Neff 6.7
Searched_HMMs 46136
Date Fri Mar 29 03:00:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025136.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025136hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2738 Putative methionine am 100.0 1.7E-55 3.7E-60 391.8 17.9 190 68-257 69-263 (369)
2 PLN03158 methionine aminopepti 100.0 1E-46 2.2E-51 355.5 22.6 190 68-257 90-284 (396)
3 COG0024 Map Methionine aminope 100.0 1.3E-35 2.8E-40 264.2 17.9 149 109-257 4-154 (255)
4 PRK12897 methionine aminopepti 100.0 1.3E-34 2.9E-39 257.5 18.6 149 108-256 2-150 (248)
5 PRK12318 methionine aminopepti 100.0 5.4E-34 1.2E-38 259.8 20.8 148 109-256 42-191 (291)
6 PRK07281 methionine aminopepti 100.0 5.7E-34 1.2E-38 259.0 19.1 150 108-257 2-182 (286)
7 TIGR00500 met_pdase_I methioni 100.0 2.2E-33 4.8E-38 248.7 19.2 148 109-256 2-149 (247)
8 PRK12896 methionine aminopepti 100.0 4.7E-33 1E-37 247.3 18.7 151 106-256 6-156 (255)
9 COG0006 PepP Xaa-Pro aminopept 100.0 8.6E-33 1.9E-37 259.9 16.2 153 99-256 143-295 (384)
10 PRK05716 methionine aminopepti 100.0 3.8E-32 8.2E-37 241.1 18.7 149 108-256 3-151 (252)
11 PRK09795 aminopeptidase; Provi 100.0 8.7E-32 1.9E-36 251.3 17.7 149 103-256 120-273 (361)
12 PRK10879 proline aminopeptidas 100.0 7.5E-32 1.6E-36 258.1 16.7 148 104-256 167-315 (438)
13 TIGR02993 ectoine_eutD ectoine 100.0 1.7E-31 3.7E-36 252.2 15.3 156 99-256 147-303 (391)
14 cd01090 Creatinase Creatine am 100.0 2.7E-30 5.9E-35 227.6 17.6 141 116-256 1-142 (228)
15 PRK15173 peptidase; Provisiona 100.0 2E-30 4.4E-35 239.4 16.9 153 98-256 83-235 (323)
16 PRK14575 putative peptidase; P 100.0 2.9E-30 6.3E-35 245.0 17.2 158 93-256 161-318 (406)
17 PRK14576 putative endopeptidas 100.0 5.4E-30 1.2E-34 243.1 16.9 153 98-256 165-317 (405)
18 cd01086 MetAP1 Methionine Amin 100.0 1.8E-29 3.9E-34 222.2 17.9 141 116-256 1-141 (238)
19 cd01087 Prolidase Prolidase. E 100.0 1.6E-29 3.5E-34 223.5 17.4 135 116-256 1-136 (243)
20 PRK13607 proline dipeptidase; 100.0 1.5E-29 3.3E-34 242.5 14.7 148 102-256 153-301 (443)
21 cd01092 APP-like Similar to Pr 100.0 2.1E-28 4.5E-33 210.0 17.1 136 116-256 1-136 (208)
22 TIGR00495 crvDNA_42K 42K curve 100.0 2.4E-28 5.3E-33 230.6 18.1 149 108-257 11-172 (389)
23 PF00557 Peptidase_M24: Metall 100.0 3.3E-27 7E-32 203.1 16.2 134 117-256 1-135 (207)
24 cd01089 PA2G4-like Related to 99.9 4.8E-27 1E-31 206.5 16.6 139 116-256 1-153 (228)
25 PTZ00053 methionine aminopepti 99.9 1E-26 2.3E-31 222.5 18.8 143 106-257 148-297 (470)
26 cd01066 APP_MetAP A family inc 99.9 2.6E-26 5.6E-31 194.5 16.0 135 116-256 1-135 (207)
27 TIGR00501 met_pdase_II methion 99.9 3.1E-26 6.8E-31 209.2 17.1 134 113-257 2-138 (295)
28 cd01085 APP X-Prolyl Aminopept 99.9 8.6E-26 1.9E-30 198.7 15.8 134 118-256 6-145 (224)
29 PRK08671 methionine aminopepti 99.9 2E-25 4.3E-30 203.4 16.9 132 115-257 1-135 (291)
30 cd01088 MetAP2 Methionine Amin 99.9 5.9E-25 1.3E-29 200.3 16.2 131 116-257 1-134 (291)
31 KOG2737 Putative metallopeptid 99.9 6.3E-25 1.4E-29 201.7 12.4 149 102-254 177-330 (492)
32 cd01091 CDC68-like Related to 99.9 1.9E-23 4.2E-28 185.9 15.9 139 116-256 1-152 (243)
33 KOG2414 Putative Xaa-Pro amino 99.9 1.8E-23 3.9E-28 193.7 11.4 148 103-255 221-371 (488)
34 KOG2776 Metallopeptidase [Gene 99.5 5E-14 1.1E-18 129.3 12.2 147 108-256 13-173 (398)
35 KOG1189 Global transcriptional 99.5 7.7E-14 1.7E-18 137.5 12.7 162 90-256 117-290 (960)
36 KOG2775 Metallopeptidase [Gene 99.4 1.8E-12 3.8E-17 117.0 11.7 138 111-257 80-224 (397)
37 KOG2413 Xaa-Pro aminopeptidase 99.3 1.2E-11 2.5E-16 120.2 10.5 142 103-248 300-451 (606)
38 COG5406 Nucleosome binding fac 99.0 1.5E-09 3.3E-14 105.9 8.8 160 94-256 154-331 (1001)
39 cd01066 APP_MetAP A family inc 97.8 0.00057 1.2E-08 57.3 12.2 102 117-220 102-204 (207)
40 cd01092 APP-like Similar to Pr 97.6 0.0012 2.7E-08 56.2 11.5 100 117-219 103-204 (208)
41 PRK05716 methionine aminopepti 97.4 0.0022 4.8E-08 56.7 11.3 100 118-220 119-240 (252)
42 TIGR00500 met_pdase_I methioni 97.3 0.0046 9.9E-08 54.6 11.8 100 118-220 117-238 (247)
43 cd01086 MetAP1 Methionine Amin 97.3 0.0051 1.1E-07 53.9 12.0 100 118-220 109-230 (238)
44 PRK15173 peptidase; Provisiona 97.2 0.0045 9.8E-08 57.4 11.8 101 118-219 203-305 (323)
45 PRK14575 putative peptidase; P 97.2 0.0055 1.2E-07 58.6 11.9 99 118-220 286-389 (406)
46 PRK09795 aminopeptidase; Provi 97.1 0.008 1.7E-07 56.3 12.6 105 112-219 235-341 (361)
47 cd01090 Creatinase Creatine am 97.1 0.0087 1.9E-07 52.7 11.8 100 118-220 110-220 (228)
48 PRK14576 putative endopeptidas 97.1 0.0086 1.9E-07 57.2 12.3 99 118-219 285-387 (405)
49 PRK12897 methionine aminopepti 97.0 0.0062 1.3E-07 54.1 10.5 100 118-220 118-239 (248)
50 cd01091 CDC68-like Related to 97.0 0.0093 2E-07 53.2 11.0 102 117-220 119-234 (243)
51 TIGR02993 ectoine_eutD ectoine 97.0 0.0083 1.8E-07 57.0 11.2 98 118-219 271-373 (391)
52 PRK08671 methionine aminopepti 97.0 0.015 3.2E-07 53.2 12.4 97 118-219 102-205 (291)
53 PRK12318 methionine aminopepti 97.0 0.01 2.2E-07 54.4 11.3 86 118-206 159-247 (291)
54 PRK12896 methionine aminopepti 96.9 0.017 3.6E-07 51.2 11.7 99 119-220 125-246 (255)
55 cd01088 MetAP2 Methionine Amin 96.8 0.017 3.7E-07 52.8 11.4 97 118-219 101-204 (291)
56 PRK07281 methionine aminopepti 96.8 0.015 3.2E-07 53.2 10.7 85 118-205 149-237 (286)
57 cd01087 Prolidase Prolidase. E 96.7 0.019 4E-07 50.6 11.0 101 118-219 104-234 (243)
58 PF00557 Peptidase_M24: Metall 96.7 0.012 2.5E-07 50.3 8.8 97 119-218 104-205 (207)
59 PLN03158 methionine aminopepti 96.5 0.029 6.3E-07 53.7 11.3 84 119-205 252-339 (396)
60 cd01089 PA2G4-like Related to 96.3 0.048 1E-06 47.8 10.5 99 117-220 120-220 (228)
61 COG0006 PepP Xaa-Pro aminopept 96.2 0.066 1.4E-06 50.5 11.8 110 104-220 251-367 (384)
62 TIGR00501 met_pdase_II methion 96.1 0.038 8.3E-07 50.6 9.4 97 119-218 106-207 (295)
63 COG0024 Map Methionine aminope 96.0 0.089 1.9E-06 47.5 10.9 96 117-213 120-218 (255)
64 TIGR00495 crvDNA_42K 42K curve 95.7 0.098 2.1E-06 50.0 10.5 100 118-218 139-248 (389)
65 PRK10879 proline aminopeptidas 95.4 0.21 4.5E-06 48.3 11.6 100 119-219 284-410 (438)
66 PTZ00053 methionine aminopepti 95.1 0.18 3.9E-06 49.4 10.1 99 118-218 264-375 (470)
67 cd01085 APP X-Prolyl Aminopept 93.4 1.7 3.7E-05 38.1 12.0 95 121-219 115-215 (224)
68 PRK13607 proline dipeptidase; 93.1 1.1 2.3E-05 43.6 11.1 88 120-207 271-391 (443)
69 KOG2738 Putative methionine am 86.0 4.6 0.0001 37.5 8.3 82 117-201 229-314 (369)
70 KOG1189 Global transcriptional 77.7 9.8 0.00021 39.4 7.9 97 119-220 259-368 (960)
71 cd01666 TGS_DRG_C TGS_DRG_C: 74.8 11 0.00025 27.5 5.7 52 137-199 21-73 (75)
72 COG5406 Nucleosome binding fac 66.1 22 0.00048 36.3 7.3 82 114-203 299-385 (1001)
73 PF00254 FKBP_C: FKBP-type pep 60.2 22 0.00047 26.1 4.8 51 188-247 2-59 (94)
74 PRK01490 tig trigger factor; P 58.2 34 0.00074 32.8 7.0 57 140-220 131-191 (435)
75 TIGR00115 tig trigger factor. 49.1 57 0.0012 30.9 6.9 58 140-220 119-180 (408)
76 cd04938 TGS_Obg-like TGS_Obg-l 45.2 40 0.00086 24.6 4.0 47 137-199 28-74 (76)
77 PF05184 SapB_1: Saposin-like 38.3 57 0.0012 19.8 3.5 34 122-155 3-36 (39)
78 PRK05423 hypothetical protein; 35.8 52 0.0011 25.4 3.4 27 129-155 44-70 (104)
79 PF04363 DUF496: Protein of un 35.7 1.1E+02 0.0025 23.2 5.1 37 118-155 27-63 (95)
80 PF03477 ATP-cone: ATP cone do 33.3 35 0.00076 24.9 2.2 35 125-159 40-74 (90)
81 COG0544 Tig FKBP-type peptidyl 32.8 84 0.0018 30.7 5.2 45 140-208 131-175 (441)
82 KOG2414 Putative Xaa-Pro amino 31.8 2.7E+02 0.0059 27.3 8.2 104 110-220 334-463 (488)
83 KOG2775 Metallopeptidase [Gene 31.3 78 0.0017 29.7 4.4 35 223-257 86-120 (397)
84 TIGR03516 ppisom_GldI peptidyl 28.8 1.2E+02 0.0025 25.8 4.9 52 188-248 83-140 (177)
85 cd01669 TGS_Ygr210_C TGS_Ygr21 27.3 1.7E+02 0.0037 21.3 4.9 48 137-199 27-74 (76)
86 PRK15131 mannose-6-phosphate i 25.2 3.4E+02 0.0073 26.0 7.8 46 18-64 69-114 (389)
87 KOG2737 Putative metallopeptid 24.9 1.7E+02 0.0038 28.3 5.6 26 130-155 312-337 (492)
88 PF10415 FumaraseC_C: Fumarase 24.8 94 0.002 21.2 2.9 34 118-151 10-48 (55)
89 PRK05728 DNA polymerase III su 24.6 3.8E+02 0.0082 21.6 8.4 105 118-231 14-122 (142)
90 PF04355 SmpA_OmlA: SmpA / Oml 23.6 53 0.0011 23.0 1.6 19 132-150 7-25 (71)
91 PRK00464 nrdR transcriptional 22.7 2.2E+02 0.0048 23.7 5.3 39 123-161 85-123 (154)
92 PF09506 Salt_tol_Pase: Glucos 22.5 3.3E+02 0.0071 26.0 6.9 128 111-239 97-280 (381)
93 COG1163 DRG Predicted GTPase [ 22.2 2.3E+02 0.005 26.9 5.8 48 139-199 312-362 (365)
94 COG3001 Uncharacterized protei 22.1 1.5E+02 0.0033 27.1 4.4 41 190-231 201-241 (286)
95 TIGR02399 salt_tol_Pase glucos 21.3 3.5E+02 0.0076 25.9 6.8 128 111-239 103-285 (389)
96 PF13798 PCYCGC: Protein of un 21.2 2.2E+02 0.0048 24.0 5.0 46 118-163 109-154 (158)
No 1
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.7e-55 Score=391.76 Aligned_cols=190 Identities=64% Similarity=1.081 Sum_probs=181.6
Q ss_pred CCCCccCCCCccCCCCCCCCCCCCCCCCccCCCC----CCCcC-CCCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 025136 68 PNRRRKRLRPGKVSPHRPVPDHIPRPPYVNSQKP----IGIVS-GPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGIT 142 (257)
Q Consensus 68 ~~~~~~~~~~g~~s~~~~vp~~i~~P~y~~~~~~----~~~~~-~R~VKs~~EIe~mR~A~~ia~~al~~~~~~ikpGvT 142 (257)
.|.++++||||.+||+|.||+||++|+|+.++.+ +.... ...|++++||+.||+||++++++++.+...++||+|
T Consensus 69 ~~~~~g~Lr~~pvsprr~VP~hI~rPdya~~g~s~se~~~~~s~~i~i~~~e~ie~mR~ac~LarevLd~Aa~~v~PgvT 148 (369)
T KOG2738|consen 69 KFRFTGPLRPGPVSPRRPVPDHIPRPDYADSGVSLSEQPEISSNEIKILDPEGIEGMRKACRLAREVLDYAATLVRPGVT 148 (369)
T ss_pred cccccCCccccCCCCCCcCCccCCCCchhhcCCcccccccccccceeccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCcc
Confidence 5899999999999999999999999999999764 22222 457899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCCCCCCCCCCEEEEEecceeCcEEEeeeeEEEcCCCC
Q 025136 143 TDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVD 222 (257)
Q Consensus 143 e~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~~~Hg~p~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~vG~~~ 222 (257)
++|||+.+|++++++|+||+||||++||+++|+|+|+++|||+|+.|+|++||||+||++++++|||+|+++||++|+++
T Consensus 149 TdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSVNEviCHGIPD~RpLedGDIvNiDVtvY~~GyHGDlneTffvG~Vd 228 (369)
T KOG2738|consen 149 TDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSVNEVICHGIPDSRPLEDGDIVNIDVTVYLNGYHGDLNETFFVGNVD 228 (369)
T ss_pred HHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcchhheeecCCCCcCcCCCCCEEeEEEEEEeccccCccccceEeeccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCHhHHHhhhC
Q 025136 223 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQ 257 (257)
Q Consensus 223 ~e~~~l~~~~~ea~~~ai~~lkPG~~~~dI~~aI~ 257 (257)
++.++|+++++||++.||+.+|||+++++|++.|+
T Consensus 229 e~~k~LVkvT~EcL~kaI~~~kpGv~freiG~iI~ 263 (369)
T KOG2738|consen 229 EKAKKLVKVTRECLEKAIAIVKPGVSFREIGNIIQ 263 (369)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHH
Confidence 99999999999999999999999999999999885
No 2
>PLN03158 methionine aminopeptidase; Provisional
Probab=100.00 E-value=1e-46 Score=355.52 Aligned_cols=190 Identities=51% Similarity=0.895 Sum_probs=182.7
Q ss_pred CCCCccCCCCccCCCCCCCCCCCCCCCCccCCCCC-----CCcCCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 025136 68 PNRRRKRLRPGKVSPHRPVPDHIPRPPYVNSQKPI-----GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGIT 142 (257)
Q Consensus 68 ~~~~~~~~~~g~~s~~~~vp~~i~~P~y~~~~~~~-----~~~~~R~VKs~~EIe~mR~A~~ia~~al~~~~~~ikpGvT 142 (257)
.|+++++||||.+||++.||+||++|+|+.++.+. .+.+.|.|||++||+.||+|+++++++++.+.+.++||+|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~p~~i~~p~y~~~~~~~~~~~~~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~irpGvT 169 (396)
T PLN03158 90 DFDWTGPLRPYPISPRRVVPDHIPKPDWALDGTPKIEPNSDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKPGVT 169 (396)
T ss_pred CCCCCcccccCCCCCCCCCCccCCCCccccCCCCccccccccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCC
Confidence 48999999999999999999999999999886532 3567899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCCCCCCCCCCEEEEEecceeCcEEEeeeeEEEcCCCC
Q 025136 143 TDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVD 222 (257)
Q Consensus 143 e~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~~~Hg~p~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~vG~~~ 222 (257)
|.||++.++++++++|++|++++|.+||+++|+|.|+++||++|++++|++||+|+||++++++||++|++|||++|+++
T Consensus 170 e~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svcts~N~~i~Hgip~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~VG~~~ 249 (396)
T PLN03158 170 TDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVTVYYKGCHGDLNETFFVGNVD 249 (396)
T ss_pred HHHHHHHHHHHHHHcCCccccccccCCCceeeecccccccCCCCCCccCCCCCEEEEEEeEEECCEEEeEEeEEEcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCHhHHHhhhC
Q 025136 223 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQ 257 (257)
Q Consensus 223 ~e~~~l~~~~~ea~~~ai~~lkPG~~~~dI~~aI~ 257 (257)
++++++++++++|++++++++|||++++||+++|+
T Consensus 250 ~e~~~l~e~~~eal~~aI~~vkPGv~~~dI~~~i~ 284 (396)
T PLN03158 250 EASRQLVKCTYECLEKAIAIVKPGVRYREVGEVIN 284 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999874
No 3
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.3e-35 Score=264.17 Aligned_cols=149 Identities=43% Similarity=0.790 Sum_probs=143.6
Q ss_pred CcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCC-
Q 025136 109 EVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD- 187 (257)
Q Consensus 109 ~VKs~~EIe~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~~~Hg~p~- 187 (257)
.+||++||+.||+||+|++++++.+.+.++||+|+.||+..+++++.++|++|++++|.+||..+|+|.|+++|||+|+
T Consensus 4 ~ikt~~eiek~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~~~ciSvNe~v~HgiP~d 83 (255)
T COG0024 4 SIKTPEEIEKMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIREKGAYPAFLGYKGFPFPTCISVNEVVAHGIPGD 83 (255)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCceehhccCcCCCcceEeehhheeeecCCCC
Confidence 4899999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCEEEEEecceeCcEEEeeeeEEEcCCCC-HHHHHHHHHHHHHHHHHHHHcCCCCCHhHHHhhhC
Q 025136 188 SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVD-DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQ 257 (257)
Q Consensus 188 ~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~vG~~~-~e~~~l~~~~~ea~~~ai~~lkPG~~~~dI~~aI~ 257 (257)
+++|++||+|+||+|+.++||++|.++||.+|+.+ +..++|.+++++|++++|+.+|||++++||+++||
T Consensus 84 ~~vlk~GDiv~IDvg~~~dG~~~Dsa~T~~vg~~~~~~~~~L~~~t~eal~~~I~~vkpG~~l~~Ig~aIq 154 (255)
T COG0024 84 KKVLKEGDIVKIDVGAHIDGYIGDTAITFVVGEVSDEDAKRLLEATKEALYAGIEAVKPGARLGDIGRAIQ 154 (255)
T ss_pred CcccCCCCEEEEEEEEEECCeeeeEEEEEECCCCChHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHH
Confidence 57899999999999999999999999999999766 47777999999999999999999999999999985
No 4
>PRK12897 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=1.3e-34 Score=257.51 Aligned_cols=149 Identities=36% Similarity=0.593 Sum_probs=143.1
Q ss_pred CCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCC
Q 025136 108 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD 187 (257)
Q Consensus 108 R~VKs~~EIe~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~~~Hg~p~ 187 (257)
..|||++||++||+|+++++++++++.+.++||+||.||++.++..+.++|+.....+|.+|+.++|+|+|+..+|+.|+
T Consensus 2 ~~iKs~~EI~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~i~~g~n~~~~H~~p~ 81 (248)
T PRK12897 2 ITIKTKNEIDLMHESGKLLASCHREIAKIMKPGITTKEINTFVEAYLEKHGATSEQKGYNGYPYAICASVNDEMCHAFPA 81 (248)
T ss_pred ceeCCHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccCCCCcceEeccCCEeecCCCC
Confidence 36999999999999999999999999999999999999999999999999998765567789989999999999999999
Q ss_pred CCCCCCCCEEEEEecceeCcEEEeeeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHhHHHhhh
Q 025136 188 SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTI 256 (257)
Q Consensus 188 ~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~dI~~aI 256 (257)
+++|++||+|++|+++.++||++|++|||++|+++++++++|+++++|++++++++|||++++||++++
T Consensus 82 ~~~l~~Gd~V~iD~g~~~~GY~sD~tRT~~vG~~s~~~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~ 150 (248)
T PRK12897 82 DVPLTEGDIVTIDMVVNLNGGLSDSAWTYRVGKVSDEAEKLLLVAENALYKGIDQAVIGNRVGDIGYAI 150 (248)
T ss_pred CcccCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999886
No 5
>PRK12318 methionine aminopeptidase; Provisional
Probab=100.00 E-value=5.4e-34 Score=259.81 Aligned_cols=148 Identities=36% Similarity=0.722 Sum_probs=142.1
Q ss_pred CcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC--CCCceeeecCCCCcccCCC
Q 025136 109 EVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYG--GFPKSVCTSVNECICHGIP 186 (257)
Q Consensus 109 ~VKs~~EIe~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~--gfp~~v~sg~n~~~~Hg~p 186 (257)
.|||++||+.||+|+++++++++++.+.++||+||.||++.+...+.+.|+.+++++|. +|++++|+|.|+.++|+.|
T Consensus 42 ~IKs~~EIe~~R~Aa~I~~~a~~a~~~~irpG~tE~Eiaa~~~~~~~~~G~~~~~~~~~~~~f~~~v~~g~n~~~~H~~p 121 (291)
T PRK12318 42 IIKTPEQIEKIRKACQVTARILDALCEAAKEGVTTNELDELSRELHKEYNAIPAPLNYGSPPFPKTICTSLNEVICHGIP 121 (291)
T ss_pred EECCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCccccccCCCCCCcceEeeccceeecCCC
Confidence 59999999999999999999999999999999999999999999999999988777774 5899999999999999999
Q ss_pred CCCCCCCCCEEEEEecceeCcEEEeeeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHhHHHhhh
Q 025136 187 DSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTI 256 (257)
Q Consensus 187 ~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~dI~~aI 256 (257)
++++|++||+|++|+++.++||++|++|||++|+++++++++|++++++++++++++|||++++||++++
T Consensus 122 ~~~~l~~GD~V~vD~g~~~~GY~aDitRT~~vG~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~ 191 (291)
T PRK12318 122 NDIPLKNGDIMNIDVSCIVDGYYGDCSRMVMIGEVSEIKKKVCQASLECLNAAIAILKPGIPLYEIGEVI 191 (291)
T ss_pred CCCccCCCCEEEEEEeEEECcEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999886
No 6
>PRK07281 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=5.7e-34 Score=259.01 Aligned_cols=150 Identities=25% Similarity=0.463 Sum_probs=142.7
Q ss_pred CCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCC----CCCCceeeecCCCCccc
Q 025136 108 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGY----GGFPKSVCTSVNECICH 183 (257)
Q Consensus 108 R~VKs~~EIe~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y----~gfp~~v~sg~n~~~~H 183 (257)
..+||++||+.||+|++++++++.++.+.++||+||.||++.+...+.+.|+.+..+++ .+||+++|+|.|+.++|
T Consensus 2 ~~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~pG~te~ei~~~~~~~~~~~g~~~~~~G~~~~~~~f~~~v~~G~n~~~~H 81 (286)
T PRK07281 2 ITLKSAREIEAMDRAGDFLASIHIGLRDLIKPGVDMWEVEEYVRRRCKEENVLPLQIGVDGAMMDYPYATCCGLNDEVAH 81 (286)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCcccccCCCCcccCCCcceEEeccccccC
Confidence 47999999999999999999999999999999999999999999999999998877665 45999999999999999
Q ss_pred CCCCCCCCCCCCEEEEEecc---------------------------eeCcEEEeeeeEEEcCCCCHHHHHHHHHHHHHH
Q 025136 184 GIPDSRALEDGDTINIDVTV---------------------------YLNGYHGDTSATFFCGDVDDEARNLVKVTKDCL 236 (257)
Q Consensus 184 g~p~~r~L~~GDiV~iDvg~---------------------------~~~GY~aD~tRT~~vG~~~~e~~~l~~~~~ea~ 236 (257)
+.|++++|++||+|++|+++ .|+||++|++|||++|+++++++++|+++++|+
T Consensus 82 ~~p~~~~l~~Gd~v~iD~g~~~~~~~y~~d~~~~~~~~~~~~~~~~~~~~gy~~D~~rT~~vG~~~~~~~~l~~~~~ea~ 161 (286)
T PRK07281 82 AFPRHYILKEGDLLKVDMVLSEPLDKSIVDVSKLNFDNVEQMKKYTESYRGGLADSCWAYAVGTPSDEVKNLMDVTKEAM 161 (286)
T ss_pred CCCCCcCcCCCCEEEEEecccccccccccccccccccccccccccccccCCEEeeeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999997 489999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCHhHHHhhhC
Q 025136 237 HKAISVCAPGMEYKKIGKTIQ 257 (257)
Q Consensus 237 ~~ai~~lkPG~~~~dI~~aI~ 257 (257)
+++++++|||++++||+++++
T Consensus 162 ~~ai~~~kpG~~~~di~~a~~ 182 (286)
T PRK07281 162 YRGIEQAVVGNRIGDIGAAIQ 182 (286)
T ss_pred HHHHHHhcCCCcHHHHHHHHH
Confidence 999999999999999999863
No 7
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=100.00 E-value=2.2e-33 Score=248.72 Aligned_cols=148 Identities=48% Similarity=0.795 Sum_probs=143.0
Q ss_pred CcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCCC
Q 025136 109 EVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDS 188 (257)
Q Consensus 109 ~VKs~~EIe~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~~~Hg~p~~ 188 (257)
.|||++||++||+|+++++++++.+.+.++||+||.||++.++..+.++|+.+...++.+|+.++++|.|+..+|+.|++
T Consensus 2 ~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~~~H~~~~~ 81 (247)
T TIGR00500 2 SLKSPDEIEKIRKAGRLAAEVLEELEREVKPGVSTKELDRIAKDFIEKHGAKPAFLGYYGFPGSVCISVNEVVIHGIPDK 81 (247)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCCccccCCCCCCceeEeccccEEEecCCCC
Confidence 69999999999999999999999999999999999999999999999999988766777899899999999999999999
Q ss_pred CCCCCCCEEEEEecceeCcEEEeeeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHhHHHhhh
Q 025136 189 RALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTI 256 (257)
Q Consensus 189 r~L~~GDiV~iDvg~~~~GY~aD~tRT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~dI~~aI 256 (257)
++|++||+|++|+++.|+||++|++|||++|+++++++++|++++++++++++.+|||++++||++++
T Consensus 82 ~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~ 149 (247)
T TIGR00500 82 KVLKDGDIVNIDVGVIYDGYHGDTAKTFLVGKISPEAEKLLECTEESLYKAIEEAKPGNRIGEIGAAI 149 (247)
T ss_pred cccCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999876
No 8
>PRK12896 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=4.7e-33 Score=247.30 Aligned_cols=151 Identities=44% Similarity=0.791 Sum_probs=144.9
Q ss_pred CCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCC
Q 025136 106 SGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGI 185 (257)
Q Consensus 106 ~~R~VKs~~EIe~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~~~Hg~ 185 (257)
+.+.|||++||++||+|+++++++++.+.+.++||+||.||++.+.+.+.++|+.+++..+.+||.++|+|.|+..+|+.
T Consensus 6 ~~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~~~h~~ 85 (255)
T PRK12896 6 RGMEIKSPRELEKMRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLEEHGAIPSPEGYYGFPGSTCISVNEEVAHGI 85 (255)
T ss_pred CceeECCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHCCCEeCcccCCCCCcceEecCCCeeEecC
Confidence 45679999999999999999999999999999999999999999999999999998777777899999999999999999
Q ss_pred CCCCCCCCCCEEEEEecceeCcEEEeeeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHhHHHhhh
Q 025136 186 PDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTI 256 (257)
Q Consensus 186 p~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~dI~~aI 256 (257)
|++++|++||+|++|+++.++||++|++|||++|+++++++++|++++++++++++++|||++++||++++
T Consensus 86 p~~~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~ 156 (255)
T PRK12896 86 PGPRVIKDGDLVNIDVSAYLDGYHGDTGITFAVGPVSEEAEKLCRVAEEALWAGIKQVKAGRPLNDIGRAI 156 (255)
T ss_pred CCCccCCCCCEEEEEEeEEECcEEEeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999886
No 9
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=8.6e-33 Score=259.93 Aligned_cols=153 Identities=25% Similarity=0.348 Sum_probs=144.7
Q ss_pred CCCCCCcCCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCC
Q 025136 99 QKPIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVN 178 (257)
Q Consensus 99 ~~~~~~~~~R~VKs~~EIe~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n 178 (257)
+....+..+|+|||++||+.||+|+++++.++..+.+.++||+||.||.+.++..+.+.|+.. .+|+++|++|.|
T Consensus 143 ~~~~~i~~lR~iKs~~EI~~ir~A~~i~~~a~~~~~~~~~~g~tE~ev~a~l~~~~~~~G~~~-----~sf~~iv~~G~n 217 (384)
T COG0006 143 DASDLVDRLRLIKSPAEIAKIRKAAEIADAALEAALEAIRPGMTEAEIAAELEYALRKGGAEG-----PSFDTIVASGEN 217 (384)
T ss_pred ccHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCc-----cCcCcEEecccc
Confidence 334456789999999999999999999999999999999999999999999999999999764 248999999999
Q ss_pred CCcccCCCCCCCCCCCCEEEEEecceeCcEEEeeeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHhHHHhhh
Q 025136 179 ECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTI 256 (257)
Q Consensus 179 ~~~~Hg~p~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~dI~~aI 256 (257)
++.+|+.|+++.+++||+|+||+|+.|+|||+|+||||++|+++++++++|+.+++|++++++++|||++++||+.+.
T Consensus 218 ~a~pH~~~~~~~~~~gd~vliD~G~~~~gY~sDiTRT~~~G~~~~~~~~iy~~V~~aq~aa~~~~rpG~~~~~vd~~a 295 (384)
T COG0006 218 AALPHYTPSDRKLRDGDLVLIDLGGVYNGYCSDITRTFPIGKPSDEQREIYEAVLEAQEAAIAAIRPGVTGGEVDAAA 295 (384)
T ss_pred ccCcCCCCCcccccCCCEEEEEeeeEECCccccceeEEecCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999864
No 10
>PRK05716 methionine aminopeptidase; Validated
Probab=100.00 E-value=3.8e-32 Score=241.11 Aligned_cols=149 Identities=51% Similarity=0.873 Sum_probs=143.0
Q ss_pred CCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCC
Q 025136 108 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD 187 (257)
Q Consensus 108 R~VKs~~EIe~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~~~Hg~p~ 187 (257)
..|||++||+.||+|+++++++++.+.+.++||+||.||++.+...+.++|+.+.+.++.+|+.++++|.|+..+|+.|+
T Consensus 3 ~~iKs~~Ei~~~r~A~~i~~~~~~~a~~~i~pG~se~ela~~~~~~~~~~G~~~~~~~~~~~~~~~~~g~~~~~~h~~~~ 82 (252)
T PRK05716 3 ITIKTPEEIEKMRVAGRLAAEVLDEIEPHVKPGVTTKELDRIAEEYIRDQGAIPAPLGYHGFPKSICTSVNEVVCHGIPS 82 (252)
T ss_pred eeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHCCCEecccCCCCCCcCeEecccceeecCCCC
Confidence 47999999999999999999999999999999999999999999999999998776667788888999999999999999
Q ss_pred CCCCCCCCEEEEEecceeCcEEEeeeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHhHHHhhh
Q 025136 188 SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTI 256 (257)
Q Consensus 188 ~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~dI~~aI 256 (257)
+++|++||+|.+|+++.++||++|++|||++|+++++++++|++++++++++++++|||++++||++++
T Consensus 83 ~~~l~~Gd~v~id~g~~~~gY~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~dv~~~~ 151 (252)
T PRK05716 83 DKVLKEGDIVNIDVTVIKDGYHGDTSRTFGVGEISPEDKRLCEVTKEALYLGIAAVKPGARLGDIGHAI 151 (252)
T ss_pred CcccCCCCEEEEEEEEEECCEEEEeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999986
No 11
>PRK09795 aminopeptidase; Provisional
Probab=99.98 E-value=8.7e-32 Score=251.35 Aligned_cols=149 Identities=18% Similarity=0.318 Sum_probs=139.5
Q ss_pred CCcCCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcc
Q 025136 103 GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECIC 182 (257)
Q Consensus 103 ~~~~~R~VKs~~EIe~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~~~ 182 (257)
.+..+|+|||++||+.||+|+++++.+++.+.+.++||+||.||++.++..+.++|+.+. +|+++|++|.|+..|
T Consensus 120 ~~~~lR~iKs~~Ei~~~r~a~~i~~~~~~~~~~~i~~G~tE~e~~~~~~~~~~~~G~~~~-----~f~~iv~sG~~~~~p 194 (361)
T PRK09795 120 TPDVLRQIKTPEEVEKIRLACGIADRGAEHIRRFIQAGMSEREIAAELEWFMRQQGAEKA-----SFDTIVASGWRGALP 194 (361)
T ss_pred cHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHCCCCcC-----CCCeEEEEecccccc
Confidence 367899999999999999999999999999999999999999999999999999999763 588999999999999
Q ss_pred cCCCCCCCCCCCCEEEEEecceeCcEEEeeeeEEEcCC--CCHH---HHHHHHHHHHHHHHHHHHcCCCCCHhHHHhhh
Q 025136 183 HGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGD--VDDE---ARNLVKVTKDCLHKAISVCAPGMEYKKIGKTI 256 (257)
Q Consensus 183 Hg~p~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~vG~--~~~e---~~~l~~~~~ea~~~ai~~lkPG~~~~dI~~aI 256 (257)
|+.|++++|++||+|++|+|+.|+||++|++|||++|. ++++ ++++|++++++++++++++|||++++||++++
T Consensus 195 h~~~~~~~l~~gd~v~~d~g~~~~gY~sd~tRt~~~g~~~~~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~ 273 (361)
T PRK09795 195 HGKASDKIVAAGEFVTLDFGALYQGYCSDMTRTLLVNGEGVSAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAA 273 (361)
T ss_pred CCCCCCceecCCCEEEEEeccccCCEeecceEEEEeCCcCCchhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHH
Confidence 99999999999999999999999999999999999963 3433 78999999999999999999999999999875
No 12
>PRK10879 proline aminopeptidase P II; Provisional
Probab=99.98 E-value=7.5e-32 Score=258.13 Aligned_cols=148 Identities=21% Similarity=0.379 Sum_probs=140.8
Q ss_pred CcCCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCccc
Q 025136 104 IVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICH 183 (257)
Q Consensus 104 ~~~~R~VKs~~EIe~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~~~H 183 (257)
+.++|+|||++||+.||+|+++++.++..+++.++||+||.||++.+...+.++|+.. .+|+++|++|.|++++|
T Consensus 167 l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~~pG~tE~ei~a~~~~~~~~~G~~~-----~~~~~iv~~G~na~~~H 241 (438)
T PRK10879 167 VHEMRLFKSPEEIAVLRRAGEISALAHTRAMEKCRPGMFEYQLEGEIHHEFNRHGARY-----PSYNTIVGSGENGCILH 241 (438)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCCCC-----CCCCcEEEEcCcccccc
Confidence 4568999999999999999999999999999999999999999999999999999863 24888999999999999
Q ss_pred CCCCCCCCCCCCEEEEEecceeCcEEEeeeeEEEc-CCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHhHHHhhh
Q 025136 184 GIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFC-GDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTI 256 (257)
Q Consensus 184 g~p~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~v-G~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~dI~~aI 256 (257)
+.|+++.|++||+|++|+|+.++||++|+||||++ |+++++++++|++++++++++++++|||+++++|++++
T Consensus 242 ~~~~~~~l~~GDlVliD~G~~~~GY~sDitRT~~v~G~~s~~q~~~y~~vl~a~~aai~~~kpG~~~~~v~~~~ 315 (438)
T PRK10879 242 YTENESEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTPAQREIYDIVLESLETSLRLYRPGTSIREVTGEV 315 (438)
T ss_pred CCCCccccCCCCEEEEEeCeEECCEEEEeEEEEEECCcCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHH
Confidence 99999999999999999999999999999999999 89999999999999999999999999999999999865
No 13
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=99.97 E-value=1.7e-31 Score=252.18 Aligned_cols=156 Identities=15% Similarity=0.221 Sum_probs=137.4
Q ss_pred CCCCCCcCCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHC-CCCCCCCCCCCCCceeeecC
Q 025136 99 QKPIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDN-GAYPSPLGYGGFPKSVCTSV 177 (257)
Q Consensus 99 ~~~~~~~~~R~VKs~~EIe~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~-Ga~ps~l~y~gfp~~v~sg~ 177 (257)
+..+.+.++|+|||++||++||+|+++++.+++.+.+.++||+||.||++.+....... ....+ .+..|.+++.+|.
T Consensus 147 d~~~~~~~lR~iKs~~EI~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~~~~g~--~~~~~~~iv~sG~ 224 (391)
T TIGR02993 147 DATALVNWQRAVKSETEISYMRVAARIVEKMHQRIFERIEPGMRKCDLVADIYDAGIRGVDGFGG--DYPAIVPLLPSGA 224 (391)
T ss_pred ehHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhhcccCcCC--CcCCcccccccCc
Confidence 34445788999999999999999999999999999999999999999999886553321 11110 1224566788999
Q ss_pred CCCcccCCCCCCCCCCCCEEEEEecceeCcEEEeeeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHhHHHhhh
Q 025136 178 NECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTI 256 (257)
Q Consensus 178 n~~~~Hg~p~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~dI~~aI 256 (257)
|+..+|+.|++++|++||+|++|+++.|+||++|++|||++|+|+++++++|+++++|++++++++|||++++||++++
T Consensus 225 ~~a~pH~~~~~~~l~~gd~v~iD~g~~~~GY~sD~tRT~~vG~p~~~~~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~ 303 (391)
T TIGR02993 225 DASAPHLTWDDSPMKVGEGTFFEIAGCYKRYHCPLSRTVFLGKPTQAFLDAEKAVLEGMEAGLEAAKPGNTCEDIANAF 303 (391)
T ss_pred cccCCCCCCCCCcccCCCEEEEEeeeecccCccceeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999876
No 14
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=99.97 E-value=2.7e-30 Score=227.58 Aligned_cols=141 Identities=18% Similarity=0.233 Sum_probs=130.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCC-CCCCCCCceeeecCCCCcccCCCCCCCCCCC
Q 025136 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSP-LGYGGFPKSVCTSVNECICHGIPDSRALEDG 194 (257)
Q Consensus 116 Ie~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~-l~y~gfp~~v~sg~n~~~~Hg~p~~r~L~~G 194 (257)
|++||+|+++++++++++.+.++||+||.||++.+.+.+.+.|+...+ ..+.++.+++++|.|+..+|+.|++++|++|
T Consensus 1 I~~ir~Aa~i~d~~~~~~~~~i~pG~tE~ei~a~~~~~~~~~ga~~~~~~~~~~~~~~v~~G~~~~~~H~~~~~r~l~~G 80 (228)
T cd01090 1 IALIRHGARIADIGGAAVVEAIREGVPEYEVALAGTQAMVREIAKTFPEVELMDTWTWFQSGINTDGAHNPVTNRKVQRG 80 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccCCcccccCcceEEEeeccccccCCCCCCcccCCC
Confidence 689999999999999999999999999999999999999999875322 2233334678999999999999999999999
Q ss_pred CEEEEEecceeCcEEEeeeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHhHHHhhh
Q 025136 195 DTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTI 256 (257)
Q Consensus 195 DiV~iDvg~~~~GY~aD~tRT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~dI~~aI 256 (257)
|+|++|+++.++||++|++|||++|+++++++++|+++.+|++++++++|||++++||++++
T Consensus 81 D~v~~d~g~~~~GY~ad~~RT~~vG~~~~~~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~ 142 (228)
T cd01090 81 DILSLNCFPMIAGYYTALERTLFLDEVSDAHLKIWEANVAVHERGLELIKPGARCKDIAAEL 142 (228)
T ss_pred CEEEEEEeEEECCEeeeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999886
No 15
>PRK15173 peptidase; Provisional
Probab=99.97 E-value=2e-30 Score=239.35 Aligned_cols=153 Identities=19% Similarity=0.283 Sum_probs=137.6
Q ss_pred CCCCCCCcCCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecC
Q 025136 98 SQKPIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSV 177 (257)
Q Consensus 98 ~~~~~~~~~~R~VKs~~EIe~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~ 177 (257)
.+..+.+.++|+|||++||+.||+|+++++.++..+.+.++||+||.||++.++..+.+.|.... ..| .++.+|.
T Consensus 83 ~d~~~~i~~lR~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~~G~tE~el~a~~~~~~~~~g~~~~----~~~-~~i~~G~ 157 (323)
T PRK15173 83 VDSSSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMSKSETHF----SRF-HLISVGA 157 (323)
T ss_pred EEhHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCC----CCC-cEEEECC
Confidence 34445678999999999999999999999999999999999999999999999888888765431 123 4667777
Q ss_pred CCCcccCCCCCCCCCCCCEEEEEecceeCcEEEeeeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHhHHHhhh
Q 025136 178 NECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTI 256 (257)
Q Consensus 178 n~~~~Hg~p~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~dI~~aI 256 (257)
+ ..+|+.|+++.+++||+|++|+++.|+||++|++|||++|+++++++++|++++++++++++++|||++++||++++
T Consensus 158 ~-~~~h~~~~~~~l~~Gd~V~iD~g~~~~GY~aDitRT~~vG~p~~~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~ 235 (323)
T PRK15173 158 D-FSPKLIPSNTKACSGDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDST 235 (323)
T ss_pred C-CccCCCCCCCccCCCCEEEEEeCccCCCEeeeeEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHH
Confidence 6 56899999999999999999999999999999999999999999999999999999999999999999999999875
No 16
>PRK14575 putative peptidase; Provisional
Probab=99.97 E-value=2.9e-30 Score=244.97 Aligned_cols=158 Identities=18% Similarity=0.246 Sum_probs=141.0
Q ss_pred CCCccCCCCCCCcCCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCce
Q 025136 93 PPYVNSQKPIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKS 172 (257)
Q Consensus 93 P~y~~~~~~~~~~~~R~VKs~~EIe~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~ 172 (257)
|.....+..+.+.++|+|||++||+.||+|+++++++++.+.+.++||+||.||++.++..+.+.|.... . +.++
T Consensus 161 p~~~~~d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~i~pG~tE~elaa~~~~~~~~~g~~~~----~-~~~~ 235 (406)
T PRK14575 161 PNVDFVDSSSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMSKSETHF----S-RFHL 235 (406)
T ss_pred CCCeEEEcHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCcC----C-cCce
Confidence 3333444555678899999999999999999999999999999999999999999999998888776541 1 2246
Q ss_pred eeecCCCCcccCCCCCCCCCCCCEEEEEecceeCcEEEeeeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHhHH
Q 025136 173 VCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKI 252 (257)
Q Consensus 173 v~sg~n~~~~Hg~p~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~dI 252 (257)
+.+|.+ ..+|+.|+++++++||+|++|+|+.++||++|++|||++|+++++++++|++++++++++++++|||++++||
T Consensus 236 v~~G~~-~~~h~~~~~~~l~~Gd~v~iD~g~~~~GY~sditRT~~vG~~~~~~~~~~~~~~~a~~~~~~~~rpG~~~~dv 314 (406)
T PRK14575 236 ISVGAD-FSPKLIPSNTKACSGDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQTIRTGHEHMLSMVAPGVKMKDV 314 (406)
T ss_pred EEECCC-cccCCCCCCCcCCCCCEEEEEeceEECCEeeeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHH
Confidence 777877 5689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhh
Q 025136 253 GKTI 256 (257)
Q Consensus 253 ~~aI 256 (257)
++++
T Consensus 315 ~~a~ 318 (406)
T PRK14575 315 FDST 318 (406)
T ss_pred HHHH
Confidence 9875
No 17
>PRK14576 putative endopeptidase; Provisional
Probab=99.97 E-value=5.4e-30 Score=243.07 Aligned_cols=153 Identities=19% Similarity=0.266 Sum_probs=139.4
Q ss_pred CCCCCCCcCCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecC
Q 025136 98 SQKPIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSV 177 (257)
Q Consensus 98 ~~~~~~~~~~R~VKs~~EIe~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~ 177 (257)
.+..+.+.++|+|||++||+.||+|+++++.++..+.+.++||+||.||++.++..+.+.|... +..| ++|++|.
T Consensus 165 vd~~~~l~~lR~iKs~~EI~~~r~A~~i~~~~~~~~~~~i~pG~tE~elaa~~~~~~~~~g~~~----~~~~-~~v~~G~ 239 (405)
T PRK14576 165 VDSTALFNEIRMIKSPWEIEHLRKSAEITEYGIASAAKKIRVGCTAAELTAAFKAAVMSFPETN----FSRF-NLISVGD 239 (405)
T ss_pred EEcHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCc----CCCC-CEEEECC
Confidence 3444457889999999999999999999999999999999999999999999999999887542 1123 5788898
Q ss_pred CCCcccCCCCCCCCCCCCEEEEEecceeCcEEEeeeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHhHHHhhh
Q 025136 178 NECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTI 256 (257)
Q Consensus 178 n~~~~Hg~p~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~dI~~aI 256 (257)
| ..+|+.|+++.+++||+|++|+++.++||++|++|||++|+++++++++|+++.++++++++++|||++++||++++
T Consensus 240 ~-~~~h~~~~~~~l~~Gd~v~~d~g~~~~GY~sd~tRT~~~G~p~~~~~~~~~~~~~a~~a~~~~~rPG~~~~dv~~a~ 317 (405)
T PRK14576 240 N-FSPKIIADTTPAKVGDLIKFDCGIDVAGYGADLARTFVLGEPDKLTQQIYDTIRTGHEHMLSMVAPGVKLKAVFDST 317 (405)
T ss_pred c-ccCCCCCCCcccCCCCEEEEEeceeECCEEeeeeEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHH
Confidence 8 56899999999999999999999999999999999999999999999999999999999999999999999999875
No 18
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=99.97 E-value=1.8e-29 Score=222.19 Aligned_cols=141 Identities=55% Similarity=0.984 Sum_probs=136.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCCCCCCCCCC
Q 025136 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 195 (257)
Q Consensus 116 Ie~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~~~Hg~p~~r~L~~GD 195 (257)
|+.||+|+++++++++++.+.++||+||.||++.+.+.+.++|+.+.++++.+|+..+++|.|+..+|+.|++++|++||
T Consensus 1 I~~lr~A~~i~~~~~~~~~~~~~pG~tE~ev~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~l~~Gd 80 (238)
T cd01086 1 IEGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICTSVNEVVCHGIPDDRVLKDGD 80 (238)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCcccccCCCCCcceecCCCCceeCCCCCCcccCCCC
Confidence 68999999999999999999999999999999999999999999987777888988899999999999999999999999
Q ss_pred EEEEEecceeCcEEEeeeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHhHHHhhh
Q 025136 196 TINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTI 256 (257)
Q Consensus 196 iV~iDvg~~~~GY~aD~tRT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~dI~~aI 256 (257)
+|.+|+++.++||++|++|||++|+++++++++|+++.++++++++++|||++++||++++
T Consensus 81 ~v~id~g~~~~GY~ad~~RT~~~G~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~ 141 (238)
T cd01086 81 IVNIDVGVELDGYHGDSARTFIVGEVSEEAKKLVEVTEEALYKGIEAVKPGNRIGDIGHAI 141 (238)
T ss_pred EEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999886
No 19
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=99.97 E-value=1.6e-29 Score=223.48 Aligned_cols=135 Identities=28% Similarity=0.438 Sum_probs=129.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCCCCCCCCCC
Q 025136 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 195 (257)
Q Consensus 116 Ie~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~~~Hg~p~~r~L~~GD 195 (257)
|++||+|+++++++++++.+.++||+||.||++.++..+.++|+.+ .|+.++++|.|+..+|+.|++++|++||
T Consensus 1 i~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~G~~~------~~~~~v~~g~~~~~~H~~~~~~~l~~Gd 74 (243)
T cd01087 1 IELMRKACDISAEAHRAAMKASRPGMSEYELEAEFEYEFRSRGARL------AYSYIVAAGSNAAILHYVHNDQPLKDGD 74 (243)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCCc------CCCCeEEECCCccccCCCcCCCcCCCCC
Confidence 6899999999999999999999999999999999999999999883 3788999999999999999999999999
Q ss_pred EEEEEecceeCcEEEeeeeEEEc-CCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHhHHHhhh
Q 025136 196 TINIDVTVYLNGYHGDTSATFFC-GDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTI 256 (257)
Q Consensus 196 iV~iDvg~~~~GY~aD~tRT~~v-G~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~dI~~aI 256 (257)
+|++|+++.|+||++|++|||++ |+++++++++|++++++++++++++|||++++||++++
T Consensus 75 ~v~vD~g~~~~GY~ad~~Rt~~vgg~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~ 136 (243)
T cd01087 75 LVLIDAGAEYGGYASDITRTFPVNGKFTDEQRELYEAVLAAQKAAIAACKPGVSYEDIHLLA 136 (243)
T ss_pred EEEEEeCceECCEeeeeeEEEEeCCcCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHH
Confidence 99999999999999999999999 69999999999999999999999999999999999875
No 20
>PRK13607 proline dipeptidase; Provisional
Probab=99.96 E-value=1.5e-29 Score=242.50 Aligned_cols=148 Identities=17% Similarity=0.201 Sum_probs=132.2
Q ss_pred CCCcCCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCc
Q 025136 102 IGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECI 181 (257)
Q Consensus 102 ~~~~~~R~VKs~~EIe~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~~ 181 (257)
+.+.++|+|||++||+.||+|+++++++++.+.+.++||+||.||++.+.... ..++.. .+|+++|++|.|+++
T Consensus 153 ~~l~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~tE~ei~~~~~~~~-~~~~~~-----~~y~~iva~G~naa~ 226 (443)
T PRK13607 153 DYLHYHRAYKTDYELACMREAQKIAVAGHRAAKEAFRAGMSEFDINLAYLTAT-GQRDND-----VPYGNIVALNEHAAV 226 (443)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHh-CCCCcC-----CCCCcEEEecCcceE
Confidence 34678899999999999999999999999999999999999999998654332 222221 358899999999999
Q ss_pred ccCCCCCC-CCCCCCEEEEEecceeCcEEEeeeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHhHHHhhh
Q 025136 182 CHGIPDSR-ALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTI 256 (257)
Q Consensus 182 ~Hg~p~~r-~L~~GDiV~iDvg~~~~GY~aD~tRT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~dI~~aI 256 (257)
+|+.|+++ .+++||+|++|+|+.++||++|+||||+ |+++++++++|+++++|++++++++|||++++||+++.
T Consensus 227 ~H~~~~~~~~~~~Gd~vliD~Ga~~~GY~sDiTRTf~-g~~~~~~~~ly~~v~~aq~aai~~ikPG~~~~dv~~aa 301 (443)
T PRK13607 227 LHYTKLDHQAPAEMRSFLIDAGAEYNGYAADITRTYA-AKEDNDFAALIKDVNKEQLALIATMKPGVSYVDLHIQM 301 (443)
T ss_pred ecCCccCCCCCCCCCEEEEEeeEEECCEEecceEEEe-cCCCHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHH
Confidence 99999875 6899999999999999999999999999 88999999999999999999999999999999999764
No 21
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=99.96 E-value=2.1e-28 Score=210.01 Aligned_cols=136 Identities=28% Similarity=0.501 Sum_probs=130.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCCCCCCCCCC
Q 025136 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 195 (257)
Q Consensus 116 Ie~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~~~Hg~p~~r~L~~GD 195 (257)
|++||+|+++++.++.++.+.++||+||.||++.++..+.++|+++. +|+++|++|.|+..+|+.|++++|++||
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~~~~-----~~~~~v~~g~~~~~~h~~~~~~~l~~gd 75 (208)
T cd01092 1 IELLRKAARIADKAFEELLEFIKPGMTEREVAAELEYFMRKLGAEGP-----SFDTIVASGPNSALPHGVPSDRKIEEGD 75 (208)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCCC-----CCCcEEEECccccccCCCCCCcCcCCCC
Confidence 68999999999999999999999999999999999999999998752 5889999999999999999999999999
Q ss_pred EEEEEecceeCcEEEeeeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHhHHHhhh
Q 025136 196 TINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTI 256 (257)
Q Consensus 196 iV~iDvg~~~~GY~aD~tRT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~dI~~aI 256 (257)
+|++|+++.++||++|++|||++|+++++++++++++.++++.+++.+|||++++||++++
T Consensus 76 ~v~id~g~~~~gy~~d~~RT~~~g~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~ 136 (208)
T cd01092 76 LVLIDFGAIYDGYCSDITRTVAVGEPSDELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAA 136 (208)
T ss_pred EEEEEeeeeECCEeccceeEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999876
No 22
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=99.96 E-value=2.4e-28 Score=230.56 Aligned_cols=149 Identities=21% Similarity=0.361 Sum_probs=132.5
Q ss_pred CCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCC----CCCCCceeeecCCCCccc
Q 025136 108 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLG----YGGFPKSVCTSVNECICH 183 (257)
Q Consensus 108 R~VKs~~EIe~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~----y~gfp~~v~sg~n~~~~H 183 (257)
-.+|+++||+.||+|++|++.+++.+.+.++||+|+.||+..+++++.+.++. .+.+ +.+|+..+|++.|+++||
T Consensus 11 ~~i~~~~eI~~~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~~~a~-~~~~~~~~~~g~afpt~vSvN~~v~H 89 (389)
T TIGR00495 11 YSLSNPEVVTKYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEETAK-IFKKEKEMEKGIAFPTCISVNNCVGH 89 (389)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhhhh-hhcccccccCCCCCCeEEecCCeeeC
Confidence 46999999999999999999999999999999999999999999999987653 2211 334444467789999999
Q ss_pred CCC--C--CCCCCCCCEEEEEecceeCcEEEeeeeEEEcCC-----CCHHHHHHHHHHHHHHHHHHHHcCCCCCHhHHHh
Q 025136 184 GIP--D--SRALEDGDTINIDVTVYLNGYHGDTSATFFCGD-----VDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGK 254 (257)
Q Consensus 184 g~p--~--~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~vG~-----~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~dI~~ 254 (257)
++| + ++.|++||+|+||+|+.++||++|++|||++|+ ++++++++++++++|++++++.+|||++++||++
T Consensus 90 ~~P~~~d~~~~Lk~GDvVkIDlG~~idGY~aD~arTv~vG~~~~~~~t~~~~~l~~aa~~A~~aai~~vkPG~~~~dI~~ 169 (389)
T TIGR00495 90 FSPLKSDQDYILKEGDVVKIDLGCHIDGFIALVAHTFVVGVAQEEPVTGRKADVIAAAHLAAEAALRLVKPGNTNTQVTE 169 (389)
T ss_pred CCCCCCCCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEECCcccccCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHH
Confidence 999 2 488999999999999999999999999999995 5678999999999999999999999999999999
Q ss_pred hhC
Q 025136 255 TIQ 257 (257)
Q Consensus 255 aI~ 257 (257)
+|+
T Consensus 170 ai~ 172 (389)
T TIGR00495 170 AIN 172 (389)
T ss_pred HHH
Confidence 884
No 23
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=99.95 E-value=3.3e-27 Score=203.13 Aligned_cols=134 Identities=31% Similarity=0.511 Sum_probs=125.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHH-HHHCCCCCCCCCCCCCCceeeecCCCCcccCCCCCCCCCCCC
Q 025136 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQM-IIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 195 (257)
Q Consensus 117 e~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~-i~~~Ga~ps~l~y~gfp~~v~sg~n~~~~Hg~p~~r~L~~GD 195 (257)
|+||+|+++++++++.+.+.++||+||.||.+.+.+. +.++|... .+|+.++++|.|...+|+.|++++|++||
T Consensus 1 e~~R~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~~g~~~-----~~~~~~~~~g~~~~~~~~~~~~~~l~~gd 75 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEALRPGMTEYEIAAAIERAMLRRHGGEE-----PAFPPIVGSGPNTDLPHYTPTDRRLQEGD 75 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCBHHHHHHHHHHHHHHHTTTTE-----ESSESEEEECCCCGETTTBCCSSBESTTE
T ss_pred CHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHcCCCc-----ccCCceEecCCcceecceeccceeeecCC
Confidence 6899999999999999999999999999999999998 56777543 25788999999999999999999999999
Q ss_pred EEEEEecceeCcEEEeeeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHhHHHhhh
Q 025136 196 TINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTI 256 (257)
Q Consensus 196 iV~iDvg~~~~GY~aD~tRT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~dI~~aI 256 (257)
+|++|+++.++||++|++|||++| ++++++++++.++++++.+++.+|||++++||++++
T Consensus 76 ~v~id~~~~~~gy~~d~~Rt~~~G-~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~ 135 (207)
T PF00557_consen 76 IVIIDFGPRYDGYHADIARTFVVG-PTPEQRRAYEAAREALEAAIEALRPGVTGSDVYEAV 135 (207)
T ss_dssp EEEEEEEEEETTEEEEEEEEEESS-SHHHHHHHHHHHHHHHHHHHHH-STTSBHHHHHHHH
T ss_pred cceeeccceeeeeEeeeeeEEEEe-ecccccchhhhhHHHHHhHhhhcccccccchhhHHH
Confidence 999999999999999999999999 999999999999999999999999999999999886
No 24
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=99.95 E-value=4.8e-27 Score=206.55 Aligned_cols=139 Identities=24% Similarity=0.467 Sum_probs=120.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCC--CCC-CCCCC--CCCceeeecCCCCcccCCC----
Q 025136 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGA--YPS-PLGYG--GFPKSVCTSVNECICHGIP---- 186 (257)
Q Consensus 116 Ie~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga--~ps-~l~y~--gfp~~v~sg~n~~~~Hg~p---- 186 (257)
+++||+|++|++++++.+.+.++||+||.||+..++.++.+... ++. ..++. .|+++ ++.|+..+|+.|
T Consensus 1 ~~~~r~A~~I~~~~~~~~~~~i~pG~te~ei~~~~e~~i~~~~~~~~~~~~~g~~g~~~~~~--v~~n~~~~H~~p~~~~ 78 (228)
T cd01089 1 VTKYKTAGQIANKVLKQVISLCVPGAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPTC--ISVNNCVCHFSPLKSD 78 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccccCcccccCCCCcCeE--eccCceeecCCCCCCC
Confidence 36899999999999999999999999999999888888777432 221 12222 35544 457999999996
Q ss_pred CCCCCCCCCEEEEEecceeCcEEEeeeeEEEcCCCCH-----HHHHHHHHHHHHHHHHHHHcCCCCCHhHHHhhh
Q 025136 187 DSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDD-----EARNLVKVTKDCLHKAISVCAPGMEYKKIGKTI 256 (257)
Q Consensus 187 ~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~vG~~~~-----e~~~l~~~~~ea~~~ai~~lkPG~~~~dI~~aI 256 (257)
++++|++||+|++|+|+.|+||++|++|||++|++++ ++++++++++++++++++++|||++++||++++
T Consensus 79 ~~~~l~~Gd~v~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~~~~~~~~~~~~ea~~~~~~~~kpG~~~~dv~~a~ 153 (228)
T cd01089 79 ATYTLKDGDVVKIDLGCHIDGYIAVVAHTIVVGAEAETPVTGKKADVIAAAHYALEAALRLLRPGNQNSDITEAI 153 (228)
T ss_pred CCcccCCCCEEEEEEEEEECCEEEEEEEEEEeCCcCccccchHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHH
Confidence 6789999999999999999999999999999999875 899999999999999999999999999999986
No 25
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=99.95 E-value=1e-26 Score=222.50 Aligned_cols=143 Identities=24% Similarity=0.321 Sum_probs=128.2
Q ss_pred CCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHC----CCCCCCCCCCCCCceeeecCCCCc
Q 025136 106 SGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDN----GAYPSPLGYGGFPKSVCTSVNECI 181 (257)
Q Consensus 106 ~~R~VKs~~EIe~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~----Ga~ps~l~y~gfp~~v~sg~n~~~ 181 (257)
+.+..+|++||+.||+|++|++++++.+.+.++||||+.||+..++..+.+. |+... .+||+ |+|.|++.
T Consensus 148 ~~~~~~s~~EI~~~R~AaeIa~~vl~~~~~~IkpG~se~EIa~~ie~~ir~~~~~~G~~~g----~aFPt--~vS~N~~a 221 (470)
T PTZ00053 148 RELEKLSEEQYQDLRRAAEVHRQVRRYAQSVIKPGVKLIDICERIESKSRELIEADGLKCG----WAFPT--GCSLNHCA 221 (470)
T ss_pred CccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHhcCCccc----CCCCc--eeecCccc
Confidence 3445689999999999999999999999999999999999999888866543 55322 46887 45799999
Q ss_pred ccCCCC---CCCCCCCCEEEEEecceeCcEEEeeeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHhHHHhhhC
Q 025136 182 CHGIPD---SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQ 257 (257)
Q Consensus 182 ~Hg~p~---~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~dI~~aI~ 257 (257)
+|++|+ +++|++||+|.||+|+.++||++|++|||++| ++++++++++++|++++|++++||++++||+++|+
T Consensus 222 aH~tP~~gd~~vLk~GDvVkID~G~~vdGYiaD~ArTv~vg---~~~~~L~eAv~eA~~aaI~~~kpGv~~~dI~~AIq 297 (470)
T PTZ00053 222 AHYTPNTGDKTVLTYDDVCKLDFGTHVNGRIIDCAFTVAFN---PKYDPLLQATKDATNTGIKEAGIDVRLSDIGAAIQ 297 (470)
T ss_pred cCCCCCCCCCcEecCCCeEEEEEeEEECCEEEeEEEEEEeC---HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 999996 68899999999999999999999999999997 68899999999999999999999999999999984
No 26
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=99.94 E-value=2.6e-26 Score=194.47 Aligned_cols=135 Identities=27% Similarity=0.523 Sum_probs=128.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCCCCCCCCCC
Q 025136 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 195 (257)
Q Consensus 116 Ie~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~~~Hg~p~~r~L~~GD 195 (257)
|+.||+|+++++.+++.+.+.++||+||.||.+.+.+.+.++|+++ .|+.++.+|.|...+|+.|+++++++||
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~~~------~~~~~v~~g~~~~~~h~~~~~~~i~~gd 74 (207)
T cd01066 1 IARLRKAAEIAEAAMAAAAEAIRPGVTEAEVAAAIEQALRAAGGYP------AGPTIVGSGARTALPHYRPDDRRLQEGD 74 (207)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCC------CCCcEEEECccccCcCCCCCCCCcCCCC
Confidence 5789999999999999999999999999999999999999999943 3678888899889999999999999999
Q ss_pred EEEEEecceeCcEEEeeeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHhHHHhhh
Q 025136 196 TINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTI 256 (257)
Q Consensus 196 iV~iDvg~~~~GY~aD~tRT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~dI~~aI 256 (257)
+|++|+++.++||++|++|||++|+++++++++++.+.++++.+++.+|||+++.||++++
T Consensus 75 ~v~~d~g~~~~gy~~d~~rt~~~g~~~~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~ 135 (207)
T cd01066 75 LVLVDLGGVYDGYHADLTRTFVIGEPSDEQRELYEAVREAQEAALAALRPGVTAEEVDAAA 135 (207)
T ss_pred EEEEEeceeECCCccceeceeEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999886
No 27
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=99.94 E-value=3.1e-26 Score=209.16 Aligned_cols=134 Identities=34% Similarity=0.524 Sum_probs=124.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCC---CC
Q 025136 113 EKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD---SR 189 (257)
Q Consensus 113 ~~EIe~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~~~Hg~p~---~r 189 (257)
-+||++||+|+++++++++.+.+.++||+|+.||++.++..+.+.|+.++ ||+++ +.|++.+|+.|. ++
T Consensus 2 ~~~i~~~r~A~~I~~~~~~~~~~~i~~G~se~el~~~~e~~~~~~g~~~a------Fp~~v--s~n~~~~H~~p~~~d~~ 73 (295)
T TIGR00501 2 IERAEKWIEAGKIHSKVRREAADRIVPGVKLLEVAEFVENRIRELGAEPA------FPCNI--SINECAAHFTPKAGDKT 73 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCCC------CCcce--ecCCEeeCCCCCCCcCc
Confidence 47999999999999999999999999999999999999999999999864 88765 478999999985 67
Q ss_pred CCCCCCEEEEEecceeCcEEEeeeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHhHHHhhhC
Q 025136 190 ALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQ 257 (257)
Q Consensus 190 ~L~~GDiV~iDvg~~~~GY~aD~tRT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~dI~~aI~ 257 (257)
.|++||+|++|+|+.++||++|++|||++|+ ..+++++++++|++++++.+|||++++||+++++
T Consensus 74 ~l~~GDvV~iD~G~~~dGY~aD~arT~~vG~---~~~~l~~a~~~A~~aai~~~kPGv~~~dV~~ai~ 138 (295)
T TIGR00501 74 VFKDGDVVKLDLGAHVDGYIADTAITVDLGD---QYDNLVKAAKDALYTAIKEIRAGVRVGEIGKAIQ 138 (295)
T ss_pred cCCCCCEEEEEEeEEECCEEEEEEEEEEeCc---HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 8999999999999999999999999999985 3689999999999999999999999999999874
No 28
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=99.94 E-value=8.6e-26 Score=198.70 Aligned_cols=134 Identities=16% Similarity=0.101 Sum_probs=121.0
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCC--CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCC---CCCCC
Q 025136 118 CMRVSGRLAAQVLEYAGTLVKPG--ITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD---SRALE 192 (257)
Q Consensus 118 ~mR~A~~ia~~al~~~~~~ikpG--vTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~~~Hg~p~---~r~L~ 192 (257)
.||.+..+ .++++.+.+.++|| +||.||++.+++++...|.++. .+|+++||+|+|++++|+.|+ +++|+
T Consensus 6 ~~~~~~~~-~~~~~~~~~~i~~G~~~tE~eiaa~~~~~~~~~g~~~~----~~f~~~v~~g~n~~~~H~~p~~~~~r~l~ 80 (224)
T cd01085 6 HIRDGVAL-VEFLAWLEQEVPKGETITELSAADKLEEFRRQQKGYVG----LSFDTISGFGPNGAIVHYSPTEESNRKIS 80 (224)
T ss_pred HHHHHHHH-HHHHHHHHHHhccCCCEeHHHHHHHHHHHHHHcCCCcC----CCcceEEEecCccCcCCCCcCcccCcccC
Confidence 45555555 59999999999999 9999999999988877765432 258999999999999999998 99999
Q ss_pred CCCEEEEEecceeCcEEEeeeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHc-CCCCCHhHHHhhh
Q 025136 193 DGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVC-APGMEYKKIGKTI 256 (257)
Q Consensus 193 ~GDiV~iDvg~~~~GY~aD~tRT~~vG~~~~e~~~l~~~~~ea~~~ai~~l-kPG~~~~dI~~aI 256 (257)
+||+|++|+++.++||++|++|||++|+++++++++|+.+++++.++++.+ +||+++++|++++
T Consensus 81 ~GD~V~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~ 145 (224)
T cd01085 81 PDGLYLIDSGGQYLDGTTDITRTVHLGEPTAEQKRDYTLVLKGHIALARAKFPKGTTGSQLDALA 145 (224)
T ss_pred CCCEEEEEeCccCCCcccccEEeecCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999988 5999999999875
No 29
>PRK08671 methionine aminopeptidase; Provisional
Probab=99.93 E-value=2e-25 Score=203.44 Aligned_cols=132 Identities=33% Similarity=0.568 Sum_probs=122.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCC---CCCC
Q 025136 115 GIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD---SRAL 191 (257)
Q Consensus 115 EIe~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~~~Hg~p~---~r~L 191 (257)
+|++||+|++|++++++.+.+.++||+||.||++.++..+.+.|+.++ ||+.+ +.|+..+|+.|. +++|
T Consensus 1 ~i~~~r~A~~I~~~~~~~~~~~i~pG~se~ei~~~~~~~i~~~g~~~a------fp~~v--s~n~~~~H~~p~~~d~~~l 72 (291)
T PRK08671 1 ELEKYLEAGKIASKVREEAAKLIKPGAKLLDVAEFVENRIRELGAKPA------FPCNI--SINEVAAHYTPSPGDERVF 72 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCccC------CCCEE--eeCCCccCCCCCCCCCccc
Confidence 589999999999999999999999999999999999999999998764 77655 467788999986 6889
Q ss_pred CCCCEEEEEecceeCcEEEeeeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHhHHHhhhC
Q 025136 192 EDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQ 257 (257)
Q Consensus 192 ~~GDiV~iDvg~~~~GY~aD~tRT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~dI~~aI~ 257 (257)
++||+|++|+|+.++||++|++||+++| ++++++++++.+|++++++.+|||++++||+++++
T Consensus 73 ~~GDvV~iD~G~~~dGY~aD~arT~~vG---~~~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~ 135 (291)
T PRK08671 73 PEGDVVKLDLGAHVDGYIADTAVTVDLG---GKYEDLVEASEEALEAAIEVVRPGVSVGEIGRVIE 135 (291)
T ss_pred CCCCEEEEEEeEEECCEEEEEEEEEEeC---hhHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 9999999999999999999999999998 47889999999999999999999999999999874
No 30
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=99.93 E-value=5.9e-25 Score=200.31 Aligned_cols=131 Identities=34% Similarity=0.573 Sum_probs=121.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCCC---CCCC
Q 025136 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDS---RALE 192 (257)
Q Consensus 116 Ie~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~~~Hg~p~~---r~L~ 192 (257)
+++||+|+++++.+++++.+.++||+||.||++.+++.+.++|+.++ ||. ++|.|+..+|+.|+. +.|+
T Consensus 1 ~~~~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~~G~~~a------fp~--~is~n~~~~H~~p~~~d~~~l~ 72 (291)
T cd01088 1 LEKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRELGAGPA------FPV--NLSINECAAHYTPNAGDDTVLK 72 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCC------CCc--eeccCCEeeCCCCCCCCCcccC
Confidence 36899999999999999999999999999999999999999998764 774 468999999999864 8999
Q ss_pred CCCEEEEEecceeCcEEEeeeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHhHHHhhhC
Q 025136 193 DGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQ 257 (257)
Q Consensus 193 ~GDiV~iDvg~~~~GY~aD~tRT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~dI~~aI~ 257 (257)
+||+|.+|+|+.++||++|++|||++|+ +++++++++++|++++++.+|||++++||+++++
T Consensus 73 ~GDvV~iD~G~~~dGY~sD~arT~~vg~---~~~~l~ea~~~A~~~ai~~ikPG~~~~dV~~ai~ 134 (291)
T cd01088 73 EGDVVKLDFGAHVDGYIADSAFTVDFDP---KYDDLLEAAKEALNAAIKEAGPDVRLGEIGEAIE 134 (291)
T ss_pred CCCEEEEEEEEEECCEEEEEEEEEecCh---hHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 9999999999999999999999999985 7889999999999999999999999999999874
No 31
>KOG2737 consensus Putative metallopeptidase [General function prediction only]
Probab=99.92 E-value=6.3e-25 Score=201.73 Aligned_cols=149 Identities=15% Similarity=0.262 Sum_probs=140.2
Q ss_pred CCCcCCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCc
Q 025136 102 IGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECI 181 (257)
Q Consensus 102 ~~~~~~R~VKs~~EIe~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~~ 181 (257)
|++.+.|.|||+.||+.||.|++|+++++.++++.++||+.|.++...+......+|.-.. .+|..++|+|.|+.+
T Consensus 177 p~m~E~RviKs~~EieviRya~kISseaH~~vM~~~~pg~~Eyq~eslF~hh~y~~GGcRh----~sYtcIc~sG~ns~v 252 (492)
T KOG2737|consen 177 PILAECRVIKSSLEIEVIRYANKISSEAHIEVMRAVRPGMKEYQLESLFLHHSYSYGGCRH----LSYTCICASGDNSAV 252 (492)
T ss_pred HHHhhheeeCCHHHHHHHHHHHhhccHHHHHHHHhCCchHhHHhHHHHHHHhhhccCCccc----cccceeeecCCCcce
Confidence 5678999999999999999999999999999999999999999999999888888877332 368889999999999
Q ss_pred ccC----CCCCCCCCCCCEEEEEecceeCcEEEeeeeEEEc-CCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHhHHHh
Q 025136 182 CHG----IPDSRALEDGDTINIDVTVYLNGYHGDTSATFFC-GDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGK 254 (257)
Q Consensus 182 ~Hg----~p~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~v-G~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~dI~~ 254 (257)
.|+ .|+++.+++||.+++|+|+.|.+|.+|+|++|.. |+.+++|+.+|++++.+..++++++|||+.+.|++.
T Consensus 253 LHYgha~apNd~~iqdgd~cLfDmGaey~~yaSDITcsFP~nGKFTadqk~VYnaVLda~navm~a~KpGv~W~Dmh~ 330 (492)
T KOG2737|consen 253 LHYGHAGAPNDRTIQDGDLCLFDMGAEYHFYASDITCSFPVNGKFTADQKLVYNAVLDASNAVMEAMKPGVWWVDMHK 330 (492)
T ss_pred eeccccCCCCCcccCCCCEEEEecCcceeeeecccceeccCCCccchhHHHHHHHHHHHHHHHHHhcCCCCccccHHH
Confidence 998 7999999999999999999999999999999999 999999999999999999999999999999999875
No 32
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=99.91 E-value=1.9e-23 Score=185.94 Aligned_cols=139 Identities=14% Similarity=0.199 Sum_probs=125.6
Q ss_pred HHHHHHHHHHHHHHHHHHhh-----hcCCC--CCHHHHHHHHHHHHHHCCCC-----CCCCCCCCCCceeeecCCC-Ccc
Q 025136 116 IECMRVSGRLAAQVLEYAGT-----LVKPG--ITTDEIDKAVHQMIIDNGAY-----PSPLGYGGFPKSVCTSVNE-CIC 182 (257)
Q Consensus 116 Ie~mR~A~~ia~~al~~~~~-----~ikpG--vTe~EI~~~v~~~i~~~Ga~-----ps~l~y~gfp~~v~sg~n~-~~~ 182 (257)
++.||+|++++..+|..... .|.+| +|+.+|+..++..+.+.+.. +..+. ..|+++|++|.|. ..+
T Consensus 1 ~~~~~~a~~~~~~~~~~~~~~~~~~~id~~~~~t~~~l~~~~e~~~~~~~~~~~~~~~~~~~-~~y~~iv~sG~~~~~l~ 79 (243)
T cd01091 1 LNNIKKASDATVDVLKKFFVDEVEEIIDQEKKVTHSKLSDKVEKAIEDKKKYKAKLDPEQLD-WCYPPIIQSGGNYDLLK 79 (243)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHhCchhhhcCCCHHHcC-cccCCeEeECcCcccCC
Confidence 46899999999999976555 89999 99999999999999988754 22222 3589999999999 899
Q ss_pred cCCCCCCCCCCCCEEEEEecceeCcEEEeeeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHhHHHhhh
Q 025136 183 HGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTI 256 (257)
Q Consensus 183 Hg~p~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~dI~~aI 256 (257)
|+.++++.++.|++|++|+|+.|+|||+|++|||++| ++++++++|++++++++++++++|||++++||++++
T Consensus 80 h~~~s~~~~~~~~~vl~d~G~~y~gY~sditRT~~v~-p~~~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a 152 (243)
T cd01091 80 SSSSSDKLLYHFGVIICSLGARYKSYCSNIARTFLID-PTSEQQKNYNFLLALQEEILKELKPGAKLSDVYQKT 152 (243)
T ss_pred CCCCCccccCCCCEEEEEeCcccCCEeecceEEEEcC-CCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHH
Confidence 9999999999999999999999999999999999997 799999999999999999999999999999999875
No 33
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=99.90 E-value=1.8e-23 Score=193.73 Aligned_cols=148 Identities=19% Similarity=0.238 Sum_probs=141.0
Q ss_pred CCcCCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcc
Q 025136 103 GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECIC 182 (257)
Q Consensus 103 ~~~~~R~VKs~~EIe~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~~~ 182 (257)
.+.++|.||||.|+++||+||.|+.+++-..+-.-+++..|..+.+.++..+...|+.- ..||+.|+.|.|+...
T Consensus 221 li~~lRlIKSpaEl~~Mr~a~~I~sq~~~~~m~~sr~~~~E~~l~a~~eye~r~rGad~-----~AYpPVVAgG~na~tI 295 (488)
T KOG2414|consen 221 LIERLRLIKSPAELELMREACNIASQTFSETMFGSRDFHNEAALSALLEYECRRRGADR-----LAYPPVVAGGKNANTI 295 (488)
T ss_pred HHHHHHccCCHHHHHHHHHHhhhhhHHHHHHHhhccCCcchhhHhhhhhhheeecCccc-----cccCCeeecCcccceE
Confidence 46788999999999999999999999999999889999999999999999999999975 3689999999999999
Q ss_pred cCCCCCCCCCCCCEEEEEecceeCcEEEeeeeEEEc-CCCCHHHHHHHHHHHHHHHHHHHHcCC--CCCHhHHHhh
Q 025136 183 HGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFC-GDVDDEARNLVKVTKDCLHKAISVCAP--GMEYKKIGKT 255 (257)
Q Consensus 183 Hg~p~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~v-G~~~~e~~~l~~~~~ea~~~ai~~lkP--G~~~~dI~~a 255 (257)
||.-++..|.++|.|++|.|+.++||.+|+||||.+ |+.++.|++||+++++.++..|+.|+| |.+..+|+..
T Consensus 296 HY~~Nnq~l~d~emVLvDaGcelgGYvSDITRTWP~sGkFs~~Qr~LYeavL~vq~ecik~c~~~~g~sL~~l~~~ 371 (488)
T KOG2414|consen 296 HYVRNNQLLKDDEMVLVDAGCELGGYVSDITRTWPISGKFSDAQRDLYEAVLQVQEECIKYCKPSNGTSLSQLFER 371 (488)
T ss_pred EEeecccccCCCcEEEEecCcccCceEccceeccCCCCccCcHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHH
Confidence 999999999999999999999999999999999999 999999999999999999999999999 9999999864
No 34
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=99.54 E-value=5e-14 Score=129.33 Aligned_cols=147 Identities=22% Similarity=0.423 Sum_probs=123.8
Q ss_pred CCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCC--CCC---CCCCCCCCceeeecCCCCcc
Q 025136 108 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGA--YPS---PLGYGGFPKSVCTSVNECIC 182 (257)
Q Consensus 108 R~VKs~~EIe~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga--~ps---~l~y~gfp~~v~sg~n~~~~ 182 (257)
-.+-++..+..+|-|++|+..++..+.+.++||.+..||+.....++.+.-. |-. .--.-.||+ |+++|+++|
T Consensus 13 ~tia~~~vvtKYk~AgeI~n~~lk~V~~~~~~gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfPT--~Isvnncv~ 90 (398)
T KOG2776|consen 13 KTIANDSVVTKYKMAGEIVNKVLKSVVELCQPGASVREICEKGDSLILEETGKIYKKEKDFEKGIAFPT--SISVNNCVC 90 (398)
T ss_pred cccccHHHHhhhhhHHHHHHHHHHHHHHHhcCCchHHHHHHhhhHHHHHHHHHHHhhhhhhhccccccc--eecccceee
Confidence 3567889999999999999999999999999999999999988888765421 211 001124775 567999999
Q ss_pred cCCCC----CCCCCCCCEEEEEecceeCcEEEeeeeEEEcCCC-----CHHHHHHHHHHHHHHHHHHHHcCCCCCHhHHH
Q 025136 183 HGIPD----SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDV-----DDEARNLVKVTKDCLHKAISVCAPGMEYKKIG 253 (257)
Q Consensus 183 Hg~p~----~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~vG~~-----~~e~~~l~~~~~ea~~~ai~~lkPG~~~~dI~ 253 (257)
|+.|- +..|++||+|.||+|+.+|||.+-++.|++|+.+ +....+++.++.-|.++++..++||.+-..|-
T Consensus 91 h~sPlksd~~~~Lk~GDvVKIdLG~HiDGfiA~vaHT~VV~~~~~~~vtG~kADvI~AAh~A~eaa~rllkpgn~n~~vT 170 (398)
T KOG2776|consen 91 HFSPLKSDADYTLKEGDVVKIDLGVHIDGFIALVAHTIVVGPAPDTPVTGRKADVIAAAHLAAEAALRLLKPGNTNTQVT 170 (398)
T ss_pred ccCcCCCCCcccccCCCEEEEEeeeeeccceeeeeeeEEeccCCCCcccCchhHHHHHHHHHHHHHHHHhCCCCCCchhh
Confidence 99883 5689999999999999999999999999999854 45678899999999999999999999988887
Q ss_pred hhh
Q 025136 254 KTI 256 (257)
Q Consensus 254 ~aI 256 (257)
++|
T Consensus 171 ~~i 173 (398)
T KOG2776|consen 171 RAI 173 (398)
T ss_pred HHH
Confidence 776
No 35
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=99.53 E-value=7.7e-14 Score=137.46 Aligned_cols=162 Identities=15% Similarity=0.236 Sum_probs=129.6
Q ss_pred CCCCCCccCCCCCCCcCCCCcCCHHHHHHHHHHHHHHHHHHHHH-----hhhcCCC--CCHHHHHHHHHHHHHHC----C
Q 025136 90 IPRPPYVNSQKPIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYA-----GTLVKPG--ITTDEIDKAVHQMIIDN----G 158 (257)
Q Consensus 90 i~~P~y~~~~~~~~~~~~R~VKs~~EIe~mR~A~~ia~~al~~~-----~~~ikpG--vTe~EI~~~v~~~i~~~----G 158 (257)
+..-.|...++.-.+..+.+||++.||+.||+|+.++...|... .+.|..| +|..-+...+...+.+. |
T Consensus 117 l~~~~fn~vDis~~ls~l~avKDd~Ei~~irksa~~s~~vm~k~~~~~~~~aiD~ekkvthskLsD~~e~~I~~~k~s~~ 196 (960)
T KOG1189|consen 117 LEAGGFNKVDISLGLSKLFAVKDDEEIANIRKSAAASSAVMNKYLVDELVEAIDEEKKVTHSKLSDLMESAIEDKKYSPG 196 (960)
T ss_pred hhhcCCceeehhhhhhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHHHHHHHHHHhhccccCcc
Confidence 33345555566666788999999999999999999999999833 3344454 67777887777777654 3
Q ss_pred CCCCCCCCCCCCceeeecCCCCc-ccCCCCCCCCCCCCEEEEEecceeCcEEEeeeeEEEcCCCCHHHHHHHHHHHHHHH
Q 025136 159 AYPSPLGYGGFPKSVCTSVNECI-CHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLH 237 (257)
Q Consensus 159 a~ps~l~y~gfp~~v~sg~n~~~-~Hg~p~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~vG~~~~e~~~l~~~~~ea~~ 237 (257)
..|..+.+ .||+++.+|.+... +....+++.| | +|+..+|++|++||+.++|||++ .|+.++++.|+..+.+++
T Consensus 197 l~~~~~d~-cY~PIiqSGg~ydlk~sa~s~~~~L--~-~I~cs~G~RynsYCSNv~RT~Li-dpssemq~nY~fLl~aqe 271 (960)
T KOG1189|consen 197 LDPDLLDM-CYPPIIQSGGKYDLKPSAVSDDNHL--H-VILCSLGIRYNSYCSNVSRTYLI-DPSSEMQENYEFLLAAQE 271 (960)
T ss_pred cCcccccc-ccChhhhcCCccccccccccccccc--c-eEEeeccchhhhhhccccceeee-cchHHHHHHHHHHHHHHH
Confidence 34433443 48999999887643 3445677788 4 99999999999999999999999 789999999999999999
Q ss_pred HHHHHcCCCCCHhHHHhhh
Q 025136 238 KAISVCAPGMEYKKIGKTI 256 (257)
Q Consensus 238 ~ai~~lkPG~~~~dI~~aI 256 (257)
++++.||||+..++|+.++
T Consensus 272 ~il~~lrpG~ki~dVY~~~ 290 (960)
T KOG1189|consen 272 EILKLLRPGTKIGDVYEKA 290 (960)
T ss_pred HHHHhhcCCCchhHHHHHH
Confidence 9999999999999999875
No 36
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=99.41 E-value=1.8e-12 Score=116.97 Aligned_cols=138 Identities=24% Similarity=0.396 Sum_probs=119.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHH----HHCCCCCCCCCCCCCCceeeecCCCCcccCCC
Q 025136 111 HDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMI----IDNGAYPSPLGYGGFPKSVCTSVNECICHGIP 186 (257)
Q Consensus 111 Ks~~EIe~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i----~~~Ga~ps~l~y~gfp~~v~sg~n~~~~Hg~p 186 (257)
-..+..+-+|+|+++..++-.++...|+||||..||+..++... .+.|.... -+||+. .|.|.+..|+.|
T Consensus 80 ~~~~i~~d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl~aG----i~FPtG--~SlN~cAAHyTp 153 (397)
T KOG2775|consen 80 TESDIYQDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGLNAG----IGFPTG--CSLNHCAAHYTP 153 (397)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhcccccc----ccCCCc--ccccchhhhcCC
Confidence 34566778999999999999999999999999999999987643 34454332 468865 578999999998
Q ss_pred C---CCCCCCCCEEEEEecceeCcEEEeeeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHhHHHhhhC
Q 025136 187 D---SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQ 257 (257)
Q Consensus 187 ~---~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~~~dI~~aI~ 257 (257)
+ ..+|+.+|+..||+|...+|-..|++.|+.+ ++....|+.++++|...+|+...-.++.+||+++||
T Consensus 154 NaGd~tVLqydDV~KiDfGthi~GrIiDsAFTv~F---~p~~d~Ll~AvreaT~tGIkeaGiDvRlcdiG~aiq 224 (397)
T KOG2775|consen 154 NAGDKTVLKYDDVMKIDFGTHIDGRIIDSAFTVAF---NPKYDPLLAAVREATNTGIKEAGIDVRLCDIGEAIQ 224 (397)
T ss_pred CCCCceeeeecceEEEeccccccCeEeeeeeEEee---CccccHHHHHHHHHHhhhhhhcCceeeehhhhHHHH
Confidence 6 4689999999999999999999999999999 456678999999999999999999999999999985
No 37
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=99.30 E-value=1.2e-11 Score=120.23 Aligned_cols=142 Identities=13% Similarity=0.097 Sum_probs=118.8
Q ss_pred CCcCCCCcCCHHHHHHHHHHHHHHHHHHHHHhh----hcCCC--CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeee-
Q 025136 103 GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGT----LVKPG--ITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCT- 175 (257)
Q Consensus 103 ~~~~~R~VKs~~EIe~mR~A~~ia~~al~~~~~----~ikpG--vTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~s- 175 (257)
.+..++++|+++|++.||.|----..|+.+... .+.-| +||.+++..++++-..+..+-. ..|+++..+
T Consensus 300 pi~~~kAiKN~~E~~gmr~shirD~~Alve~~~wle~~~~~g~~itE~~~A~kle~fR~~~~~fmg----lSFeTIS~s~ 375 (606)
T KOG2413|consen 300 PISRAKAIKNDDELKGMRNSHIRDGAALVEYFAWLEKELHKGYTITEYDAADKLEEFRSRQDHFMG----LSFETISSSV 375 (606)
T ss_pred HHHHHHHhcChHHhhhhhhcchhhHHHHHHHHHHHhhhhhcCcccchhhHHHHHHHHHHhhccccC----cCcceeeccC
Confidence 455678999999999999886555555554444 45567 8999999999998887766542 359999866
Q ss_pred cCCCCcccCCCC---CCCCCCCCEEEEEecceeCcEEEeeeeEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCC
Q 025136 176 SVNECICHGIPD---SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGME 248 (257)
Q Consensus 176 g~n~~~~Hg~p~---~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~ 248 (257)
|+|.+++|+.|. ++.+.+..+.++|.|+.|.--.+|+|||+.+|+|++++++.|..+++.+-+...+..|-.+
T Consensus 376 G~NgAviHYsP~~e~n~~i~~~kiyL~DSGaQY~DGTTDvTRT~HfgePs~eek~~yT~VLkGhi~la~~vFP~~t 451 (606)
T KOG2413|consen 376 GPNGAVIHYSPPAETNRIVSPDKIYLCDSGAQYLDGTTDVTRTVHFGEPTAEEKEAYTLVLKGHIALARAVFPKGT 451 (606)
T ss_pred CCCceeeecCCCccccceecCceEEEEccCcccccCccceeEEEecCCCCHHHHHHHHHHHHhhhHhhhcccCCCC
Confidence 999999999986 4589999999999999998888999999999999999999999999999999998877543
No 38
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=98.98 E-value=1.5e-09 Score=105.94 Aligned_cols=160 Identities=17% Similarity=0.217 Sum_probs=115.5
Q ss_pred CCccCCCCCCCcCCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhc----CCC--CCHHHHHHHHHHHHHHC----------
Q 025136 94 PYVNSQKPIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLV----KPG--ITTDEIDKAVHQMIIDN---------- 157 (257)
Q Consensus 94 ~y~~~~~~~~~~~~R~VKs~~EIe~mR~A~~ia~~al~~~~~~i----kpG--vTe~EI~~~v~~~i~~~---------- 157 (257)
.|...+++-.+..+-.+|+.+||+.+|.+++.....|....+.+ -.+ +|...+...+...+-+-
T Consensus 154 efN~~DvslgLsk~~~~KD~~E~an~~~ss~~s~~~M~~~~~em~~~~D~~~kit~~KlsD~mes~iddv~f~q~~s~~l 233 (1001)
T COG5406 154 EFNASDVSLGLSKMFLTKDAEEIANCRASSAASSVLMRYFVKEMEMLWDGAFKITHGKLSDLMESLIDDVEFFQTKSLKL 233 (1001)
T ss_pred hcchhhhhhhhhHHhccccHHHHhhccccchHHHHHHHHHHHHHHHHHhhhhhhccchHHHHhhhhcchhhhhhhcCccc
Confidence 34444555557788999999999999999999999888544332 222 44444444444322211
Q ss_pred CCC-CCCCCCCCCCceeeecCCC-CcccCCCCCCCCCCCCEEEEEecceeCcEEEeeeeEEEcCCCCHHHHHHHHHHHHH
Q 025136 158 GAY-PSPLGYGGFPKSVCTSVNE-CICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDC 235 (257)
Q Consensus 158 Ga~-ps~l~y~gfp~~v~sg~n~-~~~Hg~p~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~vG~~~~e~~~l~~~~~ea 235 (257)
|-. -..|.| .|.+++.+|..- ..+..+..++.| -||+|...+|.+|+|||+.++|||++ +|+.++++-|+-++.+
T Consensus 234 ~~~~~d~lew-~ytpiiqsg~~~Dl~psa~s~~~~l-~gd~vl~s~GiRYn~YCSn~~RT~l~-dp~~e~~~Ny~fl~~l 310 (1001)
T COG5406 234 GDIDLDQLEW-CYTPIIQSGGSIDLTPSAFSFPMEL-TGDVVLLSIGIRYNGYCSNMSRTILT-DPDSEQQKNYEFLYML 310 (1001)
T ss_pred cccchhhhhh-hcchhhccCceeecccccccCchhh-cCceEEEEeeeeeccccccccceEEe-CCchHhhhhHHHHHHH
Confidence 110 011333 267888887643 333334444554 48999999999999999999999999 7899999999999999
Q ss_pred HHHHHHHcCCCCCHhHHHhhh
Q 025136 236 LHKAISVCAPGMEYKKIGKTI 256 (257)
Q Consensus 236 ~~~ai~~lkPG~~~~dI~~aI 256 (257)
+...+..||||...++|+..+
T Consensus 311 Qk~i~~~~rpG~~~g~iY~~~ 331 (1001)
T COG5406 311 QKYILGLVRPGTDSGIIYSEA 331 (1001)
T ss_pred HHHHHhhcCCCCCchhHHHHH
Confidence 999999999999999998764
No 39
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=97.76 E-value=0.00057 Score=57.33 Aligned_cols=102 Identities=21% Similarity=0.260 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCCCCCCCCCCE
Q 025136 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDT 196 (257)
Q Consensus 117 e~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~~~Hg~p~~r~L~~GDi 196 (257)
+.++++.+.+.++++.+.+.++||+|..||...+.+.+.++|.........| ..+.....+...-....+.+|++|.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~g~~~~~~~~~G--h~iG~~~~e~~~~~~~~~~~l~~gmv 179 (207)
T cd01066 102 DEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEHGLGPNFGHRTG--HGIGLEIHEPPVLKAGDDTVLEPGMV 179 (207)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCccccCCCCCc--cccCcccCCCCCcCCCCCCCcCCCCE
Confidence 5788899999999999999999999999999999999999987421111111 12222221111101124578999999
Q ss_pred EEEEecceeC-cEEEeeeeEEEcCC
Q 025136 197 INIDVTVYLN-GYHGDTSATFFCGD 220 (257)
Q Consensus 197 V~iDvg~~~~-GY~aD~tRT~~vG~ 220 (257)
+.++.+.+.. ++..-+.-|++|.+
T Consensus 180 ~~iep~~~~~~~~g~~~ed~v~vt~ 204 (207)
T cd01066 180 FAVEPGLYLPGGGGVRIEDTVLVTE 204 (207)
T ss_pred EEECCEEEECCCcEEEeeeEEEEeC
Confidence 9999998877 58888999999853
No 40
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=97.56 E-value=0.0012 Score=56.20 Aligned_cols=100 Identities=23% Similarity=0.284 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCC-CCCCCCCCC
Q 025136 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP-DSRALEDGD 195 (257)
Q Consensus 117 e~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~~~Hg~p-~~r~L~~GD 195 (257)
+.+|++.+.+.++++.+.+.++||++..||.+.+++.+.++|..+......|+ .+.....+. +...+ ++++|++|.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~~g~~~~~~~~~Gh--~iG~~~~e~-p~i~~~~~~~l~~gm 179 (208)
T cd01092 103 DELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEEAGYGEYFIHRTGH--GVGLEVHEA-PYISPGSDDVLEEGM 179 (208)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCccccCCCCCcc--ccCcccCcC-CCcCCCCCCCcCCCC
Confidence 36678888999999999999999999999999999999999975421111121 121111111 11112 467899999
Q ss_pred EEEEEecceeCcE-EEeeeeEEEcC
Q 025136 196 TINIDVTVYLNGY-HGDTSATFFCG 219 (257)
Q Consensus 196 iV~iDvg~~~~GY-~aD~tRT~~vG 219 (257)
++.|+.+.+..|+ -.-+..|++|.
T Consensus 180 v~~iep~~~~~~~~g~~~ed~v~vt 204 (208)
T cd01092 180 VFTIEPGIYIPGKGGVRIEDDVLVT 204 (208)
T ss_pred EEEECCeEEecCCCEEEeeeEEEEC
Confidence 9999988876544 34467888874
No 41
>PRK05716 methionine aminopeptidase; Validated
Probab=97.38 E-value=0.0022 Score=56.68 Aligned_cols=100 Identities=19% Similarity=0.224 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCC--CcccC-CC-CCCCCCC
Q 025136 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE--CICHG-IP-DSRALED 193 (257)
Q Consensus 118 ~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~--~~~Hg-~p-~~r~L~~ 193 (257)
..|++.+.+.++.+.+.+.++||++-.||.+.+++.+.+.|..+. .++.|+. +.....+ .+.++ .+ ++.+|++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~pG~~~~dv~~~~~~~~~~~g~~~~-~~~~GHg--iG~~~~e~p~~~~~~~~~~~~~le~ 195 (252)
T PRK05716 119 EDKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQKYAEAEGFSVV-REYCGHG--IGRKFHEEPQIPHYGAPGDGPVLKE 195 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCeee-cCccccc--cCCccCCCCccCcCCCCCCCCEecC
Confidence 356677788888899999999999999999999999999987652 2232332 2222221 11221 12 3678999
Q ss_pred CCEEEEEeccee------------------CcEEEeeeeEEEcCC
Q 025136 194 GDTINIDVTVYL------------------NGYHGDTSATFFCGD 220 (257)
Q Consensus 194 GDiV~iDvg~~~------------------~GY~aD~tRT~~vG~ 220 (257)
|.++.|+.+.+. +++-.-+.-|++|.+
T Consensus 196 Gmv~~vEp~i~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~Vt~ 240 (252)
T PRK05716 196 GMVFTIEPMINAGKREVKTLKDGWTVVTKDGSLSAQYEHTVAVTE 240 (252)
T ss_pred CCEEEEccEEEcCCCceEEcCCCCEEEccCCCcEEeeeeEEEEcC
Confidence 999999987764 345566788888854
No 42
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=97.26 E-value=0.0046 Score=54.63 Aligned_cols=100 Identities=19% Similarity=0.112 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCC--cccCC--CCCCCCCC
Q 025136 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC--ICHGI--PDSRALED 193 (257)
Q Consensus 118 ~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~--~~Hg~--p~~r~L~~ 193 (257)
.+|++.+.+.++++.+.+.++||+|-.||...+.+.+.+.|..+. .++.|+ .+.....+. ++++. .++.+|++
T Consensus 117 ~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~g~~~~-~~~~GH--giG~~~~e~p~i~~~~~~~~~~~l~~ 193 (247)
T TIGR00500 117 EAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEAKGFSVV-REYCGH--GIGRKFHEEPQIPNYGKKFTNVRLKE 193 (247)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEec-cCccCC--ccCcccCCCCccCCcCcCCCCCEecC
Confidence 356777788888899999999999999999999999999987542 222222 233332221 22211 23678999
Q ss_pred CCEEEEEeccee------------------CcEEEeeeeEEEcCC
Q 025136 194 GDTINIDVTVYL------------------NGYHGDTSATFFCGD 220 (257)
Q Consensus 194 GDiV~iDvg~~~------------------~GY~aD~tRT~~vG~ 220 (257)
|.++.|+.+.+. +++-.-+..|++|.+
T Consensus 194 gmv~~iEp~i~~~~~~~~~~~~~~~~~~~~~~~g~ried~v~Vt~ 238 (247)
T TIGR00500 194 GMVFTIEPMVNTGTEEITTAADGWTVKTKDGSLSAQFEHTIVITD 238 (247)
T ss_pred CCEEEEeeEEEcCCCcEEECCCCCEEEccCCCeEEEEeEEEEEcC
Confidence 999999988765 235556778888843
No 43
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=97.25 E-value=0.0051 Score=53.88 Aligned_cols=100 Identities=20% Similarity=0.244 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCC--Ccc-cCCC-CCCCCCC
Q 025136 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE--CIC-HGIP-DSRALED 193 (257)
Q Consensus 118 ~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~--~~~-Hg~p-~~r~L~~ 193 (257)
.+|++.+.+.++.+.+.+.++||++-.||.+.+.+.+.+.|... ...+.|+. +.....+ .+. +..+ ++.+|++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~G~~~-~~~~~GHg--iG~~~~e~p~~~~~~~~~~~~~le~ 185 (238)
T cd01086 109 EAKKLVEVTEEALYKGIEAVKPGNRIGDIGHAIEKYAEKNGYSV-VREFGGHG--IGRKFHEEPQIPNYGRPGTGPKLKP 185 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcce-ecCccccC--CCCccccCCCcCCccCCCCCCEecC
Confidence 35677888888999999999999999999999999999998754 22232322 2222111 111 2223 3678999
Q ss_pred CCEEEEEeccee------------------CcEEEeeeeEEEcCC
Q 025136 194 GDTINIDVTVYL------------------NGYHGDTSATFFCGD 220 (257)
Q Consensus 194 GDiV~iDvg~~~------------------~GY~aD~tRT~~vG~ 220 (257)
|.++.++.+.++ +.+-.-+..|++|.+
T Consensus 186 Gmv~~iep~i~~~~~~~~~~~~~~~~~~~~g~~g~~~edtv~Vte 230 (238)
T cd01086 186 GMVFTIEPMINLGTYEVVTLPDGWTVVTKDGSLSAQFEHTVLITE 230 (238)
T ss_pred CCEEEEeeEEECCCCceEECCCCCEEEcCCCCEEEeeeeEEEEcC
Confidence 999999988764 223445667888853
No 44
>PRK15173 peptidase; Provisional
Probab=97.22 E-value=0.0045 Score=57.42 Aligned_cols=101 Identities=13% Similarity=0.095 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCC-CCCCCCCCCCE
Q 025136 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGI-PDSRALEDGDT 196 (257)
Q Consensus 118 ~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~~~Hg~-p~~r~L~~GDi 196 (257)
..|++.+++.++.+.+.+.++||++-.||...+.+.+.+.|.......+.|+.-.+..|.++. +... .++.+|++|.+
T Consensus 203 ~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~~~~~~~G~~~~~~~~~GHGiG~~lg~~E~-P~i~~~~~~~Le~GMV 281 (323)
T PRK15173 203 ITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNYNRGHLGHGNGVFLGLEES-PFVSTHATESFTSGMV 281 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCCCcCCCCCCcCCC-CCCCCCCCCccCCCCE
Confidence 456778888899999999999999999999999999999986433222222211111233321 1111 24578999999
Q ss_pred EEEEecceeCc-EEEeeeeEEEcC
Q 025136 197 INIDVTVYLNG-YHGDTSATFFCG 219 (257)
Q Consensus 197 V~iDvg~~~~G-Y~aD~tRT~~vG 219 (257)
+.|+.+.+..| +-.-+..|++|.
T Consensus 282 ~tiEPgiy~~g~ggvriEDtvlVT 305 (323)
T PRK15173 282 LSLETPYYGYNLGSIMIEDMILIN 305 (323)
T ss_pred EEECCEEEcCCCcEEEEeeEEEEc
Confidence 99998876433 235678999984
No 45
>PRK14575 putative peptidase; Provisional
Probab=97.15 E-value=0.0055 Score=58.57 Aligned_cols=99 Identities=12% Similarity=0.118 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceee--ecCCCC--cccCCCCCCCCCC
Q 025136 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVC--TSVNEC--ICHGIPDSRALED 193 (257)
Q Consensus 118 ~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~--sg~n~~--~~Hg~p~~r~L~~ 193 (257)
..|++.+++.++.+.+.+.++||+|-.||++.+.+.+.+.|.......+.| ..+. .|.++. +.+ -++.+|++
T Consensus 286 ~~~~~~~~~~~a~~~~~~~~rpG~~~~dv~~a~~~~~~~~G~~~~~~~~~G--HGiG~~lg~~e~P~i~~--~~~~~Le~ 361 (406)
T PRK14575 286 ITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNYNRGHLG--HGNGVFLGLEESPFVST--HATESFTS 361 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCC--CcccCCCCCccCCCCCC--CCCCCcCC
Confidence 356777888899999999999999999999999999999886433222212 2222 233221 111 24578999
Q ss_pred CCEEEEEecceeCc-EEEeeeeEEEcCC
Q 025136 194 GDTINIDVTVYLNG-YHGDTSATFFCGD 220 (257)
Q Consensus 194 GDiV~iDvg~~~~G-Y~aD~tRT~~vG~ 220 (257)
|.++.+..+.+..| +-.-+.-|++|.+
T Consensus 362 GMv~tiEpgiy~~g~gGvriEDtvlVT~ 389 (406)
T PRK14575 362 GMVLSLETPYYGYNLGSIMIEDMILINK 389 (406)
T ss_pred CCEEEECCeeecCCCcEEEEEeEEEEcC
Confidence 99999998887544 3356889999953
No 46
>PRK09795 aminopeptidase; Provisional
Probab=97.13 E-value=0.008 Score=56.33 Aligned_cols=105 Identities=17% Similarity=0.187 Sum_probs=74.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCC-CCCC
Q 025136 112 DEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP-DSRA 190 (257)
Q Consensus 112 s~~EIe~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~~~Hg~p-~~r~ 190 (257)
.+++-+.++++-+++.++.+.+.+.++||++-.||++.+.+.+.+.|....+....|+ .+.....+. |.-.| ++.+
T Consensus 235 ~~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~~~~~~~g~~~~~~h~~GH--giGl~~he~-p~i~~~~~~~ 311 (361)
T PRK09795 235 VSAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAARRVITEAGYGDYFGHNTGH--AIGIEVHED-PRFSPRDTTT 311 (361)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCccCCCCCCc--cCCccccCC-CCcCCCCCCC
Confidence 3555556888999999999999999999999999999999999998865432221222 222222221 22122 3578
Q ss_pred CCCCCEEEEEecceeCcE-EEeeeeEEEcC
Q 025136 191 LEDGDTINIDVTVYLNGY-HGDTSATFFCG 219 (257)
Q Consensus 191 L~~GDiV~iDvg~~~~GY-~aD~tRT~~vG 219 (257)
|++|.++.|+.+.+..|+ -.-+.-|++|.
T Consensus 312 l~~gmv~~iEpgiy~~~~~gvriEd~v~vt 341 (361)
T PRK09795 312 LQPGMLLTVEPGIYLPGQGGVRIEDVVLVT 341 (361)
T ss_pred cCCCCEEEECCEEEeCCCCEEEEeeEEEEC
Confidence 999999999999886553 34567888884
No 47
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=97.10 E-value=0.0087 Score=52.70 Aligned_cols=100 Identities=15% Similarity=0.128 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccC-----C-CCCCCC
Q 025136 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHG-----I-PDSRAL 191 (257)
Q Consensus 118 ~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~~~Hg-----~-p~~r~L 191 (257)
..|++.+++.++++.+.+.++||+|-.||++.+.+.+.++|...... .++...+....++. +|+ . .++.+|
T Consensus 110 ~~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~~G~~~~~~--~~~GHgiGl~~he~-~~~~g~~~~~~~~~~L 186 (228)
T cd01090 110 AHLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYREHDLLRYRT--FGYGHSFGVLSHYY-GREAGLELREDIDTVL 186 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCcccc--cccCcccccccccC-CCccccccCCCCCCcc
Confidence 36778888999999999999999999999999999999998654211 11222333222222 221 1 135889
Q ss_pred CCCCEEEEEecceeC----cE-EEeeeeEEEcCC
Q 025136 192 EDGDTINIDVTVYLN----GY-HGDTSATFFCGD 220 (257)
Q Consensus 192 ~~GDiV~iDvg~~~~----GY-~aD~tRT~~vG~ 220 (257)
++|.++.++.+.++. |. -.-+..|++|.+
T Consensus 187 e~GMV~~iEP~i~~~~~~~g~gG~ried~v~Vt~ 220 (228)
T cd01090 187 EPGMVVSMEPMIMLPEGQPGAGGYREHDILVINE 220 (228)
T ss_pred CCCCEEEECCEEeecccCCCCcEEEeeeEEEECC
Confidence 999999999988752 22 223788888853
No 48
>PRK14576 putative endopeptidase; Provisional
Probab=97.06 E-value=0.0086 Score=57.21 Aligned_cols=99 Identities=12% Similarity=0.033 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceee--ecCCCCcccCCC-CCCCCCCC
Q 025136 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVC--TSVNECICHGIP-DSRALEDG 194 (257)
Q Consensus 118 ~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~--sg~n~~~~Hg~p-~~r~L~~G 194 (257)
..+++-+++.++.+.+.+.++||++-.||+..+.+.+.+.|......+..|+ .++ .|..+. +...+ ++.+|++|
T Consensus 285 ~~~~~~~~~~~a~~a~~~~~rPG~~~~dv~~a~~~~~~~~G~~~~~~~~~GH--giG~~l~~~e~-P~i~~~~~~~Le~G 361 (405)
T PRK14576 285 LTQQIYDTIRTGHEHMLSMVAPGVKLKAVFDSTMAVIKTSGLPHYNRGHLGH--GDGVFLGLEEV-PFVSTQATETFCPG 361 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCCC--CCCCCCCcCcC-CCcCCCCCCccCCC
Confidence 4667788889999999999999999999999999999999874332222222 222 333322 22222 46789999
Q ss_pred CEEEEEecceeCc-EEEeeeeEEEcC
Q 025136 195 DTINIDVTVYLNG-YHGDTSATFFCG 219 (257)
Q Consensus 195 DiV~iDvg~~~~G-Y~aD~tRT~~vG 219 (257)
.++.++.+.+..| .-.-+.-|++|.
T Consensus 362 Mv~~vEp~~y~~g~ggvriEDtvlVT 387 (405)
T PRK14576 362 MVLSLETPYYGIGVGSIMLEDMILIT 387 (405)
T ss_pred CEEEECCceeecCCCEEEEeeEEEEC
Confidence 9999997766443 233478899984
No 49
>PRK12897 methionine aminopeptidase; Reviewed
Probab=97.04 E-value=0.0062 Score=54.12 Aligned_cols=100 Identities=17% Similarity=0.175 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCC--CcccCC-C-CCCCCCC
Q 025136 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE--CICHGI-P-DSRALED 193 (257)
Q Consensus 118 ~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~--~~~Hg~-p-~~r~L~~ 193 (257)
..|++.+++.++++.+.+.++||++..|++..+.+.+.+.|.... .++.|+ .|.....+ .+.++. + +..+|++
T Consensus 118 ~~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~~~g~~~~-~~~~GH--giGl~~hE~P~i~~~~~~~~~~~l~~ 194 (248)
T PRK12897 118 EAEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVANEGFSVA-RDFTGH--GIGKEIHEEPAIFHFGKQGQGPELQE 194 (248)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHcCCccC-CCeEEC--ccCCcccCCCccCCCCCCCCCCCcCC
Confidence 355666788888999999999999999999999999999987532 222222 23333222 122221 2 3468999
Q ss_pred CCEEEEEeccee-----------------Cc-EEEeeeeEEEcCC
Q 025136 194 GDTINIDVTVYL-----------------NG-YHGDTSATFFCGD 220 (257)
Q Consensus 194 GDiV~iDvg~~~-----------------~G-Y~aD~tRT~~vG~ 220 (257)
|.++.+..+.+. +| +-.-+..|++|.+
T Consensus 195 Gmv~tiEP~~~~~~~~~~~~~~~~~~~~~~g~~g~r~edtv~Vt~ 239 (248)
T PRK12897 195 GMVITIEPIVNVGMRYSKVDLNGWTARTMDGKLSAQYEHTIAITK 239 (248)
T ss_pred CCEEEECCeEecCCCceEECCCCcEEEcCCCCeEeecceEEEEeC
Confidence 999999988762 34 5667788888853
No 50
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=96.98 E-value=0.0093 Score=53.20 Aligned_cols=102 Identities=15% Similarity=0.108 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCC--CCCCCCCCCCCceeeecCCCCcccCCC-CCCCCCC
Q 025136 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGA--YPSPLGYGGFPKSVCTSVNECICHGIP-DSRALED 193 (257)
Q Consensus 117 e~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga--~ps~l~y~gfp~~v~sg~n~~~~Hg~p-~~r~L~~ 193 (257)
+..|++.+++.++.+++.+.++||++-.||...+.+.+.+.|. ...... +....+....++....-.+ ++++|++
T Consensus 119 ~~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~~~~~~~~~~~~--~~GHgiGle~hE~~~~l~~~~~~~L~~ 196 (243)
T cd01091 119 SEQQKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKKKKPELEPNFTK--NLGFGIGLEFRESSLIINAKNDRKLKK 196 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHhChhHHHhCcC--CcccccCcccccCccccCCCCCCCcCC
Confidence 3567788888999999999999999999999999999988752 111111 1112233333332111112 3578999
Q ss_pred CCEEEEEecce-e----------CcEEEeeeeEEEcCC
Q 025136 194 GDTINIDVTVY-L----------NGYHGDTSATFFCGD 220 (257)
Q Consensus 194 GDiV~iDvg~~-~----------~GY~aD~tRT~~vG~ 220 (257)
|.++.+..|.+ + +.|-.-++-|++|.+
T Consensus 197 GMvf~vepGi~~~~~~~~~~~~~~~~gv~ieDtV~Vt~ 234 (243)
T cd01091 197 GMVFNLSIGFSNLQNPEPKDKESKTYALLLSDTILVTE 234 (243)
T ss_pred CCEEEEeCCcccccCccccCccCCeeEEEEEEEEEEcC
Confidence 99999999987 3 257778899999954
No 51
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=96.97 E-value=0.0083 Score=56.99 Aligned_cols=98 Identities=16% Similarity=0.225 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCC----cccCCC-CCCCCC
Q 025136 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC----ICHGIP-DSRALE 192 (257)
Q Consensus 118 ~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~----~~Hg~p-~~r~L~ 192 (257)
.++++.+++.++.+.+.+.++||+|-.||++.+.+.+.+.|... .+..|++ +..+.... .+.-.+ ++.+|+
T Consensus 271 ~~~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~~~~~~~~G~~~--~h~~Ghg--iGl~~~~~~~e~~~~l~~~~~~~L~ 346 (391)
T TIGR02993 271 AFLDAEKAVLEGMEAGLEAAKPGNTCEDIANAFFAVLKKYGIHK--DSRTGYP--IGLSYPPDWGERTMSLRPGDNTVLK 346 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCcc--CCCceee--eccCcCCCCCCccccccCCCCceec
Confidence 46678888999999999999999999999999999999988653 1222332 22221100 111112 357899
Q ss_pred CCCEEEEEecceeCcEEEeeeeEEEcC
Q 025136 193 DGDTINIDVTVYLNGYHGDTSATFFCG 219 (257)
Q Consensus 193 ~GDiV~iDvg~~~~GY~aD~tRT~~vG 219 (257)
+|.++.+.-+.+..|+-.-+.-|++|.
T Consensus 347 ~GMv~tvEpgiy~~~~Gvried~v~VT 373 (391)
T TIGR02993 347 PGMTFHFMTGLWMEDWGLEITESILIT 373 (391)
T ss_pred CCCEEEEcceeEeCCCCeEEeeEEEEC
Confidence 999999999998877766788899984
No 52
>PRK08671 methionine aminopeptidase; Provisional
Probab=96.96 E-value=0.015 Score=53.21 Aligned_cols=97 Identities=20% Similarity=0.185 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCC-----CCcccC-CCCCCCC
Q 025136 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVN-----ECICHG-IPDSRAL 191 (257)
Q Consensus 118 ~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n-----~~~~Hg-~p~~r~L 191 (257)
..+++.+.+.++++.+.+.++||++..||.+.+++.+.+.|..+. .+..|+. + |.+ -.++.. ..++.+|
T Consensus 102 ~~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~~~G~~~~-~~~~GHg--i--G~~~~he~p~ip~~~~~~~~~l 176 (291)
T PRK08671 102 KYEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIRSYGFKPI-RNLTGHG--L--ERYELHAGPSIPNYDEGGGVKL 176 (291)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccc-CCCcccC--c--CCCcccCCCccCccCCCCCcee
Confidence 456777888888999999999999999999999999999998663 2222221 1 111 011211 1236789
Q ss_pred CCCCEEEEEecce-eCcEEEeeeeEEEcC
Q 025136 192 EDGDTINIDVTVY-LNGYHGDTSATFFCG 219 (257)
Q Consensus 192 ~~GDiV~iDvg~~-~~GY~aD~tRT~~vG 219 (257)
++|+++.|+.... -.|+..|..+|-...
T Consensus 177 e~GmV~aIEp~~t~G~G~v~~~~~~~iy~ 205 (291)
T PRK08671 177 EEGDVYAIEPFATDGEGKVVEGPEVEIYS 205 (291)
T ss_pred CCCCEEEEcceEECCCCeEecCCceEEEe
Confidence 9999999998765 468888888877764
No 53
>PRK12318 methionine aminopeptidase; Provisional
Probab=96.96 E-value=0.01 Score=54.41 Aligned_cols=86 Identities=19% Similarity=0.203 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCC--CcccCCC-CCCCCCCC
Q 025136 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE--CICHGIP-DSRALEDG 194 (257)
Q Consensus 118 ~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~--~~~Hg~p-~~r~L~~G 194 (257)
.+|++...+.++++.+.+.++||++..||+..+.+.+.+.|.... ..+.|+ .|.....+ .+.+..+ ++.+|++|
T Consensus 159 ~~~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~~~~~~~G~~~~-~~~~GH--gIGl~~hE~P~i~~~~~~~~~~L~~G 235 (291)
T PRK12318 159 IKKKVCQASLECLNAAIAILKPGIPLYEIGEVIENCADKYGFSVV-DQFVGH--GVGIKFHENPYVPHHRNSSKIPLAPG 235 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccC-CCcccC--CcCccccCCCcccCcCCCCCCEeCCC
Confidence 456778888899999999999999999999999999999887532 122222 23333222 1222222 24679999
Q ss_pred CEEEEEecceeC
Q 025136 195 DTINIDVTVYLN 206 (257)
Q Consensus 195 DiV~iDvg~~~~ 206 (257)
.++.|+.+.+..
T Consensus 236 MV~~iEP~i~~~ 247 (291)
T PRK12318 236 MIFTIEPMINVG 247 (291)
T ss_pred CEEEECCEEEcC
Confidence 999999877654
No 54
>PRK12896 methionine aminopeptidase; Reviewed
Probab=96.87 E-value=0.017 Score=51.18 Aligned_cols=99 Identities=22% Similarity=0.209 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCC---cccC-CC-CCCCCCC
Q 025136 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC---ICHG-IP-DSRALED 193 (257)
Q Consensus 119 mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~---~~Hg-~p-~~r~L~~ 193 (257)
.+++...+.++++.+.+.++||++-.||.+.+.+.+.+.|.... .++.|+. +.....+. +.++ .+ ++.+|++
T Consensus 125 ~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~G~~~~-~~~~GHg--iG~~~he~p~~~~~~~~~~~~~~le~ 201 (255)
T PRK12896 125 AEKLCRVAEEALWAGIKQVKAGRPLNDIGRAIEDFAKKNGYSVV-RDLTGHG--VGRSLHEEPSVILTYTDPLPNRLLRP 201 (255)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEec-cCcccCC--cCcccccCCCccccCCCCCCCCEecC
Confidence 55677777888888999999999999999999999999987431 2222322 22221111 1111 13 3578999
Q ss_pred CCEEEEEeccee------------------CcEEEeeeeEEEcCC
Q 025136 194 GDTINIDVTVYL------------------NGYHGDTSATFFCGD 220 (257)
Q Consensus 194 GDiV~iDvg~~~------------------~GY~aD~tRT~~vG~ 220 (257)
|.++.|+.+.+. +++..-+.-|++|.+
T Consensus 202 GmV~~iEp~i~~g~~~~~~~~~~~~~~~~~~~~~~~~edtv~vt~ 246 (255)
T PRK12896 202 GMTLAVEPFLNLGAKDAETLDDGWTVVTPDKSLSAQFEHTVVVTR 246 (255)
T ss_pred CcEEEEeceEEcCCCceEEcCCCCEEEecCCCeEEEEEEEEEEcC
Confidence 999999976642 345556888998854
No 55
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=96.80 E-value=0.017 Score=52.82 Aligned_cols=97 Identities=21% Similarity=0.169 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCC---C--CcccC-CCCCCCC
Q 025136 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVN---E--CICHG-IPDSRAL 191 (257)
Q Consensus 118 ~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n---~--~~~Hg-~p~~r~L 191 (257)
..++..+.+.++++.+.+.++||++-.||.+.+++.+.+.|..+. .++.|+. + |.+ + .++.. ..++.+|
T Consensus 101 ~~~~l~ea~~~A~~~ai~~ikPG~~~~dV~~ai~~~i~~~G~~~~-~~~~GHg--i--g~~~~h~~~~ip~~~~~~~~~l 175 (291)
T cd01088 101 KYDDLLEAAKEALNAAIKEAGPDVRLGEIGEAIEEVIESYGFKPI-RNLTGHS--I--ERYRLHAGKSIPNVKGGEGTRL 175 (291)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCEEe-ecCCccC--c--cCccccCCCccCccCCCCCCEe
Confidence 456777888899999999999999999999999999999998763 2222221 1 211 0 11111 1235789
Q ss_pred CCCCEEEEEecce-eCcEEEeeeeEEEcC
Q 025136 192 EDGDTINIDVTVY-LNGYHGDTSATFFCG 219 (257)
Q Consensus 192 ~~GDiV~iDvg~~-~~GY~aD~tRT~~vG 219 (257)
++|+++.||.... -.|+..+-.+|-...
T Consensus 176 e~gmV~aIEp~~s~G~G~v~~~~~~~iy~ 204 (291)
T cd01088 176 EEGDVYAIEPFATTGKGYVHDGPECSIYM 204 (291)
T ss_pred CCCCEEEEceeEECCCCeeecCCceEEEE
Confidence 9999999998765 357777767666664
No 56
>PRK07281 methionine aminopeptidase; Reviewed
Probab=96.76 E-value=0.015 Score=53.24 Aligned_cols=85 Identities=12% Similarity=0.076 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCC--cccC-CC-CCCCCCC
Q 025136 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC--ICHG-IP-DSRALED 193 (257)
Q Consensus 118 ~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~--~~Hg-~p-~~r~L~~ 193 (257)
..|++.+++.++++.+.+.++||++-.||++.+.+.+.++|... ..++.|+ .|.....+. +++. .+ .+.+|++
T Consensus 149 ~~~~l~~~~~ea~~~ai~~~kpG~~~~di~~a~~~~~~~~G~~~-~~~~~GH--GIGl~~hE~P~i~~~~~~~~~~~Le~ 225 (286)
T PRK07281 149 EVKNLMDVTKEAMYRGIEQAVVGNRIGDIGAAIQEYAESRGYGV-VRDLVGH--GVGPTMHEEPMVPNYGTAGRGLRLRE 225 (286)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcc-CCCeeee--eCCCccCCCCcCCCcccCCCCCEECC
Confidence 36788899999999999999999999999999999999887643 2222222 222222221 2222 12 3467999
Q ss_pred CCEEEEEeccee
Q 025136 194 GDTINIDVTVYL 205 (257)
Q Consensus 194 GDiV~iDvg~~~ 205 (257)
|.++.|..+.+.
T Consensus 226 GMV~tiEPgiy~ 237 (286)
T PRK07281 226 GMVLTIEPMINT 237 (286)
T ss_pred CCEEEECCeeEc
Confidence 999999988864
No 57
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=96.74 E-value=0.019 Score=50.62 Aligned_cols=101 Identities=16% Similarity=0.139 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCC----CC------------CCCCCCCCCceeeecCCCCc
Q 025136 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGA----YP------------SPLGYGGFPKSVCTSVNECI 181 (257)
Q Consensus 118 ~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga----~p------------s~l~y~gfp~~v~sg~n~~~ 181 (257)
..++..+.+.++++.+.+.++||++-.||.+.+.+.+.+.+. .+ .....+++...+.....+ .
T Consensus 104 ~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~h~~GhgiGl~~~e-~ 182 (243)
T cd01087 104 EQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDVDEIVESGAYAKFFPHGLGHYLGLDVHD-V 182 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcCcccCchHhhhhhhhhhhhcCCCCccccCccccc-C
Confidence 456677888889999999999999999999999988876532 11 000001122223222222 2
Q ss_pred ccC--CC-CCCCCCCCCEEEEEecceeCc-----------EEEeeeeEEEcC
Q 025136 182 CHG--IP-DSRALEDGDTINIDVTVYLNG-----------YHGDTSATFFCG 219 (257)
Q Consensus 182 ~Hg--~p-~~r~L~~GDiV~iDvg~~~~G-----------Y~aD~tRT~~vG 219 (257)
++. .+ ++.+|++|..+.+..+.+..| +-.-+.-|++|.
T Consensus 183 p~~~~~~~~~~~l~~GMv~~iEp~iy~~~~~~~~~~~~~~~g~~ied~v~Vt 234 (243)
T cd01087 183 GGYLRYLRRARPLEPGMVITIEPGIYFIPDLLDVPEYFRGGGIRIEDDVLVT 234 (243)
T ss_pred ccccccCCCCCCCCCCCEEEECCEEEeCCcccccccccceeEEEeeeEEEEc
Confidence 221 23 357899999999999888654 566678889884
No 58
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=96.66 E-value=0.012 Score=50.34 Aligned_cols=97 Identities=25% Similarity=0.352 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCC-CCCCCCCCCCCceeeecCCCCcccCC-C-CCCCCCCCC
Q 025136 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGA-YPSPLGYGGFPKSVCTSVNECICHGI-P-DSRALEDGD 195 (257)
Q Consensus 119 mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga-~ps~l~y~gfp~~v~sg~n~~~~Hg~-p-~~r~L~~GD 195 (257)
.+++.+.+.++++.+.+.++||+|..||.+.+.+.+.++|. .+.+. .+...+.....+..|.-. + ++.+|++|.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~~~~~~~---~~GH~iG~~~~~~~P~i~~~~~~~~l~~gm 180 (207)
T PF00557_consen 104 QRRAYEAAREALEAAIEALRPGVTGSDVYEAVREVLEEYGLEEPYPH---GLGHGIGLEFHEPGPNIARPGDDTVLEPGM 180 (207)
T ss_dssp HHHHHHHHHHHHHHHHHH-STTSBHHHHHHHHHHHHHHTTEGEEBTS---SSEEEESSSSSEEEEEESSTTTSSB--TTB
T ss_pred ccchhhhhHHHHHhHhhhcccccccchhhHHHHHHHHhhcccceeee---cccccccccccccceeeecccccceecCCC
Confidence 77788888889999999999999999999999999999987 22111 122223222211113211 2 568999999
Q ss_pred EEEEEecce-eCcE-EEeeeeEEEc
Q 025136 196 TINIDVTVY-LNGY-HGDTSATFFC 218 (257)
Q Consensus 196 iV~iDvg~~-~~GY-~aD~tRT~~v 218 (257)
++.++.+.. ..|. -.-+.-|++|
T Consensus 181 v~~iep~~~~~~~~~g~~~ed~v~V 205 (207)
T PF00557_consen 181 VFAIEPGLYFIPGWGGVRFEDTVLV 205 (207)
T ss_dssp EEEEEEEEEEETTSEEEEEBEEEEE
T ss_pred ceeEeeeEEccCCCcEEEEEEEEEE
Confidence 999999766 3343 5556666665
No 59
>PLN03158 methionine aminopeptidase; Provisional
Probab=96.53 E-value=0.029 Score=53.70 Aligned_cols=84 Identities=19% Similarity=0.245 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCC--CcccCCCC--CCCCCCC
Q 025136 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE--CICHGIPD--SRALEDG 194 (257)
Q Consensus 119 mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~--~~~Hg~p~--~r~L~~G 194 (257)
.|++.+.+.++++.+.+.++||++-.||.+.+++.+.+.|.... .+|.|+ .|.....+ .++|+..+ ..+|++|
T Consensus 252 ~~~l~e~~~eal~~aI~~vkPGv~~~dI~~~i~~~~~~~G~~~v-~~~~GH--GIG~~~He~P~i~~~~~~~~~~~l~~G 328 (396)
T PLN03158 252 SRQLVKCTYECLEKAIAIVKPGVRYREVGEVINRHATMSGLSVV-KSYCGH--GIGELFHCAPNIPHYARNKAVGVMKAG 328 (396)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCCCcc-CCccCC--ccccccCCCCCCCcccCCCCCCEecCC
Confidence 46677888889999999999999999999999999999886531 223232 22222222 34554332 3689999
Q ss_pred CEEEEEeccee
Q 025136 195 DTINIDVTVYL 205 (257)
Q Consensus 195 DiV~iDvg~~~ 205 (257)
.++.|+-+.+.
T Consensus 329 MVfTIEP~i~~ 339 (396)
T PLN03158 329 QVFTIEPMINA 339 (396)
T ss_pred cEEEECCeecc
Confidence 99999987654
No 60
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=96.28 E-value=0.048 Score=47.77 Aligned_cols=99 Identities=18% Similarity=0.164 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCC-CCCCCCCceeeecCCCCcccCCCCCCCCCCCC
Q 025136 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSP-LGYGGFPKSVCTSVNECICHGIPDSRALEDGD 195 (257)
Q Consensus 117 e~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~-l~y~gfp~~v~sg~n~~~~Hg~p~~r~L~~GD 195 (257)
...+++.+.+.++++++.+.++||++-.||+..+.+.+.+.|..+.. +..+++...+.++++.. .-...|++|.
T Consensus 120 ~~~~~~~~~~~ea~~~~~~~~kpG~~~~dv~~a~~~~~~~~G~~~~~~~~~h~~g~~~~~~~~~~-----~~~~~l~~gm 194 (228)
T cd01089 120 GKKADVIAAAHYALEAALRLLRPGNQNSDITEAIQKVIVDYGCTPVEGVLSHQLKRVVSSGEGKA-----KLVECVKHGL 194 (228)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHcCCEEecCccccCcCceEecCCCCc-----cchhhccCCc
Confidence 46778888889999999999999999999999999999999953210 00011122233332211 0146799999
Q ss_pred EEEEEecceeCc-EEEeeeeEEEcCC
Q 025136 196 TINIDVTVYLNG-YHGDTSATFFCGD 220 (257)
Q Consensus 196 iV~iDvg~~~~G-Y~aD~tRT~~vG~ 220 (257)
++.+....+..| +-.-++-|++|.+
T Consensus 195 vf~~ep~~~~~g~~~~~~~~Tv~vt~ 220 (228)
T cd01089 195 LFPYPVLYEKEGEVVAQFKLTVLLTP 220 (228)
T ss_pred ccccceeEccCCCeEEEEEEEEEEcC
Confidence 999999888765 7788999999953
No 61
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=96.21 E-value=0.066 Score=50.52 Aligned_cols=110 Identities=22% Similarity=0.211 Sum_probs=76.6
Q ss_pred CcCCCCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCccc
Q 025136 104 IVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICH 183 (257)
Q Consensus 104 ~~~~R~VKs~~EIe~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~~~H 183 (257)
+.+.-.+..+.+ ..|+.-.+..++.+++.+.++||+|-.||++.+.+.+.+.|......+ ++...+. .....|
T Consensus 251 iTRT~~~G~~~~--~~~~iy~~V~~aq~aa~~~~rpG~~~~~vd~~ar~~i~~~g~~~~~~h--~~GHgvG---~~l~vh 323 (384)
T COG0006 251 ITRTFPIGKPSD--EQREIYEAVLEAQEAAIAAIRPGVTGGEVDAAARQVLEKAGYGLYFLH--GTGHGVG---FVLDVH 323 (384)
T ss_pred ceeEEecCCCCH--HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHhcCCcccccC--CccccCC---CCcccC
Confidence 344444553322 345777888999999999999999999999999999999766433211 1222222 111223
Q ss_pred CCC------CCCCCCCCCEEEEEeccee-CcEEEeeeeEEEcCC
Q 025136 184 GIP------DSRALEDGDTINIDVTVYL-NGYHGDTSATFFCGD 220 (257)
Q Consensus 184 g~p------~~r~L~~GDiV~iDvg~~~-~GY~aD~tRT~~vG~ 220 (257)
-.| ++.+|++|-++.++.|.++ +++-.-+..+++|.+
T Consensus 324 E~p~~~~~~~~~~L~~GMv~t~Epg~y~~g~~GirIEd~vlVte 367 (384)
T COG0006 324 EHPQYLSPGSDTTLEPGMVFSIEPGIYIPGGGGVRIEDTVLVTE 367 (384)
T ss_pred cCccccCCCCCccccCCcEEEeccccccCCCceEEEEEEEEEcC
Confidence 333 4678999999999999775 568889999999965
No 62
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=96.13 E-value=0.038 Score=50.64 Aligned_cols=97 Identities=23% Similarity=0.276 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeee-cCCC--CcccCC-CCCCCCCCC
Q 025136 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCT-SVNE--CICHGI-PDSRALEDG 194 (257)
Q Consensus 119 mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~s-g~n~--~~~Hg~-p~~r~L~~G 194 (257)
.++..+.+.++++.+.+.++||++-.||.+.+++.+.+.|..+. .++.|+. +.. -.++ .++... .++.+|++|
T Consensus 106 ~~~l~~a~~~A~~aai~~~kPGv~~~dV~~ai~~vi~~~G~~~i-~~~~GHg--ig~~~~h~g~~ip~i~~~~~~~le~G 182 (295)
T TIGR00501 106 YDNLVKAAKDALYTAIKEIRAGVRVGEIGKAIQEVIESYGVKPI-SNLTGHS--MAPYRLHGGKSIPNVKERDTTKLEEG 182 (295)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCeee-cCCCCcc--eecccccCCCccCeecCCCCCEeCCC
Confidence 47778888899999999999999999999999999999998763 3333332 110 0000 112211 235689999
Q ss_pred CEEEEEecce-eCcEEEeeeeEEEc
Q 025136 195 DTINIDVTVY-LNGYHGDTSATFFC 218 (257)
Q Consensus 195 DiV~iDvg~~-~~GY~aD~tRT~~v 218 (257)
+++.|+.... -.|+..|..+|-+.
T Consensus 183 mV~aIEP~~~~G~G~v~~~~~~~iy 207 (295)
T TIGR00501 183 DVVAIEPFATDGVGYVTDGGEVSIY 207 (295)
T ss_pred CEEEEceeEECCcCeEecCCCeEEE
Confidence 9999998655 35888777766554
No 63
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=96.01 E-value=0.089 Score=47.49 Aligned_cols=96 Identities=16% Similarity=0.087 Sum_probs=66.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCC-CC-CCCCCC
Q 025136 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP-DS-RALEDG 194 (257)
Q Consensus 117 e~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~~~Hg~p-~~-r~L~~G 194 (257)
+..++.++.+.++|..+.+.++||.+..||.+.++..+..+|..+. -+|.|..-.-..-..-.++|+.. .. ..|++|
T Consensus 120 ~~~~~L~~~t~eal~~~I~~vkpG~~l~~Ig~aIq~~~~~~G~~vV-r~~~GHgig~~~He~p~ip~y~~~~~~~~l~~G 198 (255)
T COG0024 120 EDAKRLLEATKEALYAGIEAVKPGARLGDIGRAIQEYAESRGFSVV-RNLTGHGIGRELHEEPSIPNYGKDGTGVRLKEG 198 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCEEe-ecccCCccCcccCCCCeeccccCCCCCcccCCC
Confidence 4566778889999999999999999999999999999998887653 23433211111112224566433 22 589999
Q ss_pred CEEEEEecceeC-cEEEeee
Q 025136 195 DTINIDVTVYLN-GYHGDTS 213 (257)
Q Consensus 195 DiV~iDvg~~~~-GY~aD~t 213 (257)
+++.|+--+.-+ ++..+..
T Consensus 199 mv~aIEPmi~~G~~~~~~~~ 218 (255)
T COG0024 199 MVFAIEPMINTGSGEVVEGP 218 (255)
T ss_pred CEEEEeeEEEcCCCceEecC
Confidence 999998766644 4444444
No 64
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=95.70 E-value=0.098 Score=49.96 Aligned_cols=100 Identities=22% Similarity=0.219 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC--CCCceeeecCCCCcccCCC------CCC
Q 025136 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYG--GFPKSVCTSVNECICHGIP------DSR 189 (257)
Q Consensus 118 ~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~--gfp~~v~sg~n~~~~Hg~p------~~r 189 (257)
..+++...+..+++.+.+.++||++-.||...+++.+.++|..+. -++. ++...+--|....++++.+ ++.
T Consensus 139 ~~~~l~~aa~~A~~aai~~vkPG~~~~dI~~ai~~v~~~~G~~~v-~~~~gH~igr~~~~g~~~Ii~~~~~~~~~~~~~~ 217 (389)
T TIGR00495 139 RKADVIAAAHLAAEAALRLVKPGNTNTQVTEAINKVAHSYGCTPV-EGMLSHQLKQHVIDGEKVIISNPSDSQKKDHDTA 217 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHcCCeec-CCceeecccceeccCCCeeeecCCccccCCCCCC
Confidence 455667777888999999999999999999999999999998653 1221 2222221122222334322 234
Q ss_pred CCCCCCEEEEEecce-eCcEEEeee-eEEEc
Q 025136 190 ALEDGDTINIDVTVY-LNGYHGDTS-ATFFC 218 (257)
Q Consensus 190 ~L~~GDiV~iDvg~~-~~GY~aD~t-RT~~v 218 (257)
.+++|++..||..+. -.|+.-+.. ||-+.
T Consensus 218 ~le~gev~aIEp~vs~G~g~v~~~~~~~tiy 248 (389)
T TIGR00495 218 EFEENEVYAVDILVSTGEGKAKDADQRTTIY 248 (389)
T ss_pred EecCCCEEEEeeeecCCCceEEECCCeeEEE
Confidence 799999999999876 356655554 44443
No 65
>PRK10879 proline aminopeptidase P II; Provisional
Probab=95.35 E-value=0.21 Score=48.34 Aligned_cols=100 Identities=18% Similarity=0.212 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHH----HCCCCCCC-------CCCC-CCCcee----eecCCCCcc
Q 025136 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMII----DNGAYPSP-------LGYG-GFPKSV----CTSVNECIC 182 (257)
Q Consensus 119 mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~----~~Ga~ps~-------l~y~-gfp~~v----~sg~n~~~~ 182 (257)
.|++.+++.++.+++.+.++||++-.||...+.+.+. +.|..+.. .++. .|+..+ ....++ .+
T Consensus 284 q~~~y~~vl~a~~aai~~~kpG~~~~~v~~~~~~~~~~~l~~~Gl~~~~~~~~~~~~~~~~~~~Hg~GH~iGldvHd-~~ 362 (438)
T PRK10879 284 QREIYDIVLESLETSLRLYRPGTSIREVTGEVVRIMVSGLVKLGILKGDVDQLIAENAHRPFFMHGLSHWLGLDVHD-VG 362 (438)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHhCCcCCCHHHHHHhccCccccCCCCccccCcCcCc-CC
Confidence 4566778888889999999999999999988876543 33432100 0000 122222 222221 12
Q ss_pred cCCC-CCCCCCCCCEEEEEecceeC----------cEEEeeeeEEEcC
Q 025136 183 HGIP-DSRALEDGDTINIDVTVYLN----------GYHGDTSATFFCG 219 (257)
Q Consensus 183 Hg~p-~~r~L~~GDiV~iDvg~~~~----------GY~aD~tRT~~vG 219 (257)
+..+ ++++|++|.++.|.-|.+.. |+-.-+.-|++|.
T Consensus 363 ~~~~~~~~~L~~GmV~tvEPgiY~~~~~~~~~~~~~~GiRiED~VlVT 410 (438)
T PRK10879 363 VYGQDRSRILEPGMVLTVEPGLYIAPDADVPEQYRGIGIRIEDDIVIT 410 (438)
T ss_pred CcCCCCCCcCCCCCEEEECCEEEECCCcCcccccCccEEEeccEEEEC
Confidence 2222 35789999999999998753 4566788899984
No 66
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=95.08 E-value=0.18 Score=49.36 Aligned_cols=99 Identities=14% Similarity=0.186 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCC----CCCCCCCCCCceeeecCCCCcccC---CC----
Q 025136 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAY----PSPLGYGGFPKSVCTSVNECICHG---IP---- 186 (257)
Q Consensus 118 ~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~----ps~l~y~gfp~~v~sg~n~~~~Hg---~p---- 186 (257)
..+...+.+.+|++.+++.++||++-.||++.+++.+.+.|.. ..++. .+....+-|..-...|+ +|
T Consensus 264 ~~~~L~eAv~eA~~aaI~~~kpGv~~~dI~~AIqevies~G~e~~Gk~f~~k--~I~nltGHgIG~y~iHe~k~iP~v~~ 341 (470)
T PTZ00053 264 KYDPLLQATKDATNTGIKEAGIDVRLSDIGAAIQEVIESYEVEIKGKTYPIK--SIRNLNGHSIGPYIIHGGKSVPIVKG 341 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcccCcccccc--cccCCcccCCCCccccCCCcCCeeCC
Confidence 4567788888999999999999999999999999999999853 10000 00111111111112333 22
Q ss_pred -CCCCCCCCCEEEEEecce-eCcEEEeeeeEEEc
Q 025136 187 -DSRALEDGDTINIDVTVY-LNGYHGDTSATFFC 218 (257)
Q Consensus 187 -~~r~L~~GDiV~iDvg~~-~~GY~aD~tRT~~v 218 (257)
+..+|++|+++.|+..+. -.||..|-.+|-..
T Consensus 342 ~~~~~LeeGmVfaIEPf~stG~G~v~~~~~~siY 375 (470)
T PTZ00053 342 GENTRMEEGELFAIETFASTGRGYVNEDLECSHY 375 (470)
T ss_pred CCCCEecCCCEEEEcceeeCCCCeEecCCCceee
Confidence 346899999999998776 47888886666554
No 67
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=93.45 E-value=1.7 Score=38.11 Aligned_cols=95 Identities=16% Similarity=0.078 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHhhhc-CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeee--cCCCC--cccCCCCCCCCCCCC
Q 025136 121 VSGRLAAQVLEYAGTLV-KPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCT--SVNEC--ICHGIPDSRALEDGD 195 (257)
Q Consensus 121 ~A~~ia~~al~~~~~~i-kpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~s--g~n~~--~~Hg~p~~r~L~~GD 195 (257)
++..++.++...+.+.+ +||++-.+|++.+.+.+.+.|.+- ....|+ .|.. ...+. +.+...++++|++|.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~g~~~--~h~~GH--gIG~~l~~hE~P~i~~~~~~~~~L~~Gm 190 (224)
T cd01085 115 RDYTLVLKGHIALARAKFPKGTTGSQLDALARQPLWKAGLDY--GHGTGH--GVGSFLNVHEGPQSISPAPNNVPLKAGM 190 (224)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCCC--CCCCCC--CCCCCCcCCCCCCcCCcCCCCCCcCCCC
Confidence 34444455556666665 599999999999999998888631 111122 2221 11221 110112357899999
Q ss_pred EEEEEecceeC-cEEEeeeeEEEcC
Q 025136 196 TINIDVTVYLN-GYHGDTSATFFCG 219 (257)
Q Consensus 196 iV~iDvg~~~~-GY~aD~tRT~~vG 219 (257)
++.|+-+.+.. .+-.-+..|++|.
T Consensus 191 vftiEP~iy~~g~~gvried~v~Vt 215 (224)
T cd01085 191 ILSNEPGYYKEGKYGIRIENLVLVV 215 (224)
T ss_pred EEEECCEeEeCCCeEEEeeEEEEEe
Confidence 99999998864 4556688899884
No 68
>PRK13607 proline dipeptidase; Provisional
Probab=93.09 E-value=1.1 Score=43.59 Aligned_cols=88 Identities=18% Similarity=0.187 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHH----HHCCCCCC-------CCCC--CCCCc----eeeecCCCCcc
Q 025136 120 RVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMI----IDNGAYPS-------PLGY--GGFPK----SVCTSVNECIC 182 (257)
Q Consensus 120 R~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i----~~~Ga~ps-------~l~y--~gfp~----~v~sg~n~~~~ 182 (257)
++...++.++.+++.+.++||++-.||+..+++.+ .+.|.... .-++ ..|+. .+...+.+.-.
T Consensus 271 ~~ly~~v~~aq~aai~~ikPG~~~~dv~~aa~~~i~~~L~~~Gl~~g~~~~~~~~~g~~~~~f~HglGH~iGldvHd~~~ 350 (443)
T PRK13607 271 AALIKDVNKEQLALIATMKPGVSYVDLHIQMHQRIAKLLRKFQIVTGLSEEAMVEQGITSPFFPHGLGHPLGLQVHDVAG 350 (443)
T ss_pred HHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhCCCceEecCCCccCccCcccccCCC
Confidence 46678888999999999999999999998887655 44444320 0000 01222 22222222200
Q ss_pred c----------------CCCCCCCCCCCCEEEEEecceeCc
Q 025136 183 H----------------GIPDSRALEDGDTINIDVTVYLNG 207 (257)
Q Consensus 183 H----------------g~p~~r~L~~GDiV~iDvg~~~~G 207 (257)
+ +.-.+++|++|.++.|+-|.++.+
T Consensus 351 ~~~~~~~~~~~~~~~~~~l~~~~~L~~GmV~TvEPGiY~~~ 391 (443)
T PRK13607 351 FMQDDRGTHLAAPEKHPYLRCTRVLEPGMVLTIEPGLYFID 391 (443)
T ss_pred cccccccccccccccccccccCCcCCCCcEEEECCeeeeCh
Confidence 0 011357899999999999998864
No 69
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=86.00 E-value=4.6 Score=37.49 Aligned_cols=82 Identities=23% Similarity=0.308 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC--CceeeecCCCCcccCCCCC--CCCC
Q 025136 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGF--PKSVCTSVNECICHGIPDS--RALE 192 (257)
Q Consensus 117 e~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gf--p~~v~sg~n~~~~Hg~p~~--r~L~ 192 (257)
+..|+..+.+.++|+.+.+.++||++-.||-..+++...++|..-. -.|+|. ...+-+.+ .++|+.-+. .+..
T Consensus 229 e~~k~LVkvT~EcL~kaI~~~kpGv~freiG~iI~kha~~~g~sVV-r~ycGHGig~~FH~~P--nipHya~n~a~GvM~ 305 (369)
T KOG2738|consen 229 EKAKKLVKVTRECLEKAIAIVKPGVSFREIGNIIQKHATKNGYSVV-RSYCGHGIGRVFHCAP--NIPHYAKNKAPGVMK 305 (369)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhcCceee-hhhhccccccccccCC--CchhhcccCCcceee
Confidence 4678888999999999999999999999999999999988876321 113222 11111222 367775432 4578
Q ss_pred CCCEEEEEe
Q 025136 193 DGDTINIDV 201 (257)
Q Consensus 193 ~GDiV~iDv 201 (257)
+|....|+-
T Consensus 306 ~G~tFTIEP 314 (369)
T KOG2738|consen 306 PGQTFTIEP 314 (369)
T ss_pred cCceEEeee
Confidence 898888764
No 70
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=77.66 E-value=9.8 Score=39.44 Aligned_cols=97 Identities=20% Similarity=0.271 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecC------CCCcccCCCCCCCCC
Q 025136 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSV------NECICHGIPDSRALE 192 (257)
Q Consensus 119 mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~------n~~~~Hg~p~~r~L~ 192 (257)
|.++-..--.+.+++.+.++||.+-.+|...+...+.+.+-+-.+ .|.+.+++|. ++.+. ..-++++|+
T Consensus 259 mq~nY~fLl~aqe~il~~lrpG~ki~dVY~~~l~~v~k~~Pel~~----~~~k~lG~~iGlEFREssl~i-naKnd~~lk 333 (960)
T KOG1189|consen 259 MQENYEFLLAAQEEILKLLRPGTKIGDVYEKALDYVEKNKPELVP----NFTKNLGFGIGLEFRESSLVI-NAKNDRVLK 333 (960)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhcCcchhh----hhhhhcccccceeeecccccc-cccchhhhc
Confidence 567777777788888999999999999999999999887643211 2333332222 22221 223568999
Q ss_pred CCCEEEEEecce-------eCcEEEeeeeEEEcCC
Q 025136 193 DGDTINIDVTVY-------LNGYHGDTSATFFCGD 220 (257)
Q Consensus 193 ~GDiV~iDvg~~-------~~GY~aD~tRT~~vG~ 220 (257)
.|++.+|.+|.. -+-|.-=++-|+.||+
T Consensus 334 ~gmvFni~lGf~nl~n~~~~~~yaL~l~DTvlv~e 368 (960)
T KOG1189|consen 334 KGMVFNISLGFSNLTNPESKNSYALLLSDTVLVGE 368 (960)
T ss_pred cCcEEEEeeccccccCcccccchhhhccceeeecC
Confidence 999999999864 2346667889999986
No 71
>cd01666 TGS_DRG_C TGS_DRG_C: DRG (developmentally regulated GTP-binding protein) represents a family of GTP-binding proteins that includes two members, DRG1 and DRG2. DRG1 and DRG2 have a C-terminal TGS domain (named after the ThrRS, GTPase, and SpoT proteins where it occurs) with a predominantly beta-sheet structure. The function of TGS is unknown but its presence in two types of regulatory proteins (the DRG GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=74.79 E-value=11 Score=27.48 Aligned_cols=52 Identities=17% Similarity=0.304 Sum_probs=33.6
Q ss_pred cCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCC-CcccCCCCCCCCCCCCEEEE
Q 025136 137 VKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE-CICHGIPDSRALEDGDTINI 199 (257)
Q Consensus 137 ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~-~~~Hg~p~~r~L~~GDiV~i 199 (257)
++.|.|-.|++..+|..+.+.=.+. +-.|.+. ..+.-.+-+.+|++||+|.|
T Consensus 21 L~~GaTV~D~a~~iH~di~~~f~~A-----------~v~g~s~~~~gq~Vgl~~~L~d~DvVeI 73 (75)
T cd01666 21 LRRGSTVEDVCNKIHKDLVKQFKYA-----------LVWGSSVKHSPQRVGLDHVLEDEDVVQI 73 (75)
T ss_pred ECCCCCHHHHHHHHHHHHHHhCCee-----------EEeccCCcCCCeECCCCCEecCCCEEEE
Confidence 5679999999999998776542221 2122221 12233466789999999986
No 72
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=66.11 E-value=22 Score=36.33 Aligned_cols=82 Identities=21% Similarity=0.256 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecC--C--C-CcccCCCCC
Q 025136 114 KGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSV--N--E-CICHGIPDS 188 (257)
Q Consensus 114 ~EIe~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~--n--~-~~~Hg~p~~ 188 (257)
++-..|..+.. .-+.+...++||.+-.+|...+..++...|-+-.| .|-..|.++. . + ..+...-++
T Consensus 299 e~~~Ny~fl~~----lQk~i~~~~rpG~~~g~iY~~~~~yi~~~~pel~p----nF~~nvG~~igiefR~s~~~~nvkn~ 370 (1001)
T COG5406 299 EQQKNYEFLYM----LQKYILGLVRPGTDSGIIYSEAEKYISSNGPELGP----NFIYNVGLMIGIEFRSSQKPFNVKNG 370 (1001)
T ss_pred HhhhhHHHHHH----HHHHHHhhcCCCCCchhHHHHHHHHHHhcCCccCc----hHhhhhhhhccccccccccceeccCC
Confidence 33345544443 44455668999999999999999999988864321 2333333222 1 1 222333457
Q ss_pred CCCCCCCEEEEEecc
Q 025136 189 RALEDGDTINIDVTV 203 (257)
Q Consensus 189 r~L~~GDiV~iDvg~ 203 (257)
|+||.|++.+|.+|-
T Consensus 371 r~lq~g~~fnis~gf 385 (1001)
T COG5406 371 RVLQAGCIFNISLGF 385 (1001)
T ss_pred ceeccccEEEEeecc
Confidence 999999999999853
No 73
>PF00254 FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomerase; InterPro: IPR001179 Synonym(s): Peptidylprolyl cis-trans isomerase FKBP-type peptidylprolyl isomerases (5.2.1.8 from EC) in vertebrates, are receptors for the two immunosuppressants, FK506 and rapamycin. The drugs inhibit T cell proliferation by arresting two distinct cytoplasmic signal transmission pathways. Peptidylprolyl isomerases accelerate protein folding by catalysing the cis-trans isomerisation of proline imidic peptide bonds in oligopeptides. These proteins are found in a variety of organisms.; GO: 0006457 protein folding; PDB: 1IX5_A 3JXV_A 3JYM_A 1T11_A 1PBK_A 1FD9_A 2VCD_A 3B7X_A 1Q6H_B 1Q6I_B ....
Probab=60.15 E-value=22 Score=26.09 Aligned_cols=51 Identities=29% Similarity=0.291 Sum_probs=38.0
Q ss_pred CCCCCCCCEEEEEeccee-CcEEEeee------eEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCC
Q 025136 188 SRALEDGDTINIDVTVYL-NGYHGDTS------ATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGM 247 (257)
Q Consensus 188 ~r~L~~GDiV~iDvg~~~-~GY~aD~t------RT~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~ 247 (257)
++..++||.|.+++.... +|-.-|.+ .+|.+|.-. ...+++.++..+++|-
T Consensus 2 ~~~~~~gd~V~i~y~~~~~~g~~~~~~~~~~~~~~~~~g~~~---------~i~g~e~al~~m~~Ge 59 (94)
T PF00254_consen 2 PRTPKEGDTVTIHYTGRLEDGKVFDSSYQEGEPFEFRLGSGQ---------VIPGLEEALIGMKVGE 59 (94)
T ss_dssp SSSBSTTSEEEEEEEEEETTSEEEEETTTTTSEEEEETTSSS---------SSHHHHHHHTTSBTTE
T ss_pred CccCCCCCEEEEEEEEEECCCcEEEEeeecCcceeeeeccCc---------cccchhhhcccccCCC
Confidence 356899999999999986 88888887 677777411 2346777777777774
No 74
>PRK01490 tig trigger factor; Provisional
Probab=58.24 E-value=34 Score=32.80 Aligned_cols=57 Identities=19% Similarity=0.353 Sum_probs=40.6
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCCCCCCCCCCEEEEEecceeCcEEEee----eeE
Q 025136 140 GITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDT----SAT 215 (257)
Q Consensus 140 GvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~~~Hg~p~~r~L~~GDiV~iDvg~~~~GY~aD~----tRT 215 (257)
-+|+.+|+..+......++-+. +.+++++.||.|.+|+....+|-.-+- ..+
T Consensus 131 ~vtde~vd~~i~~l~~~~a~~~------------------------~~~~~~~~gD~V~vd~~~~~~g~~~~~~~~~~~~ 186 (435)
T PRK01490 131 EVTDEDVDEELERLRKQFATLV------------------------PVERPAENGDRVTIDFVGSIDGEEFEGGKAEDFS 186 (435)
T ss_pred CCCHHHHHHHHHHHHHhCCccc------------------------cccccCCCCCEEEEEEEEEECCEECcCCCCCceE
Confidence 4789999999888776654321 223678999999999998877754332 356
Q ss_pred EEcCC
Q 025136 216 FFCGD 220 (257)
Q Consensus 216 ~~vG~ 220 (257)
|.+|.
T Consensus 187 ~~lg~ 191 (435)
T PRK01490 187 LELGS 191 (435)
T ss_pred EEEcC
Confidence 77774
No 75
>TIGR00115 tig trigger factor. Trigger factor is a ribosome-associated molecular chaperone and is the first chaperone to interact with nascent polypeptide. Trigger factor can bind at the same time as the signal recognition particle (SRP), but is excluded by the SRP receptor (FtsY). The central domain of trigger factor has peptidyl-prolyl cis/trans isomerase activity. This protein is found in a single copy in virtually every bacterial genome.
Probab=49.08 E-value=57 Score=30.94 Aligned_cols=58 Identities=21% Similarity=0.396 Sum_probs=41.1
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCCCCCCCCCCEEEEEecceeCcEEEeee----eE
Q 025136 140 GITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTS----AT 215 (257)
Q Consensus 140 GvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~~~Hg~p~~r~L~~GDiV~iDvg~~~~GY~aD~t----RT 215 (257)
-+|+.+|+..+......++.+.. ..+++++.||.|.+|+....+|=..+-+ .+
T Consensus 119 ~vtde~vd~~i~~l~~~~a~~~~-----------------------~~~~~~~~gD~V~v~~~~~~dg~~~~~~~~~~~~ 175 (408)
T TIGR00115 119 EVTDEDVDEELEKLREQNATLVP-----------------------VERRAAEKGDRVTIDFEGFIDGEAFEGGKAENFS 175 (408)
T ss_pred CCCHHHHHHHHHHHHHhCCcccc-----------------------ccccccCCCCEEEEEEEEEECCEECcCCCCCCeE
Confidence 47899999999888877654310 1235789999999999887776554433 36
Q ss_pred EEcCC
Q 025136 216 FFCGD 220 (257)
Q Consensus 216 ~~vG~ 220 (257)
|.+|.
T Consensus 176 ~~lg~ 180 (408)
T TIGR00115 176 LELGS 180 (408)
T ss_pred EEECC
Confidence 77774
No 76
>cd04938 TGS_Obg-like TGS_Obg-like: The C-terminal TGS domain of Obg-like GTPases such as those present in DRG (developmentally regulated GTP-binding protein), and GTP-binding proteins Ygr210 and YchF. The TGS domain (named after the ThrRS, GTPase, and SpoT proteins where it occurs) is a small domain of about 50 amino acid residues with a predominantly beta-sheet structure. There is no direct information on the function of the TGS domain, but its presence in two types of regulatory proteins (the GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=45.16 E-value=40 Score=24.57 Aligned_cols=47 Identities=17% Similarity=0.156 Sum_probs=31.0
Q ss_pred cCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCCCCCCCCCCEEEE
Q 025136 137 VKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINI 199 (257)
Q Consensus 137 ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~~~Hg~p~~r~L~~GDiV~i 199 (257)
++.|.|-.|++..+|..+.+.-.+ .+-.| +.....+..|++||+|.|
T Consensus 28 l~~g~tv~d~a~~IH~d~~~~F~~-----------A~v~~-----~~~vg~d~~l~d~DVv~i 74 (76)
T cd04938 28 VKKGTTVGDVARKIHGDLEKGFIE-----------AVGGR-----RRLEGKDVILGKNDILKF 74 (76)
T ss_pred EcCCCCHHHHHHHHhHHHHhccEE-----------EEEcc-----CEEECCCEEecCCCEEEE
Confidence 466999999999999877653221 11122 222345678999999986
No 77
>PF05184 SapB_1: Saposin-like type B, region 1; InterPro: IPR007856 Synonym(s):cerebroside sulphate activator, CSAct Saposin B is a small non-enzymatic glycoprotein required for the breakdown of cerebroside sulphates (sulphatides) in lysosomes. Saposin B contains three intramolecular disulphide bridges, exists as a dimer and is remarkably heat, protease, and pH stable. The crystal structure of human saposin B reveals an unusual shell-like dimer consisting of a monolayer of alpha-helices enclosing a large hydrophobic cavity. Although the secondary structure of saposin B is similar to that of the known monomeric members of the saposin-like superfamily, the helices are repacked into a different tertiary arrangement to form the homodimer. A comparison of the two forms of the saposin B dimer suggests that extraction of target lipids from membranes involves a conformational change that facilitates access to the inner cavity [].; GO: 0006629 lipid metabolic process; PDB: 1N69_C 1QDM_C 4DDJ_A 2DOB_A 1OF9_A 2Z9A_A 1M12_A 2GTG_A 1SN6_A 2QYP_B ....
Probab=38.31 E-value=57 Score=19.85 Aligned_cols=34 Identities=24% Similarity=0.244 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHH
Q 025136 122 SGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMII 155 (257)
Q Consensus 122 A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~ 155 (257)
.|.+...++..+.+.+....|+.+|...+.+.+.
T Consensus 3 ~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~ 36 (39)
T PF05184_consen 3 ECDICKFVVKEIEKLLKNNKTEEEIKKALEKACN 36 (39)
T ss_dssp HHHHHHHHHHHHHHHHHSTCHHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHHcCccHHHHHHHHHHHHh
Confidence 3677888889999999999999999999988763
No 78
>PRK05423 hypothetical protein; Provisional
Probab=35.82 E-value=52 Score=25.42 Aligned_cols=27 Identities=26% Similarity=0.530 Sum_probs=22.5
Q ss_pred HHHHHhhhcCCCCCHHHHHHHHHHHHH
Q 025136 129 VLEYAGTLVKPGITTDEIDKAVHQMII 155 (257)
Q Consensus 129 al~~~~~~ikpGvTe~EI~~~v~~~i~ 155 (257)
.++.+.+.|+||||..||.+++..+-.
T Consensus 44 LLdNL~~YIk~~Ms~e~i~~II~nMr~ 70 (104)
T PRK05423 44 LLDNLSDYIKPGMSIEEIQGIIANMKS 70 (104)
T ss_pred HHHHHHHHcCCCCCHHHHHHHHHHHHh
Confidence 466778889999999999999887654
No 79
>PF04363 DUF496: Protein of unknown function (DUF496); InterPro: IPR007458 Members of this family are uncharacterised proteins.
Probab=35.67 E-value=1.1e+02 Score=23.25 Aligned_cols=37 Identities=16% Similarity=0.332 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHH
Q 025136 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMII 155 (257)
Q Consensus 118 ~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~ 155 (257)
.+|.-.+-.. .|+.+.+.|+|+||..||.+++..+-.
T Consensus 27 KIRDNqKRV~-LLdNL~~YI~~~Ms~edi~~II~nMr~ 63 (95)
T PF04363_consen 27 KIRDNQKRVL-LLDNLSDYIKPDMSIEDIRAIIENMRS 63 (95)
T ss_pred HHhhhHHHHH-HHHHHHHHccCCCCHHHHHHHHHHHHh
Confidence 3444443333 377888999999999999999886643
No 80
>PF03477 ATP-cone: ATP cone domain; InterPro: IPR005144 The ATP-cone is an evolutionarily mobile, ATP-binding regulatory domain which is found in a variety of proteins including ribonucleotide reductases, phosphoglycerate kinases and transcriptional regulators []. In ribonucleotide reductase protein R1 (P28903 from SWISSPROT) from Escherichia coli this domain is located at the N terminus, and is composed mostly of helices []. It forms part of the allosteric effector region and contains the general allosteric activity site in a cleft located at the tip of the N-terminal region []. This site binds either ATP (activating) or dATP (inhibitory), with the base bound in a hydrophobic pocket and the phosphates bound to basic residues. Substrate binding to this site is thought to affect enzyme activity by altering the relative positions of the two subunits of ribonucleotide reductase.; PDB: 2XO4_A 1RLR_A 7R1R_B 5R1R_A 2XO5_B 2XAW_A 2R1R_C 2XAY_B 2X0X_C 2XAZ_A ....
Probab=33.28 E-value=35 Score=24.94 Aligned_cols=35 Identities=26% Similarity=0.331 Sum_probs=22.6
Q ss_pred HHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCC
Q 025136 125 LAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGA 159 (257)
Q Consensus 125 ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga 159 (257)
|+..+...+.+..+.++|+.||...+...+.+.|.
T Consensus 40 i~~~V~~~l~~~~~~~is~~eI~~~v~~~L~~~~~ 74 (90)
T PF03477_consen 40 IASEVENKLYDSGKEEISTEEIQDIVENALMEEGF 74 (90)
T ss_dssp HHHHHHTC-ST----TEEHHHHHHHHHHHHHTSTT
T ss_pred HHHHHHHHHHhccCCCeeHHHHHHHHHHHHHcCCh
Confidence 44444444444444499999999999999997764
No 81
>COG0544 Tig FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) [Posttranslational modification, protein turnover, chaperones]
Probab=32.84 E-value=84 Score=30.69 Aligned_cols=45 Identities=22% Similarity=0.395 Sum_probs=30.5
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCCCCCCCCCCEEEEEecceeCcE
Q 025136 140 GITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGY 208 (257)
Q Consensus 140 GvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~~~Hg~p~~r~L~~GDiV~iDvg~~~~GY 208 (257)
-+|+.||+..+......+..+ .|.++.++.||.|.||+.+..+|=
T Consensus 131 ev~d~dvd~~L~~l~~~~a~~------------------------~~~e~~a~~gD~v~IDf~g~iDg~ 175 (441)
T COG0544 131 EVTDEDVDEELEKLRKRFATL------------------------EPVEGAAENGDRVTIDFEGSVDGE 175 (441)
T ss_pred ccCHHHHHHHHHHHHHhcCcc------------------------cccccccccCCEEEEEEEEEEcCe
Confidence 357788888877665543321 122223899999999999877765
No 82
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=31.77 E-value=2.7e+02 Score=27.28 Aligned_cols=104 Identities=15% Similarity=0.165 Sum_probs=62.5
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHhhhcCC--CCCHHHHHHHH----HHHHHHCCCCCCC-----CCCCCCCceee--ec
Q 025136 110 VHDEKGIECMRVSGRLAAQVLEYAGTLVKP--GITTDEIDKAV----HQMIIDNGAYPSP-----LGYGGFPKSVC--TS 176 (257)
Q Consensus 110 VKs~~EIe~mR~A~~ia~~al~~~~~~ikp--GvTe~EI~~~v----~~~i~~~Ga~ps~-----l~y~gfp~~v~--sg 176 (257)
.-|+.+.+.+...-.+-+++ .+..+| |.|-.+|.... .+.+.+.|...+. ..+.-+|..|. .|
T Consensus 334 kFs~~Qr~LYeavL~vq~ec----ik~c~~~~g~sL~~l~~~s~~Ll~~~Lk~lGI~kt~~ee~~~~~klcPHhVgHyLG 409 (488)
T KOG2414|consen 334 KFSDAQRDLYEAVLQVQEEC----IKYCKPSNGTSLSQLFERSNELLGQELKELGIRKTDREEMIQAEKLCPHHVGHYLG 409 (488)
T ss_pred ccCcHHHHHHHHHHHHHHHH----HHhhcCCCCccHHHHHHHHHHHHHHHHHHhCcccchHHHHHhhhhcCCcccchhcC
Confidence 45777777777666555554 555677 89998886654 4556666754331 11122344432 12
Q ss_pred CCCCcccCC---CCCCCCCCCCEEEEEeccee----------CcEEEeeeeEEEcCC
Q 025136 177 VNECICHGI---PDSRALEDGDTINIDVTVYL----------NGYHGDTSATFFCGD 220 (257)
Q Consensus 177 ~n~~~~Hg~---p~~r~L~~GDiV~iDvg~~~----------~GY~aD~tRT~~vG~ 220 (257)
. ..|-. +.+.+|++|-+++|+-|++. .|.-.-+.--+++|+
T Consensus 410 m---DVHD~p~v~r~~pL~pg~ViTIEPGvYIP~d~d~P~~FrGIGiRIEDDV~i~e 463 (488)
T KOG2414|consen 410 M---DVHDCPTVSRDIPLQPGMVITIEPGVYIPEDDDPPEEFRGIGIRIEDDVAIGE 463 (488)
T ss_pred c---ccccCCCCCCCccCCCCceEEecCceecCccCCCchHhcCceEEeecceEecc
Confidence 2 23333 45789999999999988764 344444555566654
No 83
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=31.27 E-value=78 Score=29.69 Aligned_cols=35 Identities=23% Similarity=0.362 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCHhHHHhhhC
Q 025136 223 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQ 257 (257)
Q Consensus 223 ~e~~~l~~~~~ea~~~ai~~lkPG~~~~dI~~aI~ 257 (257)
.+.++..++-+.+....-+.+|||+++-||.+.|+
T Consensus 86 ~d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iE 120 (397)
T KOG2775|consen 86 QDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIE 120 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHH
Confidence 34566666677778888899999999999988764
No 84
>TIGR03516 ppisom_GldI peptidyl-prolyl isomerase, gliding motility-associated. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldI is a FKBP-type peptidyl-prolyl cis-trans isomerase (pfam00254) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockout of this gene abolishes the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. This family is only found in Bacteroidetes containing the suite of genes proposed to confer the gliding motility phenotype.
Probab=28.82 E-value=1.2e+02 Score=25.77 Aligned_cols=52 Identities=15% Similarity=0.183 Sum_probs=37.2
Q ss_pred CCCCCCCCEEEEEecce-eCcEEEeeee-----EEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCC
Q 025136 188 SRALEDGDTINIDVTVY-LNGYHGDTSA-----TFFCGDVDDEARNLVKVTKDCLHKAISVCAPGME 248 (257)
Q Consensus 188 ~r~L~~GDiV~iDvg~~-~~GY~aD~tR-----T~~vG~~~~e~~~l~~~~~ea~~~ai~~lkPG~~ 248 (257)
....++||.|.+++... .+|-.-|.++ +|.+|. ..+..+++.++..+++|-+
T Consensus 83 g~~p~~gd~V~v~Y~~~~~dG~v~~ss~~~~P~~f~vg~---------~~vi~Gl~e~L~~Mk~Ge~ 140 (177)
T TIGR03516 83 GTTPEFGDLVTFEYDIRALDGDVIYSEEELGPQTYKVDQ---------QDLFSGLRDGLKLMKEGET 140 (177)
T ss_pred CCcCCCCCEEEEEEEEEeCCCCEEEeCCCCCCEEEEeCC---------cchhHHHHHHHcCCCCCCE
Confidence 34568999999998776 5676666554 667764 1245678888888998864
No 85
>cd01669 TGS_Ygr210_C TGS_Ygr210_C: The C-terminal TGS domain of Ygr210 GTP-binding protein which is a member of Obg-like family of GTPases, and present in archaea. Several Obg-like family members possess a C-terminal RNA-binding domain, the TGS domain, which is also present in threonyl-tRNA synthetase and in bacterial guanosine polyphosphatase SpoT. TGS is a small domain of about 50 amino acid residues with a predominantly beta-sheet structure. There is no direct information on the function of the TGS domain, but its presence in two types of regulatory proteins (the GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=27.26 E-value=1.7e+02 Score=21.27 Aligned_cols=48 Identities=23% Similarity=0.338 Sum_probs=31.3
Q ss_pred cCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCCCCCCCCCCEEEE
Q 025136 137 VKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINI 199 (257)
Q Consensus 137 ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~~~Hg~p~~r~L~~GDiV~i 199 (257)
++.|.|-.|.+..+|..+.+. |-..+.. .| ....+-+.+|++||+|.|
T Consensus 27 l~~GaTv~D~A~~IHtdi~~~-----------f~~Ai~~-k~---~~~vg~~~~L~dgDvV~I 74 (76)
T cd01669 27 LPKGSTARDLAYAIHTDIGDG-----------FLHAIDA-RT---GRRVGEDYELKHRDVIKI 74 (76)
T ss_pred ECCCCCHHHHHHHHHHHHHhc-----------ceeeEEe-eC---CEEeCCCcEecCCCEEEE
Confidence 467999999999999877542 1111111 11 233456788999999976
No 86
>PRK15131 mannose-6-phosphate isomerase; Provisional
Probab=25.22 E-value=3.4e+02 Score=26.02 Aligned_cols=46 Identities=20% Similarity=0.276 Sum_probs=32.2
Q ss_pred hhcCcccccCcchhhhhccCCCCceeeeeeecccchhhhhhhhcccC
Q 025136 18 FVGNRFIHSTQPLNQLFGYNSGKNQVSMQLSRTFSGLADLLFNRRNL 64 (257)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 64 (257)
++|..+......|+=||..-.-.+-+|.|+|-. +..++.+|.|...
T Consensus 69 ~LG~~~~~~f~~lP~L~KiL~a~~~LSIQvHPd-~~~A~~~f~~e~~ 114 (389)
T PRK15131 69 LLGEAVAKRFGELPFLFKVLCAAQPLSIQVHPN-KRAAEIGFAKENA 114 (389)
T ss_pred HcCcchhhhcCCCceEeeeeccCCCceeEeCCC-HHHHHHHhhhccc
Confidence 677665443224777778888889999999988 4466667775543
No 87
>KOG2737 consensus Putative metallopeptidase [General function prediction only]
Probab=24.94 E-value=1.7e+02 Score=28.34 Aligned_cols=26 Identities=15% Similarity=0.270 Sum_probs=20.0
Q ss_pred HHHHhhhcCCCCCHHHHHHHHHHHHH
Q 025136 130 LEYAGTLVKPGITTDEIDKAVHQMII 155 (257)
Q Consensus 130 l~~~~~~ikpGvTe~EI~~~v~~~i~ 155 (257)
-.++++.++||+...+++...++.+.
T Consensus 312 ~navm~a~KpGv~W~Dmh~La~kvll 337 (492)
T KOG2737|consen 312 SNAVMEAMKPGVWWVDMHKLAEKVLL 337 (492)
T ss_pred HHHHHHhcCCCCccccHHHHHHHHHH
Confidence 34567888999999998887776654
No 88
>PF10415 FumaraseC_C: Fumarase C C-terminus; InterPro: IPR018951 Fumarase C catalyses the stereo-specific interconversion of fumarate to L-malate as part of the Krebs cycle. The full-length protein forms a tetramer with visible globular shape. FumaraseC_C is the C-terminal 65 residues referred to as domain 3. The core of the molecule consists of a bundle of 20 alpha-helices from the five-helix bundle of domain 2. The projections from the core of the tetramer are generated from domains 1 and 3 of each subunit []. This entry does not appear to be part of either the active site or the activation site but is helical in structure forming a little bundle. ; GO: 0016829 lyase activity, 0006099 tricarboxylic acid cycle; PDB: 3RRP_A 3OCE_D 3OCF_D 3E04_B 3GTD_A 3R6V_F 3R6Q_F 1J3U_B 1FUR_A 1YFE_A ....
Probab=24.76 E-value=94 Score=21.21 Aligned_cols=34 Identities=18% Similarity=0.373 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHHH---hhh-cCCC-CCHHHHHHHHH
Q 025136 118 CMRVSGRLAAQVLEYA---GTL-VKPG-ITTDEIDKAVH 151 (257)
Q Consensus 118 ~mR~A~~ia~~al~~~---~~~-ikpG-vTe~EI~~~v~ 151 (257)
.+.+|++++.+++..- .+. ++-| +|+.|+++.++
T Consensus 10 GYe~aa~iAk~A~~~g~svre~v~~~g~lt~ee~d~ll~ 48 (55)
T PF10415_consen 10 GYEKAAEIAKEALAEGRSVREVVLEEGLLTEEELDELLD 48 (55)
T ss_dssp HHHHHHHHHHHHHHHT--HHHHHHHTTSS-HHHHHHHTS
T ss_pred ccHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHHHHcC
Confidence 5788999999988742 222 2456 89999998764
No 89
>PRK05728 DNA polymerase III subunit chi; Validated
Probab=24.58 E-value=3.8e+02 Score=21.64 Aligned_cols=105 Identities=10% Similarity=0.015 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCC--CcccCCC-CCCCCCCC
Q 025136 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE--CICHGIP-DSRALEDG 194 (257)
Q Consensus 118 ~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~--~~~Hg~p-~~r~L~~G 194 (257)
..+.+|+++++++..-.+.+--.-++ +....+.+.+....... |-+....|... ..|=.+. .+..-..+
T Consensus 14 ~~~~~c~L~~ka~~~g~rv~I~~~d~-~~a~~lD~~LW~~~~~s-------FlPH~~~~~~~~~~~PV~l~~~~~~~~~~ 85 (142)
T PRK05728 14 LEALLCELAEKALRAGWRVLVQCEDE-EQAEALDEALWTFRDES-------FLPHGLAGEGPAAGQPVLLTWPGKRNANH 85 (142)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEcCCH-HHHHHHHHHhcCCCCCc-------CCCCCcCCCCCCCCCCEEEEcCCCCCCCC
Confidence 67889999999887755444333344 56667777776543321 32222222211 0000010 11122345
Q ss_pred CEEEEEecceeCcEEEeeeeEEEc-CCCCHHHHHHHHH
Q 025136 195 DTINIDVTVYLNGYHGDTSATFFC-GDVDDEARNLVKV 231 (257)
Q Consensus 195 DiV~iDvg~~~~GY~aD~tRT~~v-G~~~~e~~~l~~~ 231 (257)
+-|+|.+....-.+.....|.+-+ |+ +++.+..-..
T Consensus 86 ~~~LinL~~~~p~~~~~F~Rvieiv~~-d~~~~~~aR~ 122 (142)
T PRK05728 86 RDLLINLDGAVPAFAAAFERVVDFVGY-DEAAKQAARE 122 (142)
T ss_pred CcEEEECCCCCcchhhcccEEEEEeCC-CHHHHHHHHH
Confidence 566777777778888899999876 54 5555444333
No 90
>PF04355 SmpA_OmlA: SmpA / OmlA family; InterPro: IPR007450 This is a bacterial outer membrane lipoprotein, possibly involved in maintaining the structural integrity of the cell envelope []. The lipid attachment site is a conserved N-terminal cysteine residue sometimes found adjacent to the OmpA domain (IPR006665 from INTERPRO).; GO: 0019867 outer membrane; PDB: 4DM5_C 2PXG_A 2YH9_B 2KXX_A 2KM7_A.
Probab=23.64 E-value=53 Score=23.02 Aligned_cols=19 Identities=26% Similarity=0.469 Sum_probs=14.3
Q ss_pred HHhhhcCCCCCHHHHHHHH
Q 025136 132 YAGTLVKPGITTDEIDKAV 150 (257)
Q Consensus 132 ~~~~~ikpGvTe~EI~~~v 150 (257)
...+.|++|||..||...+
T Consensus 7 ~~~~~i~~GmTk~qV~~lL 25 (71)
T PF04355_consen 7 EQLAQIKPGMTKDQVRALL 25 (71)
T ss_dssp HHHTTT-TTSBHHHHHHHH
T ss_pred HHHHhhcCCCCHHHHHHhc
Confidence 3467789999999998664
No 91
>PRK00464 nrdR transcriptional regulator NrdR; Validated
Probab=22.66 E-value=2.2e+02 Score=23.73 Aligned_cols=39 Identities=8% Similarity=0.035 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCC
Q 025136 123 GRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYP 161 (257)
Q Consensus 123 ~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~p 161 (257)
..+++.+...+......++|..||...+.+.+.+.|...
T Consensus 85 ~~i~~~V~~~l~~~~~~~IsveEIqDiVE~~L~~~~~~a 123 (154)
T PRK00464 85 EAAVSRIERQLRASGEREVPSKEIGELVMEELKKLDEVA 123 (154)
T ss_pred HHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHhcCCEE
Confidence 344555555555544468999999999999999998643
No 92
>PF09506 Salt_tol_Pase: Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase); InterPro: IPR012765 Proteins in this family are glucosylglycerol-phosphate phosphatases, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=22.49 E-value=3.3e+02 Score=25.96 Aligned_cols=128 Identities=16% Similarity=0.278 Sum_probs=90.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC-C-------------------
Q 025136 111 HDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGF-P------------------- 170 (257)
Q Consensus 111 Ks~~EIe~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gf-p------------------- 170 (257)
-|+.||+-+-++-..-...+..-...+-|..++.||...++..+.+.-+.|. +|..++ .
T Consensus 97 Vs~~El~FLa~vP~~m~~~L~~~l~~~~p~l~~~~i~~~~~~sVldt~~SPT-iNlN~lf~~~~~d~~~~~~LQ~~~~~l 175 (381)
T PF09506_consen 97 VSDAELAFLAAVPERMEALLKEFLPAILPELSQEEIEKLIEASVLDTRVSPT-INLNSLFDLVPDDVERQQQLQQMMQEL 175 (381)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhhCcccCHHHHHHHHHHHHhcCCCCCc-cchHHHHHHhcccHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999999999999999999998877764 222110 0
Q ss_pred ------ceeeec-CCCCcccCCCCC----------CCCCCCCEEEEEecce-------------eCcEEEeeeeEEEcC-
Q 025136 171 ------KSVCTS-VNECICHGIPDS----------RALEDGDTINIDVTVY-------------LNGYHGDTSATFFCG- 219 (257)
Q Consensus 171 ------~~v~sg-~n~~~~Hg~p~~----------r~L~~GDiV~iDvg~~-------------~~GY~aD~tRT~~vG- 219 (257)
..-+-| .|+...|+.|+- ++-..||+=..|+--. .+-|+.+-|-++.+|
T Consensus 176 M~~Ll~~A~~~GL~~SFFlH~aPNLGrd~~G~E~lk~A~~~d~GTTDiQfml~GaiKEaGlL~LlN~~i~~rtG~~PlG~ 255 (381)
T PF09506_consen 176 MNELLEKAEAQGLENSFFLHYAPNLGRDANGREILKPATAGDVGTTDIQFMLRGAIKEAGLLVLLNRYIAQRTGKAPLGE 255 (381)
T ss_pred HHHHHHHHHhCCcccceEEEeCCCCCCCCCcceeecccccCCCCchhhhhhhhhhhhhcchhHHHHHHHHhhcCCCCccC
Confidence 001223 356778888851 1234677766665432 345666666667776
Q ss_pred -----CCCHHHHHHHHHHHHHHHHH
Q 025136 220 -----DVDDEARNLVKVTKDCLHKA 239 (257)
Q Consensus 220 -----~~~~e~~~l~~~~~ea~~~a 239 (257)
+.+.....+++.|++.....
T Consensus 256 ~FNvR~AP~~h~~Ll~L~~~~i~~~ 280 (381)
T PF09506_consen 256 DFNVRQAPKSHQELLDLCKENIPPE 280 (381)
T ss_pred ccccccCchhHHHHHHHHHhhCCHH
Confidence 36788888888888766544
No 93
>COG1163 DRG Predicted GTPase [General function prediction only]
Probab=22.17 E-value=2.3e+02 Score=26.93 Aligned_cols=48 Identities=23% Similarity=0.401 Sum_probs=31.9
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccC---CCCCCCCCCCCEEEE
Q 025136 139 PGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHG---IPDSRALEDGDTINI 199 (257)
Q Consensus 139 pGvTe~EI~~~v~~~i~~~Ga~ps~l~y~gfp~~v~sg~n~~~~Hg---~p~~r~L~~GDiV~i 199 (257)
-|-|-.|+++.+|.-+.++ |-.....|.+ +.|. .--+.+|+++|+|.|
T Consensus 312 ~GsTV~Dvc~~IH~~l~~~-----------FryA~VWGkS--vk~~~QrVG~dHvLeD~DIV~I 362 (365)
T COG1163 312 RGSTVGDVCRKIHRDLVEN-----------FRYARVWGKS--VKHPGQRVGLDHVLEDEDIVEI 362 (365)
T ss_pred CCCcHHHHHHHHHHHHHHh-----------cceEEEeccC--CCCCccccCcCcCccCCCeEEE
Confidence 3778899999999998875 2223333432 2332 123678999999986
No 94
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.11 E-value=1.5e+02 Score=27.11 Aligned_cols=41 Identities=17% Similarity=0.139 Sum_probs=33.9
Q ss_pred CCCCCCEEEEEecceeCcEEEeeeeEEEcCCCCHHHHHHHHH
Q 025136 190 ALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKV 231 (257)
Q Consensus 190 ~L~~GDiV~iDvg~~~~GY~aD~tRT~~vG~~~~e~~~l~~~ 231 (257)
-+.+| +|++|-.++++.-.+|++-|=++|..+++..+-|+.
T Consensus 201 ~~~~G-Pv~fDPA~y~GDrE~Dlam~elFggfp~efy~gY~s 241 (286)
T COG3001 201 FGKDG-PVIFDPACYWGDRECDLAMLELFGGFPPEFYDGYQS 241 (286)
T ss_pred ccCCC-CeeeccccccCCcccceehhhhhcCCcHHHHHhhhc
Confidence 45677 999999999999999999999998878777666554
No 95
>TIGR02399 salt_tol_Pase glucosylglycerol 3-phosphatase. Proteins in this family are glucosylglycerol-phosphate phosphatase, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=21.27 E-value=3.5e+02 Score=25.87 Aligned_cols=128 Identities=18% Similarity=0.289 Sum_probs=90.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC-CC-------------------
Q 025136 111 HDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGG-FP------------------- 170 (257)
Q Consensus 111 Ks~~EIe~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~l~y~g-fp------------------- 170 (257)
-|+.||+-+-++-..-...+..-...+-|..++.|+...++..+.+.-+.|. .|..+ |.
T Consensus 103 Vs~~El~FLa~vP~~m~~~L~~~l~~~~p~l~~~~i~~~~~~aVldt~~SPT-iNlN~lf~~v~~d~~~~~~LQ~~~~~l 181 (389)
T TIGR02399 103 VSKEEVDFLAAVPDLMRPSLEQIVKKIFPNLVQEEIQTHASKSVLDTRFSPT-INLNSLFDLVKDDSEIRKILQKSFEDL 181 (389)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhhCcccCHHHHHHHHHHHHhcCCCCCc-cchHHHHHHccchHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999999999999999999998877764 22211 00
Q ss_pred ------ceeeec-CCCCcccCCCCC---------CCCCCCCEEEEEecce-------------eCcEEEeeeeEEEcC--
Q 025136 171 ------KSVCTS-VNECICHGIPDS---------RALEDGDTINIDVTVY-------------LNGYHGDTSATFFCG-- 219 (257)
Q Consensus 171 ------~~v~sg-~n~~~~Hg~p~~---------r~L~~GDiV~iDvg~~-------------~~GY~aD~tRT~~vG-- 219 (257)
..-+-| .|+...|+.|+- ++-..||+=..|+--. .+-|..+-|-++.+|
T Consensus 182 M~~Ll~~A~~~GL~~SFFlH~aPNLG~d~G~E~lk~A~~~d~GTTDiQfml~GaiKEaGlL~LlN~~i~~rtG~~PlG~~ 261 (389)
T TIGR02399 182 MNELMYKAKTQGLENSFFLHIAPNLGSDNGNEIIKLASKGDIGTTDIQFMLKGAVKEAGVLFLLNKFIYDSTGIAPLGRN 261 (389)
T ss_pred HHHHHHHHHhCCcccceEEEeCCcCCCccccEeecccCCCCCCchhhHHHhcchhhhhhHHHHHHHHHHhccCCCCCCCC
Confidence 001223 456778888851 2345688777776443 244666666666666
Q ss_pred ----CCCHHHHHHHHHHHHHHHHH
Q 025136 220 ----DVDDEARNLVKVTKDCLHKA 239 (257)
Q Consensus 220 ----~~~~e~~~l~~~~~ea~~~a 239 (257)
+.+..+..+++.|++.....
T Consensus 262 FNvR~AP~~h~~Ll~L~~~~i~~~ 285 (389)
T TIGR02399 262 FNFRDAPKSHQELLNLCKKHIKPE 285 (389)
T ss_pred CccccCCccHHHHHHHHHhcCCHH
Confidence 46778888888888766544
No 96
>PF13798 PCYCGC: Protein of unknown function with PCYCGC motif
Probab=21.18 E-value=2.2e+02 Score=23.97 Aligned_cols=46 Identities=15% Similarity=0.174 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCC
Q 025136 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSP 163 (257)
Q Consensus 118 ~mR~A~~ia~~al~~~~~~ikpGvTe~EI~~~v~~~i~~~Ga~ps~ 163 (257)
.+-..|.++-.+...+....+.|.|..||...+.+...+-++.|.|
T Consensus 109 ~Hg~~C~vCl~ia~~a~~~~~~Gks~~eIR~~ID~kYk~g~~~pTp 154 (158)
T PF13798_consen 109 DHGTRCGVCLDIAVQAVQMYQEGKSPKEIRQYIDEKYKEGYAKPTP 154 (158)
T ss_pred ccccccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCCCCC
Confidence 3444577777777777888899999999999999998888887753
Done!