Query 025141
Match_columns 257
No_of_seqs 209 out of 2356
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 04:31:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025141.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025141hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3o4f_A Spermidine synthase; am 100.0 2.6E-51 8.9E-56 363.1 21.1 223 27-255 9-232 (294)
2 3c6k_A Spermine synthase; sper 100.0 3.2E-42 1.1E-46 313.5 18.0 222 20-248 123-357 (381)
3 1iy9_A Spermidine synthase; ro 100.0 5.4E-41 1.8E-45 296.0 24.6 217 29-250 2-218 (275)
4 3adn_A Spermidine synthase; am 100.0 1.1E-41 3.7E-46 303.3 17.5 221 28-254 10-231 (294)
5 2i7c_A Spermidine synthase; tr 100.0 2.9E-39 9.9E-44 286.0 24.2 222 29-255 3-226 (283)
6 2o07_A Spermidine synthase; st 100.0 2.1E-38 7.2E-43 283.3 22.0 224 22-250 13-238 (304)
7 1inl_A Spermidine synthase; be 100.0 2.4E-38 8.3E-43 281.8 22.2 220 27-250 14-234 (296)
8 1mjf_A Spermidine synthase; sp 100.0 5.9E-38 2E-42 277.2 23.3 214 29-250 2-222 (281)
9 1uir_A Polyamine aminopropyltr 100.0 3.9E-38 1.3E-42 282.6 22.4 221 27-250 2-225 (314)
10 2b2c_A Spermidine synthase; be 100.0 5.5E-38 1.9E-42 281.7 22.7 211 36-251 42-252 (314)
11 2qfm_A Spermine synthase; sper 100.0 4.1E-38 1.4E-42 285.5 21.5 210 38-255 126-349 (364)
12 2pt6_A Spermidine synthase; tr 100.0 5.8E-37 2E-41 275.9 23.8 219 27-250 39-259 (321)
13 3bwc_A Spermidine synthase; SA 100.0 1.9E-36 6.5E-41 270.5 24.0 224 23-251 11-241 (304)
14 2cmg_A Spermidine synthase; tr 100.0 6.7E-37 2.3E-41 268.2 16.6 200 30-250 1-200 (262)
15 1xj5_A Spermidine synthase 1; 100.0 1.3E-35 4.3E-40 268.5 24.3 220 26-250 42-265 (334)
16 3gjy_A Spermidine synthase; AP 100.0 8.3E-32 2.8E-36 241.1 17.8 186 55-250 29-228 (317)
17 3p9n_A Possible methyltransfer 99.6 1.9E-14 6.4E-19 118.4 14.9 109 101-220 43-154 (189)
18 3orh_A Guanidinoacetate N-meth 99.6 3.7E-15 1.3E-19 127.6 10.3 121 86-218 47-169 (236)
19 3dr5_A Putative O-methyltransf 99.5 2.2E-14 7.4E-19 121.9 11.1 103 104-218 58-162 (221)
20 3ntv_A MW1564 protein; rossman 99.5 3.2E-14 1.1E-18 121.2 11.6 105 101-218 70-175 (232)
21 3dxy_A TRNA (guanine-N(7)-)-me 99.5 1.1E-13 3.6E-18 117.4 14.0 129 102-241 34-166 (218)
22 3tfw_A Putative O-methyltransf 99.5 7.4E-14 2.5E-18 120.3 13.0 106 101-219 62-170 (248)
23 3u81_A Catechol O-methyltransf 99.5 1.3E-13 4.6E-18 116.2 13.1 108 101-219 57-170 (221)
24 1sui_A Caffeoyl-COA O-methyltr 99.5 6.6E-14 2.2E-18 120.8 11.2 105 101-218 78-189 (247)
25 3c3p_A Methyltransferase; NP_9 99.5 8.4E-14 2.9E-18 116.3 11.5 104 101-218 55-159 (210)
26 1dus_A MJ0882; hypothetical pr 99.5 5.6E-13 1.9E-17 108.5 15.9 132 101-250 51-182 (194)
27 3duw_A OMT, O-methyltransferas 99.5 9.3E-14 3.2E-18 116.9 11.6 105 101-218 57-166 (223)
28 2ozv_A Hypothetical protein AT 99.5 7.2E-14 2.5E-18 121.3 10.7 138 101-249 35-193 (260)
29 3c3y_A Pfomt, O-methyltransfer 99.5 4.4E-14 1.5E-18 121.0 9.0 105 101-218 69-180 (237)
30 1yzh_A TRNA (guanine-N(7)-)-me 99.5 4.1E-13 1.4E-17 112.5 14.5 135 101-246 40-178 (214)
31 3hm2_A Precorrin-6Y C5,15-meth 99.5 6.8E-13 2.3E-17 107.1 15.1 122 101-243 24-145 (178)
32 3e05_A Precorrin-6Y C5,15-meth 99.5 7.6E-13 2.6E-17 109.9 15.5 120 101-241 39-158 (204)
33 2esr_A Methyltransferase; stru 99.5 1E-13 3.5E-18 112.4 9.7 110 101-222 30-141 (177)
34 3tr6_A O-methyltransferase; ce 99.5 1.1E-13 3.8E-18 116.4 9.8 104 102-218 64-173 (225)
35 2fca_A TRNA (guanine-N(7)-)-me 99.5 7.9E-13 2.7E-17 111.2 14.5 130 101-241 37-169 (213)
36 3r3h_A O-methyltransferase, SA 99.5 2.9E-14 9.9E-19 122.6 5.8 105 101-218 59-169 (242)
37 2fpo_A Methylase YHHF; structu 99.5 4E-13 1.4E-17 112.1 12.4 106 102-220 54-161 (202)
38 2ift_A Putative methylase HI07 99.5 3.5E-13 1.2E-17 112.4 11.9 109 102-221 53-165 (201)
39 3fpf_A Mtnas, putative unchara 99.5 3.2E-13 1.1E-17 119.5 12.0 103 99-219 119-222 (298)
40 4dzr_A Protein-(glutamine-N5) 99.5 1.1E-13 3.9E-18 114.6 8.6 139 101-249 29-191 (215)
41 2fhp_A Methylase, putative; al 99.5 2.4E-13 8.1E-18 110.7 10.1 109 101-221 43-156 (187)
42 3lpm_A Putative methyltransfer 99.5 5.6E-13 1.9E-17 115.2 12.8 128 102-241 49-191 (259)
43 3evz_A Methyltransferase; NYSG 99.5 8.4E-13 2.9E-17 111.4 13.4 137 101-249 54-204 (230)
44 2frn_A Hypothetical protein PH 99.5 9E-14 3.1E-18 121.9 7.6 130 101-247 124-253 (278)
45 3mti_A RRNA methylase; SAM-dep 99.5 1.1E-12 3.6E-17 107.1 13.5 112 101-219 21-135 (185)
46 3mb5_A SAM-dependent methyltra 99.4 1.1E-12 3.7E-17 112.5 13.6 128 100-250 91-222 (255)
47 4gek_A TRNA (CMO5U34)-methyltr 99.4 5.7E-13 2E-17 115.9 11.7 108 100-218 68-177 (261)
48 1xdz_A Methyltransferase GIDB; 99.4 8.8E-13 3E-17 112.6 12.5 121 102-241 70-192 (240)
49 1ws6_A Methyltransferase; stru 99.4 6E-13 2.1E-17 106.6 10.6 105 102-222 41-150 (171)
50 1zx0_A Guanidinoacetate N-meth 99.4 5.4E-13 1.8E-17 113.4 10.7 109 101-218 59-169 (236)
51 3njr_A Precorrin-6Y methylase; 99.4 4.5E-12 1.6E-16 105.9 16.0 118 101-242 54-171 (204)
52 2avd_A Catechol-O-methyltransf 99.4 5E-13 1.7E-17 112.7 10.3 105 101-218 68-178 (229)
53 3ckk_A TRNA (guanine-N(7)-)-me 99.4 1E-12 3.4E-17 112.6 12.1 134 101-241 45-184 (235)
54 2igt_A SAM dependent methyltra 99.4 1.2E-12 4.2E-17 117.7 13.2 129 101-236 152-288 (332)
55 3eey_A Putative rRNA methylase 99.4 8.4E-13 2.9E-17 108.8 11.1 115 101-219 21-139 (197)
56 3g89_A Ribosomal RNA small sub 99.4 2.5E-12 8.7E-17 111.0 14.2 122 101-241 79-202 (249)
57 2b3t_A Protein methyltransfera 99.4 4.6E-12 1.6E-16 110.4 15.9 135 101-249 108-262 (276)
58 2b78_A Hypothetical protein SM 99.4 1.6E-12 5.6E-17 119.1 13.4 130 101-236 211-346 (385)
59 2gpy_A O-methyltransferase; st 99.4 6E-13 2.1E-17 112.8 9.6 104 102-218 54-159 (233)
60 3dlc_A Putative S-adenosyl-L-m 99.4 1.9E-12 6.6E-17 107.4 12.2 107 101-219 42-148 (219)
61 3grz_A L11 mtase, ribosomal pr 99.4 1.2E-12 4.2E-17 108.5 11.0 130 101-254 59-189 (205)
62 1l3i_A Precorrin-6Y methyltran 99.4 1.1E-11 3.8E-16 100.5 16.3 121 100-242 31-152 (192)
63 3cbg_A O-methyltransferase; cy 99.4 7.3E-13 2.5E-17 112.8 9.2 104 102-218 72-181 (232)
64 4hg2_A Methyltransferase type 99.4 9E-13 3.1E-17 114.5 9.4 99 100-219 37-135 (257)
65 2vdv_E TRNA (guanine-N(7)-)-me 99.4 3.3E-12 1.1E-16 109.5 12.1 117 102-219 49-173 (246)
66 2hnk_A SAM-dependent O-methylt 99.4 1.3E-12 4.4E-17 111.4 9.4 106 101-219 59-181 (239)
67 3a27_A TYW2, uncharacterized p 99.4 1.3E-12 4.6E-17 114.1 9.5 124 101-242 118-241 (272)
68 3hem_A Cyclopropane-fatty-acyl 99.4 2.7E-12 9.3E-17 113.0 11.4 110 101-219 71-183 (302)
69 3kkz_A Uncharacterized protein 99.4 2.9E-12 9.8E-17 110.7 11.3 106 101-219 45-150 (267)
70 3v97_A Ribosomal RNA large sub 99.4 5E-12 1.7E-16 124.2 13.9 117 102-222 539-660 (703)
71 4htf_A S-adenosylmethionine-de 99.4 3.8E-12 1.3E-16 110.9 11.6 108 100-219 66-173 (285)
72 3jwg_A HEN1, methyltransferase 99.4 3.5E-12 1.2E-16 106.8 10.9 109 101-218 28-140 (219)
73 3jwh_A HEN1; methyltransferase 99.4 5.8E-12 2E-16 105.3 11.8 112 101-218 28-140 (217)
74 1nt2_A Fibrillarin-like PRE-rR 99.4 5.7E-12 2E-16 106.0 11.8 138 101-253 56-198 (210)
75 3c0k_A UPF0064 protein YCCW; P 99.3 1.4E-11 4.9E-16 113.0 15.3 135 101-242 219-361 (396)
76 1wxx_A TT1595, hypothetical pr 99.3 8.9E-12 3E-16 113.9 13.7 136 102-248 209-353 (382)
77 1nkv_A Hypothetical protein YJ 99.3 3.7E-12 1.3E-16 108.9 10.4 105 101-218 35-139 (256)
78 3f4k_A Putative methyltransfer 99.3 4.8E-12 1.7E-16 108.2 11.1 106 101-219 45-150 (257)
79 1nv8_A HEMK protein; class I a 99.3 1.1E-11 3.7E-16 109.1 13.6 111 102-220 123-250 (284)
80 3dtn_A Putative methyltransfer 99.3 2.6E-12 8.8E-17 108.5 9.0 106 101-219 43-148 (234)
81 3dmg_A Probable ribosomal RNA 99.3 1.5E-11 5E-16 112.7 14.4 128 102-248 233-360 (381)
82 1g8a_A Fibrillarin-like PRE-rR 99.3 1.3E-11 4.6E-16 103.9 13.1 138 101-253 72-215 (227)
83 2yxd_A Probable cobalt-precorr 99.3 8.8E-11 3E-15 94.6 17.4 119 101-246 34-152 (183)
84 4dcm_A Ribosomal RNA large sub 99.3 5.8E-12 2E-16 115.1 11.4 133 102-248 222-354 (375)
85 1o54_A SAM-dependent O-methylt 99.3 8.2E-12 2.8E-16 108.8 11.8 125 101-248 111-237 (277)
86 1jsx_A Glucose-inhibited divis 99.3 7.5E-12 2.6E-16 103.7 11.0 102 102-220 65-166 (207)
87 4dmg_A Putative uncharacterize 99.3 2.1E-11 7.1E-16 112.1 15.1 133 102-246 214-352 (393)
88 2pwy_A TRNA (adenine-N(1)-)-me 99.3 1.3E-11 4.6E-16 105.5 12.8 125 101-248 95-222 (258)
89 3lbf_A Protein-L-isoaspartate 99.3 6.6E-12 2.3E-16 104.4 10.3 101 101-221 76-176 (210)
90 1yb2_A Hypothetical protein TA 99.3 7E-12 2.4E-16 109.3 10.8 125 101-249 109-236 (275)
91 2as0_A Hypothetical protein PH 99.3 1.3E-11 4.3E-16 113.3 13.1 114 102-222 217-338 (396)
92 2yvl_A TRMI protein, hypotheti 99.3 1.3E-11 4.5E-16 104.9 12.2 125 101-249 90-214 (248)
93 2nxc_A L11 mtase, ribosomal pr 99.3 1.6E-11 5.6E-16 106.0 12.8 129 101-254 119-248 (254)
94 1fbn_A MJ fibrillarin homologu 99.3 1.5E-11 5E-16 104.3 12.2 103 101-218 73-177 (230)
95 3dh0_A SAM dependent methyltra 99.3 4.6E-12 1.6E-16 105.8 8.6 143 101-255 36-186 (219)
96 1ve3_A Hypothetical protein PH 99.3 6E-12 2E-16 105.4 9.3 106 101-219 37-142 (227)
97 1vl5_A Unknown conserved prote 99.3 6.4E-12 2.2E-16 108.0 9.7 104 101-218 36-139 (260)
98 3ajd_A Putative methyltransfer 99.3 2.9E-11 9.8E-16 105.6 13.8 116 101-222 82-214 (274)
99 3k6r_A Putative transferase PH 99.3 2.8E-12 9.5E-17 112.7 7.2 102 101-219 124-225 (278)
100 3hnr_A Probable methyltransfer 99.3 2.2E-11 7.6E-16 101.7 12.4 102 101-219 44-145 (220)
101 3g5t_A Trans-aconitate 3-methy 99.3 9.9E-12 3.4E-16 109.2 10.6 107 101-217 35-147 (299)
102 2qm3_A Predicted methyltransfe 99.3 2.4E-11 8E-16 110.8 13.3 105 102-219 172-278 (373)
103 3mgg_A Methyltransferase; NYSG 99.3 5.9E-12 2E-16 109.0 8.8 107 101-219 36-142 (276)
104 2b25_A Hypothetical protein; s 99.3 1.9E-11 6.6E-16 109.4 12.4 122 101-240 104-234 (336)
105 4df3_A Fibrillarin-like rRNA/T 99.3 3.2E-11 1.1E-15 103.3 13.0 137 101-252 76-219 (233)
106 3bus_A REBM, methyltransferase 99.3 1.5E-11 5E-16 106.2 11.1 107 101-219 60-166 (273)
107 3ofk_A Nodulation protein S; N 99.3 6.7E-12 2.3E-16 104.7 8.5 132 101-246 50-184 (216)
108 2gb4_A Thiopurine S-methyltran 99.3 1.2E-11 4.1E-16 107.1 9.7 109 101-216 67-188 (252)
109 3g07_A 7SK snRNA methylphospha 99.3 8.1E-12 2.8E-16 109.9 8.8 112 102-219 46-220 (292)
110 2bm8_A Cephalosporin hydroxyla 99.3 3.8E-12 1.3E-16 109.0 6.3 99 102-219 81-187 (236)
111 1xxl_A YCGJ protein; structura 99.3 4E-11 1.4E-15 102.0 12.5 105 100-218 19-123 (239)
112 3m6w_A RRNA methylase; rRNA me 99.3 3.8E-11 1.3E-15 112.5 13.5 138 101-248 100-254 (464)
113 2xvm_A Tellurite resistance pr 99.3 1.9E-11 6.4E-16 100.2 10.0 104 101-217 31-134 (199)
114 2p7i_A Hypothetical protein; p 99.3 1.2E-11 4.1E-16 104.4 9.0 100 101-219 41-141 (250)
115 2p35_A Trans-aconitate 2-methy 99.3 8.4E-12 2.9E-16 106.7 7.8 101 101-219 32-132 (259)
116 3gu3_A Methyltransferase; alph 99.3 1.1E-11 3.6E-16 108.4 8.6 105 101-219 21-126 (284)
117 1pjz_A Thiopurine S-methyltran 99.3 4.9E-12 1.7E-16 105.5 6.1 107 101-214 21-135 (203)
118 3fzg_A 16S rRNA methylase; met 99.3 1.6E-11 5.6E-16 101.8 9.1 141 101-257 48-194 (200)
119 1i9g_A Hypothetical protein RV 99.3 5.5E-11 1.9E-15 103.2 13.0 127 101-248 98-228 (280)
120 3dli_A Methyltransferase; PSI- 99.3 3.9E-11 1.3E-15 101.9 11.6 100 101-219 40-140 (240)
121 2qy6_A UPF0209 protein YFCK; s 99.3 1.5E-11 5.1E-16 106.9 9.1 114 102-219 60-213 (257)
122 3kr9_A SAM-dependent methyltra 99.2 4.5E-11 1.5E-15 101.9 11.7 106 101-219 14-119 (225)
123 4hc4_A Protein arginine N-meth 99.2 1.7E-11 5.9E-16 111.9 9.7 118 87-217 70-187 (376)
124 3g5l_A Putative S-adenosylmeth 99.2 1.6E-11 5.3E-16 105.0 8.8 103 101-219 43-145 (253)
125 1kpg_A CFA synthase;, cyclopro 99.2 3E-11 1E-15 105.2 10.8 106 101-219 63-168 (287)
126 4fsd_A Arsenic methyltransfera 99.2 3.2E-11 1.1E-15 110.1 11.4 112 101-219 82-203 (383)
127 3tma_A Methyltransferase; thum 99.2 2.5E-11 8.4E-16 109.7 10.4 113 101-219 202-317 (354)
128 3i9f_A Putative type 11 methyl 99.2 1.5E-11 5.2E-16 98.7 7.9 132 101-255 16-153 (170)
129 3axs_A Probable N(2),N(2)-dime 99.2 1.5E-11 5.3E-16 112.8 8.9 104 102-219 52-158 (392)
130 3e8s_A Putative SAM dependent 99.2 4.9E-11 1.7E-15 99.4 11.3 100 101-220 51-153 (227)
131 3ou2_A SAM-dependent methyltra 99.2 2.3E-11 7.7E-16 101.1 9.1 102 101-219 45-146 (218)
132 3id6_C Fibrillarin-like rRNA/T 99.2 5.3E-11 1.8E-15 101.9 11.5 138 101-253 75-219 (232)
133 3ocj_A Putative exported prote 99.2 5.1E-12 1.7E-16 111.6 5.2 110 101-219 117-227 (305)
134 2ipx_A RRNA 2'-O-methyltransfe 99.2 1.9E-11 6.5E-16 103.6 8.5 104 101-219 76-182 (233)
135 2ex4_A Adrenal gland protein A 99.2 1.1E-11 3.7E-16 105.5 7.0 140 102-252 79-227 (241)
136 3r0q_C Probable protein argini 99.2 2.7E-11 9.3E-16 110.5 10.1 107 101-218 62-168 (376)
137 2yx1_A Hypothetical protein MJ 99.2 1.5E-11 5E-16 110.7 8.2 101 101-222 194-294 (336)
138 3lcc_A Putative methyl chlorid 99.2 1.8E-11 6.3E-16 103.5 8.4 135 102-248 66-205 (235)
139 3m70_A Tellurite resistance pr 99.2 2.6E-11 8.8E-16 105.7 9.5 103 102-218 120-222 (286)
140 3q7e_A Protein arginine N-meth 99.2 2.6E-11 8.9E-16 109.5 9.8 108 101-218 65-172 (349)
141 1ixk_A Methyltransferase; open 99.2 9.5E-11 3.3E-15 104.5 13.2 115 101-221 117-248 (315)
142 3pfg_A N-methyltransferase; N, 99.2 3.9E-11 1.3E-15 103.2 10.0 101 101-218 49-150 (263)
143 3gdh_A Trimethylguanosine synt 99.2 2.4E-11 8E-16 103.2 8.5 103 102-218 78-180 (241)
144 2o57_A Putative sarcosine dime 99.2 2.2E-11 7.4E-16 106.6 8.4 107 101-219 81-187 (297)
145 3vc1_A Geranyl diphosphate 2-C 99.2 2.8E-11 9.6E-16 107.1 9.2 106 101-219 116-221 (312)
146 3ujc_A Phosphoethanolamine N-m 99.2 2.5E-11 8.4E-16 103.9 8.6 106 101-219 54-159 (266)
147 2dul_A N(2),N(2)-dimethylguano 99.2 3.8E-11 1.3E-15 109.8 10.0 105 102-219 47-164 (378)
148 3h2b_A SAM-dependent methyltra 99.2 4.9E-11 1.7E-15 98.4 9.7 100 103-219 42-141 (203)
149 1dl5_A Protein-L-isoaspartate 99.2 3.6E-11 1.2E-15 107.0 9.4 103 101-221 74-177 (317)
150 1o9g_A RRNA methyltransferase; 99.2 4.9E-12 1.7E-16 108.5 3.6 112 102-217 51-212 (250)
151 2fk8_A Methoxy mycolic acid sy 99.2 7E-11 2.4E-15 104.5 11.2 106 101-219 89-194 (318)
152 3ccf_A Cyclopropane-fatty-acyl 99.2 6.5E-11 2.2E-15 102.8 10.8 99 101-219 56-154 (279)
153 3bkw_A MLL3908 protein, S-aden 99.2 5.2E-11 1.8E-15 100.6 9.9 103 101-219 42-144 (243)
154 2yqz_A Hypothetical protein TT 99.2 3.3E-11 1.1E-15 103.0 8.4 104 101-219 38-141 (263)
155 2fyt_A Protein arginine N-meth 99.2 7E-11 2.4E-15 106.4 10.8 106 101-216 63-168 (340)
156 3lec_A NADB-rossmann superfami 99.2 1.1E-10 3.9E-15 99.6 11.6 106 101-219 20-125 (230)
157 3dou_A Ribosomal RNA large sub 99.2 3.1E-11 1.1E-15 100.1 7.8 125 101-250 24-164 (191)
158 2p8j_A S-adenosylmethionine-de 99.2 4.8E-11 1.6E-15 98.7 8.9 118 88-219 11-128 (209)
159 3l8d_A Methyltransferase; stru 99.2 5.8E-11 2E-15 100.4 9.5 102 101-219 52-153 (242)
160 2pxx_A Uncharacterized protein 99.2 8.1E-11 2.8E-15 97.3 10.1 110 101-219 41-159 (215)
161 1ri5_A MRNA capping enzyme; me 99.2 2.5E-11 8.6E-16 105.7 7.3 112 101-219 63-174 (298)
162 3g2m_A PCZA361.24; SAM-depende 99.2 2.9E-11 1E-15 106.2 7.8 110 101-220 81-191 (299)
163 3m4x_A NOL1/NOP2/SUN family pr 99.2 1.3E-10 4.4E-15 108.7 12.4 134 101-243 104-254 (456)
164 3m33_A Uncharacterized protein 99.2 3E-11 1E-15 102.0 7.5 93 101-217 47-140 (226)
165 2h00_A Methyltransferase 10 do 99.2 1.5E-11 5E-16 105.5 5.6 80 102-184 65-149 (254)
166 2yxe_A Protein-L-isoaspartate 99.2 7.6E-11 2.6E-15 98.2 9.8 103 101-221 76-179 (215)
167 1r18_A Protein-L-isoaspartate( 99.2 4E-11 1.4E-15 101.2 8.2 108 101-222 83-197 (227)
168 1wy7_A Hypothetical protein PH 99.2 1.1E-09 3.7E-14 90.6 16.6 118 101-241 48-165 (207)
169 3gnl_A Uncharacterized protein 99.2 1.5E-10 5.1E-15 99.7 11.5 106 101-219 20-125 (244)
170 3p2e_A 16S rRNA methylase; met 99.2 1.4E-11 4.7E-16 104.8 4.7 111 101-217 23-137 (225)
171 3sm3_A SAM-dependent methyltra 99.2 7E-11 2.4E-15 99.1 9.0 112 101-219 29-141 (235)
172 2y1w_A Histone-arginine methyl 99.2 1.5E-10 5E-15 104.5 11.7 106 101-218 49-154 (348)
173 3d2l_A SAM-dependent methyltra 99.2 6.2E-11 2.1E-15 100.2 8.7 104 101-219 32-137 (243)
174 1y8c_A S-adenosylmethionine-de 99.2 5.8E-11 2E-15 100.2 8.5 106 101-219 36-142 (246)
175 1g6q_1 HnRNP arginine N-methyl 99.2 1.3E-10 4.3E-15 104.1 10.9 106 102-217 38-143 (328)
176 2pbf_A Protein-L-isoaspartate 99.2 5.5E-11 1.9E-15 100.0 8.0 107 101-220 79-194 (227)
177 1xtp_A LMAJ004091AAA; SGPP, st 99.2 6.4E-11 2.2E-15 100.9 8.5 140 101-253 92-241 (254)
178 2kw5_A SLR1183 protein; struct 99.2 7.7E-11 2.6E-15 97.2 8.6 100 105-219 32-131 (202)
179 1ne2_A Hypothetical protein TA 99.2 4.7E-10 1.6E-14 92.6 13.4 97 100-217 49-145 (200)
180 1jg1_A PIMT;, protein-L-isoasp 99.2 1E-10 3.6E-15 99.2 9.6 103 101-222 90-192 (235)
181 1vbf_A 231AA long hypothetical 99.2 1.4E-10 4.7E-15 97.7 10.2 99 101-221 69-167 (231)
182 3thr_A Glycine N-methyltransfe 99.2 5.1E-11 1.7E-15 103.9 7.6 115 101-219 56-175 (293)
183 2pjd_A Ribosomal RNA small sub 99.1 3.2E-11 1.1E-15 108.6 6.2 107 102-219 196-303 (343)
184 3q87_B N6 adenine specific DNA 99.1 2.1E-10 7.1E-15 92.9 10.5 121 101-247 22-146 (170)
185 1wzn_A SAM-dependent methyltra 99.1 9.7E-11 3.3E-15 99.8 9.0 106 101-219 40-145 (252)
186 2frx_A Hypothetical protein YE 99.1 3.3E-10 1.1E-14 106.6 13.0 115 102-221 117-248 (479)
187 3ggd_A SAM-dependent methyltra 99.1 6.9E-11 2.4E-15 100.5 7.6 104 101-218 55-162 (245)
188 3e23_A Uncharacterized protein 99.1 7E-11 2.4E-15 98.2 7.5 130 101-249 42-181 (211)
189 2gs9_A Hypothetical protein TT 99.1 1.5E-10 5.3E-15 96.0 9.5 98 101-219 35-132 (211)
190 1i1n_A Protein-L-isoaspartate 99.1 1.8E-10 6E-15 96.8 9.9 107 101-221 76-184 (226)
191 3cgg_A SAM-dependent methyltra 99.1 2E-10 6.8E-15 93.2 9.8 126 101-247 45-172 (195)
192 1ej0_A FTSJ; methyltransferase 99.1 6.2E-11 2.1E-15 94.5 6.5 127 101-249 21-160 (180)
193 3bgv_A MRNA CAP guanine-N7 met 99.1 7.3E-11 2.5E-15 104.4 7.6 114 101-219 33-155 (313)
194 2vdw_A Vaccinia virus capping 99.1 1.4E-10 4.7E-15 102.9 8.9 114 101-219 47-169 (302)
195 2plw_A Ribosomal RNA methyltra 99.1 5.5E-11 1.9E-15 98.0 5.9 126 101-249 21-178 (201)
196 3uwp_A Histone-lysine N-methyl 99.1 4E-10 1.4E-14 103.7 11.0 110 101-218 172-287 (438)
197 3bxo_A N,N-dimethyltransferase 99.1 1.9E-10 6.4E-15 96.9 8.2 101 101-219 39-141 (239)
198 2yxl_A PH0851 protein, 450AA l 99.1 6.9E-10 2.4E-14 103.5 12.7 116 101-221 258-391 (450)
199 3mq2_A 16S rRNA methyltransfer 99.1 2.6E-10 8.9E-15 95.3 8.7 110 101-219 26-140 (218)
200 1u2z_A Histone-lysine N-methyl 99.1 4.4E-10 1.5E-14 104.4 10.9 108 101-218 241-358 (433)
201 3cc8_A Putative methyltransfer 99.1 2.8E-10 9.5E-15 94.9 8.4 99 101-219 31-130 (230)
202 3dp7_A SAM-dependent methyltra 99.1 2.4E-10 8.2E-15 103.5 8.6 109 101-218 178-286 (363)
203 2nyu_A Putative ribosomal RNA 99.1 1.6E-10 5.4E-15 94.7 6.7 124 101-249 21-169 (196)
204 2qe6_A Uncharacterized protein 99.1 6.7E-10 2.3E-14 97.0 10.9 108 102-220 77-197 (274)
205 3bt7_A TRNA (uracil-5-)-methyl 99.1 2.5E-09 8.4E-14 97.2 14.9 99 102-219 213-326 (369)
206 2aot_A HMT, histamine N-methyl 99.1 3.7E-10 1.3E-14 99.0 8.9 110 102-219 52-172 (292)
207 3gwz_A MMCR; methyltransferase 99.1 7.6E-10 2.6E-14 100.4 11.2 106 101-218 201-306 (369)
208 1sqg_A SUN protein, FMU protei 99.0 1.6E-09 5.4E-14 100.4 12.9 115 101-221 245-376 (429)
209 3ege_A Putative methyltransfer 99.0 2.3E-10 7.8E-15 98.6 6.8 97 101-218 33-129 (261)
210 2jjq_A Uncharacterized RNA met 99.0 8.2E-10 2.8E-14 102.4 10.9 99 101-219 289-387 (425)
211 3tm4_A TRNA (guanine N2-)-meth 99.0 1.2E-09 4.2E-14 99.5 11.8 112 100-217 215-328 (373)
212 3mcz_A O-methyltransferase; ad 99.0 3E-10 1E-14 102.0 7.5 107 103-218 180-286 (352)
213 3i53_A O-methyltransferase; CO 99.0 5E-10 1.7E-14 99.9 8.8 106 102-219 169-274 (332)
214 3cvo_A Methyltransferase-like 99.0 1.1E-09 3.7E-14 91.8 10.2 100 102-218 30-153 (202)
215 3bkx_A SAM-dependent methyltra 99.0 6.4E-10 2.2E-14 95.9 9.0 109 101-219 42-159 (275)
216 3bzb_A Uncharacterized protein 99.0 1.2E-09 4.2E-14 95.5 10.8 110 101-219 78-205 (281)
217 1qzz_A RDMB, aclacinomycin-10- 99.0 8.9E-10 3.1E-14 99.5 10.2 107 101-219 181-287 (374)
218 3b3j_A Histone-arginine methyl 99.0 2.7E-10 9.3E-15 107.2 6.8 106 101-218 157-262 (480)
219 2avn_A Ubiquinone/menaquinone 99.0 9.2E-10 3.2E-14 94.6 9.6 99 101-219 53-152 (260)
220 2i62_A Nicotinamide N-methyltr 99.0 9.7E-11 3.3E-15 100.2 2.8 114 101-219 55-198 (265)
221 1uwv_A 23S rRNA (uracil-5-)-me 99.0 3.8E-09 1.3E-13 98.1 13.5 102 101-219 285-389 (433)
222 1x19_A CRTF-related protein; m 99.0 2.3E-09 8E-14 96.6 11.6 106 101-218 189-294 (359)
223 3iv6_A Putative Zn-dependent a 99.0 9.9E-10 3.4E-14 95.5 8.7 105 101-220 44-149 (261)
224 1p91_A Ribosomal RNA large sub 99.0 9.2E-10 3.2E-14 94.8 8.3 95 101-219 84-178 (269)
225 2f8l_A Hypothetical protein LM 99.0 6.9E-10 2.4E-14 99.8 7.6 131 102-242 130-277 (344)
226 1tw3_A COMT, carminomycin 4-O- 99.0 8.5E-10 2.9E-14 99.3 8.2 106 101-218 182-287 (360)
227 2ip2_A Probable phenazine-spec 99.0 5.9E-10 2E-14 99.3 6.8 102 104-218 169-271 (334)
228 2a14_A Indolethylamine N-methy 99.0 6.8E-11 2.3E-15 102.3 0.6 114 102-219 55-197 (263)
229 2wa2_A Non-structural protein 99.0 1.9E-10 6.4E-15 100.9 3.3 133 101-248 81-218 (276)
230 2r3s_A Uncharacterized protein 99.0 5.9E-10 2E-14 99.1 6.6 106 101-218 164-270 (335)
231 3hp7_A Hemolysin, putative; st 99.0 1.4E-09 4.6E-14 96.1 8.8 99 100-218 83-184 (291)
232 3sso_A Methyltransferase; macr 98.9 1.2E-09 4.2E-14 100.2 7.8 98 100-218 214-323 (419)
233 2p41_A Type II methyltransfera 98.9 1E-09 3.5E-14 97.5 7.0 129 101-247 81-215 (305)
234 1vlm_A SAM-dependent methyltra 98.9 1.7E-09 5.9E-14 90.5 7.8 92 103-219 48-139 (219)
235 2b9e_A NOL1/NOP2/SUN domain fa 98.9 2.2E-08 7.4E-13 89.1 15.3 115 101-221 101-236 (309)
236 2ih2_A Modification methylase 98.9 6.9E-10 2.4E-14 101.8 5.7 123 101-241 38-184 (421)
237 3htx_A HEN1; HEN1, small RNA m 98.9 4.6E-09 1.6E-13 103.6 11.3 108 101-218 720-833 (950)
238 2oxt_A Nucleoside-2'-O-methylt 98.9 3.1E-10 1E-14 98.9 2.5 134 101-249 73-211 (265)
239 3lcv_B Sisomicin-gentamicin re 98.9 2.8E-09 9.7E-14 92.3 7.9 141 101-257 131-278 (281)
240 2g72_A Phenylethanolamine N-me 98.9 1.4E-10 4.8E-15 101.3 -0.8 112 102-218 71-214 (289)
241 3giw_A Protein of unknown func 98.9 1.2E-08 4.2E-13 89.1 11.3 128 102-239 78-218 (277)
242 4a6d_A Hydroxyindole O-methylt 98.8 7.7E-09 2.6E-13 93.4 9.0 103 102-218 179-282 (353)
243 3lst_A CALO1 methyltransferase 98.8 8.7E-09 3E-13 92.6 9.2 103 101-218 183-285 (348)
244 3opn_A Putative hemolysin; str 98.8 3.8E-09 1.3E-13 90.1 6.1 99 100-218 35-136 (232)
245 2xyq_A Putative 2'-O-methyl tr 98.8 8.7E-09 3E-13 90.9 8.4 120 101-248 62-195 (290)
246 4e2x_A TCAB9; kijanose, tetron 98.8 2.2E-09 7.6E-14 98.5 4.7 103 101-219 106-208 (416)
247 2r6z_A UPF0341 protein in RSP 98.8 3.4E-09 1.2E-13 91.9 5.4 79 102-185 83-171 (258)
248 3frh_A 16S rRNA methylase; met 98.8 7.7E-09 2.6E-13 88.7 7.2 141 101-257 104-248 (253)
249 3ll7_A Putative methyltransfer 98.8 4.2E-09 1.4E-13 97.1 5.7 79 102-184 93-172 (410)
250 1zq9_A Probable dimethyladenos 98.8 1.5E-08 5.2E-13 88.9 8.8 76 101-184 27-102 (285)
251 3k0b_A Predicted N6-adenine-sp 98.8 4.3E-08 1.5E-12 90.0 11.9 111 101-219 200-350 (393)
252 2okc_A Type I restriction enzy 98.8 6.3E-09 2.2E-13 96.8 6.3 113 102-219 171-307 (445)
253 1m6y_A S-adenosyl-methyltransf 98.8 3.3E-08 1.1E-12 87.6 10.2 79 101-184 25-107 (301)
254 4azs_A Methyltransferase WBDD; 98.8 2.2E-08 7.4E-13 96.0 9.7 77 101-183 65-142 (569)
255 3gru_A Dimethyladenosine trans 98.7 2.2E-08 7.4E-13 88.6 8.3 75 101-184 49-123 (295)
256 1fp1_D Isoliquiritigenin 2'-O- 98.7 7.2E-09 2.4E-13 94.0 5.2 98 101-218 208-305 (372)
257 3ldg_A Putative uncharacterize 98.7 3.1E-08 1.1E-12 90.6 9.4 111 101-219 193-343 (384)
258 3tqs_A Ribosomal RNA small sub 98.7 3.2E-08 1.1E-12 85.7 9.0 75 101-184 28-105 (255)
259 3vyw_A MNMC2; tRNA wobble urid 98.7 4.9E-08 1.7E-12 86.5 10.1 124 103-241 97-238 (308)
260 3reo_A (ISO)eugenol O-methyltr 98.7 1.6E-08 5.5E-13 91.7 7.1 97 102-218 203-299 (368)
261 3khk_A Type I restriction-modi 98.7 1.8E-08 6.2E-13 96.1 7.7 151 100-255 242-431 (544)
262 3ldu_A Putative methylase; str 98.7 1.5E-08 5E-13 92.8 6.6 111 101-219 194-344 (385)
263 1af7_A Chemotaxis receptor met 98.7 2.9E-08 9.9E-13 86.8 7.9 113 102-219 105-252 (274)
264 1fp2_A Isoflavone O-methyltran 98.7 1.4E-08 4.7E-13 91.3 6.0 98 101-218 187-287 (352)
265 3p9c_A Caffeic acid O-methyltr 98.7 2.2E-08 7.5E-13 90.7 7.3 97 102-218 201-297 (364)
266 1qam_A ERMC' methyltransferase 98.7 9.8E-08 3.4E-12 81.8 10.7 75 101-184 29-103 (244)
267 2oo3_A Protein involved in cat 98.7 5.4E-08 1.8E-12 85.1 8.9 122 102-242 91-217 (283)
268 2oyr_A UPF0341 protein YHIQ; a 98.7 2.3E-08 7.9E-13 86.7 6.5 81 104-186 90-175 (258)
269 3lkd_A Type I restriction-modi 98.7 1.3E-07 4.4E-12 90.2 12.1 150 102-255 221-393 (542)
270 2zfu_A Nucleomethylin, cerebra 98.7 2.2E-08 7.5E-13 83.2 5.9 109 101-246 66-175 (215)
271 3fut_A Dimethyladenosine trans 98.7 4.1E-08 1.4E-12 85.8 7.4 73 102-184 47-119 (271)
272 2ar0_A M.ecoki, type I restric 98.6 3.7E-08 1.3E-12 93.9 7.3 153 102-256 169-348 (541)
273 2h1r_A Dimethyladenosine trans 98.6 2.5E-08 8.6E-13 88.1 5.4 75 101-184 41-115 (299)
274 4fzv_A Putative methyltransfer 98.6 5.2E-07 1.8E-11 81.7 13.7 135 102-237 148-302 (359)
275 3s1s_A Restriction endonucleas 98.6 1.1E-07 3.8E-12 93.6 9.3 148 102-252 321-498 (878)
276 3ftd_A Dimethyladenosine trans 98.6 4.6E-07 1.6E-11 78.0 11.4 74 101-184 30-104 (249)
277 2wk1_A NOVP; transferase, O-me 98.5 2.1E-07 7.3E-12 81.6 8.8 109 100-219 104-244 (282)
278 1zg3_A Isoflavanone 4'-O-methy 98.5 6E-08 2E-12 87.3 5.2 97 102-218 193-292 (358)
279 3v97_A Ribosomal RNA large sub 98.5 9.1E-07 3.1E-11 86.8 12.0 113 101-219 189-347 (703)
280 3evf_A RNA-directed RNA polyme 98.5 2.5E-07 8.7E-12 80.4 7.0 136 101-249 73-210 (277)
281 3ua3_A Protein arginine N-meth 98.4 5.8E-07 2E-11 87.3 9.7 106 103-217 410-532 (745)
282 2ld4_A Anamorsin; methyltransf 98.4 1.8E-07 6.1E-12 75.3 4.8 88 101-218 11-100 (176)
283 3uzu_A Ribosomal RNA small sub 98.4 5E-07 1.7E-11 79.2 7.2 76 101-184 41-123 (279)
284 4gqb_A Protein arginine N-meth 98.4 4.8E-07 1.6E-11 87.5 7.3 104 103-217 358-465 (637)
285 1qyr_A KSGA, high level kasuga 98.4 3.3E-07 1.1E-11 79.1 5.4 74 101-184 20-99 (252)
286 3r24_A NSP16, 2'-O-methyl tran 98.3 2.8E-06 9.7E-11 74.3 9.7 137 87-250 92-241 (344)
287 3gcz_A Polyprotein; flavivirus 98.3 2E-07 6.8E-12 81.2 2.2 136 102-250 90-228 (282)
288 1yub_A Ermam, rRNA methyltrans 98.3 5.1E-08 1.8E-12 83.3 -2.3 75 101-184 28-102 (245)
289 3eld_A Methyltransferase; flav 98.2 2.3E-06 8E-11 75.0 7.3 136 101-249 80-217 (300)
290 3ps9_A TRNA 5-methylaminomethy 98.2 4.4E-06 1.5E-10 81.3 8.8 113 103-219 67-219 (676)
291 3pvc_A TRNA 5-methylaminomethy 98.1 5.7E-06 2E-10 80.8 8.5 114 102-219 58-211 (689)
292 1wg8_A Predicted S-adenosylmet 98.1 1.5E-05 5E-10 69.7 9.7 73 102-184 22-98 (285)
293 2px2_A Genome polyprotein [con 98.0 8.3E-06 2.9E-10 70.1 7.1 130 101-247 72-207 (269)
294 3p8z_A Mtase, non-structural p 97.9 8.9E-05 3E-09 63.0 10.5 132 102-248 78-211 (267)
295 3ufb_A Type I restriction-modi 97.7 6.4E-05 2.2E-09 71.4 7.6 148 102-255 217-397 (530)
296 1i4w_A Mitochondrial replicati 97.6 8.1E-05 2.8E-09 67.2 6.1 59 103-168 59-117 (353)
297 3lkz_A Non-structural protein 97.6 9.3E-05 3.2E-09 64.8 6.1 133 102-248 94-229 (321)
298 1g55_A DNA cytosine methyltran 97.5 0.00035 1.2E-08 62.6 9.8 124 103-241 2-139 (343)
299 3tka_A Ribosomal RNA small sub 97.5 0.00014 4.7E-09 65.0 6.9 75 102-184 57-137 (347)
300 2k4m_A TR8_protein, UPF0146 pr 97.4 9.6E-05 3.3E-09 58.4 3.4 64 101-184 34-99 (153)
301 2efj_A 3,7-dimethylxanthine me 97.4 0.0012 4.1E-08 60.1 11.0 112 103-221 53-227 (384)
302 2c7p_A Modification methylase 97.3 0.0026 8.7E-08 56.7 12.1 124 103-241 11-143 (327)
303 4auk_A Ribosomal RNA large sub 97.3 0.00036 1.2E-08 63.2 6.3 71 101-185 210-280 (375)
304 2zig_A TTHA0409, putative modi 97.1 0.0016 5.3E-08 57.0 8.1 46 101-148 234-279 (297)
305 3g7u_A Cytosine-specific methy 97.0 0.002 7E-08 58.4 9.0 124 104-241 3-141 (376)
306 3tos_A CALS11; methyltransfera 96.9 0.014 4.8E-07 50.1 12.7 136 101-250 68-246 (257)
307 3b5i_A S-adenosyl-L-methionine 96.9 0.0016 5.3E-08 59.2 6.5 118 101-219 51-225 (374)
308 1m6e_X S-adenosyl-L-methionnin 96.7 0.0017 5.7E-08 58.6 5.4 115 101-219 50-209 (359)
309 3s2e_A Zinc-containing alcohol 96.5 0.0037 1.3E-07 55.3 6.3 98 101-219 165-263 (340)
310 1f8f_A Benzyl alcohol dehydrog 96.4 0.0062 2.1E-07 54.5 7.2 98 101-218 189-288 (371)
311 3m6i_A L-arabinitol 4-dehydrog 96.4 0.021 7.3E-07 50.8 10.7 98 101-219 178-283 (363)
312 3ubt_Y Modification methylase 96.4 0.023 7.8E-07 49.9 10.5 123 105-241 2-133 (331)
313 4h0n_A DNMT2; SAH binding, tra 96.3 0.042 1.4E-06 48.8 11.9 123 104-241 4-139 (333)
314 1pl8_A Human sorbitol dehydrog 96.3 0.036 1.2E-06 49.2 11.3 95 101-218 170-272 (356)
315 3me5_A Cytosine-specific methy 96.2 0.044 1.5E-06 51.3 11.8 129 103-241 88-250 (482)
316 3fpc_A NADP-dependent alcohol 96.1 0.0077 2.6E-07 53.5 6.3 98 101-218 165-265 (352)
317 4ej6_A Putative zinc-binding d 96.1 0.02 6.9E-07 51.3 9.1 99 101-219 181-284 (370)
318 1g60_A Adenine-specific methyl 96.1 0.011 3.9E-07 50.4 6.8 47 100-148 210-256 (260)
319 1uuf_A YAHK, zinc-type alcohol 96.0 0.042 1.4E-06 49.2 10.5 94 101-218 193-287 (369)
320 1g60_A Adenine-specific methyl 96.0 0.0066 2.3E-07 51.9 4.8 62 157-219 4-74 (260)
321 3jv7_A ADH-A; dehydrogenase, n 95.9 0.018 6.3E-07 50.8 7.4 98 101-219 170-270 (345)
322 1boo_A Protein (N-4 cytosine-s 95.8 0.0091 3.1E-07 52.8 5.2 67 154-221 11-86 (323)
323 3qv2_A 5-cytosine DNA methyltr 95.8 0.056 1.9E-06 48.0 10.0 137 102-253 9-162 (327)
324 4eez_A Alcohol dehydrogenase 1 95.7 0.05 1.7E-06 47.8 9.4 99 101-219 162-263 (348)
325 2dph_A Formaldehyde dismutase; 95.6 0.02 6.8E-07 51.8 6.7 109 101-218 184-298 (398)
326 3uko_A Alcohol dehydrogenase c 95.6 0.023 7.8E-07 51.0 7.0 99 101-219 192-295 (378)
327 1e3j_A NADP(H)-dependent ketos 95.5 0.069 2.4E-06 47.2 9.8 97 101-218 167-270 (352)
328 2zig_A TTHA0409, putative modi 95.5 0.016 5.4E-07 50.5 5.5 67 153-220 17-98 (297)
329 1kol_A Formaldehyde dehydrogen 95.4 0.041 1.4E-06 49.6 8.0 108 101-218 184-299 (398)
330 2b5w_A Glucose dehydrogenase; 95.4 0.02 7E-07 50.9 5.9 94 104-219 174-273 (357)
331 1p0f_A NADP-dependent alcohol 95.4 0.054 1.9E-06 48.3 8.7 99 101-219 190-293 (373)
332 3two_A Mannitol dehydrogenase; 95.4 0.041 1.4E-06 48.6 7.8 90 101-219 175-265 (348)
333 1eg2_A Modification methylase 95.3 0.013 4.3E-07 51.9 4.3 67 155-222 36-109 (319)
334 1cdo_A Alcohol dehydrogenase; 95.3 0.099 3.4E-06 46.6 10.1 98 102-219 192-294 (374)
335 3uog_A Alcohol dehydrogenase; 95.2 0.11 3.7E-06 46.3 10.1 94 101-219 188-287 (363)
336 1e3i_A Alcohol dehydrogenase, 95.2 0.047 1.6E-06 48.8 7.6 97 102-218 195-296 (376)
337 2jhf_A Alcohol dehydrogenase E 95.1 0.14 4.7E-06 45.7 10.4 98 101-218 190-292 (374)
338 2fzw_A Alcohol dehydrogenase c 95.1 0.12 4E-06 46.0 9.9 98 102-219 190-292 (373)
339 1piw_A Hypothetical zinc-type 95.1 0.067 2.3E-06 47.5 8.2 94 101-218 178-275 (360)
340 3fwz_A Inner membrane protein 95.1 0.11 3.8E-06 39.6 8.5 94 103-219 7-105 (140)
341 1pqw_A Polyketide synthase; ro 95.0 0.032 1.1E-06 44.9 5.4 96 101-218 37-136 (198)
342 4b7c_A Probable oxidoreductase 94.9 0.058 2E-06 47.3 7.3 97 101-218 148-247 (336)
343 4a2c_A Galactitol-1-phosphate 94.9 0.15 5.1E-06 44.7 9.9 99 101-219 159-260 (346)
344 1pjc_A Protein (L-alanine dehy 94.9 0.16 5.4E-06 45.4 10.2 96 102-217 166-265 (361)
345 2d8a_A PH0655, probable L-thre 94.9 0.031 1.1E-06 49.4 5.4 97 102-218 167-266 (348)
346 4dvj_A Putative zinc-dependent 94.8 0.084 2.9E-06 47.1 8.2 96 102-218 171-269 (363)
347 3ggo_A Prephenate dehydrogenas 94.8 0.39 1.3E-05 42.0 12.3 92 102-217 32-126 (314)
348 3ip1_A Alcohol dehydrogenase, 94.8 0.075 2.6E-06 48.0 7.8 103 102-219 213-318 (404)
349 2cf5_A Atccad5, CAD, cinnamyl 94.8 0.11 3.9E-06 45.9 8.9 94 102-218 180-274 (357)
350 1vj0_A Alcohol dehydrogenase, 94.7 0.04 1.4E-06 49.4 5.8 96 101-219 194-298 (380)
351 1rjw_A ADH-HT, alcohol dehydro 94.6 0.043 1.5E-06 48.4 5.6 97 101-218 163-260 (339)
352 2qrv_A DNA (cytosine-5)-methyl 94.6 0.057 1.9E-06 47.2 6.2 74 101-184 14-92 (295)
353 1yqd_A Sinapyl alcohol dehydro 94.5 0.17 5.7E-06 45.1 9.2 94 102-218 187-281 (366)
354 4dio_A NAD(P) transhydrogenase 94.3 0.12 4.2E-06 47.1 7.9 106 102-216 189-309 (405)
355 4a7p_A UDP-glucose dehydrogena 94.3 0.41 1.4E-05 44.2 11.6 140 102-255 7-160 (446)
356 2h6e_A ADH-4, D-arabinose 1-de 94.3 0.053 1.8E-06 47.8 5.4 93 102-218 170-268 (344)
357 2dq4_A L-threonine 3-dehydroge 94.2 0.029 1E-06 49.5 3.5 96 102-218 164-261 (343)
358 3goh_A Alcohol dehydrogenase, 94.0 0.062 2.1E-06 46.7 5.3 87 101-218 141-228 (315)
359 1v3u_A Leukotriene B4 12- hydr 94.0 0.16 5.4E-06 44.4 8.1 96 101-218 144-243 (333)
360 2hcy_A Alcohol dehydrogenase 1 93.8 0.14 4.8E-06 45.1 7.3 97 101-218 168-268 (347)
361 3fbg_A Putative arginate lyase 93.8 0.16 5.6E-06 44.7 7.7 95 102-218 150-247 (346)
362 3swr_A DNA (cytosine-5)-methyl 93.8 0.93 3.2E-05 46.0 13.9 140 103-255 540-706 (1002)
363 3jyn_A Quinone oxidoreductase; 93.8 0.079 2.7E-06 46.3 5.5 97 101-219 139-239 (325)
364 2eez_A Alanine dehydrogenase; 93.7 0.4 1.4E-05 42.8 10.2 96 102-217 165-264 (369)
365 1jvb_A NAD(H)-dependent alcoho 93.6 0.094 3.2E-06 46.2 5.8 97 101-218 169-270 (347)
366 1iz0_A Quinone oxidoreductase; 93.6 0.26 8.8E-06 42.4 8.5 91 101-218 124-217 (302)
367 3qwb_A Probable quinone oxidor 93.6 0.074 2.5E-06 46.6 5.1 96 101-218 147-246 (334)
368 4eye_A Probable oxidoreductase 93.6 0.14 4.9E-06 45.0 7.0 95 101-218 158-256 (342)
369 3gms_A Putative NADPH:quinone 93.6 0.078 2.7E-06 46.6 5.2 97 101-219 143-243 (340)
370 2cdc_A Glucose dehydrogenase g 93.5 0.09 3.1E-06 46.8 5.5 93 103-219 181-278 (366)
371 2j3h_A NADP-dependent oxidored 93.5 0.41 1.4E-05 41.9 9.8 96 102-218 155-254 (345)
372 3l9w_A Glutathione-regulated p 93.4 0.23 8E-06 45.3 8.2 94 103-219 4-102 (413)
373 2py6_A Methyltransferase FKBM; 93.4 0.16 5.5E-06 46.2 7.0 48 101-148 225-274 (409)
374 3llv_A Exopolyphosphatase-rela 93.4 0.51 1.7E-05 35.5 8.9 69 103-184 6-79 (141)
375 1boo_A Protein (N-4 cytosine-s 93.3 0.079 2.7E-06 46.7 4.8 64 100-170 250-313 (323)
376 3p2y_A Alanine dehydrogenase/p 93.3 0.25 8.6E-06 44.7 8.1 106 102-216 183-299 (381)
377 2c0c_A Zinc binding alcohol de 93.2 0.15 5.2E-06 45.3 6.5 97 101-219 162-261 (362)
378 2g1u_A Hypothetical protein TM 93.1 0.27 9.3E-06 37.9 7.2 98 101-220 17-119 (155)
379 1wly_A CAAR, 2-haloacrylate re 93.1 0.19 6.4E-06 44.0 6.8 96 102-219 145-244 (333)
380 2y0c_A BCEC, UDP-glucose dehyd 92.9 0.93 3.2E-05 42.1 11.6 111 101-219 6-128 (478)
381 3gg2_A Sugar dehydrogenase, UD 92.9 0.96 3.3E-05 41.6 11.6 108 104-219 3-122 (450)
382 2zb4_A Prostaglandin reductase 92.8 0.16 5.6E-06 44.8 6.1 95 104-218 162-259 (357)
383 3k96_A Glycerol-3-phosphate de 92.8 0.8 2.7E-05 40.8 10.6 131 102-255 28-164 (356)
384 2eih_A Alcohol dehydrogenase; 92.7 0.19 6.6E-06 44.1 6.3 95 102-218 166-264 (343)
385 4ft4_B DNA (cytosine-5)-methyl 92.5 1.1 3.8E-05 43.9 12.2 45 103-147 212-261 (784)
386 4dup_A Quinone oxidoreductase; 92.3 0.15 5.1E-06 45.1 5.1 96 101-218 166-264 (353)
387 2vhw_A Alanine dehydrogenase; 92.2 0.85 2.9E-05 40.9 10.1 96 102-217 167-266 (377)
388 1qor_A Quinone oxidoreductase; 92.1 0.16 5.5E-06 44.2 5.1 96 102-219 140-239 (327)
389 3gaz_A Alcohol dehydrogenase s 91.9 0.33 1.1E-05 42.6 6.9 93 101-218 149-245 (343)
390 3av4_A DNA (cytosine-5)-methyl 91.7 3.3 0.00011 43.3 14.8 140 103-255 851-1017(1330)
391 2j8z_A Quinone oxidoreductase; 91.6 0.18 6.2E-06 44.6 4.8 96 102-219 162-261 (354)
392 1yb5_A Quinone oxidoreductase; 91.5 0.29 9.8E-06 43.3 6.0 96 101-218 169-268 (351)
393 1zud_1 Adenylyltransferase THI 91.4 0.53 1.8E-05 39.8 7.3 35 102-136 27-62 (251)
394 2o3j_A UDP-glucose 6-dehydroge 91.3 2.7 9.1E-05 38.9 12.7 110 104-219 10-135 (481)
395 1zcj_A Peroxisomal bifunctiona 91.3 1.6 5.6E-05 40.1 11.1 101 104-220 38-151 (463)
396 3dfz_A SIRC, precorrin-2 dehyd 91.2 0.35 1.2E-05 40.5 5.9 80 90-185 18-101 (223)
397 2g5c_A Prephenate dehydrogenas 91.1 1.9 6.4E-05 36.4 10.7 90 104-217 2-94 (281)
398 3c85_A Putative glutathione-re 90.9 1.1 3.9E-05 35.2 8.5 95 103-219 39-139 (183)
399 2vn8_A Reticulon-4-interacting 90.9 0.67 2.3E-05 41.2 7.9 95 102-218 183-279 (375)
400 2hwk_A Helicase NSP2; rossman 90.9 0.2 6.8E-06 43.5 4.1 71 174-250 205-281 (320)
401 3iht_A S-adenosyl-L-methionine 90.7 0.73 2.5E-05 36.5 6.8 105 99-217 37-145 (174)
402 1x13_A NAD(P) transhydrogenase 90.6 0.7 2.4E-05 41.9 7.8 42 102-144 171-213 (401)
403 3gqv_A Enoyl reductase; medium 90.6 0.79 2.7E-05 40.7 8.1 96 101-218 163-262 (371)
404 1l7d_A Nicotinamide nucleotide 90.5 0.71 2.4E-05 41.4 7.7 42 102-144 171-213 (384)
405 3ic5_A Putative saccharopine d 89.7 1.5 5.1E-05 31.2 7.7 69 103-183 5-77 (118)
406 4a0s_A Octenoyl-COA reductase/ 89.6 0.73 2.5E-05 41.9 7.2 44 101-145 219-264 (447)
407 3qsg_A NAD-binding phosphogluc 89.6 8.3 0.00029 33.2 13.7 112 102-245 23-138 (312)
408 3ado_A Lambda-crystallin; L-gu 89.6 2.3 7.7E-05 37.4 10.0 105 101-220 4-124 (319)
409 1jw9_B Molybdopterin biosynthe 89.4 0.39 1.3E-05 40.5 4.8 34 102-136 30-65 (249)
410 3hwr_A 2-dehydropantoate 2-red 89.4 2.6 8.9E-05 36.5 10.3 98 102-218 18-119 (318)
411 1bg6_A N-(1-D-carboxylethyl)-L 89.4 2.1 7E-05 37.3 9.7 98 104-217 5-107 (359)
412 3oig_A Enoyl-[acyl-carrier-pro 89.2 5.5 0.00019 33.0 11.9 78 101-184 5-96 (266)
413 3tum_A Shikimate dehydrogenase 89.2 7.7 0.00026 33.0 12.9 102 70-185 92-197 (269)
414 1f0y_A HCDH, L-3-hydroxyacyl-C 89.1 2.6 9E-05 36.0 10.1 102 103-219 15-136 (302)
415 1eg2_A Modification methylase 89.1 0.98 3.3E-05 39.6 7.3 46 100-147 240-288 (319)
416 3o26_A Salutaridine reductase; 89.0 0.87 3E-05 38.6 6.8 77 102-184 11-100 (311)
417 4a27_A Synaptic vesicle membra 89.0 0.62 2.1E-05 40.9 6.0 95 101-219 141-238 (349)
418 3ijr_A Oxidoreductase, short c 89.0 6.9 0.00024 33.1 12.6 76 102-184 46-134 (291)
419 2q3e_A UDP-glucose 6-dehydroge 88.9 7.1 0.00024 35.8 13.4 108 104-217 6-129 (467)
420 1xa0_A Putative NADPH dependen 88.7 0.46 1.6E-05 41.2 4.9 91 105-218 152-245 (328)
421 1zej_A HBD-9, 3-hydroxyacyl-CO 88.7 1.5 5.2E-05 38.0 8.1 97 101-220 10-108 (293)
422 4g65_A TRK system potassium up 88.7 5.5 0.00019 36.6 12.4 73 101-184 233-309 (461)
423 3oj0_A Glutr, glutamyl-tRNA re 88.4 3.8 0.00013 30.7 9.5 67 102-185 20-90 (144)
424 3gt0_A Pyrroline-5-carboxylate 88.4 1.8 6.1E-05 36.0 8.2 90 104-218 3-96 (247)
425 3h8v_A Ubiquitin-like modifier 88.3 0.64 2.2E-05 40.4 5.5 34 102-136 35-70 (292)
426 3i1j_A Oxidoreductase, short c 88.3 4.2 0.00014 33.2 10.4 77 102-184 13-103 (247)
427 3nx4_A Putative oxidoreductase 88.3 0.63 2.2E-05 40.2 5.5 89 105-218 149-240 (324)
428 3h7a_A Short chain dehydrogena 88.2 2.2 7.4E-05 35.5 8.7 76 101-184 5-92 (252)
429 2gn4_A FLAA1 protein, UDP-GLCN 88.2 2.3 7.8E-05 37.1 9.1 76 102-185 20-101 (344)
430 3f1l_A Uncharacterized oxidore 88.1 5.7 0.0002 32.7 11.2 77 102-184 11-101 (252)
431 3vku_A L-LDH, L-lactate dehydr 87.9 7.5 0.00026 34.1 12.2 112 99-219 5-125 (326)
432 3d0o_A L-LDH 1, L-lactate dehy 87.8 13 0.00044 32.2 14.0 109 102-218 5-122 (317)
433 3rui_A Ubiquitin-like modifier 87.7 0.97 3.3E-05 40.2 6.3 34 102-136 33-68 (340)
434 3tqh_A Quinone oxidoreductase; 87.6 1.9 6.5E-05 37.2 8.1 91 101-218 151-244 (321)
435 4e12_A Diketoreductase; oxidor 87.5 2.1 7E-05 36.5 8.2 103 103-220 4-122 (283)
436 2vz8_A Fatty acid synthase; tr 87.5 0.097 3.3E-06 58.0 -0.4 99 105-217 1243-1346(2512)
437 1y8q_A Ubiquitin-like 1 activa 87.3 0.67 2.3E-05 41.2 5.1 52 85-136 16-70 (346)
438 3i83_A 2-dehydropantoate 2-red 87.3 3.5 0.00012 35.6 9.7 94 104-217 3-103 (320)
439 3vh1_A Ubiquitin-like modifier 86.9 1 3.4E-05 43.1 6.3 33 103-135 327-360 (598)
440 3b1f_A Putative prephenate deh 86.9 2.2 7.6E-05 36.1 8.0 90 103-216 6-98 (290)
441 3ioy_A Short-chain dehydrogena 86.8 3.2 0.00011 35.9 9.2 78 102-184 7-96 (319)
442 3o8q_A Shikimate 5-dehydrogena 86.7 8.8 0.0003 32.8 11.8 96 75-185 100-197 (281)
443 3krt_A Crotonyl COA reductase; 86.5 1.5 5.3E-05 40.0 7.3 102 102-218 228-343 (456)
444 1id1_A Putative potassium chan 86.4 2.8 9.4E-05 31.9 7.7 98 103-220 3-106 (153)
445 3qiv_A Short-chain dehydrogena 86.4 3.2 0.00011 34.1 8.7 76 102-184 8-95 (253)
446 3o38_A Short chain dehydrogena 86.3 2.6 8.9E-05 35.0 8.1 77 102-184 21-110 (266)
447 3lyl_A 3-oxoacyl-(acyl-carrier 86.2 4.2 0.00014 33.2 9.3 76 102-184 4-91 (247)
448 3guy_A Short-chain dehydrogena 86.2 3.2 0.00011 33.7 8.5 71 104-184 2-81 (230)
449 1lss_A TRK system potassium up 85.9 4.8 0.00017 29.4 8.7 70 103-184 4-78 (140)
450 1tt5_A APPBP1, amyloid protein 85.9 1.9 6.5E-05 40.6 7.6 61 86-146 13-77 (531)
451 3l4b_C TRKA K+ channel protien 85.8 4.3 0.00015 32.8 9.0 93 105-219 2-99 (218)
452 3ojo_A CAP5O; rossmann fold, c 85.7 8.5 0.00029 35.1 11.7 108 101-220 9-130 (431)
453 1tt5_B Ubiquitin-activating en 85.7 1.4 4.6E-05 40.5 6.4 35 102-136 39-74 (434)
454 3n58_A Adenosylhomocysteinase; 85.7 6.5 0.00022 36.3 10.8 91 101-222 245-336 (464)
455 3ucx_A Short chain dehydrogena 85.6 12 0.00042 30.9 12.0 76 102-184 10-97 (264)
456 4fn4_A Short chain dehydrogena 85.6 8.8 0.0003 32.3 11.1 76 102-184 6-93 (254)
457 2dpo_A L-gulonate 3-dehydrogen 85.6 1.9 6.4E-05 37.8 7.0 103 103-220 6-124 (319)
458 3t4e_A Quinate/shikimate dehyd 85.5 3.9 0.00013 35.7 9.0 58 75-135 122-181 (312)
459 3abi_A Putative uncharacterize 85.4 2.3 7.7E-05 37.6 7.6 70 101-184 14-86 (365)
460 2aef_A Calcium-gated potassium 85.2 2 6.7E-05 35.2 6.7 68 102-184 8-80 (234)
461 3e8x_A Putative NAD-dependent 85.2 2.1 7.3E-05 34.8 6.9 71 101-184 19-93 (236)
462 3pqe_A L-LDH, L-lactate dehydr 85.1 10 0.00035 33.2 11.6 107 101-219 3-122 (326)
463 4aj2_A L-lactate dehydrogenase 85.1 12 0.00041 32.8 12.0 109 102-220 18-137 (331)
464 3hn2_A 2-dehydropantoate 2-red 85.0 6.9 0.00024 33.6 10.4 92 104-217 3-101 (312)
465 4gsl_A Ubiquitin-like modifier 84.9 1.6 5.4E-05 41.9 6.5 35 102-136 325-360 (615)
466 3ktd_A Prephenate dehydrogenas 84.9 1.2 4.1E-05 39.5 5.4 94 101-220 6-101 (341)
467 3r3s_A Oxidoreductase; structu 84.8 11 0.00037 31.9 11.5 76 102-184 48-137 (294)
468 1yb1_A 17-beta-hydroxysteroid 84.6 5.7 0.00019 33.1 9.5 76 102-184 30-117 (272)
469 3vrd_B FCCB subunit, flavocyto 84.5 0.81 2.8E-05 40.6 4.2 34 103-136 2-37 (401)
470 3h2s_A Putative NADH-flavin re 84.4 7.7 0.00026 30.8 9.9 68 105-185 2-72 (224)
471 3k6j_A Protein F01G10.3, confi 84.3 4.8 0.00017 37.1 9.4 101 104-220 55-167 (460)
472 3tjr_A Short chain dehydrogena 84.1 4.5 0.00015 34.5 8.7 77 101-184 29-117 (301)
473 3svt_A Short-chain type dehydr 84.1 14 0.00046 30.9 11.7 80 101-184 9-100 (281)
474 3c7a_A Octopine dehydrogenase; 83.9 8.8 0.0003 34.1 10.9 100 104-218 3-115 (404)
475 3tnl_A Shikimate dehydrogenase 83.6 6.6 0.00023 34.3 9.6 58 75-135 128-187 (315)
476 3mog_A Probable 3-hydroxybutyr 83.5 2.5 8.7E-05 39.2 7.3 102 103-220 5-121 (483)
477 3rd5_A Mypaa.01249.C; ssgcid, 83.5 8 0.00027 32.5 10.0 73 101-184 14-95 (291)
478 3h5n_A MCCB protein; ubiquitin 83.5 3.2 0.00011 36.8 7.6 34 102-136 117-152 (353)
479 4ibo_A Gluconate dehydrogenase 83.4 2.5 8.5E-05 35.6 6.7 78 100-184 23-112 (271)
480 3d1l_A Putative NADP oxidoredu 83.4 3.2 0.00011 34.6 7.3 89 104-218 11-101 (266)
481 3sju_A Keto reductase; short-c 83.3 5.3 0.00018 33.6 8.8 76 102-184 23-110 (279)
482 3gaf_A 7-alpha-hydroxysteroid 83.1 4.3 0.00015 33.7 8.0 77 101-184 10-98 (256)
483 1tt7_A YHFP; alcohol dehydroge 83.1 1.6 5.5E-05 37.8 5.5 89 105-218 153-246 (330)
484 3rkr_A Short chain oxidoreduct 83.0 9.4 0.00032 31.6 10.1 77 102-185 28-116 (262)
485 1lnq_A MTHK channels, potassiu 82.9 7.4 0.00025 33.6 9.8 92 103-220 115-212 (336)
486 1yxm_A Pecra, peroxisomal tran 82.9 6.9 0.00024 33.0 9.4 81 102-184 17-109 (303)
487 3imf_A Short chain dehydrogena 82.8 3.9 0.00013 33.9 7.6 76 102-184 5-92 (257)
488 3grk_A Enoyl-(acyl-carrier-pro 82.7 6.4 0.00022 33.4 9.1 75 102-184 30-118 (293)
489 3awd_A GOX2181, putative polyo 82.7 6.1 0.00021 32.4 8.7 76 102-184 12-99 (260)
490 3v8b_A Putative dehydrogenase, 82.7 15 0.00052 30.8 11.5 76 102-184 27-114 (283)
491 3sx2_A Putative 3-ketoacyl-(ac 82.7 6.1 0.00021 33.0 8.9 76 102-184 12-111 (278)
492 3nyw_A Putative oxidoreductase 82.7 5.1 0.00017 33.1 8.2 80 101-184 5-96 (250)
493 2qyt_A 2-dehydropantoate 2-red 82.6 7.6 0.00026 32.9 9.6 97 103-217 8-115 (317)
494 3pk0_A Short-chain dehydrogena 82.6 4.3 0.00015 33.8 7.8 78 101-184 8-97 (262)
495 1zkd_A DUF185; NESG, RPR58, st 82.5 1.4 4.7E-05 39.9 4.8 47 100-146 78-131 (387)
496 3f9i_A 3-oxoacyl-[acyl-carrier 82.3 7.4 0.00025 31.8 9.1 73 101-184 12-93 (249)
497 3hdj_A Probable ornithine cycl 82.2 6.9 0.00024 34.0 9.2 75 99-185 117-193 (313)
498 4e6p_A Probable sorbitol dehyd 82.1 8.5 0.00029 31.8 9.5 74 101-184 6-91 (259)
499 1obb_A Maltase, alpha-glucosid 82.1 2.9 9.8E-05 38.9 6.9 75 103-184 3-86 (480)
500 4dcm_A Ribosomal RNA large sub 81.9 9.2 0.00031 34.0 10.1 118 102-244 38-155 (375)
No 1
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=100.00 E-value=2.6e-51 Score=363.13 Aligned_cols=223 Identities=38% Similarity=0.666 Sum_probs=204.0
Q ss_pred cccCeEEeeeccccceeeeeccEEEEeecCCCcEEEEEecCCeeEEEEcCcccccCCCchhHHHHHHHHHhhcCCCCCeE
Q 025141 27 RKSCWYEEEIEENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHPNPKTI 106 (257)
Q Consensus 27 ~~~~w~~~~~~~~~~~~~~~~~il~~~~s~~~~i~v~~~~~~g~~L~ldG~~~~~~~~~~~y~e~l~~~~l~~~~~~~~V 106 (257)
....|+ |++.++.++.|.++++|++++|+||+|.|++++.+|++|+|||.+|+++.|++.|||||+|+|++.+++|++|
T Consensus 9 ~~~~w~-e~~~~~~~~~~~v~~vl~~~~S~yQ~i~v~~s~~~G~~L~LDg~~q~te~De~~YhE~l~h~~l~~~p~pk~V 87 (294)
T 3o4f_A 9 EKKQWH-ETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHV 87 (294)
T ss_dssp -CEEEE-CCSSSSEEEEEEESEEEEEEC---CCEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSCCCEE
T ss_pred ccccee-eeccCCcceEEEEeeEEEeccCCCceEEEEEcCCcceEEEECCchhhccccHHHHHHHHHHHHHhhCCCCCeE
Confidence 456798 5677899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhh-hccCCCCCCCeEEEEcchHHHHhcCCCceeEEEEcCCC
Q 025141 107 FIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLV-VNKEAFSDPRLELVINDARAELESRKESYDVIIGDLAD 185 (257)
Q Consensus 107 L~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~-~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~D~~~ 185 (257)
|+||+|+|++++++++++++.+|++|||||+|+++||+||+ .+.+.+++||++++++||++|++...++||+||+|+++
T Consensus 88 LIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi~D~~d 167 (294)
T 3o4f_A 88 LIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTD 167 (294)
T ss_dssp EEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEEESCCC
T ss_pred EEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEEEeCCC
Confidence 99999999999999999888999999999999999999997 45556789999999999999999988999999999999
Q ss_pred CCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCceEEEeecCccc
Q 025141 186 PIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGCCALFSSYSF 255 (257)
Q Consensus 186 ~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~~~~~ 255 (257)
|. +|+..|++++||+. ++++|+|||++++|.++| +.+.+.+..+.++++++||.|.+|....|+|
T Consensus 168 p~--~~~~~L~t~eFy~~-~~~~L~p~Gv~v~q~~sp--~~~~~~~~~~~~~l~~~F~~v~~~~~~vPty 232 (294)
T 3o4f_A 168 PI--GPGESLFTSAFYEG-CKRCLNPGGIFVAQNGVC--FLQQEEAIDSHRKLSHYFSDVGFYQAAIPTY 232 (294)
T ss_dssp CC--CTTCCSSCCHHHHH-HHHTEEEEEEEEEEEEES--SSCCHHHHHHHHHHHHHCSEEEEEEECCTTS
T ss_pred cC--CCchhhcCHHHHHH-HHHHhCCCCEEEEecCCc--ccChHHHHHHHHHHHhhCCceeeeeeeeccC
Confidence 87 56678999999999 799999999999999888 6778889999999999999999998866655
No 2
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=100.00 E-value=3.2e-42 Score=313.46 Aligned_cols=222 Identities=21% Similarity=0.340 Sum_probs=187.5
Q ss_pred CcCCCCccccCeEEee--eccccceeeeeccEEEEeecCCCcEEEEEecCCeeEEEEcCcccccCCCchhHHHHHHHHHh
Q 025141 20 NVALTGYRKSCWYEEE--IEENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPAL 97 (257)
Q Consensus 20 ~~~~~~~~~~~w~~~~--~~~~~~~~~~~~~il~~~~s~~~~i~v~~~~~~g~~L~ldG~~~~~~~~~~~y~e~l~~~~l 97 (257)
.-+.|++.+++|+... .+++...+|+++++|++++|+||+|.|++++.+||+|+|||.+|+++.| +.|+|+|+|+++
T Consensus 123 ~~~~~~~~rg~~~~~~~p~sdg~~~~y~v~~vl~~~~S~yQ~I~V~es~~~Gr~L~LDG~~Q~te~D-~~Y~e~l~h~~l 201 (381)
T 3c6k_A 123 VKRLPPIVRGGAIDRYWPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIMGSGK 201 (381)
T ss_dssp EECCCCEEESCSSCCBCCCTTCCCBBCCEEEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTC-HHHHHHHTTTTC
T ss_pred hcccCccccCCccCceeECCCCcEEEEEeEEEEEeCCCCCceEEEEEcCCcceEEEECCceeeeCCh-HHHHHHHHHHHh
Confidence 3456777778777655 4579999999999999999999999999999999999999999999998 679999999887
Q ss_pred hcCCCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhh-ccCCCC---CCCeEEEEcchHHHHhc--
Q 025141 98 LHHPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVV-NKEAFS---DPRLELVINDARAELES-- 171 (257)
Q Consensus 98 ~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~-~~~~~~---~~rv~i~~~Da~~~l~~-- 171 (257)
+. ++|++||+||+|+|++++++++++. ++|++|||||+|+++|++||+. .+..++ ++|++++++||++|++.
T Consensus 202 ~~-~~pkrVLIIGgGdG~~~revlkh~~-~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~ 279 (381)
T 3c6k_A 202 ED-YTGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYA 279 (381)
T ss_dssp CC-CTTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHH
T ss_pred hc-CCCCeEEEECCCcHHHHHHHHhcCC-ceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhh
Confidence 65 4589999999999999999999875 7999999999999999999973 333333 46799999999999974
Q ss_pred -CCCceeEEEEcCCCCCC-C---CcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCceE
Q 025141 172 -RKESYDVIIGDLADPIE-G---GPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGC 246 (257)
Q Consensus 172 -~~~~fDvIi~D~~~~~~-~---~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~F~~v~ 246 (257)
..++||+||+|++++.. . ++...||+++||+. ++++|+|||++++|.++| +. .+.++.+.++|+++|+.+.
T Consensus 280 ~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~-~~~~L~p~GVlv~Q~~s~--~~-~~~~~~i~~tl~~vF~~v~ 355 (381)
T 3c6k_A 280 KEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDL-SMKVLKQDGKYFTQGNCV--NL-TEALSLYEEQLGRLYCPVE 355 (381)
T ss_dssp HHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHH-HHHTEEEEEEEEEEEEET--TC-HHHHHHHHHHHTTSSSCEE
T ss_pred hccCceeEEEECCCCCcccCcccCcchHHHHHHHHHH-HHHhcCCCCEEEEecCCC--cc-hhHHHHHHHHHHHhCCcce
Confidence 45789999999986431 1 33457999999999 799999999999999887 43 5678899999999999886
Q ss_pred EE
Q 025141 247 CA 248 (257)
Q Consensus 247 ~~ 248 (257)
.+
T Consensus 356 ~~ 357 (381)
T 3c6k_A 356 FS 357 (381)
T ss_dssp EE
T ss_pred Ee
Confidence 53
No 3
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=100.00 E-value=5.4e-41 Score=296.04 Aligned_cols=217 Identities=33% Similarity=0.686 Sum_probs=197.3
Q ss_pred cCeEEeeeccccceeeeeccEEEEeecCCCcEEEEEecCCeeEEEEcCcccccCCCchhHHHHHHHHHhhcCCCCCeEEE
Q 025141 29 SCWYEEEIEENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHPNPKTIFI 108 (257)
Q Consensus 29 ~~w~~~~~~~~~~~~~~~~~il~~~~s~~~~i~v~~~~~~g~~L~ldG~~~~~~~~~~~y~e~l~~~~l~~~~~~~~VL~ 108 (257)
..|++|..+++.+.++..+++|++.+|+||+|+|++++.+|+.|++||..|+++.+++.|+++|.+++++.++++++||+
T Consensus 2 ~~w~~e~~~~~~~~~~~~~~~l~~~~s~~~~i~v~~~~~~g~~L~ldg~~q~~~~de~~y~e~l~~~~l~~~~~~~~VLd 81 (275)
T 1iy9_A 2 ELWYTEKQTKNFGITMKVNKTLHTEQTEFQHLEMVETEEFGNMLFLDGMVMTSEKDEFVYHEMVAHVPLFTHPNPEHVLV 81 (275)
T ss_dssp CEEEEEEEETTEEEEEEEEEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSSCCEEEE
T ss_pred CccEEEecCCCcEEEEeeeeEEEEEECCCceEEEEEcCCCCEEEEECCEEeecccchhHHHHHHHHHHHhhCCCCCEEEE
Confidence 37999999999999999999999999999999999999999999999999999999999999999999888889999999
Q ss_pred EeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEEEcCCCCCC
Q 025141 109 MGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDLADPIE 188 (257)
Q Consensus 109 IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~D~~~~~~ 188 (257)
||||+|.++++++++++..+|++||+||++++.|+++++.....+.++|++++++|+++++....++||+|++|++++.
T Consensus 82 iG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~d~~~~~- 160 (275)
T 1iy9_A 82 VGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMVDSTEPV- 160 (275)
T ss_dssp ESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEESCSSCC-
T ss_pred ECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEECCCCCC-
Confidence 9999999999999986678999999999999999999864222346799999999999999877789999999998876
Q ss_pred CCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCceEEEee
Q 025141 189 GGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGCCALF 250 (257)
Q Consensus 189 ~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~ 250 (257)
.+..+|++.+|++. ++++|+|||+++++.++| +...+.++.+.++++++|+++.+|..
T Consensus 161 -~~~~~l~~~~~~~~-~~~~L~pgG~lv~~~~~~--~~~~~~~~~~~~~l~~~F~~v~~~~~ 218 (275)
T 1iy9_A 161 -GPAVNLFTKGFYAG-IAKALKEDGIFVAQTDNP--WFTPELITNVQRDVKEIFPITKLYTA 218 (275)
T ss_dssp -SCCCCCSTTHHHHH-HHHHEEEEEEEEEECCCT--TTCHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred -CcchhhhHHHHHHH-HHHhcCCCcEEEEEcCCc--cccHHHHHHHHHHHHHhCCCeEEEEE
Confidence 45568999999999 799999999999998776 56788899999999999999999875
No 4
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=100.00 E-value=1.1e-41 Score=303.25 Aligned_cols=221 Identities=38% Similarity=0.660 Sum_probs=185.2
Q ss_pred ccCeEEeeeccccceeeeeccEEEEeecCCCcEEEEEecCCeeEEEEcCcccccCCCchhHHHHHHHHHhhcCCCCCeEE
Q 025141 28 KSCWYEEEIEENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHPNPKTIF 107 (257)
Q Consensus 28 ~~~w~~~~~~~~~~~~~~~~~il~~~~s~~~~i~v~~~~~~g~~L~ldG~~~~~~~~~~~y~e~l~~~~l~~~~~~~~VL 107 (257)
...|. |...++.+.++.++++|++++|+||+|.|++++.+|++|++||.+|+++++++.|+|++++++++.++++++||
T Consensus 10 ~~~~~-~~~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~L~ldg~~~~~~~de~~Y~e~l~~~~l~~~~~~~~VL 88 (294)
T 3adn_A 10 KKQWH-ETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVL 88 (294)
T ss_dssp --CEE-CCSCSSEEEEECCSCEEEEC----CCCEEECCTTTCCEEEETTEEEEETTTHHHHHHHHHHHHHHHSTTCCEEE
T ss_pred hhccc-cccCCCceEEEEcccEEEEeECCCceEEEEEcCCcceEEEECCeEeeccCchhHHHHHHHHHHHhcCCCCCEEE
Confidence 45798 56789999999999999999999999999999999999999999999999999999999999999899999999
Q ss_pred EEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhc-cCCCCCCCeEEEEcchHHHHhcCCCceeEEEEcCCCC
Q 025141 108 IMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVN-KEAFSDPRLELVINDARAELESRKESYDVIIGDLADP 186 (257)
Q Consensus 108 ~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~-~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~D~~~~ 186 (257)
+||||+|.++++++++++..+|++||+|++++++|+++++.. .+.+.++|++++++|++++++...++||+|++|++++
T Consensus 89 diG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi~D~~~p 168 (294)
T 3adn_A 89 IIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDP 168 (294)
T ss_dssp EESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEEECC---
T ss_pred EEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEEECCCCc
Confidence 999999999999999877789999999999999999999743 3345689999999999999987778999999999987
Q ss_pred CCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCceEEEeecCcc
Q 025141 187 IEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGCCALFSSYS 254 (257)
Q Consensus 187 ~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~~~~ 254 (257)
. .|...|++.+|++. ++++|+|||+++++.++| +...+.++.+.++++++|+.+.+|....++
T Consensus 169 ~--~~~~~l~~~~f~~~-~~~~LkpgG~lv~~~~s~--~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~ 231 (294)
T 3adn_A 169 I--GPGESLFTSAFYEG-CKRCLNPGGIFVAQNGVC--FLQQEEAIDSHRKLSHYFSDVGFYQAAIPT 231 (294)
T ss_dssp ---------CCHHHHHH-HHHTEEEEEEEEEEEEEC--SSCCHHHHHHHHHHHHHCSEEEEEEEECTT
T ss_pred c--CcchhccHHHHHHH-HHHhcCCCCEEEEecCCc--ccchHHHHHHHHHHHHHCCCeEEEEEEecc
Confidence 6 55568999999999 799999999999998877 566788999999999999999998864333
No 5
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=100.00 E-value=2.9e-39 Score=285.99 Aligned_cols=222 Identities=33% Similarity=0.605 Sum_probs=198.6
Q ss_pred cCeEEee--eccccceeeeeccEEEEeecCCCcEEEEEecCCeeEEEEcCcccccCCCchhHHHHHHHHHhhcCCCCCeE
Q 025141 29 SCWYEEE--IEENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHPNPKTI 106 (257)
Q Consensus 29 ~~w~~~~--~~~~~~~~~~~~~il~~~~s~~~~i~v~~~~~~g~~L~ldG~~~~~~~~~~~y~e~l~~~~l~~~~~~~~V 106 (257)
+.||.|. ..++.+.+++.+++|++.+|+||+|.|++++.+|+.|++||.+|+++++++.|++++.+++++.++++++|
T Consensus 3 ~~w~~e~~~~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~l~ldg~~q~~~~~e~~Y~e~l~~~~l~~~~~~~~V 82 (283)
T 2i7c_A 3 KKWFSEFSIMWPGQAFSLKIKKILYETKSKYQNVLVFESTTYGKVLVLDGVIQLTEKDEFAYHEMMTHVPMTVSKEPKNV 82 (283)
T ss_dssp CCEEEECCTTSTTCCEEEEEEEEEEEEECSSSEEEEEEESSSCEEEEETTEEEEETTTHHHHHHHHHHHHHTTSSSCCEE
T ss_pred ceeEEEcccCCCCceEEEecccEEEEEECCCccEEEEEcCCCCEEEEECCEeeecccchhhHHHHHHHHHHhcCCCCCeE
Confidence 5799998 66999999999999999999999999999999999999999999999999999999999999888899999
Q ss_pred EEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEEEcCCCC
Q 025141 107 FIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDLADP 186 (257)
Q Consensus 107 L~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~D~~~~ 186 (257)
|+||||+|.++++++++.+..+|++||+|+.+++.|+++++..+..+.++|++++++|+++++....++||+|++|++++
T Consensus 83 LdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~ 162 (283)
T 2i7c_A 83 LVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVDSSDP 162 (283)
T ss_dssp EEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEECCCT
T ss_pred EEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEEcCCCC
Confidence 99999999999999998767899999999999999999987432224578999999999999977678899999999887
Q ss_pred CCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCceEEEeecCccc
Q 025141 187 IEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGCCALFSSYSF 255 (257)
Q Consensus 187 ~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~~~~~ 255 (257)
. .+...+++.+|++. ++++|+|||+++++..++ +...+.+..+.++++++|+++.+|....++|
T Consensus 163 ~--~~~~~l~~~~~l~~-~~~~L~pgG~lv~~~~~~--~~~~~~~~~~~~~l~~~F~~v~~~~~~vP~y 226 (283)
T 2i7c_A 163 I--GPAETLFNQNFYEK-IYNALKPNGYCVAQCESL--WIHVGTIKNMIGYAKKLFKKVEYANISIPTY 226 (283)
T ss_dssp T--TGGGGGSSHHHHHH-HHHHEEEEEEEEEECCCT--TTCHHHHHHHHHHHHTTCSEEEEEEEECTTS
T ss_pred C--CcchhhhHHHHHHH-HHHhcCCCcEEEEECCCc--ccCHHHHHHHHHHHHHHCCceEEEEEEcCCc
Confidence 6 55568899999999 799999999999998776 6677888999999999999999887744443
No 6
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=100.00 E-value=2.1e-38 Score=283.28 Aligned_cols=224 Identities=31% Similarity=0.627 Sum_probs=188.2
Q ss_pred CCCCccccCeEEeeec--cccceeeeeccEEEEeecCCCcEEEEEecCCeeEEEEcCcccccCCCchhHHHHHHHHHhhc
Q 025141 22 ALTGYRKSCWYEEEIE--ENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLH 99 (257)
Q Consensus 22 ~~~~~~~~~w~~~~~~--~~~~~~~~~~~il~~~~s~~~~i~v~~~~~~g~~L~ldG~~~~~~~~~~~y~e~l~~~~l~~ 99 (257)
..++...++||.|..+ ++...+++++++|++.+|+||+|+|++++.+|+.|++||.+|+++++++.|++++.+++++.
T Consensus 13 ~~~~~~~~~w~~e~~~~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~L~ldg~~~~~~~de~~y~e~l~~~~l~~ 92 (304)
T 2o07_A 13 SGPAAIREGWFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERDEFSYQEMIANLPLCS 92 (304)
T ss_dssp -----CBTTEEEECCTTSTTEEEEEEEEEEEEEEECSSSEEEEEEESSSCEEEEETTEEEEETTTHHHHHHHHHHHHHTT
T ss_pred CCCcccccceEEEeccCCCCceEEEEeccEEEEEECCCcEEEEEEcCCCceEEEECCEEEeecccchHHHHHHHHHHHhh
Confidence 3455667899999865 89999999999999999999999999999999999999999999999999999999999888
Q ss_pred CCCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025141 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (257)
Q Consensus 100 ~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvI 179 (257)
++++++||+||||+|.++++++++.+..+|++||+|+++++.|+++++.....+.++|++++++|+++++....++||+|
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~I 172 (304)
T 2o07_A 93 HPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVI 172 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEE
Confidence 88899999999999999999999866689999999999999999998642112346899999999999998777899999
Q ss_pred EEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCceEEEee
Q 025141 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGCCALF 250 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~ 250 (257)
++|++++. .|...+++.+|++. ++++|+|||+++++..++ |........+.++++++|+++..+..
T Consensus 173 i~d~~~~~--~~~~~l~~~~~l~~-~~~~LkpgG~lv~~~~~~--~~~~~~~~~~~~~l~~~f~~v~~~~~ 238 (304)
T 2o07_A 173 ITDSSDPM--GPAESLFKESYYQL-MKTALKEDGVLCCQGECQ--WLHLDLIKEMRQFCQSLFPVVAYAYC 238 (304)
T ss_dssp EEECC-------------CHHHHH-HHHHEEEEEEEEEEEECT--TTCHHHHHHHHHHHHHHCSEEEEEEE
T ss_pred EECCCCCC--CcchhhhHHHHHHH-HHhccCCCeEEEEecCCc--ccchHHHHHHHHHHHHhCCCceeEEE
Confidence 99998765 44456888999999 799999999999998666 66777888999999999999988754
No 7
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=100.00 E-value=2.4e-38 Score=281.79 Aligned_cols=220 Identities=34% Similarity=0.632 Sum_probs=190.7
Q ss_pred cccCeEEeeec-cccceeeeeccEEEEeecCCCcEEEEEecCCeeEEEEcCcccccCCCchhHHHHHHHHHhhcCCCCCe
Q 025141 27 RKSCWYEEEIE-ENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHPNPKT 105 (257)
Q Consensus 27 ~~~~w~~~~~~-~~~~~~~~~~~il~~~~s~~~~i~v~~~~~~g~~L~ldG~~~~~~~~~~~y~e~l~~~~l~~~~~~~~ 105 (257)
..+.||.|..+ ++.+.++..+++|++.+|+||+|.|++++.+|+.|++||.+|++.++++.|++++.+++++.++++++
T Consensus 14 ~~~~w~~e~~~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~l~ldg~~~~~~~de~~y~e~l~~~~l~~~~~~~~ 93 (296)
T 1inl_A 14 RQHLWYFEYYTGNNVGLFMKMNRVIYSGQSDIQRIDIFENPDLGVVFALDGITMTTEKDEFMYHEMLAHVPMFLHPNPKK 93 (296)
T ss_dssp CSSEEEEEECTTSSEEEEEECSEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSSCCE
T ss_pred CCCceEEEecCCCCceEEeecccEEEEEECCCccEEEEEcCCCcEEEEECCEEeecccchhHHHHHHhHHHHhcCCCCCE
Confidence 56789999998 99999999999999999999999999999999999999999999999999999999999888888999
Q ss_pred EEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEEEcCCC
Q 025141 106 IFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDLAD 185 (257)
Q Consensus 106 VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~D~~~ 185 (257)
||+||||+|.++++++++.+..+|++||+|+.+++.|+++++.....+.+++++++++|+++++....++||+|++|+++
T Consensus 94 VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~ 173 (296)
T 1inl_A 94 VLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIIIDSTD 173 (296)
T ss_dssp EEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEEEC--
T ss_pred EEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEEcCCC
Confidence 99999999999999999866689999999999999999998531112346899999999999987767889999999987
Q ss_pred CCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCceEEEee
Q 025141 186 PIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGCCALF 250 (257)
Q Consensus 186 ~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~ 250 (257)
++. ++...+++.+|++. ++++|+|||+++++.++| +...+.+..+.++++++|+++.+|..
T Consensus 174 ~~~-~~~~~l~~~~~l~~-~~~~LkpgG~lv~~~~~~--~~~~~~~~~~~~~l~~~F~~v~~~~~ 234 (296)
T 1inl_A 174 PTA-GQGGHLFTEEFYQA-CYDALKEDGVFSAETEDP--FYDIGWFKLAYRRISKVFPITRVYLG 234 (296)
T ss_dssp ---------CCSHHHHHH-HHHHEEEEEEEEEECCCT--TTTHHHHHHHHHHHHHHCSEEEEEEE
T ss_pred ccc-CchhhhhHHHHHHH-HHHhcCCCcEEEEEccCc--ccCHHHHHHHHHHHHHHCCceEEEEe
Confidence 732 45567899999999 799999999999998776 56778899999999999999998874
No 8
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=100.00 E-value=5.9e-38 Score=277.25 Aligned_cols=214 Identities=34% Similarity=0.651 Sum_probs=188.8
Q ss_pred cCeEEeeeccccceeeeeccEEEEeecCCCcEEEEEecCCeeEEEEcCcccccCCCchhHHHHHHHHHhhcCCCCCeEEE
Q 025141 29 SCWYEEEIEENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHPNPKTIFI 108 (257)
Q Consensus 29 ~~w~~~~~~~~~~~~~~~~~il~~~~s~~~~i~v~~~~~~g~~L~ldG~~~~~~~~~~~y~e~l~~~~l~~~~~~~~VL~ 108 (257)
+.||+|..+++.+.+++++++|++.+|+||+|.|++++.+|+.|++||..|+++++++.|++++.+++++.++++++||+
T Consensus 2 ~~w~~e~~~~~~~~~~~~~~~l~~~~s~~~~i~v~~~~~~g~~L~ldg~~q~~~~d~~~y~e~l~~~~l~~~~~~~~VLd 81 (281)
T 1mjf_A 2 ERAFIEWYPRGYGVAFKIKKKIYEKLSKYQKIEVYETEGFGRLLALDGTVQLVTLGERSYHEPLVHPAMLAHPKPKRVLV 81 (281)
T ss_dssp --CEEEEEGGGEEEEECEEEEEEEEECSSCEEEEEEESSSCEEEEETTEEEEETTTTHHHHHHHHHHHHHHSSCCCEEEE
T ss_pred CccEEEecCCCceEEEeeccEEEEeeCCCccEEEEECCCccEEEEECCEeeeccccchHHHHHHHHHHHhhCCCCCeEEE
Confidence 57999999999999999999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCC-------CCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025141 109 MGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAF-------SDPRLELVINDARAELESRKESYDVIIG 181 (257)
Q Consensus 109 IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~-------~~~rv~i~~~Da~~~l~~~~~~fDvIi~ 181 (257)
||||+|.++++++++ +..+|++||+|+.+++.|++++.. ...+ .+++++++.+|+++++.. .++||+|++
T Consensus 82 iG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~-~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~fD~Ii~ 158 (281)
T 1mjf_A 82 IGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKI-DNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRGFDVIIA 158 (281)
T ss_dssp EECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCT-TTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCCEEEEEE
T ss_pred EcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhh-ccccccccccCCCCcEEEEECchHHHhcc-cCCeeEEEE
Confidence 999999999999998 668999999999999999999822 1122 468999999999999877 788999999
Q ss_pred cCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCceEEEee
Q 025141 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGCCALF 250 (257)
Q Consensus 182 D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~ 250 (257)
|++++. .+...+++.+|++. ++++|+|||+++++.+++ +...+.++.+.++++++|+++.+|..
T Consensus 159 d~~~~~--~~~~~l~~~~~l~~-~~~~L~pgG~lv~~~~~~--~~~~~~~~~~~~~l~~~f~~v~~~~~ 222 (281)
T 1mjf_A 159 DSTDPV--GPAKVLFSEEFYRY-VYDALNNPGIYVTQAGSV--YLFTDELISAYKEMKKVFDRVYYYSF 222 (281)
T ss_dssp ECCCCC-------TTSHHHHHH-HHHHEEEEEEEEEEEEET--TTSHHHHHHHHHHHHHHCSEEEEEEE
T ss_pred CCCCCC--CcchhhhHHHHHHH-HHHhcCCCcEEEEEcCCc--ccCHHHHHHHHHHHHHHCCceEEEEE
Confidence 998775 44467889999999 799999999999998766 56778899999999999999998876
No 9
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=100.00 E-value=3.9e-38 Score=282.62 Aligned_cols=221 Identities=44% Similarity=0.732 Sum_probs=194.0
Q ss_pred cccCeEEeeeccccceeeeeccEEEEeecCCCcEEEEEecCCeeEEEEcCcccccCCCchhHHHHHHHHHhhcCCCCCeE
Q 025141 27 RKSCWYEEEIEENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHPNPKTI 106 (257)
Q Consensus 27 ~~~~w~~~~~~~~~~~~~~~~~il~~~~s~~~~i~v~~~~~~g~~L~ldG~~~~~~~~~~~y~e~l~~~~l~~~~~~~~V 106 (257)
....||.|..+++.+.+++++++|++.+|+||+|.|++++.+|++|++||.+|+++.+++.|++++.+++++.++++++|
T Consensus 2 ~~~~w~~e~~~~~~~~~~~~~~vl~~~~s~~q~i~v~~~~~~g~~l~ldg~~q~~~~~e~~Y~e~l~~~~l~~~~~~~~V 81 (314)
T 1uir_A 2 DYGMYFFEHVTPYETLVRRMERVIASGKTPFQDYFLFESKGFGKVLILDKDVQSTERDEYIYHETLVHPAMLTHPEPKRV 81 (314)
T ss_dssp CSSCEEEEESSSSEEEEEECSEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSCCCEE
T ss_pred CCCceEEEEcCCCcEEEEecceEEEEEECCCCCEEEEEcCCCcEEEEECCEEeeeecchhHHHHHHHHHHHhcCCCCCeE
Confidence 34689999999999999999999999999999999999999999999999999999999999999999999888899999
Q ss_pred EEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhh-ccCCCCCCCeEEEEcchHHHHhcCCCceeEEEEcCCC
Q 025141 107 FIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVV-NKEAFSDPRLELVINDARAELESRKESYDVIIGDLAD 185 (257)
Q Consensus 107 L~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~-~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~D~~~ 185 (257)
|+||||+|.++++++++.+..+|++||+|+.+++.|+++++. +...+.+++++++.+|+++++....++||+|++|+++
T Consensus 82 LdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~ 161 (314)
T 1uir_A 82 LIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVIIDLTD 161 (314)
T ss_dssp EEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEEEECCC
T ss_pred EEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEEECCCC
Confidence 999999999999999986668999999999999999999863 2211346899999999999987777899999999987
Q ss_pred CC-CCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCC-CChHHHHHHHHHHhhhCCceEEEee
Q 025141 186 PI-EGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIF-SHTEVFSCIYNTLRQVFKCGCCALF 250 (257)
Q Consensus 186 ~~-~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~-~~~~~~~~~~~~l~~~F~~v~~~~~ 250 (257)
+. ...|...|++.+|++. ++++|+|||+++++.+++ + .+.+.++.+.++++++|+++.++..
T Consensus 162 ~~~~~~~~~~l~~~~~l~~-~~~~LkpgG~lv~~~~~~--~~~~~~~~~~~~~~l~~~F~~v~~~~~ 225 (314)
T 1uir_A 162 PVGEDNPARLLYTVEFYRL-VKAHLNPGGVMGMQTGMI--LLTHHRVHPVVHRTVREAFRYVRSYKN 225 (314)
T ss_dssp CBSTTCGGGGGSSHHHHHH-HHHTEEEEEEEEEEEEEE--CC---CHHHHHHHHHHTTCSEEEEEEE
T ss_pred cccccCcchhccHHHHHHH-HHHhcCCCcEEEEEccCc--cccCHHHHHHHHHHHHHHCCceEEEEE
Confidence 65 1134467889999999 799999999999997665 3 4456788999999999999998864
No 10
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=100.00 E-value=5.5e-38 Score=281.74 Aligned_cols=211 Identities=35% Similarity=0.668 Sum_probs=179.6
Q ss_pred eccccceeeeeccEEEEeecCCCcEEEEEecCCeeEEEEcCcccccCCCchhHHHHHHHHHhhcCCCCCeEEEEeccchH
Q 025141 36 IEENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHPNPKTIFIMGGGEGS 115 (257)
Q Consensus 36 ~~~~~~~~~~~~~il~~~~s~~~~i~v~~~~~~g~~L~ldG~~~~~~~~~~~y~e~l~~~~l~~~~~~~~VL~IG~G~G~ 115 (257)
..++...++.++++|++.+|+||+|.|++++.+|+.|++||.+|+++++++.|++++.+++++.++++++||+||||+|.
T Consensus 42 ~~~~~~~~~~~~~vl~~~~s~~q~i~v~~~~~~g~~l~ldg~~q~~~~de~~Y~e~l~~l~l~~~~~~~~VLdIG~G~G~ 121 (314)
T 2b2c_A 42 AWPGQAFSLQVKKVLFHEKSKYQDVLVFESTTYGNVLVLDGIVQATERDEFSYQEMLAHLPMFAHPDPKRVLIIGGGDGG 121 (314)
T ss_dssp CCTTEEEEEEEEEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEESSSSSHHHHHHHHHHHHHSSSCCEEEEESCTTSH
T ss_pred cCCCceEEeecccEEEEEECCCCCEEEEEcCCCCEEEEECCEeecCCcchhHHHHHHHHHHHhhCCCCCEEEEEcCCcCH
Confidence 56889999999999999999999999999999999999999999999999999999999998888889999999999999
Q ss_pred HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEEEcCCCCCCCCcccCC
Q 025141 116 TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDLADPIEGGPCYKL 195 (257)
Q Consensus 116 ~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~D~~~~~~~~p~~~L 195 (257)
++++++++.+..+|++||+|+.+++.|+++++.....+.++|++++++|+++++....++||+|++|++++. .|...+
T Consensus 122 ~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~--~~~~~l 199 (314)
T 2b2c_A 122 ILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIITDSSDPV--GPAESL 199 (314)
T ss_dssp HHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEECCC-----------
T ss_pred HHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEEcCCCCC--Ccchhh
Confidence 999999986678999999999999999999864311234689999999999999776788999999998775 444578
Q ss_pred chHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCceEEEeec
Q 025141 196 YTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGCCALFS 251 (257)
Q Consensus 196 ~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~ 251 (257)
++.+|++. ++++|+|||+++++.+++ +.....+..+.++++++|+++.++...
T Consensus 200 ~t~~~l~~-~~~~LkpgG~lv~~~~~~--~~~~~~~~~~~~~l~~vF~~v~~~~~~ 252 (314)
T 2b2c_A 200 FGQSYYEL-LRDALKEDGILSSQGESV--WLHLPLIAHLVAFNRKIFPAVTYAQSI 252 (314)
T ss_dssp ----HHHH-HHHHEEEEEEEEEECCCT--TTCHHHHHHHHHHHHHHCSEEEEEEEE
T ss_pred hHHHHHHH-HHhhcCCCeEEEEECCCc--ccCHHHHHHHHHHHHHHCCcceEEEEE
Confidence 89999999 799999999999998776 667788999999999999999988773
No 11
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=100.00 E-value=4.1e-38 Score=285.45 Aligned_cols=210 Identities=24% Similarity=0.442 Sum_probs=176.7
Q ss_pred cccceeeeeccEEEEeecCCCcEEEEEecCCeeEEEEcCcccccCCCchhHHHHHHHHHhhcCCCCCeEEEEeccchHHH
Q 025141 38 ENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHPNPKTIFIMGGGEGSTA 117 (257)
Q Consensus 38 ~~~~~~~~~~~il~~~~s~~~~i~v~~~~~~g~~L~ldG~~~~~~~~~~~y~e~l~~~~l~~~~~~~~VL~IG~G~G~~~ 117 (257)
++...+++++++|++++|+||+|.|++++.+|++|++||.+|++++| +.|||+|+++++ .+++|++||+||+|+|+++
T Consensus 126 ~~~~~~~~v~~vl~~~~S~yQ~I~V~es~~~G~~L~LDG~~q~te~D-~~YhE~l~~~~~-~~p~pkrVL~IGgG~G~~a 203 (364)
T 2qfm_A 126 DGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIMGSGK-EDYTGKDVLILGGGDGGIL 203 (364)
T ss_dssp TCCCBBCCEEEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTC-HHHHHHHTTTTC-CCCTTCEEEEEECTTCHHH
T ss_pred CCcEEEEEeeeEEEeccCCCeeEEEEEeCCcceEEEECCEEeeecCc-hHHHHHHhhhhh-hCCCCCEEEEEECChhHHH
Confidence 46788889999999999999999999999999999999999999999 999999999887 6789999999999999999
Q ss_pred HHHHhcCCCcEEEEEECCHHHHHHHHhhhhh-ccCCCCCC---CeEEEEcchHHHHhc---CCCceeEEEEcCCC-CCCC
Q 025141 118 REILRHKTVEKVVMCDIDEEVVEFCKSYLVV-NKEAFSDP---RLELVINDARAELES---RKESYDVIIGDLAD-PIEG 189 (257)
Q Consensus 118 ~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~-~~~~~~~~---rv~i~~~Da~~~l~~---~~~~fDvIi~D~~~-~~~~ 189 (257)
+++++++. .+|++|||||+++++||++|+. +...+++| |++++++||++|++. ..++||+||+|+++ |...
T Consensus 204 rellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~fDvII~D~~d~P~~~ 282 (364)
T 2qfm_A 204 CEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPIST 282 (364)
T ss_dssp HHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCC
T ss_pred HHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCCceEEEECCCCcccCc
Confidence 99999865 8999999999999999999973 32334555 899999999999986 46889999999997 6533
Q ss_pred CcccCCchHHHHHHHH----cCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCceEE--EeecCccc
Q 025141 190 GPCYKLYTKSFYEFVV----KPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGCC--ALFSSYSF 255 (257)
Q Consensus 190 ~p~~~L~t~ef~~~~~----~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~--~~~~~~~~ 255 (257)
.| .+|++.+||+. + +++|+|||+++++.+++. . ++....+.+.+++.|+.|.. |....|+|
T Consensus 283 ~p-~~L~t~eFy~~-~~~~~~~~L~pgGilv~qs~s~~--~-~e~~~~~~~~l~~~F~~v~~~~~~~~vPsy 349 (364)
T 2qfm_A 283 SP-EEDSTWEFLRL-ILDLSMKVLKQDGKYFTQGNCVN--L-TEALSLYEEQLGRLYCPVEFSKEIVCVPSY 349 (364)
T ss_dssp C-----CHHHHHHH-HHHHHHHTEEEEEEEEEEEEETT--C-HHHHHHHHHHHTTSSSCEEEEEEEECCGGG
T ss_pred Cc-hhhhHHHHHHH-HHHHHHhhCCCCcEEEEEcCCcc--h-HHHHHHHHHHHHHhCCceEEeeEeeecCCc
Confidence 45 36999999999 6 899999999999988763 2 44444444569999999998 66655555
No 12
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=100.00 E-value=5.8e-37 Score=275.89 Aligned_cols=219 Identities=33% Similarity=0.598 Sum_probs=195.4
Q ss_pred cccCeEEeeec--cccceeeeeccEEEEeecCCCcEEEEEecCCeeEEEEcCcccccCCCchhHHHHHHHHHhhcCCCCC
Q 025141 27 RKSCWYEEEIE--ENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHPNPK 104 (257)
Q Consensus 27 ~~~~w~~~~~~--~~~~~~~~~~~il~~~~s~~~~i~v~~~~~~g~~L~ldG~~~~~~~~~~~y~e~l~~~~l~~~~~~~ 104 (257)
..+.|+.|..+ ++.+.++..+++|++++|+||+|.|++++.+|+.|++||.+|++.++++.|+|++.+++++.+++++
T Consensus 39 ~~~~w~~e~~~~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~l~ldg~~~~~~~de~~y~e~l~~~~l~~~~~~~ 118 (321)
T 2pt6_A 39 FSKKWFSEFSIMWPGQAFSLKIKKILYETKSKYQNVLVFESTTYGKVLVLDGVIQLTEKDEFAYHEMMTHVPMTVSKEPK 118 (321)
T ss_dssp --CCEEEECCTTSTTCCEEEEEEEEEEEEECSSCEEEEEEESSSCEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSSCC
T ss_pred ccceEEEEeccCCCCceEEEecccEEEEEECCCceEEEEEcCCCcEEEEECCEeeeCcccchHHHHHHHHHHHhcCCCCC
Confidence 35789999988 8999999999999999999999999999989999999999999999999999999999988888899
Q ss_pred eEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEEEcCC
Q 025141 105 TIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDLA 184 (257)
Q Consensus 105 ~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~D~~ 184 (257)
+||+||||+|.++++++++.+..+|++||+|+++++.|+++++.....+.+++++++.+|+++++....++||+|++|++
T Consensus 119 ~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~d~~ 198 (321)
T 2pt6_A 119 NVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVDSS 198 (321)
T ss_dssp EEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEECC
T ss_pred EEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEECCc
Confidence 99999999999999999986668999999999999999999864222234689999999999998766788999999998
Q ss_pred CCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCceEEEee
Q 025141 185 DPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGCCALF 250 (257)
Q Consensus 185 ~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~ 250 (257)
++. .|...+++.+|++. ++++|+|||+++++..++ +.+.+.+.++.+++++.|+++.+|..
T Consensus 199 ~p~--~~~~~l~~~~~l~~-~~~~LkpgG~lv~~~~~~--~~~~~~~~~~~~~l~~~F~~v~~~~~ 259 (321)
T 2pt6_A 199 DPI--GPAETLFNQNFYEK-IYNALKPNGYCVAQCESL--WIHVGTIKNMIGYAKKLFKKVEYANI 259 (321)
T ss_dssp CSS--SGGGGGSSHHHHHH-HHHHEEEEEEEEEEECCT--TTCHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCC--CcchhhhHHHHHHH-HHHhcCCCcEEEEEcCCc--ccCHHHHHHHHHHHHHHCCCeEEEEE
Confidence 775 45567888999999 799999999999998766 56778899999999999999999875
No 13
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=100.00 E-value=1.9e-36 Score=270.46 Aligned_cols=224 Identities=33% Similarity=0.599 Sum_probs=191.5
Q ss_pred CCCccccCeEEeeec--cccceeeeeccEEEEeecCCCcEEEEEec---CCeeEEEEcCcccccCCCchhHHHHHHHHHh
Q 025141 23 LTGYRKSCWYEEEIE--ENLRWSFALNSILHTGETRYQDIALLDTK---PFGKALVIDGKLQSAEVDEFIYHESLVHPAL 97 (257)
Q Consensus 23 ~~~~~~~~w~~~~~~--~~~~~~~~~~~il~~~~s~~~~i~v~~~~---~~g~~L~ldG~~~~~~~~~~~y~e~l~~~~l 97 (257)
..+.....||.|..+ ++...++..+++|++.+|+||+|.|++++ .+|+.|++||.+|+++.+++.|++++.++++
T Consensus 11 ~~~~~~~~w~~e~~~~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~p~g~~g~~l~ldg~~~~~~~de~~y~e~l~~~~l 90 (304)
T 3bwc_A 11 GSELISGGWFREENDQWPGQAMSLRVEKVLYDAPTKFQHLTIFESDPKGPWGTVMALDGCIQVTDYDEFVYHEVLGHTSL 90 (304)
T ss_dssp -CCCCTTSEEEECCSSSCSEEEEEEEEEEEEEEECSSSEEEEEEECTTSSCCEEEEETTEEEEETTTHHHHHHHHHHHHH
T ss_pred CCccccCceEEEeccCCCCceEEEecccEEEEeECCCCCEEEEEecCCCccceEEEECCeeeeecccchHHHHHHhhhhh
Confidence 345566789999988 89999999999999999999999999998 7899999999999999999999999999998
Q ss_pred hcCCCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-CCCce
Q 025141 98 LHHPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESY 176 (257)
Q Consensus 98 ~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~-~~~~f 176 (257)
+.++++++||+||||+|.++++++++.+..+|++||+|+.+++.|+++++.....+.++|++++.+|+++++.. ..++|
T Consensus 91 ~~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~f 170 (304)
T 3bwc_A 91 CSHPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTY 170 (304)
T ss_dssp TTSSSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCE
T ss_pred hcCCCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCce
Confidence 88888999999999999999999998666899999999999999999985311113578999999999999876 56889
Q ss_pred eEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhh-CCceEEEeec
Q 025141 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV-FKCGCCALFS 251 (257)
Q Consensus 177 DvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~-F~~v~~~~~~ 251 (257)
|+|++|.+++. .|...|++.+|++. ++++|+|||+++++..++ +......+.+.++|+++ |+.+.++...
T Consensus 171 DvIi~d~~~~~--~~~~~l~~~~~l~~-~~~~LkpgG~lv~~~~~~--~~~~~~~~~~~~~l~~~GF~~v~~~~~~ 241 (304)
T 3bwc_A 171 DVVIIDTTDPA--GPASKLFGEAFYKD-VLRILKPDGICCNQGESI--WLDLELIEKMSRFIRETGFASVQYALMH 241 (304)
T ss_dssp EEEEEECC-----------CCHHHHHH-HHHHEEEEEEEEEEECCT--TTCHHHHHHHHHHHHHHTCSEEEEEECC
T ss_pred eEEEECCCCcc--ccchhhhHHHHHHH-HHHhcCCCcEEEEecCCc--ccchHHHHHHHHHHHhCCCCcEEEEEee
Confidence 99999998765 45568899999999 799999999999998766 56677889999999999 9999988763
No 14
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=100.00 E-value=6.7e-37 Score=268.20 Aligned_cols=200 Identities=16% Similarity=0.221 Sum_probs=179.4
Q ss_pred CeEEeeeccccceeeeeccEEEEeecCCCcEEEEEecCCeeEEEEcCcccccCCCchhHHHHHHHHHhhcCCCCCeEEEE
Q 025141 30 CWYEEEIEENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHPNPKTIFIM 109 (257)
Q Consensus 30 ~w~~~~~~~~~~~~~~~~~il~~~~s~~~~i~v~~~~~~g~~L~ldG~~~~~~~~~~~y~e~l~~~~l~~~~~~~~VL~I 109 (257)
.|++|..+++.+.+++++++|++.+|+||+|.|++++.+|++|++||. |+++.+++.|++++.+++++.++++++||+|
T Consensus 1 ~w~~e~~~~~~~~~~~~~~vl~~~~s~~q~i~v~~~~~~g~~l~ldg~-q~~~~d~~~y~e~l~~~~~~~~~~~~~VL~i 79 (262)
T 2cmg_A 1 MWITQEITPYLRKEYTIEAKLLDVRSEHNILEIFKSKDFGEIAMLNRQ-LLFKNFLHIESELLAHMGGCTKKELKEVLIV 79 (262)
T ss_dssp CEEEEEEETTEEEEEECSEEEEEEECSSCEEEEEEETTTEEEEEETTE-EEEGGGTHHHHHHHHHHHHTTSSCCCEEEEE
T ss_pred CcEEEEcCCCceEEEEEeeEEEeeECCCceEEEEECCCccEEEEEcCc-ccccchHHHHHHHHHHHhhhcCCCCCEEEEE
Confidence 599999999999999999999999999999999999999999999999 9999999999999999999888899999999
Q ss_pred eccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEEEcCCCCCCC
Q 025141 110 GGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDLADPIEG 189 (257)
Q Consensus 110 G~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~D~~~~~~~ 189 (257)
|||+|.++++++++ + .+|++||+|+++++.|+++++.....+.++|++++++|+++++ ++||+|++|+++|.
T Consensus 80 G~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~----~~fD~Ii~d~~dp~-- 151 (262)
T 2cmg_A 80 DGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI----KKYDLIFCLQEPDI-- 151 (262)
T ss_dssp SSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC----CCEEEEEESSCCCH--
T ss_pred eCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH----hhCCEEEECCCChH--
Confidence 99999999999998 6 8999999999999999999863211235789999999999987 78999999975431
Q ss_pred CcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCceEEEee
Q 025141 190 GPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGCCALF 250 (257)
Q Consensus 190 ~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~ 250 (257)
.|++. ++++|+|||+++++.++| +.....+.++.++++++|+++.++..
T Consensus 152 ---------~~~~~-~~~~L~pgG~lv~~~~~~--~~~~~~~~~~~~~l~~~F~~~~~~~~ 200 (262)
T 2cmg_A 152 ---------HRIDG-LKRMLKEDGVFISVAKHP--LLEHVSMQNALKNMGGVFSVAMPFVA 200 (262)
T ss_dssp ---------HHHHH-HHTTEEEEEEEEEEEECT--TTCHHHHHHHHHHHHTTCSEEEEECC
T ss_pred ---------HHHHH-HHHhcCCCcEEEEEcCCc--ccCHHHHHHHHHHHHHhCCceEEEEE
Confidence 38999 799999999999998776 45667889999999999999998876
No 15
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=100.00 E-value=1.3e-35 Score=268.51 Aligned_cols=220 Identities=35% Similarity=0.632 Sum_probs=191.1
Q ss_pred ccccCeEEeee--ccccceeeeeccEEEEeecCCCcEEEEEecCCeeEEEEcCcccccCCCchhHHHHHHHHHhhcCCCC
Q 025141 26 YRKSCWYEEEI--EENLRWSFALNSILHTGETRYQDIALLDTKPFGKALVIDGKLQSAEVDEFIYHESLVHPALLHHPNP 103 (257)
Q Consensus 26 ~~~~~w~~~~~--~~~~~~~~~~~~il~~~~s~~~~i~v~~~~~~g~~L~ldG~~~~~~~~~~~y~e~l~~~~l~~~~~~ 103 (257)
...++||.|.. .++.+.+++++++|++.+|+||+|.|+++..+|+.|++||.+|+++++++.|++++++++++.++++
T Consensus 42 ~~~~~w~~e~~~~~~~~~~~~~v~~vl~~~~s~~q~I~v~~~~~~g~~l~ldg~~~~~~~de~~y~e~L~~l~l~~~~~~ 121 (334)
T 1xj5_A 42 TVIPGWFSEMSPMWPGEAHSLKVEKVLFQGKSDYQDVIVFQSATYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNP 121 (334)
T ss_dssp CCCSSEEEECCTTSTTEEEEEEEEEEEEEEECSSCEEEEEEESSSCEEEEETTEEEEETTTHHHHHHHHHHHHHTTSSCC
T ss_pred ccccceEEEeccCCCCceEEEEeeeEEEEeecCCeEEEEEEcCCCCeEEEECCEeecCcCcchHHHHHHHHHHHhhCCCC
Confidence 44578999885 4899999999999999999999999999999999999999999999999999999999998888889
Q ss_pred CeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcC-CCceeEEEEc
Q 025141 104 KTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR-KESYDVIIGD 182 (257)
Q Consensus 104 ~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~-~~~fDvIi~D 182 (257)
++||+||||+|.++++++++.+..+|++||+|+.+++.|+++++.....+.+++++++.+|+++++... .++||+|++|
T Consensus 122 ~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi~d 201 (334)
T 1xj5_A 122 KKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVD 201 (334)
T ss_dssp CEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEEEC
T ss_pred CEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEEEC
Confidence 999999999999999999986678999999999999999999864211234689999999999998753 4789999999
Q ss_pred CCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCc-eEEEee
Q 025141 183 LADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKC-GCCALF 250 (257)
Q Consensus 183 ~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~F~~-v~~~~~ 250 (257)
++++. .+...+++.+|++. ++++|+|||+++++.+++ |........+.+++++.|+. +..+..
T Consensus 202 ~~~p~--~~~~~l~~~~~l~~-~~~~LkpgG~lv~~~~~~--~~~~~~~~~~~~~l~~~F~~~~~~~~~ 265 (334)
T 1xj5_A 202 SSDPI--GPAKELFEKPFFQS-VARALRPGGVVCTQAESL--WLHMDIIEDIVSNCREIFKGSVNYAWT 265 (334)
T ss_dssp CCCTT--SGGGGGGSHHHHHH-HHHHEEEEEEEEEECCCT--TTCHHHHHHHHHHHHHHCSSCEEEEEE
T ss_pred CCCcc--CcchhhhHHHHHHH-HHHhcCCCcEEEEecCCc--cccHHHHHHHHHHHHHhCccccceEEE
Confidence 98766 34346788999999 799999999999997766 67777788899999999995 444333
No 16
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.98 E-value=8.3e-32 Score=241.13 Aligned_cols=186 Identities=24% Similarity=0.293 Sum_probs=158.1
Q ss_pred cCCCcEEEEEecC--CeeEEEEcCcccccC------CCchhHHHHHHHHHhh---cCCCCC--eEEEEeccchHHHHHHH
Q 025141 55 TRYQDIALLDTKP--FGKALVIDGKLQSAE------VDEFIYHESLVHPALL---HHPNPK--TIFIMGGGEGSTAREIL 121 (257)
Q Consensus 55 s~~~~i~v~~~~~--~g~~L~ldG~~~~~~------~~~~~y~e~l~~~~l~---~~~~~~--~VL~IG~G~G~~~~~l~ 121 (257)
..|...++..... +|++|++||..|+++ .+++.|+++|+|.+++ .+++++ +||+||||+|.++++++
T Consensus 29 ~~~~~~~~~~d~~~~~g~~L~lDG~~Qs~~~l~dP~~le~~Y~e~m~~~~~~l~~~~p~p~~~rVLdIG~G~G~la~~la 108 (317)
T 3gjy_A 29 GEYSVIELEADSYTTDGWLISINGVPSSHIVLGQPQALEFEYMRWIATGARAFIDAHQDASKLRITHLGGGACTMARYFA 108 (317)
T ss_dssp CSSSEEEEEECSSSTTEEEEEETTEEEEEEETTCTTCCCSHHHHHHHHHHHHHHHHHSCGGGCEEEEESCGGGHHHHHHH
T ss_pred ceeeeEEEEecCCCCceEEEEECCEeEEEEECCCCcchhhHHHHHHHHHHHhhcccCCCCCCCEEEEEECCcCHHHHHHH
Confidence 3355578887664 799999999999874 4689999999999887 477766 99999999999999999
Q ss_pred hcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcC-CCceeEEEEcCCCCCCCCcccCCchHHH
Q 025141 122 RHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR-KESYDVIIGDLADPIEGGPCYKLYTKSF 200 (257)
Q Consensus 122 ~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~-~~~fDvIi~D~~~~~~~~p~~~L~t~ef 200 (257)
++.+..+|++||||++++++||++|+.+ .++|++++++|++++++.. .++||+|++|++++. .+..+|++.+|
T Consensus 109 ~~~p~~~v~~VEidp~vi~~Ar~~~~~~----~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~~--~~~~~L~t~ef 182 (317)
T 3gjy_A 109 DVYPQSRNTVVELDAELARLSREWFDIP----RAPRVKIRVDDARMVAESFTPASRDVIIRDVFAGA--ITPQNFTTVEF 182 (317)
T ss_dssp HHSTTCEEEEEESCHHHHHHHHHHSCCC----CTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTTS--CCCGGGSBHHH
T ss_pred HHCCCcEEEEEECCHHHHHHHHHhcccc----CCCceEEEECcHHHHHhhccCCCCCEEEECCCCcc--ccchhhhHHHH
Confidence 9433459999999999999999999765 4789999999999999764 578999999998875 33468999999
Q ss_pred HHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCceEEEee
Q 025141 201 YEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGCCALF 250 (257)
Q Consensus 201 ~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~ 250 (257)
|+. ++++|+|||++++|...+ .....+++++++|+++|+++.+|..
T Consensus 183 l~~-~~r~LkpgGvlv~~~~~~---~~~~~~~~~~~tL~~vF~~v~~~~~ 228 (317)
T 3gjy_A 183 FEH-CHRGLAPGGLYVANCGDH---SDLRGAKSELAGMMEVFEHVAVIAD 228 (317)
T ss_dssp HHH-HHHHEEEEEEEEEEEEEC---TTCHHHHHHHHHHHHHCSEEEEEEC
T ss_pred HHH-HHHhcCCCcEEEEEecCC---cchHHHHHHHHHHHHHCCceEEEEe
Confidence 999 799999999999998643 2346788999999999999999875
No 17
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.60 E-value=1.9e-14 Score=118.39 Aligned_cols=109 Identities=10% Similarity=0.093 Sum_probs=87.0
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcC-CCceeEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR-KESYDVI 179 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~-~~~fDvI 179 (257)
.++++|||+|||+|.++..+++. +..+|+++|+|+.+++.|++++...+ .++++++.+|+.++.... .++||+|
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~~~~~~~~fD~i 117 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR-GAASVLFVESDQRSAAVIARNIEALG----LSGATLRRGAVAAVVAAGTTSPVDLV 117 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEECCHHHHHHHHHHHHHHT----CSCEEEEESCHHHHHHHCCSSCCSEE
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHcC----CCceEEEEccHHHHHhhccCCCccEE
Confidence 46789999999999999988875 45689999999999999999987553 268999999999987643 5789999
Q ss_pred EEcCCCCCCCCcccCCchHHHHHHHHcC--cCCCCcEEEEecC
Q 025141 180 IGDLADPIEGGPCYKLYTKSFYEFVVKP--RLNPEGIFVTQAG 220 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~--~L~pgGil~~~~~ 220 (257)
++|++-.. .. -...++++. +.+ .|+|||++++...
T Consensus 118 ~~~~p~~~--~~---~~~~~~l~~-~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 118 LADPPYNV--DS---ADVDAILAA-LGTNGWTREGTVAVVERA 154 (189)
T ss_dssp EECCCTTS--CH---HHHHHHHHH-HHHSSSCCTTCEEEEEEE
T ss_pred EECCCCCc--ch---hhHHHHHHH-HHhcCccCCCeEEEEEec
Confidence 99976321 10 123467777 676 9999999998763
No 18
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.59 E-value=3.7e-15 Score=127.63 Aligned_cols=121 Identities=10% Similarity=0.078 Sum_probs=92.2
Q ss_pred hhHHHHHHHHHhhcCCCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcch
Q 025141 86 FIYHESLVHPALLHHPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDA 165 (257)
Q Consensus 86 ~~y~e~l~~~~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da 165 (257)
..|.+.+... ..+++.+||+||||+|..+..++++.+ .++++||++|.+++.|++++... ..+++++.+|+
T Consensus 47 ~~~m~~~a~~---~~~~G~rVLdiG~G~G~~~~~~~~~~~-~~v~~id~~~~~~~~a~~~~~~~-----~~~~~~~~~~a 117 (236)
T 3orh_A 47 TPYMHALAAA---ASSKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQ-----THKVIPLKGLW 117 (236)
T ss_dssp HHHHHHHHHH---HTTTCEEEEEECCTTSHHHHHHTTSCE-EEEEEEECCHHHHHHHHHHGGGC-----SSEEEEEESCH
T ss_pred HHHHHHHHHh---hccCCCeEEEECCCccHHHHHHHHhCC-cEEEEEeCCHHHHHHHHHHHhhC-----CCceEEEeehH
Confidence 3455544422 236778999999999999999998754 68999999999999999987643 36889999999
Q ss_pred HHHHhc-CCCceeEEEEcCCCCCCCCcccCCc-hHHHHHHHHcCcCCCCcEEEEe
Q 025141 166 RAELES-RKESYDVIIGDLADPIEGGPCYKLY-TKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 166 ~~~l~~-~~~~fDvIi~D~~~~~~~~p~~~L~-t~ef~~~~~~~~L~pgGil~~~ 218 (257)
.+.+.. ..++||.|+.|..... ....++. ...++++ ++++|||||+|++.
T Consensus 118 ~~~~~~~~~~~FD~i~~D~~~~~--~~~~~~~~~~~~~~e-~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 118 EDVAPTLPDGHFDGILYDTYPLS--EETWHTHQFNFIKNH-AFRLLKPGGVLTYC 169 (236)
T ss_dssp HHHGGGSCTTCEEEEEECCCCCB--GGGTTTHHHHHHHHT-HHHHEEEEEEEEEC
T ss_pred HhhcccccccCCceEEEeeeecc--cchhhhcchhhhhhh-hhheeCCCCEEEEE
Confidence 888755 4578999999986432 1112232 3567888 79999999999863
No 19
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.55 E-value=2.2e-14 Score=121.88 Aligned_cols=103 Identities=16% Similarity=0.223 Sum_probs=85.5
Q ss_pred CeEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcC-CCceeEEEE
Q 025141 104 KTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR-KESYDVIIG 181 (257)
Q Consensus 104 ~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~-~~~fDvIi~ 181 (257)
.+||+||||+|..+..+++. ++..+|++||+++++++.|++++...+ +.+++++++.+|+.+++... .++||+|++
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g--~~~~~i~~~~gda~~~l~~~~~~~fD~V~~ 135 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAG--YSPSRVRFLLSRPLDVMSRLANDSYQLVFG 135 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTT--CCGGGEEEECSCHHHHGGGSCTTCEEEEEE
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCcCcEEEEEcCHHHHHHHhcCCCcCeEEE
Confidence 39999999999999999885 445799999999999999999987543 22268999999999998765 688999999
Q ss_pred cCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 182 D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
|.... ...++++. +.+.|+|||++++.
T Consensus 136 d~~~~---------~~~~~l~~-~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 136 QVSPM---------DLKALVDA-AWPLLRRGGALVLA 162 (221)
T ss_dssp CCCTT---------THHHHHHH-HHHHEEEEEEEEET
T ss_pred cCcHH---------HHHHHHHH-HHHHcCCCcEEEEe
Confidence 96421 12468898 79999999999984
No 20
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.54 E-value=3.2e-14 Score=121.20 Aligned_cols=105 Identities=22% Similarity=0.387 Sum_probs=87.6
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHh-cCCCceeEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELE-SRKESYDVI 179 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~-~~~~~fDvI 179 (257)
.++++||+||||+|..+..+++..+..+|++||+++.+++.|++++...+ ..++++++.+|+.+.+. ...++||+|
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~~fD~V 146 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYH---FENQVRIIEGNALEQFENVNDKVYDMI 146 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTT---CTTTEEEEESCGGGCHHHHTTSCEEEE
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEECCHHHHHHhhccCCccEE
Confidence 36789999999999999999986446799999999999999999987542 23689999999999876 556889999
Q ss_pred EEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
++|.... ...++++. +.+.|+|||++++.
T Consensus 147 ~~~~~~~---------~~~~~l~~-~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 147 FIDAAKA---------QSKKFFEI-YTPLLKHQGLVITD 175 (232)
T ss_dssp EEETTSS---------SHHHHHHH-HGGGEEEEEEEEEE
T ss_pred EEcCcHH---------HHHHHHHH-HHHhcCCCeEEEEe
Confidence 9996421 13578898 79999999999984
No 21
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.53 E-value=1.1e-13 Score=117.35 Aligned_cols=129 Identities=15% Similarity=0.206 Sum_probs=100.0
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc--CCCceeEE
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES--RKESYDVI 179 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~--~~~~fDvI 179 (257)
+...|||||||+|.++..+++..+..+|++||+++.+++.|+++....+ .++++++.+|+.+.+.. ..+.||.|
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~----l~nv~~~~~Da~~~l~~~~~~~~~d~v 109 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEG----LSNLRVMCHDAVEVLHKMIPDNSLRMV 109 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTT----CSSEEEECSCHHHHHHHHSCTTCEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhC----CCcEEEEECCHHHHHHHHcCCCChheE
Confidence 5679999999999999999986555799999999999999999876442 35799999999998763 46789999
Q ss_pred EEcCCCCCCCCc--ccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhh
Q 025141 180 IGDLADPIEGGP--CYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV 241 (257)
Q Consensus 180 i~D~~~~~~~~p--~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~ 241 (257)
++..++|+.... ...+...++++. ++++|+|||++++.+.. ......+...+.+.
T Consensus 110 ~~~~~~p~~~~~~~~rr~~~~~~l~~-~~r~LkpGG~l~i~td~------~~~~~~~~~~~~~~ 166 (218)
T 3dxy_A 110 QLFFPDPWHKARHNKRRIVQVPFAEL-VKSKLQLGGVFHMATDW------EPYAEHMLEVMSSI 166 (218)
T ss_dssp EEESCCCCCSGGGGGGSSCSHHHHHH-HHHHEEEEEEEEEEESC------HHHHHHHHHHHHTS
T ss_pred EEeCCCCccchhhhhhhhhhHHHHHH-HHHHcCCCcEEEEEeCC------HHHHHHHHHHHHhC
Confidence 998777653211 123556789999 79999999999987532 34455666666654
No 22
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.53 E-value=7.4e-14 Score=120.26 Aligned_cols=106 Identities=18% Similarity=0.248 Sum_probs=87.1
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCC--Ccee
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKT-VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRK--ESYD 177 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~--~~fD 177 (257)
.++++||+||||+|..+..+++..+ ..+|++||+++.+++.|++++...+ ..++++++.+|+.+++.... ++||
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g---~~~~v~~~~~d~~~~l~~~~~~~~fD 138 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAG---VDQRVTLREGPALQSLESLGECPAFD 138 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTT---CTTTEEEEESCHHHHHHTCCSCCCCS
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEEcCHHHHHHhcCCCCCeE
Confidence 3578999999999999999998633 5799999999999999999987543 24689999999999887654 4899
Q ss_pred EEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 178 vIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+|++|...+ ....+++. +.+.|+|||++++..
T Consensus 139 ~V~~d~~~~---------~~~~~l~~-~~~~LkpGG~lv~~~ 170 (248)
T 3tfw_A 139 LIFIDADKP---------NNPHYLRW-ALRYSRPGTLIIGDN 170 (248)
T ss_dssp EEEECSCGG---------GHHHHHHH-HHHTCCTTCEEEEEC
T ss_pred EEEECCchH---------HHHHHHHH-HHHhcCCCeEEEEeC
Confidence 999986421 13568888 799999999999753
No 23
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.52 E-value=1.3e-13 Score=116.18 Aligned_cols=108 Identities=12% Similarity=0.177 Sum_probs=85.8
Q ss_pred CCCCeEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCC-----C
Q 025141 101 PNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRK-----E 174 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~-----~ 174 (257)
.++++||+||||+|..+..+++. ++..+|++||+++.+++.|++++...+ ..++++++.+|+.+++.... +
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~l~~~~~~~~~~ 133 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAG---LQDKVTILNGASQDLIPQLKKKYDVD 133 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT---CGGGEEEEESCHHHHGGGTTTTSCCC
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcC---CCCceEEEECCHHHHHHHHHHhcCCC
Confidence 35789999999999999999985 335799999999999999999987543 24589999999999887644 6
Q ss_pred ceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 175 SYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 175 ~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+||+|++|..... ..-..++++. + +.|+|||++++..
T Consensus 134 ~fD~V~~d~~~~~------~~~~~~~~~~-~-~~LkpgG~lv~~~ 170 (221)
T 3u81_A 134 TLDMVFLDHWKDR------YLPDTLLLEK-C-GLLRKGTVLLADN 170 (221)
T ss_dssp CCSEEEECSCGGG------HHHHHHHHHH-T-TCCCTTCEEEESC
T ss_pred ceEEEEEcCCccc------chHHHHHHHh-c-cccCCCeEEEEeC
Confidence 8999999964211 1122366776 5 8999999999864
No 24
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.51 E-value=6.6e-14 Score=120.78 Aligned_cols=105 Identities=17% Similarity=0.151 Sum_probs=86.5
Q ss_pred CCCCeEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcC------C
Q 025141 101 PNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR------K 173 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~------~ 173 (257)
.++++||+||||+|..+..+++. ++..+|+++|+++.+++.|++++...+ ..++++++.+|+.+++... .
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g---~~~~i~~~~gda~~~l~~l~~~~~~~ 154 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAG---VDHKIDFREGPALPVLDEMIKDEKNH 154 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTT---CGGGEEEEESCHHHHHHHHHHSGGGT
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCCeEEEECCHHHHHHHHHhccCCC
Confidence 46789999999999999999886 335799999999999999999987542 2468999999999887542 5
Q ss_pred CceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 174 ESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 174 ~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
++||+|++|.... ....+++. +.+.|+|||++++.
T Consensus 155 ~~fD~V~~d~~~~---------~~~~~l~~-~~~~LkpGG~lv~d 189 (247)
T 1sui_A 155 GSYDFIFVDADKD---------NYLNYHKR-LIDLVKVGGVIGYD 189 (247)
T ss_dssp TCBSEEEECSCST---------THHHHHHH-HHHHBCTTCCEEEE
T ss_pred CCEEEEEEcCchH---------HHHHHHHH-HHHhCCCCeEEEEe
Confidence 7899999996421 13578888 79999999999874
No 25
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.51 E-value=8.4e-14 Score=116.31 Aligned_cols=104 Identities=21% Similarity=0.301 Sum_probs=85.8
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKT-VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvI 179 (257)
.++++||+||||+|..+..+++..+ ..+|+++|+++.+++.|++++...+ ..++++++.+|+.+++....+ ||+|
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~~~-fD~v 130 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNG---LIDRVELQVGDPLGIAAGQRD-IDIL 130 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHS---GGGGEEEEESCHHHHHTTCCS-EEEE
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCC---CCceEEEEEecHHHHhccCCC-CCEE
Confidence 3578999999999999999998633 5799999999999999999986432 236899999999998766556 9999
Q ss_pred EEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
++|... .....+++. +.+.|+|||++++.
T Consensus 131 ~~~~~~---------~~~~~~l~~-~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 131 FMDCDV---------FNGADVLER-MNRCLAKNALLIAV 159 (210)
T ss_dssp EEETTT---------SCHHHHHHH-HGGGEEEEEEEEEE
T ss_pred EEcCCh---------hhhHHHHHH-HHHhcCCCeEEEEE
Confidence 999532 123678898 79999999999984
No 26
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.51 E-value=5.6e-13 Score=108.46 Aligned_cols=132 Identities=17% Similarity=0.219 Sum_probs=100.8
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++++||++|||+|..+..+++. ..+++++|+++.+++.+++++...+ ..+++++++.+|+.+.+. .++||+|+
T Consensus 51 ~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~--~~~~~~~~~~~d~~~~~~--~~~~D~v~ 124 (194)
T 1dus_A 51 DKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNN--LDNYDIRVVHSDLYENVK--DRKYNKII 124 (194)
T ss_dssp CTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTT--CTTSCEEEEECSTTTTCT--TSCEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcC--CCccceEEEECchhcccc--cCCceEEE
Confidence 46689999999999999999987 4699999999999999999886542 122259999999887543 56899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCceEEEee
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGCCALF 250 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~ 250 (257)
++++-.. .. -....+++. +++.|+|||.+++.... ......+.+.+++.|..+..+..
T Consensus 125 ~~~~~~~--~~---~~~~~~l~~-~~~~L~~gG~l~~~~~~------~~~~~~~~~~l~~~~~~~~~~~~ 182 (194)
T 1dus_A 125 TNPPIRA--GK---EVLHRIIEE-GKELLKDNGEIWVVIQT------KQGAKSLAKYMKDVFGNVETVTI 182 (194)
T ss_dssp ECCCSTT--CH---HHHHHHHHH-HHHHEEEEEEEEEEEES------THHHHHHHHHHHHHHSCCEEEEE
T ss_pred ECCCccc--ch---hHHHHHHHH-HHHHcCCCCEEEEEECC------CCChHHHHHHHHHHhcceEEEec
Confidence 9865321 11 123578888 79999999999987532 23345677888888888877655
No 27
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.51 E-value=9.3e-14 Score=116.86 Aligned_cols=105 Identities=17% Similarity=0.248 Sum_probs=85.8
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcC----CCc
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKT-VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR----KES 175 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~----~~~ 175 (257)
.++++||+||||+|..+..+++..+ ..+|+++|+++.+++.|++++...+ ..++++++.+|+.+.+... .++
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~~~~~ 133 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERAN---LNDRVEVRTGLALDSLQQIENEKYEP 133 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEESCHHHHHHHHHHTTCCC
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEEcCHHHHHHHHHhcCCCC
Confidence 3678999999999999999998643 5799999999999999999987543 2468999999999876542 267
Q ss_pred eeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 176 YDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 176 fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
||+|++|...+ ....+++. +.+.|+|||++++.
T Consensus 134 fD~v~~d~~~~---------~~~~~l~~-~~~~L~pgG~lv~~ 166 (223)
T 3duw_A 134 FDFIFIDADKQ---------NNPAYFEW-ALKLSRPGTVIIGD 166 (223)
T ss_dssp CSEEEECSCGG---------GHHHHHHH-HHHTCCTTCEEEEE
T ss_pred cCEEEEcCCcH---------HHHHHHHH-HHHhcCCCcEEEEe
Confidence 99999996521 13578888 79999999999985
No 28
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.50 E-value=7.2e-14 Score=121.28 Aligned_cols=138 Identities=14% Similarity=0.146 Sum_probs=98.8
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhh---ccCCCCCCCeEEEEcchHHHHh------c
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVV---NKEAFSDPRLELVINDARAELE------S 171 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~---~~~~~~~~rv~i~~~Da~~~l~------~ 171 (257)
.++.+|||||||+|.++..+++..+..+|++||+++.+++.|++++.. ++ ...+++++.+|+.++.. .
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~---l~~~v~~~~~D~~~~~~~~~~~~~ 111 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAA---FSARIEVLEADVTLRAKARVEAGL 111 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTT---TGGGEEEEECCTTCCHHHHHHTTC
T ss_pred cCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCC---CcceEEEEeCCHHHHhhhhhhhcc
Confidence 456799999999999999999875557999999999999999999875 42 23479999999988753 1
Q ss_pred CCCceeEEEEcCCCCCC---CCc---------ccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHh
Q 025141 172 RKESYDVIIGDLADPIE---GGP---------CYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLR 239 (257)
Q Consensus 172 ~~~~fDvIi~D~~~~~~---~~p---------~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~ 239 (257)
..++||+|+++++-... ..+ .......++++. +.+.|+|||.+++... ...+.++.+.++
T Consensus 112 ~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~-~~~~LkpgG~l~~~~~-------~~~~~~~~~~l~ 183 (260)
T 2ozv_A 112 PDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRT-ASAIMVSGGQLSLISR-------PQSVAEIIAACG 183 (260)
T ss_dssp CTTCEEEEEECCCC---------------------CCHHHHHHH-HHHHEEEEEEEEEEEC-------GGGHHHHHHHHT
T ss_pred CCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHH-HHHHcCCCCEEEEEEc-------HHHHHHHHHHHH
Confidence 24789999999752110 000 001124578888 7999999999987542 223456777777
Q ss_pred hhCCceEEEe
Q 025141 240 QVFKCGCCAL 249 (257)
Q Consensus 240 ~~F~~v~~~~ 249 (257)
+.|..+....
T Consensus 184 ~~~~~~~i~~ 193 (260)
T 2ozv_A 184 SRFGGLEITL 193 (260)
T ss_dssp TTEEEEEEEE
T ss_pred hcCCceEEEE
Confidence 7665554433
No 29
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.50 E-value=4.4e-14 Score=120.98 Aligned_cols=105 Identities=19% Similarity=0.196 Sum_probs=86.8
Q ss_pred CCCCeEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcC------C
Q 025141 101 PNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR------K 173 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~------~ 173 (257)
.++++||+||||+|..+..+++. ++..+|+++|+++.+++.|++++...+ ..++++++.+|+.+++... .
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g---~~~~i~~~~gda~~~l~~l~~~~~~~ 145 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAG---VEHKINFIESDAMLALDNLLQGQESE 145 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT---CGGGEEEEESCHHHHHHHHHHSTTCT
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEEcCHHHHHHHHHhccCCC
Confidence 46789999999999999999986 435799999999999999999987542 2468999999999987643 4
Q ss_pred CceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 174 ESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 174 ~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
++||+|++|...+ ...++++. +.+.|+|||++++.
T Consensus 146 ~~fD~I~~d~~~~---------~~~~~l~~-~~~~L~pGG~lv~d 180 (237)
T 3c3y_A 146 GSYDFGFVDADKP---------NYIKYHER-LMKLVKVGGIVAYD 180 (237)
T ss_dssp TCEEEEEECSCGG---------GHHHHHHH-HHHHEEEEEEEEEE
T ss_pred CCcCEEEECCchH---------HHHHHHHH-HHHhcCCCeEEEEe
Confidence 7899999995321 13678898 79999999999985
No 30
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.50 E-value=4.1e-13 Score=112.55 Aligned_cols=135 Identities=16% Similarity=0.200 Sum_probs=100.4
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHh-cCCCceeEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELE-SRKESYDVI 179 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~-~~~~~fDvI 179 (257)
.+..+|||||||+|.++..+++..+..++++||+++.+++.|++++...+ -++++++.+|+.++.. -..++||+|
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~----~~~v~~~~~d~~~~~~~~~~~~~D~i 115 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVG----VPNIKLLWVDGSDLTDYFEDGEIDRL 115 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHC----CSSEEEEECCSSCGGGTSCTTCCSEE
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcC----CCCEEEEeCCHHHHHhhcCCCCCCEE
Confidence 45679999999999999999887555799999999999999999886542 2689999999987432 234689999
Q ss_pred EEcCCCCCCCCc--ccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhh-CCceE
Q 025141 180 IGDLADPIEGGP--CYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV-FKCGC 246 (257)
Q Consensus 180 i~D~~~~~~~~p--~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~-F~~v~ 246 (257)
+++.++++.... ...+...++++. ++++|+|||++++.... ......+.+.+++. |..+.
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~LkpgG~l~~~~~~------~~~~~~~~~~~~~~g~~~~~ 178 (214)
T 1yzh_A 116 YLNFSDPWPKKRHEKRRLTYKTFLDT-FKRILPENGEIHFKTDN------RGLFEYSLVSFSQYGMKLNG 178 (214)
T ss_dssp EEESCCCCCSGGGGGGSTTSHHHHHH-HHHHSCTTCEEEEEESC------HHHHHHHHHHHHHHTCEEEE
T ss_pred EEECCCCccccchhhhccCCHHHHHH-HHHHcCCCcEEEEEeCC------HHHHHHHHHHHHHCCCeeee
Confidence 999877652110 113445789999 79999999999987532 33445666666654 44333
No 31
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.49 E-value=6.8e-13 Score=107.08 Aligned_cols=122 Identities=24% Similarity=0.207 Sum_probs=92.1
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++.+|||||||+|.++..+++..+..+|+++|+++.+++.|++++...+ ...++ ++.+|+.+.+....++||+|+
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~~-~~~~d~~~~~~~~~~~~D~i~ 99 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLG---VSDRI-AVQQGAPRAFDDVPDNPDVIF 99 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTT---CTTSE-EEECCTTGGGGGCCSCCSEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhC---CCCCE-EEecchHhhhhccCCCCCEEE
Confidence 45679999999999999999987556799999999999999999886442 23478 888998777765557899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCC
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFK 243 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~F~ 243 (257)
++...+. ..+++. +.+.|+|||.+++.... ......+.+.+++...
T Consensus 100 ~~~~~~~----------~~~l~~-~~~~L~~gG~l~~~~~~------~~~~~~~~~~~~~~~~ 145 (178)
T 3hm2_A 100 IGGGLTA----------PGVFAA-AWKRLPVGGRLVANAVT------VESEQMLWALRKQFGG 145 (178)
T ss_dssp ECC-TTC----------TTHHHH-HHHTCCTTCEEEEEECS------HHHHHHHHHHHHHHCC
T ss_pred ECCcccH----------HHHHHH-HHHhcCCCCEEEEEeec------cccHHHHHHHHHHcCC
Confidence 8754321 467888 79999999999987532 3334455555665543
No 32
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.49 E-value=7.6e-13 Score=109.87 Aligned_cols=120 Identities=16% Similarity=0.161 Sum_probs=94.9
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++.+|||||||+|..+..+++..+..+|+++|+++.+++.|++++...+ .++++++.+|+.+.+... ++||+|+
T Consensus 39 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~~~~-~~~D~i~ 113 (204)
T 3e05_A 39 QDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFV----ARNVTLVEAFAPEGLDDL-PDPDRVF 113 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHT----CTTEEEEECCTTTTCTTS-CCCSEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhC----CCcEEEEeCChhhhhhcC-CCCCEEE
Confidence 45689999999999999999987656799999999999999999987542 268999999987765432 6799999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhh
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV 241 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~ 241 (257)
++...+ ...++++. +.+.|+|||++++... .......+.+.+++.
T Consensus 114 ~~~~~~---------~~~~~l~~-~~~~LkpgG~l~~~~~------~~~~~~~~~~~l~~~ 158 (204)
T 3e05_A 114 IGGSGG---------MLEEIIDA-VDRRLKSEGVIVLNAV------TLDTLTKAVEFLEDH 158 (204)
T ss_dssp ESCCTT---------CHHHHHHH-HHHHCCTTCEEEEEEC------BHHHHHHHHHHHHHT
T ss_pred ECCCCc---------CHHHHHHH-HHHhcCCCeEEEEEec------ccccHHHHHHHHHHC
Confidence 986532 23578888 7999999999998642 234455666777665
No 33
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.49 E-value=1e-13 Score=112.37 Aligned_cols=110 Identities=15% Similarity=0.214 Sum_probs=87.4
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++++|||+|||+|..+..+++. +..+|+++|+++.+++.|++++...+ ..++++++.+|+.+++....++||+|+
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~fD~i~ 105 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTK---AENRFTLLKMEAERAIDCLTGRFDLVF 105 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTT---CGGGEEEECSCHHHHHHHBCSCEEEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcC---CCCceEEEECcHHHhHHhhcCCCCEEE
Confidence 46789999999999999999986 45699999999999999999886542 235899999999998766567799999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHc--CcCCCCcEEEEecCCC
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVK--PRLNPEGIFVTQAGPA 222 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~--~~L~pgGil~~~~~~~ 222 (257)
+|++-. .....++++. +. +.|+|||++++.....
T Consensus 106 ~~~~~~-------~~~~~~~~~~-l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 106 LDPPYA-------KETIVATIEA-LAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp ECCSSH-------HHHHHHHHHH-HHHTTCEEEEEEEEEEEETT
T ss_pred ECCCCC-------cchHHHHHHH-HHhCCCcCCCcEEEEEECCc
Confidence 986421 1123566777 55 8999999999876443
No 34
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.48 E-value=1.1e-13 Score=116.40 Aligned_cols=104 Identities=21% Similarity=0.286 Sum_probs=85.2
Q ss_pred CCCeEEEEeccchHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCC-----Cc
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKT-VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRK-----ES 175 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~-----~~ 175 (257)
++++||+||||+|..+..+++..+ ..+|+++|+++.+++.|++++...+ ..++++++.+|+.+.+.... ++
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~~~~~~ 140 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAG---LSDKIGLRLSPAKDTLAELIHAGQAWQ 140 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEESCHHHHHHHHHTTTCTTC
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCC---CCCceEEEeCCHHHHHHHhhhccCCCC
Confidence 568999999999999999998632 5799999999999999999986543 24679999999998875432 78
Q ss_pred eeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 176 YDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 176 fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
||+|++|+... ....+++. +.+.|+|||++++.
T Consensus 141 fD~v~~~~~~~---------~~~~~l~~-~~~~L~pgG~lv~~ 173 (225)
T 3tr6_A 141 YDLIYIDADKA---------NTDLYYEE-SLKLLREGGLIAVD 173 (225)
T ss_dssp EEEEEECSCGG---------GHHHHHHH-HHHHEEEEEEEEEE
T ss_pred ccEEEECCCHH---------HHHHHHHH-HHHhcCCCcEEEEe
Confidence 99999986421 13568888 79999999999875
No 35
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.47 E-value=7.9e-13 Score=111.24 Aligned_cols=130 Identities=10% Similarity=0.114 Sum_probs=98.1
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHh-cCCCceeEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELE-SRKESYDVI 179 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~-~~~~~fDvI 179 (257)
.+..+|||||||+|.++..+++..+..++++||+++.+++.|++++...+ .++++++.+|+.++.. -..+.||.|
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~----~~nv~~~~~d~~~l~~~~~~~~~d~v 112 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSE----AQNVKLLNIDADTLTDVFEPGEVKRV 112 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSC----CSSEEEECCCGGGHHHHCCTTSCCEE
T ss_pred CCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcC----CCCEEEEeCCHHHHHhhcCcCCcCEE
Confidence 45678999999999999999886555799999999999999999876442 3579999999988532 234679999
Q ss_pred EEcCCCCCCCCc--ccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhh
Q 025141 180 IGDLADPIEGGP--CYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV 241 (257)
Q Consensus 180 i~D~~~~~~~~p--~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~ 241 (257)
++..++|+.... ...+....+++. ++++|+|||.+++.+. .......+...+.+.
T Consensus 113 ~~~~~~p~~~~~~~~~rl~~~~~l~~-~~~~LkpgG~l~~~td------~~~~~~~~~~~~~~~ 169 (213)
T 2fca_A 113 YLNFSDPWPKKRHEKRRLTYSHFLKK-YEEVMGKGGSIHFKTD------NRGLFEYSLKSFSEY 169 (213)
T ss_dssp EEESCCCCCSGGGGGGSTTSHHHHHH-HHHHHTTSCEEEEEES------CHHHHHHHHHHHHHH
T ss_pred EEECCCCCcCccccccccCcHHHHHH-HHHHcCCCCEEEEEeC------CHHHHHHHHHHHHHC
Confidence 998777653111 123556789999 7999999999998653 234445556666654
No 36
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.47 E-value=2.9e-14 Score=122.65 Aligned_cols=105 Identities=21% Similarity=0.352 Sum_probs=86.6
Q ss_pred CCCCeEEEEeccchHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcC-----CC
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR-----KE 174 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~-----~~ 174 (257)
.++++||+||||+|..+..+++.. +..+|++||+++++++.|++++...+ ..++++++.+|+.+.+... .+
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g---~~~~i~~~~gda~~~l~~~~~~~~~~ 135 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAK---QEHKIKLRLGPALDTLHSLLNEGGEH 135 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTT---CTTTEEEEESCHHHHHHHHHHHHCSS
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEEcCHHHHHHHHhhccCCC
Confidence 367899999999999999999853 35799999999999999999987543 3469999999999987653 57
Q ss_pred ceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 175 SYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 175 ~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
+||+|++|.... ....+++. +.+.|+|||++++.
T Consensus 136 ~fD~V~~d~~~~---------~~~~~l~~-~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 136 QFDFIFIDADKT---------NYLNYYEL-ALKLVTPKGLIAID 169 (242)
T ss_dssp CEEEEEEESCGG---------GHHHHHHH-HHHHEEEEEEEEEE
T ss_pred CEeEEEEcCChH---------HhHHHHHH-HHHhcCCCeEEEEE
Confidence 899999996411 13568888 79999999999984
No 37
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.47 E-value=4e-13 Score=112.07 Aligned_cols=106 Identities=14% Similarity=0.131 Sum_probs=84.0
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~ 181 (257)
+.++|||+|||+|.++..+++.. ..+|++||+++.+++.|++++...+ -++++++.+|+.+++....++||+|++
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~-~~~V~~vD~s~~~l~~a~~~~~~~~----~~~v~~~~~D~~~~~~~~~~~fD~V~~ 128 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY-AAGATLIEMDRAVSQQLIKNLATLK----AGNARVVNSNAMSFLAQKGTPHNIVFV 128 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTT----CCSEEEECSCHHHHHSSCCCCEEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC-CCEEEEEECCHHHHHHHHHHHHHcC----CCcEEEEECCHHHHHhhcCCCCCEEEE
Confidence 56799999999999999877753 4699999999999999999987542 268999999999988765678999999
Q ss_pred cCCCCCCCCcccCCchHHHHHHHHc--CcCCCCcEEEEecC
Q 025141 182 DLADPIEGGPCYKLYTKSFYEFVVK--PRLNPEGIFVTQAG 220 (257)
Q Consensus 182 D~~~~~~~~p~~~L~t~ef~~~~~~--~~L~pgGil~~~~~ 220 (257)
|++-.. . ...++++. +. +.|+|||++++...
T Consensus 129 ~~p~~~--~-----~~~~~l~~-l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 129 DPPFRR--G-----LLEETINL-LEDNGWLADEALIYVESE 161 (202)
T ss_dssp CCSSST--T-----THHHHHHH-HHHTTCEEEEEEEEEEEE
T ss_pred CCCCCC--C-----cHHHHHHH-HHhcCccCCCcEEEEEEC
Confidence 976211 1 12456666 54 46999999988754
No 38
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.47 E-value=3.5e-13 Score=112.37 Aligned_cols=109 Identities=18% Similarity=0.239 Sum_probs=84.9
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-CCCc-eeEE
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKES-YDVI 179 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~-~~~~-fDvI 179 (257)
++++|||+|||+|.++..+++.. ..+|++||+|+.+++.|++++...+ +..++++++.+|+.+++.. ..++ ||+|
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~~~fD~I 129 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQ-AKKVTFLELDKTVANQLKKNLQTLK--CSSEQAEVINQSSLDFLKQPQNQPHFDVV 129 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTT--CCTTTEEEECSCHHHHTTSCCSSCCEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHHhC--CCccceEEEECCHHHHHHhhccCCCCCEE
Confidence 56799999999999999877753 4699999999999999999987542 1126899999999998754 2567 9999
Q ss_pred EEcCCCCCCCCcccCCchHHHHHHHH--cCcCCCCcEEEEecCC
Q 025141 180 IGDLADPIEGGPCYKLYTKSFYEFVV--KPRLNPEGIFVTQAGP 221 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~--~~~L~pgGil~~~~~~ 221 (257)
++|++-.. . ...++++. + .+.|+|||++++...+
T Consensus 130 ~~~~~~~~--~-----~~~~~l~~-~~~~~~LkpgG~l~i~~~~ 165 (201)
T 2ift_A 130 FLDPPFHF--N-----LAEQAISL-LCENNWLKPNALIYVETEK 165 (201)
T ss_dssp EECCCSSS--C-----HHHHHHHH-HHHTTCEEEEEEEEEEEES
T ss_pred EECCCCCC--c-----cHHHHHHH-HHhcCccCCCcEEEEEECC
Confidence 99976211 1 13466777 6 5789999999987643
No 39
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.47 E-value=3.2e-13 Score=119.52 Aligned_cols=103 Identities=10% Similarity=0.158 Sum_probs=81.8
Q ss_pred cCCCCCeEEEEeccchHHH-HHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCcee
Q 025141 99 HHPNPKTIFIMGGGEGSTA-REILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYD 177 (257)
Q Consensus 99 ~~~~~~~VL~IG~G~G~~~-~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fD 177 (257)
...++++||+||||+|.++ ..+++.+ ..+|++||+|+++++.||+++...+ . .+++++.+|+.++- .++||
T Consensus 119 ~l~~g~rVLDIGcG~G~~ta~~lA~~~-ga~V~gIDis~~~l~~Ar~~~~~~g---l-~~v~~v~gDa~~l~---d~~FD 190 (298)
T 3fpf_A 119 RFRRGERAVFIGGGPLPLTGILLSHVY-GMRVNVVEIEPDIAELSRKVIEGLG---V-DGVNVITGDETVID---GLEFD 190 (298)
T ss_dssp TCCTTCEEEEECCCSSCHHHHHHHHTT-CCEEEEEESSHHHHHHHHHHHHHHT---C-CSEEEEESCGGGGG---GCCCS
T ss_pred CCCCcCEEEEECCCccHHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHhcC---C-CCeEEEECchhhCC---CCCcC
Confidence 3456899999999988765 4445544 4799999999999999999987543 2 69999999998852 57899
Q ss_pred EEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 178 vIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+|+++...+ . ..+++++ +.++|||||++++..
T Consensus 191 vV~~~a~~~---d------~~~~l~e-l~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 191 VLMVAALAE---P------KRRVFRN-IHRYVDTETRIIYRT 222 (298)
T ss_dssp EEEECTTCS---C------HHHHHHH-HHHHCCTTCEEEEEE
T ss_pred EEEECCCcc---C------HHHHHHH-HHHHcCCCcEEEEEc
Confidence 999875421 1 3578898 799999999999875
No 40
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.46 E-value=1.1e-13 Score=114.56 Aligned_cols=139 Identities=13% Similarity=0.101 Sum_probs=81.5
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc---CCCcee
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES---RKESYD 177 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~---~~~~fD 177 (257)
.++++|||+|||+|..+..+++..+..+++++|+++.+++.|++++...+ . +++++.+|+.+.+.. ..++||
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~----~-~~~~~~~d~~~~~~~~~~~~~~fD 103 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFG----A-VVDWAAADGIEWLIERAERGRPWH 103 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC------------------------CCHHHHHHHHHHHHHTTCCBS
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhC----C-ceEEEEcchHhhhhhhhhccCccc
Confidence 56789999999999999999997555699999999999999999886542 2 789999999997654 347899
Q ss_pred EEEEcCCCCCCCC------------cccCCc--------hHHHHHHHHcCcCCCCcE-EEEecCCCCCCCChHHHHHHHH
Q 025141 178 VIIGDLADPIEGG------------PCYKLY--------TKSFYEFVVKPRLNPEGI-FVTQAGPAGIFSHTEVFSCIYN 236 (257)
Q Consensus 178 vIi~D~~~~~~~~------------p~~~L~--------t~ef~~~~~~~~L~pgGi-l~~~~~~~~~~~~~~~~~~~~~ 236 (257)
+|++|++-..... |...+. -..+++. +++.|+|||+ +++... ......+..+++
T Consensus 104 ~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~LkpgG~l~~~~~~----~~~~~~~~~~l~ 178 (215)
T 4dzr_A 104 AIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAAL-PPYVLARGRAGVFLEVG----HNQADEVARLFA 178 (215)
T ss_dssp EEEECCCCCC------------------------CTTHHHHHHHTC-CGGGBCSSSEEEEEECT----TSCHHHHHHHTG
T ss_pred EEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHH-HHHHhcCCCeEEEEEEC----CccHHHHHHHHH
Confidence 9999976311000 000000 0677888 7999999999 666543 233444444444
Q ss_pred HHhhhCCceEEEe
Q 025141 237 TLRQVFKCGCCAL 249 (257)
Q Consensus 237 ~l~~~F~~v~~~~ 249 (257)
.++.-|..+..+.
T Consensus 179 ~~~~gf~~~~~~~ 191 (215)
T 4dzr_A 179 PWRERGFRVRKVK 191 (215)
T ss_dssp GGGGGTEECCEEE
T ss_pred HhhcCCceEEEEE
Confidence 3344566655544
No 41
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.46 E-value=2.4e-13 Score=110.66 Aligned_cols=109 Identities=18% Similarity=0.215 Sum_probs=85.0
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc---CCCcee
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES---RKESYD 177 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~---~~~~fD 177 (257)
.++++|||+|||+|..+..+++. +..+|+++|+++.+++.|++++...+ ..++++++.+|+.+++.. ..++||
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~fD 118 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSR-GMDKSICIEKNFAALKVIKENIAITK---EPEKFEVRKMDANRALEQFYEEKLQFD 118 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHT---CGGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred cCCCCEEEeCCccCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHhC---CCcceEEEECcHHHHHHHHHhcCCCCC
Confidence 35689999999999999988885 44699999999999999999987542 235899999999997653 257899
Q ss_pred EEEEcCCCCCCCCcccCCchHHHHHHHH--cCcCCCCcEEEEecCC
Q 025141 178 VIIGDLADPIEGGPCYKLYTKSFYEFVV--KPRLNPEGIFVTQAGP 221 (257)
Q Consensus 178 vIi~D~~~~~~~~p~~~L~t~ef~~~~~--~~~L~pgGil~~~~~~ 221 (257)
+|++|++-.. ....+.++. + .++|+|||++++....
T Consensus 119 ~i~~~~~~~~-------~~~~~~~~~-l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 119 LVLLDPPYAK-------QEIVSQLEK-MLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp EEEECCCGGG-------CCHHHHHHH-HHHTTCEEEEEEEEEEEET
T ss_pred EEEECCCCCc-------hhHHHHHHH-HHHhcccCCCCEEEEEeCC
Confidence 9999975211 112455565 5 7899999999987643
No 42
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.46 E-value=5.6e-13 Score=115.19 Aligned_cols=128 Identities=15% Similarity=0.157 Sum_probs=93.4
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcC-CCceeEEE
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR-KESYDVII 180 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~-~~~fDvIi 180 (257)
++.+|||+|||+|.++..+++..+ .+|++||+++.+++.|++++..++ ...+++++.+|+.++.... .++||+|+
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~-~~v~gvDi~~~~~~~a~~n~~~~~---~~~~v~~~~~D~~~~~~~~~~~~fD~Ii 124 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTK-AKIVGVEIQERLADMAKRSVAYNQ---LEDQIEIIEYDLKKITDLIPKERADIVT 124 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCC-CEEEEECCSHHHHHHHHHHHHHTT---CTTTEEEECSCGGGGGGTSCTTCEEEEE
T ss_pred CCCEEEEcCCchhHHHHHHHHhcC-CcEEEEECCHHHHHHHHHHHHHCC---CcccEEEEECcHHHhhhhhccCCccEEE
Confidence 578999999999999999998754 499999999999999999987653 2458999999999987533 57899999
Q ss_pred EcCCCCCC-----CCcc--c-------CCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhh
Q 025141 181 GDLADPIE-----GGPC--Y-------KLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV 241 (257)
Q Consensus 181 ~D~~~~~~-----~~p~--~-------~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~ 241 (257)
+|++-... ..+. . .....++++. +.+.|+|||++++-.. + ....++...+++.
T Consensus 125 ~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~-~~~~LkpgG~l~~~~~-~------~~~~~~~~~l~~~ 191 (259)
T 3lpm_A 125 CNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRV-AASLLKQGGKANFVHR-P------ERLLDIIDIMRKY 191 (259)
T ss_dssp ECCCC-----------------------HHHHHHHHH-HHHHEEEEEEEEEEEC-T------TTHHHHHHHHHHT
T ss_pred ECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHH-HHHHccCCcEEEEEEc-H------HHHHHHHHHHHHC
Confidence 99762110 0000 0 0112468888 7999999999998432 1 2244566666653
No 43
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.45 E-value=8.4e-13 Score=111.37 Aligned_cols=137 Identities=15% Similarity=0.104 Sum_probs=97.6
Q ss_pred CCCCeEEEEecc-chHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025141 101 PNPKTIFIMGGG-EGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (257)
Q Consensus 101 ~~~~~VL~IG~G-~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvI 179 (257)
.++++|||+||| +|.++..+++.. ..+|+++|+++.+++.|++++..++ .+++++.+|+..+.....++||+|
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~-----~~v~~~~~d~~~~~~~~~~~fD~I 127 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNN-----SNVRLVKSNGGIIKGVVEGTFDVI 127 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTT-----CCCEEEECSSCSSTTTCCSCEEEE
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhC-----CCcEEEeCCchhhhhcccCceeEE
Confidence 467899999999 999999998864 3699999999999999999987653 289999999754433334789999
Q ss_pred EEcCCCCCCC-----Cc--------ccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCceE
Q 025141 180 IGDLADPIEG-----GP--------CYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGC 246 (257)
Q Consensus 180 i~D~~~~~~~-----~p--------~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~F~~v~ 246 (257)
+++++-.... .+ ...-....+++. +.+.|+|||.+++... ........+.+.+++..-.+.
T Consensus 128 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~LkpgG~l~~~~~-----~~~~~~~~~~~~l~~~g~~~~ 201 (230)
T 3evz_A 128 FSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEE-AFDHLNPGGKVALYLP-----DKEKLLNVIKERGIKLGYSVK 201 (230)
T ss_dssp EECCCCC---------------CCSSSCHHHHHHHHH-HGGGEEEEEEEEEEEE-----SCHHHHHHHHHHHHHTTCEEE
T ss_pred EECCCCcCCccccccChhhhhccCccchHHHHHHHHH-HHHHhCCCeEEEEEec-----ccHhHHHHHHHHHHHcCCceE
Confidence 9997621100 00 000112678998 7999999999988542 123456677777777643444
Q ss_pred EEe
Q 025141 247 CAL 249 (257)
Q Consensus 247 ~~~ 249 (257)
...
T Consensus 202 ~~~ 204 (230)
T 3evz_A 202 DIK 204 (230)
T ss_dssp EEE
T ss_pred EEE
Confidence 433
No 44
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.45 E-value=9e-14 Score=121.88 Aligned_cols=130 Identities=15% Similarity=0.040 Sum_probs=97.4
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.+.++|||+|||+|.++..+++... .+|+++|+++.+++.|++++..++ ...+++++.+|+.++.. .++||+|+
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~-~~V~~vD~s~~~~~~a~~n~~~n~---~~~~v~~~~~D~~~~~~--~~~fD~Vi 197 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGK-AKVIAIEKDPYTFKFLVENIHLNK---VEDRMSAYNMDNRDFPG--ENIADRIL 197 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTC-CEEEEECCCHHHHHHHHHHHHHTT---CTTTEEEECSCTTTCCC--CSCEEEEE
T ss_pred CCCCEEEEecccCCHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHHcC---CCceEEEEECCHHHhcc--cCCccEEE
Confidence 4578999999999999999998743 389999999999999999987664 23579999999998875 67899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCceEE
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGCC 247 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~ 247 (257)
+|++.. ..++++. +.+.|+|||++++....+........+..+.+.+++..-.+..
T Consensus 198 ~~~p~~----------~~~~l~~-~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 198 MGYVVR----------THEFIPK-ALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp ECCCSS----------GGGGHHH-HHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEE
T ss_pred ECCchh----------HHHHHHH-HHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEE
Confidence 987521 1356777 6889999999998654321112234455666667765444443
No 45
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.45 E-value=1.1e-12 Score=107.09 Aligned_cols=112 Identities=16% Similarity=0.086 Sum_probs=82.2
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
++..+|||+|||+|..+..+++. ..+|+++|+++.+++.|++++...+ -++++++.+|........+++||+|+
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~----~~~v~~~~~~~~~l~~~~~~~fD~v~ 94 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLG----IENTELILDGHENLDHYVREPIRAAI 94 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHT----CCCEEEEESCGGGGGGTCCSCEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcC----CCcEEEEeCcHHHHHhhccCCcCEEE
Confidence 45689999999999999999987 4699999999999999999987542 26899999887664333467899999
Q ss_pred EcCC-CCCCCCcc--cCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 181 GDLA-DPIEGGPC--YKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 181 ~D~~-~~~~~~p~--~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+++. -+...... ..-....+++. +.+.|+|||.+++..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~LkpgG~l~i~~ 135 (185)
T 3mti_A 95 FNLGYLPSADKSVITKPHTTLEAIEK-ILDRLEVGGRLAIMI 135 (185)
T ss_dssp EEEC-----------CHHHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EeCCCCCCcchhcccChhhHHHHHHH-HHHhcCCCcEEEEEE
Confidence 9842 22100000 00113467788 789999999988754
No 46
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.44 E-value=1.1e-12 Score=112.50 Aligned_cols=128 Identities=20% Similarity=0.249 Sum_probs=98.4
Q ss_pred CCCCCeEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeE
Q 025141 100 HPNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDV 178 (257)
Q Consensus 100 ~~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDv 178 (257)
..++++|||+|||+|.++..+++. .+..+|+++|+++.+++.|++++...+ ...+++++.+|+.+.+ ..++||+
T Consensus 91 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~--~~~~~D~ 165 (255)
T 3mb5_A 91 ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAG---FDDRVTIKLKDIYEGI--EEENVDH 165 (255)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHT---CTTTEEEECSCGGGCC--CCCSEEE
T ss_pred CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcC---CCCceEEEECchhhcc--CCCCcCE
Confidence 345689999999999999999987 545799999999999999999986542 2356999999998764 2467999
Q ss_pred EEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhh---CCceEEEee
Q 025141 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV---FKCGCCALF 250 (257)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~---F~~v~~~~~ 250 (257)
|++|++++ .++++. +.+.|+|||.+++... .......+.+.+++. |..+..+..
T Consensus 166 v~~~~~~~-----------~~~l~~-~~~~L~~gG~l~~~~~------~~~~~~~~~~~l~~~g~~f~~~~~~e~ 222 (255)
T 3mb5_A 166 VILDLPQP-----------ERVVEH-AAKALKPGGFFVAYTP------CSNQVMRLHEKLREFKDYFMKPRTINV 222 (255)
T ss_dssp EEECSSCG-----------GGGHHH-HHHHEEEEEEEEEEES------SHHHHHHHHHHHHHTGGGBSCCEEECC
T ss_pred EEECCCCH-----------HHHHHH-HHHHcCCCCEEEEEEC------CHHHHHHHHHHHHHcCCCccccEEEEE
Confidence 99987643 245677 6899999999998642 234455667777765 777766543
No 47
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.44 E-value=5.7e-13 Score=115.94 Aligned_cols=108 Identities=16% Similarity=0.262 Sum_probs=82.4
Q ss_pred CCCCCeEEEEeccchHHHHHHHhcC--CCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCcee
Q 025141 100 HPNPKTIFIMGGGEGSTAREILRHK--TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYD 177 (257)
Q Consensus 100 ~~~~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fD 177 (257)
.++..+|||||||+|..+..+++.. +..+|++||+++.+++.||+++...+ ...+++++.+|+.++ ..+.||
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~---~~~~v~~~~~D~~~~---~~~~~d 141 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYK---APTPVDVIEGDIRDI---AIENAS 141 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSC---CSSCEEEEESCTTTC---CCCSEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhc---cCceEEEeecccccc---cccccc
Confidence 4567899999999999999998752 34589999999999999999876432 346899999998664 236799
Q ss_pred EEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 178 vIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
+|++...-... .+ .....++++ +++.|||||++++.
T Consensus 142 ~v~~~~~l~~~-~~---~~~~~~l~~-i~~~LkpGG~lii~ 177 (261)
T 4gek_A 142 MVVLNFTLQFL-EP---SERQALLDK-IYQGLNPGGALVLS 177 (261)
T ss_dssp EEEEESCGGGS-CH---HHHHHHHHH-HHHHEEEEEEEEEE
T ss_pred cceeeeeeeec-Cc---hhHhHHHHH-HHHHcCCCcEEEEE
Confidence 99987542221 11 112357898 79999999999874
No 48
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.44 E-value=8.8e-13 Score=112.60 Aligned_cols=121 Identities=17% Similarity=0.189 Sum_probs=91.9
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc--CCCceeEE
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES--RKESYDVI 179 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~--~~~~fDvI 179 (257)
++.+|||||||+|..+..++...+..+|++||+++.+++.|++++...+ .++++++.+|+.++... ..++||+|
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~~~~~~~~~fD~V 145 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQ----LENTTFCHDRAETFGQRKDVRESYDIV 145 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHT----CSSEEEEESCHHHHTTCTTTTTCEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC----CCCEEEEeccHHHhcccccccCCccEE
Confidence 5689999999999999888864445799999999999999999886542 24699999999886532 24789999
Q ss_pred EEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhh
Q 025141 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV 241 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~ 241 (257)
+++... . ...+++. +.+.|+|||++++..+.. .......+.+.+++.
T Consensus 146 ~~~~~~----~------~~~~l~~-~~~~LkpgG~l~~~~g~~----~~~~~~~~~~~l~~~ 192 (240)
T 1xdz_A 146 TARAVA----R------LSVLSEL-CLPLVKKNGLFVALKAAS----AEEELNAGKKAITTL 192 (240)
T ss_dssp EEECCS----C------HHHHHHH-HGGGEEEEEEEEEEECC-----CHHHHHHHHHHHHHT
T ss_pred EEeccC----C------HHHHHHH-HHHhcCCCCEEEEEeCCC----chHHHHHHHHHHHHc
Confidence 997631 1 2578888 799999999998865432 234455566666654
No 49
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.43 E-value=6e-13 Score=106.56 Aligned_cols=105 Identities=14% Similarity=0.103 Sum_probs=83.2
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcC---CCceeE
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR---KESYDV 178 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~---~~~fDv 178 (257)
++++|||+|||+|..+..+++.. .+|+++|+++.+++.|++++...+ . +++++.+|+.+++... .++||+
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~----~-~~~~~~~d~~~~~~~~~~~~~~~D~ 113 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEG--WEAVLVEKDPEAVRLLKENVRRTG----L-GARVVALPVEVFLPEAKAQGERFTV 113 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTT--CEEEEECCCHHHHHHHHHHHHHHT----C-CCEEECSCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCC--CeEEEEeCCHHHHHHHHHHHHHcC----C-ceEEEeccHHHHHHhhhccCCceEE
Confidence 66899999999999999999864 359999999999999999987552 2 8999999999876432 348999
Q ss_pred EEEcCCCCCCCCcccCCchHHHHHHHHc--CcCCCCcEEEEecCCC
Q 025141 179 IIGDLADPIEGGPCYKLYTKSFYEFVVK--PRLNPEGIFVTQAGPA 222 (257)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~--~~L~pgGil~~~~~~~ 222 (257)
|+++++-.. ...++++. +. +.|+|||++++...+.
T Consensus 114 i~~~~~~~~--------~~~~~~~~-~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 114 AFMAPPYAM--------DLAALFGE-LLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp EEECCCTTS--------CTTHHHHH-HHHHTCEEEEEEEEEEEETT
T ss_pred EEECCCCch--------hHHHHHHH-HHhhcccCCCcEEEEEeCCc
Confidence 999975321 12356677 56 8999999999876443
No 50
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.43 E-value=5.4e-13 Score=113.45 Aligned_cols=109 Identities=9% Similarity=0.086 Sum_probs=83.3
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-CCCceeEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYDVI 179 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~-~~~~fDvI 179 (257)
.+..+||+||||+|..+..+++.. ..+|+++|+++.+++.|+++.... .++++++.+|+.+.+.. .+++||+|
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~fD~V 132 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAP-IDEHWIIECNDGVFQRLRDWAPRQ-----THKVIPLKGLWEDVAPTLPDGHFDGI 132 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSC-EEEEEEEECCHHHHHHHHHHGGGC-----SSEEEEEESCHHHHGGGSCTTCEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHhcC-CCeEEEEcCCHHHHHHHHHHHHhc-----CCCeEEEecCHHHhhcccCCCceEEE
Confidence 456799999999999999998754 359999999999999999987643 26899999999987543 34789999
Q ss_pred EEcCCCCCCCCcccCCch-HHHHHHHHcCcCCCCcEEEEe
Q 025141 180 IGDLADPIEGGPCYKLYT-KSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L~t-~ef~~~~~~~~L~pgGil~~~ 218 (257)
++|.+... .+..+... ..++++ ++++|||||++++.
T Consensus 133 ~~d~~~~~--~~~~~~~~~~~~l~~-~~r~LkpgG~l~~~ 169 (236)
T 1zx0_A 133 LYDTYPLS--EETWHTHQFNFIKNH-AFRLLKPGGVLTYC 169 (236)
T ss_dssp EECCCCCB--GGGTTTHHHHHHHHT-HHHHEEEEEEEEEC
T ss_pred EECCcccc--hhhhhhhhHHHHHHH-HHHhcCCCeEEEEE
Confidence 99754321 11112212 256888 79999999999863
No 51
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.43 E-value=4.5e-12 Score=105.94 Aligned_cols=118 Identities=16% Similarity=0.152 Sum_probs=91.8
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++.+|||||||+|.++..+++. ..+|+++|+++++++.|++++...+ ...+++++.+|+.+.+... ++||+|+
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g---~~~~v~~~~~d~~~~~~~~-~~~D~v~ 127 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYG---LSPRMRAVQGTAPAALADL-PLPEAVF 127 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEESCTTGGGTTS-CCCSEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcC---CCCCEEEEeCchhhhcccC-CCCCEEE
Confidence 45689999999999999999987 4699999999999999999876542 1238999999998866443 5799999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhhC
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVF 242 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~F 242 (257)
++... ..++++. +.+.|+|||++++... ..+....+.+.+++.-
T Consensus 128 ~~~~~-----------~~~~l~~-~~~~LkpgG~lv~~~~------~~~~~~~~~~~l~~~g 171 (204)
T 3njr_A 128 IGGGG-----------SQALYDR-LWEWLAPGTRIVANAV------TLESETLLTQLHARHG 171 (204)
T ss_dssp ECSCC-----------CHHHHHH-HHHHSCTTCEEEEEEC------SHHHHHHHHHHHHHHC
T ss_pred ECCcc-----------cHHHHHH-HHHhcCCCcEEEEEec------CcccHHHHHHHHHhCC
Confidence 87521 1237888 7999999999998753 2445666666676653
No 52
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.43 E-value=5e-13 Score=112.67 Aligned_cols=105 Identities=20% Similarity=0.324 Sum_probs=85.4
Q ss_pred CCCCeEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcC---C--C
Q 025141 101 PNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR---K--E 174 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~---~--~ 174 (257)
.++++||+||||+|..+..+++. ++..+|+++|+++.+++.|++++...+ ..++++++.+|+.+.+... . +
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g---~~~~i~~~~~d~~~~~~~~~~~~~~~ 144 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAE---AEHKIDLRLKPALETLDELLAAGEAG 144 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTT---CTTTEEEEESCHHHHHHHHHHTTCTT
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCC---CCCeEEEEEcCHHHHHHHHHhcCCCC
Confidence 46789999999999999999986 325799999999999999999987543 2468999999998876542 1 6
Q ss_pred ceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 175 SYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 175 ~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
+||+|++|+... ....+++. +.+.|+|||++++.
T Consensus 145 ~~D~v~~d~~~~---------~~~~~l~~-~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 145 TFDVAVVDADKE---------NCSAYYER-CLQLLRPGGILAVL 178 (229)
T ss_dssp CEEEEEECSCST---------THHHHHHH-HHHHEEEEEEEEEE
T ss_pred CccEEEECCCHH---------HHHHHHHH-HHHHcCCCeEEEEE
Confidence 899999986521 13578888 78999999999884
No 53
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.43 E-value=1e-12 Score=112.62 Aligned_cols=134 Identities=12% Similarity=0.079 Sum_probs=94.6
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhcc--CCCCCCCeEEEEcchHHHHh--cCCCce
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNK--EAFSDPRLELVINDARAELE--SRKESY 176 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~--~~~~~~rv~i~~~Da~~~l~--~~~~~f 176 (257)
.+..+||+||||+|.++..+++..+...|++||+++.+++.|++.+.... .....++++++.+|+.+++. -..++|
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 34568999999999999999987555799999999999999998764210 00124689999999987654 245789
Q ss_pred eEEEEcCCCCCCCCc--ccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhh
Q 025141 177 DVIIGDLADPIEGGP--CYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV 241 (257)
Q Consensus 177 DvIi~D~~~~~~~~p--~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~ 241 (257)
|.|++..++|+.... ...+....+++. ++++|+|||.+++.+. .......+.+.+.+.
T Consensus 125 D~v~~~~~dp~~k~~h~krr~~~~~~l~~-~~~~LkpGG~l~~~td------~~~~~~~~~~~l~~~ 184 (235)
T 3ckk_A 125 TKMFFLFPDPHFKRTKHKWRIISPTLLAE-YAYVLRVGGLVYTITD------VLELHDWMCTHFEEH 184 (235)
T ss_dssp EEEEEESCC-----------CCCHHHHHH-HHHHEEEEEEEEEEES------CHHHHHHHHHHHHTS
T ss_pred eEEEEeCCCchhhhhhhhhhhhhHHHHHH-HHHHCCCCCEEEEEeC------CHHHHHHHHHHHHHC
Confidence 999998777652110 123445789999 7999999999998753 234455555656543
No 54
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.43 E-value=1.2e-12 Score=117.73 Aligned_cols=129 Identities=12% Similarity=0.176 Sum_probs=91.9
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcC---CCcee
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR---KESYD 177 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~---~~~fD 177 (257)
.++++|||+|||+|.++..+++. +. +|++||+++.+++.|++++..++ +.+.+++++.+|+.+++... .++||
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~-ga-~V~~VD~s~~al~~a~~n~~~~g--l~~~~v~~i~~D~~~~l~~~~~~~~~fD 227 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAA-GA-EVTHVDASKKAIGWAKENQVLAG--LEQAPIRWICEDAMKFIQREERRGSTYD 227 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT-TC-EEEEECSCHHHHHHHHHHHHHHT--CTTSCEEEECSCHHHHHHHHHHHTCCBS
T ss_pred CCCCcEEEcccccCHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHHcC--CCccceEEEECcHHHHHHHHHhcCCCce
Confidence 35679999999999999999985 43 99999999999999999987653 22336999999999988542 46899
Q ss_pred EEEEcCCCCCCCCcccCCc-----hHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHH
Q 025141 178 VIIGDLADPIEGGPCYKLY-----TKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYN 236 (257)
Q Consensus 178 vIi~D~~~~~~~~p~~~L~-----t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~ 236 (257)
+|++|++.-.. .+...++ ..++++. +.+.|+|||++++...+.. ......+..+++
T Consensus 228 ~Ii~dPP~~~~-~~~~~~~~~~~~~~~ll~~-~~~~LkpgG~lli~~~~~~-~~~~~~~~~~l~ 288 (332)
T 2igt_A 228 IILTDPPKFGR-GTHGEVWQLFDHLPLMLDI-CREILSPKALGLVLTAYSI-RASFYSMHELMR 288 (332)
T ss_dssp EEEECCCSEEE-CTTCCEEEHHHHHHHHHHH-HHHTBCTTCCEEEEEECCT-TSCHHHHHHHHH
T ss_pred EEEECCccccC-CchHHHHHHHHHHHHHHHH-HHHhcCcCcEEEEEECCCC-CCCHHHHHHHHH
Confidence 99999873110 1111111 2477887 6899999999666543321 223444444444
No 55
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.42 E-value=8.4e-13 Score=108.78 Aligned_cols=115 Identities=13% Similarity=0.041 Sum_probs=87.1
Q ss_pred CCCCeEEEEeccchHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvI 179 (257)
.+..+|||+|||+|..+..+++.. +..+|+++|+++.+++.|++++...+ ..++++++.+|+.++....+++||+|
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~fD~v 97 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLN---LIDRVTLIKDGHQNMDKYIDCPVKAV 97 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTT---CGGGEEEECSCGGGGGGTCCSCEEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCCeEEEECCHHHHhhhccCCceEE
Confidence 456799999999999999998862 34699999999999999999987542 23689999999988765556889999
Q ss_pred EEcCCC-CCCCCc--ccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 180 IGDLAD-PIEGGP--CYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 180 i~D~~~-~~~~~p--~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+++++- +..... ...-...++++. +.+.|+|||++++..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~Lk~gG~l~~~~ 139 (197)
T 3eey_A 98 MFNLGYLPSGDHSISTRPETTIQALSK-AMELLVTGGIITVVI 139 (197)
T ss_dssp EEEESBCTTSCTTCBCCHHHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EEcCCcccCcccccccCcccHHHHHHH-HHHhCcCCCEEEEEE
Confidence 999742 211000 000112468898 799999999998764
No 56
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.42 E-value=2.5e-12 Score=111.01 Aligned_cols=122 Identities=18% Similarity=0.242 Sum_probs=92.5
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc--CCCceeE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES--RKESYDV 178 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~--~~~~fDv 178 (257)
.++.+|||||||+|..+..++...+..+|++||+++..++.|+++....+ -.+++++++|+.++... ..++||+
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----l~~v~~~~~d~~~~~~~~~~~~~fD~ 154 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLG----LKGARALWGRAEVLAREAGHREAYAR 154 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHT----CSSEEEEECCHHHHTTSTTTTTCEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhC----CCceEEEECcHHHhhcccccCCCceE
Confidence 35689999999999999988876555799999999999999999987542 24699999999887642 2478999
Q ss_pred EEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhh
Q 025141 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV 241 (257)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~ 241 (257)
|++....+ -..+++. +.+.|+|||.+++..+.. ..+.+..+.+.++..
T Consensus 155 I~s~a~~~----------~~~ll~~-~~~~LkpgG~l~~~~g~~----~~~e~~~~~~~l~~~ 202 (249)
T 3g89_A 155 AVARAVAP----------LCVLSEL-LLPFLEVGGAAVAMKGPR----VEEELAPLPPALERL 202 (249)
T ss_dssp EEEESSCC----------HHHHHHH-HGGGEEEEEEEEEEECSC----CHHHHTTHHHHHHHH
T ss_pred EEECCcCC----------HHHHHHH-HHHHcCCCeEEEEEeCCC----cHHHHHHHHHHHHHc
Confidence 99975421 1467888 799999999988765432 234445555555543
No 57
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.42 E-value=4.6e-12 Score=110.41 Aligned_cols=135 Identities=14% Similarity=0.150 Sum_probs=96.9
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++.+|||+|||+|..+..+++..+..+|+++|+++.+++.|++++...+ .++++++.+|+.+.+. .++||+|+
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~----~~~v~~~~~d~~~~~~--~~~fD~Iv 181 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLA----IKNIHILQSDWFSALA--GQQFAMIV 181 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHT----CCSEEEECCSTTGGGT--TCCEEEEE
T ss_pred cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC----CCceEEEEcchhhhcc--cCCccEEE
Confidence 45679999999999999999976455799999999999999999987542 2479999999987653 46899999
Q ss_pred EcCCCCCC-----------CCcccCC--------chHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhh
Q 025141 181 GDLADPIE-----------GGPCYKL--------YTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV 241 (257)
Q Consensus 181 ~D~~~~~~-----------~~p~~~L--------~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~ 241 (257)
++++-... ..|...+ ....+++. +.+.|+|||++++..+. .+.+ .+.+.+++.
T Consensus 182 ~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~-~~~~LkpgG~l~~~~~~----~~~~---~~~~~l~~~ 253 (276)
T 2b3t_A 182 SNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQ-SRNALVSGGFLLLEHGW----QQGE---AVRQAFILA 253 (276)
T ss_dssp ECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHH-HGGGEEEEEEEEEECCS----SCHH---HHHHHHHHT
T ss_pred ECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHH-HHHhcCCCCEEEEEECc----hHHH---HHHHHHHHC
Confidence 99763211 0121122 23577888 79999999999987542 2333 334444443
Q ss_pred -CCceEEEe
Q 025141 242 -FKCGCCAL 249 (257)
Q Consensus 242 -F~~v~~~~ 249 (257)
|..+..+.
T Consensus 254 Gf~~v~~~~ 262 (276)
T 2b3t_A 254 GYHDVETCR 262 (276)
T ss_dssp TCTTCCEEE
T ss_pred CCcEEEEEe
Confidence 66555543
No 58
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.41 E-value=1.6e-12 Score=119.11 Aligned_cols=130 Identities=12% Similarity=0.104 Sum_probs=93.4
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc---CCCcee
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES---RKESYD 177 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~---~~~~fD 177 (257)
.+.++|||+|||+|.++..+++. +..+|++||+++.+++.|++++..++ +.+.+++++.+|+.+++.. ..++||
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~-ga~~V~~vD~s~~al~~A~~N~~~n~--~~~~~v~~~~~D~~~~l~~~~~~~~~fD 287 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMG-GAMATTSVDLAKRSRALSLAHFEANH--LDMANHQLVVMDVFDYFKYARRHHLTYD 287 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHT-TBSEEEEEESCTTHHHHHHHHHHHTT--CCCTTEEEEESCHHHHHHHHHHTTCCEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcC--CCccceEEEECCHHHHHHHHHHhCCCcc
Confidence 45689999999999999999985 45699999999999999999998663 2222899999999998864 246899
Q ss_pred EEEEcCCCCCC-CCcccCCc--hHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHH
Q 025141 178 VIIGDLADPIE-GGPCYKLY--TKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYN 236 (257)
Q Consensus 178 vIi~D~~~~~~-~~p~~~L~--t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~ 236 (257)
+|++|++.... ........ -.++++. +.+.|+|||++++.+.++. ...+.+..+++
T Consensus 288 ~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~-~~~~L~pgG~l~~~~~~~~--~~~~~~~~~i~ 346 (385)
T 2b78_A 288 IIIIDPPSFARNKKEVFSVSKDYHKLIRQ-GLEILSENGLIIASTNAAN--MTVSQFKKQIE 346 (385)
T ss_dssp EEEECCCCC-----CCCCHHHHHHHHHHH-HHHTEEEEEEEEEEECCTT--SCHHHHHHHHH
T ss_pred EEEECCCCCCCChhhHHHHHHHHHHHHHH-HHHhcCCCcEEEEEeCCCc--CCHHHHHHHHH
Confidence 99999875210 00000111 1345666 5899999999998876653 23444444443
No 59
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.41 E-value=6e-13 Score=112.83 Aligned_cols=104 Identities=22% Similarity=0.322 Sum_probs=85.9
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcC--CCceeEE
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR--KESYDVI 179 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~--~~~fDvI 179 (257)
++++||+||||+|..+..+++..+..+|+++|+++..++.|++++...+ ..++++++.+|+.+.+... .++||+|
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~~~fD~I 130 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALG---LESRIELLFGDALQLGEKLELYPLFDVL 130 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTT---CTTTEEEECSCGGGSHHHHTTSCCEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEECCHHHHHHhcccCCCccEE
Confidence 5679999999999999999987545799999999999999999986542 2458999999998876543 5789999
Q ss_pred EEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
++|...+ ...++++. +.+.|+|||++++.
T Consensus 131 ~~~~~~~---------~~~~~l~~-~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 131 FIDAAKG---------QYRRFFDM-YSPMVRPGGLILSD 159 (233)
T ss_dssp EEEGGGS---------CHHHHHHH-HGGGEEEEEEEEEE
T ss_pred EECCCHH---------HHHHHHHH-HHHHcCCCeEEEEE
Confidence 9986421 13578888 79999999999986
No 60
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.41 E-value=1.9e-12 Score=107.38 Aligned_cols=107 Identities=12% Similarity=0.102 Sum_probs=83.8
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++.+||+||||+|..+..+++.+ ..+++++|+++.+++.|++.+...+ ..++++++.+|+.+. ....++||+|+
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~~D~s~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~-~~~~~~~D~v~ 116 (219)
T 3dlc_A 42 ITAGTCIDIGSGPGALSIALAKQS-DFSIRALDFSKHMNEIALKNIADAN---LNDRIQIVQGDVHNI-PIEDNYADLIV 116 (219)
T ss_dssp CCEEEEEEETCTTSHHHHHHHHHS-EEEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEECBTTBC-SSCTTCEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHcC-CCeEEEEECCHHHHHHHHHHHHhcc---ccCceEEEEcCHHHC-CCCcccccEEE
Confidence 344599999999999999999873 4699999999999999999886542 346899999998663 23357899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+...-... -....+++. +++.|+|||.+++..
T Consensus 117 ~~~~l~~~------~~~~~~l~~-~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 117 SRGSVFFW------EDVATAFRE-IYRILKSGGKTYIGG 148 (219)
T ss_dssp EESCGGGC------SCHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred ECchHhhc------cCHHHHHHH-HHHhCCCCCEEEEEe
Confidence 97642211 113578898 799999999998853
No 61
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.41 E-value=1.2e-12 Score=108.53 Aligned_cols=130 Identities=16% Similarity=0.184 Sum_probs=98.1
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++++|||||||+|.++..+++. +..+|+++|+++.+++.|++++...+ .++++++.+|+.++. .++||+|+
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~---~~~fD~i~ 130 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKL-GAKSVLATDISDESMTAAEENAALNG----IYDIALQKTSLLADV---DGKFDLIV 130 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTT----CCCCEEEESSTTTTC---CSCEEEEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcC----CCceEEEeccccccC---CCCceEEE
Confidence 46789999999999999998886 44699999999999999999987542 234999999987753 47899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhh-CCceEEEeecCcc
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV-FKCGCCALFSSYS 254 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~-F~~v~~~~~~~~~ 254 (257)
++.+.. . ...+++. +++.|+|||.+++..-. ......+.+.+++. |..+.......|.
T Consensus 131 ~~~~~~-------~--~~~~l~~-~~~~L~~gG~l~~~~~~------~~~~~~~~~~~~~~Gf~~~~~~~~~~w~ 189 (205)
T 3grz_A 131 ANILAE-------I--LLDLIPQ-LDSHLNEDGQVIFSGID------YLQLPKIEQALAENSFQIDLKMRAGRWI 189 (205)
T ss_dssp EESCHH-------H--HHHHGGG-SGGGEEEEEEEEEEEEE------GGGHHHHHHHHHHTTEEEEEEEEETTEE
T ss_pred ECCcHH-------H--HHHHHHH-HHHhcCCCCEEEEEecC------cccHHHHHHHHHHcCCceEEeeccCCEE
Confidence 985421 1 2577888 79999999999885311 12244566666665 7777766666664
No 62
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.40 E-value=1.1e-11 Score=100.49 Aligned_cols=121 Identities=18% Similarity=0.204 Sum_probs=94.7
Q ss_pred CCCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025141 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (257)
Q Consensus 100 ~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvI 179 (257)
..++.+||++|||+|..+..+++.. .+|+++|+++.+++.+++++...+ ..++++++.+|+.+.+... ++||+|
T Consensus 31 ~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~~~~~-~~~D~v 104 (192)
T 1l3i_A 31 PGKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHG---LGDNVTLMEGDAPEALCKI-PDIDIA 104 (192)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTT---CCTTEEEEESCHHHHHTTS-CCEEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcC---CCcceEEEecCHHHhcccC-CCCCEE
Confidence 3466899999999999999999864 699999999999999999886542 2368999999998866432 489999
Q ss_pred EEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhh-C
Q 025141 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV-F 242 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~-F 242 (257)
+++...+ + ..++++. +.+.|+|||.+++... .......+.+.+++. |
T Consensus 105 ~~~~~~~-------~--~~~~l~~-~~~~l~~gG~l~~~~~------~~~~~~~~~~~l~~~g~ 152 (192)
T 1l3i_A 105 VVGGSGG-------E--LQEILRI-IKDKLKPGGRIIVTAI------LLETKFEAMECLRDLGF 152 (192)
T ss_dssp EESCCTT-------C--HHHHHHH-HHHTEEEEEEEEEEEC------BHHHHHHHHHHHHHTTC
T ss_pred EECCchH-------H--HHHHHHH-HHHhcCCCcEEEEEec------CcchHHHHHHHHHHCCC
Confidence 9985421 1 2678898 7999999999988642 244566777777765 5
No 63
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.40 E-value=7.3e-13 Score=112.81 Aligned_cols=104 Identities=22% Similarity=0.317 Sum_probs=84.5
Q ss_pred CCCeEEEEeccchHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcC---C--Cc
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKT-VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR---K--ES 175 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~---~--~~ 175 (257)
++++||+||||+|..+..+++..+ ..+|+++|+++..++.|++++...+ ..++++++.+|+.+.+... . ++
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g---~~~~i~~~~~d~~~~l~~l~~~~~~~~ 148 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAG---VAEKISLRLGPALATLEQLTQGKPLPE 148 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT---CGGGEEEEESCHHHHHHHHHTSSSCCC
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEEcCHHHHHHHHHhcCCCCC
Confidence 568999999999999999998632 4699999999999999999986442 2358999999998876542 2 68
Q ss_pred eeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 176 YDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 176 fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
||+|++|...+ ...++++. +.+.|+|||++++.
T Consensus 149 fD~V~~d~~~~---------~~~~~l~~-~~~~LkpgG~lv~~ 181 (232)
T 3cbg_A 149 FDLIFIDADKR---------NYPRYYEI-GLNLLRRGGLMVID 181 (232)
T ss_dssp EEEEEECSCGG---------GHHHHHHH-HHHTEEEEEEEEEE
T ss_pred cCEEEECCCHH---------HHHHHHHH-HHHHcCCCeEEEEe
Confidence 99999986421 13578888 79999999999985
No 64
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.39 E-value=9e-13 Score=114.51 Aligned_cols=99 Identities=19% Similarity=0.245 Sum_probs=79.4
Q ss_pred CCCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025141 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (257)
Q Consensus 100 ~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvI 179 (257)
.+...+|||||||+|..+..++++. .+|++||+++.+++.|++ .++++++.+|+.+. .-.+++||+|
T Consensus 37 ~~~~~~vLDvGcGtG~~~~~l~~~~--~~v~gvD~s~~ml~~a~~----------~~~v~~~~~~~e~~-~~~~~sfD~v 103 (257)
T 4hg2_A 37 APARGDALDCGCGSGQASLGLAEFF--ERVHAVDPGEAQIRQALR----------HPRVTYAVAPAEDT-GLPPASVDVA 103 (257)
T ss_dssp SSCSSEEEEESCTTTTTHHHHHTTC--SEEEEEESCHHHHHTCCC----------CTTEEEEECCTTCC-CCCSSCEEEE
T ss_pred cCCCCCEEEEcCCCCHHHHHHHHhC--CEEEEEeCcHHhhhhhhh----------cCCceeehhhhhhh-cccCCcccEE
Confidence 4667899999999999999999863 589999999999987764 36899999998653 3345789999
Q ss_pred EEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
++...-++ +-...++++ ++++|||||++++..
T Consensus 104 ~~~~~~h~-------~~~~~~~~e-~~rvLkpgG~l~~~~ 135 (257)
T 4hg2_A 104 IAAQAMHW-------FDLDRFWAE-LRRVARPGAVFAAVT 135 (257)
T ss_dssp EECSCCTT-------CCHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EEeeehhH-------hhHHHHHHH-HHHHcCCCCEEEEEE
Confidence 98654333 123578999 799999999998765
No 65
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.38 E-value=3.3e-12 Score=109.45 Aligned_cols=117 Identities=14% Similarity=0.136 Sum_probs=88.4
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCC----CCCCCeEEEEcchHHHHhc--CCCc
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEA----FSDPRLELVINDARAELES--RKES 175 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~----~~~~rv~i~~~Da~~~l~~--~~~~ 175 (257)
+..+|||||||+|.++..+++..+..+|++||+++.+++.+++++...... ..-++++++.+|+.+++.. ....
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 457899999999999999998755569999999999999999987543100 0125899999999987763 3578
Q ss_pred eeEEEEcCCCCCCCCc--ccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 176 YDVIIGDLADPIEGGP--CYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 176 fDvIi~D~~~~~~~~p--~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+|.|++..++++.... ...+...++++. +.++|+|||++++.+
T Consensus 129 ~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~-~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 129 LSKMFFCFPDPHFKQRKHKARIITNTLLSE-YAYVLKEGGVVYTIT 173 (246)
T ss_dssp EEEEEEESCCCC------CSSCCCHHHHHH-HHHHEEEEEEEEEEE
T ss_pred cCEEEEECCCcccccchhHHhhccHHHHHH-HHHHcCCCCEEEEEe
Confidence 9999888766542110 123445789999 799999999999864
No 66
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.38 E-value=1.3e-12 Score=111.43 Aligned_cols=106 Identities=20% Similarity=0.319 Sum_probs=84.6
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcC-------
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKT-VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR------- 172 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~------- 172 (257)
.++++||+||||+|..+..+++..+ ..+|+++|+++.+++.|++++...+ ..++++++.+|+.+.+...
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g---~~~~v~~~~~d~~~~~~~~~~~~~~~ 135 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENG---LENKIFLKLGSALETLQVLIDSKSAP 135 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT---CGGGEEEEESCHHHHHHHHHHCSSCC
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCCEEEEECCHHHHHHHHHhhcccc
Confidence 3578999999999999999998633 5799999999999999999986442 2357999999998876532
Q ss_pred --------C-CceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 173 --------K-ESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 173 --------~-~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
. ++||+|+++...+ ...++++. +.+.|+|||++++..
T Consensus 136 ~~~~~f~~~~~~fD~I~~~~~~~---------~~~~~l~~-~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 136 SWASDFAFGPSSIDLFFLDADKE---------NYPNYYPL-ILKLLKPGGLLIADN 181 (239)
T ss_dssp GGGTTTCCSTTCEEEEEECSCGG---------GHHHHHHH-HHHHEEEEEEEEEEC
T ss_pred cccccccCCCCCcCEEEEeCCHH---------HHHHHHHH-HHHHcCCCeEEEEEc
Confidence 2 6899999985311 12477888 799999999999853
No 67
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.37 E-value=1.3e-12 Score=114.09 Aligned_cols=124 Identities=15% Similarity=0.057 Sum_probs=93.8
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.+.++|||+|||+|.++..+++..+..+|++||+++.+++.|++++..++ -++++++.+|+.++ .. .++||+|+
T Consensus 118 ~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~----l~~~~~~~~d~~~~-~~-~~~~D~Vi 191 (272)
T 3a27_A 118 NENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNK----LNNVIPILADNRDV-EL-KDVADRVI 191 (272)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTT----CSSEEEEESCGGGC-CC-TTCEEEEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC----CCCEEEEECChHHc-Cc-cCCceEEE
Confidence 45689999999999999999987445699999999999999999988663 35789999999987 44 57899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhhC
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVF 242 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~F 242 (257)
+|++. . ..+++.. +.+.|+|||++++.+.... ....+.+.+..+.+++.+
T Consensus 192 ~d~p~----~------~~~~l~~-~~~~LkpgG~l~~s~~~~~-~~~~~~~~~~~~~~~~~~ 241 (272)
T 3a27_A 192 MGYVH----K------THKFLDK-TFEFLKDRGVIHYHETVAE-KIMYERPIERLKFYAEKN 241 (272)
T ss_dssp ECCCS----S------GGGGHHH-HHHHEEEEEEEEEEEEEEG-GGTTTHHHHHHHHHHHHT
T ss_pred ECCcc----c------HHHHHHH-HHHHcCCCCEEEEEEcCcc-ccccccHHHHHHHHHHHh
Confidence 99763 1 1345677 6889999999987653321 011134556666666654
No 68
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.37 E-value=2.7e-12 Score=112.99 Aligned_cols=110 Identities=18% Similarity=0.081 Sum_probs=84.9
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++.+|||||||+|..+..+++..+ .+|+++|+++.+++.|++.+...+ ...+++++.+|+.++ .++||+|+
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~----~~~fD~v~ 142 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVD---SPRRKEVRIQGWEEF----DEPVDRIV 142 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSC---CSSCEEEEECCGGGC----CCCCSEEE
T ss_pred CCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcC---CCCceEEEECCHHHc----CCCccEEE
Confidence 4567999999999999999998744 689999999999999999886542 245899999999876 68899999
Q ss_pred EcCCCCCCCCcc---cCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 181 GDLADPIEGGPC---YKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 181 ~D~~~~~~~~p~---~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+...-.....|. ..-....+++. +++.|+|||++++..
T Consensus 143 ~~~~~~~~~d~~~~~~~~~~~~~l~~-~~~~LkpgG~l~i~~ 183 (302)
T 3hem_A 143 SLGAFEHFADGAGDAGFERYDTFFKK-FYNLTPDDGRMLLHT 183 (302)
T ss_dssp EESCGGGTTCCSSCCCTTHHHHHHHH-HHHSSCTTCEEEEEE
T ss_pred EcchHHhcCccccccchhHHHHHHHH-HHHhcCCCcEEEEEE
Confidence 875421110110 01123588998 799999999999875
No 69
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.37 E-value=2.9e-12 Score=110.70 Aligned_cols=106 Identities=14% Similarity=0.107 Sum_probs=85.1
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
+++.+|||||||+|..+..+++. +..+|+++|+++.+++.|++.+...+ ..++++++.+|+.+. ....++||+|+
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~-~~~~~~fD~i~ 119 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSG---LQNRVTGIVGSMDDL-PFRNEELDLIW 119 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEECCTTSC-CCCTTCEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcC---CCcCcEEEEcChhhC-CCCCCCEEEEE
Confidence 45789999999999999999997 44699999999999999999876442 346899999998663 22357899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+...-. ++-...+++. +++.|+|||++++..
T Consensus 120 ~~~~~~-------~~~~~~~l~~-~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 120 SEGAIY-------NIGFERGLNE-WRKYLKKGGYLAVSE 150 (267)
T ss_dssp ESSCGG-------GTCHHHHHHH-HGGGEEEEEEEEEEE
T ss_pred EcCCce-------ecCHHHHHHH-HHHHcCCCCEEEEEE
Confidence 875421 2224678998 799999999998764
No 70
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.36 E-value=5e-12 Score=124.19 Aligned_cols=117 Identities=15% Similarity=0.146 Sum_probs=90.7
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~ 181 (257)
+.++||++|||+|+++..+++. +..+|++||+++.+++.|++++..++ +.+++++++.+|++++++...++||+|++
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~-ga~~V~aVD~s~~al~~a~~N~~~ng--l~~~~v~~i~~D~~~~l~~~~~~fD~Ii~ 615 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLG-GARSTTTVDMSRTYLEWAERNLRLNG--LTGRAHRLIQADCLAWLREANEQFDLIFI 615 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTT--CCSTTEEEEESCHHHHHHHCCCCEEEEEE
T ss_pred CCCcEEEeeechhHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcC--CCccceEEEecCHHHHHHhcCCCccEEEE
Confidence 5789999999999999998884 45689999999999999999998764 23368999999999999877789999999
Q ss_pred cCCCCCCCCcccCCc-----hHHHHHHHHcCcCCCCcEEEEecCCC
Q 025141 182 DLADPIEGGPCYKLY-----TKSFYEFVVKPRLNPEGIFVTQAGPA 222 (257)
Q Consensus 182 D~~~~~~~~p~~~L~-----t~ef~~~~~~~~L~pgGil~~~~~~~ 222 (257)
|++.-.........+ -.++++. +.+.|+|||++++.+.+.
T Consensus 616 DPP~f~~~~~~~~~~~~~~~~~~ll~~-a~~~LkpgG~L~~s~~~~ 660 (703)
T 3v97_A 616 DPPTFSNSKRMEDAFDVQRDHLALMKD-LKRLLRAGGTIMFSNNKR 660 (703)
T ss_dssp CCCSBC-------CCBHHHHHHHHHHH-HHHHEEEEEEEEEEECCT
T ss_pred CCccccCCccchhHHHHHHHHHHHHHH-HHHhcCCCcEEEEEECCc
Confidence 987411000000111 2356777 689999999999876553
No 71
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.36 E-value=3.8e-12 Score=110.92 Aligned_cols=108 Identities=18% Similarity=0.284 Sum_probs=85.7
Q ss_pred CCCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025141 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (257)
Q Consensus 100 ~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvI 179 (257)
.+++.+||+||||+|.++..+++. + .+|+++|+++.+++.|++.+...+ ..++++++.+|+.+......++||+|
T Consensus 66 ~~~~~~vLDiGcG~G~~~~~l~~~-~-~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~fD~v 140 (285)
T 4htf_A 66 GPQKLRVLDAGGGEGQTAIKMAER-G-HQVILCDLSAQMIDRAKQAAEAKG---VSDNMQFIHCAAQDVASHLETPVDLI 140 (285)
T ss_dssp CSSCCEEEEETCTTCHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHC-C---CGGGEEEEESCGGGTGGGCSSCEEEE
T ss_pred CCCCCEEEEeCCcchHHHHHHHHC-C-CEEEEEECCHHHHHHHHHHHHhcC---CCcceEEEEcCHHHhhhhcCCCceEE
Confidence 345789999999999999999986 3 599999999999999999876432 23689999999988764556899999
Q ss_pred EEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
++...-.. .+ -...+++. ++++|+|||++++..
T Consensus 141 ~~~~~l~~--~~----~~~~~l~~-~~~~LkpgG~l~~~~ 173 (285)
T 4htf_A 141 LFHAVLEW--VA----DPRSVLQT-LWSVLRPGGVLSLMF 173 (285)
T ss_dssp EEESCGGG--CS----CHHHHHHH-HHHTEEEEEEEEEEE
T ss_pred EECchhhc--cc----CHHHHHHH-HHHHcCCCeEEEEEE
Confidence 99754221 11 12578898 799999999998754
No 72
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.36 E-value=3.5e-12 Score=106.75 Aligned_cols=109 Identities=21% Similarity=0.285 Sum_probs=81.7
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCC-CCCCCeEEEEcchHHHHhcCCCceeEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEA-FSDPRLELVINDARAELESRKESYDVI 179 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~-~~~~rv~i~~~Da~~~l~~~~~~fDvI 179 (257)
.++++|||||||+|..+..+++..+..+++++|+++.+++.|++.+...+-. ...++++++.+|+.. +....++||+|
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~fD~V 106 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVY-RDKRFSGYDAA 106 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSS-CCGGGTTCSEE
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccc-cccccCCCCEE
Confidence 4678999999999999999998755579999999999999999987643200 011389999999732 23334789999
Q ss_pred EEcCCCCCCCCcccCCc---hHHHHHHHHcCcCCCCcEEEEe
Q 025141 180 IGDLADPIEGGPCYKLY---TKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L~---t~ef~~~~~~~~L~pgGil~~~ 218 (257)
++...-. ++- ...+++. +++.|+|||+++..
T Consensus 107 ~~~~~l~-------~~~~~~~~~~l~~-~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 107 TVIEVIE-------HLDENRLQAFEKV-LFEFTRPQTVIVST 140 (219)
T ss_dssp EEESCGG-------GCCHHHHHHHHHH-HHTTTCCSEEEEEE
T ss_pred EEHHHHH-------hCCHHHHHHHHHH-HHHhhCCCEEEEEc
Confidence 9864321 222 2478898 79999999987764
No 73
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.35 E-value=5.8e-12 Score=105.34 Aligned_cols=112 Identities=17% Similarity=0.154 Sum_probs=81.9
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCC-CCCCCeEEEEcchHHHHhcCCCceeEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEA-FSDPRLELVINDARAELESRKESYDVI 179 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~-~~~~rv~i~~~Da~~~l~~~~~~fDvI 179 (257)
.++++|||||||+|.++..+++..+..+|+++|+++.+++.|++.+...+-. ...++++++.+|+. ......++||+|
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~fD~v 106 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALT-YQDKRFHGYDAA 106 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTT-SCCGGGCSCSEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcc-cccccCCCcCEE
Confidence 4568999999999999999998755579999999999999999987643200 01138999999973 233334789999
Q ss_pred EEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
++...-.. -+ .-....+++. +++.|+|||++++.
T Consensus 107 ~~~~~l~~--~~--~~~~~~~l~~-~~~~LkpgG~li~~ 140 (217)
T 3jwh_A 107 TVIEVIEH--LD--LSRLGAFERV-LFEFAQPKIVIVTT 140 (217)
T ss_dssp EEESCGGG--CC--HHHHHHHHHH-HHTTTCCSEEEEEE
T ss_pred eeHHHHHc--CC--HHHHHHHHHH-HHHHcCCCEEEEEc
Confidence 98754211 01 0012578898 79999999988764
No 74
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.35 E-value=5.7e-12 Score=105.98 Aligned_cols=138 Identities=14% Similarity=0.142 Sum_probs=90.4
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHh--cCCCceeE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELE--SRKESYDV 178 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~--~~~~~fDv 178 (257)
.++.+|||||||+|..+..+++..+..+|++||+++.+++.+.+.... .+++.++.+|+.+... ...++||+
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~------~~~v~~~~~d~~~~~~~~~~~~~fD~ 129 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRE------RNNIIPLLFDASKPWKYSGIVEKVDL 129 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHH------CSSEEEECSCTTCGGGTTTTCCCEEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhc------CCCeEEEEcCCCCchhhcccccceeE
Confidence 356799999999999999988764446999999999987655544321 1468888999876421 12378999
Q ss_pred EEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec--CCCCCCCC-hHHHHHHHHHHhhhCCceEEEeecCc
Q 025141 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA--GPAGIFSH-TEVFSCIYNTLRQVFKCGCCALFSSY 253 (257)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~--~~~~~~~~-~~~~~~~~~~l~~~F~~v~~~~~~~~ 253 (257)
|+++...+ .....+++. +++.|||||.+++.. .+...... .+.+....+.|++.|..+.....+++
T Consensus 130 V~~~~~~~--------~~~~~~l~~-~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~p~ 198 (210)
T 1nt2_A 130 IYQDIAQK--------NQIEILKAN-AEFFLKEKGEVVIMVKARSIDSTAEPEEVFKSVLKEMEGDFKIVKHGSLMPY 198 (210)
T ss_dssp EEECCCST--------THHHHHHHH-HHHHEEEEEEEEEEEEHHHHCTTSCHHHHHHHHHHHHHTTSEEEEEEECTTT
T ss_pred EEEeccCh--------hHHHHHHHH-HHHHhCCCCEEEEEEecCCccccCCHHHHHHHHHHHHHhhcEEeeeecCCCC
Confidence 99985422 112345788 799999999998763 11110111 23333344446666766666555443
No 75
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.35 E-value=1.4e-11 Score=112.98 Aligned_cols=135 Identities=21% Similarity=0.203 Sum_probs=96.8
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcC---CCcee
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR---KESYD 177 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~---~~~fD 177 (257)
.++++|||+|||+|+++..+++. +..+|++||+++.+++.|++++..++ +.+++++++.+|+.+++... .++||
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~-g~~~V~~vD~s~~al~~a~~n~~~ng--l~~~~v~~~~~D~~~~~~~~~~~~~~fD 295 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMG-GCSQVVSVDTSQEALDIARQNVELNK--LDLSKAEFVRDDVFKLLRTYRDRGEKFD 295 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTT--CCGGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcC--CCccceEEEECCHHHHHHHHHhcCCCCC
Confidence 46689999999999999999986 35699999999999999999988663 10238999999999987642 46899
Q ss_pred EEEEcCCCCCCCCcc--cC--CchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHH-HHHhhhC
Q 025141 178 VIIGDLADPIEGGPC--YK--LYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIY-NTLRQVF 242 (257)
Q Consensus 178 vIi~D~~~~~~~~p~--~~--L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~-~~l~~~F 242 (257)
+|++|++.... ... .. -.-.+++.. +.+.|+|||++++.+.+.. .....+..+. +.+.+..
T Consensus 296 ~Ii~dpP~~~~-~~~~~~~~~~~~~~~l~~-~~~~LkpgG~l~~~~~~~~--~~~~~~~~~i~~~~~~~g 361 (396)
T 3c0k_A 296 VIVMDPPKFVE-NKSQLMGACRGYKDINML-AIQLLNEGGILLTFSCSGL--MTSDLFQKIIADAAIDAG 361 (396)
T ss_dssp EEEECCSSTTT-CSSSSSCCCTHHHHHHHH-HHHTEEEEEEEEEEECCTT--CCHHHHHHHHHHHHHHHT
T ss_pred EEEECCCCCCC-ChhHHHHHHHHHHHHHHH-HHHhcCCCcEEEEEeCCCc--CCHHHHHHHHHHHHHHcC
Confidence 99999874210 110 00 112467777 6899999999998765542 2333333333 3555553
No 76
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.35 E-value=8.9e-12 Score=113.91 Aligned_cols=136 Identities=14% Similarity=0.089 Sum_probs=98.5
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc---CCCceeE
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES---RKESYDV 178 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~---~~~~fDv 178 (257)
+.++|||+|||+|..+..+++. ..+|++||+++.+++.|++++..++ -++++++.+|+.+++.. ..++||+
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~----~~~~~~~~~d~~~~~~~~~~~~~~fD~ 282 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNG----LGNVRVLEANAFDLLRRLEKEGERFDL 282 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTT----CTTEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcC----CCCceEEECCHHHHHHHHHhcCCCeeE
Confidence 5679999999999999999986 4799999999999999999988763 23499999999998764 2578999
Q ss_pred EEEcCCCCCCCCcccCCc-----hHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHH-HHHHhhhCCceEEE
Q 025141 179 IIGDLADPIEGGPCYKLY-----TKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCI-YNTLRQVFKCGCCA 248 (257)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~-----t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~-~~~l~~~F~~v~~~ 248 (257)
|++|++.-.. .+ ..+. ..++++. +.+.|+|||++++.+.+.. .....+... .+.+.+....+...
T Consensus 283 Ii~dpP~~~~-~~-~~~~~~~~~~~~~l~~-~~~~LkpgG~l~~~~~~~~--~~~~~~~~~i~~~~~~~g~~~~~i 353 (382)
T 1wxx_A 283 VVLDPPAFAK-GK-KDVERAYRAYKEVNLR-AIKLLKEGGILATASCSHH--MTEPLFYAMVAEAAQDAHRLLRVV 353 (382)
T ss_dssp EEECCCCSCC-ST-TSHHHHHHHHHHHHHH-HHHTEEEEEEEEEEECCTT--SCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEECCCCCCC-Ch-hHHHHHHHHHHHHHHH-HHHhcCCCCEEEEEECCCC--CCHHHHHHHHHHHHHHcCCeEEEE
Confidence 9999874211 11 1111 2467787 6899999999998765542 333333333 34555554444443
No 77
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.35 E-value=3.7e-12 Score=108.88 Aligned_cols=105 Identities=20% Similarity=0.142 Sum_probs=82.4
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++.+|||||||+|.++..+++..+ .+|+++|+++.+++.|++.+...+ ..++++++.+|+.+... .++||+|+
T Consensus 35 ~~~~~VLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~l~~a~~~~~~~~---~~~~v~~~~~d~~~~~~--~~~fD~V~ 108 (256)
T 1nkv_A 35 KPGTRILDLGSGSGEMLCTWARDHG-ITGTGIDMSSLFTAQAKRRAEELG---VSERVHFIHNDAAGYVA--NEKCDVAA 108 (256)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHTC-CEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEESCCTTCCC--SSCEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhcC-CeEEEEeCCHHHHHHHHHHHHhcC---CCcceEEEECChHhCCc--CCCCCEEE
Confidence 4568999999999999999988653 589999999999999999876432 23589999999877532 57899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
+...-.. .+ -...+++. +++.|||||.+++.
T Consensus 109 ~~~~~~~--~~----~~~~~l~~-~~r~LkpgG~l~~~ 139 (256)
T 1nkv_A 109 CVGATWI--AG----GFAGAEEL-LAQSLKPGGIMLIG 139 (256)
T ss_dssp EESCGGG--TS----SSHHHHHH-HTTSEEEEEEEEEE
T ss_pred ECCChHh--cC----CHHHHHHH-HHHHcCCCeEEEEe
Confidence 8533211 01 13678898 79999999998874
No 78
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.34 E-value=4.8e-12 Score=108.18 Aligned_cols=106 Identities=13% Similarity=0.081 Sum_probs=84.5
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
+++.+||+||||+|..+..+++..+ .+|+++|+++.+++.+++++...+ ..++++++.+|+.+. ....++||+|+
T Consensus 45 ~~~~~vLDiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~-~~~~~~fD~v~ 119 (257)
T 3f4k_A 45 TDDAKIADIGCGTGGQTLFLADYVK-GQITGIDLFPDFIEIFNENAVKAN---CADRVKGITGSMDNL-PFQNEELDLIW 119 (257)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHCC-SEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEECCTTSC-SSCTTCEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHhCC-CeEEEEECCHHHHHHHHHHHHHcC---CCCceEEEECChhhC-CCCCCCEEEEE
Confidence 4567999999999999999999755 499999999999999999876442 245799999998553 23357899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+...-.. +-...+++. +++.|+|||++++..
T Consensus 120 ~~~~l~~-------~~~~~~l~~-~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 120 SEGAIYN-------IGFERGMNE-WSKYLKKGGFIAVSE 150 (257)
T ss_dssp EESCSCC-------CCHHHHHHH-HHTTEEEEEEEEEEE
T ss_pred ecChHhh-------cCHHHHHHH-HHHHcCCCcEEEEEE
Confidence 9864322 224578898 799999999998764
No 79
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.34 E-value=1.1e-11 Score=109.05 Aligned_cols=111 Identities=16% Similarity=0.209 Sum_probs=85.5
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCce---eE
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESY---DV 178 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~f---Dv 178 (257)
++.+|||||||+|.++..+++. +..+|+++|+++.+++.|+++....+ ...+++++.+|+.+.+. ++| |+
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~---l~~~v~~~~~D~~~~~~---~~f~~~D~ 195 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHG---VSDRFFVRKGEFLEPFK---EKFASIEM 195 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTT---CTTSEEEEESSTTGGGG---GGTTTCCE
T ss_pred CCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcC---CCCceEEEECcchhhcc---cccCCCCE
Confidence 4579999999999999999988 56799999999999999999987543 23479999999988664 478 99
Q ss_pred EEEcCCCC-CC--------CCcccCCc----hHHHHHHHHc-CcCCCCcEEEEecC
Q 025141 179 IIGDLADP-IE--------GGPCYKLY----TKSFYEFVVK-PRLNPEGIFVTQAG 220 (257)
Q Consensus 179 Ii~D~~~~-~~--------~~p~~~L~----t~ef~~~~~~-~~L~pgGil~~~~~ 220 (257)
|+++++-. .. ..|...|+ ..++++. +. +.|+|||.+++..+
T Consensus 196 IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~-i~~~~l~pgG~l~~e~~ 250 (284)
T 1nv8_A 196 ILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYRE-FFGRYDTSGKIVLMEIG 250 (284)
T ss_dssp EEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHH-HHHHCCCTTCEEEEECC
T ss_pred EEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHH-HHHhcCCCCCEEEEEEC
Confidence 99997621 10 01100111 1278999 68 99999999998764
No 80
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.34 E-value=2.6e-12 Score=108.51 Aligned_cols=106 Identities=19% Similarity=0.272 Sum_probs=82.7
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++.+||+||||+|..+..+++..+..+++++|+++.+++.|++.+... ++++++.+|+.+.... ++||+|+
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~d~~~~~~~--~~fD~v~ 114 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGN------LKVKYIEADYSKYDFE--EKYDMVV 114 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSC------TTEEEEESCTTTCCCC--SCEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccC------CCEEEEeCchhccCCC--CCceEEE
Confidence 4568999999999999999998754579999999999999999987532 3899999998775322 7899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+...-.. .+ .....++++. +++.|+|||++++..
T Consensus 115 ~~~~l~~--~~--~~~~~~~l~~-~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 115 SALSIHH--LE--DEDKKELYKR-SYSILKESGIFINAD 148 (234)
T ss_dssp EESCGGG--SC--HHHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EeCcccc--CC--HHHHHHHHHH-HHHhcCCCcEEEEEE
Confidence 9854221 01 0112358898 799999999998754
No 81
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.33 E-value=1.5e-11 Score=112.67 Aligned_cols=128 Identities=19% Similarity=0.234 Sum_probs=95.9
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~ 181 (257)
++.+|||+|||+|.++..+++. + .+|++||+|+.+++.|++++..++ .+++++.+|+.+.... .++||+|++
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~-g-~~V~gvDis~~al~~A~~n~~~~~-----~~v~~~~~D~~~~~~~-~~~fD~Ii~ 304 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM-G-AEVVGVEDDLASVLSLQKGLEANA-----LKAQALHSDVDEALTE-EARFDIIVT 304 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT-T-CEEEEEESBHHHHHHHHHHHHHTT-----CCCEEEECSTTTTSCT-TCCEEEEEE
T ss_pred CCCEEEEEeeeCCHHHHHHHHc-C-CEEEEEECCHHHHHHHHHHHHHcC-----CCeEEEEcchhhcccc-CCCeEEEEE
Confidence 5679999999999999999986 3 599999999999999999987552 2489999999887542 478999999
Q ss_pred cCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCceEEE
Q 025141 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGCCA 248 (257)
Q Consensus 182 D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~ 248 (257)
+++-...... ..-...++++. ++++|+|||++++..... . .....+++.|..+...
T Consensus 305 npp~~~~~~~-~~~~~~~~l~~-~~~~LkpGG~l~iv~n~~---l------~~~~~l~~~f~~v~~l 360 (381)
T 3dmg_A 305 NPPFHVGGAV-ILDVAQAFVNV-AAARLRPGGVFFLVSNPF---L------KYEPLLEEKFGAFQTL 360 (381)
T ss_dssp CCCCCTTCSS-CCHHHHHHHHH-HHHHEEEEEEEEEEECTT---S------CHHHHHHHHHSCCEEE
T ss_pred CCchhhcccc-cHHHHHHHHHH-HHHhcCcCcEEEEEEcCC---C------ChHHHHHHhhccEEEE
Confidence 9764331000 11123578898 799999999999875432 1 2234566667777766
No 82
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.33 E-value=1.3e-11 Score=103.93 Aligned_cols=138 Identities=17% Similarity=0.169 Sum_probs=95.3
Q ss_pred CCCCeEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHH--hcCCCcee
Q 025141 101 PNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAEL--ESRKESYD 177 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l--~~~~~~fD 177 (257)
.+..+|||+|||+|.++..+++. .+..+|+++|+++.+++.++++.... ++++++.+|+.+.. ....++||
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~------~~v~~~~~d~~~~~~~~~~~~~~D 145 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER------RNIVPILGDATKPEEYRALVPKVD 145 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC------TTEEEEECCTTCGGGGTTTCCCEE
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc------CCCEEEEccCCCcchhhcccCCce
Confidence 35679999999999999999976 33469999999999999998876532 68999999997742 22346899
Q ss_pred EEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCC-CCC--ChHHHHHHHHHHhhhCCceEEEeecCc
Q 025141 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAG-IFS--HTEVFSCIYNTLRQVFKCGCCALFSSY 253 (257)
Q Consensus 178 vIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~-~~~--~~~~~~~~~~~l~~~F~~v~~~~~~~~ 253 (257)
+|++|.+.+. ....+++. +.+.|+|||.+++...... ... ........+..+.+.|..+......++
T Consensus 146 ~v~~~~~~~~--------~~~~~l~~-~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~f~~~~~~~~~~~ 215 (227)
T 1g8a_A 146 VIFEDVAQPT--------QAKILIDN-AEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVERELSEYFEVIERLNLEPY 215 (227)
T ss_dssp EEEECCCSTT--------HHHHHHHH-HHHHEEEEEEEEEEEEGGGTCTTSCHHHHHHHHHHHHHTTSEEEEEEECTTT
T ss_pred EEEECCCCHh--------HHHHHHHH-HHHhcCCCCEEEEEEecCCCCCCCChhhhhHHHHHHHHhhceeeeEeccCcc
Confidence 9999876321 12355888 7999999998887531110 011 122333344445555877777666544
No 83
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.33 E-value=8.8e-11 Score=94.55 Aligned_cols=119 Identities=14% Similarity=0.094 Sum_probs=92.1
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++.+||++|||+|..+..+++ + ..+++++|+++.+++.+++++...+ .++++++.+|+.+.+.. ++||+|+
T Consensus 34 ~~~~~vLdiG~G~G~~~~~l~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~~~~~~d~~~~~~~--~~~D~i~ 105 (183)
T 2yxd_A 34 NKDDVVVDVGCGSGGMTVEIAK-R-CKFVYAIDYLDGAIEVTKQNLAKFN----IKNCQIIKGRAEDVLDK--LEFNKAF 105 (183)
T ss_dssp CTTCEEEEESCCCSHHHHHHHT-T-SSEEEEEECSHHHHHHHHHHHHHTT----CCSEEEEESCHHHHGGG--CCCSEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHh-c-CCeEEEEeCCHHHHHHHHHHHHHcC----CCcEEEEECCccccccC--CCCcEEE
Confidence 4567999999999999999998 3 4799999999999999999987542 26899999999885543 6899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCceE
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGC 246 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~F~~v~ 246 (257)
++.. . . ..++++. +++. |||.+++... .......+.+.+++..-.+.
T Consensus 106 ~~~~-~---~------~~~~l~~-~~~~--~gG~l~~~~~------~~~~~~~~~~~l~~~g~~~~ 152 (183)
T 2yxd_A 106 IGGT-K---N------IEKIIEI-LDKK--KINHIVANTI------VLENAAKIINEFESRGYNVD 152 (183)
T ss_dssp ECSC-S---C------HHHHHHH-HHHT--TCCEEEEEES------CHHHHHHHHHHHHHTTCEEE
T ss_pred ECCc-c---c------HHHHHHH-HhhC--CCCEEEEEec------ccccHHHHHHHHHHcCCeEE
Confidence 9865 1 1 2577887 6666 9999988642 34456677777877643333
No 84
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.33 E-value=5.8e-12 Score=115.10 Aligned_cols=133 Identities=16% Similarity=0.172 Sum_probs=94.0
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~ 181 (257)
.+.+|||+|||+|.++..+++..+..+|++||+++.+++.+++++..++- -...+++++.+|+.+.+ ..++||+|++
T Consensus 222 ~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl-~~~~~v~~~~~D~~~~~--~~~~fD~Ii~ 298 (375)
T 4dcm_A 222 LEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMP-EALDRCEFMINNALSGV--EPFRFNAVLC 298 (375)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCG-GGGGGEEEEECSTTTTC--CTTCEEEEEE
T ss_pred CCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCC-CcCceEEEEechhhccC--CCCCeeEEEE
Confidence 34899999999999999999976567999999999999999999875421 01236888999998754 3468999999
Q ss_pred cCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCceEEE
Q 025141 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGCCA 248 (257)
Q Consensus 182 D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~ 248 (257)
|++-...... ..-...++++. +++.|+|||++++-.... .. ....+++.|..+...
T Consensus 299 nppfh~~~~~-~~~~~~~~l~~-~~~~LkpgG~l~iv~n~~---~~------~~~~l~~~fg~~~~~ 354 (375)
T 4dcm_A 299 NPPFHQQHAL-TDNVAWEMFHH-ARRCLKINGELYIVANRH---LD------YFHKLKKIFGNCTTI 354 (375)
T ss_dssp CCCC--------CCHHHHHHHH-HHHHEEEEEEEEEEEETT---SC------HHHHHHHHHSCCEEE
T ss_pred CCCcccCccc-CHHHHHHHHHH-HHHhCCCCcEEEEEEECC---cC------HHHHHHHhcCCEEEE
Confidence 9863321011 11223578998 799999999998854221 11 124466667666653
No 85
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.33 E-value=8.2e-12 Score=108.78 Aligned_cols=125 Identities=19% Similarity=0.215 Sum_probs=93.8
Q ss_pred CCCCeEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvI 179 (257)
.++.+||++|||+|.++..+++. .+..+|+++|+++.+++.|++++...+ ..++++++.+|+.+.+ ..++||+|
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~--~~~~~D~V 185 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWG---LIERVTIKVRDISEGF--DEKDVDAL 185 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTT---CGGGEEEECCCGGGCC--SCCSEEEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC---CCCCEEEEECCHHHcc--cCCccCEE
Confidence 45679999999999999999986 445799999999999999999876432 2358999999998763 23679999
Q ss_pred EEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhh-CCceEEE
Q 025141 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV-FKCGCCA 248 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~-F~~v~~~ 248 (257)
++|++++ .++++. +.+.|+|||++++.... .....++.+.|++. |..+..+
T Consensus 186 ~~~~~~~-----------~~~l~~-~~~~L~pgG~l~~~~~~------~~~~~~~~~~l~~~gf~~~~~~ 237 (277)
T 1o54_A 186 FLDVPDP-----------WNYIDK-CWEALKGGGRFATVCPT------TNQVQETLKKLQELPFIRIEVW 237 (277)
T ss_dssp EECCSCG-----------GGTHHH-HHHHEEEEEEEEEEESS------HHHHHHHHHHHHHSSEEEEEEE
T ss_pred EECCcCH-----------HHHHHH-HHHHcCCCCEEEEEeCC------HHHHHHHHHHHHHCCCceeEEE
Confidence 9987543 145677 68899999999987521 23445666667654 5544444
No 86
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.33 E-value=7.5e-12 Score=103.69 Aligned_cols=102 Identities=14% Similarity=0.132 Sum_probs=82.8
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~ 181 (257)
++.+||++|||+|..+..+++..+..+++++|+++.+++.+++++...+ .++++++.+|+.++. ..++||+|++
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~--~~~~~D~i~~ 138 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELK----LENIEPVQSRVEEFP--SEPPFDGVIS 138 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTT----CSSEEEEECCTTTSC--CCSCEEEEEC
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcC----CCCeEEEecchhhCC--ccCCcCEEEE
Confidence 4679999999999999999886455799999999999999999886542 245999999987754 2468999998
Q ss_pred cCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecC
Q 025141 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (257)
Q Consensus 182 D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~ 220 (257)
+... . ...+++. +++.|+|||.+++..+
T Consensus 139 ~~~~-----~-----~~~~l~~-~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 139 RAFA-----S-----LNDMVSW-CHHLPGEQGRFYALKG 166 (207)
T ss_dssp SCSS-----S-----HHHHHHH-HTTSEEEEEEEEEEES
T ss_pred eccC-----C-----HHHHHHH-HHHhcCCCcEEEEEeC
Confidence 6431 1 2478888 7999999999998764
No 87
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.33 E-value=2.1e-11 Score=112.09 Aligned_cols=133 Identities=11% Similarity=0.021 Sum_probs=92.8
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~ 181 (257)
++++|||+|||+|..+..+++. +. +|++||+++.+++.|++++..++- + .++..+|+++++....++||+|++
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~-ga-~V~avDis~~al~~a~~n~~~ng~---~--~~~~~~D~~~~l~~~~~~fD~Ii~ 286 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARK-GA-YALAVDKDLEALGVLDQAALRLGL---R--VDIRHGEALPTLRGLEGPFHHVLL 286 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHHTC---C--CEEEESCHHHHHHTCCCCEEEEEE
T ss_pred CCCeEEEcccchhHHHHHHHHc-CC-eEEEEECCHHHHHHHHHHHHHhCC---C--CcEEEccHHHHHHHhcCCCCEEEE
Confidence 4789999999999999999985 43 599999999999999999987641 1 356799999998765555999999
Q ss_pred cCCCCCCCCcccCCc-----hHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHH-HHHHHHhhhCCceE
Q 025141 182 DLADPIEGGPCYKLY-----TKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFS-CIYNTLRQVFKCGC 246 (257)
Q Consensus 182 D~~~~~~~~p~~~L~-----t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~-~~~~~l~~~F~~v~ 246 (257)
|++.-.. .. ..+. ..++++. +.+.|+|||++++-..++ ....+.+. .+.+.+.+.-..+.
T Consensus 287 dpP~f~~-~~-~~~~~~~~~~~~ll~~-a~~~LkpGG~Lv~~s~s~--~~~~~~f~~~v~~a~~~~g~~~~ 352 (393)
T 4dmg_A 287 DPPTLVK-RP-EELPAMKRHLVDLVRE-ALRLLAEEGFLWLSSCSY--HLRLEDLLEVARRAAADLGRRLR 352 (393)
T ss_dssp CCCCCCS-SG-GGHHHHHHHHHHHHHH-HHHTEEEEEEEEEEECCT--TSCHHHHHHHHHHHHHHHTCCEE
T ss_pred CCCcCCC-CH-HHHHHHHHHHHHHHHH-HHHhcCCCCEEEEEECCC--CCCHHHHHHHHHHHHHHhCCeEE
Confidence 9864110 11 1111 1467777 689999999998665444 22333333 33344444433333
No 88
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.33 E-value=1.3e-11 Score=105.45 Aligned_cols=125 Identities=13% Similarity=0.126 Sum_probs=94.3
Q ss_pred CCCCeEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhhhhc-cCCCCCCCeEEEEcchHHHHhcCCCceeE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVN-KEAFSDPRLELVINDARAELESRKESYDV 178 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~-~~~~~~~rv~i~~~Da~~~l~~~~~~fDv 178 (257)
.+..+||++|||+|.++..+++. .+..+|+++|+++.+++.|++++... + .++++++.+|+.+. .-..++||+
T Consensus 95 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g----~~~v~~~~~d~~~~-~~~~~~~D~ 169 (258)
T 2pwy_A 95 APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ----VENVRFHLGKLEEA-ELEEAAYDG 169 (258)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEESCGGGC-CCCTTCEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC----CCCEEEEECchhhc-CCCCCCcCE
Confidence 45679999999999999999986 44579999999999999999988643 2 36899999998875 112367999
Q ss_pred EEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhh-CCceEEE
Q 025141 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV-FKCGCCA 248 (257)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~-F~~v~~~ 248 (257)
|++|++++ .++++. +.+.|+|||.+++... ......++.+.|++. |..+..+
T Consensus 170 v~~~~~~~-----------~~~l~~-~~~~L~~gG~l~~~~~------~~~~~~~~~~~l~~~gf~~~~~~ 222 (258)
T 2pwy_A 170 VALDLMEP-----------WKVLEK-AALALKPDRFLVAYLP------NITQVLELVRAAEAHPFRLERVL 222 (258)
T ss_dssp EEEESSCG-----------GGGHHH-HHHHEEEEEEEEEEES------CHHHHHHHHHHHTTTTEEEEEEE
T ss_pred EEECCcCH-----------HHHHHH-HHHhCCCCCEEEEEeC------CHHHHHHHHHHHHHCCCceEEEE
Confidence 99986532 145677 6889999999998652 234456777777754 5544443
No 89
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.32 E-value=6.6e-12 Score=104.37 Aligned_cols=101 Identities=18% Similarity=0.211 Sum_probs=81.2
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++.+||+||||+|..+..+++. ..+|+++|+++.+++.|++++...+ .++++++.+|+.+.... .++||+|+
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~~~-~~~~D~i~ 148 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLD----LHNVSTRHGDGWQGWQA-RAPFDAII 148 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEESCGGGCCGG-GCCEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcC----CCceEEEECCcccCCcc-CCCccEEE
Confidence 46789999999999999999987 3699999999999999999987542 34799999999875533 47899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCC
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGP 221 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~ 221 (257)
++...+. .+ .. +.+.|+|||++++....
T Consensus 149 ~~~~~~~--~~----------~~-~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 149 VTAAPPE--IP----------TA-LMTQLDEGGILVLPVGE 176 (210)
T ss_dssp ESSBCSS--CC----------TH-HHHTEEEEEEEEEEECS
T ss_pred Eccchhh--hh----------HH-HHHhcccCcEEEEEEcC
Confidence 9865332 11 14 57799999999987654
No 90
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.32 E-value=7e-12 Score=109.25 Aligned_cols=125 Identities=14% Similarity=0.131 Sum_probs=94.2
Q ss_pred CCCCeEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhhhhc-cCCCCCCCeEEEEcchHHHHhcCCCceeE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVN-KEAFSDPRLELVINDARAELESRKESYDV 178 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~-~~~~~~~rv~i~~~Da~~~l~~~~~~fDv 178 (257)
.+..+|||+|||+|..+..+++. .+..+|+++|+++.+++.|++++... + .++++++.+|+.+.+ ..++||+
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g----~~~v~~~~~d~~~~~--~~~~fD~ 182 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYD----IGNVRTSRSDIADFI--SDQMYDA 182 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSC----CTTEEEECSCTTTCC--CSCCEEE
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCC----CCcEEEEECchhccC--cCCCccE
Confidence 45679999999999999999886 44579999999999999999988643 2 368999999998743 2468999
Q ss_pred EEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhh-CCceEEEe
Q 025141 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV-FKCGCCAL 249 (257)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~-F~~v~~~~ 249 (257)
|++|.+++ .++++. +.+.|+|||++++... .......+.+.+++. |..+..+.
T Consensus 183 Vi~~~~~~-----------~~~l~~-~~~~LkpgG~l~i~~~------~~~~~~~~~~~l~~~Gf~~~~~~~ 236 (275)
T 1yb2_A 183 VIADIPDP-----------WNHVQK-IASMMKPGSVATFYLP------NFDQSEKTVLSLSASGMHHLETVE 236 (275)
T ss_dssp EEECCSCG-----------GGSHHH-HHHTEEEEEEEEEEES------SHHHHHHHHHHSGGGTEEEEEEEE
T ss_pred EEEcCcCH-----------HHHHHH-HHHHcCCCCEEEEEeC------CHHHHHHHHHHHHHCCCeEEEEEE
Confidence 99976532 245677 6899999999998652 123455666667664 55555443
No 91
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.32 E-value=1.3e-11 Score=113.31 Aligned_cols=114 Identities=17% Similarity=0.157 Sum_probs=88.8
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc---CCCceeE
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES---RKESYDV 178 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~---~~~~fDv 178 (257)
++++||++|||+|..+..+++. +..+|++||+++.+++.|++++..++ .+++++++.+|+.+++.. ..++||+
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~---~~~~v~~~~~d~~~~~~~~~~~~~~fD~ 292 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNG---VEDRMKFIVGSAFEEMEKLQKKGEKFDI 292 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTT---CGGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcC---CCccceEEECCHHHHHHHHHhhCCCCCE
Confidence 6789999999999999999986 45699999999999999999988663 123899999999998754 2578999
Q ss_pred EEEcCCCCCCCCcccCCc-----hHHHHHHHHcCcCCCCcEEEEecCCC
Q 025141 179 IIGDLADPIEGGPCYKLY-----TKSFYEFVVKPRLNPEGIFVTQAGPA 222 (257)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~-----t~ef~~~~~~~~L~pgGil~~~~~~~ 222 (257)
|++|++.... .. ..+. ..+++.. +.+.|+|||++++.+.++
T Consensus 293 Vi~dpP~~~~-~~-~~~~~~~~~~~~~l~~-~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 293 VVLDPPAFVQ-HE-KDLKAGLRAYFNVNFA-GLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp EEECCCCSCS-SG-GGHHHHHHHHHHHHHH-HHTTEEEEEEEEEEECCT
T ss_pred EEECCCCCCC-CH-HHHHHHHHHHHHHHHH-HHHhcCCCcEEEEEECCC
Confidence 9999874211 11 1111 2467787 689999999888776544
No 92
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.32 E-value=1.3e-11 Score=104.89 Aligned_cols=125 Identities=12% Similarity=0.079 Sum_probs=94.1
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++.+||++|||+|.++..+++. ..+|+++|+++..++.|++++...+ .+++++++.+|+.+... ..+.||+|+
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~~~-~~~~~D~v~ 163 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFN---LGKNVKFFNVDFKDAEV-PEGIFHAAF 163 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTT---CCTTEEEECSCTTTSCC-CTTCBSEEE
T ss_pred CCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcC---CCCcEEEEEcChhhccc-CCCcccEEE
Confidence 35679999999999999999987 4699999999999999999876432 23689999999887541 236799999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCceEEEe
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGCCAL 249 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~ 249 (257)
++++++ .++++. +.+.|+|||.+++... ......++.+.+++.|..+..+.
T Consensus 164 ~~~~~~-----------~~~l~~-~~~~L~~gG~l~~~~~------~~~~~~~~~~~l~~~f~~~~~~~ 214 (248)
T 2yvl_A 164 VDVREP-----------WHYLEK-VHKSLMEGAPVGFLLP------TANQVIKLLESIENYFGNLEVVE 214 (248)
T ss_dssp ECSSCG-----------GGGHHH-HHHHBCTTCEEEEEES------SHHHHHHHHHHSTTTEEEEEEEE
T ss_pred ECCcCH-----------HHHHHH-HHHHcCCCCEEEEEeC------CHHHHHHHHHHHHhhCCcceEEE
Confidence 986532 244677 6889999999998752 23445566666665566555443
No 93
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.31 E-value=1.6e-11 Score=105.97 Aligned_cols=129 Identities=15% Similarity=0.110 Sum_probs=98.7
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++++||++|||+|.++..+++.. . +|+++|+|+.+++.+++++..++ .. ++++.+|+.+.+. .++||+|+
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g-~-~v~gvDi~~~~v~~a~~n~~~~~----~~-v~~~~~d~~~~~~--~~~fD~Vv 189 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLG-G-KALGVDIDPMVLPQAEANAKRNG----VR-PRFLEGSLEAALP--FGPFDLLV 189 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTT-C-EEEEEESCGGGHHHHHHHHHHTT----CC-CEEEESCHHHHGG--GCCEEEEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHhC-C-eEEEEECCHHHHHHHHHHHHHcC----Cc-EEEEECChhhcCc--CCCCCEEE
Confidence 467899999999999999988863 3 99999999999999999987653 12 8999999988653 36899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhh-CCceEEEeecCcc
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV-FKCGCCALFSSYS 254 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~-F~~v~~~~~~~~~ 254 (257)
++...+ . ...+++. +++.|+|||.+++.... ......+.+.+++. |..+.......|.
T Consensus 190 ~n~~~~-------~--~~~~l~~-~~~~LkpgG~lils~~~------~~~~~~v~~~l~~~Gf~~~~~~~~~~W~ 248 (254)
T 2nxc_A 190 ANLYAE-------L--HAALAPR-YREALVPGGRALLTGIL------KDRAPLVREAMAGAGFRPLEEAAEGEWV 248 (254)
T ss_dssp EECCHH-------H--HHHHHHH-HHHHEEEEEEEEEEEEE------GGGHHHHHHHHHHTTCEEEEEEEETTEE
T ss_pred ECCcHH-------H--HHHHHHH-HHHHcCCCCEEEEEeec------cCCHHHHHHHHHHCCCEEEEEeccCCeE
Confidence 875321 1 2577888 79999999999885321 12245666777776 8777777767764
No 94
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.31 E-value=1.5e-11 Score=104.32 Aligned_cols=103 Identities=17% Similarity=0.162 Sum_probs=80.5
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHh--cCCCceeE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELE--SRKESYDV 178 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~--~~~~~fDv 178 (257)
.+..+|||||||+|.++..+++..+..+|++||+++.+++.++++... .++++++.+|+.+... ...++||+
T Consensus 73 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~------~~~v~~~~~d~~~~~~~~~~~~~~D~ 146 (230)
T 1fbn_A 73 KRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAE------RENIIPILGDANKPQEYANIVEKVDV 146 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTT------CTTEEEEECCTTCGGGGTTTSCCEEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhc------CCCeEEEECCCCCcccccccCccEEE
Confidence 356799999999999999999874457999999999999999987542 2689999999876221 11268999
Q ss_pred EEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
|+.+.+++. ....+++. +.+.|+|||++++.
T Consensus 147 v~~~~~~~~--------~~~~~l~~-~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 147 IYEDVAQPN--------QAEILIKN-AKWFLKKGGYGMIA 177 (230)
T ss_dssp EEECCCSTT--------HHHHHHHH-HHHHEEEEEEEEEE
T ss_pred EEEecCChh--------HHHHHHHH-HHHhCCCCcEEEEE
Confidence 998764321 13567888 79999999998873
No 95
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.31 E-value=4.6e-12 Score=105.77 Aligned_cols=143 Identities=15% Similarity=0.071 Sum_probs=100.0
Q ss_pred CCCCeEEEEeccchHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvI 179 (257)
.++.+||+||||+|..+..+++.. +..+|+++|+++.+++.+++.+...+ .++++++.+|+.+. ....++||+|
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~~d~~~~-~~~~~~fD~v 110 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLG----LKNVEVLKSEENKI-PLPDNTVDFI 110 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHT----CTTEEEEECBTTBC-SSCSSCEEEE
T ss_pred CCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC----CCcEEEEecccccC-CCCCCCeeEE
Confidence 456799999999999999998863 44699999999999999999886542 34899999998664 2335789999
Q ss_pred EEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCC-CC-----CChHHHHHHHHHHhhh-CCceEEEeecC
Q 025141 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAG-IF-----SHTEVFSCIYNTLRQV-FKCGCCALFSS 252 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~-~~-----~~~~~~~~~~~~l~~~-F~~v~~~~~~~ 252 (257)
++...-.. .+ ....+++. +++.|+|||.+++..-.+. .. ...-...++.+.+++. |..+.......
T Consensus 111 ~~~~~l~~--~~----~~~~~l~~-~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 183 (219)
T 3dh0_A 111 FMAFTFHE--LS----EPLKFLEE-LKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVEVGK 183 (219)
T ss_dssp EEESCGGG--CS----SHHHHHHH-HHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEEETT
T ss_pred Eeehhhhh--cC----CHHHHHHH-HHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEeeCC
Confidence 98754221 11 13578898 7999999999887531110 00 0011234566667766 77777666554
Q ss_pred ccc
Q 025141 253 YSF 255 (257)
Q Consensus 253 ~~~ 255 (257)
..|
T Consensus 184 ~~~ 186 (219)
T 3dh0_A 184 YCF 186 (219)
T ss_dssp TEE
T ss_pred ceE
Confidence 433
No 96
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.31 E-value=6e-12 Score=105.39 Aligned_cols=106 Identities=20% Similarity=0.267 Sum_probs=81.6
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
+.+.+||+||||+|..+..+++..+ +++++|+++.+++.|++++... .++++++.+|+.+. ....++||+|+
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~-~~~~~~~D~v~ 108 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSR-----ESNVEFIVGDARKL-SFEDKTFDYVI 108 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT-----TCCCEEEECCTTSC-CSCTTCEEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhc-----CCCceEEECchhcC-CCCCCcEEEEE
Confidence 4478999999999999999988643 9999999999999999987654 26899999998763 22346899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+...-... .. .-..++++. +++.|+|||.+++..
T Consensus 109 ~~~~~~~~-~~---~~~~~~l~~-~~~~L~~gG~l~~~~ 142 (227)
T 1ve3_A 109 FIDSIVHF-EP---LELNQVFKE-VRRVLKPSGKFIMYF 142 (227)
T ss_dssp EESCGGGC-CH---HHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EcCchHhC-CH---HHHHHHHHH-HHHHcCCCcEEEEEe
Confidence 88541110 10 112578888 799999999998753
No 97
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.31 E-value=6.4e-12 Score=107.97 Aligned_cols=104 Identities=18% Similarity=0.265 Sum_probs=81.5
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++.+|||||||+|.++..+++.. .+|+++|+++.+++.|++.+...+ .++++++.+|+.+. ...+++||+|+
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~----~~~v~~~~~d~~~l-~~~~~~fD~V~ 108 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFV--KKVVAFDLTEDILKVARAFIEGNG----HQQVEYVQGDAEQM-PFTDERFHIVT 108 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEECCC-CC-CSCTTCEEEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcC----CCceEEEEecHHhC-CCCCCCEEEEE
Confidence 467899999999999999998864 499999999999999999876432 35899999998763 33457899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
+...-.+... ...++++ ++++|+|||.+++.
T Consensus 109 ~~~~l~~~~d------~~~~l~~-~~r~LkpgG~l~~~ 139 (260)
T 1vl5_A 109 CRIAAHHFPN------PASFVSE-AYRVLKKGGQLLLV 139 (260)
T ss_dssp EESCGGGCSC------HHHHHHH-HHHHEEEEEEEEEE
T ss_pred EhhhhHhcCC------HHHHHHH-HHHHcCCCCEEEEE
Confidence 8854322111 2478898 79999999999874
No 98
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.30 E-value=2.9e-11 Score=105.59 Aligned_cols=116 Identities=16% Similarity=0.085 Sum_probs=87.3
Q ss_pred CCCCeEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc---CCCce
Q 025141 101 PNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES---RKESY 176 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~---~~~~f 176 (257)
.+..+|||+|||+|+.+..+++. ++..+|+++|+++..++.+++++...+ -++++++.+|+.++... ..++|
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g----~~~v~~~~~D~~~~~~~~~~~~~~f 157 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMG----VLNTIIINADMRKYKDYLLKNEIFF 157 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEESCHHHHHHHHHHTTCCE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhC----CCcEEEEeCChHhcchhhhhccccC
Confidence 45679999999999999998875 333799999999999999999987542 24899999999987642 25689
Q ss_pred eEEEEcCCCCCCCCcc-------------cCCchHHHHHHHHcCcCCCCcEEEEecCCC
Q 025141 177 DVIIGDLADPIEGGPC-------------YKLYTKSFYEFVVKPRLNPEGIFVTQAGPA 222 (257)
Q Consensus 177 DvIi~D~~~~~~~~p~-------------~~L~t~ef~~~~~~~~L~pgGil~~~~~~~ 222 (257)
|+|++|++-... +.. ..-...++++. +.+.|||||.++....+.
T Consensus 158 D~Vl~d~Pcs~~-g~~~~~p~~~~~~~~~~~~~~~~~l~~-~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 158 DKILLDAPCSGN-IIKDKNRNVSEEDIKYCSLRQKELIDI-GIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp EEEEEEECCC-------------HHHHTGGGTCHHHHHHH-HHHHEEEEEEEEEEESCC
T ss_pred CEEEEcCCCCCC-cccccCCCCCHHHHHHHHHHHHHHHHH-HHHhCCCCCEEEEEECCC
Confidence 999999763210 100 00123678888 789999999998876443
No 99
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.30 E-value=2.8e-12 Score=112.68 Aligned_cols=102 Identities=18% Similarity=0.099 Sum_probs=84.7
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.+.++|||+|||+|.++..++++. .++|+++|+||..++.++++...++ -..+++++.+|++++.. .+.||.|+
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~g-~~~V~avD~np~a~~~~~~N~~~N~---v~~~v~~~~~D~~~~~~--~~~~D~Vi 197 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVYG-KAKVIAIEKDPYTFKFLVENIHLNK---VEDRMSAYNMDNRDFPG--ENIADRIL 197 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHHT-CCEEEEECCCHHHHHHHHHHHHHTT---CTTTEEEECSCTTTCCC--CSCEEEEE
T ss_pred CCCCEEEEecCcCcHHHHHHHHhc-CCeEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEeCcHHHhcc--ccCCCEEE
Confidence 567899999999999999998874 4699999999999999999998775 35689999999998864 46899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
++++.. +.+|+.. +.+.|+|||++.++.
T Consensus 198 ~~~p~~----------~~~~l~~-a~~~lk~gG~ih~~~ 225 (278)
T 3k6r_A 198 MGYVVR----------THEFIPK-ALSIAKDGAIIHYHN 225 (278)
T ss_dssp ECCCSS----------GGGGHHH-HHHHEEEEEEEEEEE
T ss_pred ECCCCc----------HHHHHHH-HHHHcCCCCEEEEEe
Confidence 997521 2356777 678899999987653
No 100
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.30 E-value=2.2e-11 Score=101.65 Aligned_cols=102 Identities=17% Similarity=0.071 Sum_probs=79.8
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++.+||+||||+|..+..+++. + .+++++|+++.+++.+++.++ ++++++.+|+.+... . ++||+|+
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~-~-~~v~~vD~s~~~~~~a~~~~~--------~~~~~~~~d~~~~~~-~-~~fD~v~ 111 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLA-G-RTVYGIEPSREMRMIAKEKLP--------KEFSITEGDFLSFEV-P-TSIDTIV 111 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHT-T-CEEEEECSCHHHHHHHHHHSC--------TTCCEESCCSSSCCC-C-SCCSEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHhC-C-CeEEEEeCCHHHHHHHHHhCC--------CceEEEeCChhhcCC-C-CCeEEEE
Confidence 36789999999999999999986 3 599999999999999998754 478999999877532 2 7899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+...-.. .+ ......+++. +++.|+|||.+++..
T Consensus 112 ~~~~l~~--~~--~~~~~~~l~~-~~~~LkpgG~l~i~~ 145 (220)
T 3hnr_A 112 STYAFHH--LT--DDEKNVAIAK-YSQLLNKGGKIVFAD 145 (220)
T ss_dssp EESCGGG--SC--HHHHHHHHHH-HHHHSCTTCEEEEEE
T ss_pred ECcchhc--CC--hHHHHHHHHH-HHHhcCCCCEEEEEe
Confidence 9854221 11 1112348888 799999999998864
No 101
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.30 E-value=9.9e-12 Score=109.22 Aligned_cols=107 Identities=12% Similarity=0.134 Sum_probs=84.1
Q ss_pred CCCCeEEEEeccchHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcC-----CC
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR-----KE 174 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~-----~~ 174 (257)
.++.+|||||||+|..+..+++.. +..+|+++|+++.+++.|++.+.... ...++++++.+|+.+.-... .+
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~~~~~ 112 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSP--DTYKNVSFKISSSDDFKFLGADSVDKQ 112 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC---CCTTEEEEECCTTCCGGGCTTTTTSS
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcc--CCCCceEEEEcCHHhCCccccccccCC
Confidence 467899999999999999999642 45799999999999999999876431 12579999999997753222 26
Q ss_pred ceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEE
Q 025141 175 SYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (257)
Q Consensus 175 ~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~ 217 (257)
+||+|++...-++ +--..+++. ++++|+|||.+++
T Consensus 113 ~fD~V~~~~~l~~-------~~~~~~l~~-~~~~LkpgG~l~i 147 (299)
T 3g5t_A 113 KIDMITAVECAHW-------FDFEKFQRS-AYANLRKDGTIAI 147 (299)
T ss_dssp CEEEEEEESCGGG-------SCHHHHHHH-HHHHEEEEEEEEE
T ss_pred CeeEEeHhhHHHH-------hCHHHHHHH-HHHhcCCCcEEEE
Confidence 8999999754222 234678998 7999999999987
No 102
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.29 E-value=2.4e-11 Score=110.76 Aligned_cols=105 Identities=18% Similarity=0.237 Sum_probs=82.5
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-CCCceeEEE
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYDVII 180 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~-~~~~fDvIi 180 (257)
++++||||| |+|.++..+++..+..+|++||+|+.+++.|++++...+ + .+++++.+|+.+.+.. ..++||+|+
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g--~--~~v~~~~~D~~~~l~~~~~~~fD~Vi 246 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIG--Y--EDIEIFTFDLRKPLPDYALHKFDTFI 246 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHT--C--CCEEEECCCTTSCCCTTTSSCBSEEE
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC--C--CCEEEEEChhhhhchhhccCCccEEE
Confidence 468999999 999999999886444699999999999999999987553 1 2899999999885543 346899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCc-EEEEec
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEG-IFVTQA 219 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgG-il~~~~ 219 (257)
+|++-. +. . ...+++. +.+.|+||| ++++.+
T Consensus 247 ~~~p~~----~~-~--~~~~l~~-~~~~LkpgG~~~~~~~ 278 (373)
T 2qm3_A 247 TDPPET----LE-A--IRAFVGR-GIATLKGPRCAGYFGI 278 (373)
T ss_dssp ECCCSS----HH-H--HHHHHHH-HHHTBCSTTCEEEEEE
T ss_pred ECCCCc----hH-H--HHHHHHH-HHHHcccCCeEEEEEE
Confidence 997532 11 2 3788999 799999999 434443
No 103
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.29 E-value=5.9e-12 Score=108.98 Aligned_cols=107 Identities=15% Similarity=0.149 Sum_probs=85.2
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
+++.+||+||||+|..+..+++..+..+|+++|+++.+++.+++.+...+ .++++++.+|+.+.. ...++||+|+
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~~d~~~~~-~~~~~fD~v~ 110 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNG----IKNVKFLQANIFSLP-FEDSSFDHIF 110 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEECCGGGCC-SCTTCEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCcEEEEcccccCC-CCCCCeeEEE
Confidence 56789999999999999999987555799999999999999999886542 358999999987642 3457899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+...-..... ...+++. +++.|+|||++++..
T Consensus 111 ~~~~l~~~~~------~~~~l~~-~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 111 VCFVLEHLQS------PEEALKS-LKKVLKPGGTITVIE 142 (276)
T ss_dssp EESCGGGCSC------HHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EechhhhcCC------HHHHHHH-HHHHcCCCcEEEEEE
Confidence 8764322101 2478898 799999999998753
No 104
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.29 E-value=1.9e-11 Score=109.41 Aligned_cols=122 Identities=12% Similarity=0.215 Sum_probs=87.9
Q ss_pred CCCCeEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhhhh-------ccCCCCCCCeEEEEcchHHHHhc-
Q 025141 101 PNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVV-------NKEAFSDPRLELVINDARAELES- 171 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~-------~~~~~~~~rv~i~~~Da~~~l~~- 171 (257)
.++.+|||+|||+|.++..+++. .+..+|+++|+++.+++.|++++.. +...-..++++++.+|+.+.+..
T Consensus 104 ~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~ 183 (336)
T 2b25_A 104 NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDI 183 (336)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC---
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccccc
Confidence 45689999999999999999886 3447999999999999999998763 11000136899999999876432
Q ss_pred CCCceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhh
Q 025141 172 RKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQ 240 (257)
Q Consensus 172 ~~~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~ 240 (257)
..++||+|++|.++++ .+++. +.+.|+|||.+++... .........+.+++
T Consensus 184 ~~~~fD~V~~~~~~~~-----------~~l~~-~~~~LkpgG~lv~~~~------~~~~~~~~~~~l~~ 234 (336)
T 2b25_A 184 KSLTFDAVALDMLNPH-----------VTLPV-FYPHLKHGGVCAVYVV------NITQVIELLDGIRT 234 (336)
T ss_dssp ----EEEEEECSSSTT-----------TTHHH-HGGGEEEEEEEEEEES------SHHHHHHHHHHHHH
T ss_pred CCCCeeEEEECCCCHH-----------HHHHH-HHHhcCCCcEEEEEeC------CHHHHHHHHHHHHh
Confidence 2357999999876543 14677 7999999999997642 23445566666664
No 105
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.29 E-value=3.2e-11 Score=103.31 Aligned_cols=137 Identities=15% Similarity=0.132 Sum_probs=99.1
Q ss_pred CCCCeEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc--CCCcee
Q 025141 101 PNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES--RKESYD 177 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~--~~~~fD 177 (257)
.+..+||+||||+|.++..+++. .+..+|++||+++++++.+++... ..+++..+.+|+...-.. ..+.+|
T Consensus 76 kpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~------~~~ni~~V~~d~~~p~~~~~~~~~vD 149 (233)
T 4df3_A 76 KEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVR------DRRNIFPILGDARFPEKYRHLVEGVD 149 (233)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHST------TCTTEEEEESCTTCGGGGTTTCCCEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhH------hhcCeeEEEEeccCccccccccceEE
Confidence 45689999999999999999986 345799999999999999988754 236899999998765332 347899
Q ss_pred EEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCC--C-CCChHHHHHHHHHHhhh-CCceEEEeecC
Q 025141 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAG--I-FSHTEVFSCIYNTLRQV-FKCGCCALFSS 252 (257)
Q Consensus 178 vIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~--~-~~~~~~~~~~~~~l~~~-F~~v~~~~~~~ 252 (257)
+|++|.+.++ ....+++. +++.|||||.+++-..... . ......+.+..+.|++. |.-+......+
T Consensus 150 vVf~d~~~~~--------~~~~~l~~-~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~l~e~i~L~p 219 (233)
T 4df3_A 150 GLYADVAQPE--------QAAIVVRN-ARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLEIKDVVHLDP 219 (233)
T ss_dssp EEEECCCCTT--------HHHHHHHH-HHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCCEEEEEECTT
T ss_pred EEEEeccCCh--------hHHHHHHH-HHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCCEEEEEEccCC
Confidence 9999976543 13567888 7999999999886421100 0 01234566777778765 76666555444
No 106
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.29 E-value=1.5e-11 Score=106.21 Aligned_cols=107 Identities=15% Similarity=0.115 Sum_probs=83.4
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++.+||+||||+|..+..+++..+ .+|+++|+++.+++.+++.+...+ ..++++++.+|+.+. ...+++||+|+
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~-~~~~~~fD~v~ 134 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATARD-VRVTGISISRPQVNQANARATAAG---LANRVTFSYADAMDL-PFEDASFDAVW 134 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHSC-CEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEECCTTSC-CSCTTCEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhcC-CEEEEEeCCHHHHHHHHHHHHhcC---CCcceEEEECccccC-CCCCCCccEEE
Confidence 4568999999999999999988644 699999999999999999876432 245899999998763 23357899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+...-.. .+ -...+++. +++.|+|||.+++..
T Consensus 135 ~~~~l~~--~~----~~~~~l~~-~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 135 ALESLHH--MP----DRGRALRE-MARVLRPGGTVAIAD 166 (273)
T ss_dssp EESCTTT--SS----CHHHHHHH-HHTTEEEEEEEEEEE
T ss_pred Eechhhh--CC----CHHHHHHH-HHHHcCCCeEEEEEE
Confidence 8654222 11 12578898 799999999988754
No 107
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.29 E-value=6.7e-12 Score=104.66 Aligned_cols=132 Identities=11% Similarity=0.054 Sum_probs=91.9
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++++||+||||+|..+..+++.. .+|+++|+++.+++.+++++.. .++++++.+|+.+.. ..++||+|+
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~------~~~~~~~~~d~~~~~--~~~~fD~v~ 119 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRACQRTKR------WSHISWAATDILQFS--TAELFDLIV 119 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHHHHTTT------CSSEEEEECCTTTCC--CSCCEEEEE
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhccc------CCCeEEEEcchhhCC--CCCCccEEE
Confidence 446799999999999999998863 5999999999999999998753 248999999988765 457899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCC---CCCChHHHHHHHHHHhhhCCceE
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAG---IFSHTEVFSCIYNTLRQVFKCGC 246 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~---~~~~~~~~~~~~~~l~~~F~~v~ 246 (257)
+...-.....+ -.-..+++. +++.|+|||++++....+. .|........+.+.+.+.+..+.
T Consensus 120 ~~~~l~~~~~~---~~~~~~l~~-~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 184 (216)
T 3ofk_A 120 VAEVLYYLEDM---TQMRTAIDN-MVKMLAPGGHLVFGSARDATCRRWGHVAGAETVITILTEALTEVE 184 (216)
T ss_dssp EESCGGGSSSH---HHHHHHHHH-HHHTEEEEEEEEEEEECHHHHHHTTCSCCHHHHHHHHHHHSEEEE
T ss_pred EccHHHhCCCH---HHHHHHHHH-HHHHcCCCCEEEEEecCCCcchhhhhhhhHHHHHHHHHhhccceE
Confidence 97542110011 001467888 7999999999998431100 01111223345566666665543
No 108
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.28 E-value=1.2e-11 Score=107.05 Aligned_cols=109 Identities=12% Similarity=-0.013 Sum_probs=79.6
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhc-------c-CC-----CCCCCeEEEEcchHH
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVN-------K-EA-----FSDPRLELVINDARA 167 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~-------~-~~-----~~~~rv~i~~~Da~~ 167 (257)
.++.+||++|||+|..+..+++. + .+|++||+++.+++.|++..... . .. -..++++++.+|+.+
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~-G-~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADR-G-HTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHT-T-CEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred CCCCeEEEeCCCCcHHHHHHHHC-C-CeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 35689999999999999999986 4 48999999999999998765320 0 00 023689999999988
Q ss_pred HHhcCCCceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEE
Q 025141 168 ELESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFV 216 (257)
Q Consensus 168 ~l~~~~~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~ 216 (257)
.-....++||+|+....-.. -+. -....+++. ++++|||||+++
T Consensus 145 l~~~~~~~FD~V~~~~~l~~--l~~--~~~~~~l~~-~~~~LkpGG~l~ 188 (252)
T 2gb4_A 145 LPRANIGKFDRIWDRGALVA--INP--GDHDRYADI-ILSLLRKEFQYL 188 (252)
T ss_dssp GGGGCCCCEEEEEESSSTTT--SCG--GGHHHHHHH-HHHTEEEEEEEE
T ss_pred CCcccCCCEEEEEEhhhhhh--CCH--HHHHHHHHH-HHHHcCCCeEEE
Confidence 64332378999997643211 111 123468888 799999999985
No 109
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.28 E-value=8.1e-12 Score=109.94 Aligned_cols=112 Identities=17% Similarity=0.228 Sum_probs=81.4
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCC-----------------------------
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEA----------------------------- 152 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~----------------------------- 152 (257)
++++|||||||+|.++..+++..+..+|++||+|+.+++.|++++......
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 578999999999999999998755579999999999999999986422100
Q ss_pred -------------------------CCCCCeEEEEcchHHH----HhcCCCceeEEEEcCCCCCCCCcccCC-----chH
Q 025141 153 -------------------------FSDPRLELVINDARAE----LESRKESYDVIIGDLADPIEGGPCYKL-----YTK 198 (257)
Q Consensus 153 -------------------------~~~~rv~i~~~Da~~~----l~~~~~~fDvIi~D~~~~~~~~p~~~L-----~t~ 198 (257)
--..+++++.+|.... +....++||+|++.....+ .+| ...
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~-----ihl~~~~~~~~ 200 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKW-----VHLNWGDEGLK 200 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHH-----HHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHH-----hhhcCCHHHHH
Confidence 0014899999997632 2224578999998753211 011 235
Q ss_pred HHHHHHHcCcCCCCcEEEEec
Q 025141 199 SFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 199 ef~~~~~~~~L~pgGil~~~~ 219 (257)
.+++. ++++|+|||++++..
T Consensus 201 ~~l~~-~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 201 RMFRR-IYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHH-HHHHEEEEEEEEEEC
T ss_pred HHHHH-HHHHhCCCcEEEEec
Confidence 78898 799999999999863
No 110
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.27 E-value=3.8e-12 Score=108.95 Aligned_cols=99 Identities=18% Similarity=0.130 Sum_probs=77.9
Q ss_pred CCCeEEEEeccchHHHHHHHhc----CCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH--HhcCC-C
Q 025141 102 NPKTIFIMGGGEGSTAREILRH----KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE--LESRK-E 174 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~----~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~--l~~~~-~ 174 (257)
++++||+||||+|..+..+++. .+..+|++||+++.+++.|+. . .++++++.+|+.+. +.... .
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~---~------~~~v~~~~gD~~~~~~l~~~~~~ 151 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS---D------MENITLHQGDCSDLTTFEHLREM 151 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG---G------CTTEEEEECCSSCSGGGGGGSSS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc---c------CCceEEEECcchhHHHHHhhccC
Confidence 4679999999999999998885 345799999999999988872 1 36899999999875 43323 3
Q ss_pred ceeEEEEcCCCCCCCCcccCCchHHHHHHHHcC-cCCCCcEEEEec
Q 025141 175 SYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKP-RLNPEGIFVTQA 219 (257)
Q Consensus 175 ~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~-~L~pgGil~~~~ 219 (257)
+||+|++|.... ....+++. +.+ .|+|||++++..
T Consensus 152 ~fD~I~~d~~~~---------~~~~~l~~-~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 152 AHPLIFIDNAHA---------NTFNIMKW-AVDHLLEEGDYFIIED 187 (236)
T ss_dssp CSSEEEEESSCS---------SHHHHHHH-HHHHTCCTTCEEEECS
T ss_pred CCCEEEECCchH---------hHHHHHHH-HHHhhCCCCCEEEEEe
Confidence 799999987521 13567888 686 999999999853
No 111
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.27 E-value=4e-11 Score=102.01 Aligned_cols=105 Identities=18% Similarity=0.197 Sum_probs=82.2
Q ss_pred CCCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025141 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (257)
Q Consensus 100 ~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvI 179 (257)
..++.+||+||||+|..+..+++.. .+|+++|+++.+++.+++.+...+ .++++++.+|+.+. ...+++||+|
T Consensus 19 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~-~~~~~~fD~v 91 (239)
T 1xxl_A 19 CRAEHRVLDIGAGAGHTALAFSPYV--QECIGVDATKEMVEVASSFAQEKG----VENVRFQQGTAESL-PFPDDSFDII 91 (239)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHHT----CCSEEEEECBTTBC-CSCTTCEEEE
T ss_pred cCCCCEEEEEccCcCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHcC----CCCeEEEecccccC-CCCCCcEEEE
Confidence 3567899999999999999998864 499999999999999999876442 35899999998653 3345789999
Q ss_pred EEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
++...-... + -...+++. ++++|+|||.+++.
T Consensus 92 ~~~~~l~~~--~----~~~~~l~~-~~~~LkpgG~l~~~ 123 (239)
T 1xxl_A 92 TCRYAAHHF--S----DVRKAVRE-VARVLKQDGRFLLV 123 (239)
T ss_dssp EEESCGGGC--S----CHHHHHHH-HHHHEEEEEEEEEE
T ss_pred EECCchhhc--c----CHHHHHHH-HHHHcCCCcEEEEE
Confidence 988542111 1 12578888 79999999998875
No 112
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.27 E-value=3.8e-11 Score=112.47 Aligned_cols=138 Identities=12% Similarity=0.048 Sum_probs=98.1
Q ss_pred CCCCeEEEEeccchHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvI 179 (257)
.++.+|||+|||+|+.+..+++.. +..+|+++|+++..++.+++++...+ -. ++++.+|+.++.....++||+|
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G----~~-v~~~~~Da~~l~~~~~~~FD~I 174 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWG----AP-LAVTQAPPRALAEAFGTYFHRV 174 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHC----CC-CEEECSCHHHHHHHHCSCEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----Ce-EEEEECCHHHhhhhccccCCEE
Confidence 456899999999999999998753 33699999999999999999987553 23 8999999998765446789999
Q ss_pred EEcCCCCCC----CCcccC-C-----------chHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCC
Q 025141 180 IGDLADPIE----GGPCYK-L-----------YTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFK 243 (257)
Q Consensus 180 i~D~~~~~~----~~p~~~-L-----------~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~F~ 243 (257)
++|++-... ..|... . ...++++. +.+.|+|||+++..+.+. . ++..+..++.+.+.+|
T Consensus 175 l~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~-a~~~LkpGG~LvysTCs~---~-~eEne~vv~~~l~~~~ 249 (464)
T 3m6w_A 175 LLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQ-ASRLLGPGGVLVYSTCTF---A-PEENEGVVAHFLKAHP 249 (464)
T ss_dssp EEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHH-HHTTEEEEEEEEEEESCC---C-GGGTHHHHHHHHHHCT
T ss_pred EECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHH-HHHhcCCCcEEEEEeccC---c-hhcCHHHHHHHHHHCC
Confidence 999873110 012100 0 12678888 799999999998765433 2 2333455555555566
Q ss_pred ceEEE
Q 025141 244 CGCCA 248 (257)
Q Consensus 244 ~v~~~ 248 (257)
.....
T Consensus 250 ~~~l~ 254 (464)
T 3m6w_A 250 EFRLE 254 (464)
T ss_dssp TEEEE
T ss_pred CcEEE
Confidence 54443
No 113
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.27 E-value=1.9e-11 Score=100.16 Aligned_cols=104 Identities=13% Similarity=0.110 Sum_probs=81.3
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++.+||+||||+|..+..+++. + .+++++|+++.+++.+++.+...+ .++++++.+|+.+.-. .++||+|+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~-~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~~d~~~~~~--~~~~D~v~ 102 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAAN-G-YDVDAWDKNAMSIANVERIKSIEN----LDNLHTRVVDLNNLTF--DRQYDFIL 102 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHHT----CTTEEEEECCGGGCCC--CCCEEEEE
T ss_pred cCCCeEEEEcCCCCHHHHHHHHC-C-CeEEEEECCHHHHHHHHHHHHhCC----CCCcEEEEcchhhCCC--CCCceEEE
Confidence 45679999999999999999986 3 599999999999999999876442 2579999999877532 67899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEE
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~ 217 (257)
+...-... .+ -....+++. +++.|+|||.+++
T Consensus 103 ~~~~l~~~-~~---~~~~~~l~~-~~~~L~~gG~l~~ 134 (199)
T 2xvm_A 103 STVVLMFL-EA---KTIPGLIAN-MQRCTKPGGYNLI 134 (199)
T ss_dssp EESCGGGS-CG---GGHHHHHHH-HHHTEEEEEEEEE
T ss_pred EcchhhhC-CH---HHHHHHHHH-HHHhcCCCeEEEE
Confidence 87642210 11 123578888 7999999998765
No 114
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.26 E-value=1.2e-11 Score=104.44 Aligned_cols=100 Identities=13% Similarity=0.162 Sum_probs=79.9
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++.+|||||||+|..+..+++.. .+|+++|+++.+++.|++.+. . +++++.+|+.+. ..+++||+|+
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~-------~-~v~~~~~d~~~~--~~~~~fD~v~ 108 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHF--NDITCVEASEEAISHAQGRLK-------D-GITYIHSRFEDA--QLPRRYDNIV 108 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTC--SCEEEEESCHHHHHHHHHHSC-------S-CEEEEESCGGGC--CCSSCEEEEE
T ss_pred cCCCcEEEECCCCCHHHHHHHHhC--CcEEEEeCCHHHHHHHHHhhh-------C-CeEEEEccHHHc--CcCCcccEEE
Confidence 456789999999999999998863 389999999999999998753 1 799999999876 3457899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHc-CcCCCCcEEEEec
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVK-PRLNPEGIFVTQA 219 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~-~~L~pgGil~~~~ 219 (257)
+...-.. .+ -...++++ ++ ++|+|||.+++..
T Consensus 109 ~~~~l~~--~~----~~~~~l~~-~~~~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 109 LTHVLEH--ID----DPVALLKR-INDDWLAEGGRLFLVC 141 (250)
T ss_dssp EESCGGG--CS----SHHHHHHH-HHHTTEEEEEEEEEEE
T ss_pred EhhHHHh--hc----CHHHHHHH-HHHHhcCCCCEEEEEc
Confidence 8754211 11 12578899 79 9999999998865
No 115
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.26 E-value=8.4e-12 Score=106.67 Aligned_cols=101 Identities=14% Similarity=0.157 Sum_probs=81.2
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++.+||+||||+|..+..+++..+..+++++|+++.+++.+++. .++++++.+|+.+.. ..++||+|+
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~---------~~~~~~~~~d~~~~~--~~~~fD~v~ 100 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR---------LPNTNFGKADLATWK--PAQKADLLY 100 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH---------STTSEEEECCTTTCC--CSSCEEEEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh---------CCCcEEEECChhhcC--ccCCcCEEE
Confidence 456899999999999999998864346899999999999999986 257899999987754 457899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+...-.+. + -...+++. +++.|+|||.+++..
T Consensus 101 ~~~~l~~~--~----~~~~~l~~-~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 101 ANAVFQWV--P----DHLAVLSQ-LMDQLESGGVLAVQM 132 (259)
T ss_dssp EESCGGGS--T----THHHHHHH-HGGGEEEEEEEEEEE
T ss_pred EeCchhhC--C----CHHHHHHH-HHHhcCCCeEEEEEe
Confidence 97643221 1 13578898 799999999999875
No 116
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.26 E-value=1.1e-11 Score=108.43 Aligned_cols=105 Identities=14% Similarity=0.089 Sum_probs=83.7
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKT-VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvI 179 (257)
.++.+||+||||+|..+..+++..+ ..+|+++|+++.+++.|++.+... .++++++.+|+.++.. .++||+|
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-----~~~v~~~~~d~~~~~~--~~~fD~v 93 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLL-----PYDSEFLEGDATEIEL--NDKYDIA 93 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSS-----SSEEEEEESCTTTCCC--SSCEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhc-----CCceEEEEcchhhcCc--CCCeeEE
Confidence 4678999999999999999998643 479999999999999999987643 2489999999987432 4689999
Q ss_pred EEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
++...-.. .+ -...+++. +++.|+|||.+++..
T Consensus 94 ~~~~~l~~--~~----~~~~~l~~-~~~~LkpgG~l~~~~ 126 (284)
T 3gu3_A 94 ICHAFLLH--MT----TPETMLQK-MIHSVKKGGKIICFE 126 (284)
T ss_dssp EEESCGGG--CS----SHHHHHHH-HHHTEEEEEEEEEEE
T ss_pred EECChhhc--CC----CHHHHHHH-HHHHcCCCCEEEEEe
Confidence 99865222 11 12578898 799999999998754
No 117
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.26 E-value=4.9e-12 Score=105.53 Aligned_cols=107 Identities=11% Similarity=0.041 Sum_probs=76.8
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccC--------CCCCCCeEEEEcchHHHHhcC
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKE--------AFSDPRLELVINDARAELESR 172 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~--------~~~~~rv~i~~~Da~~~l~~~ 172 (257)
+++.+|||+|||+|..+..+++. + .+|++||+++.+++.|++....... .+..++++++.+|+.+.-...
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~-g-~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~ 98 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQ-G-YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD 98 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHH-C-CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred CCCCEEEEeCCCCcHhHHHHHHC-C-CeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc
Confidence 56789999999999999999986 3 4899999999999999987542100 001368999999987643211
Q ss_pred CCceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcE
Q 025141 173 KESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGI 214 (257)
Q Consensus 173 ~~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGi 214 (257)
.++||+|+....-.. -+. -....++++ ++++|||||.
T Consensus 99 ~~~fD~v~~~~~l~~--l~~--~~~~~~l~~-~~r~LkpgG~ 135 (203)
T 1pjz_A 99 IGHCAAFYDRAAMIA--LPA--DMRERYVQH-LEALMPQACS 135 (203)
T ss_dssp HHSEEEEEEESCGGG--SCH--HHHHHHHHH-HHHHSCSEEE
T ss_pred CCCEEEEEECcchhh--CCH--HHHHHHHHH-HHHHcCCCcE
Confidence 157999997543111 110 112357888 7999999997
No 118
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.26 E-value=1.6e-11 Score=101.84 Aligned_cols=141 Identities=11% Similarity=0.025 Sum_probs=97.0
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
+.+.+|||||||+|.++..+....+..+++++|+|+.+++++++++...+ ...++++ .|.... ..+++||+|+
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g---~~~~v~~--~d~~~~--~~~~~~DvVL 120 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLK---TTIKYRF--LNKESD--VYKGTYDVVF 120 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSC---CSSEEEE--ECCHHH--HTTSEEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcC---CCccEEE--eccccc--CCCCCcChhh
Confidence 56889999999999999999886555699999999999999999987653 1124554 666554 3468899999
Q ss_pred EcCCCCCCCCcccCCchH--HHHHHHHcCcCCCCcEEEEec----CCCCCCCChHHHHHHHHHHhhhCCceEEEeecCcc
Q 025141 181 GDLADPIEGGPCYKLYTK--SFYEFVVKPRLNPEGIFVTQA----GPAGIFSHTEVFSCIYNTLRQVFKCGCCALFSSYS 254 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~--ef~~~~~~~~L~pgGil~~~~----~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~~~~ 254 (257)
.-..-| +... ..... +.+.|+|||+++..- +.+...........+.+.+.+-+..+.-+.+++..
T Consensus 121 a~k~LH--------lL~~~~~al~~-v~~~L~pggvfISfptksl~Gr~~gm~~~Y~~~~~~~~~~~~~~~~~~~~~nEl 191 (200)
T 3fzg_A 121 LLKMLP--------VLKQQDVNILD-FLQLFHTQNFVISFPIKSLSGKEKGMEENYQLWFESFTKGWIKILDSKVIGNEL 191 (200)
T ss_dssp EETCHH--------HHHHTTCCHHH-HHHTCEEEEEEEEEECCCCC--CTTCCCCHHHHHHHHTTTTSCEEEEEEETTEE
T ss_pred HhhHHH--------hhhhhHHHHHH-HHHHhCCCCEEEEeChHHhcCCCcchhhhHHHHHHHhccCcceeeeeeeeCceE
Confidence 865421 1111 11225 588999999998532 11111122233445555667778888888888888
Q ss_pred ccC
Q 025141 255 FFC 257 (257)
Q Consensus 255 ~~~ 257 (257)
||+
T Consensus 192 ~y~ 194 (200)
T 3fzg_A 192 VYI 194 (200)
T ss_dssp EEE
T ss_pred EEE
Confidence 874
No 119
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.26 E-value=5.5e-11 Score=103.15 Aligned_cols=127 Identities=17% Similarity=0.195 Sum_probs=94.4
Q ss_pred CCCCeEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhhhhc-cCCCCCCCeEEEEcchHHHHhcCCCceeE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVN-KEAFSDPRLELVINDARAELESRKESYDV 178 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~-~~~~~~~rv~i~~~Da~~~l~~~~~~fDv 178 (257)
.++.+||++|||+|.++..+++. .+..+|+++|+++.+++.|++++... +. ..++++++.+|+.+.. ...+.||+
T Consensus 98 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~--~~~~v~~~~~d~~~~~-~~~~~~D~ 174 (280)
T 1i9g_A 98 FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQ--PPDNWRLVVSDLADSE-LPDGSVDR 174 (280)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTS--CCTTEEEECSCGGGCC-CCTTCEEE
T ss_pred CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC--CCCcEEEEECchHhcC-CCCCceeE
Confidence 45679999999999999999884 33469999999999999999987643 10 1368999999987752 22467999
Q ss_pred EEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhh--hCCceEEE
Q 025141 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQ--VFKCGCCA 248 (257)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~--~F~~v~~~ 248 (257)
|+++.++++ ++++. +.+.|+|||.+++... ....+.++...+++ -|.....+
T Consensus 175 v~~~~~~~~-----------~~l~~-~~~~L~pgG~l~~~~~------~~~~~~~~~~~l~~~~~f~~~~~~ 228 (280)
T 1i9g_A 175 AVLDMLAPW-----------EVLDA-VSRLLVAGGVLMVYVA------TVTQLSRIVEALRAKQCWTEPRAW 228 (280)
T ss_dssp EEEESSCGG-----------GGHHH-HHHHEEEEEEEEEEES------SHHHHHHHHHHHHHHSSBCCCEEE
T ss_pred EEECCcCHH-----------HHHHH-HHHhCCCCCEEEEEeC------CHHHHHHHHHHHHhcCCcCCcEEE
Confidence 999875432 45677 6889999999998752 23455677777775 35555444
No 120
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.25 E-value=3.9e-11 Score=101.89 Aligned_cols=100 Identities=15% Similarity=0.189 Sum_probs=79.0
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-CCCceeEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYDVI 179 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~-~~~~fDvI 179 (257)
+++++||+||||+|..+..+++. + .+|+++|+++.+++.+++. ++++.+|+.+++.. ..++||+|
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~-~-~~v~gvD~s~~~~~~a~~~------------~~~~~~d~~~~~~~~~~~~fD~i 105 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEE-G-IESIGVDINEDMIKFCEGK------------FNVVKSDAIEYLKSLPDKYLDGV 105 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHH-T-CCEEEECSCHHHHHHHHTT------------SEEECSCHHHHHHTSCTTCBSEE
T ss_pred cCCCeEEEEeCCCCHHHHHHHhC-C-CcEEEEECCHHHHHHHHhh------------cceeeccHHHHhhhcCCCCeeEE
Confidence 45689999999999999999886 3 4799999999999999864 68889999998744 45789999
Q ss_pred EEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
++...-.. -+ .-.-..+++. +++.|||||.+++..
T Consensus 106 ~~~~~l~~--~~--~~~~~~~l~~-~~~~LkpgG~l~~~~ 140 (240)
T 3dli_A 106 MISHFVEH--LD--PERLFELLSL-CYSKMKYSSYIVIES 140 (240)
T ss_dssp EEESCGGG--SC--GGGHHHHHHH-HHHHBCTTCCEEEEE
T ss_pred EECCchhh--CC--cHHHHHHHHH-HHHHcCCCcEEEEEe
Confidence 98654211 11 0112578998 799999999998865
No 121
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=99.25 E-value=1.5e-11 Score=106.86 Aligned_cols=114 Identities=13% Similarity=0.174 Sum_probs=83.0
Q ss_pred CCCeEEEEeccchHHHHHHHh--------cCC----CcEEEEEECCH---H-----------HHHHHHhhhhh-cc----
Q 025141 102 NPKTIFIMGGGEGSTAREILR--------HKT----VEKVVMCDIDE---E-----------VVEFCKSYLVV-NK---- 150 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~--------~~~----~~~v~~VEid~---~-----------vi~~a~~~~~~-~~---- 150 (257)
++.+||+||+|+|..+..+++ .+. ..+++++|.+| + +.+.|++.+.. +.
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 457999999999998876554 232 24899999987 3 33355555431 00
Q ss_pred ---CCCCC--CCeEEEEcchHHHHhcCCC----ceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 151 ---EAFSD--PRLELVINDARAELESRKE----SYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 151 ---~~~~~--~rv~i~~~Da~~~l~~~~~----~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
..+.+ .+++++.+|+++.+..... +||+|++|++.|.. .| .+++.++++. ++++|+|||++++.+
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~-~p--~lw~~~~l~~-l~~~L~pGG~l~tys 213 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAK-NP--DMWTQNLFNA-MARLARPGGTLATFT 213 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTT-CG--GGCCHHHHHH-HHHHEEEEEEEEESC
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCccc-Ch--hhcCHHHHHH-HHHHcCCCcEEEEEe
Confidence 00122 4678999999999877543 79999999987642 33 7899999999 899999999999753
No 122
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.25 E-value=4.5e-11 Score=101.86 Aligned_cols=106 Identities=11% Similarity=0.129 Sum_probs=85.1
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
++..+|||||||+|.++..+++..+..+|+++|+|+..++.|+++...++ -..+++++.+|+.+.+.. .++||+|+
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~g---l~~~i~~~~~d~l~~l~~-~~~~D~Iv 89 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHG---LKEKIQVRLANGLAAFEE-TDQVSVIT 89 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTT---CTTTEEEEECSGGGGCCG-GGCCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC---CCceEEEEECchhhhccc-CcCCCEEE
Confidence 45679999999999999999997656799999999999999999987664 245899999999876643 13699988
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+.-. + ..+ -.+++.. ..+.|+++|.++++.
T Consensus 90 iaG~-----G--g~~-i~~Il~~-~~~~L~~~~~lVlq~ 119 (225)
T 3kr9_A 90 IAGM-----G--GRL-IARILEE-GLGKLANVERLILQP 119 (225)
T ss_dssp EEEE-----C--HHH-HHHHHHH-TGGGCTTCCEEEEEE
T ss_pred EcCC-----C--hHH-HHHHHHH-HHHHhCCCCEEEEEC
Confidence 7421 1 112 4678888 799999999999974
No 123
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.25 E-value=1.7e-11 Score=111.94 Aligned_cols=118 Identities=13% Similarity=0.135 Sum_probs=86.2
Q ss_pred hHHHHHHHHHhhcCCCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchH
Q 025141 87 IYHESLVHPALLHHPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDAR 166 (257)
Q Consensus 87 ~y~e~l~~~~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~ 166 (257)
.|.+++....-. -+.+.|||||||+|.++..+++. +..+|++||.++ +++.|++....++ ...+++++.+|..
T Consensus 70 aY~~Ai~~~~~~--~~~k~VLDvG~GtGiLs~~Aa~a-GA~~V~ave~s~-~~~~a~~~~~~n~---~~~~i~~i~~~~~ 142 (376)
T 4hc4_A 70 AYRLGILRNWAA--LRGKTVLDVGAGTGILSIFCAQA-GARRVYAVEASA-IWQQAREVVRFNG---LEDRVHVLPGPVE 142 (376)
T ss_dssp HHHHHHHTTHHH--HTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-THHHHHHHHHHTT---CTTTEEEEESCTT
T ss_pred HHHHHHHhCHHh--cCCCEEEEeCCCccHHHHHHHHh-CCCEEEEEeChH-HHHHHHHHHHHcC---CCceEEEEeeeee
Confidence 355555432221 25689999999999999888885 568999999997 7899999887664 3579999999987
Q ss_pred HHHhcCCCceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEE
Q 025141 167 AELESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (257)
Q Consensus 167 ~~l~~~~~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~ 217 (257)
+. ..++++|+|++...... ....-.-..++.. ..+.|+|||+++.
T Consensus 143 ~~--~lpe~~DvivsE~~~~~---l~~e~~l~~~l~a-~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 143 TV--ELPEQVDAIVSEWMGYG---LLHESMLSSVLHA-RTKWLKEGGLLLP 187 (376)
T ss_dssp TC--CCSSCEEEEECCCCBTT---BTTTCSHHHHHHH-HHHHEEEEEEEES
T ss_pred ee--cCCccccEEEeeccccc---ccccchhhhHHHH-HHhhCCCCceECC
Confidence 75 34588999999876422 1112223566666 5789999999874
No 124
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.25 E-value=1.6e-11 Score=104.99 Aligned_cols=103 Identities=20% Similarity=0.216 Sum_probs=82.1
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++++||+||||+|..+..+++.. ..+|+++|+++.+++.|++.+. .++++++.+|+.+. ....++||+|+
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~~-~~~~~~fD~v~ 113 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHG-AKKVLGIDLSERMLTEAKRKTT-------SPVVCYEQKAIEDI-AIEPDAYNVVL 113 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHCC-------CTTEEEEECCGGGC-CCCTTCEEEEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHhhc-------cCCeEEEEcchhhC-CCCCCCeEEEE
Confidence 367899999999999999999864 3499999999999999998764 36899999998653 33457899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+...-... + ....+++. ++++|+|||++++..
T Consensus 114 ~~~~l~~~--~----~~~~~l~~-~~~~LkpgG~l~~~~ 145 (253)
T 3g5l_A 114 SSLALHYI--A----SFDDICKK-VYINLKSSGSFIFSV 145 (253)
T ss_dssp EESCGGGC--S----CHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred Echhhhhh--h----hHHHHHHH-HHHHcCCCcEEEEEe
Confidence 97542211 1 13578898 799999999999863
No 125
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.25 E-value=3e-11 Score=105.20 Aligned_cols=106 Identities=14% Similarity=0.150 Sum_probs=81.3
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++.+||+||||+|..+..+++..+ .+|+++|+++.+++.+++.+...+ ..++++++.+|+.++ +++||+|+
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvd~s~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~----~~~fD~v~ 134 (287)
T 1kpg_A 63 QPGMTLLDVGCGWGATMMRAVEKYD-VNVVGLTLSKNQANHVQQLVANSE---NLRSKRVLLAGWEQF----DEPVDRIV 134 (287)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHTCC---CCSCEEEEESCGGGC----CCCCSEEE
T ss_pred CCcCEEEEECCcccHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhcC---CCCCeEEEECChhhC----CCCeeEEE
Confidence 4567999999999999999985444 499999999999999999876432 246899999998653 27899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+...-... .+ -....+++. +++.|||||.+++..
T Consensus 135 ~~~~l~~~-~~---~~~~~~l~~-~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 135 SIGAFEHF-GH---ERYDAFFSL-AHRLLPADGVMLLHT 168 (287)
T ss_dssp EESCGGGT-CT---TTHHHHHHH-HHHHSCTTCEEEEEE
T ss_pred EeCchhhc-Ch---HHHHHHHHH-HHHhcCCCCEEEEEE
Confidence 87431110 10 123578898 799999999998864
No 126
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.25 E-value=3.2e-11 Score=110.10 Aligned_cols=112 Identities=13% Similarity=0.163 Sum_probs=85.0
Q ss_pred CCCCeEEEEeccchHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhhhhcc----CCCCCCCeEEEEcchHHHH-----h
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNK----EAFSDPRLELVINDARAEL-----E 170 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~----~~~~~~rv~i~~~Da~~~l-----~ 170 (257)
.++.+|||||||+|..+..+++.. +..+|+++|+++.+++.|++++.... +.+..++++++.+|+.+.. .
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 356899999999999999998862 34699999999999999999875321 1123479999999987753 2
Q ss_pred cCCCceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 171 SRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 171 ~~~~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
...++||+|++...-.. .+ -...+++. ++++|||||++++..
T Consensus 162 ~~~~~fD~V~~~~~l~~--~~----d~~~~l~~-~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNL--ST----NKLALFKE-IHRVLRDGGELYFSD 203 (383)
T ss_dssp CCTTCEEEEEEESCGGG--CS----CHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred CCCCCEEEEEEccchhc--CC----CHHHHHHH-HHHHcCCCCEEEEEE
Confidence 23478999999865322 11 13578898 799999999998753
No 127
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.24 E-value=2.5e-11 Score=109.66 Aligned_cols=113 Identities=17% Similarity=0.108 Sum_probs=85.6
Q ss_pred CCCCeEEEEeccchHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvI 179 (257)
.+..+|||+|||+|.++.+++... +..+|+++|+|+.+++.|++++...+ . ++++++.+|+.++.. ..+.||+|
T Consensus 202 ~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g---~-~~i~~~~~D~~~~~~-~~~~~D~I 276 (354)
T 3tma_A 202 RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASG---L-SWIRFLRADARHLPR-FFPEVDRI 276 (354)
T ss_dssp CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTT---C-TTCEEEECCGGGGGG-TCCCCSEE
T ss_pred CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcC---C-CceEEEeCChhhCcc-ccCCCCEE
Confidence 456799999999999999999853 44689999999999999999987553 1 289999999988643 33569999
Q ss_pred EEcCCCCCCCCcccCC--chHHHHHHHHcCcCCCCcEEEEec
Q 025141 180 IGDLADPIEGGPCYKL--YTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L--~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
++|++-.........+ .-.++++. +++.|+|||.+++-+
T Consensus 277 i~npPyg~r~~~~~~~~~~~~~~~~~-~~~~LkpgG~l~i~t 317 (354)
T 3tma_A 277 LANPPHGLRLGRKEGLFHLYWDFLRG-ALALLPPGGRVALLT 317 (354)
T ss_dssp EECCCSCC----CHHHHHHHHHHHHH-HHHTSCTTCEEEEEE
T ss_pred EECCCCcCccCCcccHHHHHHHHHHH-HHHhcCCCcEEEEEe
Confidence 9998743321111111 12578888 799999999998864
No 128
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.24 E-value=1.5e-11 Score=98.70 Aligned_cols=132 Identities=15% Similarity=0.015 Sum_probs=91.8
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++.+||+||||+|..+..+++.. .+++++|+++.+++.+++. .++++++.+| +....++||+|+
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~---------~~~v~~~~~d----~~~~~~~~D~v~ 80 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFA--TKLYCIDINVIALKEVKEK---------FDSVITLSDP----KEIPDNSVDFIL 80 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTE--EEEEEECSCHHHHHHHHHH---------CTTSEEESSG----GGSCTTCEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhhc--CeEEEEeCCHHHHHHHHHh---------CCCcEEEeCC----CCCCCCceEEEE
Confidence 456799999999999999999864 4999999999999999987 2588999999 334457899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCC-C-CC----ChHHHHHHHHHHhhhCCceEEEeecCcc
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAG-I-FS----HTEVFSCIYNTLRQVFKCGCCALFSSYS 254 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~-~-~~----~~~~~~~~~~~l~~~F~~v~~~~~~~~~ 254 (257)
+...-.. .+ -...+++. +++.|+|||.+++..-.+. . .. ..-...++.+.++ -|..+.....+.+.
T Consensus 81 ~~~~l~~--~~----~~~~~l~~-~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-Gf~~~~~~~~~~~~ 152 (170)
T 3i9f_A 81 FANSFHD--MD----DKQHVISE-VKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS-NFVVEKRFNPTPYH 152 (170)
T ss_dssp EESCSTT--CS----CHHHHHHH-HHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT-TEEEEEEECSSTTE
T ss_pred Eccchhc--cc----CHHHHHHH-HHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh-CcEEEEccCCCCce
Confidence 8765322 11 13578888 7999999999887531110 0 00 0001234445555 66666666555544
Q ss_pred c
Q 025141 255 F 255 (257)
Q Consensus 255 ~ 255 (257)
|
T Consensus 153 ~ 153 (170)
T 3i9f_A 153 F 153 (170)
T ss_dssp E
T ss_pred E
Confidence 4
No 129
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.24 E-value=1.5e-11 Score=112.84 Aligned_cols=104 Identities=23% Similarity=0.199 Sum_probs=86.5
Q ss_pred CCCeEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCC-eEEEEcchHHHHh-cCCCceeE
Q 025141 102 NPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPR-LELVINDARAELE-SRKESYDV 178 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~r-v~i~~~Da~~~l~-~~~~~fDv 178 (257)
+.++|||+++|+|..+.++++. .+..+|++||+|+..++.+++++..++ -+.+ ++++.+|++++++ ...++||+
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ng---l~~~~v~v~~~Da~~~l~~~~~~~fD~ 128 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNN---IPEDRYEIHGMEANFFLRKEWGFGFDY 128 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTT---CCGGGEEEECSCHHHHHHSCCSSCEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhC---CCCceEEEEeCCHHHHHHHhhCCCCcE
Confidence 4579999999999999998885 345799999999999999999998774 2345 9999999999998 66678999
Q ss_pred EEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
|++|++. .+ .++++. +.+.|+|||++++.+
T Consensus 129 V~lDP~g----~~------~~~l~~-a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 129 VDLDPFG----TP------VPFIES-VALSMKRGGILSLTA 158 (392)
T ss_dssp EEECCSS----CC------HHHHHH-HHHHEEEEEEEEEEE
T ss_pred EEECCCc----CH------HHHHHH-HHHHhCCCCEEEEEe
Confidence 9999842 11 467887 688899999888754
No 130
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.24 E-value=4.9e-11 Score=99.36 Aligned_cols=100 Identities=21% Similarity=0.247 Sum_probs=79.3
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc---CCCcee
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES---RKESYD 177 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~---~~~~fD 177 (257)
..+.+||+||||+|..+..+++. + .+|+++|+++.+++.+++. ++++++..|+.+.... ...+||
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~-~-~~v~~vD~s~~~~~~a~~~----------~~~~~~~~~~~~~~~~~~~~~~~fD 118 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADR-G-IEAVGVDGDRTLVDAARAA----------GAGEVHLASYAQLAEAKVPVGKDYD 118 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTT-T-CEEEEEESCHHHHHHHHHT----------CSSCEEECCHHHHHTTCSCCCCCEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHC-C-CEEEEEcCCHHHHHHHHHh----------cccccchhhHHhhcccccccCCCcc
Confidence 45689999999999999999986 3 5899999999999999985 3567888998887332 235699
Q ss_pred EEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecC
Q 025141 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (257)
Q Consensus 178 vIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~ 220 (257)
+|++...-.. .. ...+++. +++.|+|||++++...
T Consensus 119 ~v~~~~~l~~-~~------~~~~l~~-~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 119 LICANFALLH-QD------IIELLSA-MRTLLVPGGALVIQTL 153 (227)
T ss_dssp EEEEESCCCS-SC------CHHHHHH-HHHTEEEEEEEEEEEC
T ss_pred EEEECchhhh-hh------HHHHHHH-HHHHhCCCeEEEEEec
Confidence 9999754321 11 2578898 7999999999998653
No 131
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.24 E-value=2.3e-11 Score=101.07 Aligned_cols=102 Identities=15% Similarity=0.156 Sum_probs=80.1
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
+++.+||+||||+|.++..+++. + .+|+++|+++.+++.+++ . ..++++++.+|+.+. ...++||+|+
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~-~-~~v~~~D~s~~~~~~a~~----~----~~~~~~~~~~d~~~~--~~~~~~D~v~ 112 (218)
T 3ou2_A 45 NIRGDVLELASGTGYWTRHLSGL-A-DRVTALDGSAEMIAEAGR----H----GLDNVEFRQQDLFDW--TPDRQWDAVF 112 (218)
T ss_dssp TSCSEEEEESCTTSHHHHHHHHH-S-SEEEEEESCHHHHHHHGG----G----CCTTEEEEECCTTSC--CCSSCEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHh----c----CCCCeEEEecccccC--CCCCceeEEE
Confidence 45579999999999999999987 3 599999999999999998 1 236899999999876 4468899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+...-.. .+ .-....+++. +++.|+|||.+++..
T Consensus 113 ~~~~l~~--~~--~~~~~~~l~~-~~~~L~pgG~l~~~~ 146 (218)
T 3ou2_A 113 FAHWLAH--VP--DDRFEAFWES-VRSAVAPGGVVEFVD 146 (218)
T ss_dssp EESCGGG--SC--HHHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred Eechhhc--CC--HHHHHHHHHH-HHHHcCCCeEEEEEe
Confidence 8753211 11 0012578898 799999999988764
No 132
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.24 E-value=5.3e-11 Score=101.88 Aligned_cols=138 Identities=18% Similarity=0.148 Sum_probs=88.8
Q ss_pred CCCCeEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHh--cCCCcee
Q 025141 101 PNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELE--SRKESYD 177 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~--~~~~~fD 177 (257)
.+..+|||+|||+|+.+..+++. .+..+|++||+++.+++...+.... .+++.++.+|++.... ...++||
T Consensus 75 ~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~------r~nv~~i~~Da~~~~~~~~~~~~~D 148 (232)
T 3id6_C 75 RKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR------RPNIFPLLADARFPQSYKSVVENVD 148 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH------CTTEEEEECCTTCGGGTTTTCCCEE
T ss_pred CCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh------cCCeEEEEcccccchhhhccccceE
Confidence 34689999999999999988875 3346999999999886543332211 2579999999976422 2246899
Q ss_pred EEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCC---CCCChHHHHHHHHHHhhh-CCceEEEeecCc
Q 025141 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAG---IFSHTEVFSCIYNTLRQV-FKCGCCALFSSY 253 (257)
Q Consensus 178 vIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~---~~~~~~~~~~~~~~l~~~-F~~v~~~~~~~~ 253 (257)
+|++|.+.+. ....+.+. +++.|||||.+++...+++ .....+.+....+.|++. |.-+.....++|
T Consensus 149 ~I~~d~a~~~--------~~~il~~~-~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~~~~~l~p~ 219 (232)
T 3id6_C 149 VLYVDIAQPD--------QTDIAIYN-AKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQIINLDPY 219 (232)
T ss_dssp EEEECCCCTT--------HHHHHHHH-HHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEEEEEEECTTT
T ss_pred EEEecCCChh--------HHHHHHHH-HHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEEEEeccCCC
Confidence 9999976422 11223344 5669999999987542221 011223345566677653 666665555554
No 133
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.23 E-value=5.1e-12 Score=111.59 Aligned_cols=110 Identities=17% Similarity=0.100 Sum_probs=82.7
Q ss_pred CCCCeEEEEeccchHHHHHHH-hcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025141 101 PNPKTIFIMGGGEGSTAREIL-RHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~-~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvI 179 (257)
+++.+|||||||+|..+..++ +..+..+|+++|+++.+++.|++++...+ ...+++++.+|+.+.. . .++||+|
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~-~-~~~fD~v 191 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHA---LAGQITLHRQDAWKLD-T-REGYDLL 191 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTST---TGGGEEEEECCGGGCC-C-CSCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcC---CCCceEEEECchhcCC-c-cCCeEEE
Confidence 567899999999999999985 33345799999999999999999886432 2457999999998753 2 2889999
Q ss_pred EEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
++...-.....+ -....+++. +++.|+|||++++..
T Consensus 192 ~~~~~~~~~~~~---~~~~~~l~~-~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 192 TSNGLNIYEPDD---ARVTELYRR-FWQALKPGGALVTSF 227 (305)
T ss_dssp ECCSSGGGCCCH---HHHHHHHHH-HHHHEEEEEEEEEEC
T ss_pred EECChhhhcCCH---HHHHHHHHH-HHHhcCCCeEEEEEe
Confidence 986532110011 112347898 799999999999865
No 134
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.23 E-value=1.9e-11 Score=103.62 Aligned_cols=104 Identities=19% Similarity=0.152 Sum_probs=79.8
Q ss_pred CCCCeEEEEeccchHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHH--hcCCCcee
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAEL--ESRKESYD 177 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l--~~~~~~fD 177 (257)
.+..+|||+|||+|.++..+++.. +..+|++||+++.+++.+.+..... ++++++.+|+.+.. ....++||
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~------~~v~~~~~d~~~~~~~~~~~~~~D 149 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR------TNIIPVIEDARHPHKYRMLIAMVD 149 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC------TTEEEECSCTTCGGGGGGGCCCEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc------CCeEEEEcccCChhhhcccCCcEE
Confidence 346799999999999999999862 3469999999999877777665432 58999999998742 33457899
Q ss_pred EEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 178 vIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+|++|.+.+. ....+++. +.+.|+|||++++.+
T Consensus 150 ~V~~~~~~~~--------~~~~~~~~-~~~~LkpgG~l~i~~ 182 (233)
T 2ipx_A 150 VIFADVAQPD--------QTRIVALN-AHTFLRNGGHFVISI 182 (233)
T ss_dssp EEEECCCCTT--------HHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EEEEcCCCcc--------HHHHHHHH-HHHHcCCCeEEEEEE
Confidence 9999876321 12456777 689999999998854
No 135
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.23 E-value=1.1e-11 Score=105.47 Aligned_cols=140 Identities=19% Similarity=0.134 Sum_probs=95.7
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~ 181 (257)
++.+||+||||+|..+..+++.. ..+|+++|+++.+++.|++++...+ ..+++++.+|+.+.. ...++||+|++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~~d~~~~~-~~~~~fD~v~~ 152 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEG----KRVRNYFCCGLQDFT-PEPDSYDVIWI 152 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGG----GGEEEEEECCGGGCC-CCSSCEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcC----CceEEEEEcChhhcC-CCCCCEEEEEE
Confidence 47899999999999999988864 4699999999999999999876431 357899999976643 33468999998
Q ss_pred cCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCC--------CCChHHHHHHHHHHhhh-CCceEEEeecC
Q 025141 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGI--------FSHTEVFSCIYNTLRQV-FKCGCCALFSS 252 (257)
Q Consensus 182 D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~--------~~~~~~~~~~~~~l~~~-F~~v~~~~~~~ 252 (257)
+..-.. .+. -....+++. ++++|+|||++++....... ........++.+.|++. |..+.......
T Consensus 153 ~~~l~~--~~~--~~~~~~l~~-~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~ 227 (241)
T 2ex4_A 153 QWVIGH--LTD--QHLAEFLRR-CKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEERQEN 227 (241)
T ss_dssp ESCGGG--SCH--HHHHHHHHH-HHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEEECCS
T ss_pred cchhhh--CCH--HHHHHHHHH-HHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEeeecCC
Confidence 854211 110 012478888 79999999999874311000 00001244566667665 77666654433
No 136
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.23 E-value=2.7e-11 Score=110.54 Aligned_cols=107 Identities=19% Similarity=0.184 Sum_probs=82.7
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++++|||||||+|.++..+++. +..+|++||++ .+++.|++++..++ ..++++++.+|+.++.. +++||+|+
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~-g~~~V~gvD~s-~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~--~~~~D~Iv 134 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQA-GARKVYAVEAT-KMADHARALVKANN---LDHIVEVIEGSVEDISL--PEKVDVII 134 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHT-TCSEEEEEESS-TTHHHHHHHHHHTT---CTTTEEEEESCGGGCCC--SSCEEEEE
T ss_pred CCCCEEEEeccCcCHHHHHHHhc-CCCEEEEEccH-HHHHHHHHHHHHcC---CCCeEEEEECchhhcCc--CCcceEEE
Confidence 45689999999999999999986 45699999999 99999999887553 34689999999977632 27899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
+++..... . ..-.-..+++. +++.|+|||+++..
T Consensus 135 ~~~~~~~l-~--~e~~~~~~l~~-~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 135 SEWMGYFL-L--RESMFDSVISA-RDRWLKPTGVMYPS 168 (376)
T ss_dssp ECCCBTTB-T--TTCTHHHHHHH-HHHHEEEEEEEESS
T ss_pred EcChhhcc-c--chHHHHHHHHH-HHhhCCCCeEEEEe
Confidence 98743221 1 11123467887 68999999999753
No 137
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.23 E-value=1.5e-11 Score=110.70 Aligned_cols=101 Identities=16% Similarity=0.182 Sum_probs=83.2
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.+.++|||+|||+|.++.. ++ +..+|+++|+++.+++.+++++..++ ..++++++.+|+++++ ++||+|+
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n~---l~~~v~~~~~D~~~~~----~~fD~Vi 263 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLNK---LEHKIIPILSDVREVD----VKGNRVI 263 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEESCGGGCC----CCEEEEE
T ss_pred CCCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEECChHHhc----CCCcEEE
Confidence 4678999999999999999 77 35799999999999999999988764 2358999999999886 7899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCC
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPA 222 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~ 222 (257)
+|++.. ..++++. +.+.|+|||++++....+
T Consensus 264 ~dpP~~----------~~~~l~~-~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 264 MNLPKF----------AHKFIDK-ALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp ECCTTT----------GGGGHHH-HHHHEEEEEEEEEEEEES
T ss_pred ECCcHh----------HHHHHHH-HHHHcCCCCEEEEEEeec
Confidence 997521 1267777 688999999988765433
No 138
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.23 E-value=1.8e-11 Score=103.52 Aligned_cols=135 Identities=16% Similarity=0.095 Sum_probs=92.7
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~ 181 (257)
++.+||+||||+|..+..+++. ..+|+++|+++.+++.|++.+.... ...+++++.+|+.++. ..++||+|++
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~--~~~~fD~v~~ 138 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASP--ERFVVGLDISESALAKANETYGSSP---KAEYFSFVKEDVFTWR--PTELFDLIFD 138 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBT--TEEEEEECSCHHHHHHHHHHHTTSG---GGGGEEEECCCTTTCC--CSSCEEEEEE
T ss_pred CCCCEEEeCCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHhhccC---CCcceEEEECchhcCC--CCCCeeEEEE
Confidence 4569999999999999998773 3689999999999999999876321 2358999999988753 3468999998
Q ss_pred cCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCC----ChHHHHHHHHHHhhh-CCceEEE
Q 025141 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFS----HTEVFSCIYNTLRQV-FKCGCCA 248 (257)
Q Consensus 182 D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~----~~~~~~~~~~~l~~~-F~~v~~~ 248 (257)
...-.. .+ .-....+++. +++.|+|||.+++..-+..... ..-...++.+.|++. |..+..-
T Consensus 139 ~~~l~~--~~--~~~~~~~l~~-~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 205 (235)
T 3lcc_A 139 YVFFCA--IE--PEMRPAWAKS-MYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVE 205 (235)
T ss_dssp ESSTTT--SC--GGGHHHHHHH-HHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEE
T ss_pred Chhhhc--CC--HHHHHHHHHH-HHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEE
Confidence 654322 11 1123578898 7999999999987432110000 001234566667665 6555443
No 139
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.23 E-value=2.6e-11 Score=105.69 Aligned_cols=103 Identities=17% Similarity=0.182 Sum_probs=81.9
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~ 181 (257)
++.+|||+|||+|..+..+++. + .+|+++|+++.+++.+++.+...+ .+++++.+|+.+... .++||+|++
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~-g-~~v~~vD~s~~~~~~a~~~~~~~~-----~~~~~~~~d~~~~~~--~~~fD~i~~ 190 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL-G-YDVTSWDHNENSIAFLNETKEKEN-----LNISTALYDINAANI--QENYDFIVS 190 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHTT-----CCEEEEECCGGGCCC--CSCEEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHC-C-CeEEEEECCHHHHHHHHHHHHHcC-----CceEEEEeccccccc--cCCccEEEE
Confidence 6789999999999999999986 3 499999999999999999887542 289999999877533 678999999
Q ss_pred cCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 182 D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
...-... .+ -....+++. +++.|+|||++++.
T Consensus 191 ~~~~~~~-~~---~~~~~~l~~-~~~~LkpgG~l~i~ 222 (286)
T 3m70_A 191 TVVFMFL-NR---ERVPSIIKN-MKEHTNVGGYNLIV 222 (286)
T ss_dssp CSSGGGS-CG---GGHHHHHHH-HHHTEEEEEEEEEE
T ss_pred ccchhhC-CH---HHHHHHHHH-HHHhcCCCcEEEEE
Confidence 8643211 11 123578898 79999999986653
No 140
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.23 E-value=2.6e-11 Score=109.55 Aligned_cols=108 Identities=17% Similarity=0.248 Sum_probs=82.4
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++++|||||||+|.++..+++. +..+|++||+++ +++.|++.+..++ ..++++++.+|+.+. ....++||+|+
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~-~l~~a~~~~~~~~---~~~~v~~~~~d~~~~-~~~~~~fD~Ii 138 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKA-GARKVIGIECSS-ISDYAVKIVKANK---LDHVVTIIKGKVEEV-ELPVEKVDIII 138 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTT---CTTTEEEEESCTTTC-CCSSSCEEEEE
T ss_pred CCCCEEEEEeccchHHHHHHHHC-CCCEEEEECcHH-HHHHHHHHHHHcC---CCCcEEEEECcHHHc-cCCCCceEEEE
Confidence 35689999999999999999997 457999999995 9999999886543 346799999998876 23347899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
++...... ...-....+++. +.+.|+|||+++..
T Consensus 139 s~~~~~~l---~~~~~~~~~l~~-~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 139 SEWMGYCL---FYESMLNTVLHA-RDKWLAPDGLIFPD 172 (349)
T ss_dssp ECCCBBTB---TBTCCHHHHHHH-HHHHEEEEEEEESC
T ss_pred Eccccccc---cCchhHHHHHHH-HHHhCCCCCEEccc
Confidence 98642210 011123567787 68999999998743
No 141
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.23 E-value=9.5e-11 Score=104.45 Aligned_cols=115 Identities=16% Similarity=0.050 Sum_probs=85.4
Q ss_pred CCCCeEEEEeccchHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvI 179 (257)
.+..+|||+|||+|..+..+++.. +..+|+++|+++..++.+++++...+ -++++++.+|+.++.. ..++||+|
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g----~~~v~~~~~D~~~~~~-~~~~fD~I 191 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLG----VLNVILFHSSSLHIGE-LNVEFDKI 191 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHT----CCSEEEESSCGGGGGG-GCCCEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhC----CCeEEEEECChhhccc-ccccCCEE
Confidence 445799999999999999998753 34699999999999999999987542 2479999999988654 34689999
Q ss_pred EEcCCCCCC----CCccc-CCc-----------hHHHHHHHHcCcCCCCcEEEEecCC
Q 025141 180 IGDLADPIE----GGPCY-KLY-----------TKSFYEFVVKPRLNPEGIFVTQAGP 221 (257)
Q Consensus 180 i~D~~~~~~----~~p~~-~L~-----------t~ef~~~~~~~~L~pgGil~~~~~~ 221 (257)
++|++-... ..|.. ..+ ..++++. +.+.|||||++++...+
T Consensus 192 l~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~-~~~~LkpGG~lv~stcs 248 (315)
T 1ixk_A 192 LLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEK-GLEVLKPGGILVYSTCS 248 (315)
T ss_dssp EEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHH-HHHHEEEEEEEEEEESC
T ss_pred EEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHH-HHHhCCCCCEEEEEeCC
Confidence 999862110 01100 001 1578888 79999999999886543
No 142
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.22 E-value=3.9e-11 Score=103.16 Aligned_cols=101 Identities=13% Similarity=0.152 Sum_probs=78.7
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
+++.+||+||||+|..+..+++.. .+|+++|+++.+++.|++.+ ++++++.+|+.++-. .++||+|+
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~---------~~~~~~~~d~~~~~~--~~~fD~v~ 115 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSF--GTVEGLELSADMLAIARRRN---------PDAVLHHGDMRDFSL--GRRFSAVT 115 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTS--SEEEEEESCHHHHHHHHHHC---------TTSEEEECCTTTCCC--SCCEEEEE
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcC--CeEEEEECCHHHHHHHHhhC---------CCCEEEECChHHCCc--cCCcCEEE
Confidence 566899999999999999999863 58999999999999999864 378999999877432 57899999
Q ss_pred EcC-CCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 181 GDL-ADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 181 ~D~-~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
+.. .-.. .+ ..-....+++. +++.|+|||++++.
T Consensus 116 ~~~~~l~~--~~-~~~~~~~~l~~-~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 116 CMFSSIGH--LA-GQAELDAALER-FAAHVLPDGVVVVE 150 (263)
T ss_dssp ECTTGGGG--SC-HHHHHHHHHHH-HHHTEEEEEEEEEC
T ss_pred EcCchhhh--cC-CHHHHHHHHHH-HHHhcCCCcEEEEE
Confidence 874 2111 00 00012467888 79999999999985
No 143
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.22 E-value=2.4e-11 Score=103.24 Aligned_cols=103 Identities=13% Similarity=0.058 Sum_probs=80.0
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~ 181 (257)
++.+|||+|||+|..+..+++. + .+|+++|+++.+++.|++++...+ ..++++++.+|+.++. ..++||+|++
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~-~-~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~~--~~~~~D~v~~ 150 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALT-G-MRVIAIDIDPVKIALARNNAEVYG---IADKIEFICGDFLLLA--SFLKADVVFL 150 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHTT---CGGGEEEEESCHHHHG--GGCCCSEEEE
T ss_pred CCCEEEECccccCHHHHHHHHc-C-CEEEEEECCHHHHHHHHHHHHHcC---CCcCeEEEECChHHhc--ccCCCCEEEE
Confidence 6789999999999999999986 3 699999999999999999987542 2358999999999986 3478999999
Q ss_pred cCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 182 D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
+++-.....+. ..+.. +++.|+|||++++.
T Consensus 151 ~~~~~~~~~~~------~~~~~-~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 151 SPPWGGPDYAT------AETFD-IRTMMSPDGFEIFR 180 (241)
T ss_dssp CCCCSSGGGGG------SSSBC-TTTSCSSCHHHHHH
T ss_pred CCCcCCcchhh------hHHHH-HHhhcCCcceeHHH
Confidence 97643211111 12335 58899999987654
No 144
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.22 E-value=2.2e-11 Score=106.62 Aligned_cols=107 Identities=16% Similarity=0.152 Sum_probs=83.1
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++.+||+||||+|..+..+++..+ .+|+++|+++.+++.|++.+...+ ..++++++.+|+.+. ...+++||+|+
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~---~~~~~~~~~~d~~~~-~~~~~~fD~v~ 155 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFG-VSIDCLNIAPVQNKRNEEYNNQAG---LADNITVKYGSFLEI-PCEDNSYDFIW 155 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHHHT---CTTTEEEEECCTTSC-SSCTTCEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHhcC---CCcceEEEEcCcccC-CCCCCCEeEEE
Confidence 4568999999999999999988643 499999999999999999876432 246899999998763 23357899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+...-.. .+ . ...+++. ++++|+|||.+++..
T Consensus 156 ~~~~l~~--~~--~--~~~~l~~-~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 156 SQDAFLH--SP--D--KLKVFQE-CARVLKPRGVMAITD 187 (297)
T ss_dssp EESCGGG--CS--C--HHHHHHH-HHHHEEEEEEEEEEE
T ss_pred ecchhhh--cC--C--HHHHHHH-HHHHcCCCeEEEEEE
Confidence 8643211 11 1 3678898 799999999988764
No 145
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.22 E-value=2.8e-11 Score=107.11 Aligned_cols=106 Identities=12% Similarity=0.068 Sum_probs=83.5
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++.+|||||||+|..+..+++..+ .+|+++|+++.+++.|++++...+ ..++++++.+|+.+. ....++||+|+
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~-~~~~~~fD~V~ 190 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRFG-SRVEGVTLSAAQADFGNRRARELR---IDDHVRSRVCNMLDT-PFDKGAVTASW 190 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEECCTTSC-CCCTTCEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHcC---CCCceEEEECChhcC-CCCCCCEeEEE
Confidence 4568999999999999999988643 689999999999999999886542 245899999998753 22357899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+...-. ++-...+++. +++.|+|||.+++..
T Consensus 191 ~~~~l~-------~~~~~~~l~~-~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 191 NNESTM-------YVDLHDLFSE-HSRFLKVGGRYVTIT 221 (312)
T ss_dssp EESCGG-------GSCHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred ECCchh-------hCCHHHHHHH-HHHHcCCCcEEEEEE
Confidence 864321 1225688998 799999999988754
No 146
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.22 E-value=2.5e-11 Score=103.88 Aligned_cols=106 Identities=16% Similarity=0.179 Sum_probs=82.2
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++.+||+||||+|..+..+++..+ .+|+++|+++.+++.+++.+... ++++++.+|+.+. ....++||+|+
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~d~~~~-~~~~~~fD~v~ 125 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKYG-AHTHGIDICSNIVNMANERVSGN------NKIIFEANDILTK-EFPENNFDLIY 125 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHTCCSC------TTEEEEECCTTTC-CCCTTCEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhhcC------CCeEEEECccccC-CCCCCcEEEEe
Confidence 4567999999999999999998643 69999999999999999876422 6899999998764 33457899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+...-.. .+ .-....+++. ++++|+|||.+++..
T Consensus 126 ~~~~l~~--~~--~~~~~~~l~~-~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 126 SRDAILA--LS--LENKNKLFQK-CYKWLKPTGTLLITD 159 (266)
T ss_dssp EESCGGG--SC--HHHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred HHHHHHh--cC--hHHHHHHHHH-HHHHcCCCCEEEEEE
Confidence 8753211 10 0123578888 799999999998764
No 147
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.21 E-value=3.8e-11 Score=109.80 Aligned_cols=105 Identities=20% Similarity=0.232 Sum_probs=85.5
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccC-------------CCCCCCeEEEEcchHHH
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKE-------------AFSDPRLELVINDARAE 168 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~-------------~~~~~rv~i~~~Da~~~ 168 (257)
++.+|||+|||+|..+..+++..+..+|+++|+|+..++.+++++..+.. .. .+++++.+|+.++
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl--~~i~v~~~Da~~~ 124 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGE--KTIVINHDDANRL 124 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESS--SEEEEEESCHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCC--CceEEEcCcHHHH
Confidence 67899999999999999998864446899999999999999999886510 11 2399999999999
Q ss_pred HhcCCCceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 169 LESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 169 l~~~~~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+....++||+|++|++. . ..+|+.. +.+.|+|||++++.+
T Consensus 125 ~~~~~~~fD~I~lDP~~----~------~~~~l~~-a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 125 MAERHRYFHFIDLDPFG----S------PMEFLDT-ALRSAKRRGILGVTA 164 (378)
T ss_dssp HHHSTTCEEEEEECCSS----C------CHHHHHH-HHHHEEEEEEEEEEE
T ss_pred HHhccCCCCEEEeCCCC----C------HHHHHHH-HHHhcCCCCEEEEEe
Confidence 87666789999999752 1 1478888 688999999887753
No 148
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.21 E-value=4.9e-11 Score=98.43 Aligned_cols=100 Identities=8% Similarity=0.030 Sum_probs=79.7
Q ss_pred CCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEEEc
Q 025141 103 PKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGD 182 (257)
Q Consensus 103 ~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~D 182 (257)
+.+||+||||+|..+..+++. + .+++++|+++.+++.+++.+ ++++++.+|+.+. ....++||+|++.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~-~-~~v~gvD~s~~~~~~a~~~~---------~~~~~~~~d~~~~-~~~~~~fD~v~~~ 109 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL-G-HQIEGLEPATRLVELARQTH---------PSVTFHHGTITDL-SDSPKRWAGLLAW 109 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT-T-CCEEEECCCHHHHHHHHHHC---------TTSEEECCCGGGG-GGSCCCEEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHhC---------CCCeEEeCccccc-ccCCCCeEEEEeh
Confidence 789999999999999999986 3 48999999999999999862 4789999998774 3445889999997
Q ss_pred CCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 183 LADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 183 ~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
..-.. .+ .-....+++. ++++|+|||.+++..
T Consensus 110 ~~l~~--~~--~~~~~~~l~~-~~~~L~pgG~l~i~~ 141 (203)
T 3h2b_A 110 YSLIH--MG--PGELPDALVA-LRMAVEDGGGLLMSF 141 (203)
T ss_dssp SSSTT--CC--TTTHHHHHHH-HHHTEEEEEEEEEEE
T ss_pred hhHhc--CC--HHHHHHHHHH-HHHHcCCCcEEEEEE
Confidence 54221 11 0123678898 799999999998764
No 149
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.21 E-value=3.6e-11 Score=107.04 Aligned_cols=103 Identities=18% Similarity=0.170 Sum_probs=80.7
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKT-VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvI 179 (257)
.++.+||+||||+|.++..+++..+ ..+|+++|+++++++.|++++...+ .++++++.+|+.+.+. ..++||+|
T Consensus 74 ~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g----~~~v~~~~~d~~~~~~-~~~~fD~I 148 (317)
T 1dl5_A 74 DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLG----IENVIFVCGDGYYGVP-EFSPYDVI 148 (317)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEESCGGGCCG-GGCCEEEE
T ss_pred CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcC----CCCeEEEECChhhccc-cCCCeEEE
Confidence 4568999999999999999988643 3579999999999999999886542 2469999999987543 23689999
Q ss_pred EEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCC
Q 025141 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGP 221 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~ 221 (257)
+++..-+. +. +. +.+.|+|||++++...+
T Consensus 149 v~~~~~~~-------~~-----~~-~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 149 FVTVGVDE-------VP-----ET-WFTQLKEGGRVIVPINL 177 (317)
T ss_dssp EECSBBSC-------CC-----HH-HHHHEEEEEEEEEEBCB
T ss_pred EEcCCHHH-------HH-----HH-HHHhcCCCcEEEEEECC
Confidence 99865322 11 35 57789999999998643
No 150
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.21 E-value=4.9e-12 Score=108.47 Aligned_cols=112 Identities=15% Similarity=0.144 Sum_probs=79.8
Q ss_pred CCCeEEEEeccchHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhhhhhc---cCCCCCCC-------------------
Q 025141 102 NPKTIFIMGGGEGSTAREILRH--KTVEKVVMCDIDEEVVEFCKSYLVVN---KEAFSDPR------------------- 157 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~--~~~~~v~~VEid~~vi~~a~~~~~~~---~~~~~~~r------------------- 157 (257)
.+.+|||+|||+|.++..+++. .+..+|+++|+|+.+++.|++++... + . ..+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~ 127 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAG--L-TARELERREQSERFGKPSYLEA 127 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHH--H-HHHHHHHHHHHHHHCCHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhcc--c-cccchhhhhhhhhcccccchhh
Confidence 4679999999999999998875 33468999999999999999876432 1 0 011
Q ss_pred ------eE-------------EEEcchHHHHhc----CCCceeEEEEcCCCCCCCCcc---cCCchHHHHHHHHcCcCCC
Q 025141 158 ------LE-------------LVINDARAELES----RKESYDVIIGDLADPIEGGPC---YKLYTKSFYEFVVKPRLNP 211 (257)
Q Consensus 158 ------v~-------------i~~~Da~~~l~~----~~~~fDvIi~D~~~~~~~~p~---~~L~t~ef~~~~~~~~L~p 211 (257)
++ ++.+|+.+.... ..++||+|+++++-....... ..-....+++. +.+.|+|
T Consensus 128 ~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~-~~~~Lkp 206 (250)
T 1o9g_A 128 AQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRS-LASALPA 206 (250)
T ss_dssp HHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHH-HHHHSCT
T ss_pred hhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHH-HHHhcCC
Confidence 56 999998876532 345899999997521100000 00112478888 7999999
Q ss_pred CcEEEE
Q 025141 212 EGIFVT 217 (257)
Q Consensus 212 gGil~~ 217 (257)
||++++
T Consensus 207 gG~l~~ 212 (250)
T 1o9g_A 207 HAVIAV 212 (250)
T ss_dssp TCEEEE
T ss_pred CcEEEE
Confidence 999998
No 151
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.21 E-value=7e-11 Score=104.53 Aligned_cols=106 Identities=16% Similarity=0.164 Sum_probs=82.1
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++.+|||||||+|..+..+++..+ .+|+++|+++.+++.|++.+...+ ..++++++.+|+.+. +++||+|+
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~----~~~fD~v~ 160 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERFD-VNVIGLTLSKNQHARCEQVLASID---TNRSRQVLLQGWEDF----AEPVDRIV 160 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHTSC---CSSCEEEEESCGGGC----CCCCSEEE
T ss_pred CCcCEEEEEcccchHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcC---CCCceEEEECChHHC----CCCcCEEE
Confidence 4567999999999999999988643 499999999999999999876432 246899999998664 37899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+...-... .+ -....+++. +++.|+|||.+++..
T Consensus 161 ~~~~l~~~-~~---~~~~~~l~~-~~~~LkpgG~l~~~~ 194 (318)
T 2fk8_A 161 SIEAFEHF-GH---ENYDDFFKR-CFNIMPADGRMTVQS 194 (318)
T ss_dssp EESCGGGT-CG---GGHHHHHHH-HHHHSCTTCEEEEEE
T ss_pred EeChHHhc-CH---HHHHHHHHH-HHHhcCCCcEEEEEE
Confidence 87532110 10 123678898 799999999998865
No 152
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.21 E-value=6.5e-11 Score=102.85 Aligned_cols=99 Identities=18% Similarity=0.238 Sum_probs=78.9
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++.+||+||||+|..+..+++ ++ .+|+++|+++.+++.+++.+ ++++++.+|+.++- ..++||+|+
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~-~~-~~v~gvD~s~~~~~~a~~~~---------~~~~~~~~d~~~~~--~~~~fD~v~ 122 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQ-SG-AEVLGTDNAATMIEKARQNY---------PHLHFDVADARNFR--VDKPLDAVF 122 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHH-TT-CEEEEEESCHHHHHHHHHHC---------TTSCEEECCTTTCC--CSSCEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHh-CC-CeEEEEECCHHHHHHHHhhC---------CCCEEEECChhhCC--cCCCcCEEE
Confidence 4568999999999999999998 43 69999999999999999864 47889999987642 247899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+...-.+. + -...+++. +++.|+|||.+++..
T Consensus 123 ~~~~l~~~--~----d~~~~l~~-~~~~LkpgG~l~~~~ 154 (279)
T 3ccf_A 123 SNAMLHWV--K----EPEAAIAS-IHQALKSGGRFVAEF 154 (279)
T ss_dssp EESCGGGC--S----CHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EcchhhhC--c----CHHHHHHH-HHHhcCCCcEEEEEe
Confidence 87542221 1 12478888 799999999998865
No 153
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.21 E-value=5.2e-11 Score=100.60 Aligned_cols=103 Identities=20% Similarity=0.191 Sum_probs=80.7
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++++||+||||+|..+..+++. +..+++++|+++.+++.+++.+. ..+++++.+|+.+.. ...++||+|+
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~~~-~~~~~fD~v~ 112 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEH-GASYVLGLDLSEKMLARARAAGP-------DTGITYERADLDKLH-LPQDSFDLAY 112 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSC-------SSSEEEEECCGGGCC-CCTTCEEEEE
T ss_pred cCCCEEEEEcCcCCHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhcc-------cCCceEEEcChhhcc-CCCCCceEEE
Confidence 45689999999999999999986 33499999999999999998753 247999999987742 3357899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+...-.. .+ -...+++. ++++|+|||.+++..
T Consensus 113 ~~~~l~~--~~----~~~~~l~~-~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 113 SSLALHY--VE----DVARLFRT-VHQALSPGGHFVFST 144 (243)
T ss_dssp EESCGGG--CS----CHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred Eeccccc--cc----hHHHHHHH-HHHhcCcCcEEEEEe
Confidence 8754211 11 13578888 799999999998753
No 154
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.20 E-value=3.3e-11 Score=103.00 Aligned_cols=104 Identities=19% Similarity=0.204 Sum_probs=81.6
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++.+|||||||+|..+..+++. + .+|+++|+++.+++.+++.+. . ..++++++.+|+.+. ...+++||+|+
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~-~-~~v~~vD~s~~~~~~a~~~~~-~----~~~~~~~~~~d~~~~-~~~~~~fD~v~ 109 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIAR-G-YRYIALDADAAMLEVFRQKIA-G----VDRKVQVVQADARAI-PLPDESVHGVI 109 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTT-T-CEEEEEESCHHHHHHHHHHTT-T----SCTTEEEEESCTTSC-CSCTTCEEEEE
T ss_pred CCCCEEEEeCCcCCHHHHHHHHC-C-CEEEEEECCHHHHHHHHHHhh-c----cCCceEEEEcccccC-CCCCCCeeEEE
Confidence 45689999999999999999986 3 699999999999999999872 1 247899999998653 23357899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+...-++. + -...+++. ++++|+|||.+++..
T Consensus 110 ~~~~l~~~--~----~~~~~l~~-~~~~L~pgG~l~~~~ 141 (263)
T 2yqz_A 110 VVHLWHLV--P----DWPKVLAE-AIRVLKPGGALLEGW 141 (263)
T ss_dssp EESCGGGC--T----THHHHHHH-HHHHEEEEEEEEEEE
T ss_pred ECCchhhc--C----CHHHHHHH-HHHHCCCCcEEEEEe
Confidence 87542221 1 13578888 799999999988763
No 155
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.20 E-value=7e-11 Score=106.41 Aligned_cols=106 Identities=18% Similarity=0.166 Sum_probs=80.6
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++++|||||||+|.++..+++. +..+|++||+++ +++.|++++..++ ..++++++.+|+.++ ....++||+|+
T Consensus 63 ~~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~-~~~~a~~~~~~~~---~~~~i~~~~~d~~~~-~~~~~~~D~Iv 136 (340)
T 2fyt_A 63 FKDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSE-ILYQAMDIIRLNK---LEDTITLIKGKIEEV-HLPVEKVDVII 136 (340)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESST-HHHHHHHHHHHTT---CTTTEEEEESCTTTS-CCSCSCEEEEE
T ss_pred cCCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHH-HHHHHHHHHHHcC---CCCcEEEEEeeHHHh-cCCCCcEEEEE
Confidence 45689999999999999999986 456999999997 8999999876543 246899999998775 22347899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEE
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFV 216 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~ 216 (257)
++..... .........+++. +++.|+|||+++
T Consensus 137 s~~~~~~---l~~~~~~~~~l~~-~~~~LkpgG~li 168 (340)
T 2fyt_A 137 SEWMGYF---LLFESMLDSVLYA-KNKYLAKGGSVY 168 (340)
T ss_dssp ECCCBTT---BTTTCHHHHHHHH-HHHHEEEEEEEE
T ss_pred EcCchhh---ccCHHHHHHHHHH-HHhhcCCCcEEE
Confidence 9863111 0011123467887 789999999987
No 156
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.20 E-value=1.1e-10 Score=99.61 Aligned_cols=106 Identities=9% Similarity=0.076 Sum_probs=85.3
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
++..+|||||||+|.++..+++..+..+|+++|+++..++.|++++..++ ...+++++.+|+.+.+.. .++||+|+
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~g---l~~~I~~~~gD~l~~~~~-~~~~D~Iv 95 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHG---LTSKIDVRLANGLSAFEE-ADNIDTIT 95 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTT---CTTTEEEEECSGGGGCCG-GGCCCEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEECchhhcccc-ccccCEEE
Confidence 56689999999999999999997656789999999999999999987654 346899999999887642 23799988
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+.-- + . -.-.+++.. ..+.|+++|.++++.
T Consensus 96 iaGm-----G--g-~lI~~IL~~-~~~~l~~~~~lIlqp 125 (230)
T 3lec_A 96 ICGM-----G--G-RLIADILNN-DIDKLQHVKTLVLQP 125 (230)
T ss_dssp EEEE-----C--H-HHHHHHHHH-TGGGGTTCCEEEEEE
T ss_pred EeCC-----c--h-HHHHHHHHH-HHHHhCcCCEEEEEC
Confidence 7421 1 1 124578888 789999999999974
No 157
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.20 E-value=3.1e-11 Score=100.06 Aligned_cols=125 Identities=14% Similarity=0.122 Sum_probs=87.6
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH---------Hhc
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE---------LES 171 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~---------l~~ 171 (257)
.+..+|||||||+|+++..+++. ..+|++||+++.. ..++++++.+|+.+. +..
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~~---------------~~~~v~~~~~D~~~~~~~~~~~~~~~~ 86 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEME---------------EIAGVRFIRCDIFKETIFDDIDRALRE 86 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCCC---------------CCTTCEEEECCTTSSSHHHHHHHHHHH
T ss_pred CCCCEEEEEeecCCHHHHHHHHc--CCcEEEEeccccc---------------cCCCeEEEEccccCHHHHHHHHHHhhc
Confidence 45689999999999999999987 4699999999741 135899999997652 110
Q ss_pred -CCCceeEEEEcCCCCCCCCcc--cCC----chHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCc
Q 025141 172 -RKESYDVIIGDLADPIEGGPC--YKL----YTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKC 244 (257)
Q Consensus 172 -~~~~fDvIi~D~~~~~~~~p~--~~L----~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~F~~ 244 (257)
..++||+|++|++.... +.. .+. .....++. +.+.|+|||.+++..- .......+...+++.|..
T Consensus 87 ~~~~~~D~Vlsd~~~~~~-g~~~~d~~~~~~l~~~~l~~-a~~~LkpGG~lv~k~~------~~~~~~~~~~~l~~~F~~ 158 (191)
T 3dou_A 87 EGIEKVDDVVSDAMAKVS-GIPSRDHAVSYQIGQRVMEI-AVRYLRNGGNVLLKQF------QGDMTNDFIAIWRKNFSS 158 (191)
T ss_dssp HTCSSEEEEEECCCCCCC-SCHHHHHHHHHHHHHHHHHH-HHHHEEEEEEEEEEEE------CSTHHHHHHHHHGGGEEE
T ss_pred ccCCcceEEecCCCcCCC-CCcccCHHHHHHHHHHHHHH-HHHHccCCCEEEEEEc------CCCCHHHHHHHHHHhcCE
Confidence 01489999999863221 110 000 01355666 6899999999998642 122356788889999998
Q ss_pred eEEEee
Q 025141 245 GCCALF 250 (257)
Q Consensus 245 v~~~~~ 250 (257)
|..+.-
T Consensus 159 v~~~kP 164 (191)
T 3dou_A 159 YKISKP 164 (191)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 887653
No 158
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.19 E-value=4.8e-11 Score=98.69 Aligned_cols=118 Identities=17% Similarity=0.074 Sum_probs=82.7
Q ss_pred HHHHHHHHHhhcCCCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHH
Q 025141 88 YHESLVHPALLHHPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA 167 (257)
Q Consensus 88 y~e~l~~~~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~ 167 (257)
|.+.+..+.. .+++.+||++|||+|..+..++...+ .+|+++|+++.+++.+++++... .++++++.+|+.+
T Consensus 11 ~~~~~~~~~~--~~~~~~vLDiGcG~G~~~~~~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~ 82 (209)
T 2p8j_A 11 LYRFLKYCNE--SNLDKTVLDCGAGGDLPPLSIFVEDG-YKTYGIEISDLQLKKAENFSREN-----NFKLNISKGDIRK 82 (209)
T ss_dssp HHHHHHHHHH--SSSCSEEEEESCCSSSCTHHHHHHTT-CEEEEEECCHHHHHHHHHHHHHH-----TCCCCEEECCTTS
T ss_pred HHHHHHHHhc--cCCCCEEEEECCCCCHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhc-----CCceEEEECchhh
Confidence 4554443322 34568999999999997444444344 59999999999999999987643 2578999999876
Q ss_pred HHhcCCCceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 168 ELESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 168 ~l~~~~~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
. ....++||+|++...-.. .+ .-....+++. +++.|+|||++++..
T Consensus 83 ~-~~~~~~fD~v~~~~~l~~--~~--~~~~~~~l~~-~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 83 L-PFKDESMSFVYSYGTIFH--MR--KNDVKEAIDE-IKRVLKPGGLACINF 128 (209)
T ss_dssp C-CSCTTCEEEEEECSCGGG--SC--HHHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred C-CCCCCceeEEEEcChHHh--CC--HHHHHHHHHH-HHHHcCCCcEEEEEE
Confidence 3 233578999998642111 00 0123578888 799999999998764
No 159
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.19 E-value=5.8e-11 Score=100.40 Aligned_cols=102 Identities=18% Similarity=0.189 Sum_probs=81.3
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
+++.+||+||||+|..+..+++. + .+|+++|+++.+++.+++.. ..++++++.+|+.+. ....++||+|+
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~-~-~~v~~vD~s~~~~~~a~~~~-------~~~~~~~~~~d~~~~-~~~~~~fD~v~ 121 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRT-G-YKAVGVDISEVMIQKGKERG-------EGPDLSFIKGDLSSL-PFENEQFEAIM 121 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT-T-CEEEEEESCHHHHHHHHTTT-------CBTTEEEEECBTTBC-SSCTTCEEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHc-C-CeEEEEECCHHHHHHHHhhc-------ccCCceEEEcchhcC-CCCCCCccEEE
Confidence 46789999999999999999986 3 58999999999999999874 246899999998764 23357899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+...-... + -...+++. +++.|+|||++++..
T Consensus 122 ~~~~l~~~--~----~~~~~l~~-~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 122 AINSLEWT--E----EPLRALNE-IKRVLKSDGYACIAI 153 (242)
T ss_dssp EESCTTSS--S----CHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EcChHhhc--c----CHHHHHHH-HHHHhCCCeEEEEEE
Confidence 87543221 1 12478888 799999999998865
No 160
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.19 E-value=8.1e-11 Score=97.34 Aligned_cols=110 Identities=19% Similarity=0.215 Sum_probs=81.9
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++.+||+||||+|.++..+++.. ..+|+++|+++.+++.+++.+.. .++++++.+|+.+. ....++||+|+
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~-~~~v~~~D~s~~~~~~a~~~~~~------~~~i~~~~~d~~~~-~~~~~~fD~v~ 112 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGG-FPNVTSVDYSSVVVAAMQACYAH------VPQLRWETMDVRKL-DFPSASFDVVL 112 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTT-CCCEEEEESCHHHHHHHHHHTTT------CTTCEEEECCTTSC-CSCSSCEEEEE
T ss_pred CCCCeEEEECCCCcHHHHHHHHcC-CCcEEEEeCCHHHHHHHHHhccc------CCCcEEEEcchhcC-CCCCCcccEEE
Confidence 567899999999999999999864 34899999999999999998652 36899999998764 33347899999
Q ss_pred EcCCC---------CCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 181 GDLAD---------PIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 181 ~D~~~---------~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+...- ++...+...-....+++. ++++|+|||++++..
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~LkpgG~li~~~ 159 (215)
T 2pxx_A 113 EKGTLDALLAGERDPWTVSSEGVHTVDQVLSE-VSRVLVPGGRFISMT 159 (215)
T ss_dssp EESHHHHHTTTCSCTTSCCHHHHHHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred ECcchhhhccccccccccccchhHHHHHHHHH-HHHhCcCCCEEEEEe
Confidence 86431 110000000112578888 799999999998865
No 161
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.19 E-value=2.5e-11 Score=105.66 Aligned_cols=112 Identities=14% Similarity=0.129 Sum_probs=83.6
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
+++.+||+||||+|..+..+++.+ ..+++++|+++.+++.|++.+...+ ...+++++.+|+.+.-....++||+|+
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~fD~v~ 138 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAG-IGEYYGVDIAEVSINDARVRARNMK---RRFKVFFRAQDSYGRHMDLGKEFDVIS 138 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHT-CSEEEEEESCHHHHHHHHHHHHTSC---CSSEEEEEESCTTTSCCCCSSCEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcC---CCccEEEEECCccccccCCCCCcCEEE
Confidence 567899999999999998888764 4599999999999999999876432 235799999998765222357899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+...-+..... .-....+++. ++++|+|||.+++..
T Consensus 139 ~~~~l~~~~~~--~~~~~~~l~~-~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 139 SQFSFHYAFST--SESLDIAQRN-IARHLRPGGYFIMTV 174 (298)
T ss_dssp EESCGGGGGSS--HHHHHHHHHH-HHHTEEEEEEEEEEE
T ss_pred ECchhhhhcCC--HHHHHHHHHH-HHHhcCCCCEEEEEE
Confidence 87532110000 0113578898 799999999999764
No 162
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.19 E-value=2.9e-11 Score=106.21 Aligned_cols=110 Identities=16% Similarity=0.200 Sum_probs=81.4
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
+.+.+||+||||+|..+..+++. + .+|+++|+++.+++.|++.+...+.. ...+++++.+|+.++- ..++||+|+
T Consensus 81 ~~~~~vLDlGcG~G~~~~~l~~~-~-~~v~gvD~s~~~~~~a~~~~~~~~~~-~~~~v~~~~~d~~~~~--~~~~fD~v~ 155 (299)
T 3g2m_A 81 PVSGPVLELAAGMGRLTFPFLDL-G-WEVTALELSTSVLAAFRKRLAEAPAD-VRDRCTLVQGDMSAFA--LDKRFGTVV 155 (299)
T ss_dssp CCCSCEEEETCTTTTTHHHHHTT-T-CCEEEEESCHHHHHHHHHHHHTSCHH-HHTTEEEEECBTTBCC--CSCCEEEEE
T ss_pred CCCCcEEEEeccCCHHHHHHHHc-C-CeEEEEECCHHHHHHHHHHHhhcccc-cccceEEEeCchhcCC--cCCCcCEEE
Confidence 45569999999999999999986 3 58999999999999999987632100 0158999999988742 257899988
Q ss_pred EcCC-CCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecC
Q 025141 181 GDLA-DPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (257)
Q Consensus 181 ~D~~-~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~ 220 (257)
+... -... .+ -....+++. +++.|+|||++++...
T Consensus 156 ~~~~~~~~~-~~---~~~~~~l~~-~~~~L~pgG~l~~~~~ 191 (299)
T 3g2m_A 156 ISSGSINEL-DE---ADRRGLYAS-VREHLEPGGKFLLSLA 191 (299)
T ss_dssp ECHHHHTTS-CH---HHHHHHHHH-HHHHEEEEEEEEEEEE
T ss_pred ECCcccccC-CH---HHHHHHHHH-HHHHcCCCcEEEEEee
Confidence 6421 1110 11 012578898 7999999999998753
No 163
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.19 E-value=1.3e-10 Score=108.69 Aligned_cols=134 Identities=10% Similarity=0.032 Sum_probs=94.9
Q ss_pred CCCCeEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvI 179 (257)
.++.+|||+|||+|+.+..++.. .+..+|+++|+++..++.+++++...+ -.++.++.+|+.++.....+.||+|
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g----~~nv~v~~~Da~~l~~~~~~~FD~I 179 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWG----VSNAIVTNHAPAELVPHFSGFFDRI 179 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHT----CSSEEEECCCHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcC----CCceEEEeCCHHHhhhhccccCCEE
Confidence 45689999999999999988875 334699999999999999999987553 2479999999998865446789999
Q ss_pred EEcCCCCCC----CCcc-------cC-----CchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCC
Q 025141 180 IGDLADPIE----GGPC-------YK-----LYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFK 243 (257)
Q Consensus 180 i~D~~~~~~----~~p~-------~~-----L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~F~ 243 (257)
++|++-... ..|. .. -...++++. +.+.|+|||+++..+.+. . ++..+.+++.+-+.++
T Consensus 180 l~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~-a~~~LkpGG~LvYsTCs~---~-~eEne~vv~~~l~~~~ 254 (456)
T 3m4x_A 180 VVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSS-AIKMLKNKGQLIYSTCTF---A-PEENEEIISWLVENYP 254 (456)
T ss_dssp EEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHH-HHHTEEEEEEEEEEESCC---C-GGGTHHHHHHHHHHSS
T ss_pred EECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHH-HHHhcCCCcEEEEEEeec---c-cccCHHHHHHHHHhCC
Confidence 999872110 0110 00 012377888 789999999998765443 2 2233444444444444
No 164
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.19 E-value=3e-11 Score=102.00 Aligned_cols=93 Identities=16% Similarity=0.315 Sum_probs=75.3
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcC-CCceeEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR-KESYDVI 179 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~-~~~fDvI 179 (257)
+++.+||+||||+|..+..+++. + .+|+++|+++.+++.++++ .++++++.+|+.+.+... .++||+|
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~-~-~~v~~vD~s~~~~~~a~~~---------~~~~~~~~~d~~~~~~~~~~~~fD~v 115 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ-A-ARWAAYDFSPELLKLARAN---------APHADVYEWNGKGELPAGLGAPFGLI 115 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG-S-SEEEEEESCHHHHHHHHHH---------CTTSEEEECCSCSSCCTTCCCCEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc-C-CEEEEEECCHHHHHHHHHh---------CCCceEEEcchhhccCCcCCCCEEEE
Confidence 56789999999999999999987 3 5999999999999999987 257899999986555444 5789999
Q ss_pred EEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEE
Q 025141 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~ 217 (257)
++.. .+ ..+++. +++.|+|||.++.
T Consensus 116 ~~~~------~~------~~~l~~-~~~~LkpgG~l~~ 140 (226)
T 3m33_A 116 VSRR------GP------TSVILR-LPELAAPDAHFLY 140 (226)
T ss_dssp EEES------CC------SGGGGG-HHHHEEEEEEEEE
T ss_pred EeCC------CH------HHHHHH-HHHHcCCCcEEEE
Confidence 9872 11 133456 6889999999983
No 165
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.19 E-value=1.5e-11 Score=105.54 Aligned_cols=80 Identities=10% Similarity=0.106 Sum_probs=63.4
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHH-HHhcC----CCce
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA-ELESR----KESY 176 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~-~l~~~----~~~f 176 (257)
++.+|||+|||+|.++..+++..+..+|+++|+++.+++.|++++..++ ...+++++.+|+.+ ++... .++|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNN---LSDLIKVVKVPQKTLLMDALKEESEIIY 141 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTT---CTTTEEEEECCTTCSSTTTSTTCCSCCB
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcC---CCccEEEEEcchhhhhhhhhhcccCCcc
Confidence 4679999999999999888875333699999999999999999987543 23579999999876 23221 2589
Q ss_pred eEEEEcCC
Q 025141 177 DVIIGDLA 184 (257)
Q Consensus 177 DvIi~D~~ 184 (257)
|+|+++++
T Consensus 142 D~i~~npp 149 (254)
T 2h00_A 142 DFCMCNPP 149 (254)
T ss_dssp SEEEECCC
T ss_pred cEEEECCC
Confidence 99999976
No 166
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.19 E-value=7.6e-11 Score=98.23 Aligned_cols=103 Identities=19% Similarity=0.160 Sum_probs=79.4
Q ss_pred CCCCeEEEEeccchHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvI 179 (257)
.++.+||+||||+|..+..+++.. +..+|+++|+++.+++.+++++...+ .++++++.+|+...+. ..++||+|
T Consensus 76 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~~-~~~~fD~v 150 (215)
T 2yxe_A 76 KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLG----YDNVIVIVGDGTLGYE-PLAPYDRI 150 (215)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHT----CTTEEEEESCGGGCCG-GGCCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC----CCCeEEEECCcccCCC-CCCCeeEE
Confidence 456799999999999999998864 33699999999999999999886442 2469999999865433 24679999
Q ss_pred EEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCC
Q 025141 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGP 221 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~ 221 (257)
+++...+. +. +. +.+.|+|||++++...+
T Consensus 151 ~~~~~~~~-------~~-----~~-~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 151 YTTAAGPK-------IP-----EP-LIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp EESSBBSS-------CC-----HH-HHHTEEEEEEEEEEESS
T ss_pred EECCchHH-------HH-----HH-HHHHcCCCcEEEEEECC
Confidence 99865322 11 35 67899999999987643
No 167
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.19 E-value=4e-11 Score=101.17 Aligned_cols=108 Identities=20% Similarity=0.253 Sum_probs=80.1
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCC------CcEEEEEECCHHHHHHHHhhhhhccC-CCCCCCeEEEEcchHHHHhcCC
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKT------VEKVVMCDIDEEVVEFCKSYLVVNKE-AFSDPRLELVINDARAELESRK 173 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~------~~~v~~VEid~~vi~~a~~~~~~~~~-~~~~~rv~i~~~Da~~~l~~~~ 173 (257)
.+..+||+||||+|..+..+++..+ ..+|+++|+++.+++.|++++...+. .+..++++++.+|+.+.+.. .
T Consensus 83 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~ 161 (227)
T 1r18_A 83 KPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPP-N 161 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGG-G
T ss_pred CCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCc-C
Confidence 3457999999999999998887533 14899999999999999998753210 00025899999999874322 3
Q ss_pred CceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCC
Q 025141 174 ESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPA 222 (257)
Q Consensus 174 ~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~ 222 (257)
++||+|+++...+. +. +. +.+.|+|||++++..+++
T Consensus 162 ~~fD~I~~~~~~~~-------~~-----~~-~~~~LkpgG~lvi~~~~~ 197 (227)
T 1r18_A 162 APYNAIHVGAAAPD-------TP-----TE-LINQLASGGRLIVPVGPD 197 (227)
T ss_dssp CSEEEEEECSCBSS-------CC-----HH-HHHTEEEEEEEEEEESCS
T ss_pred CCccEEEECCchHH-------HH-----HH-HHHHhcCCCEEEEEEecC
Confidence 67999999865322 21 45 678999999999987653
No 168
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.18 E-value=1.1e-09 Score=90.64 Aligned_cols=118 Identities=17% Similarity=0.153 Sum_probs=85.9
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++++|||+|||+|.++..+++. +..+|+++|+++.+++.+++++...+ -+++++.+|+.++ +.+||+|+
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~-----~~~~~~~~d~~~~----~~~~D~v~ 117 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLL-GAKEVICVEVDKEAVDVLIENLGEFK-----GKFKVFIGDVSEF----NSRVDIVI 117 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHTGGGT-----TSEEEEESCGGGC----CCCCSEEE
T ss_pred CCcCEEEEeeCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcC-----CCEEEEECchHHc----CCCCCEEE
Confidence 35689999999999999999886 34589999999999999999887542 1799999998874 35899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhh
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV 241 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~ 241 (257)
+|++-... ..-....+++. +.+.| |++++.... .......+.+.+.+.
T Consensus 118 ~~~p~~~~----~~~~~~~~l~~-~~~~l--~~~~~~~~~------~~~~~~~~~~~l~~~ 165 (207)
T 1wy7_A 118 MNPPFGSQ----RKHADRPFLLK-AFEIS--DVVYSIHLA------KPEVRRFIEKFSWEH 165 (207)
T ss_dssp ECCCCSSS----STTTTHHHHHH-HHHHC--SEEEEEEEC------CHHHHHHHHHHHHHT
T ss_pred EcCCCccc----cCCchHHHHHH-HHHhc--CcEEEEEeC------CcCCHHHHHHHHHHC
Confidence 99873221 11224677887 67777 676665421 233444555555544
No 169
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.18 E-value=1.5e-10 Score=99.72 Aligned_cols=106 Identities=11% Similarity=0.111 Sum_probs=84.8
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
++..+|||||||+|.++..+++..+..+|+++|+|+..++.|++++..++ ...+++++.+|+.+.+.. .++||+|+
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~g---l~~~I~v~~gD~l~~~~~-~~~~D~Iv 95 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSG---LTEQIDVRKGNGLAVIEK-KDAIDTIV 95 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTT---CTTTEEEEECSGGGGCCG-GGCCCEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC---CCceEEEEecchhhccCc-cccccEEE
Confidence 56689999999999999999997556789999999999999999987664 346899999999887642 23699988
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+.-. + . -.-.+++.. ..+.|+++|.++++.
T Consensus 96 iagm-----G--g-~lI~~IL~~-~~~~L~~~~~lIlq~ 125 (244)
T 3gnl_A 96 IAGM-----G--G-TLIRTILEE-GAAKLAGVTKLILQP 125 (244)
T ss_dssp EEEE-----C--H-HHHHHHHHH-TGGGGTTCCEEEEEE
T ss_pred EeCC-----c--h-HHHHHHHHH-HHHHhCCCCEEEEEc
Confidence 7321 1 1 123577888 789999999999974
No 170
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.17 E-value=1.4e-11 Score=104.79 Aligned_cols=111 Identities=13% Similarity=-0.026 Sum_probs=78.5
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECC-HHHHHHH---HhhhhhccCCCCCCCeEEEEcchHHHHhcCCCce
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDID-EEVVEFC---KSYLVVNKEAFSDPRLELVINDARAELESRKESY 176 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid-~~vi~~a---~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~f 176 (257)
.++.+|||||||+|..+..+++..+..+|++||++ +.+++.| ++..... .-++++++.+|+.++-....+.+
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~----~~~~v~~~~~d~~~l~~~~~d~v 98 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKG----GLSNVVFVIAAAESLPFELKNIA 98 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGT----CCSSEEEECCBTTBCCGGGTTCE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHc----CCCCeEEEEcCHHHhhhhccCeE
Confidence 45679999999999999999865455799999999 7777776 7665433 23689999999877622223667
Q ss_pred eEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEE
Q 025141 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (257)
Q Consensus 177 DvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~ 217 (257)
|.|.+..+.+.. .........+++++ ++++|||||.+++
T Consensus 99 ~~i~~~~~~~~~-~~~~~~~~~~~l~~-~~r~LkpGG~l~i 137 (225)
T 3p2e_A 99 DSISILFPWGTL-LEYVIKPNRDILSN-VADLAKKEAHFEF 137 (225)
T ss_dssp EEEEEESCCHHH-HHHHHTTCHHHHHH-HHTTEEEEEEEEE
T ss_pred EEEEEeCCCcHH-hhhhhcchHHHHHH-HHHhcCCCcEEEE
Confidence 888776542210 00001113578898 7999999999988
No 171
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.17 E-value=7e-11 Score=99.06 Aligned_cols=112 Identities=15% Similarity=0.155 Sum_probs=82.9
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhcc-CCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNK-EAFSDPRLELVINDARAELESRKESYDVI 179 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~-~~~~~~rv~i~~~Da~~~l~~~~~~fDvI 179 (257)
+++++||+||||+|..+..+++. + .+|+++|+++.+++.+++.+...+ ......+++++.+|+.+. ....++||+|
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~-~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~D~v 105 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK-G-YSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSL-SFHDSSFDFA 105 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSC-CSCTTCEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhC-C-CeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEeccccc-CCCCCceeEE
Confidence 46789999999999999999986 3 599999999999999999876432 111234789999998754 2335789999
Q ss_pred EEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
++...-.....+ -....+++. +++.|+|||.+++..
T Consensus 106 ~~~~~l~~~~~~---~~~~~~l~~-~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 106 VMQAFLTSVPDP---KERSRIIKE-VFRVLKPGAYLYLVE 141 (235)
T ss_dssp EEESCGGGCCCH---HHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EEcchhhcCCCH---HHHHHHHHH-HHHHcCCCeEEEEEE
Confidence 987542110011 112368898 799999999998764
No 172
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.17 E-value=1.5e-10 Score=104.51 Aligned_cols=106 Identities=16% Similarity=0.166 Sum_probs=80.3
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++++||+||||+|.++..+++. +..+|++||+++ +++.|++.+..++ ..++++++.+|+.+. ..+++||+|+
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~---l~~~v~~~~~d~~~~--~~~~~~D~Iv 121 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSNN---LTDRIVVIPGKVEEV--SLPEQVDIII 121 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTT---CTTTEEEEESCTTTC--CCSSCEEEEE
T ss_pred CCcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHH-HHHHHHHHHHHcC---CCCcEEEEEcchhhC--CCCCceeEEE
Confidence 35689999999999999999986 457999999997 7799998876542 246899999998764 2236899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
++...... . .-...+.+.. +++.|+|||++++.
T Consensus 122 s~~~~~~~-~---~~~~~~~l~~-~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 122 SEPMGYML-F---NERMLESYLH-AKKYLKPSGNMFPT 154 (348)
T ss_dssp ECCCBTTB-T---TTSHHHHHHH-GGGGEEEEEEEESC
T ss_pred EeCchhcC-C---hHHHHHHHHH-HHhhcCCCeEEEEe
Confidence 98652110 0 0112467777 79999999999854
No 173
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.17 E-value=6.2e-11 Score=100.16 Aligned_cols=104 Identities=18% Similarity=0.209 Sum_probs=79.9
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
++.++||+||||+|..+..+++. .+++++|+++.+++.|++.+... ..+++++.+|+.+.- ..++||+|+
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~~--~~~~fD~v~ 101 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMET-----NRHVDFWVQDMRELE--LPEPVDAIT 101 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHT-----TCCCEEEECCGGGCC--CSSCEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhc-----CCceEEEEcChhhcC--CCCCcCEEE
Confidence 44589999999999999998885 59999999999999999987643 257899999987752 237899999
Q ss_pred EcC--CCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 181 GDL--ADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 181 ~D~--~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+.. ..... .+ -....+++. +++.|+|||++++..
T Consensus 102 ~~~~~~~~~~-~~---~~~~~~l~~-~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 102 ILCDSLNYLQ-TE---ADVKQTFDS-AARLLTDGGKLLFDV 137 (243)
T ss_dssp ECTTGGGGCC-SH---HHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EeCCchhhcC-CH---HHHHHHHHH-HHHhcCCCeEEEEEc
Confidence 864 11110 00 113467888 799999999999854
No 174
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.17 E-value=5.8e-11 Score=100.23 Aligned_cols=106 Identities=13% Similarity=0.156 Sum_probs=81.4
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
+++.+||+||||+|..+..+++. + .+++++|+++.+++.+++.+...+ .+++++.+|+.+... .++||+|+
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~~~-~-~~~~~~D~s~~~~~~a~~~~~~~~-----~~~~~~~~d~~~~~~--~~~fD~v~ 106 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLCPK-F-KNTWAVDLSQEMLSEAENKFRSQG-----LKPRLACQDISNLNI--NRKFDLIT 106 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGG-S-SEEEEECSCHHHHHHHHHHHHHTT-----CCCEEECCCGGGCCC--SCCEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHC-C-CcEEEEECCHHHHHHHHHHHhhcC-----CCeEEEecccccCCc--cCCceEEE
Confidence 46789999999999999999886 3 589999999999999999876432 378999999877532 27899999
Q ss_pred EcC-CCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 181 GDL-ADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 181 ~D~-~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+.. .-+....+ -....+++. +++.|+|||++++..
T Consensus 107 ~~~~~l~~~~~~---~~~~~~l~~-~~~~L~pgG~l~~~~ 142 (246)
T 1y8c_A 107 CCLDSTNYIIDS---DDLKKYFKA-VSNHLKEGGVFIFDI 142 (246)
T ss_dssp ECTTGGGGCCSH---HHHHHHHHH-HHTTEEEEEEEEEEE
T ss_pred EcCccccccCCH---HHHHHHHHH-HHHhcCCCcEEEEEe
Confidence 864 21110000 123578898 799999999999854
No 175
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.17 E-value=1.3e-10 Score=104.13 Aligned_cols=106 Identities=16% Similarity=0.223 Sum_probs=80.2
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~ 181 (257)
++++|||||||+|.++..+++. +..+|++||++ .+++.|++.+..++ ..++++++.+|+.+. ....++||+|++
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s-~~~~~a~~~~~~~~---~~~~i~~~~~d~~~~-~~~~~~~D~Ivs 111 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMS-SIIEMAKELVELNG---FSDKITLLRGKLEDV-HLPFPKVDIIIS 111 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESS-THHHHHHHHHHHTT---CTTTEEEEESCTTTS-CCSSSCEEEEEE
T ss_pred CCCEEEEecCccHHHHHHHHHC-CCCEEEEEChH-HHHHHHHHHHHHcC---CCCCEEEEECchhhc-cCCCCcccEEEE
Confidence 5679999999999999999986 45699999999 58999999876543 246899999998775 223478999999
Q ss_pred cCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEE
Q 025141 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (257)
Q Consensus 182 D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~ 217 (257)
+...... . ..-.-..++.. +++.|+|||+++.
T Consensus 112 ~~~~~~l--~-~~~~~~~~l~~-~~~~LkpgG~li~ 143 (328)
T 1g6q_1 112 EWMGYFL--L-YESMMDTVLYA-RDHYLVEGGLIFP 143 (328)
T ss_dssp CCCBTTB--S-TTCCHHHHHHH-HHHHEEEEEEEES
T ss_pred eCchhhc--c-cHHHHHHHHHH-HHhhcCCCeEEEE
Confidence 8653210 0 11123467777 6899999999973
No 176
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.16 E-value=5.5e-11 Score=100.04 Aligned_cols=107 Identities=14% Similarity=0.140 Sum_probs=80.0
Q ss_pred CCCCeEEEEeccchHHHHHHHhcC-----CCcEEEEEECCHHHHHHHHhhhhhcc-CCCCCCCeEEEEcchHHHHh---c
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHK-----TVEKVVMCDIDEEVVEFCKSYLVVNK-EAFSDPRLELVINDARAELE---S 171 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~-----~~~~v~~VEid~~vi~~a~~~~~~~~-~~~~~~rv~i~~~Da~~~l~---~ 171 (257)
.++.+||+||||+|..+..+++.. +..+|+++|+++.+++.|++++...+ .....++++++.+|+.+... .
T Consensus 79 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 158 (227)
T 2pbf_A 79 KPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKK 158 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCc
Confidence 456899999999999999988864 23599999999999999999876431 00013689999999987431 1
Q ss_pred CCCceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecC
Q 025141 172 RKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (257)
Q Consensus 172 ~~~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~ 220 (257)
..++||+|+++...+ ++ ++. +.+.|+|||++++...
T Consensus 159 ~~~~fD~I~~~~~~~-------~~-----~~~-~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 159 ELGLFDAIHVGASAS-------EL-----PEI-LVDLLAENGKLIIPIE 194 (227)
T ss_dssp HHCCEEEEEECSBBS-------SC-----CHH-HHHHEEEEEEEEEEEE
T ss_pred cCCCcCEEEECCchH-------HH-----HHH-HHHhcCCCcEEEEEEc
Confidence 236799999986532 12 255 5788999999998753
No 177
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.16 E-value=6.4e-11 Score=100.85 Aligned_cols=140 Identities=14% Similarity=0.151 Sum_probs=95.6
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++.+||+||||+|..+..+++.. ..+|+++|+++.+++.+++.+... ++++++.+|+.+. ....++||+|+
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~d~~~~-~~~~~~fD~v~ 163 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGM------PVGKFILASMETA-TLPPNTYDLIV 163 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTS------SEEEEEESCGGGC-CCCSSCEEEEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccC------CceEEEEccHHHC-CCCCCCeEEEE
Confidence 456899999999999999988763 468999999999999999986422 6899999998764 33457899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCC--CCC-------CChHHHHHHHHHHhhh-CCceEEEee
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPA--GIF-------SHTEVFSCIYNTLRQV-FKCGCCALF 250 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~--~~~-------~~~~~~~~~~~~l~~~-F~~v~~~~~ 250 (257)
+...-.. .+ .-....+++. +++.|+|||++++..... ..+ ........+.+.|++. |..+.....
T Consensus 164 ~~~~l~~--~~--~~~~~~~l~~-~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 238 (254)
T 1xtp_A 164 IQWTAIY--LT--DADFVKFFKH-CQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEAFQ 238 (254)
T ss_dssp EESCGGG--SC--HHHHHHHHHH-HHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEEEC
T ss_pred Ecchhhh--CC--HHHHHHHHHH-HHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEeeec
Confidence 8653211 10 0113578888 799999999988754210 000 0001224555666655 777766555
Q ss_pred cCc
Q 025141 251 SSY 253 (257)
Q Consensus 251 ~~~ 253 (257)
..|
T Consensus 239 ~~~ 241 (254)
T 1xtp_A 239 EEW 241 (254)
T ss_dssp TTC
T ss_pred CCC
Confidence 444
No 178
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.16 E-value=7.7e-11 Score=97.16 Aligned_cols=100 Identities=16% Similarity=0.227 Sum_probs=78.7
Q ss_pred eEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEEEcCC
Q 025141 105 TIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDLA 184 (257)
Q Consensus 105 ~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~D~~ 184 (257)
+||+||||+|..+..+++. + .+++++|+++.+++.+++.+...+ .+++++.+|+.+. ....++||+|++...
T Consensus 32 ~vLdiGcG~G~~~~~l~~~-~-~~v~~vD~s~~~~~~a~~~~~~~~-----~~~~~~~~d~~~~-~~~~~~fD~v~~~~~ 103 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL-G-YEVTAVDQSSVGLAKAKQLAQEKG-----VKITTVQSNLADF-DIVADAWEGIVSIFC 103 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT-T-CEEEEECSSHHHHHHHHHHHHHHT-----CCEEEECCBTTTB-SCCTTTCSEEEEECC
T ss_pred CEEEECCCCCHhHHHHHhC-C-CeEEEEECCHHHHHHHHHHHHhcC-----CceEEEEcChhhc-CCCcCCccEEEEEhh
Confidence 9999999999999999886 3 599999999999999999876442 3789999998765 223478999998532
Q ss_pred CCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 185 DPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 185 ~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
.. .+ -....+++. +++.|+|||.+++..
T Consensus 104 -~~--~~---~~~~~~l~~-~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 104 -HL--PS---SLRQQLYPK-VYQGLKPGGVFILEG 131 (202)
T ss_dssp -CC--CH---HHHHHHHHH-HHTTCCSSEEEEEEE
T ss_pred -cC--CH---HHHHHHHHH-HHHhcCCCcEEEEEE
Confidence 11 11 123578888 799999999998864
No 179
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.16 E-value=4.7e-10 Score=92.57 Aligned_cols=97 Identities=19% Similarity=0.163 Sum_probs=73.2
Q ss_pred CCCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025141 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (257)
Q Consensus 100 ~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvI 179 (257)
..++++|||+|||+|.++..+++. +..+|++||+++.+++.|++++. +++++.+|+.++ +++||+|
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~---------~~~~~~~d~~~~----~~~~D~v 114 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCG---------GVNFMVADVSEI----SGKYDTW 114 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCT---------TSEEEECCGGGC----CCCEEEE
T ss_pred CCCCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcC---------CCEEEECcHHHC----CCCeeEE
Confidence 346789999999999999999886 45689999999999999998753 689999998874 3789999
Q ss_pred EEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEE
Q 025141 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~ 217 (257)
++|++-... . .-....+++. +.+.| |+++++
T Consensus 115 ~~~~p~~~~--~--~~~~~~~l~~-~~~~~--g~~~~~ 145 (200)
T 1ne2_A 115 IMNPPFGSV--V--KHSDRAFIDK-AFETS--MWIYSI 145 (200)
T ss_dssp EECCCC-----------CHHHHHH-HHHHE--EEEEEE
T ss_pred EECCCchhc--c--CchhHHHHHH-HHHhc--CcEEEE
Confidence 999863321 1 1123577888 67777 554444
No 180
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.16 E-value=1e-10 Score=99.22 Aligned_cols=103 Identities=24% Similarity=0.288 Sum_probs=78.4
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++.+||+||||+|.++..+++..+ .+|+++|+++.+++.|++++...+ -++++++.+|+..-+.. ..+||+|+
T Consensus 90 ~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~----~~~v~~~~~d~~~~~~~-~~~fD~Ii 163 (235)
T 1jg1_A 90 KPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAG----VKNVHVILGDGSKGFPP-KAPYDVII 163 (235)
T ss_dssp CTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTT----CCSEEEEESCGGGCCGG-GCCEEEEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcC----CCCcEEEECCcccCCCC-CCCccEEE
Confidence 4567999999999999999998654 689999999999999999886442 24699999998332221 24699999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCC
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPA 222 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~ 222 (257)
++...+. +. +. +.+.|+|||++++....+
T Consensus 164 ~~~~~~~-------~~-----~~-~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 164 VTAGAPK-------IP-----EP-LIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp ECSBBSS-------CC-----HH-HHHTEEEEEEEEEEECSS
T ss_pred ECCcHHH-------HH-----HH-HHHhcCCCcEEEEEEecC
Confidence 9864321 11 24 577999999999887543
No 181
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.16 E-value=1.4e-10 Score=97.73 Aligned_cols=99 Identities=21% Similarity=0.340 Sum_probs=78.2
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++.+||+||||+|..+..+++.. .+|+++|+++.+++.+++++... ++++++.+|+.+.+. ..++||+|+
T Consensus 69 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~------~~v~~~~~d~~~~~~-~~~~fD~v~ 139 (231)
T 1vbf_A 69 HKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYY------NNIKLILGDGTLGYE-EEKPYDRVV 139 (231)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTC------SSEEEEESCGGGCCG-GGCCEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhc------CCeEEEECCcccccc-cCCCccEEE
Confidence 456799999999999999999864 69999999999999999987643 289999999877332 246899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCC
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGP 221 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~ 221 (257)
++..-+ ++. .. +.+.|+|||++++...+
T Consensus 140 ~~~~~~-------~~~-----~~-~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 140 VWATAP-------TLL-----CK-PYEQLKEGGIMILPIGV 167 (231)
T ss_dssp ESSBBS-------SCC-----HH-HHHTEEEEEEEEEEECS
T ss_pred ECCcHH-------HHH-----HH-HHHHcCCCcEEEEEEcC
Confidence 986432 121 34 57899999999987643
No 182
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.15 E-value=5.1e-11 Score=103.94 Aligned_cols=115 Identities=8% Similarity=0.070 Sum_probs=81.6
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHh--cCCCceeE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELE--SRKESYDV 178 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~--~~~~~fDv 178 (257)
.++.+||+||||+|..+..+++. + .+|+++|+++.+++.|++...........+++.+..+|+.+.-. ...++||+
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~-~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~ 133 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEE-G-FSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDA 133 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHC-C-CeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEE
Confidence 35689999999999999999986 3 49999999999999999875321100112578899999877642 23578999
Q ss_pred EEEc--CCCCCCCCcc-cCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 179 IIGD--LADPIEGGPC-YKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 179 Ii~D--~~~~~~~~p~-~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
|++. ...... .+. ..-....+++. ++++|+|||++++..
T Consensus 134 V~~~g~~l~~~~-~~~~~~~~~~~~l~~-~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 134 VICLGNSFAHLP-DSKGDQSEHRLALKN-IASMVRPGGLLVIDH 175 (293)
T ss_dssp EEECTTCGGGSC-CSSSSSHHHHHHHHH-HHHTEEEEEEEEEEE
T ss_pred EEEcChHHhhcC-ccccCHHHHHHHHHH-HHHHcCCCeEEEEEe
Confidence 9985 222210 000 00113578898 799999999999753
No 183
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.15 E-value=3.2e-11 Score=108.59 Aligned_cols=107 Identities=21% Similarity=0.259 Sum_probs=83.0
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~ 181 (257)
.+.+|||||||+|.++..+++..+..+|+++|+++.+++.+++++..++ .+.+++.+|+.++. .++||+|++
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~-----~~~~~~~~d~~~~~---~~~fD~Iv~ 267 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANG-----VEGEVFASNVFSEV---KGRFDMIIS 267 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTT-----CCCEEEECSTTTTC---CSCEEEEEE
T ss_pred CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhC-----CCCEEEEccccccc---cCCeeEEEE
Confidence 4579999999999999999987554699999999999999999987542 34678899987653 568999999
Q ss_pred cCCCCCCCCcc-cCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 182 DLADPIEGGPC-YKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 182 D~~~~~~~~p~-~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+++-+. +.. ..-....+++. +++.|+|||.+++..
T Consensus 268 ~~~~~~--g~~~~~~~~~~~l~~-~~~~LkpgG~l~i~~ 303 (343)
T 2pjd_A 268 NPPFHD--GMQTSLDAAQTLIRG-AVRHLNSGGELRIVA 303 (343)
T ss_dssp CCCCCS--SSHHHHHHHHHHHHH-HGGGEEEEEEEEEEE
T ss_pred CCCccc--CccCCHHHHHHHHHH-HHHhCCCCcEEEEEE
Confidence 976332 110 01113578998 799999999988754
No 184
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.15 E-value=2.1e-10 Score=92.92 Aligned_cols=121 Identities=13% Similarity=0.117 Sum_probs=81.8
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++++|||+|||+|.++..+++.. +|+++|+++.+++. .++++++.+|+.+.+. .++||+|+
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~-------------~~~~~~~~~d~~~~~~--~~~fD~i~ 83 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES-------------HRGGNLVRADLLCSIN--QESVDVVV 83 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT-------------CSSSCEEECSTTTTBC--GGGCSEEE
T ss_pred CCCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc-------------ccCCeEEECChhhhcc--cCCCCEEE
Confidence 456799999999999999998853 99999999999987 1478999999987443 37899999
Q ss_pred EcCCCCCCCCcc---cCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhh-CCceEE
Q 025141 181 GDLADPIEGGPC---YKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV-FKCGCC 247 (257)
Q Consensus 181 ~D~~~~~~~~p~---~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~-F~~v~~ 247 (257)
++++-.....+. ......++++. +.+.| |||.+++.... ... ...+.+.+++. |..+..
T Consensus 84 ~n~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l-pgG~l~~~~~~---~~~---~~~l~~~l~~~gf~~~~~ 146 (170)
T 3q87_B 84 FNPPYVPDTDDPIIGGGYLGREVIDR-FVDAV-TVGMLYLLVIE---ANR---PKEVLARLEERGYGTRIL 146 (170)
T ss_dssp ECCCCBTTCCCTTTBCCGGGCHHHHH-HHHHC-CSSEEEEEEEG---GGC---HHHHHHHHHHTTCEEEEE
T ss_pred ECCCCccCCccccccCCcchHHHHHH-HHhhC-CCCEEEEEEec---CCC---HHHHHHHHHHCCCcEEEE
Confidence 987632210100 00112456777 56677 99999875421 122 33455556554 544443
No 185
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.15 E-value=9.7e-11 Score=99.84 Aligned_cols=106 Identities=17% Similarity=0.248 Sum_probs=80.5
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
+++.+||+||||+|..+..+++. + .+|+++|+++.+++.|++.+... ..+++++.+|+.+.. ..++||+|+
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~-~-~~v~gvD~s~~~l~~a~~~~~~~-----~~~v~~~~~d~~~~~--~~~~fD~v~ 110 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAER-G-YEVVGLDLHEEMLRVARRKAKER-----NLKIEFLQGDVLEIA--FKNEFDAVT 110 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHT-----TCCCEEEESCGGGCC--CCSCEEEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHHC-C-CeEEEEECCHHHHHHHHHHHHhc-----CCceEEEECChhhcc--cCCCccEEE
Confidence 45689999999999999999986 3 58999999999999999987643 247999999988742 246899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+.........+ -....+++. +++.|+|||++++..
T Consensus 111 ~~~~~~~~~~~---~~~~~~l~~-~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 111 MFFSTIMYFDE---EDLRKLFSK-VAEALKPGGVFITDF 145 (252)
T ss_dssp ECSSGGGGSCH---HHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EcCCchhcCCH---HHHHHHHHH-HHHHcCCCeEEEEec
Confidence 75321110000 113578888 799999999998754
No 186
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.14 E-value=3.3e-10 Score=106.65 Aligned_cols=115 Identities=17% Similarity=0.183 Sum_probs=86.9
Q ss_pred CCCeEEEEeccchHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 102 NPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
++.+|||+|||+|+.+..+++.. +..+|+++|+++..++.+++++...+ -++++++.+|+.++.....+.||+|+
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g----~~nv~~~~~D~~~~~~~~~~~fD~Il 192 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCG----ISNVALTHFDGRVFGAAVPEMFDAIL 192 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHT----CCSEEEECCCSTTHHHHSTTCEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC----CCcEEEEeCCHHHhhhhccccCCEEE
Confidence 56799999999999999988863 34699999999999999999987542 24799999999887543457899999
Q ss_pred EcCCCCCC----CCccc-CCc-----------hHHHHHHHHcCcCCCCcEEEEecCC
Q 025141 181 GDLADPIE----GGPCY-KLY-----------TKSFYEFVVKPRLNPEGIFVTQAGP 221 (257)
Q Consensus 181 ~D~~~~~~----~~p~~-~L~-----------t~ef~~~~~~~~L~pgGil~~~~~~ 221 (257)
+|++-... ..|.. ..+ ..++++. +.+.|||||+++..+.+
T Consensus 193 ~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~-a~~~LkpGG~LvysTcs 248 (479)
T 2frx_A 193 LDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDS-AFHALRPGGTLVYSTCT 248 (479)
T ss_dssp EECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHH-HHHHEEEEEEEEEEESC
T ss_pred ECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHH-HHHhcCCCCEEEEeccc
Confidence 99873210 01110 111 2467887 78999999999976544
No 187
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.14 E-value=6.9e-11 Score=100.45 Aligned_cols=104 Identities=9% Similarity=0.019 Sum_probs=79.3
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcC----CCce
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR----KESY 176 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~----~~~f 176 (257)
.+..+|||||||+|..+..+++... +|++||+++.+++.+++.+. ..+++++.+|+.+.-... ...|
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~~~~~~~~~~~~~~ 125 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENT-------AANISYRLLDGLVPEQAAQIHSEIGD 125 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSC-------CTTEEEEECCTTCHHHHHHHHHHHCS
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCc-------ccCceEEECcccccccccccccccCc
Confidence 4557899999999999999998643 89999999999999998762 348999999987753221 1249
Q ss_pred eEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 177 DvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
|+|++...-... .+ -....+++. ++++|+|||.+++.
T Consensus 126 d~v~~~~~~~~~-~~---~~~~~~l~~-~~~~LkpgG~l~i~ 162 (245)
T 3ggd_A 126 ANIYMRTGFHHI-PV---EKRELLGQS-LRILLGKQGAMYLI 162 (245)
T ss_dssp CEEEEESSSTTS-CG---GGHHHHHHH-HHHHHTTTCEEEEE
T ss_pred cEEEEcchhhcC-CH---HHHHHHHHH-HHHHcCCCCEEEEE
Confidence 999998654331 11 123578898 79999999986654
No 188
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.14 E-value=7e-11 Score=98.18 Aligned_cols=130 Identities=14% Similarity=0.078 Sum_probs=89.5
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
+++.+||+||||+|..+..+++. + .+|+++|+++.+++.+++.+ +++++.+|+.+.- ..++||+|+
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~-~-~~v~~vD~s~~~~~~a~~~~----------~~~~~~~d~~~~~--~~~~fD~v~ 107 (211)
T 3e23_A 42 PAGAKILELGCGAGYQAEAMLAA-G-FDVDATDGSPELAAEASRRL----------GRPVRTMLFHQLD--AIDAYDAVW 107 (211)
T ss_dssp CTTCEEEESSCTTSHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHH----------TSCCEECCGGGCC--CCSCEEEEE
T ss_pred CCCCcEEEECCCCCHHHHHHHHc-C-CeEEEECCCHHHHHHHHHhc----------CCceEEeeeccCC--CCCcEEEEE
Confidence 45689999999999999999986 3 59999999999999999875 3466778876643 568899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCC--------CChHHHHHHHHHHhhh--CCceEEEe
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIF--------SHTEVFSCIYNTLRQV--FKCGCCAL 249 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~--------~~~~~~~~~~~~l~~~--F~~v~~~~ 249 (257)
+...-.. .+ .-....+++. +++.|+|||++++........ ...-....+.+.|++. |..+....
T Consensus 108 ~~~~l~~--~~--~~~~~~~l~~-~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~ 181 (211)
T 3e23_A 108 AHACLLH--VP--RDELADVLKL-IWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVES 181 (211)
T ss_dssp ECSCGGG--SC--HHHHHHHHHH-HHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEE
T ss_pred ecCchhh--cC--HHHHHHHHHH-HHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEEe
Confidence 8753211 01 0012478888 799999999998864221100 0001234555666654 66665543
No 189
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.14 E-value=1.5e-10 Score=95.98 Aligned_cols=98 Identities=18% Similarity=0.186 Sum_probs=76.6
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
+++.+||+||||+|..+..+ +..+++++|+++.+++.+++.+ ++++++.+|+.+. ...+++||+|+
T Consensus 35 ~~~~~vLdiG~G~G~~~~~l----~~~~v~~vD~s~~~~~~a~~~~---------~~~~~~~~d~~~~-~~~~~~fD~v~ 100 (211)
T 2gs9_A 35 PPGESLLEVGAGTGYWLRRL----PYPQKVGVEPSEAMLAVGRRRA---------PEATWVRAWGEAL-PFPGESFDVVL 100 (211)
T ss_dssp CCCSEEEEETCTTCHHHHHC----CCSEEEEECCCHHHHHHHHHHC---------TTSEEECCCTTSC-CSCSSCEEEEE
T ss_pred CCCCeEEEECCCCCHhHHhC----CCCeEEEEeCCHHHHHHHHHhC---------CCcEEEEcccccC-CCCCCcEEEEE
Confidence 36789999999999999887 3348999999999999999875 4678899997653 23356899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+...-.. .+ ....+++. ++++|+|||.+++..
T Consensus 101 ~~~~l~~--~~----~~~~~l~~-~~~~L~pgG~l~i~~ 132 (211)
T 2gs9_A 101 LFTTLEF--VE----DVERVLLE-ARRVLRPGGALVVGV 132 (211)
T ss_dssp EESCTTT--CS----CHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EcChhhh--cC----CHHHHHHH-HHHHcCCCCEEEEEe
Confidence 8754322 11 13578888 799999999998865
No 190
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.14 E-value=1.8e-10 Score=96.84 Aligned_cols=107 Identities=23% Similarity=0.323 Sum_probs=79.5
Q ss_pred CCCCeEEEEeccchHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhhhhccC-CCCCCCeEEEEcchHHHHhcCCCceeE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKE-AFSDPRLELVINDARAELESRKESYDV 178 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~-~~~~~rv~i~~~Da~~~l~~~~~~fDv 178 (257)
.++.+||+||||+|..+..+++.. +..+|+++|+++.+++.+++++...+. .+..++++++.+|+..... ..++||+
T Consensus 76 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~ 154 (226)
T 1i1n_A 76 HEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYA-EEAPYDA 154 (226)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCG-GGCCEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcc-cCCCcCE
Confidence 456799999999999999988763 335999999999999999998764210 0013589999999875422 2467999
Q ss_pred EEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCC
Q 025141 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGP 221 (257)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~ 221 (257)
|+++...+ ++. +. +.+.|+|||++++...+
T Consensus 155 i~~~~~~~-------~~~-----~~-~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 155 IHVGAAAP-------VVP-----QA-LIDQLKPGGRLILPVGP 184 (226)
T ss_dssp EEECSBBS-------SCC-----HH-HHHTEEEEEEEEEEESC
T ss_pred EEECCchH-------HHH-----HH-HHHhcCCCcEEEEEEec
Confidence 99986532 222 45 67899999999987654
No 191
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.13 E-value=2e-10 Score=93.23 Aligned_cols=126 Identities=16% Similarity=0.231 Sum_probs=88.9
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
+++.+||+||||+|..+..+++. + .+++++|+++.+++.+++.+ ++++++.+|+.+. ....++||+|+
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~-~-~~v~~~D~~~~~~~~a~~~~---------~~~~~~~~d~~~~-~~~~~~~D~i~ 112 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQ-G-HDVLGTDLDPILIDYAKQDF---------PEARWVVGDLSVD-QISETDFDLIV 112 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHC---------TTSEEEECCTTTS-CCCCCCEEEEE
T ss_pred cCCCeEEEECCCCCHHHHHHHHC-C-CcEEEEcCCHHHHHHHHHhC---------CCCcEEEcccccC-CCCCCceeEEE
Confidence 56789999999999999999986 3 59999999999999999865 3588999998764 22347899999
Q ss_pred EcCC-CCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhh-CCceEE
Q 025141 181 GDLA-DPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV-FKCGCC 247 (257)
Q Consensus 181 ~D~~-~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~-F~~v~~ 247 (257)
++.. .... .+ -....+++. +++.|+|||++++...... ... ...+.+.+++. |..+..
T Consensus 113 ~~~~~~~~~-~~---~~~~~~l~~-~~~~l~~~G~l~~~~~~~~-~~~---~~~~~~~l~~~Gf~~~~~ 172 (195)
T 3cgg_A 113 SAGNVMGFL-AE---DGREPALAN-IHRALGADGRAVIGFGAGR-GWV---FGDFLEVAERVGLELENA 172 (195)
T ss_dssp ECCCCGGGS-CH---HHHHHHHHH-HHHHEEEEEEEEEEEETTS-SCC---HHHHHHHHHHHTEEEEEE
T ss_pred ECCcHHhhc-Ch---HHHHHHHHH-HHHHhCCCCEEEEEeCCCC-CcC---HHHHHHHHHHcCCEEeee
Confidence 9732 1110 10 012578888 7999999999988653321 112 33455555554 544444
No 192
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.13 E-value=6.2e-11 Score=94.47 Aligned_cols=127 Identities=19% Similarity=0.278 Sum_probs=87.0
Q ss_pred CCCCeEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHH-----h--cC
Q 025141 101 PNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAEL-----E--SR 172 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l-----~--~~ 172 (257)
.++.+||++|||+|..+..+++. .+..+++++|+++ +++ .++++++.+|+.+.- . ..
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~--------------~~~~~~~~~d~~~~~~~~~~~~~~~ 85 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP--------------IVGVDFLQGDFRDELVMKALLERVG 85 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC--------------CTTEEEEESCTTSHHHHHHHHHHHT
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc--------------cCcEEEEEcccccchhhhhhhccCC
Confidence 45679999999999999999886 3346999999998 532 157899999987652 1 23
Q ss_pred CCceeEEEEcCCCCCCCCccc-CC----chHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCceEE
Q 025141 173 KESYDVIIGDLADPIEGGPCY-KL----YTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGCC 247 (257)
Q Consensus 173 ~~~fDvIi~D~~~~~~~~p~~-~L----~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~ 247 (257)
.++||+|+++.+-.+...+.. +. ....+++. +.+.|+|||.+++..... .....+.+.+++.|..+..
T Consensus 86 ~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~L~~gG~l~~~~~~~------~~~~~~~~~~~~~~~~~~~ 158 (180)
T 1ej0_A 86 DSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEM-CRDVLAPGGSFVVKVFQG------EGFDEYLREIRSLFTKVKV 158 (180)
T ss_dssp TCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHH-HHHHEEEEEEEEEEEESS------TTHHHHHHHHHHHEEEEEE
T ss_pred CCceeEEEECCCccccCCCccchHHHHHHHHHHHHH-HHHHcCCCcEEEEEEecC------CcHHHHHHHHHHhhhhEEe
Confidence 468999999876432111100 00 01578888 799999999998864221 1234566667777777665
Q ss_pred Ee
Q 025141 248 AL 249 (257)
Q Consensus 248 ~~ 249 (257)
..
T Consensus 159 ~~ 160 (180)
T 1ej0_A 159 RK 160 (180)
T ss_dssp EC
T ss_pred ec
Confidence 43
No 193
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.13 E-value=7.3e-11 Score=104.41 Aligned_cols=114 Identities=18% Similarity=0.243 Sum_probs=82.3
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccC---CCCCCCeEEEEcchHHHH-----hcC
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKE---AFSDPRLELVINDARAEL-----ESR 172 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~---~~~~~rv~i~~~Da~~~l-----~~~ 172 (257)
+++.+|||||||+|..+..+++.+ ..+++++|+++.+++.|++.+..... .....+++++.+|+.+.. ...
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKGR-INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDP 111 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSST
T ss_pred CCCCEEEEECCCCcHHHHHHHhcC-CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccC
Confidence 367899999999999999988753 57999999999999999998753210 001347999999987752 112
Q ss_pred CCceeEEEEcCCCCCCCCcccCC-chHHHHHHHHcCcCCCCcEEEEec
Q 025141 173 KESYDVIIGDLADPIEGGPCYKL-YTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 173 ~~~fDvIi~D~~~~~~~~p~~~L-~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
.++||+|++...-++. . ..+ ....+++. ++++|+|||++++..
T Consensus 112 ~~~fD~V~~~~~l~~~--~-~~~~~~~~~l~~-~~~~LkpgG~li~~~ 155 (313)
T 3bgv_A 112 QMCFDICSCQFVCHYS--F-ESYEQADMMLRN-ACERLSPGGYFIGTT 155 (313)
T ss_dssp TCCEEEEEEETCGGGG--G-GSHHHHHHHHHH-HHTTEEEEEEEEEEE
T ss_pred CCCEEEEEEecchhhc--c-CCHHHHHHHHHH-HHHHhCCCcEEEEec
Confidence 3589999987543220 0 011 12478898 799999999999864
No 194
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.12 E-value=1.4e-10 Score=102.90 Aligned_cols=114 Identities=10% Similarity=0.100 Sum_probs=75.4
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCC--CCeEEEEcch------HHHHh-c
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSD--PRLELVINDA------RAELE-S 171 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~--~rv~i~~~Da------~~~l~-~ 171 (257)
+.+.+|||||||+|..+..+++. +..+|+++|+++.+++.|++........... .++++++.|. .+... .
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~-~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYG-EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CCCCeEEEEecCCcHhHHHHHhc-CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc
Confidence 34689999999999866655553 3469999999999999999987532100000 1256777776 22211 1
Q ss_pred CCCceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 172 RKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 172 ~~~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
..++||+|++-..-+....+ .+ ...+++. ++++|||||++++..
T Consensus 126 ~~~~FD~V~~~~~lhy~~~~-~~--~~~~l~~-~~r~LkpGG~~i~~~ 169 (302)
T 2vdw_A 126 YFGKFNIIDWQFAIHYSFHP-RH--YATVMNN-LSELTASGGKVLITT 169 (302)
T ss_dssp CSSCEEEEEEESCGGGTCST-TT--HHHHHHH-HHHHEEEEEEEEEEE
T ss_pred cCCCeeEEEECchHHHhCCH-HH--HHHHHHH-HHHHcCCCCEEEEEe
Confidence 34789999876432110011 12 2588999 799999999998754
No 195
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.12 E-value=5.5e-11 Score=97.96 Aligned_cols=126 Identities=19% Similarity=0.213 Sum_probs=85.1
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCC--CcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHH---------
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKT--VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAEL--------- 169 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~--~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l--------- 169 (257)
.+..+|||||||+|.++..+++..+ ..+|+++|+++.. ..++++++.+|+.+..
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~---------------~~~~v~~~~~d~~~~~~~~~~~~~~ 85 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD---------------PIPNVYFIQGEIGKDNMNNIKNINY 85 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC---------------CCTTCEEEECCTTTTSSCCC-----
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC---------------CCCCceEEEccccchhhhhhccccc
Confidence 4567999999999999999998644 4799999999831 1257888888876542
Q ss_pred -------------h--cCCCceeEEEEcCCCCCCCCcc--cCCc----hHHHHHHHHcCcCCCCcEEEEecCCCCCCCCh
Q 025141 170 -------------E--SRKESYDVIIGDLADPIEGGPC--YKLY----TKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHT 228 (257)
Q Consensus 170 -------------~--~~~~~fDvIi~D~~~~~~~~p~--~~L~----t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~ 228 (257)
. -..++||+|++|...++. +.. .+.. ...+++. +.+.|+|||.+++.....
T Consensus 86 i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~-g~~~~d~~~~~~~~~~~l~~-~~~~LkpgG~lv~~~~~~------ 157 (201)
T 2plw_A 86 IDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCI-GNKIDDHLNSCELTLSITHF-MEQYINIGGTYIVKMYLG------ 157 (201)
T ss_dssp ------CHHHHHHHHHHTTCCEEEEEECCCCCCC-SCHHHHHHHHHHHHHHHHHH-HHHHEEEEEEEEEEEECS------
T ss_pred cccccchhhHHHHHhhcCCCcccEEEeCCCcCCC-CCcccCHHHHHHHHHHHHHH-HHHHccCCCEEEEEEeCC------
Confidence 0 124689999999753321 110 0000 1246777 689999999999854221
Q ss_pred HHHHHHHHHHhhhCCceEEEe
Q 025141 229 EVFSCIYNTLRQVFKCGCCAL 249 (257)
Q Consensus 229 ~~~~~~~~~l~~~F~~v~~~~ 249 (257)
.....+...++..|..+..+.
T Consensus 158 ~~~~~l~~~l~~~f~~v~~~~ 178 (201)
T 2plw_A 158 SQTNNLKTYLKGMFQLVHTTK 178 (201)
T ss_dssp TTHHHHHHHHHTTEEEEEECC
T ss_pred CCHHHHHHHHHHHHheEEEEC
Confidence 124566777777787776543
No 196
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.10 E-value=4e-10 Score=103.71 Aligned_cols=110 Identities=11% Similarity=0.065 Sum_probs=79.4
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhh-----ccCCCCCCCeEEEEcchHHHHhcC-CC
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVV-----NKEAFSDPRLELVINDARAELESR-KE 174 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~-----~~~~~~~~rv~i~~~Da~~~l~~~-~~ 174 (257)
.+..+|||||||+|.++..+++..+..+|++||+++.++++|++.... .......++++++.+|+.+.--.. -.
T Consensus 172 ~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~~~ 251 (438)
T 3uwp_A 172 TDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRERIA 251 (438)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCccccccC
Confidence 456899999999999999988765656799999999999999875321 000112368999999987643211 14
Q ss_pred ceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 175 SYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 175 ~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
.||+|+++.+- . .+ -....+++ +.+.|||||++++.
T Consensus 252 ~aDVVf~Nn~~-F--~p----dl~~aL~E-i~RvLKPGGrIVss 287 (438)
T 3uwp_A 252 NTSVIFVNNFA-F--GP----EVDHQLKE-RFANMKEGGRIVSS 287 (438)
T ss_dssp TCSEEEECCTT-C--CH----HHHHHHHH-HHTTSCTTCEEEES
T ss_pred CccEEEEcccc-c--Cc----hHHHHHHH-HHHcCCCCcEEEEe
Confidence 69999997542 1 12 12355677 68999999999874
No 197
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.10 E-value=1.9e-10 Score=96.94 Aligned_cols=101 Identities=13% Similarity=0.231 Sum_probs=77.5
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
+++.+||+||||+|..+..+++.. .+++++|+++.+++.+++.+ ++++++.+|+.+.- ..++||+|+
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~~D~s~~~~~~a~~~~---------~~~~~~~~d~~~~~--~~~~~D~v~ 105 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF--GDTAGLELSEDMLTHARKRL---------PDATLHQGDMRDFR--LGRKFSAVV 105 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH--SEEEEEESCHHHHHHHHHHC---------TTCEEEECCTTTCC--CSSCEEEEE
T ss_pred CCCCeEEEecccCCHHHHHHHHhC--CcEEEEeCCHHHHHHHHHhC---------CCCEEEECCHHHcc--cCCCCcEEE
Confidence 567899999999999999998864 38999999999999999864 46899999987642 257899999
Q ss_pred EcC--CCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 181 GDL--ADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 181 ~D~--~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+.. .... ..+ -....+++. +++.|+|||.+++..
T Consensus 106 ~~~~~~~~~-~~~---~~~~~~l~~-~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 106 SMFSSVGYL-KTT---EELGAAVAS-FAEHLEPGGVVVVEP 141 (239)
T ss_dssp ECTTGGGGC-CSH---HHHHHHHHH-HHHTEEEEEEEEECC
T ss_pred EcCchHhhc-CCH---HHHHHHHHH-HHHhcCCCeEEEEEe
Confidence 532 1111 000 112578888 799999999999863
No 198
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.09 E-value=6.9e-10 Score=103.54 Aligned_cols=116 Identities=16% Similarity=0.167 Sum_probs=85.6
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCC-cEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCC-CceeE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTV-EKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRK-ESYDV 178 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~-~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~-~~fDv 178 (257)
.++.+|||+|||.|+.+..++...+. .+|+++|+++..++.+++++...+ .++++++.+|+.++..... ++||+
T Consensus 258 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g----~~~v~~~~~D~~~~~~~~~~~~fD~ 333 (450)
T 2yxl_A 258 KPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMG----IKIVKPLVKDARKAPEIIGEEVADK 333 (450)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTT----CCSEEEECSCTTCCSSSSCSSCEEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcC----CCcEEEEEcChhhcchhhccCCCCE
Confidence 34579999999999999999886433 699999999999999999986542 3579999999877643222 67999
Q ss_pred EEEcCCCCCC----CCcc-------cCC-----chHHHHHHHHcCcCCCCcEEEEecCC
Q 025141 179 IIGDLADPIE----GGPC-------YKL-----YTKSFYEFVVKPRLNPEGIFVTQAGP 221 (257)
Q Consensus 179 Ii~D~~~~~~----~~p~-------~~L-----~t~ef~~~~~~~~L~pgGil~~~~~~ 221 (257)
|++|++-... ..|. ..+ ...++++. +.+.|+|||.++....+
T Consensus 334 Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~-a~~~LkpGG~lvy~tcs 391 (450)
T 2yxl_A 334 VLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLES-AARLVKPGGRLLYTTCS 391 (450)
T ss_dssp EEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHH-HHTTEEEEEEEEEEESC
T ss_pred EEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHH-HHHhcCCCcEEEEEeCC
Confidence 9999873211 0110 000 01578888 79999999999876543
No 199
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.09 E-value=2.6e-10 Score=95.26 Aligned_cols=110 Identities=13% Similarity=0.038 Sum_probs=75.9
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHH----hhhhhccCCCCCCCeEEEEcchHHHHhcCCCce
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCK----SYLVVNKEAFSDPRLELVINDARAELESRKESY 176 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~----~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~f 176 (257)
.++.+|||||||+|..+..+++..+..+|++||+++.+++.+. +..... ..++++++.+|+.+. ....+.
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~----~~~~v~~~~~d~~~l-~~~~~~- 99 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKG----GLPNLLYLWATAERL-PPLSGV- 99 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGT----CCTTEEEEECCSTTC-CSCCCE-
T ss_pred cCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhc----CCCceEEEecchhhC-CCCCCC-
Confidence 4567999999999999999999765679999999999887533 222222 235899999998873 333344
Q ss_pred eEEEEcCCCCCCCCcccC-CchHHHHHHHHcCcCCCCcEEEEec
Q 025141 177 DVIIGDLADPIEGGPCYK-LYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 177 DvIi~D~~~~~~~~p~~~-L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
|.|++...... ....+ --...+++. ++++|||||++++..
T Consensus 100 d~v~~~~~~~~--~~~~~~~~~~~~l~~-~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 100 GELHVLMPWGS--LLRGVLGSSPEMLRG-MAAVCRPGASFLVAL 140 (218)
T ss_dssp EEEEEESCCHH--HHHHHHTSSSHHHHH-HHHTEEEEEEEEEEE
T ss_pred CEEEEEccchh--hhhhhhccHHHHHHH-HHHHcCCCcEEEEEe
Confidence 87775442100 00000 001478888 799999999998854
No 200
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.08 E-value=4.4e-10 Score=104.36 Aligned_cols=108 Identities=11% Similarity=0.095 Sum_probs=78.4
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHH-------HhhhhhccCCCCCCCeEEEEcchHH---HHh
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFC-------KSYLVVNKEAFSDPRLELVINDARA---ELE 170 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a-------~~~~~~~~~~~~~~rv~i~~~Da~~---~l~ 170 (257)
.++.+|||||||+|.++..+++..+..+|++||+++.+++.| ++++...+ ....+++++.+|+.. .+.
T Consensus 241 ~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~G--l~~~nV~~i~gD~~~~~~~~~ 318 (433)
T 1u2z_A 241 KKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYG--MRLNNVEFSLKKSFVDNNRVA 318 (433)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTT--BCCCCEEEEESSCSTTCHHHH
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcC--CCCCceEEEEcCccccccccc
Confidence 456899999999999999999864456899999999999999 76665332 113689999986542 122
Q ss_pred cCCCceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 171 SRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 171 ~~~~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
...++||+|+++.+- . .+ . -...++. +.+.|+|||.+++.
T Consensus 319 ~~~~~FDvIvvn~~l-~--~~--d--~~~~L~e-l~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 319 ELIPQCDVILVNNFL-F--DE--D--LNKKVEK-ILQTAKVGCKIISL 358 (433)
T ss_dssp HHGGGCSEEEECCTT-C--CH--H--HHHHHHH-HHTTCCTTCEEEES
T ss_pred cccCCCCEEEEeCcc-c--cc--c--HHHHHHH-HHHhCCCCeEEEEe
Confidence 223689999986432 1 11 1 2356778 79999999999875
No 201
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.08 E-value=2.8e-10 Score=94.92 Aligned_cols=99 Identities=19% Similarity=0.166 Sum_probs=76.3
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHH-hcCCCceeEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAEL-ESRKESYDVI 179 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l-~~~~~~fDvI 179 (257)
.++.+||+||||+|..+..+++. + .+++++|+++.+++.+++.+. +++.+|+.++. ....++||+|
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~-~~~~~~D~~~~~~~~~~~~~~-----------~~~~~d~~~~~~~~~~~~fD~v 97 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G-TRVSGIEAFPEAAEQAKEKLD-----------HVVLGDIETMDMPYEEEQFDCV 97 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T-CEEEEEESSHHHHHHHHTTSS-----------EEEESCTTTCCCCSCTTCEEEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHhCC-----------cEEEcchhhcCCCCCCCccCEE
Confidence 46789999999999999999987 4 699999999999999997531 67788876542 2234789999
Q ss_pred EEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
++...-.. .+ -..++++. +++.|+|||.+++..
T Consensus 98 ~~~~~l~~--~~----~~~~~l~~-~~~~L~~gG~l~~~~ 130 (230)
T 3cc8_A 98 IFGDVLEH--LF----DPWAVIEK-VKPYIKQNGVILASI 130 (230)
T ss_dssp EEESCGGG--SS----CHHHHHHH-TGGGEEEEEEEEEEE
T ss_pred EECChhhh--cC----CHHHHHHH-HHHHcCCCCEEEEEe
Confidence 98643211 11 12578898 799999999998864
No 202
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.07 E-value=2.4e-10 Score=103.53 Aligned_cols=109 Identities=12% Similarity=0.075 Sum_probs=81.1
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
..+++|||||||+|..+..+++..+..+++++|+ |.+++.|++++...+ ..+|++++.+|+.+.-...++.||+|+
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~p~~~D~v~ 253 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLS---GSERIHGHGANLLDRDVPFPTGFDAVW 253 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCT---TGGGEEEEECCCCSSSCCCCCCCSEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcC---cccceEEEEccccccCCCCCCCcCEEE
Confidence 4678999999999999999988655579999999 999999999876332 236899999997653001136899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
+...-+. -+ .-....+++. +++.|+|||.+++.
T Consensus 254 ~~~vlh~--~~--~~~~~~~l~~-~~~~L~pgG~l~i~ 286 (363)
T 3dp7_A 254 MSQFLDC--FS--EEEVISILTR-VAQSIGKDSKVYIM 286 (363)
T ss_dssp EESCSTT--SC--HHHHHHHHHH-HHHHCCTTCEEEEE
T ss_pred Eechhhh--CC--HHHHHHHHHH-HHHhcCCCcEEEEE
Confidence 8654221 11 0112467888 79999999988774
No 203
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.07 E-value=1.6e-10 Score=94.70 Aligned_cols=124 Identities=14% Similarity=0.109 Sum_probs=84.4
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCC---------cEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEE-EcchHHHHh
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTV---------EKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELV-INDARAELE 170 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~---------~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~-~~Da~~~l~ 170 (257)
.++.+|||||||+|.++..+++..+. .+|+++|+++.. ..++++++ .+|..+.-.
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~---------------~~~~~~~~~~~d~~~~~~ 85 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF---------------PLEGATFLCPADVTDPRT 85 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC---------------CCTTCEEECSCCTTSHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc---------------cCCCCeEEEeccCCCHHH
Confidence 45689999999999999999987433 689999999831 12467888 888654321
Q ss_pred -------cCCCceeEEEEcCCCCCCCCcccCCch--------HHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHH
Q 025141 171 -------SRKESYDVIIGDLADPIEGGPCYKLYT--------KSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIY 235 (257)
Q Consensus 171 -------~~~~~fDvIi~D~~~~~~~~p~~~L~t--------~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~ 235 (257)
...++||+|++|...... .. +... ..+++. +.+.|+|||.+++..... .....+.
T Consensus 86 ~~~~~~~~~~~~fD~V~~~~~~~~~-~~--~~~~~~~~~~~~~~~l~~-~~~~LkpgG~lv~~~~~~------~~~~~~~ 155 (196)
T 2nyu_A 86 SQRILEVLPGRRADVILSDMAPNAT-GF--RDLDHDRLISLCLTLLSV-TPDILQPGGTFLCKTWAG------SQSRRLQ 155 (196)
T ss_dssp HHHHHHHSGGGCEEEEEECCCCCCC-SC--HHHHHHHHHHHHHHHHHH-HHHHEEEEEEEEEEECCS------GGGHHHH
T ss_pred HHHHHHhcCCCCCcEEEeCCCCCCC-CC--cccCHHHHHHHHHHHHHH-HHHHhcCCCEEEEEecCC------ccHHHHH
Confidence 123579999998742221 10 1111 367888 799999999999874221 2234666
Q ss_pred HHHhhhCCceEEEe
Q 025141 236 NTLRQVFKCGCCAL 249 (257)
Q Consensus 236 ~~l~~~F~~v~~~~ 249 (257)
..++..|..+..+.
T Consensus 156 ~~l~~~f~~v~~~~ 169 (196)
T 2nyu_A 156 RRLTEEFQNVRIIK 169 (196)
T ss_dssp HHHHHHEEEEEEEC
T ss_pred HHHHHHhcceEEEC
Confidence 77777787776654
No 204
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.07 E-value=6.7e-10 Score=97.04 Aligned_cols=108 Identities=16% Similarity=0.115 Sum_probs=80.4
Q ss_pred CCCeEEEEeccc---hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH--H-------
Q 025141 102 NPKTIFIMGGGE---GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE--L------- 169 (257)
Q Consensus 102 ~~~~VL~IG~G~---G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~--l------- 169 (257)
...+|||||||+ |.++..+.+..+..+|++||+||.+++.|++.+.. .++++++.+|+++. +
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~------~~~v~~~~~D~~~~~~~~~~~~~~ 150 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK------DPNTAVFTADVRDPEYILNHPDVR 150 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT------CTTEEEEECCTTCHHHHHHSHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC------CCCeEEEEeeCCCchhhhccchhh
Confidence 457999999999 98877666654447999999999999999998742 36899999998753 1
Q ss_pred hcCC-CceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecC
Q 025141 170 ESRK-ESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (257)
Q Consensus 170 ~~~~-~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~ 220 (257)
...+ .+||+|++...-++ -+ .. ....+++. ++++|+|||.+++...
T Consensus 151 ~~~d~~~~d~v~~~~vlh~--~~-d~-~~~~~l~~-~~~~L~pGG~l~i~~~ 197 (274)
T 2qe6_A 151 RMIDFSRPAAIMLVGMLHY--LS-PD-VVDRVVGA-YRDALAPGSYLFMTSL 197 (274)
T ss_dssp HHCCTTSCCEEEETTTGGG--SC-TT-THHHHHHH-HHHHSCTTCEEEEEEE
T ss_pred ccCCCCCCEEEEEechhhh--CC-cH-HHHHHHHH-HHHhCCCCcEEEEEEe
Confidence 1112 57999998764322 11 01 23578898 7999999999988653
No 205
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.07 E-value=2.5e-09 Score=97.24 Aligned_cols=99 Identities=12% Similarity=0.156 Sum_probs=75.5
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCC--------
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRK-------- 173 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~-------- 173 (257)
.+++|||+|||+|.++..+++. ..+|++||+++.+++.|++++..++ -++++++.+|+.+++....
T Consensus 213 ~~~~vLDl~cG~G~~~l~la~~--~~~V~gvd~~~~ai~~a~~n~~~ng----~~~v~~~~~d~~~~~~~~~~~~~~~~l 286 (369)
T 3bt7_A 213 SKGDLLELYCGNGNFSLALARN--FDRVLATEIAKPSVAAAQYNIAANH----IDNVQIIRMAAEEFTQAMNGVREFNRL 286 (369)
T ss_dssp CCSEEEEESCTTSHHHHHHGGG--SSEEEEECCCHHHHHHHHHHHHHTT----CCSEEEECCCSHHHHHHHSSCCCCTTG
T ss_pred CCCEEEEccCCCCHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcC----CCceEEEECCHHHHHHHHhhccccccc
Confidence 4578999999999999988874 4699999999999999999987663 2589999999999875321
Q ss_pred -------CceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 174 -------ESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 174 -------~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
.+||+|++|++.. + + ..++++ .|+++|.++.-.
T Consensus 287 ~~~~~~~~~fD~Vv~dPPr~---g----~-~~~~~~-----~l~~~g~ivyvs 326 (369)
T 3bt7_A 287 QGIDLKSYQCETIFVDPPRS---G----L-DSETEK-----MVQAYPRILYIS 326 (369)
T ss_dssp GGSCGGGCCEEEEEECCCTT---C----C-CHHHHH-----HHTTSSEEEEEE
T ss_pred cccccccCCCCEEEECcCcc---c----c-HHHHHH-----HHhCCCEEEEEE
Confidence 3799999998642 1 1 234444 344777766544
No 206
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.06 E-value=3.7e-10 Score=98.96 Aligned_cols=110 Identities=11% Similarity=0.100 Sum_probs=73.4
Q ss_pred CCCeEEEEeccchHHHHHH----HhcCCCcEE--EEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHh-----
Q 025141 102 NPKTIFIMGGGEGSTAREI----LRHKTVEKV--VMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELE----- 170 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l----~~~~~~~~v--~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~----- 170 (257)
++.+|||||||+|.++..+ +...+..+| +++|+++++++.|++.+.... ....-++++..+|+.++..
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTS-NLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCS-SCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhcc-CCCcceEEEEecchhhhhhhhccc
Confidence 4569999999999765433 222222444 999999999999999864221 0111234556777766542
Q ss_pred cCCCceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 171 SRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 171 ~~~~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
..+++||+|++...-.+... -..++++ ++++|||||.+++..
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d------~~~~l~~-~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKD------IPATLKF-FHSLLGTNAKMLIIV 172 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSC------HHHHHHH-HHHTEEEEEEEEEEE
T ss_pred cCCCceeEEEEeeeeeecCC------HHHHHHH-HHHHcCCCcEEEEEE
Confidence 13578999998754322111 2468898 799999999998753
No 207
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.06 E-value=7.6e-10 Score=100.44 Aligned_cols=106 Identities=15% Similarity=0.104 Sum_probs=81.1
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.+..+|||||||+|..+..+++..+..+++++|+ |.+++.|++++...+ ..+|++++.+|..+ ..+..||+|+
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~---l~~~v~~~~~d~~~---~~p~~~D~v~ 273 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRG---LADRCEILPGDFFE---TIPDGADVYL 273 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT---CTTTEEEEECCTTT---CCCSSCSEEE
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcC---cCCceEEeccCCCC---CCCCCceEEE
Confidence 4568999999999999999998755579999999 999999999876432 24799999999873 2233899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
+...-+. -+ .-....+++. +++.|+|||.+++.
T Consensus 274 ~~~vlh~--~~--d~~~~~~L~~-~~~~L~pgG~l~i~ 306 (369)
T 3gwz_A 274 IKHVLHD--WD--DDDVVRILRR-IATAMKPDSRLLVI 306 (369)
T ss_dssp EESCGGG--SC--HHHHHHHHHH-HHTTCCTTCEEEEE
T ss_pred hhhhhcc--CC--HHHHHHHHHH-HHHHcCCCCEEEEE
Confidence 8654211 11 0112368898 79999999998875
No 208
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.04 E-value=1.6e-09 Score=100.45 Aligned_cols=115 Identities=19% Similarity=0.219 Sum_probs=85.3
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-CCCceeEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYDVI 179 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~-~~~~fDvI 179 (257)
.++.+|||+|||.|+.+..+++..+..+|+++|+++..++.+++++...+ -+++++.+|+.+.... ..++||+|
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g-----~~~~~~~~D~~~~~~~~~~~~fD~V 319 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLG-----MKATVKQGDGRYPSQWCGEQQFDRI 319 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTT-----CCCEEEECCTTCTHHHHTTCCEEEE
T ss_pred CCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcC-----CCeEEEeCchhhchhhcccCCCCEE
Confidence 44579999999999999999986544799999999999999999987542 2478999999876432 23689999
Q ss_pred EEcCCCCCC----CCccc-------CC-----chHHHHHHHHcCcCCCCcEEEEecCC
Q 025141 180 IGDLADPIE----GGPCY-------KL-----YTKSFYEFVVKPRLNPEGIFVTQAGP 221 (257)
Q Consensus 180 i~D~~~~~~----~~p~~-------~L-----~t~ef~~~~~~~~L~pgGil~~~~~~ 221 (257)
++|++-... ..|.. .+ ...++++. +.+.|+|||+++....+
T Consensus 320 l~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~-a~~~LkpGG~lvystcs 376 (429)
T 1sqg_A 320 LLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDA-IWPHLKTGGTLVYATCS 376 (429)
T ss_dssp EEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHH-HGGGEEEEEEEEEEESC
T ss_pred EEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHH-HHHhcCCCCEEEEEECC
Confidence 999873210 01100 00 11478888 79999999999876543
No 209
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.04 E-value=2.3e-10 Score=98.62 Aligned_cols=97 Identities=16% Similarity=0.124 Sum_probs=74.8
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++.+|||||||+|..+..+++ ++ .+|+++|+++.+++.+++. ++++++.+|+.++ ....++||+|+
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~-~~-~~v~gvD~s~~~~~~a~~~----------~~~~~~~~d~~~~-~~~~~~fD~v~ 99 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALAN-QG-LFVYAVEPSIVMRQQAVVH----------PQVEWFTGYAENL-ALPDKSVDGVI 99 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHT-TT-CEEEEECSCHHHHHSSCCC----------TTEEEECCCTTSC-CSCTTCBSEEE
T ss_pred CCCCEEEEEcCcccHHHHHHHh-CC-CEEEEEeCCHHHHHHHHhc----------cCCEEEECchhhC-CCCCCCEeEEE
Confidence 5678999999999999999998 43 6999999999998877653 2789999998663 33457899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
+...-... + --..+++. +++.|| ||.+++.
T Consensus 100 ~~~~l~~~--~----~~~~~l~~-~~~~Lk-gG~~~~~ 129 (261)
T 3ege_A 100 SILAIHHF--S----HLEKSFQE-MQRIIR-DGTIVLL 129 (261)
T ss_dssp EESCGGGC--S----SHHHHHHH-HHHHBC-SSCEEEE
T ss_pred EcchHhhc--c----CHHHHHHH-HHHHhC-CcEEEEE
Confidence 87642211 1 12578898 799999 9955543
No 210
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.04 E-value=8.2e-10 Score=102.43 Aligned_cols=99 Identities=18% Similarity=0.205 Sum_probs=79.9
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.+.++|||+|||+|.++..+++. ..+|++||+++.+++.|++++..++ -. ++++.+|+.+++.. +||+|+
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~s~~ai~~A~~n~~~ng----l~-v~~~~~d~~~~~~~---~fD~Vv 358 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKR--GFNVKGFDSNEFAIEMARRNVEINN----VD-AEFEVASDREVSVK---GFDTVI 358 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHT----CC-EEEEECCTTTCCCT---TCSEEE
T ss_pred CCCCEEEEeeccchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcC----Cc-EEEEECChHHcCcc---CCCEEE
Confidence 45689999999999999999885 3699999999999999999987653 23 99999999887532 899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+|++.. + ...++++. ++ .|+|+|++++.+
T Consensus 359 ~dPPr~---g-----~~~~~~~~-l~-~l~p~givyvsc 387 (425)
T 2jjq_A 359 VDPPRA---G-----LHPRLVKR-LN-REKPGVIVYVSC 387 (425)
T ss_dssp ECCCTT---C-----SCHHHHHH-HH-HHCCSEEEEEES
T ss_pred EcCCcc---c-----hHHHHHHH-HH-hcCCCcEEEEEC
Confidence 998632 1 12456676 44 599999999865
No 211
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.04 E-value=1.2e-09 Score=99.46 Aligned_cols=112 Identities=11% Similarity=0.065 Sum_probs=80.2
Q ss_pred CCCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025141 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (257)
Q Consensus 100 ~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvI 179 (257)
..++.+|||+|||+|.++.+++......+|+++|+|+.+++.|++++...+ .+++++++.+|+.+.. ...++||+|
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~g---l~~~i~~~~~D~~~~~-~~~~~fD~I 290 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAG---VLDKIKFIQGDATQLS-QYVDSVDFA 290 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTT---CGGGCEEEECCGGGGG-GTCSCEEEE
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcC---CCCceEEEECChhhCC-cccCCcCEE
Confidence 456789999999999999999987543489999999999999999987543 2368999999998864 334789999
Q ss_pred EEcCCCCCCCCcccCC--chHHHHHHHHcCcCCCCcEEEE
Q 025141 180 IGDLADPIEGGPCYKL--YTKSFYEFVVKPRLNPEGIFVT 217 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L--~t~ef~~~~~~~~L~pgGil~~ 217 (257)
++|++-....+....+ .-.++++. ++++| +++.+++
T Consensus 291 i~npPyg~r~~~~~~~~~ly~~~~~~-l~r~l-~g~~~~i 328 (373)
T 3tm4_A 291 ISNLPYGLKIGKKSMIPDLYMKFFNE-LAKVL-EKRGVFI 328 (373)
T ss_dssp EEECCCC------CCHHHHHHHHHHH-HHHHE-EEEEEEE
T ss_pred EECCCCCcccCcchhHHHHHHHHHHH-HHHHc-CCeEEEE
Confidence 9998732211110111 12567787 68888 4333333
No 212
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.04 E-value=3e-10 Score=101.97 Aligned_cols=107 Identities=12% Similarity=0.151 Sum_probs=81.4
Q ss_pred CCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEEEc
Q 025141 103 PKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGD 182 (257)
Q Consensus 103 ~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~D 182 (257)
+++|||||||+|..+..+++..+..+++++|+ |.+++.+++++...+ ..+|++++.+|..+.-...++.||+|++.
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~~D~v~~~ 255 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHD---LGGRVEFFEKNLLDARNFEGGAADVVMLN 255 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTT---CGGGEEEEECCTTCGGGGTTCCEEEEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcC---CCCceEEEeCCcccCcccCCCCccEEEEe
Confidence 78999999999999999998755579999999 999999999876432 24689999999876532134679999986
Q ss_pred CCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 183 LADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 183 ~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
..-+. .+ .-....+++. +++.|+|||.+++.
T Consensus 256 ~vlh~--~~--~~~~~~~l~~-~~~~L~pgG~l~i~ 286 (352)
T 3mcz_A 256 DCLHY--FD--AREAREVIGH-AAGLVKPGGALLIL 286 (352)
T ss_dssp SCGGG--SC--HHHHHHHHHH-HHHTEEEEEEEEEE
T ss_pred ccccc--CC--HHHHHHHHHH-HHHHcCCCCEEEEE
Confidence 43211 01 0012578898 79999999988875
No 213
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.03 E-value=5e-10 Score=99.88 Aligned_cols=106 Identities=9% Similarity=0.041 Sum_probs=80.6
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~ 181 (257)
++.+|||||||+|..+..+++..+..+++++|+ |.+++.|++++...+ ..+|++++.+|..+ ..+..||+|++
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~---~~p~~~D~v~~ 241 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTG---LSGRAQVVVGSFFD---PLPAGAGGYVL 241 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT---CTTTEEEEECCTTS---CCCCSCSEEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcC---cCcCeEEecCCCCC---CCCCCCcEEEE
Confidence 358999999999999999988655579999999 999999999876432 24799999999863 22338999998
Q ss_pred cCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 182 D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
...-+. -+ .-....+++. +++.|+|||.+++..
T Consensus 242 ~~vlh~--~~--~~~~~~~l~~-~~~~L~pgG~l~i~e 274 (332)
T 3i53_A 242 SAVLHD--WD--DLSAVAILRR-CAEAAGSGGVVLVIE 274 (332)
T ss_dssp ESCGGG--SC--HHHHHHHHHH-HHHHHTTTCEEEEEE
T ss_pred ehhhcc--CC--HHHHHHHHHH-HHHhcCCCCEEEEEe
Confidence 653211 11 0012578898 799999999988753
No 214
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.03 E-value=1.1e-09 Score=91.76 Aligned_cols=100 Identities=13% Similarity=0.070 Sum_probs=75.0
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCC-CCCCeEEEEcchHH-------------
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAF-SDPRLELVINDARA------------- 167 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~-~~~rv~i~~~Da~~------------- 167 (257)
++++||++|+| ..+..+++.. ..+|+.||.|++..+.|++++...+ + ...+++++.+|+.+
T Consensus 30 ~a~~VLEiGtG--ySTl~lA~~~-~g~VvtvE~d~~~~~~ar~~l~~~g--~~~~~~I~~~~gda~~~~~wg~p~~~~~~ 104 (202)
T 3cvo_A 30 EAEVILEYGSG--GSTVVAAELP-GKHVTSVESDRAWARMMKAWLAANP--PAEGTEVNIVWTDIGPTGDWGHPVSDAKW 104 (202)
T ss_dssp HCSEEEEESCS--HHHHHHHTST-TCEEEEEESCHHHHHHHHHHHHHSC--CCTTCEEEEEECCCSSBCGGGCBSSSTTG
T ss_pred CCCEEEEECch--HHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHcC--CCCCCceEEEEeCchhhhcccccccchhh
Confidence 67899999984 6777777754 4799999999999999999997543 1 04689999999653
Q ss_pred -----HHh---cC--CCceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 168 -----ELE---SR--KESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 168 -----~l~---~~--~~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
+.. .. .++||+|++|... ..+++.. +.+.|+|||++++.
T Consensus 105 ~~l~~~~~~i~~~~~~~~fDlIfIDg~k-----------~~~~~~~-~l~~l~~GG~Iv~D 153 (202)
T 3cvo_A 105 RSYPDYPLAVWRTEGFRHPDVVLVDGRF-----------RVGCALA-TAFSITRPVTLLFD 153 (202)
T ss_dssp GGTTHHHHGGGGCTTCCCCSEEEECSSS-----------HHHHHHH-HHHHCSSCEEEEET
T ss_pred hhHHHHhhhhhccccCCCCCEEEEeCCC-----------chhHHHH-HHHhcCCCeEEEEe
Confidence 221 12 3689999999631 1255555 46899999999873
No 215
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.03 E-value=6.4e-10 Score=95.90 Aligned_cols=109 Identities=12% Similarity=0.068 Sum_probs=77.2
Q ss_pred CCCCeEEEEeccchHHHHHHHhcC-CCcEEEEEECCHH------HHHHHHhhhhhccCCCCCCCeEEEEcc-hHHH-Hhc
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEE------VVEFCKSYLVVNKEAFSDPRLELVIND-ARAE-LES 171 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~------vi~~a~~~~~~~~~~~~~~rv~i~~~D-a~~~-l~~ 171 (257)
.++++||+||||+|..+..+++.. +..+|+++|+++. +++.|++++...+ ..++++++.+| .+.. +..
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~~~~~ 118 (275)
T 3bkx_A 42 KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGP---LGDRLTVHFNTNLSDDLGPI 118 (275)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTST---TGGGEEEECSCCTTTCCGGG
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcC---CCCceEEEECChhhhccCCC
Confidence 466899999999999999999863 3469999999997 8999999876432 23689999998 2111 111
Q ss_pred CCCceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 172 RKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 172 ~~~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
..++||+|++...-.....+ ..+.+. +++.++|||.+++..
T Consensus 119 ~~~~fD~v~~~~~l~~~~~~------~~~~~~-~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 119 ADQHFDRVVLAHSLWYFASA------NALALL-FKNMAAVCDHVDVAE 159 (275)
T ss_dssp TTCCCSEEEEESCGGGSSCH------HHHHHH-HHHHTTTCSEEEEEE
T ss_pred CCCCEEEEEEccchhhCCCH------HHHHHH-HHHHhCCCCEEEEEE
Confidence 34789999987542211011 235555 577777799988754
No 216
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.03 E-value=1.2e-09 Score=95.51 Aligned_cols=110 Identities=16% Similarity=0.160 Sum_probs=75.2
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEEC-CHHHHHHHHhhhhhccC---CCC---CCCeEEEEcc---h-HHHH
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDI-DEEVVEFCKSYLVVNKE---AFS---DPRLELVIND---A-RAEL 169 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEi-d~~vi~~a~~~~~~~~~---~~~---~~rv~i~~~D---a-~~~l 169 (257)
.++++||+||||+|.++..+++. +..+|+++|+ ++.+++.|+++...+.. .+. .++++++..| . ....
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~-~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 156 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLA-GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQ 156 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHT-TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHH
Confidence 35679999999999999988886 4459999999 99999999999843210 011 1478887433 2 2222
Q ss_pred hc-CCCceeEEEE-cCCCCCCCCcccCCchHHHHHHHHcCcCC---C--CcEEEEec
Q 025141 170 ES-RKESYDVIIG-DLADPIEGGPCYKLYTKSFYEFVVKPRLN---P--EGIFVTQA 219 (257)
Q Consensus 170 ~~-~~~~fDvIi~-D~~~~~~~~p~~~L~t~ef~~~~~~~~L~---p--gGil~~~~ 219 (257)
.. ..++||+|++ |.... + -....+++. +++.|+ | ||++++-.
T Consensus 157 ~~~~~~~fD~Ii~~dvl~~----~---~~~~~ll~~-l~~~Lk~~~p~~gG~l~v~~ 205 (281)
T 3bzb_A 157 RCTGLQRFQVVLLADLLSF----H---QAHDALLRS-VKMLLALPANDPTAVALVTF 205 (281)
T ss_dssp HHHSCSSBSEEEEESCCSC----G---GGHHHHHHH-HHHHBCCTTTCTTCEEEEEE
T ss_pred hhccCCCCCEEEEeCcccC----h---HHHHHHHHH-HHHHhcccCCCCCCEEEEEE
Confidence 11 3578999987 55421 1 113567787 789999 9 99766543
No 217
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.03 E-value=8.9e-10 Score=99.54 Aligned_cols=107 Identities=13% Similarity=0.117 Sum_probs=80.4
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++.+|||||||+|..+..+++..+..+++++|+ +.+++.|++++...+ ..++++++.+|+.+.+ +..||+|+
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~---~~~~D~v~ 253 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAG---LADRVTVAEGDFFKPL---PVTADVVL 253 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT---CTTTEEEEECCTTSCC---SCCEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcC---CCCceEEEeCCCCCcC---CCCCCEEE
Confidence 3568999999999999999998755569999999 999999999876432 2358999999987532 33599999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+...-+. .+ ......+++. +++.|+|||.+++..
T Consensus 254 ~~~vl~~--~~--~~~~~~~l~~-~~~~L~pgG~l~i~e 287 (374)
T 1qzz_A 254 LSFVLLN--WS--DEDALTILRG-CVRALEPGGRLLVLD 287 (374)
T ss_dssp EESCGGG--SC--HHHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred EeccccC--CC--HHHHHHHHHH-HHHhcCCCcEEEEEe
Confidence 8754211 01 0112478898 799999999877643
No 218
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.02 E-value=2.7e-10 Score=107.22 Aligned_cols=106 Identities=16% Similarity=0.161 Sum_probs=79.6
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++++|||||||+|.++..+++. +..+|++||+++ +++.|++.+..++ ..++++++.+|++++ ..+++||+|+
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~-~~~~V~gvD~s~-~l~~A~~~~~~~g---l~~~v~~~~~d~~~~--~~~~~fD~Iv 229 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSNN---LTDRIVVIPGKVEEV--SLPEQVDIII 229 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHT-TCSEEEEEECHH-HHHHHHHHHHHTT---CTTTEEEEESCTTTC--CCSSCEEEEE
T ss_pred cCCCEEEEecCcccHHHHHHHHc-CCCEEEEEEcHH-HHHHHHHHHHHcC---CCCcEEEEECchhhC--ccCCCeEEEE
Confidence 35689999999999999999885 457999999998 8899999876542 246899999998774 2246899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
+++..... .. --..+.+.. +++.|+|||++++.
T Consensus 230 s~~~~~~~-~~---e~~~~~l~~-~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 230 SEPMGYML-FN---ERMLESYLH-AKKYLKPSGNMFPT 262 (480)
T ss_dssp CCCCHHHH-TC---HHHHHHHHH-GGGGEEEEEEEESC
T ss_pred EeCchHhc-Cc---HHHHHHHHH-HHHhcCCCCEEEEE
Confidence 97641100 00 012456677 68999999999854
No 219
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.02 E-value=9.2e-10 Score=94.64 Aligned_cols=99 Identities=17% Similarity=0.270 Sum_probs=76.1
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
+++.+||+||||+|..+..+++. + .+++++|+++.+++.+++... . .++.+|+.+. ....++||+|+
T Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~-~-~~v~gvD~s~~~l~~a~~~~~--------~--~~~~~d~~~~-~~~~~~fD~v~ 119 (260)
T 2avn_A 53 KNPCRVLDLGGGTGKWSLFLQER-G-FEVVLVDPSKEMLEVAREKGV--------K--NVVEAKAEDL-PFPSGAFEAVL 119 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHHTT-T-CEEEEEESCHHHHHHHHHHTC--------S--CEEECCTTSC-CSCTTCEEEEE
T ss_pred CCCCeEEEeCCCcCHHHHHHHHc-C-CeEEEEeCCHHHHHHHHhhcC--------C--CEEECcHHHC-CCCCCCEEEEE
Confidence 46789999999999999999986 3 589999999999999998743 1 2778887653 23357899999
Q ss_pred EcCC-CCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 181 GDLA-DPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 181 ~D~~-~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+... .+. .+ . ...+++. +++.|+|||++++..
T Consensus 120 ~~~~~~~~--~~--~--~~~~l~~-~~~~LkpgG~l~~~~ 152 (260)
T 2avn_A 120 ALGDVLSY--VE--N--KDKAFSE-IRRVLVPDGLLIATV 152 (260)
T ss_dssp ECSSHHHH--CS--C--HHHHHHH-HHHHEEEEEEEEEEE
T ss_pred Ecchhhhc--cc--c--HHHHHHH-HHHHcCCCeEEEEEe
Confidence 8642 111 01 1 4678898 799999999999864
No 220
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.01 E-value=9.7e-11 Score=100.22 Aligned_cols=114 Identities=12% Similarity=0.125 Sum_probs=79.4
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCC-------------------------C
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFS-------------------------D 155 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~-------------------------~ 155 (257)
.++++||+||||+|..+..+++... .+|+++|+++.+++.+++.+......++ .
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 3457999999999999988887532 5899999999999999988753210000 0
Q ss_pred CCe-EEEEcchHHHHhcCC---CceeEEEEcCCCCCCCCcccCC-chHHHHHHHHcCcCCCCcEEEEec
Q 025141 156 PRL-ELVINDARAELESRK---ESYDVIIGDLADPIEGGPCYKL-YTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 156 ~rv-~i~~~Da~~~l~~~~---~~fDvIi~D~~~~~~~~p~~~L-~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
.++ +++..|+.+...... ++||+|++...-.. .+ .++ ....+++. ++++|+|||.+++..
T Consensus 134 ~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~--~~-~~~~~~~~~l~~-~~~~LkpgG~li~~~ 198 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDA--AC-PDLPAYRTALRN-LGSLLKPGGFLVMVD 198 (265)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHH--HC-SSHHHHHHHHHH-HHTTEEEEEEEEEEE
T ss_pred hhheeEEEeeeccCCCCCccccCCccEEEEhhhhhh--hc-CChHHHHHHHHH-HHhhCCCCcEEEEEe
Confidence 127 899999877533223 78999998653110 00 011 13578888 799999999988753
No 221
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.00 E-value=3.8e-09 Score=98.09 Aligned_cols=102 Identities=14% Similarity=0.134 Sum_probs=80.7
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc---CCCcee
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES---RKESYD 177 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~---~~~~fD 177 (257)
.+..+|||+|||+|.++..+++. ..+|+++|+++.+++.|++++..++ -++++++.+|+.+++.. ..++||
T Consensus 285 ~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~~----~~~v~f~~~d~~~~l~~~~~~~~~fD 358 (433)
T 1uwv_A 285 QPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLNG----LQNVTFYHENLEEDVTKQPWAKNGFD 358 (433)
T ss_dssp CTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEECCTTSCCSSSGGGTTCCS
T ss_pred CCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHcC----CCceEEEECCHHHHhhhhhhhcCCCC
Confidence 35679999999999999999986 4699999999999999999987653 34899999999886643 236799
Q ss_pred EEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 178 vIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+|++|++... + .++++. +. .++|++++.+.+
T Consensus 359 ~Vv~dPPr~g-------~--~~~~~~-l~-~~~p~~ivyvsc 389 (433)
T 1uwv_A 359 KVLLDPARAG-------A--AGVMQQ-II-KLEPIRIVYVSC 389 (433)
T ss_dssp EEEECCCTTC-------C--HHHHHH-HH-HHCCSEEEEEES
T ss_pred EEEECCCCcc-------H--HHHHHH-HH-hcCCCeEEEEEC
Confidence 9999986421 1 256666 44 488999888754
No 222
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.99 E-value=2.3e-09 Score=96.59 Aligned_cols=106 Identities=11% Similarity=0.118 Sum_probs=79.8
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++++|||||||+|..+..+++..+..+++++|+ |.+++.|++++...+ ..+|++++.+|+.+. ....+|+|+
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~---~~~~~D~v~ 261 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKG---VADRMRGIAVDIYKE---SYPEADAVL 261 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTT---CTTTEEEEECCTTTS---CCCCCSEEE
T ss_pred CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcC---CCCCEEEEeCccccC---CCCCCCEEE
Confidence 4568999999999999999998755579999999 999999999876432 245799999998764 223459999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
+...-+. .+ .-....+++. +++.|+|||.+++.
T Consensus 262 ~~~vlh~--~~--d~~~~~~l~~-~~~~L~pgG~l~i~ 294 (359)
T 1x19_A 262 FCRILYS--AN--EQLSTIMCKK-AFDAMRSGGRLLIL 294 (359)
T ss_dssp EESCGGG--SC--HHHHHHHHHH-HHTTCCTTCEEEEE
T ss_pred Eechhcc--CC--HHHHHHHHHH-HHHhcCCCCEEEEE
Confidence 8653211 11 0113578898 79999999988654
No 223
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.99 E-value=9.9e-10 Score=95.55 Aligned_cols=105 Identities=10% Similarity=0.045 Sum_probs=72.6
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHH-HHhcCCCceeEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA-ELESRKESYDVI 179 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~-~l~~~~~~fDvI 179 (257)
.++.+|||||||+|.++..+++. + .+|++||+++.+++.|++++... .++....|... ......++||+|
T Consensus 44 ~~g~~VLDlGcGtG~~a~~La~~-g-~~V~gvD~S~~ml~~Ar~~~~~~-------~v~~~~~~~~~~~~~~~~~~fD~V 114 (261)
T 3iv6_A 44 VPGSTVAVIGASTRFLIEKALER-G-ASVTVFDFSQRMCDDLAEALADR-------CVTIDLLDITAEIPKELAGHFDFV 114 (261)
T ss_dssp CTTCEEEEECTTCHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHTSSS-------CCEEEECCTTSCCCGGGTTCCSEE
T ss_pred CCcCEEEEEeCcchHHHHHHHhc-C-CEEEEEECCHHHHHHHHHHHHhc-------cceeeeeecccccccccCCCccEE
Confidence 45689999999999999999986 3 59999999999999999986422 23333333211 001224689999
Q ss_pred EEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecC
Q 025141 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~ 220 (257)
+++..-... .+ . -...+++. +.++| |||++++...
T Consensus 115 v~~~~l~~~-~~-~--~~~~~l~~-l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 115 LNDRLINRF-TT-E--EARRACLG-MLSLV-GSGTVRASVK 149 (261)
T ss_dssp EEESCGGGS-CH-H--HHHHHHHH-HHHHH-TTSEEEEEEE
T ss_pred EEhhhhHhC-CH-H--HHHHHHHH-HHHhC-cCcEEEEEec
Confidence 998542110 11 0 12457888 68899 9999998764
No 224
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.99 E-value=9.2e-10 Score=94.82 Aligned_cols=95 Identities=17% Similarity=0.225 Sum_probs=74.7
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++.+||+||||+|..+..+++..+..+|+++|+++.+++.|++.. ++++++.+|+.+. ....++||+|+
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~---------~~~~~~~~d~~~~-~~~~~~fD~v~ 153 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY---------PQVTFCVASSHRL-PFSDTSMDAII 153 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC---------TTSEEEECCTTSC-SBCTTCEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC---------CCcEEEEcchhhC-CCCCCceeEEE
Confidence 4668999999999999999998643469999999999999999863 4678899997653 23346899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+... + .+++. +.+.|+|||.+++..
T Consensus 154 ~~~~------~-------~~l~~-~~~~L~pgG~l~~~~ 178 (269)
T 1p91_A 154 RIYA------P-------CKAEE-LARVVKPGGWVITAT 178 (269)
T ss_dssp EESC------C-------CCHHH-HHHHEEEEEEEEEEE
T ss_pred EeCC------h-------hhHHH-HHHhcCCCcEEEEEE
Confidence 7432 1 12567 688999999998765
No 225
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.98 E-value=6.9e-10 Score=99.79 Aligned_cols=131 Identities=15% Similarity=0.123 Sum_probs=88.6
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCC-----cEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCce
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTV-----EKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESY 176 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~-----~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~f 176 (257)
++.+|||+|||+|.++..+++..+. .+++++|+|+.++++|+.++...+ .+++++.+|+.... ..++|
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g-----~~~~i~~~D~l~~~--~~~~f 202 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQR-----QKMTLLHQDGLANL--LVDPV 202 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHT-----CCCEEEESCTTSCC--CCCCE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCC-----CCceEEECCCCCcc--ccCCc
Confidence 4579999999999999888875321 589999999999999999887553 26899999986532 34789
Q ss_pred eEEEEcCCCCCCC--------Cc---ccC-CchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhhC
Q 025141 177 DVIIGDLADPIEG--------GP---CYK-LYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVF 242 (257)
Q Consensus 177 DvIi~D~~~~~~~--------~p---~~~-L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~F 242 (257)
|+|+++++-.... .+ ... .....|++. +.+.|+|||++++-.... +........+.+.|.+.+
T Consensus 203 D~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~-~~~~Lk~gG~~~~v~p~~--~~~~~~~~~ir~~l~~~~ 277 (344)
T 2f8l_A 203 DVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQ-GMRYTKPGGYLFFLVPDA--MFGTSDFAKVDKFIKKNG 277 (344)
T ss_dssp EEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHH-HHHTEEEEEEEEEEEEGG--GGGSTTHHHHHHHHHHHE
T ss_pred cEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHH-HHHHhCCCCEEEEEECch--hcCCchHHHHHHHHHhCC
Confidence 9999998721100 00 000 112368888 789999999888765221 222222345555555543
No 226
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.98 E-value=8.5e-10 Score=99.28 Aligned_cols=106 Identities=22% Similarity=0.271 Sum_probs=79.8
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++.+|||||||+|..+..+++..+..+++++|+ +.+++.|++++...+ ..++++++.+|+.+.+ +..||+|+
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~---~~~~D~v~ 254 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEG---LSDRVDVVEGDFFEPL---PRKADAII 254 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTT---CTTTEEEEECCTTSCC---SSCEEEEE
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcC---CCCceEEEeCCCCCCC---CCCccEEE
Confidence 3568999999999999999998655568999999 999999999876432 2358999999986532 34599998
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
+...-+. .+ .-....+++. +++.|+|||.+++.
T Consensus 255 ~~~vl~~--~~--~~~~~~~l~~-~~~~L~pgG~l~i~ 287 (360)
T 1tw3_A 255 LSFVLLN--WP--DHDAVRILTR-CAEALEPGGRILIH 287 (360)
T ss_dssp EESCGGG--SC--HHHHHHHHHH-HHHTEEEEEEEEEE
T ss_pred EcccccC--CC--HHHHHHHHHH-HHHhcCCCcEEEEE
Confidence 8653211 01 0112478998 79999999988764
No 227
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.97 E-value=5.9e-10 Score=99.30 Aligned_cols=102 Identities=19% Similarity=0.218 Sum_probs=79.3
Q ss_pred CeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEEEcC
Q 025141 104 KTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDL 183 (257)
Q Consensus 104 ~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~D~ 183 (257)
++|||||||+|..+..+++..+..+++++|+ |.+++.|++.+...+ ..++++++.+|..+. .++.||+|++..
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~---~~~~~D~v~~~~ 241 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLL---AGERVSLVGGDMLQE---VPSNGDIYLLSR 241 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHH---HTTSEEEEESCTTTC---CCSSCSEEEEES
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcC---CCCcEEEecCCCCCC---CCCCCCEEEEch
Confidence 8999999999999999998655579999999 999999999875332 236899999998762 236799999865
Q ss_pred CCC-CCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 184 ADP-IEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 184 ~~~-~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
.-+ + .+ -....+++. +++.|+|||.+++.
T Consensus 242 vl~~~--~~---~~~~~~l~~-~~~~L~pgG~l~i~ 271 (334)
T 2ip2_A 242 IIGDL--DE---AASLRLLGN-CREAMAGDGRVVVI 271 (334)
T ss_dssp CGGGC--CH---HHHHHHHHH-HHHHSCTTCEEEEE
T ss_pred hccCC--CH---HHHHHHHHH-HHHhcCCCCEEEEE
Confidence 421 2 11 112478888 79999999988875
No 228
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.97 E-value=6.8e-11 Score=102.32 Aligned_cols=114 Identities=14% Similarity=0.112 Sum_probs=74.8
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCC-------------------------CC
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFS-------------------------DP 156 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~-------------------------~~ 156 (257)
++++|||||||+|..+..+++. +..+|+++|+++.+++.|++++......++ ..
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~-~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACD-SFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRA 133 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGG-TEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHh-hhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHh
Confidence 4578999999999877665553 446899999999999999987643211110 01
Q ss_pred CeE-EEEcchHHHHh---cCCCceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 157 RLE-LVINDARAELE---SRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 157 rv~-i~~~Da~~~l~---~~~~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+++ ++.+|..+... ...++||+|++...-... .+.. ---...++. ++++|||||.+++..
T Consensus 134 ~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i-~~~~-~~~~~~l~~-i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 134 AVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECA-CCSL-DAYRAALCN-LASLLKPGGHLVTTV 197 (263)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHH-CSSH-HHHHHHHHH-HHTTEEEEEEEEEEE
T ss_pred hhheEEeccccCCCCCCccccCCCCEeeehHHHHHh-cCCH-HHHHHHHHH-HHHHcCCCcEEEEEE
Confidence 233 78888766321 124689999997542110 0100 001357787 789999999998763
No 229
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.97 E-value=1.9e-10 Score=100.90 Aligned_cols=133 Identities=12% Similarity=-0.039 Sum_probs=86.3
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEE--EcchHHHHhcCCCceeE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELV--INDARAELESRKESYDV 178 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~--~~Da~~~l~~~~~~fDv 178 (257)
.+.++|||||||+|.++..+++. .+|++||+++ ++..+++. +..... ...+++++ .+|++++ .+++||+
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~-m~~~a~~~-~~~~~~-~~~~v~~~~~~~D~~~l---~~~~fD~ 151 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT-LGTSGHEK-PRLVET-FGWNLITFKSKVDVTKM---EPFQADT 151 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC-CCCTTSCC-CCCCCC-TTGGGEEEECSCCGGGC---CCCCCSE
T ss_pred CCCCEEEEeccCCCHHHHHHHHc---CCEEEEECch-hhhhhhhc-hhhhhh-cCCCeEEEeccCcHhhC---CCCCcCE
Confidence 35679999999999999999886 5899999999 43333221 111000 12278999 8998763 2578999
Q ss_pred EEEcCCCCCCCCcc-cCCchHHHHHHHHcCcCCCCc--EEEEecCCCCCCCChHHHHHHHHHHhhhCCceEEE
Q 025141 179 IIGDLADPIEGGPC-YKLYTKSFYEFVVKPRLNPEG--IFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGCCA 248 (257)
Q Consensus 179 Ii~D~~~~~~~~p~-~~L~t~ef~~~~~~~~L~pgG--il~~~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~ 248 (257)
|++|.. .....+. .+.-+..+++. +.+.|+||| .+++..-.|. . ....++++.+++.|..+..+
T Consensus 152 Vvsd~~-~~~~~~~~d~~~~l~~L~~-~~r~LkpGG~~~~v~~~~~~~---~-~~~~~~l~~l~~~f~~v~v~ 218 (276)
T 2wa2_A 152 VLCDIG-ESNPTAAVEASRTLTVLNV-ISRWLEYNQGCGFCVKVLNPY---S-CDVLEALMKMQARFGGGLIR 218 (276)
T ss_dssp EEECCC-CCCSCHHHHHHHHHHHHHH-HHHHHHHSTTCEEEEEESCCC---S-HHHHHHHHHHHHHHCCEEEC
T ss_pred EEECCC-cCCCchhhhHHHHHHHHHH-HHHHhccCCCcEEEEEeCCCC---c-hhHHHHHHHHHHHcCCEEEE
Confidence 999976 2210110 00101236777 789999999 8888653341 2 22345667788888877765
No 230
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.97 E-value=5.9e-10 Score=99.08 Aligned_cols=106 Identities=14% Similarity=0.180 Sum_probs=79.8
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++.+||+||||+|..+..+++..+..+++++|++ .+++.|++.+...+ ..++++++.+|+.+. ..++.||+|+
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~--~~~~~~D~v~ 237 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQG---VASRYHTIAGSAFEV--DYGNDYDLVL 237 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHT---CGGGEEEEESCTTTS--CCCSCEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcC---CCcceEEEecccccC--CCCCCCcEEE
Confidence 45689999999999999999987555699999999 99999999876432 235899999998663 2234599999
Q ss_pred EcCC-CCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 181 GDLA-DPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 181 ~D~~-~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
+... ..+ .. -....+++. +++.|+|||.+++.
T Consensus 238 ~~~~l~~~--~~---~~~~~~l~~-~~~~L~pgG~l~i~ 270 (335)
T 2r3s_A 238 LPNFLHHF--DV---ATCEQLLRK-IKTALAVEGKVIVF 270 (335)
T ss_dssp EESCGGGS--CH---HHHHHHHHH-HHHHEEEEEEEEEE
T ss_pred EcchhccC--CH---HHHHHHHHH-HHHhCCCCcEEEEE
Confidence 8533 211 00 112578888 79999999977664
No 231
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.97 E-value=1.4e-09 Score=96.07 Aligned_cols=99 Identities=13% Similarity=0.051 Sum_probs=70.0
Q ss_pred CCCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEE-cchHHHHh-cCC-Cce
Q 025141 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVI-NDARAELE-SRK-ESY 176 (257)
Q Consensus 100 ~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~-~Da~~~l~-~~~-~~f 176 (257)
..+.++|||||||+|.++..++++ +..+|++||+++.+++.+.+. ++++.... .|++..-. ..+ ..|
T Consensus 83 ~~~g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r~---------~~rv~~~~~~ni~~l~~~~l~~~~f 152 (291)
T 3hp7_A 83 SVEDMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLRQ---------DDRVRSMEQYNFRYAEPVDFTEGLP 152 (291)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHHT---------CTTEEEECSCCGGGCCGGGCTTCCC
T ss_pred CccccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHHh---------CcccceecccCceecchhhCCCCCC
Confidence 345689999999999999999886 457999999999999885442 34554332 34432211 112 349
Q ss_pred eEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 177 DvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
|+|++|..-.. + ..++.. ++++|+|||.+++-
T Consensus 153 D~v~~d~sf~s-------l--~~vL~e-~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 153 SFASIDVSFIS-------L--NLILPA-LAKILVDGGQVVAL 184 (291)
T ss_dssp SEEEECCSSSC-------G--GGTHHH-HHHHSCTTCEEEEE
T ss_pred CEEEEEeeHhh-------H--HHHHHH-HHHHcCcCCEEEEE
Confidence 99999875221 1 456777 79999999988764
No 232
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.95 E-value=1.2e-09 Score=100.15 Aligned_cols=98 Identities=17% Similarity=0.317 Sum_probs=70.1
Q ss_pred CCCCCeEEEEecc------chHHHHHHHh-cCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHH--HHh
Q 025141 100 HPNPKTIFIMGGG------EGSTAREILR-HKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA--ELE 170 (257)
Q Consensus 100 ~~~~~~VL~IG~G------~G~~~~~l~~-~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~--~l~ 170 (257)
..++.+||+|||| +|+.+..+++ +.+..+|++||+++.+. . ..++++++++|+.+ +..
T Consensus 214 ~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~-----~~~rI~fv~GDa~dlpf~~ 280 (419)
T 3sso_A 214 RNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------V-----DELRIRTIQGDQNDAEFLD 280 (419)
T ss_dssp TTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------G-----CBTTEEEEECCTTCHHHHH
T ss_pred cCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------h-----cCCCcEEEEecccccchhh
Confidence 3567899999999 4444444444 43457999999999962 1 24799999999866 331
Q ss_pred ---cCCCceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 171 ---SRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 171 ---~~~~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
...++||+|++|....+ + -...+|++ ++++|||||++++.
T Consensus 281 ~l~~~d~sFDlVisdgsH~~---~----d~~~aL~e-l~rvLKPGGvlVi~ 323 (419)
T 3sso_A 281 RIARRYGPFDIVIDDGSHIN---A----HVRTSFAA-LFPHVRPGGLYVIE 323 (419)
T ss_dssp HHHHHHCCEEEEEECSCCCH---H----HHHHHHHH-HGGGEEEEEEEEEE
T ss_pred hhhcccCCccEEEECCcccc---h----hHHHHHHH-HHHhcCCCeEEEEE
Confidence 12478999999854211 1 12568888 79999999999985
No 233
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.94 E-value=1e-09 Score=97.52 Aligned_cols=129 Identities=12% Similarity=0.041 Sum_probs=84.0
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEEC----CHHHHHHHHhhhhhccCCCCCCCeEEEEc-chHHHHhcCCCc
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDI----DEEVVEFCKSYLVVNKEAFSDPRLELVIN-DARAELESRKES 175 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEi----d~~vi~~a~~~~~~~~~~~~~~rv~i~~~-Da~~~l~~~~~~ 175 (257)
.+.++|||||||+|..+..+++. .+|++||+ ++..++. .... ....++++++.+ |++.. ..++
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~----~~~~--~~~~~~v~~~~~~D~~~l---~~~~ 148 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEP----IPMS--TYGWNLVRLQSGVDVFFI---PPER 148 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCC----CCCC--STTGGGEEEECSCCTTTS---CCCC
T ss_pred CCCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHH----HHhh--hcCCCCeEEEeccccccC---CcCC
Confidence 34579999999999999999986 47999999 4432211 1111 112367999999 87654 2468
Q ss_pred eeEEEEcCCCCCCCCcc-cCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCceEE
Q 025141 176 YDVIIGDLADPIEGGPC-YKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGCC 247 (257)
Q Consensus 176 fDvIi~D~~~~~~~~p~-~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~ 247 (257)
||+|++|..... ..+. .+.-+...++. +.+.|+|||.+++..-.+ .......++..+++.|..+..
T Consensus 149 fD~V~sd~~~~~-g~~~~d~~~~l~~L~~-~~~~LkpGG~~v~kv~~~----~~~~~~~~l~~l~~~f~~v~~ 215 (305)
T 2p41_A 149 CDTLLCDIGESS-PNPTVEAGRTLRVLNL-VENWLSNNTQFCVKVLNP----YMSSVIEKMEALQRKHGGALV 215 (305)
T ss_dssp CSEEEECCCCCC-SSHHHHHHHHHHHHHH-HHHHCCTTCEEEEEESCC----CSHHHHHHHHHHHHHHCCEEE
T ss_pred CCEEEECCcccc-CcchhhHHHHHHHHHH-HHHHhCCCCEEEEEeCCC----CCchHHHHHHHHHHHcCCEEE
Confidence 999999975321 0000 00111246777 689999999999865332 123345677778888877664
No 234
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.94 E-value=1.7e-09 Score=90.50 Aligned_cols=92 Identities=13% Similarity=0.070 Sum_probs=71.8
Q ss_pred CCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEEEc
Q 025141 103 PKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGD 182 (257)
Q Consensus 103 ~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~D 182 (257)
+.+||+||||+|..+..+++. +++|+++.+++.+++. +++++.+|+.+. ....++||+|++.
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~-----------~~~~~~~d~~~~-~~~~~~fD~v~~~ 109 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR-----------GVFVLKGTAENL-PLKDESFDFALMV 109 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT-----------TCEEEECBTTBC-CSCTTCEEEEEEE
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc-----------CCEEEEcccccC-CCCCCCeeEEEEc
Confidence 789999999999999987663 9999999999999975 578888887653 2334689999987
Q ss_pred CCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 183 LADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 183 ~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
..-.. .+ -...+++. +++.|+|||.+++..
T Consensus 110 ~~l~~--~~----~~~~~l~~-~~~~L~pgG~l~i~~ 139 (219)
T 1vlm_A 110 TTICF--VD----DPERALKE-AYRILKKGGYLIVGI 139 (219)
T ss_dssp SCGGG--SS----CHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred chHhh--cc----CHHHHHHH-HHHHcCCCcEEEEEE
Confidence 54211 11 12578888 799999999998764
No 235
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.93 E-value=2.2e-08 Score=89.08 Aligned_cols=115 Identities=14% Similarity=0.039 Sum_probs=81.3
Q ss_pred CCCCeEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcC--CCcee
Q 025141 101 PNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR--KESYD 177 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~--~~~fD 177 (257)
.+..+|||+|||.|+.+..++.. .+..+|+++|+++..++.+++++...+ -.+++++.+|+.++.... ..+||
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g----~~~v~~~~~D~~~~~~~~~~~~~fD 176 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAG----VSCCELAEEDFLAVSPSDPRYHEVH 176 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEECCGGGSCTTCGGGTTEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC----CCeEEEEeCChHhcCccccccCCCC
Confidence 34579999999999999998875 334699999999999999999987542 257999999998764321 15799
Q ss_pred EEEEcCCCCCC----CCcc---------cCC-----chHHHHHHHHcCcCCCCcEEEEecCC
Q 025141 178 VIIGDLADPIE----GGPC---------YKL-----YTKSFYEFVVKPRLNPEGIFVTQAGP 221 (257)
Q Consensus 178 vIi~D~~~~~~----~~p~---------~~L-----~t~ef~~~~~~~~L~pgGil~~~~~~ 221 (257)
.|++|++-... ..|. ..+ ...++++. +.+.|+ ||+++..+.+
T Consensus 177 ~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~-a~~~l~-gG~lvYsTCs 236 (309)
T 2b9e_A 177 YILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCH-ALTFPS-LQRLVYSTCS 236 (309)
T ss_dssp EEEECCCCCC------------------CCHHHHHHHHHHHHHH-HTTCTT-CCEEEEEESC
T ss_pred EEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHH-HHhccC-CCEEEEECCC
Confidence 99999873111 0110 011 12356776 567776 9988865543
No 236
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.93 E-value=6.9e-10 Score=101.75 Aligned_cols=123 Identities=21% Similarity=0.266 Sum_probs=83.1
Q ss_pred CCCCeEEEEeccchHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvI 179 (257)
+++.+|||+|||+|.++..++++. +..+++++|+|+.+++.| ++++++.+|..++. ..++||+|
T Consensus 38 ~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-------------~~~~~~~~D~~~~~--~~~~fD~I 102 (421)
T 2ih2_A 38 PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP-------------PWAEGILADFLLWE--PGEAFDLI 102 (421)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC-------------TTEEEEESCGGGCC--CSSCEEEE
T ss_pred CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC-------------CCCcEEeCChhhcC--ccCCCCEE
Confidence 356799999999999999998752 346999999999998665 47899999988753 24689999
Q ss_pred EEcCCCCCCCC---------ccc-CC-------------chHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHH
Q 025141 180 IGDLADPIEGG---------PCY-KL-------------YTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYN 236 (257)
Q Consensus 180 i~D~~~~~~~~---------p~~-~L-------------~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~ 236 (257)
++++|-..... ... .. ....|++. +.+.|+|||.+++-.... +........+.+
T Consensus 103 i~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~-~~~~Lk~~G~~~~i~p~~--~l~~~~~~~lr~ 179 (421)
T 2ih2_A 103 LGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEK-AVRLLKPGGVLVFVVPAT--WLVLEDFALLRE 179 (421)
T ss_dssp EECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHH-HHHHEEEEEEEEEEEEGG--GGTCGGGHHHHH
T ss_pred EECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHH-HHHHhCCCCEEEEEEChH--HhcCccHHHHHH
Confidence 99986311000 000 00 11367888 789999999888754221 222222344555
Q ss_pred HHhhh
Q 025141 237 TLRQV 241 (257)
Q Consensus 237 ~l~~~ 241 (257)
.+.+.
T Consensus 180 ~l~~~ 184 (421)
T 2ih2_A 180 FLARE 184 (421)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 55544
No 237
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.92 E-value=4.6e-09 Score=103.58 Aligned_cols=108 Identities=20% Similarity=0.192 Sum_probs=80.2
Q ss_pred CCCCeEEEEeccchHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhhhh--ccCCCCCCCeEEEEcchHHHHhcCCCcee
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVV--NKEAFSDPRLELVINDARAELESRKESYD 177 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~--~~~~~~~~rv~i~~~Da~~~l~~~~~~fD 177 (257)
.++.+|||||||+|.++..+++.. +..+|++||+++.+++.|++.+.. +......++++++.+|+.+. ....++||
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dL-p~~d~sFD 798 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEF-DSRLHDVD 798 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSC-CTTSCSCC
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhC-CcccCCee
Confidence 367899999999999999999874 346999999999999999986542 11111346899999998774 33457899
Q ss_pred EEEEcCCCCCCCCcccCCch---HHHHHHHHcCcCCCCcEEEEe
Q 025141 178 VIIGDLADPIEGGPCYKLYT---KSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 178 vIi~D~~~~~~~~p~~~L~t---~ef~~~~~~~~L~pgGil~~~ 218 (257)
+|++...- .++-. ..+++. +.+.|+|| .+++.
T Consensus 799 lVV~~eVL-------eHL~dp~l~~~L~e-I~RvLKPG-~LIIS 833 (950)
T 3htx_A 799 IGTCLEVI-------EHMEEDQACEFGEK-VLSLFHPK-LLIVS 833 (950)
T ss_dssp EEEEESCG-------GGSCHHHHHHHHHH-HHHTTCCS-EEEEE
T ss_pred EEEEeCch-------hhCChHHHHHHHHH-HHHHcCCC-EEEEE
Confidence 99986432 12222 347888 79999999 55543
No 238
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.91 E-value=3.1e-10 Score=98.94 Aligned_cols=134 Identities=12% Similarity=-0.046 Sum_probs=86.0
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEE--EcchHHHHhcCCCceeE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELV--INDARAELESRKESYDV 178 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~--~~Da~~~l~~~~~~fDv 178 (257)
.+..+|||||||+|.++..+++. .+|++||+++ ++..+++. +..... ...++.++ .+|++++ .+++||+
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~-m~~~a~~~-~~~~~~-~~~~v~~~~~~~D~~~l---~~~~fD~ 143 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT-LGVGGHEV-PRITES-YGWNIVKFKSRVDIHTL---PVERTDV 143 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC-CCCSSCCC-CCCCCB-TTGGGEEEECSCCTTTS---CCCCCSE
T ss_pred CCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECch-hhhhhhhh-hhhhhc-cCCCeEEEecccCHhHC---CCCCCcE
Confidence 45679999999999999999886 5899999998 32222211 111000 11278888 8898763 2578999
Q ss_pred EEEcCCCCCCCCcc-cCCchHHHHHHHHcCcCCCCc--EEEEecCCCCCCCChHHHHHHHHHHhhhCCceEEEe
Q 025141 179 IIGDLADPIEGGPC-YKLYTKSFYEFVVKPRLNPEG--IFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGCCAL 249 (257)
Q Consensus 179 Ii~D~~~~~~~~p~-~~L~t~ef~~~~~~~~L~pgG--il~~~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~ 249 (257)
|++|.. .....+. .+.-+..+++. +.+.|+||| .+++..-.|. . ....+++..+++.|..+....
T Consensus 144 V~sd~~-~~~~~~~~d~~~~l~~L~~-~~r~LkpGG~~~fv~kv~~~~---~-~~~~~~l~~l~~~f~~v~~~k 211 (265)
T 2oxt_A 144 IMCDVG-ESSPKWSVESERTIKILEL-LEKWKVKNPSADFVVKVLCPY---S-VEVMERLSVMQRKWGGGLVRN 211 (265)
T ss_dssp EEECCC-CCCSCHHHHHHHHHHHHHH-HHHHHHHCTTCEEEEEESCTT---S-HHHHHHHHHHHHHHCCEEECC
T ss_pred EEEeCc-ccCCccchhHHHHHHHHHH-HHHHhccCCCeEEEEEeCCCC---C-hhHHHHHHHHHHHcCCEEEEE
Confidence 999976 2210110 00111236777 689999999 9988653331 2 223466677788887776654
No 239
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.90 E-value=2.8e-09 Score=92.34 Aligned_cols=141 Identities=18% Similarity=0.077 Sum_probs=96.4
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
+.|.+|||||||.|-++..+....+..+++++|+|+.+++++++++..++ .+.++.+.|... ....++||+|+
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g-----~~~~~~v~D~~~--~~p~~~~DvaL 203 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLN-----VPHRTNVADLLE--DRLDEPADVTL 203 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTT-----CCEEEEECCTTT--SCCCSCCSEEE
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcC-----CCceEEEeeecc--cCCCCCcchHH
Confidence 66899999999999999988887677899999999999999999998653 457888888533 23568899998
Q ss_pred EcCCCCCCCCcccCCch---HHHHHHHHcCcCCCCcEEEEec----CCCCCCCChHHHHHHHHHHhhhCCceEEEeecCc
Q 025141 181 GDLADPIEGGPCYKLYT---KSFYEFVVKPRLNPEGIFVTQA----GPAGIFSHTEVFSCIYNTLRQVFKCGCCALFSSY 253 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t---~ef~~~~~~~~L~pgGil~~~~----~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~~~ 253 (257)
+...-| .|-. ...| . +.+.|+++|+++-.- +.+...........+.+.+++....+.-..+++.
T Consensus 204 ~lkti~-------~Le~q~kg~g~-~-ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~~~~g~~~~~~~~~nE 274 (281)
T 3lcv_B 204 LLKTLP-------CLETQQRGSGW-E-VIDIVNSPNIVVTFPTKSLGQRSKGMFQNYSQSFESQARERSCRIQRLEIGNE 274 (281)
T ss_dssp ETTCHH-------HHHHHSTTHHH-H-HHHHSSCSEEEEEEECC-------CHHHHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred HHHHHH-------HhhhhhhHHHH-H-HHHHhCCCCEEEeccchhhcCCCcchhhHHHHHHHHHHHhcCCceeeeeecCe
Confidence 875421 1111 1344 4 577899999887421 1111011112222333445556777888888887
Q ss_pred cccC
Q 025141 254 SFFC 257 (257)
Q Consensus 254 ~~~~ 257 (257)
.+|+
T Consensus 275 l~y~ 278 (281)
T 3lcv_B 275 LIYV 278 (281)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 7763
No 240
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.88 E-value=1.4e-10 Score=101.31 Aligned_cols=112 Identities=15% Similarity=0.151 Sum_probs=72.9
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCC--------------C------------
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFS--------------D------------ 155 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~--------------~------------ 155 (257)
++.+|||||||+|..+..+.+.. ..+|+++|+++.+++.|++++......+. .
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSH-FEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGG-CSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccC-CCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 56899999999999544333333 35999999999999999986542100000 0
Q ss_pred CCeEEEEcchHHHHh-----cCCCceeEEEEcCCCCCCCCcccCC-chHHHHHHHHcCcCCCCcEEEEe
Q 025141 156 PRLELVINDARAELE-----SRKESYDVIIGDLADPIEGGPCYKL-YTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 156 ~rv~i~~~Da~~~l~-----~~~~~fDvIi~D~~~~~~~~p~~~L-~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
..++++..|+.+.+. ..+++||+|++...-.+. .+ .+ --..+++. ++++|||||.+++.
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~-~~--~~~~~~~~l~~-~~r~LkpGG~l~~~ 214 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAV-SP--DLASFQRALDH-ITTLLRPGGHLLLI 214 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHH-CS--SHHHHHHHHHH-HHTTEEEEEEEEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhh-cC--CHHHHHHHHHH-HHHhcCCCCEEEEE
Confidence 025677778776332 123569999987542110 00 01 12568888 79999999998874
No 241
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.87 E-value=1.2e-08 Score=89.13 Aligned_cols=128 Identities=13% Similarity=0.106 Sum_probs=81.2
Q ss_pred CCCeEEEEeccc--hHHHHHHHh-cCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHH---hcC--C
Q 025141 102 NPKTIFIMGGGE--GSTAREILR-HKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAEL---ESR--K 173 (257)
Q Consensus 102 ~~~~VL~IG~G~--G~~~~~l~~-~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l---~~~--~ 173 (257)
..++|||||||. +..+.++++ ..+..+|++||+||.|++.||+.+... ...+++++.+|.++.- ... .
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~----~~~~~~~v~aD~~~~~~~l~~~~~~ 153 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLAST----PEGRTAYVEADMLDPASILDAPELR 153 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCC----SSSEEEEEECCTTCHHHHHTCHHHH
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccC----CCCcEEEEEecccChhhhhcccccc
Confidence 457999999997 333444443 334579999999999999999987532 1357999999998752 111 2
Q ss_pred Ccee-----EEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHh
Q 025141 174 ESYD-----VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLR 239 (257)
Q Consensus 174 ~~fD-----vIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~ 239 (257)
+.|| .|++...-++. +. .---...++. +.+.|+|||+|++...++. ..+...+.+.+..+
T Consensus 154 ~~~D~~~p~av~~~avLH~l--~d-~~~p~~~l~~-l~~~L~PGG~Lvls~~~~d--~~p~~~~~~~~~~~ 218 (277)
T 3giw_A 154 DTLDLTRPVALTVIAIVHFV--LD-EDDAVGIVRR-LLEPLPSGSYLAMSIGTAE--FAPQEVGRVAREYA 218 (277)
T ss_dssp TTCCTTSCCEEEEESCGGGS--CG-GGCHHHHHHH-HHTTSCTTCEEEEEEECCT--TSHHHHHHHHHHHH
T ss_pred cccCcCCcchHHhhhhHhcC--Cc-hhhHHHHHHH-HHHhCCCCcEEEEEeccCC--CCHHHHHHHHHHHH
Confidence 3455 45555543331 10 1001467888 7999999999998754432 23343444444443
No 242
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.84 E-value=7.7e-09 Score=93.36 Aligned_cols=103 Identities=18% Similarity=0.160 Sum_probs=78.7
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~ 181 (257)
..++|||||||.|..+..+++..+..++++.|+ |.+++.|+++.... ..+|++++.+|.++ .....+|+|++
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~----~~~rv~~~~gD~~~---~~~~~~D~~~~ 250 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQ----EEEQIDFQEGDFFK---DPLPEADLYIL 250 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC------CCSEEEEESCTTT---SCCCCCSEEEE
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhc----ccCceeeecCcccc---CCCCCceEEEe
Confidence 457999999999999999999766678999998 99999999987643 35799999999753 34466899888
Q ss_pred cCC-CCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 182 DLA-DPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 182 D~~-~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
-.. ..| + .-....+++. +++.|+|||.+++.
T Consensus 251 ~~vlh~~---~--d~~~~~iL~~-~~~al~pgg~lli~ 282 (353)
T 4a6d_A 251 ARVLHDW---A--DGKCSHLLER-IYHTCKPGGGILVI 282 (353)
T ss_dssp ESSGGGS---C--HHHHHHHHHH-HHHHCCTTCEEEEE
T ss_pred eeecccC---C--HHHHHHHHHH-HHhhCCCCCEEEEE
Confidence 643 222 1 0113567898 79999999987764
No 243
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.83 E-value=8.7e-09 Score=92.57 Aligned_cols=103 Identities=19% Similarity=0.133 Sum_probs=73.9
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
++..+|||||||+|..+..+++..+..+++++|+ +.++. ++.....+ ..+|++++.+|+.+ ..+ .||+|+
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~---~~~~v~~~~~d~~~---~~p-~~D~v~ 252 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPD---VAGRWKVVEGDFLR---EVP-HADVHV 252 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGG---GTTSEEEEECCTTT---CCC-CCSEEE
T ss_pred cCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccC---CCCCeEEEecCCCC---CCC-CCcEEE
Confidence 4568999999999999999998655678999999 55655 44333221 24689999999863 223 899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
+...-+. .+ ......++++ +++.|||||.+++.
T Consensus 253 ~~~vlh~--~~--d~~~~~~L~~-~~~~LkpgG~l~i~ 285 (348)
T 3lst_A 253 LKRILHN--WG--DEDSVRILTN-CRRVMPAHGRVLVI 285 (348)
T ss_dssp EESCGGG--SC--HHHHHHHHHH-HHHTCCTTCEEEEE
T ss_pred EehhccC--CC--HHHHHHHHHH-HHHhcCCCCEEEEE
Confidence 8654211 11 0112478999 79999999998875
No 244
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.82 E-value=3.8e-09 Score=90.15 Aligned_cols=99 Identities=13% Similarity=0.053 Sum_probs=67.8
Q ss_pred CCCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHh--cCCC-ce
Q 025141 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELE--SRKE-SY 176 (257)
Q Consensus 100 ~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~--~~~~-~f 176 (257)
.+.+++|||||||+|.++..+++. +..+|++||+++.+++.+++.. +++......-..++. .... .|
T Consensus 35 ~~~g~~VLDiGcGtG~~t~~la~~-g~~~V~gvDis~~ml~~a~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~ 104 (232)
T 3opn_A 35 EINGKTCLDIGSSTGGFTDVMLQN-GAKLVYALDVGTNQLAWKIRSD---------ERVVVMEQFNFRNAVLADFEQGRP 104 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSCCCCCHHHHTC---------TTEEEECSCCGGGCCGGGCCSCCC
T ss_pred CCCCCEEEEEccCCCHHHHHHHhc-CCCEEEEEcCCHHHHHHHHHhC---------ccccccccceEEEeCHhHcCcCCC
Confidence 345679999999999999999987 4469999999999999988743 333322211112221 1122 36
Q ss_pred eEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 177 DvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
|.+..|..-. .+ ..+++. ++++|+|||.+++-
T Consensus 105 d~~~~D~v~~-------~l--~~~l~~-i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 105 SFTSIDVSFI-------SL--DLILPP-LYEILEKNGEVAAL 136 (232)
T ss_dssp SEEEECCSSS-------CG--GGTHHH-HHHHSCTTCEEEEE
T ss_pred CEEEEEEEhh-------hH--HHHHHH-HHHhccCCCEEEEE
Confidence 7777775421 11 456788 79999999988874
No 245
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.82 E-value=8.7e-09 Score=90.88 Aligned_cols=120 Identities=17% Similarity=0.269 Sum_probs=78.1
Q ss_pred CCCCeEEEEec------cchHHHHHHHh-cCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEE-EEcchHHHHhcC
Q 025141 101 PNPKTIFIMGG------GEGSTAREILR-HKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLEL-VINDARAELESR 172 (257)
Q Consensus 101 ~~~~~VL~IG~------G~G~~~~~l~~-~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i-~~~Da~~~l~~~ 172 (257)
++..+|||||| |.|+ ..+++ .++..+|++||+++. . +++++ +.+|+.+.- .
T Consensus 62 ~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v---------~~v~~~i~gD~~~~~--~ 120 (290)
T 2xyq_A 62 PYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------V---------SDADSTLIGDCATVH--T 120 (290)
T ss_dssp CTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------B---------CSSSEEEESCGGGCC--C
T ss_pred CCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------C---------CCCEEEEECccccCC--c
Confidence 45679999999 4476 33333 333469999999998 1 26788 999987642 2
Q ss_pred CCceeEEEEcCCCCCC-----CCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhh-CCceE
Q 025141 173 KESYDVIIGDLADPIE-----GGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV-FKCGC 246 (257)
Q Consensus 173 ~~~fDvIi~D~~~~~~-----~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~-F~~v~ 246 (257)
.++||+|++|...+.. ......-+-.+.++. +++.|+|||.+++..-.. .. ..++.+.+++. |..+.
T Consensus 121 ~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~-a~r~LkpGG~~v~~~~~~---~~---~~~l~~~l~~~GF~~v~ 193 (290)
T 2xyq_A 121 ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGF-IKQKLALGGSIAVKITEH---SW---NADLYKLMGHFSWWTAF 193 (290)
T ss_dssp SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHH-HHHHEEEEEEEEEEECSS---SC---CHHHHHHHTTEEEEEEE
T ss_pred cCcccEEEEcCCccccccccccccchHHHHHHHHHH-HHHhcCCCcEEEEEEecc---CC---HHHHHHHHHHcCCcEEE
Confidence 3689999999753221 000001112467888 799999999999854211 11 23666777877 87776
Q ss_pred EE
Q 025141 247 CA 248 (257)
Q Consensus 247 ~~ 248 (257)
..
T Consensus 194 ~~ 195 (290)
T 2xyq_A 194 VT 195 (290)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 246
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.81 E-value=2.2e-09 Score=98.53 Aligned_cols=103 Identities=18% Similarity=0.212 Sum_probs=73.0
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.+..+|||||||+|.++..+++. + .+|+++|+++.+++.|++. ... ....+...+..+.+....++||+|+
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~-g-~~v~gvD~s~~~~~~a~~~-~~~------~~~~~~~~~~~~~l~~~~~~fD~I~ 176 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEA-G-VRHLGFEPSSGVAAKAREK-GIR------VRTDFFEKATADDVRRTEGPANVIY 176 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHT-T-CEEEEECCCHHHHHHHHTT-TCC------EECSCCSHHHHHHHHHHHCCEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHc-C-CcEEEECCCHHHHHHHHHc-CCC------cceeeechhhHhhcccCCCCEEEEE
Confidence 35679999999999999999986 3 4999999999999999986 111 1111222232333333457899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+...-.. -+ --..+++. ++++|+|||++++..
T Consensus 177 ~~~vl~h--~~----d~~~~l~~-~~r~LkpgG~l~i~~ 208 (416)
T 4e2x_A 177 AANTLCH--IP----YVQSVLEG-VDALLAPDGVFVFED 208 (416)
T ss_dssp EESCGGG--CT----THHHHHHH-HHHHEEEEEEEEEEE
T ss_pred ECChHHh--cC----CHHHHHHH-HHHHcCCCeEEEEEe
Confidence 8754211 11 13578999 799999999999864
No 247
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.81 E-value=3.4e-09 Score=91.91 Aligned_cols=79 Identities=11% Similarity=0.077 Sum_probs=65.2
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCH-------HHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCC-
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDE-------EVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRK- 173 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~-------~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~- 173 (257)
+..+|||+|||+|..+..+++. + .+|+++|+++ ..++.|+++...++ ...+++++.+|+.+++....
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~-g-~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~---~~~ri~~~~~d~~~~l~~~~~ 157 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASL-G-LTVTAFEQHPAVACLLSDGIRRALLNPETQD---TAARINLHFGNAAEQMPALVK 157 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHT-T-CCEEEEECCHHHHHHHHHHHHHHHHSHHHHH---HHTTEEEEESCHHHHHHHHHH
T ss_pred CcCeEEEeeCccCHHHHHHHHh-C-CEEEEEECChhhhHHHHHHHHHHHhHHHhhC---CccCeEEEECCHHHHHHhhhc
Confidence 4579999999999999999985 3 5899999999 99999998876542 12479999999999876432
Q ss_pred --CceeEEEEcCCC
Q 025141 174 --ESYDVIIGDLAD 185 (257)
Q Consensus 174 --~~fDvIi~D~~~ 185 (257)
++||+|++|++-
T Consensus 158 ~~~~fD~V~~dP~~ 171 (258)
T 2r6z_A 158 TQGKPDIVYLDPMY 171 (258)
T ss_dssp HHCCCSEEEECCCC
T ss_pred cCCCccEEEECCCC
Confidence 689999999864
No 248
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.80 E-value=7.7e-09 Score=88.70 Aligned_cols=141 Identities=14% Similarity=0.101 Sum_probs=93.1
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
+.|.+|||||||.|-++..+. +..+++++|||+.+++.+++++... .+++++.+.|...- ..+++||+|+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~-----g~~~~~~v~D~~~~--~~~~~~DvvL 173 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREK-----DWDFTFALQDVLCA--PPAEAGDLAL 173 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHT-----TCEEEEEECCTTTS--CCCCBCSEEE
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhc-----CCCceEEEeecccC--CCCCCcchHH
Confidence 678999999999999998776 4579999999999999999998765 36889999996432 3457999997
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec----CCCCCCCChHHHHHHHHHHhhhCCceEEEeecCcccc
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA----GPAGIFSHTEVFSCIYNTLRQVFKCGCCALFSSYSFF 256 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~----~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~~~~~~ 256 (257)
+...-|.. .+......+ . +.+.|+++|+++-.- +.+...........+.+.+++-+..+.-+.+++..||
T Consensus 174 llk~lh~L----E~q~~~~~~-~-ll~aL~~~~vvVsfPtksl~Gr~~gm~~~Y~~~~e~~~~~~~~~~~~~~~~nEl~~ 247 (253)
T 3frh_A 174 IFKLLPLL----EREQAGSAM-A-LLQSLNTPRMAVSFPTRSLGGRGKGMEANYAAWFEGGLPAEFEIEDKKTIGTELIY 247 (253)
T ss_dssp EESCHHHH----HHHSTTHHH-H-HHHHCBCSEEEEEEECC-----------CHHHHHHHHSCTTEEEEEEEEETTEEEE
T ss_pred HHHHHHHh----hhhchhhHH-H-HHHHhcCCCEEEEcChHHhcCCCcchhhHHHHHHHHHhhccchhhhheecCceEEE
Confidence 76431110 011112334 3 456899999887421 1111011122233444555666778888888888877
Q ss_pred C
Q 025141 257 C 257 (257)
Q Consensus 257 ~ 257 (257)
+
T Consensus 248 ~ 248 (253)
T 3frh_A 248 L 248 (253)
T ss_dssp E
T ss_pred E
Confidence 4
No 249
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.79 E-value=4.2e-09 Score=97.05 Aligned_cols=79 Identities=13% Similarity=0.136 Sum_probs=65.8
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcC-CCceeEEE
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR-KESYDVII 180 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~-~~~fDvIi 180 (257)
..++|||+|||+|..+..+++. . .+|++||+|+.+++.|++++.....+ -.+++++++|+.+++... .++||+|+
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~-g-~~V~~VD~s~~~l~~Ar~N~~~~~~g--l~~i~~i~~Da~~~L~~~~~~~fDvV~ 168 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK-A-SQGIYIERNDETAVAARHNIPLLLNE--GKDVNILTGDFKEYLPLIKTFHPDYIY 168 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT-C-SEEEEEESCHHHHHHHHHHHHHHSCT--TCEEEEEESCGGGSHHHHHHHCCSEEE
T ss_pred CCCEEEEeCCCchHHHHHHHhc-C-CEEEEEECCHHHHHHHHHhHHHhccC--CCcEEEEECcHHHhhhhccCCCceEEE
Confidence 3689999999999999998875 3 69999999999999999998754101 158999999999987642 35799999
Q ss_pred EcCC
Q 025141 181 GDLA 184 (257)
Q Consensus 181 ~D~~ 184 (257)
+|++
T Consensus 169 lDPP 172 (410)
T 3ll7_A 169 VDPA 172 (410)
T ss_dssp ECCE
T ss_pred ECCC
Confidence 9997
No 250
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.78 E-value=1.5e-08 Score=88.88 Aligned_cols=76 Identities=18% Similarity=0.378 Sum_probs=62.1
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++.+||+||||+|.++..+++.. .+|++||+|+.+++.+++.+...+ ..++++++.+|+.+. .-..||+|+
T Consensus 27 ~~~~~VLDiG~G~G~lt~~L~~~~--~~v~~vD~~~~~~~~a~~~~~~~~---~~~~v~~~~~D~~~~---~~~~fD~vv 98 (285)
T 1zq9_A 27 RPTDVVLEVGPGTGNMTVKLLEKA--KKVVACELDPRLVAELHKRVQGTP---VASKLQVLVGDVLKT---DLPFFDTCV 98 (285)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTST---TGGGEEEEESCTTTS---CCCCCSEEE
T ss_pred CCCCEEEEEcCcccHHHHHHHhhC--CEEEEEECCHHHHHHHHHHHHhcC---CCCceEEEEcceecc---cchhhcEEE
Confidence 456799999999999999999863 599999999999999999875321 125899999998764 224799999
Q ss_pred EcCC
Q 025141 181 GDLA 184 (257)
Q Consensus 181 ~D~~ 184 (257)
++++
T Consensus 99 ~nlp 102 (285)
T 1zq9_A 99 ANLP 102 (285)
T ss_dssp EECC
T ss_pred EecC
Confidence 9875
No 251
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.78 E-value=4.3e-08 Score=89.97 Aligned_cols=111 Identities=11% Similarity=0.047 Sum_probs=76.3
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCC--------------------------------------CcEEEEEECCHHHHHHH
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKT--------------------------------------VEKVVMCDIDEEVVEFC 142 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~--------------------------------------~~~v~~VEid~~vi~~a 142 (257)
.....|||.+||+|+++.+++.... ..+|+++|+|+.+++.|
T Consensus 200 ~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~A 279 (393)
T 3k0b_A 200 HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIA 279 (393)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHH
Confidence 3457899999999999988876421 13699999999999999
Q ss_pred HhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCC--CcEEEEec
Q 025141 143 KSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNP--EGIFVTQA 219 (257)
Q Consensus 143 ~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~p--gGil~~~~ 219 (257)
++++...+ .+.+++++.+|+.+... .++||+|++|+|-....+. .-...++|+. +.+.|++ ||.+.+-+
T Consensus 280 r~Na~~~g---l~~~I~~~~~D~~~~~~--~~~fD~Iv~NPPYg~rl~~--~~~l~~ly~~-lg~~lk~~~g~~~~iit 350 (393)
T 3k0b_A 280 KQNAVEAG---LGDLITFRQLQVADFQT--EDEYGVVVANPPYGERLED--EEAVRQLYRE-MGIVYKRMPTWSVYVLT 350 (393)
T ss_dssp HHHHHHTT---CTTCSEEEECCGGGCCC--CCCSCEEEECCCCCCSHHH--HHHHHHHHHH-HHHHHHTCTTCEEEEEE
T ss_pred HHHHHHcC---CCCceEEEECChHhCCC--CCCCCEEEECCCCccccCC--chhHHHHHHH-HHHHHhcCCCCEEEEEE
Confidence 99987553 23579999999988642 3689999999874321110 0011245554 3444443 77666644
No 252
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.77 E-value=6.3e-09 Score=96.81 Aligned_cols=113 Identities=14% Similarity=0.052 Sum_probs=79.7
Q ss_pred CCCeEEEEeccchHHHHHHHhcC-------------CCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH
Q 025141 102 NPKTIFIMGGGEGSTAREILRHK-------------TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE 168 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~-------------~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~ 168 (257)
...+|||.|||+|+++..+.++- ...+++++|+|+.++++|+.++.+.+ ....+.+++++|+...
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g--~~~~~~~i~~gD~l~~ 248 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHG--IGTDRSPIVCEDSLEK 248 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTT--CCSSCCSEEECCTTTS
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhC--CCcCCCCEeeCCCCCC
Confidence 34689999999999998877641 12579999999999999999876553 1112678999997654
Q ss_pred HhcCCCceeEEEEcCCCCCCCCcccC-----------CchHHHHHHHHcCcCCCCcEEEEec
Q 025141 169 LESRKESYDVIIGDLADPIEGGPCYK-----------LYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 169 l~~~~~~fDvIi~D~~~~~~~~p~~~-----------L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
. ..++||+|+.++|-......... -....|++. +.+.|+|||.+++-.
T Consensus 249 ~--~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~-~~~~Lk~gG~~a~V~ 307 (445)
T 2okc_A 249 E--PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQH-MMLMLKTGGRAAVVL 307 (445)
T ss_dssp C--CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred c--ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHH-HHHHhccCCEEEEEE
Confidence 2 23589999999873211000000 012478998 689999999887643
No 253
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.76 E-value=3.3e-08 Score=87.58 Aligned_cols=79 Identities=29% Similarity=0.347 Sum_probs=64.8
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH---HhcCC-Cce
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE---LESRK-ESY 176 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~---l~~~~-~~f 176 (257)
.+..+|||+|||+|+.+..+++..+..+|+++|+|+.+++.|++++...+ ++++++++|+.+. +.... .+|
T Consensus 25 ~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g-----~~v~~v~~d~~~l~~~l~~~g~~~~ 99 (301)
T 1m6y_A 25 EDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS-----DRVSLFKVSYREADFLLKTLGIEKV 99 (301)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT-----TTEEEEECCGGGHHHHHHHTTCSCE
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC-----CcEEEEECCHHHHHHHHHhcCCCCC
Confidence 35579999999999999999987445799999999999999999886542 5899999998764 22222 579
Q ss_pred eEEEEcCC
Q 025141 177 DVIIGDLA 184 (257)
Q Consensus 177 DvIi~D~~ 184 (257)
|.|++|++
T Consensus 100 D~Vl~D~g 107 (301)
T 1m6y_A 100 DGILMDLG 107 (301)
T ss_dssp EEEEEECS
T ss_pred CEEEEcCc
Confidence 99999985
No 254
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.76 E-value=2.2e-08 Score=96.04 Aligned_cols=77 Identities=17% Similarity=0.306 Sum_probs=64.7
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-CCCceeEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYDVI 179 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~-~~~~fDvI 179 (257)
.+|.+|||||||+|.++..+++. + .+||+||+++..++.|+.+....+ .-+++++++|+.+.... .+++||+|
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~-g-a~V~giD~~~~~i~~a~~~a~~~~----~~~~~~~~~~~~~~~~~~~~~~fD~v 138 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASK-G-ATIVGIDFQQENINVCRALAEENP----DFAAEFRVGRIEEVIAALEEGEFDLA 138 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHTST----TSEEEEEECCHHHHHHHCCTTSCSEE
T ss_pred CCCCeEEEECCCCcHHHHHHHhC-C-CEEEEECCCHHHHHHHHHHHHhcC----CCceEEEECCHHHHhhhccCCCccEE
Confidence 46789999999999999999996 4 589999999999999999876431 24789999999998765 45789999
Q ss_pred EEcC
Q 025141 180 IGDL 183 (257)
Q Consensus 180 i~D~ 183 (257)
++--
T Consensus 139 ~~~e 142 (569)
T 4azs_A 139 IGLS 142 (569)
T ss_dssp EEES
T ss_pred EECc
Confidence 8753
No 255
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.74 E-value=2.2e-08 Score=88.55 Aligned_cols=75 Identities=17% Similarity=0.344 Sum_probs=62.3
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.+..+||+||||+|.++..+++. ..+|++||+|+.+++.+++.+.. .++++++.+|+.++- -....||+|+
T Consensus 49 ~~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~~------~~~v~vi~gD~l~~~-~~~~~fD~Iv 119 (295)
T 3gru_A 49 TKDDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKEL------YNNIEIIWGDALKVD-LNKLDFNKVV 119 (295)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHHH------CSSEEEEESCTTTSC-GGGSCCSEEE
T ss_pred CCcCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhcc------CCCeEEEECchhhCC-cccCCccEEE
Confidence 35679999999999999999986 36999999999999999998762 368999999997742 1224699999
Q ss_pred EcCC
Q 025141 181 GDLA 184 (257)
Q Consensus 181 ~D~~ 184 (257)
.+++
T Consensus 120 ~NlP 123 (295)
T 3gru_A 120 ANLP 123 (295)
T ss_dssp EECC
T ss_pred EeCc
Confidence 8865
No 256
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.73 E-value=7.2e-09 Score=93.96 Aligned_cols=98 Identities=20% Similarity=0.196 Sum_probs=73.9
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
+++.+|||||||+|..+..+++..+..+++++|+ |.+++.++++ ++++++.+|+.+. .+. ||+|+
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----------~~v~~~~~d~~~~---~~~-~D~v~ 272 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL----------SGIEHVGGDMFAS---VPQ-GDAMI 272 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC----------TTEEEEECCTTTC---CCC-EEEEE
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc----------CCCEEEeCCcccC---CCC-CCEEE
Confidence 4568999999999999999998755568999999 9998876641 5799999998762 223 99999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
+...-+. .+ ......+++. +++.|+|||.+++.
T Consensus 273 ~~~~lh~--~~--d~~~~~~l~~-~~~~L~pgG~l~i~ 305 (372)
T 1fp1_D 273 LKAVCHN--WS--DEKCIEFLSN-CHKALSPNGKVIIV 305 (372)
T ss_dssp EESSGGG--SC--HHHHHHHHHH-HHHHEEEEEEEEEE
T ss_pred Eeccccc--CC--HHHHHHHHHH-HHHhcCCCCEEEEE
Confidence 8654221 11 0112378898 79999999988865
No 257
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.73 E-value=3.1e-08 Score=90.64 Aligned_cols=111 Identities=12% Similarity=-0.028 Sum_probs=77.9
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCC--------------------------------------cEEEEEECCHHHHHHH
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTV--------------------------------------EKVVMCDIDEEVVEFC 142 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~--------------------------------------~~v~~VEid~~vi~~a 142 (257)
.....+||.+||+|+++.+++..... .+|+++|+|+.+++.|
T Consensus 193 ~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~A 272 (384)
T 3ldg_A 193 FPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIA 272 (384)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHH
Confidence 34578999999999999888763211 3699999999999999
Q ss_pred HhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCC--CcEEEEec
Q 025141 143 KSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNP--EGIFVTQA 219 (257)
Q Consensus 143 ~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~p--gGil~~~~ 219 (257)
+++....+ ...+++++.+|+.++.. .++||+|++|+|-....+. .--..++|+. +.+.|++ ||.+.+-+
T Consensus 273 r~Na~~~g---l~~~I~~~~~D~~~l~~--~~~fD~Iv~NPPYG~rl~~--~~~l~~ly~~-lg~~lk~~~g~~~~iit 343 (384)
T 3ldg_A 273 RKNAREVG---LEDVVKLKQMRLQDFKT--NKINGVLISNPPYGERLLD--DKAVDILYNE-MGETFAPLKTWSQFILT 343 (384)
T ss_dssp HHHHHHTT---CTTTEEEEECCGGGCCC--CCCSCEEEECCCCTTTTSC--HHHHHHHHHH-HHHHHTTCTTSEEEEEE
T ss_pred HHHHHHcC---CCCceEEEECChHHCCc--cCCcCEEEECCchhhccCC--HHHHHHHHHH-HHHHHhhCCCcEEEEEE
Confidence 99987553 24579999999988642 3589999999874332111 0112345555 4444444 88776654
No 258
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.73 E-value=3.2e-08 Score=85.67 Aligned_cols=75 Identities=20% Similarity=0.388 Sum_probs=61.1
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH-HhcC--CCcee
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE-LESR--KESYD 177 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~-l~~~--~~~fD 177 (257)
.+..+||+||||+|.++..+++.. .+|++||+|+++++.+++.+.. .++++++.+|+.++ +... .++||
T Consensus 28 ~~~~~VLEIG~G~G~lt~~La~~~--~~V~avEid~~~~~~~~~~~~~------~~~v~~i~~D~~~~~~~~~~~~~~~~ 99 (255)
T 3tqs_A 28 QKTDTLVEIGPGRGALTDYLLTEC--DNLALVEIDRDLVAFLQKKYNQ------QKNITIYQNDALQFDFSSVKTDKPLR 99 (255)
T ss_dssp CTTCEEEEECCTTTTTHHHHTTTS--SEEEEEECCHHHHHHHHHHHTT------CTTEEEEESCTTTCCGGGSCCSSCEE
T ss_pred CCcCEEEEEcccccHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHhh------CCCcEEEEcchHhCCHHHhccCCCeE
Confidence 456789999999999999999863 6999999999999999998753 36899999999886 3322 35788
Q ss_pred EEEEcCC
Q 025141 178 VIIGDLA 184 (257)
Q Consensus 178 vIi~D~~ 184 (257)
|+.+++
T Consensus 100 -vv~NlP 105 (255)
T 3tqs_A 100 -VVGNLP 105 (255)
T ss_dssp -EEEECC
T ss_pred -EEecCC
Confidence 777754
No 259
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=98.72 E-value=4.9e-08 Score=86.46 Aligned_cols=124 Identities=20% Similarity=0.316 Sum_probs=80.7
Q ss_pred CCeEEEEeccchHHHHHHH----hcCCCcEE--EEEECCHH---------HHHHHHhhhhhccCCCCCCC--eEEEEcch
Q 025141 103 PKTIFIMGGGEGSTAREIL----RHKTVEKV--VMCDIDEE---------VVEFCKSYLVVNKEAFSDPR--LELVINDA 165 (257)
Q Consensus 103 ~~~VL~IG~G~G~~~~~l~----~~~~~~~v--~~VEid~~---------vi~~a~~~~~~~~~~~~~~r--v~i~~~Da 165 (257)
.-+||++|.|+|....... +..+..++ +.+|.+|. ..++.+..+... ..+..++ ++++.+|+
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~-p~~~~~~v~L~l~~GDa 175 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERV-PEYEGERLSLKVLLGDA 175 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHC-SEEECSSEEEEEEESCH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhC-ccccCCcEEEEEEechH
Confidence 4579999999998653322 22333455 45554321 112222221110 0112344 46789999
Q ss_pred HHHHhcCC-CceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhh
Q 025141 166 RAELESRK-ESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV 241 (257)
Q Consensus 166 ~~~l~~~~-~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~ 241 (257)
++.+.... .++|+|+.|+|.|.. .| .||+.++|+. ++++++|||++++.+. .. .+.+.|+++
T Consensus 176 ~~~l~~l~~~~~Da~flDgFsP~k-NP--eLWs~e~f~~-l~~~~~pgg~laTYta-------ag---~VRR~L~~a 238 (308)
T 3vyw_A 176 RKRIKEVENFKADAVFHDAFSPYK-NP--ELWTLDFLSL-IKERIDEKGYWVSYSS-------SL---SVRKSLLTL 238 (308)
T ss_dssp HHHGGGCCSCCEEEEEECCSCTTT-SG--GGGSHHHHHH-HHTTEEEEEEEEESCC-------CH---HHHHHHHHT
T ss_pred HHHHhhhcccceeEEEeCCCCccc-Cc--ccCCHHHHHH-HHHHhCCCcEEEEEeC-------cH---HHHHHHHHC
Confidence 99998754 489999999998763 44 7999999999 8999999999998642 22 445667766
No 260
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.72 E-value=1.6e-08 Score=91.73 Aligned_cols=97 Identities=16% Similarity=0.124 Sum_probs=72.5
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~ 181 (257)
...+|||||||+|..+..+++..+..+++++|+ |.+++.+++ .++++++.+|+.+.+ ++. |+|++
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~d~~~~~---p~~-D~v~~ 267 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA----------FSGVEHLGGDMFDGV---PKG-DAIFI 267 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----------CTTEEEEECCTTTCC---CCC-SEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh----------cCCCEEEecCCCCCC---CCC-CEEEE
Confidence 458999999999999999998655679999999 988877653 268999999987522 233 99988
Q ss_pred cCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 182 D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
...-+. .+ .-....+++. +++.|+|||.+++.
T Consensus 268 ~~vlh~--~~--~~~~~~~l~~-~~~~L~pgG~l~i~ 299 (368)
T 3reo_A 268 KWICHD--WS--DEHCLKLLKN-CYAALPDHGKVIVA 299 (368)
T ss_dssp ESCGGG--BC--HHHHHHHHHH-HHHHSCTTCEEEEE
T ss_pred echhhc--CC--HHHHHHHHHH-HHHHcCCCCEEEEE
Confidence 654221 01 0112467898 79999999988775
No 261
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.72 E-value=1.8e-08 Score=96.13 Aligned_cols=151 Identities=13% Similarity=0.034 Sum_probs=96.3
Q ss_pred CCCCCeEEEEeccchHHHHHHHhcCC---------------CcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcc
Q 025141 100 HPNPKTIFIMGGGEGSTAREILRHKT---------------VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVIND 164 (257)
Q Consensus 100 ~~~~~~VL~IG~G~G~~~~~l~~~~~---------------~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~D 164 (257)
.+.+.+|||.+||+|+++..+.++-. ..++.++|+|+.++++|+.++.+.+ .+.++.++.+|
T Consensus 242 ~p~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g---i~~~i~i~~gD 318 (544)
T 3khk_A 242 EPYKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRG---IDFNFGKKNAD 318 (544)
T ss_dssp CCCSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTT---CCCBCCSSSCC
T ss_pred hcCCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhC---CCcccceeccc
Confidence 34556999999999999877654210 2589999999999999999887653 12345557888
Q ss_pred hHHHHhcCCCceeEEEEcCCCC---CCC--------------------CcccCCchHHHHHHHHcCcCCCCcEEEEecCC
Q 025141 165 ARAELESRKESYDVIIGDLADP---IEG--------------------GPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGP 221 (257)
Q Consensus 165 a~~~l~~~~~~fDvIi~D~~~~---~~~--------------------~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~ 221 (257)
....-.....+||+|+.+||-. +.. .|...-....|++. +.+.|+|||.+++-...
T Consensus 319 tL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~-~l~~Lk~gGr~aiVlP~ 397 (544)
T 3khk_A 319 SFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLH-MLYHLAPTGSMALLLAN 397 (544)
T ss_dssp TTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHH-HHHTEEEEEEEEEEEET
T ss_pred hhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHH-HHHHhccCceEEEEecc
Confidence 6543222347899999999732 110 01011112368898 68999999987764311
Q ss_pred CCCCCCh-HHHHHHHHHHhhhCCceEEEeecCccc
Q 025141 222 AGIFSHT-EVFSCIYNTLRQVFKCGCCALFSSYSF 255 (257)
Q Consensus 222 ~~~~~~~-~~~~~~~~~l~~~F~~v~~~~~~~~~~ 255 (257)
++.... .....+.+.|-+.+.-..++..++-.|
T Consensus 398 -g~L~~~~~~~~~iRk~Lle~~~l~aII~LP~~lF 431 (544)
T 3khk_A 398 -GSMSSNTNNEGEIRKTLVEQDLVECMVALPGQLF 431 (544)
T ss_dssp -HHHHCCGGGHHHHHHHHHHTTCEEEEEECCTTBC
T ss_pred -hhhhcCcchHHHHHHHHHhCCcHhEEEECCCCCC
Confidence 111111 234566666766666556666655444
No 262
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.71 E-value=1.5e-08 Score=92.82 Aligned_cols=111 Identities=16% Similarity=0.121 Sum_probs=76.8
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCC--------------------------------------CcEEEEEECCHHHHHHH
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKT--------------------------------------VEKVVMCDIDEEVVEFC 142 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~--------------------------------------~~~v~~VEid~~vi~~a 142 (257)
....+|||++||+|+++.+++.... ..+|+++|+|+.+++.|
T Consensus 194 ~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~A 273 (385)
T 3ldu_A 194 KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIA 273 (385)
T ss_dssp CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHH
Confidence 3457899999999999988876411 14799999999999999
Q ss_pred HhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCC--CcEEEEec
Q 025141 143 KSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNP--EGIFVTQA 219 (257)
Q Consensus 143 ~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~p--gGil~~~~ 219 (257)
++++..++ .+.++++..+|+.++.. +++||+|++|++-....+. .-...++|+. +.+.|++ |+.+.+-+
T Consensus 274 r~Na~~~g---l~~~i~~~~~D~~~l~~--~~~~D~Iv~NPPyg~rl~~--~~~l~~ly~~-lg~~lk~~~g~~~~iit 344 (385)
T 3ldu_A 274 RENAEIAG---VDEYIEFNVGDATQFKS--EDEFGFIITNPPYGERLED--KDSVKQLYKE-LGYAFRKLKNWSYYLIT 344 (385)
T ss_dssp HHHHHHHT---CGGGEEEEECCGGGCCC--SCBSCEEEECCCCCCSHHH--HHHHHHHHHH-HHHHHHTSBSCEEEEEE
T ss_pred HHHHHHcC---CCCceEEEECChhhcCc--CCCCcEEEECCCCcCccCC--HHHHHHHHHH-HHHHHhhCCCCEEEEEE
Confidence 99987653 23589999999988643 4689999999874321110 0011345555 4444544 66665544
No 263
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.70 E-value=2.9e-08 Score=86.84 Aligned_cols=113 Identities=16% Similarity=0.159 Sum_probs=73.7
Q ss_pred CCCeEEEEeccchH----HHHHHHhc-CC---CcEEEEEECCHHHHHHHHhhhh-hcc----------------CCCCC-
Q 025141 102 NPKTIFIMGGGEGS----TAREILRH-KT---VEKVVMCDIDEEVVEFCKSYLV-VNK----------------EAFSD- 155 (257)
Q Consensus 102 ~~~~VL~IG~G~G~----~~~~l~~~-~~---~~~v~~VEid~~vi~~a~~~~~-~~~----------------~~~~~- 155 (257)
++.+||++|||+|. ++..++.. +. ..+|+++|||+.+++.|++..- ... ....+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 55555543 21 2489999999999999998641 000 00001
Q ss_pred ---------CCeEEEEcchHHHHhcCCCceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 156 ---------PRLELVINDARAELESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 156 ---------~rv~i~~~Da~~~l~~~~~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
.++++...|..+.--...++||+|++-..-.. ..+ -.....++. +++.|+|||.+++..
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliy-f~~---~~~~~vl~~-~~~~L~pgG~L~lg~ 252 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIY-FDK---TTQEDILRR-FVPLLKPDGLLFAGH 252 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGG-SCH---HHHHHHHHH-HGGGEEEEEEEEECT
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHh-CCH---HHHHHHHHH-HHHHhCCCcEEEEEe
Confidence 37899999976620011368999999432100 011 112577888 799999999999853
No 264
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.70 E-value=1.4e-08 Score=91.34 Aligned_cols=98 Identities=19% Similarity=0.126 Sum_probs=73.4
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
++..+|||||||+|..+..+++..+..+++++|+ |.+++.|+++ ++++++.+|+.+. . ..||+|+
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----------~~v~~~~~d~~~~---~-p~~D~v~ 251 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS----------NNLTYVGGDMFTS---I-PNADAVL 251 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB----------TTEEEEECCTTTC---C-CCCSEEE
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC----------CCcEEEeccccCC---C-CCccEEE
Confidence 3568999999999999999998654569999999 9998887652 4599999998652 2 2499999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCC---CcEEEEe
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNP---EGIFVTQ 218 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~p---gGil~~~ 218 (257)
+...-+. .+ ......+++. +++.|+| ||.+++.
T Consensus 252 ~~~~lh~--~~--d~~~~~~l~~-~~~~L~p~~~gG~l~i~ 287 (352)
T 1fp2_A 252 LKYILHN--WT--DKDCLRILKK-CKEAVTNDGKRGKVTII 287 (352)
T ss_dssp EESCGGG--SC--HHHHHHHHHH-HHHHHSGGGCCCEEEEE
T ss_pred eehhhcc--CC--HHHHHHHHHH-HHHhCCCCCCCcEEEEE
Confidence 8654221 11 0112378898 7999999 9988765
No 265
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.70 E-value=2.2e-08 Score=90.73 Aligned_cols=97 Identities=22% Similarity=0.139 Sum_probs=72.6
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~ 181 (257)
...+|||||||+|..+..+++..+..+++++|+ |.+++.+++ .++++++.+|+.+- . ++. |+|++
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~D~~~~--~-p~~-D~v~~ 265 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ----------FPGVTHVGGDMFKE--V-PSG-DTILM 265 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----------CTTEEEEECCTTTC--C-CCC-SEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh----------cCCeEEEeCCcCCC--C-CCC-CEEEe
Confidence 468999999999999999998655579999999 888877653 26899999998762 2 233 99988
Q ss_pred cCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 182 D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
...-+. .+. -....+++. +++.|+|||.+++.
T Consensus 266 ~~vlh~--~~d--~~~~~~L~~-~~~~L~pgG~l~i~ 297 (364)
T 3p9c_A 266 KWILHD--WSD--QHCATLLKN-CYDALPAHGKVVLV 297 (364)
T ss_dssp ESCGGG--SCH--HHHHHHHHH-HHHHSCTTCEEEEE
T ss_pred hHHhcc--CCH--HHHHHHHHH-HHHHcCCCCEEEEE
Confidence 654221 010 112468898 79999999988875
No 266
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.69 E-value=9.8e-08 Score=81.76 Aligned_cols=75 Identities=21% Similarity=0.358 Sum_probs=59.1
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.+..+|||||||+|.++..+++.. .+|++||+|+.+++.+++++.. .++++++.+|+.++--.....| .|+
T Consensus 29 ~~~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~------~~~v~~~~~D~~~~~~~~~~~~-~vv 99 (244)
T 1qam_A 29 NEHDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTENKLVD------HDNFQVLNKDILQFKFPKNQSY-KIF 99 (244)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHTTT------CCSEEEECCCGGGCCCCSSCCC-EEE
T ss_pred CCCCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHHHhhcc------CCCeEEEEChHHhCCcccCCCe-EEE
Confidence 356799999999999999999864 6999999999999999998752 2689999999877532212345 566
Q ss_pred EcCC
Q 025141 181 GDLA 184 (257)
Q Consensus 181 ~D~~ 184 (257)
.+++
T Consensus 100 ~nlP 103 (244)
T 1qam_A 100 GNIP 103 (244)
T ss_dssp EECC
T ss_pred EeCC
Confidence 6654
No 267
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.68 E-value=5.4e-08 Score=85.11 Aligned_cols=122 Identities=12% Similarity=0.128 Sum_probs=93.4
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc---CCCceeE
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES---RKESYDV 178 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~---~~~~fDv 178 (257)
++..+|++-+|+|.++.++++ .. .+++.||+++...+..++++.. +++++++..|+...++. ..++||+
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS-~~-d~~vfvE~~~~a~~~L~~Nl~~------~~~~~V~~~D~~~~L~~l~~~~~~fdL 162 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLR-SQ-DRLYLCELHPTEYNFLLKLPHF------NKKVYVNHTDGVSKLNALLPPPEKRGL 162 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSC-TT-SEEEEECCSHHHHHHHTTSCCT------TSCEEEECSCHHHHHHHHCSCTTSCEE
T ss_pred cCCCceeEeCCcHHHHHHHcC-CC-CeEEEEeCCHHHHHHHHHHhCc------CCcEEEEeCcHHHHHHHhcCCCCCccE
Confidence 466899999999999999998 43 7999999999999999998863 46899999999999874 3457999
Q ss_pred EEEcCCCCCCCCcccCCc--hHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhhC
Q 025141 179 IIGDLADPIEGGPCYKLY--TKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVF 242 (257)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~--t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~F 242 (257)
|++||+-.. . ..+ ..+.+.+ ...+.|+|+++++- | ....+....+.+.|++.-
T Consensus 163 VfiDPPYe~---k--~~~~~vl~~L~~--~~~r~~~Gi~v~WY--P--i~~~~~~~~~~~~l~~~~ 217 (283)
T 2oo3_A 163 IFIDPSYER---K--EEYKEIPYAIKN--AYSKFSTGLYCVWY--P--VVNKAWTEQFLRKMREIS 217 (283)
T ss_dssp EEECCCCCS---T--THHHHHHHHHHH--HHHHCTTSEEEEEE--E--ESSHHHHHHHHHHHHHHC
T ss_pred EEECCCCCC---C--cHHHHHHHHHHH--hCccCCCeEEEEEE--e--ccchHHHHHHHHHHHhcC
Confidence 999986321 1 122 1233333 34788999999985 3 345666778888887543
No 268
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.68 E-value=2.3e-08 Score=86.73 Aligned_cols=81 Identities=17% Similarity=0.126 Sum_probs=64.9
Q ss_pred CeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhcc--CCCCC---CCeEEEEcchHHHHhcCCCceeE
Q 025141 104 KTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNK--EAFSD---PRLELVINDARAELESRKESYDV 178 (257)
Q Consensus 104 ~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~--~~~~~---~rv~i~~~Da~~~l~~~~~~fDv 178 (257)
.+|||+|||.|..+..+++. + .+|++||+++.+.+++++.+.... ...+. .|++++.+|+.++++...++||+
T Consensus 90 ~~VLDl~~G~G~dal~lA~~-g-~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fDv 167 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASV-G-CRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQV 167 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHH-T-CCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCSE
T ss_pred CEEEEcCCcCCHHHHHHHHc-C-CEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCCE
Confidence 79999999999999999986 3 479999999999888887764211 01111 58999999999998765568999
Q ss_pred EEEcCCCC
Q 025141 179 IIGDLADP 186 (257)
Q Consensus 179 Ii~D~~~~ 186 (257)
|++|++-+
T Consensus 168 V~lDP~y~ 175 (258)
T 2oyr_A 168 VYLDPMFP 175 (258)
T ss_dssp EEECCCCC
T ss_pred EEEcCCCC
Confidence 99998644
No 269
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.67 E-value=1.3e-07 Score=90.18 Aligned_cols=150 Identities=11% Similarity=0.040 Sum_probs=98.4
Q ss_pred CCCeEEEEeccchHHHHHHHhc---CCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH--HhcCCCce
Q 025141 102 NPKTIFIMGGGEGSTAREILRH---KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE--LESRKESY 176 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~---~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~--l~~~~~~f 176 (257)
...+|||.+||+|+++..+.++ .+..++.++|+|+.+.++|+.++.+.+ ...++.+++.+|.+.. -.....+|
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g--i~~~~~~I~~gDtL~~d~p~~~~~~f 298 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHG--VPIENQFLHNADTLDEDWPTQEPTNF 298 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTT--CCGGGEEEEESCTTTSCSCCSSCCCB
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcC--CCcCccceEecceecccccccccccc
Confidence 4569999999999998877765 234689999999999999999876653 1225789999997653 12234789
Q ss_pred eEEEEcCCCC--CCCCc---------------ccCCchHHHHHHHHcCcCC-CCcEEEEecCCCCCCCChHHHHHHHHHH
Q 025141 177 DVIIGDLADP--IEGGP---------------CYKLYTKSFYEFVVKPRLN-PEGIFVTQAGPAGIFSHTEVFSCIYNTL 238 (257)
Q Consensus 177 DvIi~D~~~~--~~~~p---------------~~~L~t~ef~~~~~~~~L~-pgGil~~~~~~~~~~~~~~~~~~~~~~l 238 (257)
|+|+.+||-. +.... +..-....|++. +.+.|+ |||++++-... ++.........+.+.|
T Consensus 299 D~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~-~l~~Lk~~gGr~a~VlP~-g~Lf~~~~~~~iRk~L 376 (542)
T 3lkd_A 299 DGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLH-GYYHLKQDNGVMAIVLPH-GVLFRGNAEGTIRKAL 376 (542)
T ss_dssp SEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHH-HHHTBCTTTCEEEEEEET-HHHHCCTHHHHHHHHH
T ss_pred cEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHH-HHHHhCCCceeEEEEecc-hHhhCCchhHHHHHHH
Confidence 9999999731 11000 000012358898 689999 99988764311 1111122345566667
Q ss_pred hhhCCceEEEeecCccc
Q 025141 239 RQVFKCGCCALFSSYSF 255 (257)
Q Consensus 239 ~~~F~~v~~~~~~~~~~ 255 (257)
-+.+.-..++..++-.|
T Consensus 377 le~~~l~~II~LP~~lF 393 (542)
T 3lkd_A 377 LEEGAIDTVIGLPANIF 393 (542)
T ss_dssp HHTTCEEEEEECCSSCS
T ss_pred HhCCceeEEEEcccccc
Confidence 66666555666655444
No 270
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.67 E-value=2.2e-08 Score=83.16 Aligned_cols=109 Identities=19% Similarity=0.219 Sum_probs=73.6
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++.+||+||||+|..+..+. .+++++|+++. +++++.+|+.+ +....++||+|+
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~-------------------~~~~~~~d~~~-~~~~~~~fD~v~ 120 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR-----NPVHCFDLASL-------------------DPRVTVCDMAQ-VPLEDESVDVAV 120 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS-------------------STTEEESCTTS-CSCCTTCEEEEE
T ss_pred CCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC-------------------CceEEEecccc-CCCCCCCEeEEE
Confidence 456899999999999988762 48999999987 34567777665 223356899999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhh-CCceE
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV-FKCGC 246 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~-F~~v~ 246 (257)
+...-+. --...+++. +++.|+|||.+++...... +.. ...+.+.+++. |..+.
T Consensus 121 ~~~~l~~-------~~~~~~l~~-~~~~L~~gG~l~i~~~~~~-~~~---~~~~~~~l~~~Gf~~~~ 175 (215)
T 2zfu_A 121 FCLSLMG-------TNIRDFLEE-ANRVLKPGGLLKVAEVSSR-FED---VRTFLRAVTKLGFKIVS 175 (215)
T ss_dssp EESCCCS-------SCHHHHHHH-HHHHEEEEEEEEEEECGGG-CSC---HHHHHHHHHHTTEEEEE
T ss_pred Eehhccc-------cCHHHHHHH-HHHhCCCCeEEEEEEcCCC-CCC---HHHHHHHHHHCCCEEEE
Confidence 8754321 113578888 7999999999887532111 122 23455556554 54444
No 271
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.65 E-value=4.1e-08 Score=85.76 Aligned_cols=73 Identities=19% Similarity=0.241 Sum_probs=60.6
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~ 181 (257)
+. +||+||||+|.++..+++.. .+|++||+|+++++.+++.+. +.+++++++|+.++--.....+|.|+.
T Consensus 47 ~~-~VLEIG~G~G~lt~~L~~~~--~~V~avEid~~~~~~l~~~~~-------~~~v~vi~~D~l~~~~~~~~~~~~iv~ 116 (271)
T 3fut_A 47 TG-PVFEVGPGLGALTRALLEAG--AEVTAIEKDLRLRPVLEETLS-------GLPVRLVFQDALLYPWEEVPQGSLLVA 116 (271)
T ss_dssp CS-CEEEECCTTSHHHHHHHHTT--CCEEEEESCGGGHHHHHHHTT-------TSSEEEEESCGGGSCGGGSCTTEEEEE
T ss_pred CC-eEEEEeCchHHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcC-------CCCEEEEECChhhCChhhccCccEEEe
Confidence 34 99999999999999999963 689999999999999998764 258999999998763222236899999
Q ss_pred cCC
Q 025141 182 DLA 184 (257)
Q Consensus 182 D~~ 184 (257)
+++
T Consensus 117 NlP 119 (271)
T 3fut_A 117 NLP 119 (271)
T ss_dssp EEC
T ss_pred cCc
Confidence 975
No 272
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.64 E-value=3.7e-08 Score=93.91 Aligned_cols=153 Identities=8% Similarity=-0.019 Sum_probs=94.5
Q ss_pred CCCeEEEEeccchHHHHHHHhcC---C---------------CcEEEEEECCHHHHHHHHhhhhhccCCC-CCCCeEEEE
Q 025141 102 NPKTIFIMGGGEGSTAREILRHK---T---------------VEKVVMCDIDEEVVEFCKSYLVVNKEAF-SDPRLELVI 162 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~---~---------------~~~v~~VEid~~vi~~a~~~~~~~~~~~-~~~rv~i~~ 162 (257)
...+|||.+||+|+++..+.++- . ..+++++|+|+.++++|+.++.+.+... .+.+.++++
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~ 248 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRL 248 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEE
T ss_pred CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEe
Confidence 35699999999999987776531 0 1379999999999999999876543100 001378999
Q ss_pred cchHHHHhcCCCceeEEEEcCCCCCCCCc--------ccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHH
Q 025141 163 NDARAELESRKESYDVIIGDLADPIEGGP--------CYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCI 234 (257)
Q Consensus 163 ~Da~~~l~~~~~~fDvIi~D~~~~~~~~p--------~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~ 234 (257)
+|+........++||+|+.+||-...... +..-....|++. +.+.|+|||.+++-... ++.........+
T Consensus 249 gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~-~l~~Lk~gGr~a~V~p~-~~L~~~~~~~~i 326 (541)
T 2ar0_A 249 GNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQH-IIETLHPGGRAAVVVPD-NVLFEGGKGTDI 326 (541)
T ss_dssp SCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHH-HHHHEEEEEEEEEEEEH-HHHHCCTHHHHH
T ss_pred CCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHH-HHHHhCCCCEEEEEecC-cceecCcHHHHH
Confidence 99876543334689999999873211000 000112368888 68899999988765311 101111123445
Q ss_pred HHHHhhhCCceEEEeecCcccc
Q 025141 235 YNTLRQVFKCGCCALFSSYSFF 256 (257)
Q Consensus 235 ~~~l~~~F~~v~~~~~~~~~~~ 256 (257)
.+.|.+.+.-..++..++-.|+
T Consensus 327 R~~L~~~~~l~~ii~Lp~~~F~ 348 (541)
T 2ar0_A 327 RRDLMDKCHLHTILRLPTGIFY 348 (541)
T ss_dssp HHHHHHHEEEEEEEECCSSCSS
T ss_pred HHHHhhcCCEEEEEEcCcCccc
Confidence 5556555544445555554443
No 273
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.63 E-value=2.5e-08 Score=88.09 Aligned_cols=75 Identities=21% Similarity=0.329 Sum_probs=58.7
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.++.+|||||||+|.++..+++. ..+|++||+|+.+++.+++++...+ .++++++.+|+.++- .++||+|+
T Consensus 41 ~~~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a~~~~~~~~----~~~v~~~~~D~~~~~---~~~~D~Vv 111 (299)
T 2h1r_A 41 KSSDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEVKKRCLYEG----YNNLEVYEGDAIKTV---FPKFDVCT 111 (299)
T ss_dssp CTTCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHHHHHHHHTT----CCCEEC----CCSSC---CCCCSEEE
T ss_pred CCcCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcC----CCceEEEECchhhCC---cccCCEEE
Confidence 45679999999999999999986 3699999999999999999876432 268999999987642 35899999
Q ss_pred EcCC
Q 025141 181 GDLA 184 (257)
Q Consensus 181 ~D~~ 184 (257)
+|++
T Consensus 112 ~n~p 115 (299)
T 2h1r_A 112 ANIP 115 (299)
T ss_dssp EECC
T ss_pred EcCC
Confidence 9976
No 274
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.61 E-value=5.2e-07 Score=81.75 Aligned_cols=135 Identities=12% Similarity=0.073 Sum_probs=93.1
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhcc--CCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNK--EAFSDPRLELVINDARAELESRKESYDVI 179 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~--~~~~~~rv~i~~~Da~~~l~~~~~~fDvI 179 (257)
+..+|||+++|.|+=+.+++.......|+++|+++.-++..++++...+ ......++.+...|++.+-....+.||.|
T Consensus 148 pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD~V 227 (359)
T 4fzv_A 148 PGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRV 227 (359)
T ss_dssp TTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEEEE
T ss_pred CCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCCEE
Confidence 4579999999999988888876555689999999999999888875321 11123588999999999876667899999
Q ss_pred EEcCCCCC----C--CCccc-CC-----------chHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHH
Q 025141 180 IGDLADPI----E--GGPCY-KL-----------YTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNT 237 (257)
Q Consensus 180 i~D~~~~~----~--~~p~~-~L-----------~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~ 237 (257)
++|++-.. . ..|.. .. ...+.+.. +.+.|||||+++--+.+....-+......+++.
T Consensus 228 LlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~-a~~~lkpGG~LVYsTCSl~~~ENE~vV~~~L~~ 302 (359)
T 4fzv_A 228 LVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAA-GLLATKPGGHVVYSTCSLSHLQNEYVVQGAIEL 302 (359)
T ss_dssp EEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHH-HHHTEEEEEEEEEEESCCCTTTTHHHHHHHHHH
T ss_pred EECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHH-HHhcCCCCcEEEEEeCCCchhhCHHHHHHHHHh
Confidence 99998321 0 11110 00 12466777 678999999998765544322333444444443
No 275
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.59 E-value=1.1e-07 Score=93.63 Aligned_cols=148 Identities=11% Similarity=0.052 Sum_probs=92.6
Q ss_pred CCCeEEEEeccchHHHHHHHhcCC---CcEEEEEECCHHHHHHH--HhhhhhccCCCCCCCeEEEEcchHHHHhcCCCce
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKT---VEKVVMCDIDEEVVEFC--KSYLVVNKEAFSDPRLELVINDARAELESRKESY 176 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~---~~~v~~VEid~~vi~~a--~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~f 176 (257)
.+.+|||.|||+|+++..+++..+ ..+++++|+|+.++++| +.++..+.-....+...+...|....-.....+|
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kF 400 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANV 400 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTE
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCC
Confidence 467999999999999999887532 35799999999999999 5544332110112234666777655211234689
Q ss_pred eEEEEcCCCCC-CCCccc-----------------C-----CchHHHHHHHHcCcCCCCcEEEEecCCCCCCC--ChHHH
Q 025141 177 DVIIGDLADPI-EGGPCY-----------------K-----LYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFS--HTEVF 231 (257)
Q Consensus 177 DvIi~D~~~~~-~~~p~~-----------------~-----L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~--~~~~~ 231 (257)
|+|+.+||-.. ...+.. . -....|++. +.+.|+|||.+++-.... +. .....
T Consensus 401 DVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~-Al~lLKpGGrLAfIlP~s--~Lf~sg~~~ 477 (878)
T 3s1s_A 401 SVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLEL-VTELVQDGTVISAIMPKQ--YLTAQGNES 477 (878)
T ss_dssp EEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHH-HHHHSCTTCEEEEEEETH--HHHCCSHHH
T ss_pred CEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHH-HHHhcCCCcEEEEEEChH--HhccCChHH
Confidence 99999997311 000000 0 012357888 688999999888754211 22 22334
Q ss_pred HHHHHHHhhhCCceEEEeecC
Q 025141 232 SCIYNTLRQVFKCGCCALFSS 252 (257)
Q Consensus 232 ~~~~~~l~~~F~~v~~~~~~~ 252 (257)
..+.+.|.+.+.-...+.++.
T Consensus 478 kkLRk~LLe~~~I~aIIdLP~ 498 (878)
T 3s1s_A 478 KAFREFLVGNFGLEHIFLYPR 498 (878)
T ss_dssp HHHHHHHTTTTCEEEEEECCB
T ss_pred HHHHHHHHhCCCeEEEEECCC
Confidence 566666766666666666654
No 276
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.56 E-value=4.6e-07 Score=78.02 Aligned_cols=74 Identities=31% Similarity=0.486 Sum_probs=58.5
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHH-hcCCCceeEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAEL-ESRKESYDVI 179 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l-~~~~~~fDvI 179 (257)
.+..+|||||||+|.++..+++. +..+|++||+|+.+++.+++. . .++++++.+|+.++- ....+.| .|
T Consensus 30 ~~~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~~~-~-------~~~v~~i~~D~~~~~~~~~~~~~-~v 99 (249)
T 3ftd_A 30 EEGNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLKSI-G-------DERLEVINEDASKFPFCSLGKEL-KV 99 (249)
T ss_dssp CTTCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHTTS-C-------CTTEEEECSCTTTCCGGGSCSSE-EE
T ss_pred CCcCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHHhc-c-------CCCeEEEEcchhhCChhHccCCc-EE
Confidence 35679999999999999999987 347999999999999999986 2 258999999997752 2222234 77
Q ss_pred EEcCC
Q 025141 180 IGDLA 184 (257)
Q Consensus 180 i~D~~ 184 (257)
+.+++
T Consensus 100 v~NlP 104 (249)
T 3ftd_A 100 VGNLP 104 (249)
T ss_dssp EEECC
T ss_pred EEECc
Confidence 87765
No 277
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.54 E-value=2.1e-07 Score=81.60 Aligned_cols=109 Identities=12% Similarity=0.033 Sum_probs=82.2
Q ss_pred CCCCCeEEEEeccchHHHHHHHhcC-----CCcEEEEEECCHH--------------------------HHHHHHhhhhh
Q 025141 100 HPNPKTIFIMGGGEGSTAREILRHK-----TVEKVVMCDIDEE--------------------------VVEFCKSYLVV 148 (257)
Q Consensus 100 ~~~~~~VL~IG~G~G~~~~~l~~~~-----~~~~v~~VEid~~--------------------------vi~~a~~~~~~ 148 (257)
...|++||++|+..|..+..++... +..+|+++|..+. .++.++++|..
T Consensus 104 ~~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~ 183 (282)
T 2wk1_A 104 NNVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRN 183 (282)
T ss_dssp TTCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHH
T ss_pred cCCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHH
Confidence 3568899999999999887765421 2468999997521 36678888864
Q ss_pred ccCCCCCCCeEEEEcchHHHHhcC-CCceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 149 NKEAFSDPRLELVINDARAELESR-KESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 149 ~~~~~~~~rv~i~~~Da~~~l~~~-~~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
.+ +..++++++.+|+.+.+... .++||+|++|.-. .-.+.++++. +..+|+|||++++.-
T Consensus 184 ~g--l~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~--------y~~~~~~Le~-~~p~L~pGGiIv~DD 244 (282)
T 2wk1_A 184 YD--LLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL--------YESTWDTLTN-LYPKVSVGGYVIVDD 244 (282)
T ss_dssp TT--CCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS--------HHHHHHHHHH-HGGGEEEEEEEEESS
T ss_pred cC--CCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc--------cccHHHHHHH-HHhhcCCCEEEEEcC
Confidence 42 23479999999999998765 4789999999631 1125688998 799999999999853
No 278
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.54 E-value=6e-08 Score=87.34 Aligned_cols=97 Identities=18% Similarity=0.131 Sum_probs=72.3
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~ 181 (257)
...+|||||||+|..+..+++..+..+++++|+ +.+++.+++ .++++++.+|+.+ .. ..||+|++
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~d~~~---~~-~~~D~v~~ 257 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG----------NENLNFVGGDMFK---SI-PSADAVLL 257 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC----------CSSEEEEECCTTT---CC-CCCSEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc----------CCCcEEEeCccCC---CC-CCceEEEE
Confidence 457999999999999999998755568999999 888876654 1469999999865 22 25999998
Q ss_pred cCCCCCCCCcccCCchHHHHHHHHcCcCCC---CcEEEEe
Q 025141 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNP---EGIFVTQ 218 (257)
Q Consensus 182 D~~~~~~~~p~~~L~t~ef~~~~~~~~L~p---gGil~~~ 218 (257)
...-+. .+ ......+++. +++.|+| ||.+++.
T Consensus 258 ~~vlh~--~~--d~~~~~~l~~-~~~~L~p~~~gG~l~i~ 292 (358)
T 1zg3_A 258 KWVLHD--WN--DEQSLKILKN-SKEAISHKGKDGKVIII 292 (358)
T ss_dssp ESCGGG--SC--HHHHHHHHHH-HHHHTGGGGGGCEEEEE
T ss_pred cccccC--CC--HHHHHHHHHH-HHHhCCCCCCCcEEEEE
Confidence 754221 11 0112478898 7999999 9987764
No 279
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.47 E-value=9.1e-07 Score=86.83 Aligned_cols=113 Identities=7% Similarity=-0.026 Sum_probs=76.6
Q ss_pred CCCCeEEEEeccchHHHHHHHhcC------------------------------------------CCcEEEEEECCHHH
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHK------------------------------------------TVEKVVMCDIDEEV 138 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~------------------------------------------~~~~v~~VEid~~v 138 (257)
.....+||.+||+|+++.+++... ...+|+++|+|+.+
T Consensus 189 ~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~a 268 (703)
T 3v97_A 189 QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARV 268 (703)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHH
T ss_pred CCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHH
Confidence 345789999999999998877531 11479999999999
Q ss_pred HHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCC-CceeEEEEcCCCCCCCCcccCCchHHHHHHHHc---CcCCCCcE
Q 025141 139 VEFCKSYLVVNKEAFSDPRLELVINDARAELESRK-ESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVK---PRLNPEGI 214 (257)
Q Consensus 139 i~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~-~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~---~~L~pgGi 214 (257)
++.|+++....+ .+.++++..+|+.+...... ++||+|++|||-....+. .--..++|+. +. +.+.|||.
T Consensus 269 v~~A~~N~~~ag---v~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~--~~~l~~ly~~-l~~~lk~~~~g~~ 342 (703)
T 3v97_A 269 IQRARTNARLAG---IGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDS--EPALIALHSL-LGRIMKNQFGGWN 342 (703)
T ss_dssp HHHHHHHHHHTT---CGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---C--CHHHHHHHHH-HHHHHHHHCTTCE
T ss_pred HHHHHHHHHHcC---CCCceEEEECChhhCccccccCCCCEEEeCCCccccccc--hhHHHHHHHH-HHHHHHhhCCCCe
Confidence 999999987653 24579999999988532222 389999999874332111 0111344444 33 34557887
Q ss_pred EEEec
Q 025141 215 FVTQA 219 (257)
Q Consensus 215 l~~~~ 219 (257)
+++-+
T Consensus 343 ~~ilt 347 (703)
T 3v97_A 343 LSLFS 347 (703)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 77643
No 280
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.46 E-value=2.5e-07 Score=80.39 Aligned_cols=136 Identities=11% Similarity=0.037 Sum_probs=85.4
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
....+|||||||.|+.+..++...+..+++++++.-+.. ..+.....+ ..++....+|+ +...-.+++||+|+
T Consensus 73 ~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~-----~~pi~~~~~-g~~ii~~~~~~-dv~~l~~~~~DlVl 145 (277)
T 3evf_A 73 KLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGH-----EKPMNVQSL-GWNIITFKDKT-DIHRLEPVKCDTLL 145 (277)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTC-----CCCCCCCBT-TGGGEEEECSC-CTTTSCCCCCSEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCc-----ccccccCcC-CCCeEEEeccc-eehhcCCCCccEEE
Confidence 345689999999999999988766677888888864320 001111001 11333344443 11222357899999
Q ss_pred EcCCCCCCCCcc-cCCchHHHHHHHHcCcCCCC-cEEEEecCCCCCCCChHHHHHHHHHHhhhCCceEEEe
Q 025141 181 GDLADPIEGGPC-YKLYTKSFYEFVVKPRLNPE-GIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGCCAL 249 (257)
Q Consensus 181 ~D~~~~~~~~p~-~~L~t~ef~~~~~~~~L~pg-Gil~~~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~ 249 (257)
+|.... ...+. .+..+.+.++. +.+.|+|| |.+++..-.| + .+.+..+++.|++.|..|..+.
T Consensus 146 sD~apn-sG~~~~D~~rs~~LL~~-a~~~LkpG~G~FV~KVf~p--y--g~~~~~l~~~lk~~F~~V~~~K 210 (277)
T 3evf_A 146 CDIGES-SSSSVTEGERTVRVLDT-VEKWLACGVDNFCVKVLAP--Y--MPDVLEKLELLQRRFGGTVIRN 210 (277)
T ss_dssp ECCCCC-CSCHHHHHHHHHHHHHH-HHHHHTTCCSEEEEEESCT--T--SHHHHHHHHHHHHHHCCEEECC
T ss_pred ecCccC-cCchHHHHHHHHHHHHH-HHHHhCCCCCeEEEEecCC--C--CccHHHHHHHHHHhcCCEEEEe
Confidence 998643 21110 11112233565 68899999 9999975332 1 4567789999999999998765
No 281
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.44 E-value=5.8e-07 Score=87.32 Aligned_cols=106 Identities=22% Similarity=0.362 Sum_probs=74.5
Q ss_pred CCeEEEEeccchHHHHHHHhc----C---------CCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHH
Q 025141 103 PKTIFIMGGGEGSTAREILRH----K---------TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAEL 169 (257)
Q Consensus 103 ~~~VL~IG~G~G~~~~~l~~~----~---------~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l 169 (257)
.+-||++|||+|-+...+++. . ...+|.+||.++..+...++... ++ + ..+++++.+|.+++-
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng--~-~d~VtVI~gd~eev~ 485 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RT--W-KRRVTIIESDMRSLP 485 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HT--T-TTCSEEEESCGGGHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cC--C-CCeEEEEeCchhhcc
Confidence 457999999999996432221 1 12499999999987766555433 21 2 468999999999984
Q ss_pred h----cCCCceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEE
Q 025141 170 E----SRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (257)
Q Consensus 170 ~----~~~~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~ 217 (257)
- ...++.|+||+...... .. .+| ..|.+.. +.+.|||||+++-
T Consensus 486 lp~~~~~~ekVDIIVSElmGsf--l~-nEL-~pe~Ld~-v~r~Lkp~Gi~iP 532 (745)
T 3ua3_A 486 GIAKDRGFEQPDIIVSELLGSF--GD-NEL-SPECLDG-VTGFLKPTTISIP 532 (745)
T ss_dssp HHHHHTTCCCCSEEEECCCBTT--BG-GGS-HHHHHHT-TGGGSCTTCEEES
T ss_pred cccccCCCCcccEEEEeccccc--cc-hhc-cHHHHHH-HHHhCCCCcEEEC
Confidence 3 12589999999986422 11 223 4678887 6899999999874
No 282
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.42 E-value=1.8e-07 Score=75.29 Aligned_cols=88 Identities=11% Similarity=0.169 Sum_probs=66.0
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc--CCCceeE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES--RKESYDV 178 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~--~~~~fDv 178 (257)
.+..+||+||||. | .+|+++.+++.|++.+. .+++++.+|+.+.-.. .+++||+
T Consensus 11 ~~g~~vL~~~~g~---------------v-~vD~s~~ml~~a~~~~~--------~~~~~~~~d~~~~~~~~~~~~~fD~ 66 (176)
T 2ld4_A 11 SAGQFVAVVWDKS---------------S-PVEALKGLVDKLQALTG--------NEGRVSVENIKQLLQSAHKESSFDI 66 (176)
T ss_dssp CTTSEEEEEECTT---------------S-CHHHHHHHHHHHHHHTT--------TTSEEEEEEGGGGGGGCCCSSCEEE
T ss_pred CCCCEEEEecCCc---------------e-eeeCCHHHHHHHHHhcc--------cCcEEEEechhcCccccCCCCCEeE
Confidence 4678999999985 1 28999999999998753 2489999999875431 4578999
Q ss_pred EEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
|++...-++. .+ . ...++++ ++++|||||.+++.
T Consensus 67 V~~~~~l~~~-~~--~--~~~~l~~-~~r~LkpgG~l~~~ 100 (176)
T 2ld4_A 67 ILSGLVPGST-TL--H--SAEILAE-IARILRPGGCLFLK 100 (176)
T ss_dssp EEECCSTTCC-CC--C--CHHHHHH-HHHHEEEEEEEEEE
T ss_pred EEECChhhhc-cc--C--HHHHHHH-HHHHCCCCEEEEEE
Confidence 9986543221 01 1 2678999 79999999999985
No 283
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.39 E-value=5e-07 Score=79.15 Aligned_cols=76 Identities=18% Similarity=0.223 Sum_probs=57.3
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCC--cEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHH-hcCCC---
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTV--EKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAEL-ESRKE--- 174 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~--~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l-~~~~~--- 174 (257)
.+..+||+||||+|.++..+++.... .+|++||+|+.+++.+++.+ . ++++++++|+.++- .....
T Consensus 41 ~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~--~------~~v~~i~~D~~~~~~~~~~~~~~ 112 (279)
T 3uzu_A 41 ERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF--G------ELLELHAGDALTFDFGSIARPGD 112 (279)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH--G------GGEEEEESCGGGCCGGGGSCSSS
T ss_pred CCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc--C------CCcEEEECChhcCChhHhccccc
Confidence 45679999999999999999986321 23999999999999999873 2 48999999998752 21111
Q ss_pred -ceeEEEEcCC
Q 025141 175 -SYDVIIGDLA 184 (257)
Q Consensus 175 -~fDvIi~D~~ 184 (257)
..+.|+.+++
T Consensus 113 ~~~~~vv~NlP 123 (279)
T 3uzu_A 113 EPSLRIIGNLP 123 (279)
T ss_dssp SCCEEEEEECC
T ss_pred CCceEEEEccC
Confidence 2356777764
No 284
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.38 E-value=4.8e-07 Score=87.49 Aligned_cols=104 Identities=14% Similarity=0.253 Sum_probs=73.1
Q ss_pred CCeEEEEeccchHHHHHHH---hcCC-CcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeE
Q 025141 103 PKTIFIMGGGEGSTAREIL---RHKT-VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDV 178 (257)
Q Consensus 103 ~~~VL~IG~G~G~~~~~l~---~~~~-~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDv 178 (257)
.+.||++|+|+|-+...++ +... ..+|.+||-+|. ...+++....++ -+.+|+++.+|.+++ ..+++.|+
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~-A~~a~~~v~~N~---~~dkVtVI~gd~eev--~LPEKVDI 431 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPN-AVVTLENWQFEE---WGSQVTVVSSDMREW--VAPEKADI 431 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHH-HHHHHHHHHHHT---TGGGEEEEESCTTTC--CCSSCEEE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHH-HHHHHHHHHhcc---CCCeEEEEeCcceec--cCCcccCE
Confidence 3569999999999844333 3221 127899999985 556777665443 356999999999886 45689999
Q ss_pred EEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEE
Q 025141 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (257)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~ 217 (257)
||+...+.. .. .++ ..+.+.. ..+.|||||+++-
T Consensus 432 IVSEwMG~f--Ll-~E~-mlevL~A-rdr~LKPgGimiP 465 (637)
T 4gqb_A 432 IVSELLGSF--AD-NEL-SPECLDG-AQHFLKDDGVSIP 465 (637)
T ss_dssp EECCCCBTT--BG-GGC-HHHHHHH-HGGGEEEEEEEES
T ss_pred EEEEcCccc--cc-ccC-CHHHHHH-HHHhcCCCcEEcc
Confidence 999987432 11 222 2366666 6889999999873
No 285
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.37 E-value=3.3e-07 Score=79.07 Aligned_cols=74 Identities=12% Similarity=0.212 Sum_probs=56.4
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcE--EEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH-HhcC---CC
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEK--VVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE-LESR---KE 174 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~--v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~-l~~~---~~ 174 (257)
.+..+||+||||+|.++. +.+ . .+ |++||+|+.+++.+++.+.. .++++++.+|+.++ +... .+
T Consensus 20 ~~~~~VLEIG~G~G~lt~-l~~-~--~~~~v~avEid~~~~~~a~~~~~~------~~~v~~i~~D~~~~~~~~~~~~~~ 89 (252)
T 1qyr_A 20 QKGQAMVEIGPGLAALTE-PVG-E--RLDQLTVIELDRDLAARLQTHPFL------GPKLTIYQQDAMTFNFGELAEKMG 89 (252)
T ss_dssp CTTCCEEEECCTTTTTHH-HHH-T--TCSCEEEECCCHHHHHHHHTCTTT------GGGEEEECSCGGGCCHHHHHHHHT
T ss_pred CCcCEEEEECCCCcHHHH-hhh-C--CCCeEEEEECCHHHHHHHHHHhcc------CCceEEEECchhhCCHHHhhcccC
Confidence 345789999999999999 654 3 35 99999999999999987642 25899999999774 2111 12
Q ss_pred ceeEEEEcCC
Q 025141 175 SYDVIIGDLA 184 (257)
Q Consensus 175 ~fDvIi~D~~ 184 (257)
..|.|+.+++
T Consensus 90 ~~~~vvsNlP 99 (252)
T 1qyr_A 90 QPLRVFGNLP 99 (252)
T ss_dssp SCEEEEEECC
T ss_pred CceEEEECCC
Confidence 3578888875
No 286
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=98.30 E-value=2.8e-06 Score=74.30 Aligned_cols=137 Identities=19% Similarity=0.200 Sum_probs=82.7
Q ss_pred hHHHHHHHHHh--hcCCCCCeEEEEec------cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCe
Q 025141 87 IYHESLVHPAL--LHHPNPKTIFIMGG------GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRL 158 (257)
Q Consensus 87 ~y~e~l~~~~l--~~~~~~~~VL~IG~------G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv 158 (257)
-|++....+-- +..|...+||++|+ ..|+....-. .+....|+++||.|-+ .++.
T Consensus 92 kytqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS~VLr~~-~p~g~~VVavDL~~~~---------------sda~- 154 (344)
T 3r24_A 92 KYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTAVLRQW-LPTGTLLVDSDLNDFV---------------SDAD- 154 (344)
T ss_dssp HHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHHHHHHH-SCTTCEEEEEESSCCB---------------CSSS-
T ss_pred HHHHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcHHHHHHh-CCCCcEEEEeeCcccc---------------cCCC-
Confidence 36655443311 23577899999996 5666322211 2332589999998654 1233
Q ss_pred EEEEcchHHHHhcCCCceeEEEEcCCCCCC---CCcc--cCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHH
Q 025141 159 ELVINDARAELESRKESYDVIIGDLADPIE---GGPC--YKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSC 233 (257)
Q Consensus 159 ~i~~~Da~~~l~~~~~~fDvIi~D~~~~~~---~~p~--~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~ 233 (257)
.++.+|.... ....+||+|++|.+.... ..+. ..-+.+..+.- +++.|+|||.+++.. +.... . +
T Consensus 155 ~~IqGD~~~~--~~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdf-A~~~LkpGGsFvVKV-----FQGsg-~-~ 224 (344)
T 3r24_A 155 STLIGDCATV--HTANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGF-IKQKLALGGSIAVKI-----TEHSW-N-A 224 (344)
T ss_dssp EEEESCGGGE--EESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHH-HHHHEEEEEEEEEEE-----CSSSC-C-H
T ss_pred eEEEcccccc--ccCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHH-HHHhCcCCCEEEEEE-----ecCCC-H-H
Confidence 4489997653 234789999999874322 1111 11123444554 688999999999875 11111 1 3
Q ss_pred HHHHHhhhCCceEEEee
Q 025141 234 IYNTLRQVFKCGCCALF 250 (257)
Q Consensus 234 ~~~~l~~~F~~v~~~~~ 250 (257)
.+..+++.|..|+.+..
T Consensus 225 ~L~~lrk~F~~VK~fK~ 241 (344)
T 3r24_A 225 DLYKLMGHFSWWTAFVT 241 (344)
T ss_dssp HHHHHHTTEEEEEEEEE
T ss_pred HHHHHHhhCCeEEEECC
Confidence 45557779999988854
No 287
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.29 E-value=2e-07 Score=81.19 Aligned_cols=136 Identities=13% Similarity=0.064 Sum_probs=84.9
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~ 181 (257)
...+|||||||.|+.+..+++..++.+|+++|+.......+ ..... ...++.....+. +...-...++|+|++
T Consensus 90 ~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~p-----i~~~~-~g~~ii~~~~~~-dv~~l~~~~~DvVLS 162 (282)
T 3gcz_A 90 PTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKP-----IMRTT-LGWNLIRFKDKT-DVFNMEVIPGDTLLC 162 (282)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCC-----CCCCB-TTGGGEEEECSC-CGGGSCCCCCSEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccc-----ccccc-CCCceEEeeCCc-chhhcCCCCcCEEEe
Confidence 45689999999999999988766677899999975421111 11000 112222222221 112224578999999
Q ss_pred cCCCCCCCCcc-cCCchHHHHHHHHcCcCCCC--cEEEEecCCCCCCCChHHHHHHHHHHhhhCCceEEEee
Q 025141 182 DLADPIEGGPC-YKLYTKSFYEFVVKPRLNPE--GIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGCCALF 250 (257)
Q Consensus 182 D~~~~~~~~p~-~~L~t~ef~~~~~~~~L~pg--Gil~~~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~ 250 (257)
|.... ...+. .+..+.+.++. +.+.|+|| |.+++..-.| + .+.+..+++.|++.|..|..+.-
T Consensus 163 DmApn-sG~~~~D~~rs~~LL~~-A~~~Lk~g~~G~Fv~KvF~p--y--g~~~~~l~~~lk~~F~~V~~~KP 228 (282)
T 3gcz_A 163 DIGES-SPSIAVEEQRTLRVLNC-AKQWLQEGNYTEFCIKVLCP--Y--TPLIMEELSRLQLKHGGGLVRVP 228 (282)
T ss_dssp CCCCC-CSCHHHHHHHHHHHHHH-HHHHHHHHCCCEEEEEESCC--C--SHHHHHHHHHHHHHHCCEEECCT
T ss_pred cCccC-CCChHHHHHHHHHHHHH-HHHHcCCCCCCcEEEEEecC--C--CccHHHHHHHHHHhcCCEEEEcC
Confidence 98643 21110 12222234555 57899999 9999975222 1 45677899999999999987653
No 288
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.25 E-value=5.1e-08 Score=83.32 Aligned_cols=75 Identities=19% Similarity=0.393 Sum_probs=60.0
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.+..+|||||||+|.++..+++.. .+|+++|+|+.+++.+++++. ..++++++.+|+.++--...++| .|+
T Consensus 28 ~~~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~------~~~~v~~~~~D~~~~~~~~~~~f-~vv 98 (245)
T 1yub_A 28 KETDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLK------LNTRVTLIHQDILQFQFPNKQRY-KIV 98 (245)
T ss_dssp CSSEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTT------TCSEEEECCSCCTTTTCCCSSEE-EEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhc------cCCceEEEECChhhcCcccCCCc-EEE
Confidence 356789999999999999999863 699999999999999988765 13689999999887532213579 777
Q ss_pred EcCC
Q 025141 181 GDLA 184 (257)
Q Consensus 181 ~D~~ 184 (257)
++++
T Consensus 99 ~n~P 102 (245)
T 1yub_A 99 GNIP 102 (245)
T ss_dssp EECC
T ss_pred EeCC
Confidence 7765
No 289
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.21 E-value=2.3e-06 Score=74.96 Aligned_cols=136 Identities=13% Similarity=0.094 Sum_probs=84.6
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.+.++||||||+.|+++..+++..++..|+++|+...... .+.....+..+-+.+..+ .+...-.+.++|+|+
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~-----~P~~~~~~~~~iv~~~~~--~di~~l~~~~~DlVl 152 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHE-----KPIHMQTLGWNIVKFKDK--SNVFTMPTEPSDTLL 152 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSC-----CCCCCCBTTGGGEEEECS--CCTTTSCCCCCSEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccc-----ccccccccCCceEEeecC--ceeeecCCCCcCEEe
Confidence 5678999999999999999998656778999999643210 010000001111222211 112222357899999
Q ss_pred EcCCCCCCCCcc-cCCchHHHHHHHHcCcCCCC-cEEEEecCCCCCCCChHHHHHHHHHHhhhCCceEEEe
Q 025141 181 GDLADPIEGGPC-YKLYTKSFYEFVVKPRLNPE-GIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGCCAL 249 (257)
Q Consensus 181 ~D~~~~~~~~p~-~~L~t~ef~~~~~~~~L~pg-Gil~~~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~ 249 (257)
+|.... ...+. .+.-+...+.. +.+.|+|| |.|++..=.| + .+....++..|++.|..|..+.
T Consensus 153 sD~APn-sG~~~~D~~rs~~LL~~-A~~~LkpG~G~FV~KvF~~--y--G~~~~~ll~~lk~~F~~V~~~K 217 (300)
T 3eld_A 153 CDIGES-SSNPLVERDRTMKVLEN-FERWKHVNTENFCVKVLAP--Y--HPDVIEKLERLQLRFGGGIVRV 217 (300)
T ss_dssp ECCCCC-CSSHHHHHHHHHHHHHH-HHHHCCTTCCEEEEEESST--T--SHHHHHHHHHHHHHHCCEEECC
T ss_pred ecCcCC-CCCHHHHHHHHHHHHHH-HHHHhcCCCCcEEEEeccc--c--CccHHHHHHHHHHhCCcEEEEe
Confidence 998643 21110 11222334555 57899999 9999975222 1 4567789999999999998764
No 290
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.16 E-value=4.4e-06 Score=81.32 Aligned_cols=113 Identities=12% Similarity=0.124 Sum_probs=81.3
Q ss_pred CCeEEEEeccchHHHHHHHhc--------C----CCcEEEEEEC---CHHHHHHHHhhhh------------hcc-----
Q 025141 103 PKTIFIMGGGEGSTAREILRH--------K----TVEKVVMCDI---DEEVVEFCKSYLV------------VNK----- 150 (257)
Q Consensus 103 ~~~VL~IG~G~G~~~~~l~~~--------~----~~~~v~~VEi---d~~vi~~a~~~~~------------~~~----- 150 (257)
.-+||++|.|+|.......+. | ..-+++.+|. +++.++.+-..++ .+.
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 358999999999976555442 1 1136889999 8877774444321 000
Q ss_pred --CCCCC--CCeEEEEcchHHHHhcC----CCceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 151 --EAFSD--PRLELVINDARAELESR----KESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 151 --~~~~~--~rv~i~~~Da~~~l~~~----~~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
-.+.+ -+++++.+|+++.+.+. ..+||+|++|.|.|.. .| .+++.++|+. +.+.++|||.++..+
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~-np--~~w~~~~~~~-l~~~~~~g~~~~t~~ 219 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAK-NP--DMWTQNLFNA-MARLARPGGTLATFT 219 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGG-CG--GGSCHHHHHH-HHHHEEEEEEEEESC
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcC-Ch--hhhhHHHHHH-HHHHhCCCCEEEecc
Confidence 00122 45678999999999875 4679999999997752 33 7999999999 899999999998754
No 291
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.11 E-value=5.7e-06 Score=80.76 Aligned_cols=114 Identities=15% Similarity=0.171 Sum_probs=79.4
Q ss_pred CCCeEEEEeccchHHHHHHHhc--------CC----CcEEEEEECCH---HHHHHHHhhhh------------hc-----
Q 025141 102 NPKTIFIMGGGEGSTAREILRH--------KT----VEKVVMCDIDE---EVVEFCKSYLV------------VN----- 149 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~--------~~----~~~v~~VEid~---~vi~~a~~~~~------------~~----- 149 (257)
++-+||++|.|+|.....+.+. |. ..+++.+|..| +.+..+-+.++ .+
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 3468999999999976655442 11 14789999944 44443322221 00
Q ss_pred --cCCCCCC--CeEEEEcchHHHHhcC----CCceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 150 --KEAFSDP--RLELVINDARAELESR----KESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 150 --~~~~~~~--rv~i~~~Da~~~l~~~----~~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
.-.+.++ +++++.+|+++.+... ..++|.+++|.|.|.. .| .+++.++|.. +.+.++|||.++...
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~-np--~~w~~~~~~~-l~~~~~~g~~~~t~~ 211 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAK-NP--DMWNEQLFNA-MARMTRPGGTFSTFT 211 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC---CC--TTCSHHHHHH-HHHHEEEEEEEEESC
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCC-Ch--hhhhHHHHHH-HHHHhCCCCEEEecc
Confidence 0012233 5678999999999875 4789999999998753 34 7999999999 799999999998753
No 292
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.09 E-value=1.5e-05 Score=69.70 Aligned_cols=73 Identities=30% Similarity=0.274 Sum_probs=61.9
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH---HhcCC-Ccee
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE---LESRK-ESYD 177 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~---l~~~~-~~fD 177 (257)
+...+||++||.|+-++.+++. ..+|+++|.||.+++.|++ +. . +|++++++|..++ ++..+ +++|
T Consensus 22 ~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~-L~------~-~rv~lv~~~f~~l~~~L~~~g~~~vD 91 (285)
T 1wg8_A 22 PGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKG-LH------L-PGLTVVQGNFRHLKRHLAALGVERVD 91 (285)
T ss_dssp TTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHH-TC------C-TTEEEEESCGGGHHHHHHHTTCSCEE
T ss_pred CCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHh-hc------c-CCEEEEECCcchHHHHHHHcCCCCcC
Confidence 4578999999999999999997 3699999999999999998 53 1 5999999999876 44433 6799
Q ss_pred EEEEcCC
Q 025141 178 VIIGDLA 184 (257)
Q Consensus 178 vIi~D~~ 184 (257)
.|+.|+.
T Consensus 92 gIL~DLG 98 (285)
T 1wg8_A 92 GILADLG 98 (285)
T ss_dssp EEEEECS
T ss_pred EEEeCCc
Confidence 9999985
No 293
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.04 E-value=8.3e-06 Score=70.11 Aligned_cols=130 Identities=14% Similarity=0.033 Sum_probs=80.9
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCe---EEEEc-chHHHHhcCCCce
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRL---ELVIN-DARAELESRKESY 176 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv---~i~~~-Da~~~l~~~~~~f 176 (257)
.+..+||||||+-|+.+..+++..++..|.+..+-.+. ...+... ..+.+ ++..+ |.++ ..+.++
T Consensus 72 kpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-----~~~P~~~---~~~Gv~~i~~~~G~Df~~---~~~~~~ 140 (269)
T 2px2_A 72 QPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-----HEEPMLM---QSYGWNIVTMKSGVDVFY---KPSEIS 140 (269)
T ss_dssp CCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-----SCCCCCC---CSTTGGGEEEECSCCGGG---SCCCCC
T ss_pred CCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-----ccCCCcc---cCCCceEEEeeccCCccC---CCCCCC
Confidence 45679999999999999999986444455555553331 0111110 11344 44436 8765 224689
Q ss_pred eEEEEcCCCCCCCCcc-cCCchHHHHHHHHcCcCCCCc-EEEEecCCCCCCCChHHHHHHHHHHhhhCCceEE
Q 025141 177 DVIIGDLADPIEGGPC-YKLYTKSFYEFVVKPRLNPEG-IFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGCC 247 (257)
Q Consensus 177 DvIi~D~~~~~~~~p~-~~L~t~ef~~~~~~~~L~pgG-il~~~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~ 247 (257)
|+|++|.... ...+. .+.-+...+.. +.+.|+||| .+++..=.+ ..+.+.++++.|++.|..+.+
T Consensus 141 DvVLSDMAPn-SG~~~vD~~Rs~~aL~~-A~~~Lk~gG~~FvvKVFqg----~~~~~~~~l~~lk~~F~~vkv 207 (269)
T 2px2_A 141 DTLLCDIGES-SPSAEIEEQRTLRILEM-VSDWLSRGPKEFCIKILCP----YMPKVIEKLESLQRRFGGGLV 207 (269)
T ss_dssp SEEEECCCCC-CSCHHHHHHHHHHHHHH-HHHHHTTCCSEEEEEESCT----TSHHHHHHHHHHHHHHCCEEE
T ss_pred CEEEeCCCCC-CCccHHHHHHHHHHHHH-HHHHhhcCCcEEEEEECCC----CchHHHHHHHHHHHHcCCEEE
Confidence 9999998642 21211 11222234554 568999999 888875222 125677888899999998884
No 294
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.88 E-value=8.9e-05 Score=63.02 Aligned_cols=132 Identities=15% Similarity=0.081 Sum_probs=89.7
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEc-chHHHHhcCCCceeEEE
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVIN-DARAELESRKESYDVII 180 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~-Da~~~l~~~~~~fDvIi 180 (257)
....||||||+.|+.+..++...++.+|.++|+-+.-. ..+..-..+.-+.++++.+ |.+ ++ .+.++|.|+
T Consensus 78 ~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~gh-----e~P~~~~s~gwn~v~fk~gvDv~-~~--~~~~~Dtll 149 (267)
T 3p8z_A 78 PEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGH-----EEPVPMSTYGWNIVKLMSGKDVF-YL--PPEKCDTLL 149 (267)
T ss_dssp CCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTS-----CCCCCCCCTTTTSEEEECSCCGG-GC--CCCCCSEEE
T ss_pred CCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCc-----cCcchhhhcCcCceEEEecccee-ec--CCccccEEE
Confidence 45699999999999999888887888999999965532 1122222233467899988 862 22 237799999
Q ss_pred EcCCCCCCCCcc-cCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCceEEE
Q 025141 181 GDLADPIEGGPC-YKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGCCA 248 (257)
Q Consensus 181 ~D~~~~~~~~p~-~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~ 248 (257)
+|... ....|. .+--|...++. +.+.|++ |-+++..-+| ..++ +.+.++.|+..|..+.+.
T Consensus 150 cDIge-Ss~~~~vE~~RtlrvLel-a~~wL~~-~~fc~KVl~p---y~p~-v~e~l~~lq~~fgg~lVR 211 (267)
T 3p8z_A 150 CDIGE-SSPSPTVEESRTIRVLKM-VEPWLKN-NQFCIKVLNP---YMPT-VIEHLERLQRKHGGMLVR 211 (267)
T ss_dssp ECCCC-CCSCHHHHHHHHHHHHHH-HGGGCSS-CEEEEEESCC---CSHH-HHHHHHHHHHHHCCEEEC
T ss_pred EecCC-CCCChhhhhhHHHHHHHH-HHHhccc-CCEEEEEccC---CChh-HHHHHHHHHHHhCCEeEe
Confidence 99875 211221 12223456676 6889998 7888887666 2333 447778888888877654
No 295
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.70 E-value=6.4e-05 Score=71.36 Aligned_cols=148 Identities=12% Similarity=0.050 Sum_probs=88.1
Q ss_pred CCCeEEEEeccchHHHHHHHhc----CC---------CcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH
Q 025141 102 NPKTIFIMGGGEGSTAREILRH----KT---------VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE 168 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~----~~---------~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~ 168 (257)
...+|+|-.||+|++...+.++ .. ...+.++|+++.+..+|+-++-+.+ .+.-++..+|...+
T Consensus 217 ~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg----~~~~~I~~~dtL~~ 292 (530)
T 3ufb_A 217 LGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHG----LEYPRIDPENSLRF 292 (530)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHT----CSCCEEECSCTTCS
T ss_pred CCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcC----CccccccccccccC
Confidence 3468999999999998766542 11 1369999999999999998876653 23446788887643
Q ss_pred H-hc--CCCceeEEEEcCCCCCCC----------CcccCCchHHHHHHHHcCcC-------CCCcEEEEecCCCCCCCCh
Q 025141 169 L-ES--RKESYDVIIGDLADPIEG----------GPCYKLYTKSFYEFVVKPRL-------NPEGIFVTQAGPAGIFSHT 228 (257)
Q Consensus 169 l-~~--~~~~fDvIi~D~~~~~~~----------~p~~~L~t~ef~~~~~~~~L-------~pgGil~~~~~~~~~~~~~ 228 (257)
- .. ...+||+|+.+||-.... .+...-...-|++. +.+.| +|||++++-... +++...
T Consensus 293 ~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~-~l~~Lk~~~~~l~~gGr~avVlP~-g~Lf~~ 370 (530)
T 3ufb_A 293 PLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQL-IMRKLKRPGHGSDNGGRAAVVVPN-GTLFSD 370 (530)
T ss_dssp CGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHH-HHHHBCCTTSSSSSCCEEEEEEEH-HHHHCC
T ss_pred chhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHH-HHHHhhhhhhccCCCceEEEEecc-hhhhcc
Confidence 1 11 235799999999732110 00001112346666 34455 479987764311 111122
Q ss_pred HHHHHHHHHHhhhCCceEEEeecCccc
Q 025141 229 EVFSCIYNTLRQVFKCGCCALFSSYSF 255 (257)
Q Consensus 229 ~~~~~~~~~l~~~F~~v~~~~~~~~~~ 255 (257)
..-..+.+.|-+.+.-..++..++=-|
T Consensus 371 ~~~~~iRk~Lle~~~l~aII~LP~~~F 397 (530)
T 3ufb_A 371 GISARIKEELLKNFNLHTIVRLPEGVF 397 (530)
T ss_dssp THHHHHHHHHHHHSEEEEEEECCTTTT
T ss_pred chHHHHHHHHhhcCEEEEEEECCcccC
Confidence 223456666666665555655555444
No 296
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.58 E-value=8.1e-05 Score=67.16 Aligned_cols=59 Identities=8% Similarity=0.112 Sum_probs=50.0
Q ss_pred CCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH
Q 025141 103 PKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE 168 (257)
Q Consensus 103 ~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~ 168 (257)
...||+||.|.|.+++.++......+|++||+|+..+...++.+ . .++++++.+|+.++
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~--~-----~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF--E-----GSPLQILKRDPYDW 117 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT--T-----TSSCEEECSCTTCH
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc--c-----CCCEEEEECCccch
Confidence 47899999999999999998533368999999999999888765 1 36899999999765
No 297
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.57 E-value=9.3e-05 Score=64.79 Aligned_cols=133 Identities=14% Similarity=0.061 Sum_probs=86.3
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEc-chHHHHhcCCCceeEEE
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVIN-DARAELESRKESYDVII 180 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~-Da~~~l~~~~~~fDvIi 180 (257)
....||||||+.|+.+..++...++.+|.++|+-..-.+ .|..-..+.-+-+.++.+ |.+ ++. +.++|+|+
T Consensus 94 ~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he-----~P~~~~ql~w~lV~~~~~~Dv~-~l~--~~~~D~iv 165 (321)
T 3lkz_A 94 PVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHE-----EPQLVQSYGWNIVTMKSGVDVF-YRP--SECCDTLL 165 (321)
T ss_dssp CCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSC-----CCCCCCBTTGGGEEEECSCCTT-SSC--CCCCSEEE
T ss_pred CCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCcc-----CcchhhhcCCcceEEEeccCHh-hCC--CCCCCEEE
Confidence 445999999999999998888878889999999654210 011000111133677766 653 232 26799999
Q ss_pred EcCCCCCCCCcc-cCCchHHHHHHHHcCcCCCC-cEEEEecCCCCCCCChHHHHHHHHHHhhhCCceEEE
Q 025141 181 GDLADPIEGGPC-YKLYTKSFYEFVVKPRLNPE-GIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGCCA 248 (257)
Q Consensus 181 ~D~~~~~~~~p~-~~L~t~ef~~~~~~~~L~pg-Gil~~~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~ 248 (257)
+|..... ..|. ..--|...++. +.+.|+++ |-+++..-+| ..+ .+.+.++.|+..|..+.+.
T Consensus 166 cDigeSs-~~~~ve~~Rtl~vLel-~~~wL~~~~~~f~~KVl~p---Y~~-~v~e~l~~lq~~fgg~lvr 229 (321)
T 3lkz_A 166 CDIGESS-SSAEVEEHRTIRVLEM-VEDWLHRGPREFCVKVLCP---YMP-KVIEKMELLQRRYGGGLVR 229 (321)
T ss_dssp ECCCCCC-SCHHHHHHHHHHHHHH-HHHHHTTCCCEEEEEESCT---TSH-HHHHHHHHHHHHHCCEEEC
T ss_pred EECccCC-CChhhhhhHHHHHHHH-HHHHhccCCCcEEEEEcCC---CCh-HHHHHHHHHHHHhCCEeEe
Confidence 9997322 1221 11223345665 57789988 8999887665 223 3457888899999877664
No 298
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.54 E-value=0.00035 Score=62.59 Aligned_cols=124 Identities=16% Similarity=0.217 Sum_probs=80.8
Q ss_pred CCeEEEEeccchHHHHHHHhcCC-CcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcC-C-CceeEE
Q 025141 103 PKTIFIMGGGEGSTAREILRHKT-VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR-K-ESYDVI 179 (257)
Q Consensus 103 ~~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~-~-~~fDvI 179 (257)
+.+|+++.||.|++...+.+..- ...|.++|+|+..++..+.+++ ...++.+|..++.... . ..+|+|
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~---------~~~~~~~Di~~~~~~~~~~~~~D~l 72 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP---------HTQLLAKTIEGITLEEFDRLSFDMI 72 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT---------TSCEECSCGGGCCHHHHHHHCCSEE
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc---------ccccccCCHHHccHhHcCcCCcCEE
Confidence 45899999999999998887521 3579999999999999999874 2346778877654211 1 269999
Q ss_pred EEcCCC-CCC-CC-------cccCCchHHHHHHHHcCcCC--CCcEEEEecCCCCCCCChHHHHHHHHHHhhh
Q 025141 180 IGDLAD-PIE-GG-------PCYKLYTKSFYEFVVKPRLN--PEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV 241 (257)
Q Consensus 180 i~D~~~-~~~-~~-------p~~~L~t~ef~~~~~~~~L~--pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~ 241 (257)
+.+++- +.+ .+ +...| -.++++. .+.++ |.-+++=|+.. +.....+..+.+.|.+.
T Consensus 73 ~~gpPCq~fS~ag~~~g~~d~r~~l-~~~~~~~--i~~~~~~P~~~~~ENV~~---l~~~~~~~~i~~~l~~~ 139 (343)
T 1g55_A 73 LMSPPCQPFTRIGRQGDMTDSRTNS-FLHILDI--LPRLQKLPKYILLENVKG---FEVSSTRDLLIQTIENC 139 (343)
T ss_dssp EECCC------------------CH-HHHHHHH--GGGCSSCCSEEEEEEETT---GGGSHHHHHHHHHHHHT
T ss_pred EEcCCCcchhhcCCcCCccCccchH-HHHHHHH--HHHhcCCCCEEEEeCCcc---ccCHHHHHHHHHHHHHC
Confidence 999872 111 01 11112 2466664 35677 88777655422 22345677888888764
No 299
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.54 E-value=0.00014 Score=65.02 Aligned_cols=75 Identities=23% Similarity=0.262 Sum_probs=60.0
Q ss_pred CCCeEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHH---hcCC--Cc
Q 025141 102 NPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAEL---ESRK--ES 175 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l---~~~~--~~ 175 (257)
+...++|..+|.|+-+..+++. .+..+|+++|.||++++.++ .+ .++|+++++++..++. ...+ ++
T Consensus 57 pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL-------~~~Rv~lv~~nF~~l~~~L~~~g~~~~ 128 (347)
T 3tka_A 57 PDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI-------DDPRFSIIHGPFSALGEYVAERDLIGK 128 (347)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC-------CCTTEEEEESCGGGHHHHHHHTTCTTC
T ss_pred CCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh-------cCCcEEEEeCCHHHHHHHHHhcCCCCc
Confidence 3468999999999999999986 34579999999999999995 33 2479999999887653 3322 36
Q ss_pred eeEEEEcCC
Q 025141 176 YDVIIGDLA 184 (257)
Q Consensus 176 fDvIi~D~~ 184 (257)
+|.|+.|+-
T Consensus 129 vDgILfDLG 137 (347)
T 3tka_A 129 IDGILLDLG 137 (347)
T ss_dssp EEEEEEECS
T ss_pred ccEEEECCc
Confidence 999999985
No 300
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.39 E-value=9.6e-05 Score=58.35 Aligned_cols=64 Identities=16% Similarity=0.106 Sum_probs=45.5
Q ss_pred CCCCeEEEEeccch-HHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025141 101 PNPKTIFIMGGGEG-STAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (257)
Q Consensus 101 ~~~~~VL~IG~G~G-~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvI 179 (257)
..+.+||+||||.| ..+..|.++.+ ..|+++||+|..++ ++.+|.++-..+.-+.||+|
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~~g-~~V~atDInp~Av~-------------------~v~dDiF~P~~~~Y~~~DLI 93 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKHSK-VDLVLTDIKPSHGG-------------------IVRDDITSPRMEIYRGAALI 93 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHHSC-CEEEEECSSCSSTT-------------------EECCCSSSCCHHHHTTEEEE
T ss_pred CCCCcEEEEccCCChHHHHHHHHhCC-CeEEEEECCccccc-------------------eEEccCCCCcccccCCcCEE
Confidence 34679999999999 58988887544 58999999987755 45556544222222589999
Q ss_pred -EEcCC
Q 025141 180 -IGDLA 184 (257)
Q Consensus 180 -i~D~~ 184 (257)
-+.++
T Consensus 94 YsirPP 99 (153)
T 2k4m_A 94 YSIRPP 99 (153)
T ss_dssp EEESCC
T ss_pred EEcCCC
Confidence 55544
No 301
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.37 E-value=0.0012 Score=60.10 Aligned_cols=112 Identities=11% Similarity=-0.025 Sum_probs=69.4
Q ss_pred CCeEEEEeccchHHHHHHHhc-----------------CCCcEEEEEECC-----------HHHHHHHHhhhhhccCCCC
Q 025141 103 PKTIFIMGGGEGSTAREILRH-----------------KTVEKVVMCDID-----------EEVVEFCKSYLVVNKEAFS 154 (257)
Q Consensus 103 ~~~VL~IG~G~G~~~~~l~~~-----------------~~~~~v~~VEid-----------~~vi~~a~~~~~~~~~~~~ 154 (257)
+-+|+|+||++|..+..+... ++.-+|...|+- |...+..++.. + .
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~---g---~ 126 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKEN---G---R 126 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHT---C---C
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhc---c---C
Confidence 678999999999977655542 233467777875 33333322211 1 1
Q ss_pred CCCeEEEEcchHHHHhc--CCCceeEEEEcCCCCCCCCcccCCch---------------------------------HH
Q 025141 155 DPRLELVINDARAELES--RKESYDVIIGDLADPIEGGPCYKLYT---------------------------------KS 199 (257)
Q Consensus 155 ~~rv~i~~~Da~~~l~~--~~~~fDvIi~D~~~~~~~~p~~~L~t---------------------------------~e 199 (257)
..+-.++.+.+..|-.. +.+.+|+|++...-+|....+..|.. ..
T Consensus 127 ~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~ 206 (384)
T 2efj_A 127 KIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTT 206 (384)
T ss_dssp CTTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHH
Confidence 12346777777777654 45889999999887774322222211 12
Q ss_pred HHHHHHcCcCCCCcEEEEecCC
Q 025141 200 FYEFVVKPRLNPEGIFVTQAGP 221 (257)
Q Consensus 200 f~~~~~~~~L~pgGil~~~~~~ 221 (257)
|++. .++.|+|||.+++....
T Consensus 207 FL~~-Ra~eL~pGG~mvl~~~g 227 (384)
T 2efj_A 207 FLRI-HSEELISRGRMLLTFIC 227 (384)
T ss_dssp HHHH-HHHHEEEEEEEEEEEEC
T ss_pred HHHH-HHHHhccCCeEEEEEec
Confidence 3565 58999999999988643
No 302
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.30 E-value=0.0026 Score=56.65 Aligned_cols=124 Identities=13% Similarity=0.101 Sum_probs=83.6
Q ss_pred CCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEEEc
Q 025141 103 PKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGD 182 (257)
Q Consensus 103 ~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~D 182 (257)
..+++++.||.|++...+.+. +...+.++|+|+..++..+.+++.. . .+|..++....-..+|+|+.+
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a-G~~~v~~~e~d~~a~~t~~~N~~~~------~-----~~Di~~~~~~~~~~~D~l~~g 78 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC-GAECVYSNEWDKYAQEVYEMNFGEK------P-----EGDITQVNEKTIPDHDILCAG 78 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-TCEEEEEECCCHHHHHHHHHHHSCC------C-----BSCGGGSCGGGSCCCSEEEEE
T ss_pred CCcEEEECCCcCHHHHHHHHC-CCeEEEEEeCCHHHHHHHHHHcCCC------C-----cCCHHHcCHhhCCCCCEEEEC
Confidence 468999999999999998875 5678899999999999999987521 1 588877654433569999999
Q ss_pred CCC-CCC-C-------CcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhh
Q 025141 183 LAD-PIE-G-------GPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV 241 (257)
Q Consensus 183 ~~~-~~~-~-------~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~ 241 (257)
++- +.+ . .+...| -.++++. + +.++|.-+++=|...-........+..+.+.|++.
T Consensus 79 pPCQ~fS~ag~~~g~~d~r~~L-~~~~~r~-i-~~~~P~~~~~ENV~gl~~~~~~~~~~~i~~~l~~~ 143 (327)
T 2c7p_A 79 FPCQAFSISGKQKGFEDSRGTL-FFDIARI-V-REKKPKVVFMENVKNFASHDNGNTLEVVKNTMNEL 143 (327)
T ss_dssp CCCTTTCTTSCCCGGGSTTSCH-HHHHHHH-H-HHHCCSEEEEEEEGGGGTGGGGHHHHHHHHHHHHT
T ss_pred CCCCCcchhcccCCCcchhhHH-HHHHHHH-H-HhccCcEEEEeCcHHHHhccccHHHHHHHHHHHhC
Confidence 872 221 1 111122 2567775 4 46799877665652110011235677888888765
No 303
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.28 E-value=0.00036 Score=63.20 Aligned_cols=71 Identities=10% Similarity=0.085 Sum_probs=54.9
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
.+..+|||||++.|+.+..+++. + .+|++||+.+.--. +. .+++|+++.+|++.+.. ...++|+|+
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~r-g-~~V~aVD~~~l~~~-------l~----~~~~V~~~~~d~~~~~~-~~~~~D~vv 275 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKR-N-MWVYSVDNGPMAQS-------LM----DTGQVTWLREDGFKFRP-TRSNISWMV 275 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-T-CEEEEECSSCCCHH-------HH----TTTCEEEECSCTTTCCC-CSSCEEEEE
T ss_pred CCCCEEEEeCcCCCHHHHHHHHC-C-CEEEEEEhhhcChh-------hc----cCCCeEEEeCccccccC-CCCCcCEEE
Confidence 45689999999999999999986 3 59999997542211 11 35899999999988642 246799999
Q ss_pred EcCCC
Q 025141 181 GDLAD 185 (257)
Q Consensus 181 ~D~~~ 185 (257)
+|...
T Consensus 276 sDm~~ 280 (375)
T 4auk_A 276 CDMVE 280 (375)
T ss_dssp ECCSS
T ss_pred EcCCC
Confidence 99863
No 304
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.06 E-value=0.0016 Score=56.99 Aligned_cols=46 Identities=11% Similarity=0.077 Sum_probs=40.8
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhh
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVV 148 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~ 148 (257)
.+...|||++||+|+++.++++.. .+++++|+++.+++.|++++..
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~g--~~~~g~e~~~~~~~~a~~r~~~ 279 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARWG--RRALGVELVPRYAQLAKERFAR 279 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHHHH
Confidence 456799999999999999998863 5899999999999999998753
No 305
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.05 E-value=0.002 Score=58.39 Aligned_cols=124 Identities=15% Similarity=0.100 Sum_probs=81.0
Q ss_pred CeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-------CCCce
Q 025141 104 KTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-------RKESY 176 (257)
Q Consensus 104 ~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~-------~~~~f 176 (257)
-+|+++.||.|++...+.+. +...+.++|+|+...+..+.+++ ...++.+|..+.... ....+
T Consensus 3 ~~vidLFsG~GGlslG~~~a-G~~~v~avE~d~~a~~t~~~N~~---------~~~~~~~DI~~~~~~~~~~~~~~~~~~ 72 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA-GFDVKMAVEIDQHAINTHAINFP---------RSLHVQEDVSLLNAEIIKGFFKNDMPI 72 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH-TCEEEEEECSCHHHHHHHHHHCT---------TSEEECCCGGGCCHHHHHHHHCSCCCC
T ss_pred CeEEEEccCcCHHHHHHHHC-CCcEEEEEeCCHHHHHHHHHhCC---------CCceEecChhhcCHHHHHhhcccCCCe
Confidence 47999999999999888775 46678899999999999998764 456777887665321 24679
Q ss_pred eEEEEcCCC-CCC-CC------cccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhh
Q 025141 177 DVIIGDLAD-PIE-GG------PCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV 241 (257)
Q Consensus 177 DvIi~D~~~-~~~-~~------p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~ 241 (257)
|+|+.+++- +.+ .+ +...| -.+|++. -+.++|.-+++=|+..-........+..+. .|.+.
T Consensus 73 D~i~ggpPCQ~fS~ag~~~~~d~r~~L-~~~~~~~--v~~~~P~~~v~ENV~gl~s~~~~~~~~~i~-~l~~~ 141 (376)
T 3g7u_A 73 DGIIGGPPCQGFSSIGKGNPDDSRNQL-YMHFYRL--VSELQPLFFLAENVPGIMQEKYSGIRNKAF-NLVSG 141 (376)
T ss_dssp CEEEECCCCCTTC-------CHHHHHH-HHHHHHH--HHHHCCSEEEEEECTTTTCGGGHHHHHHHH-HHHHT
T ss_pred eEEEecCCCCCcccccCCCCCCchHHH-HHHHHHH--HHHhCCCEEEEecchHhhccCcHHHHHHHH-HHHcC
Confidence 999999873 221 01 11112 2466664 356899877776653211011234566666 66654
No 306
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.92 E-value=0.014 Score=50.15 Aligned_cols=136 Identities=15% Similarity=0.039 Sum_probs=82.6
Q ss_pred CCCCeEEEEeccchHHHHHHHhc-------CCCcEEEEEECCHHHH---------------------------H-H--HH
Q 025141 101 PNPKTIFIMGGGEGSTAREILRH-------KTVEKVVMCDIDEEVV---------------------------E-F--CK 143 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~-------~~~~~v~~VEid~~vi---------------------------~-~--a~ 143 (257)
.-|..|+++|+--|..+..++.. ....+|.++|.-.-+. + + .+
T Consensus 68 ~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 68 DVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp TSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 55789999999999987765431 2346899998321111 1 1 11
Q ss_pred hhhhhccCCCCCCCeEEEEcchHHHHhc-----CCCceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 144 SYLVVNKEAFSDPRLELVINDARAELES-----RKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 144 ~~~~~~~~~~~~~rv~i~~~Da~~~l~~-----~~~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
+++... +..+++++++.+++.+-+.. ...++|+|.+|.- . .. -+...++. +..+|+|||++++.
T Consensus 148 ~~~~~~--g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D-~--Y~-----~t~~~le~-~~p~l~~GGvIv~D 216 (257)
T 3tos_A 148 ECSDFF--GHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLD-L--YE-----PTKAVLEA-IRPYLTKGSIVAFD 216 (257)
T ss_dssp HTTSTT--TTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCC-C--HH-----HHHHHHHH-HGGGEEEEEEEEES
T ss_pred hhhhhc--CCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCc-c--cc-----hHHHHHHH-HHHHhCCCcEEEEc
Confidence 111111 11247999999999988754 2357999999972 1 11 25678888 78999999999985
Q ss_pred c-CCCCCCCChHHHHHHHHHHhhhCCceEEEee
Q 025141 219 A-GPAGIFSHTEVFSCIYNTLRQVFKCGCCALF 250 (257)
Q Consensus 219 ~-~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~ 250 (257)
- +.+. | +...+++...+.+.--.+..+.+
T Consensus 217 D~~~~~-w--~G~~~A~~ef~~~~~~~i~~~p~ 246 (257)
T 3tos_A 217 ELDNPK-W--PGENIAMRKVLGLDHAPLRLLPG 246 (257)
T ss_dssp STTCTT-C--THHHHHHHHHTCTTSSCCEECTT
T ss_pred CCCCCC-C--hHHHHHHHHHHhhCCCeEEEccC
Confidence 4 2332 2 23444444444443323344333
No 307
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=96.86 E-value=0.0016 Score=59.19 Aligned_cols=118 Identities=11% Similarity=0.053 Sum_probs=69.2
Q ss_pred CCCCeEEEEeccchHHHHHHHh--------c-------CCCcEEEEEECCHHHHHHHHhhhhhccC-----CC---CCCC
Q 025141 101 PNPKTIFIMGGGEGSTAREILR--------H-------KTVEKVVMCDIDEEVVEFCKSYLVVNKE-----AF---SDPR 157 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~--------~-------~~~~~v~~VEid~~vi~~a~~~~~~~~~-----~~---~~~r 157 (257)
|.+-+|+|+|||+|..+..+.. + ++.-+|...|+-..-....=+.++.... .+ ...+
T Consensus 51 ~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~ 130 (374)
T 3b5i_A 51 PPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNR 130 (374)
T ss_dssp CCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCB
T ss_pred CCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCC
Confidence 4467899999999998766521 1 2345677777755443332222221100 00 0112
Q ss_pred eEEEEcchHHHHhc--CCCceeEEEEcCCCCCCCCcccCCc-------------------------h-------HHHHHH
Q 025141 158 LELVINDARAELES--RKESYDVIIGDLADPIEGGPCYKLY-------------------------T-------KSFYEF 203 (257)
Q Consensus 158 v~i~~~Da~~~l~~--~~~~fDvIi~D~~~~~~~~p~~~L~-------------------------t-------~ef~~~ 203 (257)
-.++.+.+..|-.. +.+.+|+|++...-+|....+..+. . ..|++.
T Consensus 131 ~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ 210 (374)
T 3b5i_A 131 SYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRA 210 (374)
T ss_dssp CSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 23556666665433 3588999999998777432222221 0 235666
Q ss_pred HHcCcCCCCcEEEEec
Q 025141 204 VVKPRLNPEGIFVTQA 219 (257)
Q Consensus 204 ~~~~~L~pgGil~~~~ 219 (257)
.++.|+|||.+++..
T Consensus 211 -ra~eL~pGG~mvl~~ 225 (374)
T 3b5i_A 211 -RAAEVKRGGAMFLVC 225 (374)
T ss_dssp -HHHHEEEEEEEEEEE
T ss_pred -HHHHhCCCCEEEEEE
Confidence 689999999999876
No 308
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=96.71 E-value=0.0017 Score=58.64 Aligned_cols=115 Identities=10% Similarity=0.048 Sum_probs=75.8
Q ss_pred CCCCeEEEEeccchHHHHHHHhc----------------CCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcc
Q 025141 101 PNPKTIFIMGGGEGSTAREILRH----------------KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVIND 164 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~----------------~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~D 164 (257)
+++-+|+|+||++|..+..+... ++.-+|...|+-..-....-+.++... ...+-.++.+.
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~---~~~~~~f~~gv 126 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEN---DVDGVCFINGV 126 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSC---SCTTCEEEEEE
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhc---ccCCCEEEEec
Confidence 45678999999999755432221 334578888998887777776655211 11144677778
Q ss_pred hHHHHhc--CCCceeEEEEcCCCCCCCCccc--------------------CCch-------HHHHHHHHcCcCCCCcEE
Q 025141 165 ARAELES--RKESYDVIIGDLADPIEGGPCY--------------------KLYT-------KSFYEFVVKPRLNPEGIF 215 (257)
Q Consensus 165 a~~~l~~--~~~~fDvIi~D~~~~~~~~p~~--------------------~L~t-------~ef~~~~~~~~L~pgGil 215 (257)
+..|-.. +.+.+|+|++...-+|-...+. ..|. ..|++. -++.|+|||.+
T Consensus 127 pgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~-Ra~EL~pGG~m 205 (359)
T 1m6e_X 127 PGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRC-RAQEVVPGGRM 205 (359)
T ss_dssp ESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHH-HHHHBCTTCEE
T ss_pred chhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCceE
Confidence 7777644 4588999999988666322111 1332 245665 58999999999
Q ss_pred EEec
Q 025141 216 VTQA 219 (257)
Q Consensus 216 ~~~~ 219 (257)
++..
T Consensus 206 vl~~ 209 (359)
T 1m6e_X 206 VLTI 209 (359)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9875
No 309
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.52 E-value=0.0037 Score=55.25 Aligned_cols=98 Identities=14% Similarity=0.148 Sum_probs=66.3
Q ss_pred CCCCeEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025141 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (257)
Q Consensus 101 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvI 179 (257)
.+.++||++|+|+ |.++.++++..+. +|++++.+++-.+.+++.-. +.-+.....|..+.+++..+.+|+|
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa-------~~~i~~~~~~~~~~~~~~~g~~d~v 236 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGA-------EVAVNARDTDPAAWLQKEIGGAHGV 236 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTC-------SEEEETTTSCHHHHHHHHHSSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCC-------CEEEeCCCcCHHHHHHHhCCCCCEE
Confidence 3568999999875 7788888887764 99999999999999887421 1001111135555555433579999
Q ss_pred EEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+..... .+.++. +.+.|+++|.++.-.
T Consensus 237 id~~g~------------~~~~~~-~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 237 LVTAVS------------PKAFSQ-AIGMVRRGGTIALNG 263 (340)
T ss_dssp EESSCC------------HHHHHH-HHHHEEEEEEEEECS
T ss_pred EEeCCC------------HHHHHH-HHHHhccCCEEEEeC
Confidence 865421 234566 577899999988643
No 310
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.42 E-value=0.0062 Score=54.51 Aligned_cols=98 Identities=13% Similarity=0.124 Sum_probs=63.5
Q ss_pred CCCCeEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-CCCceeE
Q 025141 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYDV 178 (257)
Q Consensus 101 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~-~~~~fDv 178 (257)
.+.++||++|+|+ |.++.++++..+..+|++++.+++-.+.+++.-. +.-+.....|..+.+++ ..+.+|+
T Consensus 189 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa-------~~vi~~~~~~~~~~~~~~~~gg~D~ 261 (371)
T 1f8f_A 189 TPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGA-------THVINSKTQDPVAAIKEITDGGVNF 261 (371)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTC-------SEEEETTTSCHHHHHHHHTTSCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCC-------CEEecCCccCHHHHHHHhcCCCCcE
Confidence 3468999999876 6677788876665589999999999999886421 00011011243444433 3347999
Q ss_pred EEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
|+-... . .+.++. +.+.|+++|.++.-
T Consensus 262 vid~~g-----~-------~~~~~~-~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 262 ALESTG-----S-------PEILKQ-GVDALGILGKIAVV 288 (371)
T ss_dssp EEECSC-----C-------HHHHHH-HHHTEEEEEEEEEC
T ss_pred EEECCC-----C-------HHHHHH-HHHHHhcCCEEEEe
Confidence 985432 1 234566 57899999998864
No 311
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.42 E-value=0.021 Score=50.76 Aligned_cols=98 Identities=14% Similarity=0.084 Sum_probs=65.7
Q ss_pred CCCCeEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEE-----EcchHHHHhc-C-
Q 025141 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELV-----INDARAELES-R- 172 (257)
Q Consensus 101 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~-----~~Da~~~l~~-~- 172 (257)
.+.++||++|+|+ |.++.++++..+..+|++++.+++-.+.+++. . . .-+... ..|..+.+++ +
T Consensus 178 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~-~------~~~~~~~~~~~~~~~~~~v~~~t~ 249 (363)
T 3m6i_A 178 RLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-C-P------EVVTHKVERLSAEESAKKIVESFG 249 (363)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-C-T------TCEEEECCSCCHHHHHHHHHHHTS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-c-h------hcccccccccchHHHHHHHHHHhC
Confidence 4568999999865 66778888877765699999999999999986 2 1 112222 1334444433 2
Q ss_pred CCceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 173 KESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 173 ~~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
...+|+|+-... . .+.++. +.+.|+++|.++.-.
T Consensus 250 g~g~Dvvid~~g-----~-------~~~~~~-~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 250 GIEPAVALECTG-----V-------ESSIAA-AIWAVKFGGKVFVIG 283 (363)
T ss_dssp SCCCSEEEECSC-----C-------HHHHHH-HHHHSCTTCEEEECC
T ss_pred CCCCCEEEECCC-----C-------hHHHHH-HHHHhcCCCEEEEEc
Confidence 357999985432 1 234556 577899999998643
No 312
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.38 E-value=0.023 Score=49.90 Aligned_cols=123 Identities=12% Similarity=0.107 Sum_probs=81.7
Q ss_pred eEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEEEcCC
Q 025141 105 TIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDLA 184 (257)
Q Consensus 105 ~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~D~~ 184 (257)
+|+++-||.|++..-+.+. +...+.++|+|+...+.-+.+++ -+++.+|..+.-...-.+.|+|+.-++
T Consensus 2 kvidLFsG~GG~~~G~~~a-G~~~v~a~e~d~~a~~ty~~N~~----------~~~~~~DI~~i~~~~~~~~D~l~ggpP 70 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKA-GFRIICANEYDKSIWKTYESNHS----------AKLIKGDISKISSDEFPKCDGIIGGPP 70 (331)
T ss_dssp EEEEESCTTCHHHHHHHHT-TCEEEEEEECCTTTHHHHHHHCC----------SEEEESCGGGCCGGGSCCCSEEECCCC
T ss_pred eEEEeCcCccHHHHHHHHC-CCEEEEEEeCCHHHHHHHHHHCC----------CCcccCChhhCCHhhCCcccEEEecCC
Confidence 7999999999998877664 56678899999999999888764 156788877754333367899988776
Q ss_pred C-CCC--------CCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhh
Q 025141 185 D-PIE--------GGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV 241 (257)
Q Consensus 185 ~-~~~--------~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~ 241 (257)
- +.+ ..+...| -.++++. -+.++|.-+++=|+..-......+.+..+++.|.+.
T Consensus 71 CQ~fS~ag~~~g~~d~R~~L-~~~~~r~--i~~~~Pk~~~~ENV~gl~~~~~~~~~~~i~~~l~~~ 133 (331)
T 3ubt_Y 71 SQSWSEGGSLRGIDDPRGKL-FYEYIRI--LKQKKPIFFLAENVKGMMAQRHNKAVQEFIQEFDNA 133 (331)
T ss_dssp GGGTEETTEECCTTCGGGHH-HHHHHHH--HHHHCCSEEEEEECCGGGGCTTSHHHHHHHHHHHHH
T ss_pred CCCcCCCCCccCCCCchhHH-HHHHHHH--HhccCCeEEEeeeecccccccccchhhhhhhhhccC
Confidence 2 111 1121123 2466664 356899877765652110012346778888888765
No 313
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=96.30 E-value=0.042 Score=48.85 Aligned_cols=123 Identities=16% Similarity=0.186 Sum_probs=80.1
Q ss_pred CeEEEEeccchHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcC--CCceeEEE
Q 025141 104 KTIFIMGGGEGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR--KESYDVII 180 (257)
Q Consensus 104 ~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~--~~~fDvIi 180 (257)
-+++++.||.|++..-+.+.. +...|.++|+|+...+..+.+++. ..++.+|..+..... ...+|+|+
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~---------~~~~~~DI~~~~~~~~~~~~~D~l~ 74 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE---------TNLLNRNIQQLTPQVIKKWNVDTIL 74 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT---------SCEECCCGGGCCHHHHHHTTCCEEE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC---------CceeccccccCCHHHhccCCCCEEE
Confidence 479999999999998877642 125688999999999999988752 235667766543221 13699999
Q ss_pred EcCCC-CCC--------CCcccCCchHHHHHHHHcCcCC-CCcEEEEecCCCCCCCChHHHHHHHHHHhhh
Q 025141 181 GDLAD-PIE--------GGPCYKLYTKSFYEFVVKPRLN-PEGIFVTQAGPAGIFSHTEVFSCIYNTLRQV 241 (257)
Q Consensus 181 ~D~~~-~~~--------~~p~~~L~t~ef~~~~~~~~L~-pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~ 241 (257)
..++- +.+ ..+...|+ .++++. + +.++ |.-+++=|.. + +.....+..+.+.|++.
T Consensus 75 ggpPCQ~fS~ag~~~~~~d~r~~L~-~~~~r~-i-~~~~~P~~~vlENV~--g-l~~~~~~~~i~~~l~~~ 139 (333)
T 4h0n_A 75 MSPPCQPFTRNGKYLDDNDPRTNSF-LYLIGI-L-DQLDNVDYILMENVK--G-FENSTVRNLFIDKLKEC 139 (333)
T ss_dssp ECCCCCCSEETTEECCTTCTTSCCH-HHHHHH-G-GGCTTCCEEEEEECT--T-GGGSHHHHHHHHHHHHT
T ss_pred ecCCCcchhhhhhccCCcCcccccH-HHHHHH-H-HHhcCCCEEEEecch--h-hhhhhHHHHHHHHHHhC
Confidence 98872 111 11222343 567775 4 4565 9877766652 2 23345577788888764
No 314
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.27 E-value=0.036 Score=49.23 Aligned_cols=95 Identities=14% Similarity=0.128 Sum_probs=62.2
Q ss_pred CCCCeEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEE------cchHHHHhc-C
Q 025141 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVI------NDARAELES-R 172 (257)
Q Consensus 101 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~------~Da~~~l~~-~ 172 (257)
.+.++||++|+|+ |.++.++++..+..+|++++.+++-.+.+++.-. + .++. .|..+-++. .
T Consensus 170 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa-------~---~vi~~~~~~~~~~~~~i~~~~ 239 (356)
T 1pl8_A 170 TLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGA-------D---LVLQISKESPQEIARKVEGQL 239 (356)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC-------S---EEEECSSCCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC-------C---EEEcCcccccchHHHHHHHHh
Confidence 4568999999875 6677788887665589999999998898886411 1 1121 222223322 2
Q ss_pred CCceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 173 KESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 173 ~~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
.+.+|+|+-... . .+.++. +.+.|+++|.++.-
T Consensus 240 ~~g~D~vid~~g-----~-------~~~~~~-~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 240 GCKPEVTIECTG-----A-------EASIQA-GIYATRSGGTLVLV 272 (356)
T ss_dssp TSCCSEEEECSC-----C-------HHHHHH-HHHHSCTTCEEEEC
T ss_pred CCCCCEEEECCC-----C-------hHHHHH-HHHHhcCCCEEEEE
Confidence 357999985432 1 133455 56789999998864
No 315
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=96.19 E-value=0.044 Score=51.25 Aligned_cols=129 Identities=16% Similarity=0.146 Sum_probs=84.8
Q ss_pred CCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHh------------
Q 025141 103 PKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELE------------ 170 (257)
Q Consensus 103 ~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~------------ 170 (257)
.-+++++-||.|++..-+.+. +...|.++|+|+...+.-+.++.. .|...++.+|.+++..
T Consensus 88 ~~~viDLFaG~GGlslG~~~a-G~~~v~avE~d~~A~~ty~~N~~~------~p~~~~~~~DI~~i~~~~~~~~~~~~~~ 160 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI-GGQCVFTSEWNKHAVRTYKANHYC------DPATHHFNEDIRDITLSHQEGVSDEAAA 160 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT-TEEEEEEECCCHHHHHHHHHHSCC------CTTTCEEESCTHHHHCTTCTTSCHHHHH
T ss_pred cceEEEecCCccHHHHHHHHC-CCEEEEEEeCCHHHHHHHHHhccc------CCCcceeccchhhhhhccccccchhhHH
Confidence 358999999999999888774 556689999999999998887742 3456678899988752
Q ss_pred ----cCCCceeEEEEcCCC-CCC-CC----------------cccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCCh
Q 025141 171 ----SRKESYDVIIGDLAD-PIE-GG----------------PCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHT 228 (257)
Q Consensus 171 ----~~~~~fDvIi~D~~~-~~~-~~----------------p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~ 228 (257)
.....+|+|+..+|- +.+ .+ +...| -.++++. + +.++|.-+++=|+..-......
T Consensus 161 ~~i~~~~~~~Dvl~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~~L-f~e~~ri-I-~~~rPk~fvlENV~gl~s~~~g 237 (482)
T 3me5_A 161 EHIRQHIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTL-FFDVVRI-I-DARRPAMFVLENVKNLKSHDKG 237 (482)
T ss_dssp HHHHHHSCCCSEEEEECCCCCC------------------CTTTTSH-HHHHHHH-H-HHHCCSEEEEEEETTTTTGGGG
T ss_pred hhhhhcCCCCCEEEecCCCcchhhhCcccccccccccccccCccccH-HHHHHHH-H-HHcCCcEEEEeCcHHHhcccCC
Confidence 122568999988873 221 01 11122 2466664 3 4678987776665321101224
Q ss_pred HHHHHHHHHHhhh
Q 025141 229 EVFSCIYNTLRQV 241 (257)
Q Consensus 229 ~~~~~~~~~l~~~ 241 (257)
..+..+++.|.+.
T Consensus 238 ~~f~~i~~~L~~l 250 (482)
T 3me5_A 238 KTFRIIMQTLDEL 250 (482)
T ss_dssp HHHHHHHHHHHHT
T ss_pred cHHHHHHHHHhcC
Confidence 5677888888764
No 316
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.15 E-value=0.0077 Score=53.49 Aligned_cols=98 Identities=10% Similarity=0.099 Sum_probs=63.7
Q ss_pred CCCCeEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-CC-Ccee
Q 025141 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RK-ESYD 177 (257)
Q Consensus 101 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~-~~-~~fD 177 (257)
.+.++||++|+|+ |.++.++++..+..+|++++.+++-.+.+++.-. +.-+.....|..+.+++ +. ..+|
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa-------~~vi~~~~~~~~~~v~~~t~g~g~D 237 (352)
T 3fpc_A 165 KLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGA-------TDIINYKNGDIVEQILKATDGKGVD 237 (352)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTC-------CEEECGGGSCHHHHHHHHTTTCCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCC-------ceEEcCCCcCHHHHHHHHcCCCCCC
Confidence 4568999999875 6677888887775589999999998899887521 10011112344454443 33 4699
Q ss_pred EEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 178 vIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
+|+-.... + +.++. +.+.|+++|.++.-
T Consensus 238 ~v~d~~g~-----~-------~~~~~-~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 238 KVVIAGGD-----V-------HTFAQ-AVKMIKPGSDIGNV 265 (352)
T ss_dssp EEEECSSC-----T-------THHHH-HHHHEEEEEEEEEC
T ss_pred EEEECCCC-----h-------HHHHH-HHHHHhcCCEEEEe
Confidence 99854321 1 23455 56789999998854
No 317
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.15 E-value=0.02 Score=51.27 Aligned_cols=99 Identities=14% Similarity=0.153 Sum_probs=66.1
Q ss_pred CCCCeEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc----CCCc
Q 025141 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES----RKES 175 (257)
Q Consensus 101 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~----~~~~ 175 (257)
.+.++||++|+|+ |.++.++++..+..+|++++.+++-.+.+++. ... .-+.....|..+.++. +.+.
T Consensus 181 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-Ga~------~vi~~~~~~~~~~i~~~~~~~~gg 253 (370)
T 4ej6_A 181 KAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV-GAT------ATVDPSAGDVVEAIAGPVGLVPGG 253 (370)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH-TCS------EEECTTSSCHHHHHHSTTSSSTTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc-CCC------EEECCCCcCHHHHHHhhhhccCCC
Confidence 4568999999865 66777888877766999999999999998874 211 0011112355555543 3358
Q ss_pred eeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 176 YDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 176 fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+|+|+-... . .+.++. +.+.|+++|.++.-.
T Consensus 254 ~Dvvid~~G-----~-------~~~~~~-~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 254 VDVVIECAG-----V-------AETVKQ-STRLAKAGGTVVILG 284 (370)
T ss_dssp EEEEEECSC-----C-------HHHHHH-HHHHEEEEEEEEECS
T ss_pred CCEEEECCC-----C-------HHHHHH-HHHHhccCCEEEEEe
Confidence 999985432 1 234566 577899999988643
No 318
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.09 E-value=0.011 Score=50.38 Aligned_cols=47 Identities=19% Similarity=0.172 Sum_probs=41.3
Q ss_pred CCCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhh
Q 025141 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVV 148 (257)
Q Consensus 100 ~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~ 148 (257)
..+...|||..||+|+++.++.+.. .+++++|+++..++.+++++..
T Consensus 210 ~~~~~~vlD~f~GsGtt~~~a~~~g--r~~ig~e~~~~~~~~~~~r~~~ 256 (260)
T 1g60_A 210 SNPNDLVLDCFMGSGTTAIVAKKLG--RNFIGCDMNAEYVNQANFVLNQ 256 (260)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHC
T ss_pred CCCCCEEEECCCCCCHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHHHh
Confidence 3566789999999999999999863 6999999999999999998753
No 319
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.00 E-value=0.042 Score=49.18 Aligned_cols=94 Identities=20% Similarity=0.251 Sum_probs=60.4
Q ss_pred CCCCeEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025141 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (257)
Q Consensus 101 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvI 179 (257)
.+.++||++|+|+ |.++.++++..+ .+|++++.+++-.+.+++. ... .++..+-.++++...+.+|+|
T Consensus 193 ~~g~~VlV~GaG~vG~~aiqlak~~G-a~Vi~~~~~~~~~~~a~~l-Ga~---------~vi~~~~~~~~~~~~~g~Dvv 261 (369)
T 1uuf_A 193 GPGKKVGVVGIGGLGHMGIKLAHAMG-AHVVAFTTSEAKREAAKAL-GAD---------EVVNSRNADEMAAHLKSFDFI 261 (369)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESSGGGHHHHHHH-TCS---------EEEETTCHHHHHTTTTCEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc-CCc---------EEeccccHHHHHHhhcCCCEE
Confidence 3468999999875 667778887766 4799999999988888863 211 112111123343333679999
Q ss_pred EEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
+-....+. .++. +.+.|+++|.++.-
T Consensus 262 id~~g~~~------------~~~~-~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 262 LNTVAAPH------------NLDD-FTTLLKRDGTMTLV 287 (369)
T ss_dssp EECCSSCC------------CHHH-HHTTEEEEEEEEEC
T ss_pred EECCCCHH------------HHHH-HHHHhccCCEEEEe
Confidence 85443210 1344 56789999988754
No 320
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=95.97 E-value=0.0066 Score=51.90 Aligned_cols=62 Identities=11% Similarity=0.094 Sum_probs=43.7
Q ss_pred CeEEEEcchHHHHhcCC-CceeEEEEcCCCCCCCCcccCC--------chHHHHHHHHcCcCCCCcEEEEec
Q 025141 157 RLELVINDARAELESRK-ESYDVIIGDLADPIEGGPCYKL--------YTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 157 rv~i~~~Da~~~l~~~~-~~fDvIi~D~~~~~~~~p~~~L--------~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
..+++++|++++++... +++|+|++|||-.......... +..++++. ++++|+|+|.++++.
T Consensus 4 ~~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~-~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 4 INKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDK-VLDKLDKDGSLYIFN 74 (260)
T ss_dssp SSSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHH-HHHHEEEEEEEEEEE
T ss_pred cCeEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHH-HHHHhcCCeEEEEEc
Confidence 45789999999998744 6899999999732210000011 34567777 689999999998874
No 321
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=95.87 E-value=0.018 Score=50.81 Aligned_cols=98 Identities=14% Similarity=0.213 Sum_probs=63.7
Q ss_pred CCCCeEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-C-CCcee
Q 025141 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-R-KESYD 177 (257)
Q Consensus 101 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~-~-~~~fD 177 (257)
.+.++||++|+|+ |.++.++++..+..+|++++.+++-.+.+++.-. + .+--...|..+.+++ + ...+|
T Consensus 170 ~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa-------~-~~i~~~~~~~~~v~~~t~g~g~d 241 (345)
T 3jv7_A 170 GPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGA-------D-AAVKSGAGAADAIRELTGGQGAT 241 (345)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTC-------S-EEEECSTTHHHHHHHHHGGGCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCC-------C-EEEcCCCcHHHHHHHHhCCCCCe
Confidence 4568999999865 6677777776545799999999999999987421 1 111111233444433 2 24799
Q ss_pred EEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 178 vIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+|+-... . .+.++. +.+.|+++|.++.-.
T Consensus 242 ~v~d~~G-----~-------~~~~~~-~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 242 AVFDFVG-----A-------QSTIDT-AQQVVAVDGHISVVG 270 (345)
T ss_dssp EEEESSC-----C-------HHHHHH-HHHHEEEEEEEEECS
T ss_pred EEEECCC-----C-------HHHHHH-HHHHHhcCCEEEEEC
Confidence 9885432 1 234566 577899999988643
No 322
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.84 E-value=0.0091 Score=52.82 Aligned_cols=67 Identities=24% Similarity=0.294 Sum_probs=47.4
Q ss_pred CCCCeEEEEcchHHHHhcC-CCceeEEEEcCCCCCCCCcc-cC-------CchHHHHHHHHcCcCCCCcEEEEecCC
Q 025141 154 SDPRLELVINDARAELESR-KESYDVIIGDLADPIEGGPC-YK-------LYTKSFYEFVVKPRLNPEGIFVTQAGP 221 (257)
Q Consensus 154 ~~~rv~i~~~Da~~~l~~~-~~~fDvIi~D~~~~~~~~p~-~~-------L~t~ef~~~~~~~~L~pgGil~~~~~~ 221 (257)
...+.+++++|+++.++.. .+++|+|++|||-.....-. .. -+..+.++. ++++|+|||.++++.+.
T Consensus 11 ~~~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~-~~rvLk~~G~i~i~~~d 86 (323)
T 1boo_A 11 TTSNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKV-VNKKLKPDGSFVVDFGG 86 (323)
T ss_dssp ECSSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHH-HHHHEEEEEEEEEEECC
T ss_pred ecCCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHH-HHHHCcCCcEEEEEECC
Confidence 4568899999999998764 46899999999732210000 00 123567777 68999999999998753
No 323
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=95.75 E-value=0.056 Score=47.95 Aligned_cols=137 Identities=17% Similarity=0.175 Sum_probs=81.3
Q ss_pred CCCeEEEEeccchHHHHHHHhcC-CCcEE-EEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc--CCCcee
Q 025141 102 NPKTIFIMGGGEGSTAREILRHK-TVEKV-VMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES--RKESYD 177 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~-~~~~v-~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~--~~~~fD 177 (257)
++-+++++.||.|++..-+.+.. +...+ .++|+|+...+..+.+++.. ++.+|..+.-.. ....+|
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~----------~~~~DI~~~~~~~i~~~~~D 78 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE----------VQVKNLDSISIKQIESLNCN 78 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC----------CBCCCTTTCCHHHHHHTCCC
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC----------cccCChhhcCHHHhccCCCC
Confidence 45689999999999998887742 13567 79999999999999987521 334555443211 012689
Q ss_pred EEEEcCCC-CC--C--------CCcccCCchHHHHHHHHcCcC--CCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCc
Q 025141 178 VIIGDLAD-PI--E--------GGPCYKLYTKSFYEFVVKPRL--NPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKC 244 (257)
Q Consensus 178 vIi~D~~~-~~--~--------~~p~~~L~t~ef~~~~~~~~L--~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~F~~ 244 (257)
+|+..++- +. + ..+...| -.++++. +-+.+ +|.-+++=|.. + +...+.+..+.+.|++.-=.
T Consensus 79 il~ggpPCQ~fs~S~ag~~~~~~d~r~~L-~~~~~r~-~i~~~~~~P~~~~lENV~--g-l~~~~~~~~i~~~l~~~GY~ 153 (327)
T 3qv2_A 79 TWFMSPPCQPYNNSIMSKHKDINDPRAKS-VLHLYRD-ILPYLINKPKHIFIENVP--L-FKESLVFKEIYNILIKNQYY 153 (327)
T ss_dssp EEEECCCCTTCSHHHHTTTCTTTCGGGHH-HHHHHHT-TGGGCSSCCSEEEEEECG--G-GGGSHHHHHHHHHHHHTTCE
T ss_pred EEEecCCccCcccccCCCCCCCccccchh-HHHHHHH-HHHHhccCCCEEEEEchh--h-hcChHHHHHHHHHHHhCCCE
Confidence 99998873 22 1 0111111 1345551 12355 68766665652 2 23345677888888765323
Q ss_pred eEEEeecCc
Q 025141 245 GCCALFSSY 253 (257)
Q Consensus 245 v~~~~~~~~ 253 (257)
+........
T Consensus 154 v~~~vl~a~ 162 (327)
T 3qv2_A 154 IKDIICSPI 162 (327)
T ss_dssp EEEEEECGG
T ss_pred EEEEEEeHH
Confidence 333333333
No 324
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=95.66 E-value=0.05 Score=47.83 Aligned_cols=99 Identities=18% Similarity=0.156 Sum_probs=64.1
Q ss_pred CCCCeEEEEeccchH-HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-C-CCcee
Q 025141 101 PNPKTIFIMGGGEGS-TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-R-KESYD 177 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~-~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~-~-~~~fD 177 (257)
.+.++||++|+|+++ ++..++++....+|++++.+++-.+.+++.-. +.-+.....|..+.+++ + ...+|
T Consensus 162 ~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga-------~~~i~~~~~~~~~~v~~~t~g~g~d 234 (348)
T 4eez_A 162 KPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGA-------DVTINSGDVNPVDEIKKITGGLGVQ 234 (348)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTC-------SEEEEC-CCCHHHHHHHHTTSSCEE
T ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCC-------eEEEeCCCCCHHHHhhhhcCCCCce
Confidence 456899999998654 45555654445799999999998888887532 11222233455555544 2 34688
Q ss_pred EEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 178 vIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
.++.+... .+.+.. ..+.|+++|.++.-.
T Consensus 235 ~~~~~~~~------------~~~~~~-~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 235 SAIVCAVA------------RIAFEQ-AVASLKPMGKMVAVA 263 (348)
T ss_dssp EEEECCSC------------HHHHHH-HHHTEEEEEEEEECC
T ss_pred EEEEeccC------------cchhhe-eheeecCCceEEEEe
Confidence 88876532 233455 467899999887643
No 325
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.61 E-value=0.02 Score=51.77 Aligned_cols=109 Identities=14% Similarity=0.131 Sum_probs=64.5
Q ss_pred CCCCeEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcch-HHHHhc-C-CCce
Q 025141 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDA-RAELES-R-KESY 176 (257)
Q Consensus 101 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da-~~~l~~-~-~~~f 176 (257)
...++||++|+|+ |.++.++++..+..+|++++.+++-.+.++++ ... -+.....|. .+.++. + ...+
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-Ga~-------~i~~~~~~~~~~~~~~~~~g~g~ 255 (398)
T 2dph_A 184 KPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDA-GFE-------TIDLRNSAPLRDQIDQILGKPEV 255 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTT-TCE-------EEETTSSSCHHHHHHHHHSSSCE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc-CCc-------EEcCCCcchHHHHHHHHhCCCCC
Confidence 3468999999876 77788888866655899999999999988864 110 111111232 333432 2 2369
Q ss_pred eEEEEcCCCCCCCC-c-ccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 177 DVIIGDLADPIEGG-P-CYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 177 DvIi~D~~~~~~~~-p-~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
|+||-....+.... + ..++-....++. +.+.|+++|.+++-
T Consensus 256 Dvvid~~g~~~~~~~~~~~~~~~~~~~~~-~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 256 DCGVDAVGFEAHGLGDEANTETPNGALNS-LFDVVRAGGAIGIP 298 (398)
T ss_dssp EEEEECSCTTCBCSGGGTTSBCTTHHHHH-HHHHEEEEEEEECC
T ss_pred CEEEECCCCccccccccccccccHHHHHH-HHHHHhcCCEEEEe
Confidence 99985543211000 0 000111234566 57789999998754
No 326
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.61 E-value=0.023 Score=50.95 Aligned_cols=99 Identities=16% Similarity=0.126 Sum_probs=64.0
Q ss_pred CCCCeEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEE--EcchHHHHhc-CCCce
Q 025141 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELV--INDARAELES-RKESY 176 (257)
Q Consensus 101 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~--~~Da~~~l~~-~~~~f 176 (257)
.+.++||++|+|. |.++.++++..+..+|++++.+++-.+.+++. ... .-+... ..|..+.+++ +.+.+
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~l-Ga~------~vi~~~~~~~~~~~~i~~~~~gg~ 264 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKF-GVN------EFVNPKDHDKPIQEVIVDLTDGGV 264 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTT-TCC------EEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc-CCc------EEEccccCchhHHHHHHHhcCCCC
Confidence 3468999999864 66777778776655899999999999998864 110 000000 1344444543 33589
Q ss_pred eEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCC-cEEEEec
Q 025141 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPE-GIFVTQA 219 (257)
Q Consensus 177 DvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pg-Gil~~~~ 219 (257)
|+|+-... . .+.++. +.+.|+++ |.++.-.
T Consensus 265 D~vid~~g-----~-------~~~~~~-~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 265 DYSFECIG-----N-------VSVMRA-ALECCHKGWGTSVIVG 295 (378)
T ss_dssp SEEEECSC-----C-------HHHHHH-HHHTBCTTTCEEEECS
T ss_pred CEEEECCC-----C-------HHHHHH-HHHHhhccCCEEEEEc
Confidence 99985432 1 244566 57799996 9888643
No 327
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.53 E-value=0.069 Score=47.20 Aligned_cols=97 Identities=13% Similarity=0.094 Sum_probs=60.9
Q ss_pred CCCCeEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEE-cchHHHHhc-C----C
Q 025141 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVI-NDARAELES-R----K 173 (257)
Q Consensus 101 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~-~Da~~~l~~-~----~ 173 (257)
.+.++||++|+|+ |..+.++++..+. +|++++.+++-.+.+++.-. +.-+.... .|..+.+.. . .
T Consensus 167 ~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa-------~~~~~~~~~~~~~~~i~~~~~~~~g 238 (352)
T 1e3j_A 167 QLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGA-------DVTLVVDPAKEEESSIIERIRSAIG 238 (352)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTC-------SEEEECCTTTSCHHHHHHHHHHHSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCC-------CEEEcCcccccHHHHHHHHhccccC
Confidence 4568999999865 6667777776664 69999999999998886421 10011110 233333332 2 3
Q ss_pred CceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 174 ESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 174 ~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
..+|+|+-.... ...++. +.+.|+++|.++.-
T Consensus 239 ~g~D~vid~~g~------------~~~~~~-~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 239 DLPNVTIDCSGN------------EKCITI-GINITRTGGTLMLV 270 (352)
T ss_dssp SCCSEEEECSCC------------HHHHHH-HHHHSCTTCEEEEC
T ss_pred CCCCEEEECCCC------------HHHHHH-HHHHHhcCCEEEEE
Confidence 569999854321 123455 56789999998864
No 328
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.52 E-value=0.016 Score=50.48 Aligned_cols=67 Identities=22% Similarity=0.129 Sum_probs=43.6
Q ss_pred CCCCCeEEEEcchHHHHhcC-CCceeEEEEcCCCCCC--CCc-ccCC--------c---hHHHHHHHHcCcCCCCcEEEE
Q 025141 153 FSDPRLELVINDARAELESR-KESYDVIIGDLADPIE--GGP-CYKL--------Y---TKSFYEFVVKPRLNPEGIFVT 217 (257)
Q Consensus 153 ~~~~rv~i~~~Da~~~l~~~-~~~fDvIi~D~~~~~~--~~p-~~~L--------~---t~ef~~~~~~~~L~pgGil~~ 217 (257)
+...+++++++|++++++.. +++||+|++|+|-... ... ...+ + -.+++++ ++++|+|||.+++
T Consensus 17 ~~~~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~-~~rvLk~~G~l~i 95 (297)
T 2zig_A 17 VSFGVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWRE-VFRLLVPGGRLVI 95 (297)
T ss_dssp ----CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHH-HHHHEEEEEEEEE
T ss_pred ccccCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHH-HHHHcCCCcEEEE
Confidence 34568899999999998764 4789999999973110 000 0000 1 1345677 6899999999998
Q ss_pred ecC
Q 025141 218 QAG 220 (257)
Q Consensus 218 ~~~ 220 (257)
+.+
T Consensus 96 ~~~ 98 (297)
T 2zig_A 96 VVG 98 (297)
T ss_dssp EEC
T ss_pred EEC
Confidence 865
No 329
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=95.42 E-value=0.041 Score=49.58 Aligned_cols=108 Identities=12% Similarity=0.159 Sum_probs=64.9
Q ss_pred CCCCeEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcc-hHHHHhc-C-CCce
Q 025141 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVIND-ARAELES-R-KESY 176 (257)
Q Consensus 101 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~D-a~~~l~~-~-~~~f 176 (257)
...++||++|+|+ |.++.++++..+..+|++++.+++-.+.+++. .. + -+.....| ..+.+++ + ...+
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~l-Ga------~-~i~~~~~~~~~~~v~~~t~g~g~ 255 (398)
T 1kol_A 184 GPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ-GF------E-IADLSLDTPLHEQIAALLGEPEV 255 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT-TC------E-EEETTSSSCHHHHHHHHHSSSCE
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHc-CC------c-EEccCCcchHHHHHHHHhCCCCC
Confidence 3468999999865 66788888877656899999999999999864 11 0 01100112 3334433 2 3479
Q ss_pred eEEEEcCCCCCCCCc----ccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 177 DVIIGDLADPIEGGP----CYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 177 DvIi~D~~~~~~~~p----~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
|+||-....+.. .. ..+....+.++. +.+.|+++|.+++-
T Consensus 256 Dvvid~~G~~~~-~~~~~~~~~~~~~~~~~~-~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 256 DCAVDAVGFEAR-GHGHEGAKHEAPATVLNS-LMQVTRVAGKIGIP 299 (398)
T ss_dssp EEEEECCCTTCB-CSSTTGGGSBCTTHHHHH-HHHHEEEEEEEEEC
T ss_pred CEEEECCCCccc-ccccccccccchHHHHHH-HHHHHhcCCEEEEe
Confidence 999865432210 00 001112234566 57789999998764
No 330
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=95.41 E-value=0.02 Score=50.86 Aligned_cols=94 Identities=13% Similarity=0.145 Sum_probs=58.4
Q ss_pred CeEEEEeccc-hHHH-HHHH-hcCCCcEEEEEECCHH---HHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCcee
Q 025141 104 KTIFIMGGGE-GSTA-REIL-RHKTVEKVVMCDIDEE---VVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYD 177 (257)
Q Consensus 104 ~~VL~IG~G~-G~~~-~~l~-~~~~~~~v~~VEid~~---vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fD 177 (257)
++||++|+|+ |.++ .+++ +..+..+|++++.+++ -.+.+++. ... .+.....|..+ +++..+.+|
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~l-Ga~-------~v~~~~~~~~~-i~~~~gg~D 244 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEEL-DAT-------YVDSRQTPVED-VPDVYEQMD 244 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHT-TCE-------EEETTTSCGGG-HHHHSCCEE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHc-CCc-------ccCCCccCHHH-HHHhCCCCC
Confidence 8999999743 5567 7888 7766555999999988 77888763 211 01000123333 322123799
Q ss_pred EEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 178 vIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+|+-... . ...++. +.+.|+++|.++.-.
T Consensus 245 vvid~~g-----~-------~~~~~~-~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 245 FIYEATG-----F-------PKHAIQ-SVQALAPNGVGALLG 273 (357)
T ss_dssp EEEECSC-----C-------HHHHHH-HHHHEEEEEEEEECC
T ss_pred EEEECCC-----C-------hHHHHH-HHHHHhcCCEEEEEe
Confidence 9984432 1 123555 567899999988643
No 331
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.40 E-value=0.054 Score=48.32 Aligned_cols=99 Identities=9% Similarity=-0.038 Sum_probs=62.2
Q ss_pred CCCCeEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEE--EcchHHHHhc-CCCce
Q 025141 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELV--INDARAELES-RKESY 176 (257)
Q Consensus 101 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~--~~Da~~~l~~-~~~~f 176 (257)
.+.++||++|+|+ |.++.++++..+..+|++++.+++-.+.+++. ... .-+... ..|..+.+++ +.+.+
T Consensus 190 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-Ga~------~vi~~~~~~~~~~~~i~~~t~gg~ 262 (373)
T 1p0f_A 190 TPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIEL-GAT------ECLNPKDYDKPIYEVICEKTNGGV 262 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHT-TCS------EEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc-CCc------EEEecccccchHHHHHHHHhCCCC
Confidence 3468999999764 55677777766655899999999988888864 210 000000 0234444433 33479
Q ss_pred eEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCC-cEEEEec
Q 025141 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPE-GIFVTQA 219 (257)
Q Consensus 177 DvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pg-Gil~~~~ 219 (257)
|+|+-... . .+.++. +.+.|+++ |.++.-.
T Consensus 263 Dvvid~~g-----~-------~~~~~~-~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 263 DYAVECAG-----R-------IETMMN-ALQSTYCGSGVTVVLG 293 (373)
T ss_dssp SEEEECSC-----C-------HHHHHH-HHHTBCTTTCEEEECC
T ss_pred CEEEECCC-----C-------HHHHHH-HHHHHhcCCCEEEEEc
Confidence 99985432 1 234566 57899999 9988643
No 332
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.38 E-value=0.041 Score=48.65 Aligned_cols=90 Identities=18% Similarity=0.115 Sum_probs=60.4
Q ss_pred CCCCeEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025141 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (257)
Q Consensus 101 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvI 179 (257)
.+.++||++|+|+ |.++.++++..+. +|++++.+++-.+.+++. .. . .++ .|. +.++ +.+|+|
T Consensus 175 ~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~l-Ga--------~-~v~-~~~-~~~~---~~~D~v 238 (348)
T 3two_A 175 TKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSM-GV--------K-HFY-TDP-KQCK---EELDFI 238 (348)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHHT-TC--------S-EEE-SSG-GGCC---SCEEEE
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhc-CC--------C-eec-CCH-HHHh---cCCCEE
Confidence 4568999999875 6677888887664 899999999988888863 21 1 122 332 2222 279999
Q ss_pred EEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+-....+ +.++. +.+.|+++|.++.-.
T Consensus 239 id~~g~~------------~~~~~-~~~~l~~~G~iv~~G 265 (348)
T 3two_A 239 ISTIPTH------------YDLKD-YLKLLTYNGDLALVG 265 (348)
T ss_dssp EECCCSC------------CCHHH-HHTTEEEEEEEEECC
T ss_pred EECCCcH------------HHHHH-HHHHHhcCCEEEEEC
Confidence 8543321 01345 577999999988643
No 333
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.34 E-value=0.013 Score=51.91 Aligned_cols=67 Identities=18% Similarity=0.141 Sum_probs=46.6
Q ss_pred CCCeEEE-EcchHHHHhcCC-CceeEEEEcCCCCCCCC----ccc-CCchHHHHHHHHcCcCCCCcEEEEecCCC
Q 025141 155 DPRLELV-INDARAELESRK-ESYDVIIGDLADPIEGG----PCY-KLYTKSFYEFVVKPRLNPEGIFVTQAGPA 222 (257)
Q Consensus 155 ~~rv~i~-~~Da~~~l~~~~-~~fDvIi~D~~~~~~~~----p~~-~L~t~ef~~~~~~~~L~pgGil~~~~~~~ 222 (257)
+...+++ ++|++++++... +++|+|++|||-..... ... .-+..+.+.. ++++|+|+|.++++.+..
T Consensus 36 ~~~~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~-~~rvLk~~G~i~i~~~~~ 109 (319)
T 1eg2_A 36 GTTRHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAE-AERVLSPTGSIAIFGGLQ 109 (319)
T ss_dssp CCEEEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHH-HHHHEEEEEEEEEEECSC
T ss_pred cccceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHH-HHHHcCCCeEEEEEcCcc
Confidence 3457888 999999998644 68999999997322100 000 0124567777 689999999999987543
No 334
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.28 E-value=0.099 Score=46.58 Aligned_cols=98 Identities=12% Similarity=0.086 Sum_probs=61.9
Q ss_pred CCCeEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEE--EcchHHHHhc-CCCcee
Q 025141 102 NPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELV--INDARAELES-RKESYD 177 (257)
Q Consensus 102 ~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~--~~Da~~~l~~-~~~~fD 177 (257)
+.++||++|+|+ |..+.++++..+..+|++++.+++-.+.+++. ... .-+... ..|..+.++. ..+.+|
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l-Ga~------~vi~~~~~~~~~~~~~~~~~~~g~D 264 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVF-GAT------DFVNPNDHSEPISQVLSKMTNGGVD 264 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT-TCC------EEECGGGCSSCHHHHHHHHHTSCBS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHh-CCc------eEEeccccchhHHHHHHHHhCCCCC
Confidence 458999999764 56677777776655899999999999988864 110 000000 0233344432 234799
Q ss_pred EEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCC-cEEEEec
Q 025141 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPE-GIFVTQA 219 (257)
Q Consensus 178 vIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pg-Gil~~~~ 219 (257)
+|+-... . .+.++. +.+.|+++ |.++.-.
T Consensus 265 ~vid~~g-----~-------~~~~~~-~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 265 FSLECVG-----N-------VGVMRN-ALESCLKGWGVSVLVG 294 (374)
T ss_dssp EEEECSC-----C-------HHHHHH-HHHTBCTTTCEEEECS
T ss_pred EEEECCC-----C-------HHHHHH-HHHHhhcCCcEEEEEc
Confidence 9985432 1 234566 57899999 9988643
No 335
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.25 E-value=0.11 Score=46.26 Aligned_cols=94 Identities=12% Similarity=0.091 Sum_probs=61.2
Q ss_pred CCCCeEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEE---cchHHHHhc--CCC
Q 025141 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVI---NDARAELES--RKE 174 (257)
Q Consensus 101 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~---~Da~~~l~~--~~~ 174 (257)
...++||++|+|+ |..+.++++..+ .+|++++.+++-.+.+++. .. + .++. .|..+.++. ...
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~l-Ga------~---~vi~~~~~~~~~~v~~~~~g~ 256 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKATG-AEVIVTSSSREKLDRAFAL-GA------D---HGINRLEEDWVERVYALTGDR 256 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHH-TC------S---EEEETTTSCHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcC-CEEEEEecCchhHHHHHHc-CC------C---EEEcCCcccHHHHHHHHhCCC
Confidence 3468999999765 666777788766 4899999999998888874 11 1 1111 234444433 234
Q ss_pred ceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 175 SYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 175 ~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
.+|+|+-... + . .++. +.+.|+++|.++.-.
T Consensus 257 g~D~vid~~g-~----~--------~~~~-~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 257 GADHILEIAG-G----A--------GLGQ-SLKAVAPDGRISVIG 287 (363)
T ss_dssp CEEEEEEETT-S----S--------CHHH-HHHHEEEEEEEEEEC
T ss_pred CceEEEECCC-h----H--------HHHH-HHHHhhcCCEEEEEe
Confidence 7999986543 1 1 1344 456899999888643
No 336
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.19 E-value=0.047 Score=48.76 Aligned_cols=97 Identities=12% Similarity=0.013 Sum_probs=61.5
Q ss_pred CCCeEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEE--EcchHHHHhc-CCCcee
Q 025141 102 NPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELV--INDARAELES-RKESYD 177 (257)
Q Consensus 102 ~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~--~~Da~~~l~~-~~~~fD 177 (257)
+.++||++|+|. |.++.++++..+..+|++++.+++-.+.+++. ... .-+... ..|..+.+++ ..+.+|
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-Ga~------~vi~~~~~~~~~~~~v~~~~~~g~D 267 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL-GAT------DCLNPRELDKPVQDVITELTAGGVD 267 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT-TCS------EEECGGGCSSCHHHHHHHHHTSCBS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh-CCc------EEEccccccchHHHHHHHHhCCCcc
Confidence 458999999764 55677778776655899999999988888764 111 000000 0234444432 234799
Q ss_pred EEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCC-cEEEEe
Q 025141 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPE-GIFVTQ 218 (257)
Q Consensus 178 vIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pg-Gil~~~ 218 (257)
+|+-... . .+.++. +.+.|+++ |.++.-
T Consensus 268 vvid~~G-----~-------~~~~~~-~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 268 YSLDCAG-----T-------AQTLKA-AVDCTVLGWGSCTVV 296 (376)
T ss_dssp EEEESSC-----C-------HHHHHH-HHHTBCTTTCEEEEC
T ss_pred EEEECCC-----C-------HHHHHH-HHHHhhcCCCEEEEE
Confidence 9985432 1 234566 57799999 998854
No 337
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.09 E-value=0.14 Score=45.68 Aligned_cols=98 Identities=11% Similarity=0.058 Sum_probs=61.7
Q ss_pred CCCCeEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEE--EcchHHHHhc-CCCce
Q 025141 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELV--INDARAELES-RKESY 176 (257)
Q Consensus 101 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~--~~Da~~~l~~-~~~~f 176 (257)
.+.++||++|+|+ |..+.++++..+..+|++++.+++-.+.+++. ... .-+... ..|..+.++. ..+.+
T Consensus 190 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l-Ga~------~vi~~~~~~~~~~~~~~~~~~~g~ 262 (374)
T 2jhf_A 190 TQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV-GAT------ECVNPQDYKKPIQEVLTEMSNGGV 262 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT-TCS------EEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh-CCc------eEecccccchhHHHHHHHHhCCCC
Confidence 3458999999765 56677777776655899999999988888764 110 000000 0234444433 23479
Q ss_pred eEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCC-cEEEEe
Q 025141 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPE-GIFVTQ 218 (257)
Q Consensus 177 DvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pg-Gil~~~ 218 (257)
|+|+-... . .+.++. +.+.|+++ |.++.-
T Consensus 263 D~vid~~g-----~-------~~~~~~-~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 263 DFSFEVIG-----R-------LDTMVT-ALSCCQEAYGVSVIV 292 (374)
T ss_dssp SEEEECSC-----C-------HHHHHH-HHHHBCTTTCEEEEC
T ss_pred cEEEECCC-----C-------HHHHHH-HHHHhhcCCcEEEEe
Confidence 99985432 1 234555 56789999 998864
No 338
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.09 E-value=0.12 Score=46.03 Aligned_cols=98 Identities=10% Similarity=0.073 Sum_probs=61.6
Q ss_pred CCCeEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEE--EcchHHHHhc-CCCcee
Q 025141 102 NPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELV--INDARAELES-RKESYD 177 (257)
Q Consensus 102 ~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~--~~Da~~~l~~-~~~~fD 177 (257)
..++||++|+|+ |.++.++++..+..+|++++.+++-.+.+++. ... .-+... ..|..+.+++ ..+.+|
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~l-Ga~------~vi~~~~~~~~~~~~v~~~~~~g~D 262 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF-GAT------ECINPQDFSKPIQEVLIEMTDGGVD 262 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH-TCS------EEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc-CCc------eEeccccccccHHHHHHHHhCCCCC
Confidence 458999999765 55677777765655899999999998988864 211 000000 0234444433 234799
Q ss_pred EEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCC-cEEEEec
Q 025141 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPE-GIFVTQA 219 (257)
Q Consensus 178 vIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pg-Gil~~~~ 219 (257)
+|+-... . .+.++. +.+.|+++ |.++.-.
T Consensus 263 ~vid~~g-----~-------~~~~~~-~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 263 YSFECIG-----N-------VKVMRA-ALEACHKGWGVSVVVG 292 (373)
T ss_dssp EEEECSC-----C-------HHHHHH-HHHTBCTTTCEEEECS
T ss_pred EEEECCC-----c-------HHHHHH-HHHhhccCCcEEEEEe
Confidence 9985432 1 234566 57799999 9988643
No 339
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=95.06 E-value=0.067 Score=47.49 Aligned_cols=94 Identities=16% Similarity=0.126 Sum_probs=57.6
Q ss_pred CCCCeEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchH-HHHhcCCCceeE
Q 025141 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDAR-AELESRKESYDV 178 (257)
Q Consensus 101 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~-~~l~~~~~~fDv 178 (257)
.+.++||++|+|+ |..+.++++..+. +|++++.+++-.+.+++. .. + .++..+-. ++.+...+.+|+
T Consensus 178 ~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~l-Ga------~---~v~~~~~~~~~~~~~~~~~D~ 246 (360)
T 1piw_A 178 GPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKM-GA------D---HYIATLEEGDWGEKYFDTFDL 246 (360)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHH-TC------S---EEEEGGGTSCHHHHSCSCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHc-CC------C---EEEcCcCchHHHHHhhcCCCE
Confidence 3468999999754 6667777776554 799999999888888863 21 1 11111101 222222257999
Q ss_pred EEEcCCC--CCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 179 IIGDLAD--PIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 179 Ii~D~~~--~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
|+-.... +. . ++. +.+.|+++|.++.-
T Consensus 247 vid~~g~~~~~-------~-----~~~-~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 247 IVVCASSLTDI-------D-----FNI-MPKAMKVGGRIVSI 275 (360)
T ss_dssp EEECCSCSTTC-------C-----TTT-GGGGEEEEEEEEEC
T ss_pred EEECCCCCcHH-------H-----HHH-HHHHhcCCCEEEEe
Confidence 9865432 11 1 123 46788999988753
No 340
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.06 E-value=0.11 Score=39.56 Aligned_cols=94 Identities=15% Similarity=0.190 Sum_probs=58.8
Q ss_pred CCeEEEEeccc-hH-HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHH--HHhcC-CCcee
Q 025141 103 PKTIFIMGGGE-GS-TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA--ELESR-KESYD 177 (257)
Q Consensus 103 ~~~VL~IG~G~-G~-~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~--~l~~~-~~~fD 177 (257)
..+|+++|+|. |. +++.+.+ .+ .+|+++|.|++.++.+++. .+.++.+|+.+ .++.. -++.|
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~-~g-~~v~vid~~~~~~~~~~~~-----------g~~~i~gd~~~~~~l~~a~i~~ad 73 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLA-SD-IPLVVIETSRTRVDELRER-----------GVRAVLGNAANEEIMQLAHLECAK 73 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH-TT-CCEEEEESCHHHHHHHHHT-----------TCEEEESCTTSHHHHHHTTGGGCS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-CC-CCEEEEECCHHHHHHHHHc-----------CCCEEECCCCCHHHHHhcCcccCC
Confidence 36899999985 33 3344444 34 4899999999998877651 35677788743 34433 36799
Q ss_pred EEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 178 vIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+|++..++.. .+..... ..+.+.|+..++...
T Consensus 74 ~vi~~~~~~~--------~n~~~~~--~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 74 WLILTIPNGY--------EAGEIVA--SARAKNPDIEIIARA 105 (140)
T ss_dssp EEEECCSCHH--------HHHHHHH--HHHHHCSSSEEEEEE
T ss_pred EEEEECCChH--------HHHHHHH--HHHHHCCCCeEEEEE
Confidence 9998765321 1111222 245577887777654
No 341
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=94.97 E-value=0.032 Score=44.95 Aligned_cols=96 Identities=18% Similarity=0.144 Sum_probs=58.2
Q ss_pred CCCCeEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-C-CCce
Q 025141 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-R-KESY 176 (257)
Q Consensus 101 ~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~-~-~~~f 176 (257)
.+.++||++|+ |.|..+.++++..+ .+|++++.+++-.+.+++. .. +..+.....|..+.+.+ . ...+
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G-~~V~~~~~~~~~~~~~~~~-g~------~~~~d~~~~~~~~~~~~~~~~~~~ 108 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIG-ARIYTTAGSDAKREMLSRL-GV------EYVGDSRSVDFADEILELTDGYGV 108 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHTT-CC------SEEEETTCSTHHHHHHHHTTTCCE
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHc-CC------CEEeeCCcHHHHHHHHHHhCCCCC
Confidence 34688999994 44556666666545 5899999999888777653 10 10111111233333332 2 2469
Q ss_pred eEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 177 DvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
|+|+.... + +.++. +.+.|+|+|.++.-
T Consensus 109 D~vi~~~g------~-------~~~~~-~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 109 DVVLNSLA------G-------EAIQR-GVQILAPGGRFIEL 136 (198)
T ss_dssp EEEEECCC------T-------HHHHH-HHHTEEEEEEEEEC
T ss_pred eEEEECCc------h-------HHHHH-HHHHhccCCEEEEE
Confidence 99986531 1 23556 57789999998864
No 342
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=94.91 E-value=0.058 Score=47.30 Aligned_cols=97 Identities=24% Similarity=0.244 Sum_probs=62.2
Q ss_pred CCCCeEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-CCCcee
Q 025141 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYD 177 (257)
Q Consensus 101 ~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~-~~~~fD 177 (257)
.+.++||++|+ |.|..+.++++..+. +|++++.+++-.+.+.+.+... .-+.....|..+.+.+ ..+.+|
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~~d 220 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFLVEELGFD------GAIDYKNEDLAAGLKRECPKGID 220 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCCS------EEEETTTSCHHHHHHHHCTTCEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCC------EEEECCCHHHHHHHHHhcCCCce
Confidence 45689999997 456677777777664 9999999999888883333211 0011111344444433 345799
Q ss_pred EEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 178 vIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
+|+.... .+.++. +.+.|+++|.++.-
T Consensus 221 ~vi~~~g-------------~~~~~~-~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 221 VFFDNVG-------------GEILDT-VLTRIAFKARIVLC 247 (336)
T ss_dssp EEEESSC-------------HHHHHH-HHTTEEEEEEEEEC
T ss_pred EEEECCC-------------cchHHH-HHHHHhhCCEEEEE
Confidence 9886432 124566 57899999998863
No 343
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=94.90 E-value=0.15 Score=44.71 Aligned_cols=99 Identities=15% Similarity=0.099 Sum_probs=62.6
Q ss_pred CCCCeEEEEeccchH-HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc--CCCcee
Q 025141 101 PNPKTIFIMGGGEGS-TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES--RKESYD 177 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~-~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~--~~~~fD 177 (257)
.+.++||+.|+|+.+ ++.++++..+...+++++.+++-.+.++++=. +.-+.....|..+.++. ....+|
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa-------~~~i~~~~~~~~~~~~~~~~~~g~d 231 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGA-------MQTFNSSEMSAPQMQSVLRELRFNQ 231 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC-------SEEEETTTSCHHHHHHHHGGGCSSE
T ss_pred CCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCC-------eEEEeCCCCCHHHHHHhhcccCCcc
Confidence 456899999986544 56677777776788999999999999987521 11111112344444433 235578
Q ss_pred EEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 178 vIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+|+-... . .+.++. +.+.|+++|.+++-.
T Consensus 232 ~v~d~~G-----~-------~~~~~~-~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 232 LILETAG-----V-------PQTVEL-AVEIAGPHAQLALVG 260 (346)
T ss_dssp EEEECSC-----S-------HHHHHH-HHHHCCTTCEEEECC
T ss_pred ccccccc-----c-------cchhhh-hhheecCCeEEEEEe
Confidence 7764432 1 234555 567899999988654
No 344
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=94.88 E-value=0.16 Score=45.39 Aligned_cols=96 Identities=21% Similarity=0.355 Sum_probs=57.1
Q ss_pred CCCeEEEEeccchH-HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEc---chHHHHhcCCCcee
Q 025141 102 NPKTIFIMGGGEGS-TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVIN---DARAELESRKESYD 177 (257)
Q Consensus 102 ~~~~VL~IG~G~G~-~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~---Da~~~l~~~~~~fD 177 (257)
++++||++|+|.=+ .+..+++..+. +|+++|.+++-.+.+++.+.. ++..+.. |..+.+ ..+|
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~--------~~~~~~~~~~~~~~~~----~~~D 232 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGS--------RVELLYSNSAEIETAV----AEAD 232 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGG--------GSEEEECCHHHHHHHH----HTCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCc--------eeEeeeCCHHHHHHHH----cCCC
Confidence 45899999985333 33444444554 899999999988887765431 1222222 222333 2689
Q ss_pred EEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEE
Q 025141 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (257)
Q Consensus 178 vIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~ 217 (257)
+||.....+.. +...+.+.+ ..+.|+|+|+++-
T Consensus 233 vVI~~~~~~~~--~~~~li~~~-----~~~~~~~g~~ivd 265 (361)
T 1pjc_A 233 LLIGAVLVPGR--RAPILVPAS-----LVEQMRTGSVIVD 265 (361)
T ss_dssp EEEECCCCTTS--SCCCCBCHH-----HHTTSCTTCEEEE
T ss_pred EEEECCCcCCC--CCCeecCHH-----HHhhCCCCCEEEE
Confidence 99876654331 112344443 2456889998774
No 345
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.87 E-value=0.031 Score=49.42 Aligned_cols=97 Identities=15% Similarity=0.157 Sum_probs=61.3
Q ss_pred CCCeEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-C-CCceeE
Q 025141 102 NPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-R-KESYDV 178 (257)
Q Consensus 102 ~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~-~-~~~fDv 178 (257)
+.++||++|+|+ |..+.++++..+..+|++++.+++-.+.+++. ... .-+.....|..+.+++ + ...+|+
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~-Ga~------~~~~~~~~~~~~~v~~~~~g~g~D~ 239 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV-GAD------YVINPFEEDVVKEVMDITDGNGVDV 239 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHH-TCS------EEECTTTSCHHHHHHHHTTTSCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-CCC------EEECCCCcCHHHHHHHHcCCCCCCE
Confidence 568999999854 56677777766644899999999988888864 211 0000001344444443 2 246999
Q ss_pred EEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
|+.... . .+.++. +.+.|+++|.++.-
T Consensus 240 vid~~g-----~-------~~~~~~-~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 240 FLEFSG-----A-------PKALEQ-GLQAVTPAGRVSLL 266 (348)
T ss_dssp EEECSC-----C-------HHHHHH-HHHHEEEEEEEEEC
T ss_pred EEECCC-----C-------HHHHHH-HHHHHhcCCEEEEE
Confidence 985532 1 234555 56788999988764
No 346
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=94.84 E-value=0.084 Score=47.05 Aligned_cols=96 Identities=24% Similarity=0.298 Sum_probs=61.3
Q ss_pred CCCeEEEEe--ccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcC-CCceeE
Q 025141 102 NPKTIFIMG--GGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR-KESYDV 178 (257)
Q Consensus 102 ~~~~VL~IG--~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~-~~~fDv 178 (257)
+.++||++| +|.|.++.++++.....+|++++.+++-.+.+++. +... .+ +. ..|..+.+++. .+.+|+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~l-Gad~-vi-~~-----~~~~~~~v~~~~~~g~Dv 242 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSL-GAHH-VI-DH-----SKPLAAEVAALGLGAPAF 242 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHT-TCSE-EE-CT-----TSCHHHHHHTTCSCCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHc-CCCE-EE-eC-----CCCHHHHHHHhcCCCceE
Confidence 456899998 34567788888852236999999999988888873 2110 00 01 12344444443 357998
Q ss_pred EEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
|+-... ..+.++. +.+.|+++|.++.-
T Consensus 243 vid~~g------------~~~~~~~-~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 243 VFSTTH------------TDKHAAE-IADLIAPQGRFCLI 269 (363)
T ss_dssp EEECSC------------HHHHHHH-HHHHSCTTCEEEEC
T ss_pred EEECCC------------chhhHHH-HHHHhcCCCEEEEE
Confidence 875322 1234566 57789999998864
No 347
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=94.78 E-value=0.39 Score=41.99 Aligned_cols=92 Identities=16% Similarity=0.127 Sum_probs=58.5
Q ss_pred CCCeEEEEeccc--hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHH-HHhcCCCceeE
Q 025141 102 NPKTIFIMGGGE--GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA-ELESRKESYDV 178 (257)
Q Consensus 102 ~~~~VL~IG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~-~l~~~~~~fDv 178 (257)
..++|.+||+|. +.+++.+.+.....+|+++|.+++.++.+++. .. +.-...|..+ .+ ...|+
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~-G~---------~~~~~~~~~~~~~----~~aDv 97 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL-GI---------IDEGTTSIAKVED----FSPDF 97 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT-TS---------CSEEESCTTGGGG----GCCSE
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHC-CC---------cchhcCCHHHHhh----ccCCE
Confidence 347899999984 34555665542223899999999988877653 11 0112234333 23 35799
Q ss_pred EEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEE
Q 025141 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (257)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~ 217 (257)
||+..+.. ...+.++. +...|+|+.+++-
T Consensus 98 Vilavp~~---------~~~~vl~~-l~~~l~~~~iv~d 126 (314)
T 3ggo_A 98 VMLSSPVR---------TFREIAKK-LSYILSEDATVTD 126 (314)
T ss_dssp EEECSCGG---------GHHHHHHH-HHHHSCTTCEEEE
T ss_pred EEEeCCHH---------HHHHHHHH-HhhccCCCcEEEE
Confidence 99876521 14567788 6888999887654
No 348
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.77 E-value=0.075 Score=48.03 Aligned_cols=103 Identities=17% Similarity=0.194 Sum_probs=61.1
Q ss_pred CCCeEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-CC-CceeE
Q 025141 102 NPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RK-ESYDV 178 (257)
Q Consensus 102 ~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~-~~-~~fDv 178 (257)
+.++||++|+|+ |.++.++++..+..+|++++.+++-.+.+++.-. . .-+.....|..+.+++ +. ..+|+
T Consensus 213 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa-~------~vi~~~~~~~~~~i~~~t~g~g~D~ 285 (404)
T 3ip1_A 213 PGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGA-D------HVIDPTKENFVEAVLDYTNGLGAKL 285 (404)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTC-S------EEECTTTSCHHHHHHHHTTTCCCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC-C------EEEcCCCCCHHHHHHHHhCCCCCCE
Confidence 467999999864 5567777877776699999999999999987521 0 0000011344444443 23 46999
Q ss_pred EEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
|+-.... +. .......+. +.+.++++|.++.-.
T Consensus 286 vid~~g~-----~~--~~~~~~~~~-l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 286 FLEATGV-----PQ--LVWPQIEEV-IWRARGINATVAIVA 318 (404)
T ss_dssp EEECSSC-----HH--HHHHHHHHH-HHHCSCCCCEEEECS
T ss_pred EEECCCC-----cH--HHHHHHHHH-HHhccCCCcEEEEeC
Confidence 9854321 10 011122222 234459999988643
No 349
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=94.77 E-value=0.11 Score=45.95 Aligned_cols=94 Identities=17% Similarity=0.137 Sum_probs=57.8
Q ss_pred CCCeEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 102 NPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 102 ~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
+.++||++|+|+ |..+.++++..+ .+|++++.+++-.+.+++.+... .+ +-..| .+.+++..+.+|+|+
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~G-a~Vi~~~~~~~~~~~~~~~lGa~-------~v-i~~~~-~~~~~~~~~g~D~vi 249 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMG-HHVTVISSSNKKREEALQDLGAD-------DY-VIGSD-QAKMSELADSLDYVI 249 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHT-CEEEEEESSTTHHHHHHTTSCCS-------CE-EETTC-HHHHHHSTTTEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHcCCc-------ee-ecccc-HHHHHHhcCCCCEEE
Confidence 568999999753 445666777655 48999999998888877444311 11 11122 233443335799998
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
-....+. . ++. ..+.|+++|.++.-
T Consensus 250 d~~g~~~-------~-----~~~-~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 250 DTVPVHH-------A-----LEP-YLSLLKLDGKLILM 274 (357)
T ss_dssp ECCCSCC-------C-----SHH-HHTTEEEEEEEEEC
T ss_pred ECCCChH-------H-----HHH-HHHHhccCCEEEEe
Confidence 5443211 1 234 46789999998864
No 350
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=94.71 E-value=0.04 Score=49.43 Aligned_cols=96 Identities=18% Similarity=0.184 Sum_probs=60.5
Q ss_pred CCCCeEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEE------cchHHHHhc-C
Q 025141 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVI------NDARAELES-R 172 (257)
Q Consensus 101 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~------~Da~~~l~~-~ 172 (257)
.+.++||++|+|+ |..+.++++..+..+|++++.+++-.+.+++. .. + .++. .|..+.+++ .
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l-Ga------~---~vi~~~~~~~~~~~~~v~~~~ 263 (380)
T 1vj0_A 194 FAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEI-GA------D---LTLNRRETSVEERRKAIMDIT 263 (380)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHT-TC------S---EEEETTTSCHHHHHHHHHHHT
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHc-CC------c---EEEeccccCcchHHHHHHHHh
Confidence 3458999999543 55677777776645999999999998988863 11 1 1121 233333433 2
Q ss_pred C-CceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 173 K-ESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 173 ~-~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
. ..+|+||-.... + +.++. +.+.|+++|.++.-.
T Consensus 264 ~g~g~Dvvid~~g~-----~-------~~~~~-~~~~l~~~G~iv~~G 298 (380)
T 1vj0_A 264 HGRGADFILEATGD-----S-------RALLE-GSELLRRGGFYSVAG 298 (380)
T ss_dssp TTSCEEEEEECSSC-----T-------THHHH-HHHHEEEEEEEEECC
T ss_pred CCCCCcEEEECCCC-----H-------HHHHH-HHHHHhcCCEEEEEe
Confidence 2 369999854321 1 12444 466889999888643
No 351
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=94.60 E-value=0.043 Score=48.37 Aligned_cols=97 Identities=18% Similarity=0.179 Sum_probs=60.2
Q ss_pred CCCCeEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025141 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (257)
Q Consensus 101 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvI 179 (257)
.+.++||++|+|+ |..+.++++..+ .+|++++.+++-.+.+++. ... .-+.....|..+.+++....+|+|
T Consensus 163 ~~g~~VlV~GaG~vG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~l-Ga~------~~~d~~~~~~~~~~~~~~~~~d~v 234 (339)
T 1rjw_A 163 KPGEWVAIYGIGGLGHVAVQYAKAMG-LNVVAVDIGDEKLELAKEL-GAD------LVVNPLKEDAAKFMKEKVGGVHAA 234 (339)
T ss_dssp CTTCEEEEECCSTTHHHHHHHHHHTT-CEEEEECSCHHHHHHHHHT-TCS------EEECTTTSCHHHHHHHHHSSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHC-CCC------EEecCCCccHHHHHHHHhCCCCEE
Confidence 4568999999853 666777777666 4999999999999988763 211 000000123333333211579999
Q ss_pred EEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
+.... . .+.++. +.+.|+++|.++.-
T Consensus 235 id~~g-----~-------~~~~~~-~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 235 VVTAV-----S-------KPAFQS-AYNSIRRGGACVLV 260 (339)
T ss_dssp EESSC-----C-------HHHHHH-HHHHEEEEEEEEEC
T ss_pred EECCC-----C-------HHHHHH-HHHHhhcCCEEEEe
Confidence 86532 1 123455 56788999988754
No 352
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=94.55 E-value=0.057 Score=47.20 Aligned_cols=74 Identities=11% Similarity=0.173 Sum_probs=55.6
Q ss_pred CCCCeEEEEeccchHHHHHHHhcCCCcE--EEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcC---CCc
Q 025141 101 PNPKTIFIMGGGEGSTAREILRHKTVEK--VVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR---KES 175 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~--v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~---~~~ 175 (257)
..+.+++++-+|.|++...+.+. +... |.++|+|+...+..+.+++ ...++.+|..++.... ...
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~a-G~~~~~v~a~E~d~~a~~ty~~N~~---------~~~~~~~DI~~i~~~~i~~~~~ 83 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDL-GIQVDRYIASEVCEDSITVGMVRHQ---------GKIMYVGDVRSVTQKHIQEWGP 83 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHT-TBCEEEEEEECCCHHHHHHHHHHTT---------TCEEEECCGGGCCHHHHHHTCC
T ss_pred CCCCEEEEeCcCccHHHHHHHHC-CCccceEEEEECCHHHHHHHHHhCC---------CCceeCCChHHccHHHhcccCC
Confidence 34568999999999999887774 4444 6899999999998887753 3357778887654321 146
Q ss_pred eeEEEEcCC
Q 025141 176 YDVIIGDLA 184 (257)
Q Consensus 176 fDvIi~D~~ 184 (257)
+|+|+..++
T Consensus 84 ~Dll~ggpP 92 (295)
T 2qrv_A 84 FDLVIGGSP 92 (295)
T ss_dssp CSEEEECCC
T ss_pred cCEEEecCC
Confidence 999999986
No 353
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=94.46 E-value=0.17 Score=45.10 Aligned_cols=94 Identities=19% Similarity=0.141 Sum_probs=56.7
Q ss_pred CCCeEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 102 NPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 102 ~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
+.++||++|+|+ |..+.++++..+ .+|++++.+++-.+.+++.+... ..+-..| .+.+++..+.+|+|+
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~G-a~Vi~~~~~~~~~~~~~~~lGa~--------~v~~~~~-~~~~~~~~~~~D~vi 256 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFG-SKVTVISTSPSKKEEALKNFGAD--------SFLVSRD-QEQMQAAAGTLDGII 256 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCGGGHHHHHHTSCCS--------EEEETTC-HHHHHHTTTCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHhcCCc--------eEEeccC-HHHHHHhhCCCCEEE
Confidence 568999999754 445667777666 48999999998887777443311 1111112 233443335799998
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
-....+. . ++. +.+.|+++|.++.-
T Consensus 257 d~~g~~~-------~-----~~~-~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 257 DTVSAVH-------P-----LLP-LFGLLKSHGKLILV 281 (366)
T ss_dssp ECCSSCC-------C-----SHH-HHHHEEEEEEEEEC
T ss_pred ECCCcHH-------H-----HHH-HHHHHhcCCEEEEE
Confidence 6543211 1 123 34567899988753
No 354
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.27 E-value=0.12 Score=47.12 Aligned_cols=106 Identities=20% Similarity=0.207 Sum_probs=58.2
Q ss_pred CCCeEEEEeccchH-HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCC-----CC-CCeEEEE---cch-----H
Q 025141 102 NPKTIFIMGGGEGS-TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAF-----SD-PRLELVI---NDA-----R 166 (257)
Q Consensus 102 ~~~~VL~IG~G~G~-~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~-----~~-~rv~i~~---~Da-----~ 166 (257)
.+.+|++||+|.=+ .+..+++..+ .+|+++|.++...+.+++. ....... .+ .....+. .+. .
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lG-a~V~v~D~~~~~l~~~~~~-G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~ 266 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLG-AVVSATDVRPAAKEQVASL-GAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQA 266 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSTTHHHHHHHT-TCEECCCCC-----------------CHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHc-CCceeecccccccccccccchhhhcchhhhhhhH
Confidence 46899999998544 3444455455 4899999999988888773 2110000 00 0000000 000 0
Q ss_pred HHHhcCCCceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEE
Q 025141 167 AELESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFV 216 (257)
Q Consensus 167 ~~l~~~~~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~ 216 (257)
.-+.+.-...|+||.-...|.. +...|.+++. -+.+|||.+++
T Consensus 267 ~~l~e~l~~aDVVI~tvlipg~--~ap~Lvt~em-----v~~Mk~GsVIV 309 (405)
T 4dio_A 267 ALVAEHIAKQDIVITTALIPGR--PAPRLVTREM-----LDSMKPGSVVV 309 (405)
T ss_dssp HHHHHHHHTCSEEEECCCCSSS--CCCCCBCHHH-----HTTSCTTCEEE
T ss_pred hHHHHHhcCCCEEEECCcCCCC--CCCEEecHHH-----HhcCCCCCEEE
Confidence 1111112468999987654432 2236777754 34578888776
No 355
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=94.26 E-value=0.41 Score=44.18 Aligned_cols=140 Identities=16% Similarity=0.197 Sum_probs=79.9
Q ss_pred CCCeEEEEeccchHH--HHHHHhcCCCcEEEEEECCHHHHHHHHhhhh-hccCCC--------CCCCeEEEEcchHHHHh
Q 025141 102 NPKTIFIMGGGEGST--AREILRHKTVEKVVMCDIDEEVVEFCKSYLV-VNKEAF--------SDPRLELVINDARAELE 170 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~--~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~-~~~~~~--------~~~rv~i~~~Da~~~l~ 170 (257)
..-++-+||+|.=++ +..+++. + -+|+++|+|++.++..++... .....+ ...++++ ..|..+-+
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~-G-~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~-ttd~~ea~- 82 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDF-G-HEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSF-TTDLAEGV- 82 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-T-CEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHHHH-
T ss_pred CceEEEEEcCCHHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEE-ECCHHHHH-
Confidence 456899999986443 4445553 3 489999999999888776311 000000 0123433 34554444
Q ss_pred cCCCceeEEEEcCCCCCC--CCcccCC-chHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCceEE
Q 025141 171 SRKESYDVIIGDLADPIE--GGPCYKL-YTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGCC 247 (257)
Q Consensus 171 ~~~~~fDvIi~D~~~~~~--~~p~~~L-~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~ 247 (257)
..-|+||+-.+.|.. .+. ..| +-++..+. +.+.|+++-+++..+..+ +...+++.+.+.+..+....
T Consensus 83 ---~~aDvvii~Vptp~~~~~~~-~Dl~~v~~v~~~-i~~~l~~g~iVV~~STv~-----pgtt~~l~~~l~e~~~~~d~ 152 (446)
T 4a7p_A 83 ---KDADAVFIAVGTPSRRGDGH-ADLSYVFAAARE-IAENLTKPSVIVTKSTVP-----VGTGDEVERIIAEVAPNSGA 152 (446)
T ss_dssp ---TTCSEEEECCCCCBCTTTCC-BCTHHHHHHHHH-HHHSCCSCCEEEECSCCC-----TTHHHHHHHHHHHHSTTSCC
T ss_pred ---hcCCEEEEEcCCCCccccCC-ccHHHHHHHHHH-HHHhcCCCCEEEEeCCCC-----chHHHHHHHHHHHhCCCCCc
Confidence 346999998765531 111 122 23566677 678899988777654322 23344555666666554444
Q ss_pred EeecCccc
Q 025141 248 ALFSSYSF 255 (257)
Q Consensus 248 ~~~~~~~~ 255 (257)
...++|.|
T Consensus 153 ~v~~~Pe~ 160 (446)
T 4a7p_A 153 KVVSNPEF 160 (446)
T ss_dssp EEEECCCC
T ss_pred eEEeCccc
Confidence 44555554
No 356
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=94.26 E-value=0.053 Score=47.84 Aligned_cols=93 Identities=12% Similarity=0.078 Sum_probs=59.0
Q ss_pred CCCeEEEEeccc-hHHHHHHHhcC--CCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcch-HHHHhc--CCCc
Q 025141 102 NPKTIFIMGGGE-GSTAREILRHK--TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDA-RAELES--RKES 175 (257)
Q Consensus 102 ~~~~VL~IG~G~-G~~~~~l~~~~--~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da-~~~l~~--~~~~ 175 (257)
+.++||++|+|+ |.++.++++.. + .+|++++.+++-.+.+++. .. + .++..+- .++++. ....
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~G-a~Vi~~~~~~~~~~~~~~l-Ga------~---~vi~~~~~~~~~~~~~~g~g 238 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKN-ITIVGISRSKKHRDFALEL-GA------D---YVSEMKDAESLINKLTDGLG 238 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTT-CEEEEECSCHHHHHHHHHH-TC------S---EEECHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCC-CEEEEEeCCHHHHHHHHHh-CC------C---EEeccccchHHHHHhhcCCC
Confidence 568999999864 55677777765 6 4799999999988888863 21 1 1121111 122222 1347
Q ss_pred eeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 176 YDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 176 fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
+|+|+-... . .+.++. +.+.|+++|.++.-
T Consensus 239 ~D~vid~~g-----~-------~~~~~~-~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 239 ASIAIDLVG-----T-------EETTYN-LGKLLAQEGAIILV 268 (344)
T ss_dssp EEEEEESSC-----C-------HHHHHH-HHHHEEEEEEEEEC
T ss_pred ccEEEECCC-----C-------hHHHHH-HHHHhhcCCEEEEe
Confidence 999985432 1 124555 56789999998764
No 357
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=94.15 E-value=0.029 Score=49.48 Aligned_cols=96 Identities=17% Similarity=0.220 Sum_probs=59.8
Q ss_pred CCCeEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-CCCceeEE
Q 025141 102 NPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYDVI 179 (257)
Q Consensus 102 ~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~-~~~~fDvI 179 (257)
+.++||++|+|+ |..+.++++..+..+|++++.+++-.+.+++. ... .. +.+ ..|..+.+++ +...+|+|
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~--v~-~~~----~~~~~~~~~~~~~~g~D~v 235 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADR--LV-NPL----EEDLLEVVRRVTGSGVEVL 235 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSE--EE-CTT----TSCHHHHHHHHHSSCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHh--cc-CcC----ccCHHHHHHHhcCCCCCEE
Confidence 568999999854 56677777766644899999999887777764 210 00 000 1233333332 24579999
Q ss_pred EEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
+-... . .+.++. +.+.|+++|.++.-
T Consensus 236 id~~g-----~-------~~~~~~-~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 236 LEFSG-----N-------EAAIHQ-GLMALIPGGEARIL 261 (343)
T ss_dssp EECSC-----C-------HHHHHH-HHHHEEEEEEEEEC
T ss_pred EECCC-----C-------HHHHHH-HHHHHhcCCEEEEE
Confidence 85432 1 133455 56788999988754
No 358
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=94.04 E-value=0.062 Score=46.72 Aligned_cols=87 Identities=14% Similarity=0.243 Sum_probs=55.8
Q ss_pred CCCCeEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025141 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (257)
Q Consensus 101 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvI 179 (257)
.+.++||++|+|+ |.++.++++..+. +|++++ +++-.+.+++. ... .++ .| .+-+ .+.+|+|
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~l-Ga~---------~v~-~d-~~~v---~~g~Dvv 203 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKR-GVR---------HLY-RE-PSQV---TQKYFAI 203 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHH-TEE---------EEE-SS-GGGC---CSCEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHc-CCC---------EEE-cC-HHHh---CCCccEE
Confidence 3568999999853 6677788887664 999999 88888888773 211 122 24 2222 5789998
Q ss_pred EEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
+-.... + . ... +.+.|+++|.++.-
T Consensus 204 ~d~~g~-----~-------~-~~~-~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 204 FDAVNS-----Q-------N-AAA-LVPSLKANGHIICI 228 (315)
T ss_dssp ECC--------------------T-TGGGEEEEEEEEEE
T ss_pred EECCCc-----h-------h-HHH-HHHHhcCCCEEEEE
Confidence 743221 1 0 123 46789999988865
No 359
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=94.04 E-value=0.16 Score=44.37 Aligned_cols=96 Identities=19% Similarity=0.274 Sum_probs=60.1
Q ss_pred CCCCeEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEE-cchHHHHhc-CCCce
Q 025141 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVI-NDARAELES-RKESY 176 (257)
Q Consensus 101 ~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~-~Da~~~l~~-~~~~f 176 (257)
.+.++||+.|+ |.|..+.++++..+ .+|++++.+++-.+.+++. .. +..+.... .|..+.+.. ..+.+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G-~~V~~~~~~~~~~~~~~~~-g~------~~~~d~~~~~~~~~~~~~~~~~~~ 215 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKG-CKVVGAAGSDEKIAYLKQI-GF------DAAFNYKTVNSLEEALKKASPDGY 215 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHT-TC------SEEEETTSCSCHHHHHHHHCTTCE
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHhc-CC------cEEEecCCHHHHHHHHHHHhCCCC
Confidence 34689999997 55666666666655 4899999999888888543 21 00011111 334444433 23579
Q ss_pred eEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 177 DvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
|+++..... +.++. +.+.|+++|.++.-
T Consensus 216 d~vi~~~g~-------------~~~~~-~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 216 DCYFDNVGG-------------EFLNT-VLSQMKDFGKIAIC 243 (333)
T ss_dssp EEEEESSCH-------------HHHHH-HHTTEEEEEEEEEC
T ss_pred eEEEECCCh-------------HHHHH-HHHHHhcCCEEEEE
Confidence 999865421 22456 57889999998764
No 360
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=93.81 E-value=0.14 Score=45.08 Aligned_cols=97 Identities=16% Similarity=0.085 Sum_probs=60.9
Q ss_pred CCCCeEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEE-EcchHHHHhc-CCCce
Q 025141 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELV-INDARAELES-RKESY 176 (257)
Q Consensus 101 ~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~-~~Da~~~l~~-~~~~f 176 (257)
.+.++||++|+ |.|..+.++++..+ .+|++++.+++-.+.+++. .. +.-+.+. ..|..+.++. ..+.+
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G-a~V~~~~~~~~~~~~~~~~-g~------~~~~d~~~~~~~~~~~~~~~~~~~ 239 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMG-YRVLGIDGGEGKEELFRSI-GG------EVFIDFTKEKDIVGAVLKATDGGA 239 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECSTTHHHHHHHT-TC------CEEEETTTCSCHHHHHHHHHTSCE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC-CcEEEEcCCHHHHHHHHHc-CC------ceEEecCccHhHHHHHHHHhCCCC
Confidence 34589999998 45666667777655 4899999998888887763 11 1001100 1233444432 12379
Q ss_pred eEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 177 DvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
|+|+..... .+.++. +.+.|+++|.++.-
T Consensus 240 D~vi~~~g~------------~~~~~~-~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 240 HGVINVSVS------------EAAIEA-STRYVRANGTTVLV 268 (347)
T ss_dssp EEEEECSSC------------HHHHHH-HTTSEEEEEEEEEC
T ss_pred CEEEECCCc------------HHHHHH-HHHHHhcCCEEEEE
Confidence 999865421 234566 68899999988754
No 361
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=93.81 E-value=0.16 Score=44.68 Aligned_cols=95 Identities=21% Similarity=0.368 Sum_probs=60.8
Q ss_pred CCCeEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-CCCceeE
Q 025141 102 NPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYDV 178 (257)
Q Consensus 102 ~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~-~~~~fDv 178 (257)
+.++||++|+ |.|..+.++++..+. +|++++.+++-.+.+++. .... .. +.+ .|..+.++. ..+.+|+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~l-Ga~~-vi-~~~-----~~~~~~~~~~~~~g~Dv 220 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKKM-GADI-VL-NHK-----ESLLNQFKTQGIELVDY 220 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHHHHH-TCSE-EE-CTT-----SCHHHHHHHHTCCCEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc-CCcE-EE-ECC-----ccHHHHHHHhCCCCccE
Confidence 5689999963 446677778887664 999999999998988873 2110 00 011 233333433 3457999
Q ss_pred EEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
|+-... ....++. +.+.|+++|.++.-
T Consensus 221 v~d~~g------------~~~~~~~-~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 221 VFCTFN------------TDMYYDD-MIQLVKPRGHIATI 247 (346)
T ss_dssp EEESSC------------HHHHHHH-HHHHEEEEEEEEES
T ss_pred EEECCC------------chHHHHH-HHHHhccCCEEEEE
Confidence 885422 1244566 56789999999754
No 362
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=93.80 E-value=0.93 Score=45.99 Aligned_cols=140 Identities=9% Similarity=0.063 Sum_probs=87.0
Q ss_pred CCeEEEEeccchHHHHHHHhcCCC-cEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc----------
Q 025141 103 PKTIFIMGGGEGSTAREILRHKTV-EKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES---------- 171 (257)
Q Consensus 103 ~~~VL~IG~G~G~~~~~l~~~~~~-~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~---------- 171 (257)
+-++++|-||.|++..-+.+. +. ..+.++|+|+...+.-+.+++ ...++.+|..++++.
T Consensus 540 ~l~~iDLFaG~GGlslGl~~A-G~~~vv~avEid~~A~~ty~~N~p---------~~~~~~~DI~~l~~~~~~~di~~~~ 609 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQA-GISDTLWAIEMWDPAAQAFRLNNP---------GSTVFTEDCNILLKLVMAGETTNSR 609 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHH-TSEEEEEEECSSHHHHHHHHHHCT---------TSEEECSCHHHHHHHHHHTCSBCTT
T ss_pred CCeEEEeccCccHHHHHHHHC-CCCceEEEEECCHHHHHHHHHhCC---------CCccccccHHHHhhhccchhhhhhh
Confidence 358999999999998877664 44 468899999999999888764 446778887665310
Q ss_pred -----CCCceeEEEEcCCC-CCC-CCc---------ccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHH
Q 025141 172 -----RKESYDVIIGDLAD-PIE-GGP---------CYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIY 235 (257)
Q Consensus 172 -----~~~~fDvIi~D~~~-~~~-~~p---------~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~ 235 (257)
.....|+|+.-++- +.+ .+. ...| -.+|++. .+.++|.-+++=|+.....+.....+..++
T Consensus 610 ~~~lp~~~~vDll~GGpPCQ~FS~ag~~~~~~~~d~R~~L-~~~~~ri--v~~~rPk~~llENV~glls~~~~~~~~~i~ 686 (1002)
T 3swr_A 610 GQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSL-VVSFLSY--CDYYRPRFFLLENVRNFVSFKRSMVLKLTL 686 (1002)
T ss_dssp CCBCCCTTTCSEEEECCCCTTCCSSSCCCHHHHHHHTTSH-HHHHHHH--HHHHCCSEEEEEEEGGGGTTGGGHHHHHHH
T ss_pred hhhcccCCCeeEEEEcCCCcchhhhCCCCCCcccchhhHH-HHHHHHH--HHHhCCCEEEEeccHHHhccCcchHHHHHH
Confidence 12468999988863 221 110 0111 2456664 356899887776652211122345677788
Q ss_pred HHHhhhCCceEEEeecCccc
Q 025141 236 NTLRQVFKCGCCALFSSYSF 255 (257)
Q Consensus 236 ~~l~~~F~~v~~~~~~~~~~ 255 (257)
+.|.+.-=.+.........|
T Consensus 687 ~~L~~lGY~v~~~vLnA~dy 706 (1002)
T 3swr_A 687 RCLVRMGYQCTFGVLQAGQY 706 (1002)
T ss_dssp HHHHHHTCEEEEEEEEGGGG
T ss_pred HHHHhcCCeEEEEEEEHHHC
Confidence 87876533344333333333
No 363
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=93.77 E-value=0.079 Score=46.30 Aligned_cols=97 Identities=14% Similarity=0.159 Sum_probs=61.7
Q ss_pred CCCCeEEEEe--ccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-C-CCce
Q 025141 101 PNPKTIFIMG--GGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-R-KESY 176 (257)
Q Consensus 101 ~~~~~VL~IG--~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~-~-~~~f 176 (257)
.+.++||++| +|.|..+.++++..+ .+|++++.+++-.+.+++.- . +.-+.....|..+.+.+ . ...+
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~G-a------~~~~~~~~~~~~~~~~~~~~~~g~ 210 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALG-AKLIGTVSSPEKAAHAKALG-A------WETIDYSHEDVAKRVLELTDGKKC 210 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHHHT-C------SEEEETTTSCHHHHHHHHTTTCCE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHcC-C------CEEEeCCCccHHHHHHHHhCCCCc
Confidence 3468999999 355667777777666 48999999999988888641 1 10111111344444433 2 3579
Q ss_pred eEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 177 DvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
|+|+..... +.++. +.+.|+++|.++.-.
T Consensus 211 Dvvid~~g~-------------~~~~~-~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 211 PVVYDGVGQ-------------DTWLT-SLDSVAPRGLVVSFG 239 (325)
T ss_dssp EEEEESSCG-------------GGHHH-HHTTEEEEEEEEECC
T ss_pred eEEEECCCh-------------HHHHH-HHHHhcCCCEEEEEe
Confidence 998864321 12445 578999999988653
No 364
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=93.69 E-value=0.4 Score=42.84 Aligned_cols=96 Identities=20% Similarity=0.380 Sum_probs=53.7
Q ss_pred CCCeEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcc---hHHHHhcCCCcee
Q 025141 102 NPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVIND---ARAELESRKESYD 177 (257)
Q Consensus 102 ~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~D---a~~~l~~~~~~fD 177 (257)
.+++|+++|+|. |..+...++..+ .+|+++|.+++-.+.+++.+. ..+.....+ ..+.+ ...|
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~G-a~V~~~d~~~~~~~~~~~~~g--------~~~~~~~~~~~~l~~~~----~~~D 231 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMG-AQVTILDVNHKRLQYLDDVFG--------GRVITLTATEANIKKSV----QHAD 231 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHTT--------TSEEEEECCHHHHHHHH----HHCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC-CEEEEEECCHHHHHHHHHhcC--------ceEEEecCCHHHHHHHH----hCCC
Confidence 468999999853 222333344445 489999999988777665332 122222222 22233 3689
Q ss_pred EEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEE
Q 025141 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (257)
Q Consensus 178 vIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~ 217 (257)
+|+.....+.. ....+.+.+. .+.|+++|+++.
T Consensus 232 vVi~~~g~~~~--~~~~li~~~~-----l~~mk~gg~iV~ 264 (369)
T 2eez_A 232 LLIGAVLVPGA--KAPKLVTRDM-----LSLMKEGAVIVD 264 (369)
T ss_dssp EEEECCC---------CCSCHHH-----HTTSCTTCEEEE
T ss_pred EEEECCCCCcc--ccchhHHHHH-----HHhhcCCCEEEE
Confidence 99887653320 1124445443 345788998763
No 365
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=93.64 E-value=0.094 Score=46.23 Aligned_cols=97 Identities=23% Similarity=0.316 Sum_probs=59.4
Q ss_pred CCCCeEEEEecc--chHHHHHHHhcC-CCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-CC-Cc
Q 025141 101 PNPKTIFIMGGG--EGSTAREILRHK-TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RK-ES 175 (257)
Q Consensus 101 ~~~~~VL~IG~G--~G~~~~~l~~~~-~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~-~~-~~ 175 (257)
.+.++||++|+| .|..+.++++.. + .+|++++.+++-.+.+++. .. +.-+.....|..+.+.. .. +.
T Consensus 169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~G-a~Vi~~~~~~~~~~~~~~~-g~------~~~~~~~~~~~~~~~~~~~~~~~ 240 (347)
T 1jvb_A 169 DPTKTLLVVGAGGGLGTMAVQIAKAVSG-ATIIGVDVREEAVEAAKRA-GA------DYVINASMQDPLAEIRRITESKG 240 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTC-CEEEEEESSHHHHHHHHHH-TC------SEEEETTTSCHHHHHHHHTTTSC
T ss_pred CCCCEEEEECCCccHHHHHHHHHHHcCC-CeEEEEcCCHHHHHHHHHh-CC------CEEecCCCccHHHHHHHHhcCCC
Confidence 356899999987 444556666654 5 4899999999988888763 21 00000001233222332 22 47
Q ss_pred eeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 176 YDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 176 fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
+|+|+..... .+.++. +.+.|+++|.++.-
T Consensus 241 ~d~vi~~~g~------------~~~~~~-~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 241 VDAVIDLNNS------------EKTLSV-YPKALAKQGKYVMV 270 (347)
T ss_dssp EEEEEESCCC------------HHHHTT-GGGGEEEEEEEEEC
T ss_pred ceEEEECCCC------------HHHHHH-HHHHHhcCCEEEEE
Confidence 9999865431 123455 57889999988864
No 366
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=93.63 E-value=0.26 Score=42.42 Aligned_cols=91 Identities=12% Similarity=0.103 Sum_probs=58.4
Q ss_pred CCCCeEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcch-HHHHhcCCCcee
Q 025141 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDA-RAELESRKESYD 177 (257)
Q Consensus 101 ~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da-~~~l~~~~~~fD 177 (257)
.+.++||++|+ |.|..+.++++..+ .+|++++.+++-.+.+++. .. + .++..+- .++.+.. +.+|
T Consensus 124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~-ga------~---~~~~~~~~~~~~~~~-~~~d 191 (302)
T 1iz0_A 124 RPGEKVLVQAAAGALGTAAVQVARAMG-LRVLAAASRPEKLALPLAL-GA------E---EAATYAEVPERAKAW-GGLD 191 (302)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTT-CEEEEEESSGGGSHHHHHT-TC------S---EEEEGGGHHHHHHHT-TSEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHhc-CC------C---EEEECCcchhHHHHh-cCce
Confidence 45689999997 45667777777666 4899999999888888763 11 1 1222111 2233222 5799
Q ss_pred EEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 178 vIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
+|+. ... + .++. +.+.|+++|.++.-
T Consensus 192 ~vid-~g~-----~--------~~~~-~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 192 LVLE-VRG-----K--------EVEE-SLGLLAHGGRLVYI 217 (302)
T ss_dssp EEEE-CSC-----T--------THHH-HHTTEEEEEEEEEC
T ss_pred EEEE-CCH-----H--------HHHH-HHHhhccCCEEEEE
Confidence 9986 432 1 1345 57789999988753
No 367
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=93.63 E-value=0.074 Score=46.60 Aligned_cols=96 Identities=15% Similarity=0.277 Sum_probs=61.2
Q ss_pred CCCCeEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-C-CCce
Q 025141 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-R-KESY 176 (257)
Q Consensus 101 ~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~-~-~~~f 176 (257)
.+.++||++|+ |.|..+.++++..+ .+|++++.+++-.+.+++.- . +.-+.....|..+.+++ . ...+
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~g-a------~~~~~~~~~~~~~~~~~~~~~~g~ 218 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKG-AHTIAVASTDEKLKIAKEYG-A------EYLINASKEDILRQVLKFTNGKGV 218 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTT-C------SEEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHcC-C------cEEEeCCCchHHHHHHHHhCCCCc
Confidence 34689999994 55667777777766 48999999999888888741 1 10011111344444443 2 3579
Q ss_pred eEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 177 DvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
|+|+..... +.++. +.+.|+++|.++.-
T Consensus 219 D~vid~~g~-------------~~~~~-~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 219 DASFDSVGK-------------DTFEI-SLAALKRKGVFVSF 246 (334)
T ss_dssp EEEEECCGG-------------GGHHH-HHHHEEEEEEEEEC
T ss_pred eEEEECCCh-------------HHHHH-HHHHhccCCEEEEE
Confidence 999865321 12345 46689999998864
No 368
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=93.62 E-value=0.14 Score=45.01 Aligned_cols=95 Identities=21% Similarity=0.309 Sum_probs=61.2
Q ss_pred CCCCeEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-CC-Cce
Q 025141 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RK-ESY 176 (257)
Q Consensus 101 ~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~-~~-~~f 176 (257)
...++||++|+ |.|..+.++++..+ .+|++++.+++-.+.+++. .. +.-+... .|..+.+++ .. ..+
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~-ga------~~v~~~~-~~~~~~v~~~~~~~g~ 228 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMG-AKVIAVVNRTAATEFVKSV-GA------DIVLPLE-EGWAKAVREATGGAGV 228 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSGGGHHHHHHH-TC------SEEEESS-TTHHHHHHHHTTTSCE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhc-CC------cEEecCc-hhHHHHHHHHhCCCCc
Confidence 34689999996 55677788888766 4999999999888888874 11 1111111 344444443 22 479
Q ss_pred eEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 177 DvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
|+|+-.... + .++. +.+.|+++|.++.-
T Consensus 229 Dvvid~~g~-----~--------~~~~-~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 229 DMVVDPIGG-----P--------AFDD-AVRTLASEGRLLVV 256 (342)
T ss_dssp EEEEESCC---------------CHHH-HHHTEEEEEEEEEC
T ss_pred eEEEECCch-----h--------HHHH-HHHhhcCCCEEEEE
Confidence 999865432 1 1344 46789999988853
No 369
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=93.58 E-value=0.078 Score=46.63 Aligned_cols=97 Identities=12% Similarity=0.122 Sum_probs=60.8
Q ss_pred CCCCeEEEEecc--chHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-C-CCce
Q 025141 101 PNPKTIFIMGGG--EGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-R-KESY 176 (257)
Q Consensus 101 ~~~~~VL~IG~G--~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~-~-~~~f 176 (257)
.+.++||++|+| .|..+.++++..+ .+|++++.+++-.+.+++. .. +.-+.....|..+.+.+ . ...+
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~l-ga------~~~~~~~~~~~~~~~~~~~~~~g~ 214 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILN-FRLIAVTRNNKHTEELLRL-GA------AYVIDTSTAPLYETVMELTNGIGA 214 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHT-CEEEEEESSSTTHHHHHHH-TC------SEEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhC-CC------cEEEeCCcccHHHHHHHHhCCCCC
Confidence 456899999986 5667777777666 4899999999988888873 21 10111111344444433 2 3479
Q ss_pred eEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 177 DvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
|+|+-.... + ..... .+.|+++|.++.-.
T Consensus 215 Dvvid~~g~-----~-------~~~~~--~~~l~~~G~iv~~G 243 (340)
T 3gms_A 215 DAAIDSIGG-----P-------DGNEL--AFSLRPNGHFLTIG 243 (340)
T ss_dssp EEEEESSCH-----H-------HHHHH--HHTEEEEEEEEECC
T ss_pred cEEEECCCC-----h-------hHHHH--HHHhcCCCEEEEEe
Confidence 999864321 1 22233 36899999998643
No 370
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=93.52 E-value=0.09 Score=46.77 Aligned_cols=93 Identities=18% Similarity=0.229 Sum_probs=56.8
Q ss_pred CCeEEEEeccc-hHHHHHHHhcCCCcEEEEEECCH---HHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeE
Q 025141 103 PKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDE---EVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDV 178 (257)
Q Consensus 103 ~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~---~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDv 178 (257)
.++||++|+|+ |..+.++++..+. +|++++.++ +-.+.+++. ... .+. . .|..+.+.+....+|+
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~~-ga~-------~v~-~-~~~~~~~~~~~~~~d~ 249 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIEET-KTN-------YYN-S-SNGYDKLKDSVGKFDV 249 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHHH-TCE-------EEE-C-TTCSHHHHHHHCCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHHHh-CCc-------eec-h-HHHHHHHHHhCCCCCE
Confidence 68999999843 4455666665554 999999988 777777753 211 111 0 1222233222257999
Q ss_pred EEEcCCCCCCCCcccCCchHHHH-HHHHcCcCCCCcEEEEec
Q 025141 179 IIGDLADPIEGGPCYKLYTKSFY-EFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~-~~~~~~~L~pgGil~~~~ 219 (257)
|+..... + ..+ +. +.+.|+++|.++.-.
T Consensus 250 vid~~g~-----~-------~~~~~~-~~~~l~~~G~iv~~g 278 (366)
T 2cdc_A 250 IIDATGA-----D-------VNILGN-VIPLLGRNGVLGLFG 278 (366)
T ss_dssp EEECCCC-----C-------THHHHH-HGGGEEEEEEEEECS
T ss_pred EEECCCC-----h-------HHHHHH-HHHHHhcCCEEEEEe
Confidence 9865432 1 124 55 578899999887543
No 371
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=93.51 E-value=0.41 Score=41.89 Aligned_cols=96 Identities=15% Similarity=0.183 Sum_probs=60.7
Q ss_pred CCCeEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEE-cchHHHHhc-CCCcee
Q 025141 102 NPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVI-NDARAELES-RKESYD 177 (257)
Q Consensus 102 ~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~-~Da~~~l~~-~~~~fD 177 (257)
+.++||++|+ |.|..+.++++..+ .+|++++.+++-.+.+++.+... .-+.... .|..+.++. ....+|
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G-~~V~~~~~~~~~~~~~~~~~g~~------~~~d~~~~~~~~~~~~~~~~~~~d 227 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMG-CYVVGSAGSKEKVDLLKTKFGFD------DAFNYKEESDLTAALKRCFPNGID 227 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTSCCS------EEEETTSCSCSHHHHHHHCTTCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHcCCc------eEEecCCHHHHHHHHHHHhCCCCc
Confidence 4689999996 56667777777666 48999999999888887433211 0000000 133344433 235799
Q ss_pred EEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 178 vIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
+|+.... .+.++. +.+.|+++|.++.-
T Consensus 228 ~vi~~~g-------------~~~~~~-~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 228 IYFENVG-------------GKMLDA-VLVNMNMHGRIAVC 254 (345)
T ss_dssp EEEESSC-------------HHHHHH-HHTTEEEEEEEEEC
T ss_pred EEEECCC-------------HHHHHH-HHHHHhcCCEEEEE
Confidence 9986532 123566 57899999998864
No 372
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=93.45 E-value=0.23 Score=45.30 Aligned_cols=94 Identities=24% Similarity=0.317 Sum_probs=60.2
Q ss_pred CCeEEEEeccchH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHH--HHhcC-CCcee
Q 025141 103 PKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA--ELESR-KESYD 177 (257)
Q Consensus 103 ~~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~--~l~~~-~~~fD 177 (257)
..+|+++|+|-=+ +++.|.+ .+ ..|+++|.|++.++.+++. .+.++.+|+.+ .|+.. -++.|
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~-~g-~~vvvId~d~~~v~~~~~~-----------g~~vi~GDat~~~~L~~agi~~A~ 70 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLS-SG-VKMVVLDHDPDHIETLRKF-----------GMKVFYGDATRMDLLESAGAAKAE 70 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH-TT-CCEEEEECCHHHHHHHHHT-----------TCCCEESCTTCHHHHHHTTTTTCS
T ss_pred CCeEEEECCCHHHHHHHHHHHH-CC-CCEEEEECCHHHHHHHHhC-----------CCeEEEcCCCCHHHHHhcCCCccC
Confidence 4579999997633 2344444 34 4899999999999988752 34577888754 45444 37899
Q ss_pred EEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 178 vIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+|++...++. .+..... ..+.+.|+..+++..
T Consensus 71 ~viv~~~~~~--------~n~~i~~--~ar~~~p~~~Iiara 102 (413)
T 3l9w_A 71 VLINAIDDPQ--------TNLQLTE--MVKEHFPHLQIIARA 102 (413)
T ss_dssp EEEECCSSHH--------HHHHHHH--HHHHHCTTCEEEEEE
T ss_pred EEEECCCChH--------HHHHHHH--HHHHhCCCCeEEEEE
Confidence 9998765321 1122222 345677887666654
No 373
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=93.36 E-value=0.16 Score=46.23 Aligned_cols=48 Identities=17% Similarity=0.209 Sum_probs=40.1
Q ss_pred CCCCeEEEEeccchHHHHHHH-hcCC-CcEEEEEECCHHHHHHHHhhhhh
Q 025141 101 PNPKTIFIMGGGEGSTAREIL-RHKT-VEKVVMCDIDEEVVEFCKSYLVV 148 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~-~~~~-~~~v~~VEid~~vi~~a~~~~~~ 148 (257)
.+...|+|||++.|..+..++ +..+ ..+|.++|.+|...+..++++..
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 355789999999999998877 4333 37999999999999999998765
No 374
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=93.36 E-value=0.51 Score=35.50 Aligned_cols=69 Identities=19% Similarity=0.231 Sum_probs=45.1
Q ss_pred CCeEEEEeccchH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHH--HHhcC-CCcee
Q 025141 103 PKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA--ELESR-KESYD 177 (257)
Q Consensus 103 ~~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~--~l~~~-~~~fD 177 (257)
.++|+++|+|.=+ +++.+.+. + .+|+++|.|++.++.+++. .+.++.+|+.+ .++.. -+..|
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~-g-~~V~~id~~~~~~~~~~~~-----------~~~~~~gd~~~~~~l~~~~~~~~d 72 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAA-G-KKVLAVDKSKEKIELLEDE-----------GFDAVIADPTDESFYRSLDLEGVS 72 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-T-CCEEEEESCHHHHHHHHHT-----------TCEEEECCTTCHHHHHHSCCTTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-C-CeEEEEECCHHHHHHHHHC-----------CCcEEECCCCCHHHHHhCCcccCC
Confidence 3589999996522 33444443 3 4899999999988776642 24566777643 34433 35799
Q ss_pred EEEEcCC
Q 025141 178 VIIGDLA 184 (257)
Q Consensus 178 vIi~D~~ 184 (257)
+|+....
T Consensus 73 ~vi~~~~ 79 (141)
T 3llv_A 73 AVLITGS 79 (141)
T ss_dssp EEEECCS
T ss_pred EEEEecC
Confidence 9988655
No 375
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=93.32 E-value=0.079 Score=46.67 Aligned_cols=64 Identities=16% Similarity=0.091 Sum_probs=51.0
Q ss_pred CCCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHh
Q 025141 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELE 170 (257)
Q Consensus 100 ~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~ 170 (257)
..+..-|||-.||+|+++.++.+.. .+.+++|+++...+++++.+.... .....+.+|+++...
T Consensus 250 ~~~~~~VlDpF~GsGtt~~aa~~~g--r~~ig~e~~~~~~~~~~~r~~~~~-----~~~~~~~~~~~~i~~ 313 (323)
T 1boo_A 250 TEPDDLVVDIFGGSNTTGLVAERES--RKWISFEMKPEYVAASAFRFLDNN-----ISEEKITDIYNRILN 313 (323)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHGGGSCSC-----SCHHHHHHHHHHHHT
T ss_pred CCCCCEEEECCCCCCHHHHHHHHcC--CCEEEEeCCHHHHHHHHHHHHhcc-----cchHHHHHHHHHHHc
Confidence 3556789999999999999998863 689999999999999999876432 235666777777654
No 376
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.29 E-value=0.25 Score=44.70 Aligned_cols=106 Identities=20% Similarity=0.255 Sum_probs=57.3
Q ss_pred CCCeEEEEeccchH-HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCC-C-CCeEEEE----c----chHHHHh
Q 025141 102 NPKTIFIMGGGEGS-TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFS-D-PRLELVI----N----DARAELE 170 (257)
Q Consensus 102 ~~~~VL~IG~G~G~-~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~-~-~rv~i~~----~----Da~~~l~ 170 (257)
++++|++||+|.=+ .+..+++..+ .+|+++|.++...+.+++. ......+. + ....-+. . .-..-+.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lG-a~V~v~D~~~~~l~~~~~l-Ga~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~ 260 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLG-AKTTGYDVRPEVAEQVRSV-GAQWLDLGIDAAGEGGYARELSEAERAQQQQALE 260 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHT-CEEEEECSSGGGHHHHHHT-TCEECCCC-------------CHHHHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc-CCeEEeccccccccccchhhhhHHHHhhhHHHHH
Confidence 56899999998544 3334444345 4899999999988888763 11000000 0 0000000 0 0011122
Q ss_pred cCCCceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEE
Q 025141 171 SRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFV 216 (257)
Q Consensus 171 ~~~~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~ 216 (257)
+.-...|+||.-...|.. +...|.+.+.++ .+|||.+++
T Consensus 261 e~l~~aDIVI~tv~iPg~--~ap~Lvt~emv~-----~MkpGsVIV 299 (381)
T 3p2y_A 261 DAITKFDIVITTALVPGR--PAPRLVTAAAAT-----GMQPGSVVV 299 (381)
T ss_dssp HHHTTCSEEEECCCCTTS--CCCCCBCHHHHH-----TSCTTCEEE
T ss_pred HHHhcCCEEEECCCCCCc--ccceeecHHHHh-----cCCCCcEEE
Confidence 223679999987644431 223677876555 467887776
No 377
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=93.22 E-value=0.15 Score=45.28 Aligned_cols=97 Identities=18% Similarity=0.307 Sum_probs=61.9
Q ss_pred CCCCeEEEEe--ccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-CCCcee
Q 025141 101 PNPKTIFIMG--GGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYD 177 (257)
Q Consensus 101 ~~~~~VL~IG--~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~-~~~~fD 177 (257)
...++||++| +|.|..+.++++..+ .+|++++.+++-.+.+++. ... .-+.....|..+.++. ....+|
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~G-a~Vi~~~~~~~~~~~~~~~-Ga~------~~~~~~~~~~~~~~~~~~~~g~D 233 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKAK-CHVIGTCSSDEKSAFLKSL-GCD------RPINYKTEPVGTVLKQEYPEGVD 233 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHT-TCS------EEEETTTSCHHHHHHHHCTTCEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCC-CEEEEEECCHHHHHHHHHc-CCc------EEEecCChhHHHHHHHhcCCCCC
Confidence 4568999999 566777888888766 4899999999888888863 211 0000001233344433 335799
Q ss_pred EEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 178 vIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+|+.... . +.++. +.+.|+++|.++.-.
T Consensus 234 ~vid~~g-----~--------~~~~~-~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 234 VVYESVG-----G--------AMFDL-AVDALATKGRLIVIG 261 (362)
T ss_dssp EEEECSC-----T--------HHHHH-HHHHEEEEEEEEECC
T ss_pred EEEECCC-----H--------HHHHH-HHHHHhcCCEEEEEe
Confidence 9985432 1 23455 567899999888643
No 378
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.12 E-value=0.27 Score=37.91 Aligned_cols=98 Identities=20% Similarity=0.132 Sum_probs=54.0
Q ss_pred CCCCeEEEEeccchH-H-HHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchH--HHHhcC-CCc
Q 025141 101 PNPKTIFIMGGGEGS-T-AREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDAR--AELESR-KES 175 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~-~-~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~--~~l~~~-~~~ 175 (257)
...++|+++|+|.=+ . +..+.+ .+ .+|+++|.+++.++.+++ .....++.+|.. +.+... -..
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~-~g-~~V~vid~~~~~~~~~~~----------~~g~~~~~~d~~~~~~l~~~~~~~ 84 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASS-SG-HSVVVVDKNEYAFHRLNS----------EFSGFTVVGDAAEFETLKECGMEK 84 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-TT-CEEEEEESCGGGGGGSCT----------TCCSEEEESCTTSHHHHHTTTGGG
T ss_pred cCCCcEEEECCCHHHHHHHHHHHh-CC-CeEEEEECCHHHHHHHHh----------cCCCcEEEecCCCHHHHHHcCccc
Confidence 356799999986533 2 233333 34 489999999876543321 122345555542 234332 357
Q ss_pred eeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecC
Q 025141 176 YDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (257)
Q Consensus 176 fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~ 220 (257)
+|+|+....++. ....... +.+.+.+...++....
T Consensus 85 ad~Vi~~~~~~~---------~~~~~~~-~~~~~~~~~~iv~~~~ 119 (155)
T 2g1u_A 85 ADMVFAFTNDDS---------TNFFISM-NARYMFNVENVIARVY 119 (155)
T ss_dssp CSEEEECSSCHH---------HHHHHHH-HHHHTSCCSEEEEECS
T ss_pred CCEEEEEeCCcH---------HHHHHHH-HHHHHCCCCeEEEEEC
Confidence 999998754311 1122222 2345566667766553
No 379
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=93.08 E-value=0.19 Score=43.98 Aligned_cols=96 Identities=16% Similarity=0.175 Sum_probs=59.4
Q ss_pred CCCeEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc--CCCcee
Q 025141 102 NPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES--RKESYD 177 (257)
Q Consensus 102 ~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~--~~~~fD 177 (257)
+.++||+.|+ |.|..+.++++..+ .+|++++.+++-.+.+++. .. +.-+.....|..+.+.+ ....+|
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G-~~Vi~~~~~~~~~~~~~~~-g~------~~~~d~~~~~~~~~i~~~~~~~~~d 216 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLG-ATVIGTVSTEEKAETARKL-GC------HHTINYSTQDFAEVVREITGGKGVD 216 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHH-TC------SEEEETTTSCHHHHHHHHHTTCCEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc-CC------CEEEECCCHHHHHHHHHHhCCCCCe
Confidence 4688999994 66777777777666 4899999999888888763 21 10011111233333332 234699
Q ss_pred EEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 178 vIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+|+..... +.++. +.+.|+++|.++.-.
T Consensus 217 ~vi~~~g~-------------~~~~~-~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 217 VVYDSIGK-------------DTLQK-SLDCLRPRGMCAAYG 244 (333)
T ss_dssp EEEECSCT-------------TTHHH-HHHTEEEEEEEEECC
T ss_pred EEEECCcH-------------HHHHH-HHHhhccCCEEEEEe
Confidence 99865431 11345 467899999887643
No 380
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=92.91 E-value=0.93 Score=42.05 Aligned_cols=111 Identities=16% Similarity=0.199 Sum_probs=64.6
Q ss_pred CCCCeEEEEeccchH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhhh-hhccCCC--------CCCCeEEEEcchHHHH
Q 025141 101 PNPKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYL-VVNKEAF--------SDPRLELVINDARAEL 169 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~-~~~~~~~--------~~~rv~i~~~Da~~~l 169 (257)
....+|.+||+|.=+ ++..+++. + -+|+++|+|++.++..++.- +...... ...++++ ..|..+.+
T Consensus 6 ~~~~~I~VIG~G~vG~~lA~~la~~-G-~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~-ttd~~~a~ 82 (478)
T 2y0c_A 6 HGSMNLTIIGSGSVGLVTGACLADI-G-HDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRF-STDIEAAV 82 (478)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHT-T-CEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ECCHHHHH
T ss_pred CCCceEEEECcCHHHHHHHHHHHhC-C-CEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEE-ECCHHHHh
Confidence 345799999999533 44555553 3 48999999999998887642 1100000 0123332 23443333
Q ss_pred hcCCCceeEEEEcCCCCCCC-CcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 170 ESRKESYDVIIGDLADPIEG-GPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 170 ~~~~~~fDvIi~D~~~~~~~-~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+..|+||+..+.|... +.+.--+..+.++. +.+.|+++-+++...
T Consensus 83 ----~~aDvviiaVptp~~~~~~~dl~~v~~v~~~-i~~~l~~~~iVV~~S 128 (478)
T 2y0c_A 83 ----AHGDVQFIAVGTPPDEDGSADLQYVLAAARN-IGRYMTGFKVIVDKS 128 (478)
T ss_dssp ----HHCSEEEECCCCCBCTTSSBCCHHHHHHHHH-HHHHCCSCEEEEECS
T ss_pred ----hcCCEEEEEeCCCcccCCCccHHHHHHHHHH-HHHhcCCCCEEEEeC
Confidence 3479999988754311 11111234567777 678899987776543
No 381
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=92.90 E-value=0.96 Score=41.64 Aligned_cols=108 Identities=16% Similarity=0.162 Sum_probs=62.2
Q ss_pred CeEEEEeccchH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhh-hccCCCC--------CCCeEEEEcchHHHHhcC
Q 025141 104 KTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLV-VNKEAFS--------DPRLELVINDARAELESR 172 (257)
Q Consensus 104 ~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~-~~~~~~~--------~~rv~i~~~Da~~~l~~~ 172 (257)
.+|.+||+|.=+ ++..+++. + -+|+++|++++.++..++... .....+. ..++++ ..|..+.+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~-G-~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~-t~d~~ea~--- 76 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL-G-ANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRF-GTEIEQAV--- 76 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-CEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEE-ESCHHHHG---
T ss_pred CEEEEECcCHHHHHHHHHHHhc-C-CEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEE-ECCHHHHH---
Confidence 479999998544 34445543 3 489999999999888776321 0000000 123443 34544444
Q ss_pred CCceeEEEEcCCCCCCCCcccCC-chHHHHHHHHcCcCCCCcEEEEec
Q 025141 173 KESYDVIIGDLADPIEGGPCYKL-YTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 173 ~~~fDvIi~D~~~~~~~~p~~~L-~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
...|+||+..+.+....-...+ +-.+.++. +.+.|+++-+++..+
T Consensus 77 -~~aDvViiaVptp~~~~~~~dl~~v~~v~~~-i~~~l~~g~iVV~~S 122 (450)
T 3gg2_A 77 -PEADIIFIAVGTPAGEDGSADMSYVLDAARS-IGRAMSRYILIVTKS 122 (450)
T ss_dssp -GGCSEEEECCCCCBCTTSSBCCHHHHHHHHH-HHHHCCSCEEEEECS
T ss_pred -hcCCEEEEEcCCCcccCCCcChHHHHHHHHH-HHhhCCCCCEEEEee
Confidence 3579999988754311100112 34566777 678898877776544
No 382
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=92.84 E-value=0.16 Score=44.82 Aligned_cols=95 Identities=18% Similarity=0.181 Sum_probs=58.8
Q ss_pred CeEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-CCCceeEEE
Q 025141 104 KTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYDVII 180 (257)
Q Consensus 104 ~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~-~~~~fDvIi 180 (257)
++||+.|+ |.|..+.++++..+..+|++++.+++-.+.+++.+... .-+.....|..+.+.. ..+.+|+++
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~------~~~d~~~~~~~~~~~~~~~~~~d~vi 235 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFD------AAINYKKDNVAEQLRESCPAGVDVYF 235 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCS------EEEETTTSCHHHHHHHHCTTCEEEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc------eEEecCchHHHHHHHHhcCCCCCEEE
Confidence 89999997 44556666666665448999999998888777633211 0011111233334432 223799998
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
.... .+.++. +.+.|+++|.++.-
T Consensus 236 ~~~G-------------~~~~~~-~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 236 DNVG-------------GNISDT-VISQMNENSHIILC 259 (357)
T ss_dssp ESCC-------------HHHHHH-HHHTEEEEEEEEEC
T ss_pred ECCC-------------HHHHHH-HHHHhccCcEEEEE
Confidence 6542 133555 56789999998863
No 383
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=92.80 E-value=0.8 Score=40.81 Aligned_cols=131 Identities=18% Similarity=0.142 Sum_probs=75.2
Q ss_pred CCCeEEEEeccchHH--HHHHHhcCCCcEEEEEECCHHHHHHHHhhhh----hccCCCCCCCeEEEEcchHHHHhcCCCc
Q 025141 102 NPKTIFIMGGGEGST--AREILRHKTVEKVVMCDIDEEVVEFCKSYLV----VNKEAFSDPRLELVINDARAELESRKES 175 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~--~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~----~~~~~~~~~rv~i~~~Da~~~l~~~~~~ 175 (257)
...+|.+||+|.=+. +..+++. + .+|+.++.+++.++..++.-. +++..+ .+++++ ..|..+.+ +.
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~-G-~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l-~~~i~~-t~d~~ea~----~~ 99 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARK-G-QKVRLWSYESDHVDEMQAEGVNNRYLPNYPF-PETLKA-YCDLKASL----EG 99 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTT-T-CCEEEECSCHHHHHHHHHHSSBTTTBTTCCC-CTTEEE-ESCHHHHH----TT
T ss_pred cCCeEEEECccHHHHHHHHHHHHC-C-CeEEEEeCCHHHHHHHHHcCCCcccCCCCcc-CCCeEE-ECCHHHHH----hc
Confidence 346899999986443 4444443 3 479999999998887765321 111111 234443 34554444 35
Q ss_pred eeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCceEEEeecCccc
Q 025141 176 YDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGCCALFSSYSF 255 (257)
Q Consensus 176 fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~~~~~ 255 (257)
.|+|++-.+. ...++.++. ++..|+|+-+++...... ... . ..+.+.+++.+|.......+.|+|
T Consensus 100 aDvVilaVp~---------~~~~~vl~~-i~~~l~~~~ivvs~~kGi---~~~-t-~~~se~i~~~l~~~~~~vlsgP~~ 164 (356)
T 3k96_A 100 VTDILIVVPS---------FAFHEVITR-MKPLIDAKTRIAWGTKGL---AKG-S-RLLHEVVATELGQVPMAVISGPSL 164 (356)
T ss_dssp CCEEEECCCH---------HHHHHHHHH-HGGGCCTTCEEEECCCSC---BTT-T-BCHHHHHHHHHCSCCEEEEESSCC
T ss_pred CCEEEECCCH---------HHHHHHHHH-HHHhcCCCCEEEEEeCCC---CcC-c-cCHHHHHHHHcCCCCEEEEECccH
Confidence 7999987542 135678888 788999888766432211 111 1 233444556565443444455554
No 384
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=92.70 E-value=0.19 Score=44.13 Aligned_cols=95 Identities=15% Similarity=0.195 Sum_probs=59.6
Q ss_pred CCCeEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-C-CCcee
Q 025141 102 NPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-R-KESYD 177 (257)
Q Consensus 102 ~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~-~-~~~fD 177 (257)
+.++||++|+ |.|..+.++++..+ .+|++++.+++-.+.+++. .. +.-+.....|..+.+++ . ...+|
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G-~~Vi~~~~~~~~~~~~~~~-ga------~~~~d~~~~~~~~~~~~~~~~~~~d 237 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFG-ARVIATAGSEDKLRRAKAL-GA------DETVNYTHPDWPKEVRRLTGGKGAD 237 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHH-TC------SEEEETTSTTHHHHHHHHTTTTCEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHhc-CC------CEEEcCCcccHHHHHHHHhCCCCce
Confidence 4589999997 56677777777666 4899999999988888763 21 10011111233333432 2 24799
Q ss_pred EEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 178 vIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
+|+.... +. .++. +.+.|+++|.++.-
T Consensus 238 ~vi~~~g-~~------------~~~~-~~~~l~~~G~~v~~ 264 (343)
T 2eih_A 238 KVVDHTG-AL------------YFEG-VIKATANGGRIAIA 264 (343)
T ss_dssp EEEESSC-SS------------SHHH-HHHHEEEEEEEEES
T ss_pred EEEECCC-HH------------HHHH-HHHhhccCCEEEEE
Confidence 9986643 11 1344 45678999988764
No 385
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=92.51 E-value=1.1 Score=43.94 Aligned_cols=45 Identities=13% Similarity=0.062 Sum_probs=34.3
Q ss_pred CCeEEEEeccchHHHHHHHhcC-----CCcEEEEEECCHHHHHHHHhhhh
Q 025141 103 PKTIFIMGGGEGSTAREILRHK-----TVEKVVMCDIDEEVVEFCKSYLV 147 (257)
Q Consensus 103 ~~~VL~IG~G~G~~~~~l~~~~-----~~~~v~~VEid~~vi~~a~~~~~ 147 (257)
..+|+||-||.|++..=+.+.. ....+.++|+|+..++.-+.+++
T Consensus 212 ~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp 261 (784)
T 4ft4_B 212 TATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHP 261 (784)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCT
T ss_pred CCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCC
Confidence 3579999999999876554421 13467899999999999988764
No 386
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=92.29 E-value=0.15 Score=45.11 Aligned_cols=96 Identities=19% Similarity=0.294 Sum_probs=59.8
Q ss_pred CCCCeEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-CCCcee
Q 025141 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYD 177 (257)
Q Consensus 101 ~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~-~~~~fD 177 (257)
.+.++||++|+ |.|..+.++++..+ .+|++++.+++-.+.+++. .. +.-+.....|..+.++. ....+|
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~l-Ga------~~~~~~~~~~~~~~~~~~~~~g~D 237 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFG-AEVYATAGSTGKCEACERL-GA------KRGINYRSEDFAAVIKAETGQGVD 237 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHH-TC------SEEEETTTSCHHHHHHHHHSSCEE
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhc-CC------CEEEeCCchHHHHHHHHHhCCCce
Confidence 34689999964 45667777787766 4899999999999888874 11 10011111233333322 246799
Q ss_pred EEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 178 vIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
+|+..... + .++. +.+.|+++|.++.-
T Consensus 238 vvid~~g~-----~--------~~~~-~~~~l~~~G~iv~~ 264 (353)
T 4dup_A 238 IILDMIGA-----A--------YFER-NIASLAKDGCLSII 264 (353)
T ss_dssp EEEESCCG-----G--------GHHH-HHHTEEEEEEEEEC
T ss_pred EEEECCCH-----H--------HHHH-HHHHhccCCEEEEE
Confidence 98865421 1 2344 46789999988754
No 387
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=92.22 E-value=0.85 Score=40.88 Aligned_cols=96 Identities=19% Similarity=0.335 Sum_probs=56.9
Q ss_pred CCCeEEEEeccchH-HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEE---cchHHHHhcCCCcee
Q 025141 102 NPKTIFIMGGGEGS-TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVI---NDARAELESRKESYD 177 (257)
Q Consensus 102 ~~~~VL~IG~G~G~-~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~---~Da~~~l~~~~~~fD 177 (257)
.+++|+++|+|.=+ .+...++..+. +|+++|.+++-.+.+++.+.. .+.... .|..+.+ ...|
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~--------~~~~~~~~~~~l~~~l----~~aD 233 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEFCG--------RIHTRYSSAYELEGAV----KRAD 233 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTT--------SSEEEECCHHHHHHHH----HHCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhcCC--------eeEeccCCHHHHHHHH----cCCC
Confidence 47899999985432 23333444454 899999999988877764431 111211 2223333 3689
Q ss_pred EEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEE
Q 025141 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (257)
Q Consensus 178 vIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~ 217 (257)
+|+.....|.. ....+.+.+. .+.|+|+|+++.
T Consensus 234 vVi~~~~~p~~--~t~~li~~~~-----l~~mk~g~~iV~ 266 (377)
T 2vhw_A 234 LVIGAVLVPGA--KAPKLVSNSL-----VAHMKPGAVLVD 266 (377)
T ss_dssp EEEECCCCTTS--CCCCCBCHHH-----HTTSCTTCEEEE
T ss_pred EEEECCCcCCC--CCcceecHHH-----HhcCCCCcEEEE
Confidence 99986643331 1124555543 346789998763
No 388
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=92.14 E-value=0.16 Score=44.22 Aligned_cols=96 Identities=11% Similarity=0.069 Sum_probs=58.6
Q ss_pred CCCeEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-C-CCcee
Q 025141 102 NPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-R-KESYD 177 (257)
Q Consensus 102 ~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~-~-~~~fD 177 (257)
..++||+.|+ |.|..+.++++..+ .+|++++.+++-.+.+++. .. +.-+.....|..+.+.+ . ...+|
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G-~~V~~~~~~~~~~~~~~~~-g~------~~~~~~~~~~~~~~~~~~~~~~~~D 211 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALG-AKLIGTVGTAQKAQSALKA-GA------WQVINYREEDLVERLKEITGGKKVR 211 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHHH-TC------SEEEETTTSCHHHHHHHHTTTCCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHc-CC------CEEEECCCccHHHHHHHHhCCCCce
Confidence 4689999994 55566666666555 4899999999888888763 21 00000001233333332 2 34699
Q ss_pred EEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 178 vIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+|+.... + +.++. +.+.|+++|.++.-.
T Consensus 212 ~vi~~~g------~-------~~~~~-~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 212 VVYDSVG------R-------DTWER-SLDCLQRRGLMVSFG 239 (327)
T ss_dssp EEEECSC------G-------GGHHH-HHHTEEEEEEEEECC
T ss_pred EEEECCc------h-------HHHHH-HHHHhcCCCEEEEEe
Confidence 9986643 1 12455 567899999988643
No 389
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=91.93 E-value=0.33 Score=42.64 Aligned_cols=93 Identities=17% Similarity=0.320 Sum_probs=59.8
Q ss_pred CCCCeEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc--CCCce
Q 025141 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES--RKESY 176 (257)
Q Consensus 101 ~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~--~~~~f 176 (257)
.+.++||++|+ |.|..+.++++..+. +|+++ .+++-.+.+++. .. +. +. ...|..+.++. ....+
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~l-Ga------~~-i~-~~~~~~~~~~~~~~~~g~ 217 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRDL-GA------TP-ID-ASREPEDYAAEHTAGQGF 217 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHHH-TS------EE-EE-TTSCHHHHHHHHHTTSCE
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHc-CC------CE-ec-cCCCHHHHHHHHhcCCCc
Confidence 34689999994 557777888887664 89999 888888888763 21 11 22 22344444433 23579
Q ss_pred eEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 177 DvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
|+|+-... . +.+.. +.+.|+++|.++.-
T Consensus 218 D~vid~~g-----~--------~~~~~-~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 218 DLVYDTLG-----G--------PVLDA-SFSAVKRFGHVVSC 245 (343)
T ss_dssp EEEEESSC-----T--------HHHHH-HHHHEEEEEEEEES
T ss_pred eEEEECCC-----c--------HHHHH-HHHHHhcCCeEEEE
Confidence 99885432 1 23455 46789999998864
No 390
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=91.73 E-value=3.3 Score=43.26 Aligned_cols=140 Identities=9% Similarity=0.075 Sum_probs=86.4
Q ss_pred CCeEEEEeccchHHHHHHHhcCCC-cEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc----------
Q 025141 103 PKTIFIMGGGEGSTAREILRHKTV-EKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES---------- 171 (257)
Q Consensus 103 ~~~VL~IG~G~G~~~~~l~~~~~~-~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~---------- 171 (257)
.-++++|-+|.|++..-+.+. +. ..+.++|+|+...+.-+.+++ ...++.+|..++++.
T Consensus 851 ~l~viDLFsG~GGlslGfe~A-G~~~vv~avEid~~A~~ty~~N~p---------~~~~~~~DI~~l~~~~~~gdi~~~~ 920 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQA-GISETLWAIEMWDPAAQAFRLNNP---------GTTVFTEDCNVLLKLVMAGEVTNSL 920 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHT-TSEEEEEEECCSHHHHHHHHHHCT---------TSEEECSCHHHHHHHHTTTCSBCSS
T ss_pred CceEEecccCccHHHHHHHHC-CCCceEEEEECCHHHHHHHHHhCC---------CCcEeeccHHHHhHhhhccchhhhh
Confidence 457999999999999887764 44 468899999999999887753 345777887766421
Q ss_pred -----CCCceeEEEEcCCC-CCC-CCcc---------cCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHH
Q 025141 172 -----RKESYDVIIGDLAD-PIE-GGPC---------YKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIY 235 (257)
Q Consensus 172 -----~~~~fDvIi~D~~~-~~~-~~p~---------~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~ 235 (257)
.....|+|+--++- +.+ .+.. ..| -.+|++. + +.++|.-+++=|+.....+.....+..++
T Consensus 921 ~~~lp~~~~vDvl~GGpPCQ~FS~agr~~~~~~~d~R~~L-~~~~lri-v-~~~rPk~fv~ENV~glls~~~g~~~~~il 997 (1330)
T 3av4_A 921 GQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSL-VVSFLSY-C-DYYRPRFFLLENVRNFVSYRRSMVLKLTL 997 (1330)
T ss_dssp CCBCCCTTTCSEEEECCCCTTTCSSSCCCHHHHHHHHHSH-HHHHHHH-H-HHHCCSEEEEEEEGGGGTTTTTHHHHHHH
T ss_pred hhhccccCccceEEecCCCcccccccccccccccchhhHH-HHHHHHH-H-HHhcCcEEEEeccHHHhccCccHHHHHHH
Confidence 01368999988763 221 1110 011 2356664 3 56899877765652211122345677787
Q ss_pred HHHhhhCCceEEEeecCccc
Q 025141 236 NTLRQVFKCGCCALFSSYSF 255 (257)
Q Consensus 236 ~~l~~~F~~v~~~~~~~~~~ 255 (257)
+.|.+.-=.+.........|
T Consensus 998 ~~L~~lGY~v~~~vLnA~dy 1017 (1330)
T 3av4_A 998 RCLVRMGYQCTFGVLQAGQY 1017 (1330)
T ss_dssp HHHHHHTCEEEEEEEEGGGG
T ss_pred HHHHhcCCeeeEEEecHHHc
Confidence 87776533344333343333
No 391
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=91.57 E-value=0.18 Score=44.58 Aligned_cols=96 Identities=13% Similarity=0.181 Sum_probs=58.3
Q ss_pred CCCeEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-C-CCcee
Q 025141 102 NPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-R-KESYD 177 (257)
Q Consensus 102 ~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~-~-~~~fD 177 (257)
+.++||++|+ |.|..+..+++..+ .+|++++.+++-.+.+++. .. +.-+.....|..+.+.+ . ...+|
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~-g~------~~~~~~~~~~~~~~~~~~~~~~~~d 233 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAG-AIPLVTAGSQKKLQMAEKL-GA------AAGFNYKKEDFSEATLKFTKGAGVN 233 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHH-TC------SEEEETTTSCHHHHHHHHTTTSCEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHc-CC------cEEEecCChHHHHHHHHHhcCCCce
Confidence 4688999984 55666667777665 4899999999988888653 21 00001011233333332 2 24699
Q ss_pred EEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 178 vIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+|+..... + .++. +.+.|+++|.++.-.
T Consensus 234 ~vi~~~G~-----~--------~~~~-~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 234 LILDCIGG-----S--------YWEK-NVNCLALDGRWVLYG 261 (354)
T ss_dssp EEEESSCG-----G--------GHHH-HHHHEEEEEEEEECC
T ss_pred EEEECCCc-----h--------HHHH-HHHhccCCCEEEEEe
Confidence 99866431 1 1344 456789999988643
No 392
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=91.48 E-value=0.29 Score=43.31 Aligned_cols=96 Identities=17% Similarity=0.114 Sum_probs=58.8
Q ss_pred CCCCeEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc--CCCce
Q 025141 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES--RKESY 176 (257)
Q Consensus 101 ~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~--~~~~f 176 (257)
.+.++||+.|+ |.|..+.++++..+ .+|++++.+++-.+.+++.-. +.-+.....|..+.+.+ ....+
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~ga-------~~~~d~~~~~~~~~~~~~~~~~~~ 240 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYG-LKILGTAGTEEGQKIVLQNGA-------HEVFNHREVNYIDKIKKYVGEKGI 240 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTTC-------SEEEETTSTTHHHHHHHHHCTTCE
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHcCC-------CEEEeCCCchHHHHHHHHcCCCCc
Confidence 34689999996 55666677777666 489999999998888775411 10011111233333332 23479
Q ss_pred eEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 177 DvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
|+|+.... . +.+.. ..+.|+++|.++.-
T Consensus 241 D~vi~~~G-----~--------~~~~~-~~~~l~~~G~iv~~ 268 (351)
T 1yb5_A 241 DIIIEMLA-----N--------VNLSK-DLSLLSHGGRVIVV 268 (351)
T ss_dssp EEEEESCH-----H--------HHHHH-HHHHEEEEEEEEEC
T ss_pred EEEEECCC-----h--------HHHHH-HHHhccCCCEEEEE
Confidence 99986532 1 12445 46789999988754
No 393
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=91.38 E-value=0.53 Score=39.81 Aligned_cols=35 Identities=29% Similarity=0.406 Sum_probs=24.9
Q ss_pred CCCeEEEEeccc-hHHHHHHHhcCCCcEEEEEECCH
Q 025141 102 NPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDE 136 (257)
Q Consensus 102 ~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~ 136 (257)
..++||++|+|+ |+.....+...++.+++.+|-|.
T Consensus 27 ~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 27 LDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp HTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred hcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 457999999974 44444434446788999998873
No 394
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=91.33 E-value=2.7 Score=38.91 Aligned_cols=110 Identities=15% Similarity=0.149 Sum_probs=61.7
Q ss_pred CeEEEEeccchH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhhh-hhccCCC-------CCCCeEEEEcchHHHHhcCC
Q 025141 104 KTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYL-VVNKEAF-------SDPRLELVINDARAELESRK 173 (257)
Q Consensus 104 ~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~-~~~~~~~-------~~~rv~i~~~Da~~~l~~~~ 173 (257)
.+|.+||+|.=+ ++..+++....-+|+++|++++.++..++.. +.....+ ...++++ ..|..+-+
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~-t~~~~~~~---- 84 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFF-SSDIPKAI---- 84 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE-ESCHHHHH----
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEE-ECCHHHHh----
Confidence 589999998544 4555555421248999999999988776521 1000000 0012332 23433333
Q ss_pred CceeEEEEcCCCCCCCC-----cccCC-chHHHHHHHHcCcCCCCcEEEEec
Q 025141 174 ESYDVIIGDLADPIEGG-----PCYKL-YTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 174 ~~fDvIi~D~~~~~~~~-----p~~~L-~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
...|+||+..+.|.... -...+ +..+..+. +.+.|+++-+++..+
T Consensus 85 ~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~-i~~~l~~g~iVV~~S 135 (481)
T 2o3j_A 85 AEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRT-IAQYAGGPKIVVEKS 135 (481)
T ss_dssp HHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHH-HHHHCCSCEEEEECS
T ss_pred hcCCEEEEecCCccccccccccCCCcHHHHHHHHHH-HHHhCCCCCEEEECC
Confidence 24799999876543100 00112 24566777 678899887776443
No 395
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=91.27 E-value=1.6 Score=40.14 Aligned_cols=101 Identities=18% Similarity=0.293 Sum_probs=61.8
Q ss_pred CeEEEEeccch--HHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhh-----------hccCCCCCCCeEEEEcchHHHHh
Q 025141 104 KTIFIMGGGEG--STAREILRHKTVEKVVMCDIDEEVVEFCKSYLV-----------VNKEAFSDPRLELVINDARAELE 170 (257)
Q Consensus 104 ~~VL~IG~G~G--~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~-----------~~~~~~~~~rv~i~~~Da~~~l~ 170 (257)
++|.+||+|.= +++..+++. + -+|+++|++++.++.+++... ...........++ ..|. +-+
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~-G-~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~-~~~- 112 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARV-G-ISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSST-KEL- 112 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-T-CEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCG-GGG-
T ss_pred CEEEEECcCHHHHHHHHHHHhC-C-CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCH-HHH-
Confidence 67999999962 345555553 4 489999999999887766421 1110001112233 4453 222
Q ss_pred cCCCceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecC
Q 025141 171 SRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (257)
Q Consensus 171 ~~~~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~ 220 (257)
...|+||...++.. -...+.++. +...++|+.+++.++.
T Consensus 113 ---~~aDlVIeaVpe~~-------~~k~~v~~~-l~~~~~~~~ii~snTs 151 (463)
T 1zcj_A 113 ---STVDLVVEAVFEDM-------NLKKKVFAE-LSALCKPGAFLCTNTS 151 (463)
T ss_dssp ---TTCSEEEECCCSCH-------HHHHHHHHH-HHHHSCTTCEEEECCS
T ss_pred ---CCCCEEEEcCCCCH-------HHHHHHHHH-HHhhCCCCeEEEeCCC
Confidence 45799999875311 123567777 6788999988887653
No 396
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=91.22 E-value=0.35 Score=40.46 Aligned_cols=80 Identities=15% Similarity=0.230 Sum_probs=45.8
Q ss_pred HHHHHHHhhcCCCCCeEEEEeccchHHH--HHHHhcCCCcEEEEEE--CCHHHHHHHHhhhhhccCCCCCCCeEEEEcch
Q 025141 90 ESLVHPALLHHPNPKTIFIMGGGEGSTA--REILRHKTVEKVVMCD--IDEEVVEFCKSYLVVNKEAFSDPRLELVINDA 165 (257)
Q Consensus 90 e~l~~~~l~~~~~~~~VL~IG~G~G~~~--~~l~~~~~~~~v~~VE--id~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da 165 (257)
+.+...|+....+.++||++|+|.=+.. +.+++. + .+|++|+ +++++.+++.+ .+++++..+.
T Consensus 18 ~~~~~~Pifl~L~gk~VLVVGgG~va~~ka~~Ll~~-G-A~VtVvap~~~~~l~~l~~~-----------~~i~~i~~~~ 84 (223)
T 3dfz_A 18 EGRHMYTVMLDLKGRSVLVVGGGTIATRRIKGFLQE-G-AAITVVAPTVSAEINEWEAK-----------GQLRVKRKKV 84 (223)
T ss_dssp ----CCEEEECCTTCCEEEECCSHHHHHHHHHHGGG-C-CCEEEECSSCCHHHHHHHHT-----------TSCEEECSCC
T ss_pred cccCccccEEEcCCCEEEEECCCHHHHHHHHHHHHC-C-CEEEEECCCCCHHHHHHHHc-----------CCcEEEECCC
Confidence 4555678888888999999999865543 334443 3 5788885 44444444432 3455554332
Q ss_pred HHHHhcCCCceeEEEEcCCC
Q 025141 166 RAELESRKESYDVIIGDLAD 185 (257)
Q Consensus 166 ~~~l~~~~~~fDvIi~D~~~ 185 (257)
. ...-..+|+||....+
T Consensus 85 ~---~~dL~~adLVIaAT~d 101 (223)
T 3dfz_A 85 G---EEDLLNVFFIVVATND 101 (223)
T ss_dssp C---GGGSSSCSEEEECCCC
T ss_pred C---HhHhCCCCEEEECCCC
Confidence 1 1222568999876543
No 397
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=91.11 E-value=1.9 Score=36.38 Aligned_cols=90 Identities=16% Similarity=0.100 Sum_probs=54.3
Q ss_pred CeEEEEeccch--HHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCC-ceeEEE
Q 025141 104 KTIFIMGGGEG--STAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKE-SYDVII 180 (257)
Q Consensus 104 ~~VL~IG~G~G--~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~-~fDvIi 180 (257)
++|.+||+|.= .++..+.+.....+|+++|.+++.++.++++ .. . . . ...|..+.+ . ..|+|+
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~-g~-----~-~--~-~~~~~~~~~----~~~aDvVi 67 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL-GI-----I-D--E-GTTSIAKVE----DFSPDFVM 67 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT-TS-----C-S--E-EESCGGGGG----GTCCSEEE
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHC-CC-----c-c--c-ccCCHHHHh----cCCCCEEE
Confidence 47999998853 2344444432123799999999988776643 11 0 0 1 123333333 3 689999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEE
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~ 217 (257)
+-.+.. ...+.++. +...|+++.+++.
T Consensus 68 lavp~~---------~~~~v~~~-l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 68 LSSPVR---------TFREIAKK-LSYILSEDATVTD 94 (281)
T ss_dssp ECSCHH---------HHHHHHHH-HHHHSCTTCEEEE
T ss_pred EcCCHH---------HHHHHHHH-HHhhCCCCcEEEE
Confidence 876421 23466777 6778898886654
No 398
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=90.91 E-value=1.1 Score=35.17 Aligned_cols=95 Identities=17% Similarity=0.135 Sum_probs=56.0
Q ss_pred CCeEEEEeccchH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchH--HHHhcC--CCce
Q 025141 103 PKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDAR--AELESR--KESY 176 (257)
Q Consensus 103 ~~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~--~~l~~~--~~~f 176 (257)
..+|+++|+|.=+ +++.+.+..+ .+|+++|.|++-++.+++. .+.++.+|+. +.+... -+.+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g-~~V~vid~~~~~~~~~~~~-----------g~~~~~gd~~~~~~l~~~~~~~~a 106 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYG-KISLGIEIREEAAQQHRSE-----------GRNVISGDATDPDFWERILDTGHV 106 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHC-SCEEEEESCHHHHHHHHHT-----------TCCEEECCTTCHHHHHTBCSCCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccC-CeEEEEECCHHHHHHHHHC-----------CCCEEEcCCCCHHHHHhccCCCCC
Confidence 4689999987433 2334433203 4799999999887776642 2345556653 334443 4679
Q ss_pred eEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 177 DvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
|+|+.-.++.. .+...... .+.+.|++.++...
T Consensus 107 d~vi~~~~~~~--------~~~~~~~~--~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 107 KLVLLAMPHHQ--------GNQTALEQ--LQRRNYKGQIAAIA 139 (183)
T ss_dssp CEEEECCSSHH--------HHHHHHHH--HHHTTCCSEEEEEE
T ss_pred CEEEEeCCChH--------HHHHHHHH--HHHHCCCCEEEEEE
Confidence 99998654311 12233333 34667777777654
No 399
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=90.89 E-value=0.67 Score=41.15 Aligned_cols=95 Identities=17% Similarity=0.298 Sum_probs=56.8
Q ss_pred CCCeEEEEe--ccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025141 102 NPKTIFIMG--GGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (257)
Q Consensus 102 ~~~~VL~IG--~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvI 179 (257)
+.++||++| +|.|..+.++++..+ .+|++++ +++-.+.+++. .. +.-+.....|..+.+... ..+|+|
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~G-a~Vi~~~-~~~~~~~~~~l-Ga------~~v~~~~~~~~~~~~~~~-~g~D~v 252 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAWD-AHVTAVC-SQDASELVRKL-GA------DDVIDYKSGSVEEQLKSL-KPFDFI 252 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE-CGGGHHHHHHT-TC------SEEEETTSSCHHHHHHTS-CCBSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCC-CEEEEEe-ChHHHHHHHHc-CC------CEEEECCchHHHHHHhhc-CCCCEE
Confidence 457999999 455667778888766 4888888 66666777653 11 100111112334444432 469999
Q ss_pred EEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
+-.... + ...+.. ..+.|+++|.++.-
T Consensus 253 id~~g~-----~------~~~~~~-~~~~l~~~G~iv~~ 279 (375)
T 2vn8_A 253 LDNVGG-----S------TETWAP-DFLKKWSGATYVTL 279 (375)
T ss_dssp EESSCT-----T------HHHHGG-GGBCSSSCCEEEES
T ss_pred EECCCC-----h------hhhhHH-HHHhhcCCcEEEEe
Confidence 855431 1 012344 56789999998864
No 400
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=90.86 E-value=0.2 Score=43.54 Aligned_cols=71 Identities=18% Similarity=0.159 Sum_probs=45.5
Q ss_pred CceeEEEEcCCCCCCCCcc-----cCCchHH-HHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCceEE
Q 025141 174 ESYDVIIGDLADPIEGGPC-----YKLYTKS-FYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCGCC 247 (257)
Q Consensus 174 ~~fDvIi~D~~~~~~~~p~-----~~L~t~e-f~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~ 247 (257)
++||+|++|...+.. +.. .+.-... ..+. +.++|+|||.+++..-. ...+..+.+...|++.|..|+.
T Consensus 205 ~k~DvV~SDMApn~s-Gh~yqQC~DHarii~Lal~f-A~~vLkPGGtfV~Kvyg----gaDr~se~lv~~LaR~F~~Vr~ 278 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYK-YHHYQQCEDHAIKLSMLTKK-ACLHLNPGGTCVSIGYG----YADRASESIIGAIARQFKFSRV 278 (320)
T ss_dssp CCEEEEEEECCCCCC-SCHHHHHHHHHHHHHHTHHH-HGGGEEEEEEEEEEECC----CCSHHHHHHHHHHHTTEEEEEE
T ss_pred CcCCEEEEcCCCCCC-CccccccchHHHHHHHHHHH-HHHhcCCCceEEEEEec----CCcccHHHHHHHHHHhcceeee
Confidence 679999999875442 211 0000001 2333 46899999999987511 1234567899999999998887
Q ss_pred Eee
Q 025141 248 ALF 250 (257)
Q Consensus 248 ~~~ 250 (257)
..-
T Consensus 279 vKP 281 (320)
T 2hwk_A 279 CKP 281 (320)
T ss_dssp ECC
T ss_pred eCC
Confidence 543
No 401
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=90.67 E-value=0.73 Score=36.50 Aligned_cols=105 Identities=16% Similarity=0.248 Sum_probs=68.1
Q ss_pred cCCCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcC----CC
Q 025141 99 HHPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESR----KE 174 (257)
Q Consensus 99 ~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~----~~ 174 (257)
...-+.-||++|.|.|-+=.++....+..+|.++|-.-. -| + . -.-|.-.++.+|+++-+... ..
T Consensus 37 v~~~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~------~h-p--~--~~P~~e~~ilGdi~~tL~~~~~r~g~ 105 (174)
T 3iht_A 37 TAGLSGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVA------SH-P--D--STPPEAQLILGDIRETLPATLERFGA 105 (174)
T ss_dssp TTTCCSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCC------CC-G--G--GCCCGGGEEESCHHHHHHHHHHHHCS
T ss_pred hcCCCCceEEecCCCChhHHHHHHhCCCCcEEEEEeeec------cC-C--C--CCCchHheecccHHHHHHHHHHhcCC
Confidence 344567899999999999888888767789999986211 11 1 0 01245578999999988653 34
Q ss_pred ceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEE
Q 025141 175 SYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (257)
Q Consensus 175 ~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~ 217 (257)
+--++=.|.-.+. +.....+..++.-.+..+|.|||+++-
T Consensus 106 ~a~LaHaD~G~g~---~~~d~a~a~~lsplI~~~la~GGi~vS 145 (174)
T 3iht_A 106 TASLVHADLGGHN---REKNDRFARLISPLIEPHLAQGGLMVS 145 (174)
T ss_dssp CEEEEEECCCCSC---HHHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred ceEEEEeecCCCC---cchhHHHHHhhhHHHHHHhcCCcEEEe
Confidence 4555555654332 222233334444436899999998874
No 402
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=90.65 E-value=0.7 Score=41.91 Aligned_cols=42 Identities=24% Similarity=0.266 Sum_probs=30.8
Q ss_pred CCCeEEEEeccchHH-HHHHHhcCCCcEEEEEECCHHHHHHHHh
Q 025141 102 NPKTIFIMGGGEGST-AREILRHKTVEKVVMCDIDEEVVEFCKS 144 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~-~~~l~~~~~~~~v~~VEid~~vi~~a~~ 144 (257)
.+++|+++|+|.=+. +..+++..+ .+|+++|.++...+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G-a~V~v~D~~~~~~~~~~~ 213 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLG-AIVRAFDTRPEVKEQVQS 213 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCGGGHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHH
Confidence 478999999975443 344455455 489999999998877755
No 403
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=90.61 E-value=0.79 Score=40.68 Aligned_cols=96 Identities=11% Similarity=0.206 Sum_probs=59.2
Q ss_pred CCCCeEEEEecc--chHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-CCCcee
Q 025141 101 PNPKTIFIMGGG--EGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYD 177 (257)
Q Consensus 101 ~~~~~VL~IG~G--~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~-~~~~fD 177 (257)
.+.++||++|++ .|.++.++++..+. +|+++- +++-.+.++++-. +.-+.....|..+.+++ +++++|
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~~-~~~~~~~~~~lGa-------~~vi~~~~~~~~~~v~~~t~g~~d 233 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATC-SPHNFDLAKSRGA-------EEVFDYRAPNLAQTIRTYTKNNLR 233 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHHTTC-------SEEEETTSTTHHHHHHHHTTTCCC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe-CHHHHHHHHHcCC-------cEEEECCCchHHHHHHHHccCCcc
Confidence 456899999983 67788888887764 777774 7877788876411 11111112344455543 345699
Q ss_pred EEEEcCCCCCCCCcccCCchHHHHHHHHcCcC-CCCcEEEEe
Q 025141 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRL-NPEGIFVTQ 218 (257)
Q Consensus 178 vIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L-~pgGil~~~ 218 (257)
+|+-... . .+.++. +.+.| +++|.++.-
T Consensus 234 ~v~d~~g-----~-------~~~~~~-~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 234 YALDCIT-----N-------VESTTF-CFAAIGRAGGHYVSL 262 (371)
T ss_dssp EEEESSC-----S-------HHHHHH-HHHHSCTTCEEEEES
T ss_pred EEEECCC-----c-------hHHHHH-HHHHhhcCCCEEEEE
Confidence 9885432 1 133455 45677 689988753
No 404
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=90.48 E-value=0.71 Score=41.44 Aligned_cols=42 Identities=19% Similarity=0.273 Sum_probs=30.8
Q ss_pred CCCeEEEEeccchHH-HHHHHhcCCCcEEEEEECCHHHHHHHHh
Q 025141 102 NPKTIFIMGGGEGST-AREILRHKTVEKVVMCDIDEEVVEFCKS 144 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~-~~~l~~~~~~~~v~~VEid~~vi~~a~~ 144 (257)
.+++|+++|+|.=+. +..+++..+. +|+++|.++...+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 578999999975443 3444554554 79999999988777766
No 405
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=89.70 E-value=1.5 Score=31.20 Aligned_cols=69 Identities=17% Similarity=0.186 Sum_probs=41.1
Q ss_pred CCeEEEEeccchH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHH--HHhcCCCceeE
Q 025141 103 PKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA--ELESRKESYDV 178 (257)
Q Consensus 103 ~~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~--~l~~~~~~fDv 178 (257)
.++|+++|+|.=+ ++..+++. +..+|++++.+++-.+..+. ..++++..|..+ .+...-..+|+
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~-g~~~v~~~~r~~~~~~~~~~-----------~~~~~~~~d~~~~~~~~~~~~~~d~ 72 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTS-SNYSVTVADHDLAALAVLNR-----------MGVATKQVDAKDEAGLAKALGGFDA 72 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHC-SSEEEEEEESCHHHHHHHHT-----------TTCEEEECCTTCHHHHHHHTTTCSE
T ss_pred cCeEEEECCCHHHHHHHHHHHhC-CCceEEEEeCCHHHHHHHHh-----------CCCcEEEecCCCHHHHHHHHcCCCE
Confidence 3689999984221 23344443 43589999999987766551 234455555432 22222247899
Q ss_pred EEEcC
Q 025141 179 IIGDL 183 (257)
Q Consensus 179 Ii~D~ 183 (257)
|+...
T Consensus 73 vi~~~ 77 (118)
T 3ic5_A 73 VISAA 77 (118)
T ss_dssp EEECS
T ss_pred EEECC
Confidence 99875
No 406
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=89.65 E-value=0.73 Score=41.94 Aligned_cols=44 Identities=16% Similarity=0.183 Sum_probs=34.1
Q ss_pred CCCCeEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhh
Q 025141 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSY 145 (257)
Q Consensus 101 ~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~ 145 (257)
.+.++||++|+ |-|..+.++++..+ .++++++.+++-.+.+++.
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~G-a~vi~~~~~~~~~~~~~~l 264 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGG-GIPVAVVSSAQKEAAVRAL 264 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhc
Confidence 34689999996 45667778888766 5888889999988888764
No 407
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=89.58 E-value=8.3 Score=33.16 Aligned_cols=112 Identities=13% Similarity=0.105 Sum_probs=66.2
Q ss_pred CCCeEEEEeccchH--HHHHHHhcCCCcEEEEEECC--HHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCcee
Q 025141 102 NPKTIFIMGGGEGS--TAREILRHKTVEKVVMCDID--EEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYD 177 (257)
Q Consensus 102 ~~~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid--~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fD 177 (257)
...+|.+||+|.=+ ++..+++. +..+|+++|.+ ++..+.+++. .++ ...+..+.++ ..|
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~-G~~~V~~~dr~~~~~~~~~~~~~-----------g~~-~~~~~~e~~~----~aD 85 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQA-GAIDMAAYDAASAESWRPRAEEL-----------GVS-CKASVAEVAG----ECD 85 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHH-SCCEEEEECSSCHHHHHHHHHHT-----------TCE-ECSCHHHHHH----HCS
T ss_pred CCCEEEEECccHHHHHHHHHHHHC-CCCeEEEEcCCCCHHHHHHHHHC-----------CCE-EeCCHHHHHh----cCC
Confidence 34689999998533 45555554 32489999997 5666655542 112 1234444443 469
Q ss_pred EEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCce
Q 025141 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKCG 245 (257)
Q Consensus 178 vIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~F~~v 245 (257)
+||+-.+.+. ..+.++. +...|+++.+++ +..+. .+....++.+.+.+.++.+
T Consensus 86 vVi~~vp~~~---------~~~~~~~-l~~~l~~~~ivv-d~st~----~~~~~~~~~~~~~~~~~g~ 138 (312)
T 3qsg_A 86 VIFSLVTAQA---------ALEVAQQ-AGPHLCEGALYA-DFTSC----SPAVKRAIGDVISRHRPSA 138 (312)
T ss_dssp EEEECSCTTT---------HHHHHHH-HGGGCCTTCEEE-ECCCC----CHHHHHHHHHHHHHHCTTC
T ss_pred EEEEecCchh---------HHHHHHh-hHhhcCCCCEEE-EcCCC----CHHHHHHHHHHHHhhcCCC
Confidence 9999876432 2345677 688899887766 43221 2444556666666654333
No 408
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=89.57 E-value=2.3 Score=37.41 Aligned_cols=105 Identities=10% Similarity=0.131 Sum_probs=63.6
Q ss_pred CCCCeEEEEeccchH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhc------cCCCCC--------CCeEEEEcc
Q 025141 101 PNPKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVN------KEAFSD--------PRLELVIND 164 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~------~~~~~~--------~rv~i~~~D 164 (257)
|...+|.+||+|.=+ ++..++.. + -+|+.+|++++.++.++++.... ...... .+++. ..|
T Consensus 4 p~~~~VaViGaG~MG~giA~~~a~~-G-~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~-~~~ 80 (319)
T 3ado_A 4 PAAGDVLIVGSGLVGRSWAMLFASG-G-FRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTN 80 (319)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHT-T-CCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECC
T ss_pred CCCCeEEEECCcHHHHHHHHHHHhC-C-CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhccc-ccc
Confidence 456799999998644 34444443 4 48999999999988877654211 111111 12222 233
Q ss_pred hHHHHhcCCCceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecC
Q 025141 165 ARAELESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (257)
Q Consensus 165 a~~~l~~~~~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~ 220 (257)
..+.+ ...|+|+=..+... -.-++.|++ +.+.++|+-+|+.|+.
T Consensus 81 l~~a~----~~ad~ViEav~E~l-------~iK~~lf~~-l~~~~~~~aIlaSNTS 124 (319)
T 3ado_A 81 LAEAV----EGVVHIQECVPENL-------DLKRKIFAQ-LDSIVDDRVVLSSSSS 124 (319)
T ss_dssp HHHHT----TTEEEEEECCCSCH-------HHHHHHHHH-HHTTCCSSSEEEECCS
T ss_pred hHhHh----ccCcEEeeccccHH-------HHHHHHHHH-HHHHhhhcceeehhhh
Confidence 32322 45788886655311 124688898 7999999999998864
No 409
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=89.44 E-value=0.39 Score=40.54 Aligned_cols=34 Identities=21% Similarity=0.419 Sum_probs=24.1
Q ss_pred CCCeEEEEeccc-hHH-HHHHHhcCCCcEEEEEECCH
Q 025141 102 NPKTIFIMGGGE-GST-AREILRHKTVEKVVMCDIDE 136 (257)
Q Consensus 102 ~~~~VL~IG~G~-G~~-~~~l~~~~~~~~v~~VEid~ 136 (257)
..++||++|+|+ |+. +..|++ .++.+++.+|-|.
T Consensus 30 ~~~~VlVvG~Gg~G~~va~~La~-~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 30 KDSRVLIVGLGGLGCAASQYLAS-AGVGNLTLLDFDT 65 (249)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHH-HTCSEEEEECCCB
T ss_pred hCCeEEEEeeCHHHHHHHHHHHH-cCCCeEEEEcCCC
Confidence 357999999974 332 344444 4678999999996
No 410
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=89.37 E-value=2.6 Score=36.51 Aligned_cols=98 Identities=16% Similarity=0.238 Sum_probs=57.6
Q ss_pred CCCeEEEEeccchH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhh-hhhccCCCC-CCCeEEEEcchHHHHhcCCCcee
Q 025141 102 NPKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSY-LVVNKEAFS-DPRLELVINDARAELESRKESYD 177 (257)
Q Consensus 102 ~~~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~-~~~~~~~~~-~~rv~i~~~Da~~~l~~~~~~fD 177 (257)
...+|++||+|.=+ ++..+++. + .+|+.+ .+++.++..++. +........ ..++.. ..|.. .+ +.+|
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~-G-~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~-~~~~~-~~----~~~D 88 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARA-G-HEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSA-SSDPS-AV----QGAD 88 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHT-T-CEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEE-ESCGG-GG----TTCS
T ss_pred cCCcEEEECcCHHHHHHHHHHHHC-C-CeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeee-eCCHH-Hc----CCCC
Confidence 45689999998544 34455543 3 489999 999888777653 211100000 011111 23321 11 5689
Q ss_pred EEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 178 vIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
+|++-.+. ....+.++. ++..|+|+.+++..
T Consensus 89 ~vilavk~---------~~~~~~l~~-l~~~l~~~~~iv~~ 119 (318)
T 3hwr_A 89 LVLFCVKS---------TDTQSAALA-MKPALAKSALVLSL 119 (318)
T ss_dssp EEEECCCG---------GGHHHHHHH-HTTTSCTTCEEEEE
T ss_pred EEEEEccc---------ccHHHHHHH-HHHhcCCCCEEEEe
Confidence 99997542 135788888 79999999877654
No 411
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=89.36 E-value=2.1 Score=37.29 Aligned_cols=98 Identities=16% Similarity=0.199 Sum_probs=58.7
Q ss_pred CeEEEEeccchH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhh--hccCCCC-CCCeEEEEcchHHHHhcCCCceeE
Q 025141 104 KTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLV--VNKEAFS-DPRLELVINDARAELESRKESYDV 178 (257)
Q Consensus 104 ~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~--~~~~~~~-~~rv~i~~~Da~~~l~~~~~~fDv 178 (257)
.+|.+||+|.-+ ++..+.+. + .+|++++.+++.++..++... ..+.... ..++.....|..+.+ ..+|+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~-g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~D~ 78 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK-G-QSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV----KDADV 78 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-CEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH----TTCSE
T ss_pred CeEEEECCCHHHHHHHHHHHhC-C-CEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHH----hcCCE
Confidence 589999998633 34444443 3 479999999988877665422 1110000 001112334544433 36899
Q ss_pred EEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEE
Q 025141 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (257)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~ 217 (257)
|++-.+.. ...+.++. +...|+++.+++.
T Consensus 79 vi~~v~~~---------~~~~~~~~-l~~~l~~~~~vv~ 107 (359)
T 1bg6_A 79 ILIVVPAI---------HHASIAAN-IASYISEGQLIIL 107 (359)
T ss_dssp EEECSCGG---------GHHHHHHH-HGGGCCTTCEEEE
T ss_pred EEEeCCch---------HHHHHHHH-HHHhCCCCCEEEE
Confidence 99986531 13677888 7888999886654
No 412
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=89.23 E-value=5.5 Score=32.96 Aligned_cols=78 Identities=13% Similarity=0.106 Sum_probs=49.6
Q ss_pred CCCCeEEEEeccch--H---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------H
Q 025141 101 PNPKTIFIMGGGEG--S---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------L 169 (257)
Q Consensus 101 ~~~~~VL~IG~G~G--~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~------l 169 (257)
.+.+.||+.|++++ . +++.+++. + .+|++++.++...+.+++..... ...++.++..|..+. +
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~ 78 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEA-G-ARLIFTYAGERLEKSVHELAGTL----DRNDSIILPCDVTNDAEIETCF 78 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHT-T-CEEEEEESSGGGHHHHHHHHHTS----SSCCCEEEECCCSSSHHHHHHH
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHC-C-CEEEEecCchHHHHHHHHHHHhc----CCCCceEEeCCCCCHHHHHHHH
Confidence 35689999998632 2 45666664 4 58999998876666555544322 234788888776432 2
Q ss_pred hc---CCCceeEEEEcCC
Q 025141 170 ES---RKESYDVIIGDLA 184 (257)
Q Consensus 170 ~~---~~~~fDvIi~D~~ 184 (257)
+. ..++.|+++..+.
T Consensus 79 ~~~~~~~g~id~li~~Ag 96 (266)
T 3oig_A 79 ASIKEQVGVIHGIAHCIA 96 (266)
T ss_dssp HHHHHHHSCCCEEEECCC
T ss_pred HHHHHHhCCeeEEEEccc
Confidence 21 2257899999875
No 413
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=89.18 E-value=7.7 Score=33.01 Aligned_cols=102 Identities=18% Similarity=0.232 Sum_probs=54.2
Q ss_pred eEEEE--cCcccccCCCchhHHHHHHHHHhhcCCCCCeEEEEeccchHHH--HHHHhcCCCcEEEEEECCHHHHHHHHhh
Q 025141 70 KALVI--DGKLQSAEVDEFIYHESLVHPALLHHPNPKTIFIMGGGEGSTA--REILRHKTVEKVVMCDIDEEVVEFCKSY 145 (257)
Q Consensus 70 ~~L~l--dG~~~~~~~~~~~y~e~l~~~~l~~~~~~~~VL~IG~G~G~~~--~~l~~~~~~~~v~~VEid~~vi~~a~~~ 145 (257)
+++.. ||.+.-.+-|-.-+.+.+.. ....+..+++|+||+|+.+-+ ..+++ .+..+|+++.-+++=.+...+.
T Consensus 92 NTi~~~~dG~l~G~NTD~~Gf~~~L~~--~g~~~~~~~~lilGaGGaarai~~aL~~-~g~~~i~i~nRt~~ra~~la~~ 168 (269)
T 3tum_A 92 NVIRRERDGRLLGDNVDGAGFLGAAHK--HGFEPAGKRALVIGCGGVGSAIAYALAE-AGIASITLCDPSTARMGAVCEL 168 (269)
T ss_dssp SEEEECTTSCEEEECCHHHHHHHHHHH--TTCCCTTCEEEEECCSHHHHHHHHHHHH-TTCSEEEEECSCHHHHHHHHHH
T ss_pred eEEEECCCCEEEEEEcChHHHHHHHHH--hCCCcccCeEEEEecHHHHHHHHHHHHH-hCCCeEEEeCCCHHHHHHHHHH
Confidence 34544 45554444443333333332 123456789999999876633 33334 4567999999887655443333
Q ss_pred hhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEEEcCCC
Q 025141 146 LVVNKEAFSDPRLELVINDARAELESRKESYDVIIGDLAD 185 (257)
Q Consensus 146 ~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~D~~~ 185 (257)
+.... +...+.. + ....+.||+|+...+-
T Consensus 169 ~~~~~-----~~~~~~~-~-----~~~~~~~dliiNaTp~ 197 (269)
T 3tum_A 169 LGNGF-----PGLTVST-Q-----FSGLEDFDLVANASPV 197 (269)
T ss_dssp HHHHC-----TTCEEES-C-----CSCSTTCSEEEECSST
T ss_pred HhccC-----Ccceehh-h-----hhhhhcccccccCCcc
Confidence 33211 1122111 1 1123579999887653
No 414
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=89.13 E-value=2.6 Score=36.02 Aligned_cols=102 Identities=17% Similarity=0.264 Sum_probs=61.2
Q ss_pred CCeEEEEeccchH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhh-----c-cCCCCC------------CCeEEEE
Q 025141 103 PKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVV-----N-KEAFSD------------PRLELVI 162 (257)
Q Consensus 103 ~~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~-----~-~~~~~~------------~rv~i~~ 162 (257)
-++|.+||+|.=+ ++..+++. + .+|+++|.+++.++.+++.... . ...... .++++ .
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~-G-~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~-~ 91 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAAT-G-HTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIAT-S 91 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-CEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEE-E
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEE-e
Confidence 3689999998633 45556554 3 4899999999998876553210 0 000100 13333 2
Q ss_pred cchHHHHhcCCCceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 163 NDARAELESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 163 ~Da~~~l~~~~~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
.|..+-+ ...|+||...+... -...++++. +.+.++|+.+++.+.
T Consensus 92 ~~~~~~~----~~aD~Vi~avp~~~-------~~~~~v~~~-l~~~~~~~~iv~s~t 136 (302)
T 1f0y_A 92 TDAASVV----HSTDLVVEAIVENL-------KVKNELFKR-LDKFAAEHTIFASNT 136 (302)
T ss_dssp SCHHHHT----TSCSEEEECCCSCH-------HHHHHHHHH-HTTTSCTTCEEEECC
T ss_pred cCHHHhh----cCCCEEEEcCcCcH-------HHHHHHHHH-HHhhCCCCeEEEECC
Confidence 3433233 45799998875321 113467777 688888888777654
No 415
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=89.13 E-value=0.98 Score=39.63 Aligned_cols=46 Identities=20% Similarity=0.214 Sum_probs=39.8
Q ss_pred CCCCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCH---HHHHHHHhhhh
Q 025141 100 HPNPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDE---EVVEFCKSYLV 147 (257)
Q Consensus 100 ~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~---~vi~~a~~~~~ 147 (257)
..+...|||--||+|+++.++.+.. .+.+++|+++ ..++++++.+.
T Consensus 240 ~~~~~~vlDpF~GsGtt~~aa~~~~--r~~ig~e~~~~~~~~~~~~~~Rl~ 288 (319)
T 1eg2_A 240 SHPGSTVLDFFAGSGVTARVAIQEG--RNSICTDAAPVFKEYYQKQLTFLQ 288 (319)
T ss_dssp SCTTCEEEETTCTTCHHHHHHHHHT--CEEEEEESSTHHHHHHHHHHHHC-
T ss_pred CCCCCEEEecCCCCCHHHHHHHHcC--CcEEEEECCccHHHHHHHHHHHHH
Confidence 3566789999999999999999873 6899999999 99999998875
No 416
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=89.05 E-value=0.87 Score=38.58 Aligned_cols=77 Identities=12% Similarity=0.164 Sum_probs=51.0
Q ss_pred CCCeEEEEeccchH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH----------
Q 025141 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE---------- 168 (257)
Q Consensus 102 ~~~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~---------- 168 (257)
+.+.||+.|+++|. +++.+++. + .+|.+++.++.-.+.+.+.+... ...++.++..|..+.
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~-G-~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dl~~~~~~v~~~~~~ 84 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSN-G-IMVVLTCRDVTKGHEAVEKLKNS----NHENVVFHQLDVTDPIATMSSLADF 84 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHTT----TCCSEEEEECCTTSCHHHHHHHHHH
T ss_pred CCcEEEEecCCchHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHHHhc----CCCceEEEEccCCCcHHHHHHHHHH
Confidence 56789999987653 45555554 4 58999999988776655544322 235788888887543
Q ss_pred HhcCCCceeEEEEcCC
Q 025141 169 LESRKESYDVIIGDLA 184 (257)
Q Consensus 169 l~~~~~~fDvIi~D~~ 184 (257)
+....++.|++|.++.
T Consensus 85 ~~~~~g~iD~lv~nAg 100 (311)
T 3o26_A 85 IKTHFGKLDILVNNAG 100 (311)
T ss_dssp HHHHHSSCCEEEECCC
T ss_pred HHHhCCCCCEEEECCc
Confidence 1112257999999875
No 417
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=89.00 E-value=0.62 Score=40.91 Aligned_cols=95 Identities=15% Similarity=0.133 Sum_probs=54.3
Q ss_pred CCCCeEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-CCCcee
Q 025141 101 PNPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYD 177 (257)
Q Consensus 101 ~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~-~~~~fD 177 (257)
.+.++||++|+ +.|.++.++++..+..+|++++ +++-.+.++ +.. +.-+. ...|..+.+++ .++.+|
T Consensus 141 ~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~--~ga------~~~~~-~~~~~~~~~~~~~~~g~D 210 (349)
T 4a27_A 141 REGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK--DSV------THLFD-RNADYVQEVKRISAEGVD 210 (349)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG--GGS------SEEEE-TTSCHHHHHHHHCTTCEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH--cCC------cEEEc-CCccHHHHHHHhcCCCce
Confidence 34689999997 3466777777765456888887 444445554 221 11111 22344444433 346799
Q ss_pred EEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 178 vIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
+|+-.... + . ++. +.+.|+++|.++.-.
T Consensus 211 vv~d~~g~-----~-------~-~~~-~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 211 IVLDCLCG-----D-------N-TGK-GLSLLKPLGTYILYG 238 (349)
T ss_dssp EEEEECC---------------------CTTEEEEEEEEEEC
T ss_pred EEEECCCc-----h-------h-HHH-HHHHhhcCCEEEEEC
Confidence 99854421 1 1 134 578999999998643
No 418
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=88.96 E-value=6.9 Score=33.14 Aligned_cols=76 Identities=20% Similarity=0.364 Sum_probs=47.6
Q ss_pred CCCeEEEEeccchH---HHHHHHhcCCCcEEEEEECCHH-HHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hhc
Q 025141 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEE-VVEFCKSYLVVNKEAFSDPRLELVINDARAE------LES 171 (257)
Q Consensus 102 ~~~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid~~-vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~------l~~ 171 (257)
+.+.||+.|+++|. +++.+++. + .+|.+++.+++ ..+...+.... ...++.++..|..+. ++.
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~-G-~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~d~~~v~~~~~~ 118 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKE-G-ANIAIAYLDEEGDANETKQYVEK-----EGVKCVLLPGDLSDEQHCKDIVQE 118 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-T-CEEEEEESSCHHHHHHHHHHHHT-----TTCCEEEEESCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-C-CEEEEEeCCchHHHHHHHHHHHh-----cCCcEEEEECCCCCHHHHHHHHHH
Confidence 45789999987654 44555553 3 58999998865 33333333322 135788888887442 211
Q ss_pred ---CCCceeEEEEcCC
Q 025141 172 ---RKESYDVIIGDLA 184 (257)
Q Consensus 172 ---~~~~fDvIi~D~~ 184 (257)
.-++.|+++.++.
T Consensus 119 ~~~~~g~iD~lvnnAg 134 (291)
T 3ijr_A 119 TVRQLGSLNILVNNVA 134 (291)
T ss_dssp HHHHHSSCCEEEECCC
T ss_pred HHHHcCCCCEEEECCC
Confidence 2257899999875
No 419
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=88.90 E-value=7.1 Score=35.77 Aligned_cols=108 Identities=16% Similarity=0.171 Sum_probs=58.4
Q ss_pred CeEEEEeccchH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhhh-hhccCCC-------CCCCeEEEEcchHHHHhcCC
Q 025141 104 KTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYL-VVNKEAF-------SDPRLELVINDARAELESRK 173 (257)
Q Consensus 104 ~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~-~~~~~~~-------~~~rv~i~~~Da~~~l~~~~ 173 (257)
.+|.+||+|.=+ ++..+++.....+|+++|++++.++..++.- +.....+ ...++++ ..|..+.+
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~-t~~~~e~~---- 80 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFF-STNIDDAI---- 80 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE-ESCHHHHH----
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEE-ECCHHHHH----
Confidence 589999998543 4555555421248999999999887765421 0000000 0012332 23433333
Q ss_pred CceeEEEEcCCCCCCCCc-----ccCC-chHHHHHHHHcCcCCCCcEEEE
Q 025141 174 ESYDVIIGDLADPIEGGP-----CYKL-YTKSFYEFVVKPRLNPEGIFVT 217 (257)
Q Consensus 174 ~~fDvIi~D~~~~~~~~p-----~~~L-~t~ef~~~~~~~~L~pgGil~~ 217 (257)
...|+|++-.+.|..... ...| +..+..+. +.+.|+++.+++.
T Consensus 81 ~~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~-i~~~l~~g~iVV~ 129 (467)
T 2q3e_A 81 KEADLVFISVNTPTKTYGMGKGRAADLKYIEACARR-IVQNSNGYKIVTE 129 (467)
T ss_dssp HHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHH-HHHTCCSEEEEEE
T ss_pred hcCCEEEEEcCCchhhccccccCCCcHHHHHHHHHH-HHhhCCCCCEEEE
Confidence 247999998875432100 0011 12456666 5778888776653
No 420
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=88.71 E-value=0.46 Score=41.25 Aligned_cols=91 Identities=13% Similarity=0.157 Sum_probs=53.5
Q ss_pred eEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-CCCceeEEEE
Q 025141 105 TIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYDVIIG 181 (257)
Q Consensus 105 ~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~-~~~~fDvIi~ 181 (257)
+||++|+ |.|..+.++++..+ .+|++++.+++-.+.+++. ... .-+.....| .+.++. ....+|+|+-
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~~~~~~~~~~~l-Ga~------~~i~~~~~~-~~~~~~~~~~~~d~vid 222 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRG-YTVEASTGKAAEHDYLRVL-GAK------EVLAREDVM-AERIRPLDKQRWAAAVD 222 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT-CCEEEEESCTTCHHHHHHT-TCS------EEEECC----------CCSCCEEEEEE
T ss_pred eEEEecCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHc-CCc------EEEecCCcH-HHHHHHhcCCcccEEEE
Confidence 7999996 55667778888766 4799999998888888763 211 000100111 112222 2357999875
Q ss_pred cCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 182 D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
.... + .++. +.+.|+++|.++.-
T Consensus 223 ~~g~-----~--------~~~~-~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 223 PVGG-----R--------TLAT-VLSRMRYGGAVAVS 245 (328)
T ss_dssp CSTT-----T--------THHH-HHHTEEEEEEEEEC
T ss_pred CCcH-----H--------HHHH-HHHhhccCCEEEEE
Confidence 4321 1 1344 46789999998864
No 421
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=88.68 E-value=1.5 Score=38.00 Aligned_cols=97 Identities=14% Similarity=0.275 Sum_probs=59.8
Q ss_pred CCCCeEEEEeccc--hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeE
Q 025141 101 PNPKTIFIMGGGE--GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDV 178 (257)
Q Consensus 101 ~~~~~VL~IG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDv 178 (257)
..-++|-+||+|. ++++..++ . + -+|+++|.+++.++.+++.+ ... .-.+++.. .|..+ + ..-|+
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~la-a-G-~~V~v~d~~~~~~~~~~~~l--~~~--~~~~i~~~-~~~~~-~----~~aDl 76 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAIA-S-K-HEVVLQDVSEKALEAAREQI--PEE--LLSKIEFT-TTLEK-V----KDCDI 76 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHHH-T-T-SEEEEECSCHHHHHHHHHHS--CGG--GGGGEEEE-SSCTT-G----GGCSE
T ss_pred cCCCeEEEEeeCHHHHHHHHHHH-c-C-CEEEEEECCHHHHHHHHHHH--HHH--HhCCeEEe-CCHHH-H----cCCCE
Confidence 4568999999994 44666666 4 4 48999999999999888762 100 00134422 33222 2 35799
Q ss_pred EEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecC
Q 025141 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (257)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~ 220 (257)
||...++.. -....+|.. +... |+.+++.|++
T Consensus 77 Vieavpe~~-------~vk~~l~~~-l~~~--~~~IlasntS 108 (293)
T 1zej_A 77 VMEAVFEDL-------NTKVEVLRE-VERL--TNAPLCSNTS 108 (293)
T ss_dssp EEECCCSCH-------HHHHHHHHH-HHTT--CCSCEEECCS
T ss_pred EEEcCcCCH-------HHHHHHHHH-HhcC--CCCEEEEECC
Confidence 998876421 113456666 5554 8888877764
No 422
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=88.66 E-value=5.5 Score=36.61 Aligned_cols=73 Identities=21% Similarity=0.208 Sum_probs=50.9
Q ss_pred CCCCeEEEEeccchHH-HHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHH--HHhcCC-Cce
Q 025141 101 PNPKTIFIMGGGEGST-AREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA--ELESRK-ESY 176 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~-~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~--~l~~~~-~~f 176 (257)
...++|+++|+|.-+. +...+.. ..+|..+|.|++-.+...+.+ ++..++++|+.+ .|.+.+ +..
T Consensus 233 ~~~~~v~I~GgG~ig~~lA~~L~~--~~~v~iIE~d~~r~~~la~~l---------~~~~Vi~GD~td~~~L~ee~i~~~ 301 (461)
T 4g65_A 233 KPYRRIMIVGGGNIGASLAKRLEQ--TYSVKLIERNLQRAEKLSEEL---------ENTIVFCGDAADQELLTEENIDQV 301 (461)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHTT--TSEEEEEESCHHHHHHHHHHC---------TTSEEEESCTTCHHHHHHTTGGGC
T ss_pred ccccEEEEEcchHHHHHHHHHhhh--cCceEEEecCHHHHHHHHHHC---------CCceEEeccccchhhHhhcCchhh
Confidence 3468999999876442 2222332 358999999999887666543 467899999966 555544 789
Q ss_pred eEEEEcCC
Q 025141 177 DVIIGDLA 184 (257)
Q Consensus 177 DvIi~D~~ 184 (257)
|+++.-..
T Consensus 302 D~~ia~T~ 309 (461)
T 4g65_A 302 DVFIALTN 309 (461)
T ss_dssp SEEEECCS
T ss_pred cEEEEccc
Confidence 99987544
No 423
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=88.43 E-value=3.8 Score=30.74 Aligned_cols=67 Identities=25% Similarity=0.307 Sum_probs=40.8
Q ss_pred CCCeEEEEeccchHHHHHHHh---cCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEE-EEcchHHHHhcCCCcee
Q 025141 102 NPKTIFIMGGGEGSTAREILR---HKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLEL-VINDARAELESRKESYD 177 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~---~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i-~~~Da~~~l~~~~~~fD 177 (257)
..++|++||+| .+++.+++ ..+. +|++++.+++-.+...+.+. ..+ ...|..+.++ ..|
T Consensus 20 ~~~~v~iiG~G--~iG~~~a~~l~~~g~-~v~v~~r~~~~~~~~a~~~~----------~~~~~~~~~~~~~~----~~D 82 (144)
T 3oj0_A 20 GGNKILLVGNG--MLASEIAPYFSYPQY-KVTVAGRNIDHVRAFAEKYE----------YEYVLINDIDSLIK----NND 82 (144)
T ss_dssp CCCEEEEECCS--HHHHHHGGGCCTTTC-EEEEEESCHHHHHHHHHHHT----------CEEEECSCHHHHHH----TCS
T ss_pred cCCEEEEECCC--HHHHHHHHHHHhCCC-EEEEEcCCHHHHHHHHHHhC----------CceEeecCHHHHhc----CCC
Confidence 37899999985 44444443 2344 59999999887655333222 121 2345445443 489
Q ss_pred EEEEcCCC
Q 025141 178 VIIGDLAD 185 (257)
Q Consensus 178 vIi~D~~~ 185 (257)
+|+.-.+.
T Consensus 83 ivi~at~~ 90 (144)
T 3oj0_A 83 VIITATSS 90 (144)
T ss_dssp EEEECSCC
T ss_pred EEEEeCCC
Confidence 99987654
No 424
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=88.38 E-value=1.8 Score=35.97 Aligned_cols=90 Identities=14% Similarity=0.211 Sum_probs=53.5
Q ss_pred CeEEEEeccchH--HHHHHHhcC--CCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025141 104 KTIFIMGGGEGS--TAREILRHK--TVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (257)
Q Consensus 104 ~~VL~IG~G~G~--~~~~l~~~~--~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvI 179 (257)
++|.+||+|.=+ +++.+++.. +..+|+++|.+++-.+..++.+.. + ...|..+.++ ..|+|
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~----------~-~~~~~~e~~~----~aDvV 67 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGL----------T-TTTDNNEVAK----NADIL 67 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCC----------E-ECSCHHHHHH----HCSEE
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCC----------E-EeCChHHHHH----hCCEE
Confidence 479999998433 455555531 124799999999987776543321 1 2234444443 47999
Q ss_pred EEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
++-.+. . ...+.++. +...|+|+.+++..
T Consensus 68 ilav~~-~--------~~~~v~~~-l~~~l~~~~~vvs~ 96 (247)
T 3gt0_A 68 ILSIKP-D--------LYASIINE-IKEIIKNDAIIVTI 96 (247)
T ss_dssp EECSCT-T--------THHHHC----CCSSCTTCEEEEC
T ss_pred EEEeCH-H--------HHHHHHHH-HHhhcCCCCEEEEe
Confidence 987632 1 13455666 67778887776643
No 425
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=88.34 E-value=0.64 Score=40.42 Aligned_cols=34 Identities=26% Similarity=0.435 Sum_probs=25.0
Q ss_pred CCCeEEEEeccc-hHHH-HHHHhcCCCcEEEEEECCH
Q 025141 102 NPKTIFIMGGGE-GSTA-REILRHKTVEKVVMCDIDE 136 (257)
Q Consensus 102 ~~~~VL~IG~G~-G~~~-~~l~~~~~~~~v~~VEid~ 136 (257)
..++||++|+|+ |+.. ..|++ .++.+++.+|-|.
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~-aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTR-CGIGKLLLFDYDK 70 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHH-HTCSEEEEECCCB
T ss_pred hCCeEEEECcCHHHHHHHHHHHH-cCCCEEEEECCCc
Confidence 457999999985 4433 44444 5788999999886
No 426
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=88.33 E-value=4.2 Score=33.21 Aligned_cols=77 Identities=16% Similarity=0.223 Sum_probs=49.1
Q ss_pred CCCeEEEEeccchH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcch--------HHHHh
Q 025141 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDA--------RAELE 170 (257)
Q Consensus 102 ~~~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da--------~~~l~ 170 (257)
+.+.||+.|+++|. +++.+++. + .+|.+++.+++-.+...+.+... ..+++.++..|. .+.++
T Consensus 13 ~~k~vlITGas~gIG~~ia~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~d~d~~~~~~~~~~~~ 86 (247)
T 3i1j_A 13 KGRVILVTGAARGIGAAAARAYAAH-G-ASVVLLGRTEASLAEVSDQIKSA----GQPQPLIIALNLENATAQQYRELAA 86 (247)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHT----TSCCCEEEECCTTTCCHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-C-CEEEEEecCHHHHHHHHHHHHhc----CCCCceEEEeccccCCHHHHHHHHH
Confidence 46789998887553 34555554 3 58999999998877766655432 124566666554 12222
Q ss_pred ---cCCCceeEEEEcCC
Q 025141 171 ---SRKESYDVIIGDLA 184 (257)
Q Consensus 171 ---~~~~~fDvIi~D~~ 184 (257)
..-++.|+++..+.
T Consensus 87 ~~~~~~g~id~lv~nAg 103 (247)
T 3i1j_A 87 RVEHEFGRLDGLLHNAS 103 (247)
T ss_dssp HHHHHHSCCSEEEECCC
T ss_pred HHHHhCCCCCEEEECCc
Confidence 12257899999875
No 427
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=88.28 E-value=0.63 Score=40.24 Aligned_cols=89 Identities=22% Similarity=0.243 Sum_probs=57.0
Q ss_pred eEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhc-CCCceeEEEE
Q 025141 105 TIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELES-RKESYDVIIG 181 (257)
Q Consensus 105 ~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~-~~~~fDvIi~ 181 (257)
+||++|+ |.|..+.++++..+. +|++++.+++-.+.+++. +. + ..+-..|. ..++. ..+.+|+|+-
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~l-Ga------~--~vi~~~~~-~~~~~~~~~~~d~v~d 217 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSL-GA------N--RILSRDEF-AESRPLEKQLWAGAID 217 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHH-TC------S--EEEEGGGS-SCCCSSCCCCEEEEEE
T ss_pred eEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc-CC------C--EEEecCCH-HHHHhhcCCCccEEEE
Confidence 4999996 567788888887765 899999999988888873 21 1 01111111 11222 2357998764
Q ss_pred cCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 182 D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
.. + .+.++. +.+.|+++|.++.-
T Consensus 218 -~~-----g-------~~~~~~-~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 218 -TV-----G-------DKVLAK-VLAQMNYGGCVAAC 240 (324)
T ss_dssp -SS-----C-------HHHHHH-HHHTEEEEEEEEEC
T ss_pred -CC-----C-------cHHHHH-HHHHHhcCCEEEEE
Confidence 32 1 124566 57799999998864
No 428
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=88.24 E-value=2.2 Score=35.51 Aligned_cols=76 Identities=18% Similarity=0.201 Sum_probs=52.0
Q ss_pred CCCCeEEEEeccchH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH---------
Q 025141 101 PNPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE--------- 168 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~--------- 168 (257)
.+.+.||+.|+++|. +++.+++. + .+|.+++.+++-.+...+.+... ..++.++..|..+.
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~ 77 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAE-G-FTVFAGRRNGEKLAPLVAEIEAA-----GGRIVARSLDARNEDEVTAFLNA 77 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHT-T-CEEEEEESSGGGGHHHHHHHHHT-----TCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHHHhc-----CCeEEEEECcCCCHHHHHHHHHH
Confidence 356789999988664 45555554 4 58999999988776666554322 35788888886432
Q ss_pred HhcCCCceeEEEEcCC
Q 025141 169 LESRKESYDVIIGDLA 184 (257)
Q Consensus 169 l~~~~~~fDvIi~D~~ 184 (257)
+.+. ++.|+++.++.
T Consensus 78 ~~~~-g~id~lv~nAg 92 (252)
T 3h7a_A 78 ADAH-APLEVTIFNVG 92 (252)
T ss_dssp HHHH-SCEEEEEECCC
T ss_pred HHhh-CCceEEEECCC
Confidence 2223 68999999875
No 429
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=88.19 E-value=2.3 Score=37.14 Aligned_cols=76 Identities=30% Similarity=0.406 Sum_probs=49.0
Q ss_pred CCCeEEEEeccchHHH----HHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH--HhcCCCc
Q 025141 102 NPKTIFIMGGGEGSTA----REILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE--LESRKES 175 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~----~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~--l~~~~~~ 175 (257)
+.++||+.|+. |.+. +++++.++..+|++++.++.-.+..++.+. .++++++.+|.++. +...-+.
T Consensus 20 ~~k~vlVTGat-G~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~-------~~~v~~~~~Dl~d~~~l~~~~~~ 91 (344)
T 2gn4_A 20 DNQTILITGGT-GSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN-------DPRMRFFIGDVRDLERLNYALEG 91 (344)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC-------CTTEEEEECCTTCHHHHHHHTTT
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc-------CCCEEEEECCCCCHHHHHHHHhc
Confidence 46789999875 4444 444443243489999999876554443321 35889999998653 2222346
Q ss_pred eeEEEEcCCC
Q 025141 176 YDVIIGDLAD 185 (257)
Q Consensus 176 fDvIi~D~~~ 185 (257)
.|+||..+..
T Consensus 92 ~D~Vih~Aa~ 101 (344)
T 2gn4_A 92 VDICIHAAAL 101 (344)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999998753
No 430
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=88.07 E-value=5.7 Score=32.73 Aligned_cols=77 Identities=17% Similarity=0.196 Sum_probs=49.6
Q ss_pred CCCeEEEEeccchH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcch--H------HHHh
Q 025141 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDA--R------AELE 170 (257)
Q Consensus 102 ~~~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da--~------~~l~ 170 (257)
+.|.||+.|+++|. +++.+++. + .+|.+++.+++-.+...+.+.... ..++.++..|. . +.++
T Consensus 11 ~~k~vlVTGas~gIG~aia~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~ 84 (252)
T 3f1l_A 11 NDRIILVTGASDGIGREAAMTYARY-G-ATVILLGRNEEKLRQVASHINEET----GRQPQWFILDLLTCTSENCQQLAQ 84 (252)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHHH----SCCCEEEECCTTTCCHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHHHhhc----CCCceEEEEecccCCHHHHHHHHH
Confidence 46789999987653 45555554 4 589999999887776655543221 23667777776 1 1221
Q ss_pred ---cCCCceeEEEEcCC
Q 025141 171 ---SRKESYDVIIGDLA 184 (257)
Q Consensus 171 ---~~~~~fDvIi~D~~ 184 (257)
...++.|+++.++.
T Consensus 85 ~~~~~~g~id~lv~nAg 101 (252)
T 3f1l_A 85 RIAVNYPRLDGVLHNAG 101 (252)
T ss_dssp HHHHHCSCCSEEEECCC
T ss_pred HHHHhCCCCCEEEECCc
Confidence 22357999999875
No 431
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=87.88 E-value=7.5 Score=34.08 Aligned_cols=112 Identities=15% Similarity=0.198 Sum_probs=56.9
Q ss_pred cCCCCCeEEEEeccchH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCce
Q 025141 99 HHPNPKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESY 176 (257)
Q Consensus 99 ~~~~~~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~f 176 (257)
+...+.+|.+||+|.=+ ++..++...-..++..+|++++.++--..-+.... .+. +++++..+|... -...
T Consensus 5 ~~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~-~~~-~~~~i~~~~~~a-----~~~a 77 (326)
T 3vku_A 5 TDKDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDAL-PFT-SPKKIYSAEYSD-----AKDA 77 (326)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTG-GGS-CCCEEEECCGGG-----GTTC
T ss_pred ccCCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhh-hhc-CCcEEEECcHHH-----hcCC
Confidence 34567899999986422 23333443333589999999886653322221100 011 356666665322 2457
Q ss_pred eEEEEcCCCCCCCCc-ccCCc--h----HHHHHHHHcCcCCCCcEEEEec
Q 025141 177 DVIIGDLADPIEGGP-CYKLY--T----KSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 177 DvIi~D~~~~~~~~p-~~~L~--t----~ef~~~~~~~~L~pgGil~~~~ 219 (257)
|+|++-+..|...+. ...|+ + ++..+. +.+ ..|++++++-+
T Consensus 78 DiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~-i~~-~~p~a~ilvvt 125 (326)
T 3vku_A 78 DLVVITAGAPQKPGETRLDLVNKNLKILKSIVDP-IVD-SGFNGIFLVAA 125 (326)
T ss_dssp SEEEECCCCC----------------CHHHHHHH-HHT-TTCCSEEEECS
T ss_pred CEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHH-HHh-cCCceEEEEcc
Confidence 999987653321111 11233 1 345555 343 57999877644
No 432
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=87.79 E-value=13 Score=32.20 Aligned_cols=109 Identities=14% Similarity=0.271 Sum_probs=55.9
Q ss_pred CCCeEEEEeccchHHH--HHHHhcCCCcEEEEEECCHHHHHH-HHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeE
Q 025141 102 NPKTIFIMGGGEGSTA--REILRHKTVEKVVMCDIDEEVVEF-CKSYLVVNKEAFSDPRLELVINDARAELESRKESYDV 178 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~--~~l~~~~~~~~v~~VEid~~vi~~-a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDv 178 (257)
.+.+|.+||+|.-+.+ ..++...-..++..+|++++.++. +...-... .+...++++..+| .+-+ ..-|+
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~--~~~~~~~~v~~~~-~~a~----~~aDv 77 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHAT--PYSPTTVRVKAGE-YSDC----HDADL 77 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHG--GGSSSCCEEEECC-GGGG----TTCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhh--hhcCCCeEEEeCC-HHHh----CCCCE
Confidence 3568999999765543 233333323589999999865543 22211111 0112345555544 2222 45799
Q ss_pred EEEcCCCCCCCCcc-cC--CchHHHHHHH---HcCcCCCCcEEEEe
Q 025141 179 IIGDLADPIEGGPC-YK--LYTKSFYEFV---VKPRLNPEGIFVTQ 218 (257)
Q Consensus 179 Ii~D~~~~~~~~p~-~~--L~t~ef~~~~---~~~~L~pgGil~~~ 218 (257)
|++-...|...+.. .. ..+...++.+ +.+. +|++++++-
T Consensus 78 Vvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~ 122 (317)
T 3d0o_A 78 VVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMAS-KFDGIFLVA 122 (317)
T ss_dssp EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEEC
T ss_pred EEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEe
Confidence 99987644321110 01 1122333331 2333 899998873
No 433
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=87.67 E-value=0.97 Score=40.18 Aligned_cols=34 Identities=21% Similarity=0.481 Sum_probs=24.9
Q ss_pred CCCeEEEEeccc-hHH-HHHHHhcCCCcEEEEEECCH
Q 025141 102 NPKTIFIMGGGE-GST-AREILRHKTVEKVVMCDIDE 136 (257)
Q Consensus 102 ~~~~VL~IG~G~-G~~-~~~l~~~~~~~~v~~VEid~ 136 (257)
+.++||++|+|+ |+. +..+++ .++.+++.||-|.
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~-aGVg~ItlvD~D~ 68 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIA-WGVRKITFVDNGT 68 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHH-TTCCEEEEECCCB
T ss_pred hCCEEEEECCCHHHHHHHHHHHH-cCCCEEEEecCCE
Confidence 368999999984 333 344444 6889999999875
No 434
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=87.56 E-value=1.9 Score=37.24 Aligned_cols=91 Identities=18% Similarity=0.211 Sum_probs=54.4
Q ss_pred CCCCeEEEEe--ccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHH-HHhcCCCcee
Q 025141 101 PNPKTIFIMG--GGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA-ELESRKESYD 177 (257)
Q Consensus 101 ~~~~~VL~IG--~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~-~l~~~~~~fD 177 (257)
.+.++||++| +|-|.++.++++..+. +|+++..+++ .+.+++. .. + .++..+-.+ +.+ .-..+|
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~~~~~-~~~~~~l-Ga------~---~~i~~~~~~~~~~-~~~g~D 217 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTASKRN-HAFLKAL-GA------E---QCINYHEEDFLLA-ISTPVD 217 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEECHHH-HHHHHHH-TC------S---EEEETTTSCHHHH-CCSCEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeccch-HHHHHHc-CC------C---EEEeCCCcchhhh-hccCCC
Confidence 4568999997 4557778888887764 8888875444 6777763 11 1 111111111 222 225799
Q ss_pred EEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 178 VIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 178 vIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
+|+-... . ..+ .. +.+.|+++|.++.-
T Consensus 218 ~v~d~~g-----~-------~~~-~~-~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 218 AVIDLVG-----G-------DVG-IQ-SIDCLKETGCIVSV 244 (321)
T ss_dssp EEEESSC-----H-------HHH-HH-HGGGEEEEEEEEEC
T ss_pred EEEECCC-----c-------HHH-HH-HHHhccCCCEEEEe
Confidence 9885321 1 122 55 57899999998864
No 435
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=87.55 E-value=2.1 Score=36.48 Aligned_cols=103 Identities=16% Similarity=0.216 Sum_probs=62.2
Q ss_pred CCeEEEEeccchH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhc------cC-CCCC-------CCeEEEEcchH
Q 025141 103 PKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVN------KE-AFSD-------PRLELVINDAR 166 (257)
Q Consensus 103 ~~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~------~~-~~~~-------~rv~i~~~Da~ 166 (257)
-++|.+||+|.=+ ++..+++. + .+|+++|.+++.++.+++.+... .. .... .+++. ..|..
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~-G-~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~ 80 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFH-G-FAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLA 80 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-T-CEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-C-CeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHH
Confidence 3689999998532 44555553 4 48999999999988877653110 00 0000 12222 34433
Q ss_pred HHHhcCCCceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecC
Q 025141 167 AELESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (257)
Q Consensus 167 ~~l~~~~~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~ 220 (257)
+.+ ...|+||...+... -...++++. +.+.++|+.+++.+..
T Consensus 81 ~~~----~~aDlVi~av~~~~-------~~~~~v~~~-l~~~~~~~~il~s~tS 122 (283)
T 4e12_A 81 QAV----KDADLVIEAVPESL-------DLKRDIYTK-LGELAPAKTIFATNSS 122 (283)
T ss_dssp HHT----TTCSEEEECCCSCH-------HHHHHHHHH-HHHHSCTTCEEEECCS
T ss_pred HHh----ccCCEEEEeccCcH-------HHHHHHHHH-HHhhCCCCcEEEECCC
Confidence 333 45799998875321 123567777 6888999888876653
No 436
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=87.46 E-value=0.097 Score=58.05 Aligned_cols=99 Identities=13% Similarity=0.085 Sum_probs=0.0
Q ss_pred eEEEEeccchHHHHHHHhcCC-----CcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025141 105 TIFIMGGGEGSTAREILRHKT-----VEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (257)
Q Consensus 105 ~VL~IG~G~G~~~~~l~~~~~-----~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvI 179 (257)
+||+||.|+|..+..+++.-. ..+.|..|+++...+.+++.|... .++.-.-|..+.-......||+|
T Consensus 1243 ~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~-------di~~~~~d~~~~~~~~~~~ydlv 1315 (2512)
T 2vz8_A 1243 KVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL-------HVTQGQWDPANPAPGSLGKADLL 1315 (2512)
T ss_dssp EEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH-------TEEEECCCSSCCCC-----CCEE
T ss_pred eEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc-------ccccccccccccccCCCCceeEE
Q ss_pred EEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEE
Q 025141 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~ 217 (257)
+....-+..... .+.+.. +++.|+|||.+++
T Consensus 1316 ia~~vl~~t~~~------~~~l~~-~~~lL~p~G~l~~ 1346 (2512)
T 2vz8_A 1316 VCNCALATLGDP------AVAVGN-MAATLKEGGFLLL 1346 (2512)
T ss_dssp EEECC---------------------------CCEEEE
T ss_pred EEcccccccccH------HHHHHH-HHHhcCCCcEEEE
No 437
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=87.33 E-value=0.67 Score=41.18 Aligned_cols=52 Identities=15% Similarity=0.176 Sum_probs=31.0
Q ss_pred chhHHHHHHHHHhh--cCCCCCeEEEEeccc-hHHHHHHHhcCCCcEEEEEECCH
Q 025141 85 EFIYHESLVHPALL--HHPNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDE 136 (257)
Q Consensus 85 ~~~y~e~l~~~~l~--~~~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~ 136 (257)
...|.+.+..+..- ......+||++|+|+ |+-....+...++.+++.+|-|.
T Consensus 16 ~~rY~Rq~~l~G~~~q~~L~~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~ 70 (346)
T 1y8q_A 16 AAQYDRQIRLWGLEAQKRLRASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQ 70 (346)
T ss_dssp HHHHHHHHHHHCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred HHHHHHHHHhhCHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 34677665432211 122467999999964 33333333345789999998763
No 438
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=87.32 E-value=3.5 Score=35.62 Aligned_cols=94 Identities=12% Similarity=0.115 Sum_probs=53.8
Q ss_pred CeEEEEeccchH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhh-hhhccCCCCCCCeEE----EEcchHHHHhcCCCce
Q 025141 104 KTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSY-LVVNKEAFSDPRLEL----VINDARAELESRKESY 176 (257)
Q Consensus 104 ~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~-~~~~~~~~~~~rv~i----~~~Da~~~l~~~~~~f 176 (257)
.+|++||+|.-+ ++..+.+. + .+|+.++.++ . +..++. +..... ..+..++ ...|. ....+.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-g-~~V~~~~r~~-~-~~i~~~Gl~~~~~--~~g~~~~~~~~~~~~~----~~~~~~~ 72 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT-G-HCVSVVSRSD-Y-ETVKAKGIRIRSA--TLGDYTFRPAAVVRSA----AELETKP 72 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT-T-CEEEEECSTT-H-HHHHHHCEEEEET--TTCCEEECCSCEESCG----GGCSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHhC-C-CeEEEEeCCh-H-HHHHhCCcEEeec--CCCcEEEeeeeeECCH----HHcCCCC
Confidence 589999998654 34444443 3 4899999987 3 444432 211110 1122332 11232 1222479
Q ss_pred eEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEE
Q 025141 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (257)
Q Consensus 177 DvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~ 217 (257)
|+|++-..... ..+.++. ++..|+++.+++.
T Consensus 73 DlVilavK~~~---------~~~~l~~-l~~~l~~~t~Iv~ 103 (320)
T 3i83_A 73 DCTLLCIKVVE---------GADRVGL-LRDAVAPDTGIVL 103 (320)
T ss_dssp SEEEECCCCCT---------TCCHHHH-HTTSCCTTCEEEE
T ss_pred CEEEEecCCCC---------hHHHHHH-HHhhcCCCCEEEE
Confidence 99999865321 2356777 7889999886664
No 439
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=86.94 E-value=1 Score=43.10 Aligned_cols=33 Identities=21% Similarity=0.383 Sum_probs=24.2
Q ss_pred CCeEEEEeccc-hHHHHHHHhcCCCcEEEEEECC
Q 025141 103 PKTIFIMGGGE-GSTAREILRHKTVEKVVMCDID 135 (257)
Q Consensus 103 ~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid 135 (257)
.++||+||+|+ |+.....+...++.+++.||-|
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D 360 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 360 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 57999999985 4333333444678999999988
No 440
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=86.87 E-value=2.2 Score=36.11 Aligned_cols=90 Identities=23% Similarity=0.170 Sum_probs=54.7
Q ss_pred CCeEEEEeccchH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEE
Q 025141 103 PKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVII 180 (257)
Q Consensus 103 ~~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi 180 (257)
..+|.+||+|.=+ ++..+.+.....+|+++|.+++..+.+++. ... + ....|..+.+ ...|+|+
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~-g~~-----~----~~~~~~~~~~----~~aDvVi 71 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALER-GIV-----D----EATADFKVFA----ALADVII 71 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHT-TSC-----S----EEESCTTTTG----GGCSEEE
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHc-CCc-----c----cccCCHHHhh----cCCCEEE
Confidence 3589999998533 445555542125899999999888766542 110 0 1122322222 3579999
Q ss_pred EcCCCCCCCCcccCCchHHHHHHHHcCc-CCCCcEEE
Q 025141 181 GDLADPIEGGPCYKLYTKSFYEFVVKPR-LNPEGIFV 216 (257)
Q Consensus 181 ~D~~~~~~~~p~~~L~t~ef~~~~~~~~-L~pgGil~ 216 (257)
+-.+.. ...+.++. +... |+++.+++
T Consensus 72 lavp~~---------~~~~v~~~-l~~~~l~~~~ivi 98 (290)
T 3b1f_A 72 LAVPIK---------KTIDFIKI-LADLDLKEDVIIT 98 (290)
T ss_dssp ECSCHH---------HHHHHHHH-HHTSCCCTTCEEE
T ss_pred EcCCHH---------HHHHHHHH-HHhcCCCCCCEEE
Confidence 976521 12567777 6777 88877665
No 441
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=86.84 E-value=3.2 Score=35.86 Aligned_cols=78 Identities=22% Similarity=0.364 Sum_probs=52.2
Q ss_pred CCCeEEEEeccchH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hh--
Q 025141 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LE-- 170 (257)
Q Consensus 102 ~~~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~------l~-- 170 (257)
..+.||+.|+++|. +++.+++. + .+|.+++.+++-.+.+.+.+...+ ..+++.++..|..+. ++
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~-G-~~Vv~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~ 81 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQ-G-CKVAIADIRQDSIDKALATLEAEG---SGPEVMGVQLDVASREGFKMAADEV 81 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHHT---CGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHC-C-CEEEEEECCHHHHHHHHHHHHhcC---CCCeEEEEECCCCCHHHHHHHHHHH
Confidence 46789999987664 44555554 4 589999999988776666554321 234788888886432 21
Q ss_pred -cCCCceeEEEEcCC
Q 025141 171 -SRKESYDVIIGDLA 184 (257)
Q Consensus 171 -~~~~~fDvIi~D~~ 184 (257)
...++.|+++.++.
T Consensus 82 ~~~~g~id~lv~nAg 96 (319)
T 3ioy_A 82 EARFGPVSILCNNAG 96 (319)
T ss_dssp HHHTCCEEEEEECCC
T ss_pred HHhCCCCCEEEECCC
Confidence 22357899999885
No 442
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=86.74 E-value=8.8 Score=32.82 Aligned_cols=96 Identities=19% Similarity=0.234 Sum_probs=51.1
Q ss_pred cCcccccCCCchhHHHHHHHHHhhcCCCCCeEEEEeccchH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCC
Q 025141 75 DGKLQSAEVDEFIYHESLVHPALLHHPNPKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEA 152 (257)
Q Consensus 75 dG~~~~~~~~~~~y~e~l~~~~l~~~~~~~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~ 152 (257)
||.+...+.|-.-+.+.+.. .....+.++||++|+|+-+ ++..+++ .+..+|+++..+++-.+...+.+...
T Consensus 100 ~g~l~G~NTD~~G~~~~L~~--~~~~l~~k~vlvlGaGg~g~aia~~L~~-~G~~~v~v~~R~~~~a~~la~~~~~~--- 173 (281)
T 3o8q_A 100 DGEILGDNTDGEGLVQDLLA--QQVLLKGATILLIGAGGAARGVLKPLLD-QQPASITVTNRTFAKAEQLAELVAAY--- 173 (281)
T ss_dssp TSCEEEECCHHHHHHHHHHH--TTCCCTTCEEEEECCSHHHHHHHHHHHT-TCCSEEEEEESSHHHHHHHHHHHGGG---
T ss_pred CCcEEEEecHHHHHHHHHHH--hCCCccCCEEEEECchHHHHHHHHHHHh-cCCCeEEEEECCHHHHHHHHHHhhcc---
Confidence 45554444443333444422 1123467899999986322 2333343 45569999999987655444433311
Q ss_pred CCCCCeEEEEcchHHHHhcCCCceeEEEEcCCC
Q 025141 153 FSDPRLELVINDARAELESRKESYDVIIGDLAD 185 (257)
Q Consensus 153 ~~~~rv~i~~~Da~~~l~~~~~~fDvIi~D~~~ 185 (257)
..++...- ......+|+||.-.+.
T Consensus 174 ---~~~~~~~~------~~l~~~aDiIInaTp~ 197 (281)
T 3o8q_A 174 ---GEVKAQAF------EQLKQSYDVIINSTSA 197 (281)
T ss_dssp ---SCEEEEEG------GGCCSCEEEEEECSCC
T ss_pred ---CCeeEeeH------HHhcCCCCEEEEcCcC
Confidence 12333321 1112679999987654
No 443
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=86.50 E-value=1.5 Score=39.96 Aligned_cols=102 Identities=13% Similarity=0.138 Sum_probs=59.3
Q ss_pred CCCeEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEE----cch------HHHH
Q 025141 102 NPKTIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVI----NDA------RAEL 169 (257)
Q Consensus 102 ~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~----~Da------~~~l 169 (257)
..++||++|+ |.|.++.++++..+ .++++++.+++-.+.+++.-...--.+.++.+.+.. .|. .+.+
T Consensus 228 ~g~~VlV~GasG~vG~~avqlak~~G-a~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i 306 (456)
T 3krt_A 228 QGDNVLIWGASGGLGSYATQFALAGG-ANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRI 306 (456)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHH
Confidence 4578999996 45667788888766 588888899999998877411000000111111000 111 1223
Q ss_pred hc-C-CCceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 170 ES-R-KESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 170 ~~-~-~~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
++ . ...+|+|+-... .+.++. +.+.|+++|.++.-
T Consensus 307 ~~~t~g~g~Dvvid~~G-------------~~~~~~-~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 307 RELTGGEDIDIVFEHPG-------------RETFGA-SVFVTRKGGTITTC 343 (456)
T ss_dssp HHHHTSCCEEEEEECSC-------------HHHHHH-HHHHEEEEEEEEES
T ss_pred HHHhCCCCCcEEEEcCC-------------chhHHH-HHHHhhCCcEEEEE
Confidence 22 2 357999875321 134555 56789999998864
No 444
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=86.44 E-value=2.8 Score=31.89 Aligned_cols=98 Identities=10% Similarity=0.104 Sum_probs=55.1
Q ss_pred CCeEEEEeccchH--HHHHHHhcCCCcEEEEEECC-HHHHHHHHhhhhhccCCCCCCCeEEEEcchHH--HHhc-CCCce
Q 025141 103 PKTIFIMGGGEGS--TAREILRHKTVEKVVMCDID-EEVVEFCKSYLVVNKEAFSDPRLELVINDARA--ELES-RKESY 176 (257)
Q Consensus 103 ~~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid-~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~--~l~~-~~~~f 176 (257)
.++|+++|+|.=+ +++.+.+. + .+|+++|.+ ++-.+..++.++ ..+.++.+|+.+ .++. .-+..
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~-g-~~V~vid~~~~~~~~~~~~~~~--------~~~~~i~gd~~~~~~l~~a~i~~a 72 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQR-G-QNVTVISNLPEDDIKQLEQRLG--------DNADVIPGDSNDSSVLKKAGIDRC 72 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT-T-CCEEEEECCCHHHHHHHHHHHC--------TTCEEEESCTTSHHHHHHHTTTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHHC-C-CCEEEEECCChHHHHHHHHhhc--------CCCeEEEcCCCCHHHHHHcChhhC
Confidence 4679999875333 23334332 3 479999998 454444333221 246788888753 3433 23679
Q ss_pred eEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecC
Q 025141 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (257)
Q Consensus 177 DvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~ 220 (257)
|+|++...+.. ....... ..+.+.|...++....
T Consensus 73 d~vi~~~~~d~---------~n~~~~~-~a~~~~~~~~ii~~~~ 106 (153)
T 1id1_A 73 RAILALSDNDA---------DNAFVVL-SAKDMSSDVKTVLAVS 106 (153)
T ss_dssp SEEEECSSCHH---------HHHHHHH-HHHHHTSSSCEEEECS
T ss_pred CEEEEecCChH---------HHHHHHH-HHHHHCCCCEEEEEEC
Confidence 99998764311 1122222 3456667776666543
No 445
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=86.43 E-value=3.2 Score=34.08 Aligned_cols=76 Identities=22% Similarity=0.290 Sum_probs=51.3
Q ss_pred CCCeEEEEeccchH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hh--
Q 025141 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LE-- 170 (257)
Q Consensus 102 ~~~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~------l~-- 170 (257)
+.+.||+.|+++|. +++++++. + .+|.+++.+++-.+...+.+... .+++.++..|..+. ++
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~ 80 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALARE-G-AAVVVADINAEAAEAVAKQIVAD-----GGTAISVAVDVSDPESAKAMADRT 80 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHT-----TCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-C-CEEEEEcCCHHHHHHHHHHHHhc-----CCcEEEEEccCCCHHHHHHHHHHH
Confidence 56789999987653 45555554 3 58999999998877666554322 35778888887542 11
Q ss_pred -cCCCceeEEEEcCC
Q 025141 171 -SRKESYDVIIGDLA 184 (257)
Q Consensus 171 -~~~~~fDvIi~D~~ 184 (257)
+.-++.|+++.++.
T Consensus 81 ~~~~g~id~li~~Ag 95 (253)
T 3qiv_A 81 LAEFGGIDYLVNNAA 95 (253)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 11247899999874
No 446
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=86.29 E-value=2.6 Score=35.03 Aligned_cols=77 Identities=23% Similarity=0.345 Sum_probs=51.9
Q ss_pred CCCeEEEEec-cchH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hhc
Q 025141 102 NPKTIFIMGG-GEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LES 171 (257)
Q Consensus 102 ~~~~VL~IG~-G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~------l~~ 171 (257)
+.+.||+.|+ |.|. +++++++. + .+|++++.+++-.+...+.+... ...++.++..|..+. ++.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~-G-~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dl~~~~~v~~~~~~ 94 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLE-G-ADVVISDYHERRLGETRDQLADL----GLGRVEAVVCDVTSTEAVDALITQ 94 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHTT----CSSCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHC-C-CEEEEecCCHHHHHHHHHHHHhc----CCCceEEEEeCCCCHHHHHHHHHH
Confidence 5688999998 4433 45666664 4 58999999998877666655322 235888998887442 211
Q ss_pred ---CCCceeEEEEcCC
Q 025141 172 ---RKESYDVIIGDLA 184 (257)
Q Consensus 172 ---~~~~fDvIi~D~~ 184 (257)
.-++.|++|..+.
T Consensus 95 ~~~~~g~id~li~~Ag 110 (266)
T 3o38_A 95 TVEKAGRLDVLVNNAG 110 (266)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHHhCCCcEEEECCC
Confidence 1257899999875
No 447
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=86.24 E-value=4.2 Score=33.22 Aligned_cols=76 Identities=12% Similarity=0.188 Sum_probs=51.2
Q ss_pred CCCeEEEEeccchH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------H---
Q 025141 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------L--- 169 (257)
Q Consensus 102 ~~~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~------l--- 169 (257)
+.+.+|+.|+++|. +++.+++. + .+|.+++.+++-.+...+.+... ..++.++..|..+. +
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~-G-~~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~ 76 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASK-G-ATVVGTATSQASAEKFENSMKEK-----GFKARGLVLNISDIESIQNFFAEI 76 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHT-T-CEEEEEESSHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHHHhc-----CCceEEEEecCCCHHHHHHHHHHH
Confidence 46789999987653 45566654 3 58999999988777665554322 35778888776432 2
Q ss_pred hcCCCceeEEEEcCC
Q 025141 170 ESRKESYDVIIGDLA 184 (257)
Q Consensus 170 ~~~~~~fDvIi~D~~ 184 (257)
....++.|+++..+.
T Consensus 77 ~~~~~~id~li~~Ag 91 (247)
T 3lyl_A 77 KAENLAIDILVNNAG 91 (247)
T ss_dssp HHTTCCCSEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 223457999999875
No 448
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=86.21 E-value=3.2 Score=33.66 Aligned_cols=71 Identities=13% Similarity=0.116 Sum_probs=46.9
Q ss_pred CeEEEEeccchH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHH------HHhcCCC
Q 025141 104 KTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA------ELESRKE 174 (257)
Q Consensus 104 ~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~------~l~~~~~ 174 (257)
|.||+.|+++|. +++.+++. + .+|.+++.+++-++...+.+ ..++.++..|..+ .++...+
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~-G-~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~D~~~~~~v~~~~~~~~~ 71 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAE-G-KATYLTGRSESKLSTVTNCL--------SNNVGYRARDLASHQEVEQLFEQLDS 71 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHT-T-CCEEEEESCHHHHHHHHHTC--------SSCCCEEECCTTCHHHHHHHHHSCSS
T ss_pred CEEEEecCCchHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHH--------hhccCeEeecCCCHHHHHHHHHHHhh
Confidence 468999987654 34555554 4 57999999998777665543 2456677766543 3344456
Q ss_pred ceeEEEEcCC
Q 025141 175 SYDVIIGDLA 184 (257)
Q Consensus 175 ~fDvIi~D~~ 184 (257)
.+|+++..+.
T Consensus 72 ~~d~lv~~Ag 81 (230)
T 3guy_A 72 IPSTVVHSAG 81 (230)
T ss_dssp CCSEEEECCC
T ss_pred cCCEEEEeCC
Confidence 6799999875
No 449
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=85.93 E-value=4.8 Score=29.35 Aligned_cols=70 Identities=23% Similarity=0.297 Sum_probs=41.7
Q ss_pred CCeEEEEeccchH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchH--HHHhc-CCCcee
Q 025141 103 PKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDAR--AELES-RKESYD 177 (257)
Q Consensus 103 ~~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~--~~l~~-~~~~fD 177 (257)
..+|+++|+|.=+ ++..+.+ .+ .+|+++|.+++.++..++.+ .+.++.+|.. +.+.. .-+.+|
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~-~g-~~v~~~d~~~~~~~~~~~~~----------~~~~~~~d~~~~~~l~~~~~~~~d 71 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSE-KG-HDIVLIDIDKDICKKASAEI----------DALVINGDCTKIKTLEDAGIEDAD 71 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH-TT-CEEEEEESCHHHHHHHHHHC----------SSEEEESCTTSHHHHHHTTTTTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHh-CC-CeEEEEECCHHHHHHHHHhc----------CcEEEEcCCCCHHHHHHcCcccCC
Confidence 3589999886533 2334444 33 58999999998776655321 2334555542 22332 235799
Q ss_pred EEEEcCC
Q 025141 178 VIIGDLA 184 (257)
Q Consensus 178 vIi~D~~ 184 (257)
+|++-.+
T Consensus 72 ~vi~~~~ 78 (140)
T 1lss_A 72 MYIAVTG 78 (140)
T ss_dssp EEEECCS
T ss_pred EEEEeeC
Confidence 9998764
No 450
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=85.91 E-value=1.9 Score=40.61 Aligned_cols=61 Identities=8% Similarity=0.052 Sum_probs=35.5
Q ss_pred hhHHHHHHHHHhh--cCCCCCeEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHH-HHHHHHhhh
Q 025141 86 FIYHESLVHPALL--HHPNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEE-VVEFCKSYL 146 (257)
Q Consensus 86 ~~y~e~l~~~~l~--~~~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~-vi~~a~~~~ 146 (257)
..|.+.+..+..- ..-...+||++|+|+ |+-....+...++.+++.+|-|.. .-.+.|+++
T Consensus 13 ~rY~Rqi~l~G~~~q~~L~~~~VlvvG~GGlGseiak~La~aGVg~itlvD~D~Ve~sNL~RQ~l 77 (531)
T 1tt5_A 13 QKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFF 77 (531)
T ss_dssp HHTHHHHHHHHHHHHHHHHHCEEEEECCSHHHHHHHHHHHTTTCSEEEEECCCBBCHHHHHHCTT
T ss_pred HHhhHHHHhcCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCEechhhcccCcc
Confidence 3566655322211 112457999999964 443334344468899999998863 234455443
No 451
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=85.80 E-value=4.3 Score=32.78 Aligned_cols=93 Identities=18% Similarity=0.174 Sum_probs=54.7
Q ss_pred eEEEEeccchH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHH--HHhc-CCCceeEE
Q 025141 105 TIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA--ELES-RKESYDVI 179 (257)
Q Consensus 105 ~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~--~l~~-~~~~fDvI 179 (257)
+|+++|+|.=+ +++.+.+. + .+|+++|.|++.++...+. ..+.++.+|+.+ .++. .-+..|+|
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~-g-~~v~vid~~~~~~~~l~~~----------~~~~~i~gd~~~~~~l~~a~i~~ad~v 69 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR-K-YGVVIINKDRELCEEFAKK----------LKATIIHGDGSHKEILRDAEVSKNDVV 69 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT-T-CCEEEEESCHHHHHHHHHH----------SSSEEEESCTTSHHHHHHHTCCTTCEE
T ss_pred EEEEECCCHHHHHHHHHHHhC-C-CeEEEEECCHHHHHHHHHH----------cCCeEEEcCCCCHHHHHhcCcccCCEE
Confidence 68999975422 23344443 3 4899999999988765432 134677888754 2333 23678999
Q ss_pred EEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEec
Q 025141 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~ 219 (257)
++...+.. ....... ..+.+.+...++...
T Consensus 70 i~~~~~d~---------~n~~~~~-~a~~~~~~~~iia~~ 99 (218)
T 3l4b_C 70 VILTPRDE---------VNLFIAQ-LVMKDFGVKRVVSLV 99 (218)
T ss_dssp EECCSCHH---------HHHHHHH-HHHHTSCCCEEEECC
T ss_pred EEecCCcH---------HHHHHHH-HHHHHcCCCeEEEEE
Confidence 98754321 1122333 344566666666544
No 452
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=85.73 E-value=8.5 Score=35.12 Aligned_cols=108 Identities=14% Similarity=0.204 Sum_probs=60.4
Q ss_pred CCCCeEEEEeccchHH--HHHHHhcCCCcEEEEEECCHHHHHHHHhhh-hhccCCC--------CCCCeEEEEcchHHHH
Q 025141 101 PNPKTIFIMGGGEGST--AREILRHKTVEKVVMCDIDEEVVEFCKSYL-VVNKEAF--------SDPRLELVINDARAEL 169 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~--~~~l~~~~~~~~v~~VEid~~vi~~a~~~~-~~~~~~~--------~~~rv~i~~~Da~~~l 169 (257)
....+.-+||+|-=++ +..+++. + -+|+++|+|++.++..++-- +.....+ ...++++- .|
T Consensus 9 ~~~~~~~ViGlGyvGlp~A~~La~~-G-~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~t-td----- 80 (431)
T 3ojo_A 9 HHGSKLTVVGLGYIGLPTSIMFAKH-G-VDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVS-TT----- 80 (431)
T ss_dssp ---CEEEEECCSTTHHHHHHHHHHT-T-CEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEE-SS-----
T ss_pred ccCCccEEEeeCHHHHHHHHHHHHC-C-CEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEe-Cc-----
Confidence 3467889999986554 4455554 3 48999999999998877631 1100000 01233322 12
Q ss_pred hcCCCceeEEEEcCCCCCCCC--cccCCch-HHHHHHHHcCcCCCCcEEEEecC
Q 025141 170 ESRKESYDVIIGDLADPIEGG--PCYKLYT-KSFYEFVVKPRLNPEGIFVTQAG 220 (257)
Q Consensus 170 ~~~~~~fDvIi~D~~~~~~~~--p~~~L~t-~ef~~~~~~~~L~pgGil~~~~~ 220 (257)
.+.-|+||+-.+.|.... -...+-. ....+. +.+.|++|-+++..+.
T Consensus 81 ---~~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~-i~~~l~~g~iVV~~ST 130 (431)
T 3ojo_A 81 ---PEASDVFIIAVPTPNNDDQYRSCDISLVMRALDS-ILPFLKKGNTIIVEST 130 (431)
T ss_dssp ---CCCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHH-HGGGCCTTEEEEECSC
T ss_pred ---hhhCCEEEEEeCCCccccccCCccHHHHHHHHHH-HHHhCCCCCEEEEecC
Confidence 135799999887654210 0012221 234456 6788999887776543
No 453
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=85.71 E-value=1.4 Score=40.53 Aligned_cols=35 Identities=17% Similarity=0.389 Sum_probs=23.9
Q ss_pred CCCeEEEEeccc-hHHHHHHHhcCCCcEEEEEECCH
Q 025141 102 NPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDE 136 (257)
Q Consensus 102 ~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~ 136 (257)
...+||++|+|+ |+-....+...++.+++.+|-|.
T Consensus 39 ~~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~ 74 (434)
T 1tt5_B 39 DTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDT 74 (434)
T ss_dssp HTCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCB
T ss_pred cCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 346899999965 33333333346789999999763
No 454
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=85.70 E-value=6.5 Score=36.28 Aligned_cols=91 Identities=13% Similarity=0.124 Sum_probs=54.1
Q ss_pred CCCCeEEEEeccc-hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEE
Q 025141 101 PNPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVI 179 (257)
Q Consensus 101 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvI 179 (257)
...++|+++|+|. |......++..+ .+|+++|+||.-...+... .+++ .+..+.+ ...|+|
T Consensus 245 L~GKTVgVIG~G~IGr~vA~~lrafG-a~Viv~d~dp~~a~~A~~~-----------G~~v--v~LeElL----~~ADIV 306 (464)
T 3n58_A 245 MAGKVAVVCGYGDVGKGSAQSLAGAG-ARVKVTEVDPICALQAAMD-----------GFEV--VTLDDAA----STADIV 306 (464)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSHHHHHHHHHT-----------TCEE--CCHHHHG----GGCSEE
T ss_pred ccCCEEEEECcCHHHHHHHHHHHHCC-CEEEEEeCCcchhhHHHhc-----------Ccee--ccHHHHH----hhCCEE
Confidence 4679999999986 333333344345 5999999999754333321 1121 2333444 357999
Q ss_pred EEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCC
Q 025141 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPA 222 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~ 222 (257)
+.... ..++.+.+.++. +|||++++ |.+..
T Consensus 307 v~atg-------t~~lI~~e~l~~-----MK~GAILI-NvGRg 336 (464)
T 3n58_A 307 VTTTG-------NKDVITIDHMRK-----MKDMCIVG-NIGHF 336 (464)
T ss_dssp EECCS-------SSSSBCHHHHHH-----SCTTEEEE-ECSSS
T ss_pred EECCC-------CccccCHHHHhc-----CCCCeEEE-EcCCC
Confidence 86421 135777776664 67777665 76543
No 455
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=85.63 E-value=12 Score=30.87 Aligned_cols=76 Identities=20% Similarity=0.189 Sum_probs=51.6
Q ss_pred CCCeEEEEeccchH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hh--
Q 025141 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LE-- 170 (257)
Q Consensus 102 ~~~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~------l~-- 170 (257)
+.|.+|+.|+++|. +++.+++. + .+|.+++.+++-.+...+.+... ..++.++..|..+. ++
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~ 82 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQ-G-ADLVLAARTVERLEDVAKQVTDT-----GRRALSVGTDITDDAQVAHLVDET 82 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHC-c-CEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEEcCCCCHHHHHHHHHHH
Confidence 56889999987664 45556554 4 58999999988777666554322 35788888776432 21
Q ss_pred -cCCCceeEEEEcCC
Q 025141 171 -SRKESYDVIIGDLA 184 (257)
Q Consensus 171 -~~~~~fDvIi~D~~ 184 (257)
+.-++.|+++.++.
T Consensus 83 ~~~~g~id~lv~nAg 97 (264)
T 3ucx_A 83 MKAYGRVDVVINNAF 97 (264)
T ss_dssp HHHTSCCSEEEECCC
T ss_pred HHHcCCCcEEEECCC
Confidence 12357999999874
No 456
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=85.63 E-value=8.8 Score=32.29 Aligned_cols=76 Identities=17% Similarity=0.205 Sum_probs=52.4
Q ss_pred CCCeEEEEeccchH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hh--
Q 025141 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LE-- 170 (257)
Q Consensus 102 ~~~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~------l~-- 170 (257)
+.|.+|+-|++.|. +++.+++. + .+|..++.+++-++.+.+.+... ..++..+..|..+. ++
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~-G-a~Vv~~~~~~~~~~~~~~~i~~~-----g~~~~~~~~Dvt~~~~v~~~~~~~ 78 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALN-D-SIVVAVELLEDRLNQIVQELRGM-----GKEVLGVKADVSKKKDVEEFVRRT 78 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHc-C-CEEEEEECCHHHHHHHHHHHHhc-----CCcEEEEEccCCCHHHHHHHHHHH
Confidence 57889999987765 44555553 4 68999999999887776655432 25777888776432 22
Q ss_pred -cCCCceeEEEEcCC
Q 025141 171 -SRKESYDVIIGDLA 184 (257)
Q Consensus 171 -~~~~~fDvIi~D~~ 184 (257)
+.-++.|+++.++-
T Consensus 79 ~~~~G~iDiLVNNAG 93 (254)
T 4fn4_A 79 FETYSRIDVLCNNAG 93 (254)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCc
Confidence 12367999999874
No 457
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=85.59 E-value=1.9 Score=37.78 Aligned_cols=103 Identities=10% Similarity=0.091 Sum_probs=63.9
Q ss_pred CCeEEEEeccc--hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhh-----ccCCCCC---------CCeEEEEcchH
Q 025141 103 PKTIFIMGGGE--GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVV-----NKEAFSD---------PRLELVINDAR 166 (257)
Q Consensus 103 ~~~VL~IG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~-----~~~~~~~---------~rv~i~~~Da~ 166 (257)
.++|-+||+|. ++++..+++. + -+|+++|.+++.++.+++.... ...++.+ .++++ ..|..
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~-G-~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~-~~~~~ 82 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG-G-FRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTNLA 82 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-T-CCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECCHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEE-eCCHH
Confidence 46899999985 3456666664 3 4799999999999888654311 0000111 13343 23443
Q ss_pred HHHhcCCCceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecC
Q 025141 167 AELESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (257)
Q Consensus 167 ~~l~~~~~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~ 220 (257)
+.+ ...|+|+...+.. + -...++|+. +.+.++|+-+++.++.
T Consensus 83 eav----~~aDlVieavpe~----~---~~k~~v~~~-l~~~~~~~~Ii~s~tS 124 (319)
T 2dpo_A 83 EAV----EGVVHIQECVPEN----L---DLKRKIFAQ-LDSIVDDRVVLSSSSS 124 (319)
T ss_dssp HHT----TTEEEEEECCCSC----H---HHHHHHHHH-HHTTCCSSSEEEECCS
T ss_pred HHH----hcCCEEEEeccCC----H---HHHHHHHHH-HHhhCCCCeEEEEeCC
Confidence 333 4579999987631 1 123567788 7888999988876643
No 458
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=85.48 E-value=3.9 Score=35.74 Aligned_cols=58 Identities=14% Similarity=0.212 Sum_probs=32.6
Q ss_pred cCcccccCCCchhHHHHHHHHHhhcCCCCCeEEEEeccchH--HHHHHHhcCCCcEEEEEECC
Q 025141 75 DGKLQSAEVDEFIYHESLVHPALLHHPNPKTIFIMGGGEGS--TAREILRHKTVEKVVMCDID 135 (257)
Q Consensus 75 dG~~~~~~~~~~~y~e~l~~~~l~~~~~~~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid 135 (257)
||.+...+-|-.-+.+.+... ......++||++|+|+-+ ++..+++ .+..+|+++..+
T Consensus 122 ~g~l~G~NTD~~Gf~~~L~~~--~~~l~gk~~lVlGAGGaaraia~~L~~-~G~~~v~v~nRt 181 (312)
T 3t4e_A 122 DGYLRGYNTDGTGHIRAIKES--GFDMRGKTMVLLGAGGAATAIGAQAAI-EGIKEIKLFNRK 181 (312)
T ss_dssp TTEEEEECHHHHHHHHHHHHT--TCCCTTCEEEEECCSHHHHHHHHHHHH-TTCSEEEEEECS
T ss_pred CCEEEEeCCcHHHHHHHHHhc--CCCcCCCEEEEECcCHHHHHHHHHHHH-cCCCEEEEEECC
Confidence 455444444433333344321 123467899999986332 2334444 466799999998
No 459
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=85.41 E-value=2.3 Score=37.65 Aligned_cols=70 Identities=24% Similarity=0.391 Sum_probs=39.5
Q ss_pred CCCCeEEEEeccchHHHHHHHhc-CCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchH--HHHhcCCCcee
Q 025141 101 PNPKTIFIMGGGEGSTAREILRH-KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDAR--AELESRKESYD 177 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~--~~l~~~~~~fD 177 (257)
.+..|||+||+| .+++.+++. .....|+++|++++-++.+++.. +.+..|+. +-+...-.+.|
T Consensus 14 g~~mkilvlGaG--~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~~~~------------~~~~~d~~d~~~l~~~~~~~D 79 (365)
T 3abi_A 14 GRHMKVLILGAG--NIGRAIAWDLKDEFDVYIGDVNNENLEKVKEFA------------TPLKVDASNFDKLVEVMKEFE 79 (365)
T ss_dssp --CCEEEEECCS--HHHHHHHHHHTTTSEEEEEESCHHHHHHHTTTS------------EEEECCTTCHHHHHHHHTTCS
T ss_pred CCccEEEEECCC--HHHHHHHHHHhcCCCeEEEEcCHHHHHHHhccC------------CcEEEecCCHHHHHHHHhCCC
Confidence 456789999984 333332221 12348999999998887765432 22233332 12222224679
Q ss_pred EEEEcCC
Q 025141 178 VIIGDLA 184 (257)
Q Consensus 178 vIi~D~~ 184 (257)
+|++-.+
T Consensus 80 vVi~~~p 86 (365)
T 3abi_A 80 LVIGALP 86 (365)
T ss_dssp EEEECCC
T ss_pred EEEEecC
Confidence 9988654
No 460
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=85.21 E-value=2 Score=35.24 Aligned_cols=68 Identities=19% Similarity=0.271 Sum_probs=43.0
Q ss_pred CCCeEEEEeccchHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchH--HHHhcC-CCce
Q 025141 102 NPKTIFIMGGGEGSTAREILRH--KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDAR--AELESR-KESY 176 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~--~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~--~~l~~~-~~~f 176 (257)
..++|+++|+| .+++.+++. .... |+++|.|++.++.++ ..+.++.+|+. +.++.. -+..
T Consensus 8 ~~~~viI~G~G--~~G~~la~~L~~~g~-v~vid~~~~~~~~~~------------~~~~~i~gd~~~~~~l~~a~i~~a 72 (234)
T 2aef_A 8 KSRHVVICGWS--ESTLECLRELRGSEV-FVLAEDENVRKKVLR------------SGANFVHGDPTRVSDLEKANVRGA 72 (234)
T ss_dssp --CEEEEESCC--HHHHHHHHHSTTSEE-EEEESCGGGHHHHHH------------TTCEEEESCTTCHHHHHHTTCTTC
T ss_pred CCCEEEEECCC--hHHHHHHHHHHhCCe-EEEEECCHHHHHHHh------------cCCeEEEcCCCCHHHHHhcCcchh
Confidence 34689999985 444444432 1124 999999998776554 13577888875 344433 3678
Q ss_pred eEEEEcCC
Q 025141 177 DVIIGDLA 184 (257)
Q Consensus 177 DvIi~D~~ 184 (257)
|.|++-..
T Consensus 73 d~vi~~~~ 80 (234)
T 2aef_A 73 RAVIVDLE 80 (234)
T ss_dssp SEEEECCS
T ss_pred cEEEEcCC
Confidence 99888654
No 461
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=85.21 E-value=2.1 Score=34.76 Aligned_cols=71 Identities=11% Similarity=0.117 Sum_probs=45.0
Q ss_pred CCCCeEEEEeccchH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCe-EEEEcchHHHHhcCCCce
Q 025141 101 PNPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRL-ELVINDARAELESRKESY 176 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv-~i~~~Da~~~l~~~~~~f 176 (257)
-..++||+.|+.+|. +++++++. + .+|+++..++.-.+...+ .++ +++..|..+.+...-+..
T Consensus 19 l~~~~ilVtGatG~iG~~l~~~L~~~-G-~~V~~~~R~~~~~~~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~ 85 (236)
T 3e8x_A 19 FQGMRVLVVGANGKVARYLLSELKNK-G-HEPVAMVRNEEQGPELRE-----------RGASDIVVANLEEDFSHAFASI 85 (236)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHT-T-CEEEEEESSGGGHHHHHH-----------TTCSEEEECCTTSCCGGGGTTC
T ss_pred cCCCeEEEECCCChHHHHHHHHHHhC-C-CeEEEEECChHHHHHHHh-----------CCCceEEEcccHHHHHHHHcCC
Confidence 356899999975433 34444443 3 589999998875543321 356 788888763333333578
Q ss_pred eEEEEcCC
Q 025141 177 DVIIGDLA 184 (257)
Q Consensus 177 DvIi~D~~ 184 (257)
|+|+..+.
T Consensus 86 D~vi~~ag 93 (236)
T 3e8x_A 86 DAVVFAAG 93 (236)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 99998875
No 462
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=85.13 E-value=10 Score=33.20 Aligned_cols=107 Identities=13% Similarity=0.134 Sum_probs=57.0
Q ss_pred CCCCeEEEEeccchH--HHHHHHhcCCCcEEEEEECCHHHHHHH----HhhhhhccCCCCCCCeEEEEcchHHHHhcCCC
Q 025141 101 PNPKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFC----KSYLVVNKEAFSDPRLELVINDARAELESRKE 174 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a----~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~ 174 (257)
..+.+|.+||+|.=+ ++..++...-..+++.+|++++.++.. ++-+++. ..++++..+|... + .
T Consensus 3 ~~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~-----~~~v~i~~~~~~a-~----~ 72 (326)
T 3pqe_A 3 KHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFA-----PQPVKTSYGTYED-C----K 72 (326)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGS-----SSCCEEEEECGGG-G----T
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccc-----cCCeEEEeCcHHH-h----C
Confidence 346789999986422 233344433235899999998866542 2212321 1345666555321 2 4
Q ss_pred ceeEEEEcCCCCCCCCc-ccCCc--h----HHHHHHHHcCcCCCCcEEEEec
Q 025141 175 SYDVIIGDLADPIEGGP-CYKLY--T----KSFYEFVVKPRLNPEGIFVTQA 219 (257)
Q Consensus 175 ~fDvIi~D~~~~~~~~p-~~~L~--t----~ef~~~~~~~~L~pgGil~~~~ 219 (257)
..|+|++-+..|...+. ...|+ + ++..+. +.+ ..|++++++-+
T Consensus 73 ~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~-I~~-~~p~a~vlvvt 122 (326)
T 3pqe_A 73 DADIVCICAGANQKPGETRLELVEKNLKIFKGIVSE-VMA-SGFDGIFLVAT 122 (326)
T ss_dssp TCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHH-HHH-TTCCSEEEECS
T ss_pred CCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHH-HHH-hcCCeEEEEcC
Confidence 57999997654431111 11222 2 233333 233 57899877544
No 463
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=85.05 E-value=12 Score=32.85 Aligned_cols=109 Identities=16% Similarity=0.156 Sum_probs=57.5
Q ss_pred CCCeEEEEeccchH--HHHHHHhcCCCcEEEEEECCHHHHHH-HHhhhhhccCCCCCCCeEEE-EcchHHHHhcCCCcee
Q 025141 102 NPKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEF-CKSYLVVNKEAFSDPRLELV-INDARAELESRKESYD 177 (257)
Q Consensus 102 ~~~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~-a~~~~~~~~~~~~~~rv~i~-~~Da~~~l~~~~~~fD 177 (257)
+..+|.+||+|.-+ ++..++...-..++..+|++++.++- +.+.-... .+. ....++ .+|... -...|
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~--~~~-~~~~i~~~~d~~~-----~~~aD 89 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGS--LFL-KTPKIVSSKDYSV-----TANSK 89 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTG--GGC-SCCEEEECSSGGG-----GTTEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhh--hcc-CCCeEEEcCCHHH-----hCCCC
Confidence 45799999997433 34455554333589999999876543 22211110 011 122333 345321 25689
Q ss_pred EEEEcCCCCCCCCc-ccCCch------HHHHHHHHcCcCCCCcEEEEecC
Q 025141 178 VIIGDLADPIEGGP-CYKLYT------KSFYEFVVKPRLNPEGIFVTQAG 220 (257)
Q Consensus 178 vIi~D~~~~~~~~p-~~~L~t------~ef~~~~~~~~L~pgGil~~~~~ 220 (257)
+|++-+-.|...+. ...|+. +++.+. +.+. .|++++++-.+
T Consensus 90 iVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~-i~~~-~p~a~vlvvtN 137 (331)
T 4aj2_A 90 LVIITAGARQQEGESRLNLVQRNVNIFKFIIPN-VVKY-SPQCKLLIVSN 137 (331)
T ss_dssp EEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHH-HHHH-CTTCEEEECSS
T ss_pred EEEEccCCCCCCCccHHHHHHHHHHHHHHHHHH-HHHH-CCCeEEEEecC
Confidence 99887654331111 113432 244444 3444 89998876443
No 464
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=84.96 E-value=6.9 Score=33.57 Aligned_cols=92 Identities=17% Similarity=0.206 Sum_probs=53.1
Q ss_pred CeEEEEeccchHH--HHHHHhcCCCcEEEEEECCHHHHHHHHhh-hhhccCCCCCCCeEE----EEcchHHHHhcCCCce
Q 025141 104 KTIFIMGGGEGST--AREILRHKTVEKVVMCDIDEEVVEFCKSY-LVVNKEAFSDPRLEL----VINDARAELESRKESY 176 (257)
Q Consensus 104 ~~VL~IG~G~G~~--~~~l~~~~~~~~v~~VEid~~vi~~a~~~-~~~~~~~~~~~rv~i----~~~Da~~~l~~~~~~f 176 (257)
.+|++||+|.-+. +..+.+. + .+|+.++.++ . +..++. +.... ..+..++ ...|... + +.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-g-~~V~~~~r~~-~-~~i~~~g~~~~~---~~g~~~~~~~~~~~~~~~-~----~~~ 70 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS-G-EDVHFLLRRD-Y-EAIAGNGLKVFS---INGDFTLPHVKGYRAPEE-I----GPM 70 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT-S-CCEEEECSTT-H-HHHHHTCEEEEE---TTCCEEESCCCEESCHHH-H----CCC
T ss_pred CEEEEECcCHHHHHHHHHHHHC-C-CeEEEEEcCc-H-HHHHhCCCEEEc---CCCeEEEeeceeecCHHH-c----CCC
Confidence 4799999986553 4455543 3 4799999887 3 444432 21111 1122221 1233322 2 469
Q ss_pred eEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEE
Q 025141 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (257)
Q Consensus 177 DvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~ 217 (257)
|+|++-... ....+.++. ++..|+|+.+++.
T Consensus 71 D~vilavk~---------~~~~~~l~~-l~~~l~~~~~iv~ 101 (312)
T 3hn2_A 71 DLVLVGLKT---------FANSRYEEL-IRPLVEEGTQILT 101 (312)
T ss_dssp SEEEECCCG---------GGGGGHHHH-HGGGCCTTCEEEE
T ss_pred CEEEEecCC---------CCcHHHHHH-HHhhcCCCCEEEE
Confidence 999997542 123467788 7889999987664
No 465
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=84.92 E-value=1.6 Score=41.87 Aligned_cols=35 Identities=20% Similarity=0.368 Sum_probs=25.3
Q ss_pred CCCeEEEEeccc-hHHHHHHHhcCCCcEEEEEECCH
Q 025141 102 NPKTIFIMGGGE-GSTAREILRHKTVEKVVMCDIDE 136 (257)
Q Consensus 102 ~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~ 136 (257)
...+||+||+|+ |+.....+...++.+++.||-|.
T Consensus 325 ~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~ 360 (615)
T 4gsl_A 325 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 360 (615)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 357999999984 44333333346889999999985
No 466
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=84.88 E-value=1.2 Score=39.52 Aligned_cols=94 Identities=17% Similarity=0.164 Sum_probs=57.7
Q ss_pred CCCCeEEEEeccc--hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeE
Q 025141 101 PNPKTIFIMGGGE--GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDV 178 (257)
Q Consensus 101 ~~~~~VL~IG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDv 178 (257)
+..++|.+||+|. +.+++.+.+. + .+|+++|.+++..+.+++. . +. ...|..+.++......|+
T Consensus 6 ~~~~kIgIIG~G~mG~slA~~L~~~-G-~~V~~~dr~~~~~~~a~~~-G----------~~-~~~~~~e~~~~a~~~aDl 71 (341)
T 3ktd_A 6 DISRPVCILGLGLIGGSLLRDLHAA-N-HSVFGYNRSRSGAKSAVDE-G----------FD-VSADLEATLQRAAAEDAL 71 (341)
T ss_dssp CCSSCEEEECCSHHHHHHHHHHHHT-T-CCEEEECSCHHHHHHHHHT-T----------CC-EESCHHHHHHHHHHTTCE
T ss_pred CCCCEEEEEeecHHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHc-C----------Ce-eeCCHHHHHHhcccCCCE
Confidence 4557899999983 4456666654 3 4799999999988877652 1 11 134555554322224699
Q ss_pred EEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecC
Q 025141 179 IIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (257)
Q Consensus 179 Ii~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~ 220 (257)
|++..+.. ...+.++. +... +|+. +++..+
T Consensus 72 VilavP~~---------~~~~vl~~-l~~~-~~~~-iv~Dv~ 101 (341)
T 3ktd_A 72 IVLAVPMT---------AIDSLLDA-VHTH-APNN-GFTDVV 101 (341)
T ss_dssp EEECSCHH---------HHHHHHHH-HHHH-CTTC-CEEECC
T ss_pred EEEeCCHH---------HHHHHHHH-HHcc-CCCC-EEEEcC
Confidence 99876521 24566676 5554 6665 455543
No 467
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=84.76 E-value=11 Score=31.90 Aligned_cols=76 Identities=16% Similarity=0.191 Sum_probs=45.6
Q ss_pred CCCeEEEEeccchH---HHHHHHhcCCCcEEEEEECCH--HHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hh
Q 025141 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDE--EVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LE 170 (257)
Q Consensus 102 ~~~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid~--~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~------l~ 170 (257)
+.|.||+.|+++|. +++.+++. + .+|.+++.+. .-.+...+..... ..++.++..|..+. ++
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~-G-~~V~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~ 120 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYARE-G-ADVAINYLPAEEEDAQQVKALIEEC-----GRKAVLLPGDLSDESFARSLVH 120 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-T-CEEEEECCGGGHHHHHHHHHHHHHT-----TCCEEECCCCTTSHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-C-CEEEEEeCCcchhHHHHHHHHHHHc-----CCcEEEEEecCCCHHHHHHHHH
Confidence 46789999987654 44555554 3 5898888873 3333333332221 24677777776432 21
Q ss_pred ---cCCCceeEEEEcCC
Q 025141 171 ---SRKESYDVIIGDLA 184 (257)
Q Consensus 171 ---~~~~~fDvIi~D~~ 184 (257)
+.-++.|+++.++.
T Consensus 121 ~~~~~~g~iD~lv~nAg 137 (294)
T 3r3s_A 121 KAREALGGLDILALVAG 137 (294)
T ss_dssp HHHHHHTCCCEEEECCC
T ss_pred HHHHHcCCCCEEEECCC
Confidence 12257899999875
No 468
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=84.60 E-value=5.7 Score=33.13 Aligned_cols=76 Identities=17% Similarity=0.280 Sum_probs=48.6
Q ss_pred CCCeEEEEeccchH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hh--
Q 025141 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LE-- 170 (257)
Q Consensus 102 ~~~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~------l~-- 170 (257)
..++||+.|+++|. +++.+++. + .+|++++.++.-.+...+.+... ..++.++..|..+. ++
T Consensus 30 ~~k~vlITGasggIG~~la~~L~~~-G-~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~ 102 (272)
T 1yb1_A 30 TGEIVLITGAGHGIGRLTAYEFAKL-K-SKLVLWDINKHGLEETAAKCKGL-----GAKVHTFVVDCSNREDIYSSAKKV 102 (272)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-C-CEEEEEEcCHHHHHHHHHHHHhc-----CCeEEEEEeeCCCHHHHHHHHHHH
Confidence 45789999876553 34444543 3 58999999987766554443321 24788888886432 11
Q ss_pred -cCCCceeEEEEcCC
Q 025141 171 -SRKESYDVIIGDLA 184 (257)
Q Consensus 171 -~~~~~fDvIi~D~~ 184 (257)
..-++.|+||..+.
T Consensus 103 ~~~~g~iD~li~~Ag 117 (272)
T 1yb1_A 103 KAEIGDVSILVNNAG 117 (272)
T ss_dssp HHHTCCCSEEEECCC
T ss_pred HHHCCCCcEEEECCC
Confidence 12257899999875
No 469
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=84.50 E-value=0.81 Score=40.62 Aligned_cols=34 Identities=21% Similarity=0.442 Sum_probs=25.9
Q ss_pred CCeEEEEeccchHHH--HHHHhcCCCcEEEEEECCH
Q 025141 103 PKTIFIMGGGEGSTA--REILRHKTVEKVVMCDIDE 136 (257)
Q Consensus 103 ~~~VL~IG~G~G~~~--~~l~~~~~~~~v~~VEid~ 136 (257)
.|||++||+|.+++. ..|.+..+..+|+.||-++
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~ 37 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNE 37 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCC
Confidence 589999999988864 4455554446899999775
No 470
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=84.43 E-value=7.7 Score=30.80 Aligned_cols=68 Identities=15% Similarity=0.175 Sum_probs=43.0
Q ss_pred eEEEEeccchH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025141 105 TIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (257)
Q Consensus 105 ~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~ 181 (257)
+||+.|+.++. +++++++. + .+|+++..++.-.+.. ..++++++.+|..+.-...-+..|+||.
T Consensus 2 kilVtGatG~iG~~l~~~L~~~-g-~~V~~~~R~~~~~~~~-----------~~~~~~~~~~D~~d~~~~~~~~~d~vi~ 68 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRR-G-HEVLAVVRDPQKAADR-----------LGATVATLVKEPLVLTEADLDSVDAVVD 68 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHH-----------TCTTSEEEECCGGGCCHHHHTTCSEEEE
T ss_pred EEEEEcCCCHHHHHHHHHHHHC-C-CEEEEEEecccccccc-----------cCCCceEEecccccccHhhcccCCEEEE
Confidence 68999875332 33444443 3 5899999987654321 1257888888876532211246899998
Q ss_pred cCCC
Q 025141 182 DLAD 185 (257)
Q Consensus 182 D~~~ 185 (257)
.+..
T Consensus 69 ~ag~ 72 (224)
T 3h2s_A 69 ALSV 72 (224)
T ss_dssp CCCC
T ss_pred CCcc
Confidence 8754
No 471
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=84.26 E-value=4.8 Score=37.14 Aligned_cols=101 Identities=14% Similarity=0.190 Sum_probs=59.6
Q ss_pred CeEEEEeccc--hHHHHHHHhcCCCcEEEEEECCHHHH-HHHHhhhh-h-ccCCCC-------CCCeEEEEcchHHHHhc
Q 025141 104 KTIFIMGGGE--GSTAREILRHKTVEKVVMCDIDEEVV-EFCKSYLV-V-NKEAFS-------DPRLELVINDARAELES 171 (257)
Q Consensus 104 ~~VL~IG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi-~~a~~~~~-~-~~~~~~-------~~rv~i~~~Da~~~l~~ 171 (257)
++|.+||+|. ++++..+++. + -+|+++|++++-. +..++.+. + ....+. ..++++. .|. +-
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~a-G-~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t-~dl-~a--- 127 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLA-G-IETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKIT-SDF-HK--- 127 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-T-CEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEE-SCG-GG---
T ss_pred CEEEEECCCHHHHHHHHHHHHC-C-CeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEe-CCH-HH---
Confidence 6899999995 4456666664 4 4899999999811 11111221 1 000000 0234432 332 11
Q ss_pred CCCceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecC
Q 025141 172 RKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (257)
Q Consensus 172 ~~~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~ 220 (257)
-...|+||...++. + -...++|+. +.+.++|+.+++.|+.
T Consensus 128 -l~~aDlVIeAVpe~----~---~vk~~v~~~-l~~~~~~~aIlasnTS 167 (460)
T 3k6j_A 128 -LSNCDLIVESVIED----M---KLKKELFAN-LENICKSTCIFGTNTS 167 (460)
T ss_dssp -CTTCSEEEECCCSC----H---HHHHHHHHH-HHTTSCTTCEEEECCS
T ss_pred -HccCCEEEEcCCCC----H---HHHHHHHHH-HHhhCCCCCEEEecCC
Confidence 24679999987642 1 123567888 7889999999987754
No 472
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=84.11 E-value=4.5 Score=34.54 Aligned_cols=77 Identities=22% Similarity=0.289 Sum_probs=52.3
Q ss_pred CCCCeEEEEeccchH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hh-
Q 025141 101 PNPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LE- 170 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~------l~- 170 (257)
-+.+.||+.|+++|. +++++++. + .+|.+++.+++-++.+.+.+... ..++.++..|..+. ++
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~-G-~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~d~~~v~~~~~~ 101 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARR-G-ARLVLSDVDQPALEQAVNGLRGQ-----GFDAHGVVCDVRHLDEMVRLADE 101 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHC-C-CEEEEEECCHHHHHHHHHHHHhc-----CCceEEEEccCCCHHHHHHHHHH
Confidence 356889999987664 45555554 4 58999999998887766655422 35778888876442 11
Q ss_pred --cCCCceeEEEEcCC
Q 025141 171 --SRKESYDVIIGDLA 184 (257)
Q Consensus 171 --~~~~~fDvIi~D~~ 184 (257)
+..++.|++|.++.
T Consensus 102 ~~~~~g~id~lvnnAg 117 (301)
T 3tjr_A 102 AFRLLGGVDVVFSNAG 117 (301)
T ss_dssp HHHHHSSCSEEEECCC
T ss_pred HHHhCCCCCEEEECCC
Confidence 11247899999875
No 473
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=84.11 E-value=14 Score=30.91 Aligned_cols=80 Identities=13% Similarity=0.154 Sum_probs=52.1
Q ss_pred CCCCeEEEEeccchH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hhc
Q 025141 101 PNPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LES 171 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~------l~~ 171 (257)
...+.||+.|+++|. +++.+++. + .+|.+++.+++-.+.+.+.+...+ ....++.++..|..+. ++.
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~-G-~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~~Dv~~~~~v~~~~~~ 84 (281)
T 3svt_A 9 FQDRTYLVTGGGSGIGKGVAAGLVAA-G-ASVMIVGRNPDKLAGAVQELEALG--ANGGAIRYEPTDITNEDETARAVDA 84 (281)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHTTC--CSSCEEEEEECCTTSHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHHHHhC--CCCceEEEEeCCCCCHHHHHHHHHH
Confidence 356889999987654 45555554 4 589999999987776655544221 1223788888886442 211
Q ss_pred ---CCCceeEEEEcCC
Q 025141 172 ---RKESYDVIIGDLA 184 (257)
Q Consensus 172 ---~~~~fDvIi~D~~ 184 (257)
..++.|+++.++.
T Consensus 85 ~~~~~g~id~lv~nAg 100 (281)
T 3svt_A 85 VTAWHGRLHGVVHCAG 100 (281)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHHcCCCCEEEECCC
Confidence 1257899999875
No 474
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=83.88 E-value=8.8 Score=34.10 Aligned_cols=100 Identities=14% Similarity=0.187 Sum_probs=56.9
Q ss_pred CeEEEEeccchHH--HHHHHhcCCCcEEEEEE---CCHHHHHHHHhhhh--hccCCCCC------CCeEEEEcchHHHHh
Q 025141 104 KTIFIMGGGEGST--AREILRHKTVEKVVMCD---IDEEVVEFCKSYLV--VNKEAFSD------PRLELVINDARAELE 170 (257)
Q Consensus 104 ~~VL~IG~G~G~~--~~~l~~~~~~~~v~~VE---id~~vi~~a~~~~~--~~~~~~~~------~rv~i~~~Da~~~l~ 170 (257)
.+|.+||+|.-+. +..+++..+ .+|++++ .+++.++.+.+.-. .+...... .++.....|..+.+
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G-~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~- 80 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDG-VEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAI- 80 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTT-EEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHH-
T ss_pred ceEEEECCCHHHHHHHHHHHhCCC-CEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHHh-
Confidence 3799999986443 333333223 4899999 77777765332211 01000000 01222344544433
Q ss_pred cCCCceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 171 SRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 171 ~~~~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
+..|+|++-.+.. ...+.++. ++..|+|+.+++..
T Consensus 81 ---~~aD~Vilav~~~---------~~~~v~~~-l~~~l~~~~ivv~~ 115 (404)
T 3c7a_A 81 ---SGADVVILTVPAF---------AHEGYFQA-MAPYVQDSALIVGL 115 (404)
T ss_dssp ---TTCSEEEECSCGG---------GHHHHHHH-HTTTCCTTCEEEET
T ss_pred ---CCCCEEEEeCchH---------HHHHHHHH-HHhhCCCCcEEEEc
Confidence 3589999976531 14678888 78899988877653
No 475
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=83.65 E-value=6.6 Score=34.27 Aligned_cols=58 Identities=21% Similarity=0.218 Sum_probs=32.1
Q ss_pred cCcccccCCCchhHHHHHHHHHhhcCCCCCeEEEEeccchH--HHHHHHhcCCCcEEEEEECC
Q 025141 75 DGKLQSAEVDEFIYHESLVHPALLHHPNPKTIFIMGGGEGS--TAREILRHKTVEKVVMCDID 135 (257)
Q Consensus 75 dG~~~~~~~~~~~y~e~l~~~~l~~~~~~~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid 135 (257)
||.+...+-|-.-+.+.+.. .....+.++||++|+|+-+ ++..+++ .+..+|+++..+
T Consensus 128 ~g~l~G~NTD~~Gf~~~L~~--~~~~l~gk~~lVlGaGG~g~aia~~L~~-~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 128 DGVLTGHITDGTGYMRALKE--AGHDIIGKKMTICGAGGAATAICIQAAL-DGVKEISIFNRK 187 (315)
T ss_dssp TTEEEEECCHHHHHHHHHHH--TTCCCTTSEEEEECCSHHHHHHHHHHHH-TTCSEEEEEECS
T ss_pred CCEEEEeCCCHHHHHHHHHH--cCCCccCCEEEEECCChHHHHHHHHHHH-CCCCEEEEEECC
Confidence 45444334443333334432 1123467899999986221 2334444 455689999998
No 476
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=83.54 E-value=2.5 Score=39.19 Aligned_cols=102 Identities=19% Similarity=0.306 Sum_probs=62.7
Q ss_pred CCeEEEEeccc--hHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhc-cCCCCC------------CCeEEEEcchHH
Q 025141 103 PKTIFIMGGGE--GSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVN-KEAFSD------------PRLELVINDARA 167 (257)
Q Consensus 103 ~~~VL~IG~G~--G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~-~~~~~~------------~rv~i~~~Da~~ 167 (257)
-++|.+||+|. ++++..+++. + -+|+++|.+++.++.+++..... ...... .+++.. .|. +
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~a-G-~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~-~~~-~ 80 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASH-G-HQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPV-TDI-H 80 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-T-CCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEE-CCG-G
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-C-CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEe-CCH-H
Confidence 46899999985 3456666664 4 47999999999999887653211 000001 133332 332 1
Q ss_pred HHhcCCCceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecC
Q 025141 168 ELESRKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (257)
Q Consensus 168 ~l~~~~~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~ 220 (257)
-+ ...|+||...++.. -...+++++ +.+.++|+.+++.|..
T Consensus 81 ~~----~~aDlVIeAVpe~~-------~vk~~v~~~-l~~~~~~~~IlasntS 121 (483)
T 3mog_A 81 AL----AAADLVIEAASERL-------EVKKALFAQ-LAEVCPPQTLLTTNTS 121 (483)
T ss_dssp GG----GGCSEEEECCCCCH-------HHHHHHHHH-HHHHSCTTCEEEECCS
T ss_pred Hh----cCCCEEEEcCCCcH-------HHHHHHHHH-HHHhhccCcEEEecCC
Confidence 12 45799998875321 123567787 6888899988877653
No 477
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=83.52 E-value=8 Score=32.55 Aligned_cols=73 Identities=25% Similarity=0.289 Sum_probs=49.8
Q ss_pred CCCCeEEEEeccchH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hhc
Q 025141 101 PNPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LES 171 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~------l~~ 171 (257)
-+.+.||+.|+++|. +++.+++. + .+|.+++.++.-.+.+.+.+ ..++.++..|..+. ++.
T Consensus 14 l~gk~vlVTGas~gIG~~~a~~L~~~-G-~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~Dl~d~~~v~~~~~~ 83 (291)
T 3rd5_A 14 FAQRTVVITGANSGLGAVTARELARR-G-ATVIMAVRDTRKGEAAARTM--------AGQVEVRELDLQDLSSVRRFADG 83 (291)
T ss_dssp CTTCEEEEECCSSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHTTS--------SSEEEEEECCTTCHHHHHHHHHT
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC-C-CEEEEEECCHHHHHHHHHHh--------cCCeeEEEcCCCCHHHHHHHHHh
Confidence 356889999987554 34555553 4 58999999988776665433 24778888886432 222
Q ss_pred CCCceeEEEEcCC
Q 025141 172 RKESYDVIIGDLA 184 (257)
Q Consensus 172 ~~~~fDvIi~D~~ 184 (257)
. ++.|+++.++.
T Consensus 84 ~-~~iD~lv~nAg 95 (291)
T 3rd5_A 84 V-SGADVLINNAG 95 (291)
T ss_dssp C-CCEEEEEECCC
T ss_pred c-CCCCEEEECCc
Confidence 2 57899999875
No 478
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=83.50 E-value=3.2 Score=36.83 Aligned_cols=34 Identities=15% Similarity=0.316 Sum_probs=24.2
Q ss_pred CCCeEEEEeccchH-H-HHHHHhcCCCcEEEEEECCH
Q 025141 102 NPKTIFIMGGGEGS-T-AREILRHKTVEKVVMCDIDE 136 (257)
Q Consensus 102 ~~~~VL~IG~G~G~-~-~~~l~~~~~~~~v~~VEid~ 136 (257)
..++||++|+|+-+ . +..|++ .++.+++.+|-|.
T Consensus 117 ~~~~VlvvG~GglGs~va~~La~-aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 117 KNAKVVILGCGGIGNHVSVILAT-SGIGEIILIDNDQ 152 (353)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHH-HTCSEEEEEECCB
T ss_pred hCCeEEEECCCHHHHHHHHHHHh-CCCCeEEEECCCc
Confidence 46899999996433 2 334444 5788999999874
No 479
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=83.43 E-value=2.5 Score=35.61 Aligned_cols=78 Identities=14% Similarity=0.184 Sum_probs=51.4
Q ss_pred CCCCCeEEEEeccchH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hh
Q 025141 100 HPNPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LE 170 (257)
Q Consensus 100 ~~~~~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~------l~ 170 (257)
.-+.+.+|+.|+++|. +++.+++. + .+|.+++.+++-.+...+.+... .+++.++..|..+. ++
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~-G-~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~d~~~v~~~~~ 95 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVA-G-ARILINGTDPSRVAQTVQEFRNV-----GHDAEAVAFDVTSESEIIEAFA 95 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHT-T-CEEEECCSCHHHHHHHHHHHHHT-----TCCEEECCCCTTCHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHHHhc-----CCceEEEEcCCCCHHHHHHHHH
Confidence 3467889999887654 45555554 4 58999999988777665554322 35677777776432 11
Q ss_pred ---cCCCceeEEEEcCC
Q 025141 171 ---SRKESYDVIIGDLA 184 (257)
Q Consensus 171 ---~~~~~fDvIi~D~~ 184 (257)
...++.|+++.++.
T Consensus 96 ~~~~~~g~iD~lv~nAg 112 (271)
T 4ibo_A 96 RLDEQGIDVDILVNNAG 112 (271)
T ss_dssp HHHHHTCCCCEEEECCC
T ss_pred HHHHHCCCCCEEEECCC
Confidence 22357999999875
No 480
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=83.38 E-value=3.2 Score=34.62 Aligned_cols=89 Identities=17% Similarity=0.160 Sum_probs=53.5
Q ss_pred CeEEEEeccchH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025141 104 KTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (257)
Q Consensus 104 ~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~ 181 (257)
.+|.+||+|.=+ ++..+.+. +...|+++|.+++..+...+.+. +.. ..|..+.+ +..|+|++
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~-g~~~v~~~~~~~~~~~~~~~~~g----------~~~-~~~~~~~~----~~~Dvvi~ 74 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRK-GFRIVQVYSRTEESARELAQKVE----------AEY-TTDLAEVN----PYAKLYIV 74 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSHHHHHHHHHHTT----------CEE-ESCGGGSC----SCCSEEEE
T ss_pred CeEEEEcCCHHHHHHHHHHHHC-CCeEEEEEeCCHHHHHHHHHHcC----------Cce-eCCHHHHh----cCCCEEEE
Confidence 579999997422 44555554 33348999999988776655332 111 22322222 35799988
Q ss_pred cCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 182 D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
-.++. . ..+.++. +.+.++++.+++-.
T Consensus 75 av~~~-------~--~~~v~~~-l~~~~~~~~ivv~~ 101 (266)
T 3d1l_A 75 SLKDS-------A--FAELLQG-IVEGKREEALMVHT 101 (266)
T ss_dssp CCCHH-------H--HHHHHHH-HHTTCCTTCEEEEC
T ss_pred ecCHH-------H--HHHHHHH-HHhhcCCCcEEEEC
Confidence 76421 1 2566777 67778777766543
No 481
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=83.33 E-value=5.3 Score=33.58 Aligned_cols=76 Identities=18% Similarity=0.246 Sum_probs=50.0
Q ss_pred CCCeEEEEeccchH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hhc-
Q 025141 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LES- 171 (257)
Q Consensus 102 ~~~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~------l~~- 171 (257)
+.+.||+.|+++|. +++.+++. + .+|.+++.+++-.+...+.+... ..++.++..|..+. ++.
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~-G-~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~ 95 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAAR-G-IAVYGCARDAKNVSAAVDGLRAA-----GHDVDGSSCDVTSTDEVHAAVAAA 95 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHTT-----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEECCCCCHHHHHHHHHHH
Confidence 45789999987654 45555554 4 58999999988777666554322 35788888886432 211
Q ss_pred --CCCceeEEEEcCC
Q 025141 172 --RKESYDVIIGDLA 184 (257)
Q Consensus 172 --~~~~fDvIi~D~~ 184 (257)
.-++.|+++.++.
T Consensus 96 ~~~~g~id~lv~nAg 110 (279)
T 3sju_A 96 VERFGPIGILVNSAG 110 (279)
T ss_dssp HHHHCSCCEEEECCC
T ss_pred HHHcCCCcEEEECCC
Confidence 2257899999875
No 482
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=83.12 E-value=4.3 Score=33.66 Aligned_cols=77 Identities=14% Similarity=0.176 Sum_probs=51.6
Q ss_pred CCCCeEEEEeccchH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hh-
Q 025141 101 PNPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LE- 170 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~------l~- 170 (257)
.+.+.+|+.|+++|. +++.+++. + .+|.+++.+++-.+...+.+... ..++.++..|..+. ++
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~ 82 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKA-G-ASVVVTDLKSEGAEAVAAAIRQA-----GGKAIGLECNVTDEQHREAVIKA 82 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHH-T-CEEEEEESSHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEECCCCCHHHHHHHHHH
Confidence 356789999887664 45555554 3 58999999998777666554422 35788888776442 21
Q ss_pred --cCCCceeEEEEcCC
Q 025141 171 --SRKESYDVIIGDLA 184 (257)
Q Consensus 171 --~~~~~fDvIi~D~~ 184 (257)
+.-++.|+++.++.
T Consensus 83 ~~~~~g~id~lv~nAg 98 (256)
T 3gaf_A 83 ALDQFGKITVLVNNAG 98 (256)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHHcCCCCEEEECCC
Confidence 11257899999875
No 483
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=83.10 E-value=1.6 Score=37.76 Aligned_cols=89 Identities=17% Similarity=0.331 Sum_probs=54.6
Q ss_pred eEEEEec--cchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEE-cch-HHHHhc-CCCceeEE
Q 025141 105 TIFIMGG--GEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVI-NDA-RAELES-RKESYDVI 179 (257)
Q Consensus 105 ~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~-~Da-~~~l~~-~~~~fDvI 179 (257)
+||++|+ |.|..+.++++..+ .+|++++.+++-.+.+++. .. + .++. .|. .+.++. ....+|+|
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~~~~~~~~~~~l-Ga------~---~v~~~~~~~~~~~~~~~~~~~d~v 221 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRG-YDVVASTGNREAADYLKQL-GA------S---EVISREDVYDGTLKALSKQQWQGA 221 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHT-CCEEEEESSSSTHHHHHHH-TC------S---EEEEHHHHCSSCCCSSCCCCEEEE
T ss_pred eEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc-CC------c---EEEECCCchHHHHHHhhcCCccEE
Confidence 8999996 55666777777655 4799999988878888763 21 1 1111 110 011121 23469998
Q ss_pred EEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEe
Q 025141 180 IGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQ 218 (257)
Q Consensus 180 i~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~ 218 (257)
+-... . +.+.. +.+.|+++|.++.-
T Consensus 222 id~~g-----~--------~~~~~-~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 222 VDPVG-----G--------KQLAS-LLSKIQYGGSVAVS 246 (330)
T ss_dssp EESCC-----T--------HHHHH-HHTTEEEEEEEEEC
T ss_pred EECCc-----H--------HHHHH-HHHhhcCCCEEEEE
Confidence 75431 1 13455 57889999998864
No 484
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=82.98 E-value=9.4 Score=31.56 Aligned_cols=77 Identities=17% Similarity=0.196 Sum_probs=50.6
Q ss_pred CCCeEEEEeccchH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hh--
Q 025141 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LE-- 170 (257)
Q Consensus 102 ~~~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~------l~-- 170 (257)
+.+.||+.|+++|. +++++++. + .+|.+++.+++-.+...+.+... ..++.++..|..+. ++
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~ 100 (262)
T 3rkr_A 28 SGQVAVVTGASRGIGAAIARKLGSL-G-ARVVLTARDVEKLRAVEREIVAA-----GGEAESHACDLSHSDAIAAFATGV 100 (262)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHT-----TCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-C-CEEEEEECCHHHHHHHHHHHHHh-----CCceeEEEecCCCHHHHHHHHHHH
Confidence 45789998886553 34555553 4 58999999998877666555422 35778888886432 11
Q ss_pred -cCCCceeEEEEcCCC
Q 025141 171 -SRKESYDVIIGDLAD 185 (257)
Q Consensus 171 -~~~~~fDvIi~D~~~ 185 (257)
...++.|+++..+..
T Consensus 101 ~~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 101 LAAHGRCDVLVNNAGV 116 (262)
T ss_dssp HHHHSCCSEEEECCCC
T ss_pred HHhcCCCCEEEECCCc
Confidence 122578999998753
No 485
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=82.91 E-value=7.4 Score=33.64 Aligned_cols=92 Identities=16% Similarity=0.165 Sum_probs=56.8
Q ss_pred CCeEEEEeccchHHHHHHHhc---CCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHH--HHhcC-CCce
Q 025141 103 PKTIFIMGGGEGSTAREILRH---KTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA--ELESR-KESY 176 (257)
Q Consensus 103 ~~~VL~IG~G~G~~~~~l~~~---~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~--~l~~~-~~~f 176 (257)
.++++++|+| ..++.+++. .+ . |+++|.|++.++ +++ ..+.++.+|+.+ .+++. -++.
T Consensus 115 ~~~viI~G~G--~~g~~l~~~L~~~g-~-v~vid~~~~~~~-~~~-----------~~~~~i~gd~~~~~~L~~a~i~~a 178 (336)
T 1lnq_A 115 SRHVVICGWS--ESTLECLRELRGSE-V-FVLAEDENVRKK-VLR-----------SGANFVHGDPTRVSDLEKANVRGA 178 (336)
T ss_dssp -CEEEEESCC--HHHHHHHTTGGGSC-E-EEEESCGGGHHH-HHH-----------TTCEEEESCTTSHHHHHHTCSTTE
T ss_pred cCCEEEECCc--HHHHHHHHHHHhCC-c-EEEEeCChhhhh-HHh-----------CCcEEEEeCCCCHHHHHhcChhhc
Confidence 4579999974 555555442 23 4 999999999888 653 256788898854 34443 4789
Q ss_pred eEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecC
Q 025141 177 DVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAG 220 (257)
Q Consensus 177 DvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~ 220 (257)
|.|++...+.. . +..... ..+.+.|+..++....
T Consensus 179 ~~vi~~~~~d~-----~---n~~~~~--~ar~~~~~~~iiar~~ 212 (336)
T 1lnq_A 179 RAVIVDLESDS-----E---TIHCIL--GIRKIDESVRIIAEAE 212 (336)
T ss_dssp EEEEECCSSHH-----H---HHHHHH--HHHTTCTTSEEEEECS
T ss_pred cEEEEcCCccH-----H---HHHHHH--HHHHHCCCCeEEEEEC
Confidence 99998654311 1 112222 2456777766666543
No 486
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=82.91 E-value=6.9 Score=32.98 Aligned_cols=81 Identities=17% Similarity=0.243 Sum_probs=49.2
Q ss_pred CCCeEEEEeccchH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hhc-
Q 025141 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LES- 171 (257)
Q Consensus 102 ~~~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~------l~~- 171 (257)
+.++||+.|+++|. +++++++. + .+|++++.+++-.+...+.+..........++.++..|..+. ++.
T Consensus 17 ~~k~vlVTGasggIG~~la~~l~~~-G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 94 (303)
T 1yxm_A 17 QGQVAIVTGGATGIGKAIVKELLEL-G-SNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST 94 (303)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHH
Confidence 45789999986553 34455553 3 589999999877665544433210001235788888886432 111
Q ss_pred --CCCceeEEEEcCC
Q 025141 172 --RKESYDVIIGDLA 184 (257)
Q Consensus 172 --~~~~fDvIi~D~~ 184 (257)
.-++.|+||..+.
T Consensus 95 ~~~~g~id~li~~Ag 109 (303)
T 1yxm_A 95 LDTFGKINFLVNNGG 109 (303)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 1246899999875
No 487
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=82.84 E-value=3.9 Score=33.89 Aligned_cols=76 Identities=24% Similarity=0.318 Sum_probs=50.7
Q ss_pred CCCeEEEEeccchH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hhc-
Q 025141 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LES- 171 (257)
Q Consensus 102 ~~~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~------l~~- 171 (257)
+.+.+|+.|+++|. +++.+++. + .+|.+++.+++-.+.+.+.+.. ...++.++..|..+. ++.
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dv~~~~~v~~~~~~~ 77 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKE-G-ARVVITGRTKEKLEEAKLEIEQ-----FPGQILTVQMDVRNTDDIQKMIEQI 77 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHCC-----STTCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHHHh-----cCCcEEEEEccCCCHHHHHHHHHHH
Confidence 45788998887653 44555554 4 5899999999887776655432 135788888886432 211
Q ss_pred --CCCceeEEEEcCC
Q 025141 172 --RKESYDVIIGDLA 184 (257)
Q Consensus 172 --~~~~fDvIi~D~~ 184 (257)
.-++.|+++.++.
T Consensus 78 ~~~~g~id~lv~nAg 92 (257)
T 3imf_A 78 DEKFGRIDILINNAA 92 (257)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 1257899999875
No 488
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=82.74 E-value=6.4 Score=33.41 Aligned_cols=75 Identities=9% Similarity=0.072 Sum_probs=48.1
Q ss_pred CCCeEEEEeccch-----HHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hh
Q 025141 102 NPKTIFIMGGGEG-----STAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LE 170 (257)
Q Consensus 102 ~~~~VL~IG~G~G-----~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~------l~ 170 (257)
+.|.||+.|+++| .+++.+++. + .+|.+++.++...+.+++..... +++.++..|..+. ++
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~-G-~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~ 101 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREA-G-AELAFTYQGDALKKRVEPLAEEL------GAFVAGHCDVADAASIDAVFE 101 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHT-T-CEEEEEECSHHHHHHHHHHHHHH------TCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHC-C-CEEEEEcCCHHHHHHHHHHHHhc------CCceEEECCCCCHHHHHHHHH
Confidence 5688999998744 245566654 4 58999999976655555443322 3567777776432 21
Q ss_pred ---cCCCceeEEEEcCC
Q 025141 171 ---SRKESYDVIIGDLA 184 (257)
Q Consensus 171 ---~~~~~fDvIi~D~~ 184 (257)
+.-++.|+++.++.
T Consensus 102 ~~~~~~g~iD~lVnnAG 118 (293)
T 3grk_A 102 TLEKKWGKLDFLVHAIG 118 (293)
T ss_dssp HHHHHTSCCSEEEECCC
T ss_pred HHHHhcCCCCEEEECCc
Confidence 22357999999875
No 489
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=82.73 E-value=6.1 Score=32.36 Aligned_cols=76 Identities=14% Similarity=0.307 Sum_probs=47.8
Q ss_pred CCCeEEEEeccchH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hhc-
Q 025141 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LES- 171 (257)
Q Consensus 102 ~~~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~------l~~- 171 (257)
+.+.||+.|+++|. +++++++. + .+|.+++.++.-.+...+.+... ..++.++..|..+. ++.
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~-G-~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~D~~~~~~~~~~~~~~ 84 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEA-G-ARVIIADLDEAMATKAVEDLRME-----GHDVSSVVMDVTNTESVQNAVRSV 84 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHHHhc-----CCceEEEEecCCCHHHHHHHHHHH
Confidence 56789999886553 34455553 3 58999999987665444433221 24788888886432 111
Q ss_pred --CCCceeEEEEcCC
Q 025141 172 --RKESYDVIIGDLA 184 (257)
Q Consensus 172 --~~~~fDvIi~D~~ 184 (257)
..++.|+|+..+.
T Consensus 85 ~~~~~~id~vi~~Ag 99 (260)
T 3awd_A 85 HEQEGRVDILVACAG 99 (260)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 1246899999875
No 490
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=82.69 E-value=15 Score=30.81 Aligned_cols=76 Identities=17% Similarity=0.174 Sum_probs=51.0
Q ss_pred CCCeEEEEeccchH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hhc-
Q 025141 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LES- 171 (257)
Q Consensus 102 ~~~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~------l~~- 171 (257)
+.+.||+.|+++|. +++.+++. + .+|.+++.+++-.+...+.+... ..++.++..|..+. ++.
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~-G-~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~ 99 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAAD-G-VTVGALGRTRTEVEEVADEIVGA-----GGQAIALEADVSDELQMRNAVRDL 99 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHT-T-CEEEEEESSHHHHHHHHHHHTTT-----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEEccCCCHHHHHHHHHHH
Confidence 56789999987654 34555553 4 58999999988777666544322 35788888886442 211
Q ss_pred --CCCceeEEEEcCC
Q 025141 172 --RKESYDVIIGDLA 184 (257)
Q Consensus 172 --~~~~fDvIi~D~~ 184 (257)
.-++.|+++.++.
T Consensus 100 ~~~~g~iD~lVnnAg 114 (283)
T 3v8b_A 100 VLKFGHLDIVVANAG 114 (283)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHhCCCCEEEECCC
Confidence 2257999999875
No 491
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=82.68 E-value=6.1 Score=32.96 Aligned_cols=76 Identities=17% Similarity=0.268 Sum_probs=48.7
Q ss_pred CCCeEEEEeccchH---HHHHHHhcCCCcEEEEEECC------------HHHHHHHHhhhhhccCCCCCCCeEEEEcchH
Q 025141 102 NPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDID------------EEVVEFCKSYLVVNKEAFSDPRLELVINDAR 166 (257)
Q Consensus 102 ~~~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid------------~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~ 166 (257)
..+.||+.|+++|. +++.+++. + .+|.+++.+ ++-++...+.+... ..++.++..|..
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~ 84 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAAD-G-ADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI-----GSRIVARQADVR 84 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-T-CEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH-----TCCEEEEECCTT
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-C-CeEEEEecccccccccccccchHHHHHHHHHHHhc-----CCeEEEEeCCCC
Confidence 56889999987654 45555554 3 589999987 55555444433322 257888888864
Q ss_pred HH------Hhc---CCCceeEEEEcCC
Q 025141 167 AE------LES---RKESYDVIIGDLA 184 (257)
Q Consensus 167 ~~------l~~---~~~~fDvIi~D~~ 184 (257)
+. ++. .-++.|+++.++.
T Consensus 85 ~~~~v~~~~~~~~~~~g~id~lv~nAg 111 (278)
T 3sx2_A 85 DRESLSAALQAGLDELGRLDIVVANAG 111 (278)
T ss_dssp CHHHHHHHHHHHHHHHCCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 32 221 1257899999875
No 492
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=82.67 E-value=5.1 Score=33.12 Aligned_cols=80 Identities=13% Similarity=0.161 Sum_probs=51.9
Q ss_pred CCCCeEEEEeccchH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hh-
Q 025141 101 PNPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LE- 170 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~------l~- 170 (257)
...+.+|+.|+++|. +++.+++. + .+|.+++.+++-.+...+.+..... ...++.++..|..+. ++
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~ 80 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATD-G-YRVVLIARSKQNLEKVHDEIMRSNK--HVQEPIVLPLDITDCTKADTEIKD 80 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHH-T-CEEEEEESCHHHHHHHHHHHHHHCT--TSCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-C-CEEEEEECCHHHHHHHHHHHHHhcc--ccCcceEEeccCCCHHHHHHHHHH
Confidence 356789999987664 45555654 3 5899999999887766655432210 125677888776442 21
Q ss_pred --cCCCceeEEEEcCC
Q 025141 171 --SRKESYDVIIGDLA 184 (257)
Q Consensus 171 --~~~~~fDvIi~D~~ 184 (257)
..-++.|+++.++.
T Consensus 81 ~~~~~g~iD~lvnnAg 96 (250)
T 3nyw_A 81 IHQKYGAVDILVNAAA 96 (250)
T ss_dssp HHHHHCCEEEEEECCC
T ss_pred HHHhcCCCCEEEECCC
Confidence 12257999999875
No 493
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=82.61 E-value=7.6 Score=32.90 Aligned_cols=97 Identities=15% Similarity=0.091 Sum_probs=53.0
Q ss_pred CCeEEEEeccch--HHHHHHHhcC----CCcEEEEEECCHHHHHHHHh-h-hhhccCCCCC---CCeEEEEcchHHHHhc
Q 025141 103 PKTIFIMGGGEG--STAREILRHK----TVEKVVMCDIDEEVVEFCKS-Y-LVVNKEAFSD---PRLELVINDARAELES 171 (257)
Q Consensus 103 ~~~VL~IG~G~G--~~~~~l~~~~----~~~~v~~VEid~~vi~~a~~-~-~~~~~~~~~~---~rv~i~~~Da~~~l~~ 171 (257)
+.+|.+||+|.= .++..+++.+ +..+|++++. ++.++..++ . +..... ..+ .+++. ..+. +.+
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~~~~-~~~~~~~~~~~-~~~~-~~~-- 81 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRVVTP-SRDFLARPTCV-TDNP-AEV-- 81 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEEECS-SCEEEECCSEE-ESCH-HHH--
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhcCCeEEEeC-CCCeEEecceE-ecCc-ccc--
Confidence 358999999853 3445555430 2137999998 666665554 2 111100 000 01111 1221 222
Q ss_pred CCCceeEEEEcCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEE
Q 025141 172 RKESYDVIIGDLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVT 217 (257)
Q Consensus 172 ~~~~fDvIi~D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~ 217 (257)
+.+|+||+-.+.. . ..+.++. ++..|+++.+++.
T Consensus 82 --~~~D~vil~vk~~-------~--~~~v~~~-i~~~l~~~~~iv~ 115 (317)
T 2qyt_A 82 --GTVDYILFCTKDY-------D--MERGVAE-IRPMIGQNTKILP 115 (317)
T ss_dssp --CCEEEEEECCSSS-------C--HHHHHHH-HGGGEEEEEEEEE
T ss_pred --CCCCEEEEecCcc-------c--HHHHHHH-HHhhcCCCCEEEE
Confidence 4799999986532 1 3677787 6888888776654
No 494
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=82.56 E-value=4.3 Score=33.78 Aligned_cols=78 Identities=15% Similarity=0.201 Sum_probs=51.6
Q ss_pred CCCCeEEEEeccchH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hh-
Q 025141 101 PNPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LE- 170 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~------l~- 170 (257)
.+.|.||+.|+++|. +++.+++. + .+|.+++.+++-.+.+.+.+... ...++.++..|..+. ++
T Consensus 8 l~~k~vlVTGas~gIG~aia~~l~~~-G-~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dv~~~~~v~~~~~~ 81 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGRGIATVFARA-G-ANVAVAGRSTADIDACVADLDQL----GSGKVIGVQTDVSDRAQCDALAGR 81 (262)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHTT----SSSCEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHHHhh----CCCcEEEEEcCCCCHHHHHHHHHH
Confidence 356889998887654 44555554 4 58999999998877666554322 125788888887442 11
Q ss_pred --cCCCceeEEEEcCC
Q 025141 171 --SRKESYDVIIGDLA 184 (257)
Q Consensus 171 --~~~~~fDvIi~D~~ 184 (257)
+.-++.|+++.++.
T Consensus 82 ~~~~~g~id~lvnnAg 97 (262)
T 3pk0_A 82 AVEEFGGIDVVCANAG 97 (262)
T ss_dssp HHHHHSCCSEEEECCC
T ss_pred HHHHhCCCCEEEECCC
Confidence 11247999999875
No 495
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=82.49 E-value=1.4 Score=39.90 Aligned_cols=47 Identities=19% Similarity=0.326 Sum_probs=36.1
Q ss_pred CCCCCeEEEEeccchHHHHHHHhc-------CCCcEEEEEECCHHHHHHHHhhh
Q 025141 100 HPNPKTIFIMGGGEGSTAREILRH-------KTVEKVVMCDIDEEVVEFCKSYL 146 (257)
Q Consensus 100 ~~~~~~VL~IG~G~G~~~~~l~~~-------~~~~~v~~VEid~~vi~~a~~~~ 146 (257)
.|.+-+|+++|.|.|.++.-+++. ....++..||++|...+.=++.+
T Consensus 78 ~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L 131 (387)
T 1zkd_A 78 EPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLL 131 (387)
T ss_dssp CCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHS
T ss_pred CCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHh
Confidence 455568999999999998877652 12348999999999988666654
No 496
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=82.33 E-value=7.4 Score=31.76 Aligned_cols=73 Identities=18% Similarity=0.259 Sum_probs=48.7
Q ss_pred CCCCeEEEEeccchH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHH------HHhc
Q 025141 101 PNPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARA------ELES 171 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~------~l~~ 171 (257)
.+.++||+.|+++|. +++.+++. + .+|.+++.+++-++...+.+. .++.++..|..+ .++.
T Consensus 12 ~~~k~vlVTGas~gIG~~~a~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~--------~~~~~~~~D~~~~~~~~~~~~~ 81 (249)
T 3f9i_A 12 LTGKTSLITGASSGIGSAIARLLHKL-G-SKVIISGSNEEKLKSLGNALK--------DNYTIEVCNLANKEECSNLISK 81 (249)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHC--------SSEEEEECCTTSHHHHHHHHHT
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC-C-CEEEEEcCCHHHHHHHHHHhc--------cCccEEEcCCCCHHHHHHHHHh
Confidence 456889999987654 44555554 3 589999999887766554331 367777777643 2222
Q ss_pred CCCceeEEEEcCC
Q 025141 172 RKESYDVIIGDLA 184 (257)
Q Consensus 172 ~~~~fDvIi~D~~ 184 (257)
..+.|+++..+.
T Consensus 82 -~~~id~li~~Ag 93 (249)
T 3f9i_A 82 -TSNLDILVCNAG 93 (249)
T ss_dssp -CSCCSEEEECCC
T ss_pred -cCCCCEEEECCC
Confidence 257999999875
No 497
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=82.19 E-value=6.9 Score=34.02 Aligned_cols=75 Identities=11% Similarity=0.122 Sum_probs=47.2
Q ss_pred cCCCCCeEEEEeccchH--HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCce
Q 025141 99 HHPNPKTIFIMGGGEGS--TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESY 176 (257)
Q Consensus 99 ~~~~~~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~f 176 (257)
..++.+++++||+|.=+ .++.+....+..+|.+++.+ ..-+.++++-...+ -++... |..+.++ ..
T Consensus 117 a~~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~-~a~~la~~l~~~~g-----~~~~~~--~~~eav~----~a 184 (313)
T 3hdj_A 117 ARPRSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY-ASPEILERIGRRCG-----VPARMA--APADIAA----QA 184 (313)
T ss_dssp SCTTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT-CCHHHHHHHHHHHT-----SCEEEC--CHHHHHH----HC
T ss_pred ccCCCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc-HHHHHHHHHHHhcC-----CeEEEe--CHHHHHh----hC
Confidence 45678999999998533 33444443456899999999 55555555322111 123322 7766664 58
Q ss_pred eEEEEcCCC
Q 025141 177 DVIIGDLAD 185 (257)
Q Consensus 177 DvIi~D~~~ 185 (257)
|+|++-.+.
T Consensus 185 DIVi~aT~s 193 (313)
T 3hdj_A 185 DIVVTATRS 193 (313)
T ss_dssp SEEEECCCC
T ss_pred CEEEEccCC
Confidence 999987664
No 498
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=82.07 E-value=8.5 Score=31.77 Aligned_cols=74 Identities=22% Similarity=0.317 Sum_probs=48.6
Q ss_pred CCCCeEEEEeccchH---HHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHH------Hh-
Q 025141 101 PNPKTIFIMGGGEGS---TAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAE------LE- 170 (257)
Q Consensus 101 ~~~~~VL~IG~G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~------l~- 170 (257)
.+.+.||+.|+++|. +++.+++. + .+|.+++.+++-.+...+.+ .+++.++..|..+. ++
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~-G-~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~D~~~~~~v~~~~~~ 75 (259)
T 4e6p_A 6 LEGKSALITGSARGIGRAFAEAYVRE-G-ATVAIADIDIERARQAAAEI--------GPAAYAVQMDVTRQDSIDAAIAA 75 (259)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHH--------CTTEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-C-CEEEEEeCCHHHHHHHHHHh--------CCCceEEEeeCCCHHHHHHHHHH
Confidence 356889999987653 45555554 3 58999999988766554433 13567777776432 21
Q ss_pred --cCCCceeEEEEcCC
Q 025141 171 --SRKESYDVIIGDLA 184 (257)
Q Consensus 171 --~~~~~fDvIi~D~~ 184 (257)
+.-++.|+++..+.
T Consensus 76 ~~~~~g~id~lv~~Ag 91 (259)
T 4e6p_A 76 TVEHAGGLDILVNNAA 91 (259)
T ss_dssp HHHHSSSCCEEEECCC
T ss_pred HHHHcCCCCEEEECCC
Confidence 12357999999875
No 499
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=82.06 E-value=2.9 Score=38.90 Aligned_cols=75 Identities=17% Similarity=0.197 Sum_probs=44.7
Q ss_pred CCeEEEEeccc-hHHH---HHHHhcC--CCcEEEEEECCHHHHHHHHhhhhh--ccCCCCCCCeEEEE-cchHHHHhcCC
Q 025141 103 PKTIFIMGGGE-GSTA---REILRHK--TVEKVVMCDIDEEVVEFCKSYLVV--NKEAFSDPRLELVI-NDARAELESRK 173 (257)
Q Consensus 103 ~~~VL~IG~G~-G~~~---~~l~~~~--~~~~v~~VEid~~vi~~a~~~~~~--~~~~~~~~rv~i~~-~Da~~~l~~~~ 173 (257)
..+|.+||+|+ |... ..+++.. ...+|+.+|++++.++.+...... ... ....++.. .|..+-+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~---~~~~~I~~ttD~~eal---- 75 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEV---GADLKFEKTMNLDDVI---- 75 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHT---TCCCEEEEESCHHHHH----
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccC---CCCcEEEEECCHHHHh----
Confidence 35899999999 5332 2444321 136899999999987775554321 111 11334443 5654444
Q ss_pred CceeEEEEcCC
Q 025141 174 ESYDVIIGDLA 184 (257)
Q Consensus 174 ~~fDvIi~D~~ 184 (257)
..-|+|++...
T Consensus 76 ~dAD~VIiaag 86 (480)
T 1obb_A 76 IDADFVINTAM 86 (480)
T ss_dssp TTCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 34699998874
No 500
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=81.90 E-value=9.2 Score=34.00 Aligned_cols=118 Identities=8% Similarity=0.117 Sum_probs=71.6
Q ss_pred CCCeEEEEeccchHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhhhhccCCCCCCCeEEEEcchHHHHhcCCCceeEEEE
Q 025141 102 NPKTIFIMGGGEGSTAREILRHKTVEKVVMCDIDEEVVEFCKSYLVVNKEAFSDPRLELVINDARAELESRKESYDVIIG 181 (257)
Q Consensus 102 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a~~~~~~~~~~~~~~rv~i~~~Da~~~l~~~~~~fDvIi~ 181 (257)
...+||+|+-+-|.++..++.+ .++.+.=+-..-...+.++..++ +...++++... ++.....||+|++
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~----~~~~~~ds~~~~~~~~~n~~~~~--~~~~~~~~~~~-----~~~~~~~~~~v~~ 106 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH----KPYSIGDSYISELATRENLRLNG--IDESSVKFLDS-----TADYPQQPGVVLI 106 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG----CCEEEESCHHHHHHHHHHHHHTT--CCGGGSEEEET-----TSCCCSSCSEEEE
T ss_pred CCCCEEEECCCCCHHHHhhccC----CceEEEhHHHHHHHHHHHHHHcC--CCccceEeccc-----ccccccCCCEEEE
Confidence 3468999999999999888764 23445323333345666666543 23344665433 2344678999999
Q ss_pred cCCCCCCCCcccCCchHHHHHHHHcCcCCCCcEEEEecCCCCCCCChHHHHHHHHHHhhhCCc
Q 025141 182 DLADPIEGGPCYKLYTKSFYEFVVKPRLNPEGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKC 244 (257)
Q Consensus 182 D~~~~~~~~p~~~L~t~ef~~~~~~~~L~pgGil~~~~~~~~~~~~~~~~~~~~~~l~~~F~~ 244 (257)
-.+... .. ...-++. +...|+|++.+++-... .....++.+.|.+.+..
T Consensus 107 ~lpk~~------~~-l~~~L~~-l~~~l~~~~~i~~~g~~------~~~~~~~~~~l~~~~~~ 155 (375)
T 4dcm_A 107 KVPKTL------AL-LEQQLRA-LRKVVTSDTRIIAGAKA------RDIHTSTLELFEKVLGP 155 (375)
T ss_dssp ECCSCH------HH-HHHHHHH-HHTTCCTTSEEEEEEEG------GGCCHHHHHHHHHHTCC
T ss_pred EcCCCH------HH-HHHHHHH-HHhhCCCCCEEEEEecc------cchHHHHHHHHHhhcCc
Confidence 876321 11 2455666 68899999988764321 11224555666665554
Done!