Query 025140
Match_columns 257
No_of_seqs 168 out of 1174
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 04:30:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025140.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025140hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3obb_A Probable 3-hydroxyisobu 100.0 1.4E-60 4.9E-65 417.8 27.6 252 5-256 39-297 (300)
2 4gbj_A 6-phosphogluconate dehy 100.0 1.8E-56 6.1E-61 391.6 22.9 251 4-256 40-292 (297)
3 3doj_A AT3G25530, dehydrogenas 100.0 5.8E-48 2E-52 339.7 28.1 251 6-256 58-308 (310)
4 4dll_A 2-hydroxy-3-oxopropiona 100.0 1.6E-47 5.6E-52 338.2 26.5 249 6-256 68-316 (320)
5 3pdu_A 3-hydroxyisobutyrate de 100.0 4.5E-47 1.6E-51 330.3 26.1 249 6-254 38-286 (287)
6 3pef_A 6-phosphogluconate dehy 100.0 5.3E-47 1.8E-51 329.9 24.4 250 6-255 38-287 (287)
7 3g0o_A 3-hydroxyisobutyrate de 100.0 1.5E-46 5.2E-51 329.5 23.5 251 6-256 44-296 (303)
8 2h78_A Hibadh, 3-hydroxyisobut 100.0 2.2E-44 7.6E-49 315.3 29.2 251 6-256 40-297 (302)
9 3l6d_A Putative oxidoreductase 100.0 1.3E-44 4.6E-49 317.7 17.6 245 6-256 46-296 (306)
10 3qha_A Putative oxidoreductase 100.0 1.9E-42 6.6E-47 302.6 25.0 232 6-244 52-294 (296)
11 1vpd_A Tartronate semialdehyde 100.0 3.3E-38 1.1E-42 275.4 25.4 250 6-255 42-291 (299)
12 4ezb_A Uncharacterized conserv 100.0 4.3E-39 1.5E-43 284.0 17.0 236 6-255 69-311 (317)
13 2gf2_A Hibadh, 3-hydroxyisobut 100.0 2.1E-37 7.2E-42 269.9 27.4 252 6-257 37-295 (296)
14 1yb4_A Tartronic semialdehyde 100.0 1.8E-37 6.2E-42 270.0 26.6 251 5-255 38-288 (295)
15 3cky_A 2-hydroxymethyl glutara 100.0 3.7E-37 1.3E-41 268.9 27.2 250 6-255 41-291 (301)
16 3qsg_A NAD-binding phosphogluc 100.0 3.9E-38 1.3E-42 277.3 16.1 226 6-243 64-292 (312)
17 2uyy_A N-PAC protein; long-cha 100.0 1.4E-36 4.8E-41 267.4 24.8 249 6-254 67-315 (316)
18 2cvz_A Dehydrogenase, 3-hydrox 100.0 3.2E-36 1.1E-40 261.3 18.4 245 6-255 37-282 (289)
19 4e21_A 6-phosphogluconate dehy 100.0 2.5E-35 8.6E-40 263.5 19.4 238 6-255 59-349 (358)
20 4gwg_A 6-phosphogluconate dehy 100.0 7.7E-34 2.6E-38 262.0 19.1 227 6-236 41-293 (484)
21 2p4q_A 6-phosphogluconate dehy 100.0 3.8E-32 1.3E-36 252.3 19.9 224 6-233 47-295 (497)
22 4a7p_A UDP-glucose dehydrogena 100.0 1.2E-30 4E-35 239.1 17.6 211 13-236 72-304 (446)
23 2zyd_A 6-phosphogluconate dehy 100.0 2.8E-30 9.6E-35 239.1 18.2 220 6-229 52-295 (480)
24 3g79_A NDP-N-acetyl-D-galactos 100.0 1.4E-29 4.9E-34 233.3 14.4 216 11-235 87-331 (478)
25 1i36_A Conserved hypothetical 100.0 1.9E-29 6.4E-34 216.3 14.1 220 6-246 39-259 (264)
26 3gg2_A Sugar dehydrogenase, UD 100.0 3.1E-29 1.1E-33 230.4 15.6 211 12-236 65-300 (450)
27 2pgd_A 6-phosphogluconate dehy 100.0 3.1E-28 1.1E-32 225.7 19.8 222 11-236 49-291 (482)
28 2iz1_A 6-phosphogluconate dehy 100.0 3.8E-28 1.3E-32 224.7 19.9 220 6-229 42-287 (474)
29 1pgj_A 6PGDH, 6-PGDH, 6-phosph 100.0 2.7E-27 9.3E-32 219.1 19.5 212 13-229 53-285 (478)
30 3pid_A UDP-glucose 6-dehydroge 99.9 1.5E-26 5.2E-31 210.4 19.3 207 12-235 96-318 (432)
31 3ojo_A CAP5O; rossmann fold, c 99.9 2.4E-27 8.4E-32 215.8 10.4 198 23-234 81-296 (431)
32 2o3j_A UDP-glucose 6-dehydroge 99.9 2.7E-26 9.2E-31 212.6 16.0 209 12-234 73-315 (481)
33 2q3e_A UDP-glucose 6-dehydroge 99.9 2.1E-26 7E-31 212.8 14.3 206 11-230 68-305 (467)
34 2y0c_A BCEC, UDP-glucose dehyd 99.9 1.3E-25 4.3E-30 207.8 17.3 209 13-236 72-310 (478)
35 1mv8_A GMD, GDP-mannose 6-dehy 99.9 1.2E-24 4.2E-29 199.3 12.8 211 11-236 61-300 (436)
36 1dlj_A UDP-glucose dehydrogena 99.9 4.6E-23 1.6E-27 187.0 18.4 204 14-236 62-290 (402)
37 3vtf_A UDP-glucose 6-dehydroge 99.8 1.6E-20 5.4E-25 171.0 15.2 211 13-236 85-316 (444)
38 1yqg_A Pyrroline-5-carboxylate 99.8 2.4E-18 8.2E-23 146.8 12.1 204 6-240 38-259 (263)
39 2ahr_A Putative pyrroline carb 99.8 1.4E-17 4.7E-22 141.9 15.9 208 7-238 41-258 (259)
40 3dtt_A NADP oxidoreductase; st 99.8 1.9E-19 6.4E-24 152.8 2.8 134 11-149 76-231 (245)
41 2ew2_A 2-dehydropantoate 2-red 99.7 2.7E-18 9.3E-23 149.7 7.7 214 18-239 64-312 (316)
42 1txg_A Glycerol-3-phosphate de 99.7 1.6E-17 5.6E-22 146.3 9.6 223 14-256 58-334 (335)
43 1z82_A Glycerol-3-phosphate de 99.7 2.7E-18 9.2E-23 151.9 4.5 221 13-253 69-323 (335)
44 3k96_A Glycerol-3-phosphate de 99.7 4.6E-17 1.6E-21 145.2 11.1 214 13-234 87-336 (356)
45 1ks9_A KPA reductase;, 2-dehyd 99.7 1E-17 3.6E-22 144.4 5.6 206 16-237 55-289 (291)
46 2izz_A Pyrroline-5-carboxylate 99.7 8.7E-17 3E-21 141.6 11.1 221 6-245 65-296 (322)
47 1zej_A HBD-9, 3-hydroxyacyl-CO 99.7 2.3E-17 8E-22 143.2 6.2 147 12-182 61-212 (293)
48 1evy_A Glycerol-3-phosphate de 99.7 4E-17 1.4E-21 145.9 5.1 220 12-235 72-331 (366)
49 1yj8_A Glycerol-3-phosphate de 99.6 1.7E-16 5.9E-21 142.4 7.3 214 12-234 90-353 (375)
50 2qyt_A 2-dehydropantoate 2-red 99.6 1E-16 3.5E-21 140.0 5.2 207 18-235 76-313 (317)
51 2rcy_A Pyrroline carboxylate r 99.6 5.4E-15 1.8E-19 125.9 13.7 209 11-240 44-261 (262)
52 1x0v_A GPD-C, GPDH-C, glycerol 99.6 7.9E-16 2.7E-20 136.7 8.0 214 12-234 77-335 (354)
53 3d1l_A Putative NADP oxidoredu 99.6 7.6E-16 2.6E-20 131.6 5.1 163 7-180 49-216 (266)
54 3c24_A Putative oxidoreductase 99.6 4.5E-15 1.6E-19 128.3 8.3 164 6-178 49-232 (286)
55 2dpo_A L-gulonate 3-dehydrogen 99.5 4.6E-14 1.6E-18 123.9 10.9 151 13-182 75-232 (319)
56 1bg6_A N-(1-D-carboxylethyl)-L 99.5 9.1E-14 3.1E-18 123.3 9.5 218 15-239 65-332 (359)
57 3mog_A Probable 3-hydroxybutyr 99.4 6.5E-13 2.2E-17 122.7 7.3 142 14-179 74-225 (483)
58 1jay_A Coenzyme F420H2:NADP+ o 99.3 1.4E-12 4.8E-17 107.4 7.8 128 16-150 55-200 (212)
59 3gt0_A Pyrroline-5-carboxylate 99.3 3.3E-11 1.1E-15 101.7 14.2 166 6-183 43-213 (247)
60 3k6j_A Protein F01G10.3, confi 99.3 1.2E-11 4.1E-16 113.2 10.0 140 14-176 120-268 (460)
61 1f0y_A HCDH, L-3-hydroxyacyl-C 99.3 1.5E-11 5.3E-16 106.8 10.0 144 13-178 88-240 (302)
62 2yjz_A Metalloreductase steap4 98.9 6.2E-13 2.1E-17 109.3 0.0 122 7-141 56-192 (201)
63 2i76_A Hypothetical protein; N 99.2 6.8E-12 2.3E-16 107.8 5.9 150 11-176 45-200 (276)
64 3ggo_A Prephenate dehydrogenas 99.2 8.5E-11 2.9E-15 102.9 12.7 135 6-147 72-221 (314)
65 2g5c_A Prephenate dehydrogenas 99.2 9.4E-11 3.2E-15 100.6 12.4 137 7-150 41-192 (281)
66 2f1k_A Prephenate dehydrogenas 99.2 1.8E-10 6.1E-15 98.7 12.9 157 7-176 38-210 (279)
67 1wdk_A Fatty oxidation complex 99.2 2.7E-11 9.1E-16 117.0 7.4 138 13-174 382-528 (715)
68 2pv7_A T-protein [includes: ch 99.2 3.7E-10 1.3E-14 98.0 13.7 146 18-174 58-205 (298)
69 4e12_A Diketoreductase; oxidor 99.1 4.9E-10 1.7E-14 96.5 13.4 151 13-179 73-227 (283)
70 2wtb_A MFP2, fatty acid multif 99.1 4.2E-11 1.5E-15 115.7 6.5 139 14-177 381-528 (725)
71 3tri_A Pyrroline-5-carboxylate 99.1 4.4E-10 1.5E-14 96.8 10.0 214 6-240 43-269 (280)
72 3b1f_A Putative prephenate deh 99.1 4.7E-10 1.6E-14 96.6 10.2 122 6-131 45-181 (290)
73 3ktd_A Prephenate dehydrogenas 99.0 8.4E-10 2.9E-14 97.6 10.0 134 6-146 45-202 (341)
74 2raf_A Putative dinucleotide-b 99.0 1.2E-10 4.1E-15 96.0 3.7 118 22-146 54-191 (209)
75 1zcj_A Peroxisomal bifunctiona 99.0 9.3E-10 3.2E-14 101.2 9.3 139 14-175 104-250 (463)
76 2dc1_A L-aspartate dehydrogena 98.9 4.7E-11 1.6E-15 100.2 -3.0 126 15-151 39-170 (236)
77 2vns_A Metalloreductase steap3 98.9 2.2E-10 7.7E-15 94.8 0.3 132 7-145 66-208 (215)
78 4huj_A Uncharacterized protein 98.8 5.5E-09 1.9E-13 86.6 5.1 121 11-139 67-206 (220)
79 2i99_A MU-crystallin homolog; 98.7 2.8E-11 9.6E-16 105.9 -11.6 112 6-126 174-296 (312)
80 3dfu_A Uncharacterized protein 98.5 4.9E-07 1.7E-11 75.4 10.4 109 7-133 24-135 (232)
81 3hwr_A 2-dehydropantoate 2-red 98.5 3.3E-06 1.1E-10 73.6 15.6 203 16-237 78-312 (318)
82 3ghy_A Ketopantoate reductase 98.5 2.1E-06 7.2E-11 75.4 14.2 207 16-238 62-322 (335)
83 3i83_A 2-dehydropantoate 2-red 98.5 2.6E-06 8.9E-11 74.3 14.1 204 15-236 61-301 (320)
84 3hn2_A 2-dehydropantoate 2-red 98.5 6.9E-06 2.4E-10 71.3 16.1 209 16-242 61-308 (312)
85 1np3_A Ketol-acid reductoisome 98.3 1.8E-06 6E-11 76.1 9.5 153 8-170 56-223 (338)
86 1y81_A Conserved hypothetical 97.9 8.9E-06 3.1E-10 62.3 3.9 67 11-86 55-121 (138)
87 3gvx_A Glycerate dehydrogenase 97.9 9.4E-06 3.2E-10 69.9 4.2 80 13-94 161-240 (290)
88 4fgw_A Glycerol-3-phosphate de 97.7 0.00024 8.2E-09 63.6 11.3 212 12-234 104-371 (391)
89 3c7a_A Octopine dehydrogenase; 97.7 0.0011 3.7E-08 59.4 15.8 217 15-239 72-364 (404)
90 2p4q_A 6-phosphogluconate dehy 97.7 0.00037 1.3E-08 64.4 12.0 104 133-236 322-440 (497)
91 2zyd_A 6-phosphogluconate dehy 97.6 0.00029 1E-08 64.8 10.9 112 127-238 314-445 (480)
92 2iz1_A 6-phosphogluconate dehy 97.6 0.00038 1.3E-08 63.9 11.3 111 127-237 306-436 (474)
93 3hg7_A D-isomer specific 2-hyd 97.6 3.2E-05 1.1E-09 67.7 3.4 78 14-93 183-260 (324)
94 2duw_A Putative COA-binding pr 97.6 1.8E-05 6.2E-10 61.1 1.5 66 11-85 56-121 (145)
95 3gg9_A D-3-phosphoglycerate de 97.5 3.2E-05 1.1E-09 68.4 2.9 83 8-92 198-280 (352)
96 2b0j_A 5,10-methenyltetrahydro 97.5 0.004 1.4E-07 52.8 15.2 154 9-168 125-280 (358)
97 4dgs_A Dehydrogenase; structur 97.5 9E-05 3.1E-09 65.2 5.5 80 11-92 208-287 (340)
98 4g2n_A D-isomer specific 2-hyd 97.5 4.7E-05 1.6E-09 67.1 3.7 81 11-93 213-293 (345)
99 1mx3_A CTBP1, C-terminal bindi 97.5 3.5E-05 1.2E-09 68.1 2.8 81 10-92 208-288 (347)
100 3jtm_A Formate dehydrogenase, 97.5 3.3E-05 1.1E-09 68.3 2.6 85 6-92 201-285 (351)
101 2pi1_A D-lactate dehydrogenase 97.5 4E-05 1.4E-09 67.3 3.0 91 2-95 172-262 (334)
102 2pgd_A 6-phosphogluconate dehy 97.5 0.00077 2.6E-08 62.0 11.7 105 135-239 316-435 (482)
103 1ygy_A PGDH, D-3-phosphoglycer 97.5 0.00013 4.4E-09 68.0 6.1 115 8-125 180-307 (529)
104 3evt_A Phosphoglycerate dehydr 97.4 4.8E-05 1.6E-09 66.5 1.9 77 15-93 181-257 (324)
105 1qp8_A Formate dehydrogenase; 97.4 0.00012 4.1E-09 63.4 4.4 77 12-90 161-237 (303)
106 2gcg_A Glyoxylate reductase/hy 97.3 0.00024 8.2E-09 62.2 5.8 75 7-84 193-267 (330)
107 3k5p_A D-3-phosphoglycerate de 97.3 9E-05 3.1E-09 66.8 3.0 80 11-92 194-273 (416)
108 2yq5_A D-isomer specific 2-hyd 97.3 0.00013 4.3E-09 64.3 3.8 82 10-94 186-267 (343)
109 3ba1_A HPPR, hydroxyphenylpyru 97.3 0.00013 4.3E-09 64.1 3.6 71 12-84 202-272 (333)
110 2nac_A NAD-dependent formate d 97.3 9.4E-05 3.2E-09 66.3 2.8 76 6-83 228-303 (393)
111 1gdh_A D-glycerate dehydrogena 97.3 0.00012 4E-09 63.9 3.1 74 8-83 185-258 (320)
112 2w2k_A D-mandelate dehydrogena 97.3 9.6E-05 3.3E-09 65.2 2.6 83 8-92 203-285 (348)
113 2j6i_A Formate dehydrogenase; 97.3 0.00013 4.5E-09 64.7 3.4 76 6-83 202-277 (364)
114 2g76_A 3-PGDH, D-3-phosphoglyc 97.3 0.00017 5.8E-09 63.3 3.8 81 8-93 203-285 (335)
115 4e5n_A Thermostable phosphite 97.2 0.00012 3.9E-09 64.3 2.7 81 8-91 184-264 (330)
116 4hy3_A Phosphoglycerate oxidor 97.2 0.00028 9.6E-09 62.6 4.8 81 8-92 214-294 (365)
117 1wwk_A Phosphoglycerate dehydr 97.2 0.00019 6.4E-09 62.3 3.1 73 8-83 180-252 (307)
118 2dbq_A Glyoxylate reductase; D 97.1 0.00043 1.5E-08 60.6 5.3 80 10-92 190-269 (334)
119 1j4a_A D-LDH, D-lactate dehydr 97.1 0.00021 7.1E-09 62.7 3.0 71 12-84 186-256 (333)
120 1sc6_A PGDH, D-3-phosphoglycer 97.1 0.00015 5.1E-09 65.3 1.9 73 12-86 184-258 (404)
121 2ekl_A D-3-phosphoglycerate de 97.1 0.00014 4.9E-09 63.2 1.6 83 8-93 180-262 (313)
122 3oet_A Erythronate-4-phosphate 97.0 0.00023 7.9E-09 63.4 2.2 79 14-94 159-241 (381)
123 1dxy_A D-2-hydroxyisocaproate 97.0 0.00035 1.2E-08 61.2 3.3 75 17-93 189-263 (333)
124 3g17_A Similar to 2-dehydropan 97.0 0.0011 3.6E-08 56.9 6.2 199 18-238 54-285 (294)
125 1xdw_A NAD+-dependent (R)-2-hy 96.9 0.00036 1.2E-08 61.1 2.8 76 16-93 189-264 (331)
126 2cuk_A Glycerate dehydrogenase 96.8 0.00052 1.8E-08 59.6 3.1 65 16-83 184-248 (311)
127 1x7d_A Ornithine cyclodeaminas 96.8 8.9E-05 3E-09 65.5 -2.0 69 13-88 182-250 (350)
128 3pp8_A Glyoxylate/hydroxypyruv 96.7 0.00058 2E-08 59.4 2.3 74 17-92 185-258 (315)
129 2rir_A Dipicolinate synthase, 96.6 0.00044 1.5E-08 59.5 1.1 97 8-123 196-295 (300)
130 2o4c_A Erythronate-4-phosphate 96.6 0.00069 2.4E-08 60.4 2.3 67 16-84 158-228 (380)
131 2d0i_A Dehydrogenase; structur 96.6 0.00059 2E-08 59.8 1.8 78 10-91 186-263 (333)
132 3fr7_A Putative ketol-acid red 96.5 0.011 3.7E-07 54.2 9.1 161 7-173 99-280 (525)
133 2d5c_A AROE, shikimate 5-dehyd 96.2 0.0017 5.6E-08 54.7 2.2 67 12-87 160-228 (263)
134 3ado_A Lambda-crystallin; L-gu 96.1 0.024 8.3E-07 49.1 9.2 148 14-179 76-229 (319)
135 1iuk_A Hypothetical protein TT 96.1 0.0024 8.2E-08 48.7 2.2 67 11-86 56-122 (140)
136 2hk9_A Shikimate dehydrogenase 96.1 0.0019 6.6E-08 54.8 1.8 67 12-87 173-241 (275)
137 4gwg_A 6-phosphogluconate dehy 96.0 0.074 2.5E-06 48.8 12.3 117 134-254 317-448 (484)
138 2d59_A Hypothetical protein PH 95.8 0.0051 1.8E-07 47.0 3.1 66 11-85 63-128 (144)
139 2p2s_A Putative oxidoreductase 95.8 0.022 7.5E-07 49.4 7.3 70 12-88 51-124 (336)
140 3hdj_A Probable ornithine cycl 95.7 0.0023 7.9E-08 55.5 0.9 65 12-86 169-236 (313)
141 3c1a_A Putative oxidoreductase 95.6 0.023 7.9E-07 48.8 6.7 73 13-92 55-131 (315)
142 1tlt_A Putative oxidoreductase 95.5 0.042 1.4E-06 47.2 8.1 73 12-91 52-126 (319)
143 2glx_A 1,5-anhydro-D-fructose 95.2 0.038 1.3E-06 47.6 6.8 76 12-94 46-126 (332)
144 3ego_A Probable 2-dehydropanto 95.1 0.044 1.5E-06 47.0 6.8 195 21-238 63-294 (307)
145 2ho3_A Oxidoreductase, GFO/IDH 95.0 0.073 2.5E-06 45.8 8.0 75 12-93 47-125 (325)
146 1omo_A Alanine dehydrogenase; 95.0 0.0038 1.3E-07 54.3 -0.2 65 13-88 177-241 (322)
147 3e9m_A Oxidoreductase, GFO/IDH 94.9 0.058 2E-06 46.6 7.0 74 12-92 51-129 (330)
148 3cea_A MYO-inositol 2-dehydrog 94.7 0.058 2E-06 46.7 6.6 74 12-92 55-134 (346)
149 3uuw_A Putative oxidoreductase 94.7 0.075 2.6E-06 45.3 7.2 71 11-88 52-124 (308)
150 4hkt_A Inositol 2-dehydrogenas 94.6 0.071 2.4E-06 46.0 6.9 72 11-90 48-123 (331)
151 3db2_A Putative NADPH-dependen 94.6 0.078 2.7E-06 46.2 7.2 73 11-90 50-126 (354)
152 3euw_A MYO-inositol dehydrogen 94.4 0.08 2.7E-06 45.9 6.8 73 11-89 49-124 (344)
153 3evn_A Oxidoreductase, GFO/IDH 94.4 0.16 5.5E-06 43.7 8.7 79 7-92 45-129 (329)
154 3e18_A Oxidoreductase; dehydro 94.4 0.12 4E-06 45.3 7.8 73 9-88 47-123 (359)
155 2z2v_A Hypothetical protein PH 94.3 0.0089 3E-07 52.9 0.4 62 17-86 69-130 (365)
156 3ezy_A Dehydrogenase; structur 94.2 0.098 3.4E-06 45.4 6.9 72 12-90 48-124 (344)
157 3kux_A Putative oxidoreductase 94.1 0.1 3.4E-06 45.5 6.7 67 12-85 52-122 (352)
158 3q2i_A Dehydrogenase; rossmann 94.1 0.098 3.3E-06 45.6 6.6 73 11-90 59-135 (354)
159 3fhl_A Putative oxidoreductase 94.0 0.14 4.8E-06 44.8 7.7 70 12-88 50-123 (362)
160 2egg_A AROE, shikimate 5-dehyd 94.0 0.013 4.3E-07 50.4 0.7 65 17-87 196-262 (297)
161 3rc1_A Sugar 3-ketoreductase; 94.0 0.11 3.9E-06 45.2 6.9 75 8-89 69-148 (350)
162 3i23_A Oxidoreductase, GFO/IDH 94.0 0.11 3.7E-06 45.3 6.7 70 11-87 49-122 (349)
163 1lc0_A Biliverdin reductase A; 93.9 0.1 3.5E-06 44.4 6.4 74 12-93 51-128 (294)
164 3e82_A Putative oxidoreductase 93.9 0.12 4.1E-06 45.3 6.9 70 12-88 52-125 (364)
165 1ydw_A AX110P-like protein; st 93.9 0.14 4.7E-06 44.8 7.3 70 13-89 57-130 (362)
166 3f4l_A Putative oxidoreductase 93.8 0.084 2.9E-06 45.9 5.7 68 12-86 50-121 (345)
167 1h6d_A Precursor form of gluco 93.7 0.076 2.6E-06 47.9 5.5 71 15-92 138-212 (433)
168 3d4o_A Dipicolinate synthase s 93.7 0.031 1.1E-06 47.7 2.7 74 8-91 194-269 (293)
169 3mz0_A Inositol 2-dehydrogenas 93.5 0.095 3.2E-06 45.5 5.5 65 13-84 52-120 (344)
170 3m2t_A Probable dehydrogenase; 93.4 0.14 4.7E-06 44.8 6.5 72 7-85 46-123 (359)
171 1xea_A Oxidoreductase, GFO/IDH 93.3 0.14 4.9E-06 43.9 6.4 73 12-91 48-124 (323)
172 3gdo_A Uncharacterized oxidore 93.2 0.2 6.7E-06 43.8 7.1 69 12-87 50-122 (358)
173 3moi_A Probable dehydrogenase; 92.9 0.16 5.5E-06 44.9 6.2 75 11-92 48-126 (387)
174 3don_A Shikimate dehydrogenase 92.9 0.047 1.6E-06 46.4 2.5 65 16-87 166-232 (277)
175 3kb6_A D-lactate dehydrogenase 92.5 0.065 2.2E-06 46.7 3.0 88 3-93 173-260 (334)
176 3ec7_A Putative dehydrogenase; 92.5 0.2 6.9E-06 43.7 6.1 65 13-84 73-141 (357)
177 3ohs_X Trans-1,2-dihydrobenzen 92.2 0.35 1.2E-05 41.6 7.3 72 12-90 50-126 (334)
178 2nvw_A Galactose/lactose metab 91.8 0.22 7.7E-06 45.4 5.8 69 14-89 95-174 (479)
179 3btv_A Galactose/lactose metab 91.7 0.2 6.8E-06 45.1 5.2 69 15-87 77-152 (438)
180 3v5n_A Oxidoreductase; structu 91.4 0.58 2E-05 41.7 8.0 70 12-88 87-168 (417)
181 3zwc_A Peroxisomal bifunctiona 91.3 1 3.6E-05 43.4 10.1 143 14-176 383-530 (742)
182 2ixa_A Alpha-N-acetylgalactosa 90.9 0.38 1.3E-05 43.3 6.3 67 13-86 73-147 (444)
183 2yv1_A Succinyl-COA ligase [AD 90.6 0.59 2E-05 39.8 6.9 69 11-85 54-125 (294)
184 2g0t_A Conserved hypothetical 90.5 1.2 4.1E-05 38.9 8.9 118 11-131 74-206 (350)
185 3mwd_B ATP-citrate synthase; A 90.4 0.6 2.1E-05 40.6 6.8 69 11-85 62-135 (334)
186 2nu8_A Succinyl-COA ligase [AD 90.4 0.64 2.2E-05 39.4 6.9 69 11-85 48-119 (288)
187 1oi7_A Succinyl-COA synthetase 90.3 0.63 2.2E-05 39.5 6.8 69 11-85 48-119 (288)
188 4dio_A NAD(P) transhydrogenase 89.9 0.077 2.6E-06 47.5 0.8 46 18-64 268-313 (405)
189 3dty_A Oxidoreductase, GFO/IDH 89.9 0.74 2.5E-05 40.7 7.2 71 11-88 61-143 (398)
190 3upl_A Oxidoreductase; rossman 89.7 0.47 1.6E-05 42.9 5.7 67 13-85 93-162 (446)
191 3u3x_A Oxidoreductase; structu 89.0 0.83 2.8E-05 39.8 6.8 68 13-87 74-145 (361)
192 4ew6_A D-galactose-1-dehydroge 88.9 0.67 2.3E-05 39.9 6.0 73 11-90 64-141 (330)
193 3bio_A Oxidoreductase, GFO/IDH 88.4 0.49 1.7E-05 40.4 4.7 61 16-84 57-120 (304)
194 1zh8_A Oxidoreductase; TM0312, 88.1 1.3 4.3E-05 38.3 7.2 72 12-90 66-142 (340)
195 3p2y_A Alanine dehydrogenase/p 88.0 0.15 5E-06 45.3 1.2 46 18-64 258-303 (381)
196 3c85_A Putative glutathione-re 87.8 0.45 1.5E-05 36.9 3.9 58 23-89 103-160 (183)
197 4gmf_A Yersiniabactin biosynth 87.6 0.21 7.2E-06 44.1 2.0 73 11-90 52-128 (372)
198 2yv2_A Succinyl-COA synthetase 87.4 1.4 4.7E-05 37.5 6.9 69 11-85 54-126 (297)
199 3oa2_A WBPB; oxidoreductase, s 87.4 1.2 4.2E-05 38.0 6.7 70 12-88 49-131 (318)
200 3o9z_A Lipopolysaccaride biosy 86.5 1.4 4.8E-05 37.5 6.6 69 12-87 49-129 (312)
201 1f06_A MESO-diaminopimelate D- 86.5 0.86 2.9E-05 39.1 5.2 64 11-81 44-110 (320)
202 1lss_A TRK system potassium up 86.4 1.5 5.1E-05 31.8 5.9 57 23-89 67-123 (140)
203 1v8b_A Adenosylhomocysteinase; 85.7 0.27 9.2E-06 44.9 1.6 61 8-75 296-357 (479)
204 1l7d_A Nicotinamide nucleotide 85.7 1.4 4.8E-05 38.8 6.3 74 6-86 48-121 (384)
205 2fp4_A Succinyl-COA ligase [GD 85.5 1.4 4.7E-05 37.7 5.9 69 11-85 55-127 (305)
206 3ulk_A Ketol-acid reductoisome 84.1 0.67 2.3E-05 41.9 3.4 53 6-63 80-132 (491)
207 3ff4_A Uncharacterized protein 84.1 0.58 2E-05 34.4 2.5 66 11-86 45-110 (122)
208 3oqb_A Oxidoreductase; structu 82.9 2.6 8.8E-05 36.8 6.7 72 11-89 66-142 (383)
209 4fb5_A Probable oxidoreductase 81.6 2.7 9.3E-05 36.3 6.4 69 12-87 78-151 (393)
210 1vkn_A N-acetyl-gamma-glutamyl 81.3 1.8 6.3E-05 37.8 5.0 93 18-123 71-174 (351)
211 3ip3_A Oxidoreductase, putativ 81.1 3.1 0.0001 35.6 6.4 64 13-83 53-120 (337)
212 4gqa_A NAD binding oxidoreduct 81.0 3.4 0.00012 36.4 6.9 71 12-89 80-155 (412)
213 3d64_A Adenosylhomocysteinase; 80.8 0.41 1.4E-05 43.9 0.7 62 9-78 317-379 (494)
214 3oj0_A Glutr, glutamyl-tRNA re 80.5 2.7 9.2E-05 31.1 5.2 42 15-64 70-111 (144)
215 3phh_A Shikimate dehydrogenase 79.8 0.21 7.1E-06 42.2 -1.5 59 25-87 172-230 (269)
216 1pgj_A 6PGDH, 6-PGDH, 6-phosph 79.8 8.8 0.0003 34.7 9.3 105 135-239 323-441 (478)
217 3o8q_A Shikimate 5-dehydrogena 79.6 0.3 1E-05 41.4 -0.6 63 18-86 180-243 (281)
218 4had_A Probable oxidoreductase 79.0 2.5 8.5E-05 36.3 5.2 70 12-88 70-144 (350)
219 4a26_A Putative C-1-tetrahydro 78.2 1.3 4.3E-05 37.9 2.9 51 7-66 184-242 (300)
220 3h9u_A Adenosylhomocysteinase; 78.2 1 3.5E-05 40.6 2.4 53 9-68 251-303 (436)
221 3ngx_A Bifunctional protein fo 77.2 1.1 3.8E-05 37.8 2.2 51 7-66 169-225 (276)
222 1npy_A Hypothetical shikimate 76.9 0.32 1.1E-05 41.0 -1.2 62 23-90 173-238 (271)
223 4h3v_A Oxidoreductase domain p 75.9 6.2 0.00021 34.0 6.9 69 12-87 59-135 (390)
224 3abi_A Putative uncharacterize 74.8 0.91 3.1E-05 39.6 1.1 70 17-94 69-139 (365)
225 2vhw_A Alanine dehydrogenase; 73.4 4.4 0.00015 35.5 5.3 69 6-86 48-116 (377)
226 3pff_A ATP-citrate synthase; p 72.4 6.5 0.00022 38.3 6.5 71 11-85 548-621 (829)
227 3ing_A Homoserine dehydrogenas 71.9 1.6 5.3E-05 37.8 1.9 119 18-165 73-200 (325)
228 3dr3_A N-acetyl-gamma-glutamyl 71.6 1.5 5E-05 38.1 1.7 41 18-65 68-108 (337)
229 2oz8_A MLL7089 protein; struct 70.8 25 0.00085 30.7 9.6 101 26-130 161-273 (389)
230 3pzr_A Aspartate-semialdehyde 70.4 7.4 0.00025 34.1 5.9 37 21-64 60-98 (370)
231 1j5p_A Aspartate dehydrogenase 69.9 4.7 0.00016 33.5 4.3 66 12-84 47-115 (253)
232 1b7g_O Protein (glyceraldehyde 69.9 4 0.00014 35.4 4.0 51 8-65 60-110 (340)
233 1hyh_A L-hicdh, L-2-hydroxyiso 69.7 5.1 0.00017 33.9 4.7 53 16-74 61-132 (309)
234 2axq_A Saccharopine dehydrogen 69.7 4.5 0.00016 36.6 4.6 63 18-88 81-143 (467)
235 3do5_A HOM, homoserine dehydro 69.0 3.6 0.00012 35.5 3.5 119 18-165 71-199 (327)
236 3mtj_A Homoserine dehydrogenas 67.4 3 0.0001 37.6 2.8 77 11-93 62-142 (444)
237 3u62_A Shikimate dehydrogenase 67.2 2.6 8.9E-05 34.9 2.2 89 14-114 155-246 (253)
238 3uw3_A Aspartate-semialdehyde 67.0 9.6 0.00033 33.5 5.9 37 21-64 64-102 (377)
239 1guz_A Malate dehydrogenase; o 66.9 7.5 0.00026 33.0 5.1 56 15-76 60-130 (310)
240 3stp_A Galactonate dehydratase 65.9 28 0.00097 30.7 8.9 71 56-126 231-307 (412)
241 1rvk_A Isomerase/lactonizing e 63.9 25 0.00085 30.5 8.1 72 56-127 201-279 (382)
242 4dio_A NAD(P) transhydrogenase 63.9 7 0.00024 34.7 4.5 72 5-90 72-143 (405)
243 1a4i_A Methylenetetrahydrofola 63.4 3.9 0.00013 34.9 2.6 51 8-67 185-241 (301)
244 3jyo_A Quinate/shikimate dehyd 63.1 4 0.00014 34.3 2.7 65 17-86 186-250 (283)
245 3l07_A Bifunctional protein fo 62.6 4.1 0.00014 34.4 2.6 51 7-66 180-236 (285)
246 4a5o_A Bifunctional protein fo 62.3 4.6 0.00016 34.1 2.8 51 7-66 180-236 (286)
247 1x13_A NAD(P) transhydrogenase 61.5 1.8 6.2E-05 38.4 0.2 44 18-64 248-293 (401)
248 3ce6_A Adenosylhomocysteinase; 61.3 4.2 0.00014 37.2 2.6 53 8-67 313-365 (494)
249 2eez_A Alanine dehydrogenase; 60.9 3.5 0.00012 36.0 1.9 67 6-86 48-114 (369)
250 4dpl_A Malonyl-COA/succinyl-CO 60.8 3.7 0.00013 35.9 2.1 37 22-65 76-112 (359)
251 4dpk_A Malonyl-COA/succinyl-CO 60.8 3.7 0.00013 35.9 2.1 37 22-65 76-112 (359)
252 3p2o_A Bifunctional protein fo 60.2 4.3 0.00015 34.3 2.3 51 7-66 179-235 (285)
253 1p77_A Shikimate 5-dehydrogena 59.5 3.1 0.00011 34.6 1.3 57 25-87 180-238 (272)
254 3hsk_A Aspartate-semialdehyde 59.5 3.6 0.00012 36.3 1.8 37 22-65 90-126 (381)
255 3gfs_A FMN-dependent NADPH-azo 59.5 28 0.00095 26.3 6.8 94 21-123 59-164 (174)
256 1y6j_A L-lactate dehydrogenase 59.4 10 0.00035 32.3 4.6 56 18-78 67-137 (318)
257 2pgw_A Muconate cycloisomerase 59.1 52 0.0018 28.5 9.3 99 26-127 163-268 (384)
258 1ebf_A Homoserine dehydrogenas 59.0 7 0.00024 34.1 3.5 49 111-165 151-205 (358)
259 4f3y_A DHPR, dihydrodipicolina 58.8 10 0.00034 31.7 4.4 58 12-76 60-118 (272)
260 2f46_A Hypothetical protein; s 58.6 53 0.0018 24.3 8.6 59 57-129 44-109 (156)
261 3ugv_A Enolase; enzyme functio 58.4 34 0.0012 29.9 8.0 71 56-126 220-296 (390)
262 2csu_A 457AA long hypothetical 57.4 6.3 0.00021 35.6 3.0 69 11-85 50-125 (457)
263 1b0a_A Protein (fold bifunctio 56.9 4.4 0.00015 34.3 1.8 51 8-67 179-235 (288)
264 3c8m_A Homoserine dehydrogenas 56.7 12 0.00043 32.0 4.7 121 18-165 78-204 (331)
265 1rtt_A Conserved hypothetical 56.7 31 0.0011 26.4 6.8 99 20-126 67-182 (193)
266 1ur5_A Malate dehydrogenase; o 55.5 21 0.00071 30.2 5.9 56 16-77 62-132 (309)
267 1ys4_A Aspartate-semialdehyde 55.4 4.4 0.00015 35.2 1.6 41 18-65 75-116 (354)
268 2c2x_A Methylenetetrahydrofola 55.0 6.2 0.00021 33.3 2.4 42 16-66 194-235 (281)
269 3eez_A Putative mandelate race 54.9 80 0.0027 27.3 9.8 78 48-127 181-264 (378)
270 3d0o_A L-LDH 1, L-lactate dehy 54.6 17 0.00059 30.8 5.2 59 14-77 63-136 (317)
271 1mdl_A Mandelate racemase; iso 54.6 23 0.00079 30.4 6.2 74 56-129 190-269 (359)
272 1pzg_A LDH, lactate dehydrogen 54.3 14 0.00048 31.6 4.6 57 15-76 68-144 (331)
273 1ff9_A Saccharopine reductase; 54.2 10 0.00036 34.0 3.9 64 18-89 61-124 (450)
274 2og9_A Mandelate racemase/muco 54.2 38 0.0013 29.6 7.5 68 56-123 208-281 (393)
275 4hs4_A Chromate reductase; tri 54.1 61 0.0021 25.2 8.2 96 19-122 67-180 (199)
276 2ovl_A Putative racemase; stru 54.1 21 0.00072 30.9 5.8 74 56-129 192-271 (371)
277 2qde_A Mandelate racemase/muco 53.7 50 0.0017 28.8 8.3 71 56-126 190-266 (397)
278 4b4u_A Bifunctional protein fo 53.5 7.2 0.00025 33.2 2.6 49 8-65 199-253 (303)
279 3jva_A Dipeptide epimerase; en 53.0 35 0.0012 29.3 7.1 73 56-128 184-262 (354)
280 2nqt_A N-acetyl-gamma-glutamyl 53.0 11 0.00036 32.9 3.6 106 21-138 76-195 (352)
281 4dwd_A Mandelate racemase/muco 52.9 35 0.0012 29.9 7.2 72 56-128 192-269 (393)
282 3ic5_A Putative saccharopine d 52.6 11 0.00038 25.9 3.2 17 70-86 82-98 (118)
283 3tcs_A Racemase, putative; PSI 51.9 61 0.0021 28.3 8.5 71 56-126 200-276 (388)
284 1t4b_A Aspartate-semialdehyde 51.8 37 0.0013 29.5 7.0 40 18-65 59-100 (367)
285 2ox4_A Putative mandelate race 51.3 67 0.0023 27.9 8.8 71 56-126 210-286 (403)
286 1tkk_A Similar to chloromucona 51.3 81 0.0028 26.9 9.2 72 56-127 186-265 (366)
287 3n58_A Adenosylhomocysteinase; 51.1 4.4 0.00015 36.6 0.9 51 10-67 288-338 (464)
288 5nul_A Flavodoxin; electron tr 51.1 51 0.0017 23.5 6.8 84 22-123 42-136 (138)
289 4dye_A Isomerase; enolase fami 51.0 45 0.0015 29.2 7.5 76 50-126 207-287 (398)
290 3ozy_A Putative mandelate race 50.9 31 0.0011 30.1 6.4 73 56-128 196-275 (389)
291 2qq6_A Mandelate racemase/muco 50.7 1.1E+02 0.0037 26.7 10.1 70 56-125 211-286 (410)
292 2pp0_A L-talarate/galactarate 50.6 44 0.0015 29.2 7.4 68 56-123 221-294 (398)
293 3rcy_A Mandelate racemase/muco 49.8 51 0.0018 29.3 7.8 66 57-122 205-276 (433)
294 3ijp_A DHPR, dihydrodipicolina 49.4 25 0.00085 29.6 5.3 62 10-78 73-135 (288)
295 2hzg_A Mandelate racemase/muco 49.2 60 0.0021 28.3 8.1 74 56-129 194-276 (401)
296 3toy_A Mandelate racemase/muco 48.7 44 0.0015 29.1 7.1 73 56-128 214-292 (383)
297 2ewd_A Lactate dehydrogenase,; 48.7 11 0.00038 31.9 3.1 45 15-64 63-122 (317)
298 1xyg_A Putative N-acetyl-gamma 48.6 13 0.00045 32.3 3.6 97 20-124 77-181 (359)
299 3pwk_A Aspartate-semialdehyde 48.6 6.4 0.00022 34.5 1.6 37 22-65 61-97 (366)
300 2vhw_A Alanine dehydrogenase; 48.4 9.3 0.00032 33.4 2.6 46 17-64 223-269 (377)
301 3i4k_A Muconate lactonizing en 48.4 61 0.0021 28.1 7.9 80 49-128 187-273 (383)
302 1t2d_A LDH-P, L-lactate dehydr 47.9 24 0.00083 30.0 5.1 54 16-75 64-137 (322)
303 2obn_A Hypothetical protein; s 47.8 28 0.00097 30.1 5.5 114 11-131 58-189 (349)
304 2rdx_A Mandelate racemase/muco 47.7 70 0.0024 27.6 8.2 98 26-128 161-265 (379)
305 1mld_A Malate dehydrogenase; o 47.7 28 0.00096 29.4 5.5 53 17-74 60-127 (314)
306 4dxk_A Mandelate racemase / mu 47.1 44 0.0015 29.3 6.8 72 57-128 212-289 (400)
307 1nu5_A Chloromuconate cycloiso 47.0 1.3E+02 0.0043 25.7 9.8 70 57-126 190-265 (370)
308 1a5z_A L-lactate dehydrogenase 47.0 16 0.00056 30.9 3.9 52 20-76 62-128 (319)
309 3dmy_A Protein FDRA; predicted 46.5 28 0.00096 31.6 5.5 67 13-85 21-90 (480)
310 2hjr_A Malate dehydrogenase; m 46.5 26 0.00088 29.9 5.1 55 14-74 72-141 (328)
311 3pwz_A Shikimate dehydrogenase 46.1 7.8 0.00027 32.3 1.6 57 24-86 180-237 (272)
312 1edz_A 5,10-methylenetetrahydr 45.8 5.6 0.00019 34.2 0.7 41 17-65 237-277 (320)
313 1l7d_A Nicotinamide nucleotide 45.8 5.7 0.0002 34.8 0.8 44 19-64 251-295 (384)
314 1tzz_A Hypothetical protein L1 45.6 35 0.0012 29.7 5.9 67 56-122 211-283 (392)
315 3i6e_A Muconate cycloisomerase 45.3 76 0.0026 27.5 8.1 77 51-127 188-270 (385)
316 1cf2_P Protein (glyceraldehyde 45.2 13 0.00044 32.0 2.9 50 11-67 64-113 (337)
317 3sbf_A Mandelate racemase / mu 45.2 42 0.0014 29.4 6.4 67 56-122 202-274 (401)
318 3tz6_A Aspartate-semialdehyde 45.1 9.8 0.00033 33.0 2.1 37 22-65 60-96 (344)
319 3mkc_A Racemase; metabolic pro 45.1 32 0.0011 30.1 5.6 70 57-126 207-283 (394)
320 1nyt_A Shikimate 5-dehydrogena 44.7 13 0.00045 30.7 2.9 55 24-85 179-235 (271)
321 3ik4_A Mandelate racemase/muco 44.6 84 0.0029 27.0 8.2 76 53-128 185-268 (365)
322 1dih_A Dihydrodipicolinate red 44.6 15 0.00051 30.6 3.2 31 12-43 59-89 (273)
323 1leh_A Leucine dehydrogenase; 44.5 3.4 0.00011 36.3 -0.9 64 12-85 217-281 (364)
324 2zad_A Muconate cycloisomerase 44.4 1.4E+02 0.0049 25.1 10.0 97 56-166 183-287 (345)
325 3sjn_A Mandelate racemase/muco 44.4 44 0.0015 28.9 6.4 72 56-127 194-272 (374)
326 3rr1_A GALD, putative D-galact 44.2 38 0.0013 29.8 5.9 71 57-127 180-256 (405)
327 2g1u_A Hypothetical protein TM 44.1 26 0.00089 25.8 4.3 21 23-43 82-102 (155)
328 2eez_A Alanine dehydrogenase; 44.1 7.9 0.00027 33.6 1.4 46 17-64 221-267 (369)
329 3go2_A Putative L-alanine-DL-g 43.9 1.1E+02 0.0037 26.8 8.9 72 56-127 214-289 (409)
330 3fwz_A Inner membrane protein 43.8 30 0.001 25.0 4.5 57 23-88 69-125 (140)
331 3szu_A ISPH, 4-hydroxy-3-methy 43.8 11 0.00038 32.4 2.2 68 6-82 59-126 (328)
332 3r0u_A Enzyme of enolase super 43.4 69 0.0024 27.8 7.5 71 56-126 187-265 (379)
333 1vl6_A Malate oxidoreductase; 43.4 9 0.00031 33.8 1.7 52 16-74 254-305 (388)
334 2qrj_A Saccharopine dehydrogen 43.3 34 0.0011 30.2 5.3 72 5-89 69-144 (394)
335 2ep5_A 350AA long hypothetical 43.0 11 0.00036 32.7 2.0 40 18-65 71-110 (350)
336 3r4e_A Mandelate racemase/muco 42.7 39 0.0013 29.8 5.8 71 57-127 222-298 (418)
337 3qy9_A DHPR, dihydrodipicolina 42.6 58 0.002 26.5 6.4 56 11-76 41-97 (243)
338 2v6b_A L-LDH, L-lactate dehydr 42.4 26 0.00089 29.4 4.4 46 20-70 62-122 (304)
339 3t6c_A RSPA, putative MAND fam 42.2 45 0.0016 29.7 6.2 67 56-122 241-313 (440)
340 2nql_A AGR_PAT_674P, isomerase 42.1 68 0.0023 27.8 7.2 66 56-121 209-280 (388)
341 1smk_A Malate dehydrogenase, g 42.1 30 0.001 29.4 4.8 19 18-36 69-87 (326)
342 3tj4_A Mandelate racemase; eno 41.9 64 0.0022 27.9 7.0 73 56-128 198-276 (372)
343 1obo_A Flavodoxin; electron tr 41.9 1E+02 0.0035 22.7 8.4 63 22-87 43-119 (169)
344 2ps2_A Putative mandelate race 41.7 1.6E+02 0.0056 25.0 9.7 70 56-127 191-266 (371)
345 3tnl_A Shikimate dehydrogenase 41.5 33 0.0011 29.2 4.9 63 19-86 220-284 (315)
346 3mqt_A Mandelate racemase/muco 40.8 44 0.0015 29.2 5.8 69 57-125 202-277 (394)
347 3q45_A Mandelate racemase/muco 40.6 46 0.0016 28.7 5.8 73 56-128 185-263 (368)
348 2czc_A Glyceraldehyde-3-phosph 40.5 18 0.0006 31.0 3.1 30 12-41 66-95 (334)
349 1nvt_A Shikimate 5'-dehydrogen 39.9 12 0.00041 31.2 1.9 62 20-86 188-251 (287)
350 2qgy_A Enolase from the enviro 39.8 43 0.0015 29.1 5.6 72 55-126 194-271 (391)
351 4b1v_M Phosphatase and actin r 39.4 10 0.00035 20.3 0.8 13 1-13 14-26 (32)
352 3ddm_A Putative mandelate race 39.3 94 0.0032 27.0 7.7 71 56-126 200-277 (392)
353 3tji_A Mandelate racemase/muco 39.2 40 0.0014 29.8 5.3 67 56-122 223-295 (422)
354 3rmj_A 2-isopropylmalate synth 38.7 84 0.0029 27.3 7.2 101 64-166 30-143 (370)
355 2o56_A Putative mandelate race 38.6 55 0.0019 28.5 6.1 72 56-127 216-293 (407)
356 4a7p_A UDP-glucose dehydrogena 38.6 36 0.0012 30.5 4.9 63 12-84 375-437 (446)
357 2rir_A Dipicolinate synthase, 38.4 16 0.00054 30.6 2.4 70 8-89 43-127 (300)
358 3gvp_A Adenosylhomocysteinase 38.3 11 0.00037 33.8 1.4 52 10-68 261-312 (435)
359 2ozp_A N-acetyl-gamma-glutamyl 38.0 19 0.00067 31.0 3.0 95 23-124 66-167 (345)
360 4e4u_A Mandalate racemase/muco 37.7 56 0.0019 28.8 6.0 66 57-122 203-274 (412)
361 3my9_A Muconate cycloisomerase 37.5 1.2E+02 0.004 26.1 8.0 71 57-127 193-269 (377)
362 3hgj_A Chromate reductase; TIM 37.5 1.5E+02 0.0052 25.2 8.6 42 48-89 211-260 (349)
363 3dg3_A Muconate cycloisomerase 37.3 69 0.0023 27.6 6.4 73 56-128 186-264 (367)
364 3p04_A Uncharacterized BCR; SE 36.7 71 0.0024 21.7 5.0 47 26-78 5-51 (87)
365 2fz5_A Flavodoxin; alpha/beta 36.5 73 0.0025 22.3 5.6 62 21-86 42-113 (137)
366 3g79_A NDP-N-acetyl-D-galactos 36.4 21 0.00073 32.3 3.1 62 15-85 404-466 (478)
367 3v3w_A Starvation sensing prot 36.3 40 0.0014 29.8 4.8 71 56-126 227-303 (424)
368 3ro6_B Putative chloromuconate 36.3 84 0.0029 26.9 6.8 66 56-121 185-256 (356)
369 2gdq_A YITF; mandelate racemas 35.9 37 0.0013 29.5 4.5 72 56-127 185-263 (382)
370 3vcn_A Mannonate dehydratase; 35.3 40 0.0014 29.9 4.6 71 56-126 228-304 (425)
371 2qip_A Protein of unknown func 35.3 1.1E+02 0.0038 22.8 6.7 65 68-133 61-143 (165)
372 2q3e_A UDP-glucose 6-dehydroge 34.9 16 0.00055 32.8 2.0 67 12-85 395-461 (467)
373 3f6r_A Flavodoxin; FMN binding 34.8 97 0.0033 22.2 6.2 61 25-88 49-123 (148)
374 3ewb_X 2-isopropylmalate synth 34.8 1.6E+02 0.0054 24.5 8.1 102 63-165 22-135 (293)
375 3dip_A Enolase; structural gen 34.7 42 0.0014 29.6 4.7 72 56-127 214-292 (410)
376 3ndc_A Precorrin-4 C(11)-methy 34.4 1.9E+02 0.0064 23.5 9.3 77 19-122 23-100 (264)
377 2gl5_A Putative dehydratase pr 34.2 86 0.003 27.3 6.7 72 56-127 219-296 (410)
378 3dgb_A Muconate cycloisomerase 33.8 1.7E+02 0.0058 25.2 8.4 72 56-127 195-272 (382)
379 2chr_A Chloromuconate cycloiso 33.4 1.2E+02 0.0042 25.8 7.4 66 56-121 189-260 (370)
380 2lfc_A Fumarate reductase, fla 33.2 43 0.0015 25.1 3.9 33 213-246 99-131 (160)
381 2o3j_A UDP-glucose 6-dehydroge 33.1 25 0.00085 31.7 2.9 64 14-86 401-464 (481)
382 1p9l_A Dihydrodipicolinate red 33.0 1.7E+02 0.0059 23.6 7.9 30 56-87 46-75 (245)
383 1ydg_A Trp repressor binding p 32.9 1.2E+02 0.0042 23.2 6.8 69 19-90 72-155 (211)
384 3t4e_A Quinate/shikimate dehyd 32.8 56 0.0019 27.7 5.0 62 20-87 215-279 (312)
385 3k1y_A Oxidoreductase; structu 32.7 21 0.0007 28.0 2.1 66 19-87 79-154 (191)
386 2okt_A OSB synthetase, O-succi 32.6 1.4E+02 0.0048 25.2 7.6 76 51-127 162-241 (342)
387 4e5t_A Mandelate racemase / mu 32.6 50 0.0017 28.9 4.8 67 57-123 210-282 (404)
388 2zc8_A N-acylamino acid racema 32.5 1.5E+02 0.0052 25.2 7.9 72 55-127 182-259 (369)
389 3fcp_A L-Ala-D/L-Glu epimerase 32.4 91 0.0031 27.0 6.4 70 56-125 194-269 (381)
390 3dfz_A SIRC, precorrin-2 dehyd 32.4 1.6E+02 0.0053 23.5 7.4 112 9-121 36-163 (223)
391 2r00_A Aspartate-semialdehyde 32.2 21 0.00072 30.6 2.2 36 23-65 63-98 (336)
392 3p2y_A Alanine dehydrogenase/p 32.2 52 0.0018 28.8 4.7 68 5-89 69-136 (381)
393 4e4f_A Mannonate dehydratase; 31.8 64 0.0022 28.6 5.4 72 56-127 229-306 (426)
394 3u9i_A Mandelate racemase/muco 31.6 1.1E+02 0.0037 26.7 6.8 76 53-128 215-298 (393)
395 2ejw_A HDH, homoserine dehydro 31.4 13 0.00046 31.9 0.8 60 14-80 56-116 (332)
396 3u7r_A NADPH-dependent FMN red 31.4 1.8E+02 0.0061 22.4 8.5 70 19-88 61-141 (190)
397 2xvc_A ESCRT-III, SSO0910; cel 31.3 36 0.0012 21.3 2.5 22 155-176 27-48 (59)
398 1x13_A NAD(P) transhydrogenase 31.0 53 0.0018 28.8 4.7 68 6-87 55-122 (401)
399 1pjc_A Protein (L-alanine dehy 30.7 46 0.0016 28.6 4.2 69 6-87 48-116 (361)
400 3abi_A Putative uncharacterize 30.6 1E+02 0.0035 26.3 6.4 33 54-88 76-108 (365)
401 3v7e_A Ribosome-associated pro 30.2 43 0.0015 22.2 3.1 34 55-88 27-60 (82)
402 1f4p_A Flavodoxin; electron tr 30.1 1.5E+02 0.005 21.1 6.5 61 23-86 45-120 (147)
403 2y0c_A BCEC, UDP-glucose dehyd 30.1 1E+02 0.0034 27.7 6.4 64 13-86 393-456 (478)
404 4ina_A Saccharopine dehydrogen 29.8 20 0.00068 31.5 1.7 19 18-36 67-87 (405)
405 3s5s_A Mandelate racemase/muco 29.6 1.4E+02 0.0049 25.8 7.3 75 54-128 187-269 (389)
406 1chr_A Chloromuconate cycloiso 29.4 69 0.0024 27.6 5.1 72 56-127 189-266 (370)
407 3svl_A Protein YIEF; E. coli C 29.3 1.9E+02 0.0066 22.1 8.1 98 19-124 66-181 (193)
408 1lld_A L-lactate dehydrogenase 29.0 67 0.0023 26.6 4.9 53 20-77 70-137 (319)
409 1rr7_A Middle operon regulator 28.9 91 0.0031 22.6 4.9 61 113-176 55-115 (129)
410 4hpn_A Putative uncharacterize 28.7 1.6E+02 0.0054 25.2 7.3 73 55-127 188-266 (378)
411 3dnf_A ISPH, LYTB, 4-hydroxy-3 28.6 22 0.00074 30.1 1.6 11 77-87 84-94 (297)
412 2qdd_A Mandelate racemase/muco 28.4 2.2E+02 0.0075 24.3 8.2 70 56-128 191-265 (378)
413 2a5l_A Trp repressor binding p 28.3 92 0.0031 23.6 5.3 68 20-90 66-148 (200)
414 3fni_A Putative diflavin flavo 28.0 45 0.0015 24.9 3.3 85 23-123 54-144 (159)
415 3fv9_G Mandelate racemase/muco 27.9 2.7E+02 0.0092 24.0 8.7 77 49-127 187-270 (386)
416 1s6y_A 6-phospho-beta-glucosid 27.9 51 0.0017 29.5 4.0 21 16-36 74-94 (450)
417 3hm2_A Precorrin-6Y C5,15-meth 27.8 42 0.0014 24.7 3.1 61 24-90 93-153 (178)
418 3fvw_A Putative NAD(P)H-depend 27.7 1.3E+02 0.0045 22.9 6.1 98 19-122 61-178 (192)
419 4b79_A PA4098, probable short- 27.5 2.4E+02 0.0082 22.7 7.9 71 53-124 8-78 (242)
420 3hly_A Flavodoxin-like domain; 27.4 1.2E+02 0.0042 22.4 5.7 90 18-123 41-139 (161)
421 1ez4_A Lactate dehydrogenase; 26.9 82 0.0028 26.6 5.0 23 14-36 61-83 (318)
422 2poz_A Putative dehydratase; o 26.8 63 0.0022 28.0 4.4 67 56-122 200-272 (392)
423 4a35_A Mitochondrial enolase s 26.3 2.1E+02 0.0072 25.3 7.8 72 56-127 246-326 (441)
424 3tla_A MCCF; serine protease, 26.2 1.3E+02 0.0046 26.0 6.3 81 51-141 38-129 (371)
425 2vzf_A NADH-dependent FMN redu 26.0 71 0.0024 24.5 4.2 96 21-124 65-173 (197)
426 3l5l_A Xenobiotic reductase A; 25.9 1.9E+02 0.0065 24.8 7.3 43 47-89 216-267 (363)
427 1id1_A Putative potassium chan 25.9 95 0.0033 22.5 4.7 18 23-40 69-86 (153)
428 1p9l_A Dihydrodipicolinate red 25.9 1.5E+02 0.0051 24.0 6.2 61 17-84 36-99 (245)
429 1pjc_A Protein (L-alanine dehy 25.5 51 0.0017 28.3 3.5 18 19-36 224-241 (361)
430 2q62_A ARSH; alpha/beta, flavo 25.5 2.1E+02 0.007 23.1 7.1 64 19-85 92-169 (247)
431 4h1z_A Enolase Q92ZS5; dehydra 25.3 2.9E+02 0.01 24.0 8.6 71 56-126 233-309 (412)
432 3fi9_A Malate dehydrogenase; s 25.2 99 0.0034 26.5 5.3 24 13-36 64-87 (343)
433 3d6n_B Aspartate carbamoyltran 25.1 38 0.0013 28.5 2.5 24 8-31 188-211 (291)
434 2hmt_A YUAA protein; RCK, KTN, 25.1 60 0.0021 22.8 3.4 14 23-36 68-81 (144)
435 1czn_A Flavodoxin; FMN binding 24.9 1.6E+02 0.0055 21.5 6.0 63 22-87 43-119 (169)
436 2a9f_A Putative malic enzyme ( 24.7 13 0.00044 32.9 -0.5 51 16-73 249-299 (398)
437 3bjs_A Mandelate racemase/muco 24.6 63 0.0022 28.5 4.0 66 56-121 230-302 (428)
438 3sr3_A Microcin immunity prote 24.5 1.8E+02 0.0061 24.8 6.7 81 51-141 8-99 (336)
439 3mwc_A Mandelate racemase/muco 24.4 2.7E+02 0.0092 24.1 8.1 71 56-127 206-282 (400)
440 2yv3_A Aspartate-semialdehyde 24.2 26 0.0009 29.9 1.4 34 25-65 61-94 (331)
441 2p8b_A Mandelate racemase/muco 23.9 1.2E+02 0.0042 25.8 5.7 72 56-127 186-264 (369)
442 2qrj_A Saccharopine dehydrogen 23.8 13 0.00045 32.8 -0.6 42 21-64 259-301 (394)
443 2ki0_A DS119; beta-alpha-beta, 23.5 79 0.0027 16.9 2.6 27 102-128 7-33 (36)
444 4hnl_A Mandelate racemase/muco 23.4 1.1E+02 0.0039 26.7 5.5 69 55-123 221-295 (421)
445 2zki_A 199AA long hypothetical 23.4 2.4E+02 0.0081 21.1 7.0 69 20-91 65-148 (199)
446 4e8g_A Enolase, mandelate race 23.2 2.6E+02 0.0089 24.2 7.7 72 55-127 210-285 (391)
447 1r0m_A N-acylamino acid racema 23.0 1.3E+02 0.0043 25.8 5.6 74 55-129 189-268 (375)
448 3llv_A Exopolyphosphatase-rela 22.8 94 0.0032 22.0 4.1 17 24-40 69-85 (141)
449 2zqz_A L-LDH, L-lactate dehydr 22.6 96 0.0033 26.3 4.6 23 14-36 65-87 (326)
450 2ark_A Flavodoxin; FMN, struct 22.6 1.9E+02 0.0064 21.7 6.1 65 20-87 47-125 (188)
451 3gd6_A Muconate cycloisomerase 22.5 1.7E+02 0.006 25.2 6.4 35 57-91 188-226 (391)
452 2p3z_A L-rhamnonate dehydratas 21.7 3.5E+02 0.012 23.6 8.3 36 56-91 223-259 (415)
453 1sjd_A N-acylamino acid racema 21.6 1E+02 0.0034 26.4 4.7 71 57-128 185-261 (368)
454 2hjs_A USG-1 protein homolog; 21.6 45 0.0015 28.6 2.3 37 23-66 66-102 (340)
455 1eye_A DHPS 1, dihydropteroate 21.3 2.3E+02 0.008 23.4 6.7 52 65-123 26-77 (280)
456 1ldn_A L-lactate dehydrogenase 21.2 84 0.0029 26.4 4.0 20 17-36 66-85 (316)
457 3cwq_A Para family chromosome 21.2 71 0.0024 24.8 3.3 76 17-92 82-160 (209)
458 4dzz_A Plasmid partitioning pr 21.0 93 0.0032 23.5 3.9 75 19-94 91-171 (206)
459 1oju_A MDH, malate dehydrogena 20.8 1.6E+02 0.0054 24.5 5.6 20 16-36 61-80 (294)
460 2hxt_A L-fuconate dehydratase; 20.6 96 0.0033 27.4 4.4 73 56-128 243-322 (441)
461 4e16_A Precorrin-4 C(11)-methy 20.5 3.3E+02 0.011 21.7 8.6 77 19-122 24-101 (253)
No 1
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=100.00 E-value=1.4e-60 Score=417.77 Aligned_cols=252 Identities=24% Similarity=0.393 Sum_probs=243.6
Q ss_pred chhhhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcE
Q 025140 5 NNAFYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASF 84 (257)
Q Consensus 5 ~~~~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ 84 (257)
.++|++.|++.++|++|++++||+||+|||+++++++|+++.+++++.+.+|++|||+||++|+++++++++++++|++|
T Consensus 39 ~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~ 118 (300)
T 3obb_A 39 VDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAM 118 (300)
T ss_dssp HHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEE
T ss_pred HHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEE
Confidence 47799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCChHHhhcCceEEEecCChhHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 025140 85 LEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSMMATFSEGLLHSEKVG 164 (257)
Q Consensus 85 vdapV~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~G 164 (257)
+||||+|+|.+|++|+|++|+||++++|++++|+|+.|+++++|+|+.|+|+.+|++||++.++++++++|++.++++.|
T Consensus 119 lDaPVsGg~~~A~~G~L~imvGG~~~~~~~~~p~l~~~g~~i~~~G~~G~g~~~Kl~~N~l~~~~~~a~aEa~~la~~~G 198 (300)
T 3obb_A 119 LDAPVSGGTAGAAAGTLTFMVGGDAEALEKARPLFEAMGRNIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANG 198 (300)
T ss_dssp EECCEESCHHHHHHTCEEEEEESCHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EecCCCCCHHHHHhCCEEEEEeCCHHHHHHHHHHHHHhCCCEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcCCCchhhhcccc-------ccccCCCCCCCchhhHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Q 025140 165 LDPNVLVEVVSQGAISAPMYSLKGP-------SMIESLYPTAFPLKHQQKDLRLALGLAESVSQSTPIAAAANELYKVAK 237 (257)
Q Consensus 165 ld~~~~~~~l~~~~~~s~~~~~~~~-------~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~~a~ 237 (257)
+|++.++++++.+++.||.++.+.| .+..++|.++|+++++.||++++++++++.|+|+|+++.+.++|+++.
T Consensus 199 ld~~~~~~vl~~~~~~s~~~~~~~p~~~~~~~~~~~~~~~~~f~~~l~~KDl~l~~~~A~~~g~~~p~~~~a~~~~~~a~ 278 (300)
T 3obb_A 199 LEAKVLAEIMRRSSGGNWALEVYNPWPGVMENAPASRDYSGGFMAQLMAKDLGLAQEAAQASASSTPMGSLALSLYRLLL 278 (300)
T ss_dssp CCHHHHHHHHHTSTTCCHHHHHCCCSTTTSTTSGGGGTTCSSSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCcccchHHHhhccccchhhhccccccCCccchHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHH
Confidence 9999999999999999999998876 356788999999999999999999999999999999999999999999
Q ss_pred HCCCCCcchHHHHHHHHhC
Q 025140 238 SHGLSDEDFSAVIEALKAK 256 (257)
Q Consensus 238 ~~g~g~~d~~a~~~~~~~~ 256 (257)
+.|+|++|+++|+++|++.
T Consensus 279 ~~G~g~~D~sal~~~~e~~ 297 (300)
T 3obb_A 279 KQGYAERDFSVVQKLFDPT 297 (300)
T ss_dssp HTTCTTSBGGGGHHHHCTT
T ss_pred hCCCCCcCHHHHHHHHHHh
Confidence 9999999999999999864
No 2
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=100.00 E-value=1.8e-56 Score=391.57 Aligned_cols=251 Identities=18% Similarity=0.281 Sum_probs=240.8
Q ss_pred cchhhhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCc
Q 025140 4 PNNAFYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGAS 83 (257)
Q Consensus 4 ~~~~~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~ 83 (257)
..++|++.|++.++|+.|++++||+||+|||++.++++++.+ .+...+.++++|||+||++|+++++++++++++|++
T Consensus 40 ~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~--~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~ 117 (297)
T 4gbj_A 40 KAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSM--ELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAH 117 (297)
T ss_dssp --CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCH--HHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHH--HHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCc
Confidence 357799999999999999999999999999999999998863 367788899999999999999999999999999999
Q ss_pred EEEecCCCChHHhhcCceEEEecCChhHHHHHHHHHHHhcCCceecCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025140 84 FLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGD-VGNGAAMKLVVNMIMGSMMATFSEGLLHSEK 162 (257)
Q Consensus 84 ~vdapV~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~~G~-~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~ 162 (257)
|+|+||+|+|..++.|++++|+||++++|++++|+|+.++++++|+|+ +|+|+.+|+++|++.++++++++|++.++++
T Consensus 118 ~ldapVsGg~~~a~~g~l~im~gG~~~~~~~~~~~l~~~g~~i~~~g~~~G~g~~~Kl~~N~~~~~~~~~~aEa~~la~~ 197 (297)
T 4gbj_A 118 YVGAPIFARPEAVRAKVGNICLSGNAGAKERIKPIVENFVKGVFDFGDDPGAANVIKLAGNFMIACSLEMMGEAFTMAEK 197 (297)
T ss_dssp EEECCEECCHHHHHHTCCEEEEEECHHHHHHHHHHHHTTCSEEEECCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eecCCcCCCccccccccceeecccchhHHHHHHHHHHHhhCCeEEecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999986 8999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHhhcCCCchhhhccccccccCCCCC-CCchhhHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHCCC
Q 025140 163 VGLDPNVLVEVVSQGAISAPMYSLKGPSMIESLYPT-AFPLKHQQKDLRLALGLAESVSQSTPIAAAANELYKVAKSHGL 241 (257)
Q Consensus 163 ~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~-~f~~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g~ 241 (257)
.|+|++.++++++.+++.||+++.+.|++..++|.| +|+++++.||++++++++++.|+|+|+++.+.++|+++.+.|+
T Consensus 198 ~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~p~~f~~~l~~KDl~l~~~~A~~~g~~~p~~~~~~~~~~~a~~~G~ 277 (297)
T 4gbj_A 198 NGISRQSIYEMLTSTLFAAPIFQNYGKLVASNTYEPVAFRFPLGLKDINLTLQTASDVNAPMPFADIIRNRFISGLAKGR 277 (297)
T ss_dssp TTCCHHHHHHHHHTTTTCSHHHHHHHHHHHHTCCCSCSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTC
T ss_pred cCCCHHHHHHHHHhhcccCchhhccCccccCCCCCCccchhHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999999999986 8999999999999999999999999999999999999999999
Q ss_pred CCcchHHHHHHHHhC
Q 025140 242 SDEDFSAVIEALKAK 256 (257)
Q Consensus 242 g~~d~~a~~~~~~~~ 256 (257)
|++||++++++++++
T Consensus 278 g~~D~sal~~~~~~~ 292 (297)
T 4gbj_A 278 ENLDWGALALGASDD 292 (297)
T ss_dssp TTSBGGGGGHHHHHH
T ss_pred CCCCHHHHHHHHHHH
Confidence 999999999999864
No 3
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=100.00 E-value=5.8e-48 Score=339.66 Aligned_cols=251 Identities=55% Similarity=0.851 Sum_probs=243.7
Q ss_pred hhhhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEE
Q 025140 6 NAFYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 6 ~~~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~v 85 (257)
+.+.+.|++.++|+.|++++||+||+|||++.++++++++++++.+.+.+|++|||+||++|.+++++++.+.++|++|+
T Consensus 58 ~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~v 137 (310)
T 3doj_A 58 DELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFV 137 (310)
T ss_dssp HHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 56788899999999999999999999999999999999988889888999999999999999999999999999999999
Q ss_pred EecCCCChHHhhcCceEEEecCChhHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 025140 86 EAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSMMATFSEGLLHSEKVGL 165 (257)
Q Consensus 86 dapV~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gl 165 (257)
|+||+|++..+..|++++++||+++++++++++|+.++.+++++|+.|.|+.+|+++|.+.++++++++|++.++++.|+
T Consensus 138 ~~pv~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~g~~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~ 217 (310)
T 3doj_A 138 EGPVSGSKKPAEDGQLIILAAGDKALFEESIPAFDVLGKRSFYLGQVGNGAKMKLIVNMIMGSMMNAFSEGLVLADKSGL 217 (310)
T ss_dssp ECCEECCHHHHHHTCEEEEEEECHHHHHHHHHHHHHHEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred eCCCCCChhHHhcCCeEEEEcCCHHHHHHHHHHHHHhCCCEEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcCCCchhhhccccccccCCCCCCCchhhHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHCCCCCcc
Q 025140 166 DPNVLVEVVSQGAISAPMYSLKGPSMIESLYPTAFPLKHQQKDLRLALGLAESVSQSTPIAAAANELYKVAKSHGLSDED 245 (257)
Q Consensus 166 d~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g~g~~d 245 (257)
|++.+.++++.+.+.||+++++.+++++++|.++|+++++.||++++++++++.|+++|+++.+.++|+.+.+.|+|++|
T Consensus 218 d~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~~KDl~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g~g~~d 297 (310)
T 3doj_A 218 SSDTLLDILDLGAMTNPMFKGKGPSMNKSSYPPAFPLKHQQKDMRLALALGDENAVSMPVAAAANEAFKKARSLGLGDLD 297 (310)
T ss_dssp CHHHHHHHHHHSTTCCHHHHHHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTCTTSB
T ss_pred CHHHHHHHHHhcccccHHHHHHhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHcCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhC
Q 025140 246 FSAVIEALKAK 256 (257)
Q Consensus 246 ~~a~~~~~~~~ 256 (257)
+++++++++++
T Consensus 298 ~~~~~~~~~~~ 308 (310)
T 3doj_A 298 FSAVIEAVKFS 308 (310)
T ss_dssp GGGGHHHHHCC
T ss_pred HHHHHHHHHhc
Confidence 99999999875
No 4
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=100.00 E-value=1.6e-47 Score=338.21 Aligned_cols=249 Identities=27% Similarity=0.429 Sum_probs=240.7
Q ss_pred hhhhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEE
Q 025140 6 NAFYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 6 ~~~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~v 85 (257)
+.+.+.|++.++|+.|++++||+||+|+|++.+++++++++ ++.+.+.+|++|||+||++|.+++++++.+.++|++|+
T Consensus 68 ~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~-~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~ 146 (320)
T 4dll_A 68 ASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFAQ-GVAAAMKPGSLFLDMASITPREARDHAARLGALGIAHL 146 (320)
T ss_dssp HHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTTT-CHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcch-hHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEEE
Confidence 56788899999999999999999999999999999999765 78888899999999999999999999999999999999
Q ss_pred EecCCCChHHhhcCceEEEecCChhHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 025140 86 EAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSMMATFSEGLLHSEKVGL 165 (257)
Q Consensus 86 dapV~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gl 165 (257)
|+||+|++..+..|++++++||+++++++++++|+.+ .+++|+|+.|.|+.+|+++|.+.+.++++++|++.++++.|+
T Consensus 147 ~~pv~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~-~~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~ 225 (320)
T 4dll_A 147 DTPVSGGTVGAEQGTLVIMAGGKPADFERSLPLLKVF-GRATHVGPHGSGQLTKLANQMIVGITIGAVAEALLFATKGGA 225 (320)
T ss_dssp ECCEECHHHHHHHTCEEEEEESCHHHHHHHHHHHHHH-EEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred eCCCcCCHhHHhcCCeeEEeCCCHHHHHHHHHHHHhc-CCEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999 889999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcCCCchhhhccccccccCCCCCCCchhhHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHCCCCCcc
Q 025140 166 DPNVLVEVVSQGAISAPMYSLKGPSMIESLYPTAFPLKHQQKDLRLALGLAESVSQSTPIAAAANELYKVAKSHGLSDED 245 (257)
Q Consensus 166 d~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g~g~~d 245 (257)
|++.+.++++.+.+.||.++.+.|+++.++|.++|+++++.||++++++++++.|+++|+++.+.++|+++.+.|+|++|
T Consensus 226 d~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~gf~~~~~~KDl~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g~g~~d 305 (320)
T 4dll_A 226 DMAKVKEAITGGFADSRVLQLHGQRMVERDFAPRARLSIQLKDMRNALATAQEIGFDAPITGLFEQLYAEGVEHGLTDLD 305 (320)
T ss_dssp CHHHHHHHHTTSTTCBHHHHTHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTTTTTSB
T ss_pred CHHHHHHHHHcccccCHHHHHhhhhhccCCCCCcccHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhcCCCCcC
Confidence 99999999999989999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhC
Q 025140 246 FSAVIEALKAK 256 (257)
Q Consensus 246 ~~a~~~~~~~~ 256 (257)
++++++++++.
T Consensus 306 ~~~~~~~~~~~ 316 (320)
T 4dll_A 306 QSGLFVELASR 316 (320)
T ss_dssp GGGHHHHHHHC
T ss_pred HHHHHHHHHHh
Confidence 99999999875
No 5
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=100.00 E-value=4.5e-47 Score=330.31 Aligned_cols=249 Identities=50% Similarity=0.807 Sum_probs=241.7
Q ss_pred hhhhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEE
Q 025140 6 NAFYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 6 ~~~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~v 85 (257)
+.+.+.|++.++|+.|++++||+||+|+|++.++++++++++++.+.+.+|++|||+||++|.+.+++++.+.++|++|+
T Consensus 38 ~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~~ 117 (287)
T 3pdu_A 38 APLVALGARQASSPAEVCAACDITIAMLADPAAAREVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFL 117 (287)
T ss_dssp HHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 56788899999999999999999999999999999999988888888999999999999999999999999999999999
Q ss_pred EecCCCChHHhhcCceEEEecCChhHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 025140 86 EAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSMMATFSEGLLHSEKVGL 165 (257)
Q Consensus 86 dapV~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gl 165 (257)
|+||+|+|..+..|++++++||+++++++++++|+.++.+++|+|+.|.|+.+|+++|.+.+.++.+++|++.++++.|+
T Consensus 118 ~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~ 197 (287)
T 3pdu_A 118 EAPVSGTKKPAEDGTLIILAAGDQSLFTDAGPAFAALGKKCLHLGEVGQGARMKLVVNMIMGQMMTALGEGMALGRNCGL 197 (287)
T ss_dssp ECCEECCHHHHHHTCEEEEEEECHHHHHHTHHHHHHHEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ECCccCCHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCEEEcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcCCCchhhhccccccccCCCCCCCchhhHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHCCCCCcc
Q 025140 166 DPNVLVEVVSQGAISAPMYSLKGPSMIESLYPTAFPLKHQQKDLRLALGLAESVSQSTPIAAAANELYKVAKSHGLSDED 245 (257)
Q Consensus 166 d~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g~g~~d 245 (257)
|++.+.++++.+.+.||+++++.+++++++|.++|+++++.||++++++++++.|+++|+++.+.++|+++.+.|+|++|
T Consensus 198 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g~~~~d 277 (287)
T 3pdu_A 198 DGGQLLEVLDAGAMANPMFKGKGQMLLSGEFPTSFPLKHMQKDLRLAVELGDRLGQPLHGAATANESFKRARAAGHADED 277 (287)
T ss_dssp CHHHHHHHHHHSTTCCHHHHHHHHHHHHTCCCCSSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHTTCTTSB
T ss_pred CHHHHHHHHHhccccChHHHhhccccccCCCCCCCcHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhcCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHH
Q 025140 246 FSAVIEALK 254 (257)
Q Consensus 246 ~~a~~~~~~ 254 (257)
+++++++++
T Consensus 278 ~~~~~~~~~ 286 (287)
T 3pdu_A 278 FAAVFRVLE 286 (287)
T ss_dssp GGGGHHHHC
T ss_pred HHHHHHHHh
Confidence 999999886
No 6
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=100.00 E-value=5.3e-47 Score=329.89 Aligned_cols=250 Identities=52% Similarity=0.822 Sum_probs=241.8
Q ss_pred hhhhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEE
Q 025140 6 NAFYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 6 ~~~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~v 85 (257)
+.+.+.|++.++|+.|++++||+||+|+|++.++++++++++++.+.+.+|++|||+||++|.+.+++.+.+.++|++|+
T Consensus 38 ~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~ 117 (287)
T 3pef_A 38 EELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFL 117 (287)
T ss_dssp HHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCEEE
Confidence 56888899999999999999999999999999999999988888888999999999999999999999999999999999
Q ss_pred EecCCCChHHhhcCceEEEecCChhHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 025140 86 EAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSMMATFSEGLLHSEKVGL 165 (257)
Q Consensus 86 dapV~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gl 165 (257)
|+||+|++..+..|++++++||+++++++++++|+.++.+++++|+.|.++.+|+++|++.+.++.+++|++.++++.|+
T Consensus 118 ~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~ 197 (287)
T 3pef_A 118 EAPVSGSKKPAEDGTLIILAAGDRNLYDEAMPGFEKMGKKIIHLGDVGKGAEMKLVVNMVMGGMMACFCEGLALGEKAGL 197 (287)
T ss_dssp ECCEECCHHHHHHTCEEEEEEECHHHHHHHHHHHHHHEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ECCCcCCHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCeEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcCCCchhhhccccccccCCCCCCCchhhHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHCCCCCcc
Q 025140 166 DPNVLVEVVSQGAISAPMYSLKGPSMIESLYPTAFPLKHQQKDLRLALGLAESVSQSTPIAAAANELYKVAKSHGLSDED 245 (257)
Q Consensus 166 d~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g~g~~d 245 (257)
|++.+.++++.+.+.||+++++.+++++++|.++|+++++.||++++++++++.|+++|+++.+.++|+++.+.|+|++|
T Consensus 198 d~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g~~~~d 277 (287)
T 3pef_A 198 ATDAILDVIGAGAMANPMFALKGGLIRDRNFAPAFPLKHMQKDLRLAVALGDRVGQPLVASAAANELFKGARAAGFGDED 277 (287)
T ss_dssp CHHHHHHHHHHSTTCCHHHHHHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHTTCTTSB
T ss_pred CHHHHHHHHHhcccccHHHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHcCCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHh
Q 025140 246 FSAVIEALKA 255 (257)
Q Consensus 246 ~~a~~~~~~~ 255 (257)
++++++++++
T Consensus 278 ~~~~~~~~~~ 287 (287)
T 3pef_A 278 FSAIFKTYER 287 (287)
T ss_dssp GGGGGGGGCC
T ss_pred HHHHHHHHhC
Confidence 9999988753
No 7
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=1.5e-46 Score=329.52 Aligned_cols=251 Identities=23% Similarity=0.386 Sum_probs=238.5
Q ss_pred hhhhhcCccc-cCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcE
Q 025140 6 NAFYYSRCRY-QPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASF 84 (257)
Q Consensus 6 ~~~~~~Ga~~-~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ 84 (257)
+.+.+.|+.. +.|+.|++++||+||+|||++.++++++++++++.+.+.+|++|||+||+.|.+.+++++.+.++|+.|
T Consensus 44 ~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~ 123 (303)
T 3g0o_A 44 ANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLNM 123 (303)
T ss_dssp HHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCEE
T ss_pred HHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCeE
Confidence 5678889988 899999999999999999999999999998888888899999999999999999999999999999999
Q ss_pred EEecCCCChHHhhcCceEEEecCChhHHHHHHHHHHHhcCCceecCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 025140 85 LEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGD-VGNGAAMKLVVNMIMGSMMATFSEGLLHSEKV 163 (257)
Q Consensus 85 vdapV~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~~G~-~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~ 163 (257)
+|+||+|+|..+..|++++++||+++++++++++|+.++.+++++|+ +|.|+.+|+++|++.+.++++++|++.++++.
T Consensus 124 ~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~~~~~~~~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~ 203 (303)
T 3g0o_A 124 LDAPVSGGAVKAAQGEMTVMASGSEAAFTRLKPVLDAVASNVYRISDTPGAGSTVKIIHQLLAGVHIAAAAEAMALAARA 203 (303)
T ss_dssp EECCEESCHHHHHTTCEEEEEECCHHHHHHHHHHHHHHEEEEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EeCCCCCChhhhhcCCeEEEeCCCHHHHHHHHHHHHHHCCCEEECCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999998 99999999999999999999999999999999
Q ss_pred CCCHHHHHHHHhhcCCCchhhhccccccccCCCCCCCchhhHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHCCCCC
Q 025140 164 GLDPNVLVEVVSQGAISAPMYSLKGPSMIESLYPTAFPLKHQQKDLRLALGLAESVSQSTPIAAAANELYKVAKSHGLSD 243 (257)
Q Consensus 164 Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g~g~ 243 (257)
|+|++.+.++++.+.+.||.++++.|+++.++|.++|+++++.||++++++++++.|+++|+++.+.++|+++.+.|+|+
T Consensus 204 G~d~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~kD~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g~g~ 283 (303)
T 3g0o_A 204 GIPLDVMYDVVTHAAGNSWMFENRMQHVVDGDYTPRSAVDIFVKDLGLVADTAKALRFPLPLASTALNMFTSASNAGYGK 283 (303)
T ss_dssp TCCHHHHHHHHTTSTTCCHHHHHHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTTTT
T ss_pred CCCHHHHHHHHHhcccCCHHHHhhhHHHhcCCCCCCCchHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhcCCCc
Confidence 99999999999999899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHhC
Q 025140 244 EDFSAVIEALKAK 256 (257)
Q Consensus 244 ~d~~a~~~~~~~~ 256 (257)
+|+++++++++++
T Consensus 284 ~d~~~~~~~~~~~ 296 (303)
T 3g0o_A 284 EDDSAVIKIFSGE 296 (303)
T ss_dssp SBGGGGGGGC---
T ss_pred cCHHHHHHHHHhc
Confidence 9999999988754
No 8
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=100.00 E-value=2.2e-44 Score=315.28 Aligned_cols=251 Identities=24% Similarity=0.398 Sum_probs=241.9
Q ss_pred hhhhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEE
Q 025140 6 NAFYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 6 ~~~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~v 85 (257)
+.+.+.|++.++++.|+++++|+||+|+|++.++++++.+++++.+.+.++++|||+||+.|.+.+++.+.+.++|++|+
T Consensus 40 ~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~~~ 119 (302)
T 2h78_A 40 DGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAML 119 (302)
T ss_dssp HHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHCCCeEcCCHHHHHhCCCeEEEECCCHHHHHHHHcCchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 56778899999999999999999999999999999999877788888999999999999999999999999999999999
Q ss_pred EecCCCChHHhhcCceEEEecCChhHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 025140 86 EAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSMMATFSEGLLHSEKVGL 165 (257)
Q Consensus 86 dapV~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gl 165 (257)
|+|+++++..+..+++++++||+++.+++++++|+.++.+++++|+.|.++.+|+++|++...++++++|++.++++.|+
T Consensus 120 ~~pv~~~~~~~~~g~l~~~~~g~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~ 199 (302)
T 2h78_A 120 DAPVSGGTAGAAAGTLTFMVGGDAEALEKARPLFEAMGRNIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANGL 199 (302)
T ss_dssp ECCEESCHHHHHHTCEEEEEESCHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEccCChhhHhcCCceEEeCCCHHHHHHHHHHHHHhCCCeEEcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcCCCchhhhcccc-------ccccCCCCCCCchhhHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Q 025140 166 DPNVLVEVVSQGAISAPMYSLKGP-------SMIESLYPTAFPLKHQQKDLRLALGLAESVSQSTPIAAAANELYKVAKS 238 (257)
Q Consensus 166 d~~~~~~~l~~~~~~s~~~~~~~~-------~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~ 238 (257)
|++.+.++++.+.+.||.++.+.| ++.+++|.++|+++++.||++++++++++.|+++|+++.+.++|+.+.+
T Consensus 200 ~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~kD~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~ 279 (302)
T 2h78_A 200 EAKVLAEIMRRSSGGNWALEVYNPWPGVMENAPASRDYSGGFMAQLMAKDLGLAQEAAQASASSTPMGSLALSLYRLLLK 279 (302)
T ss_dssp CHHHHHHHHHTSTTCCHHHHHCCCSTTTSTTSGGGGTTCSSSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCHHHHHhCCCcccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHh
Confidence 999999999999999999999999 8999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcchHHHHHHHHhC
Q 025140 239 HGLSDEDFSAVIEALKAK 256 (257)
Q Consensus 239 ~g~g~~d~~a~~~~~~~~ 256 (257)
.|+|++||+++++++++.
T Consensus 280 ~g~g~~d~~~~~~~~~~~ 297 (302)
T 2h78_A 280 QGYAERDFSVVQKLFDPT 297 (302)
T ss_dssp TTCTTSBGGGGHHHHCTT
T ss_pred cCCCCCCHHHHHHHHHHh
Confidence 999999999999999864
No 9
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=100.00 E-value=1.3e-44 Score=317.69 Aligned_cols=245 Identities=14% Similarity=0.177 Sum_probs=226.6
Q ss_pred hhhhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEE
Q 025140 6 NAFYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 6 ~~~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~v 85 (257)
+.+.+.|++.++|+.|++++||+||+|||++.++++++. ++++ ..+.+|++|||+||++|.+++++++.++++|++|+
T Consensus 46 ~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~-~~~l-~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~~~v 123 (306)
T 3l6d_A 46 AALVAAGAHLCESVKAALSASPATIFVLLDNHATHEVLG-MPGV-ARALAHRTIVDYTTNAQDEGLALQGLVNQAGGHYV 123 (306)
T ss_dssp HHHHHHTCEECSSHHHHHHHSSEEEECCSSHHHHHHHHT-STTH-HHHTTTCEEEECCCCCTTHHHHHHHHHHHTTCEEE
T ss_pred HHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhc-ccch-hhccCCCEEEECCCCCHHHHHHHHHHHHHcCCeEE
Confidence 567788999999999999999999999999999999983 2355 44679999999999999999999999999999999
Q ss_pred EecCCCChHHhhcCceEEEecCChhHHHHHHHHHHHhcCCceec--CC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025140 86 EAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYL--GD-VGNGAAMKLVVNMIMGSMMATFSEGLLHSEK 162 (257)
Q Consensus 86 dapV~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~~--G~-~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~ 162 (257)
|+||+|+|+.+..+++++|+||+++++++++|+|+.++.+++|+ |+ +|+|+.+| .+.++++++++|++.++++
T Consensus 124 dapv~g~~~~~~~~~~~i~~gg~~~~~~~~~~ll~~lg~~~~~~~~g~~~g~g~~~k----~~~~~~~~~~~Ea~~la~~ 199 (306)
T 3l6d_A 124 KGMIVAYPRNVGHRESHSIHTGDREAFEQHRALLEGLAGHTVFLPWDEALAFATVLH----AHAFAAMVTFFEAVGAGDR 199 (306)
T ss_dssp EEEEESCGGGTTCTTCEEEEEECHHHHHHHHHHHHTTCSEEEECCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
T ss_pred ecccccCcccccCCceEEEEcCCHHHHHHHHHHHHHhcCCEEEecCCCCccHHHHHH----HHHHHHHHHHHHHHHHHHH
Confidence 99999999999888999999999999999999999998899999 97 89999999 4557889999999999999
Q ss_pred cCCCHHHHHHHHhhcC--CCchhhhccccccccCCCCCC-CchhhHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHC
Q 025140 163 VGLDPNVLVEVVSQGA--ISAPMYSLKGPSMIESLYPTA-FPLKHQQKDLRLALGLAESVSQSTPIAAAANELYKVAKSH 239 (257)
Q Consensus 163 ~Gld~~~~~~~l~~~~--~~s~~~~~~~~~~~~~~~~~~-f~~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~ 239 (257)
.|+|++.++++++.+. +.||+++.+.|++++++|.|+ |+++++.||++++++++++.|+++|+++.+.++|+++.+.
T Consensus 200 ~Gld~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~KDl~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~ 279 (306)
T 3l6d_A 200 FGLPVSKTARLLLETSRFFVADALEEAVRRLETQDFKGDQARLDVHADAFAHIAQSLHAQGVWTPVFDAVCQVVQRAAAM 279 (306)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCTTSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHHhhhhcccHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHc
Confidence 9999999999999975 689999999999999999875 7999999999999999999999999999999999999999
Q ss_pred CCCCcchHHHHHHHHhC
Q 025140 240 GLSDEDFSAVIEALKAK 256 (257)
Q Consensus 240 g~g~~d~~a~~~~~~~~ 256 (257)
|+|++|++++++++++.
T Consensus 280 g~g~~d~~a~~~~~~~~ 296 (306)
T 3l6d_A 280 GYGDQDIAATTKSFARE 296 (306)
T ss_dssp TTTTSBGGGGGGGGC--
T ss_pred CCCccCHHHHHHHHHhH
Confidence 99999999999998764
No 10
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=100.00 E-value=1.9e-42 Score=302.59 Aligned_cols=232 Identities=25% Similarity=0.302 Sum_probs=219.1
Q ss_pred hhhhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEE
Q 025140 6 NAFYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 6 ~~~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~v 85 (257)
+.+.+.|++.++|+.|+++ ||+||+|||++.++++++ +++.+.+.++++|||+||+.|.+++++++.+.++|++|+
T Consensus 52 ~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~---~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~ 127 (296)
T 3qha_A 52 TPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVV---GELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIHIV 127 (296)
T ss_dssp HHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHH---HHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEE
T ss_pred HHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHH---HHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEE
Confidence 6688889999999999999 999999999999999998 678888899999999999999999999999999999999
Q ss_pred EecCCCChHHhhcCceEEEecCChhHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 025140 86 EAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSMMATFSEGLLHSEKVGL 165 (257)
Q Consensus 86 dapV~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gl 165 (257)
|+||+|++..+..|++++++||+++++++++++|+.++.+++|+|++|.|+.+|+++|.+.+.++++++|++.++++.|+
T Consensus 128 ~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~ 207 (296)
T 3qha_A 128 DAPVSGGAAAAARGELATMVGADREVYERIKPAFKHWAAVVIHAGEPGAGTRMKLARNMLTFTSYAAACEAMKLAEAAGL 207 (296)
T ss_dssp ECCEESCHHHHHHTCEEEEEECCHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred eCCCcCCHHHHhcCCccEEecCCHHHHHHHHHHHHHHcCCeEEcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHH------HHHHhhcCCCchhhhccccccccCCCCCCCch-----hhHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Q 025140 166 DPNVL------VEVVSQGAISAPMYSLKGPSMIESLYPTAFPL-----KHQQKDLRLALGLAESVSQSTPIAAAANELYK 234 (257)
Q Consensus 166 d~~~~------~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~-----~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~ 234 (257)
|++.+ +++++.+.+.||..+ .++++++ |.|+|++ +++.||++++++++++.|+++|+++.+.++|+
T Consensus 208 d~~~~~~~~~~~~~i~~~~~~s~~~~--~~~~~~~-~~~~f~~~~~~~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~ 284 (296)
T 3qha_A 208 DLQALGRVVRHTDALTGGPGAIMVRD--NMKDLEP-DNFLYQPFLHTRGLGEKDLSLALALGEAVSVDLPLARLAYEGLA 284 (296)
T ss_dssp CHHHHHHHHHHHHHHHCCGGGGCCCS--SCSCCCT-TSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred CHHHHhhhcchHHHHhcCcccCHHhh--chhhhhc-CCCCCchhhhhhHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 99999 999999888886554 8888888 8899999 99999999999999999999999999999999
Q ss_pred HHHHCCCCCc
Q 025140 235 VAKSHGLSDE 244 (257)
Q Consensus 235 ~a~~~g~g~~ 244 (257)
.+.+.||+++
T Consensus 285 ~~~~~g~~~~ 294 (296)
T 3qha_A 285 AGLGVPHKEK 294 (296)
T ss_dssp HHHTCCC---
T ss_pred HHHhcCcccc
Confidence 9999999664
No 11
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=100.00 E-value=3.3e-38 Score=275.39 Aligned_cols=250 Identities=27% Similarity=0.469 Sum_probs=234.4
Q ss_pred hhhhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEE
Q 025140 6 NAFYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 6 ~~~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~v 85 (257)
+.+.+.|.+...++.|+++++|+||+|+|++.++++++++.+++.+.+.++++||++||..|.+.+++.+.+.++|+.|+
T Consensus 42 ~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~ 121 (299)
T 1vpd_A 42 ADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEML 121 (299)
T ss_dssp HHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEE
T ss_pred HHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHhCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEE
Confidence 45667799999999999999999999999999999999776677777889999999999999999999999988899999
Q ss_pred EecCCCChHHhhcCceEEEecCChhHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 025140 86 EAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSMMATFSEGLLHSEKVGL 165 (257)
Q Consensus 86 dapV~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gl 165 (257)
++|++++++.+..+.+++++||+++.+++++++|+.++.+++++++.|.+..+|+++|.+.+..+.++.|++.++++.|+
T Consensus 122 ~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~ 201 (299)
T 1vpd_A 122 DAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVVHTGDIGAGNVTKLANQVIVALNIAAMSEALTLATKAGV 201 (299)
T ss_dssp ECCEESHHHHHHHTCEEEEEESCHHHHHHHHHHHHTTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EecCCCCHhHHhcCCEEEEeCCCHHHHHHHHHHHHHHcCCeEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcCCCchhhhccccccccCCCCCCCchhhHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHCCCCCcc
Q 025140 166 DPNVLVEVVSQGAISAPMYSLKGPSMIESLYPTAFPLKHQQKDLRLALGLAESVSQSTPIAAAANELYKVAKSHGLSDED 245 (257)
Q Consensus 166 d~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g~g~~d 245 (257)
+++.+.+++..+...++.+..+.|.++.++|.++|+++.+.||++.+++++++.|+++|+.+.+.++|+++.+.|+|++|
T Consensus 202 ~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~~p~~~~~~~~~~~~~~~g~~~~d 281 (299)
T 1vpd_A 202 NPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIKDLANALDTSHGVGAQLPLTAAVMEMMQALRADGHGNDD 281 (299)
T ss_dssp CHHHHHHHHTTSTTCCHHHHHHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHTTCTTSB
T ss_pred CHHHHHHHHHccCCCCHHHHHhhhHhhcCCCCCCCChHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhcCCCccC
Confidence 99999999998877788887788889999998999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHh
Q 025140 246 FSAVIEALKA 255 (257)
Q Consensus 246 ~~a~~~~~~~ 255 (257)
|+++++++++
T Consensus 282 ~~~~~~~~~~ 291 (299)
T 1vpd_A 282 HSALACYYEK 291 (299)
T ss_dssp GGGHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999875
No 12
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.3e-39 Score=283.96 Aligned_cols=236 Identities=19% Similarity=0.289 Sum_probs=210.2
Q ss_pred hhhhhcCccccC-CHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcE
Q 025140 6 NAFYYSRCRYQP-SPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASF 84 (257)
Q Consensus 6 ~~~~~~Ga~~~~-s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ 84 (257)
+.+.+.|+ +. |+.|++++||+||+|||++..++.+ +++.+.+.++++|||+||++|.+.+++++.++++|++|
T Consensus 69 ~~~~~~g~--~~~s~~e~~~~aDvVi~avp~~~~~~~~----~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~ 142 (317)
T 4ezb_A 69 ARAAELGV--EPLDDVAGIACADVVLSLVVGAATKAVA----ASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSF 142 (317)
T ss_dssp HHHHHTTC--EEESSGGGGGGCSEEEECCCGGGHHHHH----HHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEE
T ss_pred HHHHHCCC--CCCCHHHHHhcCCEEEEecCCHHHHHHH----HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeE
Confidence 34556687 77 8999999999999999998887755 46778888999999999999999999999999999999
Q ss_pred EEecCCCChHHhhcCceEEEecCChhHHHHHHHHHHHhcCCceecCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 025140 85 LEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGD-VGNGAAMKLVVNMIMGSMMATFSEGLLHSEKV 163 (257)
Q Consensus 85 vdapV~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~~G~-~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~ 163 (257)
+|+||+|+ ..+..+++++++||+++ ++++++|+.++.+++++|+ +|+|+.+|+++|.+.++++++++|++.++++.
T Consensus 143 ~d~pv~g~-~~a~~g~l~i~vgg~~~--~~~~~ll~~~g~~v~~~g~~~g~a~~~Kl~~N~~~~~~~~~~~E~~~la~~~ 219 (317)
T 4ezb_A 143 VEGAVMAR-VPPYAEKVPILVAGRRA--VEVAERLNALGMNLEAVGETPGQASSLKMIRSVMIKGVEALLIEALSSAERA 219 (317)
T ss_dssp EEEEECSC-STTTGGGSEEEEESTTH--HHHHHHHHTTTCEEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EeccCCCC-chhhcCCEEEEEeCChH--HHHHHHHHHhCCCeEEeCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999995 56778899999999988 8999999999999999998 99999999999999999999999999999999
Q ss_pred CCCHHHHHHHHhhcCCCchhhhccccccccCCCCCCCchhhHHHHHHHHHHHHHhcCCCcHHHHHHHHH----HHHHHHC
Q 025140 164 GLDPNVLVEVVSQGAISAPMYSLKGPSMIESLYPTAFPLKHQQKDLRLALGLAESVSQSTPIAAAANEL----YKVAKSH 239 (257)
Q Consensus 164 Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~----~~~a~~~ 239 (257)
|+|++ +++.+..+.. ++.+..+.+++++++|.++|+ +.||++++.+++++.|+++|+++.+.++ |+.+.+.
T Consensus 220 Gid~~-~~~~l~~~~~-~~~~~~~~~~~~~~~~~~g~~---~~KDl~~~~~~a~~~g~~~pl~~~~~~~~~~a~~~~~~~ 294 (317)
T 4ezb_A 220 GVTER-ILDSVQETFP-GLDWRDVADYYLSRTFEHGAR---RVTEMTEAAETIESFGLNAPMSRAACETIAAAHAAMKDQ 294 (317)
T ss_dssp TCHHH-HHHHHHHHST-TSCHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHTTS
T ss_pred CCCHH-HHHHHHhcCc-cccHHHhhhhhhcCCCCCCcc---hHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHc
Confidence 99995 6777776542 222356788899999988887 4999999999999999999999999999 8888889
Q ss_pred CCC-CcchHHHHHHHHh
Q 025140 240 GLS-DEDFSAVIEALKA 255 (257)
Q Consensus 240 g~g-~~d~~a~~~~~~~ 255 (257)
|++ ++||+++++.+++
T Consensus 295 g~~~~~~~~~~~~~~~~ 311 (317)
T 4ezb_A 295 GLSVNDGYRGFVPVLAR 311 (317)
T ss_dssp SCCTTSHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHh
Confidence 997 9999999998764
No 13
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=100.00 E-value=2.1e-37 Score=269.91 Aligned_cols=252 Identities=28% Similarity=0.425 Sum_probs=228.9
Q ss_pred hhhhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEE
Q 025140 6 NAFYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 6 ~~~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~v 85 (257)
+.+.+.|.+.++++.|+++++|+||+|+|++.++++++...+++.+.+.++++||++|+++|++.+++.+.+.++|..|+
T Consensus 37 ~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~~g~~~~ 116 (296)
T 2gf2_A 37 KEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFM 116 (296)
T ss_dssp HHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTSGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHcCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHhCchhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 45777799999999999999999999999999999998654456667788999999999999999999998888899999
Q ss_pred EecCCCChHHhhcCceEEEecCChhHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 025140 86 EAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSMMATFSEGLLHSEKVGL 165 (257)
Q Consensus 86 dapV~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gl 165 (257)
++|+++++..+..+++.+++||+++.+++++++|+.++.+++++|..|.|..+|+++|.+.+.++.++.|++.++++.|+
T Consensus 117 ~~p~~~g~~~a~~~~~~~~~~~~~~~~~~v~~l~~~~g~~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~~~~~~G~ 196 (296)
T 2gf2_A 117 DAPVSGGVGAARSGNLTFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGL 196 (296)
T ss_dssp ECCEESHHHHHHHTCEEEEEESCGGGHHHHHHHHTTTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EcCCCCChhHHhcCcEEEEeCCCHHHHHHHHHHHHHHcCCeEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999989999999999999999999999999999989999999999999999999989999999999999999999
Q ss_pred CHHHHHHHHhhcCCCchhhhccc--c-----ccccCCCCCCCchhhHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Q 025140 166 DPNVLVEVVSQGAISAPMYSLKG--P-----SMIESLYPTAFPLKHQQKDLRLALGLAESVSQSTPIAAAANELYKVAKS 238 (257)
Q Consensus 166 d~~~~~~~l~~~~~~s~~~~~~~--~-----~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~ 238 (257)
+++.+.+++..+.+.++++.... | .+..++|.++|+++++.||++.+.+++++.|+++|+.+.+.++|+.+.+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~~p~~~~~~~~~~~~~~ 276 (296)
T 2gf2_A 197 DPKLLAKILNMSSGRCWSSDTYNPVPGVMDGVPSANNYQGGFGTTLMAKDLGLAQDSATSTKSPILLGSLAHQIYRMMCA 276 (296)
T ss_dssp CHHHHHHHHHTSTTCBHHHHHSCSSTTTCSSSGGGGTTCSSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHhCcccCHHHHhcCCcccccccchhccCCCCCCchHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHH
Confidence 99999999998777777766543 2 2345688889999999999999999999999999999999999999999
Q ss_pred CCCCCcchHHHHHHHHhCC
Q 025140 239 HGLSDEDFSAVIEALKAKK 257 (257)
Q Consensus 239 ~g~g~~d~~a~~~~~~~~~ 257 (257)
.|+|++||+++++++++++
T Consensus 277 ~g~~~~d~~~~~~~~~~~~ 295 (296)
T 2gf2_A 277 KGYSKKDFSSVFQFLREEE 295 (296)
T ss_dssp TTCTTSBGGGHHHHHSCCC
T ss_pred cCCCccCHHHHHHHHHhcc
Confidence 9999999999999998654
No 14
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=100.00 E-value=1.8e-37 Score=270.03 Aligned_cols=251 Identities=29% Similarity=0.482 Sum_probs=233.7
Q ss_pred chhhhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcE
Q 025140 5 NNAFYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASF 84 (257)
Q Consensus 5 ~~~~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ 84 (257)
.+.+.+.|.+.+.++.|+++++|+||+|+|++.++++++.+.+++.+.+.++++||++|+..|.+.+++.+.+.++|++|
T Consensus 38 ~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~ 117 (295)
T 1yb4_A 38 ADELLSLGAVNVETARQVTEFADIIFIMVPDTPQVEDVLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQRVNEMGADY 117 (295)
T ss_dssp CHHHHTTTCBCCSSHHHHHHTCSEEEECCSSHHHHHHHHHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEE
T ss_pred HHHHHHcCCcccCCHHHHHhcCCEEEEECCCHHHHHHHHhCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeE
Confidence 35566778888999999999999999999999999999965557777788999999999999999999999998889999
Q ss_pred EEecCCCChHHhhcCceEEEecCChhHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 025140 85 LEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSMMATFSEGLLHSEKVG 164 (257)
Q Consensus 85 vdapV~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~G 164 (257)
+++|+++++..+..|.+++++||+++.+++++++|+.++.+++++|+.|.+..+|+++|.+...++.++.|++.++++.|
T Consensus 118 ~~~p~~~~~~~a~~g~~~~~~~~~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~E~~~l~~~~G 197 (295)
T 1yb4_A 118 LDAPVSGGEIGAREGTLSIMVGGEQKVFDRVKPLFDILGKNITLVGGNGDGQTCKVANQIIVALNIEAVSEALVFASKAG 197 (295)
T ss_dssp EECCEESHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEccCCCCHHHHHcCCeEEEECCCHHHHHHHHHHHHHhcCCEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999989999999999999999999999999998999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcCCCchhhhccccccccCCCCCCCchhhHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHCCCCCc
Q 025140 165 LDPNVLVEVVSQGAISAPMYSLKGPSMIESLYPTAFPLKHQQKDLRLALGLAESVSQSTPIAAAANELYKVAKSHGLSDE 244 (257)
Q Consensus 165 ld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g~g~~ 244 (257)
++++.+.+++..+...++.+..+.+.++.+++.++|++..+.||++++++.+++.|+++|+.+.+.+.|+++.+.|+|++
T Consensus 198 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g~~~~ 277 (295)
T 1yb4_A 198 ADPVRVRQALMGGFASSRILEVHGERMINRTFEPGFKIALHQKDLNLALQSAKALALNLPNTATCQELFNTCAANGGSQL 277 (295)
T ss_dssp CCHHHHHHHHTSSSSCBHHHHHHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTCTTS
T ss_pred CCHHHHHHHHHcCCCCCHHHHHhhHHHhcCCCCCCCchHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHcCCCcc
Confidence 99999999999887777877777788888899999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHh
Q 025140 245 DFSAVIEALKA 255 (257)
Q Consensus 245 d~~a~~~~~~~ 255 (257)
||+++++++++
T Consensus 278 d~~~~~~~~~~ 288 (295)
T 1yb4_A 278 DHSAMVQALEL 288 (295)
T ss_dssp BGGGGHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 99999999875
No 15
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=100.00 E-value=3.7e-37 Score=268.94 Aligned_cols=250 Identities=28% Similarity=0.463 Sum_probs=233.6
Q ss_pred hhhhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEE
Q 025140 6 NAFYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 6 ~~~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~v 85 (257)
+.+.+.|.+.++++.|+++++|+||+|+|++.++++++.+.+++.+.+.++++||++|+..|.+.+++.+.+.++|++|+
T Consensus 41 ~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~~~ 120 (301)
T 3cky_A 41 AAVVAQGAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYV 120 (301)
T ss_dssp HHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEE
Confidence 45666788889999999999999999999999999999765567777889999999999999999999999988899999
Q ss_pred EecCCCChHHhhcCceEEEecCChhHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 025140 86 EAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSMMATFSEGLLHSEKVGL 165 (257)
Q Consensus 86 dapV~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gl 165 (257)
++|+++++..+..|.+++++||+++.+++++++|+.++.+++++|+.|.+..+|+++|.+....+.++.|++.++++.|+
T Consensus 121 ~~p~~~~~~~a~~g~~~~~~~g~~~~~~~v~~ll~~~g~~~~~~~~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~ 200 (301)
T 3cky_A 121 DAPVSGGTKGAEAGTLTIMVGASEAVFEKIQPVLSVIGKDIYHVGDTGAGDAVKIVNNLLLGCNMASLAEALVLGVKCGL 200 (301)
T ss_dssp ECCEESHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EccCCCCHHHHHcCCeEEEECCCHHHHHHHHHHHHHhcCCEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999889889989999999999999999999999988899999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcCCCchhhhcccc-ccccCCCCCCCchhhHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHCCCCCc
Q 025140 166 DPNVLVEVVSQGAISAPMYSLKGP-SMIESLYPTAFPLKHQQKDLRLALGLAESVSQSTPIAAAANELYKVAKSHGLSDE 244 (257)
Q Consensus 166 d~~~~~~~l~~~~~~s~~~~~~~~-~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g~g~~ 244 (257)
+++.+.+++..+...++.+..+.| .++.++|.++|+++.+.||+..+++++++.|+++|+.+.+.++|+++.+.|+|++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~~p~~~~~~~~~~~~~~~g~~~~ 280 (301)
T 3cky_A 201 KPETMQEIIGKSSGRSYAMEAKMEKFIMSGDFAGGFAMDLQHKDLGLALEAGKEGNVPLPMTAMATQIFEGGRAMGLGRE 280 (301)
T ss_dssp CHHHHHHHHHTSTTCBHHHHHHCCCCCCTCCCSSSSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHTTCTTS
T ss_pred CHHHHHHHHHcCCCCCHHHHHhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHhcCCCcc
Confidence 999999999988777888887888 8999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHh
Q 025140 245 DFSAVIEALKA 255 (257)
Q Consensus 245 d~~a~~~~~~~ 255 (257)
||+++++++++
T Consensus 281 d~~~~~~~~~~ 291 (301)
T 3cky_A 281 DMSAVIKVWEQ 291 (301)
T ss_dssp BGGGGHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 99999999875
No 16
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=100.00 E-value=3.9e-38 Score=277.28 Aligned_cols=226 Identities=19% Similarity=0.209 Sum_probs=207.0
Q ss_pred hhhhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHc--CCc
Q 025140 6 NAFYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKAT--GAS 83 (257)
Q Consensus 6 ~~~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~--G~~ 83 (257)
+.+.+.|++.++|+.|++++||+||+|||++..++ ++ +++.+.+.++++|||+||+.|.+++++.+.+.++ |++
T Consensus 64 ~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~-~~---~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~ 139 (312)
T 3qsg_A 64 PRAEELGVSCKASVAEVAGECDVIFSLVTAQAALE-VA---QQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQ 139 (312)
T ss_dssp HHHHHTTCEECSCHHHHHHHCSEEEECSCTTTHHH-HH---HHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCE
T ss_pred HHHHHCCCEEeCCHHHHHhcCCEEEEecCchhHHH-HH---HhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCe
Confidence 45777899999999999999999999999988776 44 5677888899999999999999999999999998 999
Q ss_pred EEEecCCCChHHhhcCceEEEecCChhHHHHHHHHHHHhcCCceecCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025140 84 FLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGD-VGNGAAMKLVVNMIMGSMMATFSEGLLHSEK 162 (257)
Q Consensus 84 ~vdapV~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~~G~-~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~ 162 (257)
|+|+||+|++.. ..+++++++||+++ ++++++|+.++.+++|+|+ +|+|+.+|+++|.+.++++++++|++.++++
T Consensus 140 ~vd~pv~g~~~~-~~g~l~i~vgg~~~--~~~~~ll~~~g~~~~~~g~~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~ 216 (312)
T 3qsg_A 140 YAAVAVMSAVKP-HGHRVPLVVDGDGA--RRFQAAFTLYGCRIEVLDGEVGGAALLKMCRSAVLKGLEALFLEALAAAEK 216 (312)
T ss_dssp EEEEEECSCSTT-TGGGSEEEEESTTH--HHHHHHHHTTTCEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEeccccCCchh-hcCCEEEEecCChH--HHHHHHHHHhCCCeEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999997655 48899999999988 9999999999999999998 8999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHhhcCCCchhhhccccccccCCCCCCCchhhHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHCCCC
Q 025140 163 VGLDPNVLVEVVSQGAISAPMYSLKGPSMIESLYPTAFPLKHQQKDLRLALGLAESVSQSTPIAAAANELYKVAKSHGLS 242 (257)
Q Consensus 163 ~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g~g 242 (257)
.|+|+ .+++.++.+. .++.++.+.+++++++|.++|++ .||++++++++++.|+++|+++.+.++|+++.+.|++
T Consensus 217 ~Gld~-~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~g~~~---~KDl~~~~~~a~~~g~~~pl~~~~~~~~~~~~~~g~~ 291 (312)
T 3qsg_A 217 MGLAD-RVLASLDASF-PEHHLRDLALYLVERNLEHADRR---AHELGEVAATLCSVGVEPLVAEAGYRRLTRVAQVRAA 291 (312)
T ss_dssp TTCHH-HHHHHHHHHS-GGGTHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCH-HHHHHHHhcC-CchhHHHhhhHhhcCCCCcccch---HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHhcCCc
Confidence 99999 5788998876 46777888899999999888875 7999999999999999999999999999999998876
Q ss_pred C
Q 025140 243 D 243 (257)
Q Consensus 243 ~ 243 (257)
+
T Consensus 292 ~ 292 (312)
T 3qsg_A 292 L 292 (312)
T ss_dssp C
T ss_pred c
Confidence 5
No 17
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=100.00 E-value=1.4e-36 Score=267.37 Aligned_cols=249 Identities=43% Similarity=0.709 Sum_probs=231.5
Q ss_pred hhhhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEE
Q 025140 6 NAFYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 6 ~~~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~v 85 (257)
+.+.+.|.+...++.|+++++|+||+|+|++.++++++....++.+.+.++++|||+||+.|...+++++.+.++|..|+
T Consensus 67 ~~~~~~g~~~~~~~~~~~~~~DvVi~av~~~~~~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~~~v 146 (316)
T 2uyy_A 67 DLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFL 146 (316)
T ss_dssp HHHHHTTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHcCCEEcCCHHHHHhcCCEEEEeCCCHHHHHHHHcCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 45667788889999999999999999999999999998654456677889999999999999999999999988899999
Q ss_pred EecCCCChHHhhcCceEEEecCChhHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 025140 86 EAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSMMATFSEGLLHSEKVGL 165 (257)
Q Consensus 86 dapV~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gl 165 (257)
++|+++++..+..|.+.+++||+++.+++++++|+.++.+++++|++|.+...|+++|.+....+..+.|++.++++.|+
T Consensus 147 ~~p~~g~~~~~~~g~~~~~~~g~~~~~~~v~~ll~~~g~~~~~~~~~~~~~~~K~~~n~~~~~~~~~~~Ea~~la~~~G~ 226 (316)
T 2uyy_A 147 EAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQ 226 (316)
T ss_dssp ECCEESCHHHHHHTCEEEEEEECHHHHHHTHHHHHHHEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EcCccCChhHHhhCCEEEEeCCCHHHHHHHHHHHHHhcCCEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcCCCchhhhccccccccCCCCCCCchhhHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHCCCCCcc
Q 025140 166 DPNVLVEVVSQGAISAPMYSLKGPSMIESLYPTAFPLKHQQKDLRLALGLAESVSQSTPIAAAANELYKVAKSHGLSDED 245 (257)
Q Consensus 166 d~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g~g~~d 245 (257)
+++.+.+++..+...++.+..+.|.++.++|.++|+++.+.||++.+++++++.|+++|+.+.+.+.|+++.+.|+|++|
T Consensus 227 ~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~~p~~~~v~~~~~~a~~~g~g~~d 306 (316)
T 2uyy_A 227 SQQTLLDILNQGQLASIFLDQKCQNILQGNFKPDFYLKYIQKDLRLAIALGDAVNHPTPMAAAANEVYKRAKALDQSDND 306 (316)
T ss_dssp CHHHHHHHHHHSTTCCHHHHHHHHHHHHTCCCCSSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTCTTSB
T ss_pred CHHHHHHHHHcCCCCCHHHHHhhHHhhcCCCCCCCcHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHhcCCCccC
Confidence 99999999999877788887778888888999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHH
Q 025140 246 FSAVIEALK 254 (257)
Q Consensus 246 ~~a~~~~~~ 254 (257)
|++++++++
T Consensus 307 ~~~~~~~~~ 315 (316)
T 2uyy_A 307 MSAVYRAYI 315 (316)
T ss_dssp GGGGGGGTC
T ss_pred HHHHHHHHh
Confidence 999998764
No 18
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=100.00 E-value=3.2e-36 Score=261.25 Aligned_cols=245 Identities=25% Similarity=0.366 Sum_probs=226.0
Q ss_pred hhhhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEE
Q 025140 6 NAFYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 6 ~~~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~v 85 (257)
+.+.+.|.+.++ +.|+++++|+||+|+|++.++++++ +++.+.+.++++||++|+..|...+++.+.+.++|.+|+
T Consensus 37 ~~~~~~g~~~~~-~~~~~~~~D~vi~~v~~~~~~~~v~---~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~ 112 (289)
T 2cvz_A 37 LRHQEEFGSEAV-PLERVAEARVIFTCLPTTREVYEVA---EALYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYL 112 (289)
T ss_dssp HHHHHHHCCEEC-CGGGGGGCSEEEECCSSHHHHHHHH---HHHTTTCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEE
T ss_pred HHHHHCCCcccC-HHHHHhCCCEEEEeCCChHHHHHHH---HHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 445666777777 8888999999999999998888888 566677788999999999999999999999988899999
Q ss_pred EecCCCChHHhhcCceEEEecCChhHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 025140 86 EAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSMMATFSEGLLHSEKVGL 165 (257)
Q Consensus 86 dapV~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gl 165 (257)
++|+++++..+..|.+++++||+++.+++++++| .++.+++++++.+.+..+|+++|.+...++.++.|++.++++.|+
T Consensus 113 ~~p~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ll-~~g~~~~~~~~~~~~~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~ 191 (289)
T 2cvz_A 113 DAPVSGGTSGAEAGTLTVMLGGPEEAVERVRPFL-AYAKKVVHVGPVGAGHAVKAINNALLAVNLWAAGEGLLALVKQGV 191 (289)
T ss_dssp ECCEESHHHHHHHTCEEEEEESCHHHHHHHGGGC-TTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EecCCCChhHHhhCCeEEEECCCHHHHHHHHHHH-hhcCCeEEcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 9999999999999999999999999999999999 999888999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcCCCchhhhcccc-ccccCCCCCCCchhhHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHCCCCCc
Q 025140 166 DPNVLVEVVSQGAISAPMYSLKGP-SMIESLYPTAFPLKHQQKDLRLALGLAESVSQSTPIAAAANELYKVAKSHGLSDE 244 (257)
Q Consensus 166 d~~~~~~~l~~~~~~s~~~~~~~~-~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g~g~~ 244 (257)
+++.+.+++..+...++++..+.| .++.+++.++|+++.+.||++.+++.+++.|+++|+.+.+.+.|+++.+.|+|++
T Consensus 192 ~~~~~~~~~~~~~~~s~~~~~~~~~~~l~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~~p~~~~v~~~~~~a~~~g~~~~ 271 (289)
T 2cvz_A 192 SAEKALEVINASSGRSNATENLIPQRVLTRAFPKTFALGLLVKDLGIAMGVLDGEKAPSPLLRLAREVYEMAKRELGPDA 271 (289)
T ss_dssp CHHHHHHHHTTSTTCBHHHHHTHHHHTTTSCCCCSSBHHHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHCTTS
T ss_pred CHHHHHHHHHccCCCCHHHHHhccchhhcCCCCCCcChHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHcCCCcc
Confidence 999999999988777788877778 7888999899999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHh
Q 025140 245 DFSAVIEALKA 255 (257)
Q Consensus 245 d~~a~~~~~~~ 255 (257)
||+++++++++
T Consensus 272 d~~~~~~~~~~ 282 (289)
T 2cvz_A 272 DHVEALRLLER 282 (289)
T ss_dssp BGGGGHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 99999999875
No 19
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=100.00 E-value=2.5e-35 Score=263.47 Aligned_cols=238 Identities=19% Similarity=0.275 Sum_probs=204.6
Q ss_pred hhhhhcCccccCCHHHHHhcC---CEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCC
Q 025140 6 NAFYYSRCRYQPSPDEVAASC---DVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGA 82 (257)
Q Consensus 6 ~~~~~~Ga~~~~s~~ea~~~a---dvvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~ 82 (257)
+.+.+.|++.+.|+.|+++++ |+||+|||++ ++++++ +++.+.+.+|++|||+||+.|.+++++++.+.++|+
T Consensus 59 ~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~-~v~~vl---~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~ 134 (358)
T 4e21_A 59 QALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA-VVDSML---QRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGI 134 (358)
T ss_dssp HHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGG-GHHHHH---HHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTC
T ss_pred HHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHH-HHHHHH---HHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCC
Confidence 568888999999999999999 9999999999 899998 678888899999999999999999999999999999
Q ss_pred cEEEecCCCChHHhhcCceEEEecCChhHHHHHHHHHHHhc--------------------CCceecCCCchHHHHHHHH
Q 025140 83 SFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMG--------------------KSRFYLGDVGNGAAMKLVV 142 (257)
Q Consensus 83 ~~vdapV~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~--------------------~~~~~~G~~G~a~~~Kl~~ 142 (257)
+|+|+||+|++.+++.|+ ++|+||+++++++++|+|+.++ .+++|+|+.|+|+.+|+++
T Consensus 135 ~~vdapVsGg~~~a~~G~-~im~GG~~~a~~~~~~ll~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~G~~G~g~~~Kl~~ 213 (358)
T 4e21_A 135 TYVDVGTSGGIFGLERGY-CLMIGGEKQAVERLDPVFRTLAPGIGAAPRTPGREKREGTAELGYLHCGPSGAGHFVKMVH 213 (358)
T ss_dssp EEEEEEEECGGGHHHHCC-EEEEESCHHHHHHTHHHHHHHSCCGGGSCCCTTGGGCCSSGGGTEEEEESTTHHHHHHHHH
T ss_pred EEEeCCCCCCHHHHhcCC-eeeecCCHHHHHHHHHHHHHhccccccCcccccccccccccccceEEECCccHHHHHHHHH
Confidence 999999999999999999 9999999999999999999999 5789999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHc------------------------CCCHHHHHHHHhhcC-CCchhhhccccccccCCCC
Q 025140 143 NMIMGSMMATFSEGLLHSEKV------------------------GLDPNVLVEVVSQGA-ISAPMYSLKGPSMIESLYP 197 (257)
Q Consensus 143 n~~~~~~~~~~~Ea~~la~~~------------------------Gld~~~~~~~l~~~~-~~s~~~~~~~~~~~~~~~~ 197 (257)
|.+.++.+++++|++.++++. |+|++.++++++.++ ..||+++...+.+. ++
T Consensus 214 n~l~~~~i~~~aE~~~la~~a~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~~~~~~g~~~~s~~l~~~~~~~~-~~-- 290 (358)
T 4e21_A 214 NGIEYGLMAAYAEGLNILHHANAGKEGQGADAETAPLRNPDFYRYDLDLADITEVWRRGSVISSWLLDLSATALL-DS-- 290 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCC--------------CGGGCCCCCCHHHHHHHHTTTSTTCBHHHHHHHHHHH-HC--
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccccccccccccccchhcccCCCHHHHHHHHhCccHHHHHHHHHHHHHHh-hC--
Confidence 999999999999999999998 899999999999987 79999987665443 33
Q ss_pred CCC-chhhHHHHH---HHHHHHHHhcCCCcHHHHHHHHHHHHHHHCCCCCcchHH-HHHHHHh
Q 025140 198 TAF-PLKHQQKDL---RLALGLAESVSQSTPIAAAANELYKVAKSHGLSDEDFSA-VIEALKA 255 (257)
Q Consensus 198 ~~f-~~~~~~KD~---~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g~g~~d~~a-~~~~~~~ 255 (257)
|.+ .+....||. +.+++.+.+.|+|+|++..+ +|.+...+ ++.+++. ++..+|+
T Consensus 291 p~~~~~~~~~~d~g~~r~~~~~A~~~gvp~p~~~~a--l~~~~~s~--~~~~~~~~l~~a~r~ 349 (358)
T 4e21_A 291 PDLQEFQGRVSDSGEGRWTVAAAIDEGVPAHVLSSA--LYERFSSR--GEDDFANRLLSAMRY 349 (358)
T ss_dssp TTCTTC--CCCCCSHHHHHHHHHHHHTCCCHHHHHH--HHHHHHHT--TTTHHHHHHHHHHC-
T ss_pred CChHHHHHHHHhcCcHHHHHHHHHHcCCChHHHHHH--HHHHHHHC--CCcccHHHHHHHHHH
Confidence 222 123333444 77999999999999999876 44444443 5566654 7766654
No 20
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=100.00 E-value=7.7e-34 Score=262.05 Aligned_cols=227 Identities=14% Similarity=0.147 Sum_probs=197.9
Q ss_pred hhhhhcC---c--cccCCHHHHHhc---CCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHH
Q 025140 6 NAFYYSR---C--RYQPSPDEVAAS---CDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHI 77 (257)
Q Consensus 6 ~~~~~~G---a--~~~~s~~ea~~~---advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~ 77 (257)
+.+.+.| . +.+.|+.|+++. +|+||+|||+++++++++ +++.+.+.+|++|||+||+.|..++++++.+
T Consensus 41 ~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~vl---~~l~~~L~~g~iIId~st~~~~~t~~~~~~l 117 (484)
T 4gwg_A 41 DDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQAVDDFI---EKLVPLLDTGDIIIDGGNSEYRDTTRRCRDL 117 (484)
T ss_dssp HHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHHHHHHH---HHHGGGCCTTCEEEECSCCCHHHHHHHHHHH
T ss_pred HHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHHHHHHH---HHHHHhcCCCCEEEEcCCCCchHHHHHHHHH
Confidence 4465543 2 347999999984 999999999999999998 6788889999999999999999999999999
Q ss_pred HHcCCcEEEecCCCChHHhhcCceEEEecCChhHHHHHHHHHHHhcCCc-------eecCCCchHHHHHHHHHHHHHHHH
Q 025140 78 KATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSR-------FYLGDVGNGAAMKLVVNMIMGSMM 150 (257)
Q Consensus 78 ~~~G~~~vdapV~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~-------~~~G~~G~a~~~Kl~~n~~~~~~~ 150 (257)
+++|++|+|+||+|++.+++.|. .+|+||+++++++++|+|+.++.++ +|+|+.|+|+.+||++|.+.++++
T Consensus 118 ~~~Gi~fvd~pVsGg~~gA~~G~-~im~GG~~ea~~~v~pll~~ig~~v~~~~~~~~~~G~~Gag~~vKmv~N~i~~~~m 196 (484)
T 4gwg_A 118 KAKGILFVGSGVSGGEEGARYGP-SLMPGGNKEAWPHIKTIFQGIAAKVGTGEPCCDWVGDEGAGHFVKMVHNGIEYGDM 196 (484)
T ss_dssp HHTTCEEEEEEEESHHHHHHHCC-EEEEEECGGGHHHHHHHHHHHSCBCTTSCBSBCCCEETTHHHHHHHHHHHHHHHHH
T ss_pred HhhccccccCCccCCHHHHhcCC-eeecCCCHHHHHHHHHHHHHhcCcccCCCceEEEECCccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999 9999999999999999999999887 899999999999999999999999
Q ss_pred HHHHHHHHHHHH-cCCCHHHHHHHH---hhcCCCchhhhccccccccCCCCCCCchhhHH-----HHH-HHHHHHHHhcC
Q 025140 151 ATFSEGLLHSEK-VGLDPNVLVEVV---SQGAISAPMYSLKGPSMIESLYPTAFPLKHQQ-----KDL-RLALGLAESVS 220 (257)
Q Consensus 151 ~~~~Ea~~la~~-~Gld~~~~~~~l---~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~~-----KD~-~~~~~~a~~~g 220 (257)
++++|++.++++ .|+|++.+.+++ +.+.+.||+++.+.+.+..+|+..++.++... |+. +...+.+.+.|
T Consensus 197 ~~iaEa~~l~~~~~Gld~~~l~~v~~~w~~G~~~S~l~e~~~~~l~~~D~~g~~~ld~i~d~~~~kgtG~wt~~~A~~~g 276 (484)
T 4gwg_A 197 QLICEAYHLMKDVLGMAQDEMAQAFEDWNKTELDSFLIEITANILKFQDTDGKHLLPKIRDSAGQKGTGKWTAISALEYG 276 (484)
T ss_dssp HHHHHHHHHHHHTSCCCHHHHHHHHHHHTTTTTCBHHHHHHHHHHHCBCTTSSBSGGGSCCCCCSSCTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHcCCCccchHHHHHHHHHhcCCccCCccHHHHhccccCcchHHHHHHHHHHcC
Confidence 999999999999 999999998887 57778999999999988888877556666543 333 34567888999
Q ss_pred CCcHHH-HHHHHHHHHH
Q 025140 221 QSTPIA-AAANELYKVA 236 (257)
Q Consensus 221 ~~~p~~-~~~~~~~~~a 236 (257)
+|+|++ +++...|...
T Consensus 277 vp~p~i~~av~~R~~S~ 293 (484)
T 4gwg_A 277 VPVTLIGEAVFARCLSS 293 (484)
T ss_dssp CCCHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHhh
Confidence 999954 4556666443
No 21
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-32 Score=252.34 Aligned_cols=224 Identities=13% Similarity=0.119 Sum_probs=203.6
Q ss_pred hhhhh-----cCccccCCHHHHHhc---CCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHH
Q 025140 6 NAFYY-----SRCRYQPSPDEVAAS---CDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHI 77 (257)
Q Consensus 6 ~~~~~-----~Ga~~~~s~~ea~~~---advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~ 77 (257)
+.+.+ .|++.+.|+.|++++ +|+||+|||++.++++|+ +++.+.+.+|++|||+||+.|..++++++.+
T Consensus 47 ~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~vl---~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l 123 (497)
T 2p4q_A 47 DHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAPVDALI---NQIVPLLEKGDIIIDGGNSHFPDSNRRYEEL 123 (497)
T ss_dssp HHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSSHHHHHHH---HHHGGGCCTTCEEEECSCCCHHHHHHHHHHH
T ss_pred HHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCChHHHHHHH---HHHHHhCCCCCEEEECCCCChhHHHHHHHHH
Confidence 44665 588899999999987 999999999999999999 6788888899999999999999999999999
Q ss_pred HHcCCcEEEecCCCChHHhhcCceEEEecCChhHHHHHHHHHHHhcCC------ceecCCCchHHHHHHHHHHHHHHHHH
Q 025140 78 KATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKS------RFYLGDVGNGAAMKLVVNMIMGSMMA 151 (257)
Q Consensus 78 ~~~G~~~vdapV~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~------~~~~G~~G~a~~~Kl~~n~~~~~~~~ 151 (257)
.++|++|+|+||+|+|..+..|+ .+|+||+++++++++++|+.++.+ ++|+|+.|.|+.+|+++|.+.+..+.
T Consensus 124 ~~~g~~~v~~pVsgg~~~a~~G~-~im~gg~~e~~~~v~~ll~~~g~~~dGe~~v~~vg~~G~g~~~Kl~~N~~~~~~~~ 202 (497)
T 2p4q_A 124 KKKGILFVGSGVSGGEEGARYGP-SLMPGGSEEAWPHIKNIFQSISAKSDGEPCCEWVGPAGAGHYVKMVHNGIEYGDMQ 202 (497)
T ss_dssp HHTTCEEEEEEEESHHHHHHHCC-EEEEEECGGGHHHHHHHHHHHSCEETTEESCCCCEETTHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCceeCCCcccChhHhhcCC-eEEecCCHHHHHHHHHHHHHhcCccCCCCceEEECCccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999 899999999999999999999988 78999999999999999999999999
Q ss_pred HHHHHHHHHHH-cCCCHHHHHHHHh---hcCCCchhhhccccccccCCCCCCCchhhHH-----HHHH-HHHHHHHhcCC
Q 025140 152 TFSEGLLHSEK-VGLDPNVLVEVVS---QGAISAPMYSLKGPSMIESLYPTAFPLKHQQ-----KDLR-LALGLAESVSQ 221 (257)
Q Consensus 152 ~~~Ea~~la~~-~Gld~~~~~~~l~---~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~~-----KD~~-~~~~~a~~~g~ 221 (257)
+++|++.++++ .|++++.+.+++. .+...|++++.+.+.+..+||+++|.++.+. ||+. .+.+.+++.|+
T Consensus 203 ~laEa~~l~~~~lGl~~~~~~~~~~~w~~g~~~S~l~~~~~~~l~~~d~~~~~~vd~i~D~~~~KgtG~~~~~~A~~~Gv 282 (497)
T 2p4q_A 203 LICEAYDIMKRLGGFTDKEISDVFAKWNNGVLDSFLVEITRDILKFDDVDGKPLVEKIMDTAGQKGTGKWTAINALDLGM 282 (497)
T ss_dssp HHHHHHHHHHHTTCCCHHHHHHHHHHHHTTTTCBHHHHHHHHHHTCBCTTSSBGGGGSCCCCCCCSHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHccCCCHHHHHHHHHHhcCCccccHHHHHHHHHHhcCCCCCccHHHHHHHhhccchHHHHHHHHHHHcCC
Confidence 99999999999 5999999999984 5668899999888888888996678998888 8876 68999999999
Q ss_pred CcHHHHHHH-HHH
Q 025140 222 STPIAAAAN-ELY 233 (257)
Q Consensus 222 ~~p~~~~~~-~~~ 233 (257)
++|++..+. +.+
T Consensus 283 ~~P~~~~av~ar~ 295 (497)
T 2p4q_A 283 PVTLIGEAVFARC 295 (497)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CCchHHHHHHHHH
Confidence 999998853 444
No 22
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=99.97 E-value=1.2e-30 Score=239.08 Aligned_cols=211 Identities=13% Similarity=0.103 Sum_probs=185.5
Q ss_pred ccccCCHHHHHhcCCEEEEecCChH----------HHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCC
Q 025140 13 CRYQPSPDEVAASCDVTFAMLADPE----------SAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGA 82 (257)
Q Consensus 13 a~~~~s~~ea~~~advvi~~l~~~~----------~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~ 82 (257)
.+++++++|++++||+||+|||++. .+++++ +++.+.+.+|++||++||++|++++++.+.+++.+.
T Consensus 72 l~~ttd~~ea~~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~---~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e~~~ 148 (446)
T 4a7p_A 72 LSFTTDLAEGVKDADAVFIAVGTPSRRGDGHADLSYVFAAA---REIAENLTKPSVIVTKSTVPVGTGDEVERIIAEVAP 148 (446)
T ss_dssp EEEESCHHHHHTTCSEEEECCCCCBCTTTCCBCTHHHHHHH---HHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHHHST
T ss_pred EEEECCHHHHHhcCCEEEEEcCCCCccccCCccHHHHHHHH---HHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhCC
Confidence 5788999999999999999999985 689998 688888999999999999999999999999998876
Q ss_pred cEEEecCCCChHHhhcCce--------EEEecCC-hhHHHHHHHHHHHhcCC---ceecCCCchHHHHHHHHHHHHHHHH
Q 025140 83 SFLEAPVSGSKKPAEDGQL--------IFLAAGD-KSLYNTVAPLLDIMGKS---RFYLGDVGNGAAMKLVVNMIMGSMM 150 (257)
Q Consensus 83 ~~vdapV~g~~~~a~~g~l--------~i~~gg~-~~~~~~~~~ll~~~~~~---~~~~G~~G~a~~~Kl~~n~~~~~~~ 150 (257)
. .|++|.++|+.+++|++ .+++|++ ++++++++++|+.+.++ +++++++++|+.+|+++|.+.+.++
T Consensus 149 ~-~d~~v~~~Pe~a~eG~a~~d~~~p~~ivvG~~~~~~~~~~~~ly~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~i 227 (446)
T 4a7p_A 149 N-SGAKVVSNPEFLREGAAIEDFKRPDRVVVGTEDEFARQVMREIYRPLSLNQSAPVLFTGRRTSELIKYAANAFLAVKI 227 (446)
T ss_dssp T-SCCEEEECCCCCCTTSHHHHHHSCSCEEEECSCHHHHHHHHHHHCSCC-----CEEEECHHHHHHHHHHHHHHHHHHH
T ss_pred C-CCceEEeCcccccccchhhhccCCCEEEEeCCcHHHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHHHHH
Confidence 6 78999999999999986 7899986 78999999999999875 6889999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHhhcCCCchhhhccccccccCCCCCCCchhhHHHHHHHHHHHHHhcCCCcHHHHHHH
Q 025140 151 ATFSEGLLHSEKVGLDPNVLVEVVSQGAISAPMYSLKGPSMIESLYPTAFPLKHQQKDLRLALGLAESVSQSTPIAAAAN 230 (257)
Q Consensus 151 ~~~~Ea~~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~g~~~p~~~~~~ 230 (257)
++++|+..+|++.|+|++.++++++.++-. .+.++ ...++|...|+.||+.++.+.+++.|+++|+++++.
T Consensus 228 a~~nE~~~l~~~~GiD~~~v~~~~~~~~ri-------g~~~l--~pg~G~gg~c~~KD~~~l~~~A~~~g~~~~l~~~~~ 298 (446)
T 4a7p_A 228 TFINEIADLCEQVGADVQEVSRGIGMDNRI-------GGKFL--HAGPGYGGSCFPKDTLALMKTAADNETPLRIVEATV 298 (446)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHTSTTC----------CC--CCCSCCCTTTHHHHHHHHHHHHHHTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHhcCCCC-------CCccC--CCCCCcchhhHHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 999999999999999999999999986311 11222 123578999999999999999999999999999999
Q ss_pred HHHHHH
Q 025140 231 ELYKVA 236 (257)
Q Consensus 231 ~~~~~a 236 (257)
++.+.-
T Consensus 299 ~iN~~~ 304 (446)
T 4a7p_A 299 QVNDAR 304 (446)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 987654
No 23
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.97 E-value=2.8e-30 Score=239.07 Aligned_cols=220 Identities=17% Similarity=0.175 Sum_probs=198.1
Q ss_pred hhhhhc----CccccCCHHHHHhc---CCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHH
Q 025140 6 NAFYYS----RCRYQPSPDEVAAS---CDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIK 78 (257)
Q Consensus 6 ~~~~~~----Ga~~~~s~~ea~~~---advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~ 78 (257)
+.+.+. |++.+.|+.|++++ +|+||+|||++.++++|+ +++.+.+.+|++|||+||+.|..++++.+.+.
T Consensus 52 ~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~vl---~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~ 128 (480)
T 2zyd_A 52 EEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGTDAAI---DSLKPYLDKGDIIIDGGNTFFQDTIRRNRELS 128 (480)
T ss_dssp HHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSSSHHHHHH---HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHH
T ss_pred HHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCHHHHHHHH---HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHH
Confidence 445554 88899999999987 999999999999999999 67888888999999999999999999999999
Q ss_pred HcCCcEEEecCCCChHHhhcCceEEEecCChhHHHHHHHHHHHhcCC-------ceecCCCchHHHHHHHHHHHHHHHHH
Q 025140 79 ATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKS-------RFYLGDVGNGAAMKLVVNMIMGSMMA 151 (257)
Q Consensus 79 ~~G~~~vdapV~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~-------~~~~G~~G~a~~~Kl~~n~~~~~~~~ 151 (257)
++|++|+++||+|+|..+..|. .+|+||+++.+++++++|+.++.+ +.++|+.|.|+.+|+++|.+.+..+.
T Consensus 129 ~~g~~~v~~pv~gg~~~a~~g~-~i~~gg~~~~~~~v~~ll~~~g~~~~dGe~~v~~~g~~G~g~~~Kl~~N~~~~~~~~ 207 (480)
T 2zyd_A 129 AEGFNFIGTGVSGGEEGALKGP-SIMPGGQKEAYELVAPILTKIAAVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQ 207 (480)
T ss_dssp HTTCEEEEEEEESHHHHHHHCC-EEEEESCHHHHHHHHHHHHHHSCBCTTSCBSBCCCBSTTHHHHHHHHHHHHHHHHHH
T ss_pred HCCCCeeCCccccCHhHHhcCC-eEEecCCHHHHHHHHHHHHHHhccccCCCceEEEECCccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 899999999999999999999988 78999999999999999999999999
Q ss_pred HHHHHHHHHHH-cCCCHHHHHHHH---hhcCCCchhhhccccccccCCCCCCCchhhHH-----HHH-HHHHHHHHhcCC
Q 025140 152 TFSEGLLHSEK-VGLDPNVLVEVV---SQGAISAPMYSLKGPSMIESLYPTAFPLKHQQ-----KDL-RLALGLAESVSQ 221 (257)
Q Consensus 152 ~~~Ea~~la~~-~Gld~~~~~~~l---~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~~-----KD~-~~~~~~a~~~g~ 221 (257)
+++|++.++++ .|++++.+.+++ +.+...|++++.+.+.+.++||.++|.++... ||. ..+.+.+++.|+
T Consensus 208 ~laEa~~l~~~~lGl~~~~~~~l~~~w~~g~~~s~l~~~~~~~l~~~d~~~~~~v~~i~D~~~~k~tG~~~~~~A~~~gv 287 (480)
T 2zyd_A 208 LIAEAYSLLKGGLNLTNEELAQTFTEWNNGELSSYLIDITKDIFTKKDEDGNYLVDVILDEAANKGTGKWTSQSALDLGE 287 (480)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHHHHHHTTTCBHHHHHHHHHHHCBCTTSSBGGGGBCCCCCCCSCTTHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHhcCCCcccHHHHHHHHHHhcCCCCCcchHHHHHHHhcCchHHHHHHHHHHHcCC
Confidence 99999999999 699999999988 45667889888888877788886678888665 444 478899999999
Q ss_pred CcHHHHHH
Q 025140 222 STPIAAAA 229 (257)
Q Consensus 222 ~~p~~~~~ 229 (257)
++|+++.+
T Consensus 288 ~~Pi~~~a 295 (480)
T 2zyd_A 288 PLSLITES 295 (480)
T ss_dssp CCHHHHHH
T ss_pred CCchHHHH
Confidence 99999885
No 24
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=99.96 E-value=1.4e-29 Score=233.28 Aligned_cols=216 Identities=12% Similarity=-0.009 Sum_probs=180.1
Q ss_pred cCccccCCHHHHHhcCCEEEEecCChH--------HHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHH--Hc
Q 025140 11 SRCRYQPSPDEVAASCDVTFAMLADPE--------SAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIK--AT 80 (257)
Q Consensus 11 ~Ga~~~~s~~ea~~~advvi~~l~~~~--------~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~--~~ 80 (257)
.|...+.+..+++++||+||+|||++. ++..|....+++.+.+.+|++||++||++|.+++++++.+. +.
T Consensus 87 ~g~l~~ttd~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~~ile~~~ 166 (478)
T 3g79_A 87 AGKFECTPDFSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAKQILEEES 166 (478)
T ss_dssp TTCEEEESCGGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHHHHHHHHH
T ss_pred cCCeEEeCcHHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHHHHHHHhc
Confidence 454333333789999999999999973 44444433378888899999999999999999999997553 35
Q ss_pred CC------cEEEecCCCChHHhhcCce---EEEecCChhHHHHHHHHHHHh-cCCceecCCCchHHHHHHHHHHHHHHHH
Q 025140 81 GA------SFLEAPVSGSKKPAEDGQL---IFLAAGDKSLYNTVAPLLDIM-GKSRFYLGDVGNGAAMKLVVNMIMGSMM 150 (257)
Q Consensus 81 G~------~~vdapV~g~~~~a~~g~l---~i~~gg~~~~~~~~~~ll~~~-~~~~~~~G~~G~a~~~Kl~~n~~~~~~~ 150 (257)
|. .++++|++..+..+..+.+ .+++|++++.+++++++|+.+ +.+++++|++++|+.+|+++|.+.+.++
T Consensus 167 g~~~~~d~~v~~~Pe~~~~G~a~~~~~~~~~Iv~G~~~~~~~~~~~ly~~~~~~~~~~~~~~~~aE~~Kl~~N~~~a~~I 246 (478)
T 3g79_A 167 GLKAGEDFALAHAPERVMVGRLLKNIREHDRIVGGIDEASTKRAVELYSPVLTVGQVIPMSATAAEVTKTAENTFRDLQI 246 (478)
T ss_dssp CCCBTTTBEEEECCCCCCTTSHHHHHHHSCEEEEESSHHHHHHHHHHHGGGCSSCCEEEEEHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCceeEEeCCccCCccchhhhhcCCcEEEEeCCHHHHHHHHHHHhhhccCCeEEeCCHHHHHHHHHHHHHHHHHHH
Confidence 63 6899999998888766655 788999999999999999999 7889999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHhhcCCCchhhhccccccccCCCCCC--CchhhHHHHHHHHHHHHHhcCCC------
Q 025140 151 ATFSEGLLHSEKVGLDPNVLVEVVSQGAISAPMYSLKGPSMIESLYPTA--FPLKHQQKDLRLALGLAESVSQS------ 222 (257)
Q Consensus 151 ~~~~Ea~~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~--f~~~~~~KD~~~~~~~a~~~g~~------ 222 (257)
++++|++.+|++.|+|++.++++++..+ ++ ++....|.|+ |...|+.||+.++.+.+++.|++
T Consensus 247 a~~nE~~~l~e~~GiD~~~v~~~~~~~~----~~-----ri~~~~~~PG~G~GG~c~~KD~~~l~~~a~~~g~~~~~~~~ 317 (478)
T 3g79_A 247 AAINQLALYCEAMGINVYDVRTGVDSLK----GE-----GITRAVLWPGAGVGGHCLTKDTYHLERGVKIGRGELDYPEG 317 (478)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHTSC----CS-----SSCCCCCCCCSCCCSSHHHHHHHHHHHHHTTSSCCCCCCSS
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHCCCc----hh-----hhccccCCCCCCcchhhHHHHHHHHHHHHHHcCCCcccccc
Confidence 9999999999999999999999998753 21 3334556665 46789999999999999999987
Q ss_pred -cHHHHHHHHHHHH
Q 025140 223 -TPIAAAANELYKV 235 (257)
Q Consensus 223 -~p~~~~~~~~~~~ 235 (257)
+++++++.++.+.
T Consensus 318 ~~~li~~~~~iN~~ 331 (478)
T 3g79_A 318 ADSIYVLARKVNDF 331 (478)
T ss_dssp CCCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHH
Confidence 8999988886554
No 25
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.96 E-value=1.9e-29 Score=216.25 Aligned_cols=220 Identities=16% Similarity=0.205 Sum_probs=185.9
Q ss_pred hhhhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEE
Q 025140 6 NAFYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 6 ~~~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~v 85 (257)
+.+.+.|++ +++.|+++++|+||+|+|++..++.+. ++.+.+.+ +|||+||+.|.+.+++++.+.++| |+
T Consensus 39 ~~~~~~g~~--~~~~~~~~~aDvvi~~v~~~~~~~~~~----~~~~~~~~--~vi~~s~~~~~~~~~l~~~~~~~g--~~ 108 (264)
T 1i36_A 39 ERARTVGVT--ETSEEDVYSCPVVISAVTPGVALGAAR----RAGRHVRG--IYVDINNISPETVRMASSLIEKGG--FV 108 (264)
T ss_dssp HHHHHHTCE--ECCHHHHHTSSEEEECSCGGGHHHHHH----HHHTTCCS--EEEECSCCCHHHHHHHHHHCSSSE--EE
T ss_pred HHHHHCCCc--CCHHHHHhcCCEEEEECCCHHHHHHHH----HHHHhcCc--EEEEccCCCHHHHHHHHHHHhhCC--ee
Confidence 456666877 888999999999999999988777653 45555544 999999999999999999998777 99
Q ss_pred EecCCCChHHhhcCceEEEecCChhHHHHHHHHHHHhcCCceecCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 025140 86 EAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGD-VGNGAAMKLVVNMIMGSMMATFSEGLLHSEKVG 164 (257)
Q Consensus 86 dapV~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~~G~-~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~G 164 (257)
|+||+++|..+..|.+ +++||+.+ +++++ |+.+|.+++++++ +|.+..+|+++|.+...++.+++|++.++++.|
T Consensus 109 ~~~v~~~~~~~~~g~~-~~~~g~~~--~~~~~-l~~~g~~~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~la~~~G 184 (264)
T 1i36_A 109 DAAIMGSVRRKGADIR-IIASGRDA--EEFMK-LNRYGLNIEVRGREPGDASAIKMLRSSYTKGVSALLWETLTAAHRLG 184 (264)
T ss_dssp EEEECSCHHHHGGGCE-EEEESTTH--HHHHG-GGGGTCEEEECSSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eeeeeCCccccccCCe-EEecCCcH--HHhhh-HHHcCCeeEECCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999998 89999876 88999 9999998899998 899999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcCCCchhhhccccccccCCCCCCCchhhHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHCCCCCc
Q 025140 165 LDPNVLVEVVSQGAISAPMYSLKGPSMIESLYPTAFPLKHQQKDLRLALGLAESVSQSTPIAAAANELYKVAKSHGLSDE 244 (257)
Q Consensus 165 ld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g~g~~ 244 (257)
+|.+ .++.+..+.+.++. .+.+.+..+++.++|+ ..||++.+.+++++. +++|+.+.+.+.|+++.+.|++.+
T Consensus 185 ~~~~-~~~~~~~~~g~~~~--~~~~~~~~~~~~~g~~---~~~~~~~~~~~a~~~-v~~p~~~~v~~~~~~~~~~~~~~~ 257 (264)
T 1i36_A 185 LEED-VLEMLEYTEGNDFR--ESAISRLKSSCIHARR---RYEEMKEVQDMLAEV-IDPVMPTCIIRIFDKLKDVKVSAD 257 (264)
T ss_dssp CHHH-HHHHHHTTSCSSTH--HHHHHHHHHHHHTHHH---HHHHHHHHHHHHHTT-SCCSHHHHHHHHHHHHCC------
T ss_pred CcHH-HHHHHHHhcCccHH--HHHHHHhcCCCCcchh---hHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHcCCChh
Confidence 9987 77998876544443 2456677778877776 689999999999999 999999999999999999888776
Q ss_pred ch
Q 025140 245 DF 246 (257)
Q Consensus 245 d~ 246 (257)
|-
T Consensus 258 ~~ 259 (264)
T 1i36_A 258 AR 259 (264)
T ss_dssp GG
T ss_pred hH
Confidence 63
No 26
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=99.96 E-value=3.1e-29 Score=230.35 Aligned_cols=211 Identities=15% Similarity=0.186 Sum_probs=185.1
Q ss_pred CccccCCHHHHHhcCCEEEEecCChH---------HHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCC
Q 025140 12 RCRYQPSPDEVAASCDVTFAMLADPE---------SAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGA 82 (257)
Q Consensus 12 Ga~~~~s~~ea~~~advvi~~l~~~~---------~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~ 82 (257)
+.++++++.+++++||+||+|||++. .+++++ +++.+.+.+|++||++||++|++++++.+.+++++.
T Consensus 65 ~l~~t~d~~ea~~~aDvViiaVptp~~~~~~~dl~~v~~v~---~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~~~~ 141 (450)
T 3gg2_A 65 RLRFGTEIEQAVPEADIIFIAVGTPAGEDGSADMSYVLDAA---RSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQEELD 141 (450)
T ss_dssp SEEEESCHHHHGGGCSEEEECCCCCBCTTSSBCCHHHHHHH---HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHH
T ss_pred cEEEECCHHHHHhcCCEEEEEcCCCcccCCCcChHHHHHHH---HHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHHhcc
Confidence 35778999999999999999999985 788888 678888899999999999999999999999988654
Q ss_pred c---EEEecCCCChHHhhcCce--------EEEecC-ChhHHHHHHHHHHHhcC--CceecCCCchHHHHHHHHHHHHHH
Q 025140 83 S---FLEAPVSGSKKPAEDGQL--------IFLAAG-DKSLYNTVAPLLDIMGK--SRFYLGDVGNGAAMKLVVNMIMGS 148 (257)
Q Consensus 83 ~---~vdapV~g~~~~a~~g~l--------~i~~gg-~~~~~~~~~~ll~~~~~--~~~~~G~~G~a~~~Kl~~n~~~~~ 148 (257)
. .+|++|.++|+.+.+|.+ .+++|| +++++++++++|+.+.+ .++++++++.|+.+|+++|.+.+.
T Consensus 142 ~~~~~~d~~v~~~Pe~a~eG~~~~~~~~p~~ivvG~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~ 221 (450)
T 3gg2_A 142 KREVLIDFDIASNPEFLKEGNAIDDFMKPDRVVVGVDSDRARELITSLYKPMLLNNFRVLFMDIASAEMTKYAANAMLAT 221 (450)
T ss_dssp HTTCCCCEEEEECCCCCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHHTTTCCSCCCEEEECHHHHHHHHHHHHHHHHH
T ss_pred ccCcCcceeEEechhhhcccchhhhccCCCEEEEEcCCHHHHHHHHHHHHHHhcCCCeEEecCHHHHHHHHHHHHHHHHH
Confidence 3 378999999999999887 688887 57899999999999987 367889999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHhhcCCCchhhhccccccccCCCCC--CCchhhHHHHHHHHHHHHHhcCCCcHHH
Q 025140 149 MMATFSEGLLHSEKVGLDPNVLVEVVSQGAISAPMYSLKGPSMIESLYPT--AFPLKHQQKDLRLALGLAESVSQSTPIA 226 (257)
Q Consensus 149 ~~~~~~Ea~~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~--~f~~~~~~KD~~~~~~~a~~~g~~~p~~ 226 (257)
++++++|+..+|++.|+|++.+.++++.++ ++....|.| +|...|+.||+.++.+.+++.|+++|++
T Consensus 222 ~ia~~nE~~~l~~~~Gid~~~v~~~~~~~~-----------rig~~~~~pg~G~gg~c~~KD~~~l~~~a~~~g~~~~l~ 290 (450)
T 3gg2_A 222 RISFMNDVANLCERVGADVSMVRLGIGSDS-----------RIGSKFLYPGCGYGGSCFPKDVKALIRTAEDNGYRMEVL 290 (450)
T ss_dssp HHHHHHHHHHHHHHHTCCHHHHHHHHHTST-----------TTCSSSCCCSSCCCSSHHHHHHHHHHHHHHHTTCCCHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHcCCC-----------CCCcccCCCCCCCCcccHHhhHHHHHHHHHHcCCCcHHH
Confidence 999999999999999999999999999852 122223334 5899999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 025140 227 AAANELYKVA 236 (257)
Q Consensus 227 ~~~~~~~~~a 236 (257)
+++.++.+.-
T Consensus 291 ~~~~~iN~~~ 300 (450)
T 3gg2_A 291 EAVERVNEKQ 300 (450)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999987654
No 27
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.96 E-value=3.1e-28 Score=225.74 Aligned_cols=222 Identities=14% Similarity=0.121 Sum_probs=197.1
Q ss_pred cCccccCCHHHHHh---cCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEe
Q 025140 11 SRCRYQPSPDEVAA---SCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEA 87 (257)
Q Consensus 11 ~Ga~~~~s~~ea~~---~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vda 87 (257)
.|.+.+.|+.|+++ ++|+||+|||++.++++++ +++.+.+.+|++|||+||..|..++++.+.+.++|++|+++
T Consensus 49 ~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~vl---~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~ 125 (482)
T 2pgd_A 49 TKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDNFI---EKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGS 125 (482)
T ss_dssp SSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHHHH---HHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCeEEeCCHHHHHhhccCCCEEEEeCCChHHHHHHH---HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeCC
Confidence 67888999999985 8999999999998999998 56777788999999999999999999999998889999999
Q ss_pred cCCCChHHhhcCceEEEecCChhHHHHHHHHHHHhcCCc-------eecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025140 88 PVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSR-------FYLGDVGNGAAMKLVVNMIMGSMMATFSEGLLHS 160 (257)
Q Consensus 88 pV~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~-------~~~G~~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la 160 (257)
||++++..+..|. .+|+||+++.+++++++|+.++.++ +++|+.|.|+.+|+++|.+.+..+.+++|++.++
T Consensus 126 pv~g~~~~a~~g~-~i~~gg~~e~~~~v~~ll~~~g~~v~d~~~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~i~Ea~~l~ 204 (482)
T 2pgd_A 126 GVSGGEDGARYGP-SLMPGGNKEAWPHIKAIFQGIAAKVGTGEPCCDWVGDDGAGHFVKMVHNGIEYGDMQLICEAYHLM 204 (482)
T ss_dssp EEESHHHHHHHCC-EEEEEECTTTHHHHHHHHHHHSCBCTTSCBSCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCChhhhccCC-eEEeCCCHHHHHHHHHHHHHhhhhccCCCcceEEECCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999 7899999999999999999999876 7889999999999999999999999999999999
Q ss_pred HHc-CCCHHHHHHHHh---hcCCCchhhhccccccccCCCCCCCchhhH------HHHHHHHHHHHHhcCCCcHHHH-HH
Q 025140 161 EKV-GLDPNVLVEVVS---QGAISAPMYSLKGPSMIESLYPTAFPLKHQ------QKDLRLALGLAESVSQSTPIAA-AA 229 (257)
Q Consensus 161 ~~~-Gld~~~~~~~l~---~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~------~KD~~~~~~~a~~~g~~~p~~~-~~ 229 (257)
++. |++++.+.+++. .+...|+..+...+.+..++|.++|.++.. .++.+.+.+.+++.|+|+|++. .+
T Consensus 205 ~~~~G~~~~~~~~~~~~w~~g~~~S~l~~~~~~~l~~~d~~~~~~ld~i~d~~~~k~t~~~~~~~A~~~Gv~~P~i~~av 284 (482)
T 2pgd_A 205 KDVLGLGHKEMAKAFEEWNKTELDSFLIEITASILKFQDADGKHLLPKIRDSAGQKGTGKWTAISALEYGVPVTLIGEAV 284 (482)
T ss_dssp HHTSCCCHHHHHHHHHHHTTTTTCBHHHHHHHHHHHCBCTTSSBSGGGSCCCCCCCSHHHHHHHHHHHHTCCCHHHHHHH
T ss_pred HhcCCcCHHHHHHHHHHhcCCCcCchHHHHHhHHhhccCCCCCeeecccccccccccHHHHHHHHHHHcCCCcchHHHHH
Confidence 999 999999999985 455678888877777778888777877765 4677889999999999999995 56
Q ss_pred HHHHHHH
Q 025140 230 NELYKVA 236 (257)
Q Consensus 230 ~~~~~~a 236 (257)
.+.+...
T Consensus 285 ~~~~~s~ 291 (482)
T 2pgd_A 285 FARCLSS 291 (482)
T ss_dssp HHHHHHH
T ss_pred HHHhhhh
Confidence 6666433
No 28
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.96 E-value=3.8e-28 Score=224.75 Aligned_cols=220 Identities=16% Similarity=0.222 Sum_probs=195.5
Q ss_pred hhhhhc----CccccCCHHHHHhc---CCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHH
Q 025140 6 NAFYYS----RCRYQPSPDEVAAS---CDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIK 78 (257)
Q Consensus 6 ~~~~~~----Ga~~~~s~~ea~~~---advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~ 78 (257)
+.+.+. |.+.+.|+.|++++ +|+||+|||++.++++++ +++.+.+.+|++|||+||..|..++++.+.+.
T Consensus 42 ~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~vl---~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~ 118 (474)
T 2iz1_A 42 EEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDATI---KSLLPLLDIGDILIDGGNTHFPDTMRRNAELA 118 (474)
T ss_dssp HHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHHHH---HHHGGGCCTTCEEEECSCCCHHHHHHHHHHTT
T ss_pred HHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHHHHHH---HHHHhhCCCCCEEEECCCCCHHHHHHHHHHHH
Confidence 345554 78889999999987 999999999999999998 57777888999999999999999999998888
Q ss_pred HcCCcEEEecCCCChHHhhcCceEEEecCChhHHHHHHHHHHHhcCC--------ceecCCCchHHHHHHHHHHHHHHHH
Q 025140 79 ATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKS--------RFYLGDVGNGAAMKLVVNMIMGSMM 150 (257)
Q Consensus 79 ~~G~~~vdapV~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~--------~~~~G~~G~a~~~Kl~~n~~~~~~~ 150 (257)
++|++|+++||+|++..+..|. .+|+||+++.+++++++|+.++.+ +.++|+.|.|+.+|+++|.+.+..+
T Consensus 119 ~~g~~~v~~pv~gg~~~a~~g~-~i~~gg~~~~~~~v~~ll~~~g~~~~~dge~~~~~~g~~g~g~~~Kl~~N~~~~~~~ 197 (474)
T 2iz1_A 119 DSGINFIGTGVSGGEKGALLGP-SMMPGGQKEAYDLVAPIFEQIAAKAPQDGKPCVAYMGANGAGHYVKMVHNGIEYGDM 197 (474)
T ss_dssp TSSCEEEEEEECSHHHHHHHCC-CEEEEECHHHHHHHHHHHHHHSCBCTTTCCBSBCCCBSTTHHHHHHHHHHHHHHHHH
T ss_pred HCCCeEECCCCCCChhhhccCC-eEEecCCHHHHHHHHHHHHHHhcccccCCCceEEEECCccHHHHHHHHHhHHHHHHH
Confidence 8899999999999999999999 788999999999999999999987 6889999999999999999999999
Q ss_pred HHHHHHHHHHHH-cCCCHHHHHHHHh---hcCCCchhhhccccccccCCCCCC-CchhhHH-----HHHH-HHHHHHHhc
Q 025140 151 ATFSEGLLHSEK-VGLDPNVLVEVVS---QGAISAPMYSLKGPSMIESLYPTA-FPLKHQQ-----KDLR-LALGLAESV 219 (257)
Q Consensus 151 ~~~~Ea~~la~~-~Gld~~~~~~~l~---~~~~~s~~~~~~~~~~~~~~~~~~-f~~~~~~-----KD~~-~~~~~a~~~ 219 (257)
.+++|++.++++ .|++++.+.+++. .+...|++++...+.+..+|+.++ |.++... ||.. ...+.+++.
T Consensus 198 ~~laEa~~l~~~~~Gl~~~~~~~l~~~w~~g~~~s~l~~~~~~~l~~~d~~~g~~~vd~i~D~~~~k~tG~~~~~~A~~~ 277 (474)
T 2iz1_A 198 QLIAESYDLLKRILGLSNAEIQAIFEEWNEGELDSYLIEITKEVLKRKDDEGEGYIVDKILDKAGNKGTGKWTSESALDL 277 (474)
T ss_dssp HHHHHHHHHHHHTSCCCHHHHHHHHHHHTTTTTCBHHHHHHHHHTTCBCSSSSSBGGGGBCSCCCCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHhcCCCccccHHHhhhhHhhcCCCCCChhHHHHHHHhhcccchHHHHHHHHHHc
Confidence 999999999999 7999999999885 355678888877777777888777 8887655 6666 678999999
Q ss_pred CCCcHHHHHH
Q 025140 220 SQSTPIAAAA 229 (257)
Q Consensus 220 g~~~p~~~~~ 229 (257)
|+|+|+++.+
T Consensus 278 gv~~P~~~~a 287 (474)
T 2iz1_A 278 GVPLPLITES 287 (474)
T ss_dssp TCCCHHHHHH
T ss_pred CCCCchHHHH
Confidence 9999999885
No 29
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.95 E-value=2.7e-27 Score=219.13 Aligned_cols=212 Identities=16% Similarity=0.189 Sum_probs=189.4
Q ss_pred ccccCCHHHHHhc---CCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEecC
Q 025140 13 CRYQPSPDEVAAS---CDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPV 89 (257)
Q Consensus 13 a~~~~s~~ea~~~---advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vdapV 89 (257)
.+.+.|+.|++++ +|+||+|||++.++++++ +++.+.+.+|++|||+|+..|..++++.+.+.++|++|+++||
T Consensus 53 i~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~vl---~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~~pv 129 (478)
T 1pgj_A 53 LKAFETMEAFAASLKKPRKALILVQAGAATDSTI---EQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMGI 129 (478)
T ss_dssp EEECSCHHHHHHHBCSSCEEEECCCCSHHHHHHH---HHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred eEEECCHHHHHhcccCCCEEEEecCChHHHHHHH---HHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEEeec
Confidence 6778999999985 999999999998999998 5677778899999999999999999999999888999999999
Q ss_pred CCChHHhhcCceEEEecCChhHHHHHHHHHHHhcCC-------ceecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025140 90 SGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKS-------RFYLGDVGNGAAMKLVVNMIMGSMMATFSEGLLHSEK 162 (257)
Q Consensus 90 ~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~-------~~~~G~~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~ 162 (257)
+|++..+..|. .+|+||+++.+++++++|+.++.+ ++++|+.|.|+.+|+++|.+.+..+.+++|++.++++
T Consensus 130 ~gg~~~a~~g~-~i~~gg~~~~~~~v~~ll~~~g~~~~dg~~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~ 208 (478)
T 1pgj_A 130 SGGEEGARKGP-AFFPGGTLSVWEEIRPIVEAAAAKADDGRPCVTMNGSGGAGSCVKMYHNSGEYAILQIWGEVFDILRA 208 (478)
T ss_dssp ESHHHHHHHCC-EEEEEECHHHHHHHHHHHHHHSCBCTTSCBSCCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHhcCC-eEeccCCHHHHHHHHHHHHHhcccccCCCeeEEEeCCchHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999 789999999999999999999987 7899999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHh----hcCCCchhhhccccccccCCCCCC-CchhhHH-----HHH-HHHHHHHHhcCCCcHHHHHH
Q 025140 163 VGLDPNVLVEVVS----QGAISAPMYSLKGPSMIESLYPTA-FPLKHQQ-----KDL-RLALGLAESVSQSTPIAAAA 229 (257)
Q Consensus 163 ~Gld~~~~~~~l~----~~~~~s~~~~~~~~~~~~~~~~~~-f~~~~~~-----KD~-~~~~~~a~~~g~~~p~~~~~ 229 (257)
.|++++.+.+++. .+...|+..+...+.+.++|+ ++ |.++.+. ||+ +.+.+.+++.|+|+|+++.+
T Consensus 209 ~G~~~~~~~~l~~~w~~~g~~~s~l~~~~~~~l~~~d~-~G~~~ld~i~D~~~~kgtg~~~~~~A~~~Gv~~Pi~~~a 285 (478)
T 1pgj_A 209 MGLNNDEVAAVLEDWKSKNFLKSYMLDISIAAARAKDK-DGSYLTEHVMDRIGSKGTGLWSAQEALEIGVPAPSLNMA 285 (478)
T ss_dssp TTCCHHHHHHHHHHHHHTSTTCBHHHHHHHHHHHCBCT-TSSBGGGGBCCCCCCCSHHHHHHHHHHHHTCCCHHHHHH
T ss_pred cCCCHHHHHHHHHHhccCCCcCchHHHhhchhhhcCCC-CChhHHHHHHHHhcCccHHHHHHHHHHHhCCCChHHHHH
Confidence 9999999999987 556778887777766666777 44 7777666 554 68999999999999999984
No 30
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=99.95 E-value=1.5e-26 Score=210.37 Aligned_cols=207 Identities=16% Similarity=0.127 Sum_probs=175.5
Q ss_pred CccccCCHHHHHhcCCEEEEecCCh----------HHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcC
Q 025140 12 RCRYQPSPDEVAASCDVTFAMLADP----------ESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATG 81 (257)
Q Consensus 12 Ga~~~~s~~ea~~~advvi~~l~~~----------~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G 81 (257)
+.+++.++.+++++||+||+|+|++ ..+++++ +++.+ +.+|++||++||++|.+++++.+.+.+.+
T Consensus 96 ~l~~ttd~~ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~---~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~~ 171 (432)
T 3pid_A 96 NFRATTDKHDAYRNADYVIIATPTDYDPKTNYFNTSTVEAVI---RDVTE-INPNAVMIIKSTIPVGFTRDIKERLGIDN 171 (432)
T ss_dssp CEEEESCHHHHHTTCSEEEECCCCEEETTTTEEECHHHHHHH---HHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCCC
T ss_pred CeEEEcCHHHHHhCCCEEEEeCCCccccccccccHHHHHHHH---HHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhcc
Confidence 5788899999999999999999997 3678887 67888 88999999999999999999999987765
Q ss_pred CcEEEecCCCChHHhhcCce---EEEecCChhHHHHHHHHHHH--hcCC-ceecCCCchHHHHHHHHHHHHHHHHHHHHH
Q 025140 82 ASFLEAPVSGSKKPAEDGQL---IFLAAGDKSLYNTVAPLLDI--MGKS-RFYLGDVGNGAAMKLVVNMIMGSMMATFSE 155 (257)
Q Consensus 82 ~~~vdapV~g~~~~a~~g~l---~i~~gg~~~~~~~~~~ll~~--~~~~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~~E 155 (257)
++.+|+++++..+..+.+ .+++||+.+.++++.++|.. ++.. .++++++++|+++|+++|.+.+.++++++|
T Consensus 172 --v~~sPe~~~~G~A~~~~l~p~rIvvG~~~~~~~~~~~ll~~~~~~~~~~v~~~~~~~AE~~Kl~~N~~~a~~Ia~~nE 249 (432)
T 3pid_A 172 --VIFSPEFLREGRALYDNLHPSRIVIGERSARAERFADLLKEGAIKQDIPTLFTDSTEAEAIKLFANTYLALRVAYFNE 249 (432)
T ss_dssp --EEECCCCCCTTSHHHHHHSCSCEEESSCSHHHHHHHHHHHHHCSSSSCCEEECCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --EeecCccCCcchhhhcccCCceEEecCCHHHHHHHHHHHHhhhccCCCeEEecCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 456999999999999988 89999999999999999987 4433 467788999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHHHHHhhcCCCchhhhccccccccCCCCCCCchhhHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q 025140 156 GLLHSEKVGLDPNVLVEVVSQGAISAPMYSLKGPSMIESLYPTAFPLKHQQKDLRLALGLAESVSQSTPIAAAANELYKV 235 (257)
Q Consensus 156 a~~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~~ 235 (257)
+..+|++.|+|+++++++++..+- ..+.++.. .+||...|+.||...... +..|++.++++++.++-+.
T Consensus 250 l~~lae~~GiD~~~v~~~~~~dpr-------ig~~~~~p--g~G~GG~C~pkD~~~L~~--~~~~~~~~li~~~~~~N~~ 318 (432)
T 3pid_A 250 LDSYAESQGLNSKQIIEGVCLDPR-------IGNHYNNP--SFGYGGYCLPKDTKQLLA--NYESVPNNIIAAIVDANRT 318 (432)
T ss_dssp HHHHHHHTTCCHHHHHHHHHTSTT-------TCSSSCCC--CSCCCTTTHHHHHHHHHH--HTTTSCCSHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHccCCC-------CCcccCCC--CCCCcccchhhhHHHHHH--HhcCCchhHHHHHHHHHHh
Confidence 999999999999999999987531 11222211 236788999999988764 3468999999999887554
No 31
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=99.94 E-value=2.4e-27 Score=215.82 Aligned_cols=198 Identities=10% Similarity=0.038 Sum_probs=157.6
Q ss_pred HhcCCEEEEecCChHH--------HHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHH-cCC------cEEEe
Q 025140 23 AASCDVTFAMLADPES--------AMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKA-TGA------SFLEA 87 (257)
Q Consensus 23 ~~~advvi~~l~~~~~--------v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~-~G~------~~vda 87 (257)
+++||+||+|||++.. ++.|..+.+++.+.+.+|++||++||++|.+++++.+.+.+ +|. .++++
T Consensus 81 ~~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i~e~~g~~~~~d~~v~~~ 160 (431)
T 3ojo_A 81 PEASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPVIENLGFTIGEDIYLVHC 160 (431)
T ss_dssp CCCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHHHHTTTCCBTTTEEEEEC
T ss_pred hhhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHHHHHcCCCcCCCeEEEEC
Confidence 3589999999999872 22333333788899999999999999999999999987654 564 68999
Q ss_pred cCCCChHHhhcCce---EEEecCChhHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 025140 88 PVSGSKKPAEDGQL---IFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSMMATFSEGLLHSEKVG 164 (257)
Q Consensus 88 pV~g~~~~a~~g~l---~i~~gg~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~G 164 (257)
|.+..+..+..+.+ .+++|++++++++++++|+.++++++|+|++++|+++|+++|++.+.++++++|+..+|++.|
T Consensus 161 Pe~~~~G~A~~~~~~p~~Iv~G~~~~~~~~~~~ly~~~~~~~~~~~~~~~AE~~Kl~~N~~~a~~Ia~~nE~~~l~e~~G 240 (431)
T 3ojo_A 161 PERVLPGKILEELVHNNRIIGGVTKACIEAGKRVYRTFVQGEMIETDARTAEMSKLMENTYRDVNIALANELTKICNNLN 240 (431)
T ss_dssp CCCCCTTSHHHHHHHSCEEEEESSHHHHHHHHHHHTTTCCSCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCcCCCcchhhcccCCCEEEEeCCHHHHHHHHHHHHHHhCCcEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99988887766665 789999999999999999999988899999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcCCCchhhhccccccccCCCCCCCchhhHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Q 025140 165 LDPNVLVEVVSQGAISAPMYSLKGPSMIESLYPTAFPLKHQQKDLRLALGLAESVSQSTPIAAAANELYK 234 (257)
Q Consensus 165 ld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~ 234 (257)
+|++.++++++..+.. .++. ..++|...|+.||..+....+++.| ++++++.++-+
T Consensus 241 iD~~~v~~~~~~~~ri---------~~l~--pG~G~GG~C~pkD~~~L~~~a~~~~---~li~~~~~iN~ 296 (431)
T 3ojo_A 241 INVLDVIEMANKHPRV---------NIHQ--PGPGVGGHCLAVDPYFIIAKDPENA---KLIQTGREINN 296 (431)
T ss_dssp CCHHHHHHHHTTSTTC---------CCCC--CCSCCCCCCBCSCC---------CC---HHHHHHHHHHH
T ss_pred CCHHHHHHHHccCCCc---------ccCC--CCCCccccchhhhHHHHHHHHHHHh---HHHHHHHHHHH
Confidence 9999999999875311 0111 1246788999999999999999887 78888777644
No 32
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=99.94 E-value=2.7e-26 Score=212.65 Aligned_cols=209 Identities=16% Similarity=0.142 Sum_probs=174.5
Q ss_pred CccccCCHHHHHhcCCEEEEecCChH--------------HHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHH
Q 025140 12 RCRYQPSPDEVAASCDVTFAMLADPE--------------SAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHI 77 (257)
Q Consensus 12 Ga~~~~s~~ea~~~advvi~~l~~~~--------------~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~ 77 (257)
+.++++++.+++++||+||+|||++. .+++++ +++.+.+.++++||++||++|.+++++.+.+
T Consensus 73 ~l~~t~~~~~~~~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~---~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l 149 (481)
T 2o3j_A 73 NLFFSSDIPKAIAEADLIFISVNTPTKMYGRGKGMAPDLKYVESVS---RTIAQYAGGPKIVVEKSTVPVKAAESIGCIL 149 (481)
T ss_dssp TEEEESCHHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHH---HHHHHHCCSCEEEEECSCCCTTHHHHHHHHH
T ss_pred CEEEECCHHHHhhcCCEEEEecCCccccccccccCCCcHHHHHHHH---HHHHHhCCCCCEEEECCCCCCCHHHHHHHHH
Confidence 46778899999999999999999874 477777 6778888899999999999999999999999
Q ss_pred HH-cCCc-EEEecCCCChHHhhcCc-----e---EEEecCCh-----hHHHHHHHHHHHhcC-CceecCCCchHHHHHHH
Q 025140 78 KA-TGAS-FLEAPVSGSKKPAEDGQ-----L---IFLAAGDK-----SLYNTVAPLLDIMGK-SRFYLGDVGNGAAMKLV 141 (257)
Q Consensus 78 ~~-~G~~-~vdapV~g~~~~a~~g~-----l---~i~~gg~~-----~~~~~~~~ll~~~~~-~~~~~G~~G~a~~~Kl~ 141 (257)
++ .|.. .+|++|..+|..+..|. + .+++||+. +++++++++|+.++. .+++++++++++..|++
T Consensus 150 ~~~~~~~~~~d~~v~~~Pe~~~~G~a~~~~~~~~~iviG~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~d~~~ae~~Kl~ 229 (481)
T 2o3j_A 150 REAQKNNENLKFQVLSNPEFLAEGTAMKDLANPDRVLIGGESSPEGLQAVAELVRIYENWVPRNRIITTNTWSSELSKLV 229 (481)
T ss_dssp HHHTC----CCEEEEECCCCCCTTCHHHHHHSCSCEEEEECSSHHHHHHHHHHHHHHHTTSCGGGEEEEEHHHHHHHHHH
T ss_pred HHhhCcCcCCceEEEeCcccccccchhhcccCCCEEEEEecCchhhHHHHHHHHHHHHhhcCCCeEEecCHHHHHHHHHH
Confidence 88 6642 45666666666665555 2 68888865 578899999999986 78889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhcCCCchhhhccccccccCCCCCC--CchhhHHHHHHHHHHHHHhc
Q 025140 142 VNMIMGSMMATFSEGLLHSEKVGLDPNVLVEVVSQGAISAPMYSLKGPSMIESLYPTA--FPLKHQQKDLRLALGLAESV 219 (257)
Q Consensus 142 ~n~~~~~~~~~~~Ea~~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~--f~~~~~~KD~~~~~~~a~~~ 219 (257)
+|.+.+.++++++|+..+|++.|+|++++.++++.++ ++....|.|+ |...|+.||+.++...+++.
T Consensus 230 ~N~~~a~~ia~~nE~~~la~~~Gid~~~v~~~~~~~~-----------ri~~~~~~pg~g~gg~c~~KD~~~l~~~A~~~ 298 (481)
T 2o3j_A 230 ANAFLAQRISSINSISAVCEATGAEISEVAHAVGYDT-----------RIGSKFLQASVGFGGSCFQKDVLSLVYLCESL 298 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHTST-----------TTCSSSCCCCSCCCSSSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHccCC-----------CCCCCCCCCCCccCCccHHHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999863 1222334555 58889999999999999999
Q ss_pred CCC--cHHHHHHHHHHH
Q 025140 220 SQS--TPIAAAANELYK 234 (257)
Q Consensus 220 g~~--~p~~~~~~~~~~ 234 (257)
|++ +|+++.+.++-+
T Consensus 299 g~~~~~~l~~~~~~~N~ 315 (481)
T 2o3j_A 299 NLPQVADYWQGVININN 315 (481)
T ss_dssp TCHHHHHHHHHHHHHHH
T ss_pred CCCccchHHHHHHHHHH
Confidence 999 999988877544
No 33
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=99.94 E-value=2.1e-26 Score=212.83 Aligned_cols=206 Identities=15% Similarity=0.139 Sum_probs=175.5
Q ss_pred cCccccCCHHHHHhcCCEEEEecCChHH--------------HHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHH
Q 025140 11 SRCRYQPSPDEVAASCDVTFAMLADPES--------------AMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGH 76 (257)
Q Consensus 11 ~Ga~~~~s~~ea~~~advvi~~l~~~~~--------------v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~ 76 (257)
.|.++++++.+++++||+||+|||++.. +++++ +++.+.+.++++||++||++|.+++++.+.
T Consensus 68 ~~~~~t~~~~e~~~~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~---~~i~~~l~~g~iVV~~STv~~g~~~~l~~~ 144 (467)
T 2q3e_A 68 KNLFFSTNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACA---RRIVQNSNGYKIVTEKSTVPVRAAESIRRI 144 (467)
T ss_dssp TTEEEESCHHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHH---HHHHHTCCSEEEEEECSCCCTTHHHHHHHH
T ss_pred CCEEEECCHHHHHhcCCEEEEEcCCchhhccccccCCCcHHHHHHHH---HHHHhhCCCCCEEEECCcCCchHHHHHHHH
Confidence 4678889999999999999999998765 34444 456677889999999999999999999999
Q ss_pred HHHcCCcEEEecCCCChHHhhcCceE--------EEecC-----ChhHHHHHHHHHHHh-cCCceecCCCchHHHHHHHH
Q 025140 77 IKATGASFLEAPVSGSKKPAEDGQLI--------FLAAG-----DKSLYNTVAPLLDIM-GKSRFYLGDVGNGAAMKLVV 142 (257)
Q Consensus 77 ~~~~G~~~vdapV~g~~~~a~~g~l~--------i~~gg-----~~~~~~~~~~ll~~~-~~~~~~~G~~G~a~~~Kl~~ 142 (257)
+++.+..++|+||+++|+.+..|.+. +++|| +++++++++++|+.+ +..+++++++++|+..|+++
T Consensus 145 l~~~~~~~~d~~V~~~Pe~~~~G~~~~d~~~~~rivvGg~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~ae~~Kl~~ 224 (467)
T 2q3e_A 145 FDANTKPNLNLQVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAA 224 (467)
T ss_dssp HHHTCCTTCEEEEEECCCCCCTTSHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHHTTTSCGGGEEEECHHHHHHHHHHH
T ss_pred HHHhCCCCCCeEEEeCHHHhhcccchhhccCCCEEEECCCCCCCCHHHHHHHHHHHHHhccCCeEEecCHHHHHHHHHHH
Confidence 98887778999999999999999876 88998 778899999999999 66788999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhcCCCchhhhccccccccCCCCC--CCchhhHHHHHHHHHHHHHhcC
Q 025140 143 NMIMGSMMATFSEGLLHSEKVGLDPNVLVEVVSQGAISAPMYSLKGPSMIESLYPT--AFPLKHQQKDLRLALGLAESVS 220 (257)
Q Consensus 143 n~~~~~~~~~~~Ea~~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~--~f~~~~~~KD~~~~~~~a~~~g 220 (257)
|.+.+.++++++|++.+|++.|+|++.+.++++.++.. .+.+ +.| +|...|+.||+.++.+.+++.|
T Consensus 225 N~~~a~~ia~~nE~~~l~~~~Gid~~~v~~~~~~~~~~-------~~~~----~~pg~g~gg~c~~kD~~~l~~~a~~~g 293 (467)
T 2q3e_A 225 NAFLAQRISSINSISALCEATGADVEEVATAIGMDQRI-------GNKF----LKASVGFGGSCFQKDVLNLVYLCEALN 293 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTSTTT-------CSSS----CCCCSCCCSSSHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHcCCCCC-------Cccc----cCCCCCCCCccHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999986421 1111 233 4788899999999999999999
Q ss_pred CC--cHHHHHHH
Q 025140 221 QS--TPIAAAAN 230 (257)
Q Consensus 221 ~~--~p~~~~~~ 230 (257)
++ .++.+.+.
T Consensus 294 ~~~~~~~~~~~~ 305 (467)
T 2q3e_A 294 LPEVARYWQQVI 305 (467)
T ss_dssp CHHHHHHHHHHH
T ss_pred CchHHHHHHHHH
Confidence 87 44444443
No 34
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=99.93 E-value=1.3e-25 Score=207.81 Aligned_cols=209 Identities=17% Similarity=0.162 Sum_probs=181.5
Q ss_pred ccccCCHHHHHhcCCEEEEecCCh---------HHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHc---
Q 025140 13 CRYQPSPDEVAASCDVTFAMLADP---------ESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKAT--- 80 (257)
Q Consensus 13 a~~~~s~~ea~~~advvi~~l~~~---------~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~--- 80 (257)
.++.+++++++++||+||+|||+| ..+++++ +.+.+.+.++++||++||++|++++++.+.+.+.
T Consensus 72 l~~ttd~~~a~~~aDvviiaVptp~~~~~~~dl~~v~~v~---~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~~~~~~ 148 (478)
T 2y0c_A 72 LRFSTDIEAAVAHGDVQFIAVGTPPDEDGSADLQYVLAAA---RNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAEELAK 148 (478)
T ss_dssp EEEECCHHHHHHHCSEEEECCCCCBCTTSSBCCHHHHHHH---HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHH
T ss_pred EEEECCHHHHhhcCCEEEEEeCCCcccCCCccHHHHHHHH---HHHHHhcCCCCEEEEeCCcCCCchHHHHHHHHHHhcC
Confidence 577889999999999999999997 7899998 6777888899999999999999999999988764
Q ss_pred CCcE-EEecCCCChHHhhcCce--------EEEecCC-h----hHHHHHHHHHHHhcC--CceecCCCchHHHHHHHHHH
Q 025140 81 GASF-LEAPVSGSKKPAEDGQL--------IFLAAGD-K----SLYNTVAPLLDIMGK--SRFYLGDVGNGAAMKLVVNM 144 (257)
Q Consensus 81 G~~~-vdapV~g~~~~a~~g~l--------~i~~gg~-~----~~~~~~~~ll~~~~~--~~~~~G~~G~a~~~Kl~~n~ 144 (257)
| .| +|++|..+|+.+..|.+ .+++|++ + +.+++++++|+.+.+ .++++++++.++..|++.|.
T Consensus 149 g-~~~~~~~v~~~Pe~~~eG~~~~~~~~p~~iviG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~ 227 (478)
T 2y0c_A 149 R-GGDQMFSVVSNPEFLKEGAAVDDFTRPDRIVIGCDDDVPGERARELMKKLYAPFNRNHERTLYMDVRSAEFTKYAANA 227 (478)
T ss_dssp T-TCCCCEEEEECCCCCCTTCHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHTGGGGSSSCCEEEECHHHHHHHHHHHHH
T ss_pred C-CCCccEEEEEChhhhcccceeeccCCCCEEEEEECCCcccHHHHHHHHHHHHHHhccCCeEEcCCHHHHHHHHHHHHH
Confidence 4 45 78899999999999987 6888876 5 688999999998875 57888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhcCCCchhhhccccccccCCCCCC--CchhhHHHHHHHHHHHHHhcCCC
Q 025140 145 IMGSMMATFSEGLLHSEKVGLDPNVLVEVVSQGAISAPMYSLKGPSMIESLYPTA--FPLKHQQKDLRLALGLAESVSQS 222 (257)
Q Consensus 145 ~~~~~~~~~~Ea~~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~--f~~~~~~KD~~~~~~~a~~~g~~ 222 (257)
+.+.++++++|+..+|++.|+|++.+.+.++.. +++....+.|+ +...++.||+..+.+.+++.|++
T Consensus 228 ~~a~~ia~~nE~~~la~~~Gid~~~v~~~i~~~-----------~rig~~~~~pG~g~gg~c~~kD~~~l~~~A~~~gv~ 296 (478)
T 2y0c_A 228 MLATRISFMNELANLADRFGADIEAVRRGIGSD-----------PRIGYHFLYAGCGYGGSCFPKDVEALIRTADEHGQS 296 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTS-----------TTTCSTTCCCSSCCCSSSHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhcC-----------CccCcccCCCCcccccCcCHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999999888742 12323344554 46668899999999999999999
Q ss_pred cHHHHHHHHHHHHH
Q 025140 223 TPIAAAANELYKVA 236 (257)
Q Consensus 223 ~p~~~~~~~~~~~a 236 (257)
+|+++.+.++++..
T Consensus 297 ~pl~~~v~~in~~~ 310 (478)
T 2y0c_A 297 LQILKAVSSVNATQ 310 (478)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHh
Confidence 99999999988754
No 35
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=99.91 E-value=1.2e-24 Score=199.32 Aligned_cols=211 Identities=14% Similarity=0.095 Sum_probs=180.9
Q ss_pred cC-ccccCCHHHHHhcCCEEEEecCChHH---------HHHHhcCCCcccccCCC---CCEEEEcCCCCHHH-HHHHHHH
Q 025140 11 SR-CRYQPSPDEVAASCDVTFAMLADPES---------AMDVACGKHGAASGMGP---GKGYVDVSTVDGDT-SKLINGH 76 (257)
Q Consensus 11 ~G-a~~~~s~~ea~~~advvi~~l~~~~~---------v~~v~~~~~~~~~~l~~---g~~ivd~ST~~p~~-~~~la~~ 76 (257)
.| .+.++++.+++++||+||+|||++.. +++++ +.+.+.+.+ +++||++||+.|.+ .+.+.+.
T Consensus 61 ~g~l~~t~~~~~~~~~aDvviiaVptp~~~~~~~dl~~v~~v~---~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~ 137 (436)
T 1mv8_A 61 TGRLSGTTDFKKAVLDSDVSFICVGTPSKKNGDLDLGYIETVC---REIGFAIREKSERHTVVVRSTVLPGTVNNVVIPL 137 (436)
T ss_dssp TTCEEEESCHHHHHHTCSEEEECCCCCBCTTSSBCCHHHHHHH---HHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHH
T ss_pred cCceEEeCCHHHHhccCCEEEEEcCCCcccCCCcchHHHHHHH---HHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHH
Confidence 44 67788999999999999999999876 88887 567677777 99999999999999 7788888
Q ss_pred HHHc-CCcE-EEecCCCChHHhhcCce--------EEEecCC-hhHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHHH
Q 025140 77 IKAT-GASF-LEAPVSGSKKPAEDGQL--------IFLAAGD-KSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMI 145 (257)
Q Consensus 77 ~~~~-G~~~-vdapV~g~~~~a~~g~l--------~i~~gg~-~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~ 145 (257)
+.+. |.++ +|++|+.+|+.+..|.. .+++|++ ++..++++++|+.++..++ +++++.++..|++.|.+
T Consensus 138 l~~~~g~~~~~~~~v~~~Pe~~~~G~~~~~~~~~~~iv~G~~~~~~~~~~~~l~~~~~~~v~-~~~~~~ae~~Kl~~N~~ 216 (436)
T 1mv8_A 138 IEDCSGKKAGVDFGVGTNPEFLRESTAIKDYDFPPMTVIGELDKQTGDLLEEIYRELDAPII-RKTVEVAEMIKYTCNVW 216 (436)
T ss_dssp HHHHHSCCBTTTBEEEECCCCCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHHTTSSSCEE-EEEHHHHHHHHHHHHHH
T ss_pred HHHhcCcccCCcEEEEECcccccccccchhccCCCEEEEEcCCHHHHHHHHHHHhccCCCEE-cCCHHHHHHHHHHHHHH
Confidence 8775 8777 78899999999988887 7888886 8889999999999998654 47799999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhcCCCchhhhccccccc--cCCCCC--CCchhhHHHHHHHHHHHHHhcCC
Q 025140 146 MGSMMATFSEGLLHSEKVGLDPNVLVEVVSQGAISAPMYSLKGPSMI--ESLYPT--AFPLKHQQKDLRLALGLAESVSQ 221 (257)
Q Consensus 146 ~~~~~~~~~Ea~~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~--~~~~~~--~f~~~~~~KD~~~~~~~a~~~g~ 221 (257)
...++++++|+..+|++.|+|.+.+.+.+.... ++. .+.+.| +|...++.||+..+.+.+++.|+
T Consensus 217 ~a~~ia~~nE~~~l~~~~Gid~~~v~~~~~~~~-----------r~~~~~~~~~pg~g~gg~~~~kD~~~l~~~a~~~g~ 285 (436)
T 1mv8_A 217 HAAKVTFANEIGNIAKAVGVDGREVMDVICQDH-----------KLNLSRYYMRPGFAFGGSCLPKDVRALTYRASQLDV 285 (436)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCHHHHHHHHTTCT-----------TTTTSSTTCSCCSCCCSSSHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCC-----------CCCCcccCCCCcccccCcCcHhhHHHHHHHHHHcCC
Confidence 999999999999999999999999999987631 222 334444 68889999999999999999999
Q ss_pred CcHHHHHHHHHHHHH
Q 025140 222 STPIAAAANELYKVA 236 (257)
Q Consensus 222 ~~p~~~~~~~~~~~a 236 (257)
++|+++++.++.+..
T Consensus 286 ~~pl~~~v~~in~~~ 300 (436)
T 1mv8_A 286 EHPMLGSLMRSNSNQ 300 (436)
T ss_dssp CCTTGGGHHHHHHHH
T ss_pred CcHHHHHHHHHHhHh
Confidence 999999998876644
No 36
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=99.90 E-value=4.6e-23 Score=186.99 Aligned_cols=204 Identities=13% Similarity=0.076 Sum_probs=166.7
Q ss_pred cccCCHHHHHhcCCEEEEecCChH----------HHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCc
Q 025140 14 RYQPSPDEVAASCDVTFAMLADPE----------SAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGAS 83 (257)
Q Consensus 14 ~~~~s~~ea~~~advvi~~l~~~~----------~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~ 83 (257)
++.+++.+++++||+||+|||++. .+++++ +++.+ +.++++||++||++|.+++++.+.+.+. .
T Consensus 62 ~~t~~~~~~~~~aDvviiavpt~~~~~~~~~dl~~v~~v~---~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~--~ 135 (402)
T 1dlj_A 62 KATLDSKAAYKEAELVIIATPTNYNSRINYFDTQHVETVI---KEVLS-VNSHATLIIKSTIPIGFITEMRQKFQTD--R 135 (402)
T ss_dssp EEESCHHHHHHHCSEEEECCCCCEETTTTEECCHHHHHHH---HHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTCS--C
T ss_pred EEeCCHHHHhcCCCEEEEecCCCcccCCCCccHHHHHHHH---HHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCCC--e
Confidence 556788999999999999999984 688888 56777 7899999999999999999999887554 7
Q ss_pred EEEecCCCChHHhhcCce---EEEecCCh-------hHHHHHHHHHHH-hcC-C-ceecCCCchHHHHHHHHHHHHHHHH
Q 025140 84 FLEAPVSGSKKPAEDGQL---IFLAAGDK-------SLYNTVAPLLDI-MGK-S-RFYLGDVGNGAAMKLVVNMIMGSMM 150 (257)
Q Consensus 84 ~vdapV~g~~~~a~~g~l---~i~~gg~~-------~~~~~~~~ll~~-~~~-~-~~~~G~~G~a~~~Kl~~n~~~~~~~ 150 (257)
++.+|.+..+..+..+.+ .+++|++. +..+++.++|.. +.. + +++++++++++..|+++|.+.+.++
T Consensus 136 v~~~Pe~~~~G~a~~~~~~~~riviG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~i 215 (402)
T 1dlj_A 136 IIFSPEFLRESKALYDNLYPSRIIVSCEENDSPKVKADAEKFALLLKSAAKKNNVPVLIMGASEAEAVKLFANTYLALRV 215 (402)
T ss_dssp EEECCCCCCTTSTTHHHHSCSCEEEECCTTSCHHHHHHHHHHHHHHHHHCSCSCCCEEEECHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCccccCcchhhcccCCCEEEEeCCCcccchhHHHHHHHHHHHhhhhccCCceEEecChHHHHHHHHHHHHHHHHHH
Confidence 889999888776654433 38889877 556667777754 332 2 5788899999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHhhcCCCchhhhccccccccCCCCC--CCchhhHHHHHHHHHHHHHhcCCCcHHHHH
Q 025140 151 ATFSEGLLHSEKVGLDPNVLVEVVSQGAISAPMYSLKGPSMIESLYPT--AFPLKHQQKDLRLALGLAESVSQSTPIAAA 228 (257)
Q Consensus 151 ~~~~Ea~~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~--~f~~~~~~KD~~~~~~~a~~~g~~~p~~~~ 228 (257)
++++|+..+|++.|+|++.+.++++.++ + ..++ .+.| +|...|+.||+.++...++ |+++|++++
T Consensus 216 a~~nE~~~l~~~~Gid~~~v~~~~~~~~---r----i~~~----~~~pg~g~gg~c~~kD~~~l~~~a~--~~~~~l~~~ 282 (402)
T 1dlj_A 216 AYFNELDTYAESRKLNSHMIIQGISYDD---R----IGMH----YNNPSFGYGGYSLPKDTKQLLANYN--NIPQTLIEA 282 (402)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHTST---T----TCSS----SCCCCSSCCSSHHHHHHHHHHHHHT--TSSCSHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHhccCC---C----CCcC----CCCCCCccCCccHHhhHHHHHHHhc--CCChHHHHH
Confidence 9999999999999999999999998763 1 1121 2235 6888999999999998885 899999999
Q ss_pred HHHHHHHH
Q 025140 229 ANELYKVA 236 (257)
Q Consensus 229 ~~~~~~~a 236 (257)
+.++.+.-
T Consensus 283 ~~~~N~~~ 290 (402)
T 1dlj_A 283 IVSSNNVR 290 (402)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 98876644
No 37
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=99.84 E-value=1.6e-20 Score=170.98 Aligned_cols=211 Identities=18% Similarity=0.180 Sum_probs=164.5
Q ss_pred ccccCCHHHHHhcCCEEEEecCChH---------HHHHHhcCCCcccccC---CCCCEEEEcCCCCHHHHHHHHHHHHHc
Q 025140 13 CRYQPSPDEVAASCDVTFAMLADPE---------SAMDVACGKHGAASGM---GPGKGYVDVSTVDGDTSKLINGHIKAT 80 (257)
Q Consensus 13 a~~~~s~~ea~~~advvi~~l~~~~---------~v~~v~~~~~~~~~~l---~~g~~ivd~ST~~p~~~~~la~~~~~~ 80 (257)
.++..++.+++++||++|+|||+|. .++++. +.+.+.+ .+|++||..||++|.+++++...+.+.
T Consensus 85 l~~tt~~~~ai~~ad~~~I~VpTP~~~d~~~Dl~~v~~a~---~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~~ 161 (444)
T 3vtf_A 85 LSFAESAEEAVAATDATFIAVGTPPAPDGSADLRYVEAAA---RAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAVAE 161 (444)
T ss_dssp EEECSSHHHHHHTSSEEEECCCCCBCTTSSBCCHHHHHHH---HHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHHHT
T ss_pred eeEEcCHHHHHhcCCceEEEecCCCCCCCCCCcHHHHHHH---HHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHHHH
Confidence 4678999999999999999999862 355555 4555555 368999999999999999987655443
Q ss_pred CCcEEEecCCCChHHhhcCce--------EEEec-CChhHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHHHHHHHHH
Q 025140 81 GASFLEAPVSGSKKPAEDGQL--------IFLAA-GDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSMMA 151 (257)
Q Consensus 81 G~~~vdapV~g~~~~a~~g~l--------~i~~g-g~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~~~~~~~ 151 (257)
...-+|..|..+|++...|+. .+++| +++.+.+.++.+++.+...+++ .++.+|++.|++.|.+.+.+++
T Consensus 162 ~~~~~~f~v~~~PErl~eG~a~~d~~~~~riViG~~~~~a~~~~~~ly~~~~~~~~~-~~~~~AE~~Kl~eN~~ravnIa 240 (444)
T 3vtf_A 162 EAGGVKFSVASNPEFLREGSALEDFFKPDRIVIGAGDERAASFLLDVYKAVDAPKLV-MKPREAELVKYASNVFLALKIS 240 (444)
T ss_dssp TTTTCCCEEEECCCCCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHTTTSCSCEEE-ECHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCCCCceeecCcccccCCccccccccCCcEEEcCCCHHHHHHHHHHHhccCCCEEE-echhHHHHHHHHHHHHHHHHHH
Confidence 222346666677777766653 35666 4677888899999988776554 4678999999999999999999
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHhhcCCCchhhhccccccccCCCCCCCchhhHHHHHHHHHHHHHhcCCCcHHHHHHHH
Q 025140 152 TFSEGLLHSEKVGLDPNVLVEVVSQGAISAPMYSLKGPSMIESLYPTAFPLKHQQKDLRLALGLAESVSQSTPIAAAANE 231 (257)
Q Consensus 152 ~~~Ea~~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~ 231 (257)
+++|...+|++.|+|..++.+.++... + ....++.. .+||...|+.||.......+++.|++.++++++.+
T Consensus 241 ~~NEla~ice~~GiDv~eV~~a~~~d~---r----ig~~~l~P--G~G~GG~CipkD~~~L~~~a~~~g~~~~li~a~~~ 311 (444)
T 3vtf_A 241 FANEVGLLAKRLGVDTYRVFEAVGLDK---R----IGRHYFGA--GLGFGGSCFPKDTLAFIRFGESLGLEMAISKAVLR 311 (444)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHTST---T----SCSTTCCC--SSCCCTTTHHHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHhccCC---C----CCCCCCCC--CCCCCCcccCcCHHHHHHHHHhcCCCHHHHHhhHH
Confidence 999999999999999999999998642 1 11112211 24678999999999999999999999999999888
Q ss_pred HHHHH
Q 025140 232 LYKVA 236 (257)
Q Consensus 232 ~~~~a 236 (257)
+-+..
T Consensus 312 iN~~~ 316 (444)
T 3vtf_A 312 VNEYM 316 (444)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76543
No 38
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=99.77 E-value=2.4e-18 Score=146.83 Aligned_cols=204 Identities=9% Similarity=0.089 Sum_probs=158.1
Q ss_pred hhhhhc-CccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEc-CCCCHHHHHHHHHHHHHcCCc
Q 025140 6 NAFYYS-RCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDV-STVDGDTSKLINGHIKATGAS 83 (257)
Q Consensus 6 ~~~~~~-Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~-ST~~p~~~~~la~~~~~~G~~ 83 (257)
+.+.+. |.+...++.|++ ++|+||+|+| +.++++++ +.+.+ . +++||++ +++++ +.+.+.+. .+.+
T Consensus 38 ~~~~~~~g~~~~~~~~~~~-~~D~vi~~v~-~~~~~~v~---~~l~~--~-~~ivv~~~~g~~~---~~l~~~~~-~~~~ 105 (263)
T 1yqg_A 38 ERLEKELGVETSATLPELH-SDDVLILAVK-PQDMEAAC---KNIRT--N-GALVLSVAAGLSV---GTLSRYLG-GTRR 105 (263)
T ss_dssp HHHHHHTCCEEESSCCCCC-TTSEEEECSC-HHHHHHHH---TTCCC--T-TCEEEECCTTCCH---HHHHHHTT-SCCC
T ss_pred HHHHHhcCCEEeCCHHHHh-cCCEEEEEeC-chhHHHHH---HHhcc--C-CCEEEEecCCCCH---HHHHHHcC-CCCc
Confidence 345554 888888998988 9999999999 88899998 45544 4 8999999 78887 44555554 3678
Q ss_pred EEEecCCCChHHhhcCceEEEecC--ChhHHHHHHHHHHHhcCCceecC-C---------CchHHHHHHHHHHHHHHHHH
Q 025140 84 FLEAPVSGSKKPAEDGQLIFLAAG--DKSLYNTVAPLLDIMGKSRFYLG-D---------VGNGAAMKLVVNMIMGSMMA 151 (257)
Q Consensus 84 ~vdapV~g~~~~a~~g~l~i~~gg--~~~~~~~~~~ll~~~~~~~~~~G-~---------~G~a~~~Kl~~n~~~~~~~~ 151 (257)
++++ +.+.|.....|...++.++ +++.+++++++|+.++..+ +++ + .|.+. .+.+..+.
T Consensus 106 ~v~~-~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~l~~~~g~~~-~~~~~~~~~~~~al~g~~~-------~~~~~~~~ 176 (263)
T 1yqg_A 106 IVRV-MPNTPGKIGLGVSGMYAEAEVSETDRRIADRIMKSVGLTV-WLDDEEKMHGITGISGSGP-------AYVFYLLD 176 (263)
T ss_dssp EEEE-ECCGGGGGTCEEEEEECCTTSCHHHHHHHHHHHHTTEEEE-ECSSTTHHHHHHHHTTSHH-------HHHHHHHH
T ss_pred EEEE-cCCHHHHHcCceEEEEcCCCCCHHHHHHHHHHHHhCCCEE-EeCChhhccHHHHHHccHH-------HHHHHHHH
Confidence 9999 8888888888888888887 8899999999999999865 887 5 33332 22344455
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHhhcCCCch-hhhccc--c-ccccCCCCCCCchhhHHHHHHHHHHHHHhcCCCcHHHH
Q 025140 152 TFSEGLLHSEKVGLDPNVLVEVVSQGAISAP-MYSLKG--P-SMIESLYPTAFPLKHQQKDLRLALGLAESVSQSTPIAA 227 (257)
Q Consensus 152 ~~~Ea~~la~~~Gld~~~~~~~l~~~~~~s~-~~~~~~--~-~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~g~~~p~~~ 227 (257)
.+.|+ +++.|++++.+.+++..+...++ ++.... | .+.++.+.|+|++....||+ ++.|++.++.+
T Consensus 177 ~l~e~---~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-------~~~~~~~~~~~ 246 (263)
T 1yqg_A 177 ALQNA---AIRQGFDMAEARALSLATFKGAVALAEQTGEDFEKLQKNVTSKGGTTHEAVEAF-------RRHRVAEAISE 246 (263)
T ss_dssp HHHHH---HHHTTCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTCCTTSHHHHHHHHH-------HHTTHHHHHHH
T ss_pred HHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhcCCCChhHHHHHHHH-------HHCCHHHHHHH
Confidence 55665 88899999999999877654444 555444 5 55667788899888888777 56899999999
Q ss_pred HHHHHHHHHHHCC
Q 025140 228 AANELYKVAKSHG 240 (257)
Q Consensus 228 ~~~~~~~~a~~~g 240 (257)
++.+.|+++.+.|
T Consensus 247 a~~~~~~~~~~~~ 259 (263)
T 1yqg_A 247 GVCACVRRSQEME 259 (263)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998765
No 39
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.76 E-value=1.4e-17 Score=141.94 Aligned_cols=208 Identities=12% Similarity=0.140 Sum_probs=161.3
Q ss_pred hhhhc-CccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcC-CCCHHHHHHHHHHHHHcCCcE
Q 025140 7 AFYYS-RCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVS-TVDGDTSKLINGHIKATGASF 84 (257)
Q Consensus 7 ~~~~~-Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~S-T~~p~~~~~la~~~~~~G~~~ 84 (257)
.+.+. |.+.+.++.|+++++|+||+|+| +..+++++ ..+ .+|+++|+++ +++++. +.+.+. ++.++
T Consensus 41 ~~~~~~g~~~~~~~~~~~~~~D~Vi~~v~-~~~~~~v~---~~l----~~~~~vv~~~~~~~~~~---l~~~~~-~~~~~ 108 (259)
T 2ahr_A 41 EIAEQLALPYAMSHQDLIDQVDLVILGIK-PQLFETVL---KPL----HFKQPIISMAAGISLQR---LATFVG-QDLPL 108 (259)
T ss_dssp HHHHHHTCCBCSSHHHHHHTCSEEEECSC-GGGHHHHH---TTS----CCCSCEEECCTTCCHHH---HHHHHC-TTSCE
T ss_pred HHHHHcCCEeeCCHHHHHhcCCEEEEEeC-cHhHHHHH---HHh----ccCCEEEEeCCCCCHHH---HHHhcC-CCCCE
Confidence 45543 88888999999999999999999 67778887 333 3788999994 688764 444443 56788
Q ss_pred EEecCCCChHHhhcCceEEEecC--ChhHHHHHHHHHHHhcCCceecCCCchHHHHHHH--HHHHHHHHHHHHHHHHHHH
Q 025140 85 LEAPVSGSKKPAEDGQLIFLAAG--DKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLV--VNMIMGSMMATFSEGLLHS 160 (257)
Q Consensus 85 vdapV~g~~~~a~~g~l~i~~gg--~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~--~n~~~~~~~~~~~Ea~~la 160 (257)
++ ++.+.|.....|.+.++.|+ +++.+++++++|+.+| .++++++..-...+|+. .|.+....+.+++|+ +
T Consensus 109 v~-~~p~~~~~~~~g~~~i~~~~~~~~~~~~~~~~ll~~~G-~~~~~~~~~~d~~~al~g~~~~~~~~~~~~la~~---~ 183 (259)
T 2ahr_A 109 LR-IMPNMNAQILQSSTALTGNALVSQELQARVRDLTDSFG-STFDISEKDFDTFTALAGSSPAYIYLFIEALAKA---G 183 (259)
T ss_dssp EE-EECCGGGGGTCEEEEEEECTTCCHHHHHHHHHHHHTTE-EEEECCGGGHHHHHHHHTTHHHHHHHHHHHHHHH---H
T ss_pred EE-EcCCchHHHcCceEEEEcCCCCCHHHHHHHHHHHHhCC-CEEEecHHHccHHHHHhccHHHHHHHHHHHHHHH---H
Confidence 88 78888888888877777777 8899999999999999 58899987777777774 344445555666665 7
Q ss_pred HHcCCCHHHHHHHHhhcCCCch-hhhccc--cccccC-CCCCCCchhhHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Q 025140 161 EKVGLDPNVLVEVVSQGAISAP-MYSLKG--PSMIES-LYPTAFPLKHQQKDLRLALGLAESVSQSTPIAAAANELYKVA 236 (257)
Q Consensus 161 ~~~Gld~~~~~~~l~~~~~~s~-~~~~~~--~~~~~~-~~~~~f~~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~~a 236 (257)
.+.|+|.+.+++++..+...++ ++..+. |.++.+ .++|+|++....||++ +.|++..+.+++.+.++++
T Consensus 184 ~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~p~~~~~~~~~~l~-------~~g~~~~~~~a~~~~~~r~ 256 (259)
T 2ahr_A 184 VKNGIPKAKALEIVTQTVLASASNLKTSSQSPHDFIDAICSPGGTTIAGLMELE-------RLGLTATVSSAIDKTIDKA 256 (259)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHHHHHHSSSCHHHHHHHHCCTTSHHHHHHHHHH-------HHTHHHHHHHHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhCCCCChhHHHHHHHHH-------HCChHHHHHHHHHHHHHHH
Confidence 8899999999999988766665 555444 666644 4578999999899985 6788888999999988887
Q ss_pred HH
Q 025140 237 KS 238 (257)
Q Consensus 237 ~~ 238 (257)
.+
T Consensus 257 ~~ 258 (259)
T 2ahr_A 257 KS 258 (259)
T ss_dssp HH
T ss_pred hc
Confidence 54
No 40
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.75 E-value=1.9e-19 Score=152.75 Aligned_cols=134 Identities=19% Similarity=0.252 Sum_probs=114.7
Q ss_pred cCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcc-cccCCCCCEEEEcC-----------CCCHHHHHHHHHHHH
Q 025140 11 SRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGA-ASGMGPGKGYVDVS-----------TVDGDTSKLINGHIK 78 (257)
Q Consensus 11 ~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~-~~~l~~g~~ivd~S-----------T~~p~~~~~la~~~~ 78 (257)
.|...+.|+.|++++||+||+|||++...+ ++ ..+ ...+ ++++|||+| |+.|++.+.+++.++
T Consensus 76 ~~~~~~~~~~e~~~~aDvVilavp~~~~~~-~~---~~i~~~~l-~g~ivi~~s~~~~~~~G~~~t~~~~~~~~~~~~l~ 150 (245)
T 3dtt_A 76 HPHVHLAAFADVAAGAELVVNATEGASSIA-AL---TAAGAENL-AGKILVDIANPLDFSHGMPPTLNPVNTDSLGEQIQ 150 (245)
T ss_dssp STTCEEEEHHHHHHHCSEEEECSCGGGHHH-HH---HHHCHHHH-TTSEEEECCCCEECTTCSSCEESSCSSCCHHHHHH
T ss_pred cCceeccCHHHHHhcCCEEEEccCcHHHHH-HH---HHhhhhhc-CCCEEEECCCCCCCcCCccccccCCCCccHHHHHH
Confidence 367778999999999999999999876654 44 233 3344 899999999 889988888888887
Q ss_pred Hc--------CCcEEEecCCCChHHhhcCceEEEecC-ChhHHHHHHHHHHHhcC-CceecCCCchHHHHHHHHHHHHHH
Q 025140 79 AT--------GASFLEAPVSGSKKPAEDGQLIFLAAG-DKSLYNTVAPLLDIMGK-SRFYLGDVGNGAAMKLVVNMIMGS 148 (257)
Q Consensus 79 ~~--------G~~~vdapV~g~~~~a~~g~l~i~~gg-~~~~~~~~~~ll~~~~~-~~~~~G~~G~a~~~Kl~~n~~~~~ 148 (257)
+. |..|+|+||++++..++.+++.++++| +++++++++++|+.++. .++|+|+.|+|+.+|+++|++...
T Consensus 151 ~~l~~~~vv~~~~~~~a~v~~~~~~a~~g~~~~~v~g~d~~~~~~v~~ll~~~g~~~~~~~G~~g~a~~~k~~~~~~~~l 230 (245)
T 3dtt_A 151 RTFPEAKVVKTLNTMNASLMVDPGRAAGGDHSVFVSGNDAAAKAEVATLLKSLGHQDVIDLGDITTARGAEMLLPVWIRL 230 (245)
T ss_dssp HHSTTSEEEECSTTSCHHHHHCGGGTGGGCCCEEEECSCHHHHHHHHHHHHHTTCCCEEEEESGGGHHHHHTTHHHHHHH
T ss_pred HHCCCCeEEEeecccCHHHhcCccccCCCCeeEEEECCCHHHHHHHHHHHHHcCCCceeccCcHHHHHHhhhhHHHHHHH
Confidence 74 889999999999999989999889876 58999999999999996 468999999999999999999866
Q ss_pred H
Q 025140 149 M 149 (257)
Q Consensus 149 ~ 149 (257)
+
T Consensus 231 ~ 231 (245)
T 3dtt_A 231 W 231 (245)
T ss_dssp H
T ss_pred H
Confidence 5
No 41
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.74 E-value=2.7e-18 Score=149.67 Aligned_cols=214 Identities=14% Similarity=0.071 Sum_probs=155.7
Q ss_pred CHHHHHh---cCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHc----CCcEEEecCC
Q 025140 18 SPDEVAA---SCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKAT----GASFLEAPVS 90 (257)
Q Consensus 18 s~~ea~~---~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~----G~~~vdapV~ 90 (257)
++.|+.+ ++|+||+|+|. .++++++ +.+.+.+.++++||++++.. +..+.+.+.+.+. |..+.+++++
T Consensus 64 ~~~~~~~~~~~~d~vi~~v~~-~~~~~v~---~~l~~~l~~~~~iv~~~~g~-~~~~~l~~~~~~~~vi~g~~~~~~~~~ 138 (316)
T 2ew2_A 64 SPEEIDHQNEQVDLIIALTKA-QQLDAMF---KAIQPMITEKTYVLCLLNGL-GHEDVLEKYVPKENILVGITMWTAGLE 138 (316)
T ss_dssp CGGGCCTTSCCCSEEEECSCH-HHHHHHH---HHHGGGCCTTCEEEECCSSS-CTHHHHTTTSCGGGEEEEEECCCCEEE
T ss_pred cchhhcccCCCCCEEEEEecc-ccHHHHH---HHHHHhcCCCCEEEEecCCC-CcHHHHHHHcCCccEEEEEeeeeeEEc
Confidence 4455554 89999999996 4678888 56777778899999998743 3445666655543 3334455666
Q ss_pred CC--hHHhhcCceEEEe--cCChhHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHHHH--------------------
Q 025140 91 GS--KKPAEDGQLIFLA--AGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIM-------------------- 146 (257)
Q Consensus 91 g~--~~~a~~g~l~i~~--gg~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~~-------------------- 146 (257)
+. +.....|.+.+.. +++++.+++++++|+.++.++++.++++.++..|++.|.+.
T Consensus 139 ~p~~~~~~~~g~~~i~~~~~~~~~~~~~~~~ll~~~g~~~~~~~d~~~~~~~Kl~~N~~~~~~~al~~~~~~~~~~~~~~ 218 (316)
T 2ew2_A 139 GPGRVKLLGDGEIELENIDPSGKKFALEVVDVFQKAGLNPSYSSNVRYSIWRKACVNGTLNGLCTILDCNIAEFGALPVS 218 (316)
T ss_dssp ETTEEEECSCCCEEEEESSGGGHHHHHHHHHHHHHTTCCEEECTTHHHHHHHHHHHHTTHHHHHHHHTCCHHHHHTSTTH
T ss_pred CCCEEEEecCCcEEEeecCCCccHHHHHHHHHHHhCCCCcEEchhHHHHHHHHHHHhhhHHHHHHHhCCcHHHHHhCHHH
Confidence 53 3334567766653 56788899999999999998888888999999999999642
Q ss_pred -HHHHHHHHHHHHHHHHcCCCH--HHHHHHHhhcCCCchhhhccccccccCCC-CCCCchhhHHHHHHHHHHHHHhcCCC
Q 025140 147 -GSMMATFSEGLLHSEKVGLDP--NVLVEVVSQGAISAPMYSLKGPSMIESLY-PTAFPLKHQQKDLRLALGLAESVSQS 222 (257)
Q Consensus 147 -~~~~~~~~Ea~~la~~~Gld~--~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~f~~~~~~KD~~~~~~~a~~~g~~ 222 (257)
..+..++.|++.++++.|+++ +.+.+.+..........++ .+.|. .|+ ..++..+ ..||+..+.+.+++.|++
T Consensus 219 ~~~~~~~~~E~~~la~~~G~~~~~~~~~~~~~~~~~~~~~~~~-~~sm~-~d~~~~g~~~E-~~~~~~~~~~~a~~~gv~ 295 (316)
T 2ew2_A 219 ESLVKTLISEFAAVAEKEAIYLDQAEVYTHIVQTYDPNGIGLH-YPSMY-QDLIKNHRLTE-IDYINGAVWRKGQKYNVA 295 (316)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTTCTTTTTTS-CCHHH-HHHTTTCCCCS-GGGTHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHhccccCCCC-CcHHH-HHHHHcCCcch-HHHHhhHHHHHHHHhCCC
Confidence 456788999999999999986 5677777653211100122 12232 344 4555566 689999999999999999
Q ss_pred cHHHHHHHHHHHHHHHC
Q 025140 223 TPIAAAANELYKVAKSH 239 (257)
Q Consensus 223 ~p~~~~~~~~~~~a~~~ 239 (257)
+|+.+.+.++++.....
T Consensus 296 ~P~~~~~~~~~~~~~~~ 312 (316)
T 2ew2_A 296 TPFCAMLTQLVHGKEEL 312 (316)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhh
Confidence 99999999999887653
No 42
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=99.71 E-value=1.6e-17 Score=146.26 Aligned_cols=223 Identities=9% Similarity=-0.024 Sum_probs=156.5
Q ss_pred cccC--CHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcC-CC---CHHHHHHHHHHHHHc-CCcEEE
Q 025140 14 RYQP--SPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVS-TV---DGDTSKLINGHIKAT-GASFLE 86 (257)
Q Consensus 14 ~~~~--s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~S-T~---~p~~~~~la~~~~~~-G~~~vd 86 (257)
+..+ ++.|+++++|+||+|+|++ ++++++ +.+.+ +.++++||+++ ++ .|++.+.+++.+.+. |..+ +
T Consensus 58 ~~~~~~~~~~~~~~~D~vi~~v~~~-~~~~v~---~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~~g~~~-~ 131 (335)
T 1txg_A 58 EIFWPEQLEKCLENAEVVLLGVSTD-GVLPVM---SRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDLRE-R 131 (335)
T ss_dssp EEECGGGHHHHHTTCSEEEECSCGG-GHHHHH---HHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTTSTTCGG-G
T ss_pred EEecHHhHHHHHhcCCEEEEcCChH-HHHHHH---HHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHHhcCCCC-c
Confidence 4455 8889999999999999986 677887 56767 77899999998 55 666777788887663 5422 4
Q ss_pred ecCCCChHHhhc---Cc--eEEEecCChhHHHHHHHHHHHhcCCceecCCC-----------------chHHHHHHH---
Q 025140 87 APVSGSKKPAED---GQ--LIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDV-----------------GNGAAMKLV--- 141 (257)
Q Consensus 87 apV~g~~~~a~~---g~--l~i~~gg~~~~~~~~~~ll~~~~~~~~~~G~~-----------------G~a~~~Kl~--- 141 (257)
.++..+|..+.. +. ..++.+++++.+++++++|+..+.++++.+++ |....+|+.
T Consensus 132 ~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ll~~~g~~~~~~~di~~~~~~k~~~N~~~~~~~~~~~~~~~~l~ 211 (335)
T 1txg_A 132 TVAITGPAIAREVAKRMPTTVVFSSPSESSANKMKEIFETEYFGVEVTTDIIGTEITSALKNVYSIAIAWIRGYESRKNV 211 (335)
T ss_dssp EEEEESSCCHHHHHTTCCEEEEEECSCHHHHHHHHHHHCBTTEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEECCCcHHHHHccCCcEEEEEeCCHHHHHHHHHHhCCCcEEEEecCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 444555544322 33 34455567888999999999888877777775 334446888
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHcCCCHHHHH------HHHhhcCCCchhhhccccccccCCCCCCCch-----------
Q 025140 142 --VNMIMGSMMATFSEGLLHSEKVGLDPNVLV------EVVSQGAISAPMYSLKGPSMIESLYPTAFPL----------- 202 (257)
Q Consensus 142 --~n~~~~~~~~~~~Ea~~la~~~Gld~~~~~------~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~----------- 202 (257)
+|.+...+..++.|++.++++.|++++.++ +.+..... +... .... .+.++|++
T Consensus 212 ~~~n~~~~~~~~~~~E~~~la~~~G~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~----~~~~~~s~~~d~~~~~~~~ 284 (335)
T 1txg_A 212 EMSNAKGVIATRAINEMAELIEILGGDRETAFGLSGFGDLIATFRG-GRNG--MLGE----LLGKGLSIDEAMEELERRG 284 (335)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTSCGGGGGSTTTHHHHHHTTTC-HHHH--HHHH----HHHTTCCHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCcchhhcccchhheeecccc-CccH--HHHH----HHhCCCCHHHHHHHhccCC
Confidence 888888889999999999999999987664 55554322 2110 0111 11223332
Q ss_pred ---hhHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHCCCCCcchHHHHHHHHhC
Q 025140 203 ---KHQQKDLRLALGLAESVSQSTPIAAAANELYKVAKSHGLSDEDFSAVIEALKAK 256 (257)
Q Consensus 203 ---~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g~g~~d~~a~~~~~~~~ 256 (257)
....||+.++.+++++.|+++|+.+.+.++++. ..+...+++.+...
T Consensus 285 ~~~~E~~~~~~~~~~~a~~~gv~~P~~~~~~~~~~~-------~~~~~~~~~~l~~~ 334 (335)
T 1txg_A 285 VGVVEGYKTAEKAYRLSSKINADTKLLDSIYRVLYE-------GLKVEEVLFELATF 334 (335)
T ss_dssp CCCCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHS-------CCCHHHHHHHHHTT
T ss_pred ceecchHHHHHHHHHHHHHcCCCCcHHHHHHHHHhC-------CCCHHHHHHHHHcC
Confidence 223599999999999999999999999988753 23566655555443
No 43
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=99.71 E-value=2.7e-18 Score=151.88 Aligned_cols=221 Identities=11% Similarity=0.044 Sum_probs=153.6
Q ss_pred ccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEecCCC
Q 025140 13 CRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVS-TVDGDTSKLINGHIKATGASFLEAPVSG 91 (257)
Q Consensus 13 a~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~S-T~~p~~~~~la~~~~~~G~~~vdapV~g 91 (257)
.+.++++.| ++++|+||+|||+ .++++++ +++.+ ++++||+++ +++|++.+.+++.+.+... .++++.+
T Consensus 69 ~~~~~~~~~-~~~aDvVil~vk~-~~~~~v~---~~l~~---~~~~vv~~~nGi~~~~~~~l~~~~~~~~~--~~~~~~~ 138 (335)
T 1z82_A 69 VRATNDLEE-IKKEDILVIAIPV-QYIREHL---LRLPV---KPSMVLNLSKGIEIKTGKRVSEIVEEILG--CPYAVLS 138 (335)
T ss_dssp SEEESCGGG-CCTTEEEEECSCG-GGHHHHH---TTCSS---CCSEEEECCCCCCTTTCCCHHHHHHHHTC--CCEEEEE
T ss_pred EEEeCCHHH-hcCCCEEEEECCH-HHHHHHH---HHhCc---CCCEEEEEeCCCCCCccCcHHHHHHHHcC--CceEEEE
Confidence 567889999 9999999999995 8899998 45543 789999999 5788777788888876532 4677777
Q ss_pred ChHHhh---cCceE-EEecCChhHHHHHHHHHHHhcCCceecCCC-----------------chHHHHHHHHHHHHHHHH
Q 025140 92 SKKPAE---DGQLI-FLAAGDKSLYNTVAPLLDIMGKSRFYLGDV-----------------GNGAAMKLVVNMIMGSMM 150 (257)
Q Consensus 92 ~~~~a~---~g~l~-i~~gg~~~~~~~~~~ll~~~~~~~~~~G~~-----------------G~a~~~Kl~~n~~~~~~~ 150 (257)
+|..+. .|.+. +.+|+++ +++++++|+..+.++++.+++ |.++.+|+.+|.+.....
T Consensus 139 ~P~~~~~~~~g~~~~~~~g~~~--~~~~~~ll~~~g~~~~~~~di~~~~~~k~l~N~~~~~~g~~~g~~~~~n~~~a~~~ 216 (335)
T 1z82_A 139 GPSHAEEVAKKLPTAVTLAGEN--SKELQKRISTEYFRVYTCEDVVGVEIAGALKNVIAIAAGILDGFGGWDNAKAALET 216 (335)
T ss_dssp SSCCHHHHHTTCCEEEEEEETT--HHHHHHHHCCSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred CCccHHHHhCCCceEEEEEehh--HHHHHHHhCCCCEEEEecCchHHHHHHHHHHhHHHHHHHHHhcCCCCchhHHHHHH
Confidence 776554 56643 3444443 789999999888777666553 223445666888888889
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHHhhc----CCCchhhhcc--ccccccCCCCC------CCchhhHHHHHHHHHHHHHh
Q 025140 151 ATFSEGLLHSEKVGLDPNVLVEVVSQG----AISAPMYSLK--GPSMIESLYPT------AFPLKHQQKDLRLALGLAES 218 (257)
Q Consensus 151 ~~~~Ea~~la~~~Gld~~~~~~~l~~~----~~~s~~~~~~--~~~~~~~~~~~------~f~~~~~~KD~~~~~~~a~~ 218 (257)
.++.|++.++++.|++++.+.++...+ ...|+..+++ .+.+.++ +.+ .++.....||++.+.+++++
T Consensus 217 ~~~~E~~~la~a~G~~~~~~~~l~~~~~~~~t~~s~~~~n~~~~~~~~~g-~~~~~~~~~~g~~~e~~~~~~~v~~~a~~ 295 (335)
T 1z82_A 217 RGIYEIARFGMFFGADQKTFMGLAGIGDLMVTCNSRYSRNRRFGELIARG-FNPLKLLESSNQVVEGAFTVKAVMKIAKE 295 (335)
T ss_dssp HHHHHHHHHHHHTTCCHHHHTSTTTHHHHHHHHHCTTCHHHHHHHHHHHT-CCHHHHHHTCSSCCTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCChhhhcccccccceeeeccCccCcHHHHHHHHhCC-CCHHHHHHhcCCeeeHHHHHHHHHHHHHH
Confidence 999999999999999998876531100 0112222221 1222222 111 12333467999999999999
Q ss_pred cCCCcHHHHHHHHHHHHHHHCCCCCcchHHHHHHH
Q 025140 219 VSQSTPIAAAANELYKVAKSHGLSDEDFSAVIEAL 253 (257)
Q Consensus 219 ~g~~~p~~~~~~~~~~~a~~~g~g~~d~~a~~~~~ 253 (257)
.|+++|+.+.+.++++ .+.+...+++.+
T Consensus 296 ~gv~~P~~~~v~~~~~-------~~~~~~~~~~~l 323 (335)
T 1z82_A 296 NKIDMPISEEVYRVVY-------EGKPPLQSMRDL 323 (335)
T ss_dssp TTCCCHHHHHHHHHHH-------SCCCHHHHHHHH
T ss_pred hCCCCcHHHHHHHHHh-------CCCCHHHHHHHH
Confidence 9999999999998874 235555555544
No 44
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=99.70 E-value=4.6e-17 Score=145.25 Aligned_cols=214 Identities=9% Similarity=0.022 Sum_probs=161.3
Q ss_pred ccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCC-CCHHHHHHHHHHHHH----cCCcEEEe
Q 025140 13 CRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVST-VDGDTSKLINGHIKA----TGASFLEA 87 (257)
Q Consensus 13 a~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST-~~p~~~~~la~~~~~----~G~~~vda 87 (257)
.++.+++.|+++++|+||+|+|. ..+++++ +.+.+.+.++++||++++ +.|++ +.+.+.+++ ....++.+
T Consensus 87 i~~t~d~~ea~~~aDvVilaVp~-~~~~~vl---~~i~~~l~~~~ivvs~~kGi~~~t-~~~se~i~~~l~~~~~~vlsg 161 (356)
T 3k96_A 87 LKAYCDLKASLEGVTDILIVVPS-FAFHEVI---TRMKPLIDAKTRIAWGTKGLAKGS-RLLHEVVATELGQVPMAVISG 161 (356)
T ss_dssp EEEESCHHHHHTTCCEEEECCCH-HHHHHHH---HHHGGGCCTTCEEEECCCSCBTTT-BCHHHHHHHHHCSCCEEEEES
T ss_pred eEEECCHHHHHhcCCEEEECCCH-HHHHHHH---HHHHHhcCCCCEEEEEeCCCCcCc-cCHHHHHHHHcCCCCEEEEEC
Confidence 45678999999999999999996 5788888 677777888999999987 77776 666666654 34557888
Q ss_pred cCCCChHHhhcCceEEEecCChhHHHHHHHHHHHhcCCceecCC-----------------CchHHHHHHHHHHHHHHHH
Q 025140 88 PVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGD-----------------VGNGAAMKLVVNMIMGSMM 150 (257)
Q Consensus 88 pV~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~~G~-----------------~G~a~~~Kl~~n~~~~~~~ 150 (257)
|.+.........+..++.+.+.+..++++++|+..+.++++..+ .|.+..+|+.+|...+.+.
T Consensus 162 P~~a~ev~~g~pt~~via~~~~~~~~~v~~lf~~~~~rv~~~~Di~g~e~~galkNviaia~G~~~gl~~g~N~~aal~~ 241 (356)
T 3k96_A 162 PSLATEVAANLPTAVSLASNNSQFSKDLIERLHGQRFRVYKNDDMIGVELCGSVKNILAIATGISDGLKLGSNARAALIT 241 (356)
T ss_dssp SCCHHHHHTTCCEEEEEEESCHHHHHHHHHHHCCSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred ccHHHHHHcCCCeEEEEecCCHHHHHHHHHHhCCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHHhhccCCchHHHHHHH
Confidence 88877666666676777788999999999999987766655554 2456667899999999999
Q ss_pred HHHHHHHHHHHHcCCCHHHHHH------HHhhcCCCchhhhccc--cccccCCCCCC------CchhhHHHHHHHHHHHH
Q 025140 151 ATFSEGLLHSEKVGLDPNVLVE------VVSQGAISAPMYSLKG--PSMIESLYPTA------FPLKHQQKDLRLALGLA 216 (257)
Q Consensus 151 ~~~~Ea~~la~~~Gld~~~~~~------~l~~~~~~s~~~~~~~--~~~~~~~~~~~------f~~~~~~KD~~~~~~~a 216 (257)
.+++|+..++++.|++++.+++ ++.+ +.|+..+++. ..+-+| ++.. ..+....++.+.+.+++
T Consensus 242 ~~l~E~~~l~~a~G~~~~t~~gl~g~gDl~~t--c~s~~sRN~~~G~~l~~g-~~~~~~~~~~~~~~eG~~t~~~~~~la 318 (356)
T 3k96_A 242 RGLTEMGRLVSVFGGKQETLTGLAGLGDLVLT--CTDNQSRNRRFGLALGEG-VDKKEAQQAIGQAIEGLYNTDQVHALA 318 (356)
T ss_dssp HHHHHHHHHHHHTTCCHHHHTSTTTHHHHHHH--HHCTTCHHHHHHHHHHHT-CCHHHHHHHHCSCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCChHhhcccchhhHHHHh--ccCCCCccHHHHHHHHCC-CCHHHHHHHcCCccchHHHHHHHHHHH
Confidence 9999999999999999998874 3333 2234444331 123222 1110 12345678999999999
Q ss_pred HhcCCCcHHHHHHHHHHH
Q 025140 217 ESVSQSTPIAAAANELYK 234 (257)
Q Consensus 217 ~~~g~~~p~~~~~~~~~~ 234 (257)
++.|+++|+++.+++++.
T Consensus 319 ~~~~v~~Pi~~~v~~il~ 336 (356)
T 3k96_A 319 QKHAIEMPLTFQVHRILH 336 (356)
T ss_dssp HHTTCCCHHHHHHHHHHH
T ss_pred HHcCCCCcHHHHHHHHHh
Confidence 999999999999999864
No 45
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.69 E-value=1e-17 Score=144.41 Aligned_cols=206 Identities=15% Similarity=0.089 Sum_probs=149.0
Q ss_pred cCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHH--cCCcEEEecCCCC-
Q 025140 16 QPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKA--TGASFLEAPVSGS- 92 (257)
Q Consensus 16 ~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~--~G~~~vdapV~g~- 92 (257)
+++ .++++++|+||+|+|++. +++++ +++.+.+.++++||++++ .++..+.+.+.+.+ .|..+..+.+.++
T Consensus 55 ~~~-~~~~~~~d~vi~~v~~~~-~~~v~---~~l~~~l~~~~~vv~~~~-g~~~~~~l~~~~~~~~~g~~~~~~~~~~p~ 128 (291)
T 1ks9_A 55 AND-PDFLATSDLLLVTLKAWQ-VSDAV---KSLASTLPVTTPILLIHN-GMGTIEELQNIQQPLLMGTTTHAARRDGNV 128 (291)
T ss_dssp ESC-HHHHHTCSEEEECSCGGG-HHHHH---HHHHTTSCTTSCEEEECS-SSCTTGGGTTCCSCEEEEEECCEEEEETTE
T ss_pred ecC-ccccCCCCEEEEEecHHh-HHHHH---HHHHhhCCCCCEEEEecC-CCCcHHHHHHhcCCeEEEEEeEccEEcCCE
Confidence 344 477889999999999875 68888 567777788999999865 34444455555443 3433222223332
Q ss_pred hHHhhcCceEEEe-cCChhHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHHHH------------------HHHHHHH
Q 025140 93 KKPAEDGQLIFLA-AGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIM------------------GSMMATF 153 (257)
Q Consensus 93 ~~~a~~g~l~i~~-gg~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~~------------------~~~~~~~ 153 (257)
+..+..|.+.+.. +++++.+++++++|+.++.++++.++++.+...|++.|..+ ..+..++
T Consensus 129 ~~~~~~g~~~i~~~~~~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~n~~tal~~~~~g~~~~~~~~~~~~~ 208 (291)
T 1ks9_A 129 IIHVANGITHIGPARQQDGDYSYLADILQTVLPDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQIC 208 (291)
T ss_dssp EEEEECCCEEEEESSGGGTTCTHHHHHHHTTSSCEEECTTHHHHHHHHHHHHHHHHHHHHHTTCCGGGGGGCHHHHHHHH
T ss_pred EEEecccceEEccCCCCcchHHHHHHHHHhcCCCCeecHHHHHHHHHHHeeeeeecHHHHHHCCCchHHHhHHHHHHHHH
Confidence 4556678777765 56677889999999999999889999999999999999987 6788999
Q ss_pred HHHHHHHHHcCCCH--HHH----HHHHhhc-CCCchhhhccccccccCCCCCCCchhhHHHHHHHHHHHHHhcCCCcHHH
Q 025140 154 SEGLLHSEKVGLDP--NVL----VEVVSQG-AISAPMYSLKGPSMIESLYPTAFPLKHQQKDLRLALGLAESVSQSTPIA 226 (257)
Q Consensus 154 ~Ea~~la~~~Gld~--~~~----~~~l~~~-~~~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~g~~~p~~ 226 (257)
.|++.++++.|++. +.+ .+++... ...|++++. +..+++.+.- ++..++.++++++|+|+|+.
T Consensus 209 ~E~~~va~a~G~~~~~~~~~~~~~~~~~~~~~~~ssm~~d---------~~~g~~~e~~-~~~g~~~~~a~~~gv~~P~~ 278 (291)
T 1ks9_A 209 EEVAAVIEREGHHTSAEDLRDYVMQVIDATAENISSMLQD---------IRALRHTEID-YINGFLLRRARAHGIAVPEN 278 (291)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHHHHHHHHTTTCCCHHHHH---------HHTTCCCSGG-GTHHHHHHHHHHHTCCCHHH
T ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCCCCChHHHH---------HHcCCccHHH-HHHHHHHHHHHHhCCCCCHH
Confidence 99999999999986 444 4444433 234444322 2222222222 56888999999999999999
Q ss_pred HHHHHHHHHHH
Q 025140 227 AAANELYKVAK 237 (257)
Q Consensus 227 ~~~~~~~~~a~ 237 (257)
+.+.++++...
T Consensus 279 ~~~~~~~~~~e 289 (291)
T 1ks9_A 279 TRLFEMVKRKE 289 (291)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999988653
No 46
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=99.69 E-value=8.7e-17 Score=141.56 Aligned_cols=221 Identities=14% Similarity=0.109 Sum_probs=150.9
Q ss_pred hhhhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHc--CCc
Q 025140 6 NAFYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKAT--GAS 83 (257)
Q Consensus 6 ~~~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~--G~~ 83 (257)
+.+.+.|++.+.++.|+++++|+||+||| +.++++++ +++...+.++++||++++..+. ..+++++.+. +.+
T Consensus 65 ~~l~~~G~~~~~~~~e~~~~aDvVilav~-~~~~~~vl---~~l~~~l~~~~ivvs~s~gi~~--~~l~~~l~~~~~~~~ 138 (322)
T 2izz_A 65 SALRKMGVKLTPHNKETVQHSDVLFLAVK-PHIIPFIL---DEIGADIEDRHIVVSCAAGVTI--SSIEKKLSAFRPAPR 138 (322)
T ss_dssp HHHHHHTCEEESCHHHHHHHCSEEEECSC-GGGHHHHH---HHHGGGCCTTCEEEECCTTCCH--HHHHHHHHTTSSCCE
T ss_pred HHHHHcCCEEeCChHHHhccCCEEEEEeC-HHHHHHHH---HHHHhhcCCCCEEEEeCCCCCH--HHHHHHHhhcCCCCe
Confidence 45667799999999999999999999999 68889998 5676677789999999764432 2466666653 334
Q ss_pred EEEecCCCChHHhhcCceEEEecCC---hhHHHHHHHHHHHhcCCceecCCCchHHHHHHH--HHHHHHHHHHHHHHHHH
Q 025140 84 FLEAPVSGSKKPAEDGQLIFLAAGD---KSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLV--VNMIMGSMMATFSEGLL 158 (257)
Q Consensus 84 ~vdapV~g~~~~a~~g~l~i~~gg~---~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~--~n~~~~~~~~~~~Ea~~ 158 (257)
++- .+...|.....|. .++++|+ ++.+++++++|+.+|..+ ++.+..-.....+. .|.+.+..+.+++|+
T Consensus 139 vv~-~~p~~p~~~~~g~-~v~~~g~~~~~~~~~~v~~ll~~~G~~~-~~~e~~~~~~~a~~g~gpa~~~~~~eala~a-- 213 (322)
T 2izz_A 139 VIR-CMTNTPVVVREGA-TVYATGTHAQVEDGRLMEQLLSSVGFCT-EVEEDLIDAVTGLSGSGPAYAFTALDALADG-- 213 (322)
T ss_dssp EEE-EECCGGGGGTCEE-EEEEECTTCCHHHHHHHHHHHHTTEEEE-ECCGGGHHHHHHHTTTHHHHHHHHHHHHHHH--
T ss_pred EEE-EeCCcHHHHcCCe-EEEEeCCCCCHHHHHHHHHHHHhCCCEE-EeCHHHHHHHHHHhcCHHHHHHHHHHHHHHH--
Confidence 443 4445555555665 7777777 788999999999999865 45442222333332 234444444444444
Q ss_pred HHHHcCCCHHHHHHHHhhcCCCch-hhhc--cccccccCCC-CCCCchhhHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Q 025140 159 HSEKVGLDPNVLVEVVSQGAISAP-MYSL--KGPSMIESLY-PTAFPLKHQQKDLRLALGLAESVSQSTPIAAAANELYK 234 (257)
Q Consensus 159 la~~~Gld~~~~~~~l~~~~~~s~-~~~~--~~~~~~~~~~-~~~f~~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~ 234 (257)
+.+.|+|.+.+++++..+...++ +... ..|.++.+.+ .|++++. ..++.+++.|++.++.+++.+.|+
T Consensus 214 -~~~~Gl~~~~a~~l~~~~~~g~~~~~~~~~~~p~~l~~~v~sp~g~t~-------~~l~~l~~~g~~~~~~~av~~~~~ 285 (322)
T 2izz_A 214 -GVKMGLPRRLAVRLGAQALLGAAKMLLHSEQHPGQLKDNVSSPGGATI-------HALHVLESGGFRSLLINAVEASCI 285 (322)
T ss_dssp -HHHTTCCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHCCTTSHHH-------HHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred -HHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhCCCCCcHHH-------HHHHHHHHCCHHHHHHHHHHHHHH
Confidence 57899999999999988665444 3322 2344444333 5665433 334566789999999999999999
Q ss_pred HHHHCCCCCcc
Q 025140 235 VAKSHGLSDED 245 (257)
Q Consensus 235 ~a~~~g~g~~d 245 (257)
++.+.|.++..
T Consensus 286 ra~e~~~~~~~ 296 (322)
T 2izz_A 286 RTRELQSMADQ 296 (322)
T ss_dssp HHHHHHHC---
T ss_pred HHHHHhhcccc
Confidence 99987765443
No 47
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.68 E-value=2.3e-17 Score=143.16 Aligned_cols=147 Identities=14% Similarity=0.130 Sum_probs=118.0
Q ss_pred CccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEE-EcCCCCHHHHHHHHH-HHHHcCCcEEEecC
Q 025140 12 RCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYV-DVSTVDGDTSKLING-HIKATGASFLEAPV 89 (257)
Q Consensus 12 Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~iv-d~ST~~p~~~~~la~-~~~~~G~~~vdapV 89 (257)
|++.++|+++ +++||+||.|+|++.+++.+++++ ++.+ ++.+++ |+||++|+...+..+ ..+..|.+|+| |+
T Consensus 61 ~i~~~~~~~~-~~~aDlVieavpe~~~vk~~l~~~---l~~~-~~~IlasntSti~~~~~a~~~~~~~r~~G~Hf~~-Pv 134 (293)
T 1zej_A 61 KIEFTTTLEK-VKDCDIVMEAVFEDLNTKVEVLRE---VERL-TNAPLCSNTSVISVDDIAERLDSPSRFLGVHWMN-PP 134 (293)
T ss_dssp GEEEESSCTT-GGGCSEEEECCCSCHHHHHHHHHH---HHTT-CCSCEEECCSSSCHHHHHTTSSCGGGEEEEEECS-ST
T ss_pred CeEEeCCHHH-HcCCCEEEEcCcCCHHHHHHHHHH---HhcC-CCCEEEEECCCcCHHHHHHHhhcccceEeEEecC-cc
Confidence 7888899987 899999999999999999988753 3445 888885 889999986554322 22345899999 77
Q ss_pred CCChHHhhcCceEEEecC---ChhHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 025140 90 SGSKKPAEDGQLIFLAAG---DKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSMMATFSEGLLHSEKVGLD 166 (257)
Q Consensus 90 ~g~~~~a~~g~l~i~~gg---~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gld 166 (257)
.++ .+..++.| +++++++++++++.+|++++++|+. |++||++. ..++|++.++++ |+|
T Consensus 135 ~~~-------~lveiv~g~~t~~~~~~~~~~l~~~lGk~~v~v~d~------fi~Nrll~----~~~~EA~~l~~~-Gv~ 196 (293)
T 1zej_A 135 HVM-------PLVEIVISRFTDSKTVAFVEGFLRELGKEVVVCKGQ------SLVNRFNA----AVLSEASRMIEE-GVR 196 (293)
T ss_dssp TTC-------CEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEESS------CHHHHHHH----HHHHHHHHHHHH-TCC
T ss_pred ccC-------CEEEEECCCCCCHHHHHHHHHHHHHcCCeEEEeccc------ccHHHHHH----HHHHHHHHHHHh-CCC
Confidence 553 35544444 8999999999999999999999865 88888875 479999999999 999
Q ss_pred HHHHHHHHhhcCCCch
Q 025140 167 PNVLVEVVSQGAISAP 182 (257)
Q Consensus 167 ~~~~~~~l~~~~~~s~ 182 (257)
++.+.+++..+.+.++
T Consensus 197 ~e~id~~~~~g~g~~~ 212 (293)
T 1zej_A 197 AEDVDRVWKHHLGLLY 212 (293)
T ss_dssp HHHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHhcCCCCC
Confidence 9999999987765543
No 48
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=99.66 E-value=4e-17 Score=145.93 Aligned_cols=220 Identities=10% Similarity=0.043 Sum_probs=149.8
Q ss_pred CccccCCHHHHHhcCCEEEEecCChHHHHHHhcC-CCcccccCCC-CCEEEEcC-CCCHHHHHHHHHHHHHc-CCcEEEe
Q 025140 12 RCRYQPSPDEVAASCDVTFAMLADPESAMDVACG-KHGAASGMGP-GKGYVDVS-TVDGDTSKLINGHIKAT-GASFLEA 87 (257)
Q Consensus 12 Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~-~~~~~~~l~~-g~~ivd~S-T~~p~~~~~la~~~~~~-G~~~vda 87 (257)
+++.++++.|+++++|+||+|||+ .++++++.. ++++.+.+.+ +++||+++ ++.|++.+.+++.+.++ |.+ +.
T Consensus 72 ~~~~~~~~~~~~~~aDvVilav~~-~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~~~~~~~~~~l~~~~~~~--~~ 148 (366)
T 1evy_A 72 NITFTSDVEKAYNGAEIILFVIPT-QFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPSP--LL 148 (366)
T ss_dssp TEEEESCHHHHHTTCSSEEECCCH-HHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCTTTCCCHHHHHTTTSCGG--GE
T ss_pred ceeeeCCHHHHHcCCCEEEECCCh-HHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCCccccCHHHHHHHHCCCC--cE
Confidence 356678999999999999999995 788888843 2226666667 89999998 68887777777777664 432 23
Q ss_pred cCCCChHHhh-----cCceEEEecCChhHHHHHHHHHHHh--cCCceecCCC---chHHH--------------HHHHHH
Q 025140 88 PVSGSKKPAE-----DGQLIFLAAGDKSLYNTVAPLLDIM--GKSRFYLGDV---GNGAA--------------MKLVVN 143 (257)
Q Consensus 88 pV~g~~~~a~-----~g~l~i~~gg~~~~~~~~~~ll~~~--~~~~~~~G~~---G~a~~--------------~Kl~~n 143 (257)
++..+|..+. ...+.++.+++++.+++++++|+.+ +.++++.+++ +-+.. +|+.+|
T Consensus 149 ~v~~gp~~~~~~~~g~~~~~~~~~~~~~~~~~v~~ll~~~g~g~~~~~~~di~~~~~~k~~~n~~~~~~~~~~~~~~~~n 228 (366)
T 1evy_A 149 SVLAGPSFAIEVATGVFTCVSIASADINVARRLQRIMSTGDRSFVCWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLN 228 (366)
T ss_dssp EEEESSCCHHHHHTTCCEEEEEECSSHHHHHHHHHHHSCTTSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHH
T ss_pred EEEeCCChHHHHHhCCceEEEEecCCHHHHHHHHHHhcCCCCeEEEEEcCCchHHHHHHHHHhHHHHHHHHHhhccCCcc
Confidence 3444444332 3345566677889999999999998 7666666663 22222 345578
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhc----CCCchhhhcc--ccccccCCCCC------CCchhhHHHHHHH
Q 025140 144 MIMGSMMATFSEGLLHSEKVGLDPNVLVEVVSQG----AISAPMYSLK--GPSMIESLYPT------AFPLKHQQKDLRL 211 (257)
Q Consensus 144 ~~~~~~~~~~~Ea~~la~~~Gld~~~~~~~l~~~----~~~s~~~~~~--~~~~~~~~~~~------~f~~~~~~KD~~~ 211 (257)
.+......++.|++.++++.|+|++.+.++...+ ...|+..+++ .+.+..+ +.. .++.....||+..
T Consensus 229 ~~~~~~~~~~~E~~~la~a~Gi~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~e~~~~~~~ 307 (366)
T 1evy_A 229 ARAALIMRGLLEIRDLTAALGGDGSAVFGLAGLGDLQLTCSSELSRNFTVGKKLGKG-LPIEEIQRTSKAVAEGVATADP 307 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCTTTTSTTTHHHHHHHHTCTTSHHHHHHHHHHTT-CCHHHHHC---CCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCccccccccchhheeeecCCCCchHHHHHHHhCC-CCHHHHHHHcCCeeehHHHHHH
Confidence 8888899999999999999999987665421100 0112222221 1222221 110 1223356799999
Q ss_pred HHHHHHhcCCCcHHHHHHHHHHHH
Q 025140 212 ALGLAESVSQSTPIAAAANELYKV 235 (257)
Q Consensus 212 ~~~~a~~~g~~~p~~~~~~~~~~~ 235 (257)
+.++++++|+++|+.+.+.++++.
T Consensus 308 v~~~a~~~gv~~P~~~~v~~~~~~ 331 (366)
T 1evy_A 308 LMRLAKQLKVKMPLCHQIYEIVYK 331 (366)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHS
T ss_pred HHHHHHHhCCCCcHHHHHHHHHHC
Confidence 999999999999999999988753
No 49
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=99.64 E-value=1.7e-16 Score=142.36 Aligned_cols=214 Identities=10% Similarity=0.034 Sum_probs=150.3
Q ss_pred CccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccc----cCCCCCEEEEcCC-CCH--HHHHHHHHHHHHcCCcE
Q 025140 12 RCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAAS----GMGPGKGYVDVST-VDG--DTSKLINGHIKATGASF 84 (257)
Q Consensus 12 Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~----~l~~g~~ivd~ST-~~p--~~~~~la~~~~~~G~~~ 84 (257)
+.+.++++.|+++++|+||+|||+ .++++++ +++.+ .+.++++||++++ +.| ++.+.+++.+.+...
T Consensus 90 ~i~~~~~~~ea~~~aDvVilav~~-~~~~~vl---~~i~~~~~~~l~~~~ivvs~~~Gi~~~~~~~~~l~~~l~~~~~-- 163 (375)
T 1yj8_A 90 NIVAHSDLASVINDADLLIFIVPC-QYLESVL---ASIKESESIKIASHAKAISLTKGFIVKKNQMKLCSNYISDFLN-- 163 (375)
T ss_dssp TEEEESSTHHHHTTCSEEEECCCH-HHHHHHH---HHHTC---CCCCTTCEEEECCCSCEEETTEEECHHHHHHHHSS--
T ss_pred CeEEECCHHHHHcCCCEEEEcCCH-HHHHHHH---HHHhhhhhccCCCCCEEEEeCCccccCCccccCHHHHHHHHcC--
Confidence 466778999999999999999995 7889998 56666 6778999999984 566 344455555554321
Q ss_pred EEecCCCChHHhh-----cCceEEEecCChhHHHHHHHHHHHhcCCceecCCCc---hHHH--------------HHHHH
Q 025140 85 LEAPVSGSKKPAE-----DGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVG---NGAA--------------MKLVV 142 (257)
Q Consensus 85 vdapV~g~~~~a~-----~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~~G~~G---~a~~--------------~Kl~~ 142 (257)
.++++..+|..+. ...+.++.+++++.+++++++|+..+.++++.+++- -+.. +|+.+
T Consensus 164 ~~~~v~~gp~~a~~v~~g~~~~~~~~~~~~~~~~~v~~ll~~~g~~~~~~~di~~~~~~k~l~N~~~~~~g~~~~~~~~~ 243 (375)
T 1yj8_A 164 IPCSALSGANIAMDVAMENFSEATIGGNDKDSLVIWQRVFDLPYFKINCVNETIEVEICGALKNIITLACGFCDGLNLPT 243 (375)
T ss_dssp SCEEEEECSCCHHHHHTTCCEEEEEECSCHHHHHHHHHHHCBTTEEEEEESCSHHHHHHHHHHHHHHHHHHHHHHTTCCH
T ss_pred CCEEEEeCCchHHHHHhCCCeEEEEecCCHHHHHHHHHHhCCCCeEEEEeCCcHHHHHHHHHHHHHHHHHHHHhhccCCh
Confidence 3456666665443 344556667888899999999998887777777652 2323 34457
Q ss_pred HHHHHHHHHHHHHHHHHHHHc--CCCHHHHHH------HHhhcCC-Cchhhhcccccccc-CC-CCC--------CCchh
Q 025140 143 NMIMGSMMATFSEGLLHSEKV--GLDPNVLVE------VVSQGAI-SAPMYSLKGPSMIE-SL-YPT--------AFPLK 203 (257)
Q Consensus 143 n~~~~~~~~~~~Ea~~la~~~--Gld~~~~~~------~l~~~~~-~s~~~~~~~~~~~~-~~-~~~--------~f~~~ 203 (257)
|.+......++.|+..++++. |++++.+.+ ++.+... .++. ..+.+.. ++ ++. .+...
T Consensus 244 n~~~a~~~~~~~E~~~la~a~G~G~~~~~~~~~~g~~dl~~t~~~~~~~~---~~~~~~~~g~~~~~~d~~~~~~~g~~~ 320 (375)
T 1yj8_A 244 NSKSAIIRNGINEMILFGKVFFQKFNENILLESCGFADIITSFLAGRNAK---CSAEFIKSTPKKTWEELENEILKGQKL 320 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSCCCGGGGGSTTTHHHHHHHHSSSSHHH---HHHHHHHHTTSSCHHHHHHHHHTTCCC
T ss_pred hHHHHHHHHHHHHHHHHHHHhccCCCcchhhccccccceeEeeeCCccHH---HHHHHHhcCCCCCHHHHHHhhcCCcEe
Confidence 888888999999999999999 699877643 3333221 1111 1222222 21 111 14455
Q ss_pred hHHHHHHHHHHHHHhcCC--CcHHHHHHHHHHH
Q 025140 204 HQQKDLRLALGLAESVSQ--STPIAAAANELYK 234 (257)
Q Consensus 204 ~~~KD~~~~~~~a~~~g~--~~p~~~~~~~~~~ 234 (257)
...||+..+.+.+++.|+ ++|+.+.+.+++.
T Consensus 321 E~~~~~~~v~~~a~~~gv~~~~P~~~~v~~~~~ 353 (375)
T 1yj8_A 321 QGTVTLKYVYHMIKEKNMTNEFPLFTVLHKISF 353 (375)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGCHHHHHHHHHHH
T ss_pred eHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHh
Confidence 678999999999999999 9999999988864
No 50
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.64 E-value=1e-16 Score=140.01 Aligned_cols=207 Identities=12% Similarity=0.069 Sum_probs=139.3
Q ss_pred CHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHH----cCCcEEEecCCCC-
Q 025140 18 SPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKA----TGASFLEAPVSGS- 92 (257)
Q Consensus 18 s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~----~G~~~vdapV~g~- 92 (257)
+..+.++++|+||+|++++. +++++ +.+.+.+.++++||++++. ++..+.+.+.+.+ .|..++++++++.
T Consensus 76 ~~~~~~~~~D~vil~vk~~~-~~~v~---~~i~~~l~~~~~iv~~~nG-~~~~~~l~~~l~~~~v~~g~~~~~a~~~~pg 150 (317)
T 2qyt_A 76 DNPAEVGTVDYILFCTKDYD-MERGV---AEIRPMIGQNTKILPLLNG-ADIAERMRTYLPDTVVWKGCVYISARKSAPG 150 (317)
T ss_dssp SCHHHHCCEEEEEECCSSSC-HHHHH---HHHGGGEEEEEEEEECSCS-SSHHHHHTTTSCTTTBCEEEEEEEEEEEETT
T ss_pred cCccccCCCCEEEEecCccc-HHHHH---HHHHhhcCCCCEEEEccCC-CCcHHHHHHHCCCCcEEEEEEEEEEEEcCCC
Confidence 45567889999999999876 57777 5666666678899998664 4444566666544 4566889998753
Q ss_pred -hHHhhcCceEEE----ecCChhHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHHHHH-------------------H
Q 025140 93 -KKPAEDGQLIFL----AAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMG-------------------S 148 (257)
Q Consensus 93 -~~~a~~g~l~i~----~gg~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~~~-------------------~ 148 (257)
......|.+.++ -+++.+.+ +++++|+..+.++++.++++.++..|++.|.+.. .
T Consensus 151 ~~~~~~~g~~~~ig~~~~~~~~~~~-~~~~ll~~~g~~~~~~~di~~~~~~Kl~~N~~~~~~~al~g~~~g~~~~~~~~~ 229 (317)
T 2qyt_A 151 LITLEADRELFYFGSGLPEQTDDEV-RLAELLTAAGIRAYNPTDIDWYIMKKFMMISVTATATAYFDKPIGSILTEHEPE 229 (317)
T ss_dssp EEEEEEEEEEEEEECCSSSCCHHHH-HHHHHHHHTTCCEECCSCHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHCHHH
T ss_pred EEEEcCCCceEEEcCCCCCCcCHHH-HHHHHHHHCCCCCEEchHHHHHHHHHHHHHHhhHHHHHHHCCCHHHHHHHHHHH
Confidence 233445554433 22346667 8999999999888888999999999999998753 3
Q ss_pred HHHHHHHHHHHHHHcCCCHH--HHHHHHhhcCCCchhhhccccccccCCCCCCCchhhHHHHHHHHHHHHHhcCCCcHHH
Q 025140 149 MMATFSEGLLHSEKVGLDPN--VLVEVVSQGAISAPMYSLKGPSMIESLYPTAFPLKHQQKDLRLALGLAESVSQSTPIA 226 (257)
Q Consensus 149 ~~~~~~Ea~~la~~~Gld~~--~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~g~~~p~~ 226 (257)
...++.|++.++++.|++++ .+.+.+.... +......+.|. .|+..++..+.- ..+..+.+.++++|+++|+.
T Consensus 230 ~~~~~~E~~~v~~a~G~~~~~~~~~~~~~~~~---~~~~~~~~sm~-~d~~~g~~~E~~-~~~g~~~~~a~~~gv~~P~~ 304 (317)
T 2qyt_A 230 LLSLLEEVAELFRAKYGQVPDDVVQQLLDKQR---KMPPESTSSMH-SDFLQGGSTEVE-TLTGYVVREAEALRVDLPMY 304 (317)
T ss_dssp HHHHHHHHHHHHHHHTSCCCSSHHHHHHHHHH---HC---------------------C-TTTHHHHHHHHHTTCCCHHH
T ss_pred HHHHHHHHHHHHHHcCCCCChHHHHHHHHHHh---ccCCCCCChHH-HHHHcCCccCHH-HHhhHHHHHHHHcCCCCCHH
Confidence 45899999999999999864 6777776521 11122233344 355455442211 13778999999999999999
Q ss_pred HHHHHHHHH
Q 025140 227 AAANELYKV 235 (257)
Q Consensus 227 ~~~~~~~~~ 235 (257)
+.+.++++.
T Consensus 305 ~~~~~~~~~ 313 (317)
T 2qyt_A 305 KRMYRELVS 313 (317)
T ss_dssp HHHHHTTCC
T ss_pred HHHHHHHHH
Confidence 999887653
No 51
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=99.62 E-value=5.4e-15 Score=125.89 Aligned_cols=209 Identities=12% Similarity=0.094 Sum_probs=144.2
Q ss_pred cCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEecCC
Q 025140 11 SRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVS 90 (257)
Q Consensus 11 ~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vdapV~ 90 (257)
.|.+.+.++.++++++|+||+|+| +.++++++ +++.+.+.++.++.++++++++.. .+.+.. +.+++.. +.
T Consensus 44 ~g~~~~~~~~~~~~~~D~vi~~v~-~~~~~~v~---~~l~~~l~~~~vv~~~~gi~~~~l---~~~~~~-~~~~v~~-~p 114 (262)
T 2rcy_A 44 TTLNYMSSNEELARHCDIIVCAVK-PDIAGSVL---NNIKPYLSSKLLISICGGLNIGKL---EEMVGS-ENKIVWV-MP 114 (262)
T ss_dssp SSSEECSCHHHHHHHCSEEEECSC-TTTHHHHH---HHSGGGCTTCEEEECCSSCCHHHH---HHHHCT-TSEEEEE-EC
T ss_pred CceEEeCCHHHHHhcCCEEEEEeC-HHHHHHHH---HHHHHhcCCCEEEEECCCCCHHHH---HHHhCC-CCcEEEE-CC
Confidence 478888999999999999999999 56788888 456666644557778899999743 334432 3233311 12
Q ss_pred CChHHhhcCceEEEecC---ChhHHHHHHHHHHHhcCCceecCCCchHHHHHH--HHHHHHHHHHHHHHHHHHHHHHcCC
Q 025140 91 GSKKPAEDGQLIFLAAG---DKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKL--VVNMIMGSMMATFSEGLLHSEKVGL 165 (257)
Q Consensus 91 g~~~~a~~g~l~i~~gg---~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl--~~n~~~~~~~~~~~Ea~~la~~~Gl 165 (257)
+.|.....| .+++++| +++.+++++++|+.+|. ++++++.......++ +.|.+.+..+.++.|+ +.+.|+
T Consensus 115 ~~p~~~~~g-~~~~~~~~~~~~~~~~~~~~ll~~~G~-~~~~~~~~~~~~~a~~~~~~~~~~~~~~al~~~---~~~~Gl 189 (262)
T 2rcy_A 115 NTPCLVGEG-SFIYCSNKNVNSTDKKYVNDIFNSCGI-IHEIKEKDMDIATAISGCGPAYVYLFIESLIDA---GVKNGL 189 (262)
T ss_dssp CGGGGGTCE-EEEEEECTTCCHHHHHHHHHHHHTSEE-EEECCGGGHHHHHHHTTSHHHHHHHHHHHHHHH---HHHTTC
T ss_pred ChHHHHcCC-eEEEEeCCCCCHHHHHHHHHHHHhCCC-EEEeCHHHccHHHHHHccHHHHHHHHHHHHHHH---HHHcCC
Confidence 334444456 6777766 67889999999999997 889987544455554 3455555555555554 689999
Q ss_pred CHHHHHHHHhhcCCCch-hhh--ccccccccCCC-CCCCchhhHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHCC
Q 025140 166 DPNVLVEVVSQGAISAP-MYS--LKGPSMIESLY-PTAFPLKHQQKDLRLALGLAESVSQSTPIAAAANELYKVAKSHG 240 (257)
Q Consensus 166 d~~~~~~~l~~~~~~s~-~~~--~~~~~~~~~~~-~~~f~~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g 240 (257)
+.+.+++++..+...++ +.. .+.|.++.+.+ .++++.....+++ ++.|++..+.+++.+.|+++.+.+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~t~~~~l~~l-------~~~~~~~~~~~a~~~~~~r~~~~~ 261 (262)
T 2rcy_A 190 SRELSKNLVLQTIKGSVEMVKKSDQPVQQLKDNIVSPGGITAVGLYSL-------EKNSFKYTVMNAVEAACEKSKAMG 261 (262)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHCCTTSHHHHHHHHH-------HHTTHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhcCCCChHHHHHHHHH-------HHCChHHHHHHHHHHHHHHHHHhc
Confidence 99999999887543333 221 34456666554 4667654444444 566888999999999999987754
No 52
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=99.61 E-value=7.9e-16 Score=136.71 Aligned_cols=214 Identities=10% Similarity=0.025 Sum_probs=148.0
Q ss_pred CccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCC-CC--HHHHHHHHHHHHHc-CCcEEEe
Q 025140 12 RCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVST-VD--GDTSKLINGHIKAT-GASFLEA 87 (257)
Q Consensus 12 Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST-~~--p~~~~~la~~~~~~-G~~~vda 87 (257)
+.+.++++.++++++|+||+|+|+ ..+++++ +.+.+.+.++++||++++ +. |++.+.+++.+.++ | .++
T Consensus 77 ~~~~~~~~~~~~~~aD~Vilav~~-~~~~~v~---~~i~~~l~~~~ivv~~~~Gi~~~~~~~~~l~~~l~~~~~---~~~ 149 (354)
T 1x0v_A 77 NVVAVPDVVQAAEDADILIFVVPH-QFIGKIC---DQLKGHLKANATGISLIKGVDEGPNGLKLISEVIGERLG---IPM 149 (354)
T ss_dssp TEEEESSHHHHHTTCSEEEECCCG-GGHHHHH---HHHTTCSCTTCEEEECCCCBCSSSSSCCBHHHHHHHHHT---CCE
T ss_pred CeEEEcCHHHHHcCCCEEEEeCCH-HHHHHHH---HHHHhhCCCCCEEEEECCccCCCCCccccHHHHHHHHcC---CCE
Confidence 355678899999999999999996 6778888 567677778999999987 44 44444555555443 4 246
Q ss_pred cCCCChHHhh---cC--ceEEEecCChhHHHHHHHHHHHhcCCceecCCCchHHHHH-----------------HHHHHH
Q 025140 88 PVSGSKKPAE---DG--QLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMK-----------------LVVNMI 145 (257)
Q Consensus 88 pV~g~~~~a~---~g--~l~i~~gg~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~K-----------------l~~n~~ 145 (257)
++..+|..+. .| ...++.+++.+.+++++++|+..+.++++.+++-.....| +.+|.+
T Consensus 150 ~v~~gp~~a~~v~~g~~~~~~~~~~~~~~~~~v~~ll~~~g~~~~~~~di~~~~~~k~~~N~~~~~~g~~~~~~~~~n~~ 229 (354)
T 1x0v_A 150 SVLMGANIASEVADEKFCETTIGCKDPAQGQLLKELMQTPNFRITVVQEVDTVEICGALKNVVAVGAGFCDGLGFGDNTK 229 (354)
T ss_dssp EEEECSCCHHHHHTTCCEEEEEECSSHHHHHHHHHHHCBTTEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred EEEECCCcHHHHHhcCCceEEEEECCHHHHHHHHHHhCCCCEEEEEcCCchHhHHHHHHHHHHHHHHHHHHHccCCccHH
Confidence 6666666543 34 3455566788889999999998888777777643333333 337877
Q ss_pred HHHHHHHHHHHHHHHHHcCC---CHHHHHH------HHhhcCCCchhhhccccccccCCCCC--------CCchhhHHHH
Q 025140 146 MGSMMATFSEGLLHSEKVGL---DPNVLVE------VVSQGAISAPMYSLKGPSMIESLYPT--------AFPLKHQQKD 208 (257)
Q Consensus 146 ~~~~~~~~~Ea~~la~~~Gl---d~~~~~~------~l~~~~~~s~~~~~~~~~~~~~~~~~--------~f~~~~~~KD 208 (257)
......++.|+..++++.|+ +++.+.+ .+.+... +... ...+.+..+.+.. .+......||
T Consensus 230 ~~~~~~~~~E~~~la~a~G~~~~~~~~~~~~~g~~d~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~E~~~~ 307 (354)
T 1x0v_A 230 AAVIRLGLMEMIAFAKLFCSGPVSSATFLESCGVADLITTCYG-GRNR-KVAEAFARTGKSIEQLEKELLNGQKLQGPET 307 (354)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSCCCGGGGGSTTTHHHHHHHHHH-CHHH-HHHHHHHHHCCCHHHHHHHHSTTCCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCcccccccchHHHHHHhhcc-cccH-HHHHHHHhcCCCHHHHHHhhcCCcEeehHHH
Confidence 78889999999999999999 8876543 2332211 1111 1122332211111 1344456899
Q ss_pred HHHHHHHHHhcCC--CcHHHHHHHHHHH
Q 025140 209 LRLALGLAESVSQ--STPIAAAANELYK 234 (257)
Q Consensus 209 ~~~~~~~a~~~g~--~~p~~~~~~~~~~ 234 (257)
+..+.+.++++|+ ++|+.+.+.+++.
T Consensus 308 ~g~v~~~a~~~gv~~~~P~~~~v~~~~~ 335 (354)
T 1x0v_A 308 ARELYSILQHKGLVDKFPLFMAVYKVCY 335 (354)
T ss_dssp HHHHHHHHHHHTCGGGSHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHh
Confidence 9999999999999 9999999988864
No 53
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.58 E-value=7.6e-16 Score=131.62 Aligned_cols=163 Identities=13% Similarity=0.132 Sum_probs=125.1
Q ss_pred hhhhc-CccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEE
Q 025140 7 AFYYS-RCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 7 ~~~~~-Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~v 85 (257)
.+.+. |.+...++.|+++++|+||+|+|++ .+++++ +.+.+.+.++++||++|+..|.+. +++.+...+..+.
T Consensus 49 ~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~-~~~~v~---~~l~~~~~~~~ivv~~s~~~~~~~--l~~~~~~~~~~~~ 122 (266)
T 3d1l_A 49 ELAQKVEAEYTTDLAEVNPYAKLYIVSLKDS-AFAELL---QGIVEGKREEALMVHTAGSIPMNV--WEGHVPHYGVFYP 122 (266)
T ss_dssp HHHHHTTCEEESCGGGSCSCCSEEEECCCHH-HHHHHH---HHHHTTCCTTCEEEECCTTSCGGG--STTTCSSEEEEEE
T ss_pred HHHHHcCCceeCCHHHHhcCCCEEEEecCHH-HHHHHH---HHHHhhcCCCcEEEECCCCCchHH--HHHHHHhccCcCC
Confidence 35454 8888899999999999999999987 558887 566666778999999999887543 5555544466788
Q ss_pred EecCCCChHHhhcCceEEEe-cCChhHHHHHHHHHHHhcCCceecCCCc---hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 025140 86 EAPVSGSKKPAEDGQLIFLA-AGDKSLYNTVAPLLDIMGKSRFYLGDVG---NGAAMKLVVNMIMGSMMATFSEGLLHSE 161 (257)
Q Consensus 86 dapV~g~~~~a~~g~l~i~~-gg~~~~~~~~~~ll~~~~~~~~~~G~~G---~a~~~Kl~~n~~~~~~~~~~~Ea~~la~ 161 (257)
++|++|++... .+...+++ |++++.+++++++|+.+|.+++++++.+ -....|+++|+. .++..++|+ +++
T Consensus 123 ~~~~~g~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~ea--l~~ 197 (266)
T 3d1l_A 123 MQTFSKQREVD-FKEIPFFIEASSTEDAAFLKAIASTLSNRVYDADSEQRKSLHLAAVFTCNFT--NHMYALAAE--LLK 197 (266)
T ss_dssp CCCC---CCCC-CTTCCEEEEESSHHHHHHHHHHHHTTCSCEEECCHHHHHHHHHHHHHHHHHH--HHHHHHHHH--HHH
T ss_pred ceecCCCchhh-cCCCeEEEecCCHHHHHHHHHHHHhcCCcEEEeCHHHHHHHHHHHHHHHHHH--HHHHHHHHH--HHH
Confidence 99998865533 34445555 8899999999999999998899998765 568899999984 445667775 678
Q ss_pred HcCCCHHHHHHHHhhcCCC
Q 025140 162 KVGLDPNVLVEVVSQGAIS 180 (257)
Q Consensus 162 ~~Gld~~~~~~~l~~~~~~ 180 (257)
+.|+|++.+.+++..+...
T Consensus 198 ~~Gl~~~~~~~l~~~~~~~ 216 (266)
T 3d1l_A 198 KYNLPFDVMLPLIDETARK 216 (266)
T ss_dssp HTTCCGGGGHHHHHHHHHH
T ss_pred HcCCCHHHHHHHHHHHHHH
Confidence 9999999999999876433
No 54
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.56 E-value=4.5e-15 Score=128.26 Aligned_cols=164 Identities=13% Similarity=0.098 Sum_probs=130.6
Q ss_pred hhhhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEE
Q 025140 6 NAFYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 6 ~~~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~v 85 (257)
+.+.+.|.+.. ++.++++++|+||+|+|++. +++++ +++.+.+.++++|||+||..|... +.+ + ..|.+|+
T Consensus 49 ~~~~~~g~~~~-~~~~~~~~aDvVi~av~~~~-~~~v~---~~l~~~l~~~~ivv~~s~~~~~~~--l~~-~-~~~~~~v 119 (286)
T 3c24_A 49 DRLQGMGIPLT-DGDGWIDEADVVVLALPDNI-IEKVA---EDIVPRVRPGTIVLILDAAAPYAG--VMP-E-RADITYF 119 (286)
T ss_dssp HHHHHTTCCCC-CSSGGGGTCSEEEECSCHHH-HHHHH---HHHGGGSCTTCEEEESCSHHHHHT--CSC-C-CTTSEEE
T ss_pred HHHHhcCCCcC-CHHHHhcCCCEEEEcCCchH-HHHHH---HHHHHhCCCCCEEEECCCCchhHH--HHh-h-hCCCeEE
Confidence 34555676554 78889999999999999765 78888 567777788999999988776443 333 2 3478899
Q ss_pred -EecCCCCh------HHhhcCc-------eE--EEecCChhHHHHHHHHHHHhcC---CceecCCCchHHHHHHHHHHHH
Q 025140 86 -EAPVSGSK------KPAEDGQ-------LI--FLAAGDKSLYNTVAPLLDIMGK---SRFYLGDVGNGAAMKLVVNMIM 146 (257)
Q Consensus 86 -dapV~g~~------~~a~~g~-------l~--i~~gg~~~~~~~~~~ll~~~~~---~~~~~G~~G~a~~~Kl~~n~~~ 146 (257)
+.|+++++ .....|. .. +..+++++.+++++++|+.+|. +++++++.+.+...|.++|...
T Consensus 120 ~~~P~~~~~~~~~~~~~~~~g~l~~~~~~~~i~~~~~~~~~~~~~v~~l~~~~G~~~~~~~~v~~~~~~~~~~a~~n~~~ 199 (286)
T 3c24_A 120 IGHPCHPPLFNDETDPAARTDYHGGIAKQAIVCALMQGPEEHYAIGADICETMWSPVTRTHRVTTEQLAILEPGLSEMVA 199 (286)
T ss_dssp EEEECCSCSSCCCCSHHHHTCSSSSSSCEEEEEEEEESCTHHHHHHHHHHHHHTCSEEEEEECCHHHHHHHTTHHHHTTH
T ss_pred ecCCCCccccccccchhhccCcccccccceeeeeccCCCHHHHHHHHHHHHHhcCCcceEEEeChhHhHHHHHHHHHHHH
Confidence 99999988 6667773 22 3357899999999999999998 7899988888888799999888
Q ss_pred HHHHHHHHHHHHHHHHc-CCCHHHHHHHHhhcC
Q 025140 147 GSMMATFSEGLLHSEKV-GLDPNVLVEVVSQGA 178 (257)
Q Consensus 147 ~~~~~~~~Ea~~la~~~-Gld~~~~~~~l~~~~ 178 (257)
..++..++|++..+.+. |+|.+.+.+++..+.
T Consensus 200 ~~~~~~~~eal~~~~~~~Gl~~~~~~~~~~~~~ 232 (286)
T 3c24_A 200 MPFVETMVHAVDECADRYGIDRQAALDFMIGHL 232 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 89999999988776655 999999999988753
No 55
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=99.52 E-value=4.6e-14 Score=123.95 Aligned_cols=151 Identities=12% Similarity=-0.027 Sum_probs=114.3
Q ss_pred ccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEc-CCCCHHHHHHHHHHHH----HcCCcEEEe
Q 025140 13 CRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDV-STVDGDTSKLINGHIK----ATGASFLEA 87 (257)
Q Consensus 13 a~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~-ST~~p~~~~~la~~~~----~~G~~~vda 87 (257)
.++++|+.|++++||+||.|+|.+.+++..++ ..+.+.+.++++|++. |+++++ ++++.+. -.|.+|++.
T Consensus 75 i~~~~~~~eav~~aDlVieavpe~~~~k~~v~--~~l~~~~~~~~Ii~s~tS~i~~~---~la~~~~~~~r~ig~Hp~~P 149 (319)
T 2dpo_A 75 ISSCTNLAEAVEGVVHIQECVPENLDLKRKIF--AQLDSIVDDRVVLSSSSSCLLPS---KLFTGLAHVKQCIVAHPVNP 149 (319)
T ss_dssp EEEECCHHHHTTTEEEEEECCCSCHHHHHHHH--HHHHTTCCSSSEEEECCSSCCHH---HHHTTCTTGGGEEEEEECSS
T ss_pred eEEeCCHHHHHhcCCEEEEeccCCHHHHHHHH--HHHHhhCCCCeEEEEeCCChHHH---HHHHhcCCCCCeEEeecCCc
Confidence 46789999999999999999999877765544 4576778889998755 556664 4444442 236677763
Q ss_pred cCCCChHHhhcCceEEEec--CChhHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 025140 88 PVSGSKKPAEDGQLIFLAA--GDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSMMATFSEGLLHSEKVGL 165 (257)
Q Consensus 88 pV~g~~~~a~~g~l~i~~g--g~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gl 165 (257)
| .. .+.+.++.| ++++++++++++++.+|++++++|..+.|. ++||++. +.++|++.++++.|+
T Consensus 150 ~-~~------~~lveiv~g~~t~~e~~~~~~~l~~~lGk~~v~v~~~~~Gf---i~Nrll~----a~~~EA~~l~~~g~~ 215 (319)
T 2dpo_A 150 P-YY------IPLVELVPHPETSPATVDRTHALMRKIGQSPVRVLKEIDGF---VLNRLQY----AIISEAWRLVEEGIV 215 (319)
T ss_dssp T-TT------CCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEECSSCCTTT---THHHHHH----HHHHHHHHHHHTTSS
T ss_pred h-hh------cceEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEECCCcCCc---hHHHHHH----HHHHHHHHHHHhCCC
Confidence 3 21 223445666 688999999999999999999998766665 5677764 368999999999999
Q ss_pred CHHHHHHHHhhcCCCch
Q 025140 166 DPNVLVEVVSQGAISAP 182 (257)
Q Consensus 166 d~~~~~~~l~~~~~~s~ 182 (257)
|++.+.++++.+.+.+|
T Consensus 216 ~~~~id~a~~~g~g~~~ 232 (319)
T 2dpo_A 216 SPSDLDLVMSDGLGMRY 232 (319)
T ss_dssp CHHHHHHHHHTTHHHHH
T ss_pred CHHHHHHHHHhCCCCCc
Confidence 99999999998766554
No 56
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=99.48 E-value=9.1e-14 Score=123.25 Aligned_cols=218 Identities=12% Similarity=0.089 Sum_probs=137.4
Q ss_pred ccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcC---CcEEE---ec
Q 025140 15 YQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATG---ASFLE---AP 88 (257)
Q Consensus 15 ~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G---~~~vd---ap 88 (257)
..+++.++++++|+||+|+|++.. ++++ +.+.+.+.++++||++.++.++. .++.+.+.+.| +.|++ +|
T Consensus 65 ~~~~~~~~~~~~D~vi~~v~~~~~-~~~~---~~l~~~l~~~~~vv~~~~~~~~~-~~~~~~l~~~~~~~v~~~~~~~~~ 139 (359)
T 1bg6_A 65 LTSDIGLAVKDADVILIVVPAIHH-ASIA---ANIASYISEGQLIILNPGATGGA-LEFRKILRENGAPEVTIGETSSML 139 (359)
T ss_dssp EESCHHHHHTTCSEEEECSCGGGH-HHHH---HHHGGGCCTTCEEEESSCCSSHH-HHHHHHHHHTTCCCCEEEEESSCS
T ss_pred ecCCHHHHHhcCCEEEEeCCchHH-HHHH---HHHHHhCCCCCEEEEcCCCchHH-HHHHHHHHhcCCCCeEEEEecCCc
Confidence 567899999999999999998765 6677 56777788899999996656554 34666677665 45777 66
Q ss_pred CCCChHHhhcCceEEEe------------cCChhHHHHHHHHHHHhc--CC-----------ceecCCC--chHHHHH--
Q 025140 89 VSGSKKPAEDGQLIFLA------------AGDKSLYNTVAPLLDIMG--KS-----------RFYLGDV--GNGAAMK-- 139 (257)
Q Consensus 89 V~g~~~~a~~g~l~i~~------------gg~~~~~~~~~~ll~~~~--~~-----------~~~~G~~--G~a~~~K-- 139 (257)
+.+...+ .+.+.++. +++++.+++++++|..+. .+ +++.+.. +.+...|
T Consensus 140 ~~~~~~g--pg~v~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~di~~k~~~nvn~~~n~~~al~~~~~~~~~~ 217 (359)
T 1bg6_A 140 FTCRSER--PGQVTVNAIKGAMDFACLPAAKAGWALEQIGSVLPQYVAVENVLHTSLTNVNAVMHPLPTLLNAARCESGT 217 (359)
T ss_dssp EEEECSS--TTEEEEEEECSCEEEEEESGGGHHHHHHHHTTTCTTEEECSCHHHHHHCCHHHHHTHHHHHTTHHHHHTTC
T ss_pred EEEEeCC--CCEEEEEEeecceEEEeccccccHHHHHHHHHHhhhcEEcCChHhhhccCCCccccHHHHHhhhchhhcCC
Confidence 6654221 22332221 345556777888776553 11 1111111 3333322
Q ss_pred ----HH---HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhcCCCchh--hhc-cccccccCCCCC-CCchhhHHHH
Q 025140 140 ----LV---VNMIMGSMMATFSEGLLHSEKVGLDPNVLVEVVSQGAISAPM--YSL-KGPSMIESLYPT-AFPLKHQQKD 208 (257)
Q Consensus 140 ----l~---~n~~~~~~~~~~~Ea~~la~~~Gld~~~~~~~l~~~~~~s~~--~~~-~~~~~~~~~~~~-~f~~~~~~KD 208 (257)
+- .+........++.|++.++++.|++++.+.+.+......++. .+. ..+.|......| .+....+.||
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~E~~~va~a~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~sm~~d~~~~~e~~~~~~~~D 297 (359)
T 1bg6_A 218 PFQYYLEGITPSVGSLAEKVDAERIAIAKAFDLNVPSVCEWYKESYGQSPATIYEAVQGNPAYRGIAGPINLNTRYFFED 297 (359)
T ss_dssp CCBHHHHHCCHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHC-------CCSHHHHHHTCGGGTTCBCCSSSCCHHHHHH
T ss_pred ccchhhcCCCHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHhCCCcccHHHHHhcchhhcCCCCCCCCCccceecC
Confidence 11 223356678889999999999999988788877664332221 000 122343322212 2333378999
Q ss_pred H----HHHHHHHHhcCCCcHHHHHHHHHHHHHHHC
Q 025140 209 L----RLALGLAESVSQSTPIAAAANELYKVAKSH 239 (257)
Q Consensus 209 ~----~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~ 239 (257)
+ ..+++.++++|+++|+.+.+.++++.....
T Consensus 298 ~~~~~g~~~~~a~~~gv~~P~~~~l~~~~~~~~~~ 332 (359)
T 1bg6_A 298 VSTGLVPLSELGRAVNVPTPLIDAVLDLISSLIDT 332 (359)
T ss_dssp HHTTHHHHHHHHHHTTCCCHHHHHHHHHHHHHTTC
T ss_pred cCccHHHHHHHHHHcCCCchHHHHHHHHHHHHHCC
Confidence 8 789999999999999999999999887655
No 57
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.36 E-value=6.5e-13 Score=122.74 Aligned_cols=142 Identities=19% Similarity=0.193 Sum_probs=112.0
Q ss_pred cccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEE-EEcCCCCHHHHHHHHHHHH----HcCCcEEE-e
Q 025140 14 RYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGY-VDVSTVDGDTSKLINGHIK----ATGASFLE-A 87 (257)
Q Consensus 14 ~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~i-vd~ST~~p~~~~~la~~~~----~~G~~~vd-a 87 (257)
+.++++ +++++||+||.|||.+.+++..++ ..+.+.+.+++++ .|+||++++. +++.+. -.|.+|.+ +
T Consensus 74 ~~~~~~-~~~~~aDlVIeAVpe~~~vk~~v~--~~l~~~~~~~~IlasntSti~i~~---ia~~~~~p~~~ig~hf~~Pa 147 (483)
T 3mog_A 74 IPVTDI-HALAAADLVIEAASERLEVKKALF--AQLAEVCPPQTLLTTNTSSISITA---IAAEIKNPERVAGLHFFNPA 147 (483)
T ss_dssp EEECCG-GGGGGCSEEEECCCCCHHHHHHHH--HHHHHHSCTTCEEEECCSSSCHHH---HTTTSSSGGGEEEEEECSST
T ss_pred eEeCCH-HHhcCCCEEEEcCCCcHHHHHHHH--HHHHHhhccCcEEEecCCCCCHHH---HHHHccCccceEEeeecChh
Confidence 456777 468999999999999887764443 4566677889988 5799999863 333332 23666766 4
Q ss_pred cCCCChHHhhcCceEEEecC---ChhHHHHHHHHHHHhcCCceecCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 025140 88 PVSGSKKPAEDGQLIFLAAG---DKSLYNTVAPLLDIMGKSRFYLGD-VGNGAAMKLVVNMIMGSMMATFSEGLLHSEKV 163 (257)
Q Consensus 88 pV~g~~~~a~~g~l~i~~gg---~~~~~~~~~~ll~~~~~~~~~~G~-~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~ 163 (257)
|++ .++.+++| +++++++++++++.+|+.++++|+ +| |++||++.. .++|++.++++.
T Consensus 148 ~v~---------~Lvevv~g~~Ts~e~~~~~~~l~~~lGk~~v~v~d~~G-----fi~Nr~l~~----~~~Ea~~l~~~g 209 (483)
T 3mog_A 148 PVM---------KLVEVVSGLATAAEVVEQLCELTLSWGKQPVRCHSTPG-----FIVNRVARP----YYSEAWRALEEQ 209 (483)
T ss_dssp TTC---------CEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEEESCTT-----TTHHHHTHH----HHHHHHHHHHTT
T ss_pred hhC---------CeEEEecCCCCCHHHHHHHHHHHHHhCCEEEEEeccCc-----chHHHHHHH----HHHHHHHHHHhC
Confidence 544 67888888 789999999999999999999987 44 888988766 689999999999
Q ss_pred CCCHHHHHHHHhhcCC
Q 025140 164 GLDPNVLVEVVSQGAI 179 (257)
Q Consensus 164 Gld~~~~~~~l~~~~~ 179 (257)
++|++.+.+++..+.+
T Consensus 210 ~~~~~~id~a~~~~~G 225 (483)
T 3mog_A 210 VAAPEVIDAALRDGAG 225 (483)
T ss_dssp CSCHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHhcCC
Confidence 9999999999987544
No 58
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=99.35 E-value=1.4e-12 Score=107.38 Aligned_cols=128 Identities=16% Similarity=0.236 Sum_probs=103.5
Q ss_pred cCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCC-CC-----------HHHHHHHHHHHHHcCCc
Q 025140 16 QPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVST-VD-----------GDTSKLINGHIKATGAS 83 (257)
Q Consensus 16 ~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST-~~-----------p~~~~~la~~~~~~G~~ 83 (257)
.+++.++++++|+||+|+|. ..+++++ +.+.+.+ +++++||+++ ++ |+..+++++.+. +.+
T Consensus 55 ~~~~~~~~~~~D~Vi~~~~~-~~~~~~~---~~l~~~~-~~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~--~~~ 127 (212)
T 1jay_A 55 GMKNEDAAEACDIAVLTIPW-EHAIDTA---RDLKNIL-REKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLE--SEK 127 (212)
T ss_dssp EEEHHHHHHHCSEEEECSCH-HHHHHHH---HHTHHHH-TTSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHT--CSC
T ss_pred hhhHHHHHhcCCEEEEeCCh-hhHHHHH---HHHHHHc-CCCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCC--CCe
Confidence 46788999999999999995 5577777 4454445 5899999998 43 344677777764 578
Q ss_pred EEEe--cCCCChHHh--hcCceEEEecCC-hhHHHHHHHHHHHh-cCCceecCCCchHHHHHHHHHHHHHHHH
Q 025140 84 FLEA--PVSGSKKPA--EDGQLIFLAAGD-KSLYNTVAPLLDIM-GKSRFYLGDVGNGAAMKLVVNMIMGSMM 150 (257)
Q Consensus 84 ~vda--pV~g~~~~a--~~g~l~i~~gg~-~~~~~~~~~ll~~~-~~~~~~~G~~G~a~~~Kl~~n~~~~~~~ 150 (257)
++++ |+.+..... ..+.++++++|+ ++.+++++++|+.+ |.+++++|+.++++.+|+++|++.....
T Consensus 128 ~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~l~~~~~G~~~~~~~~~~~a~~~k~~~~~~~~~~~ 200 (212)
T 1jay_A 128 VVSALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDAGPLSNSRLVESLTPLILNIMR 200 (212)
T ss_dssp EEECCTTCCHHHHHCTTCCCCEEEEEEESCHHHHHHHHHHHHHSTTEEEEEEESGGGHHHHHTHHHHHHHHHH
T ss_pred EEEEccchHHHHhhCcCCCCCccEEEECCcHHHHHHHHHHHHHcCCCCceeccchhHHHHhcchHHHHHHHHH
Confidence 9999 877666555 677889999986 88999999999999 9988999999999999999999876553
No 59
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=99.31 E-value=3.3e-11 Score=101.75 Aligned_cols=166 Identities=8% Similarity=0.054 Sum_probs=110.8
Q ss_pred hhhhh-cCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEE-EcCCCCHHHHHHHHHHHHHcCCc
Q 025140 6 NAFYY-SRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYV-DVSTVDGDTSKLINGHIKATGAS 83 (257)
Q Consensus 6 ~~~~~-~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~iv-d~ST~~p~~~~~la~~~~~~G~~ 83 (257)
+.+.+ .|.+.+.++.|+++++|+||+|++ +..+++++ +++.+.+.++++|| ++++++++. +.+.+. .+.+
T Consensus 43 ~~~~~~~g~~~~~~~~e~~~~aDvVilav~-~~~~~~v~---~~l~~~l~~~~~vvs~~~gi~~~~---l~~~~~-~~~~ 114 (247)
T 3gt0_A 43 KNASEKYGLTTTTDNNEVAKNADILILSIK-PDLYASII---NEIKEIIKNDAIIVTIAAGKSIES---TENAFN-KKVK 114 (247)
T ss_dssp HHHHHHHCCEECSCHHHHHHHCSEEEECSC-TTTHHHHC------CCSSCTTCEEEECSCCSCHHH---HHHHHC-SCCE
T ss_pred HHHHHHhCCEEeCChHHHHHhCCEEEEEeC-HHHHHHHH---HHHHhhcCCCCEEEEecCCCCHHH---HHHHhC-CCCc
Confidence 34544 499999999999999999999995 67788888 67777788899988 556777654 344442 3445
Q ss_pred EEEecCCCChHHhhcCceEEEe--cCChhHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHHHHHHHHHHHHHHHHH-H
Q 025140 84 FLEAPVSGSKKPAEDGQLIFLA--AGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSMMATFSEGLLH-S 160 (257)
Q Consensus 84 ~vdapV~g~~~~a~~g~l~i~~--gg~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~~~~~~~~~~Ea~~l-a 160 (257)
++-. +...|.....|...++. +++++.+++++++|+.+|. ++++++.---...-+... .-..+..+.|++.. +
T Consensus 115 ~v~~-~p~~p~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~-~~~~~e~~~d~~~a~~g~--gpa~~~~~~eal~~a~ 190 (247)
T 3gt0_A 115 VVRV-MPNTPALVGEGMSALCPNEMVTEKDLEDVLNIFNSFGQ-TEIVSEKLMDVVTSVSGS--SPAYVYMIIEAMADAA 190 (247)
T ss_dssp EEEE-ECCGGGGGTCEEEEEEECTTCCHHHHHHHHHHHGGGEE-EEECCGGGHHHHHHHHHH--HHHHHHHHHHHHHHHH
T ss_pred EEEE-eCChHHHHcCceEEEEeCCCCCHHHHHHHHHHHHhCCC-EEEeCHHHccHHHHHhcc--HHHHHHHHHHHHHHHH
Confidence 5432 12333333445555555 3788999999999999998 677754221111112211 11345567787777 8
Q ss_pred HHcCCCHHHHHHHHhhcCCCchh
Q 025140 161 EKVGLDPNVLVEVVSQGAISAPM 183 (257)
Q Consensus 161 ~~~Gld~~~~~~~l~~~~~~s~~ 183 (257)
.+.|+|++..++++..+...++.
T Consensus 191 ~~~Gl~~~~a~~~~~~~~~gs~~ 213 (247)
T 3gt0_A 191 VLDGMPRNQAYKFAAQAVLGSAK 213 (247)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999887655543
No 60
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.27 E-value=1.2e-11 Score=113.21 Aligned_cols=140 Identities=11% Similarity=0.150 Sum_probs=105.1
Q ss_pred cccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEE-EcCCCCHHHHHHHHHHHH----HcCCcEEEec
Q 025140 14 RYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYV-DVSTVDGDTSKLINGHIK----ATGASFLEAP 88 (257)
Q Consensus 14 ~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~iv-d~ST~~p~~~~~la~~~~----~~G~~~vdap 88 (257)
++++++. ++++||+||.|||.+.+++..++ ..+.+.+.++++|+ ++||++++ ++++.+. -.|.+|++ |
T Consensus 120 ~~t~dl~-al~~aDlVIeAVpe~~~vk~~v~--~~l~~~~~~~aIlasnTSsl~i~---~ia~~~~~p~r~iG~Hffn-P 192 (460)
T 3k6j_A 120 KITSDFH-KLSNCDLIVESVIEDMKLKKELF--ANLENICKSTCIFGTNTSSLDLN---EISSVLRDPSNLVGIHFFN-P 192 (460)
T ss_dssp EEESCGG-GCTTCSEEEECCCSCHHHHHHHH--HHHHTTSCTTCEEEECCSSSCHH---HHHTTSSSGGGEEEEECCS-S
T ss_pred EEeCCHH-HHccCCEEEEcCCCCHHHHHHHH--HHHHhhCCCCCEEEecCCChhHH---HHHHhccCCcceEEEEecc-h
Confidence 4678884 78999999999998877765555 45667788899986 56777775 3444432 13666766 5
Q ss_pred CCCChHHhhcCceEEEecC---ChhHHHHHHHHHHHhcCCceecCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 025140 89 VSGSKKPAEDGQLIFLAAG---DKSLYNTVAPLLDIMGKSRFYLGD-VGNGAAMKLVVNMIMGSMMATFSEGLLHSEKVG 164 (257)
Q Consensus 89 V~g~~~~a~~g~l~i~~gg---~~~~~~~~~~ll~~~~~~~~~~G~-~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~G 164 (257)
+. ...++-++.| +++++++++++++.+++.++++++ +| .++|+++.. .++|++.++++.|
T Consensus 193 v~-------~m~LvEIv~g~~Ts~e~~~~~~~l~~~lGk~~v~v~d~pG-----fi~Nril~~----~~~EA~~l~~~~G 256 (460)
T 3k6j_A 193 AN-------VIRLVEIIYGSHTSSQAIATAFQACESIKKLPVLVGNCKS-----FVFNRLLHV----YFDQSQKLMYEYG 256 (460)
T ss_dssp TT-------TCCEEEEECCSSCCHHHHHHHHHHHHHTTCEEEEESSCCH-----HHHHHHHHH----HHHHHHHHHHTSC
T ss_pred hh-------hCCEEEEEeCCCCCHHHHHHHHHHHHHhCCEEEEEecccH-----HHHHHHHHH----HHHHHHHHHHHcC
Confidence 54 2345545544 789999999999999999999987 44 366776653 5899999999999
Q ss_pred CCHHHHHHHHhh
Q 025140 165 LDPNVLVEVVSQ 176 (257)
Q Consensus 165 ld~~~~~~~l~~ 176 (257)
+|++.+.+++..
T Consensus 257 a~~e~ID~a~~~ 268 (460)
T 3k6j_A 257 YLPHQIDKIITN 268 (460)
T ss_dssp CCHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 999999999873
No 61
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=99.27 E-value=1.5e-11 Score=106.84 Aligned_cols=144 Identities=13% Similarity=0.165 Sum_probs=104.7
Q ss_pred ccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEE-cCCCCHHHHHHHHHHHH----HcCCcEEEe
Q 025140 13 CRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVD-VSTVDGDTSKLINGHIK----ATGASFLEA 87 (257)
Q Consensus 13 a~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd-~ST~~p~~~~~la~~~~----~~G~~~vda 87 (257)
.+.++++.|++++||+||+|+|.+.+++..++ +.+.+.+.++++|+. +|+++++. +++.+. -.|.+|.+
T Consensus 88 i~~~~~~~~~~~~aD~Vi~avp~~~~~~~~v~--~~l~~~~~~~~iv~s~ts~i~~~~---l~~~~~~~~~~~g~h~~~- 161 (302)
T 1f0y_A 88 IATSTDAASVVHSTDLVVEAIVENLKVKNELF--KRLDKFAAEHTIFASNTSSLQITS---IANATTRQDRFAGLHFFN- 161 (302)
T ss_dssp EEEESCHHHHTTSCSEEEECCCSCHHHHHHHH--HHHTTTSCTTCEEEECCSSSCHHH---HHTTSSCGGGEEEEEECS-
T ss_pred eEEecCHHHhhcCCCEEEEcCcCcHHHHHHHH--HHHHhhCCCCeEEEECCCCCCHHH---HHHhcCCcccEEEEecCC-
Confidence 45678999999999999999998876654333 345566777888874 56777653 333332 12444443
Q ss_pred cCCCChHHhhcCceEEEecC---ChhHHHHHHHHHHHhcCCceecCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 025140 88 PVSGSKKPAEDGQLIFLAAG---DKSLYNTVAPLLDIMGKSRFYLGD-VGNGAAMKLVVNMIMGSMMATFSEGLLHSEKV 163 (257)
Q Consensus 88 pV~g~~~~a~~g~l~i~~gg---~~~~~~~~~~ll~~~~~~~~~~G~-~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~ 163 (257)
|+. .+.+..+++| +++++++++++++.+|+.++++++ +| +++||++. ..++|++.++++.
T Consensus 162 P~~-------~~~~~~i~~g~~~~~e~~~~~~~l~~~~G~~~v~~~~~~g-----~i~nr~l~----~~~~Ea~~l~~~g 225 (302)
T 1f0y_A 162 PVP-------VMKLVEVIKTPMTSQKTFESLVDFSKALGKHPVSCKDTPG-----FIVNRLLV----PYLMEAIRLYERG 225 (302)
T ss_dssp STT-------TCCEEEEECCTTCCHHHHHHHHHHHHHTTCEEEEECSCTT-----TTHHHHHH----HHHHHHHHHHHTT
T ss_pred Ccc-------cCceEEEeCCCCCCHHHHHHHHHHHHHcCCceEEecCccc-----ccHHHHHH----HHHHHHHHHHHcC
Confidence 321 2445556665 789999999999999998888877 44 67777764 4689999999999
Q ss_pred CCCHHHHHHHHhhcC
Q 025140 164 GLDPNVLVEVVSQGA 178 (257)
Q Consensus 164 Gld~~~~~~~l~~~~ 178 (257)
|++++.+.+++..+.
T Consensus 226 ~~~~~~id~~~~~g~ 240 (302)
T 1f0y_A 226 DASKEDIDTAMKLGA 240 (302)
T ss_dssp SSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhCC
Confidence 999999998887653
No 62
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=98.90 E-value=6.2e-13 Score=109.28 Aligned_cols=122 Identities=17% Similarity=0.202 Sum_probs=94.3
Q ss_pred hhhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEE
Q 025140 7 AFYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE 86 (257)
Q Consensus 7 ~~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vd 86 (257)
.+...|++.. ++.|+++++|+||+|+|.. ++++++ ++. .+.++++|||+++..|... +.+.+..+++
T Consensus 56 ~~~~~g~~~~-~~~~~~~~aDvVilav~~~-~~~~v~----~l~-~~~~~~ivI~~~~G~~~~~------~~~~~~~~l~ 122 (201)
T 2yjz_A 56 SLLPRGAEVL-CYSEAASRSDVIVLAVHRE-HYDFLA----ELA-DSLKGRVLIDVSNNQKMNQ------YPESNAEYLA 122 (201)
Confidence 3555677766 8889999999999999975 677776 233 3457899999999988543 3445567777
Q ss_pred ecCCCChH----------HhhcCce-----EEEecCChhHHHHHHHHHHHhcCCceecCCCchHHHHHHH
Q 025140 87 APVSGSKK----------PAEDGQL-----IFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLV 141 (257)
Q Consensus 87 apV~g~~~----------~a~~g~l-----~i~~gg~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~ 141 (257)
.|+.+.+- ..+.|.+ .+++|++++.+++++++|+.+|.+++|+|++|+|+.+|.+
T Consensus 123 ~~~~~~~vvra~~n~~a~~~~~g~l~g~~~~~~~g~~~~~~~~v~~ll~~~G~~~~~~G~l~~a~~~e~~ 192 (201)
T 2yjz_A 123 QLVPGAHVVKAFNTISAWALQSGTLDASRQVFVCGNDSKAKDRVMDIARTLGLTPLDQGSLVAAKEIENY 192 (201)
Confidence 77765433 3344553 6788889899999999999999999999999999999965
No 63
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.23 E-value=6.8e-12 Score=107.82 Aligned_cols=150 Identities=15% Similarity=0.079 Sum_probs=105.7
Q ss_pred cCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEecCC
Q 025140 11 SRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVS 90 (257)
Q Consensus 11 ~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vdapV~ 90 (257)
.|. .+.++.|+++++|+||+|+|++. ..+++ +++. .++++||++|+..|.+.. .+. ..+..+..+|++
T Consensus 45 ~g~-~~~~~~~~~~~~DvVilav~~~~-~~~v~---~~l~---~~~~ivi~~s~~~~~~~l--~~~--~~~~~~p~~~~~ 112 (276)
T 2i76_A 45 YGG-KAATLEKHPELNGVVFVIVPDRY-IKTVA---NHLN---LGDAVLVHCSGFLSSEIF--KKS--GRASIHPNFSFS 112 (276)
T ss_dssp TCC-CCCSSCCCCC---CEEECSCTTT-HHHHH---TTTC---CSSCCEEECCSSSCGGGG--CSS--SEEEEEECSCC-
T ss_pred cCC-ccCCHHHHHhcCCEEEEeCChHH-HHHHH---HHhc---cCCCEEEECCCCCcHHHH--HHh--hccccchhhhcC
Confidence 366 77888888899999999999876 67777 4443 578999999977665432 111 122344567788
Q ss_pred CChHHhh-cCceEEEecCChhHHHHHHHHHHHhcCCceecCCCch---HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 025140 91 GSKKPAE-DGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGN---GAAMKLVVNMIMGSMMATFSEGLLHSEKVGLD 166 (257)
Q Consensus 91 g~~~~a~-~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~~G~~G~---a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gld 166 (257)
++|.... .+.++++++++++.++.++++|+.+|.+++++++.+. -...++++|++. ..+.|+..++.+.|++
T Consensus 113 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lG~~~~~v~~~~~~~~~~~~~l~~n~~~----~~~~~a~~~~~~~Gl~ 188 (276)
T 2i76_A 113 SLEKALEMKDQIVFGLEGDERGLPIVKKIAEEISGKYFVIPSEKKKAYHLAAVIASNFPV----ALAYLSKRIYTLLGLD 188 (276)
T ss_dssp -CTTGGGCGGGCCEEECCCTTTHHHHHHHHHHHCSCEEECCGGGHHHHHHHHHHHHTTHH----HHHHHHHHHHHTTTCS
T ss_pred CCchhHHHhCCCeEEEEeChHHHHHHHHHHHHhCCCEEEECHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHcCCC
Confidence 8676655 5667788888888899999999999988999986543 244577777554 3567788899999999
Q ss_pred HH--HHHHHHhh
Q 025140 167 PN--VLVEVVSQ 176 (257)
Q Consensus 167 ~~--~~~~~l~~ 176 (257)
.+ .+.+++..
T Consensus 189 ~~~a~~~~l~~~ 200 (276)
T 2i76_A 189 EPELLIHTLMKG 200 (276)
T ss_dssp CHHHHHHHHHHH
T ss_pred hHHHHHHHHHHH
Confidence 87 55555554
No 64
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.23 E-value=8.5e-11 Score=102.90 Aligned_cols=135 Identities=13% Similarity=0.111 Sum_probs=107.8
Q ss_pred hhhhhcCc--cccCCHHH-HHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCC
Q 025140 6 NAFYYSRC--RYQPSPDE-VAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGA 82 (257)
Q Consensus 6 ~~~~~~Ga--~~~~s~~e-a~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~ 82 (257)
+.+.+.|. ..++++.| ++++||+||+|+|.. .+.+++ +++.+.+.++++|+|++++.+...+.+.+.+.+
T Consensus 72 ~~a~~~G~~~~~~~~~~~~~~~~aDvVilavp~~-~~~~vl---~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~--- 144 (314)
T 3ggo_A 72 SKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR-TFREIA---KKLSYILSEDATVTDQGSVKGKLVYDLENILGK--- 144 (314)
T ss_dssp HHHHHTTSCSEEESCTTGGGGGCCSEEEECSCGG-GHHHHH---HHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG---
T ss_pred HHHHHCCCcchhcCCHHHHhhccCCEEEEeCCHH-HHHHHH---HHHhhccCCCcEEEECCCCcHHHHHHHHHhcCC---
Confidence 34566777 46788999 999999999999975 456777 567777889999999999998888888877643
Q ss_pred cEEE-ecCCCC----hHHhh----cCceEEEec---CChhHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHHHHH
Q 025140 83 SFLE-APVSGS----KKPAE----DGQLIFLAA---GDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMG 147 (257)
Q Consensus 83 ~~vd-apV~g~----~~~a~----~g~l~i~~g---g~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~~~ 147 (257)
+|+. .|+.|+ |..+. .|..++++. ++++.+++++++|+.+|.+++++++..-...++++..+-..
T Consensus 145 ~~v~~hPm~G~e~sG~~~A~~~Lf~g~~~il~~~~~~~~~~~~~v~~l~~~~G~~v~~~~~~~hD~~~a~~s~lph~ 221 (314)
T 3ggo_A 145 RFVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTDKKRLKLVKRVWEDVGGVVEYMSPELHDYVFGVVSHLPHA 221 (314)
T ss_dssp GEECEEECCCCCCCSGGGCCTTTTTTCEEEECCCTTSCHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHH
T ss_pred CEEecCcccCCcccchhhhhhhhhcCCEEEEEeCCCCCHHHHHHHHHHHHHcCCEEEEcCHHHHHHHHHHHHHHHHH
Confidence 8887 699884 55444 577788873 67899999999999999999999887777888877755433
No 65
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.22 E-value=9.4e-11 Score=100.60 Aligned_cols=137 Identities=14% Similarity=0.114 Sum_probs=107.4
Q ss_pred hhhhcCcc--ccCCHHHHHh-cCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCc
Q 025140 7 AFYYSRCR--YQPSPDEVAA-SCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGAS 83 (257)
Q Consensus 7 ~~~~~Ga~--~~~s~~ea~~-~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~ 83 (257)
.+.+.|.. ...++.++++ ++|+||+|+|.. ...+++ +.+.+.+.++++|++++++.+...+.+.+.+.+ .
T Consensus 41 ~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~-~~~~v~---~~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~---~ 113 (281)
T 2g5c_A 41 KAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR-TFREIA---KKLSYILSEDATVTDQGSVKGKLVYDLENILGK---R 113 (281)
T ss_dssp HHHHTTSCSEEESCGGGGGGTCCSEEEECSCHH-HHHHHH---HHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG---G
T ss_pred HHHHCCCcccccCCHHHHhcCCCCEEEEcCCHH-HHHHHH---HHHHhhCCCCcEEEECCCCcHHHHHHHHHhccc---c
Confidence 34556764 3678889999 999999999975 556777 456666788999999999998888888877764 2
Q ss_pred EEE-ecCCC----ChHHhh----cCceEEEe---cCChhHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHHHHHHHH
Q 025140 84 FLE-APVSG----SKKPAE----DGQLIFLA---AGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSMM 150 (257)
Q Consensus 84 ~vd-apV~g----~~~~a~----~g~l~i~~---gg~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~~~~~~ 150 (257)
|++ .|+++ +|..+. .+..++++ +++++.+++++++|+.+|.+++++++...+..+|++.|......+
T Consensus 114 ~v~~~p~~~~~~~gp~~a~~~l~~g~~~~~~~~~~~~~~~~~~v~~l~~~~g~~~~~~~~~~~d~~~~~~~~~~~~~a~ 192 (281)
T 2g5c_A 114 FVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTDKKRLKLVKRVWEDVGGVVEYMSPELHDYVFGVVSHLPHAVAF 192 (281)
T ss_dssp EECEEEECCCSCCSGGGCCSSTTTTCEEEECCCSSSCHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHHH
T ss_pred ceeeccccCCccCChhhhhhHHhCCCCEEEecCCCCCHHHHHHHHHHHHHcCCEEEEcCHHHHHHHHHHHHHHHHHHHH
Confidence 777 57776 345543 67767777 788899999999999999988889887779999999988755433
No 66
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.19 E-value=1.8e-10 Score=98.68 Aligned_cols=157 Identities=10% Similarity=0.099 Sum_probs=112.5
Q ss_pred hhhhcCcc--ccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcE
Q 025140 7 AFYYSRCR--YQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASF 84 (257)
Q Consensus 7 ~~~~~Ga~--~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ 84 (257)
.+.+.|.. ...++.++ +++|+||+|+|. ..+.+++ +.+.+.+.++++||+++++.+...+.+.+.+ .++
T Consensus 38 ~~~~~g~~~~~~~~~~~~-~~~D~vi~av~~-~~~~~~~---~~l~~~~~~~~~vv~~~~~~~~~~~~~~~~~----~~~ 108 (279)
T 2f1k_A 38 KAVERQLVDEAGQDLSLL-QTAKIIFLCTPI-QLILPTL---EKLIPHLSPTAIVTDVASVKTAIAEPASQLW----SGF 108 (279)
T ss_dssp HHHHTTSCSEEESCGGGG-TTCSEEEECSCH-HHHHHHH---HHHGGGSCTTCEEEECCSCCHHHHHHHHHHS----TTC
T ss_pred HHHhCCCCccccCCHHHh-CCCCEEEEECCH-HHHHHHH---HHHHhhCCCCCEEEECCCCcHHHHHHHHHHh----CCE
Confidence 35555663 56788888 999999999995 5677787 5666777889999999999988766665543 278
Q ss_pred EEe-cCCCC----hHHhh----cCceEEEec---CChhHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHHHHHHHHHH
Q 025140 85 LEA-PVSGS----KKPAE----DGQLIFLAA---GDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSMMAT 152 (257)
Q Consensus 85 vda-pV~g~----~~~a~----~g~l~i~~g---g~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~~~~~~~~ 152 (257)
+++ |+.|+ |..+. .+..++++. ++++.+++++++|+.++.+++++++.......|++.|...+... +
T Consensus 109 ~~~~p~~g~~~~gp~~a~~~~~~g~~~~~~~~~~~~~~~~~~v~~l~~~~g~~~~~~~~~~~~~~~~~~~~~p~~i~~-a 187 (279)
T 2f1k_A 109 IGGHPMAGTAAQGIDGAEENLFVNAPYVLTPTEYTDPEQLACLRSVLEPLGVKIYLCTPADHDQAVAWISHLPVMVSA-A 187 (279)
T ss_dssp EEEEECCCCSCSSGGGCCTTTTTTCEEEEEECTTCCHHHHHHHHHHHGGGTCEEEECCHHHHHHHHHHHTHHHHHHHH-H
T ss_pred eecCcccCCccCCHHHHhHHHhCCCcEEEecCCCCCHHHHHHHHHHHHHcCCEEEEcCHHHHHHHHHHHhhHHHHHHH-H
Confidence 887 88753 44332 455565553 57888999999999999888899888889999999997544333 3
Q ss_pred HHHHHHHHHHcCCC--HHHHHHHHhh
Q 025140 153 FSEGLLHSEKVGLD--PNVLVEVVSQ 176 (257)
Q Consensus 153 ~~Ea~~la~~~Gld--~~~~~~~l~~ 176 (257)
+.++ +...|++ .+....++..
T Consensus 188 l~~~---~~~~~~~~~~~~~~~l~~~ 210 (279)
T 2f1k_A 188 LIQA---CAGEKDGDILKLAQNLASS 210 (279)
T ss_dssp HHHH---HHTCSCHHHHHHHHHHCCH
T ss_pred HHHH---HHhcccccchhHHHhhcCC
Confidence 4443 3356665 4555554443
No 67
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.18 E-value=2.7e-11 Score=116.98 Aligned_cols=138 Identities=17% Similarity=0.169 Sum_probs=102.1
Q ss_pred ccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEE-EcCCCCHHHHHHHHHHHHH----cCCcEEEe
Q 025140 13 CRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYV-DVSTVDGDTSKLINGHIKA----TGASFLEA 87 (257)
Q Consensus 13 a~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~iv-d~ST~~p~~~~~la~~~~~----~G~~~vda 87 (257)
.+.++++ +++++||+||.|||.+.+++..++ ..+.+.+.++++++ ++||++++. +++.+.. .|.+|++
T Consensus 382 i~~~~d~-~~~~~aDlVIeaV~e~~~vk~~v~--~~l~~~~~~~~IlasntStl~i~~---la~~~~~~~~~ig~hf~~- 454 (715)
T 1wdk_A 382 IRPTLSY-GDFGNVDLVVEAVVENPKVKQAVL--AEVENHVREDAILASNTSTISISL---LAKALKRPENFVGMHFFN- 454 (715)
T ss_dssp EEEESSS-TTGGGCSEEEECCCSCHHHHHHHH--HHHHTTSCTTCEEEECCSSSCHHH---HGGGCSCGGGEEEEECCS-
T ss_pred eEEECCH-HHHCCCCEEEEcCCCCHHHHHHHH--HHHHhhCCCCeEEEeCCCCCCHHH---HHHHhcCccceEEEEccC-
Confidence 3456788 789999999999999988876555 34666777888887 467777753 4443321 3556655
Q ss_pred cCCCChHHhhcCceEEEecC---ChhHHHHHHHHHHHhcCCceecCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 025140 88 PVSGSKKPAEDGQLIFLAAG---DKSLYNTVAPLLDIMGKSRFYLGD-VGNGAAMKLVVNMIMGSMMATFSEGLLHSEKV 163 (257)
Q Consensus 88 pV~g~~~~a~~g~l~i~~gg---~~~~~~~~~~ll~~~~~~~~~~G~-~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~ 163 (257)
|+.. +.++.++.| +++++++++++++.+|+.++++|+ +|. ++||++. ..++|++.++++
T Consensus 455 P~~~-------~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~d~~Gf-----i~Nril~----~~~~Ea~~l~~~- 517 (715)
T 1wdk_A 455 PVHM-------MPLVEVIRGEKSSDLAVATTVAYAKKMGKNPIVVNDCPGF-----LVNRVLF----PYFGGFAKLVSA- 517 (715)
T ss_dssp STTT-------CCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEEESCTTT-----THHHHHH----HHHHHHHHHHHT-
T ss_pred Cccc-------CceEEEEECCCCCHHHHHHHHHHHHHhCCEeEEEcCCCCh-----hhhHHHH----HHHHHHHHHHHC-
Confidence 5432 344544544 789999999999999999999987 553 5666554 468999999997
Q ss_pred CCCHHHHHHHH
Q 025140 164 GLDPNVLVEVV 174 (257)
Q Consensus 164 Gld~~~~~~~l 174 (257)
|+|++.+.+++
T Consensus 518 G~~~~~id~~~ 528 (715)
T 1wdk_A 518 GVDFVRIDKVM 528 (715)
T ss_dssp TCCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 99999999999
No 68
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.17 E-value=3.7e-10 Score=98.00 Aligned_cols=146 Identities=13% Similarity=0.125 Sum_probs=109.0
Q ss_pred CHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEe-cCCCChHHh
Q 025140 18 SPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEA-PVSGSKKPA 96 (257)
Q Consensus 18 s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vda-pV~g~~~~a 96 (257)
++.+++++||+||+|||... +.+++ +.+.+.+.++++|+|++++.....+.+.+. .+.+|+.+ |++|+....
T Consensus 58 ~~~~~~~~aDvVilavp~~~-~~~vl---~~l~~~l~~~~iv~~~~svk~~~~~~~~~~---~~~~~v~~hP~~g~~~~~ 130 (298)
T 2pv7_A 58 VAESILANADVVIVSVPINL-TLETI---ERLKPYLTENMLLADLTSVKREPLAKMLEV---HTGAVLGLHPMFGADIAS 130 (298)
T ss_dssp GHHHHHTTCSEEEECSCGGG-HHHHH---HHHGGGCCTTSEEEECCSCCHHHHHHHHHH---CSSEEEEEEECSCTTCSC
T ss_pred CHHHHhcCCCEEEEeCCHHH-HHHHH---HHHHhhcCCCcEEEECCCCCcHHHHHHHHh---cCCCEEeeCCCCCCCchh
Confidence 67889999999999999765 77888 567677788999999999998877666544 34688876 898877656
Q ss_pred hcCceEEEecC-ChhHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Q 025140 97 EDGQLIFLAAG-DKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSMMATFSEGLLHSEKVGLDPNVLVEVV 174 (257)
Q Consensus 97 ~~g~l~i~~gg-~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gld~~~~~~~l 174 (257)
..|..++++.+ +++.+++++++|+.+|.+++++++......++++.+......+. +.|++. +.|++.+..++..
T Consensus 131 ~~g~~~~l~~~~~~~~~~~v~~l~~~~G~~~~~~~~~~~d~~~a~~~~~p~~~a~~-l~~~l~---~~g~~~~~~~~la 205 (298)
T 2pv7_A 131 MAKQVVVRCDGRFPERYEWLLEQIQIWGAKIYQTNATEHDHNMTYIQALRHFSTFA-NGLHLS---KQPINLANLLALS 205 (298)
T ss_dssp CTTCEEEEEEEECGGGTHHHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHHHH-HHHHHT---TSSCCHHHHHHTC
T ss_pred hcCCeEEEecCCCHHHHHHHHHHHHHcCCEEEECCHHHHHHHHHHHHHHHHHHHHH-HHHHHH---hcCCCHHHHHhhc
Confidence 56766666654 67889999999999999888888766688888888765443332 344332 4788876555443
No 69
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.15 E-value=4.9e-10 Score=96.54 Aligned_cols=151 Identities=12% Similarity=0.097 Sum_probs=108.6
Q ss_pred ccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEE-cCCCCHHHHHHHHHHHHHcCCcEEEecCCC
Q 025140 13 CRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVD-VSTVDGDTSKLINGHIKATGASFLEAPVSG 91 (257)
Q Consensus 13 a~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd-~ST~~p~~~~~la~~~~~~G~~~vdapV~g 91 (257)
.+.++++.|++++||+||.|+|...+++..++ +.+.+.+.+++++++ +|+++++ ++++.+. +..+++-.-.+.
T Consensus 73 i~~~~~~~~~~~~aDlVi~av~~~~~~~~~v~--~~l~~~~~~~~il~s~tS~~~~~---~la~~~~-~~~~~ig~h~~~ 146 (283)
T 4e12_A 73 IRYSDDLAQAVKDADLVIEAVPESLDLKRDIY--TKLGELAPAKTIFATNSSTLLPS---DLVGYTG-RGDKFLALHFAN 146 (283)
T ss_dssp CEEESCHHHHTTTCSEEEECCCSCHHHHHHHH--HHHHHHSCTTCEEEECCSSSCHH---HHHHHHS-CGGGEEEEEECS
T ss_pred eEEeCCHHHHhccCCEEEEeccCcHHHHHHHH--HHHHhhCCCCcEEEECCCCCCHH---HHHhhcC-CCcceEEEccCC
Confidence 46789999999999999999998765544433 456667788999995 5566553 4454443 223444333222
Q ss_pred ChHHhhcCceEEEecC---ChhHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Q 025140 92 SKKPAEDGQLIFLAAG---DKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSMMATFSEGLLHSEKVGLDPN 168 (257)
Q Consensus 92 ~~~~a~~g~l~i~~gg---~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gld~~ 168 (257)
| +..+.++.++.| +++++++++++++.+++.+++++..+.|. ++|+++. ..+.|++.+.++.+++++
T Consensus 147 -p--~~~~~lvevv~~~~t~~~~~~~~~~l~~~~g~~~v~v~~~~~g~---i~nr~~~----~~~~ea~~l~~~g~~~~~ 216 (283)
T 4e12_A 147 -H--VWVNNTAEVMGTTKTDPEVYQQVVEFASAIGMVPIELKKEKAGY---VLNSLLV----PLLDAAAELLVDGIADPE 216 (283)
T ss_dssp -S--TTTSCEEEEEECTTSCHHHHHHHHHHHHHTTCEEEECSSCCTTT---THHHHHH----HHHHHHHHHHHTTSCCHH
T ss_pred -C--cccCceEEEEeCCCCCHHHHHHHHHHHHHcCCEEEEEecCCCCE---EehHHHH----HHHHHHHHHHHhCCCCHH
Confidence 2 335667777776 68999999999999999999995433333 4566654 468999999999999999
Q ss_pred HHHHHHhhcCC
Q 025140 169 VLVEVVSQGAI 179 (257)
Q Consensus 169 ~~~~~l~~~~~ 179 (257)
++.+++..+.+
T Consensus 217 ~id~~~~~~~g 227 (283)
T 4e12_A 217 TIDKTWRIGTG 227 (283)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHhccC
Confidence 99999987543
No 70
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.13 E-value=4.2e-11 Score=115.70 Aligned_cols=139 Identities=16% Similarity=0.151 Sum_probs=103.1
Q ss_pred cccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEE-cCCCCHHHHHHHHHHHHH----cCCcEEEec
Q 025140 14 RYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVD-VSTVDGDTSKLINGHIKA----TGASFLEAP 88 (257)
Q Consensus 14 ~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd-~ST~~p~~~~~la~~~~~----~G~~~vdap 88 (257)
+.++++ +++++||+||.|||.+.+++..++ ..+.+.+.++.++++ +||+++++ +++.+.. .|.+|++ |
T Consensus 381 ~~~~d~-~~~~~aDlVIeaVpe~~~vk~~v~--~~l~~~~~~~~IlasntStl~i~~---la~~~~~p~~~iG~hf~~-P 453 (725)
T 2wtb_A 381 KGSLDY-ESFRDVDMVIEAVIENISLKQQIF--ADLEKYCPQHCILASNTSTIDLNK---IGERTKSQDRIVGAHFFS-P 453 (725)
T ss_dssp EEESSS-GGGTTCSEEEECCCSCHHHHHHHH--HHHHHHSCTTCEEEECCSSSCHHH---HTTTCSCTTTEEEEEECS-S
T ss_pred EEeCCH-HHHCCCCEEEEcCcCCHHHHHHHH--HHHHhhCCCCcEEEeCCCCCCHHH---HHHHhcCCCCEEEecCCC-C
Confidence 456777 688999999999999988766555 346666778888864 66777754 4433321 3566665 5
Q ss_pred CCCChHHhhcCceEEEecC---ChhHHHHHHHHHHHhcCCceecCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 025140 89 VSGSKKPAEDGQLIFLAAG---DKSLYNTVAPLLDIMGKSRFYLGD-VGNGAAMKLVVNMIMGSMMATFSEGLLHSEKVG 164 (257)
Q Consensus 89 V~g~~~~a~~g~l~i~~gg---~~~~~~~~~~ll~~~~~~~~~~G~-~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~G 164 (257)
+.. ..++.++.| ++++++++.++++.+++.++++|+ +|. ++|+++. ..++|++.++++ |
T Consensus 454 ~~~-------~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~d~~Gf-----i~Nril~----~~~~Ea~~l~~~-G 516 (725)
T 2wtb_A 454 AHI-------MPLLEIVRTNHTSAQVIVDLLDVGKKIKKTPVVVGNCTGF-----AVNRMFF----PYTQAAMFLVEC-G 516 (725)
T ss_dssp TTT-------CCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEEESSTTT-----THHHHHH----HHHHHHHHHHHT-T
T ss_pred ccc-------CceEEEEECCCCCHHHHHHHHHHHHHhCCEEEEECCCccH-----HHHHHHH----HHHHHHHHHHHC-C
Confidence 543 335555555 789999999999999999999987 553 4566554 468999999998 9
Q ss_pred CCHHHHHHHHhhc
Q 025140 165 LDPNVLVEVVSQG 177 (257)
Q Consensus 165 ld~~~~~~~l~~~ 177 (257)
+|++.+.+++ .+
T Consensus 517 ~~~e~id~~~-~~ 528 (725)
T 2wtb_A 517 ADPYLIDRAI-SK 528 (725)
T ss_dssp CCHHHHHHHH-HH
T ss_pred CCHHHHHHHH-HH
Confidence 9999999999 43
No 71
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=99.08 E-value=4.4e-10 Score=96.76 Aligned_cols=214 Identities=15% Similarity=0.120 Sum_probs=137.1
Q ss_pred hhhhhc-CccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCccccc-CCCCCEEEEcC-CCCHHHHHHHHHHHHHcCC
Q 025140 6 NAFYYS-RCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASG-MGPGKGYVDVS-TVDGDTSKLINGHIKATGA 82 (257)
Q Consensus 6 ~~~~~~-Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~-l~~g~~ivd~S-T~~p~~~~~la~~~~~~G~ 82 (257)
+.+.+. |.+.+.+..|+++++|+||+|+| ++.+++++ +.+.+. +.++++||..+ .++.+ .+.+++. .+.
T Consensus 43 ~~l~~~~gi~~~~~~~~~~~~aDvVilav~-p~~~~~vl---~~l~~~~l~~~~iiiS~~agi~~~---~l~~~l~-~~~ 114 (280)
T 3tri_A 43 DFFKEKCGVHTTQDNRQGALNADVVVLAVK-PHQIKMVC---EELKDILSETKILVISLAVGVTTP---LIEKWLG-KAS 114 (280)
T ss_dssp HHHHHTTCCEEESCHHHHHSSCSEEEECSC-GGGHHHHH---HHHHHHHHTTTCEEEECCTTCCHH---HHHHHHT-CCS
T ss_pred HHHHHHcCCEEeCChHHHHhcCCeEEEEeC-HHHHHHHH---HHHHhhccCCCeEEEEecCCCCHH---HHHHHcC-CCC
Confidence 345554 99999999999999999999997 57788888 566665 66777888654 45543 4555553 345
Q ss_pred cEEEecCCCChHHhhcCceEEEecC---ChhHHHHHHHHHHHhcCCceecCC---CchHHHHHHHHHHHHHHHHHHHHHH
Q 025140 83 SFLEAPVSGSKKPAEDGQLIFLAAG---DKSLYNTVAPLLDIMGKSRFYLGD---VGNGAAMKLVVNMIMGSMMATFSEG 156 (257)
Q Consensus 83 ~~vdapV~g~~~~a~~g~l~i~~gg---~~~~~~~~~~ll~~~~~~~~~~G~---~G~a~~~Kl~~n~~~~~~~~~~~Ea 156 (257)
+++-+ +...|.....|- +.++.| +++.++.++++|+.+|. ++++.+ ......+.-..+.+.+..+.++.|+
T Consensus 115 ~vvr~-mPn~p~~v~~g~-~~l~~~~~~~~~~~~~v~~l~~~iG~-~~~v~~E~~~d~~talsgsgpa~~~~~~eal~~a 191 (280)
T 3tri_A 115 RIVRA-MPNTPSSVRAGA-TGLFANETVDKDQKNLAESIMRAVGL-VIWVSSEDQIEKIAALSGSGPAYIFLIMEALQEA 191 (280)
T ss_dssp SEEEE-ECCGGGGGTCEE-EEEECCTTSCHHHHHHHHHHHGGGEE-EEECSSHHHHHHHHHHTTSHHHHHHHHHHHHHHH
T ss_pred eEEEE-ecCChHHhcCcc-EEEEeCCCCCHHHHHHHHHHHHHCCC-eEEECCHHHhhHHHHHhccHHHHHHHHHHHHHHH
Confidence 55543 223444444443 444443 57889999999999998 556643 2333333333344555566666665
Q ss_pred HHHHHHcCCCHHHHHHHHhhcCCCc-hhhhc--cccccc-cCCCCCCCchhhHHHHHHHHHHHHHhcCCCcHHHHHHHHH
Q 025140 157 LLHSEKVGLDPNVLVEVVSQGAISA-PMYSL--KGPSMI-ESLYPTAFPLKHQQKDLRLALGLAESVSQSTPIAAAANEL 232 (257)
Q Consensus 157 ~~la~~~Gld~~~~~~~l~~~~~~s-~~~~~--~~~~~~-~~~~~~~f~~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~ 232 (257)
+.+.|++.+..++++..+...+ .++.. .-|..+ +.-.+|+-+ ....++..++.|++..+.+++...
T Consensus 192 ---~v~~Gl~~~~a~~l~~~t~~G~a~~~~~~~~~p~~l~~~v~spgGt-------T~~~l~~le~~g~~~~~~~av~aa 261 (280)
T 3tri_A 192 ---AEQLGLTKETAELLTEQTVLGAARMALETEQSVVQLRQFVTSPGGT-------TEQAIKVLESGNLRELFIKALTAA 261 (280)
T ss_dssp ---HHHTTCCHHHHHHHHHHHHHHHHHHHHTCSSCHHHHHHHHCCTTSH-------HHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhccCCChH-------HHHHHHHHHHCChHHHHHHHHHHH
Confidence 6699999999999988754322 22211 112111 112234332 223566778899999999999999
Q ss_pred HHHHHHCC
Q 025140 233 YKVAKSHG 240 (257)
Q Consensus 233 ~~~a~~~g 240 (257)
++++.+.|
T Consensus 262 ~~r~~el~ 269 (280)
T 3tri_A 262 VNRAKELS 269 (280)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99987654
No 72
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.08 E-value=4.7e-10 Score=96.64 Aligned_cols=122 Identities=11% Similarity=0.082 Sum_probs=93.7
Q ss_pred hhhhhcCc--cccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCccccc-CCCCCEEEEcCCCCHHHHHHHHHHHHHcCC
Q 025140 6 NAFYYSRC--RYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASG-MGPGKGYVDVSTVDGDTSKLINGHIKATGA 82 (257)
Q Consensus 6 ~~~~~~Ga--~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~-l~~g~~ivd~ST~~p~~~~~la~~~~~~G~ 82 (257)
+.+.+.|. +.+.++.++++++|+||+|+|.+.. ++++ +.+.+. +.++++|+|++++.+...+.+.+.+.+++.
T Consensus 45 ~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~~~-~~v~---~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~ 120 (290)
T 3b1f_A 45 DIALERGIVDEATADFKVFAALADVIILAVPIKKT-IDFI---KILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPV 120 (290)
T ss_dssp HHHHHTTSCSEEESCTTTTGGGCSEEEECSCHHHH-HHHH---HHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSC
T ss_pred HHHHHcCCcccccCCHHHhhcCCCEEEEcCCHHHH-HHHH---HHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCC
Confidence 34555676 3667888999999999999997554 7787 556666 778999999999998888888887765588
Q ss_pred cEEE-ecCCC----ChHHhh----cCceEEEe---cCChhHHHHHHHHHHHhcCCceecCC
Q 025140 83 SFLE-APVSG----SKKPAE----DGQLIFLA---AGDKSLYNTVAPLLDIMGKSRFYLGD 131 (257)
Q Consensus 83 ~~vd-apV~g----~~~~a~----~g~l~i~~---gg~~~~~~~~~~ll~~~~~~~~~~G~ 131 (257)
+|++ .|++| +|..+. .|..+++. +++++.+++++++|+.+|.+++++++
T Consensus 121 ~~v~~~P~~g~~~~g~~~a~~~l~~g~~~~~~~~~~~~~~~~~~v~~l~~~~G~~~~~~~~ 181 (290)
T 3b1f_A 121 QFVGSHPMAGSHKSGAVAANVNLFENAYYIFSPSCLTKPNTIPALQDLLSGLHARYVEIDA 181 (290)
T ss_dssp EEEEEEEC-----CCTTSCCTTTTTTSEEEEEECTTCCTTHHHHHHHHTGGGCCEEEECCH
T ss_pred EEEEeCCcCCCCcchHHHhhHHHhCCCeEEEecCCCCCHHHHHHHHHHHHHcCCEEEEcCH
Confidence 8988 58876 555444 56655444 57888999999999999998878865
No 73
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.03 E-value=8.4e-10 Score=97.56 Aligned_cols=134 Identities=10% Similarity=0.115 Sum_probs=103.5
Q ss_pred hhhhhcCccccCCHHHHHhc----CCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcC
Q 025140 6 NAFYYSRCRYQPSPDEVAAS----CDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATG 81 (257)
Q Consensus 6 ~~~~~~Ga~~~~s~~ea~~~----advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G 81 (257)
+.+.+.|+..+.++.+++++ ||+||+|+| +..+.+++ +.+... .++.+|+|++++.+...+.+.+.+. +
T Consensus 45 ~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP-~~~~~~vl---~~l~~~-~~~~iv~Dv~Svk~~i~~~~~~~~~--~ 117 (341)
T 3ktd_A 45 KSAVDEGFDVSADLEATLQRAAAEDALIVLAVP-MTAIDSLL---DAVHTH-APNNGFTDVVSVKTAVYDAVKARNM--Q 117 (341)
T ss_dssp HHHHHTTCCEESCHHHHHHHHHHTTCEEEECSC-HHHHHHHH---HHHHHH-CTTCCEEECCSCSHHHHHHHHHTTC--G
T ss_pred HHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCC-HHHHHHHH---HHHHcc-CCCCEEEEcCCCChHHHHHHHHhCC--C
Confidence 44667898888999988764 799999999 46788888 455553 7899999999999988888776552 5
Q ss_pred CcEEE-ecCCCCh-HHhh-------cCceEEEecC---Chh--------HHHHHHHHHHHhcCCceecCCCchHHHHHHH
Q 025140 82 ASFLE-APVSGSK-KPAE-------DGQLIFLAAG---DKS--------LYNTVAPLLDIMGKSRFYLGDVGNGAAMKLV 141 (257)
Q Consensus 82 ~~~vd-apV~g~~-~~a~-------~g~l~i~~gg---~~~--------~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~ 141 (257)
.+|++ .|+.|+. .+.. .|..++++.+ +++ .+++++++|+.+|.+++++++..--..+.++
T Consensus 118 ~~~v~~HPmaG~e~sG~~aa~~~Lf~g~~~iltp~~~~~~e~~~~~~~~~~~~v~~l~~~~Ga~v~~~~~~~HD~~~A~v 197 (341)
T 3ktd_A 118 HRYVGSHPMAGTANSGWSASMDGLFKRAVWVVTFDQLFDGTDINSTWISIWKDVVQMALAVGAEVVPSRVGPHDAAAARV 197 (341)
T ss_dssp GGEECEEECCSCC-CCGGGCCSSTTTTCEEEECCGGGTSSCCCCHHHHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHH
T ss_pred CcEecCCccccccccchhhhhhHHhcCCeEEEEeCCCCChhhhccchHHHHHHHHHHHHHcCCEEEEeCHHHHHHHHHHH
Confidence 78998 7999874 2322 3456777765 456 8999999999999989999887667777777
Q ss_pred HHHHH
Q 025140 142 VNMIM 146 (257)
Q Consensus 142 ~n~~~ 146 (257)
..+-.
T Consensus 198 shlPh 202 (341)
T 3ktd_A 198 SHLTH 202 (341)
T ss_dssp THHHH
T ss_pred hHHHH
Confidence 66543
No 74
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.02 E-value=1.2e-10 Score=96.03 Aligned_cols=118 Identities=14% Similarity=0.113 Sum_probs=86.0
Q ss_pred HHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCH--H-------H----HHHHHHHHHHcCCcEEEe-
Q 025140 22 VAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDG--D-------T----SKLINGHIKATGASFLEA- 87 (257)
Q Consensus 22 a~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p--~-------~----~~~la~~~~~~G~~~vda- 87 (257)
+++++|+||+|+| +.++++++ +.+.+.+. ++++|++++.-+ + + .+.+++.+. +.+|+++
T Consensus 54 ~~~~aD~vi~av~-~~~~~~v~---~~l~~~~~-~~~vi~~~~g~~~~~~~~l~~~~~~~~~~~l~~~l~--~~~vv~~~ 126 (209)
T 2raf_A 54 ATTLGEIVIMAVP-YPALAALA---KQYATQLK-GKIVVDITNPLNFDTWDDLVVPADSSAAQELQQQLP--DSQVLKAF 126 (209)
T ss_dssp CSSCCSEEEECSC-HHHHHHHH---HHTHHHHT-TSEEEECCCCBCTTTSSSBSSCTTCCHHHHHHHHCT--TSEEEECS
T ss_pred HhccCCEEEEcCC-cHHHHHHH---HHHHHhcC-CCEEEEECCCCCccccccccCCCCCcHHHHHHHHCC--CCcEEEee
Confidence 6778999999999 77888888 45655565 899999988332 1 2 445554442 5788883
Q ss_pred cCCCChHHhh---c--CceEEEecCC-hhHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHHHH
Q 025140 88 PVSGSKKPAE---D--GQLIFLAAGD-KSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIM 146 (257)
Q Consensus 88 pV~g~~~~a~---~--g~l~i~~gg~-~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~~ 146 (257)
-...+|..+. . +...++++|+ ++.+++++++|+.++.+++++|+++.|..+|.++|++.
T Consensus 127 ~~~~~p~~~~~~~~g~~~~~~~~~g~~~~~~~~v~~ll~~~G~~~~~~~~i~~a~~~K~i~~l~~ 191 (209)
T 2raf_A 127 NTTFAATLQSGQVNGKEPTTVLVAGNDDSAKQRFTRALADSPLEVKDAGKLKRARELEAMGFMQM 191 (209)
T ss_dssp TTSCHHHHHHSEETTTEECEEEEEESCHHHHHHHHHHTTTSSCEEEEEESGGGHHHHHHHHHHHH
T ss_pred ecccHhhccccccCCCCCceeEEcCCCHHHHHHHHHHHHHcCCceEeCCCHhHHHHhcchHHHHH
Confidence 2222333322 1 3456667765 58899999999999988999999999999999998873
No 75
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.00 E-value=9.3e-10 Score=101.23 Aligned_cols=139 Identities=17% Similarity=0.239 Sum_probs=100.5
Q ss_pred cccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHH----cCCcEEEecC
Q 025140 14 RYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKA----TGASFLEAPV 89 (257)
Q Consensus 14 ~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~----~G~~~vdapV 89 (257)
+++.++ +++++||+||.|+|.+.+++..++ ..+.+.+.++++|++ ||.++... ++++.+.. .|.+|. +|+
T Consensus 104 ~i~~~~-~~~~~aDlVIeaVpe~~~~k~~v~--~~l~~~~~~~~ii~s-nTs~~~~~-~la~~~~~~~~~ig~hf~-~P~ 177 (463)
T 1zcj_A 104 RFSSST-KELSTVDLVVEAVFEDMNLKKKVF--AELSALCKPGAFLCT-NTSALNVD-DIASSTDRPQLVIGTHFF-SPA 177 (463)
T ss_dssp EEESCG-GGGTTCSEEEECCCSCHHHHHHHH--HHHHHHSCTTCEEEE-CCSSSCHH-HHHTTSSCGGGEEEEEEC-SST
T ss_pred hhcCCH-HHHCCCCEEEEcCCCCHHHHHHHH--HHHHhhCCCCeEEEe-CCCCcCHH-HHHHHhcCCcceEEeecC-CCc
Confidence 346677 678899999999999876655443 345566778888886 77776665 66665532 256665 565
Q ss_pred CCChHHhhcCceEEEec---CChhHHHHHHHHHHHhcCCceecCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 025140 90 SGSKKPAEDGQLIFLAA---GDKSLYNTVAPLLDIMGKSRFYLGD-VGNGAAMKLVVNMIMGSMMATFSEGLLHSEKVGL 165 (257)
Q Consensus 90 ~g~~~~a~~g~l~i~~g---g~~~~~~~~~~ll~~~~~~~~~~G~-~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gl 165 (257)
.. ..+..++. ++++++++++++++.+++.++++++ .|. ++|+++.. .++|++.+.++ |+
T Consensus 178 ~~-------~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~~~~gf-----i~Nrll~~----~~~ea~~l~~~-G~ 240 (463)
T 1zcj_A 178 HV-------MRLLEVIPSRYSSPTTIATVMSLSKKIGKIGVVVGNCYGF-----VGNRMLAP----YYNQGFFLLEE-GS 240 (463)
T ss_dssp TT-------CCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEBCCSTTT-----THHHHHHH----HHHHHHHHHHT-TC
T ss_pred cc-------ceeEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEECCCccH-----HHHHHHHH----HHHHHHHHHHc-CC
Confidence 43 33444443 5889999999999999999999987 553 45555433 35999999888 89
Q ss_pred CHHHHHHHHh
Q 025140 166 DPNVLVEVVS 175 (257)
Q Consensus 166 d~~~~~~~l~ 175 (257)
+++++.+++.
T Consensus 241 ~~~~id~~~~ 250 (463)
T 1zcj_A 241 KPEDVDGVLE 250 (463)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 9999999886
No 76
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.90 E-value=4.7e-11 Score=100.19 Aligned_cols=126 Identities=12% Similarity=0.060 Sum_probs=98.4
Q ss_pred ccCCHHHHH-hcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHH---HHHHHHHHHHcCCc-EEEecC
Q 025140 15 YQPSPDEVA-ASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDT---SKLINGHIKATGAS-FLEAPV 89 (257)
Q Consensus 15 ~~~s~~ea~-~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~---~~~la~~~~~~G~~-~vdapV 89 (257)
.++|+.|++ .++|+||+|+|++...+.+. ..+..|+.+|+.+|..++. .+++.+.++++|.. ++|+|+
T Consensus 39 ~~~~~~~l~~~~~DvVv~~~~~~~~~~~~~-------~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~~~i~~~~ 111 (236)
T 2dc1_A 39 MVRGIDEFLQREMDVAVEAASQQAVKDYAE-------KILKAGIDLIVLSTGAFADRDFLSRVREVCRKTGRRVYIASGA 111 (236)
T ss_dssp EESSHHHHTTSCCSEEEECSCHHHHHHHHH-------HHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHCCCEEECCTT
T ss_pred hcCCHHHHhcCCCCEEEECCCHHHHHHHHH-------HHHHCCCcEEEECcccCChHHHHHHHHHHHHhcCCeEEecCcc
Confidence 467899999 69999999999875554443 2356799999999987543 38999999999988 799999
Q ss_pred CCChHHhhcCceEEEecCChhHHHHHHHHHHHhcCCceecCCCch-HHHHHHHHHHHHHHHHH
Q 025140 90 SGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGN-GAAMKLVVNMIMGSMMA 151 (257)
Q Consensus 90 ~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~~G~~G~-a~~~Kl~~n~~~~~~~~ 151 (257)
+|+...+..+.+ +++...++..+|.++.++.+++|.|+.+. ++.+|..+|.+....++
T Consensus 112 ~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~n~~~~~~~a 170 (236)
T 2dc1_A 112 IGGLDAIFSASE----LIEEIVLTTRKNWRQFGRKGVIFEGSASEAAQKFPKNLNVAATLSIA 170 (236)
T ss_dssp CSCHHHHHHTGG----GEEEEEEEEEEEGGGTTSCEEEEEEEHHHHHHHSTTCCHHHHHHHHH
T ss_pred ccChHHHHHhhc----cccEEEEEEEcChHHcCcceEEEeccHHHHHHHCCchHHHHHHHHHh
Confidence 999998888885 77776667777778888888889998644 45788888887644443
No 77
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=98.88 E-value=2.2e-10 Score=94.77 Aligned_cols=132 Identities=15% Similarity=0.169 Sum_probs=88.9
Q ss_pred hhhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHH----HHHHHHHc--
Q 025140 7 AFYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKL----INGHIKAT-- 80 (257)
Q Consensus 7 ~~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~----la~~~~~~-- 80 (257)
.+.+.|.+.. +..++++++|+||+|+|. ..+++++ + +...+ ++++|||+++..+....+ ..+.+.+.
T Consensus 66 ~~~~~g~~~~-~~~~~~~~~DvVi~av~~-~~~~~v~---~-l~~~~-~~~~vv~~s~g~~~~~l~~~~~~~~~l~~~l~ 138 (215)
T 2vns_A 66 RLFPSAAQVT-FQEEAVSSPEVIFVAVFR-EHYSSLC---S-LSDQL-AGKILVDVSNPTEQEHLQHRESNAEYLASLFP 138 (215)
T ss_dssp HHSBTTSEEE-EHHHHTTSCSEEEECSCG-GGSGGGG---G-GHHHH-TTCEEEECCCCCHHHHHHCSSCHHHHHHHHCT
T ss_pred HHHHcCCcee-cHHHHHhCCCEEEECCCh-HHHHHHH---H-HHHhc-CCCEEEEeCCCcccccccccccHHHHHHHHCC
Confidence 4555577665 888999999999999995 4556665 2 43334 799999999988755321 12222221
Q ss_pred CCcEEEe--cCCCCh--HHhhcCc-eEEEecCChhHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHHH
Q 025140 81 GASFLEA--PVSGSK--KPAEDGQ-LIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMI 145 (257)
Q Consensus 81 G~~~vda--pV~g~~--~~a~~g~-l~i~~gg~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~ 145 (257)
+.+++-+ ++++.+ +....+. ..++.|++++.+++++++|+.+|.+++++|+.|+|+.++...+++
T Consensus 139 ~~~vv~~~n~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~~ll~~~G~~~~~~g~~~~~~~~e~~~~~~ 208 (215)
T 2vns_A 139 TCTVVKAFNVISAWTLQAGPRDGNRQVPICGDQPEAKRAVSEMALAMGFMPVDMGSLASAWEVEAMPLRL 208 (215)
T ss_dssp TSEEEEECTTBCHHHHHTCSCSSCCEEEEEESCHHHHHHHHHHHHHTTCEEEECCSGGGHHHHHHSCCBC
T ss_pred CCeEEeccccccHhHhcccccCCceeEEEecCCHHHHHHHHHHHHHcCCceEeecchhhhhHhhhhhhhh
Confidence 3344432 222111 1111233 367788899999999999999999999999999999998655443
No 78
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=98.77 E-value=5.5e-09 Score=86.61 Aligned_cols=121 Identities=17% Similarity=0.248 Sum_probs=85.5
Q ss_pred cCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCH------------HHHHHHHHHHH
Q 025140 11 SRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDG------------DTSKLINGHIK 78 (257)
Q Consensus 11 ~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p------------~~~~~la~~~~ 78 (257)
.|.....+..++++++|+||+|+| +..+++++ +.+.. + ++++||++++.-+ ...+.+++.+.
T Consensus 67 ~g~~~~~~~~~~~~~aDvVilavp-~~~~~~v~---~~l~~-~-~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~ 140 (220)
T 4huj_A 67 FGASVKAVELKDALQADVVILAVP-YDSIADIV---TQVSD-W-GGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVP 140 (220)
T ss_dssp HTTTEEECCHHHHTTSSEEEEESC-GGGHHHHH---TTCSC-C-TTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHST
T ss_pred hCCCcccChHHHHhcCCEEEEeCC-hHHHHHHH---HHhhc-c-CCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCC
Confidence 377666677788999999999999 56778888 45554 3 6899999997552 15566666663
Q ss_pred HcCCcEE------EecCCC-ChHHhhcCceEEEecCChhHHHHHHHHHHHhcCCceecCCCchHHHHH
Q 025140 79 ATGASFL------EAPVSG-SKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMK 139 (257)
Q Consensus 79 ~~G~~~v------dapV~g-~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~K 139 (257)
+.+++ .+++.. +|.....+...++.|.++++.++++++|+.+|.+++++|+++.|..+.
T Consensus 141 --~~~vv~~~~~~~~~v~~~g~~~~~~~~~v~~~g~~~~~~~~v~~l~~~~G~~~~~~G~l~~a~~~~ 206 (220)
T 4huj_A 141 --GAKVVKAFNTLPAAVLAADPDKGTGSRVLFLSGNHSDANRQVAELISSLGFAPVDLGTLAASGPIQ 206 (220)
T ss_dssp --TCEEEEESCSSCHHHHTSCSBCSSCEEEEEEEESCHHHHHHHHHHHHHTTCEEEECCSHHHHHHHH
T ss_pred --CCCEEECCCCCCHHHhhhCcccCCCCeeEEEeCCCHHHHHHHHHHHHHhCCCeEeeCChhhcchhh
Confidence 33443 344444 343222233345556678999999999999999999999988876543
No 79
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.69 E-value=2.8e-11 Score=105.86 Aligned_cols=112 Identities=17% Similarity=0.176 Sum_probs=85.2
Q ss_pred hhhhhc-C--ccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCC
Q 025140 6 NAFYYS-R--CRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGA 82 (257)
Q Consensus 6 ~~~~~~-G--a~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~ 82 (257)
+.|.+. | ++.++++.|+++++|+||+|+|.. +.++. + +.+.+|++|+++++..|+. +++.+.+.++|.
T Consensus 174 ~~l~~~~~~~~~~~~~~~e~v~~aDiVi~atp~~---~~v~~---~--~~l~~g~~vi~~g~~~p~~-~el~~~~~~~g~ 244 (312)
T 2i99_A 174 EKFADTVQGEVRVCSSVQEAVAGADVIITVTLAT---EPILF---G--EWVKPGAHINAVGASRPDW-RELDDELMKEAV 244 (312)
T ss_dssp HHHHHHSSSCCEECSSHHHHHTTCSEEEECCCCS---SCCBC---G--GGSCTTCEEEECCCCSTTC-CSBCHHHHHHSE
T ss_pred HHHHHHhhCCeEEeCCHHHHHhcCCEEEEEeCCC---CcccC---H--HHcCCCcEEEeCCCCCCCc-eeccHHHHhcCE
Confidence 345554 5 778899999999999999999963 33431 1 4577999999999999976 889989999999
Q ss_pred cEEE----ecC-CCCh---HHhhcCceEEEecCChhHHHHHHHHHHHhcCCc
Q 025140 83 SFLE----APV-SGSK---KPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSR 126 (257)
Q Consensus 83 ~~vd----apV-~g~~---~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~ 126 (257)
.|+| +|+ +|.. ..+..++|..|++|+.+.+++..++|+.+|..+
T Consensus 245 ~~vD~~~~a~~~~G~~~~~~~~~~g~L~~~v~G~~~~~~~~~~vf~~~G~~i 296 (312)
T 2i99_A 245 LYVDSQEAALKESGDVLLSGAEIFAELGEVIKGVKPAHCEKTTVFKSLGMAV 296 (312)
T ss_dssp EEESCHHHHHHHCHHHHTTTCCCCEEHHHHHHTSSCCCTTSCEEEECCCCHH
T ss_pred EEECCHHHHHhhcCCcccChhhccccHHHHhCCCCCCCCCCcEEEECCChHH
Confidence 9999 788 5554 445668899999998876666555555555443
No 80
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=98.54 E-value=4.9e-07 Score=75.38 Aligned_cols=109 Identities=12% Similarity=0.144 Sum_probs=81.1
Q ss_pred hhhhcCccc--cCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcE
Q 025140 7 AFYYSRCRY--QPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASF 84 (257)
Q Consensus 7 ~~~~~Ga~~--~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ 84 (257)
.|...|-++ .+.+.+ +++|| |+|+|++ ++.+++ +++.+.+.+|++|+|+|...+. ++.+.+..+|+.|
T Consensus 24 ~L~~~G~~V~~~~~~~~-~~~aD--ilavP~~-ai~~vl---~~l~~~l~~g~ivvd~sgs~~~---~vl~~~~~~g~~f 93 (232)
T 3dfu_A 24 KLDSVGHYVTVLHAPED-IRDFE--LVVIDAH-GVEGYV---EKLSAFARRGQMFLHTSLTHGI---TVMDPLETSGGIV 93 (232)
T ss_dssp HHHHTTCEEEECSSGGG-GGGCS--EEEECSS-CHHHHH---HHHHTTCCTTCEEEECCSSCCG---GGGHHHHHTTCEE
T ss_pred HHHHCCCEEEEecCHHH-hccCC--EEEEcHH-HHHHHH---HHHHHhcCCCCEEEEECCcCHH---HHHHHHHhCCCcE
Confidence 455556533 345544 78899 8999996 778888 5677778899999998765443 2333445779998
Q ss_pred E-EecCCCChHHhhcCceEEEecCChhHHHHHHHHHHHhcCCceecCCCc
Q 025140 85 L-EAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVG 133 (257)
Q Consensus 85 v-dapV~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~~G~~G 133 (257)
+ .-|+.+.+ .++.++++++++.++++++.+|.+++++++..
T Consensus 94 vg~HPm~g~~--------~~i~a~d~~a~~~l~~L~~~lG~~vv~~~~~~ 135 (232)
T 3dfu_A 94 MSAHPIGQDR--------WVASALDELGETIVGLLVGELGGSIVEIADDK 135 (232)
T ss_dssp EEEEEEETTE--------EEEEESSHHHHHHHHHHHHHTTCEECCCCGGG
T ss_pred EEeeeCCCCc--------eeeeCCCHHHHHHHHHHHHHhCCEEEEeCHHH
Confidence 8 47997653 55666788899999999999999999998743
No 81
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=98.51 E-value=3.3e-06 Score=73.62 Aligned_cols=203 Identities=10% Similarity=0.131 Sum_probs=125.4
Q ss_pred cCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCC-CCHHHHHHHHHHHH-Hc--CCcEEEecCCC
Q 025140 16 QPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVST-VDGDTSKLINGHIK-AT--GASFLEAPVSG 91 (257)
Q Consensus 16 ~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST-~~p~~~~~la~~~~-~~--G~~~vdapV~g 91 (257)
.+++.+ ++++|+||+|+|.. ++++++ +.+.+.+.++++||.++. +.+. ..+.+.+. +. |..+..+-. .
T Consensus 78 ~~~~~~-~~~~D~vilavk~~-~~~~~l---~~l~~~l~~~~~iv~~~nGi~~~--~~l~~~~~~~vl~g~~~~~a~~-~ 149 (318)
T 3hwr_A 78 SSDPSA-VQGADLVLFCVKST-DTQSAA---LAMKPALAKSALVLSLQNGVENA--DTLRSLLEQEVAAAVVYVATEM-A 149 (318)
T ss_dssp ESCGGG-GTTCSEEEECCCGG-GHHHHH---HHHTTTSCTTCEEEEECSSSSHH--HHHHHHCCSEEEEEEEEEEEEE-E
T ss_pred eCCHHH-cCCCCEEEEEcccc-cHHHHH---HHHHHhcCCCCEEEEeCCCCCcH--HHHHHHcCCcEEEEEEEEeEEE-c
Confidence 456644 68999999999986 778888 567777778888887765 4443 24555542 10 111222222 2
Q ss_pred ChHHhh-cCceEEEecCChhHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHHHHH---------------------HH
Q 025140 92 SKKPAE-DGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMG---------------------SM 149 (257)
Q Consensus 92 ~~~~a~-~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~~~---------------------~~ 149 (257)
+|..+. .+.-.+.+|. .+..+++..+|+.-+-++++..++-...-.|++.|.... ..
T Consensus 150 gP~~~~~~~~g~~~ig~-~~~~~~l~~~l~~~~~~~~~~~Di~~~~w~Kl~~N~~~n~l~al~~~~~g~l~~~~~~~~l~ 228 (318)
T 3hwr_A 150 GPGHVRHHGRGELVIEP-TSHGANLAAIFAAAGVPVETSDNVRGALWAKLILNCAYNALSAITQLPYGRLVRGEGVEAVM 228 (318)
T ss_dssp ETTEEEEEEEEEEEECC-CTTTHHHHHHHHHTTCCEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTSTTHHHHH
T ss_pred CCeEEEEcCCceEEEcC-CHHHHHHHHHHHhCCCCcEechHHHHHHHHHHHHHhhhhHHHHHHCCCHHHHhcChhHHHHH
Confidence 333332 1222344555 444578899998888777666668889999998886432 23
Q ss_pred HHHHHHHHHHHHHcCCCH-----HHHHHHHhhcC-CCchhhhccccccccCCCCCCCchhhHHHHHHHHHHHHHhcCCCc
Q 025140 150 MATFSEGLLHSEKVGLDP-----NVLVEVVSQGA-ISAPMYSLKGPSMIESLYPTAFPLKHQQKDLRLALGLAESVSQST 223 (257)
Q Consensus 150 ~~~~~Ea~~la~~~Gld~-----~~~~~~l~~~~-~~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~g~~~ 223 (257)
...+.|+..++++.|++. +.+++++.... ..|.+++. +..|.. .-++.. ...+++.++++|+++
T Consensus 229 ~~~~~E~~~va~a~G~~l~~~~~~~~~~~~~~~~~~~sSM~qD----~~~gr~---tEid~i---~G~vv~~a~~~gv~t 298 (318)
T 3hwr_A 229 RDVMEECFAVARAEGVKLPDDVALAIRRIAETMPRQSSSTAQD----LARGKR---SEIDHL---NGLIVRRGDALGIPV 298 (318)
T ss_dssp HHHHHHHHHHHHHTTCCCCTTHHHHHHHHHHHSTTCCCHHHHH----HHTTCC---CSGGGT---HHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHcCCCCChHHHHHHHHHHHhcCCCCcHHHHH----HHcCCh---hHHHHH---HHHHHHHHHHhCCCC
Confidence 467799999999999763 23444443322 22233222 112211 112222 345689999999999
Q ss_pred HHHHHHHHHHHHHH
Q 025140 224 PIAAAANELYKVAK 237 (257)
Q Consensus 224 p~~~~~~~~~~~a~ 237 (257)
|..+.+.++.+...
T Consensus 299 P~~~~l~~ll~~~e 312 (318)
T 3hwr_A 299 PANRVLHALVRLIE 312 (318)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHH
Confidence 99999888776543
No 82
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=98.50 E-value=2.1e-06 Score=75.35 Aligned_cols=207 Identities=18% Similarity=0.125 Sum_probs=125.7
Q ss_pred cCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCC---------H---------HHHHHHHHHH
Q 025140 16 QPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVD---------G---------DTSKLINGHI 77 (257)
Q Consensus 16 ~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~---------p---------~~~~~la~~~ 77 (257)
.+++.+ +..+|+||+|+|. .++++++ +.+.+.+.++++||.+.+.- | +....+.+.+
T Consensus 62 ~~~~~~-~~~~D~Vilavk~-~~~~~~~---~~l~~~l~~~~~iv~~~nGi~~~~~~~~g~~~~~~~~~~~~~~~l~~~~ 136 (335)
T 3ghy_A 62 THDAAA-LGEQDVVIVAVKA-PALESVA---AGIAPLIGPGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAI 136 (335)
T ss_dssp ESCHHH-HCCCSEEEECCCH-HHHHHHH---GGGSSSCCTTCEEEECCSSSCTTTTCSSSTTTTCCCTTTCTTSHHHHHS
T ss_pred ECCHHH-cCCCCEEEEeCCc-hhHHHHH---HHHHhhCCCCCEEEEECCCCccccccccccccccccccCCcHHHHHHhc
Confidence 467776 5899999999998 5788888 67777778899999887762 1 1222344444
Q ss_pred HHcCCcEEEecCC-----CChHHhh-cCceEEEec----CChhHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHH---
Q 025140 78 KATGASFLEAPVS-----GSKKPAE-DGQLIFLAA----GDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNM--- 144 (257)
Q Consensus 78 ~~~G~~~vdapV~-----g~~~~a~-~g~l~i~~g----g~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~--- 144 (257)
.. -+++.+-+. .+|..+. .+.-.+.+| .+.+..+++..+|+.-+-++++..++-...-.|++.|.
T Consensus 137 ~~--~~v~~gv~~~~a~~~~pg~v~~~~~g~~~iG~~~~~~~~~~~~l~~~l~~~g~~~~~~~di~~~~w~Kl~~na~~N 214 (335)
T 3ghy_A 137 PT--RHVLGCVVHLTCATVSPGHIRHGNGRRLILGEPAGGASPRLASIAALFGRAGLQAECSEAIQRDIWFKLWGNMTMN 214 (335)
T ss_dssp CG--GGEEEEEECCCEEESSTTEEEECSCCEEEEECTTCSCCHHHHHHHHHHHHTTCEEEECSCHHHHHHHHHHTTTTHH
T ss_pred Cc--ccEEEEEEEEEEEEcCCcEEEECCCCeEEEecCCCCcCHHHHHHHHHHHhCCCCcEeCchHHHHHHHHHHHHhhhh
Confidence 22 133333221 2232221 122234555 23466678888888877766655556666667766443
Q ss_pred ------------------HHHHHHHHHHHHHHHHHHcCCCH----HHHHHHHhhcCCCchhhhccccccccCCCCCCC-c
Q 025140 145 ------------------IMGSMMATFSEGLLHSEKVGLDP----NVLVEVVSQGAISAPMYSLKGPSMIESLYPTAF-P 201 (257)
Q Consensus 145 ------------------~~~~~~~~~~Ea~~la~~~Gld~----~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f-~ 201 (257)
....+..++.|+..++++.|+++ +.++++...... ..+.|+ .|+..+- .
T Consensus 215 ~l~al~~~~~g~~~~~~~~~~l~~~~~~E~~~va~a~G~~~~~~~~~~~~~~~~~~~-------~~sSM~-qD~~~gr~~ 286 (335)
T 3ghy_A 215 PVSVLTGATCDRILDDPLVSAFCLAVMAEAKAIGARIGCPIEQSGEARSAVTRQLGA-------FKTSML-QDAEAGRGP 286 (335)
T ss_dssp HHHHHHCCCHHHHHHSHHHHHHHHHHHHHHHHHHHTTTCCCCSCHHHHHHHHHTTCS-------CCCTTT-C-----CCC
T ss_pred HHHHHhCCChHHHhcChHHHHHHHHHHHHHHHHHHHcCCCCCccHHHHHHHHhccCC-------CCcHHH-HHHHcCCCC
Confidence 23455688999999999999764 334444433211 112333 2333332 2
Q ss_pred hhhHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Q 025140 202 LKHQQKDLRLALGLAESVSQSTPIAAAANELYKVAKS 238 (257)
Q Consensus 202 ~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~ 238 (257)
.+ .-.=...+++.++++|+++|..+.+.++.+...+
T Consensus 287 tE-id~i~G~vv~~a~~~gv~~P~~~~l~~li~~~e~ 322 (335)
T 3ghy_A 287 LE-IDALVASVREIGLHVGVPTPQIDTLLGLVRLHAQ 322 (335)
T ss_dssp CC-HHHHTHHHHHHHHHHTCCCHHHHHHHHHHHHHHH
T ss_pred ch-HHHHhhHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Confidence 22 1223456789999999999999999888876544
No 83
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=98.48 E-value=2.6e-06 Score=74.30 Aligned_cols=204 Identities=14% Similarity=0.051 Sum_probs=124.4
Q ss_pred ccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCC-CHHHHHHHHHHHHHcCCcEEEecCCCCh
Q 025140 15 YQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTV-DGDTSKLINGHIKATGASFLEAPVSGSK 93 (257)
Q Consensus 15 ~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~-~p~~~~~la~~~~~~G~~~vdapV~g~~ 93 (257)
...++.++.+.+|+||+|++... +++++ +.+.+.+.++++||.+... .+. ..+.+.+.. -+++.+|++-+.
T Consensus 61 ~~~~~~~~~~~~DlVilavK~~~-~~~~l---~~l~~~l~~~t~Iv~~~nGi~~~--~~l~~~~~~--~~vl~g~~~~~a 132 (320)
T 3i83_A 61 VVRSAAELETKPDCTLLCIKVVE-GADRV---GLLRDAVAPDTGIVLISNGIDIE--PEVAAAFPD--NEVISGLAFIGV 132 (320)
T ss_dssp EESCGGGCSSCCSEEEECCCCCT-TCCHH---HHHTTSCCTTCEEEEECSSSSCS--HHHHHHSTT--SCEEEEEEEEEE
T ss_pred eECCHHHcCCCCCEEEEecCCCC-hHHHH---HHHHhhcCCCCEEEEeCCCCChH--HHHHHHCCC--CcEEEEEEEece
Confidence 34677777778999999999854 34455 4455666778888877653 322 344444432 256777665422
Q ss_pred HHhh------cCceEEEec----CChhHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHHHH-----------------
Q 025140 94 KPAE------DGQLIFLAA----GDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIM----------------- 146 (257)
Q Consensus 94 ~~a~------~g~l~i~~g----g~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~~----------------- 146 (257)
.... .+.-.+.+| .+.+..+++..+|+.-+-++++..++-...--|++.|..+
T Consensus 133 ~~~~pg~v~~~~~~~~~ig~~~~~~~~~~~~l~~~l~~~~~~~~~~~di~~~~w~Kl~~N~~~N~ltal~~~~~g~~~~~ 212 (320)
T 3i83_A 133 TRTAPGEIWHQAYGRLMLGNYPGGVSERVKTLAAAFEEAGIDGIATENITTARWQKCVWNAAFNPLSVLSGGLDTLDILS 212 (320)
T ss_dssp EEEETTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHHHTTSCEEECSCHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHH
T ss_pred EEcCCCEEEECCCCEEEEecCCCCccHHHHHHHHHHHhCCCCceECHHHHHHHHHHHHHHHhhhHHHHHHCCCHHHHHhC
Confidence 2111 122244554 3456678889999888877777777888899998887521
Q ss_pred ---HHHHHHHHHHHHHHHHcCCCH-----HHHHHHHhhcC-CCchhhhccccccccCCCCCCCchhhHHHHHHHHHHHHH
Q 025140 147 ---GSMMATFSEGLLHSEKVGLDP-----NVLVEVVSQGA-ISAPMYSLKGPSMIESLYPTAFPLKHQQKDLRLALGLAE 217 (257)
Q Consensus 147 ---~~~~~~~~Ea~~la~~~Gld~-----~~~~~~l~~~~-~~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a~ 217 (257)
.....++.|+..++++.|++. +.++++....+ ..|.+++. +..+.. --++. =...+++.++
T Consensus 213 ~~~~l~~~~~~E~~~va~a~G~~l~~~~~~~~~~~~~~~~~~~sSM~qD----~~~gr~---tEid~---i~G~vv~~a~ 282 (320)
T 3i83_A 213 TQEGFVRAIMQEIRAVAAANGHPLPEDIVEKNVASTYKMPPYKTSMLVD----FEAGQP---METEV---ILGNAVRAGR 282 (320)
T ss_dssp HCHHHHHHHHHHHHHHHHHTTCCCCTTHHHHHHHHHHHSCCCCCHHHHH----HHHTCC---CCHHH---HTHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHhcCCCCCCcHHHH----HHhCCC---chHHH---HccHHHHHHH
Confidence 123467889999999999863 23333333221 12222211 111111 11222 1345689999
Q ss_pred hcCCCcHHHHHHHHHHHHH
Q 025140 218 SVSQSTPIAAAANELYKVA 236 (257)
Q Consensus 218 ~~g~~~p~~~~~~~~~~~a 236 (257)
++|+++|..+.+.++++..
T Consensus 283 ~~gv~~P~~~~l~~~l~~~ 301 (320)
T 3i83_A 283 RTRVAIPHLESVYALMKLL 301 (320)
T ss_dssp HTTCCCHHHHHHHHHHHHH
T ss_pred HhCCCCCHHHHHHHHHHHH
Confidence 9999999999988776544
No 84
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=98.45 E-value=6.9e-06 Score=71.31 Aligned_cols=209 Identities=14% Similarity=0.093 Sum_probs=122.5
Q ss_pred cCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCC-CHHHHHHHHHHHHHc----CCcEEEecCC
Q 025140 16 QPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTV-DGDTSKLINGHIKAT----GASFLEAPVS 90 (257)
Q Consensus 16 ~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~-~p~~~~~la~~~~~~----G~~~vdapV~ 90 (257)
.+++.+ +..+|+||+|++... +++++ +.+.+.+.++++||.+... .+. ..+.+.+... |..+..+-..
T Consensus 61 ~~~~~~-~~~~D~vilavk~~~-~~~~l---~~l~~~l~~~~~iv~l~nGi~~~--~~l~~~~~~~~v~~~~~~~~a~~~ 133 (312)
T 3hn2_A 61 YRAPEE-IGPMDLVLVGLKTFA-NSRYE---ELIRPLVEEGTQILTLQNGLGNE--EALATLFGAERIIGGVAFLCSNRG 133 (312)
T ss_dssp ESCHHH-HCCCSEEEECCCGGG-GGGHH---HHHGGGCCTTCEEEECCSSSSHH--HHHHHHTCGGGEEEEEEEEECCBC
T ss_pred ecCHHH-cCCCCEEEEecCCCC-cHHHH---HHHHhhcCCCCEEEEecCCCCcH--HHHHHHCCCCcEEEEEEEeeeEEc
Confidence 355644 678999999999754 45566 4566667788888887653 343 2445544322 1122222222
Q ss_pred CChHHhh-cCceEEEecC----ChhHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHHHH-------------------
Q 025140 91 GSKKPAE-DGQLIFLAAG----DKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIM------------------- 146 (257)
Q Consensus 91 g~~~~a~-~g~l~i~~gg----~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~~------------------- 146 (257)
+|..+. .+.-.+.+|. +.+..+++..+|+.-+-++++..++-...--|++.|...
T Consensus 134 -~p~~v~~~~~g~~~ig~~~~~~~~~~~~l~~~l~~~g~~~~~~~di~~~~w~Kl~~N~~~n~l~al~~~~~G~l~~~~~ 212 (312)
T 3hn2_A 134 -EPGEVHHLGAGRIILGEFLPRDTGRIEELAAMFRQAGVDCRTTDDLKRARWEKLVWNIPFNGLCALLQQPVNLILARDV 212 (312)
T ss_dssp -SSSEEEECEEEEEEEEESSCCCSHHHHHHHHHHHHTTCCEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTSHH
T ss_pred -CCcEEEECCCCeEEEecCCCCccHHHHHHHHHHHhCCCCcEEChHHHHHHHHHHHHHHhHHHHHHHHCCCHHHHHhChh
Confidence 233222 2222445542 346677888889888877666666777888888877642
Q ss_pred --HHHHHHHHHHHHHHHHcC--CCH-----HHHHHHHhhcC-CCchhhhccccccccCCCCCCCchhhHHHHHHHHHHHH
Q 025140 147 --GSMMATFSEGLLHSEKVG--LDP-----NVLVEVVSQGA-ISAPMYSLKGPSMIESLYPTAFPLKHQQKDLRLALGLA 216 (257)
Q Consensus 147 --~~~~~~~~Ea~~la~~~G--ld~-----~~~~~~l~~~~-~~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a 216 (257)
.....++.|+..++++.| ++. +.++++....+ ..|.+++. +..+.. --++. =...+++.+
T Consensus 213 ~~~l~~~~~~E~~~va~a~G~~~~~~~~~~~~~~~~~~~~~~~~sSM~qD----~~~gr~---tEid~---i~G~vv~~a 282 (312)
T 3hn2_A 213 SRKLVRGIMLEVIAGANAQGLATFIADGYVDDMLEFTDAMGEYKPSMEID----REEGRP---LEIAA---IFRTPLAYG 282 (312)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCSSCCCTTHHHHHHHHHTTSCSCCCHHHHH----HHTTCC---CCHHH---HTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCccCCCHHHHHHHHHHHhcCCCCCchHHHH----HHhCCC---ccHHH---HhhHHHHHH
Confidence 123456789999999999 542 22333332211 11222211 111111 11222 134678999
Q ss_pred HhcCCCcHHHHHHHHHHHHHHHCCCC
Q 025140 217 ESVSQSTPIAAAANELYKVAKSHGLS 242 (257)
Q Consensus 217 ~~~g~~~p~~~~~~~~~~~a~~~g~g 242 (257)
+++|+++|..+.+.++++.....|+-
T Consensus 283 ~~~gv~~P~~~~l~~ll~~~~~~~~~ 308 (312)
T 3hn2_A 283 AREGIAMPRVEMLATLLEQATGEGHH 308 (312)
T ss_dssp HHTTCCCHHHHHHHHHHHHHTTC---
T ss_pred HHhCCCCCHHHHHHHHHHHHHhcccc
Confidence 99999999999999999887777653
No 85
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=98.34 E-value=1.8e-06 Score=76.11 Aligned_cols=153 Identities=10% Similarity=0.047 Sum_probs=95.0
Q ss_pred hhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCC-cccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEE-
Q 025140 8 FYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKH-GAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL- 85 (257)
Q Consensus 8 ~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~-~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~v- 85 (257)
..+.|.+.. ++.|++++||+||+|+|+... .+++ + .+.+.+.++++|++++++.. .+.+.....+++++
T Consensus 56 a~~~G~~~~-~~~e~~~~aDvVilavp~~~~-~~v~---~~~i~~~l~~~~ivi~~~gv~~----~~~~~~~~~~~~vv~ 126 (338)
T 1np3_A 56 AEAHGLKVA-DVKTAVAAADVVMILTPDEFQ-GRLY---KEEIEPNLKKGATLAFAHGFSI----HYNQVVPRADLDVIM 126 (338)
T ss_dssp HHHTTCEEE-CHHHHHHTCSEEEECSCHHHH-HHHH---HHHTGGGCCTTCEEEESCCHHH----HTTSSCCCTTCEEEE
T ss_pred HHHCCCEEc-cHHHHHhcCCEEEEeCCcHHH-HHHH---HHHHHhhCCCCCEEEEcCCchh----HHHhhcCCCCcEEEe
Confidence 445687766 899999999999999997654 7777 4 66677888999999865432 12221113355565
Q ss_pred EecCCCChHH------hhcCceEEEe---cCChhHHHHHHHHHHHhcC-C--ceecCCCchHHHHHHHHH-HHHHHHHHH
Q 025140 86 EAPVSGSKKP------AEDGQLIFLA---AGDKSLYNTVAPLLDIMGK-S--RFYLGDVGNGAAMKLVVN-MIMGSMMAT 152 (257)
Q Consensus 86 dapV~g~~~~------a~~g~l~i~~---gg~~~~~~~~~~ll~~~~~-~--~~~~G~~G~a~~~Kl~~n-~~~~~~~~~ 152 (257)
..| +|.... ...|...+++ +.+.+.++.++.+++.+|. + ++.+.....-.......+ .+..+....
T Consensus 127 ~~P-~gp~~a~~~l~~~G~g~~~ii~~~~~~~~~a~~~~~~l~~~lG~~~agv~~~~~~~~~~~~~~~s~~~l~G~lp~~ 205 (338)
T 1np3_A 127 IAP-KAPGHTVRSEFVKGGGIPDLIAIYQDASGNAKNVALSYACGVGGGRTGIIETTFKDETETDLFGEQAVLCGGCVEL 205 (338)
T ss_dssp EEE-SSCSHHHHHHHHTTCCCCEEEEEEECSSSCHHHHHHHHHHHTTHHHHCEEECCHHHHHHHHHHHHHHTTTHHHHHH
T ss_pred ccC-CCCchhHHHHHhccCCCeEEEEecCCCCHHHHHHHHHHHHHcCCCccceEeechhcccchHHHHHHHHHhhhHHHH
Confidence 346 333221 1225544433 3467888999999999998 4 666543323334445444 333334444
Q ss_pred HHHHHHHHHHcCCCHHHH
Q 025140 153 FSEGLLHSEKVGLDPNVL 170 (257)
Q Consensus 153 ~~Ea~~la~~~Gld~~~~ 170 (257)
++.++....+.|++++..
T Consensus 206 ia~~~e~l~~~Gl~~~~a 223 (338)
T 1np3_A 206 VKAGFETLVEAGYAPEMA 223 (338)
T ss_dssp HHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHHcCCCHHHH
Confidence 555555556889988643
No 86
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=97.87 E-value=8.9e-06 Score=62.33 Aligned_cols=67 Identities=19% Similarity=0.244 Sum_probs=56.0
Q ss_pred cCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEE
Q 025140 11 SRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE 86 (257)
Q Consensus 11 ~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vd 86 (257)
.|.+..+|++|+.+..|++++|+| ++.+.+++ +++.+ ...+.+|++++|. .+++.+.++++|+++++
T Consensus 55 ~G~~~~~s~~el~~~vDlvii~vp-~~~v~~v~---~~~~~-~g~~~i~~~~~~~----~~~l~~~a~~~Gi~~ig 121 (138)
T 1y81_A 55 EGLKCYRSVRELPKDVDVIVFVVP-PKVGLQVA---KEAVE-AGFKKLWFQPGAE----SEEIRRFLEKAGVEYSF 121 (138)
T ss_dssp TTEECBSSGGGSCTTCCEEEECSC-HHHHHHHH---HHHHH-TTCCEEEECTTSC----CHHHHHHHHHHTCEEEC
T ss_pred CCeeecCCHHHhCCCCCEEEEEeC-HHHHHHHH---HHHHH-cCCCEEEEcCccH----HHHHHHHHHHCCCEEEc
Confidence 588899999999999999999999 58888888 44554 3456799999885 58888999999999997
No 87
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=97.85 E-value=9.4e-06 Score=69.93 Aligned_cols=80 Identities=11% Similarity=0.081 Sum_probs=68.4
Q ss_pred ccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEecCCCC
Q 025140 13 CRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGS 92 (257)
Q Consensus 13 a~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vdapV~g~ 92 (257)
....+++.|++++||+|++|+|..++++.++. ++.++.+++|.++||+|+..+-..+.+.+.+++.++......|+..
T Consensus 161 ~~~~~~l~ell~~aDiV~l~~P~t~~t~~li~--~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ga~lDV~~~ 238 (290)
T 3gvx_A 161 DVISESPADLFRQSDFVLIAIPLTDKTRGMVN--SRLLANARKNLTIVNVARADVVSKPDMIGFLKERSDVWYLSDVWWN 238 (290)
T ss_dssp SEECSSHHHHHHHCSEEEECCCCCTTTTTCBS--HHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTT
T ss_pred ccccCChHHHhhccCeEEEEeeccccchhhhh--HHHHhhhhcCceEEEeehhcccCCcchhhhhhhccceEEeeccccC
Confidence 45677999999999999999998887777663 3567789999999999999999999999999998888877778776
Q ss_pred hH
Q 025140 93 KK 94 (257)
Q Consensus 93 ~~ 94 (257)
.+
T Consensus 239 EP 240 (290)
T 3gvx_A 239 EP 240 (290)
T ss_dssp TT
T ss_pred Cc
Confidence 54
No 88
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=97.73 E-value=0.00024 Score=63.55 Aligned_cols=212 Identities=9% Similarity=-0.035 Sum_probs=119.6
Q ss_pred CccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCC-HHH--HHHHHHHHHHc-CCcEEEe
Q 025140 12 RCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVD-GDT--SKLINGHIKAT-GASFLEA 87 (257)
Q Consensus 12 Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~-p~~--~~~la~~~~~~-G~~~vda 87 (257)
..++..++.|+++++|+||+++|. +.+++++ +.+...+.++..+|.++-.- +++ .+-+.+.+.+. +.. .
T Consensus 104 ~i~~t~dl~~al~~ad~ii~avPs-~~~r~~l---~~l~~~~~~~~~iv~~~KGie~~~~~~~~~se~i~e~~~~~---~ 176 (391)
T 4fgw_A 104 NLVANPDLIDSVKDVDIIVFNIPH-QFLPRIC---SQLKGHVDSHVRAISCLKGFEVGAKGVQLLSSYITEELGIQ---C 176 (391)
T ss_dssp SEEEESCHHHHHTTCSEEEECSCG-GGHHHHH---HHHTTTSCTTCEEEECCCSCEEETTEEECHHHHHHHHHCCE---E
T ss_pred CcEEeCCHHHHHhcCCEEEEECCh-hhhHHHH---HHhccccCCCceeEEeccccccccccchhHHHHHHHHhCcc---c
Confidence 455678999999999999999996 7788888 56667778888898887431 111 12344444332 433 3
Q ss_pred cCCCChHHhh-----cCceEEEecCChh---------HHHHHHHHHHHhcCCceecCC-Cc--hHHH-------------
Q 025140 88 PVSGSKKPAE-----DGQLIFLAAGDKS---------LYNTVAPLLDIMGKSRFYLGD-VG--NGAA------------- 137 (257)
Q Consensus 88 pV~g~~~~a~-----~g~l~i~~gg~~~---------~~~~~~~ll~~~~~~~~~~G~-~G--~a~~------------- 137 (257)
.|..||..|. ..+.+++.+-+.+ ..+.++.+|..=.-+++.--+ +| -|-+
T Consensus 177 ~vLsGPs~A~EVa~~~pta~~iA~~~~~~~~~~~~~~~a~~~~~lf~~~~frvy~s~DviGvElgGAlKNViAIAaGi~d 256 (391)
T 4fgw_A 177 GALSGANIATEVAQEHWSETTVAYHIPKDFRGEGKDVDHKVLKALFHRPYFHVSVIEDVAGISICGALKNVVALGCGFVE 256 (391)
T ss_dssp EEEECSCCHHHHHTTCCEEEEEECCCCTTCCCSSSSCCHHHHHHHHCBTTEEEEEESCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeccCCchHHHhhcCCCceEEEEecChhhhhhhhHHHHHHHHHHHhCCCCEEEEEeCCccceehHHHHHHHHHHHHHHHh
Confidence 4556666553 2333444433222 123344444321111221122 22 3333
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHc---CCCHHHH------HHHHhhcCC-CchhhhccccccccCCCC---------
Q 025140 138 -MKLVVNMIMGSMMATFSEGLLHSEKV---GLDPNVL------VEVVSQGAI-SAPMYSLKGPSMIESLYP--------- 197 (257)
Q Consensus 138 -~Kl~~n~~~~~~~~~~~Ea~~la~~~---Gld~~~~------~~~l~~~~~-~s~~~~~~~~~~~~~~~~--------- 197 (257)
+++-.|.-.+.+.-+++|+..|+... |-++..+ -|++-+... .++.+. ..+..+...
T Consensus 257 Glg~G~NakAALitrGl~Em~rlg~al~~~g~~~tt~~glaGlGDLi~Tc~sSRNr~~G---~~lg~~G~~~~~~~~~~~ 333 (391)
T 4fgw_A 257 GLGWGNNASAAIQRVGLGEIIRFGQMFFPESREETYYQESAGVADLITTCAGGRNVKVA---RLMATSGKDAWECEKELL 333 (391)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHSTTTHHHHHHHHHSSHHHHHH---HHHHHTCCCHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHHHHHhcccCCceeecCCCcccceeEEecCCccHHHH---HHHHhcCCCHHHHHHHHh
Confidence 34556888888888999999999998 5444433 233333211 111111 111111110
Q ss_pred CCCchhhHHHHHHHHHHHHHhcCC--CcHHHHHHHHHHH
Q 025140 198 TAFPLKHQQKDLRLALGLAESVSQ--STPIAAAANELYK 234 (257)
Q Consensus 198 ~~f~~~~~~KD~~~~~~~a~~~g~--~~p~~~~~~~~~~ 234 (257)
.+. +-...+-.+.+.+.+++.|+ ++|+++++++++.
T Consensus 334 ~g~-v~EGv~ta~~v~~l~~~~~v~~emPI~~~vy~IL~ 371 (391)
T 4fgw_A 334 NGQ-SAQGLITCKEVHEWLETCGSVEDFPLFEAVYQIVY 371 (391)
T ss_dssp TTC-CCTHHHHHHHHHHHHHHHTCSTTCHHHHHHHHHHH
T ss_pred CCC-EEehHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHh
Confidence 011 11234456677888999999 8999999988865
No 89
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=97.73 E-value=0.0011 Score=59.37 Aligned_cols=217 Identities=9% Similarity=0.025 Sum_probs=111.3
Q ss_pred ccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEc-CCCCHHHHHHHHHHHHHcC--CcEEE---ec
Q 025140 15 YQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDV-STVDGDTSKLINGHIKATG--ASFLE---AP 88 (257)
Q Consensus 15 ~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~-ST~~p~~~~~la~~~~~~G--~~~vd---ap 88 (257)
...++.++++++|+||+|||... .++++ +.+.+.+.++++||.. ++...+. ...+.+.+.+ ..++. .|
T Consensus 72 ~~~~~~~a~~~aD~Vilav~~~~-~~~v~---~~l~~~l~~~~ivv~~~~~~G~~~--~~~~~l~~~~~~~v~~~~~~~~ 145 (404)
T 3c7a_A 72 ITKDPEIAISGADVVILTVPAFA-HEGYF---QAMAPYVQDSALIVGLPSQAGFEF--QCRDILGDKAAAVSMMSFETLP 145 (404)
T ss_dssp EESCHHHHHTTCSEEEECSCGGG-HHHHH---HHHTTTCCTTCEEEETTCCTTHHH--HHHHHHGGGGGTSEEEEESSCS
T ss_pred EeCCHHHHhCCCCEEEEeCchHH-HHHHH---HHHHhhCCCCcEEEEcCCCccHHH--HHHHHHHhcCCCeEEEEecCch
Confidence 56789999999999999999865 56777 5666777788888885 3444222 1223333321 11333 12
Q ss_pred CCC---ChHHh----hcCceEEEec---CChhHHHHHHHHHHHhcC-C-ceecCCC-c-------hHHHHH---------
Q 025140 89 VSG---SKKPA----EDGQLIFLAA---GDKSLYNTVAPLLDIMGK-S-RFYLGDV-G-------NGAAMK--------- 139 (257)
Q Consensus 89 V~g---~~~~a----~~g~l~i~~g---g~~~~~~~~~~ll~~~~~-~-~~~~G~~-G-------~a~~~K--------- 139 (257)
... +|..+ ..+. .+.+| ++.+..+++..+|+.++. . +.+...+ + ..+.+=
T Consensus 146 ~~~~~~gpg~~v~~~~~~~-~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~di~~~~l~~N~~~~~~~~l~~~~~~~ 224 (404)
T 3c7a_A 146 WACRIKEFGRKVEVLGTKS-VLAASLIKGTAKTVDPLSTLQMLHGAEPVFRLAKHFLEMLIMSYSFVHPAILFGRWGSWD 224 (404)
T ss_dssp EEEEEEETTTEEEEEEECS-EEEEEEECCSSCCSCHHHHHHHHHCSSSEEEECSCHHHHHHTTCTTHHHHHHHHHHTTCC
T ss_pred HhhcccCCCcEEEEEEECc-eEEEEEccCCcchHHHHHHHHHHhCCCCceeEcCCEeeeeecCCceeccHHHHHHHHhhh
Confidence 111 12211 1111 12222 111333456677766664 2 3222211 1 111110
Q ss_pred ---------HHH---HHHHHHHHHHHHHHHHHHHHc-----CCCHH---HHHHHHhhcCC-----Cch---hhhcc----
Q 025140 140 ---------LVV---NMIMGSMMATFSEGLLHSEKV-----GLDPN---VLVEVVSQGAI-----SAP---MYSLK---- 187 (257)
Q Consensus 140 ---------l~~---n~~~~~~~~~~~Ea~~la~~~-----Gld~~---~~~~~l~~~~~-----~s~---~~~~~---- 187 (257)
+.. +.....+.....|...++++. |+++. .+.+.+....+ .+. +++..
T Consensus 225 g~~~~~~~~~~~~~~~~~~~l~~~~~~E~~~va~a~~~~~~G~~~~~~~~~~d~~~~~~~~~~~~~~s~~~~~~~~~~~~ 304 (404)
T 3c7a_A 225 GKPVPEAPLFYQGIDQATADMLTACSNECKDVANAIMAACPGNDLSDVKDIYQWYLEYYHEDIQDDHDLYHAITTNKSYK 304 (404)
T ss_dssp SCCBSSCCBSGGGCCHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCTTCCCHHHHHHHHSTTTBSCCSSHHHHHHTBGGGT
T ss_pred cCCCCCCCccccCCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCHHHHHHHhCCCccCChhhHHHHHHhhhhhc
Confidence 111 133455667889999999999 99862 23344432211 111 11110
Q ss_pred ---cccc--cc----CCCCCCCchhhHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHC
Q 025140 188 ---GPSM--IE----SLYPTAFPLKHQQKDLRLALGLAESVSQSTPIAAAANELYKVAKSH 239 (257)
Q Consensus 188 ---~~~~--~~----~~~~~~f~~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~ 239 (257)
.| | .. .++..++...-..--+..+.+.++++|+++|+.+.+.+++......
T Consensus 305 d~~~P-~~~te~~~~~d~~~r~~~Edv~~~~~~v~~la~~~gV~tP~~~~l~~l~~~~~~~ 364 (404)
T 3c7a_A 305 GLVHP-VKAVDGGVAPDFGNRYLTEDIPMGMIVFKGVAIAAGVAIPSNDKLIMWAQEKIGK 364 (404)
T ss_dssp TCBCC-EEEETTEEEECCCSSTTTTTTTTTHHHHHHHHHHHTCCCHHHHHHHHHHHHHHTC
T ss_pred cCCCC-CCCcCCCccCCccccccccccccchHHHHHHHHHhCCCCchHHHHHHHHHHHhCc
Confidence 01 0 00 0111111111011123467899999999999999999998877554
No 90
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=97.67 E-value=0.00037 Score=64.37 Aligned_cols=104 Identities=14% Similarity=0.187 Sum_probs=81.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHhhcC-CCchhhhccccccccC-CC-----CCC
Q 025140 133 GNGAAMKLVVNMIMGSMMATFSEGLLHSEK------VGLDPNVLVEVVSQGA-ISAPMYSLKGPSMIES-LY-----PTA 199 (257)
Q Consensus 133 G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~------~Gld~~~~~~~l~~~~-~~s~~~~~~~~~~~~~-~~-----~~~ 199 (257)
+.++.+|++.|.+.++++.+.+|.+.+.++ .++|...+.++.+.+. ..|++++...+.+.+. +. +|.
T Consensus 322 ~~~~~~~~v~~al~~~~i~syaqGf~ll~~as~~~~w~l~~~~ia~iwr~GciIrs~~l~~i~~a~~~~~~l~~l~~~~~ 401 (497)
T 2p4q_A 322 DREQFVDDLEQALYASKIISYAQGFMLIREAAATYGWKLNNPAIALMWRGGCIIRSVFLGQITKAYREEPDLENLLFNKF 401 (497)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHSSSTTCBHHHHHHHHHHHHCTTCSCGGGSHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhcCCchHHHHHHHHHHHHhcCCChhhhhcCHH
Confidence 479999999999999999999999999888 7899999999999876 6889888654433221 11 111
Q ss_pred Cc--hhhHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Q 025140 200 FP--LKHQQKDLRLALGLAESVSQSTPIAAAANELYKVA 236 (257)
Q Consensus 200 f~--~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~~a 236 (257)
|. +.......+.++..+.+.|+|+|.+..++..|+.-
T Consensus 402 f~~~~~~~~~~~r~~v~~a~~~gvp~P~~s~aL~~~~~~ 440 (497)
T 2p4q_A 402 FADAVTKAQSGWRKSIALATTYGIPTPAFSTALSFYDGY 440 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc
Confidence 21 22223458889999999999999999999977754
No 91
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=97.64 E-value=0.00029 Score=64.79 Aligned_cols=112 Identities=15% Similarity=0.191 Sum_probs=85.9
Q ss_pred eecCCC-----chHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHhhcC-CCchhhhccccccccC
Q 025140 127 FYLGDV-----GNGAAMKLVVNMIMGSMMATFSEGLLHSEK------VGLDPNVLVEVVSQGA-ISAPMYSLKGPSMIES 194 (257)
Q Consensus 127 ~~~G~~-----G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~------~Gld~~~~~~~l~~~~-~~s~~~~~~~~~~~~~ 194 (257)
.+.|+. +.++.+|++.|.+.++++.+.+|.+.+.++ .++|...+.++.+.+. ..|++++...+.+.+.
T Consensus 314 ~~~g~~~~~~~~~~~~~~~v~~al~~~~~~syaqGf~ll~~as~~~~w~l~~~~ia~iwr~GciIrs~~l~~i~~a~~~~ 393 (480)
T 2zyd_A 314 VLSGPQAQPAGDKAEFIEKVRRALYLGKIVSYAQGFSQLRAASEEYNWDLNYGEIAKIFRAGCIIRAQFLQKITDACAEN 393 (480)
T ss_dssp TCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHTSSSSTTCBTHHHHHHHHHHHC
T ss_pred ccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhcCcchHHHHHHHHHHHHhcC
Confidence 355664 889999999999999999999999999888 7899999999998876 6888888654433221
Q ss_pred -CC-----CCCCc--hhhHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Q 025140 195 -LY-----PTAFP--LKHQQKDLRLALGLAESVSQSTPIAAAANELYKVAKS 238 (257)
Q Consensus 195 -~~-----~~~f~--~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~ 238 (257)
+. +|.|. +.......+.++..+.+.|+|+|.+..++..|+.-..
T Consensus 394 ~~l~~l~~~~~f~~~~~~~~~~~r~~v~~a~~~gvp~p~~s~al~~~~~~~~ 445 (480)
T 2zyd_A 394 PQIANLLLAPYFKQIADDYQQALRDVVAYAVQNGIPVPTFSAAVAYYDSYRA 445 (480)
T ss_dssp TTCSCGGGSHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTC
T ss_pred CChHhhhcCHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccc
Confidence 11 11122 2222345888999999999999999999998876543
No 92
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=97.62 E-value=0.00038 Score=63.94 Aligned_cols=111 Identities=15% Similarity=0.197 Sum_probs=85.0
Q ss_pred eecCCC-----chHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHhhcC-CCchhhhccccccccC
Q 025140 127 FYLGDV-----GNGAAMKLVVNMIMGSMMATFSEGLLHSEK------VGLDPNVLVEVVSQGA-ISAPMYSLKGPSMIES 194 (257)
Q Consensus 127 ~~~G~~-----G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~------~Gld~~~~~~~l~~~~-~~s~~~~~~~~~~~~~ 194 (257)
.+.|+. +.++.+|++.|.+.++++.+.+|.+.+.++ .++|...+.++.+.+. ..|++++...+.+.+.
T Consensus 306 ~~~g~~~~~~~~~~~~~~~v~~al~~~~~~~yaqGf~ll~~a~~~~~~~l~~~~ia~~wr~Gciirs~~l~~i~~a~~~~ 385 (474)
T 2iz1_A 306 VLSGPALDFSGDKKEVIEKIRKALYFSKIMSYAQGFAQLRKASEEFDWDLPYGTIAQIWRAGCIIRAEFLQNITDAFDKD 385 (474)
T ss_dssp HCCCCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHTSSSCTTCBTTHHHHHHHHHHC
T ss_pred ccCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhccchHHHHHHHHHHHHHhcC
Confidence 345664 889999999999999999999999999888 7899999999998876 5888887654433221
Q ss_pred -CC-----CCCCc--hhhHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Q 025140 195 -LY-----PTAFP--LKHQQKDLRLALGLAESVSQSTPIAAAANELYKVAK 237 (257)
Q Consensus 195 -~~-----~~~f~--~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~~a~ 237 (257)
+. +|.|. +.......+.++..+.+.|+|+|.+..++..|+.-.
T Consensus 386 ~~l~~l~~~~~~~~~~~~~~~~~r~~v~~a~~~~~p~p~~s~al~~~~~~~ 436 (474)
T 2iz1_A 386 SELENLLLDDYFVDITKRYQEAVRDVVSLAVQAGTPIPTFTSAISYYDSYR 436 (474)
T ss_dssp TTCCCGGGSHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHT
T ss_pred CChhhhhcCHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcc
Confidence 11 11122 222335588899999999999999999999777543
No 93
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=97.59 E-value=3.2e-05 Score=67.66 Aligned_cols=78 Identities=12% Similarity=0.090 Sum_probs=63.4
Q ss_pred cccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEecCCCCh
Q 025140 14 RYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSK 93 (257)
Q Consensus 14 ~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vdapV~g~~ 93 (257)
....++.|++++||+|++++|...+.+.++. .+.++.+++|.++||+|+..+-..+.+.+.+++..+...--.|+...
T Consensus 183 ~~~~~l~ell~~aDvV~l~lPlt~~T~~li~--~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~E 260 (324)
T 3hg7_A 183 YQLPALNKMLAQADVIVSVLPATRETHHLFT--ASRFEHCKPGAILFNVGRGNAINEGDLLTALRTGKLGMAVLDVFEQE 260 (324)
T ss_dssp ECGGGHHHHHHTCSEEEECCCCCSSSTTSBC--TTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTSSSEEEESCCSSS
T ss_pred cccCCHHHHHhhCCEEEEeCCCCHHHHHHhH--HHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcCCceEEEeccCCCC
Confidence 3467899999999999999998888777763 35677899999999999999999999999998877654444455443
No 94
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=97.58 E-value=1.8e-05 Score=61.11 Aligned_cols=66 Identities=15% Similarity=0.178 Sum_probs=54.3
Q ss_pred cCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEE
Q 025140 11 SRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 11 ~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~v 85 (257)
.|.+...|++|+....|++++|+|+ +.+.+++ +++.+ ...+.+|++++|. .+++.+.++++|++|+
T Consensus 56 ~G~~~~~sl~el~~~~Dlvii~vp~-~~v~~v~---~~~~~-~g~~~i~i~~~~~----~~~l~~~a~~~Gi~~i 121 (145)
T 2duw_A 56 LGQQGYATLADVPEKVDMVDVFRNS-EAAWGVA---QEAIA-IGAKTLWLQLGVI----NEQAAVLAREAGLSVV 121 (145)
T ss_dssp TTEECCSSTTTCSSCCSEEECCSCS-THHHHHH---HHHHH-HTCCEEECCTTCC----CHHHHHHHHTTTCEEE
T ss_pred CCeeccCCHHHcCCCCCEEEEEeCH-HHHHHHH---HHHHH-cCCCEEEEcCChH----HHHHHHHHHHcCCEEE
Confidence 5888899999999999999999995 7778887 44554 3456789998877 6788899999999998
No 95
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=97.55 E-value=3.2e-05 Score=68.42 Aligned_cols=83 Identities=12% Similarity=0.038 Sum_probs=68.5
Q ss_pred hhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEe
Q 025140 8 FYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEA 87 (257)
Q Consensus 8 ~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vda 87 (257)
..+.|++.++++.|++++||+|++++|...+.+.++. .+.++.+++|.++||+|+..+-....+.+.+++.++...--
T Consensus 198 ~~~~g~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~--~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~l 275 (352)
T 3gg9_A 198 ARADGFAVAESKDALFEQSDVLSVHLRLNDETRSIIT--VADLTRMKPTALFVNTSRAELVEENGMVTALNRGRPGMAAI 275 (352)
T ss_dssp HHHTTCEECSSHHHHHHHCSEEEECCCCSTTTTTCBC--HHHHTTSCTTCEEEECSCGGGBCTTHHHHHHHHTSSSEEEE
T ss_pred HHhcCceEeCCHHHHHhhCCEEEEeccCcHHHHHhhC--HHHHhhCCCCcEEEECCCchhhcHHHHHHHHHhCCccEEEe
Confidence 4567888889999999999999999998887776663 35667889999999999999999999999999887765444
Q ss_pred cCCCC
Q 025140 88 PVSGS 92 (257)
Q Consensus 88 pV~g~ 92 (257)
.|+..
T Consensus 276 DV~~~ 280 (352)
T 3gg9_A 276 DVFET 280 (352)
T ss_dssp CCCSS
T ss_pred cccCC
Confidence 45543
No 96
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=97.53 E-value=0.004 Score=52.81 Aligned_cols=154 Identities=11% Similarity=0.083 Sum_probs=103.0
Q ss_pred hhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEec
Q 025140 9 YYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAP 88 (257)
Q Consensus 9 ~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vdap 88 (257)
-+.|.++.++-.||++++|++|+-+|-....-++. +.++.+++.|.+|-+..|++|-.--.+-+.+.++.+..-..=
T Consensus 125 EdaGVkVtsDD~EAvk~AEi~IlftPfG~~t~~Ia---kkii~~lpEgAII~nTCTipp~~ly~~le~l~R~DvgIsS~H 201 (358)
T 2b0j_A 125 EDVGLKVTSDDREAVEGADIVITWLPKGNKQPDII---KKFADAIPEGAIVTHACTIPTTKFAKIFKDLGREDLNITSYH 201 (358)
T ss_dssp GGGTCEEESCHHHHHTTCSEEEECCTTCTTHHHHH---HHHGGGSCTTCEEEECSSSCHHHHHHHHHHTTCTTSEEEECB
T ss_pred HHcCcEeecchHHHhcCCCEEEEecCCCCCcHHHH---HHHHhhCcCCCEEecccCCCHHHHHHHHHHhCcccCCeeccC
Confidence 35799999999999999999999999877555566 678889999999999999999877776666554433322111
Q ss_pred CCCChHHhhcCceEEEec-CChhHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCC
Q 025140 89 VSGSKKPAEDGQLIFLAA-GDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSMMATFSEGLLHS-EKVGLD 166 (257)
Q Consensus 89 V~g~~~~a~~g~l~i~~g-g~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la-~~~Gld 166 (257)
-++.++. .|+..+=-+ .+++..+++.++-+..++..|.+-.-=.+....|.. .+.+..++++.+-.... +-.|.+
T Consensus 202 -PaaVPgt-~Gq~~~g~~yAtEEqIeklveLaksa~k~ay~vPAdl~SpV~DMgs-~vTAv~~AGiL~Y~~~vtkIlgAP 278 (358)
T 2b0j_A 202 -PGCVPEM-KGQVYIAEGYASEEAVNKLYEIGKIARGKAFKMPANLIGPVCDMCS-AVTATVYAGLLAYRDAVTKILGAP 278 (358)
T ss_dssp -CSSCTTT-CCCEEEEESSSCHHHHHHHHHHHHHHHSCEEEEEHHHHHHHHSTTH-HHHHHHHHHHHHHHHHHHTTSCCC
T ss_pred -CCCCCCC-CCccccccccCCHHHHHHHHHHHHHhCCCeEecchhhccchhhhHH-HHHHHHHHHHHHHHHHHHHHhcCc
Confidence 1111222 566444444 578888999999999999876663212233333332 44566666666666444 345555
Q ss_pred HH
Q 025140 167 PN 168 (257)
Q Consensus 167 ~~ 168 (257)
.+
T Consensus 279 ~~ 280 (358)
T 2b0j_A 279 AD 280 (358)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 97
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=97.53 E-value=9e-05 Score=65.18 Aligned_cols=80 Identities=15% Similarity=0.090 Sum_probs=43.7
Q ss_pred cCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEecCC
Q 025140 11 SRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVS 90 (257)
Q Consensus 11 ~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vdapV~ 90 (257)
.+.....|+.|++++||+|++++|...+++.++. ++.++.+++|.++||+++..+-....+.+.+++..+...--.|+
T Consensus 208 ~~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~--~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDVf 285 (340)
T 4dgs_A 208 VDWIAHQSPVDLARDSDVLAVCVAASAATQNIVD--ASLLQALGPEGIVVNVARGNVVDEDALIEALKSGTIAGAGLDVF 285 (340)
T ss_dssp SCCEECSSHHHHHHTCSEEEECC----------C--HHHHHHTTTTCEEEECSCC--------------CCSSEEEESCC
T ss_pred cCceecCCHHHHHhcCCEEEEeCCCCHHHHHHhh--HHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCceEEEeCCc
Confidence 4566678999999999999999998888888773 35667789999999999999999999999998776654333444
Q ss_pred CC
Q 025140 91 GS 92 (257)
Q Consensus 91 g~ 92 (257)
..
T Consensus 286 ~~ 287 (340)
T 4dgs_A 286 VN 287 (340)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 98
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=97.53 E-value=4.7e-05 Score=67.13 Aligned_cols=81 Identities=10% Similarity=0.071 Sum_probs=65.1
Q ss_pred cCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEecCC
Q 025140 11 SRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVS 90 (257)
Q Consensus 11 ~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vdapV~ 90 (257)
.|++.++++.|++++||+|++++|..++.+.++. .+.++.+++|.++||+|...+-....+.+.+++..+...--.|+
T Consensus 213 ~g~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~--~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~LDVf 290 (345)
T 4g2n_A 213 EGAIYHDTLDSLLGASDIFLIAAPGRPELKGFLD--HDRIAKIPEGAVVINISRGDLINDDALIEALRSKHLFAAGLDVF 290 (345)
T ss_dssp TTCEECSSHHHHHHTCSEEEECSCCCGGGTTCBC--HHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCC
T ss_pred cCCeEeCCHHHHHhhCCEEEEecCCCHHHHHHhC--HHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCceEEEecCC
Confidence 3888889999999999999999998887776662 34667789999999999999999999999998765543333455
Q ss_pred CCh
Q 025140 91 GSK 93 (257)
Q Consensus 91 g~~ 93 (257)
...
T Consensus 291 ~~E 293 (345)
T 4g2n_A 291 ANE 293 (345)
T ss_dssp TTT
T ss_pred CCC
Confidence 443
No 99
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=97.52 E-value=3.5e-05 Score=68.07 Aligned_cols=81 Identities=11% Similarity=-0.057 Sum_probs=65.6
Q ss_pred hcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEecC
Q 025140 10 YSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPV 89 (257)
Q Consensus 10 ~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vdapV 89 (257)
+.|++.+.++.|++++||+|++++|..++.+.++. ++.++.+++|.++||+|+..+-..+.+.+.+++.++....-.|
T Consensus 208 ~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~--~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV 285 (347)
T 1mx3_A 208 ALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLIN--DFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDV 285 (347)
T ss_dssp HHTCEECSSHHHHHHHCSEEEECCCCCTTCTTSBS--HHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESC
T ss_pred hcCCeecCCHHHHHhcCCEEEEcCCCCHHHHHHhH--HHHHhcCCCCCEEEECCCChHHhHHHHHHHHHhCCCcEEEEee
Confidence 45777778999999999999999999887776663 3456778999999999999999999999999987766443444
Q ss_pred CCC
Q 025140 90 SGS 92 (257)
Q Consensus 90 ~g~ 92 (257)
+..
T Consensus 286 ~~~ 288 (347)
T 1mx3_A 286 HES 288 (347)
T ss_dssp CSS
T ss_pred ccc
Confidence 443
No 100
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=97.52 E-value=3.3e-05 Score=68.32 Aligned_cols=85 Identities=9% Similarity=0.031 Sum_probs=68.4
Q ss_pred hhhhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEE
Q 025140 6 NAFYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 6 ~~~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~v 85 (257)
+.+.+.|++.++++.|++++||+|++++|..++.+.++. ...++.+++|.++||+++..+-....+.+.+++..+...
T Consensus 201 ~~~~~~g~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~--~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga 278 (351)
T 3jtm_A 201 ELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKTRGMFN--KELIGKLKKGVLIVNNARGAIMERQAVVDAVESGHIGGY 278 (351)
T ss_dssp HHHHHHCCEECSCHHHHGGGCSEEEECSCCCTTTTTCBS--HHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEE
T ss_pred HHHHhCCCeEcCCHHHHHhcCCEEEECCCCCHHHHHhhc--HHHHhcCCCCCEEEECcCchhhCHHHHHHHHHhCCccEE
Confidence 445667888889999999999999999998877776663 356677899999999999999999999999988766533
Q ss_pred EecCCCC
Q 025140 86 EAPVSGS 92 (257)
Q Consensus 86 dapV~g~ 92 (257)
--.|+..
T Consensus 279 ~lDV~~~ 285 (351)
T 3jtm_A 279 SGDVWDP 285 (351)
T ss_dssp EESCCSS
T ss_pred EeCCCCC
Confidence 3344443
No 101
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=97.51 E-value=4e-05 Score=67.33 Aligned_cols=91 Identities=13% Similarity=0.046 Sum_probs=70.2
Q ss_pred CCcchhhhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcC
Q 025140 2 KTPNNAFYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATG 81 (257)
Q Consensus 2 ~~~~~~~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G 81 (257)
|++.....+.|.+.++ +.|++++||+|++++|..++.+.++. ++.++.+++|.++||+|+..+-..+.+.+.+++..
T Consensus 172 ~~~~~~~~~~g~~~~~-l~ell~~aDvV~l~~P~t~~t~~li~--~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~ 248 (334)
T 2pi1_A 172 VVKREDLKEKGCVYTS-LDELLKESDVISLHVPYTKETHHMIN--EERISLMKDGVYLINTARGKVVDTDALYRAYQRGK 248 (334)
T ss_dssp SSCCHHHHHTTCEECC-HHHHHHHCSEEEECCCCCTTTTTCBC--HHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTC
T ss_pred CCcchhhHhcCceecC-HHHHHhhCCEEEEeCCCChHHHHhhC--HHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCC
Confidence 4444444456777655 99999999999999998887777663 35667889999999999999999999999998776
Q ss_pred CcEEEecCCCChHH
Q 025140 82 ASFLEAPVSGSKKP 95 (257)
Q Consensus 82 ~~~vdapV~g~~~~ 95 (257)
+...--.|+...+.
T Consensus 249 i~gA~lDV~~~EP~ 262 (334)
T 2pi1_A 249 FSGLGLDVFEDEEI 262 (334)
T ss_dssp EEEEEESCCTTHHH
T ss_pred ceEEEeecCCCCCC
Confidence 66544556665443
No 102
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=97.51 E-value=0.00077 Score=61.99 Aligned_cols=105 Identities=11% Similarity=0.151 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CCCHHHHHHHHhhcC-CCchhhhccccccccC-CC-----CCCC-
Q 025140 135 GAAMKLVVNMIMGSMMATFSEGLLHSEKV------GLDPNVLVEVVSQGA-ISAPMYSLKGPSMIES-LY-----PTAF- 200 (257)
Q Consensus 135 a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~------Gld~~~~~~~l~~~~-~~s~~~~~~~~~~~~~-~~-----~~~f- 200 (257)
++.+|.+.|.+.++++.+.+|.+.+.++. ++|...+.++.+.+. ..|++++...+.+.+. +. ++.|
T Consensus 316 ~~~~~~v~~al~~~~~~syaqGf~ll~~as~~~~w~l~~~~ia~~wr~Gciirs~~l~~i~~a~~~~~~l~~l~~~~~~~ 395 (482)
T 2pgd_A 316 KSFLEDIRKALYASKIISYAQGFMLLRQAATEFGWTLNYGGIALMWRGGCIIRSVFLGKIKDAFDRNPGLQNLLLDDFFK 395 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHTTSSSTTCBTHHHHHHHHHHHCTTCSCGGGSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhcCcchHHHHHHHHHHHHhcCCChhhhhcCHHHH
Confidence 89999999999999999999999998873 899999999998876 5888887654433221 11 1222
Q ss_pred -chhhHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHC
Q 025140 201 -PLKHQQKDLRLALGLAESVSQSTPIAAAANELYKVAKSH 239 (257)
Q Consensus 201 -~~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~ 239 (257)
.+.......+.++..+.+.|+|+|.+..++..|+.-...
T Consensus 396 ~~~~~~~~~~r~~v~~a~~~g~p~p~~s~al~~~~~~~~~ 435 (482)
T 2pgd_A 396 SAVENCQDSWRRAISTGVQAGIPMPCFTTALSFYDGYRHA 435 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcccC
Confidence 122234558889999999999999999999977765443
No 103
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=97.47 E-value=0.00013 Score=68.03 Aligned_cols=115 Identities=10% Similarity=0.007 Sum_probs=80.1
Q ss_pred hhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEe
Q 025140 8 FYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEA 87 (257)
Q Consensus 8 ~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vda 87 (257)
..+.|+..+ ++.|++++||+|++|+|..++++.++. +++++.+++|.++||+++..+-....+.+.+.+.++.....
T Consensus 180 a~~~g~~~~-~l~e~~~~aDvV~l~~P~~~~t~~~i~--~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g~i~ga~l 256 (529)
T 1ygy_A 180 AAQLGIELL-SLDDLLARADFISVHLPKTPETAGLID--KEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGL 256 (529)
T ss_dssp HHHHTCEEC-CHHHHHHHCSEEEECCCCSTTTTTCBC--HHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSEEEEEE
T ss_pred HHhcCcEEc-CHHHHHhcCCEEEECCCCchHHHHHhC--HHHHhCCCCCCEEEECCCCchhhHHHHHHHHHcCCccEEEE
Confidence 455687766 899999999999999999888877772 23667788999999999999988889999888765543333
Q ss_pred cCCCChHHhhc----CceEEEe---cC-ChhHHHH-----HHHHHHHhcCC
Q 025140 88 PVSGSKKPAED----GQLIFLA---AG-DKSLYNT-----VAPLLDIMGKS 125 (257)
Q Consensus 88 pV~g~~~~a~~----g~l~i~~---gg-~~~~~~~-----~~~ll~~~~~~ 125 (257)
.|+++.+.+.. ..-+++. || +.++.++ ++.+.+.++..
T Consensus 257 Dv~~~eP~~~~~L~~~~~vilTPh~~~~t~ea~~~~~~~~~~~l~~~l~~~ 307 (529)
T 1ygy_A 257 DVFATEPCTDSPLFELAQVVVTPHLGASTAEAQDRAGTDVAESVRLALAGE 307 (529)
T ss_dssp SSCSSSSCSCCGGGGCTTEEECSSCSSCBHHHHHHHHHHHHHHHHHHHTTC
T ss_pred eeccCCCCCCchHHhCCCEEEccccCCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence 46655443311 1113332 43 5566554 55666666543
No 104
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=97.39 E-value=4.8e-05 Score=66.52 Aligned_cols=77 Identities=5% Similarity=-0.002 Sum_probs=64.1
Q ss_pred ccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEecCCCCh
Q 025140 15 YQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSK 93 (257)
Q Consensus 15 ~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vdapV~g~~ 93 (257)
...++.|++++||+|++++|..++.+.++. .+.++.+++|.++||+|+..+-..+.+.+.+++..+...--.|+...
T Consensus 181 ~~~~l~ell~~aDvV~l~lPlt~~t~~li~--~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~E 257 (324)
T 3evt_A 181 AFTATADALATANFIVNALPLTPTTHHLFS--TELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQLSMAALDVTEPE 257 (324)
T ss_dssp EGGGCHHHHHHCSEEEECCCCCGGGTTCBS--HHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSCSEEEESSCSSS
T ss_pred ccCCHHHHHhhCCEEEEcCCCchHHHHhcC--HHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCceEEEeCCCCCC
Confidence 356889999999999999998888777663 35667889999999999999999999999998877776666666554
No 105
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=97.38 E-value=0.00012 Score=63.38 Aligned_cols=77 Identities=12% Similarity=0.048 Sum_probs=62.1
Q ss_pred CccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEecCC
Q 025140 12 RCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVS 90 (257)
Q Consensus 12 Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vdapV~ 90 (257)
|.....++.|++++||+|++|+|..++.+.++. ++.++.+++|.++||+|+..+-....+.+.+++..+...--.|+
T Consensus 161 ~~~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~--~~~l~~mk~gailin~srg~~vd~~aL~~aL~~g~i~gA~lDv~ 237 (303)
T 1qp8_A 161 PWRFTNSLEEALREARAAVCALPLNKHTRGLVK--YQHLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQFIFASDVW 237 (303)
T ss_dssp SSCCBSCSHHHHTTCSEEEECCCCSTTTTTCBC--HHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCC
T ss_pred CcccCCCHHHHHhhCCEEEEeCcCchHHHHHhC--HHHHhhCCCCCEEEECCCCcccCHHHHHHHHHhCCceEEEeccC
Confidence 455567899999999999999999988887762 25677899999999999999988889999998876554333344
No 106
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=97.34 E-value=0.00024 Score=62.19 Aligned_cols=75 Identities=11% Similarity=0.034 Sum_probs=60.3
Q ss_pred hhhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcE
Q 025140 7 AFYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASF 84 (257)
Q Consensus 7 ~~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ 84 (257)
.+.+.|.+.. ++.|++++||+|++++|....++.++. +.+++.+.+|.++||+|+..+.....+.+.+++.++..
T Consensus 193 ~~~~~g~~~~-~l~e~l~~aDvVi~~vp~~~~t~~~i~--~~~~~~mk~gailIn~srg~~v~~~aL~~aL~~~~i~g 267 (330)
T 2gcg_A 193 EAAEFQAEFV-STPELAAQSDFIVVACSLTPATEGLCN--KDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAA 267 (330)
T ss_dssp HHHTTTCEEC-CHHHHHHHCSEEEECCCCCTTTTTCBS--HHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSE
T ss_pred HHHhcCceeC-CHHHHHhhCCEEEEeCCCChHHHHhhC--HHHHhcCCCCcEEEECCCCcccCHHHHHHHHHcCCccE
Confidence 3455677766 899999999999999999877766652 24556788999999999999988889999998765543
No 107
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=97.33 E-value=9e-05 Score=66.82 Aligned_cols=80 Identities=11% Similarity=0.039 Sum_probs=60.4
Q ss_pred cCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEecCC
Q 025140 11 SRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVS 90 (257)
Q Consensus 11 ~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vdapV~ 90 (257)
.++..+.|+.|++++||+|++++|..++.+.++. .+.++.+++|.++||+|+..+-..+.+.+.+++..+...--.|+
T Consensus 194 ~~~~~~~sl~ell~~aDvV~lhvPlt~~T~~li~--~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~~g~i~gAalDVf 271 (416)
T 3k5p_A 194 GNVKPAASLDELLKTSDVVSLHVPSSKSTSKLIT--EAKLRKMKKGAFLINNARGSDVDLEALAKVLQEGHLAGAAIDVF 271 (416)
T ss_dssp TTBEECSSHHHHHHHCSEEEECCCC-----CCBC--HHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEECCC
T ss_pred cCcEecCCHHHHHhhCCEEEEeCCCCHHHhhhcC--HHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCccEEEeCCC
Confidence 3566788999999999999999999988887763 34667799999999999999999999999998765543334445
Q ss_pred CC
Q 025140 91 GS 92 (257)
Q Consensus 91 g~ 92 (257)
..
T Consensus 272 ~~ 273 (416)
T 3k5p_A 272 PV 273 (416)
T ss_dssp SS
T ss_pred CC
Confidence 44
No 108
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=97.32 E-value=0.00013 Score=64.34 Aligned_cols=82 Identities=7% Similarity=-0.061 Sum_probs=64.6
Q ss_pred hcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEecC
Q 025140 10 YSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPV 89 (257)
Q Consensus 10 ~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vdapV 89 (257)
+.+.... ++.|++++||+|++++|..++.+.++. .+.++.+++|.++||+|+..+-..+.+.+.+++..+...--.|
T Consensus 186 ~~~~~~~-~l~ell~~aDvV~l~~Plt~~t~~li~--~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~LDV 262 (343)
T 2yq5_A 186 EPFLTYT-DFDTVLKEADIVSLHTPLFPSTENMIG--EKQLKEMKKSAYLINCARGELVDTGALIKALQDGEIAGAGLDT 262 (343)
T ss_dssp TTTCEEC-CHHHHHHHCSEEEECCCCCTTTTTCBC--HHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSCEEESC
T ss_pred hcccccc-CHHHHHhcCCEEEEcCCCCHHHHHHhh--HHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCCcEEEecc
Confidence 3444444 999999999999999998877776663 3456778999999999999999999999999887665444445
Q ss_pred CCChH
Q 025140 90 SGSKK 94 (257)
Q Consensus 90 ~g~~~ 94 (257)
+...+
T Consensus 263 ~~~EP 267 (343)
T 2yq5_A 263 LAGES 267 (343)
T ss_dssp CTTGG
T ss_pred cccCC
Confidence 55544
No 109
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=97.30 E-value=0.00013 Score=64.08 Aligned_cols=71 Identities=10% Similarity=0.072 Sum_probs=59.1
Q ss_pred CccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcE
Q 025140 12 RCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASF 84 (257)
Q Consensus 12 Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ 84 (257)
|.....++.|++++||+|++++|...+++.++. +..++.+++|.++||+|+..+.....+.+.+++.++..
T Consensus 202 g~~~~~~l~ell~~aDvVil~vP~~~~t~~li~--~~~l~~mk~gailIn~srG~~vd~~aL~~aL~~g~i~g 272 (333)
T 3ba1_A 202 NYTYYGSVVELASNSDILVVACPLTPETTHIIN--REVIDALGPKGVLINIGRGPHVDEPELVSALVEGRLGG 272 (333)
T ss_dssp CSEEESCHHHHHHTCSEEEECSCCCGGGTTCBC--HHHHHHHCTTCEEEECSCGGGBCHHHHHHHHHHTSSCE
T ss_pred CceecCCHHHHHhcCCEEEEecCCChHHHHHhh--HHHHhcCCCCCEEEECCCCchhCHHHHHHHHHcCCCeE
Confidence 666678999999999999999999877776662 23556778999999999999998999999998866653
No 110
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=97.30 E-value=9.4e-05 Score=66.30 Aligned_cols=76 Identities=7% Similarity=-0.000 Sum_probs=62.1
Q ss_pred hhhhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCc
Q 025140 6 NAFYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGAS 83 (257)
Q Consensus 6 ~~~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~ 83 (257)
+...+.|++.+.++.|++++||+|++++|..++.+.++. +..++.+++|.++||+++..+-..+.+.+.+++..+.
T Consensus 228 ~~~~~~G~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~--~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ 303 (393)
T 2nac_A 228 SVEKELNLTWHATREDMYPVCDVVTLNCPLHPETEHMIN--DETLKLFKRGAYIVNTARGKLCDRDAVARALESGRLA 303 (393)
T ss_dssp HHHHHHTCEECSSHHHHGGGCSEEEECSCCCTTTTTCBS--HHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTTSEE
T ss_pred hhHhhcCceecCCHHHHHhcCCEEEEecCCchHHHHHhh--HHHHhhCCCCCEEEECCCchHhhHHHHHHHHHcCCee
Confidence 334556888778999999999999999998877776662 2456778999999999999998888999999875544
No 111
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=97.28 E-value=0.00012 Score=63.95 Aligned_cols=74 Identities=9% Similarity=0.010 Sum_probs=60.5
Q ss_pred hhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCc
Q 025140 8 FYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGAS 83 (257)
Q Consensus 8 ~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~ 83 (257)
..+.|++.++++.|++++||+|++|+|...+.+.++. +..++.+++|.++||+++..+-....+.+.+++.++.
T Consensus 185 ~~~~g~~~~~~l~ell~~aDvVil~~p~~~~t~~~i~--~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~g~i~ 258 (320)
T 1gdh_A 185 EASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFN--KATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLA 258 (320)
T ss_dssp HHHHTCEECSSHHHHHHHCSEEEECCCCCTTTTTCBS--HHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred hhhcCcEEcCCHHHHHhhCCEEEEeccCchHHHhhcC--HHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCc
Confidence 3456888777999999999999999998877776662 2456778999999999999888888899889876544
No 112
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=97.28 E-value=9.6e-05 Score=65.25 Aligned_cols=83 Identities=12% Similarity=-0.023 Sum_probs=63.9
Q ss_pred hhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEe
Q 025140 8 FYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEA 87 (257)
Q Consensus 8 ~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vda 87 (257)
..+.|.+.++++.|++++||+|++|+|...+++.++. ..+++.+++|.++||+|+..+.....+.+.+++..+...--
T Consensus 203 ~~~~g~~~~~~l~ell~~aDvVil~vp~~~~t~~li~--~~~l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~gagl 280 (348)
T 2w2k_A 203 EKALGAERVDSLEELARRSDCVSVSVPYMKLTHHLID--EAFFAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGL 280 (348)
T ss_dssp HHHHTCEECSSHHHHHHHCSEEEECCCCSGGGTTCBC--HHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEE
T ss_pred HhhcCcEEeCCHHHHhccCCEEEEeCCCChHHHHHhh--HHHHhcCCCCCEEEECCCCchhCHHHHHHHHHhCCceEEEe
Confidence 4445888778999999999999999999887776663 23556788999999999999988889999998754433333
Q ss_pred cCCCC
Q 025140 88 PVSGS 92 (257)
Q Consensus 88 pV~g~ 92 (257)
.|++.
T Consensus 281 Dv~~~ 285 (348)
T 2w2k_A 281 DVHEF 285 (348)
T ss_dssp SSCTT
T ss_pred ccCCC
Confidence 44443
No 113
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=97.27 E-value=0.00013 Score=64.75 Aligned_cols=76 Identities=11% Similarity=0.000 Sum_probs=63.5
Q ss_pred hhhhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCc
Q 025140 6 NAFYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGAS 83 (257)
Q Consensus 6 ~~~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~ 83 (257)
+.+.+.|++..+++.|++++||+|++|+|..++.+.++. +..++.+++|.++||+++..+-..+.+.+.+++.++.
T Consensus 202 ~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~--~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~~g~i~ 277 (364)
T 2j6i_A 202 DAEEKVGARRVENIEELVAQADIVTVNAPLHAGTKGLIN--KELLSKFKKGAWLVNTARGAICVAEDVAAALESGQLR 277 (364)
T ss_dssp HHHHHTTEEECSSHHHHHHTCSEEEECCCCSTTTTTCBC--HHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred hHHHhcCcEecCCHHHHHhcCCEEEECCCCChHHHHHhC--HHHHhhCCCCCEEEECCCCchhCHHHHHHHHHcCCCc
Confidence 335567888788999999999999999999888777662 2456778999999999999998889999999887654
No 114
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=97.25 E-value=0.00017 Score=63.34 Aligned_cols=81 Identities=10% Similarity=-0.014 Sum_probs=64.1
Q ss_pred hhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCc--EE
Q 025140 8 FYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGAS--FL 85 (257)
Q Consensus 8 ~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~--~v 85 (257)
..+.|++. .++.|++++||+|++|+|..++.+.++. ++.++.+++|.++||+|+..+-....+.+.+++..+. .+
T Consensus 203 ~~~~g~~~-~~l~ell~~aDvV~l~~P~t~~t~~li~--~~~l~~mk~gailIN~arg~vvd~~aL~~aL~~g~i~gA~l 279 (335)
T 2g76_A 203 SASFGVQQ-LPLEEIWPLCDFITVHTPLLPSTTGLLN--DNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAAL 279 (335)
T ss_dssp HHHTTCEE-CCHHHHGGGCSEEEECCCCCTTTTTSBC--HHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEE
T ss_pred hhhcCcee-CCHHHHHhcCCEEEEecCCCHHHHHhhC--HHHHhhCCCCcEEEECCCccccCHHHHHHHHHhCCccEEEE
Confidence 44567764 5899999999999999999888777762 2467788999999999999998888999999876544 35
Q ss_pred EecCCCCh
Q 025140 86 EAPVSGSK 93 (257)
Q Consensus 86 dapV~g~~ 93 (257)
| |+...
T Consensus 280 D--V~~~E 285 (335)
T 2g76_A 280 D--VFTEE 285 (335)
T ss_dssp S--CCSSS
T ss_pred e--ecCCC
Confidence 5 55443
No 115
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=97.25 E-value=0.00012 Score=64.27 Aligned_cols=81 Identities=14% Similarity=-0.012 Sum_probs=64.7
Q ss_pred hhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEe
Q 025140 8 FYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEA 87 (257)
Q Consensus 8 ~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vda 87 (257)
..+.|++.. ++.|++++||+|++++|...+.+.++. ++.++.+++|.++||+++..+-....+.+.+++.++...--
T Consensus 184 ~~~~g~~~~-~l~ell~~aDvV~l~~P~t~~t~~li~--~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~l 260 (330)
T 4e5n_A 184 EQRLGLRQV-ACSELFASSDFILLALPLNADTLHLVN--AELLALVRPGALLVNPCRGSVVDEAAVLAALERGQLGGYAA 260 (330)
T ss_dssp HHHHTEEEC-CHHHHHHHCSEEEECCCCSTTTTTCBC--HHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEE
T ss_pred HHhcCceeC-CHHHHHhhCCEEEEcCCCCHHHHHHhC--HHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCccEEEe
Confidence 445577654 899999999999999998877776663 35677899999999999999999999999999887664333
Q ss_pred cCCC
Q 025140 88 PVSG 91 (257)
Q Consensus 88 pV~g 91 (257)
.|+.
T Consensus 261 DV~~ 264 (330)
T 4e5n_A 261 DVFE 264 (330)
T ss_dssp SCCG
T ss_pred cccc
Confidence 3443
No 116
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=97.21 E-value=0.00028 Score=62.58 Aligned_cols=81 Identities=15% Similarity=0.092 Sum_probs=62.6
Q ss_pred hhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEe
Q 025140 8 FYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEA 87 (257)
Q Consensus 8 ~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vda 87 (257)
+.+.|++. .++.|++++||+|++++|...+.+.++. .+.++.+++|.++||+|+..+-....+.+.+++..+. .--
T Consensus 214 ~~~~g~~~-~~l~ell~~aDvV~l~~Plt~~T~~li~--~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~-aaL 289 (365)
T 4hy3_A 214 LEENGVEP-ASLEDVLTKSDFIFVVAAVTSENKRFLG--AEAFSSMRRGAAFILLSRADVVDFDALMAAVSSGHIV-AAS 289 (365)
T ss_dssp HHHTTCEE-CCHHHHHHSCSEEEECSCSSCC---CCC--HHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSE-EEE
T ss_pred HhhcCeee-CCHHHHHhcCCEEEEcCcCCHHHHhhcC--HHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcCCce-EEe
Confidence 45567764 5899999999999999999888887773 3567789999999999999999999999999876554 223
Q ss_pred cCCCC
Q 025140 88 PVSGS 92 (257)
Q Consensus 88 pV~g~ 92 (257)
.|+..
T Consensus 290 DV~~~ 294 (365)
T 4hy3_A 290 DVYPE 294 (365)
T ss_dssp SCCSS
T ss_pred eCCCC
Confidence 44443
No 117
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=97.16 E-value=0.00019 Score=62.27 Aligned_cols=73 Identities=10% Similarity=-0.034 Sum_probs=59.6
Q ss_pred hhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCc
Q 025140 8 FYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGAS 83 (257)
Q Consensus 8 ~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~ 83 (257)
+.+.|++.. ++.|++++||+|++|+|...+.+.++. +..++.+++|.++||+|+..+-....+.+.+++..+.
T Consensus 180 ~~~~g~~~~-~l~ell~~aDvV~l~~p~~~~t~~li~--~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g~i~ 252 (307)
T 1wwk_A 180 AKEVNGKFV-DLETLLKESDVVTIHVPLVESTYHLIN--EERLKLMKKTAILINTSRGPVVDTNALVKALKEGWIA 252 (307)
T ss_dssp HHHTTCEEC-CHHHHHHHCSEEEECCCCSTTTTTCBC--HHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSS
T ss_pred HhhcCcccc-CHHHHHhhCCEEEEecCCChHHhhhcC--HHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhCCCc
Confidence 445677654 899999999999999999887776652 2456778999999999999998888999999886654
No 118
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=97.14 E-value=0.00043 Score=60.64 Aligned_cols=80 Identities=5% Similarity=-0.044 Sum_probs=62.1
Q ss_pred hcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEecC
Q 025140 10 YSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPV 89 (257)
Q Consensus 10 ~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vdapV 89 (257)
+.|... .++.+++++||+|++|+|....++.++. +.+++.+.++.++||+|+..+-....+.+.+++.++...--.|
T Consensus 190 ~~g~~~-~~l~~~l~~aDvVil~vp~~~~t~~~i~--~~~~~~mk~~ailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv 266 (334)
T 2dbq_A 190 ELNAEF-KPLEDLLRESDFVVLAVPLTRETYHLIN--EERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDV 266 (334)
T ss_dssp HHCCEE-CCHHHHHHHCSEEEECCCCCTTTTTCBC--HHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESC
T ss_pred hcCccc-CCHHHHHhhCCEEEECCCCChHHHHhhC--HHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCeeEEEecC
Confidence 457665 5899999999999999999887776662 2456678899999999999999888999999886665533335
Q ss_pred CCC
Q 025140 90 SGS 92 (257)
Q Consensus 90 ~g~ 92 (257)
++.
T Consensus 267 ~~~ 269 (334)
T 2dbq_A 267 FEE 269 (334)
T ss_dssp CSS
T ss_pred CCC
Confidence 543
No 119
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=97.12 E-value=0.00021 Score=62.68 Aligned_cols=71 Identities=14% Similarity=0.046 Sum_probs=58.9
Q ss_pred CccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcE
Q 025140 12 RCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASF 84 (257)
Q Consensus 12 Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ 84 (257)
+++..+++.|++++||+|++|+|...+.+.++. +..++.+++|.++||+|+..+-..+.+.+.+++.++..
T Consensus 186 ~~~~~~~l~ell~~aDvV~l~~p~~~~t~~li~--~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~g 256 (333)
T 1j4a_A 186 KGYYVDSLDDLYKQADVISLHVPDVPANVHMIN--DESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSGKIFG 256 (333)
T ss_dssp TTCBCSCHHHHHHHCSEEEECSCCCGGGTTCBS--HHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEE
T ss_pred hCeecCCHHHHHhhCCEEEEcCCCcHHHHHHHh--HHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceE
Confidence 455666899999999999999999887776652 24567788999999999999999999999998876553
No 120
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=97.09 E-value=0.00015 Score=65.27 Aligned_cols=73 Identities=11% Similarity=0.072 Sum_probs=61.1
Q ss_pred CccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCc--EEE
Q 025140 12 RCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGAS--FLE 86 (257)
Q Consensus 12 Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~--~vd 86 (257)
+++.+.|+.|++++||+|++++|..++.+.++. ++.++.+++|.++||+|+..+-..+.+.+.+++..+. .+|
T Consensus 184 ~~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~--~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g~i~gA~lD 258 (404)
T 1sc6_A 184 NATQVQHLSDLLNMSDVVSLHVPENPSTKNMMG--AKEISLMKPGSLLINASRGTVVDIPALADALASKHLAGAAID 258 (404)
T ss_dssp TCEECSCHHHHHHHCSEEEECCCSSTTTTTCBC--HHHHHHSCTTEEEEECSCSSSBCHHHHHHHHHTTSEEEEEEE
T ss_pred CceecCCHHHHHhcCCEEEEccCCChHHHHHhh--HHHHhhcCCCeEEEECCCChHHhHHHHHHHHHcCCccEEEEe
Confidence 466778999999999999999999988887763 3466789999999999999999989999999875443 466
No 121
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=97.08 E-value=0.00014 Score=63.17 Aligned_cols=83 Identities=14% Similarity=-0.042 Sum_probs=62.7
Q ss_pred hhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEe
Q 025140 8 FYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEA 87 (257)
Q Consensus 8 ~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vda 87 (257)
..+.|++. .++.|++++||+|++|+|...+.+.++. +..++.+++|.++||+++..+-....+.+.+++.++.-.--
T Consensus 180 ~~~~g~~~-~~l~ell~~aDvVvl~~P~~~~t~~li~--~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~ga~l 256 (313)
T 2ekl_A 180 AEKINAKA-VSLEELLKNSDVISLHVTVSKDAKPIID--YPQFELMKDNVIIVNTSRAVAVNGKALLDYIKKGKVYAYAT 256 (313)
T ss_dssp HHHTTCEE-CCHHHHHHHCSEEEECCCCCTTSCCSBC--HHHHHHSCTTEEEEESSCGGGBCHHHHHHHHHTTCEEEEEE
T ss_pred HHhcCcee-cCHHHHHhhCCEEEEeccCChHHHHhhC--HHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCCcEEEE
Confidence 34568775 4899999999999999998877666552 24556788999999999999988899999998765542222
Q ss_pred cCCCCh
Q 025140 88 PVSGSK 93 (257)
Q Consensus 88 pV~g~~ 93 (257)
-|+...
T Consensus 257 Dv~~~e 262 (313)
T 2ekl_A 257 DVFWNE 262 (313)
T ss_dssp SCCSSS
T ss_pred ecCCCC
Confidence 344443
No 122
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=97.00 E-value=0.00023 Score=63.43 Aligned_cols=79 Identities=11% Similarity=0.011 Sum_probs=64.4
Q ss_pred cccCCHHHHHhcCCEEEEecCChHH----HHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEecC
Q 025140 14 RYQPSPDEVAASCDVTFAMLADPES----AMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPV 89 (257)
Q Consensus 14 ~~~~s~~ea~~~advvi~~l~~~~~----v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vdapV 89 (257)
....++.|++++||+|++++|..++ .+.++. .+.++.+++|.++||+|+..+-..+.+.+.+++.++...--.|
T Consensus 159 ~~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~li~--~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDV 236 (381)
T 3oet_A 159 GDFRTLDELVQEADVLTFHTPLYKDGPYKTLHLAD--ETLIRRLKPGAILINACRGPVVDNAALLARLNAGQPLSVVLDV 236 (381)
T ss_dssp SCBCCHHHHHHHCSEEEECCCCCCSSTTCCTTSBC--HHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESC
T ss_pred cccCCHHHHHhhCCEEEEcCcCCccccccchhhcC--HHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCCeEEEeec
Confidence 4567999999999999999998776 666652 3466778999999999999999999999999987776655566
Q ss_pred CCChH
Q 025140 90 SGSKK 94 (257)
Q Consensus 90 ~g~~~ 94 (257)
+...+
T Consensus 237 ~e~EP 241 (381)
T 3oet_A 237 WEGEP 241 (381)
T ss_dssp CTTTT
T ss_pred cccCC
Confidence 65543
No 123
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=96.99 E-value=0.00035 Score=61.25 Aligned_cols=75 Identities=12% Similarity=0.059 Sum_probs=60.2
Q ss_pred CCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEecCCCCh
Q 025140 17 PSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSK 93 (257)
Q Consensus 17 ~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vdapV~g~~ 93 (257)
.++.|++++||+|++|+|..++.+.++. ++.++.+++|.++||+|+..+-..+.+.+.+++.++.-.---|+-..
T Consensus 189 ~~l~ell~~aDvV~~~~P~~~~t~~li~--~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~E 263 (333)
T 1dxy_A 189 VSLEDLFKQSDVIDLHVPGIEQNTHIIN--EAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSGKLAGVGIDTYEYE 263 (333)
T ss_dssp CCHHHHHHHCSEEEECCCCCGGGTTSBC--HHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEESSCTTH
T ss_pred CCHHHHHhcCCEEEEcCCCchhHHHHhC--HHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCccEEEEecCCCC
Confidence 4899999999999999999888777662 24667789999999999999999999999998766553333355443
No 124
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=96.98 E-value=0.0011 Score=56.89 Aligned_cols=199 Identities=10% Similarity=0.048 Sum_probs=115.1
Q ss_pred CHHHHH-hcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCC-CCHHHHHHHHHHHHH----cCCcEEEecCCC
Q 025140 18 SPDEVA-ASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVST-VDGDTSKLINGHIKA----TGASFLEAPVSG 91 (257)
Q Consensus 18 s~~ea~-~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST-~~p~~~~~la~~~~~----~G~~~vdapV~g 91 (257)
++.+.+ ..+|+||+|++.. ++++++ +.+.+.+.++++||.+.. +...+. +.. .|..+..+-..
T Consensus 54 ~~~~~~~~~~D~vilavk~~-~~~~~l---~~l~~~l~~~~~iv~~~nGi~~~~~------~~~~~v~~g~~~~~a~~~- 122 (294)
T 3g17_A 54 KGYEDVTNTFDVIIIAVKTH-QLDAVI---PHLTYLAHEDTLIILAQNGYGQLEH------IPFKNVCQAVVYISGQKK- 122 (294)
T ss_dssp EEGGGCCSCEEEEEECSCGG-GHHHHG---GGHHHHEEEEEEEEECCSSCCCGGG------CCCSCEEECEEEEEEEEE-
T ss_pred CchHhcCCCCCEEEEeCCcc-CHHHHH---HHHHHhhCCCCEEEEeccCcccHhh------CCCCcEEEEEEEEEEEEc-
Confidence 455654 7899999999975 677787 556555666777777765 333322 111 12222222222
Q ss_pred ChHHhhcCceEEEecCChhHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHHHHH--------------------HHHH
Q 025140 92 SKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMG--------------------SMMA 151 (257)
Q Consensus 92 ~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~~~--------------------~~~~ 151 (257)
+|..+..+.-.+.+ ++.+..+++..+|+.-+-++++..++-...--|++.|..+. ....
T Consensus 123 ~pg~v~~~~~~~~~-~~~~~~~~l~~~l~~~~~~~~~~~di~~~~w~Kl~~N~~inl~al~~~~~g~~l~~~~~~~l~~~ 201 (294)
T 3g17_A 123 GDVVTHFRDYQLRI-QDNALTRQFRDLVQDSQIDIVLEANIQQAIWYKLLVNLGINSITALGRQTVAIMHNPEIRILCRQ 201 (294)
T ss_dssp TTEEEEEEEEEEEE-ECSHHHHHHHHHTTTSSCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTSCGGGGGSHHHHHHHHH
T ss_pred CCCEEEECCCEEec-CccHHHHHHHHHHHhCCCceEEChHHHHHHHHHHHHHHHHHHHHHHCCChHHHHcCHHHHHHHHH
Confidence 22222222112223 45555677777777666666666667788889988887321 2235
Q ss_pred HHHHHHHHHHHcCCC--HHHHHHHHhh---c-C-CCchhhhccccccccCCCCCCCchhhHHHHHHHHHHHHHhcCCCcH
Q 025140 152 TFSEGLLHSEKVGLD--PNVLVEVVSQ---G-A-ISAPMYSLKGPSMIESLYPTAFPLKHQQKDLRLALGLAESVSQSTP 224 (257)
Q Consensus 152 ~~~Ea~~la~~~Gld--~~~~~~~l~~---~-~-~~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~g~~~p 224 (257)
++.|+..++++.|++ .+.+.+.+.. . . ..|.+++. +..|.. .-++.. ...+++.++++|+++|
T Consensus 202 ~~~E~~~va~a~G~~l~~~~~~~~~~~~~~~~~~~~sSM~qD----~~~gr~---tEid~i---~G~vv~~a~~~gv~~P 271 (294)
T 3g17_A 202 LLLDGCRVAQAEGLNFSEQTVDTIMTIYQGYPDEMGTSMYYD----IVHQQP---LEVEAI---QGFIYRRAREHNLDTP 271 (294)
T ss_dssp HHHHHHHHHHHTTCCCCHHHHHHHHHHHHTSCTTCCCHHHHH----HHTTCC---CSGGGT---HHHHHHHHHHTTCCCH
T ss_pred HHHHHHHHHHHcCCCCCHHHHHHHHHHHhhcCCCCCCcHHHH----HHcCCC---ccHHHh---hhHHHHHHHHhCCCCC
Confidence 778999999999975 4434343332 1 1 12222221 111111 112222 4567899999999999
Q ss_pred HHHHHHHHHHHHHH
Q 025140 225 IAAAANELYKVAKS 238 (257)
Q Consensus 225 ~~~~~~~~~~~a~~ 238 (257)
..+.+.++.+...+
T Consensus 272 ~~~~l~~ll~~~e~ 285 (294)
T 3g17_A 272 YLDTIYSFLRAYQQ 285 (294)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHh
Confidence 99999988876643
No 125
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=96.94 E-value=0.00036 Score=61.09 Aligned_cols=76 Identities=14% Similarity=0.024 Sum_probs=60.0
Q ss_pred cCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEecCCCCh
Q 025140 16 QPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSK 93 (257)
Q Consensus 16 ~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vdapV~g~~ 93 (257)
..++.|++++||+|++|+|...+.+.++. ++.++.+++|.++||+|+..+-..+.+.+.+++.++...---|+...
T Consensus 189 ~~~l~ell~~aDvV~~~~p~t~~t~~li~--~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~E 264 (331)
T 1xdw_A 189 QVSLDEVLEKSDIITIHAPYIKENGAVVT--RDFLKKMKDGAILVNCARGQLVDTEAVIEAVESGKLGGYGCDVLDGE 264 (331)
T ss_dssp ECCHHHHHHHCSEEEECCCCCTTTCCSBC--HHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTG
T ss_pred cCCHHHHHhhCCEEEEecCCchHHHHHhC--HHHHhhCCCCcEEEECCCcccccHHHHHHHHHhCCceEEEEecCCCC
Confidence 35899999999999999999877766652 24567789999999999999999999999998876654333345443
No 126
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=96.85 E-value=0.00052 Score=59.56 Aligned_cols=65 Identities=9% Similarity=-0.044 Sum_probs=54.3
Q ss_pred cCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCc
Q 025140 16 QPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGAS 83 (257)
Q Consensus 16 ~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~ 83 (257)
..++.|++++||+|++++|..++.+.++. +..++.+++|.++||+|+..+-....+.+.++ ..+.
T Consensus 184 ~~~l~ell~~aDvV~l~~p~~~~t~~li~--~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~-g~i~ 248 (311)
T 2cuk_A 184 FLSLEELLKEADVVSLHTPLTPETHRLLN--RERLFAMKRGAILLNTARGALVDTEALVEALR-GHLF 248 (311)
T ss_dssp BCCHHHHHHHCSEEEECCCCCTTTTTCBC--HHHHTTSCTTCEEEECSCGGGBCHHHHHHHHT-TTSS
T ss_pred cCCHHHHHhhCCEEEEeCCCChHHHhhcC--HHHHhhCCCCcEEEECCCCCccCHHHHHHHHh-CcCC
Confidence 56899999999999999999887777662 24567789999999999999988888999888 5554
No 127
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=96.82 E-value=8.9e-05 Score=65.52 Aligned_cols=69 Identities=16% Similarity=0.158 Sum_probs=55.5
Q ss_pred ccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEec
Q 025140 13 CRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAP 88 (257)
Q Consensus 13 a~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vdap 88 (257)
.+.++++.|+++++|+||+|+|+.. ...++. .+.+.+|+.|++++|..|+ .+++...+..++..|+|..
T Consensus 182 ~~~~~~~~eav~~aDiVi~aTps~~-~~pvl~-----~~~l~~G~~V~~vgs~~p~-~~El~~~~~~~a~v~vD~~ 250 (350)
T 1x7d_A 182 IRRASSVAEAVKGVDIITTVTADKA-YATIIT-----PDMLEPGMHLNAVGGDCPG-KTELHADVLRNARVFVEYE 250 (350)
T ss_dssp EEECSSHHHHHTTCSEEEECCCCSS-EEEEEC-----GGGCCTTCEEEECSCCBTT-BEEECHHHHHTSEEEESSH
T ss_pred EEEeCCHHHHHhcCCEEEEeccCCC-CCceec-----HHHcCCCCEEEECCCCCCC-ceeeCHHHHhcCcEEECCH
Confidence 4568999999999999999999862 222331 1356799999999999999 7889888888888999973
No 128
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=96.71 E-value=0.00058 Score=59.40 Aligned_cols=74 Identities=5% Similarity=-0.036 Sum_probs=59.8
Q ss_pred CCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEecCCCC
Q 025140 17 PSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGS 92 (257)
Q Consensus 17 ~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vdapV~g~ 92 (257)
.++.|++++||+|++++|..++.+.++. .+.++.+++|.++||+|...+-..+.+.+.+++..+...--.|+..
T Consensus 185 ~~l~ell~~aDiV~l~~Plt~~t~~li~--~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~ 258 (315)
T 3pp8_A 185 EELRAFLNQTRVLINLLPNTAQTVGIIN--SELLDQLPDGAYVLNLARGVHVQEADLLAALDSGKLKGAMLDVFSQ 258 (315)
T ss_dssp HHHHHHHHTCSEEEECCCCCGGGTTCBS--HHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSS
T ss_pred CCHHHHHhhCCEEEEecCCchhhhhhcc--HHHHhhCCCCCEEEECCCChhhhHHHHHHHHHhCCccEEEcCCCCC
Confidence 5889999999999999998888777662 3466788999999999999999999999999877655433345544
No 129
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=96.65 E-value=0.00044 Score=59.51 Aligned_cols=97 Identities=20% Similarity=0.243 Sum_probs=67.3
Q ss_pred hhhcCccc--cCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEE
Q 025140 8 FYYSRCRY--QPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 8 ~~~~Ga~~--~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~v 85 (257)
+.+.|.+. ..++.|+++++|+||+++|.. + .+ +..++.++++.++||++..+..+. + +....+|+.++
T Consensus 196 ~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~~-----~-i~-~~~~~~mk~g~~lin~a~g~~~~~--~-~~a~~~G~~~i 265 (300)
T 2rir_A 196 ITEMGLVPFHTDELKEHVKDIDICINTIPSM-----I-LN-QTVLSSMTPKTLILDLASRPGGTD--F-KYAEKQGIKAL 265 (300)
T ss_dssp HHHTTCEEEEGGGHHHHSTTCSEEEECCSSC-----C-BC-HHHHTTSCTTCEEEECSSTTCSBC--H-HHHHHHTCEEE
T ss_pred HHHCCCeEEchhhHHHHhhCCCEEEECCChh-----h-hC-HHHHHhCCCCCEEEEEeCCCCCcC--H-HHHHHCCCEEE
Confidence 33456653 368889999999999999972 1 12 124466789999999998654442 3 45667899999
Q ss_pred Eec-CCCChHHhhcCceEEEecCChhHHHHHHHHHHHhc
Q 025140 86 EAP-VSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMG 123 (257)
Q Consensus 86 dap-V~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~ 123 (257)
++| +.+...++..+.+. ++.+.+++..+.
T Consensus 266 ~~pg~~g~v~~a~a~~l~---------~~~~~~~l~~~~ 295 (300)
T 2rir_A 266 LAPGLPGIVAPKTAGQIL---------ANVLSKLLAEIQ 295 (300)
T ss_dssp ECCCHHHHHCHHHHHHHH---------HHHHHHHHHHHH
T ss_pred ECCCCCCcHHHHHHHHHH---------HHHHHHHHHHhc
Confidence 999 77777666666543 455666666553
No 130
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=96.63 E-value=0.00069 Score=60.37 Aligned_cols=67 Identities=12% Similarity=0.021 Sum_probs=56.4
Q ss_pred cCCHHHHHhcCCEEEEecCChHH----HHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcE
Q 025140 16 QPSPDEVAASCDVTFAMLADPES----AMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASF 84 (257)
Q Consensus 16 ~~s~~ea~~~advvi~~l~~~~~----v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ 84 (257)
..++.|++++||+|++|+|...+ .+.++. ++.++.+++|.++||+|+..+-..+.+.+.+++.++..
T Consensus 158 ~~~l~ell~~aDvV~l~~Plt~~g~~~T~~li~--~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~~g~i~~ 228 (380)
T 2o4c_A 158 FVSLERLLAEADVISLHTPLNRDGEHPTRHLLD--EPRLAALRPGTWLVNASRGAVVDNQALRRLLEGGADLE 228 (380)
T ss_dssp CCCHHHHHHHCSEEEECCCCCSSSSSCCTTSBC--HHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEE
T ss_pred cCCHHHHHHhCCEEEEeccCccccccchhhhcC--HHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCce
Confidence 57899999999999999998777 666652 34667899999999999999999999999998766543
No 131
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=96.63 E-value=0.00059 Score=59.76 Aligned_cols=78 Identities=14% Similarity=0.089 Sum_probs=59.5
Q ss_pred hcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEecC
Q 025140 10 YSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPV 89 (257)
Q Consensus 10 ~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vdapV 89 (257)
+.|+... ++.+++++||+|++|+|...+++.++. +.+++.+++| ++||+|+..+-...++.+.+++..+...--.|
T Consensus 186 ~~g~~~~-~l~e~l~~aDiVil~vp~~~~t~~~i~--~~~~~~mk~g-ilin~srg~~vd~~aL~~aL~~~~i~gaglDv 261 (333)
T 2d0i_A 186 ELKARYM-DIDELLEKSDIVILALPLTRDTYHIIN--EERVKKLEGK-YLVNIGRGALVDEKAVTEAIKQGKLKGYATDV 261 (333)
T ss_dssp HHTEEEC-CHHHHHHHCSEEEECCCCCTTTTTSBC--HHHHHHTBTC-EEEECSCGGGBCHHHHHHHHHTTCBCEEEESC
T ss_pred hcCceec-CHHHHHhhCCEEEEcCCCChHHHHHhC--HHHHhhCCCC-EEEECCCCcccCHHHHHHHHHcCCceEEEecC
Confidence 4576654 899999999999999999877777762 2345678889 99999999998888899888875554433334
Q ss_pred CC
Q 025140 90 SG 91 (257)
Q Consensus 90 ~g 91 (257)
++
T Consensus 262 ~~ 263 (333)
T 2d0i_A 262 FE 263 (333)
T ss_dssp CS
T ss_pred CC
Confidence 44
No 132
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=96.49 E-value=0.011 Score=54.20 Aligned_cols=161 Identities=11% Similarity=0.012 Sum_probs=89.2
Q ss_pred hhhhcCcccc----CCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCC
Q 025140 7 AFYYSRCRYQ----PSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGA 82 (257)
Q Consensus 7 ~~~~~Ga~~~----~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~ 82 (257)
...+.|...+ .++.|++++||+||+++|+... .+|+ +++.+.+.+|++|+.+.-.+.....+-...+ ..++
T Consensus 99 ~A~e~G~~v~d~ta~s~aEAa~~ADVVILaVP~~~~-~eVl---~eI~p~LK~GaILs~AaGf~I~~le~~~i~~-p~dv 173 (525)
T 3fr7_A 99 EARAAGFTEESGTLGDIWETVSGSDLVLLLISDAAQ-ADNY---EKIFSHMKPNSILGLSHGFLLGHLQSAGLDF-PKNI 173 (525)
T ss_dssp HHHHTTCCTTTTCEEEHHHHHHHCSEEEECSCHHHH-HHHH---HHHHHHSCTTCEEEESSSHHHHHHHHTTCCC-CTTS
T ss_pred HHHHCCCEEecCCCCCHHHHHhcCCEEEECCChHHH-HHHH---HHHHHhcCCCCeEEEeCCCCHHHHhhhcccC-CCCC
Confidence 3456788763 7899999999999999998666 4577 4688889999998777664443322100011 1344
Q ss_pred cEE-EecCCCChH---Hh--h-----cCce-EEEecCCh--hHHHHHHHHHHHhcCCceecCC-CchHHHHHHHHH-HHH
Q 025140 83 SFL-EAPVSGSKK---PA--E-----DGQL-IFLAAGDK--SLYNTVAPLLDIMGKSRFYLGD-VGNGAAMKLVVN-MIM 146 (257)
Q Consensus 83 ~~v-dapV~g~~~---~a--~-----~g~l-~i~~gg~~--~~~~~~~~ll~~~~~~~~~~G~-~G~a~~~Kl~~n-~~~ 146 (257)
.++ =+|-.-+.. .- . .|-- .+-+..|. +.++.+..++..+|... .+.. .-.=.-.++..- ..+
T Consensus 174 ~VVrVmPNtPg~~VR~~y~~G~~~~g~Gv~~liAv~qd~tgea~e~alala~aiG~~~-vieTtf~eE~e~DLfgeqtvL 252 (525)
T 3fr7_A 174 SVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATDVALGWSVALGSPF-TFATTLEQEYKSDIFGERGIL 252 (525)
T ss_dssp EEEEEEESSCHHHHHHHHHHHTTSTTCSCCEEEEEEECSSSCHHHHHHHHHHHTTCSE-EEECCHHHHHHHHHHHHHTTT
T ss_pred cEEEEecCCCchhHHHHHhcccccccCCccEEEEcCCCCCHHHHHHHHHHHHHCCCCe-eeeeeeeeehhHhhhhhHhhh
Confidence 443 445443332 01 1 3443 23333333 67899999999999853 2211 111111122211 112
Q ss_pred HHHHHHHHHHH-HHHHHcCCCHHHHHHH
Q 025140 147 GSMMATFSEGL-LHSEKVGLDPNVLVEV 173 (257)
Q Consensus 147 ~~~~~~~~Ea~-~la~~~Gld~~~~~~~ 173 (257)
.+...++.|++ ..+.+.|++++..+..
T Consensus 253 sG~~pAlieA~~d~lVe~G~~pe~Ay~~ 280 (525)
T 3fr7_A 253 LGAVHGIVEALFRRYTEQGMDEEMAYKN 280 (525)
T ss_dssp THHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 22222233333 4556789988764433
No 133
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=96.23 E-value=0.0017 Score=54.73 Aligned_cols=67 Identities=12% Similarity=-0.070 Sum_probs=48.2
Q ss_pred CccccCCHHHHHhcCCEEEEecCChHH--HHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEe
Q 025140 12 RCRYQPSPDEVAASCDVTFAMLADPES--AMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEA 87 (257)
Q Consensus 12 Ga~~~~s~~ea~~~advvi~~l~~~~~--v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vda 87 (257)
|.. .+++.++ +++|+||+|+|.+.. +..++ . .+.+.+|++++|+++.+.++ ++.+.++++|++++++
T Consensus 160 ~~~-~~~~~~~-~~~Divi~~tp~~~~~~~~~~l---~--~~~l~~g~~viD~~~~p~~t--~l~~~a~~~g~~~v~g 228 (263)
T 2d5c_A 160 GLR-AVPLEKA-REARLLVNATRVGLEDPSASPL---P--AELFPEEGAAVDLVYRPLWT--RFLREAKAKGLKVQTG 228 (263)
T ss_dssp TCE-ECCGGGG-GGCSEEEECSSTTTTCTTCCSS---C--GGGSCSSSEEEESCCSSSSC--HHHHHHHHTTCEEECS
T ss_pred ccc-hhhHhhc-cCCCEEEEccCCCCCCCCCCCC---C--HHHcCCCCEEEEeecCCccc--HHHHHHHHCcCEEECc
Confidence 544 5678888 999999999998631 11222 1 24567899999999874444 4778888889988755
No 134
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=96.14 E-value=0.024 Score=49.15 Aligned_cols=148 Identities=14% Similarity=0.035 Sum_probs=96.0
Q ss_pred cccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEE-EcCCCCHHHHHHHHHHHHHcCCcEEEecCCCC
Q 025140 14 RYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYV-DVSTVDGDTSKLINGHIKATGASFLEAPVSGS 92 (257)
Q Consensus 14 ~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~iv-d~ST~~p~~~~~la~~~~~~G~~~vdapV~g~ 92 (257)
+.+.+..|++++||+||=++|-.-+++.-+| ..+-+...++.++- |+|+++++ +|++.+... -+++-.=-+-.
T Consensus 76 ~~~~~l~~a~~~ad~ViEav~E~l~iK~~lf--~~l~~~~~~~aIlaSNTSsl~is---~ia~~~~~p-~r~ig~HffNP 149 (319)
T 3ado_A 76 SSCTNLAEAVEGVVHIQECVPENLDLKRKIF--AQLDSIVDDRVVLSSSSSCLLPS---KLFTGLAHV-KQCIVAHPVNP 149 (319)
T ss_dssp EEECCHHHHTTTEEEEEECCCSCHHHHHHHH--HHHHTTCCSSSEEEECCSSCCHH---HHHTTCTTG-GGEEEEEECSS
T ss_pred ccccchHhHhccCcEEeeccccHHHHHHHHH--HHHHHHhhhcceeehhhhhccch---hhhhhccCC-CcEEEecCCCC
Confidence 4678999999999999999999988876555 34444455555553 33445554 344333221 12322211222
Q ss_pred hHHhhcCceEEEecC---ChhHHHHHHHHHHHhcCCceec-CC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Q 025140 93 KKPAEDGQLIFLAAG---DKSLYNTVAPLLDIMGKSRFYL-GD-VGNGAAMKLVVNMIMGSMMATFSEGLLHSEKVGLDP 167 (257)
Q Consensus 93 ~~~a~~g~l~i~~gg---~~~~~~~~~~ll~~~~~~~~~~-G~-~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gld~ 167 (257)
|.-. .|+=++.| ++++++++..+++.++++++++ .+ +| .+.|=+ ....+.|++.+.+.-+.++
T Consensus 150 ~~~m---~LVEiv~g~~Ts~~~~~~~~~~~~~~gk~pv~v~kd~pG------Fi~NRl---~~~~~~EA~~lv~eGvas~ 217 (319)
T 3ado_A 150 PYYI---PLVELVPHPETSPATVDRTHALMRKIGQSPVRVLKEIDG------FVLNRL---QYAIISEAWRLVEEGIVSP 217 (319)
T ss_dssp TTTC---CEEEEEECTTCCHHHHHHHHHHHHHTTCEEEECSSCCTT------TTHHHH---HHHHHHHHHHHHHTTSSCH
T ss_pred cccc---chHHhcCCCCCcHHHHHHHHHHHHHhCCccCCcCCCCCC------EeHHHH---HHHHHHHHHHHHHhCCCCH
Confidence 2211 34434433 6689999999999999887654 55 66 233433 3567899999999999999
Q ss_pred HHHHHHHhhcCC
Q 025140 168 NVLVEVVSQGAI 179 (257)
Q Consensus 168 ~~~~~~l~~~~~ 179 (257)
+++-.++..+.+
T Consensus 218 edID~~~~~g~g 229 (319)
T 3ado_A 218 SDLDLVMSDGLG 229 (319)
T ss_dssp HHHHHHHHTTHH
T ss_pred HHHHHHHHhCCC
Confidence 999888877643
No 135
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=96.08 E-value=0.0024 Score=48.68 Aligned_cols=67 Identities=12% Similarity=0.068 Sum_probs=50.9
Q ss_pred cCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEE
Q 025140 11 SRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE 86 (257)
Q Consensus 11 ~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vd 86 (257)
.|.....|+.|+....|++++|+|. +.+.+++ +++.+.. .+.+|+..++. .+++.+.++++|++++-
T Consensus 56 ~G~~~~~sl~el~~~vDlavi~vp~-~~~~~v~---~~~~~~g-i~~i~~~~g~~----~~~~~~~a~~~Gir~vg 122 (140)
T 1iuk_A 56 FGEEAVASLLDLKEPVDILDVFRPP-SALMDHL---PEVLALR-PGLVWLQSGIR----HPEFEKALKEAGIPVVA 122 (140)
T ss_dssp TTEECBSSGGGCCSCCSEEEECSCH-HHHTTTH---HHHHHHC-CSCEEECTTCC----CHHHHHHHHHTTCCEEE
T ss_pred CCEEecCCHHHCCCCCCEEEEEeCH-HHHHHHH---HHHHHcC-CCEEEEcCCcC----HHHHHHHHHHcCCEEEc
Confidence 4888889999999999999999997 6666666 3444332 34677776665 37888889999999883
No 136
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=96.07 E-value=0.0019 Score=54.81 Aligned_cols=67 Identities=16% Similarity=0.140 Sum_probs=48.2
Q ss_pred CccccCCHHHHHhcCCEEEEecCChHH--HHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEe
Q 025140 12 RCRYQPSPDEVAASCDVTFAMLADPES--AMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEA 87 (257)
Q Consensus 12 Ga~~~~s~~ea~~~advvi~~l~~~~~--v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vda 87 (257)
|....+++.++++++|+||+|+|.... +..++ + .+.+.++++++|+++ . ..++.+.++++|++++++
T Consensus 173 g~~~~~~~~~~~~~aDiVi~atp~~~~~~~~~~i---~--~~~l~~g~~viDv~~-~---~t~ll~~a~~~g~~~v~g 241 (275)
T 2hk9_A 173 PLEVVNSPEEVIDKVQVIVNTTSVGLKDEDPEIF---N--YDLIKKDHVVVDIIY-K---ETKLLKKAKEKGAKLLDG 241 (275)
T ss_dssp CEEECSCGGGTGGGCSEEEECSSTTSSTTCCCSS---C--GGGCCTTSEEEESSS-S---CCHHHHHHHHTTCEEECS
T ss_pred CCeeehhHHhhhcCCCEEEEeCCCCCCCCCCCCC---C--HHHcCCCCEEEEcCC-C---hHHHHHHHHHCcCEEECC
Confidence 667777889999999999999998642 11111 1 234678999999999 2 234566777789888865
No 137
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=96.02 E-value=0.074 Score=48.75 Aligned_cols=117 Identities=12% Similarity=0.149 Sum_probs=84.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHhhcC-CCchhhhccccccccC-C-----CCCCC
Q 025140 134 NGAAMKLVVNMIMGSMMATFSEGLLHSEK------VGLDPNVLVEVVSQGA-ISAPMYSLKGPSMIES-L-----YPTAF 200 (257)
Q Consensus 134 ~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~------~Gld~~~~~~~l~~~~-~~s~~~~~~~~~~~~~-~-----~~~~f 200 (257)
..+.+|.+.|.+.++.+.+.+|.+.+.++ .++|...+..+.+.+. ..|++++...+.+.+. + ++|.|
T Consensus 317 ~~~~~~~~~~al~~~~i~~yaqGf~ll~~as~~~~w~l~~~~ia~iwr~GciIrs~~l~~i~~a~~~~~~l~~ll~~~~f 396 (484)
T 4gwg_A 317 KKSFLEDIRKALYASKIISYAQGFMLLRQAATEFGWTLNYGGIALMWRGGCIIRSVFLGKIKDAFDRNPELQNLLLDDFF 396 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHTSTTCTTCBHHHHHHHHHHHHCTTCSCGGGSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHccCceeHHHHHHHHHHHHHhCCCchhhhcCHHH
Confidence 46789999999999999999999987664 4599999999998876 5889888654332211 1 11223
Q ss_pred c--hhhHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHCCCCCcchHHHHHHHH
Q 025140 201 P--LKHQQKDLRLALGLAESVSQSTPIAAAANELYKVAKSHGLSDEDFSAVIEALK 254 (257)
Q Consensus 201 ~--~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g~g~~d~~a~~~~~~ 254 (257)
. +.......+.++..+-+.|+|+|.+.+++..|+.-.. +.-.+.+++..|
T Consensus 397 ~~~~~~~~~~~r~vv~~a~~~gip~P~~s~al~y~~~~r~----~~lpanliqaqR 448 (484)
T 4gwg_A 397 KSAVENCQDSWRRAVSTGVQAGIPMPCFTTALSFYDGYRH----EMLPASLIQAQR 448 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTC----SCCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcc----CCCHHHHHHHHH
Confidence 2 3333456777899999999999999999999987733 333444555444
No 138
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=95.83 E-value=0.0051 Score=47.01 Aligned_cols=66 Identities=11% Similarity=0.086 Sum_probs=48.7
Q ss_pred cCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEE
Q 025140 11 SRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 11 ~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~v 85 (257)
.|.....|+.|+....|++++++|+ +.+.+++ +.+.+.. .+.+|+..++. .+++.+.++++|++++
T Consensus 63 ~G~~~y~sl~~l~~~vDlvvi~vp~-~~~~~vv---~~~~~~g-i~~i~~~~g~~----~~~l~~~a~~~Gi~vv 128 (144)
T 2d59_A 63 LGRKCYPSVLDIPDKIEVVDLFVKP-KLTMEYV---EQAIKKG-AKVVWFQYNTY----NREASKKADEAGLIIV 128 (144)
T ss_dssp TTEECBSSGGGCSSCCSEEEECSCH-HHHHHHH---HHHHHHT-CSEEEECTTCC----CHHHHHHHHHTTCEEE
T ss_pred CCeeccCCHHHcCCCCCEEEEEeCH-HHHHHHH---HHHHHcC-CCEEEECCCch----HHHHHHHHHHcCCEEE
Confidence 4788889999999999999999997 5556666 3444322 23566655443 5788889999999987
No 139
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=95.76 E-value=0.022 Score=49.36 Aligned_cols=70 Identities=13% Similarity=0.140 Sum_probs=55.7
Q ss_pred CccccCCHHHHHh--cCCEEEEecCChHHHHHHhcCCCcccccCCCCC-EEEEc-CCCCHHHHHHHHHHHHHcCCcEEEe
Q 025140 12 RCRYQPSPDEVAA--SCDVTFAMLADPESAMDVACGKHGAASGMGPGK-GYVDV-STVDGDTSKLINGHIKATGASFLEA 87 (257)
Q Consensus 12 Ga~~~~s~~ea~~--~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~-~ivd~-ST~~p~~~~~la~~~~~~G~~~vda 87 (257)
|.+..+|..|+++ +.|+|++|+|++...+.+. ..+..|+ ++++. .+.++++++++.+.++++|+.+.-+
T Consensus 51 ~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~-------~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~ 123 (336)
T 2p2s_A 51 SVPFAASAEQLITDASIDLIACAVIPCDRAELAL-------RTLDAGKDFFTAKPPLTTLEQLDAVQRRVAETGRKFAVY 123 (336)
T ss_dssp TCCBCSCHHHHHTCTTCCEEEECSCGGGHHHHHH-------HHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHCCCEEEC
T ss_pred CCcccCCHHHHhhCCCCCEEEEeCChhhHHHHHH-------HHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 6788899999997 5899999999988766554 2234565 78886 6889999999999999998877544
Q ss_pred c
Q 025140 88 P 88 (257)
Q Consensus 88 p 88 (257)
-
T Consensus 124 ~ 124 (336)
T 2p2s_A 124 F 124 (336)
T ss_dssp C
T ss_pred e
Confidence 3
No 140
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=95.75 E-value=0.0023 Score=55.52 Aligned_cols=65 Identities=14% Similarity=0.200 Sum_probs=50.1
Q ss_pred Cc--cccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcC-CcEEE
Q 025140 12 RC--RYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATG-ASFLE 86 (257)
Q Consensus 12 Ga--~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G-~~~vd 86 (257)
|. +.+ ++.|+++++|+||+|.|... .++. .+.+.+|+.|+++++..|+. +++...+-.++ ..|+|
T Consensus 169 g~~~~~~-~~~eav~~aDIVi~aT~s~~---pvl~-----~~~l~~G~~V~~vGs~~p~~-~El~~~~~~~a~~v~vD 236 (313)
T 3hdj_A 169 GVPARMA-APADIAAQADIVVTATRSTT---PLFA-----GQALRAGAFVGAIGSSLPHT-RELDDEALRRARAVVVE 236 (313)
T ss_dssp TSCEEEC-CHHHHHHHCSEEEECCCCSS---CSSC-----GGGCCTTCEEEECCCSSTTC-CCCCHHHHHHCSEEEES
T ss_pred CCeEEEe-CHHHHHhhCCEEEEccCCCC---cccC-----HHHcCCCcEEEECCCCCCch-hhcCHHHHhcCCEEEEC
Confidence 65 456 99999999999999999853 2331 13478999999999999985 88877666665 46788
No 141
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=95.60 E-value=0.023 Score=48.78 Aligned_cols=73 Identities=16% Similarity=0.140 Sum_probs=55.2
Q ss_pred ccccCCHHHHHh--cCCEEEEecCChHHHHHHhcCCCcccccCCCCC-EEEEc-CCCCHHHHHHHHHHHHHcCCcEEEec
Q 025140 13 CRYQPSPDEVAA--SCDVTFAMLADPESAMDVACGKHGAASGMGPGK-GYVDV-STVDGDTSKLINGHIKATGASFLEAP 88 (257)
Q Consensus 13 a~~~~s~~ea~~--~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~-~ivd~-ST~~p~~~~~la~~~~~~G~~~vdap 88 (257)
....++..|+++ ++|+|++|+|+....+-+. . .+..|+ ++++. .+.+++.++++.+.++++|+.+..+.
T Consensus 55 ~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~----~---al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~~~ 127 (315)
T 3c1a_A 55 CVIESDWRSVVSAPEVEAVIIATPPATHAEITL----A---AIASGKAVLVEKPLTLDLAEAEAVAAAAKATGVMVWVEH 127 (315)
T ss_dssp CEEESSTHHHHTCTTCCEEEEESCGGGHHHHHH----H---HHHTTCEEEEESSSCSCHHHHHHHHHHHHHHCCCEEEEC
T ss_pred CcccCCHHHHhhCCCCCEEEEeCChHHHHHHHH----H---HHHCCCcEEEcCCCcCCHHHHHHHHHHHHHcCCEEEEee
Confidence 556789999996 7999999999987665443 2 233555 77774 67899999999999999998877665
Q ss_pred CCCC
Q 025140 89 VSGS 92 (257)
Q Consensus 89 V~g~ 92 (257)
....
T Consensus 128 ~~r~ 131 (315)
T 3c1a_A 128 TQLF 131 (315)
T ss_dssp GGGG
T ss_pred chhc
Confidence 5443
No 142
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=95.51 E-value=0.042 Score=47.21 Aligned_cols=73 Identities=18% Similarity=0.145 Sum_probs=55.8
Q ss_pred CccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCC-EEEEc-CCCCHHHHHHHHHHHHHcCCcEEEecC
Q 025140 12 RCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGK-GYVDV-STVDGDTSKLINGHIKATGASFLEAPV 89 (257)
Q Consensus 12 Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~-~ivd~-ST~~p~~~~~la~~~~~~G~~~vdapV 89 (257)
|....++..++..++|+|++|+|+....+.+. .+ +..|+ ++++. .+.+++.++++.+.+++.|+.+..+-.
T Consensus 52 g~~~~~~~~~l~~~~D~V~i~tp~~~h~~~~~----~a---l~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~~~~ 124 (319)
T 1tlt_A 52 RIPYADSLSSLAASCDAVFVHSSTASHFDVVS----TL---LNAGVHVCVDKPLAENLRDAERLVELAARKKLTLMVGFN 124 (319)
T ss_dssp TCCBCSSHHHHHTTCSEEEECSCTTHHHHHHH----HH---HHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEECG
T ss_pred CCCccCcHHHhhcCCCEEEEeCCchhHHHHHH----HH---HHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEeee
Confidence 76678888887678999999999987765554 22 33555 77775 678899999999999999988876654
Q ss_pred CC
Q 025140 90 SG 91 (257)
Q Consensus 90 ~g 91 (257)
..
T Consensus 125 ~r 126 (319)
T 1tlt_A 125 RR 126 (319)
T ss_dssp GG
T ss_pred cc
Confidence 43
No 143
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=95.20 E-value=0.038 Score=47.63 Aligned_cols=76 Identities=9% Similarity=0.080 Sum_probs=57.8
Q ss_pred Cc-cccCCHHHHHh--cCCEEEEecCChHHHHHHhcCCCcccccCCCCC-EEEEc-CCCCHHHHHHHHHHHHHcCCcEEE
Q 025140 12 RC-RYQPSPDEVAA--SCDVTFAMLADPESAMDVACGKHGAASGMGPGK-GYVDV-STVDGDTSKLINGHIKATGASFLE 86 (257)
Q Consensus 12 Ga-~~~~s~~ea~~--~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~-~ivd~-ST~~p~~~~~la~~~~~~G~~~vd 86 (257)
|. +..+|..|+++ ++|+|++|+|+....+-+. .+ +..|+ ++++. .+.++++++++.+.++++|+.+..
T Consensus 46 g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~----~a---l~~Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~~~~~ 118 (332)
T 2glx_A 46 GIGKSVTSVEELVGDPDVDAVYVSTTNELHREQTL----AA---IRAGKHVLCEKPLAMTLEDAREMVVAAREAGVVLGT 118 (332)
T ss_dssp TCSCCBSCHHHHHTCTTCCEEEECSCGGGHHHHHH----HH---HHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred CCCcccCCHHHHhcCCCCCEEEEeCChhHhHHHHH----HH---HHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 66 37789999997 4999999999877655443 22 33565 66775 578999999999999999998888
Q ss_pred ecCCCChH
Q 025140 87 APVSGSKK 94 (257)
Q Consensus 87 apV~g~~~ 94 (257)
+.....-+
T Consensus 119 ~~~~r~~p 126 (332)
T 2glx_A 119 NHHLRNAA 126 (332)
T ss_dssp CCCGGGSH
T ss_pred eehhhcCH
Confidence 77665533
No 144
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=95.10 E-value=0.044 Score=47.04 Aligned_cols=195 Identities=13% Similarity=0.012 Sum_probs=96.8
Q ss_pred HHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEecCCC-----ChH-
Q 025140 21 EVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSG-----SKK- 94 (257)
Q Consensus 21 ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vdapV~g-----~~~- 94 (257)
++...+|+||+|++.. ++++++ +.+.. +.+++ ||.+...-... ..+.+.+. .-+++-+-+.- +|.
T Consensus 63 ~~~~~~D~vilavK~~-~~~~~l---~~l~~-~~~~~-ivs~~nGi~~~-e~l~~~~~--~~~vl~g~~~~~a~~~~pg~ 133 (307)
T 3ego_A 63 SINSDFDLLVVTVKQH-QLQSVF---SSLER-IGKTN-ILFLQNGMGHI-HDLKDWHV--GHSIYVGIVEHGAVRKSDTA 133 (307)
T ss_dssp SCCSCCSEEEECCCGG-GHHHHH---HHTTS-SCCCE-EEECCSSSHHH-HHHHTCCC--SCEEEEEEECCEEEECSSSE
T ss_pred cccCCCCEEEEEeCHH-HHHHHH---HHhhc-CCCCe-EEEecCCccHH-HHHHHhCC--CCcEEEEEEeeceEECCCCE
Confidence 4567899999999964 466676 34432 33444 66655443321 22322221 12333332221 111
Q ss_pred --HhhcCceEEEec---CChhHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHHHHHH---------------------
Q 025140 95 --PAEDGQLIFLAA---GDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGS--------------------- 148 (257)
Q Consensus 95 --~a~~g~l~i~~g---g~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~~~~--------------------- 148 (257)
....|. +.+| |+.+.++++...|+.-+-++.+..++-...--|++.|.....
T Consensus 134 v~~~~~g~--~~iG~~~~~~~~~~~l~~~l~~ag~~~~~~~di~~~~W~Kl~~N~~~N~ltal~~~~~g~l~~~~~~~~l 211 (307)
T 3ego_A 134 VDHTGLGA--IKWSAFDDAEPDRLNILFQHNHSDFPIYYETDWYRLLTGKLIVNACINPLTALLQVKNGELLTTPAYLAF 211 (307)
T ss_dssp EEEEECCC--EEEEECTTCCGGGGTTTTSSCCTTSCEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHSHHHHHH
T ss_pred EEEeeeee--EEEEeCCCCcHHHHHHHHHhhhCCCCcEechhHHHHHHHHHHHhhhhhHHHHHhcCCcchhhcChhHHHH
Confidence 112232 3444 222222233333333233455555677888899988874322
Q ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHh----hcC-CCchhhhccccccccCCCCCCCchhhHHHHHHHHHHHHHhcCCCc
Q 025140 149 MMATFSEGLLHSEKVGLDPNVLVEVVS----QGA-ISAPMYSLKGPSMIESLYPTAFPLKHQQKDLRLALGLAESVSQST 223 (257)
Q Consensus 149 ~~~~~~Ea~~la~~~Gld~~~~~~~l~----~~~-~~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~g~~~ 223 (257)
....+.|+..+++.. +++.+++-+. ... ..|.+++. +..|.. .-++.+ ...+++.++++|+++
T Consensus 212 ~~~l~~E~~~va~~~--~~~~~~~~~~~~~~~~~~~~sSM~qD----~~~gr~---tEid~i---~G~vv~~a~~~gv~t 279 (307)
T 3ego_A 212 MKLVFQEACRILKLE--NEEKAWERVQAVCGQTKENRSSMLVD----VIGGRQ---TEADAI---IGYLLKEASLQGLDA 279 (307)
T ss_dssp HHHHHHHHHHHHTCS--CHHHHHHHHHHHHHHTTTCCCHHHHH----HHHTCC---CSHHHH---HHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHhcc--ChHHHHHHHHHHHHhcCCCCchHHHH----HHcCCc---ccHHHh---hhHHHHHHHHcCCCC
Confidence 234566777776644 2333333221 111 12222221 111111 112222 345689999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 025140 224 PIAAAANELYKVAKS 238 (257)
Q Consensus 224 p~~~~~~~~~~~a~~ 238 (257)
|..+.+.+..+...+
T Consensus 280 P~~~~l~~li~~~e~ 294 (307)
T 3ego_A 280 VHLEFLYGSIKALER 294 (307)
T ss_dssp HHHHHHHHHHHHTC-
T ss_pred cHHHHHHHHHHHHHh
Confidence 999999988775533
No 145
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=95.01 E-value=0.073 Score=45.78 Aligned_cols=75 Identities=8% Similarity=0.036 Sum_probs=58.2
Q ss_pred Cc-cccCCHHHHH-hcCCEEEEecCChHHHHHHhcCCCcccccCCCCC-EEEEc-CCCCHHHHHHHHHHHHHcCCcEEEe
Q 025140 12 RC-RYQPSPDEVA-ASCDVTFAMLADPESAMDVACGKHGAASGMGPGK-GYVDV-STVDGDTSKLINGHIKATGASFLEA 87 (257)
Q Consensus 12 Ga-~~~~s~~ea~-~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~-~ivd~-ST~~p~~~~~la~~~~~~G~~~vda 87 (257)
|. ...++..|++ .++|+|++|+|+.....-+. . .+..|+ ++++. .+.+++.++++.+.++++|+.+..+
T Consensus 47 ~~~~~~~~~~~~l~~~~D~V~i~tp~~~h~~~~~----~---al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~~~~~ 119 (325)
T 2ho3_A 47 QNIQLFDQLEVFFKSSFDLVYIASPNSLHFAQAK----A---ALSAGKHVILEKPAVSQPQEWFDLIQTAEKNNCFIFEA 119 (325)
T ss_dssp SSCEEESCHHHHHTSSCSEEEECSCGGGHHHHHH----H---HHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEeCCHHHHhCCCCCEEEEeCChHHHHHHHH----H---HHHcCCcEEEecCCcCCHHHHHHHHHHHHHcCCEEEEE
Confidence 53 6788999999 78999999999877655443 1 233455 77786 5789999999999999999988887
Q ss_pred cCCCCh
Q 025140 88 PVSGSK 93 (257)
Q Consensus 88 pV~g~~ 93 (257)
.....-
T Consensus 120 ~~~r~~ 125 (325)
T 2ho3_A 120 ARNYHE 125 (325)
T ss_dssp CTTTTC
T ss_pred EhhhcC
Confidence 766553
No 146
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=95.00 E-value=0.0038 Score=54.26 Aligned_cols=65 Identities=12% Similarity=0.148 Sum_probs=50.9
Q ss_pred ccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEec
Q 025140 13 CRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAP 88 (257)
Q Consensus 13 a~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vdap 88 (257)
.. ++++.|++ ++|+||+|.|+.. .++. .+.+.+|+.|+++++..|. .+++...+..++..|+|.+
T Consensus 177 ~~-~~~~~e~v-~aDvVi~aTp~~~---pv~~-----~~~l~~G~~V~~ig~~~p~-~~el~~~~~~~a~v~vD~~ 241 (322)
T 1omo_A 177 AS-VQPAEEAS-RCDVLVTTTPSRK---PVVK-----AEWVEEGTHINAIGADGPG-KQELDVEILKKAKIVVDDL 241 (322)
T ss_dssp EE-ECCHHHHT-SSSEEEECCCCSS---CCBC-----GGGCCTTCEEEECSCCSTT-CCCBCHHHHHTEEEEESCH
T ss_pred EE-ECCHHHHh-CCCEEEEeeCCCC---ceec-----HHHcCCCeEEEECCCCCCC-ccccCHHHHhcCeEEECCH
Confidence 45 78999999 9999999999854 2321 1356799999999999998 6788777767777889964
No 147
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=94.87 E-value=0.058 Score=46.63 Aligned_cols=74 Identities=14% Similarity=0.099 Sum_probs=57.7
Q ss_pred Cc-cccCCHHHHHh--cCCEEEEecCChHHHHHHhcCCCcccccCCCC-CEEEEcC-CCCHHHHHHHHHHHHHcCCcEEE
Q 025140 12 RC-RYQPSPDEVAA--SCDVTFAMLADPESAMDVACGKHGAASGMGPG-KGYVDVS-TVDGDTSKLINGHIKATGASFLE 86 (257)
Q Consensus 12 Ga-~~~~s~~ea~~--~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g-~~ivd~S-T~~p~~~~~la~~~~~~G~~~vd 86 (257)
|. +..+|..|+++ ++|+|++|+|+....+-+. .+ +..| .++++.. +.+++.++++.+.++++|+.+..
T Consensus 51 ~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~----~a---l~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v 123 (330)
T 3e9m_A 51 AIPVAYGSYEELCKDETIDIIYIPTYNQGHYSAAK----LA---LSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVFLME 123 (330)
T ss_dssp TCCCCBSSHHHHHHCTTCSEEEECCCGGGHHHHHH----HH---HHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCceeCCHHHHhcCCCCCEEEEcCCCHHHHHHHH----HH---HHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 66 57899999998 7999999999988766554 22 2234 4888876 88999999999999999988766
Q ss_pred ecCCCC
Q 025140 87 APVSGS 92 (257)
Q Consensus 87 apV~g~ 92 (257)
+.....
T Consensus 124 ~~~~r~ 129 (330)
T 3e9m_A 124 AQKSVF 129 (330)
T ss_dssp CCSGGG
T ss_pred EEhhhh
Confidence 655433
No 148
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=94.71 E-value=0.058 Score=46.73 Aligned_cols=74 Identities=14% Similarity=0.091 Sum_probs=55.2
Q ss_pred Cc-cccCCHHHHHh--cCCEEEEecCChHHHHHHhcCCCcccccCCCCC-EEEEc-CCCCHHHHHHHHHHHHHc-CCcEE
Q 025140 12 RC-RYQPSPDEVAA--SCDVTFAMLADPESAMDVACGKHGAASGMGPGK-GYVDV-STVDGDTSKLINGHIKAT-GASFL 85 (257)
Q Consensus 12 Ga-~~~~s~~ea~~--~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~-~ivd~-ST~~p~~~~~la~~~~~~-G~~~v 85 (257)
|. ...++..|+++ ++|+|++|+|+....+.+. .+ +..|+ ++++. .+.+++.++++.+.++++ |+.+.
T Consensus 55 g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~----~a---l~~G~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~~~ 127 (346)
T 3cea_A 55 GVETTYTNYKDMIDTENIDAIFIVAPTPFHPEMTI----YA---MNAGLNVFCEKPLGLDFNEVDEMAKVIKSHPNQIFQ 127 (346)
T ss_dssp CCSEEESCHHHHHTTSCCSEEEECSCGGGHHHHHH----HH---HHTTCEEEECSCCCSCHHHHHHHHHHHHTCTTSCEE
T ss_pred CCCcccCCHHHHhcCCCCCEEEEeCChHhHHHHHH----HH---HHCCCEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEE
Confidence 76 67899999997 6999999999987766554 22 33465 66664 567899999999999888 88776
Q ss_pred EecCCCC
Q 025140 86 EAPVSGS 92 (257)
Q Consensus 86 dapV~g~ 92 (257)
.+.....
T Consensus 128 ~~~~~r~ 134 (346)
T 3cea_A 128 SGFMRRY 134 (346)
T ss_dssp CCCGGGT
T ss_pred Eeccccc
Confidence 6554433
No 149
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=94.70 E-value=0.075 Score=45.33 Aligned_cols=71 Identities=14% Similarity=0.061 Sum_probs=55.1
Q ss_pred cCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCC-EEEE-cCCCCHHHHHHHHHHHHHcCCcEEEec
Q 025140 11 SRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGK-GYVD-VSTVDGDTSKLINGHIKATGASFLEAP 88 (257)
Q Consensus 11 ~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~-~ivd-~ST~~p~~~~~la~~~~~~G~~~vdap 88 (257)
.|....+|..|++++.|+|++|+|+....+-+. .+ +..|+ ++++ -.+.+++.++++.+.++++|+.+.-+-
T Consensus 52 ~~~~~~~~~~~ll~~~D~V~i~tp~~~h~~~~~----~a---l~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~ 124 (308)
T 3uuw_A 52 YRIMPFDSIESLAKKCDCIFLHSSTETHYEIIK----IL---LNLGVHVYVDKPLASTVSQGEELIELSTKKNLNLMVGF 124 (308)
T ss_dssp HTCCBCSCHHHHHTTCSEEEECCCGGGHHHHHH----HH---HHTTCEEEECSSSSSSHHHHHHHHHHHHHHTCCEEECC
T ss_pred cCCCCcCCHHHHHhcCCEEEEeCCcHhHHHHHH----HH---HHCCCcEEEcCCCCCCHHHHHHHHHHHHHcCCEEEEee
Confidence 377778999999999999999999988766554 22 23343 6666 468899999999999999988765443
No 150
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=94.60 E-value=0.071 Score=45.99 Aligned_cols=72 Identities=13% Similarity=0.118 Sum_probs=55.6
Q ss_pred cCccccCCHHHHHh--cCCEEEEecCChHHHHHHhcCCCcccccCCCC-CEEEEcC-CCCHHHHHHHHHHHHHcCCcEEE
Q 025140 11 SRCRYQPSPDEVAA--SCDVTFAMLADPESAMDVACGKHGAASGMGPG-KGYVDVS-TVDGDTSKLINGHIKATGASFLE 86 (257)
Q Consensus 11 ~Ga~~~~s~~ea~~--~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g-~~ivd~S-T~~p~~~~~la~~~~~~G~~~vd 86 (257)
.|.. .+|..|+++ +.|+|++|+|+....+.+. .+ +..| .++++.- +.++++++++.+.++++|+.+.-
T Consensus 48 ~~~~-~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~----~a---l~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v 119 (331)
T 4hkt_A 48 YGCE-VRTIDAIEAAADIDAVVICTPTDTHADLIE----RF---ARAGKAIFCEKPIDLDAERVRACLKVVSDTKAKLMV 119 (331)
T ss_dssp TTCE-ECCHHHHHHCTTCCEEEECSCGGGHHHHHH----HH---HHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred hCCC-cCCHHHHhcCCCCCEEEEeCCchhHHHHHH----HH---HHcCCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 3777 899999998 7999999999988776554 22 2234 4677765 89999999999999999987765
Q ss_pred ecCC
Q 025140 87 APVS 90 (257)
Q Consensus 87 apV~ 90 (257)
+...
T Consensus 120 ~~~~ 123 (331)
T 4hkt_A 120 GFNR 123 (331)
T ss_dssp CCGG
T ss_pred cccc
Confidence 5443
No 151
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=94.60 E-value=0.078 Score=46.21 Aligned_cols=73 Identities=21% Similarity=0.303 Sum_probs=56.5
Q ss_pred cCccccCCHHHHH--hcCCEEEEecCChHHHHHHhcCCCcccccCCCC-CEEEEcC-CCCHHHHHHHHHHHHHcCCcEEE
Q 025140 11 SRCRYQPSPDEVA--ASCDVTFAMLADPESAMDVACGKHGAASGMGPG-KGYVDVS-TVDGDTSKLINGHIKATGASFLE 86 (257)
Q Consensus 11 ~Ga~~~~s~~ea~--~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g-~~ivd~S-T~~p~~~~~la~~~~~~G~~~vd 86 (257)
.|+...+|..|++ .+.|+|++|+|+....+.+. .+ +..| .++++.- +.+++.++++.+.++++|+.+.-
T Consensus 50 ~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~----~a---l~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v 122 (354)
T 3db2_A 50 YNCAGDATMEALLAREDVEMVIITVPNDKHAEVIE----QC---ARSGKHIYVEKPISVSLDHAQRIDQVIKETGVKFLC 122 (354)
T ss_dssp HTCCCCSSHHHHHHCSSCCEEEECSCTTSHHHHHH----HH---HHTTCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEE
T ss_pred cCCCCcCCHHHHhcCCCCCEEEEeCChHHHHHHHH----HH---HHcCCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 3888899999999 45899999999987766554 22 2334 4777775 89999999999999999987765
Q ss_pred ecCC
Q 025140 87 APVS 90 (257)
Q Consensus 87 apV~ 90 (257)
+...
T Consensus 123 ~~~~ 126 (354)
T 3db2_A 123 GHSS 126 (354)
T ss_dssp ECGG
T ss_pred eech
Confidence 5443
No 152
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=94.41 E-value=0.08 Score=45.91 Aligned_cols=73 Identities=14% Similarity=0.039 Sum_probs=56.5
Q ss_pred cCccccCCHHHHHh--cCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEe
Q 025140 11 SRCRYQPSPDEVAA--SCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVS-TVDGDTSKLINGHIKATGASFLEA 87 (257)
Q Consensus 11 ~Ga~~~~s~~ea~~--~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~S-T~~p~~~~~la~~~~~~G~~~vda 87 (257)
.|....+|..|+++ +.|+|++|+|+....+-+. .+++. ...++++.. +.+++.++++.+.++++|+.+.-+
T Consensus 49 ~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~----~al~~--gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~ 122 (344)
T 3euw_A 49 NGAEAVASPDEVFARDDIDGIVIGSPTSTHVDLIT----RAVER--GIPALCEKPIDLDIEMVRACKEKIGDGASKVMLG 122 (344)
T ss_dssp TTCEEESSHHHHTTCSCCCEEEECSCGGGHHHHHH----HHHHT--TCCEEECSCSCSCHHHHHHHHHHHGGGGGGEEEC
T ss_pred cCCceeCCHHHHhcCCCCCEEEEeCCchhhHHHHH----HHHHc--CCcEEEECCCCCCHHHHHHHHHHHHhcCCeEEec
Confidence 37888999999998 8999999999988776554 22221 235777776 889999999999999988876555
Q ss_pred cC
Q 025140 88 PV 89 (257)
Q Consensus 88 pV 89 (257)
..
T Consensus 123 ~~ 124 (344)
T 3euw_A 123 FN 124 (344)
T ss_dssp CG
T ss_pred ch
Confidence 43
No 153
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=94.41 E-value=0.16 Score=43.74 Aligned_cols=79 Identities=18% Similarity=0.126 Sum_probs=58.1
Q ss_pred hhhhc-Ccc-ccCCHHHHHh--cCCEEEEecCChHHHHHHhcCCCcccccCCCC-CEEEEcC-CCCHHHHHHHHHHHHHc
Q 025140 7 AFYYS-RCR-YQPSPDEVAA--SCDVTFAMLADPESAMDVACGKHGAASGMGPG-KGYVDVS-TVDGDTSKLINGHIKAT 80 (257)
Q Consensus 7 ~~~~~-Ga~-~~~s~~ea~~--~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g-~~ivd~S-T~~p~~~~~la~~~~~~ 80 (257)
.+.+. |.. ..+|..|+++ +.|+|++|+|+....+-+. .+ +..| .++++.- +.+++.++++.+.++++
T Consensus 45 ~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~----~a---l~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~ 117 (329)
T 3evn_A 45 AFANKYHLPKAYDKLEDMLADESIDVIYVATINQDHYKVAK----AA---LLAGKHVLVEKPFTLTYDQANELFALAESC 117 (329)
T ss_dssp C---CCCCSCEESCHHHHHTCTTCCEEEECSCGGGHHHHHH----HH---HHTTCEEEEESSCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHHHHHHH----HH---HHCCCeEEEccCCcCCHHHHHHHHHHHHHc
Confidence 34443 653 7899999998 7999999999987766554 22 2344 4777775 88999999999999999
Q ss_pred CCcEEEecCCCC
Q 025140 81 GASFLEAPVSGS 92 (257)
Q Consensus 81 G~~~vdapV~g~ 92 (257)
|+.+..+.....
T Consensus 118 ~~~~~v~~~~r~ 129 (329)
T 3evn_A 118 NLFLMEAQKSVF 129 (329)
T ss_dssp TCCEEEECSSCS
T ss_pred CCEEEEEEcccC
Confidence 988877766544
No 154
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=94.37 E-value=0.12 Score=45.31 Aligned_cols=73 Identities=15% Similarity=0.091 Sum_probs=56.3
Q ss_pred hhcCccccCCHHHHHh--cCCEEEEecCChHHHHHHhcCCCcccccCCCCC-EEEEc-CCCCHHHHHHHHHHHHHcCCcE
Q 025140 9 YYSRCRYQPSPDEVAA--SCDVTFAMLADPESAMDVACGKHGAASGMGPGK-GYVDV-STVDGDTSKLINGHIKATGASF 84 (257)
Q Consensus 9 ~~~Ga~~~~s~~ea~~--~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~-~ivd~-ST~~p~~~~~la~~~~~~G~~~ 84 (257)
...|+...+|..|+++ +.|+|++|+|+....+-+. .+ +..|+ ++++. -+.+++.++++.+.++++|+.+
T Consensus 47 ~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~----~a---l~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~ 119 (359)
T 3e18_A 47 AQKGLKIYESYEAVLADEKVDAVLIATPNDSHKELAI----SA---LEAGKHVVCEKPVTMTSEDLLAIMDVAKRVNKHF 119 (359)
T ss_dssp HTTTCCBCSCHHHHHHCTTCCEEEECSCGGGHHHHHH----HH---HHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCE
T ss_pred HhcCCceeCCHHHHhcCCCCCEEEEcCCcHHHHHHHH----HH---HHCCCCEEeeCCCcCCHHHHHHHHHHHHHhCCeE
Confidence 3468888999999998 7899999999988766554 22 33454 67776 3788999999999999998876
Q ss_pred EEec
Q 025140 85 LEAP 88 (257)
Q Consensus 85 vdap 88 (257)
.-+-
T Consensus 120 ~v~~ 123 (359)
T 3e18_A 120 MVHQ 123 (359)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 5443
No 155
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=94.31 E-value=0.0089 Score=52.90 Aligned_cols=62 Identities=11% Similarity=0.075 Sum_probs=47.0
Q ss_pred CCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEE
Q 025140 17 PSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE 86 (257)
Q Consensus 17 ~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vd 86 (257)
+++.++++++|+||.|+|..... .+. . ..+..|+.++|+|+.+++ .+++.+.++++|+.++.
T Consensus 69 ~~l~~ll~~~DvVIn~~P~~~~~-~v~---~---a~l~~G~~~vD~s~~~~~-~~~l~~~Ak~aG~~~l~ 130 (365)
T 2z2v_A 69 DKLVEVMKEFELVIGALPGFLGF-KSI---K---AAIKSKVDMVDVSFMPEN-PLELRDEAEKAQVTIVF 130 (365)
T ss_dssp HHHHHHHTTCSCEEECCCHHHHH-HHH---H---HHHHTTCCEEECCCCSSC-GGGGHHHHHHTTCEEEC
T ss_pred HHHHHHHhCCCEEEECCChhhhH-HHH---H---HHHHhCCeEEEccCCcHH-HHHHHHHHHHcCCEEEE
Confidence 56788899999999999876543 243 1 234578999999987554 57888889999998873
No 156
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=94.19 E-value=0.098 Score=45.37 Aligned_cols=72 Identities=7% Similarity=0.057 Sum_probs=55.4
Q ss_pred Cc-cccCCHHHHHh--cCCEEEEecCChHHHHHHhcCCCcccccCCCC-CEEEEcC-CCCHHHHHHHHHHHHHcCCcEEE
Q 025140 12 RC-RYQPSPDEVAA--SCDVTFAMLADPESAMDVACGKHGAASGMGPG-KGYVDVS-TVDGDTSKLINGHIKATGASFLE 86 (257)
Q Consensus 12 Ga-~~~~s~~ea~~--~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g-~~ivd~S-T~~p~~~~~la~~~~~~G~~~vd 86 (257)
|. +..+|..|+++ ++|+|++|+|+....+.+. .+ +..| .++++.- +.+++.++++.+.++++|+.+.-
T Consensus 48 ~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~----~a---l~~gk~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v 120 (344)
T 3ezy_A 48 GVEKAYKDPHELIEDPNVDAVLVCSSTNTHSELVI----AC---AKAKKHVFCEKPLSLNLADVDRMIEETKKADVILFT 120 (344)
T ss_dssp TCSEEESSHHHHHHCTTCCEEEECSCGGGHHHHHH----HH---HHTTCEEEEESCSCSCHHHHHHHHHHHHHHTCCEEE
T ss_pred CCCceeCCHHHHhcCCCCCEEEEcCCCcchHHHHH----HH---HhcCCeEEEECCCCCCHHHHHHHHHHHHHhCCcEEE
Confidence 54 47899999998 7999999999987766554 22 2334 4777875 89999999999999999987755
Q ss_pred ecCC
Q 025140 87 APVS 90 (257)
Q Consensus 87 apV~ 90 (257)
+...
T Consensus 121 ~~~~ 124 (344)
T 3ezy_A 121 GFNR 124 (344)
T ss_dssp ECGG
T ss_pred eecc
Confidence 5443
No 157
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=94.06 E-value=0.1 Score=45.49 Aligned_cols=67 Identities=15% Similarity=0.133 Sum_probs=53.6
Q ss_pred CccccCCHHHHHhc--CCEEEEecCChHHHHHHhcCCCcccccCCCCC-EEEEcC-CCCHHHHHHHHHHHHHcCCcEE
Q 025140 12 RCRYQPSPDEVAAS--CDVTFAMLADPESAMDVACGKHGAASGMGPGK-GYVDVS-TVDGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 12 Ga~~~~s~~ea~~~--advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~-~ivd~S-T~~p~~~~~la~~~~~~G~~~v 85 (257)
|.+..+|..|++++ .|+|++|+|+....+-+. . .+..|+ ++++.- +.+++.++++.+.++++|+.+.
T Consensus 52 ~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~----~---al~aGkhV~~EKPla~~~~e~~~l~~~a~~~g~~~~ 122 (352)
T 3kux_A 52 AIPVVSDPQMLFNDPSIDLIVIPTPNDTHFPLAQ----S---ALAAGKHVVVDKPFTVTLSQANALKEHADDAGLLLS 122 (352)
T ss_dssp SCCEESCHHHHHHCSSCCEEEECSCTTTHHHHHH----H---HHHTTCEEEECSSCCSCHHHHHHHHHHHHHTTCCEE
T ss_pred CCceECCHHHHhcCCCCCEEEEeCChHHHHHHHH----H---HHHCCCcEEEECCCcCCHHHHHHHHHHHHHcCCeEE
Confidence 67788999999986 899999999987766554 1 233454 788877 8999999999999999888664
No 158
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=94.05 E-value=0.098 Score=45.58 Aligned_cols=73 Identities=7% Similarity=0.027 Sum_probs=56.2
Q ss_pred cCccccCCHHHHHh--cCCEEEEecCChHHHHHHhcCCCcccccCCCC-CEEEEcC-CCCHHHHHHHHHHHHHcCCcEEE
Q 025140 11 SRCRYQPSPDEVAA--SCDVTFAMLADPESAMDVACGKHGAASGMGPG-KGYVDVS-TVDGDTSKLINGHIKATGASFLE 86 (257)
Q Consensus 11 ~Ga~~~~s~~ea~~--~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g-~~ivd~S-T~~p~~~~~la~~~~~~G~~~vd 86 (257)
.|++..+|..|+++ +.|+|++|+|+....+.+. .+ +..| .++++.- +.+++.++++.+.++++|..+.-
T Consensus 59 ~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~----~a---l~~gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v 131 (354)
T 3q2i_A 59 TGARGHASLTDMLAQTDADIVILTTPSGLHPTQSI----EC---SEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFV 131 (354)
T ss_dssp HCCEEESCHHHHHHHCCCSEEEECSCGGGHHHHHH----HH---HHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred cCCceeCCHHHHhcCCCCCEEEECCCcHHHHHHHH----HH---HHCCCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEE
Confidence 37888999999997 7999999999987766554 22 2234 4666664 78999999999999999988765
Q ss_pred ecCC
Q 025140 87 APVS 90 (257)
Q Consensus 87 apV~ 90 (257)
+...
T Consensus 132 ~~~~ 135 (354)
T 3q2i_A 132 VKQN 135 (354)
T ss_dssp CCGG
T ss_pred EEcc
Confidence 5443
No 159
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=94.04 E-value=0.14 Score=44.77 Aligned_cols=70 Identities=14% Similarity=0.060 Sum_probs=54.7
Q ss_pred CccccCCHHHHHhc--CCEEEEecCChHHHHHHhcCCCcccccCCCC-CEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEe
Q 025140 12 RCRYQPSPDEVAAS--CDVTFAMLADPESAMDVACGKHGAASGMGPG-KGYVDVS-TVDGDTSKLINGHIKATGASFLEA 87 (257)
Q Consensus 12 Ga~~~~s~~ea~~~--advvi~~l~~~~~v~~v~~~~~~~~~~l~~g-~~ivd~S-T~~p~~~~~la~~~~~~G~~~vda 87 (257)
|.+..+|..|++++ .|+|++|+|+....+-+. .+ +..| .++++.- +.+++.++++.+.++++|+.+.-+
T Consensus 50 ~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~----~a---l~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~ 122 (362)
T 3fhl_A 50 QASIVRSFKELTEDPEIDLIVVNTPDNTHYEYAG----MA---LEAGKNVVVEKPFTSTTKQGEELIALAKKKGLMLSVY 122 (362)
T ss_dssp TSEEESCSHHHHTCTTCCEEEECSCGGGHHHHHH----HH---HHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCceECCHHHHhcCCCCCEEEEeCChHHHHHHHH----HH---HHCCCeEEEecCCCCCHHHHHHHHHHHHHcCCEEEEE
Confidence 67888999999987 899999999987766554 22 2334 4777775 789999999999999998876543
Q ss_pred c
Q 025140 88 P 88 (257)
Q Consensus 88 p 88 (257)
.
T Consensus 123 ~ 123 (362)
T 3fhl_A 123 Q 123 (362)
T ss_dssp C
T ss_pred e
Confidence 3
No 160
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=94.01 E-value=0.013 Score=50.38 Aligned_cols=65 Identities=15% Similarity=0.055 Sum_probs=46.0
Q ss_pred CCHHHHHhcCCEEEEecCChHHH--HHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEe
Q 025140 17 PSPDEVAASCDVTFAMLADPESA--MDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEA 87 (257)
Q Consensus 17 ~s~~ea~~~advvi~~l~~~~~v--~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vda 87 (257)
+++.+++.++|+||.|+|.+..- ..+... .+.+.++.+++|+++. |..++ +.++++++|+.++|+
T Consensus 196 ~~~~~~~~~aDivIn~t~~~~~~~~~~~~i~----~~~l~~~~~v~D~~y~-P~~T~-ll~~A~~~G~~~v~G 262 (297)
T 2egg_A 196 AEAETRLAEYDIIINTTSVGMHPRVEVQPLS----LERLRPGVIVSDIIYN-PLETK-WLKEAKARGARVQNG 262 (297)
T ss_dssp HHHHHTGGGCSEEEECSCTTCSSCCSCCSSC----CTTCCTTCEEEECCCS-SSSCH-HHHHHHHTTCEEECS
T ss_pred HHHHhhhccCCEEEECCCCCCCCCCCCCCCC----HHHcCCCCEEEEcCCC-CCCCH-HHHHHHHCcCEEECC
Confidence 35667788999999999976421 111111 1345689999999995 55554 778899999988866
No 161
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=93.96 E-value=0.11 Score=45.22 Aligned_cols=75 Identities=13% Similarity=0.082 Sum_probs=57.3
Q ss_pred hhh-cCccccCCHHHHHh--cCCEEEEecCChHHHHHHhcCCCcccccCCCC-CEEEEcC-CCCHHHHHHHHHHHHHcCC
Q 025140 8 FYY-SRCRYQPSPDEVAA--SCDVTFAMLADPESAMDVACGKHGAASGMGPG-KGYVDVS-TVDGDTSKLINGHIKATGA 82 (257)
Q Consensus 8 ~~~-~Ga~~~~s~~ea~~--~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g-~~ivd~S-T~~p~~~~~la~~~~~~G~ 82 (257)
+.+ .|+...+|..|+++ +.|+|++|+|+....+-+. .+ +..| .++++.- +.++++++++.+.++++|+
T Consensus 69 ~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~----~a---l~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g~ 141 (350)
T 3rc1_A 69 FTERFGGEPVEGYPALLERDDVDAVYVPLPAVLHAEWID----RA---LRAGKHVLAEKPLTTDRPQAERLFAVARERGL 141 (350)
T ss_dssp HHHHHCSEEEESHHHHHTCTTCSEEEECCCGGGHHHHHH----HH---HHTTCEEEEESSSCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHcCCCCcCCHHHHhcCCCCCEEEECCCcHHHHHHHH----HH---HHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCC
Confidence 443 38888899999997 5899999999988766554 22 2334 4777775 8899999999999999998
Q ss_pred cEEEecC
Q 025140 83 SFLEAPV 89 (257)
Q Consensus 83 ~~vdapV 89 (257)
.+..+..
T Consensus 142 ~~~v~~~ 148 (350)
T 3rc1_A 142 LLMENFM 148 (350)
T ss_dssp CEEEECG
T ss_pred EEEEEec
Confidence 7765543
No 162
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=93.95 E-value=0.11 Score=45.26 Aligned_cols=70 Identities=7% Similarity=0.002 Sum_probs=54.1
Q ss_pred cCccccCCHHHHHhc--CCEEEEecCChHHHHHHhcCCCcccccCCCC-CEEEEcC-CCCHHHHHHHHHHHHHcCCcEEE
Q 025140 11 SRCRYQPSPDEVAAS--CDVTFAMLADPESAMDVACGKHGAASGMGPG-KGYVDVS-TVDGDTSKLINGHIKATGASFLE 86 (257)
Q Consensus 11 ~Ga~~~~s~~ea~~~--advvi~~l~~~~~v~~v~~~~~~~~~~l~~g-~~ivd~S-T~~p~~~~~la~~~~~~G~~~vd 86 (257)
.|++..+|..|++++ .|+|++|+|+....+-+. .+ +..| .++++.- +.+++.++++.+.++++|+.+.-
T Consensus 49 ~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~----~a---l~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v 121 (349)
T 3i23_A 49 KGVNFTADLNELLTDPEIELITICTPAHTHYDLAK----QA---ILAGKSVIVEKPFCDTLEHAEELFALGQEKGVVVMP 121 (349)
T ss_dssp TTCEEESCTHHHHSCTTCCEEEECSCGGGHHHHHH----HH---HHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCeEECCHHHHhcCCCCCEEEEeCCcHHHHHHHH----HH---HHcCCEEEEECCCcCCHHHHHHHHHHHHHcCCeEEE
Confidence 477889999999986 899999999987766554 12 2344 4677765 78899999999999999887643
Q ss_pred e
Q 025140 87 A 87 (257)
Q Consensus 87 a 87 (257)
+
T Consensus 122 ~ 122 (349)
T 3i23_A 122 Y 122 (349)
T ss_dssp C
T ss_pred E
Confidence 3
No 163
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=93.93 E-value=0.1 Score=44.37 Aligned_cols=74 Identities=16% Similarity=0.096 Sum_probs=57.7
Q ss_pred CccccCCHHHHHh--cCCEEEEecCChHHHHHHhcCCCcccccCCCCC-EEEEc-CCCCHHHHHHHHHHHHHcCCcEEEe
Q 025140 12 RCRYQPSPDEVAA--SCDVTFAMLADPESAMDVACGKHGAASGMGPGK-GYVDV-STVDGDTSKLINGHIKATGASFLEA 87 (257)
Q Consensus 12 Ga~~~~s~~ea~~--~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~-~ivd~-ST~~p~~~~~la~~~~~~G~~~vda 87 (257)
|+. ..|..|+++ +.|+|++|+|+....+.+. ..+..|+ ++++. -+.++++++++.+.++++|+.+..+
T Consensus 51 g~~-~~~~~ell~~~~vD~V~i~tp~~~H~~~~~-------~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~~~ 122 (294)
T 1lc0_A 51 EVR-QISLEDALRSQEIDVAYICSESSSHEDYIR-------QFLQAGKHVLVEYPMTLSFAAAQELWELAAQKGRVLHEE 122 (294)
T ss_dssp TEE-BCCHHHHHHCSSEEEEEECSCGGGHHHHHH-------HHHHTTCEEEEESCSCSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCC-CCCHHHHhcCCCCCEEEEeCCcHhHHHHHH-------HHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEE
Confidence 444 489999997 6899999999987766554 2233455 78886 6789999999999999999998888
Q ss_pred cCCCCh
Q 025140 88 PVSGSK 93 (257)
Q Consensus 88 pV~g~~ 93 (257)
+....-
T Consensus 123 ~~~r~~ 128 (294)
T 1lc0_A 123 HVELLM 128 (294)
T ss_dssp CGGGGS
T ss_pred EhHhcc
Confidence 766543
No 164
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=93.91 E-value=0.12 Score=45.34 Aligned_cols=70 Identities=14% Similarity=0.108 Sum_probs=53.3
Q ss_pred CccccCCHHHHHh--cCCEEEEecCChHHHHHHhcCCCcccccCCCCC-EEEEcC-CCCHHHHHHHHHHHHHcCCcEEEe
Q 025140 12 RCRYQPSPDEVAA--SCDVTFAMLADPESAMDVACGKHGAASGMGPGK-GYVDVS-TVDGDTSKLINGHIKATGASFLEA 87 (257)
Q Consensus 12 Ga~~~~s~~ea~~--~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~-~ivd~S-T~~p~~~~~la~~~~~~G~~~vda 87 (257)
|.+..+|..|+++ +.|+|++|+|+....+-+. ..+..|+ ++++.- +.+++.++++.+.++++|+.+.-+
T Consensus 52 ~~~~~~~~~~ll~~~~~D~V~i~tp~~~H~~~~~-------~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~ 124 (364)
T 3e82_A 52 DVTVIASPEAAVQHPDVDLVVIASPNATHAPLAR-------LALNAGKHVVVDKPFTLDMQEARELIALAEEKQRLLSVF 124 (364)
T ss_dssp TSEEESCHHHHHTCTTCSEEEECSCGGGHHHHHH-------HHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEEC
T ss_pred CCcEECCHHHHhcCCCCCEEEEeCChHHHHHHHH-------HHHHCCCcEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEE
Confidence 6778899999998 7899999999987766554 2234555 455442 789999999999999998876443
Q ss_pred c
Q 025140 88 P 88 (257)
Q Consensus 88 p 88 (257)
.
T Consensus 125 ~ 125 (364)
T 3e82_A 125 H 125 (364)
T ss_dssp C
T ss_pred e
Confidence 3
No 165
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=93.87 E-value=0.14 Score=44.76 Aligned_cols=70 Identities=11% Similarity=0.121 Sum_probs=54.2
Q ss_pred ccccCCHHHHHh--cCCEEEEecCChHHHHHHhcCCCcccccCCCCC-EEEEc-CCCCHHHHHHHHHHHHHcCCcEEEec
Q 025140 13 CRYQPSPDEVAA--SCDVTFAMLADPESAMDVACGKHGAASGMGPGK-GYVDV-STVDGDTSKLINGHIKATGASFLEAP 88 (257)
Q Consensus 13 a~~~~s~~ea~~--~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~-~ivd~-ST~~p~~~~~la~~~~~~G~~~vdap 88 (257)
....++..|+++ +.|+|++|+|+....+-+. ..+..|+ ++++. .+.+++.++++.+.++++|+.+..+.
T Consensus 57 ~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~-------~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~g~~~~~~~ 129 (362)
T 1ydw_A 57 TKIHGSYESLLEDPEIDALYVPLPTSLHVEWAI-------KAAEKGKHILLEKPVAMNVTEFDKIVDACEANGVQIMDGT 129 (362)
T ss_dssp CEEESSHHHHHHCTTCCEEEECCCGGGHHHHHH-------HHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTCCEEECC
T ss_pred CeeeCCHHHHhcCCCCCEEEEcCChHHHHHHHH-------HHHHCCCeEEEecCCcCCHHHHHHHHHHHHHcCCEEEEEE
Confidence 467789999997 5899999999987655443 2234565 66665 57889999999999999999887765
Q ss_pred C
Q 025140 89 V 89 (257)
Q Consensus 89 V 89 (257)
.
T Consensus 130 ~ 130 (362)
T 1ydw_A 130 M 130 (362)
T ss_dssp C
T ss_pred e
Confidence 4
No 166
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=93.78 E-value=0.084 Score=45.88 Aligned_cols=68 Identities=13% Similarity=0.095 Sum_probs=52.5
Q ss_pred CccccCCHHHHHhc--CCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcC--CCCHHHHHHHHHHHHHcCCcEEE
Q 025140 12 RCRYQPSPDEVAAS--CDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVS--TVDGDTSKLINGHIKATGASFLE 86 (257)
Q Consensus 12 Ga~~~~s~~ea~~~--advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~S--T~~p~~~~~la~~~~~~G~~~vd 86 (257)
|.+..+|..|++++ .|+|++|+|+....+-+. ..+..|+-|+--- +.+++.++++.+.++++|+.+.-
T Consensus 50 ~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~-------~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v 121 (345)
T 3f4l_A 50 HIHFTSDLDEVLNDPDVKLVVVCTHADSHFEYAK-------RALEAGKNVLVEKPFTPTLAQAKELFALAKSKGLTVTP 121 (345)
T ss_dssp TCEEESCTHHHHTCTTEEEEEECSCGGGHHHHHH-------HHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred CCceECCHHHHhcCCCCCEEEEcCChHHHHHHHH-------HHHHcCCcEEEeCCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 77888999999986 899999999988766554 2234565444433 77899999999999999887643
No 167
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=93.75 E-value=0.076 Score=47.86 Aligned_cols=71 Identities=13% Similarity=0.076 Sum_probs=54.9
Q ss_pred ccCCHHHHHh--cCCEEEEecCChHHHHHHhcCCCcccccCCCCC-EEEEc-CCCCHHHHHHHHHHHHHcCCcEEEecCC
Q 025140 15 YQPSPDEVAA--SCDVTFAMLADPESAMDVACGKHGAASGMGPGK-GYVDV-STVDGDTSKLINGHIKATGASFLEAPVS 90 (257)
Q Consensus 15 ~~~s~~ea~~--~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~-~ivd~-ST~~p~~~~~la~~~~~~G~~~vdapV~ 90 (257)
..+|..|+++ +.|+|++|+|+....+-+. . .+..|+ ++++. .+.++++.++|.+.++++|+.+..+...
T Consensus 138 ~~~~~~~ll~~~~vD~V~iatp~~~h~~~~~----~---al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~ 210 (433)
T 1h6d_A 138 DYSNFDKIAKDPKIDAVYIILPNSLHAEFAI----R---AFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMIGYRC 210 (433)
T ss_dssp CSSSGGGGGGCTTCCEEEECSCGGGHHHHHH----H---HHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTCCEEECCGG
T ss_pred ccCCHHHHhcCCCCCEEEEcCCchhHHHHHH----H---HHHCCCcEEEcCCCCCCHHHHHHHHHHHHHhCCeEEEEech
Confidence 5789999987 6899999999987766554 1 233455 77775 5788999999999999999888776554
Q ss_pred CC
Q 025140 91 GS 92 (257)
Q Consensus 91 g~ 92 (257)
..
T Consensus 211 R~ 212 (433)
T 1h6d_A 211 HY 212 (433)
T ss_dssp GG
T ss_pred hc
Confidence 43
No 168
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=93.73 E-value=0.031 Score=47.66 Aligned_cols=74 Identities=14% Similarity=0.045 Sum_probs=50.9
Q ss_pred hhhcCcccc--CCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEE
Q 025140 8 FYYSRCRYQ--PSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 8 ~~~~Ga~~~--~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~v 85 (257)
+.+.|++.. +++.++++++|+|++++|.. . .+ +..++.++++.++||++..+..+ .+ +.++..|+.++
T Consensus 194 ~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~~-----~-i~-~~~l~~mk~~~~lin~ar~~~~~--~~-~~a~~~Gv~~~ 263 (293)
T 3d4o_A 194 IAEMGMEPFHISKAAQELRDVDVCINTIPAL-----V-VT-ANVLAEMPSHTFVIDLASKPGGT--DF-RYAEKRGIKAL 263 (293)
T ss_dssp HHHTTSEEEEGGGHHHHTTTCSEEEECCSSC-----C-BC-HHHHHHSCTTCEEEECSSTTCSB--CH-HHHHHHTCEEE
T ss_pred HHHCCCeecChhhHHHHhcCCCEEEECCChH-----H-hC-HHHHHhcCCCCEEEEecCCCCCC--CH-HHHHHCCCEEE
Confidence 445576643 57889999999999999962 1 11 12345678999999999855443 23 55567788887
Q ss_pred EecCCC
Q 025140 86 EAPVSG 91 (257)
Q Consensus 86 dapV~g 91 (257)
+.|-..
T Consensus 264 ~~~~l~ 269 (293)
T 3d4o_A 264 LVPGLP 269 (293)
T ss_dssp ECCCHH
T ss_pred ECCCCC
Confidence 776543
No 169
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=93.47 E-value=0.095 Score=45.47 Aligned_cols=65 Identities=14% Similarity=0.154 Sum_probs=52.1
Q ss_pred ccccCCHHHHHhc--CCEEEEecCChHHHHHHhcCCCcccccCCCC-CEEEEcC-CCCHHHHHHHHHHHHHcCCcE
Q 025140 13 CRYQPSPDEVAAS--CDVTFAMLADPESAMDVACGKHGAASGMGPG-KGYVDVS-TVDGDTSKLINGHIKATGASF 84 (257)
Q Consensus 13 a~~~~s~~ea~~~--advvi~~l~~~~~v~~v~~~~~~~~~~l~~g-~~ivd~S-T~~p~~~~~la~~~~~~G~~~ 84 (257)
.+..+|..|++++ .|+|++|+|+....+-+. .+ +..| .++++.- +.+++.++++.+.++++|..+
T Consensus 52 ~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~----~a---l~~Gk~vl~EKP~a~~~~e~~~l~~~a~~~g~~~ 120 (344)
T 3mz0_A 52 ATVYPNDDSLLADENVDAVLVTSWGPAHESSVL----KA---IKAQKYVFCEKPLATTAEGCMRIVEEEIKVGKRL 120 (344)
T ss_dssp CEEESSHHHHHHCTTCCEEEECSCGGGHHHHHH----HH---HHTTCEEEECSCSCSSHHHHHHHHHHHHHHSSCC
T ss_pred CeeeCCHHHHhcCCCCCEEEECCCchhHHHHHH----HH---HHCCCcEEEcCCCCCCHHHHHHHHHHHHHHCCEE
Confidence 6788999999986 899999999988776554 22 3344 4777775 889999999999999988765
No 170
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=93.42 E-value=0.14 Score=44.83 Aligned_cols=72 Identities=7% Similarity=-0.123 Sum_probs=53.8
Q ss_pred hhhhc--CccccCCHHHHHhcC--CEEEEecCChHHHHHHhcCCCcccccCCCCC-EEEEcC-CCCHHHHHHHHHHHHHc
Q 025140 7 AFYYS--RCRYQPSPDEVAASC--DVTFAMLADPESAMDVACGKHGAASGMGPGK-GYVDVS-TVDGDTSKLINGHIKAT 80 (257)
Q Consensus 7 ~~~~~--Ga~~~~s~~ea~~~a--dvvi~~l~~~~~v~~v~~~~~~~~~~l~~g~-~ivd~S-T~~p~~~~~la~~~~~~ 80 (257)
.+.+. +....+|..|++++. |+|++|+|+....+-+. .+ +..|+ ++++.- +.+++.++++.+.++++
T Consensus 46 ~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~----~a---l~aGkhVl~EKPla~~~~e~~~l~~~a~~~ 118 (359)
T 3m2t_A 46 RVHRFISDIPVLDNVPAMLNQVPLDAVVMAGPPQLHFEMGL----LA---MSKGVNVFVEKPPCATLEELETLIDAARRS 118 (359)
T ss_dssp GGGGTSCSCCEESSHHHHHHHSCCSEEEECSCHHHHHHHHH----HH---HHTTCEEEECSCSCSSHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCcccCCHHHHhcCCCCCEEEEcCCcHHHHHHHH----HH---HHCCCeEEEECCCcCCHHHHHHHHHHHHHc
Confidence 45544 567889999999854 99999999887766554 22 33444 677764 78999999999999988
Q ss_pred CCcEE
Q 025140 81 GASFL 85 (257)
Q Consensus 81 G~~~v 85 (257)
|+.+.
T Consensus 119 g~~~~ 123 (359)
T 3m2t_A 119 DVVSG 123 (359)
T ss_dssp TCCEE
T ss_pred CCEEE
Confidence 87653
No 171
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=93.35 E-value=0.14 Score=43.87 Aligned_cols=73 Identities=11% Similarity=-0.008 Sum_probs=51.4
Q ss_pred Cccc-cCCHHHHH-hcCCEEEEecCChHHHHHHhcCCCcccccCCCCC-EEEEc-CCCCHHHHHHHHHHHHHcCCcEEEe
Q 025140 12 RCRY-QPSPDEVA-ASCDVTFAMLADPESAMDVACGKHGAASGMGPGK-GYVDV-STVDGDTSKLINGHIKATGASFLEA 87 (257)
Q Consensus 12 Ga~~-~~s~~ea~-~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~-~ivd~-ST~~p~~~~~la~~~~~~G~~~vda 87 (257)
|... ..+..|++ .++|+|++|+|+....+-+. .+ +..|+ ++++. .+.+++.++++.+.++++|+.+..+
T Consensus 48 g~~~~~~~~~~~l~~~~D~V~i~tp~~~h~~~~~----~a---l~~Gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~ 120 (323)
T 1xea_A 48 RVSATCTDYRDVLQYGVDAVMIHAATDVHSTLAA----FF---LHLGIPTFVDKPLAASAQECENLYELAEKHHQPLYVG 120 (323)
T ss_dssp TCCCCCSSTTGGGGGCCSEEEECSCGGGHHHHHH----HH---HHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCccccCHHHHhhcCCCEEEEECCchhHHHHHH----HH---HHCCCeEEEeCCCcCCHHHHHHHHHHHHhcCCeEEEe
Confidence 6543 44445555 67999999999877655443 12 33454 77775 6788999999999999999887765
Q ss_pred cCCC
Q 025140 88 PVSG 91 (257)
Q Consensus 88 pV~g 91 (257)
-...
T Consensus 121 ~~~r 124 (323)
T 1xea_A 121 FNRR 124 (323)
T ss_dssp CGGG
T ss_pred eccc
Confidence 4433
No 172
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=93.23 E-value=0.2 Score=43.78 Aligned_cols=69 Identities=6% Similarity=0.070 Sum_probs=53.6
Q ss_pred CccccCCHHHHHh--cCCEEEEecCChHHHHHHhcCCCcccccCCCC-CEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEe
Q 025140 12 RCRYQPSPDEVAA--SCDVTFAMLADPESAMDVACGKHGAASGMGPG-KGYVDVS-TVDGDTSKLINGHIKATGASFLEA 87 (257)
Q Consensus 12 Ga~~~~s~~ea~~--~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g-~~ivd~S-T~~p~~~~~la~~~~~~G~~~vda 87 (257)
|.+..+|..|+++ +.|+|++|+|+....+-+. . .+..| .++++.- +.+++.++++.+.++++|+.+.-+
T Consensus 50 ~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~----~---al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~v~ 122 (358)
T 3gdo_A 50 DAEVVHELEEITNDPAIELVIVTTPSGLHYEHTM----A---CIQAGKHVVMEKPMTATAEEGETLKRAADEKGVLLSVY 122 (358)
T ss_dssp TSEEESSTHHHHTCTTCCEEEECSCTTTHHHHHH----H---HHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCceECCHHHHhcCCCCCEEEEcCCcHHHHHHHH----H---HHHcCCeEEEecCCcCCHHHHHHHHHHHHHcCCeEEEe
Confidence 6788899999998 6899999999987766554 1 23344 4677764 788999999999999988876433
No 173
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=92.94 E-value=0.16 Score=44.86 Aligned_cols=75 Identities=12% Similarity=0.092 Sum_probs=57.2
Q ss_pred cCccccCCHHHHHhc--CCEEEEecCChHHHHHHhcCCCcccccCCCCC-EEEEcC-CCCHHHHHHHHHHHHHcCCcEEE
Q 025140 11 SRCRYQPSPDEVAAS--CDVTFAMLADPESAMDVACGKHGAASGMGPGK-GYVDVS-TVDGDTSKLINGHIKATGASFLE 86 (257)
Q Consensus 11 ~Ga~~~~s~~ea~~~--advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~-~ivd~S-T~~p~~~~~la~~~~~~G~~~vd 86 (257)
.|+...+|..|++++ .|+|++|+|+....+-+. .+ +..|+ ++++.- +.+++.++++.+.++++|+.+.-
T Consensus 48 ~g~~~~~~~~ell~~~~vD~V~i~tp~~~H~~~~~----~a---l~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v 120 (387)
T 3moi_A 48 YGIPVFATLAEMMQHVQMDAVYIASPHQFHCEHVV----QA---SEQGLHIIVEKPLTLSRDEADRMIEAVERAGVHLVV 120 (387)
T ss_dssp HTCCEESSHHHHHHHSCCSEEEECSCGGGHHHHHH----HH---HHTTCEEEECSCCCSCHHHHHHHHHHHHHHTCCEEE
T ss_pred cCCCeECCHHHHHcCCCCCEEEEcCCcHHHHHHHH----HH---HHCCCceeeeCCccCCHHHHHHHHHHHHHhCCeEEE
Confidence 388889999999975 899999999987765544 22 23344 667764 78999999999999999988766
Q ss_pred ecCCCC
Q 025140 87 APVSGS 92 (257)
Q Consensus 87 apV~g~ 92 (257)
+.....
T Consensus 121 ~~~~R~ 126 (387)
T 3moi_A 121 GTSRSH 126 (387)
T ss_dssp CCCGGG
T ss_pred Eecccc
Confidence 654433
No 174
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=92.92 E-value=0.047 Score=46.37 Aligned_cols=65 Identities=9% Similarity=0.010 Sum_probs=43.2
Q ss_pred cCCHHHHHhcCCEEEEecCChH--HHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEe
Q 025140 16 QPSPDEVAASCDVTFAMLADPE--SAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEA 87 (257)
Q Consensus 16 ~~s~~ea~~~advvi~~l~~~~--~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vda 87 (257)
.+++.++++++|+||.|+|..- .+...+ . .+.+.++.+++|+++.+..+ .+.++++++|++.+|.
T Consensus 166 ~~~~~~~~~~aDiVInaTp~Gm~~~~~~~l-~----~~~l~~~~~V~D~vY~P~~T--~ll~~A~~~G~~~~~G 232 (277)
T 3don_A 166 LSHAESHLDEFDIIINTTPAGMNGNTDSVI-S----LNRLASHTLVSDIVYNPYKT--PILIEAEQRGNPIYNG 232 (277)
T ss_dssp HHHHHHTGGGCSEEEECCC-------CCSS-C----CTTCCSSCEEEESCCSSSSC--HHHHHHHHTTCCEECT
T ss_pred HhhHHHHhcCCCEEEECccCCCCCCCcCCC-C----HHHcCCCCEEEEecCCCCCC--HHHHHHHHCcCEEeCC
Confidence 3456677889999999998642 221121 1 23467899999999985554 5788889999876543
No 175
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=92.53 E-value=0.065 Score=46.73 Aligned_cols=88 Identities=14% Similarity=0.039 Sum_probs=63.0
Q ss_pred CcchhhhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCC
Q 025140 3 TPNNAFYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGA 82 (257)
Q Consensus 3 ~~~~~~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~ 82 (257)
.+.+...+.|.. ..+..|++++||+|++++|-.+..+..+ + ...++.+++|.++||+|-...=....+.+.+++.-+
T Consensus 173 ~~~~~~~~~~~~-~~~l~ell~~sDivslh~Plt~~T~~li-~-~~~l~~mk~~a~lIN~aRG~iVde~aL~~aL~~g~i 249 (334)
T 3kb6_A 173 VKREDLKEKGCV-YTSLDELLKESDVISLHVPYTKETHHMI-N-EERISLMKDGVYLINTARGKVVDTDALYRAYQRGKF 249 (334)
T ss_dssp SCCHHHHHTTCE-ECCHHHHHHHCSEEEECCCCCTTTTTCB-C-HHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCE
T ss_pred ccchhhhhcCce-ecCHHHHHhhCCEEEEcCCCChhhccCc-C-HHHHhhcCCCeEEEecCccccccHHHHHHHHHhCCc
Confidence 444555566665 4689999999999999999887776554 2 245567899999999998888777788888876533
Q ss_pred cEEEecCCCCh
Q 025140 83 SFLEAPVSGSK 93 (257)
Q Consensus 83 ~~vdapV~g~~ 93 (257)
.-.---|+-..
T Consensus 250 ~gA~LDV~~~E 260 (334)
T 3kb6_A 250 SGLGLDVFEDE 260 (334)
T ss_dssp EEEEESCCTTH
T ss_pred eEEEEeCCCCC
Confidence 33333344443
No 176
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=92.47 E-value=0.2 Score=43.73 Aligned_cols=65 Identities=8% Similarity=0.105 Sum_probs=51.6
Q ss_pred ccccCCHHHHHh--cCCEEEEecCChHHHHHHhcCCCcccccCCCC-CEEEEcC-CCCHHHHHHHHHHHHHcCCcE
Q 025140 13 CRYQPSPDEVAA--SCDVTFAMLADPESAMDVACGKHGAASGMGPG-KGYVDVS-TVDGDTSKLINGHIKATGASF 84 (257)
Q Consensus 13 a~~~~s~~ea~~--~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g-~~ivd~S-T~~p~~~~~la~~~~~~G~~~ 84 (257)
++..+|..|+++ +.|+|++|+|+....+-+. .+ +..| .++++.- +.+++.++++.+.++++|..+
T Consensus 73 ~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~----~a---l~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~ 141 (357)
T 3ec7_A 73 AKDYNDYHDLINDKDVEVVIITASNEAHADVAV----AA---LNANKYVFCEKPLAVTAADCQRVIEAEQKNGKRM 141 (357)
T ss_dssp CEEESSHHHHHHCTTCCEEEECSCGGGHHHHHH----HH---HHTTCEEEEESSSCSSHHHHHHHHHHHHHHTSCC
T ss_pred CeeeCCHHHHhcCCCCCEEEEcCCcHHHHHHHH----HH---HHCCCCEEeecCccCCHHHHHHHHHHHHHhCCeE
Confidence 778899999997 4899999999988776554 22 2234 4777765 889999999999999988754
No 177
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=92.24 E-value=0.35 Score=41.62 Aligned_cols=72 Identities=15% Similarity=0.202 Sum_probs=55.3
Q ss_pred Cc-cccCCHHHHHh--cCCEEEEecCChHHHHHHhcCCCcccccCCCC-CEEEEcC-CCCHHHHHHHHHHHHHcCCcEEE
Q 025140 12 RC-RYQPSPDEVAA--SCDVTFAMLADPESAMDVACGKHGAASGMGPG-KGYVDVS-TVDGDTSKLINGHIKATGASFLE 86 (257)
Q Consensus 12 Ga-~~~~s~~ea~~--~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g-~~ivd~S-T~~p~~~~~la~~~~~~G~~~vd 86 (257)
|. +..+|..|+++ +.|+|++|+|+....+-+. .+ +..| .++++.- +.++++++++.+.++++|..+..
T Consensus 50 ~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~----~a---l~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~v 122 (334)
T 3ohs_X 50 DIPKAYGSYEELAKDPNVEVAYVGTQHPQHKAAVM----LC---LAAGKAVLCEKPMGVNAAEVREMVTEARSRGLFLME 122 (334)
T ss_dssp TCSCEESSHHHHHHCTTCCEEEECCCGGGHHHHHH----HH---HHTTCEEEEESSSSSSHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCcccCCHHHHhcCCCCCEEEECCCcHHHHHHHH----HH---HhcCCEEEEECCCCCCHHHHHHHHHHHHHhCCEEEE
Confidence 65 57899999997 5999999999987766554 22 2344 4777764 88999999999999999987765
Q ss_pred ecCC
Q 025140 87 APVS 90 (257)
Q Consensus 87 apV~ 90 (257)
+...
T Consensus 123 ~~~~ 126 (334)
T 3ohs_X 123 AIWT 126 (334)
T ss_dssp ECGG
T ss_pred EEhH
Confidence 5443
No 178
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=91.81 E-value=0.22 Score=45.43 Aligned_cols=69 Identities=12% Similarity=0.011 Sum_probs=53.1
Q ss_pred cccCCHHHHHh--cCCEEEEecCChHHHHHHhcCCCcccccCCCC-------CEEEEc-CCCCHHHHHHHHHHHHHcC-C
Q 025140 14 RYQPSPDEVAA--SCDVTFAMLADPESAMDVACGKHGAASGMGPG-------KGYVDV-STVDGDTSKLINGHIKATG-A 82 (257)
Q Consensus 14 ~~~~s~~ea~~--~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g-------~~ivd~-ST~~p~~~~~la~~~~~~G-~ 82 (257)
+..+|..|+++ +.|+|++|+|+....+-+. .+ +..| .++++. .+.+++++++|.+.++++| +
T Consensus 95 ~~~~d~~ell~~~~vD~V~I~tp~~~H~~~~~----~a---l~aG~~~~~~khVl~EKPla~~~~ea~~l~~~a~~~g~~ 167 (479)
T 2nvw_A 95 TGFDSLESFAQYKDIDMIVVSVKVPEHYEVVK----NI---LEHSSQNLNLRYLYVEWALAASVQQAEELYSISQQRANL 167 (479)
T ss_dssp EEESCHHHHHHCTTCSEEEECSCHHHHHHHHH----HH---HHHSSSCSSCCEEEEESSSSSSHHHHHHHHHHHHTCTTC
T ss_pred eeeCCHHHHhcCCCCCEEEEcCCcHHHHHHHH----HH---HHCCCCcCCceeEEEeCCCcCCHHHHHHHHHHHHHcCCe
Confidence 37899999996 6899999999987766554 12 2334 488888 6889999999999999888 7
Q ss_pred cEEEecC
Q 025140 83 SFLEAPV 89 (257)
Q Consensus 83 ~~vdapV 89 (257)
.+.-+..
T Consensus 168 ~~~v~~~ 174 (479)
T 2nvw_A 168 QTIICLQ 174 (479)
T ss_dssp EEEEECG
T ss_pred EEEEEec
Confidence 6654443
No 179
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=91.66 E-value=0.2 Score=45.15 Aligned_cols=69 Identities=12% Similarity=0.013 Sum_probs=52.2
Q ss_pred ccCCHHHHHh--cCCEEEEecCChHHHHHHhcCCCcccccC----CCCCEEEEc-CCCCHHHHHHHHHHHHHcCCcEEEe
Q 025140 15 YQPSPDEVAA--SCDVTFAMLADPESAMDVACGKHGAASGM----GPGKGYVDV-STVDGDTSKLINGHIKATGASFLEA 87 (257)
Q Consensus 15 ~~~s~~ea~~--~advvi~~l~~~~~v~~v~~~~~~~~~~l----~~g~~ivd~-ST~~p~~~~~la~~~~~~G~~~vda 87 (257)
..+|..|+++ +.|+|++|+|+....+.+. .+++.- ....++++. .+.++++++++.+.++++|+.+..+
T Consensus 77 ~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~----~al~aG~~~~~~khVl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~ 152 (438)
T 3btv_A 77 AFPTLESFASSSTIDMIVIAIQVASHYEVVM----PLLEFSKNNPNLKYLFVEWALACSLDQAESIYKAAAERGVQTIIS 152 (438)
T ss_dssp EESSHHHHHHCSSCSEEEECSCHHHHHHHHH----HHHHHGGGCTTCCEEEEESSCCSSHHHHHHHHHHHHTTTCEEEEE
T ss_pred eeCCHHHHhcCCCCCEEEEeCCcHHHHHHHH----HHHHCCCCcccceeEEecCcccCCHHHHHHHHHHHHHcCCeEEEe
Confidence 7899999997 5899999999987766554 122210 013588886 6789999999999999999877666
No 180
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=91.40 E-value=0.58 Score=41.72 Aligned_cols=70 Identities=13% Similarity=0.030 Sum_probs=53.9
Q ss_pred Cc---cccCCHHHHHhc-------CCEEEEecCChHHHHHHhcCCCcccccCCCCC-EEEEcC-CCCHHHHHHHHHHHHH
Q 025140 12 RC---RYQPSPDEVAAS-------CDVTFAMLADPESAMDVACGKHGAASGMGPGK-GYVDVS-TVDGDTSKLINGHIKA 79 (257)
Q Consensus 12 Ga---~~~~s~~ea~~~-------advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~-~ivd~S-T~~p~~~~~la~~~~~ 79 (257)
|. +..+|..|++++ .|+|++|+|+....+-+. ..+..|+ ++++.- +.+++.++++.+.+++
T Consensus 87 g~~~~~~~~~~~~ll~~~~~~~~~vD~V~I~tp~~~H~~~~~-------~al~aGkhVl~EKPla~~~~ea~~l~~~a~~ 159 (417)
T 3v5n_A 87 GLDPSRVYSDFKEMAIREAKLKNGIEAVAIVTPNHVHYAAAK-------EFLKRGIHVICDKPLTSTLADAKKLKKAADE 159 (417)
T ss_dssp TCCGGGBCSCHHHHHHHHHHCTTCCSEEEECSCTTSHHHHHH-------HHHTTTCEEEEESSSCSSHHHHHHHHHHHHH
T ss_pred CCCcccccCCHHHHHhcccccCCCCcEEEECCCcHHHHHHHH-------HHHhCCCeEEEECCCcCCHHHHHHHHHHHHH
Confidence 66 678999999976 899999999987765444 2233454 777765 7899999999999999
Q ss_pred cCCcEEEec
Q 025140 80 TGASFLEAP 88 (257)
Q Consensus 80 ~G~~~vdap 88 (257)
+|+.+.-+-
T Consensus 160 ~g~~~~v~~ 168 (417)
T 3v5n_A 160 SDALFVLTH 168 (417)
T ss_dssp CSSCEEEEC
T ss_pred cCCEEEEEe
Confidence 998765443
No 181
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=91.33 E-value=1 Score=43.36 Aligned_cols=143 Identities=16% Similarity=0.244 Sum_probs=87.3
Q ss_pred cccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEE-cCCCCHHHHHHHHHHHHHcCCcEEEecCCCC
Q 025140 14 RYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVD-VSTVDGDTSKLINGHIKATGASFLEAPVSGS 92 (257)
Q Consensus 14 ~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd-~ST~~p~~~~~la~~~~~~G~~~vdapV~g~ 92 (257)
+..++. +.+++||+||=+++-.-+++.-++ ..+-+...++.++-. +||++++. |++.+. +--+|+-.=.+..
T Consensus 383 ~~~~~~-~~l~~aDlVIEAV~E~l~iK~~vf--~~le~~~~~~aIlASNTSsl~i~~---ia~~~~-~p~r~ig~HFfnP 455 (742)
T 3zwc_A 383 RFSSST-KELSTVDLVVEAVFEDMNLKKKVF--AELSALCKPGAFLCTNTSALNVDD---IASSTD-RPQLVIGTHFFSP 455 (742)
T ss_dssp EEESCG-GGGGSCSEEEECCCSCHHHHHHHH--HHHHHHSCTTCEEEECCSSSCHHH---HHTTSS-CGGGEEEEECCSS
T ss_pred cccCcH-HHHhhCCEEEEeccccHHHHHHHH--HHHhhcCCCCceEEecCCcCChHH---HHhhcC-CccccccccccCC
Confidence 345555 447799999999999988876555 344455566666544 34455543 443332 2123333322322
Q ss_pred hHHhhcCceE-EEec--CChhHHHHHHHHHHHhcCCceecCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Q 025140 93 KKPAEDGQLI-FLAA--GDKSLYNTVAPLLDIMGKSRFYLGD-VGNGAAMKLVVNMIMGSMMATFSEGLLHSEKVGLDPN 168 (257)
Q Consensus 93 ~~~a~~g~l~-i~~g--g~~~~~~~~~~ll~~~~~~~~~~G~-~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gld~~ 168 (257)
+.. -.|+ |+-| .++++++++..+.+.+++.++.+.+ +| .+.|=+ ....+.|++.+.+. |.++.
T Consensus 456 ~~~---m~LVEvi~g~~Ts~e~~~~~~~~~~~lgK~pV~vkd~pG------Fi~NRi---~~~~~~ea~~l~~e-G~~~~ 522 (742)
T 3zwc_A 456 AHV---MRLLEVIPSRYSSPTTIATVMSLSKKIGKIGVVVGNCYG------FVGNRM---LAPYYNQGFFLLEE-GSKPE 522 (742)
T ss_dssp TTT---CCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEECCCSTT------TTHHHH---HHHHHHHHHHHHHT-TCCHH
T ss_pred CCC---CceEEEecCCCCCHHHHHHHHHHHHHhCCCCcccCCCCC------ccHHHH---hhHHHHHHHHHHHc-CCCHH
Confidence 222 2333 3333 4678999999999999999888876 65 233433 34456777777765 67777
Q ss_pred HHHHHHhh
Q 025140 169 VLVEVVSQ 176 (257)
Q Consensus 169 ~~~~~l~~ 176 (257)
.+-+++..
T Consensus 523 ~id~a~~~ 530 (742)
T 3zwc_A 523 DVDGVLEE 530 (742)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 76666643
No 182
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=90.87 E-value=0.38 Score=43.29 Aligned_cols=67 Identities=12% Similarity=0.038 Sum_probs=51.8
Q ss_pred ccccC----CHHHHHh--cCCEEEEecCChHHHHHHhcCCCcccccCCCCC-EEEEc-CCCCHHHHHHHHHHHHHcCCcE
Q 025140 13 CRYQP----SPDEVAA--SCDVTFAMLADPESAMDVACGKHGAASGMGPGK-GYVDV-STVDGDTSKLINGHIKATGASF 84 (257)
Q Consensus 13 a~~~~----s~~ea~~--~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~-~ivd~-ST~~p~~~~~la~~~~~~G~~~ 84 (257)
.+..+ |..|+++ +.|+|++|+|+....+-+. ..+..|+ ++++. -+.+++.++++.+.++++|..+
T Consensus 73 ~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~h~~~~~-------~al~aGkhV~~EKP~a~~~~ea~~l~~~a~~~g~~~ 145 (444)
T 2ixa_A 73 AKVFGNGNDDYKNMLKDKNIDAVFVSSPWEWHHEHGV-------AAMKAGKIVGMEVSGAITLEECWDYVKVSEQTGVPL 145 (444)
T ss_dssp CEEECSSTTTHHHHTTCTTCCEEEECCCGGGHHHHHH-------HHHHTTCEEEECCCCCSSHHHHHHHHHHHHHHCCCE
T ss_pred CceeccCCCCHHHHhcCCCCCEEEEcCCcHHHHHHHH-------HHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHhCCeE
Confidence 56677 9999997 5899999999987766554 2233455 66776 4788999999999999999876
Q ss_pred EE
Q 025140 85 LE 86 (257)
Q Consensus 85 vd 86 (257)
.-
T Consensus 146 ~v 147 (444)
T 2ixa_A 146 MA 147 (444)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 183
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=90.59 E-value=0.59 Score=39.81 Aligned_cols=69 Identities=9% Similarity=0.075 Sum_probs=48.5
Q ss_pred cCccccCCHHHHHh--cCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCC-CCHHHHHHHHHHHHHcCCcEE
Q 025140 11 SRCRYQPSPDEVAA--SCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVST-VDGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 11 ~Ga~~~~s~~ea~~--~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST-~~p~~~~~la~~~~~~G~~~v 85 (257)
.|....+|+.|+.+ ..|++++++|..... +++ +.+.+. .-+.+|..|+ .+.+..+++.+.++++|++++
T Consensus 54 ~G~~vy~sl~el~~~~~~Dv~ii~vp~~~~~-~~v---~ea~~~--Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~vi 125 (294)
T 2yv1_A 54 HGVPVFDTVKEAVKETDANASVIFVPAPFAK-DAV---FEAIDA--GIELIVVITEHIPVHDTMEFVNYAEDVGVKII 125 (294)
T ss_dssp TTEEEESSHHHHHHHHCCCEEEECCCHHHHH-HHH---HHHHHT--TCSEEEECCSCCCHHHHHHHHHHHHHHTCEEE
T ss_pred CCEeeeCCHHHHhhcCCCCEEEEccCHHHHH-HHH---HHHHHC--CCCEEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 47788899999998 899999999975444 444 233332 1233444454 555667889999999998766
No 184
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10
Probab=90.50 E-value=1.2 Score=38.93 Aligned_cols=118 Identities=8% Similarity=-0.030 Sum_probs=71.3
Q ss_pred cCccccCCHHHHHh-cCCEEEEecCC-hHHHH-HHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEe
Q 025140 11 SRCRYQPSPDEVAA-SCDVTFAMLAD-PESAM-DVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEA 87 (257)
Q Consensus 11 ~Ga~~~~s~~ea~~-~advvi~~l~~-~~~v~-~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vda 87 (257)
.|..+.+|+.++++ .+|++++...+ .-.+. ..+ +.+.+++..|.-||..--..-..-.++.+.++++|+.++|.
T Consensus 74 ~gipv~~d~~~al~~~~d~lvig~a~~gg~l~~~~~---~~I~~Al~~G~nVvsglh~~l~~~pel~~~A~~~Gv~i~dv 150 (350)
T 2g0t_A 74 YDVPVVSSVEKAKEMGAEVLIIGVSNPGGYLEEQIA---TLVKKALSLGMDVISGLHFKISQQTEFLKIAHENGTRIIDI 150 (350)
T ss_dssp SCCBEESSHHHHHHTTCCEEEECCCSCCHHHHHHHH---HHHHHHHHTTCEEEECCCC--CCHHHHHHHHHHHTCCEEES
T ss_pred CCceeeCCHHHHHhcCCCEEEEEecCCCCCCCHHHH---HHHHHHHHcCCcEEeCChhhhhCCHHHHHHHHHCCCEEEEe
Confidence 57788899999986 69999998743 32222 222 34455667788887776655555566888888899999998
Q ss_pred c-------CCCChHHhhcCceEEEecCChhH-----HHHHHHHHHHhcCCceecCC
Q 025140 88 P-------VSGSKKPAEDGQLIFLAAGDKSL-----YNTVAPLLDIMGKSRFYLGD 131 (257)
Q Consensus 88 p-------V~g~~~~a~~g~l~i~~gg~~~~-----~~~~~~ll~~~~~~~~~~G~ 131 (257)
- +..+....-...-.+++|.|.++ -..+...++.-|-++-++++
T Consensus 151 r~~p~~l~v~~g~i~~i~~~ri~v~GTDt~vGKt~t~~~L~~~l~~~G~~v~~v~t 206 (350)
T 2g0t_A 151 RIPPLELDVLRGGIYRKKIKVVGVFGTDCVVGKRTTAVQLWERALEKGIKAGFLAT 206 (350)
T ss_dssp SSCCSSCCCCCSGGGGCCSEEEEEEESSSSSSHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CcCCCcccccccceeeecceEEEEecCCCCccCccHHHHHHHHHHhcCCeEEEEcc
Confidence 3 32222221234435555655433 22334455666666666554
No 185
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=90.38 E-value=0.6 Score=40.57 Aligned_cols=69 Identities=4% Similarity=-0.022 Sum_probs=48.7
Q ss_pred cCccccCCHHHHHh---cCCEEEEecCChHHHHHHhcCCCcccccCCCC-CEEEE-cCCCCHHHHHHHHHHHHHcCCcEE
Q 025140 11 SRCRYQPSPDEVAA---SCDVTFAMLADPESAMDVACGKHGAASGMGPG-KGYVD-VSTVDGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 11 ~Ga~~~~s~~ea~~---~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g-~~ivd-~ST~~p~~~~~la~~~~~~G~~~v 85 (257)
.|.....|++|+.. ++|+.|+++|.+.+...++ +.+.+ .| +.+|- .+-.+....+++.+.++++|.+++
T Consensus 62 ~Gvpvy~sv~ea~~~~p~~DlaVi~vp~~~a~~ai~---ea~~~---~Gv~~vViiT~G~~e~~~~~l~~~a~~~g~rli 135 (334)
T 3mwd_B 62 ILIPVFKNMADAMRKHPEVDVLINFASLRSAYDSTM---ETMNY---AQIRTIAIIAEGIPEALTRKLIKKADQKGVTII 135 (334)
T ss_dssp EEEEEESSHHHHHHHCTTCCEEEECCCTTTHHHHHH---HHTTS---TTCCEEEECCSCCCHHHHHHHHHHHHHHTCEEE
T ss_pred CCceeeCCHHHHhhcCCCCcEEEEecCHHHHHHHHH---HHHHH---CCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 36778899999986 5899999999877766665 22221 22 34444 445555667788888888998876
No 186
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=90.36 E-value=0.64 Score=39.41 Aligned_cols=69 Identities=9% Similarity=0.058 Sum_probs=49.8
Q ss_pred cCccccCCHHHHHh--cCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCC-CCHHHHHHHHHHHHHcCCcEE
Q 025140 11 SRCRYQPSPDEVAA--SCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVST-VDGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 11 ~Ga~~~~s~~ea~~--~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST-~~p~~~~~la~~~~~~G~~~v 85 (257)
.|....+|+.|+.+ ..|++++|+|.+...+.+. .+.+. .-+.+|..|+ .+.+..+++.+.++++|++++
T Consensus 48 ~G~~vy~sl~el~~~~~~D~viI~tP~~~~~~~~~----ea~~~--Gi~~iVi~t~G~~~~~~~~l~~~A~~~gv~li 119 (288)
T 2nu8_A 48 LGLPVFNTVREAVAATGATASVIYVPAPFCKDSIL----EAIDA--GIKLIITITEGIPTLDMLTVKVKLDEAGVRMI 119 (288)
T ss_dssp TTEEEESSHHHHHHHHCCCEEEECCCGGGHHHHHH----HHHHT--TCSEEEECCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred CCeeccCCHHHHhhcCCCCEEEEecCHHHHHHHHH----HHHHC--CCCEEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 47778899999998 8999999999876654443 33331 1245555655 556677899999999998776
No 187
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=90.33 E-value=0.63 Score=39.49 Aligned_cols=69 Identities=19% Similarity=0.128 Sum_probs=48.2
Q ss_pred cCccccCCHHHHHh--cCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCC-CCHHHHHHHHHHHHHcCCcEE
Q 025140 11 SRCRYQPSPDEVAA--SCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVST-VDGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 11 ~Ga~~~~s~~ea~~--~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST-~~p~~~~~la~~~~~~G~~~v 85 (257)
.|....+|+.|+.+ ..|++|+++|.+.. .+++ +.+.+.- -+.+|..|+ .+.+..+++.+.++++|++++
T Consensus 48 ~G~~vy~sl~el~~~~~~Dv~Ii~vp~~~~-~~~~---~ea~~~G--i~~vVi~t~G~~~~~~~~l~~~a~~~gi~vi 119 (288)
T 1oi7_A 48 LGVPVYDTVKEAVAHHEVDASIIFVPAPAA-ADAA---LEAAHAG--IPLIVLITEGIPTLDMVRAVEEIKALGSRLI 119 (288)
T ss_dssp TTEEEESSHHHHHHHSCCSEEEECCCHHHH-HHHH---HHHHHTT--CSEEEECCSCCCHHHHHHHHHHHHHHTCEEE
T ss_pred CCEEeeCCHHHHhhcCCCCEEEEecCHHHH-HHHH---HHHHHCC--CCEEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 57788899999998 89999999997544 4444 2333321 133444554 455667788889999998766
No 188
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=89.94 E-value=0.077 Score=47.48 Aligned_cols=46 Identities=20% Similarity=0.172 Sum_probs=32.7
Q ss_pred CHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCC
Q 025140 18 SPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVST 64 (257)
Q Consensus 18 s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST 64 (257)
+++|+++++|+||.|+..+......+.. ++.++.+++|.+|||+|.
T Consensus 268 ~l~e~l~~aDVVI~tvlipg~~ap~Lvt-~emv~~Mk~GsVIVDvA~ 313 (405)
T 4dio_A 268 LVAEHIAKQDIVITTALIPGRPAPRLVT-REMLDSMKPGSVVVDLAV 313 (405)
T ss_dssp HHHHHHHTCSEEEECCCCSSSCCCCCBC-HHHHTTSCTTCEEEETTG
T ss_pred HHHHHhcCCCEEEECCcCCCCCCCEEec-HHHHhcCCCCCEEEEEeC
Confidence 6788999999999997544321112221 356678899999999984
No 189
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=89.86 E-value=0.74 Score=40.68 Aligned_cols=71 Identities=4% Similarity=-0.137 Sum_probs=53.6
Q ss_pred cCc---cccCCHHHHHhc-------CCEEEEecCChHHHHHHhcCCCcccccCCCCC-EEEEc-CCCCHHHHHHHHHHHH
Q 025140 11 SRC---RYQPSPDEVAAS-------CDVTFAMLADPESAMDVACGKHGAASGMGPGK-GYVDV-STVDGDTSKLINGHIK 78 (257)
Q Consensus 11 ~Ga---~~~~s~~ea~~~-------advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~-~ivd~-ST~~p~~~~~la~~~~ 78 (257)
.|. +..+|..|++++ .|+|++|+|+....+-+. .+ +..|+ ++++. -+.+++.++++.+.++
T Consensus 61 ~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~i~tp~~~H~~~~~----~a---l~aGkhVl~EKPla~~~~ea~~l~~~a~ 133 (398)
T 3dty_A 61 LGVDSERCYADYLSMFEQEARRADGIQAVSIATPNGTHYSITK----AA---LEAGLHVVCEKPLCFTVEQAENLRELSH 133 (398)
T ss_dssp TTCCGGGBCSSHHHHHHHHTTCTTCCSEEEEESCGGGHHHHHH----HH---HHTTCEEEECSCSCSCHHHHHHHHHHHH
T ss_pred hCCCcceeeCCHHHHHhcccccCCCCCEEEECCCcHHHHHHHH----HH---HHCCCeEEEeCCCcCCHHHHHHHHHHHH
Confidence 466 688999999975 899999999987765554 22 23344 66665 4788999999999999
Q ss_pred HcCCcEEEec
Q 025140 79 ATGASFLEAP 88 (257)
Q Consensus 79 ~~G~~~vdap 88 (257)
++|+.+.-+-
T Consensus 134 ~~g~~~~v~~ 143 (398)
T 3dty_A 134 KHNRIVGVTY 143 (398)
T ss_dssp HTTCCEEECC
T ss_pred HcCCeEEEEe
Confidence 9998765443
No 190
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=89.71 E-value=0.47 Score=42.94 Aligned_cols=67 Identities=15% Similarity=0.199 Sum_probs=44.6
Q ss_pred ccccCCHHHHHh--cCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcC-CCCHHHHHHHHHHHHHcCCcEE
Q 025140 13 CRYQPSPDEVAA--SCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVS-TVDGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 13 a~~~~s~~ea~~--~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~S-T~~p~~~~~la~~~~~~G~~~v 85 (257)
....+|..++++ +.|+|++|.|++..-.+.. ..++..|+-|+-.+ ..+....++|.+.++++|+.|.
T Consensus 93 ~~v~~D~eeLL~d~dIDaVviaTp~p~~H~e~a------~~AL~AGKHVv~~nk~l~~~eg~eL~~~A~e~Gvvl~ 162 (446)
T 3upl_A 93 IAVTDDNDLILSNPLIDVIIDATGIPEVGAETG------IAAIRNGKHLVMMNVEADVTIGPYLKAQADKQGVIYS 162 (446)
T ss_dssp EEEESCHHHHHTCTTCCEEEECSCCHHHHHHHH------HHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred ceEECCHHHHhcCCCCCEEEEcCCChHHHHHHH------HHHHHcCCcEEecCcccCHHHHHHHHHHHHHhCCeee
Confidence 457899999997 4899999999875322232 23455677666432 2223456778888888887763
No 191
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=89.02 E-value=0.83 Score=39.84 Aligned_cols=68 Identities=19% Similarity=0.132 Sum_probs=50.6
Q ss_pred ccccCCHHHHHhc--CCEEEEecCChHHHHHHhcCCCcccccCCCC-CEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEe
Q 025140 13 CRYQPSPDEVAAS--CDVTFAMLADPESAMDVACGKHGAASGMGPG-KGYVDVS-TVDGDTSKLINGHIKATGASFLEA 87 (257)
Q Consensus 13 a~~~~s~~ea~~~--advvi~~l~~~~~v~~v~~~~~~~~~~l~~g-~~ivd~S-T~~p~~~~~la~~~~~~G~~~vda 87 (257)
.+..+|..|++++ .|+|++|+|+....+-+. .+ +..| .++++.- +.+++.++++.+.++++|+.+.-+
T Consensus 74 ~~~~~~~~~ll~~~~vD~V~I~tp~~~H~~~~~----~a---l~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~v~ 145 (361)
T 3u3x_A 74 ARRIATAEEILEDENIGLIVSAAVSSERAELAI----RA---MQHGKDVLVDKPGMTSFDQLAKLRRVQAETGRIFSIL 145 (361)
T ss_dssp CCEESCHHHHHTCTTCCEEEECCCHHHHHHHHH----HH---HHTTCEEEEESCSCSSHHHHHHHHHHHHTTCCCEEEE
T ss_pred CcccCCHHHHhcCCCCCEEEEeCChHHHHHHHH----HH---HHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 5778999999975 899999999877665544 22 2334 4777764 788999999999998888765433
No 192
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=88.87 E-value=0.67 Score=39.93 Aligned_cols=73 Identities=10% Similarity=0.041 Sum_probs=54.6
Q ss_pred cCccccCCHHHHHhc---CCEEEEecCChHHHHHHhcCCCcccccCCCCC-EEEEcC-CCCHHHHHHHHHHHHHcCCcEE
Q 025140 11 SRCRYQPSPDEVAAS---CDVTFAMLADPESAMDVACGKHGAASGMGPGK-GYVDVS-TVDGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 11 ~Ga~~~~s~~ea~~~---advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~-~ivd~S-T~~p~~~~~la~~~~~~G~~~v 85 (257)
.|....+|..|++++ .|+|++|+|+....+-+. ..+..|+ ++++.- +.+++.++++.+.++++|..+.
T Consensus 64 ~g~~~~~~~~~ll~~~~~vD~V~i~tp~~~H~~~~~-------~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g~~~~ 136 (330)
T 4ew6_A 64 EGVNSYTTIEAMLDAEPSIDAVSLCMPPQYRYEAAY-------KALVAGKHVFLEKPPGATLSEVADLEALANKQGASLF 136 (330)
T ss_dssp TTSEEESSHHHHHHHCTTCCEEEECSCHHHHHHHHH-------HHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEE
T ss_pred cCCCccCCHHHHHhCCCCCCEEEEeCCcHHHHHHHH-------HHHHcCCcEEEeCCCCCCHHHHHHHHHHHHhcCCeEE
Confidence 477788999999876 899999999876655443 2233444 666653 6789999999999999998876
Q ss_pred EecCC
Q 025140 86 EAPVS 90 (257)
Q Consensus 86 dapV~ 90 (257)
-+...
T Consensus 137 v~~~~ 141 (330)
T 4ew6_A 137 ASWHS 141 (330)
T ss_dssp ECCGG
T ss_pred EEehh
Confidence 66543
No 193
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=88.41 E-value=0.49 Score=40.39 Aligned_cols=61 Identities=13% Similarity=0.080 Sum_probs=43.7
Q ss_pred cCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCC---CHHHHHHHHHHHHHcCCcE
Q 025140 16 QPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTV---DGDTSKLINGHIKATGASF 84 (257)
Q Consensus 16 ~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~---~p~~~~~la~~~~~~G~~~ 84 (257)
.+++.+. .++|+||+|+|+....+.+. ..+..|+-+|+.+.. +++..+++.+.+++.|..+
T Consensus 57 ~~~l~~~-~~~DvViiatp~~~h~~~~~-------~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g~~~ 120 (304)
T 3bio_A 57 VSDIEQL-ESVDVALVCSPSREVERTAL-------EILKKGICTADSFDIHDGILALRRSLGDAAGKSGAAA 120 (304)
T ss_dssp ESSGGGS-SSCCEEEECSCHHHHHHHHH-------HHHTTTCEEEECCCCGGGHHHHHHHHHHHHHHHTCEE
T ss_pred HHHHHhC-CCCCEEEECCCchhhHHHHH-------HHHHcCCeEEECCCCCCCCHHHHHHHHHHHHhCCCEE
Confidence 3455444 68999999999877765443 234568888887643 6778888988888888654
No 194
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=88.05 E-value=1.3 Score=38.26 Aligned_cols=72 Identities=14% Similarity=-0.025 Sum_probs=53.2
Q ss_pred Cc-cccCCHHHHHh--cCCEEEEecCChHHHHHHhcCCCcccccCCCCC-EEEEc-CCCCHHHHHHHHHHHHHcCCcEEE
Q 025140 12 RC-RYQPSPDEVAA--SCDVTFAMLADPESAMDVACGKHGAASGMGPGK-GYVDV-STVDGDTSKLINGHIKATGASFLE 86 (257)
Q Consensus 12 Ga-~~~~s~~ea~~--~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~-~ivd~-ST~~p~~~~~la~~~~~~G~~~vd 86 (257)
|. ...+|..|+++ +.|+|++|+|+....+-+. .+ +..|+ ++++. -+.++++++++.+.++++|+.+.-
T Consensus 66 ~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~----~a---l~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v 138 (340)
T 1zh8_A 66 GNPAVFDSYEELLESGLVDAVDLTLPVELNLPFIE----KA---LRKGVHVICEKPISTDVETGKKVVELSEKSEKTVYI 138 (340)
T ss_dssp SSCEEESCHHHHHHSSCCSEEEECCCGGGHHHHHH----HH---HHTTCEEEEESSSSSSHHHHHHHHHHHHHCSSCEEE
T ss_pred CCCcccCCHHHHhcCCCCCEEEEeCCchHHHHHHH----HH---HHCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 55 77899999997 5899999999987655443 12 23444 77776 367899999999999999887655
Q ss_pred ecCC
Q 025140 87 APVS 90 (257)
Q Consensus 87 apV~ 90 (257)
+-..
T Consensus 139 ~~~~ 142 (340)
T 1zh8_A 139 AENF 142 (340)
T ss_dssp ECGG
T ss_pred Eecc
Confidence 4433
No 195
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=88.00 E-value=0.15 Score=45.27 Aligned_cols=46 Identities=22% Similarity=0.319 Sum_probs=31.3
Q ss_pred CHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCC
Q 025140 18 SPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVST 64 (257)
Q Consensus 18 s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST 64 (257)
++.++++++|+||.++..+..-...+.. ++.++.+.+|.+|||++.
T Consensus 258 ~l~e~l~~aDIVI~tv~iPg~~ap~Lvt-~emv~~MkpGsVIVDvA~ 303 (381)
T 3p2y_A 258 ALEDAITKFDIVITTALVPGRPAPRLVT-AAAATGMQPGSVVVDLAG 303 (381)
T ss_dssp HHHHHHTTCSEEEECCCCTTSCCCCCBC-HHHHHTSCTTCEEEETTG
T ss_pred HHHHHHhcCCEEEECCCCCCcccceeec-HHHHhcCCCCcEEEEEeC
Confidence 5778999999999997443211111111 345677889999999984
No 196
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=87.85 E-value=0.45 Score=36.95 Aligned_cols=58 Identities=3% Similarity=-0.086 Sum_probs=37.6
Q ss_pred HhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEecC
Q 025140 23 AASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPV 89 (257)
Q Consensus 23 ~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vdapV 89 (257)
+.++|+||+|+++++....++. .+..+.+...+|. .+..++..+ .+++.|+.++..|.
T Consensus 103 ~~~ad~vi~~~~~~~~~~~~~~----~~~~~~~~~~ii~-~~~~~~~~~----~l~~~G~~~vi~p~ 160 (183)
T 3c85_A 103 TGHVKLVLLAMPHHQGNQTALE----QLQRRNYKGQIAA-IAEYPDQLE----GLLESGVDAAFNIY 160 (183)
T ss_dssp CCCCCEEEECCSSHHHHHHHHH----HHHHTTCCSEEEE-EESSHHHHH----HHHHHTCSEEEEHH
T ss_pred CCCCCEEEEeCCChHHHHHHHH----HHHHHCCCCEEEE-EECCHHHHH----HHHHcCCCEEEchH
Confidence 5679999999999887766652 2333333434433 345666543 45667999988863
No 197
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=87.62 E-value=0.21 Score=44.10 Aligned_cols=73 Identities=10% Similarity=0.127 Sum_probs=50.5
Q ss_pred cCccccCCHHHHHhcCCEEEEecCChHHH---HHHhcCCCcccccCCCCC-EEEEcCCCCHHHHHHHHHHHHHcCCcEEE
Q 025140 11 SRCRYQPSPDEVAASCDVTFAMLADPESA---MDVACGKHGAASGMGPGK-GYVDVSTVDGDTSKLINGHIKATGASFLE 86 (257)
Q Consensus 11 ~Ga~~~~s~~ea~~~advvi~~l~~~~~v---~~v~~~~~~~~~~l~~g~-~ivd~ST~~p~~~~~la~~~~~~G~~~vd 86 (257)
-|+...+|..|++++.|+|++|+|+.... .++. ...+..|+ ++++.= +++++++++.+.++++|+.|.-
T Consensus 52 ~gv~~~~~~~~l~~~~D~v~i~~p~~~h~~~~~~~a------~~al~aGkhVl~EKP-l~~~ea~~l~~~A~~~g~~~~v 124 (372)
T 4gmf_A 52 FGIPLYTSPEQITGMPDIACIVVRSTVAGGAGTQLA------RHFLARGVHVIQEHP-LHPDDISSLQTLAQEQGCCYWI 124 (372)
T ss_dssp TTCCEESSGGGCCSCCSEEEECCC--CTTSHHHHHH------HHHHHTTCEEEEESC-CCHHHHHHHHHHHHHHTCCEEE
T ss_pred hCCCEECCHHHHhcCCCEEEEECCCcccchhHHHHH------HHHHHcCCcEEEecC-CCHHHHHHHHHHHHHcCCEEEE
Confidence 48888899999999999999999986431 1111 11223444 555554 6899999999999999998865
Q ss_pred ecCC
Q 025140 87 APVS 90 (257)
Q Consensus 87 apV~ 90 (257)
+-..
T Consensus 125 ~~~y 128 (372)
T 4gmf_A 125 NTFY 128 (372)
T ss_dssp ECSG
T ss_pred cCcc
Confidence 5433
No 198
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=87.38 E-value=1.4 Score=37.52 Aligned_cols=69 Identities=12% Similarity=0.085 Sum_probs=47.8
Q ss_pred cCccccCCHHHHHh--c-CCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCC-CCHHHHHHHHHHHHHcCCcEE
Q 025140 11 SRCRYQPSPDEVAA--S-CDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVST-VDGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 11 ~Ga~~~~s~~ea~~--~-advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST-~~p~~~~~la~~~~~~G~~~v 85 (257)
.|....+|+.|+.+ . .|++|+++|.+...+ ++ +.+.+. .-+.+|-.|+ .+.+..+++.+.++++|++++
T Consensus 54 ~G~~vy~sl~el~~~~~~~DvaIi~vp~~~~~~-~v---~ea~~~--Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~vi 126 (297)
T 2yv2_A 54 HGVPVYDSVKEALAEHPEINTSIVFVPAPFAPD-AV---YEAVDA--GIRLVVVITEGIPVHDTMRFVNYARQKGATII 126 (297)
T ss_dssp TTEEEESSHHHHHHHCTTCCEEEECCCGGGHHH-HH---HHHHHT--TCSEEEECCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred CCEeeeCCHHHHhhcCCCCCEEEEecCHHHHHH-HH---HHHHHC--CCCEEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 48888899999987 5 999999999765544 33 233332 1233444454 555667888899999998766
No 199
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=87.36 E-value=1.2 Score=38.04 Aligned_cols=70 Identities=6% Similarity=-0.031 Sum_probs=52.8
Q ss_pred CccccCCHHHHH-----------hcCCEEEEecCChHHHHHHhcCCCcccccCCCC-CEEEEcC-CCCHHHHHHHHHHHH
Q 025140 12 RCRYQPSPDEVA-----------ASCDVTFAMLADPESAMDVACGKHGAASGMGPG-KGYVDVS-TVDGDTSKLINGHIK 78 (257)
Q Consensus 12 Ga~~~~s~~ea~-----------~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g-~~ivd~S-T~~p~~~~~la~~~~ 78 (257)
+++..+|..+++ .+.|+|++|.|+....+-+. .+ +..| .++++.- +.+++.++++.+.++
T Consensus 49 ~~~~~~~~~~ll~~~~~l~~~~~~~vD~V~I~tP~~~H~~~~~----~a---l~aGkhVl~EKPla~~~~ea~~l~~~a~ 121 (318)
T 3oa2_A 49 QSEFFTEFEFFLDHASNLKRDSATALDYVSICSPNYLHYPHIA----AG---LRLGCDVICEKPLVPTPEMLDQLAVIER 121 (318)
T ss_dssp TCEEESSHHHHHHHHHHHTTSTTTSCCEEEECSCGGGHHHHHH----HH---HHTTCEEEECSSCCSCHHHHHHHHHHHH
T ss_pred CCcEECCHHHHHHhhhhhhhccCCCCcEEEECCCcHHHHHHHH----HH---HHCCCeEEEECCCcCCHHHHHHHHHHHH
Confidence 677889999987 46899999999987765544 12 2234 4777764 789999999999999
Q ss_pred HcCCcEEEec
Q 025140 79 ATGASFLEAP 88 (257)
Q Consensus 79 ~~G~~~vdap 88 (257)
++|..+..+.
T Consensus 122 ~~g~~~~v~~ 131 (318)
T 3oa2_A 122 ETDKRLYNIL 131 (318)
T ss_dssp HHTCCEEECC
T ss_pred HhCCEEEEEE
Confidence 9888765444
No 200
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=86.51 E-value=1.4 Score=37.54 Aligned_cols=69 Identities=7% Similarity=0.053 Sum_probs=51.8
Q ss_pred CccccCCHHHHH----------hcCCEEEEecCChHHHHHHhcCCCcccccCCCCC-EEEEcC-CCCHHHHHHHHHHHHH
Q 025140 12 RCRYQPSPDEVA----------ASCDVTFAMLADPESAMDVACGKHGAASGMGPGK-GYVDVS-TVDGDTSKLINGHIKA 79 (257)
Q Consensus 12 Ga~~~~s~~ea~----------~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~-~ivd~S-T~~p~~~~~la~~~~~ 79 (257)
+.+...|..+++ .+.|+|++|.|+....+-+. . .+..|+ ++++.- +.+++.++++.+.+++
T Consensus 49 ~~~~~~~~~~ll~~~~~l~~~~~~vD~V~I~tP~~~H~~~~~----~---al~aGkhVl~EKPla~~~~ea~~l~~~a~~ 121 (312)
T 3o9z_A 49 EAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASPNHLHYPQIR----M---ALRLGANALSEKPLVLWPEEIARLKELEAR 121 (312)
T ss_dssp TCEEESCHHHHHHHHHHHHHTTCCCSEEEECSCGGGHHHHHH----H---HHHTTCEEEECSSSCSCHHHHHHHHHHHHH
T ss_pred CCceeCCHHHHHHHhhhhcccCCCCcEEEECCCchhhHHHHH----H---HHHCCCeEEEECCCCCCHHHHHHHHHHHHH
Confidence 667889999987 46899999999987765443 1 223444 666663 7889999999999999
Q ss_pred cCCcEEEe
Q 025140 80 TGASFLEA 87 (257)
Q Consensus 80 ~G~~~vda 87 (257)
+|..+.-+
T Consensus 122 ~g~~~~v~ 129 (312)
T 3o9z_A 122 TGRRVYTV 129 (312)
T ss_dssp HCCCEEEC
T ss_pred cCCEEEEE
Confidence 98876444
No 201
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=86.51 E-value=0.86 Score=39.12 Aligned_cols=64 Identities=17% Similarity=0.120 Sum_probs=43.1
Q ss_pred cCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCC--HHHH-HHHHHHHHHcC
Q 025140 11 SRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVD--GDTS-KLINGHIKATG 81 (257)
Q Consensus 11 ~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~--p~~~-~~la~~~~~~G 81 (257)
.|....++..+++.++|+||+|+|+....+.+. ..+..|+-+|+.++.. .+.. +++.+.+++.|
T Consensus 44 ~gv~~~~d~~~ll~~~DvViiatp~~~h~~~~~-------~al~aG~~Vv~ekp~~~~~~~~~~~l~~~a~~~~ 110 (320)
T 1f06_A 44 TPVFDVADVDKHADDVDVLFLCMGSATDIPEQA-------PKFAQFACTVDTYDNHRDIPRHRQVMNEAATAAG 110 (320)
T ss_dssp SCEEEGGGGGGTTTTCSEEEECSCTTTHHHHHH-------HHHTTTSEEECCCCCGGGHHHHHHHHHHHHHHHT
T ss_pred CCCceeCCHHHHhcCCCEEEEcCCcHHHHHHHH-------HHHHCCCEEEECCCCcCCHHHHHHHHHHHHHhCC
Confidence 355566788887788999999999876655554 2344577777776643 4444 66666665444
No 202
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=86.43 E-value=1.5 Score=31.80 Aligned_cols=57 Identities=16% Similarity=0.164 Sum_probs=35.6
Q ss_pred HhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEecC
Q 025140 23 AASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPV 89 (257)
Q Consensus 23 ~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vdapV 89 (257)
++++|+||+|++++.....+. .+...+.++++|+..++ ++.. +.+++.|+.++..|-
T Consensus 67 ~~~~d~vi~~~~~~~~~~~~~----~~~~~~~~~~ii~~~~~--~~~~----~~l~~~g~~~v~~p~ 123 (140)
T 1lss_A 67 IEDADMYIAVTGKEEVNLMSS----LLAKSYGINKTIARISE--IEYK----DVFERLGVDVVVSPE 123 (140)
T ss_dssp TTTCSEEEECCSCHHHHHHHH----HHHHHTTCCCEEEECSS--TTHH----HHHHHTTCSEEECHH
T ss_pred cccCCEEEEeeCCchHHHHHH----HHHHHcCCCEEEEEecC--HhHH----HHHHHcCCCEEECHH
Confidence 567999999999875543332 23333555677765443 3332 355668888887763
No 203
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=85.75 E-value=0.27 Score=44.94 Aligned_cols=61 Identities=10% Similarity=0.018 Sum_probs=44.5
Q ss_pred hhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHH-HHHHHHH
Q 025140 8 FYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGD-TSKLING 75 (257)
Q Consensus 8 ~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~-~~~~la~ 75 (257)
....|.+. .++.|++++||+|+++..+.. ++. ...++.+++|.++||.++..++ ....+.+
T Consensus 296 a~~~g~~~-~~l~ell~~aDiVi~~~~t~~----lI~--~~~l~~MK~gailiNvgrg~~EId~~aL~~ 357 (479)
T 1v8b_A 296 AVMEGFNV-VTLDEIVDKGDFFITCTGNVD----VIK--LEHLLKMKNNAVVGNIGHFDDEIQVNELFN 357 (479)
T ss_dssp HHTTTCEE-CCHHHHTTTCSEEEECCSSSS----SBC--HHHHTTCCTTCEEEECSSTTTSBCHHHHHT
T ss_pred HHHcCCEe-cCHHHHHhcCCEEEECCChhh----hcC--HHHHhhcCCCcEEEEeCCCCccccchhhhc
Confidence 34567654 589999999999999964432 221 1344668899999999999885 6667766
No 204
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=85.72 E-value=1.4 Score=38.83 Aligned_cols=74 Identities=9% Similarity=0.121 Sum_probs=50.4
Q ss_pred hhhhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEE
Q 025140 6 NAFYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 6 ~~~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~v 85 (257)
+++.+.|+++.++..|..+++|+|+..- .+-. . .+ . ...++.+++++.++-. ..+.......+.+.++|+..+
T Consensus 48 ~~y~~aGa~i~~~~~~~~~~adiil~v~-~p~~-~-~~-~-~~~i~~l~~~~~~i~~--~~~~~~~~~~~~~~~~gi~~~ 120 (384)
T 1l7d_A 48 DALTAAGATIASTAAQALSQADVVWKVQ-RPMT-A-EE-G-TDEVALIKEGAVLMCH--LGALTNRPVVEALTKRKITAY 120 (384)
T ss_dssp HHHHHTTCEEESSHHHHHSSCSEEEEEE-CCCC-G-GG-S-CCGGGGSCTTCEEEEE--CCGGGCHHHHHHHHHTTCEEE
T ss_pred HHHHHCCCEEecChhhhhcCCCEEEEec-Cccc-c-cC-C-HHHHHhhccCCEEEEE--ecccCCHHHHHHHHHCCCEEE
Confidence 5577789999999999999999987642 2200 0 00 1 2345567778888743 445555667778889999887
Q ss_pred E
Q 025140 86 E 86 (257)
Q Consensus 86 d 86 (257)
+
T Consensus 121 ~ 121 (384)
T 1l7d_A 121 A 121 (384)
T ss_dssp E
T ss_pred E
Confidence 5
No 205
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=85.49 E-value=1.4 Score=37.73 Aligned_cols=69 Identities=6% Similarity=-0.028 Sum_probs=48.8
Q ss_pred cCccccCCHHHHHh--cCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCC-CHHHHHHHHHHHHHc-CCcEE
Q 025140 11 SRCRYQPSPDEVAA--SCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTV-DGDTSKLINGHIKAT-GASFL 85 (257)
Q Consensus 11 ~Ga~~~~s~~ea~~--~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~-~p~~~~~la~~~~~~-G~~~v 85 (257)
.|.....|+.|+.+ ..|++++++|...+ .+++ +.+.+.- =+.+|..+.. +.+..+++.+.++++ |++++
T Consensus 55 ~G~~vy~sl~el~~~~~vD~avI~vP~~~~-~~~~---~e~i~~G--i~~iv~~t~G~~~~~~~~l~~~a~~~~gi~li 127 (305)
T 2fp4_A 55 LGLPVFNTVKEAKEQTGATASVIYVPPPFA-AAAI---NEAIDAE--VPLVVCITEGIPQQDMVRVKHRLLRQGKTRLI 127 (305)
T ss_dssp TTEEEESSHHHHHHHHCCCEEEECCCHHHH-HHHH---HHHHHTT--CSEEEECCCCCCHHHHHHHHHHHTTCSSCEEE
T ss_pred CCeeeechHHHhhhcCCCCEEEEecCHHHH-HHHH---HHHHHCC--CCEEEEECCCCChHHHHHHHHHHHhcCCcEEE
Confidence 57788899999998 89999999997544 4444 2333321 1455556654 445567888899998 98876
No 206
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=84.12 E-value=0.67 Score=41.87 Aligned_cols=53 Identities=13% Similarity=0.128 Sum_probs=41.0
Q ss_pred hhhhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcC
Q 025140 6 NAFYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVS 63 (257)
Q Consensus 6 ~~~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~S 63 (257)
+...+.|-++ .++.|+++.+|+|++.+||..+. +++ +.+.+.+.+|+++.=..
T Consensus 80 ~~A~~~Gf~v-~~~~eA~~~ADvV~~L~PD~~q~-~vy---~~I~p~lk~G~~L~faH 132 (491)
T 3ulk_A 80 RKATENGFKV-GTYEELIPQADLVINLTPDKQHS-DVV---RTVQPLMKDGAALGYSH 132 (491)
T ss_dssp HHHHHTTCEE-EEHHHHGGGCSEEEECSCGGGHH-HHH---HHHGGGSCTTCEEEESS
T ss_pred HHHHHCCCEe-cCHHHHHHhCCEEEEeCChhhHH-HHH---HHHHhhCCCCCEEEecC
Confidence 3456677764 57999999999999999987654 466 46889999999886433
No 207
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=84.09 E-value=0.58 Score=34.42 Aligned_cols=66 Identities=6% Similarity=-0.050 Sum_probs=44.9
Q ss_pred cCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEE
Q 025140 11 SRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE 86 (257)
Q Consensus 11 ~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vd 86 (257)
.|-+...|+.|+-. .|++++++|. +.+.+++ +++.+.-.+ .+|+...+. .+++.+.++++|++++.
T Consensus 45 ~G~~~y~sl~dlp~-vDlavi~~p~-~~v~~~v---~e~~~~g~k-~v~~~~G~~----~~e~~~~a~~~Girvv~ 110 (122)
T 3ff4_A 45 LGKTIINERPVIEG-VDTVTLYINP-QNQLSEY---NYILSLKPK-RVIFNPGTE----NEELEEILSENGIEPVI 110 (122)
T ss_dssp TTEECBCSCCCCTT-CCEEEECSCH-HHHGGGH---HHHHHHCCS-EEEECTTCC----CHHHHHHHHHTTCEEEE
T ss_pred CCeeccCChHHCCC-CCEEEEEeCH-HHHHHHH---HHHHhcCCC-EEEECCCCC----hHHHHHHHHHcCCeEEC
Confidence 46677888888888 9999999996 4444555 333332223 466554443 35788888999999883
No 208
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=82.95 E-value=2.6 Score=36.77 Aligned_cols=72 Identities=11% Similarity=0.088 Sum_probs=52.1
Q ss_pred cCc-cccCCHHHHHhc--CCEEEEecCChHHHHHHhcCCCcccccCCCCC-EEEEc-CCCCHHHHHHHHHHHHHcCCcEE
Q 025140 11 SRC-RYQPSPDEVAAS--CDVTFAMLADPESAMDVACGKHGAASGMGPGK-GYVDV-STVDGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 11 ~Ga-~~~~s~~ea~~~--advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~-~ivd~-ST~~p~~~~~la~~~~~~G~~~v 85 (257)
.|. +..+|..|++++ .|+|++|.|+....+-+. ..+..|+ ++++. -+.+++.++++.+.++++|+.+.
T Consensus 66 ~~~~~~~~~~~~ll~~~~iD~V~i~tp~~~h~~~~~-------~al~~Gk~V~~EKP~a~~~~~~~~l~~~a~~~~~~~~ 138 (383)
T 3oqb_A 66 FNIARWTTDLDAALADKNDTMFFDAATTQARPGLLT-------QAINAGKHVYCEKPIATNFEEALEVVKLANSKGVKHG 138 (383)
T ss_dssp TTCCCEESCHHHHHHCSSCCEEEECSCSSSSHHHHH-------HHHTTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEE
T ss_pred hCCCcccCCHHHHhcCCCCCEEEECCCchHHHHHHH-------HHHHCCCeEEEcCCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 466 467999999976 899999999866554433 2234455 55554 36789999999999999998765
Q ss_pred EecC
Q 025140 86 EAPV 89 (257)
Q Consensus 86 dapV 89 (257)
-+..
T Consensus 139 v~~~ 142 (383)
T 3oqb_A 139 TVQD 142 (383)
T ss_dssp ECCG
T ss_pred EEec
Confidence 5543
No 209
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=81.59 E-value=2.7 Score=36.35 Aligned_cols=69 Identities=10% Similarity=0.031 Sum_probs=51.7
Q ss_pred Cc-cccCCHHHHHhc--CCEEEEecCChHHHHHHhcCCCcccccCCCC-CEEEEcC-CCCHHHHHHHHHHHHHcCCcEEE
Q 025140 12 RC-RYQPSPDEVAAS--CDVTFAMLADPESAMDVACGKHGAASGMGPG-KGYVDVS-TVDGDTSKLINGHIKATGASFLE 86 (257)
Q Consensus 12 Ga-~~~~s~~ea~~~--advvi~~l~~~~~v~~v~~~~~~~~~~l~~g-~~ivd~S-T~~p~~~~~la~~~~~~G~~~vd 86 (257)
|. +..+|..|++++ .|+|++|+|+....+-+. .+ +..| .++++.= +.+.+++++|.+.++++|..+.-
T Consensus 78 g~~~~y~d~~ell~~~~iDaV~IatP~~~H~~~a~----~a---l~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~v 150 (393)
T 4fb5_A 78 GFEKATADWRALIADPEVDVVSVTTPNQFHAEMAI----AA---LEAGKHVWCEKPMAPAYADAERMLATAERSGKVAAL 150 (393)
T ss_dssp TCSEEESCHHHHHHCTTCCEEEECSCGGGHHHHHH----HH---HHTTCEEEECSCSCSSHHHHHHHHHHHHHSSSCEEE
T ss_pred CCCeecCCHHHHhcCCCCcEEEECCChHHHHHHHH----HH---HhcCCeEEEccCCcccHHHHHHhhhhHHhcCCcccc
Confidence 55 578999999964 799999999988766554 12 2334 4777764 78899999999999988876543
Q ss_pred e
Q 025140 87 A 87 (257)
Q Consensus 87 a 87 (257)
+
T Consensus 151 g 151 (393)
T 4fb5_A 151 G 151 (393)
T ss_dssp C
T ss_pred c
Confidence 3
No 210
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=81.26 E-value=1.8 Score=37.76 Aligned_cols=93 Identities=19% Similarity=0.188 Sum_probs=51.0
Q ss_pred CHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCC----HHHHHHHHHHHHH-cCC-cEEEecCCC
Q 025140 18 SPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVD----GDTSKLINGHIKA-TGA-SFLEAPVSG 91 (257)
Q Consensus 18 s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~----p~~~~~la~~~~~-~G~-~~vdapV~g 91 (257)
++.+..+++|+||+|+|+..+.+-+ .. + .|..|||.|+-. |+.- .+|... +-. .++.- +.|
T Consensus 71 ~~~~~~~~~Dvvf~alp~~~s~~~~----~~----~-~g~~VIDlSsdfRl~~~~~y---~~~y~~~h~~p~~~~~-~yg 137 (351)
T 1vkn_A 71 DPEKVSKNCDVLFTALPAGASYDLV----RE----L-KGVKIIDLGADFRFDDPGVY---REWYGKELSGYENIKR-VYG 137 (351)
T ss_dssp CHHHHHHHCSEEEECCSTTHHHHHH----TT----C-CSCEEEESSSTTTCSSHHHH---HHHHCCCCTTGGGCCE-EEC
T ss_pred CHHHhhcCCCEEEECCCcHHHHHHH----HH----h-CCCEEEECChhhhCCchhhh---hhhcCCCCCchhhcCC-ceE
Confidence 4666668899999999987765433 22 2 689999999852 3432 222211 111 11222 445
Q ss_pred ChHH----hhcCceEEEecCCh-hHHHHHHHHHHHhc
Q 025140 92 SKKP----AEDGQLIFLAAGDK-SLYNTVAPLLDIMG 123 (257)
Q Consensus 92 ~~~~----a~~g~l~i~~gg~~-~~~~~~~~ll~~~~ 123 (257)
-|+- ...+.+.---||.. ...-.+.|+++...
T Consensus 138 lPE~n~e~i~~a~iIANPgC~~t~~~laL~PL~~~~~ 174 (351)
T 1vkn_A 138 LPELHREEIKNAQVVGNPGCYPTSVILALAPALKHNL 174 (351)
T ss_dssp CHHHHHHHHTTCSEEECCCHHHHHHHHHHHHHHHTTC
T ss_pred CCccCHHHhccCCEEeCCChHHHHHHHHHHHHHHcCC
Confidence 4442 23344343345533 44456788887643
No 211
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=81.11 E-value=3.1 Score=35.65 Aligned_cols=64 Identities=6% Similarity=-0.075 Sum_probs=48.6
Q ss_pred ccccCCHHHHHhc--CCEEEEecCChHHHHHHhcCCCcccccCCCCC-EEEEcC-CCCHHHHHHHHHHHHHcCCc
Q 025140 13 CRYQPSPDEVAAS--CDVTFAMLADPESAMDVACGKHGAASGMGPGK-GYVDVS-TVDGDTSKLINGHIKATGAS 83 (257)
Q Consensus 13 a~~~~s~~ea~~~--advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~-~ivd~S-T~~p~~~~~la~~~~~~G~~ 83 (257)
.+..+|..|++++ .|+|++|.|+....+-+. ..+..|+ ++++.- +.++++++++.+.++++|..
T Consensus 53 ~~~~~~~~~ll~~~~vD~V~I~tp~~~H~~~~~-------~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~ 120 (337)
T 3ip3_A 53 PKKYNNWWEMLEKEKPDILVINTVFSLNGKILL-------EALERKIHAFVEKPIATTFEDLEKIRSVYQKVRNE 120 (337)
T ss_dssp CEECSSHHHHHHHHCCSEEEECSSHHHHHHHHH-------HHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTTT
T ss_pred CcccCCHHHHhcCCCCCEEEEeCCcchHHHHHH-------HHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCc
Confidence 5788999999975 899999999877655443 1223444 666653 67899999999999998875
No 212
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=81.04 E-value=3.4 Score=36.39 Aligned_cols=71 Identities=11% Similarity=0.083 Sum_probs=52.9
Q ss_pred Cc-cccCCHHHHHh--cCCEEEEecCChHHHHHHhcCCCcccccCCCC-CEEEEcC-CCCHHHHHHHHHHHHHcCCcEEE
Q 025140 12 RC-RYQPSPDEVAA--SCDVTFAMLADPESAMDVACGKHGAASGMGPG-KGYVDVS-TVDGDTSKLINGHIKATGASFLE 86 (257)
Q Consensus 12 Ga-~~~~s~~ea~~--~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g-~~ivd~S-T~~p~~~~~la~~~~~~G~~~vd 86 (257)
|. +..+|..|+++ +.|+|++|+|+....+-+. . .+..| .++++.= +.+.+++++|.+.++++|..+.-
T Consensus 80 ~~~~~y~d~~~ll~~~~vD~V~I~tp~~~H~~~~~----~---al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v 152 (412)
T 4gqa_A 80 GAEKAYGDWRELVNDPQVDVVDITSPNHLHYTMAM----A---AIAAGKHVYCEKPLAVNEQQAQEMAQAARRAGVKTMV 152 (412)
T ss_dssp TCSEEESSHHHHHHCTTCCEEEECSCGGGHHHHHH----H---HHHTTCEEEEESCSCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred CCCeEECCHHHHhcCCCCCEEEECCCcHHHHHHHH----H---HHHcCCCeEeecCCcCCHHHHHHHHHHHHHhCCeeee
Confidence 55 57799999996 4799999999987766554 1 22334 4677763 78899999999999999987654
Q ss_pred ecC
Q 025140 87 APV 89 (257)
Q Consensus 87 apV 89 (257)
+-.
T Consensus 153 ~~~ 155 (412)
T 4gqa_A 153 AFN 155 (412)
T ss_dssp ECG
T ss_pred ccc
Confidence 443
No 213
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=80.77 E-value=0.41 Score=43.86 Aligned_cols=62 Identities=11% Similarity=0.094 Sum_probs=43.5
Q ss_pred hhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHH-HHHHHHHHHH
Q 025140 9 YYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGD-TSKLINGHIK 78 (257)
Q Consensus 9 ~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~-~~~~la~~~~ 78 (257)
...|.+. .++.|++++||+|++++.+.. ++. ...++.+++|.++||.++..+. ....+ +.++
T Consensus 317 ~~~G~~~-~~l~ell~~aDiVi~~~~t~~----lI~--~~~l~~MK~gAilINvgrg~veID~~aL-~AL~ 379 (494)
T 3d64_A 317 AMEGYRV-VTMEYAADKADIFVTATGNYH----VIN--HDHMKAMRHNAIVCNIGHFDSEIDVAST-RQYQ 379 (494)
T ss_dssp HTTTCEE-CCHHHHTTTCSEEEECSSSSC----SBC--HHHHHHCCTTEEEEECSSSSCSBCCGGG-TTSE
T ss_pred HHcCCEe-CCHHHHHhcCCEEEECCCccc----ccC--HHHHhhCCCCcEEEEcCCCcchhchHHH-Hhhh
Confidence 3457664 589999999999999984432 221 1345678899999999998874 44455 4443
No 214
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=80.53 E-value=2.7 Score=31.08 Aligned_cols=42 Identities=17% Similarity=0.317 Sum_probs=31.5
Q ss_pred ccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCC
Q 025140 15 YQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVST 64 (257)
Q Consensus 15 ~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST 64 (257)
..+++.++++++|+||+|+|.+.. ++ . .+.+.+|.+++|.+.
T Consensus 70 ~~~~~~~~~~~~Divi~at~~~~~---~~---~--~~~l~~g~~vid~~~ 111 (144)
T 3oj0_A 70 LINDIDSLIKNNDVIITATSSKTP---IV---E--ERSLMPGKLFIDLGN 111 (144)
T ss_dssp ECSCHHHHHHTCSEEEECSCCSSC---SB---C--GGGCCTTCEEEECCS
T ss_pred eecCHHHHhcCCCEEEEeCCCCCc---Ee---e--HHHcCCCCEEEEccC
Confidence 567899999999999999998732 11 1 134567889999874
No 215
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=79.84 E-value=0.21 Score=42.17 Aligned_cols=59 Identities=12% Similarity=-0.027 Sum_probs=38.3
Q ss_pred cCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEe
Q 025140 25 SCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEA 87 (257)
Q Consensus 25 ~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vda 87 (257)
++|+||.|+|..-..+.. +..+++.+.+.++.+++|+++.+ .++ +.++++++|++.+|.
T Consensus 172 ~~DiVInaTp~Gm~~~~~-l~~~~l~~~l~~~~~v~D~vY~P--~T~-ll~~A~~~G~~~~~G 230 (269)
T 3phh_A 172 AFDLIINATSASLHNELP-LNKEVLKGYFKEGKLAYDLAYGF--LTP-FLSLAKELKTPFQDG 230 (269)
T ss_dssp CCSEEEECCTTCCCCSCS-SCHHHHHHHHHHCSEEEESCCSS--CCH-HHHHHHHTTCCEECS
T ss_pred cCCEEEEcccCCCCCCCC-CChHHHHhhCCCCCEEEEeCCCC--chH-HHHHHHHCcCEEECC
Confidence 899999998864221111 11122222355789999999985 443 788888999876654
No 216
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=79.79 E-value=8.8 Score=34.73 Aligned_cols=105 Identities=11% Similarity=0.211 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CCCHHHHHHHHhhcC-CCchhhhccccccccC-C---CCCCCc--
Q 025140 135 GAAMKLVVNMIMGSMMATFSEGLLHSEKV------GLDPNVLVEVVSQGA-ISAPMYSLKGPSMIES-L---YPTAFP-- 201 (257)
Q Consensus 135 a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~------Gld~~~~~~~l~~~~-~~s~~~~~~~~~~~~~-~---~~~~f~-- 201 (257)
...++-+.+.+.++.+...++.+.+.++. ++|...+..+.+.+- ..|.+++...+.+.+. + .-+-|.
T Consensus 323 ~~~~~~~~~al~~~~~~~yaqg~~~~~~a~~~~~w~l~~~~~a~~wr~gciir~~~l~~i~~a~~~~~~~~~l~~~~~~~ 402 (478)
T 1pgj_A 323 GPEIKQLYDSVCIAIISCYAQMFQCLREMDKVHNFGLNLPATIATFRAGCILQGYLLKPMTEAFEKNPNISNLMCAFQTE 402 (478)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHTTSSSSTTCBTTHHHHHHHHHHCTTCSCTTGGGHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHcCCceeeHHHHHHHHHHHhcCCChhhHHHHHHHH
Confidence 57788889999999999999999887764 789988988887765 5777776543322111 0 012332
Q ss_pred hhhHHHHHHHHHHH-HHhcCCCcHHHHHHHHHHHHHHHC
Q 025140 202 LKHQQKDLRLALGL-AESVSQSTPIAAAANELYKVAKSH 239 (257)
Q Consensus 202 ~~~~~KD~~~~~~~-a~~~g~~~p~~~~~~~~~~~a~~~ 239 (257)
+.......+.++.. +-..|+|+|.+..++..|+.-...
T Consensus 403 ~~~~~~~~r~~v~~~~~~~g~~~p~~~~~l~y~d~~~~~ 441 (478)
T 1pgj_A 403 IRAGLQNYRDMVALITSKLEVSIPVLSASLNYVTAMFTP 441 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHhccc
Confidence 33345678888888 999999999999999999876544
No 217
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=79.58 E-value=0.3 Score=41.37 Aligned_cols=63 Identities=13% Similarity=0.077 Sum_probs=39.9
Q ss_pred CHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCc-EEE
Q 025140 18 SPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGAS-FLE 86 (257)
Q Consensus 18 s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~-~vd 86 (257)
+..++..++|+||.|+|.....+...+. .+.+.++.+++|+++.+.. ++ +.++++++|+. .+|
T Consensus 180 ~~~~l~~~aDiIInaTp~gm~~~~~~l~----~~~l~~~~~V~DlvY~P~~-T~-ll~~A~~~G~~~~~~ 243 (281)
T 3o8q_A 180 AFEQLKQSYDVIINSTSASLDGELPAID----PVIFSSRSVCYDMMYGKGY-TV-FNQWARQHGCAQAID 243 (281)
T ss_dssp EGGGCCSCEEEEEECSCCCC----CSCC----GGGEEEEEEEEESCCCSSC-CH-HHHHHHHTTCSEEEC
T ss_pred eHHHhcCCCCEEEEcCcCCCCCCCCCCC----HHHhCcCCEEEEecCCCcc-CH-HHHHHHHCCCCEEEC
Confidence 4444447899999999987543322221 1234578999999998544 44 45778889986 554
No 218
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=79.05 E-value=2.5 Score=36.29 Aligned_cols=70 Identities=14% Similarity=0.052 Sum_probs=50.6
Q ss_pred Cc-cccCCHHHHHhc--CCEEEEecCChHHHHHHhcCCCcccccCCCC-CEEEEcC-CCCHHHHHHHHHHHHHcCCcEEE
Q 025140 12 RC-RYQPSPDEVAAS--CDVTFAMLADPESAMDVACGKHGAASGMGPG-KGYVDVS-TVDGDTSKLINGHIKATGASFLE 86 (257)
Q Consensus 12 Ga-~~~~s~~ea~~~--advvi~~l~~~~~v~~v~~~~~~~~~~l~~g-~~ivd~S-T~~p~~~~~la~~~~~~G~~~vd 86 (257)
|. +..+|..|++++ .|+|++|+|+....+-+. .+ +..| .++++.= +.+++++++|.+.+++.|..+.-
T Consensus 70 g~~~~y~d~~ell~~~~iDaV~I~tP~~~H~~~~~----~a---l~aGkhVl~EKPla~~~~ea~~l~~~a~~~~~~l~v 142 (350)
T 4had_A 70 SVPHAFGSYEEMLASDVIDAVYIPLPTSQHIEWSI----KA---ADAGKHVVCEKPLALKAGDIDAVIAARDRNKVVVTE 142 (350)
T ss_dssp TCSEEESSHHHHHHCSSCSEEEECSCGGGHHHHHH----HH---HHTTCEEEECSCCCSSGGGGHHHHHHHHHHTCCEEE
T ss_pred CCCeeeCCHHHHhcCCCCCEEEEeCCCchhHHHHH----HH---HhcCCEEEEeCCcccchhhHHHHHHHHHHcCCceeE
Confidence 65 567999999864 799999999987765554 12 2234 4666764 67888999999999888876644
Q ss_pred ec
Q 025140 87 AP 88 (257)
Q Consensus 87 ap 88 (257)
+-
T Consensus 143 ~~ 144 (350)
T 4had_A 143 AY 144 (350)
T ss_dssp CC
T ss_pred ee
Confidence 43
No 219
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=78.23 E-value=1.3 Score=37.91 Aligned_cols=51 Identities=18% Similarity=0.240 Sum_probs=36.4
Q ss_pred hhhhcCccc--cC----CHH--HHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCC
Q 025140 7 AFYYSRCRY--QP----SPD--EVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVD 66 (257)
Q Consensus 7 ~~~~~Ga~~--~~----s~~--ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~ 66 (257)
-|...|+++ +. ++. +.++++|+||.+++.+.-+. . +.+.+|.+|||.++..
T Consensus 184 lL~~~gAtVtv~~~~T~~l~l~~~~~~ADIVI~Avg~p~~I~------~---~~vk~GavVIDvgi~~ 242 (300)
T 4a26_A 184 LLMKENATVTIVHSGTSTEDMIDYLRTADIVIAAMGQPGYVK------G---EWIKEGAAVVDVGTTP 242 (300)
T ss_dssp HHHHTTCEEEEECTTSCHHHHHHHHHTCSEEEECSCCTTCBC------G---GGSCTTCEEEECCCEE
T ss_pred HHHHCCCeEEEEeCCCCCchhhhhhccCCEEEECCCCCCCCc------H---HhcCCCcEEEEEeccC
Confidence 456677753 33 377 99999999999999764221 1 2357899999998765
No 220
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=78.19 E-value=1 Score=40.56 Aligned_cols=53 Identities=6% Similarity=0.038 Sum_probs=38.2
Q ss_pred hhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHH
Q 025140 9 YYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGD 68 (257)
Q Consensus 9 ~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~ 68 (257)
...|.+. .++.|+++++|+|+++..+..- +. ...++.+++|.++||.+-..++
T Consensus 251 ~~~G~~~-~sL~eal~~ADVVilt~gt~~i----I~--~e~l~~MK~gAIVINvgRg~vE 303 (436)
T 3h9u_A 251 AMEGYQV-LLVEDVVEEAHIFVTTTGNDDI----IT--SEHFPRMRDDAIVCNIGHFDTE 303 (436)
T ss_dssp HHTTCEE-CCHHHHTTTCSEEEECSSCSCS----BC--TTTGGGCCTTEEEEECSSSGGG
T ss_pred HHhCCee-cCHHHHHhhCCEEEECCCCcCc----cC--HHHHhhcCCCcEEEEeCCCCCc
Confidence 3456654 4899999999999987655332 21 2456778999999999976553
No 221
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=77.15 E-value=1.1 Score=37.80 Aligned_cols=51 Identities=12% Similarity=0.127 Sum_probs=37.7
Q ss_pred hhhhcCccc------cCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCC
Q 025140 7 AFYYSRCRY------QPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVD 66 (257)
Q Consensus 7 ~~~~~Ga~~------~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~ 66 (257)
-|...|+++ ..++.+.++++|+||.+++.+.-+. . +.+.+|.+|||.++..
T Consensus 169 lL~~~gAtVtv~~~~t~~L~~~~~~ADIVI~Avg~p~~I~------~---~~vk~GavVIDvgi~~ 225 (276)
T 3ngx_A 169 MLLNRNYTVSVCHSKTKDIGSMTRSSKIVVVAVGRPGFLN------R---EMVTPGSVVIDVGINY 225 (276)
T ss_dssp HHHHTTCEEEEECTTCSCHHHHHHHSSEEEECSSCTTCBC------G---GGCCTTCEEEECCCEE
T ss_pred HHHHCCCeEEEEeCCcccHHHhhccCCEEEECCCCCcccc------H---hhccCCcEEEEeccCc
Confidence 355667753 4689999999999999999765221 1 2357899999998876
No 222
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=76.94 E-value=0.32 Score=40.98 Aligned_cols=62 Identities=10% Similarity=-0.024 Sum_probs=41.6
Q ss_pred HhcCCEEEEecCChHHHH---HHhcCCCccc-ccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEecCC
Q 025140 23 AASCDVTFAMLADPESAM---DVACGKHGAA-SGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVS 90 (257)
Q Consensus 23 ~~~advvi~~l~~~~~v~---~v~~~~~~~~-~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vdapV~ 90 (257)
..++|+||.|+|...... +.. .+. +.+.++.+++|+...+..+ .+.++++++|++++|+..+
T Consensus 173 ~~~~DivInaTp~gm~~~~~~~~~----~~~~~~l~~~~~v~DlvY~P~~T--~ll~~A~~~G~~~i~Gl~M 238 (271)
T 1npy_A 173 NQQADILVNVTSIGMKGGKEEMDL----AFPKAFIDNASVAFDVVAMPVET--PFIRYAQARGKQTISGAAV 238 (271)
T ss_dssp TCCCSEEEECSSTTCTTSTTTTSC----SSCHHHHHHCSEEEECCCSSSSC--HHHHHHHHTTCEEECHHHH
T ss_pred cccCCEEEECCCCCccCccccCCC----CCCHHHcCCCCEEEEeecCCCCC--HHHHHHHHCCCEEECCHHH
Confidence 467999999999754211 000 011 1234688999999855444 7788888999998877654
No 223
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=75.92 E-value=6.2 Score=33.95 Aligned_cols=69 Identities=7% Similarity=-0.015 Sum_probs=47.3
Q ss_pred Cc-cccCCHHHHHhc--CCEEEEecCChHHHHHHhcCCCcccccCCCC-CEEEEc-CCCCHHHHHHHHH---HHHHcCCc
Q 025140 12 RC-RYQPSPDEVAAS--CDVTFAMLADPESAMDVACGKHGAASGMGPG-KGYVDV-STVDGDTSKLING---HIKATGAS 83 (257)
Q Consensus 12 Ga-~~~~s~~ea~~~--advvi~~l~~~~~v~~v~~~~~~~~~~l~~g-~~ivd~-ST~~p~~~~~la~---~~~~~G~~ 83 (257)
|. +..+|..|++++ .|+|++|+|+....+-+. .. +..| .++++. =+.+.+++++|.+ ..++.|+.
T Consensus 59 g~~~~~~d~~~ll~~~~iDaV~I~tP~~~H~~~~~----~a---l~aGkhVl~EKPla~t~~ea~~l~~~~~~~~~~g~~ 131 (390)
T 4h3v_A 59 GWSTTETDWRTLLERDDVQLVDVCTPGDSHAEIAI----AA---LEAGKHVLCEKPLANTVAEAEAMAAAAAKAAAGGIR 131 (390)
T ss_dssp TCSEEESCHHHHTTCTTCSEEEECSCGGGHHHHHH----HH---HHTTCEEEEESSSCSSHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCcccCCHHHHhcCCCCCEEEEeCChHHHHHHHH----HH---HHcCCCceeecCcccchhHHHHHHHHHHHHHhcCCc
Confidence 54 567899999864 789999999987776554 12 2334 477776 3678889988844 45556765
Q ss_pred EEEe
Q 025140 84 FLEA 87 (257)
Q Consensus 84 ~vda 87 (257)
+.-+
T Consensus 132 ~~v~ 135 (390)
T 4h3v_A 132 SMVG 135 (390)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 5433
No 224
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=74.82 E-value=0.91 Score=39.60 Aligned_cols=70 Identities=13% Similarity=0.090 Sum_probs=44.9
Q ss_pred CCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEE-EecCCCChH
Q 025140 17 PSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL-EAPVSGSKK 94 (257)
Q Consensus 17 ~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~v-dapV~g~~~ 94 (257)
+++.++++++|+||.|+|..-.. .+. +.. +..|+-+||.|-..+ ..+++.+.+++.|+.++ ++.+.-|..
T Consensus 69 ~~l~~~~~~~DvVi~~~p~~~~~-~v~---~~~---~~~g~~yvD~s~~~~-~~~~l~~~a~~~g~~~i~~~G~~PG~~ 139 (365)
T 3abi_A 69 DKLVEVMKEFELVIGALPGFLGF-KSI---KAA---IKSKVDMVDVSFMPE-NPLELRDEAEKAQVTIVFDAGFAPGLS 139 (365)
T ss_dssp HHHHHHHTTCSEEEECCCGGGHH-HHH---HHH---HHHTCEEEECCCCSS-CGGGGHHHHHHTTCEEECCCBTTTBHH
T ss_pred HHHHHHHhCCCEEEEecCCcccc-hHH---HHH---HhcCcceEeeeccch-hhhhhhhhhccCCceeeecCCCCCchH
Confidence 45667889999999999975332 232 112 345778888775443 45677777777887654 555554444
No 225
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=73.44 E-value=4.4 Score=35.48 Aligned_cols=69 Identities=13% Similarity=0.156 Sum_probs=46.1
Q ss_pred hhhhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEE
Q 025140 6 NAFYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 6 ~~~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~v 85 (257)
+++.+.|+++.+++.|+.++||+| +.+..+.. +.+ ..+.+|++++-.+. +...+++-+.+.++|++.+
T Consensus 48 ~~y~~aGa~i~~~~~~~~~~adii-~~vk~p~~--------~e~-~~l~~~~~l~~~~~--~~~~~~~l~~l~~~gi~~i 115 (377)
T 2vhw_A 48 ADFKAAGAQLVGTADQVWADADLL-LKVKEPIA--------AEY-GRLRHGQILFTFLH--LAASRACTDALLDSGTTSI 115 (377)
T ss_dssp HHHHHHTCEEESCHHHHHHHCSEE-ECSSCCCG--------GGG-GGCCTTCEEEECCC--GGGCHHHHHHHHHHTCEEE
T ss_pred HHHHHCCCEEecCHHHHhccCCEE-EEeCCCCh--------HHH-hhcCCCCEEEEEec--ccCCHHHHHHHHHcCCeEE
Confidence 567788999999999999999977 45543321 122 23456777776654 2334566667777888887
Q ss_pred E
Q 025140 86 E 86 (257)
Q Consensus 86 d 86 (257)
+
T Consensus 116 a 116 (377)
T 2vhw_A 116 A 116 (377)
T ss_dssp E
T ss_pred E
Confidence 3
No 226
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=72.43 E-value=6.5 Score=38.30 Aligned_cols=71 Identities=4% Similarity=-0.066 Sum_probs=47.8
Q ss_pred cCccccCCHHHHHh---cCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEE
Q 025140 11 SRCRYQPSPDEVAA---SCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 11 ~Ga~~~~s~~ea~~---~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~v 85 (257)
.|.....|++|+.. +.|+.|+++|.+.....+. +..+...-..++|-.+-.+....+++.+.++++|.+++
T Consensus 548 ~Gvp~y~sv~ea~~~~p~~DlaVI~vP~~~v~~av~----ea~~~~Gvk~~Viis~Gf~e~~~~~l~~~A~~~g~rli 621 (829)
T 3pff_A 548 ILIPVFKNMADAMRKHPEVDVLINFASLRSAYDSTM----ETMNYAQIRTIAIIAEGIPEALTRKLIKKADQKGVTII 621 (829)
T ss_dssp EEEEEESSHHHHHHHCTTCCEEEECCCTTTHHHHHH----HHTTSTTCCEEEECCSCCCHHHHHHHHHHHHHHTCEEE
T ss_pred CCcccCCcHHHHhhccCCCcEEEEeCCHHHHHHHHH----HHHhhCCCCEEEEeCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 36677899999986 4899999999876655554 22221111234444555666666788888888998765
No 227
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=71.94 E-value=1.6 Score=37.76 Aligned_cols=119 Identities=13% Similarity=0.130 Sum_probs=71.1
Q ss_pred CHHHHHh--cCCEEEEecCCh---HHHHHHhcCCCcccccCCCCCEEEEcCCCCH-HHHHHHHHHHHHcCCcE-EEecCC
Q 025140 18 SPDEVAA--SCDVTFAMLADP---ESAMDVACGKHGAASGMGPGKGYVDVSTVDG-DTSKLINGHIKATGASF-LEAPVS 90 (257)
Q Consensus 18 s~~ea~~--~advvi~~l~~~---~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p-~~~~~la~~~~~~G~~~-vdapV~ 90 (257)
+..|.++ +.|+|+.|.|+. +...+.+ ...+..|+-||..+...- ...+++.+.++++|+.| .++.|.
T Consensus 73 d~~e~l~~~~iDvVVe~T~~~~~~~pa~~~~------~~aL~aGkhVVtaNK~~la~~~~eL~~lA~~~g~~~~~Ea~vg 146 (325)
T 3ing_A 73 SGPEDLMGEAADLLVDCTPASRDGVREYSLY------RMAFESGMNVVTANKSGLANKWHDIMDSANQNSKYIRYEATVA 146 (325)
T ss_dssp CSGGGGTTSCCSEEEECCCCCSSSHHHHHHH------HHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTCCEECGGGSS
T ss_pred CHHHHhcCCCCCEEEECCCCccccchHHHHH------HHHHHCCCeEEEcCchhHHHHHHHHHHHHHHcCCeEEEEeeec
Confidence 6667765 478999999874 2223333 234557888877665322 56778888888888875 355555
Q ss_pred CChHHhhcCceEEEecCChhHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHHHHHHH--HHHHHHHHHHHHHcCC
Q 025140 91 GSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSM--MATFSEGLLHSEKVGL 165 (257)
Q Consensus 91 g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~~~~~--~~~~~Ea~~la~~~Gl 165 (257)
++.+ ++..+++++ -+.++..+..+=+|. .|+++.-+ -..+.|++.-|++.|.
T Consensus 147 ~giP----------------ii~~l~~~l--~g~~I~~i~Gi~nGT-----~nyil~~m~~g~~f~~~l~~Aq~~Gy 200 (325)
T 3ing_A 147 GGVP----------------LFSVLDYSI--LPSKVKRFRGIVSST-----INYVIRNMANGRSLRDVVDDAIKKGI 200 (325)
T ss_dssp TTSC----------------CHHHHHHTC--TTCCEEEEEEECCHH-----HHHHHHHHHTTCCHHHHHHHHHHHTC
T ss_pred ccCH----------------HHHHHHHHh--hCCCeeEEEEEEEee-----eeEEeecccCCCCHHHHHHHHHHcCC
Confidence 4432 235566655 345676665533443 23333222 2357788888888775
No 228
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=71.58 E-value=1.5 Score=38.14 Aligned_cols=41 Identities=22% Similarity=0.131 Sum_probs=28.9
Q ss_pred CHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCC
Q 025140 18 SPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTV 65 (257)
Q Consensus 18 s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~ 65 (257)
++.+..+++|+||+|+|...+-+-+ ..+ +..|..+||.|+-
T Consensus 68 ~~~~~~~~~Dvvf~a~p~~~s~~~~----~~~---~~~g~~vIDlSa~ 108 (337)
T 3dr3_A 68 DISEFSPGVDVVFLATAHEVSHDLA----PQF---LEAGCVVFDLSGA 108 (337)
T ss_dssp SGGGTCTTCSEEEECSCHHHHHHHH----HHH---HHTTCEEEECSST
T ss_pred CHHHHhcCCCEEEECCChHHHHHHH----HHH---HHCCCEEEEcCCc
Confidence 4555558999999999986654333 122 3468899999986
No 229
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=70.80 E-value=25 Score=30.70 Aligned_cols=101 Identities=7% Similarity=-0.064 Sum_probs=62.8
Q ss_pred CCEEEEecCC--hHHHHHHhcCCCcccccCC-CCCEEEEcCC-CCHHHHHHHHHHHHH--cCCcEEEecCCCC-hHHh--
Q 025140 26 CDVTFAMLAD--PESAMDVACGKHGAASGMG-PGKGYVDVST-VDGDTSKLINGHIKA--TGASFLEAPVSGS-KKPA-- 96 (257)
Q Consensus 26 advvi~~l~~--~~~v~~v~~~~~~~~~~l~-~g~~ivd~ST-~~p~~~~~la~~~~~--~G~~~vdapV~g~-~~~a-- 96 (257)
-+.+=+-+.. .+...+++ +.+.+... .-.+.||... -+++++.++.+.+++ .++.|++-|+.-. ....
T Consensus 161 f~~vKik~g~~~~~~~~e~v---~avR~a~G~~~~l~vDan~~~~~~~a~~~~~~l~~~g~~i~~iEqP~~~~~~~~~~~ 237 (389)
T 2oz8_A 161 YSAFKIKVGHRDFDRDLRRL---ELLKTCVPAGSKVMIDPNEAWTSKEALTKLVAIREAGHDLLWVEDPILRHDHDGLRT 237 (389)
T ss_dssp CCEEEEECCCSSHHHHHHHH---HHHHTTSCTTCEEEEECTTCBCHHHHHHHHHHHHHTTCCCSEEESCBCTTCHHHHHH
T ss_pred CCEEEEccCCCCHHHHHHHH---HHHHHhhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCceEEeCCCCCcCHHHHHH
Confidence 3555554442 23333333 23334442 3468889864 578999999999999 8899999998532 1111
Q ss_pred --hcC-ceEEEecCChhHHHHHHHHHHHhcCCceecC
Q 025140 97 --EDG-QLIFLAAGDKSLYNTVAPLLDIMGKSRFYLG 130 (257)
Q Consensus 97 --~~g-~l~i~~gg~~~~~~~~~~ll~~~~~~~~~~G 130 (257)
..- ..+|+.++.- ..+.++++++.=.-+++.+.
T Consensus 238 l~~~~~~iPIa~dE~~-~~~~~~~~i~~~~~d~v~ik 273 (389)
T 2oz8_A 238 LRHAVTWTQINSGEYL-DLQGKRLLLEAHAADILNVH 273 (389)
T ss_dssp HHHHCCSSEEEECTTC-CHHHHHHHHHTTCCSEEEEC
T ss_pred HHhhCCCCCEEeCCCC-CHHHHHHHHHcCCCCEEEEC
Confidence 122 4677777766 66778888876555666664
No 230
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=70.43 E-value=7.4 Score=34.14 Aligned_cols=37 Identities=11% Similarity=0.101 Sum_probs=24.8
Q ss_pred HHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCC--CEEEEcCC
Q 025140 21 EVAASCDVTFAMLADPESAMDVACGKHGAASGMGPG--KGYVDVST 64 (257)
Q Consensus 21 ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g--~~ivd~ST 64 (257)
+..+++|+||.|+|...+-+-+ ..+. ..| ++|||.|+
T Consensus 60 ~~~~~~Dvvf~a~~~~~s~~~~----~~~~---~~G~k~~VID~ss 98 (370)
T 3pzr_A 60 ESLKQLDAVITCQGGSYTEKVY----PALR---QAGWKGYWIDAAS 98 (370)
T ss_dssp HHHTTCSEEEECSCHHHHHHHH----HHHH---HTTCCCEEEECSS
T ss_pred hHhccCCEEEECCChHHHHHHH----HHHH---HCCCCEEEEeCCc
Confidence 3458999999999976554322 1222 245 58999997
No 231
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=69.95 E-value=4.7 Score=33.49 Aligned_cols=66 Identities=14% Similarity=0.097 Sum_probs=50.0
Q ss_pred CccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCC---CHHHHHHHHHHHHHcCCcE
Q 025140 12 RCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTV---DGDTSKLINGHIKATGASF 84 (257)
Q Consensus 12 Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~---~p~~~~~la~~~~~~G~~~ 84 (257)
|...++++.++++++|+|+-|-+ .+++++.. . .-|..|+-+|-+|.. +++..+++.+.+++.|.++
T Consensus 47 gv~a~~d~d~lla~pD~VVe~A~-~~av~e~~---~---~iL~aG~dvv~~S~gaLad~~l~~~L~~aA~~gg~~l 115 (253)
T 1j5p_A 47 PGVVRLDEFQVPSDVSTVVECAS-PEAVKEYS---L---QILKNPVNYIIISTSAFADEVFRERFFSELKNSPARV 115 (253)
T ss_dssp SSSEECSSCCCCTTCCEEEECSC-HHHHHHHH---H---HHTTSSSEEEECCGGGGGSHHHHHHHHHHHHTCSCEE
T ss_pred CceeeCCHHHHhhCCCEEEECCC-HHHHHHHH---H---HHHHCCCCEEEcChhhhcCHHHHHHHHHHHHHCCCeE
Confidence 66778889998889999988875 56777643 2 345688989888875 6777778888888777764
No 232
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=69.86 E-value=4 Score=35.37 Aligned_cols=51 Identities=8% Similarity=-0.044 Sum_probs=34.1
Q ss_pred hhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCC
Q 025140 8 FYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTV 65 (257)
Q Consensus 8 ~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~ 65 (257)
+...|....+++.++.+++|+||.|.|.....+..- . .+..|..+|+.|.-
T Consensus 60 ~~~~~v~v~~~~e~l~~~vDvV~~aTp~~~s~~~a~----~---~~~aG~kvV~~sa~ 110 (340)
T 1b7g_O 60 FEESGIPVAGTVEDLIKTSDIVVDTTPNGVGAQYKP----I---YLQLQRNAIFQGGE 110 (340)
T ss_dssp HHTTTCCCCCCHHHHHHHCSEEEECCSTTHHHHHHH----H---HHHTTCEEEECTTS
T ss_pred hcccccccccCHhHhhcCCCEEEECCCCchhHHHHH----H---HHHcCCeEEEeCCC
Confidence 445566677788888788999999999876543221 1 12346667777755
No 233
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=69.69 E-value=5.1 Score=33.88 Aligned_cols=53 Identities=13% Similarity=-0.043 Sum_probs=34.1
Q ss_pred cCCHHHHHhcCCEEEEecCChHH-------------------HHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHH
Q 025140 16 QPSPDEVAASCDVTFAMLADPES-------------------AMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLIN 74 (257)
Q Consensus 16 ~~s~~ea~~~advvi~~l~~~~~-------------------v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la 74 (257)
..++ +++++||+||++++.+.. +++++ +.+.+.. +..++|. .|.+.+....+.
T Consensus 61 ~~d~-~~~~~aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~---~~i~~~~-~~~~ii~-~tNp~~~~~~~~ 132 (309)
T 1hyh_A 61 INDW-AALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVG---TNLKESG-FHGVLVV-ISNPVDVITALF 132 (309)
T ss_dssp ESCG-GGGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHH---HHHHHTT-CCSEEEE-CSSSHHHHHHHH
T ss_pred eCCH-HHhCCCCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHH---HHHHHHC-CCcEEEE-EcCcHHHHHHHH
Confidence 4667 888999999999998663 45555 3444433 4556665 566666543333
No 234
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=69.66 E-value=4.5 Score=36.62 Aligned_cols=63 Identities=16% Similarity=0.218 Sum_probs=44.5
Q ss_pred CHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEec
Q 025140 18 SPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAP 88 (257)
Q Consensus 18 s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vdap 88 (257)
++.++++++|+||.|+|..... .+. +. .+..|..++|.+...|.. ..+.+.+++.|+.++++-
T Consensus 81 ~l~~~l~~~DvVIn~tp~~~~~-~v~---~a---~l~~g~~vvd~~~~~p~~-~~Ll~~Ak~aGv~~i~g~ 143 (467)
T 2axq_A 81 ALDKVLADNDVVISLIPYTFHP-NVV---KS---AIRTKTDVVTSSYISPAL-RELEPEIVKAGITVMNEI 143 (467)
T ss_dssp HHHHHHHTSSEEEECSCGGGHH-HHH---HH---HHHHTCEEEECSCCCHHH-HHHHHHHHHHTCEEECSC
T ss_pred HHHHHHcCCCEEEECCchhhhH-HHH---HH---HHhcCCEEEEeecCCHHH-HHHHHHHHHcCCEEEecC
Confidence 4567788999999999975332 222 11 234678899998877875 567778888898877654
No 235
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=68.99 E-value=3.6 Score=35.50 Aligned_cols=119 Identities=18% Similarity=0.158 Sum_probs=71.1
Q ss_pred CHHHHHhc--CCEEEEecCChHH---HHHHhcCCCcccccCCCCCEEEEcCCCCHH-HHHHHHHHHHHcCCcEE-EecCC
Q 025140 18 SPDEVAAS--CDVTFAMLADPES---AMDVACGKHGAASGMGPGKGYVDVSTVDGD-TSKLINGHIKATGASFL-EAPVS 90 (257)
Q Consensus 18 s~~ea~~~--advvi~~l~~~~~---v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~-~~~~la~~~~~~G~~~v-dapV~ 90 (257)
|+.+++++ .|+|+.|.|+... ..+.+ ...+..|+-||-.+.-+.. ..+++.+.++++|+.|+ ++-|.
T Consensus 71 d~~~ll~~~~iDvVv~~tp~~~h~~~a~~~~------~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~g~~~~~ea~v~ 144 (327)
T 3do5_A 71 KAIEVVRSADYDVLIEASVTRVDGGEGVNYI------REALKRGKHVVTSNKGPLVAEFHGLMSLAERNGVRLMYEATVG 144 (327)
T ss_dssp CHHHHHHHSCCSEEEECCCCC----CHHHHH------HHHHTTTCEEEECCSHHHHHHHHHHHHHHHHTTCCEECGGGSS
T ss_pred CHHHHhcCCCCCEEEECCCCcccchhHHHHH------HHHHHCCCeEEecCchhhHHHHHHHHHHHHhhCCcEEEEEEee
Confidence 99999864 8999999998643 12222 2445678877777554332 56788888888898764 55555
Q ss_pred CChHHhhcCceEEEecCChhHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHHHHHHH---HHHHHHHHHHHHHcCC
Q 025140 91 GSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSM---MATFSEGLLHSEKVGL 165 (257)
Q Consensus 91 g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~~~~~---~~~~~Ea~~la~~~Gl 165 (257)
++. ..+..++.++ -+.++..+..+=+|. .|+++.-+ -..+.|++.-|++.|.
T Consensus 145 ~g~----------------Pii~~l~~~l--~~~~I~~I~GIlnGT-----~nyilt~m~~~g~~f~~~l~~Aq~~Gy 199 (327)
T 3do5_A 145 GAM----------------PVVKLAKRYL--ALCEIESVKGIFNGT-----CNYILSRMEEERLPYEHILKEAQELGY 199 (327)
T ss_dssp TTS----------------CCHHHHHTTT--TTSCEEEEEEECCHH-----HHHHHHHHHHHCCCHHHHHHHHHHTTS
T ss_pred ecC----------------HHHHHHHHHh--hCCCccEEEEEECCC-----cCcchhhcCcCCcCHHHHHHHHHHcCC
Confidence 442 2345566655 245565554422333 23332221 2357778888888775
No 236
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=67.39 E-value=3 Score=37.64 Aligned_cols=77 Identities=19% Similarity=0.280 Sum_probs=51.3
Q ss_pred cCccccCCHHHHHh--cCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCC-CCHHHHHHHHHHHHHcCCcE-EE
Q 025140 11 SRCRYQPSPDEVAA--SCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVST-VDGDTSKLINGHIKATGASF-LE 86 (257)
Q Consensus 11 ~Ga~~~~s~~ea~~--~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST-~~p~~~~~la~~~~~~G~~~-vd 86 (257)
.+..+.+++.|+++ +.|+|+.|.|+.+.-.+.. ...+..|+-||-... ......+++.+.++++|+.+ .+
T Consensus 62 ~~~~~~~d~~ell~d~diDvVve~tp~~~~h~~~~------~~AL~aGKhVvtenkal~a~~~~eL~~~A~~~gv~l~~E 135 (444)
T 3mtj_A 62 GGLPLTTNPFDVVDDPEIDIVVELIGGLEPARELV------MQAIANGKHVVTANKHLVAKYGNEIFAAAQAKGVMVTFE 135 (444)
T ss_dssp TTCCEESCTHHHHTCTTCCEEEECCCSSTTHHHHH------HHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCCEECG
T ss_pred ccCcccCCHHHHhcCCCCCEEEEcCCCchHHHHHH------HHHHHcCCEEEECCcccCHHHHHHHHHHHHHhCCeEEEE
Confidence 36678899999997 4799999999733222222 133456776664433 23456678888888999987 46
Q ss_pred ecCCCCh
Q 025140 87 APVSGSK 93 (257)
Q Consensus 87 apV~g~~ 93 (257)
+.|.++-
T Consensus 136 a~V~~gi 142 (444)
T 3mtj_A 136 AAVAGGI 142 (444)
T ss_dssp GGSSTTS
T ss_pred EeeeCCh
Confidence 7676653
No 237
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=67.19 E-value=2.6 Score=34.92 Aligned_cols=89 Identities=11% Similarity=0.061 Sum_probs=50.1
Q ss_pred cccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCc-EEEecCCCC
Q 025140 14 RYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGAS-FLEAPVSGS 92 (257)
Q Consensus 14 ~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~-~vdapV~g~ 92 (257)
...+++.++++++|+||.|+|..-.-...... .+.+.++++++|+... + -.+.++++++|++ .+| |.
T Consensus 155 ~~~~~~~~~~~~aDiVInatp~gm~p~~~~i~----~~~l~~~~~V~Divy~-~---T~ll~~A~~~G~~~~~~----Gl 222 (253)
T 3u62_A 155 FSLDQLDEVVKKAKSLFNTTSVGMKGEELPVS----DDSLKNLSLVYDVIYF-D---TPLVVKARKLGVKHIIK----GN 222 (253)
T ss_dssp EEGGGHHHHHHTCSEEEECSSTTTTSCCCSCC----HHHHTTCSEEEECSSS-C---CHHHHHHHHHTCSEEEC----TH
T ss_pred CCHHHHHhhhcCCCEEEECCCCCCCCCCCCCC----HHHhCcCCEEEEeeCC-C---cHHHHHHHHCCCcEEEC----CH
Confidence 34567888899999999999752110000000 1224688999999988 2 2455566677866 433 22
Q ss_pred hHHhhcC--ceEEEecCChhHHHH
Q 025140 93 KKPAEDG--QLIFLAAGDKSLYNT 114 (257)
Q Consensus 93 ~~~a~~g--~l~i~~gg~~~~~~~ 114 (257)
+-...++ ...+|.|-+++.+++
T Consensus 223 ~MLv~Qa~~af~~wtg~~~~~~~~ 246 (253)
T 3u62_A 223 LMFYYQAMENLKIWGIYDEEVFKE 246 (253)
T ss_dssp HHHHHHHHHHHHHTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHH
Confidence 3222222 224455655555443
No 238
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=67.03 E-value=9.6 Score=33.51 Aligned_cols=37 Identities=16% Similarity=0.234 Sum_probs=24.8
Q ss_pred HHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCC--CEEEEcCC
Q 025140 21 EVAASCDVTFAMLADPESAMDVACGKHGAASGMGPG--KGYVDVST 64 (257)
Q Consensus 21 ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g--~~ivd~ST 64 (257)
+..+++|+||.|+|...+-+ .. ..+. ..| ++|||.|+
T Consensus 64 ~~~~~vDvvf~a~~~~~s~~-~~---~~~~---~~G~k~~VID~ss 102 (377)
T 3uw3_A 64 DDLKKCDVIITCQGGDYTND-VF---PKLR---AAGWNGYWIDAAS 102 (377)
T ss_dssp HHHHTCSEEEECSCHHHHHH-HH---HHHH---HTTCCSEEEECSS
T ss_pred hHhcCCCEEEECCChHHHHH-HH---HHHH---HCCCCEEEEeCCc
Confidence 34579999999999765543 22 1222 345 48999997
No 239
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=66.89 E-value=7.5 Score=32.95 Aligned_cols=56 Identities=11% Similarity=-0.000 Sum_probs=34.3
Q ss_pred ccCCHHHHHhcCCEEEEecCChH---------------HHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHH
Q 025140 15 YQPSPDEVAASCDVTFAMLADPE---------------SAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGH 76 (257)
Q Consensus 15 ~~~s~~ea~~~advvi~~l~~~~---------------~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~ 76 (257)
...+..+ +++||+||++++.+. .++++. +.+.+.. +..++|.. |++++....+..+
T Consensus 60 ~t~d~~~-l~~aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~---~~i~~~~-~~~~viv~-tNP~~~~~~~~~~ 130 (310)
T 1guz_A 60 GSNDYAD-TANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVT---DNIMKHS-KNPIIIVV-SNPLDIMTHVAWV 130 (310)
T ss_dssp EESCGGG-GTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHH---HHHHHHC-SSCEEEEC-CSSHHHHHHHHHH
T ss_pred ECCCHHH-HCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHH---HHHHHhC-CCcEEEEE-cCchHHHHHHHHH
Confidence 3467766 899999999997641 123333 3344443 55555555 7788776555443
No 240
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=65.92 E-value=28 Score=30.73 Aligned_cols=71 Identities=13% Similarity=0.030 Sum_probs=47.7
Q ss_pred CCEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEecCCCCh-HHh----hcCceEEEecCChhHHHHHHHHHHHhcCCc
Q 025140 56 GKGYVDVS-TVDGDTSKLINGHIKATGASFLEAPVSGSK-KPA----EDGQLIFLAAGDKSLYNTVAPLLDIMGKSR 126 (257)
Q Consensus 56 g~~ivd~S-T~~p~~~~~la~~~~~~G~~~vdapV~g~~-~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~ 126 (257)
-.+.||.. .-+++++.++++.+++.|+.|++-|+...- ... +.-..+|+.++.-.....++++++.=.-.+
T Consensus 231 ~~L~vDaN~~~~~~~Ai~~~~~Le~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~li~~~a~D~ 307 (412)
T 3stp_A 231 NDLMLECYMGWNLDYAKRMLPKLAPYEPRWLEEPVIADDVAGYAELNAMNIVPISGGEHEFSVIGCAELINRKAVSV 307 (412)
T ss_dssp SEEEEECTTCSCHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSE
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCCCcccHHHHHHHHhCCCCCEEeCCCCCCHHHHHHHHHcCCCCE
Confidence 36888986 467899999999999999999999986321 111 222346666665555566677766433333
No 241
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=63.95 E-value=25 Score=30.49 Aligned_cols=72 Identities=7% Similarity=0.050 Sum_probs=47.1
Q ss_pred CCEEEEcCC-CCHHHHHHHHHHHHHcCCcEEEecCCCCh-HHh----hcCceEEEecCChhH-HHHHHHHHHHhcCCce
Q 025140 56 GKGYVDVST-VDGDTSKLINGHIKATGASFLEAPVSGSK-KPA----EDGQLIFLAAGDKSL-YNTVAPLLDIMGKSRF 127 (257)
Q Consensus 56 g~~ivd~ST-~~p~~~~~la~~~~~~G~~~vdapV~g~~-~~a----~~g~l~i~~gg~~~~-~~~~~~ll~~~~~~~~ 127 (257)
-.+.||... -+++++.++++.+++.|+.|++-|+.-.- ... +.-..+|+.++.-.. .+.++++++.=+-+++
T Consensus 201 ~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~i~~~~~d~v 279 (382)
T 1rvk_A 201 IRLMIDAFHWYSRTDALALGRGLEKLGFDWIEEPMDEQSLSSYKWLSDNLDIPVVGPESAAGKHWHRAEWIKAGACDIL 279 (382)
T ss_dssp SEEEEECCTTCCHHHHHHHHHHHHTTTCSEEECCSCTTCHHHHHHHHHHCSSCEEECSSCSSHHHHHHHHHHTTCCSEE
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHhcCCCEEeCCCChhhHHHHHHHHhhCCCCEEEeCCccCcHHHHHHHHHcCCCCEE
Confidence 457888863 57899999999999999999999985321 111 122346666655444 5667777665444433
No 242
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=63.89 E-value=7 Score=34.74 Aligned_cols=72 Identities=13% Similarity=0.188 Sum_probs=48.5
Q ss_pred chhhhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcE
Q 025140 5 NNAFYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASF 84 (257)
Q Consensus 5 ~~~~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ 84 (257)
.+++.+.||++ +.+|+..+||+|+- |.-|.. ++ .+.+++|++++-..-.. ..+++.+.+.++|+..
T Consensus 72 D~~Y~~aGa~i--~~~~~~~~adiIlk-Vk~p~~--------~e-~~~l~~g~~l~~~lh~~--~~~~l~~~l~~~~it~ 137 (405)
T 4dio_A 72 DQEYEKAGARV--GTAADAKTADVILK-VRRPSA--------QE-ISGYRSGAVVIAIMDPY--GNEEAISAMAGAGLTT 137 (405)
T ss_dssp HHHHHHTTCEE--ECGGGGGGCSEEEE-EECCCT--------TT-GGGSCTTCEEEEECCCT--TCHHHHHHHHHTTCEE
T ss_pred HHHHHHcCCEE--chHHhhccCCEEEE-eCCCCh--------hH-HhhcCCCcEEEEEeccc--cCHHHHHHHHHCCCeE
Confidence 35688899998 66788888998754 332221 11 34578899988765433 3567777788899888
Q ss_pred EEecCC
Q 025140 85 LEAPVS 90 (257)
Q Consensus 85 vdapV~ 90 (257)
++--..
T Consensus 138 ia~E~i 143 (405)
T 4dio_A 138 FAMELM 143 (405)
T ss_dssp EEGGGS
T ss_pred EEeecc
Confidence 766443
No 243
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=63.45 E-value=3.9 Score=34.88 Aligned_cols=51 Identities=16% Similarity=0.162 Sum_probs=36.9
Q ss_pred hhhcCccc------cCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCH
Q 025140 8 FYYSRCRY------QPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDG 67 (257)
Q Consensus 8 ~~~~Ga~~------~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p 67 (257)
|...|+++ ..++.+.++++|+||.+++.+.- +. .+ .+.+|.+|||.+....
T Consensus 185 L~~~gAtVtv~hs~t~~L~~~~~~ADIVI~Avg~p~~----I~--~~---~vk~GavVIDVgi~~~ 241 (301)
T 1a4i_A 185 LLWNNATVTTCHSKTAHLDEEVNKGDILVVATGQPEM----VK--GE---WIKPGAIVIDCGINYV 241 (301)
T ss_dssp HHHTTCEEEEECTTCSSHHHHHTTCSEEEECCCCTTC----BC--GG---GSCTTCEEEECCCBC-
T ss_pred HHhCCCeEEEEECCcccHHHHhccCCEEEECCCCccc----CC--HH---HcCCCcEEEEccCCCc
Confidence 55567653 46788999999999999998662 21 11 2468999999998654
No 244
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=63.13 E-value=4 Score=34.32 Aligned_cols=65 Identities=18% Similarity=0.071 Sum_probs=41.9
Q ss_pred CCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEE
Q 025140 17 PSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE 86 (257)
Q Consensus 17 ~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vd 86 (257)
+++.+.++++|+||.+.|-.-.-.. +..=-.+.+.++.+++|+.-.+..| .+.++++++|++.+|
T Consensus 186 ~~l~~~l~~~DiVInaTp~Gm~~~~---~~pi~~~~l~~~~~v~DlvY~P~~T--~ll~~A~~~G~~~~~ 250 (283)
T 3jyo_A 186 RGIEDVIAAADGVVNATPMGMPAHP---GTAFDVSCLTKDHWVGDVVYMPIET--ELLKAARALGCETLD 250 (283)
T ss_dssp TTHHHHHHHSSEEEECSSTTSTTSC---SCSSCGGGCCTTCEEEECCCSSSSC--HHHHHHHHHTCCEEC
T ss_pred HHHHHHHhcCCEEEECCCCCCCCCC---CCCCCHHHhCCCCEEEEecCCCCCC--HHHHHHHHCcCeEeC
Confidence 3788888999999999884321000 0000013356789999999876555 455667778887654
No 245
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=62.61 E-value=4.1 Score=34.44 Aligned_cols=51 Identities=10% Similarity=0.148 Sum_probs=35.6
Q ss_pred hhhhcCccc------cCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCC
Q 025140 7 AFYYSRCRY------QPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVD 66 (257)
Q Consensus 7 ~~~~~Ga~~------~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~ 66 (257)
-|...|+++ ..++.+.++++|+||.+++.+.-+. . +.+.+|.+|||.+...
T Consensus 180 lL~~~gAtVtv~hs~t~~L~~~~~~ADIVI~Avg~p~~I~------~---~~vk~GavVIDvgi~~ 236 (285)
T 3l07_A 180 LLLNAKATVTTCHRFTTDLKSHTTKADILIVAVGKPNFIT------A---DMVKEGAVVIDVGINH 236 (285)
T ss_dssp HHHHTTCEEEEECTTCSSHHHHHTTCSEEEECCCCTTCBC------G---GGSCTTCEEEECCCEE
T ss_pred HHHHCCCeEEEEeCCchhHHHhcccCCEEEECCCCCCCCC------H---HHcCCCcEEEEecccC
Confidence 355567642 4578999999999999998654211 1 2346888988887654
No 246
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=62.32 E-value=4.6 Score=34.14 Aligned_cols=51 Identities=12% Similarity=0.164 Sum_probs=36.8
Q ss_pred hhhhcCccc------cCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCC
Q 025140 7 AFYYSRCRY------QPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVD 66 (257)
Q Consensus 7 ~~~~~Ga~~------~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~ 66 (257)
-|...||++ ..++.+.++++|+||..++.+.-+. . +.+.+|.+|||.+...
T Consensus 180 lL~~~gAtVtv~hs~T~~L~~~~~~ADIVI~Avg~p~~I~------~---~~vk~GavVIDvgi~~ 236 (286)
T 4a5o_A 180 ELLLGGCTVTVTHRFTRDLADHVSRADLVVVAAGKPGLVK------G---EWIKEGAIVIDVGINR 236 (286)
T ss_dssp HHHHTTCEEEEECTTCSCHHHHHHTCSEEEECCCCTTCBC------G---GGSCTTCEEEECCSCS
T ss_pred HHHHCCCeEEEEeCCCcCHHHHhccCCEEEECCCCCCCCC------H---HHcCCCeEEEEecccc
Confidence 355567642 4578999999999999998754221 1 2357899999998765
No 247
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=61.46 E-value=1.8 Score=38.43 Aligned_cols=44 Identities=14% Similarity=0.160 Sum_probs=26.8
Q ss_pred CHHHHHhcCCEEEEe--cCChHHHHHHhcCCCcccccCCCCCEEEEcCC
Q 025140 18 SPDEVAASCDVTFAM--LADPESAMDVACGKHGAASGMGPGKGYVDVST 64 (257)
Q Consensus 18 s~~ea~~~advvi~~--l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST 64 (257)
++.+.++++|+||.+ +|.... ..++ . +..++.+.+|.+|||++.
T Consensus 248 ~l~e~~~~aDvVI~~~~~pg~~a-p~li-~-~~~l~~mk~g~vIVdva~ 293 (401)
T 1x13_A 248 LFAAQAKEVDIIVTTALIPGKPA-PKLI-T-REMVDSMKAGSVIVDLAA 293 (401)
T ss_dssp HHHHHHHHCSEEEECCCCTTSCC-CCCB-C-HHHHHTSCTTCEEEETTG
T ss_pred HHHHHhCCCCEEEECCccCCCCC-Ceee-C-HHHHhcCCCCcEEEEEcC
Confidence 366788889999999 442111 0111 0 123455778889999885
No 248
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=61.29 E-value=4.2 Score=37.20 Aligned_cols=53 Identities=9% Similarity=0.076 Sum_probs=39.4
Q ss_pred hhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCH
Q 025140 8 FYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDG 67 (257)
Q Consensus 8 ~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p 67 (257)
....|+. ..++.++++++|+||+|+++...+. ...++.+++|.+++|.+....
T Consensus 313 A~~~Ga~-~~~l~e~l~~aDvVi~atgt~~~i~------~~~l~~mk~ggilvnvG~~~~ 365 (494)
T 3ce6_A 313 AMMEGFD-VVTVEEAIGDADIVVTATGNKDIIM------LEHIKAMKDHAILGNIGHFDN 365 (494)
T ss_dssp HHHTTCE-ECCHHHHGGGCSEEEECSSSSCSBC------HHHHHHSCTTCEEEECSSSGG
T ss_pred HHHcCCE-EecHHHHHhCCCEEEECCCCHHHHH------HHHHHhcCCCcEEEEeCCCCC
Confidence 4456876 4578899999999999998765322 134456789999999998654
No 249
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=60.86 E-value=3.5 Score=35.98 Aligned_cols=67 Identities=6% Similarity=0.031 Sum_probs=45.6
Q ss_pred hhhhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEE
Q 025140 6 NAFYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 6 ~~~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~v 85 (257)
+++.+.|++..++ +|+. +||+|+ .+..+. . +. ...+.+|.+++-... +.....+.+.+.++|+.++
T Consensus 48 ~~y~~aga~i~~~-~~~~-~ad~il-~vk~p~--~------~~-~~~l~~~~~~~~~~~--~~~~~~~~~~l~~~gi~~i 113 (369)
T 2eez_A 48 AEYARAGAELVGR-EEAW-GAEMVV-KVKEPL--P------EE-YGFLREGLILFTYLH--LAADRGLTEAMLRSGVTGI 113 (369)
T ss_dssp HHHHHHTCEEECH-HHHT-TSSEEE-CSSCCC--G------GG-GGGCCTTCEEEECCC--GGGCHHHHHHHHHHTCEEE
T ss_pred HHHHHCCCEEecc-ccee-cCCEEE-EECCCC--H------HH-HhhcCCCcEEEEEec--ccCCHHHHHHHHHCCCeEE
Confidence 5677789999888 7788 899976 443321 1 12 344668888776654 3335567778888999988
Q ss_pred E
Q 025140 86 E 86 (257)
Q Consensus 86 d 86 (257)
+
T Consensus 114 a 114 (369)
T 2eez_A 114 A 114 (369)
T ss_dssp E
T ss_pred E
Confidence 4
No 250
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=60.80 E-value=3.7 Score=35.89 Aligned_cols=37 Identities=14% Similarity=0.074 Sum_probs=26.8
Q ss_pred HHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCC
Q 025140 22 VAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTV 65 (257)
Q Consensus 22 a~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~ 65 (257)
.++++|+||.|+|...+-+-+- .+ +..|..+||.|+-
T Consensus 76 ~~~~vDvvf~a~p~~~s~~~a~----~~---~~~G~~vIDlSa~ 112 (359)
T 4dpl_A 76 LMDDVDIIFSPLPQGAAGPVEE----QF---AKEGFPVISNSPD 112 (359)
T ss_dssp GCTTCCEEEECCCTTTHHHHHH----HH---HHTTCEEEECSST
T ss_pred HhcCCCEEEECCChHHHHHHHH----HH---HHCCCEEEEcCCC
Confidence 3578999999999877644331 22 3468899999975
No 251
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=60.80 E-value=3.7 Score=35.89 Aligned_cols=37 Identities=14% Similarity=0.074 Sum_probs=26.8
Q ss_pred HHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCC
Q 025140 22 VAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTV 65 (257)
Q Consensus 22 a~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~ 65 (257)
.++++|+||.|+|...+-+-+- .+ +..|..+||.|+-
T Consensus 76 ~~~~vDvvf~a~p~~~s~~~a~----~~---~~~G~~vIDlSa~ 112 (359)
T 4dpk_A 76 LMDDVDIIFSPLPQGAAGPVEE----QF---AKEGFPVISNSPD 112 (359)
T ss_dssp GCTTCCEEEECCCTTTHHHHHH----HH---HHTTCEEEECSST
T ss_pred HhcCCCEEEECCChHHHHHHHH----HH---HHCCCEEEEcCCC
Confidence 3578999999999877644331 22 3468899999975
No 252
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=60.20 E-value=4.3 Score=34.31 Aligned_cols=51 Identities=10% Similarity=-0.027 Sum_probs=36.4
Q ss_pred hhhhcCccc------cCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCC
Q 025140 7 AFYYSRCRY------QPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVD 66 (257)
Q Consensus 7 ~~~~~Ga~~------~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~ 66 (257)
-|...|+++ ..++.+.++++|+||.+++.+.-+. . +.+.+|.+|||.+...
T Consensus 179 lL~~~gAtVtv~h~~t~~L~~~~~~ADIVI~Avg~p~~I~------~---~~vk~GavVIDVgi~~ 235 (285)
T 3p2o_A 179 MLLNAGATVSVCHIKTKDLSLYTRQADLIIVAAGCVNLLR------S---DMVKEGVIVVDVGINR 235 (285)
T ss_dssp HHHHTTCEEEEECTTCSCHHHHHTTCSEEEECSSCTTCBC------G---GGSCTTEEEEECCCEE
T ss_pred HHHHCCCeEEEEeCCchhHHHHhhcCCEEEECCCCCCcCC------H---HHcCCCeEEEEeccCc
Confidence 355667643 4688999999999999998654221 1 2357899999998764
No 253
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=59.51 E-value=3.1 Score=34.65 Aligned_cols=57 Identities=14% Similarity=0.200 Sum_probs=35.7
Q ss_pred cCCEEEEecCChHHHHHHhcCCCccc-ccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCc-EEEe
Q 025140 25 SCDVTFAMLADPESAMDVACGKHGAA-SGMGPGKGYVDVSTVDGDTSKLINGHIKATGAS-FLEA 87 (257)
Q Consensus 25 ~advvi~~l~~~~~v~~v~~~~~~~~-~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~-~vda 87 (257)
++|+||.|+|..... ++. .+- +.+.++.+++|+++.++..++ +.++++++|+. +++.
T Consensus 180 ~~DivIn~t~~~~~~-~~~----~i~~~~l~~~~~v~D~~y~p~~~t~-ll~~a~~~G~~~~v~G 238 (272)
T 1p77_A 180 TYDLVINATSAGLSG-GTA----SVDAEILKLGSAFYDMQYAKGTDTP-FIALCKSLGLTNVSDG 238 (272)
T ss_dssp CCSEEEECCCC------------CCCHHHHHHCSCEEESCCCTTSCCH-HHHHHHHTTCCCEECS
T ss_pred CCCEEEECCCCCCCC-CCC----CCCHHHcCCCCEEEEeeCCCCcCCH-HHHHHHHcCCCEeeCC
Confidence 899999999986542 121 111 123468899999997655243 56778889987 7753
No 254
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=59.51 E-value=3.6 Score=36.31 Aligned_cols=37 Identities=19% Similarity=0.153 Sum_probs=26.3
Q ss_pred HHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCC
Q 025140 22 VAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTV 65 (257)
Q Consensus 22 a~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~ 65 (257)
..+++|+||+|+|+..+-+-+ ..+ +..|..|||.|+-
T Consensus 90 ~~~~~Dvvf~alp~~~s~~~~----~~~---~~~G~~VIDlSa~ 126 (381)
T 3hsk_A 90 NFLECDVVFSGLDADVAGDIE----KSF---VEAGLAVVSNAKN 126 (381)
T ss_dssp TGGGCSEEEECCCHHHHHHHH----HHH---HHTTCEEEECCST
T ss_pred hcccCCEEEECCChhHHHHHH----HHH---HhCCCEEEEcCCc
Confidence 467899999999986654322 122 2468899999975
No 255
>3gfs_A FMN-dependent NADPH-azoreductase; flavoproteins, quinone reductase, flavodoxin, oligomerization, flavoprotein, oxidoreductase; HET: FMN; 2.10A {Bacillus subtilis} SCOP: c.23.5.4 PDB: 1nni_1* 2gsw_A* 3gfr_A* 3gfq_A*
Probab=59.45 E-value=28 Score=26.27 Aligned_cols=94 Identities=6% Similarity=0.007 Sum_probs=55.2
Q ss_pred HHHhcCCEEEEecCCh-----HHHHHHhcCCCcccccCCCCCEEEEc--CC---CCHHHHHHHHHHHHHcCCcEEEecCC
Q 025140 21 EVAASCDVTFAMLADP-----ESAMDVACGKHGAASGMGPGKGYVDV--ST---VDGDTSKLINGHIKATGASFLEAPVS 90 (257)
Q Consensus 21 ea~~~advvi~~l~~~-----~~v~~v~~~~~~~~~~l~~g~~ivd~--ST---~~p~~~~~la~~~~~~G~~~vdapV~ 90 (257)
+.+.++|.||+..|.. ..++..+ +-+......|+.+.-. |. ........+.+.+...|..++..++.
T Consensus 59 ~~i~~aD~ii~~tP~y~~~~p~~lk~~l---D~l~~~~~~gK~~~~~~~sgg~~g~~~a~~~l~~~l~~~g~~~v~~~v~ 135 (174)
T 3gfs_A 59 QRVTKADAIVLLSPEYHSGMSGALKNAL---DFLSSEQFKYKPVALLAVAGGGDGGINALNNMRTVMRGVYANVIPKQLV 135 (174)
T ss_dssp HHHHHCSSEEEEEECSSSSCCHHHHHHH---HTCCHHHHTTCEEEEEEECCSTTCSHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHCCEEEEEcCCcCCCCCHHHHHHH---HHhCHhhhCCCcEEEEEECCCChhHHHHHHHHHHHHHHcCCEEecceEE
Confidence 4677899999998874 5667666 2222212245543322 22 22345567778888889999887776
Q ss_pred CChHHh--hcCceEEEecCChhHHHHHHHHHHHhc
Q 025140 91 GSKKPA--EDGQLIFLAAGDKSLYNTVAPLLDIMG 123 (257)
Q Consensus 91 g~~~~a--~~g~l~i~~gg~~~~~~~~~~ll~~~~ 123 (257)
-+...- ..+.+ +++..++++.+++.+.
T Consensus 136 i~~~~f~~~~~~~------~~~~~~~l~~~~~~l~ 164 (174)
T 3gfs_A 136 LKPVHIDVENATV------AENIKESIKELVEELS 164 (174)
T ss_dssp ECGGGEETTTTEE------CHHHHHHHHHHHHHHH
T ss_pred echhhcCCCCCcc------CHHHHHHHHHHHHHHH
Confidence 543321 11211 3566677777776664
No 256
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=59.39 E-value=10 Score=32.31 Aligned_cols=56 Identities=11% Similarity=-0.013 Sum_probs=36.2
Q ss_pred CHHHHHhcCCEEEEecCChHH---------------HHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHH
Q 025140 18 SPDEVAASCDVTFAMLADPES---------------AMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIK 78 (257)
Q Consensus 18 s~~ea~~~advvi~~l~~~~~---------------v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~ 78 (257)
+..+++++||+||++.+.+.. ++++. +.+.+. .++.++|. .|++++..-.+.....
T Consensus 67 ~~~~a~~~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~---~~i~~~-~p~a~viv-~tNPv~~~~~~~~k~s 137 (318)
T 1y6j_A 67 GDYSDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVT---QNIMKY-YNHGVILV-VSNPVDIITYMIQKWS 137 (318)
T ss_dssp -CGGGGTTCSEEEECCCC------CHHHHHHHHHHHHHHHH---HHHHHH-CCSCEEEE-CSSSHHHHHHHHHHHH
T ss_pred CCHHHhCCCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHH---HHHHHh-CCCcEEEE-ecCcHHHHHHHHHHHc
Confidence 447789999999999987642 23443 344444 46667777 5888888777765543
No 257
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=59.05 E-value=52 Score=28.49 Aligned_cols=99 Identities=9% Similarity=0.087 Sum_probs=57.4
Q ss_pred CCEEEEecC-ChHHHHHHhcCCCcccccCCCCCEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEecCCCCh-HHh----hc
Q 025140 26 CDVTFAMLA-DPESAMDVACGKHGAASGMGPGKGYVDVS-TVDGDTSKLINGHIKATGASFLEAPVSGSK-KPA----ED 98 (257)
Q Consensus 26 advvi~~l~-~~~~v~~v~~~~~~~~~~l~~g~~ivd~S-T~~p~~~~~la~~~~~~G~~~vdapV~g~~-~~a----~~ 98 (257)
-+.|=+-+. +.....+++ +.+.+....-.+.||.. .-+++++.++++.+++.|+.|++-|+...- ... +.
T Consensus 163 f~~iKik~g~~~~~~~e~v---~avr~a~gd~~l~vD~n~~~~~~~a~~~~~~l~~~~i~~iEqP~~~~~~~~~~~l~~~ 239 (384)
T 2pgw_A 163 ERVFYLKVGRGEKLDLEIT---AAVRGEIGDARLRLDANEGWSVHDAINMCRKLEKYDIEFIEQPTVSWSIPAMAHVREK 239 (384)
T ss_dssp CCEEEEECCSCHHHHHHHH---HHHHTTSTTCEEEEECTTCCCHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHH
T ss_pred CCEEEECcCCCHHHHHHHH---HHHHHHcCCcEEEEecCCCCCHHHHHHHHHHHHhcCCCEEeCCCChhhHHHHHHHHhh
Confidence 355555444 333333343 23333332335778875 357899999999999999999999984221 111 12
Q ss_pred CceEEEecCChhHHHHHHHHHHHhcCCce
Q 025140 99 GQLIFLAAGDKSLYNTVAPLLDIMGKSRF 127 (257)
Q Consensus 99 g~l~i~~gg~~~~~~~~~~ll~~~~~~~~ 127 (257)
-..+++.++.-...+.++.+++.=..+++
T Consensus 240 ~~iPI~~de~i~~~~~~~~~i~~~~~d~v 268 (384)
T 2pgw_A 240 VGIPIVADQAAFTLYDVYEICRQRAADMI 268 (384)
T ss_dssp CSSCEEESTTCCSHHHHHHHHHTTCCSEE
T ss_pred CCCCEEEeCCcCCHHHHHHHHHcCCCCEE
Confidence 23466666655455667777765444433
No 258
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=59.03 E-value=7 Score=34.08 Aligned_cols=49 Identities=14% Similarity=0.302 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHhcCCceecCCCchHHHHHHHHHHHHHHHH------HHHHHHHHHHHHcCC
Q 025140 111 LYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSMM------ATFSEGLLHSEKVGL 165 (257)
Q Consensus 111 ~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~~~~~~------~~~~Ea~~la~~~Gl 165 (257)
+++.++.+++. |.++..+-.+=+|. .|++..-+. ..+.|++.-|++.|.
T Consensus 151 ii~~l~~~l~~-G~~I~~I~GIlnGT-----~nyil~~m~~~~~~g~~f~~~l~eAq~~Gy 205 (358)
T 1ebf_A 151 IISFLREIIQT-GDEVEKIEGIFSGT-----LSYIFNEFSTSQANDVKFSDVVKVAKKLGY 205 (358)
T ss_dssp CHHHHHHHHHH-TCCEEEEEEECCHH-----HHHHHHHHSCSSCCCCCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHc-CCCeEEEEEEEeec-----ceeeecccccccccCCCHHHHHHHHHHcCC
Confidence 56777777643 23566663322333 344433322 468899999999885
No 259
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=58.77 E-value=10 Score=31.72 Aligned_cols=58 Identities=14% Similarity=0.088 Sum_probs=36.5
Q ss_pred CccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCC-CHHHHHHHHHH
Q 025140 12 RCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTV-DGDTSKLINGH 76 (257)
Q Consensus 12 Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~-~p~~~~~la~~ 76 (257)
|....+++.++++++|+||-+.+ ++++.+.+ ..+ +..|.-+|-.||. +++...++.+.
T Consensus 60 gv~v~~dl~~ll~~~DVVIDfT~-p~a~~~~~---~~a---l~~G~~vVigTTG~s~~~~~~L~~a 118 (272)
T 4f3y_A 60 GVALTDDIERVCAEADYLIDFTL-PEGTLVHL---DAA---LRHDVKLVIGTTGFSEPQKAQLRAA 118 (272)
T ss_dssp SCBCBCCHHHHHHHCSEEEECSC-HHHHHHHH---HHH---HHHTCEEEECCCCCCHHHHHHHHHH
T ss_pred CceecCCHHHHhcCCCEEEEcCC-HHHHHHHH---HHH---HHcCCCEEEECCCCCHHHHHHHHHH
Confidence 67778999999999999988764 56655554 222 3356656666654 34443344433
No 260
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=58.58 E-value=53 Score=24.30 Aligned_cols=59 Identities=19% Similarity=0.179 Sum_probs=36.7
Q ss_pred CEEEEcCCCC-----HHHHHHHHHHHHHcCCc-EEEecCCCChHHhhcCceEEEecCChhHHHHHHHHHHHhcCC-ceec
Q 025140 57 KGYVDVSTVD-----GDTSKLINGHIKATGAS-FLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKS-RFYL 129 (257)
Q Consensus 57 ~~ivd~ST~~-----p~~~~~la~~~~~~G~~-~vdapV~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~-~~~~ 129 (257)
++|||..+-. |. ...+.+.++.+|+. |+..|+..... +.+.++++..+++..+.. .+||
T Consensus 44 ~~IIdlR~~~E~~~~p~-~~~~~~~~~~~gi~~~~~iPv~~~~~-------------~~~~~~~~~~~l~~~~~pVlvHC 109 (156)
T 2f46_A 44 KTIICNRPDREEESQPD-FAQIKQWLEQAGVTGFHHQPVTARDI-------------QKHDVETFRQLIGQAEYPVLAYC 109 (156)
T ss_dssp CEEEECSCTTSSTTCCC-HHHHHHHHGGGTCCEEEECCCCTTTC-------------CHHHHHHHHHHHHTSCSSEEEEC
T ss_pred CEEEECCCCccccCCCc-HHHHHHHHHHCCCHhheECccCCCCC-------------CHHHHHHHHHHHHhCCCCEEEEC
Confidence 6889997532 22 23455667788999 99999975421 234455556666554444 4666
No 261
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=58.42 E-value=34 Score=29.92 Aligned_cols=71 Identities=14% Similarity=0.053 Sum_probs=46.4
Q ss_pred CCEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEecCCCCh-HHh----hcCceEEEecCChhHHHHHHHHHHHhcCCc
Q 025140 56 GKGYVDVS-TVDGDTSKLINGHIKATGASFLEAPVSGSK-KPA----EDGQLIFLAAGDKSLYNTVAPLLDIMGKSR 126 (257)
Q Consensus 56 g~~ivd~S-T~~p~~~~~la~~~~~~G~~~vdapV~g~~-~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~ 126 (257)
-.+.||.. .-+++++.++.+.+++.|+.|++-|+...- ... +.-..+|..+..-.....++++++.=..++
T Consensus 220 ~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~ 296 (390)
T 3ugv_A 220 TALMVDFNQGLDMAEAMHRTRQIDDLGLEWIEEPVVYDNFDGYAQLRHDLKTPLMIGENFYGPREMHQALQAGACDL 296 (390)
T ss_dssp SEEEEECTTCCCHHHHHHHHHHHTTSCCSEEECCSCTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhhCCCEEECCCCcccHHHHHHHHHhcCCCEEeCCCcCCHHHHHHHHHcCCCCE
Confidence 36788986 467899999999999999999999986321 111 112346666655444556666665433333
No 262
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=57.41 E-value=6.3 Score=35.55 Aligned_cols=69 Identities=13% Similarity=0.112 Sum_probs=45.2
Q ss_pred cCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHH-------HHHHHHHHHHHcCCc
Q 025140 11 SRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGD-------TSKLINGHIKATGAS 83 (257)
Q Consensus 11 ~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~-------~~~~la~~~~~~G~~ 83 (257)
.|.....|+.|+....|++++++|.... .+++ +++.+.- - +.+|..|..-|+ ..+++.+.++++|.+
T Consensus 50 ~G~~~y~sl~~lp~~~Dlavi~vp~~~~-~~~v---~e~~~~G-i-~~vv~~s~G~~e~g~~g~~~~~~l~~~a~~~g~~ 123 (457)
T 2csu_A 50 QGVKAYKSVKDIPDEIDLAIIVVPKRFV-KDTL---IQCGEKG-V-KGVVIITAGFGETGEEGKREEKELVEIAHKYGMR 123 (457)
T ss_dssp TTEECBSSTTSCSSCCSEEEECSCHHHH-HHHH---HHHHHHT-C-CEEEECCCSSTTSCHHHHHHHHHHHHHHHHHTCE
T ss_pred CCEeccCCHHHcCCCCCEEEEecCHHHH-HHHH---HHHHHcC-C-CEEEEecCCCCccccccHHHHHHHHHHHHHcCCE
Confidence 4777889999998899999999997544 3444 2333321 1 344444433221 256788888888988
Q ss_pred EE
Q 025140 84 FL 85 (257)
Q Consensus 84 ~v 85 (257)
++
T Consensus 124 vi 125 (457)
T 2csu_A 124 II 125 (457)
T ss_dssp EE
T ss_pred EE
Confidence 77
No 263
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=56.94 E-value=4.4 Score=34.28 Aligned_cols=51 Identities=12% Similarity=0.150 Sum_probs=36.6
Q ss_pred hhhcCccc------cCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCH
Q 025140 8 FYYSRCRY------QPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDG 67 (257)
Q Consensus 8 ~~~~Ga~~------~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p 67 (257)
|...|+++ ..++.+.++++|+||.+++.+. ++ . . +.+++|.+|||.+....
T Consensus 179 L~~~gAtVtv~hs~t~~L~~~~~~ADIVI~Avg~p~----lI-~-~---~~vk~GavVIDVgi~r~ 235 (288)
T 1b0a_A 179 LLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPG----FI-P-G---DWIKEGAIVIDVGINRL 235 (288)
T ss_dssp HHTTTCEEEEECSSCSCHHHHHHHCSEEEECSCCTT----CB-C-T---TTSCTTCEEEECCCEEC
T ss_pred HHHCCCeEEEEeCCchhHHHHhccCCEEEECCCCcC----cC-C-H---HHcCCCcEEEEccCCcc
Confidence 45566653 3678999999999999999776 22 1 1 12478999999887643
No 264
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=56.72 E-value=12 Score=32.00 Aligned_cols=121 Identities=14% Similarity=0.135 Sum_probs=67.4
Q ss_pred CHHHHHh-cCCEEEEecCCh---HHHHHHhcCCCcccccCCCCCEEEEcCCC-CHHHHHHHHHHHHHcCCcE-EEecCCC
Q 025140 18 SPDEVAA-SCDVTFAMLADP---ESAMDVACGKHGAASGMGPGKGYVDVSTV-DGDTSKLINGHIKATGASF-LEAPVSG 91 (257)
Q Consensus 18 s~~ea~~-~advvi~~l~~~---~~v~~v~~~~~~~~~~l~~g~~ivd~ST~-~p~~~~~la~~~~~~G~~~-vdapV~g 91 (257)
|+.+++. +.|+|+.|.|+. +...+.+ ...+..|+-||-.+-- -....+++.+.++++|+.| .++.|.+
T Consensus 78 d~~~ll~~~iDvVv~~t~~~~~~~~~~~~~------~~AL~aGkhVvtanK~pla~~~~eL~~~A~~~gv~~~~ea~vg~ 151 (331)
T 3c8m_A 78 SASEALARDFDIVVDATPASADGKKELAFY------KETFENGKDVVTANKSGLANFWPEIMEYARSNNRRIRYEATVAG 151 (331)
T ss_dssp CHHHHHHSSCSEEEECSCCCSSSHHHHHHH------HHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTCCEECGGGSST
T ss_pred CHHHHhCCCCCEEEECCCCCCccchHHHHH------HHHHHCCCeEEecCchhhHHHHHHHHHHHHHcCCEEEEEeeccc
Confidence 8888872 589999999994 3333333 2334567777665431 1356778888888889865 2443433
Q ss_pred ChHHhhcCceEEEecCChhHHHHHHHHHHHhcCCceecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 025140 92 SKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSMMATFSEGLLHSEKVGL 165 (257)
Q Consensus 92 ~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gl 165 (257)
+. ..++.++.++. +.++..+-.+=+|..-=+.+.+ . .-..+.|++.-|++.|.
T Consensus 152 gi----------------Pii~~l~~~l~--g~~I~~I~GI~nGT~nyil~~m-~--~g~~f~~~l~eAq~~Gy 204 (331)
T 3c8m_A 152 GV----------------PLFSFIDYSVL--PSRIKKFRGIVSLTINYFIREL-A--NKREFDDVLSEATKLGI 204 (331)
T ss_dssp TS----------------CCHHHHHHHST--TCCCCEEEEECCHHHHHHHHHH-H--TTCCHHHHHHHHHHHTS
T ss_pred cc----------------HHHHHHHHHhh--cCcccEEEEEEeccceeEecch-h--cCCCHHHHHHHHHHcCC
Confidence 32 24566666663 4455444222123321111111 1 12246677777777774
No 265
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=56.66 E-value=31 Score=26.42 Aligned_cols=99 Identities=13% Similarity=0.035 Sum_probs=55.3
Q ss_pred HHHHhcCCEEEEecCCh-----HHHHHHhcCCCcccc---cCCCCCEEEEcCCC-C----HHHHHHHHHHHHHcCCcEEE
Q 025140 20 DEVAASCDVTFAMLADP-----ESAMDVACGKHGAAS---GMGPGKGYVDVSTV-D----GDTSKLINGHIKATGASFLE 86 (257)
Q Consensus 20 ~ea~~~advvi~~l~~~-----~~v~~v~~~~~~~~~---~l~~g~~ivd~ST~-~----p~~~~~la~~~~~~G~~~vd 86 (257)
.+.+.++|.||+..|.. ..++..+ +.+.. ...+|+.++-.+|. . ......+...+...|..++.
T Consensus 67 ~~~l~~aD~ii~~sP~y~~~~p~~lK~~i---D~~~~~~~~~l~gK~~~~~~t~gg~~g~~~~~~~l~~~l~~~g~~~~~ 143 (193)
T 1rtt_A 67 REQIRAADALLFATPEYNYSMAGVLKNAI---DWASRPPEQPFSGKPAAILGASAGRFGTARAQYHLRQTLVFLDVHPLN 143 (193)
T ss_dssp HHHHHHCSEEEEECCEETTEECHHHHHHH---HHHTCSSSCTTTTCEEEEEEECSSTTTTHHHHHHHHHHHHHHTCEECC
T ss_pred HHHHHhCCEEEEEccccccCcCHHHHHHH---HHhccccCcccCCCeEEEEEeCCCCCccHHHHHHHHHHHHHcCCEEcC
Confidence 35677899999999874 4566555 22221 12355544333332 2 23445666777778988887
Q ss_pred e-cCC-CChHHh--hcCceEEEecCChhHHHHHHHHHHHhcCCc
Q 025140 87 A-PVS-GSKKPA--EDGQLIFLAAGDKSLYNTVAPLLDIMGKSR 126 (257)
Q Consensus 87 a-pV~-g~~~~a--~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~ 126 (257)
. ++. .+.... ..|.+ -+++..++++.+++.+..-+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~~~l~~~~ 182 (193)
T 1rtt_A 144 KPEVMISSAQNAFDAQGRL-----LDDKARELIQQQLQALQLWV 182 (193)
T ss_dssp SSCEEECSGGGTBCSTTCB-----CCHHHHHHHHHHHHHHHC--
T ss_pred CCeEEecchHhhcCcCCCc-----CCHHHHHHHHHHHHHHHHHH
Confidence 5 222 222222 22331 25677788888888775533
No 266
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=55.53 E-value=21 Score=30.15 Aligned_cols=56 Identities=14% Similarity=0.083 Sum_probs=33.5
Q ss_pred cCCHHHHHhcCCEEEEecCChH---------------HHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHH
Q 025140 16 QPSPDEVAASCDVTFAMLADPE---------------SAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHI 77 (257)
Q Consensus 16 ~~s~~ea~~~advvi~~l~~~~---------------~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~ 77 (257)
..+. +++++||+||++++.+. .++++. +.+.+. .+..++|. .|++++..-.+....
T Consensus 62 t~d~-~a~~~aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~---~~i~~~-~p~a~vi~-~tNPv~~~t~~~~~~ 132 (309)
T 1ur5_A 62 TNNY-ADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACI---SQAAPL-SPNAVIIM-VNNPLDAMTYLAAEV 132 (309)
T ss_dssp ESCG-GGGTTCSEEEECCCC--------CHHHHHHHHHHHHHH---HHHGGG-CTTCEEEE-CCSSHHHHHHHHHHH
T ss_pred CCCH-HHHCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHH---HHHHhh-CCCeEEEE-cCCchHHHHHHHHHH
Confidence 3666 88999999999986552 123343 333343 35666666 467777765554443
No 267
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=55.42 E-value=4.4 Score=35.19 Aligned_cols=41 Identities=15% Similarity=0.116 Sum_probs=27.5
Q ss_pred CHHHHHh-cCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCC
Q 025140 18 SPDEVAA-SCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTV 65 (257)
Q Consensus 18 s~~ea~~-~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~ 65 (257)
++.++.+ ++|+||+|+|.....+.+ ..+ +..|..|||.|..
T Consensus 75 ~~~~~~~~~~DvV~~atp~~~~~~~a----~~~---~~aG~~VId~s~~ 116 (354)
T 1ys4_A 75 DPKHEEFEDVDIVFSALPSDLAKKFE----PEF---AKEGKLIFSNASA 116 (354)
T ss_dssp CTTSGGGTTCCEEEECCCHHHHHHHH----HHH---HHTTCEEEECCST
T ss_pred CHHHHhcCCCCEEEECCCchHHHHHH----HHH---HHCCCEEEECCch
Confidence 5556556 899999999976554322 122 2357789999875
No 268
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=55.05 E-value=6.2 Score=33.28 Aligned_cols=42 Identities=14% Similarity=0.198 Sum_probs=31.1
Q ss_pred cCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCC
Q 025140 16 QPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVD 66 (257)
Q Consensus 16 ~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~ 66 (257)
..++.+.++++|+||.+++.+.- + . . +.+.+|.+|||.+...
T Consensus 194 t~~L~~~~~~ADIVI~Avg~p~~----I-~-~---~~vk~GavVIDVgi~r 235 (281)
T 2c2x_A 194 TRDLPALTRQADIVVAAVGVAHL----L-T-A---DMVRPGAAVIDVGVSR 235 (281)
T ss_dssp CSCHHHHHTTCSEEEECSCCTTC----B-C-G---GGSCTTCEEEECCEEE
T ss_pred hhHHHHHHhhCCEEEECCCCCcc----c-C-H---HHcCCCcEEEEccCCC
Confidence 36789999999999999997762 2 1 1 1246789999987654
No 269
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=54.87 E-value=80 Score=27.30 Aligned_cols=78 Identities=9% Similarity=-0.090 Sum_probs=51.5
Q ss_pred cccccCCC-CCEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEecCCCChHHh----hcCceEEEecCChhHHHHHHHHHHH
Q 025140 48 GAASGMGP-GKGYVDVS-TVDGDTSKLINGHIKATGASFLEAPVSGSKKPA----EDGQLIFLAAGDKSLYNTVAPLLDI 121 (257)
Q Consensus 48 ~~~~~l~~-g~~ivd~S-T~~p~~~~~la~~~~~~G~~~vdapV~g~~~~a----~~g~l~i~~gg~~~~~~~~~~ll~~ 121 (257)
.+.+...+ -.+.||.. .-+++++.++++.+++.|+ |++-|+. ..... +.-..+|..++.-.....++++++.
T Consensus 181 avR~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i-~iEqP~~-~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~ 258 (378)
T 3eez_A 181 DVEDIREPGEIVLYDVNRGWTRQQALRVMRATEDLHV-MFEQPGE-TLDDIAAIRPLHSAPVSVDECLVTLQDAARVARD 258 (378)
T ss_dssp HHTTSCCTTCEEEEECTTCCCHHHHHHHHHHTGGGTC-CEECCSS-SHHHHHHTGGGCCCCEEECTTCCSHHHHHHHHHT
T ss_pred HHHHHcCCCceEEEECCCCCCHHHHHHHHHHhccCCe-EEecCCC-CHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHc
Confidence 33344433 36789986 4678999999999999999 9999998 33322 1223467776665556667777765
Q ss_pred hcCCce
Q 025140 122 MGKSRF 127 (257)
Q Consensus 122 ~~~~~~ 127 (257)
=+.+++
T Consensus 259 ~~~d~v 264 (378)
T 3eez_A 259 GLAEVF 264 (378)
T ss_dssp TCCSEE
T ss_pred CCCCEE
Confidence 444443
No 270
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=54.62 E-value=17 Score=30.82 Aligned_cols=59 Identities=7% Similarity=-0.036 Sum_probs=36.9
Q ss_pred cccCCHHHHHhcCCEEEEecCChH---------------HHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHH
Q 025140 14 RYQPSPDEVAASCDVTFAMLADPE---------------SAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHI 77 (257)
Q Consensus 14 ~~~~s~~ea~~~advvi~~l~~~~---------------~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~ 77 (257)
++..+..+++++||+||++.+.+. .++++. +.+.+. .++.++|. .|.+++..-.+....
T Consensus 63 ~v~~~~~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~---~~i~~~-~p~a~viv-~tNPv~~~t~~~~k~ 136 (317)
T 3d0o_A 63 RVKAGEYSDCHDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIV---GEVMAS-KFDGIFLV-ATNPVDILAYATWKF 136 (317)
T ss_dssp EEEECCGGGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHH---HHHHHT-TCCSEEEE-CSSSHHHHHHHHHHH
T ss_pred EEEeCCHHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHH---HHHHHh-CCCcEEEE-ecCcHHHHHHHHHHH
Confidence 333356888999999999986642 233333 334444 46677777 568887765554443
No 271
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=54.61 E-value=23 Score=30.42 Aligned_cols=74 Identities=11% Similarity=-0.015 Sum_probs=49.3
Q ss_pred CCEEEEcCC-CCHHHHHHHHHHHHHcCCcEEEecCCCCh-HHh----hcCceEEEecCChhHHHHHHHHHHHhcCCceec
Q 025140 56 GKGYVDVST-VDGDTSKLINGHIKATGASFLEAPVSGSK-KPA----EDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYL 129 (257)
Q Consensus 56 g~~ivd~ST-~~p~~~~~la~~~~~~G~~~vdapV~g~~-~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~~ 129 (257)
-.+.||... -+++++.++++.+++.|+.|++-|+.-.- ... +.-..+|+.++.-...+.++++++.=+-+++.+
T Consensus 190 ~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~~iPI~~de~~~~~~~~~~~i~~~~~d~v~i 269 (359)
T 1mdl_A 190 FGIMVDYNQSLDVPAAIKRSQALQQEGVTWIEEPTLQHDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGACRLAMP 269 (359)
T ss_dssp SEEEEECTTCSCHHHHHHHHHHHHHHTCSCEECCSCTTCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHhCCCeEECCCChhhHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEee
Confidence 457888864 57899999999999999999999984221 111 122456776666555667777776544444433
No 272
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=54.28 E-value=14 Score=31.63 Aligned_cols=57 Identities=9% Similarity=-0.048 Sum_probs=35.3
Q ss_pred ccCCHHHHHhcCCEEEEecCChH--------------------HHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHH
Q 025140 15 YQPSPDEVAASCDVTFAMLADPE--------------------SAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLIN 74 (257)
Q Consensus 15 ~~~s~~ea~~~advvi~~l~~~~--------------------~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la 74 (257)
...++.+++++||+||+++..+. .++++. +.+.+.. +..++|. .|++.+..-.++
T Consensus 68 ~t~d~~ea~~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~---~~i~~~~-p~a~vi~-~tNP~~~~t~~~ 142 (331)
T 1pzg_A 68 AEYSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIG---QNIKKYC-PKTFIIV-VTNPLDCMVKVM 142 (331)
T ss_dssp EECSHHHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHH---HHHHHHC-TTCEEEE-CCSSHHHHHHHH
T ss_pred EeCCHHHHhCCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHH---HHHHHHC-CCcEEEE-EcCchHHHHHHH
Confidence 35889889999999999983221 144444 3444443 5556654 466776655554
Q ss_pred HH
Q 025140 75 GH 76 (257)
Q Consensus 75 ~~ 76 (257)
..
T Consensus 143 ~~ 144 (331)
T 1pzg_A 143 CE 144 (331)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 273
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=54.20 E-value=10 Score=33.99 Aligned_cols=64 Identities=17% Similarity=0.155 Sum_probs=42.1
Q ss_pred CHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEecC
Q 025140 18 SPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPV 89 (257)
Q Consensus 18 s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vdapV 89 (257)
++.++++++|+||.|.|...... +. .. .+.+|+.++|.+...|.. ..+.+.+++.|+.+++.--
T Consensus 61 ~l~~~l~~~DvVIn~a~~~~~~~-i~---~a---~l~~g~~vvd~~~~~~~~-~~l~~aA~~aGv~~i~g~g 124 (450)
T 1ff9_A 61 ALDAEVAKHDLVISLIPYTFHAT-VI---KS---AIRQKKHVVTTSYVSPAM-MELDQAAKDAGITVMNEIG 124 (450)
T ss_dssp HHHHHHTTSSEEEECCC--CHHH-HH---HH---HHHHTCEEEESSCCCHHH-HHTHHHHHHTTCEEECSCB
T ss_pred HHHHHHcCCcEEEECCccccchH-HH---HH---HHhCCCeEEEeecccHHH-HHHHHHHHHCCCeEEeCCC
Confidence 45577889999999998643221 21 11 123567888888777765 6778888889998776543
No 274
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=54.17 E-value=38 Score=29.56 Aligned_cols=68 Identities=10% Similarity=0.004 Sum_probs=44.8
Q ss_pred CCEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEecCCCCh-HHh----hcCceEEEecCChhHHHHHHHHHHHhc
Q 025140 56 GKGYVDVS-TVDGDTSKLINGHIKATGASFLEAPVSGSK-KPA----EDGQLIFLAAGDKSLYNTVAPLLDIMG 123 (257)
Q Consensus 56 g~~ivd~S-T~~p~~~~~la~~~~~~G~~~vdapV~g~~-~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~ 123 (257)
-.+.||.. .-+++++.++++.+++.|+.|++-|+...- ... +.-..+|+.++.-...+.++++++.=.
T Consensus 208 ~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~ 281 (393)
T 2og9_A 208 VPLMVDANQQWDRPTAQRMCRIFEPFNLVWIEEPLDAYDHEGHAALALQFDTPIATGEMLTSAAEHGDLIRHRA 281 (393)
T ss_dssp SCEEEECTTCCCHHHHHHHHHHHGGGCCSCEECCSCTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTC
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhhCCCEEECCCCcccHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHCCC
Confidence 45888886 357899999999999999999999985321 111 122346666655444556666665433
No 275
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=54.10 E-value=61 Score=25.23 Aligned_cols=96 Identities=14% Similarity=0.052 Sum_probs=53.7
Q ss_pred HHHHHhcCCEEEEecCCh-----HHHHHHhcCCCcccc---cCCCCCEEEEcCCC-----CHHHHHHHHHHHHHcCCcEE
Q 025140 19 PDEVAASCDVTFAMLADP-----ESAMDVACGKHGAAS---GMGPGKGYVDVSTV-----DGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 19 ~~ea~~~advvi~~l~~~-----~~v~~v~~~~~~~~~---~l~~g~~ivd~ST~-----~p~~~~~la~~~~~~G~~~v 85 (257)
..+.+.++|.||++.|.+ ..++..+ +-+.. ....||.+.-.+|. .......+...+...|+..+
T Consensus 67 ~~~~i~~AD~iVi~tP~Y~~s~p~~LK~~i---D~~~~~~~~~l~gK~v~~v~tsgg~~g~~~a~~~Lr~il~~lg~~~v 143 (199)
T 4hs4_A 67 MAQQIATADAVVIVTPEYNYSVPGVLKNAI---DWLSRVSPQPLAGKPVALVTASPGMIGGARAQNHLRQSLVFLDAYVL 143 (199)
T ss_dssp HHHHHHHSSEEEEEECCBTTBCCHHHHHHH---HHHTTSSSCTTTTCEEEEEEECSSSSCSHHHHHHHHHHHHHTTCEEC
T ss_pred HHHHHHhCCEEEEEcCccCCCcCHHHHHHH---HHhcccCCcccCCCEEEEEEeCCCCcccHHHHHHHHHHHHHcCCEEc
Confidence 455678999999999985 3455554 22211 23466654444432 22334456666777788887
Q ss_pred Eec-CCCC-hHHh--hc-CceEEEecCChhHHHHHHHHHHHh
Q 025140 86 EAP-VSGS-KKPA--ED-GQLIFLAAGDKSLYNTVAPLLDIM 122 (257)
Q Consensus 86 dap-V~g~-~~~a--~~-g~l~i~~gg~~~~~~~~~~ll~~~ 122 (257)
..| |+-+ .... .. |.+. |++..++++.+++.+
T Consensus 144 ~~~~v~i~~~~~~fd~~~g~l~-----d~~~~~~l~~~~~~l 180 (199)
T 4hs4_A 144 NRPEAMIGQVTGKVDAQTLELS-----DVATREFLARQLDAL 180 (199)
T ss_dssp CSSCEEECSGGGTBCSSSCCBC-----CHHHHHHHHHHHHHH
T ss_pred CCCeEEeechhhhcCCcCCCcC-----CHHHHHHHHHHHHHH
Confidence 654 3322 1121 12 4432 666667777766655
No 276
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=54.10 E-value=21 Score=30.90 Aligned_cols=74 Identities=7% Similarity=-0.083 Sum_probs=49.6
Q ss_pred CCEEEEcCC-CCHHHHHHHHHHHHHcCCcEEEecCCCCh-HHh----hcCceEEEecCChhHHHHHHHHHHHhcCCceec
Q 025140 56 GKGYVDVST-VDGDTSKLINGHIKATGASFLEAPVSGSK-KPA----EDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYL 129 (257)
Q Consensus 56 g~~ivd~ST-~~p~~~~~la~~~~~~G~~~vdapV~g~~-~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~~ 129 (257)
-.+.||... -+++++.++++.+++.|+.|++-|+.-.- ... +.-..+|+.++.-...+.++++++.=+.+++.+
T Consensus 192 ~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~i 271 (371)
T 2ovl_A 192 FPLMVDANMKWTVDGAIRAARALAPFDLHWIEEPTIPDDLVGNARIVRESGHTIAGGENLHTLYDFHNAVRAGSLTLPEP 271 (371)
T ss_dssp SCEEEECTTCSCHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHHHCSCEEECTTCCSHHHHHHHHHHTCCSEECC
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCCCcccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEee
Confidence 468889864 57899999999999999999999984321 111 112356776666555667777776654444433
No 277
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=53.74 E-value=50 Score=28.75 Aligned_cols=71 Identities=8% Similarity=0.035 Sum_probs=48.0
Q ss_pred CCEEEEcCC-CCHHHHHHHHHHHHHcCCcEEEecCCCCh-HHh----hcCceEEEecCChhHHHHHHHHHHHhcCCc
Q 025140 56 GKGYVDVST-VDGDTSKLINGHIKATGASFLEAPVSGSK-KPA----EDGQLIFLAAGDKSLYNTVAPLLDIMGKSR 126 (257)
Q Consensus 56 g~~ivd~ST-~~p~~~~~la~~~~~~G~~~vdapV~g~~-~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~ 126 (257)
-.+.||... -+++++.++.+.+++.|+.|++-|+...- ... +.-..+|+.++.-...+.++++++.=..++
T Consensus 190 ~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~ 266 (397)
T 2qde_A 190 VDLFIDINGAWTYDQALTTIRALEKYNLSKIEQPLPAWDLDGMARLRGKVATPIYADESAQELHDLLAIINKGAADG 266 (397)
T ss_dssp SCEEEECTTCCCHHHHHHHHHHHGGGCCSCEECCSCTTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhCCCCEEECCCChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCE
Confidence 457888864 57899999999999999999999985321 111 122456666665545567777776544333
No 278
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=53.54 E-value=7.2 Score=33.22 Aligned_cols=49 Identities=12% Similarity=0.123 Sum_probs=36.2
Q ss_pred hhhcCccc------cCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCC
Q 025140 8 FYYSRCRY------QPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTV 65 (257)
Q Consensus 8 ~~~~Ga~~------~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~ 65 (257)
|...||++ ..++.+.++++|+||.++.-+.-+. .+..++|.++||.+..
T Consensus 199 L~~~~ATVTi~Hs~T~dl~~~~~~ADIvV~A~G~p~~i~---------~d~vk~GavVIDVGin 253 (303)
T 4b4u_A 199 LLQANATVTICHSRTQNLPELVKQADIIVGAVGKAELIQ---------KDWIKQGAVVVDAGFH 253 (303)
T ss_dssp HHHTTCEEEEECTTCSSHHHHHHTCSEEEECSCSTTCBC---------GGGSCTTCEEEECCCB
T ss_pred HHhcCCEEEEecCCCCCHHHHhhcCCeEEeccCCCCccc---------cccccCCCEEEEecee
Confidence 44556653 4678999999999999998765322 1235799999999875
No 279
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=52.96 E-value=35 Score=29.28 Aligned_cols=73 Identities=10% Similarity=-0.048 Sum_probs=49.1
Q ss_pred CCEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEecCCCCh-HHh----hcCceEEEecCChhHHHHHHHHHHHhcCCcee
Q 025140 56 GKGYVDVS-TVDGDTSKLINGHIKATGASFLEAPVSGSK-KPA----EDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFY 128 (257)
Q Consensus 56 g~~ivd~S-T~~p~~~~~la~~~~~~G~~~vdapV~g~~-~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~ 128 (257)
-.+.||.. .-+++++.++.+.+++.|+.|++-|+.-.- ... +.-..+++.++.-.....++++++.=..+++.
T Consensus 184 ~~l~vDan~~~~~~~a~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~ 262 (354)
T 3jva_A 184 IKLRLDANQAWTPKDAVKAIQALADYQIELVEQPVKRRDLEGLKYVTSQVNTTIMADESCFDAQDALELVKKGTVDVIN 262 (354)
T ss_dssp SEEEEECTTCSCHHHHHHHHHHTTTSCEEEEECCSCTTCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHHTCCSEEE
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCCChhhHHHHHHHHHhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEE
Confidence 35788885 467889999999999999999999996431 111 12235677666555556677777655444443
No 280
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=52.96 E-value=11 Score=32.86 Aligned_cols=106 Identities=18% Similarity=0.076 Sum_probs=53.8
Q ss_pred HHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHH-HHHHHHH-cCCcEEEecCCCChH----
Q 025140 21 EVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKL-INGHIKA-TGASFLEAPVSGSKK---- 94 (257)
Q Consensus 21 ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~-la~~~~~-~G~~~vdapV~g~~~---- 94 (257)
+..+++|+||+|++...+.+ +. .. . ..|..+||.|+-.--.... -.+|-.. |-.. -+.|-|+
T Consensus 76 ~~~~~~DvVf~alg~~~s~~-~~---~~---~-~~G~~vIDlSa~~R~~~~~~~~~~y~~~h~~~----~vyglPEv~~n 143 (352)
T 2nqt_A 76 AVLGGHDAVFLALPHGHSAV-LA---QQ---L-SPETLIIDCGADFRLTDAAVWERFYGSSHAGS----WPYGLPELPGA 143 (352)
T ss_dssp HHHTTCSEEEECCTTSCCHH-HH---HH---S-CTTSEEEECSSTTTCSCHHHHHHHHSSCCCCC----CCBSCTTSTTH
T ss_pred HHhcCCCEEEECCCCcchHH-HH---HH---H-hCCCEEEEECCCccCCcchhhhhhccccCCCC----eeEEecccccC
Confidence 44568999999999865433 32 12 2 4678999999764311111 1233321 1111 2334332
Q ss_pred --HhhcCceEEEecCCh-hHHHHHHHHHHHhcCC--ce---ecCCCchHHHH
Q 025140 95 --PAEDGQLIFLAAGDK-SLYNTVAPLLDIMGKS--RF---YLGDVGNGAAM 138 (257)
Q Consensus 95 --~a~~g~l~i~~gg~~-~~~~~~~~ll~~~~~~--~~---~~G~~G~a~~~ 138 (257)
......+.---||.. ...-.+.|+++..+-+ ++ +-|-.|+|...
T Consensus 144 ~~~i~~~~iIanPgC~tt~~~lal~PL~~~~~i~~~i~v~t~~g~SGaG~~~ 195 (352)
T 2nqt_A 144 RDQLRGTRRIAVPGCYPTAALLALFPALAADLIEPAVTVVAVSGTSGAGRAA 195 (352)
T ss_dssp HHHHTTCSEEECCCHHHHHHHHHHHHHHHTTCSCSEEEEEEEECGGGGCSSC
T ss_pred HHHHhcCCEEEcCCHHHHHHHHHHHHHHHcCCCcceEEEEEEeccccCCccc
Confidence 233334333334433 4445678888776543 22 22445665544
No 281
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=52.91 E-value=35 Score=29.85 Aligned_cols=72 Identities=11% Similarity=0.027 Sum_probs=48.3
Q ss_pred CCEEEEcCC-CCHHHHHHHHHHHHHcCCcEEEecCCCC-hHHh----hcCceEEEecCChhHHHHHHHHHHHhcCCcee
Q 025140 56 GKGYVDVST-VDGDTSKLINGHIKATGASFLEAPVSGS-KKPA----EDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFY 128 (257)
Q Consensus 56 g~~ivd~ST-~~p~~~~~la~~~~~~G~~~vdapV~g~-~~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~ 128 (257)
-.+.||... -+++++.++++.+++.|+.|++-|+.-. .... +.-..+|..+..-.....++++++.= .+++.
T Consensus 192 ~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-~d~v~ 269 (393)
T 4dwd_A 192 AVIGFDANNGYSVGGAIRVGRALEDLGYSWFEEPVQHYHVGAMGEVAQRLDITVSAGEQTYTLQALKDLILSG-VRMVQ 269 (393)
T ss_dssp CCEEEECTTCCCHHHHHHHHHHHHHTTCSEEECCSCTTCHHHHHHHHHHCSSEEEBCTTCCSHHHHHHHHHHT-CCEEC
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHhhCCCEEECCCCcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcC-CCEEE
Confidence 368899864 6789999999999999999999998632 1111 12234666665544456677776554 44433
No 282
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=52.65 E-value=11 Score=25.92 Aligned_cols=17 Identities=29% Similarity=0.579 Sum_probs=8.1
Q ss_pred HHHHHHHHHHcCCcEEE
Q 025140 70 SKLINGHIKATGASFLE 86 (257)
Q Consensus 70 ~~~la~~~~~~G~~~vd 86 (257)
...+.+.+.+.|+.++|
T Consensus 82 ~~~~~~~~~~~g~~~~~ 98 (118)
T 3ic5_A 82 TPIIAKAAKAAGAHYFD 98 (118)
T ss_dssp HHHHHHHHHHTTCEEEC
T ss_pred hHHHHHHHHHhCCCEEE
Confidence 34444444445555544
No 283
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=51.93 E-value=61 Score=28.26 Aligned_cols=71 Identities=10% Similarity=0.061 Sum_probs=47.0
Q ss_pred CCEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEecCCCC-hHHh----hcCceEEEecCChhHHHHHHHHHHHhcCCc
Q 025140 56 GKGYVDVS-TVDGDTSKLINGHIKATGASFLEAPVSGS-KKPA----EDGQLIFLAAGDKSLYNTVAPLLDIMGKSR 126 (257)
Q Consensus 56 g~~ivd~S-T~~p~~~~~la~~~~~~G~~~vdapV~g~-~~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~ 126 (257)
-.+.||.. .-+++++.++++.+++.|+.|++-|+.-. .... +.-..++..+..-.....++++++.=+-.+
T Consensus 200 ~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~ 276 (388)
T 3tcs_A 200 VDLLIDANSCYTPDRAIEVGHMLQDHGFCHFEEPCPYWELAQTKQVTDALDIDVTGGEQDCDLPTWQRMIDMRAVDI 276 (388)
T ss_dssp SEEEEECTTCCCHHHHHHHHHHHHHTTCCEEECCSCTTCHHHHHHHHHHCSSCEEECTTCCCHHHHHHHHHHTCCSE
T ss_pred CeEEEeCCCCcCHHHHHHHHHHHhhcCCeEEECCCCccCHHHHHHHHHhcCCCEEcCCccCCHHHHHHHHHcCCCCE
Confidence 36788986 46789999999999999999999998632 1111 122346666655444556777776433333
No 284
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=51.77 E-value=37 Score=29.54 Aligned_cols=40 Identities=8% Similarity=0.105 Sum_probs=25.3
Q ss_pred CHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCC--CEEEEcCCC
Q 025140 18 SPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPG--KGYVDVSTV 65 (257)
Q Consensus 18 s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g--~~ivd~ST~ 65 (257)
++.+ .+++|+||.|+|.....+ .. ..+. ..| ++|||.|+.
T Consensus 59 ~~~~-~~~~DvVf~a~g~~~s~~-~a---~~~~---~~G~k~vVID~ss~ 100 (367)
T 1t4b_A 59 DLEA-LKALDIIVTCQGGDYTNE-IY---PKLR---ESGWQGYWIDAASS 100 (367)
T ss_dssp CHHH-HHTCSEEEECSCHHHHHH-HH---HHHH---HTTCCCEEEECSST
T ss_pred ChHH-hcCCCEEEECCCchhHHH-HH---HHHH---HCCCCEEEEcCChh
Confidence 4555 478999999999655433 22 2222 234 489999865
No 285
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=51.34 E-value=67 Score=27.92 Aligned_cols=71 Identities=10% Similarity=-0.067 Sum_probs=46.3
Q ss_pred CCEEEEcCC-CCHHHHHHHHHHHHHcCCcEEEecCCCC-hHHh----hcCceEEEecCChhHHHHHHHHHHHhcCCc
Q 025140 56 GKGYVDVST-VDGDTSKLINGHIKATGASFLEAPVSGS-KKPA----EDGQLIFLAAGDKSLYNTVAPLLDIMGKSR 126 (257)
Q Consensus 56 g~~ivd~ST-~~p~~~~~la~~~~~~G~~~vdapV~g~-~~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~ 126 (257)
-.+.||... -+++++.++++.+++.|+.|++-|+... .... +.-..+|+.++.-...+.++++++.=..++
T Consensus 210 ~~l~vDan~~~~~~~ai~~~~~l~~~~i~~iE~P~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~ 286 (403)
T 2ox4_A 210 VDIIVENHGHTDLVSAIQFAKAIEEFNIFFYEEINTPLNPRLLKEAKKKIDIPLASGERIYSRWGFLPFLEDRSIDV 286 (403)
T ss_dssp SEEEEECTTCSCHHHHHHHHHHHGGGCEEEEECCSCTTSTHHHHHHHHTCCSCEEECTTCCHHHHHHHHHHTTCCSE
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHhhCCCEEeCCCChhhHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCE
Confidence 457888864 5789999999999999999999998532 1111 122345655555444566777775433333
No 286
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=51.33 E-value=81 Score=26.94 Aligned_cols=72 Identities=11% Similarity=0.050 Sum_probs=47.5
Q ss_pred CCEEEEcCC-CCHHHHHHHHHHHHH--cCCcEEEecCCCCh-HHh----hcCceEEEecCChhHHHHHHHHHHHhcCCce
Q 025140 56 GKGYVDVST-VDGDTSKLINGHIKA--TGASFLEAPVSGSK-KPA----EDGQLIFLAAGDKSLYNTVAPLLDIMGKSRF 127 (257)
Q Consensus 56 g~~ivd~ST-~~p~~~~~la~~~~~--~G~~~vdapV~g~~-~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~ 127 (257)
-.+.||... -+++++.++.+.+++ .|+.|++-|+...- ... +.-..+|+.++.-...+.++++++.=..+++
T Consensus 186 ~~l~vDan~~~~~~~a~~~~~~l~~~~~~i~~iEqP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v 265 (366)
T 1tkk_A 186 VKLRLDANQGWRPKEAVTAIRKMEDAGLGIELVEQPVHKDDLAGLKKVTDATDTPIMADESVFTPRQAFEVLQTRSADLI 265 (366)
T ss_dssp SEEEEECTTCSCHHHHHHHHHHHHHTTCCEEEEECCSCTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCCSEE
T ss_pred CeEEEECCCCCCHHHHHHHHHHHhhcCCCceEEECCCCcccHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHHhCCCCEE
Confidence 357889864 578999999999999 89999999984321 111 1223466666655455667777765444443
No 287
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=51.09 E-value=4.4 Score=36.63 Aligned_cols=51 Identities=10% Similarity=0.066 Sum_probs=35.9
Q ss_pred hcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCH
Q 025140 10 YSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDG 67 (257)
Q Consensus 10 ~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p 67 (257)
..|.+. .++.|+++.+|+|+++..+..- + + ...++.+++|.++||.+-...
T Consensus 288 ~~G~~v-v~LeElL~~ADIVv~atgt~~l----I-~-~e~l~~MK~GAILINvGRgdv 338 (464)
T 3n58_A 288 MDGFEV-VTLDDAASTADIVVTTTGNKDV----I-T-IDHMRKMKDMCIVGNIGHFDN 338 (464)
T ss_dssp HTTCEE-CCHHHHGGGCSEEEECCSSSSS----B-C-HHHHHHSCTTEEEEECSSSTT
T ss_pred hcCcee-ccHHHHHhhCCEEEECCCCccc----c-C-HHHHhcCCCCeEEEEcCCCCc
Confidence 346654 4789999999999998765332 1 1 123456889999999987654
No 288
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=51.08 E-value=51 Score=23.50 Aligned_cols=84 Identities=12% Similarity=0.081 Sum_probs=49.5
Q ss_pred HHhcCCEEEEecCCh------H-HHHHHhcCCCcccccCCCCCEEEEc---CCCCHHHHHHHHHHHHHcCCcEEEecCCC
Q 025140 22 VAASCDVTFAMLADP------E-SAMDVACGKHGAASGMGPGKGYVDV---STVDGDTSKLINGHIKATGASFLEAPVSG 91 (257)
Q Consensus 22 a~~~advvi~~l~~~------~-~v~~v~~~~~~~~~~l~~g~~ivd~---ST~~p~~~~~la~~~~~~G~~~vdapV~g 91 (257)
-+.++|.||+..|+. + .++..+ +.+... .+++.+.-. ........+.+.+.++++|...+..|+
T Consensus 42 ~l~~~d~iiig~pty~~g~~p~~~~~~fl---~~l~~~-l~~k~~~~f~t~g~~~~~a~~~l~~~l~~~G~~~v~~~~-- 115 (138)
T 5nul_A 42 ELLNEDILILGCSAMTDEVLEESEFEPFI---EEISTK-ISGKKVALFGSYGWGDGKWMRDFEERMNGYGCVVVETPL-- 115 (138)
T ss_dssp HHTTCSEEEEEECCBTTTBCCTTTHHHHH---HHHGGG-CTTCEEEEEEEESSSCSHHHHHHHHHHHHTTCEECSCCE--
T ss_pred HHhhCCEEEEEcCccCCCCCChHHHHHHH---HHHHhh-cCCCEEEEEEecCCCCChHHHHHHHHHHHCCCEEECCce--
Confidence 456899999998862 2 466665 222221 345443332 233357788899999999998774331
Q ss_pred ChHHhhcCceEEEecC-ChhHHHHHHHHHHHhc
Q 025140 92 SKKPAEDGQLIFLAAG-DKSLYNTVAPLLDIMG 123 (257)
Q Consensus 92 ~~~~a~~g~l~i~~gg-~~~~~~~~~~ll~~~~ 123 (257)
.+-|. +++. ++++.+-+.+.
T Consensus 116 -----------~~~~~p~~~d-~~~~~~~~~l~ 136 (138)
T 5nul_A 116 -----------IVQNEPDEAE-QDCIEFGKKIA 136 (138)
T ss_dssp -----------EEESSCGGGH-HHHHHHHHHHH
T ss_pred -----------EEecCCCHHH-HHHHHHHHHHh
Confidence 22233 3455 77776665553
No 289
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=50.99 E-value=45 Score=29.24 Aligned_cols=76 Identities=11% Similarity=0.032 Sum_probs=48.9
Q ss_pred cccCCCCCEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEecCCCChHHhh----cCceEEEecCChhHHHHHHHHHHHhcC
Q 025140 50 ASGMGPGKGYVDVS-TVDGDTSKLINGHIKATGASFLEAPVSGSKKPAE----DGQLIFLAAGDKSLYNTVAPLLDIMGK 124 (257)
Q Consensus 50 ~~~l~~g~~ivd~S-T~~p~~~~~la~~~~~~G~~~vdapV~g~~~~a~----~g~l~i~~gg~~~~~~~~~~ll~~~~~ 124 (257)
.+....-.+.||.. .-+++++.++++.+++.|+.|++-|+. ...... .-..+|..+..-.....++++++.=+.
T Consensus 207 R~~~~~~~l~vDaN~~w~~~~A~~~~~~l~~~~i~~iEqP~~-d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~ 285 (398)
T 4dye_A 207 REALPGVNLRVDPNAAWSVPDSVRAGIALEELDLEYLEDPCV-GIEGMAQVKAKVRIPLCTNMCVVRFEDFAPAMRLNAV 285 (398)
T ss_dssp HHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEECCSS-HHHHHHHHHHHCCSCEEESSSCCSGGGHHHHHHTTCC
T ss_pred HHhCCCCeEEeeCCCCCCHHHHHHHHHHHhhcCCCEEcCCCC-CHHHHHHHHhhCCCCEEeCCcCCCHHHHHHHHHhCCC
Confidence 33443346889986 467899999999999999999999998 322221 123456665544444556666654433
Q ss_pred Cc
Q 025140 125 SR 126 (257)
Q Consensus 125 ~~ 126 (257)
++
T Consensus 286 d~ 287 (398)
T 4dye_A 286 DV 287 (398)
T ss_dssp SE
T ss_pred CE
Confidence 33
No 290
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=50.94 E-value=31 Score=30.14 Aligned_cols=73 Identities=10% Similarity=0.080 Sum_probs=49.6
Q ss_pred CCEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEecCCCCh-HHh-----hcCceEEEecCChhHHHHHHHHHHHhcCCcee
Q 025140 56 GKGYVDVS-TVDGDTSKLINGHIKATGASFLEAPVSGSK-KPA-----EDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFY 128 (257)
Q Consensus 56 g~~ivd~S-T~~p~~~~~la~~~~~~G~~~vdapV~g~~-~~a-----~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~ 128 (257)
-.+.||.. .-+++++.++++.+++.|+.|++-|+...- ... +.-..+|..++.-...+.++++++.=+.+++.
T Consensus 196 ~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~~iPIa~dE~i~~~~~~~~~i~~~~~d~v~ 275 (389)
T 3ozy_A 196 VEILVDANQSLGRHDALAMLRILDEAGCYWFEEPLSIDDIEGHRILRAQGTPVRIATGENLYTRNAFNDYIRNDAIDVLQ 275 (389)
T ss_dssp SEEEEECTTCCCHHHHHHHHHHHHHTTCSEEESCSCTTCHHHHHHHHTTCCSSEEEECTTCCHHHHHHHHHHTTCCSEEC
T ss_pred ceEEEECCCCcCHHHHHHHHHHHHhcCCCEEECCCCcccHHHHHHHHhcCCCCCEEeCCCCCCHHHHHHHHHcCCCCEEE
Confidence 35788885 467899999999999999999999986321 111 22345677666655566777777654444433
No 291
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=50.71 E-value=1.1e+02 Score=26.67 Aligned_cols=70 Identities=13% Similarity=0.060 Sum_probs=45.4
Q ss_pred CCEEEEcCC-CCHHHHHHHHHHHHHcCCcEEEecCCCCh-HHh----hcCceEEEecCChhHHHHHHHHHHHhcCC
Q 025140 56 GKGYVDVST-VDGDTSKLINGHIKATGASFLEAPVSGSK-KPA----EDGQLIFLAAGDKSLYNTVAPLLDIMGKS 125 (257)
Q Consensus 56 g~~ivd~ST-~~p~~~~~la~~~~~~G~~~vdapV~g~~-~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~~~ 125 (257)
-.+.||... -+++++.++.+.+++.|+.|++-|+...- ... +.-..+|+.++.-...+.++++++.=..+
T Consensus 211 ~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d 286 (410)
T 2qq6_A 211 VEVAIDMHGRFDIPSSIRFARAMEPFGLLWLEEPTPPENLDALAEVRRSTSTPICAGENVYTRFDFRELFAKRAVD 286 (410)
T ss_dssp SEEEEECTTCCCHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCS
T ss_pred CEEEEECCCCCCHHHHHHHHHHHhhcCCCeEECCCChhhHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCC
Confidence 357888864 57899999999999999999999985421 111 12234555555444455666666543333
No 292
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=50.64 E-value=44 Score=29.19 Aligned_cols=68 Identities=10% Similarity=0.038 Sum_probs=43.9
Q ss_pred CCEEEEcCC-CCHHHHHHHHHHHHHcCCcEEEecCCCCh-HHh----hcCceEEEecCChhHHHHHHHHHHHhc
Q 025140 56 GKGYVDVST-VDGDTSKLINGHIKATGASFLEAPVSGSK-KPA----EDGQLIFLAAGDKSLYNTVAPLLDIMG 123 (257)
Q Consensus 56 g~~ivd~ST-~~p~~~~~la~~~~~~G~~~vdapV~g~~-~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~ 123 (257)
-.+.||... -+++++.++.+.+++.|+.|++-|+...- ... +.-..+|+.++.-...+.++++++.=.
T Consensus 221 ~~l~vDan~~~~~~~ai~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~ 294 (398)
T 2pp0_A 221 FPLMVDANQQWDRETAIRMGRKMEQFNLIWIEEPLDAYDIEGHAQLAAALDTPIATGEMLTSFREHEQLILGNA 294 (398)
T ss_dssp SCEEEECTTCSCHHHHHHHHHHHGGGTCSCEECCSCTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTC
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHHcCCceeeCCCChhhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCC
Confidence 468889864 57899999999999999999999985321 111 122345555554444456666665433
No 293
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=49.84 E-value=51 Score=29.25 Aligned_cols=66 Identities=11% Similarity=0.066 Sum_probs=45.4
Q ss_pred CEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEecCCCChH-Hh----hcCceEEEecCChhHHHHHHHHHHHh
Q 025140 57 KGYVDVS-TVDGDTSKLINGHIKATGASFLEAPVSGSKK-PA----EDGQLIFLAAGDKSLYNTVAPLLDIM 122 (257)
Q Consensus 57 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~vdapV~g~~~-~a----~~g~l~i~~gg~~~~~~~~~~ll~~~ 122 (257)
.+.||.. .-+++++.++++.+++.|+.|++-|+...-. .. +.-..+|..++.-.....++++++.=
T Consensus 205 ~L~vDan~~~t~~~A~~~~~~Le~~~i~~iEeP~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~g 276 (433)
T 3rcy_A 205 DLLFGTHGQFTTAGAIRLGQAIEPYSPLWYEEPVPPDNVGAMAQVARAVRIPVATGERLTTKAEFAPVLREG 276 (433)
T ss_dssp EEEECCCSCBCHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHHSSSCEEECTTCCSHHHHHHHHHTT
T ss_pred eEEEeCCCCCCHHHHHHHHHHhhhcCCCEEECCCChhhHHHHHHHHhccCCCEEecCCCCCHHHHHHHHHcC
Confidence 5788875 4678999999999999999999999863211 11 12234666666555555666776543
No 294
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=49.45 E-value=25 Score=29.60 Aligned_cols=62 Identities=13% Similarity=0.083 Sum_probs=38.5
Q ss_pred hcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCC-CHHHHHHHHHHHH
Q 025140 10 YSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTV-DGDTSKLINGHIK 78 (257)
Q Consensus 10 ~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~-~p~~~~~la~~~~ 78 (257)
..|..+.+++.++++++|+||-+.+ ++++.+.+ .-+ +..|.-+|-.||. +++...++.+.++
T Consensus 73 ~~gv~v~~dl~~ll~~aDVvIDFT~-p~a~~~~~---~~~---l~~Gv~vViGTTG~~~e~~~~L~~aa~ 135 (288)
T 3ijp_A 73 FLGVRITDDPESAFSNTEGILDFSQ-PQASVLYA---NYA---AQKSLIHIIGTTGFSKTEEAQIADFAK 135 (288)
T ss_dssp CCSCBCBSCHHHHTTSCSEEEECSC-HHHHHHHH---HHH---HHHTCEEEECCCCCCHHHHHHHHHHHT
T ss_pred cCCceeeCCHHHHhcCCCEEEEcCC-HHHHHHHH---HHH---HHcCCCEEEECCCCCHHHHHHHHHHhC
Confidence 3577788999999999999876654 55555444 222 3356666666665 4444444554443
No 295
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=49.21 E-value=60 Score=28.26 Aligned_cols=74 Identities=16% Similarity=0.225 Sum_probs=49.1
Q ss_pred CCEEEEcCCC---CHHHHHHHHHHHHHcCCcEEEecCCCCh-HH---hh--cCceEEEecCChhHHHHHHHHHHHhcCCc
Q 025140 56 GKGYVDVSTV---DGDTSKLINGHIKATGASFLEAPVSGSK-KP---AE--DGQLIFLAAGDKSLYNTVAPLLDIMGKSR 126 (257)
Q Consensus 56 g~~ivd~ST~---~p~~~~~la~~~~~~G~~~vdapV~g~~-~~---a~--~g~l~i~~gg~~~~~~~~~~ll~~~~~~~ 126 (257)
-.+.||.... +++++.++.+.+++.|+.|++-|+...- .. .. .-..+|+.++.-...+.++++++.=+.++
T Consensus 194 ~~l~vDan~~~~~~~~~a~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~ 273 (401)
T 2hzg_A 194 GDLMVDVGQIFGEDVEAAAARLPTLDAAGVLWLEEPFDAGALAAHAALAGRGARVRIAGGEAAHNFHMAQHLMDYGRIGF 273 (401)
T ss_dssp SEEEEECTTTTTTCHHHHHTTHHHHHHTTCSEEECCSCTTCHHHHHHHHTTCCSSEEEECTTCSSHHHHHHHHHHSCCSE
T ss_pred CeEEEECCCCCCCCHHHHHHHHHHHHhcCCCEEECCCCccCHHHHHHHHhhCCCCCEEecCCcCCHHHHHHHHHCCCCCE
Confidence 4688898653 6899999999999999999999985321 11 11 22456666655445667777776654444
Q ss_pred eec
Q 025140 127 FYL 129 (257)
Q Consensus 127 ~~~ 129 (257)
+.+
T Consensus 274 v~i 276 (401)
T 2hzg_A 274 IQI 276 (401)
T ss_dssp EEE
T ss_pred EEe
Confidence 433
No 296
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=48.72 E-value=44 Score=29.10 Aligned_cols=73 Identities=11% Similarity=0.079 Sum_probs=48.9
Q ss_pred CCEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEecCCCCh-HHh----hcCceEEEecCChhHHHHHHHHHHHhcCCcee
Q 025140 56 GKGYVDVS-TVDGDTSKLINGHIKATGASFLEAPVSGSK-KPA----EDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFY 128 (257)
Q Consensus 56 g~~ivd~S-T~~p~~~~~la~~~~~~G~~~vdapV~g~~-~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~ 128 (257)
-.+.||.. .-+++++.++++.+++.|+.|++-|+...- ... +.-..+|+.+..-.....++++++.=..+++.
T Consensus 214 ~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ 292 (383)
T 3toy_A 214 IALMLDFNQSLDPAEATRRIARLADYDLTWIEEPVPQENLSGHAAVRERSEIPIQAGENWWFPRGFAEAIAAGASDFIM 292 (383)
T ss_dssp SEEEEECTTCSCHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCCSEEC
T ss_pred CeEEEeCCCCCCHHHHHHHHHHHHhhCCCEEECCCCcchHHHHHHHHhhcCCCEEeCCCcCCHHHHHHHHHcCCCCEEE
Confidence 36888986 467899999999999999999999986431 111 12234666666655556677777644444433
No 297
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=48.71 E-value=11 Score=31.88 Aligned_cols=45 Identities=13% Similarity=0.021 Sum_probs=29.8
Q ss_pred ccCCHHHHHhcCCEEEEecCC---------------hHHHHHHhcCCCcccccCCCCCEEEEcCC
Q 025140 15 YQPSPDEVAASCDVTFAMLAD---------------PESAMDVACGKHGAASGMGPGKGYVDVST 64 (257)
Q Consensus 15 ~~~s~~ea~~~advvi~~l~~---------------~~~v~~v~~~~~~~~~~l~~g~~ivd~ST 64 (257)
...+. +++++||+||++++. .+..++++ +.+.+. .++.++|..|+
T Consensus 63 ~t~d~-~a~~~aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~---~~i~~~-~~~~iii~~sN 122 (317)
T 2ewd_A 63 GTDDY-ADISGSDVVIITASIPGRPKDDRSELLFGNARILDSVA---EGVKKY-CPNAFVICITN 122 (317)
T ss_dssp EESCG-GGGTTCSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHH---HHHHHH-CTTSEEEECCS
T ss_pred ECCCH-HHhCCCCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHH---HHHHHH-CCCcEEEEeCC
Confidence 33667 889999999999932 23345565 444444 35777777765
No 298
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=48.62 E-value=13 Score=32.30 Aligned_cols=97 Identities=14% Similarity=0.058 Sum_probs=50.7
Q ss_pred HHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCH-HHHHHHHHHHHHc-CC-cEEEecCCCChHH-
Q 025140 20 DEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDG-DTSKLINGHIKAT-GA-SFLEAPVSGSKKP- 95 (257)
Q Consensus 20 ~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p-~~~~~la~~~~~~-G~-~~vdapV~g~~~~- 95 (257)
.+..+++|+||.|+|.....+.+- .. ..|..+||.|.-.- +......+|.... -. .+++--+.|-|+-
T Consensus 77 ~~~~~~vDvVf~atp~~~s~~~a~-------~~-~aG~~VId~sa~~R~~~~~~y~~~y~~~~~~~~~l~~~vygvpE~n 148 (359)
T 1xyg_A 77 DADFSTVDAVFCCLPHGTTQEIIK-------EL-PTALKIVDLSADFRLRNIAEYEEWYGQPHKAVELQKEVVYGLTEIL 148 (359)
T ss_dssp GCCGGGCSEEEECCCTTTHHHHHH-------TS-CTTCEEEECSSTTTCSCHHHHHHHHSSCCSCHHHHTTCEECCHHHH
T ss_pred hhHhcCCCEEEEcCCchhHHHHHH-------HH-hCCCEEEECCccccCCchhhhhhhhcCCcCChhhcCCceEECCccC
Confidence 444568999999999877655442 23 56889999998431 1111223344321 00 1122224454332
Q ss_pred ---hhcCceEEEecCCh-hHHHHHHHHHHHhcC
Q 025140 96 ---AEDGQLIFLAAGDK-SLYNTVAPLLDIMGK 124 (257)
Q Consensus 96 ---a~~g~l~i~~gg~~-~~~~~~~~ll~~~~~ 124 (257)
.....+.--.||.. ...-.+.|+.+.++-
T Consensus 149 ~~~i~~~~iIanpgC~tt~~~~~l~pL~~~~~i 181 (359)
T 1xyg_A 149 REDIKKARLVANPGCYPTTIQLPLVPLLKANLI 181 (359)
T ss_dssp HHHHHTCSEEECCCHHHHHHHHHHHHHHHTTCB
T ss_pred HHHhccCCEEECCCcHHHHHHHHHHHHHHcCCC
Confidence 23344444445543 334456777776543
No 299
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=48.58 E-value=6.4 Score=34.47 Aligned_cols=37 Identities=19% Similarity=0.109 Sum_probs=24.8
Q ss_pred HHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCC
Q 025140 22 VAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTV 65 (257)
Q Consensus 22 a~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~ 65 (257)
..+++|+||.|+|...+.+-+ ..+ +..|..+||.|+-
T Consensus 61 ~~~~~Dvvf~a~~~~~s~~~a----~~~---~~~G~~vIDlSa~ 97 (366)
T 3pwk_A 61 AFEGVDIALFSAGSSTSAKYA----PYA---VKAGVVVVDNTSY 97 (366)
T ss_dssp TTTTCSEEEECSCHHHHHHHH----HHH---HHTTCEEEECSST
T ss_pred HhcCCCEEEECCChHhHHHHH----HHH---HHCCCEEEEcCCc
Confidence 357899999999865544322 122 3467789999974
No 300
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=48.38 E-value=9.3 Score=33.37 Aligned_cols=46 Identities=17% Similarity=0.278 Sum_probs=30.1
Q ss_pred CCHHHHHhcCCEEEEecCChHH-HHHHhcCCCcccccCCCCCEEEEcCC
Q 025140 17 PSPDEVAASCDVTFAMLADPES-AMDVACGKHGAASGMGPGKGYVDVST 64 (257)
Q Consensus 17 ~s~~ea~~~advvi~~l~~~~~-v~~v~~~~~~~~~~l~~g~~ivd~ST 64 (257)
.++.+.++++|+||.|++.+.. ...++ . +..++.+.+|.+|||.+.
T Consensus 223 ~~l~~~l~~aDvVi~~~~~p~~~t~~li-~-~~~l~~mk~g~~iV~va~ 269 (377)
T 2vhw_A 223 YELEGAVKRADLVIGAVLVPGAKAPKLV-S-NSLVAHMKPGAVLVDIAI 269 (377)
T ss_dssp HHHHHHHHHCSEEEECCCCTTSCCCCCB-C-HHHHTTSCTTCEEEEGGG
T ss_pred HHHHHHHcCCCEEEECCCcCCCCCccee-c-HHHHhcCCCCcEEEEEec
Confidence 3567888899999999865542 11111 0 223456778999999983
No 301
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=48.37 E-value=61 Score=28.13 Aligned_cols=80 Identities=11% Similarity=0.085 Sum_probs=52.2
Q ss_pred ccccCCC-CCEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEecCCCChH-Hh----hcCceEEEecCChhHHHHHHHHHHH
Q 025140 49 AASGMGP-GKGYVDVS-TVDGDTSKLINGHIKATGASFLEAPVSGSKK-PA----EDGQLIFLAAGDKSLYNTVAPLLDI 121 (257)
Q Consensus 49 ~~~~l~~-g~~ivd~S-T~~p~~~~~la~~~~~~G~~~vdapV~g~~~-~a----~~g~l~i~~gg~~~~~~~~~~ll~~ 121 (257)
+.+...+ -.+.||.. .-+++++.++++.+++.|+.|++-|+...-. .. +.-..+|+.++.-.....++++++.
T Consensus 187 vR~a~g~~~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ 266 (383)
T 3i4k_A 187 LAREVGDRVSLRIDINARWDRRTALHYLPILAEAGVELFEQPTPADDLETLREITRRTNVSVMADESVWTPAEALAVVKA 266 (383)
T ss_dssp HHHTTTTTSEEEEECTTCSCHHHHHHHHHHHHHTTCCEEESCSCTTCHHHHHHHHHHHCCEEEESTTCSSHHHHHHHHHH
T ss_pred HHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCCChhhHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHc
Confidence 3344433 35888986 4678999999999999999999999864311 11 1123567776655556677777765
Q ss_pred hcCCcee
Q 025140 122 MGKSRFY 128 (257)
Q Consensus 122 ~~~~~~~ 128 (257)
=..+++.
T Consensus 267 ~~~d~v~ 273 (383)
T 3i4k_A 267 QAADVIA 273 (383)
T ss_dssp TCCSEEE
T ss_pred CCCCEEE
Confidence 4444433
No 302
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=47.88 E-value=24 Score=29.98 Aligned_cols=54 Identities=13% Similarity=0.041 Sum_probs=32.7
Q ss_pred cCCHHHHHhcCCEEEEecCCh--------------------HHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHH
Q 025140 16 QPSPDEVAASCDVTFAMLADP--------------------ESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLING 75 (257)
Q Consensus 16 ~~s~~ea~~~advvi~~l~~~--------------------~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~ 75 (257)
..+. +++++||+||++++.+ ..++++. +.+.+.. +..++|.. |++.+..-.++.
T Consensus 64 t~d~-~al~~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~---~~i~~~~-p~a~iiv~-tNP~~~~t~~~~ 137 (322)
T 1t2d_A 64 SNTY-DDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIG---GHIKKNC-PNAFIIVV-TNPVDVMVQLLH 137 (322)
T ss_dssp ECCG-GGGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHH---HHHHHHC-TTSEEEEC-SSSHHHHHHHHH
T ss_pred CCCH-HHhCCCCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHH---HHHHHHC-CCeEEEEe-cCChHHHHHHHH
Confidence 3677 8899999999998433 1244444 3344433 56666654 556666544443
No 303
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=47.84 E-value=28 Score=30.13 Aligned_cols=114 Identities=9% Similarity=0.022 Sum_probs=66.2
Q ss_pred cCccccCCHHHHHh-cCCEEEEecCCh-----HHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcE
Q 025140 11 SRCRYQPSPDEVAA-SCDVTFAMLADP-----ESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASF 84 (257)
Q Consensus 11 ~Ga~~~~s~~ea~~-~advvi~~l~~~-----~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ 84 (257)
.|.....|+.|+++ ++|++|+.+.+. +..++. +.+++..|.-||+..-..-..-.++.+.+++ |+.+
T Consensus 58 ~gipi~~~l~~al~~~~d~lvig~a~~gG~l~~~~~~~------i~~Al~~G~~Vvsglh~~l~~~pel~~~A~~-g~~i 130 (349)
T 2obn_A 58 RYVPIVKSVEAALEYKPQVLVIGIAPKGGGIPDDYWIE------LKTALQAGMSLVNGLHTPLANIPDLNALLQP-GQLI 130 (349)
T ss_dssp SCCCEESSHHHHGGGCCSEEEECCCCCCC-SCGGGHHH------HHHHHHTTCEEEECSSSCCTTCHHHHHHCCT-TCCE
T ss_pred CCCCccCCHHHHHhCCCCEEEEEecCCCCCCCHHHHHH------HHHHHHcCCcEEeCccchhhCCHHHHHHHHc-CCEE
Confidence 46778899999985 689999987432 222222 2344556666666654332323346666777 9999
Q ss_pred EEecCC-------CChHHhhcCceEEEecCChhHHH-----HHHHHHHHhcCCceecCC
Q 025140 85 LEAPVS-------GSKKPAEDGQLIFLAAGDKSLYN-----TVAPLLDIMGKSRFYLGD 131 (257)
Q Consensus 85 vdapV~-------g~~~~a~~g~l~i~~gg~~~~~~-----~~~~ll~~~~~~~~~~G~ 131 (257)
.|.-+- .+....-..+-.+.+|.|-++=+ .+...++.-|-+..++++
T Consensus 131 ~dvr~pp~~l~~~~g~~~~v~~k~i~v~GTD~~VGK~~ts~~L~~~l~~~G~~a~~~~t 189 (349)
T 2obn_A 131 WDVRKEPANLDVASGAARTLPCRRVLTVGTDMAIGKMSTSLELHWAAKLRGWRSKFLAT 189 (349)
T ss_dssp EETTCCCSSCCCCCSGGGGCSSEEEEEEESSSSSSHHHHHHHHHHHHHHTTCCEEEECC
T ss_pred EEeccCcccccccccceeeecceEEEEcCCCccccceeHHHHHHHHHHhcCCcEEEEec
Confidence 987432 22222223454566665544422 344555666777767654
No 304
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=47.73 E-value=70 Score=27.56 Aligned_cols=98 Identities=11% Similarity=0.013 Sum_probs=60.9
Q ss_pred CCEEEEecC-ChHHHHHHhcCCCcccccCC-CCCEEEEcCC-CCHHHHHHHHHHHHHcCCcEEEecCCCChHHh----hc
Q 025140 26 CDVTFAMLA-DPESAMDVACGKHGAASGMG-PGKGYVDVST-VDGDTSKLINGHIKATGASFLEAPVSGSKKPA----ED 98 (257)
Q Consensus 26 advvi~~l~-~~~~v~~v~~~~~~~~~~l~-~g~~ivd~ST-~~p~~~~~la~~~~~~G~~~vdapV~g~~~~a----~~ 98 (257)
-+.|=+-+. +.....+++ +.+.+... .-.+.||... -+++++.++++.+++.|+ |++-|+. ..... +.
T Consensus 161 f~~iKik~g~~~~~~~e~v---~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i-~iE~P~~-~~~~~~~l~~~ 235 (379)
T 2rdx_A 161 YRQFQIKVGADWQSDIDRI---RACLPLLEPGEKAMADANQGWRVDNAIRLARATRDLDY-ILEQPCR-SYEECQQVRRV 235 (379)
T ss_dssp CCEEEEECCSCHHHHHHHH---HHHGGGSCTTCEEEEECTTCSCHHHHHHHHHHTTTSCC-EEECCSS-SHHHHHHHHTT
T ss_pred CCEEEEeccCCHHHHHHHH---HHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhCCe-EEeCCcC-CHHHHHHHHhh
Confidence 355555444 233333444 33444443 3457888863 578999999999999999 9999987 43332 12
Q ss_pred CceEEEecCChhHHHHHHHHHHHhcCCcee
Q 025140 99 GQLIFLAAGDKSLYNTVAPLLDIMGKSRFY 128 (257)
Q Consensus 99 g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~ 128 (257)
-..+++.++.-...+.++.+++.=..+++.
T Consensus 236 ~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ 265 (379)
T 2rdx_A 236 ADQPMKLDECVTGLHMAQRIVADRGAEICC 265 (379)
T ss_dssp CCSCEEECTTCCSHHHHHHHHHHTCCSEEE
T ss_pred CCCCEEEeCCcCCHHHHHHHHHcCCCCEEE
Confidence 245677776655566788887765444443
No 305
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=47.67 E-value=28 Score=29.44 Aligned_cols=53 Identities=13% Similarity=0.141 Sum_probs=32.4
Q ss_pred CCHHHHHhcCCEEEEecCCh---------------HHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHH
Q 025140 17 PSPDEVAASCDVTFAMLADP---------------ESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLIN 74 (257)
Q Consensus 17 ~s~~ea~~~advvi~~l~~~---------------~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la 74 (257)
+++++++++||+||++...+ ..++++. +.+.+.. +...+|.. |.+.+..--++
T Consensus 60 ~d~~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~---~~i~~~~-p~a~viv~-sNPv~~~~~i~ 127 (314)
T 1mld_A 60 EQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLT---AACAQHC-PDAMICII-SNPVNSTIPIT 127 (314)
T ss_dssp GGHHHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHH---HHHHHHC-TTSEEEEC-SSCHHHHHHHH
T ss_pred CCHHHHhCCCCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHH---HHHHhhC-CCeEEEEE-CCCcchhHHHH
Confidence 46888999999999998543 2244444 3344433 44455554 66666655443
No 306
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=47.07 E-value=44 Score=29.29 Aligned_cols=72 Identities=11% Similarity=-0.029 Sum_probs=49.4
Q ss_pred CEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEecCCCC-hHH----hhcCceEEEecCChhHHHHHHHHHHHhcCCcee
Q 025140 57 KGYVDVS-TVDGDTSKLINGHIKATGASFLEAPVSGS-KKP----AEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFY 128 (257)
Q Consensus 57 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~vdapV~g~-~~~----a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~ 128 (257)
.+.||.+ .-+++++.++++++++.|+.|++-|+... ... .+.-..+++.+..-.....++++++.=.-.++.
T Consensus 212 ~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~d~v~ 289 (400)
T 4dxk_A 212 DIMVEFHSMWQLLPAMQIAKALTPYQTFWHEDPIKMDSLSSLTRYAAVSPAPISASETLGSRWAFRDLLETGAAGVVM 289 (400)
T ss_dssp EEEEECTTCBCHHHHHHHHHHTGGGCCSEEECCBCTTSGGGHHHHHHHCSSCEEECTTCCHHHHHHHHHHTTCCCEEE
T ss_pred eEEEECCCCCCHHHHHHHHHHHhhcCCCEEEcCCCcccHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEE
Confidence 5888986 46789999999999999999999998632 111 122245777776655566777777644334433
No 307
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=47.03 E-value=1.3e+02 Score=25.74 Aligned_cols=70 Identities=20% Similarity=0.216 Sum_probs=46.9
Q ss_pred CEEEEcCC-CCHHHHHHHHHHHHHcCCcEEEecCCCCh-HHh----hcCceEEEecCChhHHHHHHHHHHHhcCCc
Q 025140 57 KGYVDVST-VDGDTSKLINGHIKATGASFLEAPVSGSK-KPA----EDGQLIFLAAGDKSLYNTVAPLLDIMGKSR 126 (257)
Q Consensus 57 ~~ivd~ST-~~p~~~~~la~~~~~~G~~~vdapV~g~~-~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~ 126 (257)
.+.||... -+++++.++.+.+++.|+.|++-|+...- ... +.-..+|+.++.-...+.++++++.=..++
T Consensus 190 ~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP~~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~ 265 (370)
T 1nu5_A 190 SVRVDVNQGWDEQTASIWIPRLEEAGVELVEQPVPRANFGALRRLTEQNGVAILADESLSSLSSAFELARDHAVDA 265 (370)
T ss_dssp EEEEECTTCCCHHHHHHHHHHHHHHTCCEEECCSCTTCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHTTCCSE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhcCcceEeCCCCcccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCE
Confidence 47888754 57899999999999999999999985321 111 122456666665555566777776544333
No 308
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=47.02 E-value=16 Score=30.90 Aligned_cols=52 Identities=15% Similarity=0.068 Sum_probs=31.8
Q ss_pred HHHHhcCCEEEEecCChH---------------HHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHH
Q 025140 20 DEVAASCDVTFAMLADPE---------------SAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGH 76 (257)
Q Consensus 20 ~ea~~~advvi~~l~~~~---------------~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~ 76 (257)
.+++++||+||++++.+. .+++++ +.+.+. .+..++|.. |.+.+..-.+...
T Consensus 62 ~~~~~~aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~---~~i~~~-~~~~~ii~~-tNp~~~~~~~~~~ 128 (319)
T 1a5z_A 62 YADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIA---RNVSKY-APDSIVIVV-TNPVDVLTYFFLK 128 (319)
T ss_dssp GGGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHH---HHHHHH-CTTCEEEEC-SSSHHHHHHHHHH
T ss_pred HHHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHH---HHHHhh-CCCeEEEEe-CCcHHHHHHHHHH
Confidence 567899999999999743 234554 344443 355555554 6666665444433
No 309
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=46.53 E-value=28 Score=31.57 Aligned_cols=67 Identities=9% Similarity=-0.028 Sum_probs=41.9
Q ss_pred ccccCCHHHHH---hcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEE
Q 025140 13 CRYQPSPDEVA---ASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 13 a~~~~s~~ea~---~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~v 85 (257)
..+..+..++. ...|+.|+++|.......+. +..+.-.+ +||-.+-.+...-+++.+.++++|.+++
T Consensus 21 ~Pv~~~~~~~~~~p~~~DlavI~vPa~~v~~~v~----e~~~~Gv~--~viis~Gf~~~~~~~l~~~A~~~g~rli 90 (480)
T 3dmy_A 21 LTQVRRWDSACQKLPDANLALISVAGEYAAELAN----QALDRNLN--VMMFSDNVTLEDEIQLKTRAREKGLLVM 90 (480)
T ss_dssp CEEESSHHHHHHHSTTCCEEEECSCHHHHHHHHH----HHHHTTCE--EEECCCCCCHHHHHHHHHHHHHTTCCEE
T ss_pred CcccchHHHHHhcCCCCCEEEEecCHHHHHHHHH----HHHhcCCC--EEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 34455555554 46899999999755544333 33332222 5555555666666778888888888765
No 310
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=46.46 E-value=26 Score=29.89 Aligned_cols=55 Identities=16% Similarity=0.010 Sum_probs=32.1
Q ss_pred cccCCHHHHHhcCCEEEEecCChH---------------HHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHH
Q 025140 14 RYQPSPDEVAASCDVTFAMLADPE---------------SAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLIN 74 (257)
Q Consensus 14 ~~~~s~~ea~~~advvi~~l~~~~---------------~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la 74 (257)
+...+. +++++||+||++++.+. ..+++. +.+.+.. +..++|.. |.+.+..-.++
T Consensus 72 ~~t~d~-~al~~aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~---~~i~~~~-p~a~viv~-tNP~~~~t~~~ 141 (328)
T 2hjr_A 72 FGENNY-EYLQNSDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVA---ENVGKYC-PNAFVICI-TNPLDAMVYYF 141 (328)
T ss_dssp EEESCG-GGGTTCSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHH---HHHHHHC-TTCEEEEC-CSSHHHHHHHH
T ss_pred EECCCH-HHHCCCCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHH---HHHHHHC-CCeEEEEe-cCchHHHHHHH
Confidence 334677 88999999999984432 244444 3344433 56666655 44555443333
No 311
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=46.10 E-value=7.8 Score=32.35 Aligned_cols=57 Identities=14% Similarity=0.071 Sum_probs=37.0
Q ss_pred hcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCc-EEE
Q 025140 24 ASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGAS-FLE 86 (257)
Q Consensus 24 ~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~-~vd 86 (257)
.++|+||.+.|..-.-...... .+.+.++.+++|+...+..| + +.++++++|+. .+|
T Consensus 180 ~~~DivInaTp~gm~~~~~~i~----~~~l~~~~~V~DlvY~P~~T-~-ll~~A~~~G~~~~~~ 237 (272)
T 3pwz_A 180 QSFDIVVNATSASLTADLPPLP----ADVLGEAALAYELAYGKGLT-P-FLRLAREQGQARLAD 237 (272)
T ss_dssp CCCSEEEECSSGGGGTCCCCCC----GGGGTTCSEEEESSCSCCSC-H-HHHHHHHHSCCEEEC
T ss_pred cCCCEEEECCCCCCCCCCCCCC----HHHhCcCCEEEEeecCCCCC-H-HHHHHHHCCCCEEEC
Confidence 6799999999875421100010 12356889999999885444 3 66678888986 544
No 312
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=45.81 E-value=5.6 Score=34.22 Aligned_cols=41 Identities=7% Similarity=0.038 Sum_probs=30.4
Q ss_pred CCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCC
Q 025140 17 PSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTV 65 (257)
Q Consensus 17 ~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~ 65 (257)
.++.+.++++|+||++++.+.- ++ .. +.+.+|.++||.+..
T Consensus 237 ~~L~e~l~~ADIVIsAtg~p~~---vI-~~----e~vk~GavVIDVgi~ 277 (320)
T 1edz_A 237 DLLKKCSLDSDVVITGVPSENY---KF-PT----EYIKEGAVCINFACT 277 (320)
T ss_dssp HHHHHHHHHCSEEEECCCCTTC---CB-CT----TTSCTTEEEEECSSS
T ss_pred hHHHHHhccCCEEEECCCCCcc---ee-CH----HHcCCCeEEEEcCCC
Confidence 5688999999999999998652 12 11 124688999999875
No 313
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=45.78 E-value=5.7 Score=34.80 Aligned_cols=44 Identities=16% Similarity=0.174 Sum_probs=27.4
Q ss_pred HHHHHhcCCEEEEecCChHH-HHHHhcCCCcccccCCCCCEEEEcCC
Q 025140 19 PDEVAASCDVTFAMLADPES-AMDVACGKHGAASGMGPGKGYVDVST 64 (257)
Q Consensus 19 ~~ea~~~advvi~~l~~~~~-v~~v~~~~~~~~~~l~~g~~ivd~ST 64 (257)
+.+.++++|+||.|++.+.. ...++ . +..++.+.+|.+|||++.
T Consensus 251 l~~~~~~aDvVi~~~~~pg~~~~~li-~-~~~l~~mk~g~vivdva~ 295 (384)
T 1l7d_A 251 VLKELVKTDIAITTALIPGKPAPVLI-T-EEMVTKMKPGSVIIDLAV 295 (384)
T ss_dssp HHHHHTTCSEEEECCCCTTSCCCCCS-C-HHHHTTSCTTCEEEETTG
T ss_pred HHHHhCCCCEEEECCccCCCCCCeee-C-HHHHhcCCCCCEEEEEec
Confidence 66788899999999833210 00011 0 123355778999999984
No 314
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=45.63 E-value=35 Score=29.75 Aligned_cols=67 Identities=10% Similarity=-0.103 Sum_probs=46.1
Q ss_pred CCEEEEcCC-CCHHHHHHHHHHHHHcCCcEEEecCCCCh-HHh----hcCceEEEecCChhHHHHHHHHHHHh
Q 025140 56 GKGYVDVST-VDGDTSKLINGHIKATGASFLEAPVSGSK-KPA----EDGQLIFLAAGDKSLYNTVAPLLDIM 122 (257)
Q Consensus 56 g~~ivd~ST-~~p~~~~~la~~~~~~G~~~vdapV~g~~-~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~ 122 (257)
-.+.||... -+++++.++++.+++.|+.|++-|+.-.- ... +.-..+|+.++.-...+.++.+++.=
T Consensus 211 ~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~ 283 (392)
T 1tzz_A 211 AQLAVDANGRFNLETGIAYAKMLRDYPLFWYEEVGDPLDYALQAALAEFYPGPMATGENLFSHQDARNLLRYG 283 (392)
T ss_dssp CEEEEECTTCCCHHHHHHHHHHHTTSCCSEEECCSCTTCHHHHHHHTTTCCSCEEECTTCCSHHHHHHHHHHS
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHHcCCCeecCCCChhhHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcC
Confidence 457889863 57899999999999999999999986321 111 12234666666544556777777653
No 315
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=45.27 E-value=76 Score=27.51 Aligned_cols=77 Identities=12% Similarity=-0.051 Sum_probs=49.3
Q ss_pred ccCCCCCEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEecCCCC-hHHh----hcCceEEEecCChhHHHHHHHHHHHhcC
Q 025140 51 SGMGPGKGYVDVS-TVDGDTSKLINGHIKATGASFLEAPVSGS-KKPA----EDGQLIFLAAGDKSLYNTVAPLLDIMGK 124 (257)
Q Consensus 51 ~~l~~g~~ivd~S-T~~p~~~~~la~~~~~~G~~~vdapV~g~-~~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~~ 124 (257)
+....-.+.||.. .-+++++.++.+.+++.|+.|++-|+... .... +.-..+|..+..-.....++++++.=+.
T Consensus 188 ~a~~~~~l~vDan~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~ 267 (385)
T 3i6e_A 188 RDFPEFRVRVDYNQGLEIDEAVPRVLDVAQFQPDFIEQPVRAHHFELMARLRGLTDVPLLADESVYGPEDMVRAAHEGIC 267 (385)
T ss_dssp HHCTTSEEEEECTTCCCGGGHHHHHHHHHTTCCSCEECCSCTTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCC
T ss_pred HhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCCCcccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHcCCC
Confidence 3343336889986 35688999999999999999999998642 1111 1223466666554445566777765444
Q ss_pred Cce
Q 025140 125 SRF 127 (257)
Q Consensus 125 ~~~ 127 (257)
+++
T Consensus 268 d~v 270 (385)
T 3i6e_A 268 DGV 270 (385)
T ss_dssp SEE
T ss_pred CEE
Confidence 443
No 316
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=45.19 E-value=13 Score=32.02 Aligned_cols=50 Identities=8% Similarity=0.007 Sum_probs=32.9
Q ss_pred cCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCH
Q 025140 11 SRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDG 67 (257)
Q Consensus 11 ~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p 67 (257)
.+..+..++.++..++|+||.|.|.....+.+- .. +..|+.+||.+...+
T Consensus 64 ~~l~v~~~~~~~~~~vDvV~~atp~~~~~~~a~----~~---l~aG~~VId~sp~~~ 113 (337)
T 1cf2_P 64 AGIEVAGTVDDMLDEADIVIDCTPEGIGAKNLK----MY---KEKGIKAIFQGGEKH 113 (337)
T ss_dssp TTCCCCEEHHHHHHTCSEEEECCSTTHHHHHHH----HH---HHHTCCEEECTTSCH
T ss_pred CceEEcCCHHHHhcCCCEEEECCCchhhHHHHH----HH---HHcCCEEEEecCCCC
Confidence 344445577888889999999999876544331 22 234566888877643
No 317
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=45.17 E-value=42 Score=29.42 Aligned_cols=67 Identities=7% Similarity=-0.076 Sum_probs=46.7
Q ss_pred CCEEEEcCC-CCHHHHHHHHHHHHHcCCcEEEecCCCC-hHHh----hcCceEEEecCChhHHHHHHHHHHHh
Q 025140 56 GKGYVDVST-VDGDTSKLINGHIKATGASFLEAPVSGS-KKPA----EDGQLIFLAAGDKSLYNTVAPLLDIM 122 (257)
Q Consensus 56 g~~ivd~ST-~~p~~~~~la~~~~~~G~~~vdapV~g~-~~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~ 122 (257)
-.+.||... -+++++.++++.+++.|+.|++-|+... .... +.-..+|+.++.-.....++++++.=
T Consensus 202 ~~l~vDan~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~ 274 (401)
T 3sbf_A 202 FHILHDVHERLFPNQAIQFAKEVEQYKPYFIEDILPPNQTEWLDNIRSQSSVSLGLGELFNNPEEWKSLIANR 274 (401)
T ss_dssp SEEEEECTTCSCHHHHHHHHHHHGGGCCSCEECSSCTTCGGGHHHHHTTCCCCEEECTTCCSHHHHHHHHHTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCCChhHHHHHHHHHhhCCCCEEeCCccCCHHHHHHHHhcC
Confidence 368889864 6789999999999999999999998532 1111 22235677766555566677777543
No 318
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=45.09 E-value=9.8 Score=32.99 Aligned_cols=37 Identities=14% Similarity=0.132 Sum_probs=25.5
Q ss_pred HHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCC
Q 025140 22 VAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTV 65 (257)
Q Consensus 22 a~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~ 65 (257)
..+++|+||.|+|...+-+.+ ..+ +..|..+||.|+-
T Consensus 60 ~~~~~Dvvf~a~~~~~s~~~a----~~~---~~~G~~vID~Sa~ 96 (344)
T 3tz6_A 60 DPSGLDIALFSAGSAMSKVQA----PRF---AAAGVTVIDNSSA 96 (344)
T ss_dssp CCTTCSEEEECSCHHHHHHHH----HHH---HHTTCEEEECSST
T ss_pred HhccCCEEEECCChHHHHHHH----HHH---HhCCCEEEECCCc
Confidence 457899999999976554322 122 3467899999974
No 319
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=45.06 E-value=32 Score=30.13 Aligned_cols=70 Identities=13% Similarity=-0.048 Sum_probs=47.0
Q ss_pred CEEEEcCC-C-CHHHHHHHHHHHHHcCCcEEEecCCCChH-Hh----hcCceEEEecCChhHHHHHHHHHHHhcCCc
Q 025140 57 KGYVDVST-V-DGDTSKLINGHIKATGASFLEAPVSGSKK-PA----EDGQLIFLAAGDKSLYNTVAPLLDIMGKSR 126 (257)
Q Consensus 57 ~~ivd~ST-~-~p~~~~~la~~~~~~G~~~vdapV~g~~~-~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~ 126 (257)
.+.||... - +++++.++++++++.|+.|++-|+...-. .. +.-..+|+.++.-.....++++++.=.-.+
T Consensus 207 ~l~vDaN~~~~~~~~A~~~~~~L~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~ 283 (394)
T 3mkc_A 207 DMMVDYLYRFTDWYEVARLLNSIEDLELYFAEATLQHDDLSGHAKLVENTRSRICGAEMSTTRFEAEEWITKGKVHL 283 (394)
T ss_dssp EEEEECTTCCCCHHHHHHHHHHTGGGCCSEEESCSCTTCHHHHHHHHHHCSSCBEECTTCCHHHHHHHHHHTTCCSE
T ss_pred eEEEeCCCCCCCHHHHHHHHHHhhhcCCeEEECCCCchhHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCe
Confidence 57889864 3 68999999999999999999999863211 11 122346666665555566777776433333
No 320
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=44.71 E-value=13 Score=30.66 Aligned_cols=55 Identities=15% Similarity=0.087 Sum_probs=36.4
Q ss_pred hcCCEEEEecCChHHHHHHhcCCCccc-ccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCc-EE
Q 025140 24 ASCDVTFAMLADPESAMDVACGKHGAA-SGMGPGKGYVDVSTVDGDTSKLINGHIKATGAS-FL 85 (257)
Q Consensus 24 ~~advvi~~l~~~~~v~~v~~~~~~~~-~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~-~v 85 (257)
.++|+||.|++.... .++ ..+- ..+.++.+++|+++.+ ..++ +.++++++|+. .+
T Consensus 179 ~~~DivVn~t~~~~~-~~~----~~i~~~~l~~~~~v~D~~y~p-~~t~-~~~~a~~~G~~~~~ 235 (271)
T 1nyt_A 179 HEFDLIINATSSGIS-GDI----PAIPSSLIHPGIYCYDMFYQK-GKTP-FLAWCEQRGSKRNA 235 (271)
T ss_dssp CCCSEEEECCSCGGG-TCC----CCCCGGGCCTTCEEEESCCCS-SCCH-HHHHHHHTTCCEEE
T ss_pred CCCCEEEECCCCCCC-CCC----CCCCHHHcCCCCEEEEeccCC-cCCH-HHHHHHHcCCCeec
Confidence 489999999997653 111 0111 1246889999999975 4343 55778888987 44
No 321
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=44.61 E-value=84 Score=27.02 Aligned_cols=76 Identities=11% Similarity=0.009 Sum_probs=48.2
Q ss_pred CCCCCEEEEcC-CCCHHHHHHHHHHH--HHcCCcEEEecCCCCh-HHh----hcCceEEEecCChhHHHHHHHHHHHhcC
Q 025140 53 MGPGKGYVDVS-TVDGDTSKLINGHI--KATGASFLEAPVSGSK-KPA----EDGQLIFLAAGDKSLYNTVAPLLDIMGK 124 (257)
Q Consensus 53 l~~g~~ivd~S-T~~p~~~~~la~~~--~~~G~~~vdapV~g~~-~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~~ 124 (257)
...-.+.||.. .-+++++.++.+.+ ++.++.|++-|+...- ... +.-..+|..+-.-.....++++++.=+.
T Consensus 185 ~~~~~l~vDaN~~~~~~~A~~~~~~L~~~~~~i~~iEeP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~ 264 (365)
T 3ik4_A 185 APTAPLIVDGNCGYDVERALAFCAACKAESIPMVLFEQPLPREDWAGMAQVTAQSGFAVAADESARSAHDVLRIAREGTA 264 (365)
T ss_dssp SSSCCEEEECTTCCCHHHHHHHHHHHHHTTCCEEEEECCSCTTCHHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHHTCC
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHHhhCCCCceEEECCCCcccHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHhCCC
Confidence 33457899986 46789999999999 7788999999986321 111 1223455555444445566666665444
Q ss_pred Ccee
Q 025140 125 SRFY 128 (257)
Q Consensus 125 ~~~~ 128 (257)
+++.
T Consensus 265 d~v~ 268 (365)
T 3ik4_A 265 SVIN 268 (365)
T ss_dssp SEEE
T ss_pred CEEE
Confidence 4443
No 322
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=44.59 E-value=15 Score=30.60 Aligned_cols=31 Identities=26% Similarity=0.307 Sum_probs=16.7
Q ss_pred CccccCCHHHHHhcCCEEEEecCChHHHHHHh
Q 025140 12 RCRYQPSPDEVAASCDVTFAMLADPESAMDVA 43 (257)
Q Consensus 12 Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~ 43 (257)
|....+++.++++++|+||-+. .|+.+.+.+
T Consensus 59 ~v~~~~dl~~~l~~~DvVIDft-~p~~~~~~~ 89 (273)
T 1dih_A 59 GVTVQSSLDAVKDDFDVFIDFT-RPEGTLNHL 89 (273)
T ss_dssp SCCEESCSTTTTTSCSEEEECS-CHHHHHHHH
T ss_pred CceecCCHHHHhcCCCEEEEcC-ChHHHHHHH
Confidence 3344556666666777777333 244444443
No 323
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=44.55 E-value=3.4 Score=36.26 Aligned_cols=64 Identities=9% Similarity=0.074 Sum_probs=37.2
Q ss_pred CccccCCHHHHHh-cCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEE
Q 025140 12 RCRYQPSPDEVAA-SCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 12 Ga~~~~s~~ea~~-~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~v 85 (257)
|++..+ ..++.. +||+++.|... .++.. ..++.+ +..+|..++..|.+.++..+.++++|+.|+
T Consensus 217 ga~~v~-~~~ll~~~~DIvip~a~~-----~~I~~--~~~~~l--g~~iV~e~An~p~t~~ea~~~L~~~Gi~~~ 281 (364)
T 1leh_A 217 GADAVA-PNAIYGVTCDIFAPCALG-----AVLND--FTIPQL--KAKVIAGSADNQLKDPRHGKYLHELGIVYA 281 (364)
T ss_dssp CCEECC-GGGTTTCCCSEEEECSCS-----CCBST--THHHHC--CCSEECCSCSCCBSSHHHHHHHHHHTCEEC
T ss_pred CCEEEC-hHHHhccCCcEeeccchH-----HHhCH--HHHHhC--CCcEEEeCCCCCcccHHHHHHHHhCCCEEe
Confidence 666553 344443 89999988532 23321 123334 334555566667665567788888897553
No 324
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=44.41 E-value=1.4e+02 Score=25.12 Aligned_cols=97 Identities=16% Similarity=0.093 Sum_probs=58.3
Q ss_pred CCEEEEcCC-CCHHHHHHHHHHHHHcCCc--EEEecCCCCh-HHh----hcCceEEEecCChhHHHHHHHHHHHhcCCce
Q 025140 56 GKGYVDVST-VDGDTSKLINGHIKATGAS--FLEAPVSGSK-KPA----EDGQLIFLAAGDKSLYNTVAPLLDIMGKSRF 127 (257)
Q Consensus 56 g~~ivd~ST-~~p~~~~~la~~~~~~G~~--~vdapV~g~~-~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~ 127 (257)
-.+.||... -+++++.++.+.+++.|+. |++-|+...- ... +.-..+|+.++.-...+.++++++.=.-+++
T Consensus 183 ~~l~vDan~~~~~~~a~~~~~~l~~~~i~~~~iE~P~~~~~~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~~~d~v 262 (345)
T 2zad_A 183 AKYIVDANMGYTQKEAVEFARAVYQKGIDIAVYEQPVRREDIEGLKFVRFHSPFPVAADESARTKFDVMRLVKEEAVDYV 262 (345)
T ss_dssp CEEEEECTTCSCHHHHHHHHHHHHHTTCCCSEEECCSCTTCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHHTCCSEE
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHhcCCCeeeeeCCCCcccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHhCCCCEE
Confidence 357788863 5789999999999999999 9999985321 111 1223456555544445566666655444444
Q ss_pred ecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 025140 128 YLGDVGNGAAMKLVVNMIMGSMMATFSEGLLHSEKVGLD 166 (257)
Q Consensus 128 ~~G~~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gld 166 (257)
.+ |+ .. +-+.-..+...+|+++|+.
T Consensus 263 ~i---------k~----~~-GGit~~~~i~~~A~~~g~~ 287 (345)
T 2zad_A 263 NI---------KL----MK-SGISDALAIVEIAESSGLK 287 (345)
T ss_dssp EE---------CH----HH-HHHHHHHHHHHHHHTTTCE
T ss_pred EE---------ec----cc-ccHHHHHHHHHHHHHcCCe
Confidence 33 11 11 2233445556677777764
No 325
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=44.38 E-value=44 Score=28.92 Aligned_cols=72 Identities=7% Similarity=0.055 Sum_probs=49.8
Q ss_pred CCEEEEcCC-CC-HHHHHHHHHHHHHcCCcEEEecCCCC-hHHh----hcCceEEEecCChhHHHHHHHHHHHhcCCce
Q 025140 56 GKGYVDVST-VD-GDTSKLINGHIKATGASFLEAPVSGS-KKPA----EDGQLIFLAAGDKSLYNTVAPLLDIMGKSRF 127 (257)
Q Consensus 56 g~~ivd~ST-~~-p~~~~~la~~~~~~G~~~vdapV~g~-~~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~ 127 (257)
-.+.||... -+ ++++.++++.+++.|+.|++-|+... .... +.-..+++.++.-.....++++++.=..+++
T Consensus 194 ~~l~vDan~~~~d~~~A~~~~~~l~~~~i~~iEqP~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v 272 (374)
T 3sjn_A 194 MEVQIDLASKWHTCGHSAMMAKRLEEFNLNWIEEPVLADSLISYEKLSRQVSQKIAGGESLTTRYEFQEFITKSNADIV 272 (374)
T ss_dssp SEEEEECTTTTCSHHHHHHHHHHSGGGCCSEEECSSCTTCHHHHHHHHHHCSSEEEECTTCCHHHHHHHHHHHHCCSEE
T ss_pred CeEEEECCCCCCCHHHHHHHHHHhhhcCceEEECCCCcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEE
Confidence 368889864 56 89999999999999999999998632 1111 1224577777666666677788765444443
No 326
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=44.19 E-value=38 Score=29.81 Aligned_cols=71 Identities=17% Similarity=0.143 Sum_probs=48.8
Q ss_pred CEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEecCCCC-hHHh----hcCceEEEecCChhHHHHHHHHHHHhcCCce
Q 025140 57 KGYVDVS-TVDGDTSKLINGHIKATGASFLEAPVSGS-KKPA----EDGQLIFLAAGDKSLYNTVAPLLDIMGKSRF 127 (257)
Q Consensus 57 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~vdapV~g~-~~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~ 127 (257)
.+.||.. .-+++++.++++.+++.|+.|++-|+... .... +.-..+|+.++.-.....++++++.=+.+++
T Consensus 180 ~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~i~~~~~~~~~l~~~a~d~v 256 (405)
T 3rr1_A 180 EFGLDFHGRVSAPMAKVLIKELEPYRPLFIEEPVLAEQAETYARLAAHTHLPIAAGERMFSRFDFKRVLEAGGVSIL 256 (405)
T ss_dssp EEEEECCSCBCHHHHHHHHHHHGGGCCSCEECSSCCSSTHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHCCCSEE
T ss_pred eEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCCCcccHHHHHHHHhcCCCCEEecCCcCCHHHHHHHHHHhCCCeE
Confidence 5788886 46789999999999999999999998632 1111 2234567777665555667777765444433
No 327
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=44.13 E-value=26 Score=25.81 Aligned_cols=21 Identities=19% Similarity=0.355 Sum_probs=16.3
Q ss_pred HhcCCEEEEecCChHHHHHHh
Q 025140 23 AASCDVTFAMLADPESAMDVA 43 (257)
Q Consensus 23 ~~~advvi~~l~~~~~v~~v~ 43 (257)
+.++|+||+|++++.....+.
T Consensus 82 ~~~ad~Vi~~~~~~~~~~~~~ 102 (155)
T 2g1u_A 82 MEKADMVFAFTNDDSTNFFIS 102 (155)
T ss_dssp GGGCSEEEECSSCHHHHHHHH
T ss_pred cccCCEEEEEeCCcHHHHHHH
Confidence 567999999999977665554
No 328
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=44.05 E-value=7.9 Score=33.65 Aligned_cols=46 Identities=20% Similarity=0.198 Sum_probs=26.7
Q ss_pred CCHHHHHhcCCEEEEecCChHH-HHHHhcCCCcccccCCCCCEEEEcCC
Q 025140 17 PSPDEVAASCDVTFAMLADPES-AMDVACGKHGAASGMGPGKGYVDVST 64 (257)
Q Consensus 17 ~s~~ea~~~advvi~~l~~~~~-v~~v~~~~~~~~~~l~~g~~ivd~ST 64 (257)
+++.++++++|+||.|++.+.. ...++. +..++.+.+|.+|||.+.
T Consensus 221 ~~l~~~~~~~DvVi~~~g~~~~~~~~li~--~~~l~~mk~gg~iV~v~~ 267 (369)
T 2eez_A 221 ANIKKSVQHADLLIGAVLVPGAKAPKLVT--RDMLSLMKEGAVIVDVAV 267 (369)
T ss_dssp HHHHHHHHHCSEEEECCC-------CCSC--HHHHTTSCTTCEEEECC-
T ss_pred HHHHHHHhCCCEEEECCCCCccccchhHH--HHHHHhhcCCCEEEEEec
Confidence 3566777889999999886542 111111 233455678888999884
No 329
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=43.90 E-value=1.1e+02 Score=26.76 Aligned_cols=72 Identities=8% Similarity=-0.021 Sum_probs=47.5
Q ss_pred CCEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEecCCCChHHh---hcCceEEEecCChhHHHHHHHHHHHhcCCce
Q 025140 56 GKGYVDVS-TVDGDTSKLINGHIKATGASFLEAPVSGSKKPA---EDGQLIFLAAGDKSLYNTVAPLLDIMGKSRF 127 (257)
Q Consensus 56 g~~ivd~S-T~~p~~~~~la~~~~~~G~~~vdapV~g~~~~a---~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~ 127 (257)
-.+.||.. .-+++++.++++.+++.|+.|++-|...-...+ +.-..+|+.++.-.....++++++.=..+++
T Consensus 214 ~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE~P~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v 289 (409)
T 3go2_A 214 VEILLDLNFNAKPEGYLKILRELADFDLFWVEIDSYSPQGLAYVRNHSPHPISSCETLFGIREFKPFFDANAVDVA 289 (409)
T ss_dssp SEEEEECTTCSCHHHHHHHHHHTTTSCCSEEECCCSCHHHHHHHHHTCSSCEEECTTCCHHHHHHHHHHTTCCSEE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHhhcCCeEEEeCcCCHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEE
Confidence 35788986 467899999999999999999999974211111 2223466666655555666777665444443
No 330
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=43.84 E-value=30 Score=25.01 Aligned_cols=57 Identities=12% Similarity=0.106 Sum_probs=33.1
Q ss_pred HhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEec
Q 025140 23 AASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAP 88 (257)
Q Consensus 23 ~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vdap 88 (257)
+.++|+||++++++.....++. .+..+.++..+|- -...++.. +.+++.|+.++=.|
T Consensus 69 i~~ad~vi~~~~~~~~n~~~~~----~a~~~~~~~~iia-r~~~~~~~----~~l~~~G~d~vi~p 125 (140)
T 3fwz_A 69 LECAKWLILTIPNGYEAGEIVA----SARAKNPDIEIIA-RAHYDDEV----AYITERGANQVVMG 125 (140)
T ss_dssp GGGCSEEEECCSCHHHHHHHHH----HHHHHCSSSEEEE-EESSHHHH----HHHHHTTCSEEEEH
T ss_pred cccCCEEEEECCChHHHHHHHH----HHHHHCCCCeEEE-EECCHHHH----HHHHHCCCCEEECc
Confidence 4689999999999877655542 1222323333332 33445543 45566888776544
No 331
>3szu_A ISPH, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; 3Fe-4S iron-sulfur cluster, conserved cysteine, IPP and DMAP production final STEP; HET: H6P; 1.40A {Escherichia coli} PDB: 3szl_A* 3f7t_A* 3szo_A* 3t0f_A* 3t0g_A* 3urk_A* 3utc_A* 3utd_A* 3uv3_A* 3uv6_A* 3uv7_A* 3uwm_A* 3ke8_A* 3ke9_A* 3kef_A* 3kel_A 3kem_A*
Probab=43.78 E-value=11 Score=32.42 Aligned_cols=68 Identities=9% Similarity=0.030 Sum_probs=33.5
Q ss_pred hhhhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCC
Q 025140 6 NAFYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGA 82 (257)
Q Consensus 6 ~~~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~ 82 (257)
+.|.+.|+.+.+++.|+-.++-+||..=.-+.++.+.+ ..+|-.+||.|--.+...++.+++..+.|-
T Consensus 59 ~~L~~~Gv~~ve~l~ev~~g~~VIirAHGv~~~v~~~a---------~~rgl~iiDATCP~V~Kvh~~v~~~~~~Gy 126 (328)
T 3szu_A 59 DSLRERGAIFIEQISEVPDGAILIFSAHGVSQAVRNEA---------KSRDLTVFDATCPLVTKVHMEVARASRRGE 126 (328)
T ss_dssp HHHHHTTEEEESSGGGSCTTCEEEECTTCCCHHHHHHH---------HHTTCEEEECCCHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHCCCEEecchhhCCCCCEEEEECCCCCHHHHHHH---------HHCCCEEEECCCcchHHHHHHHHHHHhCCC
Confidence 45556666666665555444334443333344443332 123445666655555555555555555443
No 332
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=43.42 E-value=69 Score=27.80 Aligned_cols=71 Identities=14% Similarity=0.027 Sum_probs=47.1
Q ss_pred CCEEEEcC-CCCHHHHHHHHHHHHH--cCCcEEEecCCCCh-HHh----hcCceEEEecCChhHHHHHHHHHHHhcCCc
Q 025140 56 GKGYVDVS-TVDGDTSKLINGHIKA--TGASFLEAPVSGSK-KPA----EDGQLIFLAAGDKSLYNTVAPLLDIMGKSR 126 (257)
Q Consensus 56 g~~ivd~S-T~~p~~~~~la~~~~~--~G~~~vdapV~g~~-~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~ 126 (257)
-.+.||.. .-+++++.++++.+++ .++.|++-|+...- ... +.-..+|..+..-.....++++++.=+..+
T Consensus 187 ~~L~vDaN~~w~~~~A~~~~~~l~~~~~~l~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~ 265 (379)
T 3r0u_A 187 IKFRFDANQGWNLAQTKQFIEEINKYSLNVEIIEQPVKYYDIKAMAEITKFSNIPVVADESVFDAKDAERVIDEQACNM 265 (379)
T ss_dssp SEEEEECTTCCCHHHHHHHHHHHHTSCCCEEEEECCSCTTCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHTTCCSE
T ss_pred CeEEEeCCCCcCHHHHHHHHHHHhhcCCCcEEEECCCCcccHHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcCCCCE
Confidence 36889986 4678999999999999 78999999986421 111 122346666655555556677766433333
No 333
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=43.38 E-value=9 Score=33.83 Aligned_cols=52 Identities=4% Similarity=-0.084 Sum_probs=36.0
Q ss_pred cCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHH
Q 025140 16 QPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLIN 74 (257)
Q Consensus 16 ~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la 74 (257)
..++.|+++++|++|-+.. +..+. +++++.+.++.+|+++|.-+|+..-+.+
T Consensus 254 ~~~L~eav~~ADVlIG~Sa-p~l~t------~emVk~Ma~~pIIfalSNPt~E~~p~~a 305 (388)
T 1vl6_A 254 SGDLETALEGADFFIGVSR-GNILK------PEWIKKMSRKPVIFALANPVPEIDPELA 305 (388)
T ss_dssp CSCHHHHHTTCSEEEECSC-SSCSC------HHHHTTSCSSCEEEECCSSSCSSCHHHH
T ss_pred hhhHHHHHccCCEEEEeCC-CCccC------HHHHHhcCCCCEEEEcCCCCCCCCHHHH
Confidence 5789999999999988865 42221 2334456678899999987665544433
No 334
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=43.34 E-value=34 Score=30.22 Aligned_cols=72 Identities=7% Similarity=-0.047 Sum_probs=48.5
Q ss_pred chhhhhcCccccCCHHHHHhc--CCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHH--HHHHHHHHHHHc
Q 025140 5 NNAFYYSRCRYQPSPDEVAAS--CDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGD--TSKLINGHIKAT 80 (257)
Q Consensus 5 ~~~~~~~Ga~~~~s~~ea~~~--advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~--~~~~la~~~~~~ 80 (257)
.+++.+.||++.++ ++.++ ||++|+.|--+... +++ ..++.+|-.+-.... ..+++.+.+.++
T Consensus 69 D~~Y~~AGA~I~~~--~~~~~a~aDi~IlkVkeP~~~-------~e~----~~~~~~i~f~~~~~~q~~~~~l~~~l~~~ 135 (394)
T 2qrj_A 69 INEYRQAGAIIVPA--GSWKTAPRDRIIIGLKEMPET-------DTF----PLVHEHIQFAHCYKDQAGWQNVLMRFIKG 135 (394)
T ss_dssp HHHHHHTTCEEECT--TGGGGSCTTSEEECSSCCCTT-------CCS----CCCSEEEECCCCSSCCTTHHHHHHHHHHH
T ss_pred HHHHHhCCcEEech--hhhhcCCCCeEEEEECCCCcH-------Hhh----ccCCcEEEEechhhccccCHHHHHHHHHC
Confidence 46788899999888 56665 89867777654310 112 357778777755443 346777888889
Q ss_pred CCcEEEecC
Q 025140 81 GASFLEAPV 89 (257)
Q Consensus 81 G~~~vdapV 89 (257)
|+..++--.
T Consensus 136 ~it~ia~E~ 144 (394)
T 2qrj_A 136 HGTLYDLEF 144 (394)
T ss_dssp TCEEEEGGG
T ss_pred CCeEEEeec
Confidence 999887643
No 335
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=42.98 E-value=11 Score=32.73 Aligned_cols=40 Identities=15% Similarity=0.081 Sum_probs=25.3
Q ss_pred CHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCC
Q 025140 18 SPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTV 65 (257)
Q Consensus 18 s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~ 65 (257)
++.+ .+++|+||+|+|.....+-+ .. .+..|..|||.|+.
T Consensus 71 d~~~-~~~vDvVf~atp~~~s~~~a----~~---~~~aG~~VId~s~~ 110 (350)
T 2ep5_A 71 NYED-HKDVDVVLSALPNELAESIE----LE---LVKNGKIVVSNASP 110 (350)
T ss_dssp SGGG-GTTCSEEEECCCHHHHHHHH----HH---HHHTTCEEEECSST
T ss_pred CHHH-hcCCCEEEECCChHHHHHHH----HH---HHHCCCEEEECCcc
Confidence 3444 37899999999876543322 12 23457778998864
No 336
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=42.69 E-value=39 Score=29.81 Aligned_cols=71 Identities=6% Similarity=-0.090 Sum_probs=47.5
Q ss_pred CEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEecCCCCh-HH----hhcCceEEEecCChhHHHHHHHHHHHhcCCce
Q 025140 57 KGYVDVS-TVDGDTSKLINGHIKATGASFLEAPVSGSK-KP----AEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRF 127 (257)
Q Consensus 57 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~vdapV~g~~-~~----a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~ 127 (257)
.+.||.+ .-+++++.++++.+++.|+.|++-|+...- .. .+.-..+|+.++.-.....++++++.=...++
T Consensus 222 ~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~d~v 298 (418)
T 3r4e_A 222 HLLHDGHHRYTPQEAANLGKMLEPYQLFWLEDCTPAENQEAFRLVRQHTVTPLAVGEIFNTIWDAKDLIQNQLIDYI 298 (418)
T ss_dssp EEEEECTTCSCHHHHHHHHHHHGGGCCSEEESCSCCSSGGGGHHHHHHCCSCEEECTTCCSGGGTHHHHHTTCCSEE
T ss_pred eEEEeCCCCCCHHHHHHHHHHHHhhCCCEEECCCCccCHHHHHHHHhcCCCCEEEcCCcCCHHHHHHHHHcCCCCeE
Confidence 6788986 367899999999999999999999985321 11 12224567776654445566777764333333
No 337
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=42.64 E-value=58 Score=26.48 Aligned_cols=56 Identities=11% Similarity=0.063 Sum_probs=34.5
Q ss_pred cCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCC-HHHHHHHHHH
Q 025140 11 SRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVD-GDTSKLINGH 76 (257)
Q Consensus 11 ~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~-p~~~~~la~~ 76 (257)
.|....+++.++. ++|+||-+. .|+++.+.+ + +..|.-+|..||.. +++..++.+.
T Consensus 41 ~gv~v~~dl~~l~-~~DVvIDft-~p~a~~~~~---~-----l~~g~~vVigTTG~s~e~~~~l~~a 97 (243)
T 3qy9_A 41 TPYQQYQHIADVK-GADVAIDFS-NPNLLFPLL---D-----EDFHLPLVVATTGEKEKLLNKLDEL 97 (243)
T ss_dssp CCSCBCSCTTTCT-TCSEEEECS-CHHHHHHHH---T-----SCCCCCEEECCCSSHHHHHHHHHHH
T ss_pred CCCceeCCHHHHh-CCCEEEEeC-ChHHHHHHH---H-----HhcCCceEeCCCCCCHHHHHHHHHH
Confidence 4677788888887 899886433 466666665 2 45666666666654 3333334433
No 338
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=42.37 E-value=26 Score=29.41 Aligned_cols=46 Identities=9% Similarity=0.021 Sum_probs=26.0
Q ss_pred HHHHhcCCEEEEecCChH---------------HHHHHhcCCCcccccCCCCCEEEEcCCCCHHHH
Q 025140 20 DEVAASCDVTFAMLADPE---------------SAMDVACGKHGAASGMGPGKGYVDVSTVDGDTS 70 (257)
Q Consensus 20 ~ea~~~advvi~~l~~~~---------------~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~ 70 (257)
.+++++||+||++++.+. .++++. +.+.+. .++.++|. .|.+.+..
T Consensus 62 ~~a~~~aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~---~~i~~~-~p~~~vi~-~tNP~~~~ 122 (304)
T 2v6b_A 62 HSELADAQVVILTAGANQKPGESRLDLLEKNADIFRELV---PQITRA-APDAVLLV-TSNPVDLL 122 (304)
T ss_dssp GGGGTTCSEEEECC------------CHHHHHHHHHHHH---HHHHHH-CSSSEEEE-CSSSHHHH
T ss_pred HHHhCCCCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHH---HHHHHh-CCCeEEEE-ecCchHHH
Confidence 478999999999996543 234444 334443 35666666 45555543
No 339
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=42.16 E-value=45 Score=29.69 Aligned_cols=67 Identities=15% Similarity=0.068 Sum_probs=46.4
Q ss_pred CCEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEecCCCChH-----HhhcCceEEEecCChhHHHHHHHHHHHh
Q 025140 56 GKGYVDVS-TVDGDTSKLINGHIKATGASFLEAPVSGSKK-----PAEDGQLIFLAAGDKSLYNTVAPLLDIM 122 (257)
Q Consensus 56 g~~ivd~S-T~~p~~~~~la~~~~~~G~~~vdapV~g~~~-----~a~~g~l~i~~gg~~~~~~~~~~ll~~~ 122 (257)
-.+.||.+ .-+++++.++++.+++.|+.|++-|+...-. -.+.-..+|+.+..-.....++++++.=
T Consensus 241 ~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~ 313 (440)
T 3t6c_A 241 VELLHDAHERITPINAIHMAKALEPYQLFFLEDPVAPENTEWLKMLRQQSSTPIAMGELFVNVNEWKPLIDNK 313 (440)
T ss_dssp SEEEEECTTCSCHHHHHHHHHHTGGGCCSEEECSSCGGGGGGHHHHHHHCCSCEEECTTCCSHHHHHHHHHTT
T ss_pred CeEEEECCCCCCHHHHHHHHHHhhhcCCCEEECCCChhhHHHHHHHHhhcCCCEEeCcccCCHHHHHHHHHcC
Confidence 36889986 4678999999999999999999999852111 1112235677766555556677777543
No 340
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=42.09 E-value=68 Score=27.79 Aligned_cols=66 Identities=11% Similarity=0.060 Sum_probs=43.7
Q ss_pred CCEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEecCCCCh-HHh----hcCceEEEecCChhHHHHHHHHHHH
Q 025140 56 GKGYVDVS-TVDGDTSKLINGHIKATGASFLEAPVSGSK-KPA----EDGQLIFLAAGDKSLYNTVAPLLDI 121 (257)
Q Consensus 56 g~~ivd~S-T~~p~~~~~la~~~~~~G~~~vdapV~g~~-~~a----~~g~l~i~~gg~~~~~~~~~~ll~~ 121 (257)
-.+.||.. .-+++++.++++.+++.|+.|++-|+...- ... +.-..+++.++.-...+.++.+++.
T Consensus 209 ~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~ 280 (388)
T 2nql_A 209 AKIAADMHWNQTPERALELIAEMQPFDPWFAEAPVWTEDIAGLEKVSKNTDVPIAVGEEWRTHWDMRARIER 280 (388)
T ss_dssp SEEEEECCSCSCHHHHHHHHHHHGGGCCSCEECCSCTTCHHHHHHHHTSCCSCEEECTTCCSHHHHHHHHTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHhhcCCCEEECCCChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHc
Confidence 45778875 357899999999999999999999985321 111 1223466666554445566666654
No 341
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=42.08 E-value=30 Score=29.42 Aligned_cols=19 Identities=11% Similarity=0.146 Sum_probs=16.0
Q ss_pred CHHHHHhcCCEEEEecCCh
Q 025140 18 SPDEVAASCDVTFAMLADP 36 (257)
Q Consensus 18 s~~ea~~~advvi~~l~~~ 36 (257)
++.++++++|+||++.+.+
T Consensus 69 d~~~al~gaDvVi~~ag~~ 87 (326)
T 1smk_A 69 QLEAALTGMDLIIVPAGVP 87 (326)
T ss_dssp HHHHHHTTCSEEEECCCCC
T ss_pred CHHHHcCCCCEEEEcCCcC
Confidence 6678999999999998643
No 342
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=41.91 E-value=64 Score=27.85 Aligned_cols=73 Identities=10% Similarity=0.027 Sum_probs=49.1
Q ss_pred CCEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEecCCCCh-HHh----hcCceEEEecCChhHHHHHHHHHHHhcCCcee
Q 025140 56 GKGYVDVS-TVDGDTSKLINGHIKATGASFLEAPVSGSK-KPA----EDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFY 128 (257)
Q Consensus 56 g~~ivd~S-T~~p~~~~~la~~~~~~G~~~vdapV~g~~-~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~ 128 (257)
-.+.||.. .-+++++.++.+.+++.|+.|++-|+...- ... +.-..+|+.+..-.....++++++.=..+++.
T Consensus 198 ~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ 276 (372)
T 3tj4_A 198 VRIAIDGNGKWDLPTCQRFCAAAKDLDIYWFEEPLWYDDVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAVAYVQ 276 (372)
T ss_dssp CEEEEECTTCCCHHHHHHHHHHTTTSCEEEEESCSCTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEEC
T ss_pred CcEEeeCCCCCCHHHHHHHHHHHhhcCCCEEECCCCchhHHHHHHHHhhcCCCEEeCCCccCHHHHHHHHHcCCCCEEE
Confidence 35788986 367899999999999999999999996431 111 12234677766655566677777654444433
No 343
>1obo_A Flavodoxin; electron transfer, flavoprotein, electron transport; HET: FMN; 1.2A {Anabaena SP} SCOP: c.23.5.1 PDB: 2v5v_A* 1dx9_A 1rcf_A* 1flv_A* 1obv_A* 2v5u_A* 1ftg_A 1qhe_A 2kqu_A 3esy_A* 3esz_A* 3esx_A*
Probab=41.89 E-value=1e+02 Score=22.69 Aligned_cols=63 Identities=10% Similarity=-0.104 Sum_probs=39.3
Q ss_pred HHhcCCEEEEecCCh------HHHHHHhcCCCcccccCCCCCEEEEcCCC--------CHHHHHHHHHHHHHcCCcEEEe
Q 025140 22 VAASCDVTFAMLADP------ESAMDVACGKHGAASGMGPGKGYVDVSTV--------DGDTSKLINGHIKATGASFLEA 87 (257)
Q Consensus 22 a~~~advvi~~l~~~------~~v~~v~~~~~~~~~~l~~g~~ivd~ST~--------~p~~~~~la~~~~~~G~~~vda 87 (257)
-+.+.|.||+..|.. ..++..+ +.+.....+|+.+.-.+|. .-...+++.+.+...|...+..
T Consensus 43 ~l~~~d~ii~g~p~y~~g~~p~~~~~fl---~~l~~~~l~~k~~~~f~tg~~~~~~~~~~~a~~~l~~~l~~~g~~~~~~ 119 (169)
T 1obo_A 43 DLNDYQYLIIGCPTLNIGELQSDWEGLY---SELDDVDFNGKLVAYFGTGDQIGYADNFQDAIGILEEKISQRGGKTVGY 119 (169)
T ss_dssp GGGGCSEEEEEEEEETTTEECHHHHHHH---TTGGGCCCTTCEEEEEEECCTTTTTTSTTHHHHHHHHHHHHTTCEECCC
T ss_pred HHhhCCEEEEEEeeCCCCcCCHHHHHHH---HHhhhcCcCCCEEEEEEECCCcchhHHHHHHHHHHHHHHHHCCCEEEEe
Confidence 456799999988874 3355565 3232222355555444431 2366778889999899887653
No 344
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=41.72 E-value=1.6e+02 Score=25.03 Aligned_cols=70 Identities=11% Similarity=0.041 Sum_probs=48.3
Q ss_pred CCEEEEcCC-CCHHHHHHHHHHH-HHcCCcEEEecCCCChHHh----hcCceEEEecCChhHHHHHHHHHHHhcCCce
Q 025140 56 GKGYVDVST-VDGDTSKLINGHI-KATGASFLEAPVSGSKKPA----EDGQLIFLAAGDKSLYNTVAPLLDIMGKSRF 127 (257)
Q Consensus 56 g~~ivd~ST-~~p~~~~~la~~~-~~~G~~~vdapV~g~~~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~ 127 (257)
-.+.||... -+++++.++++.+ ++.|+ |++-|+. ..... +.-..+++.++.-...+.++++++.=..+++
T Consensus 191 ~~l~vDan~~~~~~~a~~~~~~l~~~~~i-~iE~P~~-~~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v 266 (371)
T 2ps2_A 191 EFFIVDANGKLSVETALRLLRLLPHGLDF-ALEAPCA-TWRECISLRRKTDIPIIYDELATNEMSIVKILADDAAEGI 266 (371)
T ss_dssp CEEEEECTTBCCHHHHHHHHHHSCTTCCC-EEECCBS-SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHHTCCSEE
T ss_pred CEEEEECCCCcCHHHHHHHHHHHHhhcCC-cCcCCcC-CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEE
Confidence 467889863 5789999999999 99999 9999987 33322 1223566666655556677777766544443
No 345
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=41.54 E-value=33 Score=29.19 Aligned_cols=63 Identities=14% Similarity=-0.013 Sum_probs=40.1
Q ss_pred HHHHHhcCCEEEEecCChHHHHHHhcCCCcc--cccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEE
Q 025140 19 PDEVAASCDVTFAMLADPESAMDVACGKHGA--ASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE 86 (257)
Q Consensus 19 ~~ea~~~advvi~~l~~~~~v~~v~~~~~~~--~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vd 86 (257)
+.+.+.++|+||.+.|-.-.-. . +...+ .+.+.++.+++|+.-.+.+| .+.++++++|++.+|
T Consensus 220 l~~~l~~aDiIINaTp~Gm~~~-~--~~~p~~~~~~l~~~~~V~DlvY~P~~T--~ll~~A~~~G~~~~~ 284 (315)
T 3tnl_A 220 LRKEIAESVIFTNATGVGMKPF-E--GETLLPSADMLRPELIVSDVVYKPTKT--RLLEIAEEQGCQTLN 284 (315)
T ss_dssp HHHHHHTCSEEEECSSTTSTTS-T--TCCSCCCGGGCCTTCEEEESCCSSSSC--HHHHHHHHTTCEEEC
T ss_pred HHhhhcCCCEEEECccCCCCCC-C--CCCCCCcHHHcCCCCEEEEeccCCCCC--HHHHHHHHCCCeEeC
Confidence 4567789999999987431100 0 00011 23356788999999887666 456677888887554
No 346
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=40.77 E-value=44 Score=29.17 Aligned_cols=69 Identities=14% Similarity=0.019 Sum_probs=48.3
Q ss_pred CEEEEcCC-C-CHHHHHHHHHHHHHcCCcEEEecCCCC-hHHh----hcCceEEEecCChhHHHHHHHHHHHhcCC
Q 025140 57 KGYVDVST-V-DGDTSKLINGHIKATGASFLEAPVSGS-KKPA----EDGQLIFLAAGDKSLYNTVAPLLDIMGKS 125 (257)
Q Consensus 57 ~~ivd~ST-~-~p~~~~~la~~~~~~G~~~vdapV~g~-~~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~~~ 125 (257)
.+.||.+. - +++++.++++.+++.|+.|++-|+... .... +.-..+|+.++.-.....++++++.=.-.
T Consensus 202 ~l~vDan~~~~~~~~A~~~~~~L~~~~i~~iEeP~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d 277 (394)
T 3mqt_A 202 DMMVDCLYRWTDWQKARWTFRQLEDIDLYFIEACLQHDDLIGHQKLAAAINTRLCGAEMSTTRFEAQEWLEKTGIS 277 (394)
T ss_dssp EEEEECTTCCSCHHHHHHHHHHTGGGCCSEEESCSCTTCHHHHHHHHHHSSSEEEECTTCCHHHHHHHHHHHHCCS
T ss_pred eEEEECCCCCCCHHHHHHHHHHHhhcCCeEEECCCCcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCC
Confidence 57889875 3 689999999999999999999999632 1111 22345777777666666777777644333
No 347
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=40.57 E-value=46 Score=28.74 Aligned_cols=73 Identities=14% Similarity=0.039 Sum_probs=49.1
Q ss_pred CCEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEecCCCChH----H-hhcCceEEEecCChhHHHHHHHHHHHhcCCcee
Q 025140 56 GKGYVDVS-TVDGDTSKLINGHIKATGASFLEAPVSGSKK----P-AEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFY 128 (257)
Q Consensus 56 g~~ivd~S-T~~p~~~~~la~~~~~~G~~~vdapV~g~~~----~-a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~ 128 (257)
-.+.||.. .-+++++.++++.+++.|+.|++-|+...-. . .+.-..++..+..-.....++++++.=..+++.
T Consensus 185 ~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iEqP~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~ 263 (368)
T 3q45_A 185 ITLRIDANQGWSVETAIETLTLLEPYNIQHCEEPVSRNLYTALPKIRQACRIPIMADESCCNSFDAERLIQIQACDSFN 263 (368)
T ss_dssp SEEEEECTTCBCHHHHHHHHHHHGGGCCSCEECCBCGGGGGGHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCCSEEE
T ss_pred CeEEEECCCCCChHHHHHHHHHHhhcCCCEEECCCChhHHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCeEE
Confidence 35788975 3578899999999999999999999853211 1 122245677766555566677777654444443
No 348
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=40.55 E-value=18 Score=31.01 Aligned_cols=30 Identities=7% Similarity=0.060 Sum_probs=23.3
Q ss_pred CccccCCHHHHHhcCCEEEEecCChHHHHH
Q 025140 12 RCRYQPSPDEVAASCDVTFAMLADPESAMD 41 (257)
Q Consensus 12 Ga~~~~s~~ea~~~advvi~~l~~~~~v~~ 41 (257)
+..+..++.++..++|+|+.|.|+....+.
T Consensus 66 ~~~v~~d~~~l~~~vDvV~~aTp~~~h~~~ 95 (334)
T 2czc_A 66 GFEVAGTLNDLLEKVDIIVDATPGGIGAKN 95 (334)
T ss_dssp TCCCSCBHHHHHTTCSEEEECCSTTHHHHH
T ss_pred ceEEcCcHHHhccCCCEEEECCCccccHHH
Confidence 345567899998899999999998765443
No 349
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=39.86 E-value=12 Score=31.17 Aligned_cols=62 Identities=10% Similarity=-0.072 Sum_probs=38.5
Q ss_pred HHHHhcCCEEEEecCChHHH--HHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEE
Q 025140 20 DEVAASCDVTFAMLADPESA--MDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE 86 (257)
Q Consensus 20 ~ea~~~advvi~~l~~~~~v--~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vd 86 (257)
.+...++|+||.|.+....- +..... -.+.+.++.+++|+++. |..+ .+.+..+++|+.+++
T Consensus 188 ~~~~~~~DilVn~ag~~~~~~~~~~~~~---~~~~l~~~~~v~Dv~y~-p~~t-~ll~~a~~~G~~~~~ 251 (287)
T 1nvt_A 188 DVDLDGVDIIINATPIGMYPNIDVEPIV---KAEKLREDMVVMDLIYN-PLET-VLLKEAKKVNAKTIN 251 (287)
T ss_dssp TCCCTTCCEEEECSCTTCTTCCSSCCSS---CSTTCCSSSEEEECCCS-SSSC-HHHHHHHTTTCEEEC
T ss_pred HHhhCCCCEEEECCCCCCCCCCCCCCCC---CHHHcCCCCEEEEeeeC-CccC-HHHHHHHHCCCEEeC
Confidence 45567899999998864321 001000 12345688999999985 4333 356677778887653
No 350
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=39.85 E-value=43 Score=29.14 Aligned_cols=72 Identities=14% Similarity=0.120 Sum_probs=48.6
Q ss_pred CCCEEEEcCC-CCHHHHHHHHHHHHHcCCcEEEecCCCCh-HHh----hcCceEEEecCChhHHHHHHHHHHHhcCCc
Q 025140 55 PGKGYVDVST-VDGDTSKLINGHIKATGASFLEAPVSGSK-KPA----EDGQLIFLAAGDKSLYNTVAPLLDIMGKSR 126 (257)
Q Consensus 55 ~g~~ivd~ST-~~p~~~~~la~~~~~~G~~~vdapV~g~~-~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~ 126 (257)
.-.+.||... -+++++.++++.+++.|+.|++-|+...- ... +.-..+|+.++.-...+.++++++.=..++
T Consensus 194 d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~ 271 (391)
T 2qgy_A 194 ELPLMLDLAVPEDLDQTKSFLKEVSSFNPYWIEEPVDGENISLLTEIKNTFNMKVVTGEKQSGLVHFRELISRNAADI 271 (391)
T ss_dssp SSCEEEECCCCSCHHHHHHHHHHHGGGCCSEEECSSCTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSE
T ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhcCCCeEeCCCChhhHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCE
Confidence 3468889864 57899999999999999999999986321 111 122456777665555667777776544333
No 351
>4b1v_M Phosphatase and actin regulator 1; structural protein, nucleotide-binding, transcription regula transcription, muscle protein, ATP-binding; HET: ATP LAB; 1.75A {Mus musculus}
Probab=39.44 E-value=10 Score=20.25 Aligned_cols=13 Identities=8% Similarity=0.171 Sum_probs=11.6
Q ss_pred CCCcchhhhhcCc
Q 025140 1 MKTPNNAFYYSRC 13 (257)
Q Consensus 1 ~~~~~~~~~~~Ga 13 (257)
||+++++|+..|.
T Consensus 14 ~rqsreelikrgv 26 (32)
T 4b1v_M 14 MRQSREELIKRGV 26 (32)
T ss_dssp TCCCHHHHHHTTS
T ss_pred hcccHHHHHHhhh
Confidence 7999999999885
No 352
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=39.29 E-value=94 Score=27.04 Aligned_cols=71 Identities=8% Similarity=0.072 Sum_probs=48.5
Q ss_pred CCEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEecCCCCh--HHh----hcCceEEEecCChhHHHHHHHHHHHhcCCc
Q 025140 56 GKGYVDVS-TVDGDTSKLINGHIKATGASFLEAPVSGSK--KPA----EDGQLIFLAAGDKSLYNTVAPLLDIMGKSR 126 (257)
Q Consensus 56 g~~ivd~S-T~~p~~~~~la~~~~~~G~~~vdapV~g~~--~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~ 126 (257)
-.+.||.. .-+++++.++++.+++.|+.|++-|+...- ... +.-..+++.+..-.....++++++.=+-.+
T Consensus 200 ~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP~~~~d~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~ 277 (392)
T 3ddm_A 200 TPLMADANQGWDLPRARQMAQRLGPAQLDWLEEPLRADRPAAEWAELAQAAPMPLAGGENIAGVAAFETALAARSLRV 277 (392)
T ss_dssp SCEEEECTTCCCHHHHHHHHHHHGGGCCSEEECCSCTTSCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCEEE
T ss_pred ceEEEeCCCCCCHHHHHHHHHHHHHhCCCEEECCCCccchHHHHHHHHHhcCCCEEeCCCCCCHHHHHHHHHcCCCCE
Confidence 36889985 467899999999999999999999996432 111 122346777665555566777766443333
No 353
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=39.21 E-value=40 Score=29.83 Aligned_cols=67 Identities=7% Similarity=-0.083 Sum_probs=45.5
Q ss_pred CCEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEecCCCChH-H----hhcCceEEEecCChhHHHHHHHHHHHh
Q 025140 56 GKGYVDVS-TVDGDTSKLINGHIKATGASFLEAPVSGSKK-P----AEDGQLIFLAAGDKSLYNTVAPLLDIM 122 (257)
Q Consensus 56 g~~ivd~S-T~~p~~~~~la~~~~~~G~~~vdapV~g~~~-~----a~~g~l~i~~gg~~~~~~~~~~ll~~~ 122 (257)
-.+.||.+ .-+++++.++++.+++.|+.|++-|+...-. . .+.-..+|..+..-.....++++++.=
T Consensus 223 ~~L~vDaN~~~~~~~A~~~~~~Le~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~ll~~g 295 (422)
T 3tji_A 223 LHILHDVHERLFPQQAVQLAKQLEPFQPYFIEDILPPQQSAWLEQVRQQSCVPLALGELFNNPAEWHDLIVNR 295 (422)
T ss_dssp SEEEEECTTCSCHHHHHHHHHHHGGGCCSEEECCSCGGGGGGHHHHHHHCCCCEEECTTCCSGGGTHHHHHTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhhCCCeEECCCChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhcC
Confidence 36888986 4678999999999999999999999852111 1 112234677666544445667776543
No 354
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=38.68 E-value=84 Score=27.28 Aligned_cols=101 Identities=8% Similarity=0.033 Sum_probs=55.4
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEEe--cCCCChHHh-------h---cCceEEEecCChhHHHHHHHHHHHhcCCceec-C
Q 025140 64 TVDGDTSKLINGHIKATGASFLEA--PVSGSKKPA-------E---DGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYL-G 130 (257)
Q Consensus 64 T~~p~~~~~la~~~~~~G~~~vda--pV~g~~~~a-------~---~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~~-G 130 (257)
..+++...++++.+.+.|++++++ |++. |... . .-++..++=+....++++...+...+...+++ .
T Consensus 30 ~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~-~~d~e~v~~i~~~~~~~~i~~l~r~~~~di~~a~~al~~ag~~~v~if~ 108 (370)
T 3rmj_A 30 AMTKEEKIRVARQLEKLGVDIIEAGFAAAS-PGDFEAVNAIAKTITKSTVCSLSRAIERDIRQAGEAVAPAPKKRIHTFI 108 (370)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEEEGGGC-HHHHHHHHHHHTTCSSSEEEEEEESSHHHHHHHHHHHTTSSSEEEEEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEeCCCCC-HHHHHHHHHHHHhCCCCeEEEEecCCHHHHHHHHHHHhhCCCCEEEEEe
Confidence 578999999999999999999998 4433 2111 1 11233333355555555544444445444443 2
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 025140 131 DVGNGAAMKLVVNMIMGSMMATFSEGLLHSEKVGLD 166 (257)
Q Consensus 131 ~~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gld 166 (257)
+.-.-+. +.-.|.-..-.+..+.++..+++++|.+
T Consensus 109 ~~Sd~h~-~~~l~~s~~e~l~~~~~~v~~a~~~g~~ 143 (370)
T 3rmj_A 109 ATSPIHM-EYKLKMKPKQVIEAAVKAVKIAREYTDD 143 (370)
T ss_dssp ECSHHHH-HHTTCCCHHHHHHHHHHHHHHHTTTCSC
T ss_pred cCcHHHH-HHHhCCCHHHHHHHHHHHHHHHHHcCCE
Confidence 2222222 1111222233455666777778777753
No 355
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=38.64 E-value=55 Score=28.54 Aligned_cols=72 Identities=14% Similarity=0.092 Sum_probs=47.7
Q ss_pred CCEEEEcCC-CCHHHHHHHHHHHHHcCCcEEEecCCCCh-HHh----hcCceEEEecCChhHHHHHHHHHHHhcCCce
Q 025140 56 GKGYVDVST-VDGDTSKLINGHIKATGASFLEAPVSGSK-KPA----EDGQLIFLAAGDKSLYNTVAPLLDIMGKSRF 127 (257)
Q Consensus 56 g~~ivd~ST-~~p~~~~~la~~~~~~G~~~vdapV~g~~-~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~ 127 (257)
-.+.||... -+++++.++++.+++.|+.|++-|+...- ... +.-..+|+.++.-...+.++++++.=..+++
T Consensus 216 ~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v 293 (407)
T 2o56_A 216 VDIIAEMHAFTDTTSAIQFGRMIEELGIFYYEEPVMPLNPAQMKQVADKVNIPLAAGERIYWRWGYRPFLENGSLSVI 293 (407)
T ss_dssp SEEEEECTTCSCHHHHHHHHHHHGGGCCSCEECSSCSSSHHHHHHHHHHCCSCEEECTTCCHHHHHHHHHHTTCCSEE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhcCCCEEeCCCChhhHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCCCEE
Confidence 458889864 57899999999999999999999985321 111 1223466666554455667777765443433
No 356
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=38.62 E-value=36 Score=30.49 Aligned_cols=63 Identities=10% Similarity=0.138 Sum_probs=39.7
Q ss_pred CccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcE
Q 025140 12 RCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASF 84 (257)
Q Consensus 12 Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ 84 (257)
+.+.++++.|+++++|+|++++..++- ++. .-+.+.+.+ +..+|+|.-.+.... .+++.|..|
T Consensus 375 ~~~~~~~~~~~~~~ad~vvi~t~~~~f-~~~--d~~~~~~~~-~~~~i~D~r~~~~~~------~~~~~g~~y 437 (446)
T 4a7p_A 375 DVEFVENPYAAADGADALVIVTEWDAF-RAL--DLTRIKNSL-KSPVLVDLRNIYPPA------ELERAGLQY 437 (446)
T ss_dssp SCCBCSCHHHHHTTBSEEEECSCCTTT-TSC--CHHHHHTTB-SSCBEECSSCCSCHH------HHHHTTCBC
T ss_pred CceEecChhHHhcCCCEEEEeeCCHHh-hcC--CHHHHHHhc-CCCEEEECCCCCCHH------HHHhcCCEE
Confidence 567788999999999999999877541 100 001122222 457899987765422 345667666
No 357
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=38.36 E-value=16 Score=30.61 Aligned_cols=70 Identities=4% Similarity=-0.093 Sum_probs=43.7
Q ss_pred hhhcCccccCCHHHHHhcCCEEEEecCCh------------HH--H-HHHhcCCCcccccCCCCCEEEEcCCCCHHHHHH
Q 025140 8 FYYSRCRYQPSPDEVAASCDVTFAMLADP------------ES--A-MDVACGKHGAASGMGPGKGYVDVSTVDGDTSKL 72 (257)
Q Consensus 8 ~~~~Ga~~~~s~~ea~~~advvi~~l~~~------------~~--v-~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~ 72 (257)
+.+.|+...++..+.++++|+|++..|.. .. + ++++ +.++++++|+ ..... ..
T Consensus 43 ~~~~g~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~s~~a~~~~~~~~~~l-------~~~~~l~~i~-~g~~~----~d 110 (300)
T 2rir_A 43 HGFTGAVKCNIDEIPFQQIDSIILPVSATTGEGVVSTVFSNEEVVLKQDHL-------DRTPAHCVIF-SGISN----AY 110 (300)
T ss_dssp CCCTTEEECCGGGSCGGGCSEEECCSSCEETTTEECBSSCSSCEECCHHHH-------HTSCTTCEEE-ESSCC----HH
T ss_pred cccccceeccchHHHHhcCCEEEeccccccCCcccccccccCCccchHHHH-------hhcCCCCEEE-EecCC----HH
Confidence 34456667777888899999998743321 01 1 2222 3456777777 33322 34
Q ss_pred HHHHHHHcCCcEEEecC
Q 025140 73 INGHIKATGASFLEAPV 89 (257)
Q Consensus 73 la~~~~~~G~~~vdapV 89 (257)
+.+.+.++|+.+...|-
T Consensus 111 ~~~~~~~~gi~v~~~~~ 127 (300)
T 2rir_A 111 LENIAAQAKRKLVKLFE 127 (300)
T ss_dssp HHHHHHHTTCCEEEGGG
T ss_pred HHHHHHHCCCEEEeecC
Confidence 34677889999988874
No 358
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=38.31 E-value=11 Score=33.84 Aligned_cols=52 Identities=12% Similarity=0.108 Sum_probs=35.4
Q ss_pred hcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHH
Q 025140 10 YSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGD 68 (257)
Q Consensus 10 ~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~ 68 (257)
..|.+ ..++.|+++.+|+||+|-.+.. ++ . ...++.+++|.++||.+-..++
T Consensus 261 ~~G~~-v~~Leeal~~ADIVi~atgt~~----lI-~-~e~l~~MK~gailINvgrg~~E 312 (435)
T 3gvp_A 261 MDGFR-LVKLNEVIRQVDIVITCTGNKN----VV-T-REHLDRMKNSCIVCNMGHSNTE 312 (435)
T ss_dssp HTTCE-ECCHHHHTTTCSEEEECSSCSC----SB-C-HHHHHHSCTTEEEEECSSTTTT
T ss_pred HcCCE-eccHHHHHhcCCEEEECCCCcc----cC-C-HHHHHhcCCCcEEEEecCCCcc
Confidence 34644 3579999999999999743322 22 0 1234567899999999977654
No 359
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=37.98 E-value=19 Score=30.96 Aligned_cols=95 Identities=15% Similarity=0.008 Sum_probs=47.6
Q ss_pred HhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCH-HHHHHHHHHHHHcCC-cEEEecCCCChHH----h
Q 025140 23 AASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDG-DTSKLINGHIKATGA-SFLEAPVSGSKKP----A 96 (257)
Q Consensus 23 ~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p-~~~~~la~~~~~~G~-~~vdapV~g~~~~----a 96 (257)
..++|+||.|+|.....+-+ . ..+..|..+||.|.-.- +......+|..+|-. .+++.-+.|-|+- .
T Consensus 66 ~~~vDvV~~a~g~~~s~~~a----~---~~~~aG~~VId~Sa~~r~~~~~~y~~~y~~h~~~e~l~~~vygvpE~n~~~i 138 (345)
T 2ozp_A 66 LEPADILVLALPHGVFAREF----D---RYSALAPVLVDLSADFRLKDPELYRRYYGEHPRPDLLGRFVYAVPELYREAL 138 (345)
T ss_dssp CCCCSEEEECCCTTHHHHTH----H---HHHTTCSEEEECSSTTSCSCHHHHHHHHCCCSSGGGTTSSEECCHHHHHHHH
T ss_pred hcCCCEEEEcCCcHHHHHHH----H---HHHHCCCEEEEcCccccCCChHHHHhhhccccchhhhccCcEeccccCHHHh
Confidence 47899999999987654322 1 22356888999997431 111123344432211 1112223344332 2
Q ss_pred hcCceEEEecCCh-hHHHHHHHHHHHhcC
Q 025140 97 EDGQLIFLAAGDK-SLYNTVAPLLDIMGK 124 (257)
Q Consensus 97 ~~g~l~i~~gg~~-~~~~~~~~ll~~~~~ 124 (257)
....+.--.||.. ...-.+.|+.+..+-
T Consensus 139 ~~~~iIanp~C~tt~~~~~l~pL~~~~~i 167 (345)
T 2ozp_A 139 KGADWIAGAGCNATATLLGLYPLLKAGVL 167 (345)
T ss_dssp HTCSEEECCCHHHHHHHHHHHHHHHTTCB
T ss_pred hcCCEEeCCCcHHHHHHHHHHHHHHhcCC
Confidence 3334333334433 333456777776553
No 360
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=37.70 E-value=56 Score=28.76 Aligned_cols=66 Identities=8% Similarity=0.074 Sum_probs=46.9
Q ss_pred CEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEecCCCCh-HHh----hcCceEEEecCChhHHHHHHHHHHHh
Q 025140 57 KGYVDVS-TVDGDTSKLINGHIKATGASFLEAPVSGSK-KPA----EDGQLIFLAAGDKSLYNTVAPLLDIM 122 (257)
Q Consensus 57 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~vdapV~g~~-~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~ 122 (257)
.+.||.+ .-+++++.++++++++.|+.|++-|+...- ... +.-..+|+.+..-.....++++++.=
T Consensus 203 ~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~ 274 (412)
T 4e4u_A 203 DLLFGTHGQMVPSSAIRLAKRLEKYDPLWFEEPVPPGQEEAIAQVAKHTSIPIATGERLTTKYEFHKLLQAG 274 (412)
T ss_dssp EEEECCCSCBCHHHHHHHHHHHGGGCCSEEECCSCSSCHHHHHHHHHTCSSCEEECTTCCHHHHHHHHHHTT
T ss_pred eEEEECCCCCCHHHHHHHHHHhhhcCCcEEECCCChhhHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcC
Confidence 5788886 467899999999999999999999986431 111 22245677776655566777777643
No 361
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=37.54 E-value=1.2e+02 Score=26.14 Aligned_cols=71 Identities=13% Similarity=0.038 Sum_probs=46.1
Q ss_pred CEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEecCCCC-hHHh----hcCceEEEecCChhHHHHHHHHHHHhcCCce
Q 025140 57 KGYVDVS-TVDGDTSKLINGHIKATGASFLEAPVSGS-KKPA----EDGQLIFLAAGDKSLYNTVAPLLDIMGKSRF 127 (257)
Q Consensus 57 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~vdapV~g~-~~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~ 127 (257)
.+.||.. .-+++++.++.+.+++.|+.|++-|+... .... +.-..+++.+..-.....++++++.=..+++
T Consensus 193 ~l~vDan~~~~~~~A~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v 269 (377)
T 3my9_A 193 DLRLDFNQALTPFGAMKILRDVDAFRPTFIEQPVPRRHLDAMAGFAAALDTPILADESCFDAVDLMEVVRRQAADAI 269 (377)
T ss_dssp EEEEECTTCCCTTTHHHHHHHHHTTCCSCEECCSCTTCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEE
T ss_pred eEEEeCCCCcCHHHHHHHHHHHhhcCCCEEECCCCccCHHHHHHHHHhCCCCEEECCccCCHHHHHHHHHcCCCCEE
Confidence 5788875 35678889999999999999999998642 1111 1123466666655555566666654444433
No 362
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=37.51 E-value=1.5e+02 Score=25.23 Aligned_cols=42 Identities=14% Similarity=0.147 Sum_probs=31.3
Q ss_pred cccccCCCCC-EEEEcCC-------CCHHHHHHHHHHHHHcCCcEEEecC
Q 025140 48 GAASGMGPGK-GYVDVST-------VDGDTSKLINGHIKATGASFLEAPV 89 (257)
Q Consensus 48 ~~~~~l~~g~-~ivd~ST-------~~p~~~~~la~~~~~~G~~~vdapV 89 (257)
.+.+...++. +.|-+|. .++++..++++.+++.|+.||+...
T Consensus 211 aVR~avG~d~pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~ 260 (349)
T 3hgj_A 211 AVREVVPRELPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSS 260 (349)
T ss_dssp HHHHHSCTTSCEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHhcCCceEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 3444444444 6777774 4688899999999999999999875
No 363
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=37.27 E-value=69 Score=27.57 Aligned_cols=73 Identities=12% Similarity=-0.027 Sum_probs=48.4
Q ss_pred CCEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEecCCCCh-HHh----hcCceEEEecCChhHHHHHHHHHHHhcCCcee
Q 025140 56 GKGYVDVS-TVDGDTSKLINGHIKATGASFLEAPVSGSK-KPA----EDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFY 128 (257)
Q Consensus 56 g~~ivd~S-T~~p~~~~~la~~~~~~G~~~vdapV~g~~-~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~ 128 (257)
-.+.||.. .-+++++.++.+.+++.|+.|++-|+...- ... +.-..+|+.++.-.....++++++.=.-+++.
T Consensus 186 ~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ 264 (367)
T 3dg3_A 186 IELYVDGNRGWSAAESLRAMREMADLDLLFAEELCPADDVLSRRRLVGQLDMPFIADESVPTPADVTREVLGGSATAIS 264 (367)
T ss_dssp SEEEEECTTCSCHHHHHHHHHHTTTSCCSCEESCSCTTSHHHHHHHHHHCSSCEEECTTCSSHHHHHHHHHHTSCSEEE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHhCCCEEECCCCcccHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEE
Confidence 35788876 457899999999999999999999986431 111 12234666666555556667776654444443
No 364
>3p04_A Uncharacterized BCR; SEPF homolog, DUF552, PSI-biology, NESG, structural genomics structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=36.73 E-value=71 Score=21.67 Aligned_cols=47 Identities=13% Similarity=0.052 Sum_probs=33.8
Q ss_pred CCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHH
Q 025140 26 CDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIK 78 (257)
Q Consensus 26 advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~ 78 (257)
+.++++--...++++++. +.+. ....++||++...++.++++-..+.
T Consensus 5 ~~Ivv~~P~sy~Da~~I~---d~Lr---~~~~VvvNL~~ld~~~AqRivDF~s 51 (87)
T 3p04_A 5 STIVPVELHSFEDAQVIG---GAFR---DGDAVVFDMSLLSREEARRIVDFAA 51 (87)
T ss_dssp CSCEEEECSSGGGHHHHH---HHHH---TTCCEEEECTTSCHHHHHHHHHHHH
T ss_pred cEEEEEecCcHHHHHHHH---HHHH---CCCEEEEECCCCCHHHHHHHHHHhc
Confidence 566666656667777665 3222 2346899999999999999988875
No 365
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=36.50 E-value=73 Score=22.35 Aligned_cols=62 Identities=19% Similarity=0.071 Sum_probs=39.9
Q ss_pred HHHhcCCEEEEecCCh-----HH--HHHHhcCCCcccccCCCCCEEE---EcCCCCHHHHHHHHHHHHHcCCcEEE
Q 025140 21 EVAASCDVTFAMLADP-----ES--AMDVACGKHGAASGMGPGKGYV---DVSTVDGDTSKLINGHIKATGASFLE 86 (257)
Q Consensus 21 ea~~~advvi~~l~~~-----~~--v~~v~~~~~~~~~~l~~g~~iv---d~ST~~p~~~~~la~~~~~~G~~~vd 86 (257)
+-+.++|.||+..|.. .. ++..+ +.+... .+|+.+. ..........+.+.+.+...|..+++
T Consensus 42 ~~l~~~d~vi~g~p~y~~~~~~~~~~~~fl---~~l~~~-l~~k~~~~~~t~g~~~~~~~~~l~~~l~~~g~~~~~ 113 (137)
T 2fz5_A 42 DDVASKDVILLGCPAMGSEELEDSVVEPFF---TDLAPK-LKGKKVGLFGSYGWGSGEWMDAWKQRTEDTGATVIG 113 (137)
T ss_dssp HHHHTCSEEEEECCCBTTTBCCHHHHHHHH---HHHGGG-CSSCEEEEEEEESSCCSHHHHHHHHHHHHTTCEEEE
T ss_pred HHHhcCCEEEEEccccCCCCCCHHHHHHHH---HHhhhh-cCCCEEEEEEecCCCCchHHHHHHHHHHHCCCEEcC
Confidence 4467899999999984 34 77766 332222 2444332 22222347788899999999998874
No 366
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=36.44 E-value=21 Score=32.30 Aligned_cols=62 Identities=11% Similarity=0.069 Sum_probs=38.8
Q ss_pred ccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCC-CCCEEEEcCCCCHHHHHHHHHHHHHcCCcEE
Q 025140 15 YQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMG-PGKGYVDVSTVDGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 15 ~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~-~g~~ivd~ST~~p~~~~~la~~~~~~G~~~v 85 (257)
.+.++.|+++++|+||+++..++- ++. ..+.+.+.+. +.++|+|.-.+-.. +.+++.|..|.
T Consensus 404 ~~~~~~~~~~~ad~vvi~t~~~~f-~~~--d~~~~~~~~~~~~~~i~D~rn~~~~------~~~~~~g~~y~ 466 (478)
T 3g79_A 404 ISDNLEEVVRNADAIVVLAGHSAY-SSL--KADWAKKVSAKANPVIIDGRNVIEP------DEFIGKGFVYK 466 (478)
T ss_dssp EESCHHHHHTTCSEEEECSCCHHH-HSC--CHHHHHHHHCCSSCEEEESSSCSCH------HHHHTTTCEEE
T ss_pred eecCHHHHHhcCCEEEEecCCHHH-Hhh--hHHHHHHHhccCCCEEEECCCCCCH------HHHHhcCCEEE
Confidence 467999999999999999887542 211 0012222233 37899998776532 23456677764
No 367
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=36.31 E-value=40 Score=29.84 Aligned_cols=71 Identities=7% Similarity=-0.030 Sum_probs=47.1
Q ss_pred CCEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEecCCCCh-HH----hhcCceEEEecCChhHHHHHHHHHHHhcCCc
Q 025140 56 GKGYVDVS-TVDGDTSKLINGHIKATGASFLEAPVSGSK-KP----AEDGQLIFLAAGDKSLYNTVAPLLDIMGKSR 126 (257)
Q Consensus 56 g~~ivd~S-T~~p~~~~~la~~~~~~G~~~vdapV~g~~-~~----a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~ 126 (257)
-.+.||.+ .-+++++.++++++++.|+.|++-|+...- .. .+.-..+|+.++.-.....++++++.=...+
T Consensus 227 ~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ga~d~ 303 (424)
T 3v3w_A 227 IHLLHDVHHRLTPIEAARLGKALEPYHLFWMEDAVPAENQESFKLIRQHTTTPLAVGEVFNSIHDCRELIQNQWIDY 303 (424)
T ss_dssp SEEEEECTTCCCHHHHHHHHHHHGGGCCSEEECCSCCSSTTHHHHHHHHCCSCEEECTTCCSGGGTHHHHHTTCCSE
T ss_pred CcEEEeCCCCCCHHHHHHHHHHHHhcCCCEEECCCChHhHHHHHHHHhhCCCCEEEccCcCCHHHHHHHHHcCCCCe
Confidence 36888986 467899999999999999999999985321 11 1222356776665444456667765433333
No 368
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=36.29 E-value=84 Score=26.87 Aligned_cols=66 Identities=15% Similarity=0.054 Sum_probs=44.6
Q ss_pred CCEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEecCCCC-hHHhh----cCceEEEecCChhHHHHHHHHHHH
Q 025140 56 GKGYVDVS-TVDGDTSKLINGHIKATGASFLEAPVSGS-KKPAE----DGQLIFLAAGDKSLYNTVAPLLDI 121 (257)
Q Consensus 56 g~~ivd~S-T~~p~~~~~la~~~~~~G~~~vdapV~g~-~~~a~----~g~l~i~~gg~~~~~~~~~~ll~~ 121 (257)
-.+.||.. .-+++++.++++.+++.|+.|++-|+... ..... .-..+++.+..-.....++++++.
T Consensus 185 ~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~ 256 (356)
T 3ro6_B 185 AVVRVDPNQSYDRDGLLRLDRLVQELGIEFIEQPFPAGRTDWLRALPKAIRRRIAADESLLGPADAFALAAP 256 (356)
T ss_dssp SEEEEECTTCCCHHHHHHHHHHHHHTTCCCEECCSCTTCHHHHHTSCHHHHHTEEESTTCCSHHHHHHHHSS
T ss_pred CEEEEeCCCCCCHHHHHHHHHHHHhcCCCEEECCCCCCcHHHHHHHHhcCCCCEEeCCcCCCHHHHHHHHhc
Confidence 35888986 46789999999999999999999998643 11111 112466666655545566666653
No 369
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=35.93 E-value=37 Score=29.45 Aligned_cols=72 Identities=11% Similarity=0.014 Sum_probs=47.8
Q ss_pred CCEEEEcCC-CCHHHHHHHHHHHHHc-CCcEEEecCCCCh-HHh----hcCceEEEecCChhHHHHHHHHHHHhcCCce
Q 025140 56 GKGYVDVST-VDGDTSKLINGHIKAT-GASFLEAPVSGSK-KPA----EDGQLIFLAAGDKSLYNTVAPLLDIMGKSRF 127 (257)
Q Consensus 56 g~~ivd~ST-~~p~~~~~la~~~~~~-G~~~vdapV~g~~-~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~ 127 (257)
-.+.||... -+++++.++.+.+++. |+.|++-|+...- ... +.-..+|+.++.-...+.++++++.=..+++
T Consensus 185 ~~l~vDan~~~~~~~a~~~~~~l~~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v 263 (382)
T 2gdq_A 185 ITMILDANQSYDAAAAFKWERYFSEWTNIGWLEEPLPFDQPQDYAMLRSRLSVPVAGGENMKGPAQYVPLLSQRCLDII 263 (382)
T ss_dssp SEEEEECTTCCCHHHHHTTHHHHTTCSCEEEEECCSCSSCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSEE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHhhccCCeEEECCCCcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEE
Confidence 457889863 5789999999999999 9999999985321 111 1223466666655445677777765443433
No 370
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=35.32 E-value=40 Score=29.89 Aligned_cols=71 Identities=8% Similarity=-0.045 Sum_probs=47.1
Q ss_pred CCEEEEcCC-CCHHHHHHHHHHHHHcCCcEEEecCCCCh-HH----hhcCceEEEecCChhHHHHHHHHHHHhcCCc
Q 025140 56 GKGYVDVST-VDGDTSKLINGHIKATGASFLEAPVSGSK-KP----AEDGQLIFLAAGDKSLYNTVAPLLDIMGKSR 126 (257)
Q Consensus 56 g~~ivd~ST-~~p~~~~~la~~~~~~G~~~vdapV~g~~-~~----a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~ 126 (257)
-.+.||... -+++++.++++++++.|+.|++-|+...- .. .+.-..+|+.++.-.....++++++.=...+
T Consensus 228 ~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~ 304 (425)
T 3vcn_A 228 VHLLHDVHHRLTPIEAARLGKDLEPYRLFWLEDSVPAENQAGFRLIRQHTTTPLAVGEIFAHVWDAKQLIEEQLIDY 304 (425)
T ss_dssp SEEEEECTTCCCHHHHHHHHHHHGGGCCSEEECCSCCSSTTHHHHHHHHCCSCEEECTTCCSGGGTHHHHHTTCCSE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCCChhhHHHHHHHHhcCCCCEEeCCCcCCHHHHHHHHHcCCCCe
Confidence 367889864 67899999999999999999999985321 11 1222346776665444456667765433333
No 371
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=35.26 E-value=1.1e+02 Score=22.84 Aligned_cols=65 Identities=14% Similarity=0.209 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHcCCcEEEecCCCChH-----------------HhhcCceEEEecCChhHHHHHHHHHHH-hcCCceec
Q 025140 68 DTSKLINGHIKATGASFLEAPVSGSKK-----------------PAEDGQLIFLAAGDKSLYNTVAPLLDI-MGKSRFYL 129 (257)
Q Consensus 68 ~~~~~la~~~~~~G~~~vdapV~g~~~-----------------~a~~g~l~i~~gg~~~~~~~~~~ll~~-~~~~~~~~ 129 (257)
..-+...+++...|...+..|+...+. .+..-...++++||.+ |..+-..++. +|.+++.+
T Consensus 61 ~~~~~~~~~L~~~g~~v~~~p~~~~~~~~~k~~~Dv~laiD~~~~a~~~d~~vLvSgD~D-F~plv~~lr~~~G~~V~v~ 139 (165)
T 2qip_A 61 PKQRQFHHILRGVGFEVMLKPYIQRRDGSAKGDWDVGITLDAIEIAPDVDRVILVSGDGD-FSLLVERIQQRYNKKVTVY 139 (165)
T ss_dssp HHHHHHHHHHHHHTCEEEECCCCCCSSCCCSCCCHHHHHHHHHHHGGGCSEEEEECCCGG-GHHHHHHHHHHHCCEEEEE
T ss_pred hhHHHHHHHHHHCCcEEEEEeeeeccCCccCCCccHHHHHHHHHhhccCCEEEEEECChh-HHHHHHHHHHHcCcEEEEE
Confidence 444567788888999999999752111 1122344889999985 5555555666 79988888
Q ss_pred CCCc
Q 025140 130 GDVG 133 (257)
Q Consensus 130 G~~G 133 (257)
|..+
T Consensus 140 g~~~ 143 (165)
T 2qip_A 140 GVPR 143 (165)
T ss_dssp ECGG
T ss_pred eCCC
Confidence 8754
No 372
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=34.86 E-value=16 Score=32.80 Aligned_cols=67 Identities=9% Similarity=-0.018 Sum_probs=40.3
Q ss_pred CccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEE
Q 025140 12 RCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 12 Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~v 85 (257)
+.+.++++.|+++++|+|++++..++ .++. ..+.+...+....+|+|.-.+-.. ..+.+++.|..|.
T Consensus 395 ~~~~~~~~~~~~~~ad~~vi~t~~~~-f~~~--~~~~~~~~~~~~~~i~D~r~~~~~----~~~~~~~~g~~~~ 461 (467)
T 2q3e_A 395 LVTISKDPYEACDGAHAVVICTEWDM-FKEL--DYERIHKKMLKPAFIFDGRRVLDG----LHNELQTIGFQIE 461 (467)
T ss_dssp HEEECSSHHHHHTTCSEEEECSCCGG-GGGS--CHHHHHHHSCSSCEEEESSCTTTT----CHHHHHHHTCEEE
T ss_pred ceeecCCHHHHHhCCcEEEEecCChh-hhcC--CHHHHHHhcCCCCEEEeCCCcCCc----hHHHHHhcCcEEE
Confidence 34556789999999999999998754 2111 001222334444558998766432 1234556677764
No 373
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=34.80 E-value=97 Score=22.21 Aligned_cols=61 Identities=10% Similarity=-0.018 Sum_probs=38.2
Q ss_pred cCCEEEEecCChH--------HHHHHhcCCCcccccCCCCCEEEEcCCC------CHHHHHHHHHHHHHcCCcEEEec
Q 025140 25 SCDVTFAMLADPE--------SAMDVACGKHGAASGMGPGKGYVDVSTV------DGDTSKLINGHIKATGASFLEAP 88 (257)
Q Consensus 25 ~advvi~~l~~~~--------~v~~v~~~~~~~~~~l~~g~~ivd~ST~------~p~~~~~la~~~~~~G~~~vdap 88 (257)
++|.||+..|+.. .++..+ +.+.....+++.+.-.++. .....+.+.+.+++.|...+..+
T Consensus 49 ~~d~ii~g~pty~~~~G~~p~~~~~fl---~~l~~~~l~~k~~~vfg~G~~~y~~~~~a~~~l~~~l~~~G~~~~~~~ 123 (148)
T 3f6r_A 49 GYDAVLFGCSAWGMEDLEMQDDFLSLF---EEFDRIGLAGRKVAAFASGDQEYEHFCGAVPAIEERAKELGATIIAEG 123 (148)
T ss_dssp TCSEEEEEECEECSSSCEECHHHHHHH---TTGGGTCCTTCEEEEEEEECTTSSSTTTHHHHHHHHHHHTTCEECSCC
T ss_pred cCCEEEEEecccCCCCCCCcHHHHHHH---HHhhccCCCCCEEEEEEeCCCCHHHHHHHHHHHHHHHHHcCCEEeecc
Confidence 7899999887643 566666 3332222355554444432 23557889999999998776443
No 374
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=34.78 E-value=1.6e+02 Score=24.52 Aligned_cols=102 Identities=11% Similarity=-0.005 Sum_probs=52.9
Q ss_pred CCCCHHHHHHHHHHHHHcCCcEEEecCCC-ChHHh----------hcCceEEEecCChhHHHHHHHHHHHhcCCceec-C
Q 025140 63 STVDGDTSKLINGHIKATGASFLEAPVSG-SKKPA----------EDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFYL-G 130 (257)
Q Consensus 63 ST~~p~~~~~la~~~~~~G~~~vdapV~g-~~~~a----------~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~~-G 130 (257)
...+++...++++.+.+.|+++|++--.. +|... ..-++..++-+.+..++++...+...+...+++ .
T Consensus 22 ~~~~~~~K~~i~~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~~~~i~~l~~~~~~di~~a~~~~~~ag~~~v~i~~ 101 (293)
T 3ewb_X 22 VNFDVKEKIQIALQLEKLGIDVIEAGFPISSPGDFECVKAIAKAIKHCSVTGLARCVEGDIDRAEEALKDAVSPQIHIFL 101 (293)
T ss_dssp -CCCHHHHHHHHHHHHHHTCSEEEEECGGGCHHHHHHHHHHHHHCCSSEEEEEEESSHHHHHHHHHHHTTCSSEEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCccHHHHHHHHHHhcCCCEEEEEecCCHHHHHHHHHHHhhcCCCEEEEEe
Confidence 36789999999999999999999985321 12111 111233444455444444444333334433332 2
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 025140 131 DVGNGAAMKLVVNMIMGSMMATFSEGLLHSEKVGL 165 (257)
Q Consensus 131 ~~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gl 165 (257)
+.-..+. +.-.|.-..-.+..+.+...++++.|+
T Consensus 102 ~~Sd~~~-~~nl~~s~~e~l~~~~~~v~~a~~~g~ 135 (293)
T 3ewb_X 102 ATSDVHM-EYKLKMSRAEVLASIKHHISYARQKFD 135 (293)
T ss_dssp ECSHHHH-HHTTCCCHHHHHHHHHHHHHHHHTTCS
T ss_pred cCcHHHH-HHHhCCCHHHHHHHHHHHHHHHHhCCC
Confidence 2211221 111122223344566777788887664
No 375
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=34.72 E-value=42 Score=29.56 Aligned_cols=72 Identities=7% Similarity=-0.017 Sum_probs=48.7
Q ss_pred CCEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEec-CCCC-hHHh----hcCceEEEecCChhHHHHHHHHHHHhcCCce
Q 025140 56 GKGYVDVS-TVDGDTSKLINGHIKATGASFLEAP-VSGS-KKPA----EDGQLIFLAAGDKSLYNTVAPLLDIMGKSRF 127 (257)
Q Consensus 56 g~~ivd~S-T~~p~~~~~la~~~~~~G~~~vdap-V~g~-~~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~ 127 (257)
-.+.||.+ .-+++++.++++.+++.|+.|++-| +... .... +.-..+|+.+..-.....++++++.=.-.++
T Consensus 214 ~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v 292 (410)
T 3dip_A 214 IEIMCELHSLWGTHAAARICNALADYGVLWVEDPIAKMDNIPAVADLRRQTRAPICGGENLAGTRRFHEMLCADAIDFV 292 (410)
T ss_dssp SEEEEECTTCBCHHHHHHHHHHGGGGTCSEEECCBSCTTCHHHHHHHHHHHCCCEEECTTCCSHHHHHHHHHTTCCSEE
T ss_pred ceEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCCCCcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCeE
Confidence 36889986 4678999999999999999999999 6532 2211 1123467776665556677777765433333
No 376
>3ndc_A Precorrin-4 C(11)-methyltransferase; SAH; HET: SAH; 2.00A {Rhodobacter capsulatus} PDB: 3nei_A
Probab=34.44 E-value=1.9e+02 Score=23.52 Aligned_cols=77 Identities=19% Similarity=0.248 Sum_probs=39.2
Q ss_pred HHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHH-HHHHHHHHHcCCcEEEecCCCChHHhh
Q 025140 19 PDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTS-KLINGHIKATGASFLEAPVSGSKKPAE 97 (257)
Q Consensus 19 ~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~-~~la~~~~~~G~~~vdapV~g~~~~a~ 97 (257)
..+++++||+|+..=.-- ...+++.+.+++.+++......+.. +.+.+.++ .|
T Consensus 23 A~~~L~~AdvV~~~~~~~---------~~~ll~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~G---------------- 76 (264)
T 3ndc_A 23 GRDLIASCPVCLYAGSLV---------PEALLAHCPPGAKIVNTAPMSLDAIIDTIAEAHA-AG---------------- 76 (264)
T ss_dssp HHHHHHHCSEEEECSTTS---------CGGGGGGSCTTCEEEECTTSCHHHHHHHHHHHHH-HT----------------
T ss_pred HHHHHHcCCEEEEECCCC---------CHHHHhhcCCCCEEEecCCCCHHHHHHHHHHHHH-CC----------------
Confidence 457889999998632110 0123344556777777654333322 22222221 22
Q ss_pred cCceEEEecCChhHHHHHHHHHHHh
Q 025140 98 DGQLIFLAAGDKSLYNTVAPLLDIM 122 (257)
Q Consensus 98 ~g~l~i~~gg~~~~~~~~~~ll~~~ 122 (257)
....++.+||.-.|.....+++.+
T Consensus 77 -~~Va~L~~GDP~iyg~~~~l~~~l 100 (264)
T 3ndc_A 77 -QDVARLHSGDLSIWSAMGEQLRRL 100 (264)
T ss_dssp -CCEEEEESBCTTSSCSHHHHHHHH
T ss_pred -CeEEEEeCCCCccccHHHHHHHHH
Confidence 233555567776666555555444
No 377
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=34.21 E-value=86 Score=27.28 Aligned_cols=72 Identities=8% Similarity=0.040 Sum_probs=47.5
Q ss_pred CCEEEEcCC-CCHHHHHHHHHHHHHcCCcEEEecCCCCh-HHh----hcCceEEEecCChhHHHHHHHHHHHhcCCce
Q 025140 56 GKGYVDVST-VDGDTSKLINGHIKATGASFLEAPVSGSK-KPA----EDGQLIFLAAGDKSLYNTVAPLLDIMGKSRF 127 (257)
Q Consensus 56 g~~ivd~ST-~~p~~~~~la~~~~~~G~~~vdapV~g~~-~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~ 127 (257)
-.+.||... -+++++.++++.+++.|+.|++-|+...- ... +.-..+|+.++.-...+.++++++.=..+++
T Consensus 219 ~~l~vDan~~~~~~~ai~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v 296 (410)
T 2gl5_A 219 ADIIVEIHSLLGTNSAIQFAKAIEKYRIFLYEEPIHPLNSDNMQKVSRSTTIPIATGERSYTRWGYRELLEKQSIAVA 296 (410)
T ss_dssp SEEEEECTTCSCHHHHHHHHHHHGGGCEEEEECSSCSSCHHHHHHHHHHCSSCEEECTTCCTTHHHHHHHHTTCCSEE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhcCCCeEECCCChhhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEE
Confidence 457889864 57899999999999999999999985321 111 1223466666554445667777765433333
No 378
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=33.76 E-value=1.7e+02 Score=25.22 Aligned_cols=72 Identities=17% Similarity=0.141 Sum_probs=47.4
Q ss_pred CCEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEecCCCC-hHHh----hcCceEEEecCChhHHHHHHHHHHHhcCCce
Q 025140 56 GKGYVDVS-TVDGDTSKLINGHIKATGASFLEAPVSGS-KKPA----EDGQLIFLAAGDKSLYNTVAPLLDIMGKSRF 127 (257)
Q Consensus 56 g~~ivd~S-T~~p~~~~~la~~~~~~G~~~vdapV~g~-~~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~ 127 (257)
-.+.||.. .-+++++.++.+.+++.|+.|++-|+.-. .... +.-..+|..+..-.....++++++.=+.+++
T Consensus 195 ~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~~~d~v 272 (382)
T 3dgb_A 195 ASVRVDVNQAWDEAVALRACRILGGNGIDLIEQPISRNNRAGMVRLNASSPAPIMADESIECVEDAFNLAREGAASVF 272 (382)
T ss_dssp SEEEEECTTCBCHHHHHHHHHHHHTTTCCCEECCBCTTCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEE
T ss_pred CeEEEeCCCCCCHHHHHHHHHHHhhcCcCeeeCCCCccCHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCCCEE
Confidence 36888985 46789999999999999999999998632 1111 1223466666554445567777765444443
No 379
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=33.45 E-value=1.2e+02 Score=25.85 Aligned_cols=66 Identities=18% Similarity=0.241 Sum_probs=44.3
Q ss_pred CCEEEEcCC-CCHHHHHHHHHHHHHcCCcEEEecCCCChH-H----hhcCceEEEecCChhHHHHHHHHHHH
Q 025140 56 GKGYVDVST-VDGDTSKLINGHIKATGASFLEAPVSGSKK-P----AEDGQLIFLAAGDKSLYNTVAPLLDI 121 (257)
Q Consensus 56 g~~ivd~ST-~~p~~~~~la~~~~~~G~~~vdapV~g~~~-~----a~~g~l~i~~gg~~~~~~~~~~ll~~ 121 (257)
-.+.||... -+++++.++.+.+++.++.|++-|+.-.-. . .+.-..+|..|-.-.....++++++.
T Consensus 189 ~~l~vDaN~~~~~~~A~~~~~~l~~~~~~~iEeP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~ 260 (370)
T 2chr_A 189 AYLRVDVNQAWDEQVASVYIPELEALGVELIEQPVGRENTQALRRLSDNNRVAIMADESLSTLASAFDLARD 260 (370)
T ss_dssp SEEEEECTTCCCTHHHHHHHHHHHTTTCCEEECCSCSSCHHHHHHHHHHCSSEEEESSSCCSHHHHHHHHTT
T ss_pred cEEEecCCCCCCHHHHHHHHHHHHhcCCceecCCCChhhhhhhhHHhhhccCCccCCccCCCHHHHHHHHHc
Confidence 357889864 678999999999999999999999964321 1 12234466655433444556666643
No 380
>2lfc_A Fumarate reductase, flavoprotein subunit; structural genomics, northeast structural genomics consortiu PSI-biology; NMR {Lactobacillus plantarum}
Probab=33.19 E-value=43 Score=25.15 Aligned_cols=33 Identities=21% Similarity=0.167 Sum_probs=27.0
Q ss_pred HHHHHhcCCCcHHHHHHHHHHHHHHHCCCCCcch
Q 025140 213 LGLAESVSQSTPIAAAANELYKVAKSHGLSDEDF 246 (257)
Q Consensus 213 ~~~a~~~g~~~p~~~~~~~~~~~a~~~g~g~~d~ 246 (257)
.++|++.|+|..-+..+.+.|...++.|. +.||
T Consensus 99 eeLA~~~gid~~~L~~TV~~yN~~~~~G~-D~~F 131 (160)
T 2lfc_A 99 ESAAEQAGIVVDELVQTVKNYQGYVQDGH-DHDF 131 (160)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHHHHHTTSC-CCSS
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHcCC-Cccc
Confidence 46777889999999999999999999873 4443
No 381
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=33.07 E-value=25 Score=31.73 Aligned_cols=64 Identities=9% Similarity=0.083 Sum_probs=39.4
Q ss_pred cccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEE
Q 025140 14 RYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE 86 (257)
Q Consensus 14 ~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vd 86 (257)
+.++++.|+++++|+||+++..++ .++. ..+.+.+.+...++|+|.-.+-.. +.+++.|..|.-
T Consensus 401 ~~~~~~~~~~~~ad~~vi~t~~~~-f~~~--~~~~~~~~~~~~~~i~D~r~~~~~------~~~~~~g~~~~~ 464 (481)
T 2o3j_A 401 TVESDPYAAARGAHAIVVLTEWDE-FVEL--NYSQIHNDMQHPAAIFDGRLILDQ------KALREIGFRTFA 464 (481)
T ss_dssp EEESSHHHHHTTCSEEEECSCCGG-GTTS--CHHHHHHHSCSSCEEEESSSCSCH------HHHHHHTCEEEE
T ss_pred eecCCHHHHHcCCCEEEEcCCcHH-hhcc--CHHHHHHhcCCCCEEEECCCCCCH------HHHHhcCcEEEE
Confidence 456788899999999999998754 1111 001222334445689998776531 134556877743
No 382
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=33.04 E-value=1.7e+02 Score=23.60 Aligned_cols=30 Identities=10% Similarity=-0.001 Sum_probs=17.9
Q ss_pred CCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEe
Q 025140 56 GKGYVDVSTVDGDTSKLINGHIKATGASFLEA 87 (257)
Q Consensus 56 g~~ivd~ST~~p~~~~~la~~~~~~G~~~vda 87 (257)
..++||+| +|+...+....+.++|+..|=+
T Consensus 46 ~DvvIDfT--~p~a~~~~~~~a~~~g~~~Vig 75 (245)
T 1p9l_A 46 TEVVIDFT--HPDVVMGNLEFLIDNGIHAVVG 75 (245)
T ss_dssp CCEEEECS--CTTTHHHHHHHHHHTTCEEEEC
T ss_pred CcEEEEcc--ChHHHHHHHHHHHHcCCCEEEc
Confidence 34667776 4555566666666666665443
No 383
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=32.89 E-value=1.2e+02 Score=23.17 Aligned_cols=69 Identities=10% Similarity=-0.012 Sum_probs=41.8
Q ss_pred HHHHHhcCCEEEEecCCh-----HHHHHHhcCCCccc----ccCCCCCEEE--EcC-CC---CHHHHHHHHHHHHHcCCc
Q 025140 19 PDEVAASCDVTFAMLADP-----ESAMDVACGKHGAA----SGMGPGKGYV--DVS-TV---DGDTSKLINGHIKATGAS 83 (257)
Q Consensus 19 ~~ea~~~advvi~~l~~~-----~~v~~v~~~~~~~~----~~l~~g~~iv--d~S-T~---~p~~~~~la~~~~~~G~~ 83 (257)
..+-+.++|.||+..|.. ..++..+ +.+. ....+|+.++ -++ +. .......+...+...|..
T Consensus 72 ~~~~l~~aD~ii~gsP~y~~~~~~~lk~~l---d~~~~~~~~~~l~gK~~~~~~t~g~~~~~~~~~~~~l~~~l~~~g~~ 148 (211)
T 1ydg_A 72 TPADLEWAEAIVFSSPTRFGGATSQMRAFI---DTLGGLWSSGKLANKTFSAMTSAQNVNGGQETTLQTLYMTAMHWGAV 148 (211)
T ss_dssp CHHHHHHCSEEEEEEEEETTEECHHHHHHH---HTTHHHHHTTTTTTCEEEEEEEESSTTSSTTHHHHHHHHHHHTTTCE
T ss_pred HHHHHHHCCEEEEEcCccccCccHHHHHHH---HHhccccccccCCCCEEEEEEeCCCCCCChHHHHHHHHHHHHHCCCE
Confidence 345677899999998873 5667666 3321 1223455432 222 21 124556778888888998
Q ss_pred EEEecCC
Q 025140 84 FLEAPVS 90 (257)
Q Consensus 84 ~vdapV~ 90 (257)
++..++.
T Consensus 149 ~v~~~~~ 155 (211)
T 1ydg_A 149 LTPPGYT 155 (211)
T ss_dssp ECCCTTC
T ss_pred EeCCCCC
Confidence 8876654
No 384
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=32.80 E-value=56 Score=27.68 Aligned_cols=62 Identities=13% Similarity=0.038 Sum_probs=40.9
Q ss_pred HHHHhcCCEEEEecCChHHHHHHhcCCCcc---cccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEe
Q 025140 20 DEVAASCDVTFAMLADPESAMDVACGKHGA---ASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEA 87 (257)
Q Consensus 20 ~ea~~~advvi~~l~~~~~v~~v~~~~~~~---~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vda 87 (257)
.+.+.++|+||-+.|-.-.-. ....+ .+.+.++.+++|+.-.+.+| .+.++++++|++.+|.
T Consensus 215 ~~~l~~~DiIINaTp~Gm~~~----~~~~~~~~~~~l~~~~~v~D~vY~P~~T--~ll~~A~~~G~~~~~G 279 (312)
T 3t4e_A 215 TEALASADILTNGTKVGMKPL----ENESLIGDVSLLRPELLVTECVYNPHMT--KLLQQAQQAGCKTIDG 279 (312)
T ss_dssp HHHHHHCSEEEECSSTTSTTS----TTCCSCCCGGGSCTTCEEEECCCSSSSC--HHHHHHHHTTCEEECH
T ss_pred HhhccCceEEEECCcCCCCCC----CCCcccCCHHHcCCCCEEEEeccCCCCC--HHHHHHHHCCCeEECc
Confidence 567788999999988642100 00111 13456889999999887665 4666778888876654
No 385
>3k1y_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, CDR100D; 2.50A {Corynebacterium diphtheriae} PDB: 3k20_A
Probab=32.75 E-value=21 Score=27.97 Aligned_cols=66 Identities=8% Similarity=-0.135 Sum_probs=37.4
Q ss_pred HHHHHhcCCEEEEecCCh-----HHHHHHhcCCCcccccCCCCCEEEEcCC-CCHHHH----HHHHHHHHHcCCcEEEe
Q 025140 19 PDEVAASCDVTFAMLADP-----ESAMDVACGKHGAASGMGPGKGYVDVST-VDGDTS----KLINGHIKATGASFLEA 87 (257)
Q Consensus 19 ~~ea~~~advvi~~l~~~-----~~v~~v~~~~~~~~~~l~~g~~ivd~ST-~~p~~~----~~la~~~~~~G~~~vda 87 (257)
..+.+.+||.||+..|.+ ..++..+ +-+......||.++-.+| ..+... ..+...+...|+..+..
T Consensus 79 ~~~~i~~AD~ivi~sP~Y~~~~~~~lK~~i---D~~~~~~l~gK~~~~v~t~G~~~~~~~~~~~L~~il~~lg~~vv~~ 154 (191)
T 3k1y_A 79 ITSALSASDGLVVATPVFKASYTGLFKMFF---DILDTDALTGMPTIIAATAGSARHSLVLDYALRPLLSYMRAVVVPT 154 (191)
T ss_dssp HHHHHHHCSEEEEEEECBTTBSCHHHHHHH---HHSCTTTTTTCEEEEEEEESSSTTTTHHHHTHHHHHHHTTCEECSC
T ss_pred HHHHHHHCCEEEEEcCccCCcCcHHHHHHH---HHhhhhhcCCCEEEEEEeCCCcchhhHHHHHHHHHHHHCCCEEcCc
Confidence 456677899999998874 4566666 333333445654433332 233322 22555666667766543
No 386
>2okt_A OSB synthetase, O-succinylbenzoic acid synthetase; enolase, structural genom protein structure initiative, PSI, nysgrc; 1.30A {Staphylococcus aureus subsp} PDB: 2ola_A 3h70_A
Probab=32.59 E-value=1.4e+02 Score=25.22 Aligned_cols=76 Identities=7% Similarity=-0.043 Sum_probs=48.2
Q ss_pred ccCCCCCEEEEcCC-CCHHHHHHHHHHHHHcCCcEEEecCCCChHHh--h-cCceEEEecCChhHHHHHHHHHHHhcCCc
Q 025140 51 SGMGPGKGYVDVST-VDGDTSKLINGHIKATGASFLEAPVSGSKKPA--E-DGQLIFLAAGDKSLYNTVAPLLDIMGKSR 126 (257)
Q Consensus 51 ~~l~~g~~ivd~ST-~~p~~~~~la~~~~~~G~~~vdapV~g~~~~a--~-~g~l~i~~gg~~~~~~~~~~ll~~~~~~~ 126 (257)
+....-.+.||... -+++++ ++.+.+++.++.|++-|+.-.-... + .-..+|..+-.-.....++++++.=+.++
T Consensus 162 ~~~~~~~l~vDaN~~~~~~~A-~~~~~l~~~~i~~iEqP~~~~d~~~~~~~~~~ipIa~dEs~~~~~~~~~~i~~~a~d~ 240 (342)
T 2okt_A 162 ELDFHFQLVIDANESLDRQDF-TQLQLLAREQVLYIEEPFKDISMLDEVADGTIPPIALDEKATSLLDIINLIELYNVKV 240 (342)
T ss_dssp TSSSCCEEEEECTTCCCGGGH-HHHHHHGGGCEEEEECCCSSGGGGGGSCTTSSCCEEESTTCCCHHHHHHHHHHSCCCE
T ss_pred HhCCCCeEEEECCCCCCHHHH-HHHHHHhhCCCcEEECCCCCccHHHHHHhcCCCCEEecCCCCCHHHHHHHHHhCCCCE
Confidence 33434468999865 478889 9999999999999999996442111 1 12345555433334556777776544443
Q ss_pred e
Q 025140 127 F 127 (257)
Q Consensus 127 ~ 127 (257)
+
T Consensus 241 i 241 (342)
T 2okt_A 241 V 241 (342)
T ss_dssp E
T ss_pred E
Confidence 3
No 387
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=32.57 E-value=50 Score=28.95 Aligned_cols=67 Identities=9% Similarity=0.073 Sum_probs=47.4
Q ss_pred CEEEEcCC-CCHHHHHHHHHHHHHcCCcEEEecCCCCh-HHh----hcCceEEEecCChhHHHHHHHHHHHhc
Q 025140 57 KGYVDVST-VDGDTSKLINGHIKATGASFLEAPVSGSK-KPA----EDGQLIFLAAGDKSLYNTVAPLLDIMG 123 (257)
Q Consensus 57 ~~ivd~ST-~~p~~~~~la~~~~~~G~~~vdapV~g~~-~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~ 123 (257)
.+.||... -+++++.++++++++.|+.|++-|+...- ... +.-..+|+.++.-.....++++++.=.
T Consensus 210 ~l~vDan~~~~~~~A~~~~~~l~~~~i~~iEeP~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a 282 (404)
T 4e5t_A 210 DLLFGTHGQFTVSGAKRLARRLEAYDPLWFEEPIPPEKPEDMAEVARYTSIPVATGERLCTKYEFSRVLETGA 282 (404)
T ss_dssp EEEECCCSCBCHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTC
T ss_pred eEEEeCCCCcCHHHHHHHHHHHhhcCCcEEECCCCcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCC
Confidence 57788753 57899999999999999999999986421 111 122457777776666667777776433
No 388
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=32.46 E-value=1.5e+02 Score=25.22 Aligned_cols=72 Identities=6% Similarity=-0.015 Sum_probs=45.6
Q ss_pred CCCEEEEcCC-CCHHHHHHHHHHHHHcCCcEEEecCCCCh-HHh----hcCceEEEecCChhHHHHHHHHHHHhcCCce
Q 025140 55 PGKGYVDVST-VDGDTSKLINGHIKATGASFLEAPVSGSK-KPA----EDGQLIFLAAGDKSLYNTVAPLLDIMGKSRF 127 (257)
Q Consensus 55 ~g~~ivd~ST-~~p~~~~~la~~~~~~G~~~vdapV~g~~-~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~ 127 (257)
.-.+.||... -++++ .++.+.+++.|+.|++-|+...- ... +.-..+++.+..-.....++++++.=..+++
T Consensus 182 ~~~l~vDan~~~~~~~-~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v 259 (369)
T 2zc8_A 182 EATLTADANSAYSLAN-LAQLKRLDELRLDYIEQPLAYDDLLDHAKLQRELSTPICLDESLTGAEKARKAIELGAGRVF 259 (369)
T ss_dssp TSCEEEECTTCCCGGG-HHHHHGGGGGCCSCEECCSCTTCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEE
T ss_pred CCeEEEecCCCCCHHH-HHHHHHHHhCCCcEEECCCCcccHHHHHHHHhhCCCCEEEcCccCCHHHHHHHHHhCCCCEE
Confidence 3468889864 46777 88999999999999999985321 111 1223456665554445667777765444443
No 389
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=32.43 E-value=91 Score=26.96 Aligned_cols=70 Identities=20% Similarity=0.117 Sum_probs=46.4
Q ss_pred CCEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEecCCCC-hHH----hhcCceEEEecCChhHHHHHHHHHHHhcCC
Q 025140 56 GKGYVDVS-TVDGDTSKLINGHIKATGASFLEAPVSGS-KKP----AEDGQLIFLAAGDKSLYNTVAPLLDIMGKS 125 (257)
Q Consensus 56 g~~ivd~S-T~~p~~~~~la~~~~~~G~~~vdapV~g~-~~~----a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~ 125 (257)
-.+.||.. .-+++++.++.+.+++.|+.|++-|+.-. ... ...-..+|..+..-.....++++++.=+.+
T Consensus 194 ~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d 269 (381)
T 3fcp_A 194 ASIRVDVNQAWDAATGAKGCRELAAMGVDLIEQPVSAHDNAALVRLSQQIETAILADEAVATAYDGYQLAQQGFTG 269 (381)
T ss_dssp CEEEEECTTCBCHHHHHHHHHHHHHTTCSEEECCBCTTCHHHHHHHHHHSSSEEEESTTCCSHHHHHHHHHTTCCS
T ss_pred CeEEEECCCCCCHHHHHHHHHHHhhcCccceeCCCCcccHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCC
Confidence 36889986 46789999999999999999999998632 111 112234666655444455666776543333
No 390
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=32.43 E-value=1.6e+02 Score=23.54 Aligned_cols=112 Identities=13% Similarity=0.056 Sum_probs=59.5
Q ss_pred hhcCccccCCHHHHHh--cCCEEEEecCChHHHHHHhcCC------CcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHc
Q 025140 9 YYSRCRYQPSPDEVAA--SCDVTFAMLADPESAMDVACGK------HGAASGMGPGKGYVDVSTVDGDTSKLINGHIKAT 80 (257)
Q Consensus 9 ~~~Ga~~~~s~~ea~~--~advvi~~l~~~~~v~~v~~~~------~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~ 80 (257)
+--|..++..-...+. +++++++.-.-.+.+++..... ....+....+.-+|-.+|..|+..+.+++.++ +
T Consensus 36 VVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~dL~~adLVIaAT~d~~~N~~I~~~ak-~ 114 (223)
T 3dfz_A 36 VVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGEEDLLNVFFIVVATNDQAVNKFVKQHIK-N 114 (223)
T ss_dssp EECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCGGGSSSCSEEEECCCCTHHHHHHHHHSC-T
T ss_pred EECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCHhHhCCCCEEEECCCCHHHHHHHHHHHh-C
Confidence 3334455545444442 4667666533334444443210 01111222455566688999999999998876 7
Q ss_pred CCc--EEEecCCCC---hHHhhcCceEEEec--CC-hhHHHHHHHHHHH
Q 025140 81 GAS--FLEAPVSGS---KKPAEDGQLIFLAA--GD-KSLYNTVAPLLDI 121 (257)
Q Consensus 81 G~~--~vdapV~g~---~~~a~~g~l~i~~g--g~-~~~~~~~~~ll~~ 121 (257)
|+- .+|.|-.+. |.-...|.+.|.++ |. ...-.+++.-++.
T Consensus 115 gi~VNvvD~p~~~~f~~Paiv~rg~l~iaIST~G~sP~la~~iR~~ie~ 163 (223)
T 3dfz_A 115 DQLVNMASSFSDGNIQIPAQFSRGRLSLAISTDGASPLLTKRIKEDLSS 163 (223)
T ss_dssp TCEEEC-----CCSEECCEEEEETTEEEEEECTTSCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCcccCeEEEeeEEEeCCEEEEEECCCCCcHHHHHHHHHHHH
Confidence 764 378776443 66667888888886 33 3333455555543
No 391
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=32.24 E-value=21 Score=30.62 Aligned_cols=36 Identities=11% Similarity=-0.043 Sum_probs=23.0
Q ss_pred HhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCC
Q 025140 23 AASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTV 65 (257)
Q Consensus 23 ~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~ 65 (257)
.+++|+||.|+|...+.+.+ .. .+..|..+||.|+-
T Consensus 63 ~~~vDvVf~a~g~~~s~~~a----~~---~~~~G~~vId~s~~ 98 (336)
T 2r00_A 63 WSQVHIALFSAGGELSAKWA----PI---AAEAGVVVIDNTSH 98 (336)
T ss_dssp GGGCSEEEECSCHHHHHHHH----HH---HHHTTCEEEECSST
T ss_pred hcCCCEEEECCCchHHHHHH----HH---HHHcCCEEEEcCCc
Confidence 36789999998876543322 11 22356788888875
No 392
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=32.24 E-value=52 Score=28.83 Aligned_cols=68 Identities=12% Similarity=0.179 Sum_probs=42.9
Q ss_pred chhhhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcE
Q 025140 5 NNAFYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASF 84 (257)
Q Consensus 5 ~~~~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ 84 (257)
.+++.+.||++. |+.+ ||+|+ .|.-|.. .+ .+.+++|++++-..-.. ..+++.+.+.++|+..
T Consensus 69 D~~Y~~aGa~i~----~~~~-adiIl-kVk~p~~-~e--------~~~l~~g~~l~~~lh~~--~~~~l~~~l~~~~it~ 131 (381)
T 3p2y_A 69 DADYERAGATIG----DPWP-ADVVV-KVNPPTS-DE--------ISQLKPGSVLIGFLAPR--TQPELASRLRIADVTA 131 (381)
T ss_dssp HHHHHHTTCEES----CCTT-SSEEE-CSSCCCH-HH--------HTTSCTTCEEEECCCTT--TCHHHHHHHHHTTCEE
T ss_pred hHHHHHCCCEEe----eeec-CCEEE-EeCCCCh-hH--------HhhccCCCEEEEEeccc--cCHHHHHHHHHCCCeE
Confidence 356788898887 3455 88874 4433322 11 23467889887765443 3456777778888888
Q ss_pred EEecC
Q 025140 85 LEAPV 89 (257)
Q Consensus 85 vdapV 89 (257)
++--.
T Consensus 132 ia~E~ 136 (381)
T 3p2y_A 132 FAMES 136 (381)
T ss_dssp EEGGG
T ss_pred EEeec
Confidence 76543
No 393
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=31.80 E-value=64 Score=28.56 Aligned_cols=72 Identities=6% Similarity=-0.043 Sum_probs=47.7
Q ss_pred CCEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEecCCCChH-H----hhcCceEEEecCChhHHHHHHHHHHHhcCCce
Q 025140 56 GKGYVDVS-TVDGDTSKLINGHIKATGASFLEAPVSGSKK-P----AEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRF 127 (257)
Q Consensus 56 g~~ivd~S-T~~p~~~~~la~~~~~~G~~~vdapV~g~~~-~----a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~ 127 (257)
-.+.||.. .-+++++.++++.+++.|+.|++-|+...-. . .+.-..+|+.+..-.....++++++.=...++
T Consensus 229 ~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ga~d~v 306 (426)
T 4e4f_A 229 EHLLHDMHHRLTPIEAARFGKSVEDYRLFWMEDPTPAENQACFRLIRQHTVTPIAVGEVFNSIWDCKQLIEEQLIDYI 306 (426)
T ss_dssp SEEEEECTTCSCHHHHHHHHHHTGGGCCSEEECCSCCSSGGGGHHHHTTCCSCEEECTTCCSGGGTHHHHHTTCCSEE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHhhcCCCEEECCCChHHHHHHHHHHhcCCCCEEeCCCcCCHHHHHHHHHcCCCCEE
Confidence 36788886 4688999999999999999999999864211 1 12223467766654444556677654433333
No 394
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=31.55 E-value=1.1e+02 Score=26.70 Aligned_cols=76 Identities=9% Similarity=0.030 Sum_probs=47.6
Q ss_pred CCCCCEEEEcC-CCCHHHHHHHHHHH--HHcCCcEEEecCCCC-h-HH---hhcCceEEEecCChhHHHHHHHHHHHhcC
Q 025140 53 MGPGKGYVDVS-TVDGDTSKLINGHI--KATGASFLEAPVSGS-K-KP---AEDGQLIFLAAGDKSLYNTVAPLLDIMGK 124 (257)
Q Consensus 53 l~~g~~ivd~S-T~~p~~~~~la~~~--~~~G~~~vdapV~g~-~-~~---a~~g~l~i~~gg~~~~~~~~~~ll~~~~~ 124 (257)
...-.+.||.. .-+++++.++.+.+ ++.++.|++-|+... . .. .+.-..+|..+-.-.....++++++.=+.
T Consensus 215 ~~d~~L~vDaN~~w~~~~A~~~~~~L~~~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~ 294 (393)
T 3u9i_A 215 APTARLILDGNCGYTAPDALRLLDMLGVHGIVPALFEQPVAKDDEEGLRRLTATRRVPVAADESVASATDAARLARNAAV 294 (393)
T ss_dssp STTSEEEEECCSCCCHHHHHHHHHTTTTTTCCCSEEECCSCTTCTTHHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCC
T ss_pred CCCCeEEEEccCCCCHHHHHHHHHHHhhCCCCeEEEECCCCCCcHHHHHHHHhhCCCcEEeCCcCCCHHHHHHHHHcCCC
Confidence 33447889986 46789999999999 778999999999632 1 11 12223455554333334556666665444
Q ss_pred Ccee
Q 025140 125 SRFY 128 (257)
Q Consensus 125 ~~~~ 128 (257)
.++.
T Consensus 295 d~i~ 298 (393)
T 3u9i_A 295 DVLN 298 (393)
T ss_dssp SEEE
T ss_pred CEEE
Confidence 4443
No 395
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=31.44 E-value=13 Score=31.92 Aligned_cols=60 Identities=7% Similarity=0.165 Sum_probs=32.0
Q ss_pred cccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCC-HHHHHHHHHHHHHc
Q 025140 14 RYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVD-GDTSKLINGHIKAT 80 (257)
Q Consensus 14 ~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~-p~~~~~la~~~~~~ 80 (257)
.+.+|+.+++ +.|+|+.|.++.....+.. .+.+..|+-||-.+--. ....+++.+.++++
T Consensus 56 ~~~~d~~~ll-~iDvVve~t~~~~~a~~~~------~~AL~aGKhVVtaNkkpla~~~~eL~~~A~~~ 116 (332)
T 2ejw_A 56 LLRAEPFDLL-EADLVVEAMGGVEAPLRLV------LPALEAGIPLITANKALLAEAWESLRPFAEEG 116 (332)
T ss_dssp GEESSCCCCT-TCSEEEECCCCSHHHHHHH------HHHHHTTCCEEECCHHHHHHSHHHHHHHHHTT
T ss_pred cccCCHHHHh-CCCEEEECCCCcHHHHHHH------HHHHHcCCeEEECCchhHHHHHHHHHHHHHhC
Confidence 3456666766 7788888888764433332 12334555555432110 14555666655555
No 396
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=31.39 E-value=1.8e+02 Score=22.41 Aligned_cols=70 Identities=9% Similarity=0.038 Sum_probs=37.3
Q ss_pred HHHHHhcCCEEEEecCCh-----HHHHHHhcC-CCcccccCCCCCEEEEcC--CCC---HHHHHHHHHHHHHcCCcEEEe
Q 025140 19 PDEVAASCDVTFAMLADP-----ESAMDVACG-KHGAASGMGPGKGYVDVS--TVD---GDTSKLINGHIKATGASFLEA 87 (257)
Q Consensus 19 ~~ea~~~advvi~~l~~~-----~~v~~v~~~-~~~~~~~l~~g~~ivd~S--T~~---p~~~~~la~~~~~~G~~~vda 87 (257)
..+.+++||.+|++.|-+ ..++..+.= ..........||.+.-.| ... -.....+...+...|+..+..
T Consensus 61 l~~~i~~aD~~ii~tPeYn~s~pg~LKn~iDwlsr~~~~~~~~gKpv~~v~~S~G~~Gg~~a~~~Lr~vl~~lg~~v~~~ 140 (190)
T 3u7r_A 61 LKDRIEHSDAVLAITPEYNRSYPGMIKNAIDWATRPYGQNSWKGKPAAVIGTSPGVIGAALAQARLKNDLLHVGTVMMSM 140 (190)
T ss_dssp HHHHHHTSSEEEEECCCBTTBCCHHHHHHHHHHHCSTTCCTTTTCEEEEEEEESSTTTTHHHHHHHHHHHHTTTCEECCC
T ss_pred HHHHHHhCCcEEEechhhcccCCHHHHHHHHHhcccccCCccCCCEEEEEEeCCchhhHHHHHHHHHHHHHHcCCEEccC
Confidence 457788999999999985 345655510 000112234566544433 222 222333445555567666554
Q ss_pred c
Q 025140 88 P 88 (257)
Q Consensus 88 p 88 (257)
|
T Consensus 141 p 141 (190)
T 3u7r_A 141 P 141 (190)
T ss_dssp S
T ss_pred C
Confidence 4
No 397
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=31.25 E-value=36 Score=21.26 Aligned_cols=22 Identities=14% Similarity=0.203 Sum_probs=18.5
Q ss_pred HHHHHHHHcCCCHHHHHHHHhh
Q 025140 155 EGLLHSEKVGLDPNVLVEVVSQ 176 (257)
Q Consensus 155 Ea~~la~~~Gld~~~~~~~l~~ 176 (257)
..-.+++++|++.+.++++|.+
T Consensus 27 dI~~~a~kygV~kdeV~~~Lrr 48 (59)
T 2xvc_A 27 DIEHFSKVYGVEKQEVVKLLEA 48 (59)
T ss_dssp EHHHHHHHHCCCHHHHHHHHHH
T ss_pred eHHHHHHHhCCCHHHHHHHHHH
Confidence 3446889999999999999976
No 398
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=31.05 E-value=53 Score=28.79 Aligned_cols=68 Identities=12% Similarity=0.168 Sum_probs=42.8
Q ss_pred hhhhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEE
Q 025140 6 NAFYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 6 ~~~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~v 85 (257)
+.+.+.|+++.++ +++.+ +|+|+. +..+. .+.+ +.+.++..+|-.... ......-+.+.++|+..+
T Consensus 55 ~~y~~aGa~i~~~-~~~~~-adiil~-vk~p~--~~~i-------~~l~~~~~li~~~~~--~~d~~~~~al~~~gI~v~ 120 (401)
T 1x13_A 55 KAFVQAGAEIVEG-NSVWQ-SEIILK-VNAPL--DDEI-------ALLNPGTTLVSFIWP--AQNPELMQKLAERNVTVM 120 (401)
T ss_dssp HHHHHHTCEEECG-GGGGS-SSEEEC-SSCCC--HHHH-------TTCCTTCEEEECCCG--GGCHHHHHHHHHTTCEEE
T ss_pred HHHHHCCCEEecc-HHHhc-CCeEEE-eCCCC--HHHH-------HHhcCCCcEEEEecC--CCCHHHHHHHHHCCCEEE
Confidence 4566789999888 77766 998764 43332 1222 345577777765543 233455567778898877
Q ss_pred Ee
Q 025140 86 EA 87 (257)
Q Consensus 86 da 87 (257)
+.
T Consensus 121 ~~ 122 (401)
T 1x13_A 121 AM 122 (401)
T ss_dssp EG
T ss_pred Ee
Confidence 54
No 399
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=30.71 E-value=46 Score=28.61 Aligned_cols=69 Identities=9% Similarity=0.114 Sum_probs=40.4
Q ss_pred hhhhhcCccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEE
Q 025140 6 NAFYYSRCRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 6 ~~~~~~Ga~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~v 85 (257)
+++.+.|+++.++..|+. +||+|+ .+..|. ..+ ...+.+|.+++.... +....++.+.+.+.|+..+
T Consensus 48 ~~y~~aga~i~~~~~~~~-~ad~i~-~vksP~-~~~--------~~~~~~g~~~~~y~~--~~~~~~l~~~l~~~gi~~~ 114 (361)
T 1pjc_A 48 QDYVQAGAQVVPSAKDAW-SREMVV-KVKEPL-PAE--------YDLMQKDQLLFTYLH--LAAARELTEQLMRVGLTAI 114 (361)
T ss_dssp HHHHHHTCEEESSHHHHH-TSSEEE-CSSCCC-GGG--------GGGCCTTCEEEECCC--GGGCHHHHHHHHHHTCEEE
T ss_pred HHHHHCCCEEECCHHHHh-cCCeEE-EECCCC-HHH--------HHhhcCCCEEEEEec--cccCHHHHHHHHHcCCeEE
Confidence 567778999999999999 999976 444332 111 122345654443332 2222345666666776665
Q ss_pred Ee
Q 025140 86 EA 87 (257)
Q Consensus 86 da 87 (257)
+.
T Consensus 115 ~~ 116 (361)
T 1pjc_A 115 AY 116 (361)
T ss_dssp EG
T ss_pred EE
Confidence 43
No 400
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=30.65 E-value=1e+02 Score=26.26 Aligned_cols=33 Identities=3% Similarity=-0.129 Sum_probs=26.0
Q ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEec
Q 025140 54 GPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAP 88 (257)
Q Consensus 54 ~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vdap 88 (257)
.+-.+||++ ++|.....+++.+.+.|.+|+|..
T Consensus 76 ~~~DvVi~~--~p~~~~~~v~~~~~~~g~~yvD~s 108 (365)
T 3abi_A 76 KEFELVIGA--LPGFLGFKSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp TTCSEEEEC--CCGGGHHHHHHHHHHHTCEEEECC
T ss_pred hCCCEEEEe--cCCcccchHHHHHHhcCcceEeee
Confidence 345678765 567778889999999999999954
No 401
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=30.21 E-value=43 Score=22.20 Aligned_cols=34 Identities=15% Similarity=0.001 Sum_probs=29.6
Q ss_pred CCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEec
Q 025140 55 PGKGYVDVSTVDGDTSKLINGHIKATGASFLEAP 88 (257)
Q Consensus 55 ~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vdap 88 (257)
+.+++|-.+..+|+....+...++++++.|+..+
T Consensus 27 kaklViiA~D~~~~~~~~i~~lc~~~~Ip~~~v~ 60 (82)
T 3v7e_A 27 SVKEVVVAKDADPILTSSVVSLAEDQGISVSMVE 60 (82)
T ss_dssp CEEEEEEETTSCHHHHHHHHHHHHHHTCCEEEES
T ss_pred CeeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEC
Confidence 3468889999999999999999999999988766
No 402
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=30.09 E-value=1.5e+02 Score=21.11 Aligned_cols=61 Identities=10% Similarity=0.058 Sum_probs=35.8
Q ss_pred Hhc-CCEEEEecCCh--------HHHHHHhcCCCcccccCCCCCEEEEcCC------CCHHHHHHHHHHHHHcCCcEEE
Q 025140 23 AAS-CDVTFAMLADP--------ESAMDVACGKHGAASGMGPGKGYVDVST------VDGDTSKLINGHIKATGASFLE 86 (257)
Q Consensus 23 ~~~-advvi~~l~~~--------~~v~~v~~~~~~~~~~l~~g~~ivd~ST------~~p~~~~~la~~~~~~G~~~vd 86 (257)
+.+ +|.||+..|.. ..++..+ +.+.....+++.+.-.+| ..-...+.+.+.++..|...+.
T Consensus 45 l~~~~d~ii~~~p~y~~g~~~~p~~~~~fl---~~l~~~~l~~k~~~v~~~g~~~~~~~~~a~~~l~~~l~~~g~~~~~ 120 (147)
T 1f4p_A 45 LFEGFDLVLLGCSTWGDDSIELQDDFIPLF---DSLEETGAQGRKVACFGCGDSSWEYFCGAVDAIEEKLKNLGAEIVQ 120 (147)
T ss_dssp TTTTCSEEEEEECEECSSSCEECTTTHHHH---HTGGGSCCTTCEEEEEEEECTTSSSTTHHHHHHHHHHHHTTCEECS
T ss_pred hcCcCCEEEEEeCCCCCCCcCCChhHHHHH---HHHHhcccCCCEEEEEeecCCChHHHHHHHHHHHHHHHHcCCeEhh
Confidence 456 89999988765 1345554 222211224554433333 1346677888899888887654
No 403
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=30.07 E-value=1e+02 Score=27.71 Aligned_cols=64 Identities=6% Similarity=-0.063 Sum_probs=40.8
Q ss_pred ccccCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEE
Q 025140 13 CRYQPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLE 86 (257)
Q Consensus 13 a~~~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vd 86 (257)
...++++.|+++++|+|+++...++ .++. ..+.+.+.+ +.++|+|.-.+... +.+++.|..|.-
T Consensus 393 ~~~~~~~~~~~~~ad~~vi~t~~~~-f~~~--~~~~~~~~~-~~~~i~D~r~~~~~------~~~~~~g~~y~~ 456 (478)
T 2y0c_A 393 LSFVDDEAQAARDADALVIVTEWKI-FKSP--DFVALGRLW-KTPVIFDGRNLYEP------ETMSEQGIEYHP 456 (478)
T ss_dssp EEECSSHHHHTTTCSEEEECSCCGG-GGSC--CHHHHHTTC-SSCEEEESSCCSCH------HHHHHTTCEEEC
T ss_pred eeecCCHHHHHhCCCEEEEecCChH-hhcc--CHHHHHhhc-CCCEEEECCCCCCH------HHHHhcCCEEEE
Confidence 5667899999999999999998864 1110 001122222 45899999886642 234566777743
No 404
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=29.84 E-value=20 Score=31.53 Aligned_cols=19 Identities=0% Similarity=-0.088 Sum_probs=10.6
Q ss_pred CHHHHHhc--CCEEEEecCCh
Q 025140 18 SPDEVAAS--CDVTFAMLADP 36 (257)
Q Consensus 18 s~~ea~~~--advvi~~l~~~ 36 (257)
++.+++++ +|+||.|.+..
T Consensus 67 ~l~~~l~~~~~DvVin~ag~~ 87 (405)
T 4ina_A 67 ELVALINEVKPQIVLNIALPY 87 (405)
T ss_dssp HHHHHHHHHCCSEEEECSCGG
T ss_pred HHHHHHHhhCCCEEEECCCcc
Confidence 34455555 66666666543
No 405
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=29.62 E-value=1.4e+02 Score=25.79 Aligned_cols=75 Identities=11% Similarity=0.062 Sum_probs=46.3
Q ss_pred CCCCEEEEcC-CCCHHHHHHHHHHH--HHcCCcEEEecCCCCh-HH----hhcCceEEEecCChhHHHHHHHHHHHhcCC
Q 025140 54 GPGKGYVDVS-TVDGDTSKLINGHI--KATGASFLEAPVSGSK-KP----AEDGQLIFLAAGDKSLYNTVAPLLDIMGKS 125 (257)
Q Consensus 54 ~~g~~ivd~S-T~~p~~~~~la~~~--~~~G~~~vdapV~g~~-~~----a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~ 125 (257)
....+.||.. .-+++++.++.+.+ ++.++.|++-|+...- .. .+.-..+|..+-.-.....++++++.=+.+
T Consensus 187 ~~~~L~vDaN~~w~~~~A~~~~~~L~~~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~~a~d 266 (389)
T 3s5s_A 187 PGASLILDGNGGLTAGEALALVAHARRLGADVALLEQPVPRDDWDGMKEVTRRAGVDVAADESAASAEDVLRVAAERAAT 266 (389)
T ss_dssp TTCEEEEECTTCSCHHHHHHHHHHHHHTTCEEEEEECCSCTTCHHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHTTCCS
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhhCCCCeEEEECCCCcccHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCC
Confidence 3447899986 46789999999999 7778899999996432 11 112233555443333344566666544444
Q ss_pred cee
Q 025140 126 RFY 128 (257)
Q Consensus 126 ~~~ 128 (257)
++.
T Consensus 267 ~v~ 269 (389)
T 3s5s_A 267 VVN 269 (389)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 406
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=29.43 E-value=69 Score=27.55 Aligned_cols=72 Identities=18% Similarity=0.225 Sum_probs=48.2
Q ss_pred CCEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEecCCCChH-Hh----hcCceEEEecCChhHHHHHHHHHHHhcCCce
Q 025140 56 GKGYVDVS-TVDGDTSKLINGHIKATGASFLEAPVSGSKK-PA----EDGQLIFLAAGDKSLYNTVAPLLDIMGKSRF 127 (257)
Q Consensus 56 g~~ivd~S-T~~p~~~~~la~~~~~~G~~~vdapV~g~~~-~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~ 127 (257)
-.+.||.. .-+++++.++++.+++.|+.|++-|+...-. .. ..-..+++.+..-.....++++++.=+-+++
T Consensus 189 ~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP~~~~~~~~~~~l~~~~~iPia~dE~~~~~~~~~~~~~~~~~d~v 266 (370)
T 1chr_A 189 AYLRVDVNQAWDEQVASVYIPELEALGVELIEQPVGRENTQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVF 266 (370)
T ss_dssp CCEEEECTTCCCTTHHHHHTHHHHTTTEEEEECCSCTTCHHHHHHHHHHSCSEEEESSSCCSHHHHHHHHTTTSCSEE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCCCcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEE
Confidence 46889985 3567889999999999999999999864421 11 1224577777665555667777654333333
No 407
>3svl_A Protein YIEF; E. coli CHRR enzyme, chromate bioremediation, tetramer role, mutant enzymes, oxidoreductase; HET: FMN; 2.20A {Escherichia coli}
Probab=29.28 E-value=1.9e+02 Score=22.10 Aligned_cols=98 Identities=11% Similarity=0.083 Sum_probs=54.0
Q ss_pred HHHHHhcCCEEEEecCCh-----HHHHHHhcCCCccc---ccCCCCCEEEEcCC--C---CHHHHHHHHHHHHHcCCcEE
Q 025140 19 PDEVAASCDVTFAMLADP-----ESAMDVACGKHGAA---SGMGPGKGYVDVST--V---DGDTSKLINGHIKATGASFL 85 (257)
Q Consensus 19 ~~ea~~~advvi~~l~~~-----~~v~~v~~~~~~~~---~~l~~g~~ivd~ST--~---~p~~~~~la~~~~~~G~~~v 85 (257)
..+.+.++|.||+..|.+ ..++..+ +-+. .....||.+.-.+| . .......+...+...|+..+
T Consensus 66 l~~~i~~AD~iv~~sP~y~~~~~~~lK~~i---D~~~~~~~~~~~gK~~~~~~~s~g~~gg~~a~~~Lr~~l~~lg~~v~ 142 (193)
T 3svl_A 66 LAEQIRQADGVVIVTPEYNYSVPGGLKNAI---DWLSRLPDQPLAGKPVLIQTSSMGVIGGARCQYHLRQILVFLDAMVM 142 (193)
T ss_dssp HHHHHHHSSEEEEEECCBTTBCCHHHHHHH---HHHHTSTTCTTTTCEEEEEEECSSTTTTHHHHHHHHHHHHHTTCEEC
T ss_pred HHHHHHHCCEEEEEecccCCCCCHHHHHHH---HHHhhcCccccCCCeEEEEEeCCCCcchHHHHHHHHHHHHHCCCEEc
Confidence 457788999999999985 3455444 1111 12345665443332 2 12333456666666787777
Q ss_pred Eec-CC-CChHHh--hc-CceEEEecCChhHHHHHHHHHHHhcC
Q 025140 86 EAP-VS-GSKKPA--ED-GQLIFLAAGDKSLYNTVAPLLDIMGK 124 (257)
Q Consensus 86 dap-V~-g~~~~a--~~-g~l~i~~gg~~~~~~~~~~ll~~~~~ 124 (257)
-.| ++ +..... .. |++ -|++..++++.+++.+..
T Consensus 143 ~~~~~~~~~~~~~f~~~~g~l-----~d~~~~~~l~~~~~~~~~ 181 (193)
T 3svl_A 143 NKPEFMGGVIQNKVDPQTGEV-----IDQGTLDHLTGQLTAFGE 181 (193)
T ss_dssp CSSCEEETTGGGGEETTTTEE-----CCHHHHHHHHHHHHHHHH
T ss_pred CCCeEeecchhhhcCCCCCcC-----CCHHHHHHHHHHHHHHHH
Confidence 544 22 111122 12 443 277777888887776643
No 408
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=29.03 E-value=67 Score=26.65 Aligned_cols=53 Identities=11% Similarity=0.134 Sum_probs=31.6
Q ss_pred HHHHhcCCEEEEecCChH---------------HHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHH
Q 025140 20 DEVAASCDVTFAMLADPE---------------SAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHI 77 (257)
Q Consensus 20 ~ea~~~advvi~~l~~~~---------------~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~ 77 (257)
.++++++|+||++++.+. .+++++ +.+.+. .++.+||.. |.+.+....+.+..
T Consensus 70 ~~~~~~aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~---~~i~~~-~~~~~vi~~-~Np~~~~~~~~~~~ 137 (319)
T 1lld_A 70 PEICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIM---PNLVKV-APNAIYMLI-TNPVDIATHVAQKL 137 (319)
T ss_dssp GGGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHH---HHHHHH-CTTSEEEEC-CSSHHHHHHHHHHH
T ss_pred HHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH---HHHHHh-CCCceEEEe-cCchHHHHHHHHHh
Confidence 367889999999995431 223444 333332 456666654 56676665655543
No 409
>1rr7_A Middle operon regulator; MOR, transcription; 2.20A {Enterobacteria phage MU} SCOP: a.4.1.14
Probab=28.90 E-value=91 Score=22.63 Aligned_cols=61 Identities=10% Similarity=0.168 Sum_probs=41.5
Q ss_pred HHHHHHHHHhcCCceecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhh
Q 025140 113 NTVAPLLDIMGKSRFYLGDVGNGAAMKLVVNMIMGSMMATFSEGLLHSEKVGLDPNVLVEVVSQ 176 (257)
Q Consensus 113 ~~~~~ll~~~~~~~~~~G~~G~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gld~~~~~~~l~~ 176 (257)
+.+..+-+-+++..+|+ |-+.....+ ..|..+.--+.+. -.-.+|+++|++...+++++..
T Consensus 55 e~~~~L~~~~gG~~iYI-Pk~~~~~~~-~Rn~~I~~~f~G~-n~~eLArkYgLSer~I~~Ii~~ 115 (129)
T 1rr7_A 55 EIVVAICKHLGGGQVYI-PRGQALDSL-IRDLRIWNDFNGR-NVSELTTRYGVTFNTVYKAIRR 115 (129)
T ss_dssp HHHHHHHHHHCSSCCCC-CCSHHHHHH-HHHHHHHHHCCSS-CHHHHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHCCeeEEe-eCCchHHHH-HHHHHHHHHhCCC-CHHHHHHHHCCCHHHHHHHHHH
Confidence 66777778888888888 544444433 4444433333321 2458999999999999999976
No 410
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=28.66 E-value=1.6e+02 Score=25.23 Aligned_cols=73 Identities=8% Similarity=0.008 Sum_probs=48.9
Q ss_pred CCCEEEEcCC-CCHHHHHHHHHHHHHcCCcEEEecCCCChH-H----hhcCceEEEecCChhHHHHHHHHHHHhcCCce
Q 025140 55 PGKGYVDVST-VDGDTSKLINGHIKATGASFLEAPVSGSKK-P----AEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRF 127 (257)
Q Consensus 55 ~g~~ivd~ST-~~p~~~~~la~~~~~~G~~~vdapV~g~~~-~----a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~ 127 (257)
.-.+.||... -+++++.++.+.+++.++.|++-|+...-. . .+.-..+|..+-.-.....++++++.=+-.++
T Consensus 188 ~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i 266 (378)
T 4hpn_A 188 DMRLMIDANHGYTVTEAITLGDRAAGFGIDWFEEPVVPEQLDAYARVRAGQPIPVAGGETWHGRYGMWQALSAGAVDIL 266 (378)
T ss_dssp TSEEEEECTTCCCHHHHHHHHHHHGGGCCSCEECCSCTTCHHHHHHHHHHSSSCEEECTTCCHHHHHHHHHHTTCCSEE
T ss_pred cEEEEEecCcccCHHHHHHHHhhhhhcccchhhcCCCccchhhhHHHHhhCCceeeCCcCccchHhHHHHHHcCCCCEE
Confidence 3468899864 678999999999999999999999964321 1 12233466555444455667777765444443
No 411
>3dnf_A ISPH, LYTB, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; trilobal strucure, open alpha/beta, iron, iron-sulfur, isopr biosynthesis; 1.65A {Aquifex aeolicus}
Probab=28.61 E-value=22 Score=30.15 Aligned_cols=11 Identities=18% Similarity=0.567 Sum_probs=6.1
Q ss_pred HHHcCCcEEEe
Q 025140 77 IKATGASFLEA 87 (257)
Q Consensus 77 ~~~~G~~~vda 87 (257)
++++|..++|+
T Consensus 84 a~~rgl~iiDA 94 (297)
T 3dnf_A 84 LRKKGLKVIDA 94 (297)
T ss_dssp HHHTTCEEEEC
T ss_pred HHHCCCEEEeC
Confidence 44556666655
No 412
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=28.39 E-value=2.2e+02 Score=24.30 Aligned_cols=70 Identities=6% Similarity=-0.023 Sum_probs=47.2
Q ss_pred CCEEEEcCC-CCHHHHHHHHHHHHHcCCcEEEecCCCChHHh----hcCceEEEecCChhHHHHHHHHHHHhcCCcee
Q 025140 56 GKGYVDVST-VDGDTSKLINGHIKATGASFLEAPVSGSKKPA----EDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFY 128 (257)
Q Consensus 56 g~~ivd~ST-~~p~~~~~la~~~~~~G~~~vdapV~g~~~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~ 128 (257)
-.+.||... -+++++.++++.++ .|+ |++-|+. ..... +.-..+|+.++.-...+.++++++.=..+++.
T Consensus 191 ~~l~vDan~~~~~~~a~~~~~~l~-~~i-~iEqP~~-d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ 265 (378)
T 2qdd_A 191 HRVTFDVNRAWTPAIAVEVLNSVR-ARD-WIEQPCQ-TLDQCAHVARRVANPIMLDECLHEFSDHLAAWSRGACEGVK 265 (378)
T ss_dssp CEEEEECTTCCCHHHHHHHHTSCC-CCC-EEECCSS-SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEE
T ss_pred CEEEEeCCCCCCHHHHHHHHHHhC-CCc-EEEcCCC-CHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCEEE
Confidence 357888864 57899999999998 999 9999987 43332 12234666666554566777777655444443
No 413
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=28.33 E-value=92 Score=23.56 Aligned_cols=68 Identities=18% Similarity=0.071 Sum_probs=40.8
Q ss_pred HHHHhcCCEEEEecCCh-----HHHHHHhcCCCcccc----cCCCCCEEE---EcCCC--CH-HHHHHHHHHHHHcCCcE
Q 025140 20 DEVAASCDVTFAMLADP-----ESAMDVACGKHGAAS----GMGPGKGYV---DVSTV--DG-DTSKLINGHIKATGASF 84 (257)
Q Consensus 20 ~ea~~~advvi~~l~~~-----~~v~~v~~~~~~~~~----~l~~g~~iv---d~ST~--~p-~~~~~la~~~~~~G~~~ 84 (257)
.+-+.++|.||+..|.. ..++..+ +.+.. ...+|+.+. ...+. .. ...+.+...+...|..+
T Consensus 66 ~~~l~~aD~ii~gsP~y~~~~~~~lk~~l---d~~~~~~~~~~l~~K~~~~~~t~g~~~~~~~~~~~~l~~~l~~~g~~~ 142 (200)
T 2a5l_A 66 LEDLKNCAGLALGSPTRFGNMASPLKYFL---DGTSSLWLTGSLVGKPAAVFTSTASLHGGQETTQLSMLLPLLHHGMLV 142 (200)
T ss_dssp HHHHHTCSEEEEEEECBTTBCCHHHHHHH---HTCHHHHHHTTTTTCEEEEEEEBSCSSCCHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHCCEEEEEcChhccCccHHHHHHH---HHHHHHhhccccCCCEEEEEEecCCCCCCHHHHHHHHHHHHHHCCCEE
Confidence 46677899999998874 5667666 33221 112444332 22222 11 34556778888889998
Q ss_pred EEecCC
Q 025140 85 LEAPVS 90 (257)
Q Consensus 85 vdapV~ 90 (257)
+..++.
T Consensus 143 ~~~~~~ 148 (200)
T 2a5l_A 143 LGIPYS 148 (200)
T ss_dssp CCCCC-
T ss_pred ECCCCC
Confidence 877765
No 414
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=28.05 E-value=45 Score=24.88 Aligned_cols=85 Identities=8% Similarity=0.063 Sum_probs=49.5
Q ss_pred HhcCCEEEEecCChHH---HHHHhcCCCcccccCCCCCEEEEcCCC--CHHHHHHHHHHHHHcCCcEEEecCCCChHHhh
Q 025140 23 AASCDVTFAMLADPES---AMDVACGKHGAASGMGPGKGYVDVSTV--DGDTSKLINGHIKATGASFLEAPVSGSKKPAE 97 (257)
Q Consensus 23 ~~~advvi~~l~~~~~---v~~v~~~~~~~~~~l~~g~~ivd~ST~--~p~~~~~la~~~~~~G~~~vdapV~g~~~~a~ 97 (257)
+.++|.||+..|+... ....+ +.+.....+++.+.-.+|- +.+..+.+.+.+++.|...+..|+.
T Consensus 54 ~~~~d~ii~Gspty~g~~p~~~~l---~~l~~~~~~~k~va~fgs~g~~~~a~~~l~~~l~~~G~~~v~~~~~------- 123 (159)
T 3fni_A 54 VGRCTGLVIGMSPAASAASIQGAL---STILGSVNEKQAVGIFETGGGDDEPIDPLLSKFRNLGLTTAFPAIR------- 123 (159)
T ss_dssp HHTEEEEEEECCBTTSHHHHHHHH---HHHHHHCCTTSEEEEECCSSSCBCCHHHHHHHHHHTTCEESSSCBC-------
T ss_pred HHhCCEEEEEcCcCCCCccHHHHH---HHHHhhcccCCEEEEEEcCCCCcHHHHHHHHHHHHCCCEEecCceE-------
Confidence 3468999998887421 12333 2222223466665555442 3445778888998889888766542
Q ss_pred cCceEEEec-CChhHHHHHHHHHHHhc
Q 025140 98 DGQLIFLAA-GDKSLYNTVAPLLDIMG 123 (257)
Q Consensus 98 ~g~l~i~~g-g~~~~~~~~~~ll~~~~ 123 (257)
+-| -+++.+++++.+-+.+.
T Consensus 124 ------~~~~P~~~dl~~~~~~g~~la 144 (159)
T 3fni_A 124 ------IKQTPTENTYKLCEEAGTDLG 144 (159)
T ss_dssp ------CSSCCCHHHHHHHHHHHHHHH
T ss_pred ------EEeCCCHHHHHHHHHHHHHHH
Confidence 112 24566777776655553
No 415
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=27.90 E-value=2.7e+02 Score=23.97 Aligned_cols=77 Identities=12% Similarity=-0.011 Sum_probs=48.6
Q ss_pred ccccCCC-CCEEEEcC-CCCHHHHHHHHHHH-HHcCCcEEEecCCCChHHh----hcCceEEEecCChhHHHHHHHHHHH
Q 025140 49 AASGMGP-GKGYVDVS-TVDGDTSKLINGHI-KATGASFLEAPVSGSKKPA----EDGQLIFLAAGDKSLYNTVAPLLDI 121 (257)
Q Consensus 49 ~~~~l~~-g~~ivd~S-T~~p~~~~~la~~~-~~~G~~~vdapV~g~~~~a----~~g~l~i~~gg~~~~~~~~~~ll~~ 121 (257)
+.+...+ -.+.||.. .-+++++.++++.+ +..++ |++-|+. ..... ..-..+|..+..-.....++++++.
T Consensus 187 vR~a~G~~~~L~vDaN~~~~~~~A~~~~~~l~~~~~i-~iEeP~~-~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~ 264 (386)
T 3fv9_G 187 CLADRQPGEWYLADANNGLTVEHALRMLSLLPPGLDI-VLEAPCA-SWAETKSLRARCALPLLLDELIQTETDLIAAIRD 264 (386)
T ss_dssp HTTTCCTTCEEEEECTTCCCHHHHHHHHHHSCSSCCC-EEECCCS-SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHT
T ss_pred HHHHcCCCCeEEEECCCCCCHHHHHHHHHHhhccCCc-EEecCCC-CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHh
Confidence 3344433 36889986 46789999999999 77888 9999997 33222 1223456665554445567777764
Q ss_pred hcCCce
Q 025140 122 MGKSRF 127 (257)
Q Consensus 122 ~~~~~~ 127 (257)
=+-+++
T Consensus 265 ~a~d~v 270 (386)
T 3fv9_G 265 DLCDGV 270 (386)
T ss_dssp TCCSEE
T ss_pred CCCCEE
Confidence 444433
No 416
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=27.86 E-value=51 Score=29.50 Aligned_cols=21 Identities=5% Similarity=-0.061 Sum_probs=18.5
Q ss_pred cCCHHHHHhcCCEEEEecCCh
Q 025140 16 QPSPDEVAASCDVTFAMLADP 36 (257)
Q Consensus 16 ~~s~~ea~~~advvi~~l~~~ 36 (257)
..+..+++++||+||++.+.+
T Consensus 74 t~D~~eal~gAD~VVitagv~ 94 (450)
T 1s6y_A 74 TLDRRRALDGADFVTTQFRVG 94 (450)
T ss_dssp ESCHHHHHTTCSEEEECCCTT
T ss_pred eCCHHHHhCCCCEEEEcCCCC
Confidence 468889999999999999964
No 417
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=27.82 E-value=42 Score=24.72 Aligned_cols=61 Identities=18% Similarity=0.118 Sum_probs=37.2
Q ss_pred hcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEecCC
Q 025140 24 ASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVS 90 (257)
Q Consensus 24 ~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vdapV~ 90 (257)
...|+|++.-+-.. ..++ +.+...+.+|..++ .++..++....+.+.++++|..+....+.
T Consensus 93 ~~~D~i~~~~~~~~--~~~l---~~~~~~L~~gG~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (178)
T 3hm2_A 93 DNPDVIFIGGGLTA--PGVF---AAAWKRLPVGGRLV-ANAVTVESEQMLWALRKQFGGTISSFAIS 153 (178)
T ss_dssp SCCSEEEECC-TTC--TTHH---HHHHHTCCTTCEEE-EEECSHHHHHHHHHHHHHHCCEEEEEEEE
T ss_pred CCCCEEEECCcccH--HHHH---HHHHHhcCCCCEEE-EEeeccccHHHHHHHHHHcCCeeEEEEee
Confidence 35799987654433 2222 23344566666655 44556677778888888888776655443
No 418
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=27.69 E-value=1.3e+02 Score=22.92 Aligned_cols=98 Identities=7% Similarity=-0.006 Sum_probs=49.9
Q ss_pred HHHHHhcCCEEEEecCCh-----HHHHHHh---cCC------CcccccCCCCCEEEEc-CCCCHH---HHHHHHHHHHHc
Q 025140 19 PDEVAASCDVTFAMLADP-----ESAMDVA---CGK------HGAASGMGPGKGYVDV-STVDGD---TSKLINGHIKAT 80 (257)
Q Consensus 19 ~~ea~~~advvi~~l~~~-----~~v~~v~---~~~------~~~~~~l~~g~~ivd~-ST~~p~---~~~~la~~~~~~ 80 (257)
..+.+.++|.||+..|.. ..++..+ ... .+ ....+||.++-. ++.... ....+...+...
T Consensus 61 ~~~~i~~AD~iV~~sP~y~~~~p~~lK~~iD~~~~~~~~~~~~g--~~~l~gK~~~i~~t~gg~g~~~~~~~l~~~l~~~ 138 (192)
T 3fvw_A 61 AREEVQEADAIWIFSPVYNYAIPGPVKNLLDWLSRSLDLSDPTG--PSVLQDKIVTVSSVANGASPEEVFEDYRSLLPFI 138 (192)
T ss_dssp HHHHHHHCSEEEEECCCBTTBCCHHHHHHHHHHTSCSCSSCTTS--CCTTTTCEEEEEEESCCC---CCSHHHHHHHHHT
T ss_pred HHHHHHhCCEEEEECcccccCCCHHHHHHHHHhhccccccCCCC--CccCCCCEEEEEEeCCCcchhHHHHHHHHHHHHc
Confidence 456778899999999974 3444443 110 01 112356544333 222212 223455666677
Q ss_pred CCcEEEecCCCC--hHHhhcCceEEEecCChhHHHHHHHHHHHh
Q 025140 81 GASFLEAPVSGS--KKPAEDGQLIFLAAGDKSLYNTVAPLLDIM 122 (257)
Q Consensus 81 G~~~vdapV~g~--~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~ 122 (257)
|...++..+... +..-.+|++. -+++..++++.+++.+
T Consensus 139 G~~~v~~~v~~~~~~~~f~~g~~~----~~~~~~~~l~~~~~~l 178 (192)
T 3fvw_A 139 RMHLVDQLTGVPINSEAWSTGILK----VSAEKLAELSAQADAL 178 (192)
T ss_dssp TCEECCCCEEECCCTTHHHHCCCC----CCHHHHHHHHHHHHHH
T ss_pred CCeeecceeecccchhhccCCccc----cCHHHHHHHHHHHHHH
Confidence 887776544333 2222355532 2455555665555444
No 419
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=27.53 E-value=2.4e+02 Score=22.66 Aligned_cols=71 Identities=11% Similarity=0.061 Sum_probs=45.5
Q ss_pred CCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEecCCCChHHhhcCceEEEecCChhHHHHHHHHHHHhcC
Q 025140 53 MGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGK 124 (257)
Q Consensus 53 l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vdapV~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~~ 124 (257)
+-+||+++-+...+ .-.+.+++.+.+.|.+.+=............+.-...+-+|-...+.++.+++.+++
T Consensus 8 lf~GK~alVTGas~-GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~ 78 (242)
T 4b79_A 8 IYAGQQVLVTGGSS-GIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPR 78 (242)
T ss_dssp TTTTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCSC
T ss_pred CCCCCEEEEeCCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcCC
Confidence 34688777665443 677899999999999876444432222222233344555666556778888999976
No 420
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=27.39 E-value=1.2e+02 Score=22.35 Aligned_cols=90 Identities=9% Similarity=0.068 Sum_probs=51.4
Q ss_pred CHHHHH---hcCCEEEEecCChHH---HHHHhcCCCcccccCCCCCEEEEcCC--CCHHHHHHHHHHHHHcCCcEEEecC
Q 025140 18 SPDEVA---ASCDVTFAMLADPES---AMDVACGKHGAASGMGPGKGYVDVST--VDGDTSKLINGHIKATGASFLEAPV 89 (257)
Q Consensus 18 s~~ea~---~~advvi~~l~~~~~---v~~v~~~~~~~~~~l~~g~~ivd~ST--~~p~~~~~la~~~~~~G~~~vdapV 89 (257)
++.+.. .++|.||+..|+... ....+ +.+.....+|+.+.-.+| .+.+..+.+.+.+++.|...+..|+
T Consensus 41 ~~~~~~~~~~~~d~ii~Gspty~g~~p~~~fl---~~l~~~~l~gk~v~~fgs~g~~g~a~~~l~~~l~~~G~~~v~~~~ 117 (161)
T 3hly_A 41 DPQELIEAVSSARGIVLGTPPSQPSEAVATAL---STIFAAAHNKQAIGLFDSYGGDDEPIDALLAQFRNLGLHTAFPPI 117 (161)
T ss_dssp CHHHHHHHHHHCSEEEEECCBSSCCHHHHHHH---HHHHHHCCTTSEEEEECCCCSSBCCHHHHHHHHHHTTCEESSSCB
T ss_pred CHHHHHHHHHhCCEEEEEcCCcCCchhHHHHH---HHHHhhhhCCCEEEEEEcCCCCcHHHHHHHHHHHHCCCEEecCce
Confidence 445543 479999999887421 12333 222222235555444433 2346778899999999988875543
Q ss_pred CCChHHhhcCceEEEec-CChhHHHHHHHHHHHhc
Q 025140 90 SGSKKPAEDGQLIFLAA-GDKSLYNTVAPLLDIMG 123 (257)
Q Consensus 90 ~g~~~~a~~g~l~i~~g-g~~~~~~~~~~ll~~~~ 123 (257)
.. -+ -+++.+++++.+-+.+.
T Consensus 118 ~~-------------~~~P~~~dl~~~~~~g~~la 139 (161)
T 3hly_A 118 RV-------------KDQPTEAIYQQCEESGTDLG 139 (161)
T ss_dssp CC-------------CSSCCHHHHHHHHHHHHHHH
T ss_pred EE-------------eeCCCHHHHHHHHHHHHHHH
Confidence 21 12 25566777776655553
No 421
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=26.94 E-value=82 Score=26.57 Aligned_cols=23 Identities=9% Similarity=0.118 Sum_probs=17.2
Q ss_pred cccCCHHHHHhcCCEEEEecCCh
Q 025140 14 RYQPSPDEVAASCDVTFAMLADP 36 (257)
Q Consensus 14 ~~~~s~~ea~~~advvi~~l~~~ 36 (257)
++..+..+++++||+||++.+.+
T Consensus 61 ~v~~~~~~a~~~aDvVii~ag~~ 83 (318)
T 1ez4_A 61 KIYSGEYSDCKDADLVVITAGAP 83 (318)
T ss_dssp EEEECCGGGGTTCSEEEECCCC-
T ss_pred EEEECCHHHhCCCCEEEECCCCC
Confidence 34345678899999999998665
No 422
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=26.77 E-value=63 Score=28.01 Aligned_cols=67 Identities=15% Similarity=0.091 Sum_probs=45.5
Q ss_pred CCEEEEcCC-CCHHHHHHHHHHHHHcCCcEEEecCCCCh-HHh----hcCceEEEecCChhHHHHHHHHHHHh
Q 025140 56 GKGYVDVST-VDGDTSKLINGHIKATGASFLEAPVSGSK-KPA----EDGQLIFLAAGDKSLYNTVAPLLDIM 122 (257)
Q Consensus 56 g~~ivd~ST-~~p~~~~~la~~~~~~G~~~vdapV~g~~-~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~ 122 (257)
-.+.||... -+++++.++++.+++.|+.|++-|+.-.- ... +.-..+|+.++.-...+.++++++.=
T Consensus 200 ~~l~vD~n~~~~~~~a~~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~ 272 (392)
T 2poz_A 200 IELMVDLSGGLTTDETIRFCRKIGELDICFVEEPCDPFDNGALKVISEQIPLPIAVGERVYTRFGFRKIFELQ 272 (392)
T ss_dssp SEEEEECTTCSCHHHHHHHHHHHGGGCEEEEECCSCTTCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHTTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCCCcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcC
Confidence 457889863 57899999999999999999999985321 111 12234666665555566777777543
No 423
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=26.31 E-value=2.1e+02 Score=25.29 Aligned_cols=72 Identities=10% Similarity=-0.024 Sum_probs=48.0
Q ss_pred CCEEEEcCC-CCHHHHHHHHHHHHHcCCcEEEecCCCChH----Hhhc----CceEEEecCChhHHHHHHHHHHHhcCCc
Q 025140 56 GKGYVDVST-VDGDTSKLINGHIKATGASFLEAPVSGSKK----PAED----GQLIFLAAGDKSLYNTVAPLLDIMGKSR 126 (257)
Q Consensus 56 g~~ivd~ST-~~p~~~~~la~~~~~~G~~~vdapV~g~~~----~a~~----g~l~i~~gg~~~~~~~~~~ll~~~~~~~ 126 (257)
-.+.||... -+++++.++.+.+++.++.|++-|+...-. ...+ -..+|..|-.-.....++++++.=+-.+
T Consensus 246 ~~l~vDaN~~~~~~~A~~~~~~L~~~~~~~iEeP~~~~d~~~~~~l~~~l~~~~iPIa~gE~~~~~~~~~~~l~~~a~di 325 (441)
T 4a35_A 246 KTLMMDANQRWDVPEAVEWMSKLAKFKPLWIEEPTSPDDILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQAKALQF 325 (441)
T ss_dssp SEEEEECTTCCCHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHHHGGGTCEEEECTTCCSHHHHHHHHHTTCCSE
T ss_pred CeEEEECCCCCCHHHHHHHHHhhcccCccEEeCCCCcccHHHHHHHHHhccCCCCCEEeCCccccHHHHHHHHHcCCCCE
Confidence 368899864 678999999999999999999999874211 1111 2356666544444556777776544444
Q ss_pred e
Q 025140 127 F 127 (257)
Q Consensus 127 ~ 127 (257)
+
T Consensus 326 v 326 (441)
T 4a35_A 326 L 326 (441)
T ss_dssp E
T ss_pred E
Confidence 3
No 424
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=26.23 E-value=1.3e+02 Score=26.00 Aligned_cols=81 Identities=7% Similarity=0.082 Sum_probs=54.4
Q ss_pred ccCCCCCEEEEcCCCCH------HHHHHHHHHHHHcCCcEEEecCCCChHHhhcCceEEEecCChhHHHHHHHHHHHhcC
Q 025140 51 SGMGPGKGYVDVSTVDG------DTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGK 124 (257)
Q Consensus 51 ~~l~~g~~ivd~ST~~p------~~~~~la~~~~~~G~~~vdapV~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~~ 124 (257)
+.|.+|.+|--.|..+| +......+++++.|.+.+-.|-..... + +.+|+.+ +|++++.+++..
T Consensus 38 ~~Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~----~----~~agtd~--~Ra~dL~~af~D 107 (371)
T 3tla_A 38 APLAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTD----F----YRSGTIK--ERAQEFNELVYN 107 (371)
T ss_dssp CCCCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECTTTTCCB----T----TBSSCHH--HHHHHHHHHHTC
T ss_pred CCCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhccc----C----ccCCCHH--HHHHHHHHHhhC
Confidence 45778988766655543 334455668888999988777543321 2 3567776 789999999875
Q ss_pred C---ceec--CCCchHHHHHHH
Q 025140 125 S---RFYL--GDVGNGAAMKLV 141 (257)
Q Consensus 125 ~---~~~~--G~~G~a~~~Kl~ 141 (257)
. .+.+ |+.|+...+.++
T Consensus 108 p~i~aI~~~rGGyga~rlLp~L 129 (371)
T 3tla_A 108 PDITCIMSTIGGDNSNSLLPFL 129 (371)
T ss_dssp TTEEEEEESCCCSCGGGGGGGS
T ss_pred CCCCEEEEccccccHHHHHhhc
Confidence 3 2332 778988888776
No 425
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=26.02 E-value=71 Score=24.50 Aligned_cols=96 Identities=7% Similarity=-0.050 Sum_probs=53.0
Q ss_pred HHHhcCCEEEEecCCh-----HHHHHHhcCCCcccccCCCCCEEEEcCC-CCHHH---H-HHHHHHHHHcCCcEEEecCC
Q 025140 21 EVAASCDVTFAMLADP-----ESAMDVACGKHGAASGMGPGKGYVDVST-VDGDT---S-KLINGHIKATGASFLEAPVS 90 (257)
Q Consensus 21 ea~~~advvi~~l~~~-----~~v~~v~~~~~~~~~~l~~g~~ivd~ST-~~p~~---~-~~la~~~~~~G~~~vdapV~ 90 (257)
+.+.++|.||+..|.. ..++..+ +-+.....+|+.++-.+| ..+.. . ..+...+...|...+..++.
T Consensus 65 ~~i~~aD~ii~~sP~y~~~~p~~lK~~l---d~l~~~~~~gK~~~~~~tgg~~~~~~a~~~~l~~~l~~~g~~~v~~~v~ 141 (197)
T 2vzf_A 65 DATCNADGLIVATPIYKASYTGLLKAFL---DILPQFALAGKAALPLATGGSPAHVLALDYGLRPVLHSMGVRHVVQSFF 141 (197)
T ss_dssp HHHHHCSEEEEEEECBTTBCCHHHHHHH---TTSCTTTTTTCEEEEEEEESSGGGGGHHHHTHHHHHHTTTCSEECCCEE
T ss_pred HHHHHCCEEEEEeCccCCCCCHHHHHHH---HhccccccCCCEEEEEEECCCcchhhHHHHHHHHHHHHcCCEeccceEE
Confidence 4577899999999884 4677776 333322335554443333 33332 2 24667777788888765443
Q ss_pred CChHHh---hcCceEEEecCChhHHHHHHHHHHHhcC
Q 025140 91 GSKKPA---EDGQLIFLAAGDKSLYNTVAPLLDIMGK 124 (257)
Q Consensus 91 g~~~~a---~~g~l~i~~gg~~~~~~~~~~ll~~~~~ 124 (257)
-..... ..|. --+++..++++.+.+.+..
T Consensus 142 ~~~~~~~~~~~g~-----~~d~~~~~~l~~~~~~l~~ 173 (197)
T 2vzf_A 142 LVQSQFSVVDGKL-----AVEDDVASQLNNAIDHFRL 173 (197)
T ss_dssp EESCCC-----CC-----CSCHHHHHHHHHHHHHHHH
T ss_pred EechhhcccCCCC-----cCCHHHHHHHHHHHHHHHH
Confidence 221110 0111 0245667777777766643
No 426
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=25.93 E-value=1.9e+02 Score=24.76 Aligned_cols=43 Identities=14% Similarity=0.037 Sum_probs=30.3
Q ss_pred CcccccCCCC-CEEEEcCC--------CCHHHHHHHHHHHHHcCCcEEEecC
Q 025140 47 HGAASGMGPG-KGYVDVST--------VDGDTSKLINGHIKATGASFLEAPV 89 (257)
Q Consensus 47 ~~~~~~l~~g-~~ivd~ST--------~~p~~~~~la~~~~~~G~~~vdapV 89 (257)
+.+.+...+. .+.|-+|. .++++..++++.+++.|+.||+...
T Consensus 216 ~aVr~avg~d~pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~ 267 (363)
T 3l5l_A 216 AAVREVWPENLPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSV 267 (363)
T ss_dssp HHHHTTSCTTSCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHcCCCceEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 3444444444 36666663 4577888999999999999999765
No 427
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=25.89 E-value=95 Score=22.45 Aligned_cols=18 Identities=11% Similarity=0.283 Sum_probs=12.7
Q ss_pred HhcCCEEEEecCChHHHH
Q 025140 23 AASCDVTFAMLADPESAM 40 (257)
Q Consensus 23 ~~~advvi~~l~~~~~v~ 40 (257)
++++|+||+++++++.-.
T Consensus 69 i~~ad~vi~~~~~d~~n~ 86 (153)
T 1id1_A 69 IDRCRAILALSDNDADNA 86 (153)
T ss_dssp TTTCSEEEECSSCHHHHH
T ss_pred hhhCCEEEEecCChHHHH
Confidence 567888888888765433
No 428
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=25.88 E-value=1.5e+02 Score=24.00 Aligned_cols=61 Identities=13% Similarity=0.133 Sum_probs=34.6
Q ss_pred CCHHHHHh-cCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCC-CCHHHHHHHHHHHHHc-CCcE
Q 025140 17 PSPDEVAA-SCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVST-VDGDTSKLINGHIKAT-GASF 84 (257)
Q Consensus 17 ~s~~ea~~-~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST-~~p~~~~~la~~~~~~-G~~~ 84 (257)
+++.+++. ++|+||=+. +++++.+.+ ... +..|.-+|-.|| .+++...++.+.+++. +...
T Consensus 36 ~dl~~~~~~~~DvvIDfT-~p~a~~~~~---~~a---~~~g~~~VigTTG~~~e~~~~l~~aa~~~~~~~v 99 (245)
T 1p9l_A 36 DPLSLLTDGNTEVVIDFT-HPDVVMGNL---EFL---IDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSV 99 (245)
T ss_dssp CCTHHHHHTTCCEEEECS-CTTTHHHHH---HHH---HHTTCEEEECCCCCCHHHHHHHHHHHHTSTTCEE
T ss_pred CCHHHHhccCCcEEEEcc-ChHHHHHHH---HHH---HHcCCCEEEcCCCCCHHHHHHHHHHHHhCCCCCE
Confidence 56777775 799887555 445555554 222 234555555555 5666666666666543 5443
No 429
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=25.54 E-value=51 Score=28.30 Aligned_cols=18 Identities=17% Similarity=0.272 Sum_probs=10.7
Q ss_pred HHHHHhcCCEEEEecCCh
Q 025140 19 PDEVAASCDVTFAMLADP 36 (257)
Q Consensus 19 ~~ea~~~advvi~~l~~~ 36 (257)
..+.++++|+||.|++.+
T Consensus 224 ~~~~~~~~DvVI~~~~~~ 241 (361)
T 1pjc_A 224 IETAVAEADLLIGAVLVP 241 (361)
T ss_dssp HHHHHHTCSEEEECCCCT
T ss_pred HHHHHcCCCEEEECCCcC
Confidence 345555677777666543
No 430
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=25.49 E-value=2.1e+02 Score=23.08 Aligned_cols=64 Identities=5% Similarity=-0.158 Sum_probs=35.8
Q ss_pred HHHHHhcCCEEEEecCCh-----HHHHHHhcCCCcccc-----cCCCCCEEEEcCC-CCH---HHHHHHHHHHHHcCCcE
Q 025140 19 PDEVAASCDVTFAMLADP-----ESAMDVACGKHGAAS-----GMGPGKGYVDVST-VDG---DTSKLINGHIKATGASF 84 (257)
Q Consensus 19 ~~ea~~~advvi~~l~~~-----~~v~~v~~~~~~~~~-----~l~~g~~ivd~ST-~~p---~~~~~la~~~~~~G~~~ 84 (257)
..+.+.+||.||+..|.+ ..++..+. -+.. ...+||.+.-.+| ..+ .....+...+...|+.+
T Consensus 92 l~~~i~~AD~iI~~sP~Yn~sipa~LKn~iD---~l~~~~~~~~~l~gK~v~~v~tsG~~gg~~a~~~Lr~~l~~lg~~~ 168 (247)
T 2q62_A 92 LRELSIWSEGQVWVSPERHGAMTGIMKAQID---WIPLSTGSIRPTQGKTLAVMQVSGGSQSFNAVNQMRILGRWMRMIT 168 (247)
T ss_dssp HHHHHHHCSEEEEEEECSSSSCCHHHHHHHH---TSCSCBTTBCSSTTCEEEEEEECSSSCCCHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHCCEEEEEeCCCCCCccHHHHHHHH---HhhhccCcccccCCCEEEEEEeCCCccHHHHHHHHHHHHHHCCCEE
Confidence 456778899999999884 56666662 2211 1235554433332 222 23445556666667665
Q ss_pred E
Q 025140 85 L 85 (257)
Q Consensus 85 v 85 (257)
+
T Consensus 169 v 169 (247)
T 2q62_A 169 I 169 (247)
T ss_dssp C
T ss_pred e
Confidence 4
No 431
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=25.35 E-value=2.9e+02 Score=23.96 Aligned_cols=71 Identities=13% Similarity=0.056 Sum_probs=46.0
Q ss_pred CCEEEEcCC-CCHHHHHHHHHHHHHcCCcEEEecCCCChH-H----hhcCceEEEecCChhHHHHHHHHHHHhcCCc
Q 025140 56 GKGYVDVST-VDGDTSKLINGHIKATGASFLEAPVSGSKK-P----AEDGQLIFLAAGDKSLYNTVAPLLDIMGKSR 126 (257)
Q Consensus 56 g~~ivd~ST-~~p~~~~~la~~~~~~G~~~vdapV~g~~~-~----a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~ 126 (257)
-.+.||... -+++++.++.+.+++.|+.|++-|+.-.-. . .+.-..+|..|-.-.....++++++.=+-.+
T Consensus 233 ~~l~vDaN~~~~~~~A~~~~~~l~~~~l~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~di 309 (412)
T 4h1z_A 233 VRIACDMHWAHTASEAVALIKAMEPHGLWFAEAPVRTEDIDGLARVAASVSTAIAVGEEWRTVHDMVPRVARRALAI 309 (412)
T ss_dssp SEEEEECCSCCCHHHHHHHHHHHGGGCEEEEECCSCTTCHHHHHHHHHHCSSEEEECTTCCSHHHHHHHHHTTCCSE
T ss_pred EEEEeccccCCCHHHHHHHHHhhcccccceecCCCCccchHHHHHHHhhcCCccccCCcccchHhHHHHHHcCCCCE
Confidence 368899864 688999999999999999999999864321 1 1222345555444344455666665433333
No 432
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=25.25 E-value=99 Score=26.50 Aligned_cols=24 Identities=8% Similarity=0.117 Sum_probs=18.2
Q ss_pred ccccCCHHHHHhcCCEEEEecCCh
Q 025140 13 CRYQPSPDEVAASCDVTFAMLADP 36 (257)
Q Consensus 13 a~~~~s~~ea~~~advvi~~l~~~ 36 (257)
.+...+..+++++||+||++...+
T Consensus 64 i~~t~d~~~al~dADvVvitaG~p 87 (343)
T 3fi9_A 64 LTFTSDIKEALTDAKYIVSSGGAP 87 (343)
T ss_dssp CEEESCHHHHHTTEEEEEECCC--
T ss_pred eEEcCCHHHHhCCCCEEEEccCCC
Confidence 344578889999999999997654
No 433
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=25.13 E-value=38 Score=28.54 Aligned_cols=24 Identities=13% Similarity=-0.075 Sum_probs=20.5
Q ss_pred hhhcCccccCCHHHHHhcCCEEEE
Q 025140 8 FYYSRCRYQPSPDEVAASCDVTFA 31 (257)
Q Consensus 8 ~~~~Ga~~~~s~~ea~~~advvi~ 31 (257)
+.+.|.+...++.|+++++|+|.+
T Consensus 188 ~~~~g~~~~~d~~eav~~aDvvy~ 211 (291)
T 3d6n_B 188 VEVFKVDVFDDVDKGIDWADVVIW 211 (291)
T ss_dssp GGGGCEEEESSHHHHHHHCSEEEE
T ss_pred HHHCCCEEEcCHHHHhCCCCEEEE
Confidence 334578889999999999999998
No 434
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=25.09 E-value=60 Score=22.78 Aligned_cols=14 Identities=0% Similarity=0.069 Sum_probs=10.2
Q ss_pred HhcCCEEEEecCCh
Q 025140 23 AASCDVTFAMLADP 36 (257)
Q Consensus 23 ~~~advvi~~l~~~ 36 (257)
+.++|+||.|++++
T Consensus 68 ~~~~d~vi~~~~~~ 81 (144)
T 2hmt_A 68 IRNFEYVIVAIGAN 81 (144)
T ss_dssp GGGCSEEEECCCSC
T ss_pred CCCCCEEEECCCCc
Confidence 45678888888765
No 435
>1czn_A Flavodoxin; FMN binding, redox potential, electron transport; HET: FMN; 1.70A {Synechococcus elongatus} SCOP: c.23.5.1 PDB: 1czl_A* 1czu_A* 1d04_A* 1ofv_A* 1czr_A* 1czk_A* 1czo_A* 1czh_A* 1d03_A*
Probab=24.90 E-value=1.6e+02 Score=21.54 Aligned_cols=63 Identities=11% Similarity=-0.046 Sum_probs=39.1
Q ss_pred HHhcCCEEEEecCChH------HHHHHhcCCCcccccCCCCCEEEEcCCC--------CHHHHHHHHHHHHHcCCcEEEe
Q 025140 22 VAASCDVTFAMLADPE------SAMDVACGKHGAASGMGPGKGYVDVSTV--------DGDTSKLINGHIKATGASFLEA 87 (257)
Q Consensus 22 a~~~advvi~~l~~~~------~v~~v~~~~~~~~~~l~~g~~ivd~ST~--------~p~~~~~la~~~~~~G~~~vda 87 (257)
-+.+.|.||+..|... .+++.+ +.+.....+|+.+.-.+|. .-...+.+.+.+.+.|...+..
T Consensus 43 ~l~~~d~ii~g~pty~~g~~p~~~~~f~---~~l~~~~l~gk~~~~f~t~~~~~~~~~~~~a~~~l~~~l~~~g~~~~~~ 119 (169)
T 1czn_A 43 DLNAYDYLIIGCPTWNVGELQSDWEGIY---DDLDSVNFQGKKVAYFGAGDQVGYSDNFQDAMGILEEKISSLGSQTVGY 119 (169)
T ss_dssp GGGGCSEEEEECCEETTTEECHHHHHHG---GGGGGSCCTTCEEEEEEECCTTTTTTSTTHHHHHHHHHHHHTTCEECCC
T ss_pred HHhhCCEEEEEecccCCCcCCHHHHHHH---HHhhhhccCCCEEEEEEECCCchhhHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 4567999999998842 355555 2222222345554443331 2356778888998899887653
No 436
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=24.65 E-value=13 Score=32.94 Aligned_cols=51 Identities=10% Similarity=-0.007 Sum_probs=36.0
Q ss_pred cCCHHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHH
Q 025140 16 QPSPDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLI 73 (257)
Q Consensus 16 ~~s~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~l 73 (257)
..++.|+++++|++|=+.. +..+. +++++.+.++.+|+++|+-+|+..-+.
T Consensus 249 ~~~L~eav~~ADV~IG~Sa-pgl~T------~EmVk~Ma~~pIIfalsNPt~E~~pe~ 299 (398)
T 2a9f_A 249 SGTLEDALEGADIFIGVSA-PGVLK------AEWISKMAARPVIFAMANPIPEIYPDE 299 (398)
T ss_dssp CCSCSHHHHTTCSEEECCS-TTCCC------HHHHHTSCSSCEEEECCSSSCSSCHHH
T ss_pred hhhHHHHhccCCEEEecCC-CCCCC------HHHHHhhCCCCEEEECCCCCccCCHHH
Confidence 5679999999999876643 43221 345566789999999998777554433
No 437
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=24.62 E-value=63 Score=28.55 Aligned_cols=66 Identities=14% Similarity=0.086 Sum_probs=44.3
Q ss_pred CCEEEEcCC-CCHHHHHHHHHHHHHcCCcEEEecCCCCh-HHh---h-cCc-eEEEecCChhHHHHHHHHHHH
Q 025140 56 GKGYVDVST-VDGDTSKLINGHIKATGASFLEAPVSGSK-KPA---E-DGQ-LIFLAAGDKSLYNTVAPLLDI 121 (257)
Q Consensus 56 g~~ivd~ST-~~p~~~~~la~~~~~~G~~~vdapV~g~~-~~a---~-~g~-l~i~~gg~~~~~~~~~~ll~~ 121 (257)
-.+.||... -+++++.++.+.+++.|+.|++-|+...- ... . .-. .+|+.++.-...+.++.+++.
T Consensus 230 ~~l~vDan~~~~~~eai~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~ 302 (428)
T 3bjs_A 230 VDILTDANTAYTMADARRVLPVLAEIQAGWLEEPFACNDFASYREVAKITPLVPIAAGENHYTRFEFGQMLDA 302 (428)
T ss_dssp SEEEEECTTCCCHHHHHHHHHHHHHTTCSCEECCSCTTCHHHHHHHTTTCSSSCEEECTTCCSHHHHHHHHTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCCCccCHHHHHHHHHhCCCCcEEcCCCcCCHHHHHHHHHh
Confidence 457888863 57899999999999999999999985321 111 1 112 566666554445666776643
No 438
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=24.49 E-value=1.8e+02 Score=24.75 Aligned_cols=81 Identities=12% Similarity=0.155 Sum_probs=53.1
Q ss_pred ccCCCCCEEEEcCCCCH------HHHHHHHHHHHHcCCcEEEecCCCChHHhhcCceEEEecCChhHHHHHHHHHHHhcC
Q 025140 51 SGMGPGKGYVDVSTVDG------DTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMGK 124 (257)
Q Consensus 51 ~~l~~g~~ivd~ST~~p------~~~~~la~~~~~~G~~~vdapV~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~~ 124 (257)
+.|.+|.+|--.|..+| +..+...+++++.|.+.+-.|-.... .+ +.+|+.+ +|++++.+++..
T Consensus 8 ~~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~----~~----~~ag~d~--~Ra~dL~~a~~D 77 (336)
T 3sr3_A 8 KSLKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRY----DY----YRSGSIQ--ERAKELNALIRN 77 (336)
T ss_dssp CCCCTTCEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEECTTTTCC----BT----TBSSCHH--HHHHHHHHHHHC
T ss_pred CCCCCCCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEccccccc----cc----ccCCCHH--HHHHHHHHHhhC
Confidence 35778887766655443 33445566888899988766544332 11 4567776 789999888865
Q ss_pred C---ceec--CCCchHHHHHHH
Q 025140 125 S---RFYL--GDVGNGAAMKLV 141 (257)
Q Consensus 125 ~---~~~~--G~~G~a~~~Kl~ 141 (257)
. .+.+ |+.|+...+.++
T Consensus 78 p~i~aI~~~rGG~g~~rlL~~l 99 (336)
T 3sr3_A 78 PNVSCIMSTIGGMNSNSLLPYI 99 (336)
T ss_dssp TTEEEEEESCCCSCGGGGGGGS
T ss_pred CCCCEEEEccccccHHHHhhhc
Confidence 3 2332 778888888765
No 439
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=24.37 E-value=2.7e+02 Score=24.12 Aligned_cols=71 Identities=10% Similarity=-0.070 Sum_probs=45.7
Q ss_pred CCEEEEcCC-CCHHHHHHHHHHHHHcCCcEEEecCCCC-hHHh----hcCceEEEecCChhHHHHHHHHHHHhcCCce
Q 025140 56 GKGYVDVST-VDGDTSKLINGHIKATGASFLEAPVSGS-KKPA----EDGQLIFLAAGDKSLYNTVAPLLDIMGKSRF 127 (257)
Q Consensus 56 g~~ivd~ST-~~p~~~~~la~~~~~~G~~~vdapV~g~-~~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~ 127 (257)
-.+.||... -++++ .++.+.+++.|+.|++-|+.-. .... ..-..+|..+..-.....++++++.=..+++
T Consensus 206 ~~L~vDaN~~w~~~~-~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v 282 (400)
T 3mwc_A 206 FPLWTDANSSFELDQ-WETFKAMDAAKCLFHEQPLHYEALLDLKELGERIETPICLDESLISSRVAEFVAKLGISNIW 282 (400)
T ss_dssp SCEEEECTTCCCGGG-HHHHHHHGGGCCSCEESCSCTTCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHTTCCSEE
T ss_pred CEEEEeCCCCCCHHH-HHHHHHHHhcCCCEEeCCCChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhcCCCCEE
Confidence 368889864 45666 7888999999999999998643 1111 1223466666555555666777764444443
No 440
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=24.24 E-value=26 Score=29.94 Aligned_cols=34 Identities=21% Similarity=0.051 Sum_probs=21.6
Q ss_pred cCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCC
Q 025140 25 SCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTV 65 (257)
Q Consensus 25 ~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~ 65 (257)
++|+||.|++.....+.+ ... +..|..+||.|+-
T Consensus 61 ~~DvV~~a~g~~~s~~~a----~~~---~~~G~~vId~s~~ 94 (331)
T 2yv3_A 61 PVDLVLASAGGGISRAKA----LVW---AEGGALVVDNSSA 94 (331)
T ss_dssp CCSEEEECSHHHHHHHHH----HHH---HHTTCEEEECSSS
T ss_pred CCCEEEECCCccchHHHH----HHH---HHCCCEEEECCCc
Confidence 788888888865443322 112 2356788888875
No 441
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=23.89 E-value=1.2e+02 Score=25.79 Aligned_cols=72 Identities=10% Similarity=0.110 Sum_probs=46.8
Q ss_pred CCEEEEcCC-CCHHHHH-HHHHHHHHcCCcEEEecCCCChH-H----hhcCceEEEecCChhHHHHHHHHHHHhcCCce
Q 025140 56 GKGYVDVST-VDGDTSK-LINGHIKATGASFLEAPVSGSKK-P----AEDGQLIFLAAGDKSLYNTVAPLLDIMGKSRF 127 (257)
Q Consensus 56 g~~ivd~ST-~~p~~~~-~la~~~~~~G~~~vdapV~g~~~-~----a~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~ 127 (257)
-.+.||... -+++++. ++.+.+++.|+.|++-|+...-. . .+.-..+++.++.-...+.++++++.=..+++
T Consensus 186 ~~l~vDan~~~~~~~a~~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v 264 (369)
T 2p8b_A 186 IAIRVDVNQGWKNSANTLTALRSLGHLNIDWIEQPVIADDIDAMAHIRSKTDLPLMIDEGLKSSREMRQIIKLEAADKV 264 (369)
T ss_dssp SEEEEECTTTTBSHHHHHHHHHTSTTSCCSCEECCBCTTCHHHHHHHHHTCCSCEEESTTCCSHHHHHHHHHHTCCSEE
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHHhCCCcEEECCCCcccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEE
Confidence 357788753 4678888 99999999999999999843211 1 11224566666655455667777765444443
No 442
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=23.84 E-value=13 Score=32.82 Aligned_cols=42 Identities=12% Similarity=0.045 Sum_probs=26.9
Q ss_pred HHHhcCCEEEEecCChHHHHHHhcCCCcccccC-CCCCEEEEcCC
Q 025140 21 EVAASCDVTFAMLADPESAMDVACGKHGAASGM-GPGKGYVDVST 64 (257)
Q Consensus 21 ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l-~~g~~ivd~ST 64 (257)
+.++++|+||.|+.-....-.++. ++.++.+ ++|.+|||.|-
T Consensus 259 ~~i~~aDivIn~vlig~~aP~Lvt--~e~v~~m~k~gsVIVDVA~ 301 (394)
T 2qrj_A 259 DEIPQADIFINCIYLSKPIAPFTN--MEKLNNPNRRLRTVVDVSA 301 (394)
T ss_dssp THHHHSSEEEECCCCCSSCCCSCC--HHHHCCTTCCCCEEEETTC
T ss_pred hhHhhCCEEEECcCcCCCCCcccC--HHHHhcCcCCCeEEEEEec
Confidence 567789999999985221101111 2334557 89999999984
No 443
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=23.54 E-value=79 Score=16.90 Aligned_cols=27 Identities=4% Similarity=-0.020 Sum_probs=17.4
Q ss_pred EEEecCChhHHHHHHHHHHHhcCCcee
Q 025140 102 IFLAAGDKSLYNTVAPLLDIMGKSRFY 128 (257)
Q Consensus 102 ~i~~gg~~~~~~~~~~ll~~~~~~~~~ 128 (257)
+|++||..+-+..+.+--+.-.-++.+
T Consensus 7 tiwvggtpeelkklkeeakkanirvtf 33 (36)
T 2ki0_A 7 TIWVGGTPEELKKLKEEAKKANIRVTF 33 (36)
T ss_dssp CCCBCCCHHHHHHHHHHHHHHCCCCCB
T ss_pred EEEecCCHHHHHHHHHHHHhccEEEEe
Confidence 688999887777766655444444433
No 444
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=23.41 E-value=1.1e+02 Score=26.69 Aligned_cols=69 Identities=9% Similarity=-0.070 Sum_probs=45.4
Q ss_pred CCCEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEecCCCChH----H-hhcCceEEEecCChhHHHHHHHHHHHhc
Q 025140 55 PGKGYVDVS-TVDGDTSKLINGHIKATGASFLEAPVSGSKK----P-AEDGQLIFLAAGDKSLYNTVAPLLDIMG 123 (257)
Q Consensus 55 ~g~~ivd~S-T~~p~~~~~la~~~~~~G~~~vdapV~g~~~----~-a~~g~l~i~~gg~~~~~~~~~~ll~~~~ 123 (257)
.-.+.||.. .-+++++.++++.+++.++.|++-|+...-. . .+.-..+|..|-.--....++++++.=+
T Consensus 221 ~~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a 295 (421)
T 4hnl_A 221 QFQMLHDVHERLHPNQAIQFAKAAEPYQLFFLEDILPPDQSHWLTQLRSQSATPIATGELFNNPMEWQELVKNRQ 295 (421)
T ss_dssp SSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEECCSCGGGGGGHHHHHTTCCCCEEECTTCCSGGGTHHHHHTTC
T ss_pred CceEeccccccCCHHHHHHHHHHhhhhhhcccccCCcccchHHHHHHHhcCCCCeecCcceehhHHHHHHHhcCC
Confidence 346888986 4789999999999999999999999853211 1 1222345555433334455677766433
No 445
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=23.37 E-value=2.4e+02 Score=21.15 Aligned_cols=69 Identities=13% Similarity=-0.115 Sum_probs=42.4
Q ss_pred HHHHhcCCEEEEecCCh-----HHHHHHhcCCCccc----ccCCCCCEEEE---cCCC---CHHHHHHHHHHHHHcCCcE
Q 025140 20 DEVAASCDVTFAMLADP-----ESAMDVACGKHGAA----SGMGPGKGYVD---VSTV---DGDTSKLINGHIKATGASF 84 (257)
Q Consensus 20 ~ea~~~advvi~~l~~~-----~~v~~v~~~~~~~~----~~l~~g~~ivd---~ST~---~p~~~~~la~~~~~~G~~~ 84 (257)
.+.+.++|.||+..|.. ..++..+ +.+. ....+|+.+.- .... .......+...+...|..+
T Consensus 65 ~~~l~~aD~ii~gsP~y~~~~~~~lk~~l---d~~~~~~~~~~l~gK~~~~~~t~g~~~~g~~~~~~~l~~~l~~~g~~~ 141 (199)
T 2zki_A 65 LDDMRWADGFAIGSPTRYGNMAGGLKTFL---DTTAILWKDNVLYGKPVTFFTEASTVHGGHETTILTMSTYAYHFGMII 141 (199)
T ss_dssp HHHHHHCSEEEEEEECBTTBCCHHHHHHH---HTTHHHHHTTSSTTCEEEEEEEBSSTTSSSSHHHHHHTHHHHHHTCEE
T ss_pred HHHHHhCCEEEEECCccccCccHHHHHHH---HHhhhcccccccCCCEEEEEEeCCCCCCCHHHHHHHHHHHHHHCCeEE
Confidence 56677899999998874 4566666 3221 11234554322 2221 1235667888888889998
Q ss_pred EEecCCC
Q 025140 85 LEAPVSG 91 (257)
Q Consensus 85 vdapV~g 91 (257)
+..++..
T Consensus 142 ~~~~~~~ 148 (199)
T 2zki_A 142 VPIGYGI 148 (199)
T ss_dssp CCCTTCS
T ss_pred eCCCcCC
Confidence 8877653
No 446
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=23.15 E-value=2.6e+02 Score=24.16 Aligned_cols=72 Identities=14% Similarity=-0.028 Sum_probs=45.3
Q ss_pred CCCEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEecCCCChHHh---hcCceEEEecCChhHHHHHHHHHHHhcCCce
Q 025140 55 PGKGYVDVS-TVDGDTSKLINGHIKATGASFLEAPVSGSKKPA---EDGQLIFLAAGDKSLYNTVAPLLDIMGKSRF 127 (257)
Q Consensus 55 ~g~~ivd~S-T~~p~~~~~la~~~~~~G~~~vdapV~g~~~~a---~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~ 127 (257)
.-.+.||.. .-+++++.++.+.+++.++ |++-|+-.-...+ +.-..+|..+..-.....++++++.=+..++
T Consensus 210 ~~~L~vDaN~~w~~~~A~~~~~~L~~~~i-~iEeP~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~d~v 285 (391)
T 4e8g_A 210 GTRLAVDGNRSLPSRDALRLSRECPEIPF-VLEQPCNTLEEIAAIRGRVQHGIYLDESGEDLSTVIRAAGQGLCDGF 285 (391)
T ss_dssp TCEEEEECTTCCCHHHHHHHHHHCTTSCE-EEESCSSSHHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTCCSEE
T ss_pred CCeEEEeCCCCCCHHHHHHHHHHHhhcCe-EEecCCccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEE
Confidence 346889986 4678999999999999999 9999953211111 1223455555444445566677654444443
No 447
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=23.02 E-value=1.3e+02 Score=25.83 Aligned_cols=74 Identities=8% Similarity=-0.039 Sum_probs=47.9
Q ss_pred CCCEEEEcCC-CCHHHHHHHHHHHHHcCCcEEEecCCCC-hHHh----hcCceEEEecCChhHHHHHHHHHHHhcCCcee
Q 025140 55 PGKGYVDVST-VDGDTSKLINGHIKATGASFLEAPVSGS-KKPA----EDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFY 128 (257)
Q Consensus 55 ~g~~ivd~ST-~~p~~~~~la~~~~~~G~~~vdapV~g~-~~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~ 128 (257)
.-.+.||... -++++ .++.+.+++.|+.|++-|+... .... +.-..+|+.+..-.....++++++.=.-+++.
T Consensus 189 ~~~l~vDan~~~~~~~-~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ 267 (375)
T 1r0m_A 189 DIRLTVDANSAYTLAD-AGRLRQLDEYDLTYIEQPLAWDDLVDHAELARRIRTPLCLDESVASASDARKALALGAGGVIN 267 (375)
T ss_dssp TSCEEEECTTCCCGGG-HHHHHTTGGGCCSCEECCSCTTCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTSCSEEE
T ss_pred CCeEEEeCCCCCCHHH-HHHHHHHHhCCCcEEECCCCcccHHHHHHHHHhCCCCEEecCccCCHHHHHHHHHhCCCCEEE
Confidence 3468899753 46777 8999999999999999998532 1111 12234666666545556777777655444443
Q ss_pred c
Q 025140 129 L 129 (257)
Q Consensus 129 ~ 129 (257)
+
T Consensus 268 i 268 (375)
T 1r0m_A 268 L 268 (375)
T ss_dssp E
T ss_pred E
Confidence 3
No 448
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=22.75 E-value=94 Score=21.99 Aligned_cols=17 Identities=12% Similarity=0.112 Sum_probs=11.3
Q ss_pred hcCCEEEEecCChHHHH
Q 025140 24 ASCDVTFAMLADPESAM 40 (257)
Q Consensus 24 ~~advvi~~l~~~~~v~ 40 (257)
.++|+||+++++++.-.
T Consensus 69 ~~~d~vi~~~~~~~~n~ 85 (141)
T 3llv_A 69 EGVSAVLITGSDDEFNL 85 (141)
T ss_dssp TTCSEEEECCSCHHHHH
T ss_pred ccCCEEEEecCCHHHHH
Confidence 46788888877655433
No 449
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=22.65 E-value=96 Score=26.27 Aligned_cols=23 Identities=13% Similarity=0.156 Sum_probs=17.6
Q ss_pred cccCCHHHHHhcCCEEEEecCCh
Q 025140 14 RYQPSPDEVAASCDVTFAMLADP 36 (257)
Q Consensus 14 ~~~~s~~ea~~~advvi~~l~~~ 36 (257)
++..+..+++++||+||++.+.+
T Consensus 65 ~i~~~~~~a~~~aDvVii~ag~~ 87 (326)
T 2zqz_A 65 KIYSAEYSDAKDADLVVITAGAP 87 (326)
T ss_dssp EEEECCGGGGGGCSEEEECCCCC
T ss_pred EEEECCHHHhCCCCEEEEcCCCC
Confidence 34345678899999999998654
No 450
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=22.63 E-value=1.9e+02 Score=21.73 Aligned_cols=65 Identities=12% Similarity=-0.107 Sum_probs=37.9
Q ss_pred HHHHhcCCEEEEecCCh-----HHHHHHhcCCCcccc---cCCCCCEEEEcCC-C--C--H-HHHHHHHHHHHHcCCcEE
Q 025140 20 DEVAASCDVTFAMLADP-----ESAMDVACGKHGAAS---GMGPGKGYVDVST-V--D--G-DTSKLINGHIKATGASFL 85 (257)
Q Consensus 20 ~ea~~~advvi~~l~~~-----~~v~~v~~~~~~~~~---~l~~g~~ivd~ST-~--~--p-~~~~~la~~~~~~G~~~v 85 (257)
.+-+.++|.||+..|.. ..++..+ +.+.. ...+|+.++-.+| . . . ...+++...+...|..++
T Consensus 47 ~~~l~~aD~ii~gsP~y~g~~~~~lk~fl---d~~~~~~~~~l~gk~~~~~~t~g~~~g~~~~~l~~l~~~l~~~g~~~~ 123 (188)
T 2ark_A 47 KEDVLWADGLAVGSPTNMGLVSWKMKRFF---DDVLGDLWGEIDGKIACAFSSSGGWGGGNEVACMSILTMLMNFGFLVF 123 (188)
T ss_dssp HHHHHHCSEEEEEEECBTTBCCHHHHHHH---HHTGGGTTTSCTTCEEEEEEEESSBTSSHHHHHHHHHHHHHHTTCEEC
T ss_pred HHHHHhCCEEEEEeCccCCcCCHHHHHHH---HHHhhhhHHHhCCCeEEEEEECCCCCCCHHHHHHHHHHHHHHCCcEEe
Confidence 45567899999998884 4566665 32222 1234554443333 1 1 2 345566677777888776
Q ss_pred Ee
Q 025140 86 EA 87 (257)
Q Consensus 86 da 87 (257)
..
T Consensus 124 ~~ 125 (188)
T 2ark_A 124 GV 125 (188)
T ss_dssp CE
T ss_pred CC
Confidence 54
No 451
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=22.45 E-value=1.7e+02 Score=25.22 Aligned_cols=35 Identities=11% Similarity=0.121 Sum_probs=29.9
Q ss_pred CEE-EEcC-CCCHHHHHHHHHHHHHcCC--cEEEecCCC
Q 025140 57 KGY-VDVS-TVDGDTSKLINGHIKATGA--SFLEAPVSG 91 (257)
Q Consensus 57 ~~i-vd~S-T~~p~~~~~la~~~~~~G~--~~vdapV~g 91 (257)
.+. ||.. .-+++++.++++.+++.|+ .|++-|+..
T Consensus 188 ~l~~vDan~~~~~~~A~~~~~~l~~~~i~~~~iEqP~~~ 226 (391)
T 3gd6_A 188 RIKSYDFSHLLNWKDAHRAIKRLTKYDLGLEMIESPAPR 226 (391)
T ss_dssp EEEEEECTTCSCHHHHHHHHHHHTTCCSSCCEEECCSCT
T ss_pred cEEEecCCCCcCHHHHHHHHHHHHhcCCCcceecCCCCh
Confidence 577 8885 4678999999999999999 999999853
No 452
>2p3z_A L-rhamnonate dehydratase; enolase, structural genomics, PSI, protein structure initiat YORK structural genomics research consortium; 1.80A {Salmonella typhimurium LT2} PDB: 3box_A 3cxo_A* 2gsh_A 3d47_A 3d46_A 2i5q_A
Probab=21.66 E-value=3.5e+02 Score=23.58 Aligned_cols=36 Identities=8% Similarity=-0.069 Sum_probs=30.5
Q ss_pred CCEEEEcCC-CCHHHHHHHHHHHHHcCCcEEEecCCC
Q 025140 56 GKGYVDVST-VDGDTSKLINGHIKATGASFLEAPVSG 91 (257)
Q Consensus 56 g~~ivd~ST-~~p~~~~~la~~~~~~G~~~vdapV~g 91 (257)
-.+.||... -+++++.++.+.+++.++.|++-|+.-
T Consensus 223 ~~L~vDaN~~~~~~~Ai~~~~~l~~~~i~~iEqPl~~ 259 (415)
T 2p3z_A 223 FWLMLDCWMSQDVNYATKLAHACAPFNLKWIEECLPP 259 (415)
T ss_dssp SEEEEECTTCCCHHHHHHHHHHHGGGTCCEEECCSCT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHhhcCCceEeCCCCc
Confidence 468899864 468888999999999999999999964
No 453
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=21.63 E-value=1e+02 Score=26.36 Aligned_cols=71 Identities=11% Similarity=-0.028 Sum_probs=45.5
Q ss_pred CEEEEcCC-CCHHHHHHHHHHHHHcCCcEEEecCCCCh-HHh----hcCceEEEecCChhHHHHHHHHHHHhcCCcee
Q 025140 57 KGYVDVST-VDGDTSKLINGHIKATGASFLEAPVSGSK-KPA----EDGQLIFLAAGDKSLYNTVAPLLDIMGKSRFY 128 (257)
Q Consensus 57 ~~ivd~ST-~~p~~~~~la~~~~~~G~~~vdapV~g~~-~~a----~~g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~ 128 (257)
.+.||... -++++ .++.+.+++.|+.|++-|+...- ... +.-..+++.++.-...+.++++++.=..+++.
T Consensus 185 ~l~vDan~~~~~~~-~~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ 261 (368)
T 1sjd_A 185 LLQVDANTAYTLGD-APQLARLDPFGLLLIEQPLEEEDVLGHAELARRIQTPICLDESIVSARAAADAIKLGAVQIVN 261 (368)
T ss_dssp EEEEECTTCCCGGG-HHHHHTTGGGCCSEEECCSCTTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTTCCSEEE
T ss_pred eEEEeccCCCCHHH-HHHHHHHHhcCCCeEeCCCChhhHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEEE
Confidence 47788763 46788 89999999999999999985321 111 12234666665544556677777554334433
No 454
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=21.56 E-value=45 Score=28.57 Aligned_cols=37 Identities=24% Similarity=0.165 Sum_probs=20.4
Q ss_pred HhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCC
Q 025140 23 AASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVD 66 (257)
Q Consensus 23 ~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~ 66 (257)
.+++|+||.|+|.....+ .. ... +..|..+||.|...
T Consensus 66 ~~~~DvV~~a~g~~~s~~-~a---~~~---~~aG~kvId~Sa~~ 102 (340)
T 2hjs_A 66 FSSVGLAFFAAAAEVSRA-HA---ERA---RAAGCSVIDLSGAL 102 (340)
T ss_dssp GGGCSEEEECSCHHHHHH-HH---HHH---HHTTCEEEETTCTT
T ss_pred hcCCCEEEEcCCcHHHHH-HH---HHH---HHCCCEEEEeCCCC
Confidence 457788888887654322 22 111 23456677777543
No 455
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=21.30 E-value=2.3e+02 Score=23.40 Aligned_cols=52 Identities=17% Similarity=0.153 Sum_probs=31.1
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEecCCCChHHhhcCceEEEecCChhHHHHHHHHHHHhc
Q 025140 65 VDGDTSKLINGHIKATGASFLEAPVSGSKKPAEDGQLIFLAAGDKSLYNTVAPLLDIMG 123 (257)
Q Consensus 65 ~~p~~~~~la~~~~~~G~~~vdapV~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~~ 123 (257)
.+++.+.+.+....+.|+++||--.-.+.+++. .++.+ +-++++.|+++.+.
T Consensus 26 ~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~------~v~~~-eE~~Rv~pvi~~l~ 77 (280)
T 1eye_A 26 LDLDDAVKHGLAMAAAGAGIVDVGGESSRPGAT------RVDPA-VETSRVIPVVKELA 77 (280)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECC---------------------HHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCccCCCCCC------CCCHH-HHHHHHHHHHHHhh
Confidence 468999999999999999999987533323321 22333 33577778887773
No 456
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=21.16 E-value=84 Score=26.39 Aligned_cols=20 Identities=5% Similarity=-0.006 Sum_probs=15.7
Q ss_pred CCHHHHHhcCCEEEEecCCh
Q 025140 17 PSPDEVAASCDVTFAMLADP 36 (257)
Q Consensus 17 ~s~~ea~~~advvi~~l~~~ 36 (257)
.+..+++++||+||++.+-+
T Consensus 66 ~~~~~al~~aDvViia~~~~ 85 (316)
T 1ldn_A 66 HGDYDDCRDADLVVICAGAN 85 (316)
T ss_dssp ECCGGGTTTCSEEEECCSCC
T ss_pred cCcHHHhCCCCEEEEcCCCC
Confidence 34567899999999996554
No 457
>3cwq_A Para family chromosome partitioning protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: ADP; 2.47A {Synechocystis SP}
Probab=21.16 E-value=71 Score=24.76 Aligned_cols=76 Identities=7% Similarity=0.033 Sum_probs=38.9
Q ss_pred CCHHHHHhcCCEEEEecCC-hHHHHHHhcCCCcccc-cCCCCCEEEEcCCCCH-HHHHHHHHHHHHcCCcEEEecCCCC
Q 025140 17 PSPDEVAASCDVTFAMLAD-PESAMDVACGKHGAAS-GMGPGKGYVDVSTVDG-DTSKLINGHIKATGASFLEAPVSGS 92 (257)
Q Consensus 17 ~s~~ea~~~advvi~~l~~-~~~v~~v~~~~~~~~~-~l~~g~~ivd~ST~~p-~~~~~la~~~~~~G~~~vdapV~g~ 92 (257)
.....++..+|.||+++.. ...+..+..--+.+-+ .-.+-.+|++...... ...+++.+.+++.|..+++..|.-.
T Consensus 82 ~~~~~~l~~aD~viiv~~~~~~~~~~~~~~~~~l~~~~~~~~~vv~N~~~~~~~~~~~~~~~~l~~~g~~v~~~~Ip~~ 160 (209)
T 3cwq_A 82 EDLEALADGCDLLVIPSTPDALALDALMLTIETLQKLGNNRFRILLTIIPPYPSKDGDEARQLLTTAGLPLFKRGIKRY 160 (209)
T ss_dssp SHHHHHHHTSSEEEEEECSSHHHHHHHHHHHHHHHHTCSSSEEEEECSBCCTTSCHHHHHHHHHHHTTCCBCSSCCBCC
T ss_pred HHHHHHHHHCCEEEEEecCCchhHHHHHHHHHHHHhccCCCEEEEEEecCCccchHHHHHHHHHHHcCCchhhccCCCc
Confidence 3345677889988776654 4443332210011111 0112346667655443 3456777778776765555444433
No 458
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=20.97 E-value=93 Score=23.45 Aligned_cols=75 Identities=11% Similarity=0.097 Sum_probs=36.5
Q ss_pred HHHHHhcCCEEEEecCChH---HHHHHhcCCCccc---ccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEecCCCC
Q 025140 19 PDEVAASCDVTFAMLADPE---SAMDVACGKHGAA---SGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGS 92 (257)
Q Consensus 19 ~~ea~~~advvi~~l~~~~---~v~~v~~~~~~~~---~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vdapV~g~ 92 (257)
...++..+|.||+++.... .+..++.--+.+. ..+.- .+|++.........+++.+.+++.|..+++..|.-.
T Consensus 91 ~~~~l~~ad~viiv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~vv~N~~~~~~~~~~~~~~~l~~~~~~vl~~~Ip~~ 169 (206)
T 4dzz_A 91 TSAAVMVSDLVIIPVTPSPLDFSAAGSVVTVLEAQAYSRKVEA-RFLITRKIEMATMLNVLKESIKDTGVKAFRTAITQR 169 (206)
T ss_dssp HHHHHHHCSEEEEEECSCTTTHHHHHHHHHHHTTSCGGGCCEE-EEEECSBCTTEEEEHHHHHHHHHHTCCBCSSCCBCC
T ss_pred HHHHHHHCCEEEEEecCCHHHHHHHHHHHHHHHHHHhCCCCcE-EEEEeccCCCchHHHHHHHHHHHcCCceeecccccc
Confidence 3556777888777664322 2333321001110 11111 466666554444445666667666766665555444
Q ss_pred hH
Q 025140 93 KK 94 (257)
Q Consensus 93 ~~ 94 (257)
+.
T Consensus 170 ~~ 171 (206)
T 4dzz_A 170 QV 171 (206)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 459
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=20.82 E-value=1.6e+02 Score=24.51 Aligned_cols=20 Identities=0% Similarity=-0.026 Sum_probs=16.1
Q ss_pred cCCHHHHHhcCCEEEEecCCh
Q 025140 16 QPSPDEVAASCDVTFAMLADP 36 (257)
Q Consensus 16 ~~s~~ea~~~advvi~~l~~~ 36 (257)
.++ .+++++||+||++.+.+
T Consensus 61 t~d-~~a~~~aDiVViaag~~ 80 (294)
T 1oju_A 61 GAD-YSLLKGSEIIVVTAGLA 80 (294)
T ss_dssp ESC-GGGGTTCSEEEECCCCC
T ss_pred eCC-HHHhCCCCEEEECCCCC
Confidence 345 88999999999997654
No 460
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=20.63 E-value=96 Score=27.39 Aligned_cols=73 Identities=11% Similarity=-0.018 Sum_probs=48.5
Q ss_pred CCEEEEcC-CCCHHHHHHHHHHHHHcCCcEEEecCCCCh-HH---hhc--CceEEEecCChhHHHHHHHHHHHhcCCcee
Q 025140 56 GKGYVDVS-TVDGDTSKLINGHIKATGASFLEAPVSGSK-KP---AED--GQLIFLAAGDKSLYNTVAPLLDIMGKSRFY 128 (257)
Q Consensus 56 g~~ivd~S-T~~p~~~~~la~~~~~~G~~~vdapV~g~~-~~---a~~--g~l~i~~gg~~~~~~~~~~ll~~~~~~~~~ 128 (257)
-.+.||.. .-+++++.++.+.+++.|+.|++-|+...- .. ... ...+++.++.-...+.++++++.=..+++.
T Consensus 243 ~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ 322 (441)
T 2hxt_A 243 IAMAVDANQRWDVGPAIDWMRQLAEFDIAWIEEPTSPDDVLGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQAGAVDLIQ 322 (441)
T ss_dssp SEEEEECTTCCCHHHHHHHHHTTGGGCCSCEECCSCTTCHHHHHHHHHHHTTSCEEECTTCCSHHHHHHHHHHTCCSEEC
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHhcCCCeeeCCCCHHHHHHHHHHHhhCCCCCEEEeCCcCCHHHHHHHHHcCCCCEEE
Confidence 35788885 457899999999999999999999986321 11 111 135677666554556677777654444433
No 461
>4e16_A Precorrin-4 C(11)-methyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.49A {Clostridium difficile}
Probab=20.53 E-value=3.3e+02 Score=21.73 Aligned_cols=77 Identities=13% Similarity=0.120 Sum_probs=38.2
Q ss_pred HHHHHhcCCEEEEecCChHHHHHHhcCCCcccccCCCCCEEEEcCCCCHHHHHHHHHHHHHcCCcEEEecCCCChHHhhc
Q 025140 19 PDEVAASCDVTFAMLADPESAMDVACGKHGAASGMGPGKGYVDVSTVDGDTSKLINGHIKATGASFLEAPVSGSKKPAED 98 (257)
Q Consensus 19 ~~ea~~~advvi~~l~~~~~v~~v~~~~~~~~~~l~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~vdapV~g~~~~a~~ 98 (257)
..+++++||+|+.. +...- ..+++.+.+++.+++......+ ++.+.+.+ .+.+
T Consensus 24 A~~~L~~advv~~~--~~~~~-------~~~l~~~~~~~~~~~~~~~~~~---~~~~~i~~---------------~~~~ 76 (253)
T 4e16_A 24 GYKLLSNADVVIYA--GSLVN-------PELLEYCKEDCQIHNSAHMDLQ---EIIDVMRE---------------GIEN 76 (253)
T ss_dssp HHHHHHHCSEEEEC--TTTSC-------GGGGGGSCTTCEEEEGGGCCHH---HHHHHHHH---------------HHHT
T ss_pred HHHHHHhCCEEEEe--CCCCC-------HHHHhhcCCCCEEEecCCCCHH---HHHHHHHH---------------HHHC
Confidence 45788999999862 11000 1233344455666664333333 33333322 1112
Q ss_pred -CceEEEecCChhHHHHHHHHHHHh
Q 025140 99 -GQLIFLAAGDKSLYNTVAPLLDIM 122 (257)
Q Consensus 99 -g~l~i~~gg~~~~~~~~~~ll~~~ 122 (257)
....++.+||.-.|.....+++.+
T Consensus 77 g~~V~~l~~GDP~i~~~~~~l~~~l 101 (253)
T 4e16_A 77 NKSVVRLQTGDFSIYGSIREQVEDL 101 (253)
T ss_dssp TCCEEEEESBCTTTTCCHHHHHHHH
T ss_pred CCcEEEEeCCCCccccCHHHHHHHH
Confidence 234556677777766665555444
Done!