Query 025144
Match_columns 257
No_of_seqs 184 out of 2207
Neff 10.5
Searched_HMMs 29240
Date Mon Mar 25 04:35:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025144.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025144hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gek_A TRNA (CMO5U34)-methyltr 100.0 1.7E-26 5.7E-31 182.7 22.9 184 67-257 68-256 (261)
2 3dtn_A Putative methyltransfer 99.9 2.5E-26 8.5E-31 179.5 19.1 210 29-248 4-217 (234)
3 3dlc_A Putative S-adenosyl-L-m 99.9 2E-25 7E-30 172.3 17.1 182 54-252 29-210 (219)
4 3hnr_A Probable methyltransfer 99.9 2.6E-25 8.9E-30 172.1 16.9 192 29-245 3-201 (220)
5 3dh0_A SAM dependent methyltra 99.9 4.9E-24 1.7E-28 164.8 19.2 165 59-256 27-191 (219)
6 3bus_A REBM, methyltransferase 99.9 8.8E-24 3E-28 168.8 21.0 196 28-246 6-217 (273)
7 3h2b_A SAM-dependent methyltra 99.9 2E-25 6.7E-30 170.7 9.9 187 28-253 2-190 (203)
8 2o57_A Putative sarcosine dime 99.9 1.3E-23 4.4E-28 169.8 20.3 195 28-246 20-235 (297)
9 3l8d_A Methyltransferase; stru 99.9 4.3E-24 1.5E-28 167.6 15.6 188 27-245 12-200 (242)
10 3kkz_A Uncharacterized protein 99.9 2E-23 6.8E-28 166.2 17.4 185 35-247 13-198 (267)
11 3ou2_A SAM-dependent methyltra 99.9 3.7E-23 1.2E-27 159.6 18.1 197 28-246 8-206 (218)
12 1vl5_A Unknown conserved prote 99.9 1.8E-23 6.2E-28 165.8 16.8 163 60-245 28-190 (260)
13 3f4k_A Putative methyltransfer 99.9 7.2E-23 2.5E-27 162.0 18.3 162 61-248 37-199 (257)
14 1xxl_A YCGJ protein; structura 99.9 5.6E-23 1.9E-27 161.0 17.1 166 57-245 9-174 (239)
15 3ujc_A Phosphoethanolamine N-m 99.9 8.1E-23 2.8E-27 162.4 17.7 162 57-246 43-207 (266)
16 4htf_A S-adenosylmethionine-de 99.9 2.7E-23 9.2E-28 167.0 14.3 203 29-245 24-232 (285)
17 3hem_A Cyclopropane-fatty-acyl 99.9 5.5E-22 1.9E-26 160.7 21.4 196 27-247 16-245 (302)
18 1nkv_A Hypothetical protein YJ 99.9 1.2E-22 4.1E-27 160.6 16.7 164 56-244 23-186 (256)
19 3pfg_A N-methyltransferase; N, 99.9 3.7E-23 1.3E-27 164.3 13.6 212 31-257 10-248 (263)
20 4fsd_A Arsenic methyltransfera 99.9 9.8E-23 3.4E-27 170.1 16.5 200 26-244 20-250 (383)
21 2p7i_A Hypothetical protein; p 99.9 7.6E-23 2.6E-27 160.9 14.9 190 31-245 9-199 (250)
22 1y8c_A S-adenosylmethionine-de 99.9 1E-22 3.5E-27 159.9 15.5 137 34-180 2-144 (246)
23 3vc1_A Geranyl diphosphate 2-C 99.9 4.6E-22 1.6E-26 161.8 19.4 163 59-246 106-270 (312)
24 3ocj_A Putative exported prote 99.9 5.3E-23 1.8E-27 166.8 13.7 178 66-257 115-303 (305)
25 2p35_A Trans-aconitate 2-methy 99.9 4.3E-22 1.5E-26 157.7 18.4 162 60-240 24-185 (259)
26 3g5l_A Putative S-adenosylmeth 99.9 2.4E-22 8.3E-27 158.7 16.8 114 59-180 34-147 (253)
27 1kpg_A CFA synthase;, cyclopro 99.9 1.3E-21 4.6E-26 157.2 21.2 194 27-245 8-228 (287)
28 3ege_A Putative methyltransfer 99.9 1.1E-22 3.6E-27 161.5 14.2 172 34-245 4-178 (261)
29 3mgg_A Methyltransferase; NYSG 99.9 2.4E-22 8.1E-27 160.7 16.2 172 56-245 24-198 (276)
30 2yqz_A Hypothetical protein TT 99.9 5.7E-22 1.9E-26 157.3 18.3 188 32-243 2-194 (263)
31 3bkw_A MLL3908 protein, S-aden 99.9 5.4E-22 1.9E-26 155.6 17.3 203 33-245 5-214 (243)
32 3e8s_A Putative SAM dependent 99.9 2.9E-23 9.8E-28 161.1 9.7 196 27-245 9-209 (227)
33 3e23_A Uncharacterized protein 99.9 1.9E-22 6.6E-27 154.9 14.0 171 27-245 9-182 (211)
34 3gwz_A MMCR; methyltransferase 99.9 5.1E-21 1.7E-25 159.1 23.6 175 59-257 192-368 (369)
35 1xtp_A LMAJ004091AAA; SGPP, st 99.9 1.6E-22 5.5E-27 159.7 13.4 156 57-245 81-238 (254)
36 3ccf_A Cyclopropane-fatty-acyl 99.9 8.4E-22 2.9E-26 157.8 16.3 162 60-245 48-210 (279)
37 2ex4_A Adrenal gland protein A 99.9 1.1E-22 3.8E-27 159.5 10.6 146 68-245 78-225 (241)
38 2gs9_A Hypothetical protein TT 99.9 2.1E-21 7.2E-26 149.1 16.5 135 33-183 1-137 (211)
39 3bxo_A N,N-dimethyltransferase 99.9 1.6E-21 5.5E-26 152.5 16.0 210 33-257 2-238 (239)
40 2fk8_A Methoxy mycolic acid sy 99.9 2.4E-21 8.2E-26 158.0 17.2 163 58-245 79-254 (318)
41 3dp7_A SAM-dependent methyltra 99.9 6.9E-21 2.4E-25 157.9 19.5 172 68-256 178-353 (363)
42 2r3s_A Uncharacterized protein 99.9 1.1E-20 3.9E-25 155.1 20.2 175 60-255 154-332 (335)
43 4a6d_A Hydroxyindole O-methylt 99.9 1.1E-20 3.8E-25 156.0 20.1 174 60-257 170-345 (353)
44 3i9f_A Putative type 11 methyl 99.9 6.9E-22 2.3E-26 146.7 11.6 147 65-256 13-159 (170)
45 2ip2_A Probable phenazine-spec 99.9 2.3E-20 7.8E-25 153.3 21.7 174 59-257 158-333 (334)
46 3gu3_A Methyltransferase; alph 99.9 2.6E-21 8.8E-26 155.3 15.7 112 64-180 17-128 (284)
47 4hg2_A Methyltransferase type 99.9 4.4E-22 1.5E-26 156.8 10.9 133 32-183 8-140 (257)
48 3bkx_A SAM-dependent methyltra 99.9 1.4E-20 4.9E-25 150.3 19.8 178 57-245 31-219 (275)
49 3i53_A O-methyltransferase; CO 99.9 1.1E-20 3.8E-25 155.0 19.5 164 66-257 166-331 (332)
50 3mcz_A O-methyltransferase; ad 99.9 6.3E-21 2.2E-25 157.7 17.8 174 62-257 171-348 (352)
51 1x19_A CRTF-related protein; m 99.9 2.5E-20 8.4E-25 154.5 21.3 177 59-257 180-358 (359)
52 1ri5_A MRNA capping enzyme; me 99.9 6.8E-21 2.3E-25 153.8 17.2 214 26-245 18-250 (298)
53 1vlm_A SAM-dependent methyltra 99.9 1E-20 3.5E-25 146.2 17.4 178 30-246 12-189 (219)
54 3dli_A Methyltransferase; PSI- 99.9 3.2E-21 1.1E-25 151.1 14.2 144 66-246 38-185 (240)
55 3sm3_A SAM-dependent methyltra 99.9 2.1E-21 7.4E-26 151.3 12.8 173 68-245 29-207 (235)
56 3lcc_A Putative methyl chlorid 99.9 2.2E-21 7.7E-26 151.5 12.3 141 70-247 67-209 (235)
57 3d2l_A SAM-dependent methyltra 99.9 1.4E-20 4.7E-25 147.6 16.5 132 34-179 3-138 (243)
58 2aot_A HMT, histamine N-methyl 99.9 5.5E-21 1.9E-25 154.0 14.1 155 68-242 51-218 (292)
59 1pjz_A Thiopurine S-methyltran 99.9 1.9E-21 6.4E-26 148.5 10.2 148 64-245 17-176 (203)
60 3lst_A CALO1 methyltransferase 99.8 5.5E-20 1.9E-24 151.7 18.3 168 60-256 175-346 (348)
61 3jwh_A HEN1; methyltransferase 99.8 1.9E-20 6.4E-25 144.5 14.6 120 58-178 18-141 (217)
62 3g2m_A PCZA361.24; SAM-depende 99.8 1.1E-20 3.8E-25 152.8 13.6 208 31-246 47-275 (299)
63 2a14_A Indolethylamine N-methy 99.8 1.2E-20 4.2E-25 149.7 13.6 153 66-246 52-239 (263)
64 3reo_A (ISO)eugenol O-methyltr 99.8 1.5E-19 5.2E-24 150.0 20.1 157 67-252 201-362 (368)
65 1qzz_A RDMB, aclacinomycin-10- 99.8 1.1E-19 3.9E-24 151.3 19.4 173 61-256 174-354 (374)
66 3jwg_A HEN1, methyltransferase 99.8 2.2E-20 7.4E-25 144.3 13.9 117 60-177 20-140 (219)
67 1ve3_A Hypothetical protein PH 99.8 7.5E-20 2.5E-24 141.9 16.9 117 55-180 26-144 (227)
68 2zfu_A Nucleomethylin, cerebra 99.8 5.6E-20 1.9E-24 141.6 15.3 166 27-257 21-190 (215)
69 4e2x_A TCAB9; kijanose, tetron 99.8 7.3E-22 2.5E-26 166.8 5.0 172 55-256 93-266 (416)
70 1wzn_A SAM-dependent methyltra 99.8 2.8E-20 9.6E-25 146.7 13.6 139 33-179 3-146 (252)
71 3p9c_A Caffeic acid O-methyltr 99.8 3.4E-19 1.2E-23 147.6 20.1 165 62-256 193-363 (364)
72 1tw3_A COMT, carminomycin 4-O- 99.8 3.2E-19 1.1E-23 147.9 19.5 174 61-257 175-355 (360)
73 2gb4_A Thiopurine S-methyltran 99.8 6.6E-20 2.3E-24 144.1 14.4 155 57-245 56-227 (252)
74 3cgg_A SAM-dependent methyltra 99.8 2.2E-19 7.5E-24 135.8 16.5 129 67-245 44-175 (195)
75 1fp1_D Isoliquiritigenin 2'-O- 99.8 1.6E-19 5.6E-24 150.2 17.1 167 61-257 200-372 (372)
76 2p8j_A S-adenosylmethionine-de 99.8 7.5E-20 2.6E-24 140.1 13.9 157 66-243 20-181 (209)
77 3g5t_A Trans-aconitate 3-methy 99.8 1.8E-19 6E-24 145.7 16.2 111 67-180 34-151 (299)
78 2xvm_A Tellurite resistance pr 99.8 4E-20 1.4E-24 140.5 11.7 148 61-245 24-173 (199)
79 3thr_A Glycine N-methyltransfe 99.8 7.1E-20 2.4E-24 147.6 12.9 125 53-180 41-177 (293)
80 2qe6_A Uncharacterized protein 99.8 9.8E-19 3.4E-23 139.2 19.2 148 67-241 75-238 (274)
81 1fp2_A Isoflavone O-methyltran 99.8 3.6E-19 1.2E-23 147.1 17.3 159 67-257 186-352 (352)
82 2g72_A Phenylethanolamine N-me 99.8 3.1E-20 1.1E-24 149.4 10.1 151 68-246 70-257 (289)
83 3ofk_A Nodulation protein S; N 99.8 1.6E-19 5.5E-24 139.0 13.7 116 56-180 38-156 (216)
84 3cc8_A Putative methyltransfer 99.8 3.4E-19 1.2E-23 138.3 15.5 160 61-246 25-186 (230)
85 2i62_A Nicotinamide N-methyltr 99.8 5.7E-20 1.9E-24 145.9 11.0 153 66-246 53-240 (265)
86 3ggd_A SAM-dependent methyltra 99.8 3E-19 1E-23 140.2 14.5 159 66-245 53-219 (245)
87 2avn_A Ubiquinone/menaquinone 99.8 3.4E-19 1.2E-23 141.2 13.8 142 26-181 12-155 (260)
88 2kw5_A SLR1183 protein; struct 99.8 1.7E-19 5.8E-24 137.5 11.3 143 68-245 29-171 (202)
89 2b3t_A Protein methyltransfera 99.8 1.6E-18 5.6E-23 138.4 16.8 156 54-257 95-275 (276)
90 4df3_A Fibrillarin-like rRNA/T 99.8 1E-18 3.5E-23 134.4 14.6 108 64-178 72-182 (233)
91 1xdz_A Methyltransferase GIDB; 99.8 1.4E-18 4.8E-23 136.0 15.7 103 68-178 69-174 (240)
92 3g07_A 7SK snRNA methylphospha 99.8 1.3E-19 4.5E-24 145.9 9.9 156 69-245 46-269 (292)
93 3orh_A Guanidinoacetate N-meth 99.8 9.6E-21 3.3E-25 147.9 3.1 145 26-177 11-169 (236)
94 3e05_A Precorrin-6Y C5,15-meth 99.8 8.2E-18 2.8E-22 128.4 19.0 118 55-179 26-143 (204)
95 1zx0_A Guanidinoacetate N-meth 99.8 6.7E-20 2.3E-24 143.2 7.3 147 26-179 11-171 (236)
96 1zg3_A Isoflavanone 4'-O-methy 99.8 2.5E-18 8.7E-23 142.3 15.7 159 68-257 192-358 (358)
97 3fpf_A Mtnas, putative unchara 99.8 5.9E-18 2E-22 134.1 16.8 108 63-179 116-223 (298)
98 2pxx_A Uncharacterized protein 99.8 3.8E-18 1.3E-22 131.0 14.9 116 57-181 32-162 (215)
99 1fbn_A MJ fibrillarin homologu 99.8 6.6E-18 2.3E-22 131.3 16.0 150 63-256 68-226 (230)
100 3iv6_A Putative Zn-dependent a 99.8 4.5E-18 1.5E-22 133.5 14.6 136 29-180 8-150 (261)
101 1jsx_A Glucose-inhibited divis 99.8 4.7E-18 1.6E-22 129.9 13.9 101 69-178 65-165 (207)
102 3m70_A Tellurite resistance pr 99.8 1.1E-18 3.8E-23 140.1 10.5 140 68-245 119-260 (286)
103 4dzr_A Protein-(glutamine-N5) 99.8 5E-19 1.7E-23 135.9 8.1 157 54-257 14-204 (215)
104 3grz_A L11 mtase, ribosomal pr 99.8 1.1E-17 3.8E-22 127.7 15.3 135 67-253 58-192 (205)
105 3g89_A Ribosomal RNA small sub 99.8 1.1E-17 3.7E-22 131.4 15.1 171 28-245 33-212 (249)
106 3q87_B N6 adenine specific DNA 99.8 1.2E-17 4.1E-22 123.7 14.3 129 68-255 22-159 (170)
107 3m33_A Uncharacterized protein 99.8 1E-18 3.5E-23 135.5 8.5 119 68-245 47-167 (226)
108 3hm2_A Precorrin-6Y C5,15-meth 99.8 8.3E-18 2.8E-22 125.4 13.1 119 54-180 10-129 (178)
109 3evz_A Methyltransferase; NYSG 99.8 4.9E-17 1.7E-21 126.3 17.9 133 66-244 52-205 (230)
110 3njr_A Precorrin-6Y methylase; 99.8 4E-17 1.4E-21 124.5 17.0 114 56-179 42-155 (204)
111 3mq2_A 16S rRNA methyltransfer 99.8 9.2E-18 3.2E-22 129.4 12.8 112 65-178 23-140 (218)
112 1dus_A MJ0882; hypothetical pr 99.8 6.2E-18 2.1E-22 127.7 11.6 119 56-181 39-160 (194)
113 3r0q_C Probable protein argini 99.8 9.3E-18 3.2E-22 139.5 13.1 146 27-178 21-169 (376)
114 1yzh_A TRNA (guanine-N(7)-)-me 99.7 4.6E-17 1.6E-21 125.1 15.4 107 68-178 40-156 (214)
115 3giw_A Protein of unknown func 99.7 2.5E-17 8.7E-22 129.0 13.7 159 59-241 67-243 (277)
116 3eey_A Putative rRNA methylase 99.7 1.3E-17 4.4E-22 126.5 11.8 114 66-181 19-142 (197)
117 3mti_A RRNA methylase; SAM-dep 99.7 1.5E-17 5.2E-22 124.9 12.0 108 67-180 20-137 (185)
118 3id6_C Fibrillarin-like rRNA/T 99.7 1E-16 3.5E-21 123.7 16.8 106 65-178 72-181 (232)
119 1nt2_A Fibrillarin-like PRE-rR 99.7 8.2E-17 2.8E-21 123.2 16.0 105 65-178 53-161 (210)
120 2fyt_A Protein arginine N-meth 99.7 2.4E-17 8.4E-22 135.2 13.5 118 53-175 48-168 (340)
121 3htx_A HEN1; HEN1, small RNA m 99.7 3.4E-17 1.2E-21 144.1 14.3 127 54-181 706-837 (950)
122 3p2e_A 16S rRNA methylase; met 99.7 2.3E-17 7.8E-22 127.6 11.8 154 68-246 23-186 (225)
123 3mb5_A SAM-dependent methyltra 99.7 5.8E-17 2E-21 127.9 14.0 113 58-178 82-194 (255)
124 1yb2_A Hypothetical protein TA 99.7 2.4E-17 8.1E-22 131.6 11.7 111 60-179 101-212 (275)
125 3q7e_A Protein arginine N-meth 99.7 2.5E-17 8.7E-22 135.6 11.9 118 54-176 51-171 (349)
126 2vdw_A Vaccinia virus capping 99.7 1.3E-17 4.5E-22 134.4 9.9 111 68-180 47-171 (302)
127 1g8a_A Fibrillarin-like PRE-rR 99.7 2.4E-16 8.3E-21 122.2 16.5 104 66-177 70-177 (227)
128 2ipx_A RRNA 2'-O-methyltransfe 99.7 4.6E-17 1.6E-21 126.8 12.2 108 64-178 72-182 (233)
129 3p9n_A Possible methyltransfer 99.7 5.1E-17 1.8E-21 122.4 12.1 109 68-181 43-156 (189)
130 3lpm_A Putative methyltransfer 99.7 9.4E-17 3.2E-21 127.0 14.1 139 61-245 40-201 (259)
131 2pwy_A TRNA (adenine-N(1)-)-me 99.7 1E-16 3.4E-21 126.7 14.2 113 59-179 86-199 (258)
132 2fca_A TRNA (guanine-N(7)-)-me 99.7 6.6E-17 2.2E-21 124.1 12.7 107 68-178 37-153 (213)
133 3u81_A Catechol O-methyltransf 99.7 4.7E-17 1.6E-21 125.7 11.6 147 29-183 23-175 (221)
134 2nxc_A L11 mtase, ribosomal pr 99.7 1.3E-16 4.5E-21 125.7 14.3 137 67-257 118-254 (254)
135 2y1w_A Histone-arginine methyl 99.7 9.7E-17 3.3E-21 132.1 14.0 144 28-177 9-154 (348)
136 3bwc_A Spermidine synthase; SA 99.7 1.6E-16 5.5E-21 128.3 13.7 152 68-257 94-257 (304)
137 1l3i_A Precorrin-6Y methyltran 99.7 2.5E-16 8.5E-21 118.6 14.0 116 55-179 19-135 (192)
138 3uwp_A Histone-lysine N-methyl 99.7 8.9E-17 3E-21 132.0 11.8 127 54-183 158-293 (438)
139 2yxd_A Probable cobalt-precorr 99.7 3.8E-16 1.3E-20 116.7 14.4 112 55-179 21-132 (183)
140 2frn_A Hypothetical protein PH 99.7 7.5E-16 2.6E-20 122.9 16.7 140 67-250 123-267 (278)
141 1o54_A SAM-dependent O-methylt 99.7 2.4E-16 8.3E-21 125.9 13.7 112 59-178 102-213 (277)
142 1g6q_1 HnRNP arginine N-methyl 99.7 1.4E-16 4.8E-21 130.1 11.4 117 54-175 23-142 (328)
143 2h00_A Methyltransferase 10 do 99.7 1E-16 3.5E-21 126.4 10.3 163 69-255 65-249 (254)
144 3tfw_A Putative O-methyltransf 99.7 7.9E-16 2.7E-20 120.9 15.1 111 66-181 60-173 (248)
145 3bgv_A MRNA CAP guanine-N7 met 99.7 2.1E-16 7.3E-21 128.4 12.3 112 68-181 33-158 (313)
146 3lbf_A Protein-L-isoaspartate 99.7 3.8E-16 1.3E-20 119.6 12.8 113 56-180 64-176 (210)
147 3fzg_A 16S rRNA methylase; met 99.7 3.4E-17 1.2E-21 120.5 6.4 105 68-178 48-152 (200)
148 2ozv_A Hypothetical protein AT 99.7 9.9E-16 3.4E-20 121.1 15.1 115 61-178 28-170 (260)
149 3dxy_A TRNA (guanine-N(7)-)-me 99.7 1.2E-16 4.1E-21 122.9 9.0 106 69-178 34-150 (218)
150 3tma_A Methyltransferase; thum 99.7 1.7E-15 6E-20 125.0 16.5 122 54-178 188-317 (354)
151 3gdh_A Trimethylguanosine synt 99.7 1.1E-17 3.7E-22 131.0 3.1 102 68-175 77-178 (241)
152 1af7_A Chemotaxis receptor met 99.7 5.6E-16 1.9E-20 122.6 12.7 109 69-177 105-251 (274)
153 1ixk_A Methyltransferase; open 99.7 7.4E-16 2.5E-20 125.0 13.5 121 58-181 107-249 (315)
154 4dcm_A Ribosomal RNA large sub 99.7 1.1E-15 3.7E-20 126.7 14.3 124 54-179 207-335 (375)
155 3lec_A NADB-rossmann superfami 99.7 3.2E-15 1.1E-19 114.6 15.8 130 67-244 19-148 (230)
156 1i9g_A Hypothetical protein RV 99.7 1.3E-15 4.4E-20 121.8 14.2 115 59-179 89-204 (280)
157 2yxe_A Protein-L-isoaspartate 99.7 1.1E-15 3.8E-20 117.4 13.3 116 56-180 64-179 (215)
158 3dmg_A Probable ribosomal RNA 99.7 1.1E-15 3.6E-20 126.9 13.9 118 55-179 217-341 (381)
159 3sso_A Methyltransferase; macr 99.7 1.7E-16 5.7E-21 130.1 8.4 132 34-180 183-326 (419)
160 3opn_A Putative hemolysin; str 99.7 1.1E-16 3.9E-21 124.0 6.6 148 68-245 36-184 (232)
161 2ld4_A Anamorsin; methyltransf 99.7 3.3E-16 1.1E-20 116.6 8.6 117 65-237 8-128 (176)
162 1dl5_A Protein-L-isoaspartate 99.7 1.3E-15 4.3E-20 124.0 12.7 115 56-179 62-176 (317)
163 3kr9_A SAM-dependent methyltra 99.6 3.6E-15 1.2E-19 114.1 14.3 128 67-243 13-141 (225)
164 3gnl_A Uncharacterized protein 99.6 4E-15 1.4E-19 114.9 14.4 129 67-243 19-147 (244)
165 2b25_A Hypothetical protein; s 99.6 4.2E-15 1.4E-19 121.9 15.1 117 58-179 94-220 (336)
166 2esr_A Methyltransferase; stru 99.6 3.9E-16 1.3E-20 116.3 8.1 119 58-181 19-141 (177)
167 3ckk_A TRNA (guanine-N(7)-)-me 99.6 7.9E-16 2.7E-20 119.7 10.0 111 67-178 44-168 (235)
168 2pjd_A Ribosomal RNA small sub 99.6 1.4E-15 4.6E-20 125.1 11.9 118 56-180 183-305 (343)
169 1p91_A Ribosomal RNA large sub 99.6 2.2E-15 7.4E-20 119.8 12.7 100 68-183 84-183 (269)
170 3bzb_A Uncharacterized protein 99.6 9.9E-15 3.4E-19 116.7 16.3 121 55-177 65-204 (281)
171 2ift_A Putative methylase HI07 99.6 5.9E-16 2E-20 117.7 8.6 109 69-181 53-166 (201)
172 2fhp_A Methylase, putative; al 99.6 1E-15 3.5E-20 114.9 9.7 120 57-181 31-157 (187)
173 1vbf_A 231AA long hypothetical 99.6 3E-15 1E-19 116.3 12.6 112 56-181 57-168 (231)
174 4hc4_A Protein arginine N-meth 99.6 1.5E-15 5.1E-20 125.0 11.3 120 51-176 65-187 (376)
175 3dr5_A Putative O-methyltransf 99.6 1.7E-15 5.8E-20 116.8 11.0 117 59-179 46-164 (221)
176 3tm4_A TRNA (guanine N2-)-meth 99.6 6.3E-15 2.2E-19 122.3 15.1 149 55-253 204-360 (373)
177 3hp7_A Hemolysin, putative; st 99.6 7.9E-15 2.7E-19 116.4 14.4 145 68-246 84-233 (291)
178 1ej0_A FTSJ; methyltransferase 99.6 2.6E-15 9E-20 111.5 11.0 104 66-183 19-141 (180)
179 1u2z_A Histone-lysine N-methyl 99.6 4.9E-15 1.7E-19 124.0 13.7 121 57-180 230-361 (433)
180 3ntv_A MW1564 protein; rossman 99.6 1E-15 3.6E-20 119.0 9.0 117 58-180 60-178 (232)
181 1i1n_A Protein-L-isoaspartate 99.6 7.1E-15 2.4E-19 113.8 13.2 115 60-180 66-184 (226)
182 2fpo_A Methylase YHHF; structu 99.6 1.6E-15 5.5E-20 115.4 9.3 106 69-180 54-162 (202)
183 3r3h_A O-methyltransferase, SA 99.6 1.7E-16 5.7E-21 124.1 3.9 116 61-181 52-173 (242)
184 3duw_A OMT, O-methyltransferas 99.6 1.4E-15 4.7E-20 117.5 8.7 116 61-181 50-170 (223)
185 2gpy_A O-methyltransferase; st 99.6 1.5E-15 5E-20 118.2 8.7 118 57-180 42-162 (233)
186 3adn_A Spermidine synthase; am 99.6 2.4E-14 8.2E-19 114.7 15.5 110 68-178 82-198 (294)
187 3tr6_A O-methyltransferase; ce 99.6 1.3E-15 4.6E-20 117.8 8.0 113 64-181 59-177 (225)
188 3c3p_A Methyltransferase; NP_9 99.6 2E-15 6.7E-20 115.6 8.6 108 68-181 55-163 (210)
189 1o9g_A RRNA methyltransferase; 99.6 4.8E-15 1.6E-19 116.6 10.9 114 65-180 47-216 (250)
190 2pbf_A Protein-L-isoaspartate 99.6 8.2E-15 2.8E-19 113.5 11.4 115 60-180 69-195 (227)
191 1nv8_A HEMK protein; class I a 99.6 1.1E-14 3.7E-19 116.4 12.3 118 54-177 108-248 (284)
192 1jg1_A PIMT;, protein-L-isoasp 99.6 1.3E-14 4.5E-19 113.0 12.3 114 56-181 78-192 (235)
193 1sui_A Caffeoyl-COA O-methyltr 99.6 3.5E-15 1.2E-19 117.0 8.9 110 66-180 76-192 (247)
194 3b3j_A Histone-arginine methyl 99.6 3.2E-15 1.1E-19 127.6 9.1 117 54-176 143-261 (480)
195 2bm8_A Cephalosporin hydroxyla 99.6 4.4E-15 1.5E-19 115.6 8.7 100 69-179 81-188 (236)
196 1ws6_A Methyltransferase; stru 99.6 1.6E-15 5.5E-20 112.1 5.7 106 69-183 41-152 (171)
197 2vdv_E TRNA (guanine-N(7)-)-me 99.6 1.8E-14 6E-19 113.0 11.9 110 68-178 48-173 (246)
198 1r18_A Protein-L-isoaspartate( 99.6 1.7E-14 5.7E-19 111.8 11.6 114 59-179 72-195 (227)
199 3ajd_A Putative methyltransfer 99.6 1.8E-14 6.3E-19 114.7 11.2 118 61-181 75-214 (274)
200 2yvl_A TRMI protein, hypotheti 99.6 7.1E-14 2.4E-18 109.6 14.4 111 59-179 81-191 (248)
201 2pt6_A Spermidine synthase; tr 99.6 5.7E-14 2E-18 114.0 14.1 110 68-178 115-230 (321)
202 1iy9_A Spermidine synthase; ro 99.6 5E-14 1.7E-18 112.1 13.5 110 68-178 74-189 (275)
203 2plw_A Ribosomal RNA methyltra 99.6 2.4E-14 8.3E-19 108.7 11.1 101 67-181 20-157 (201)
204 1wy7_A Hypothetical protein PH 99.6 2.4E-13 8.2E-18 103.7 16.7 94 66-168 46-141 (207)
205 2igt_A SAM dependent methyltra 99.6 3.7E-14 1.3E-18 115.6 12.5 120 57-180 140-274 (332)
206 1inl_A Spermidine synthase; be 99.6 6.1E-14 2.1E-18 112.8 13.4 110 68-178 89-205 (296)
207 2qm3_A Predicted methyltransfe 99.6 1.7E-13 5.7E-18 113.9 16.4 105 68-178 171-277 (373)
208 2yxl_A PH0851 protein, 450AA l 99.6 9.6E-14 3.3E-18 118.0 15.0 123 57-182 247-393 (450)
209 3cbg_A O-methyltransferase; cy 99.5 9.6E-15 3.3E-19 113.5 8.1 110 67-181 70-185 (232)
210 2i7c_A Spermidine synthase; tr 99.5 7.9E-14 2.7E-18 111.4 13.5 111 67-178 76-192 (283)
211 2hnk_A SAM-dependent O-methylt 99.5 5.9E-15 2E-19 115.2 6.7 116 60-180 51-183 (239)
212 3gjy_A Spermidine synthase; AP 99.5 6E-14 2.1E-18 112.6 12.5 108 70-181 90-203 (317)
213 3c3y_A Pfomt, O-methyltransfer 99.5 1.8E-14 6.1E-19 112.3 9.1 109 66-179 67-182 (237)
214 1xj5_A Spermidine synthase 1; 99.5 7.5E-14 2.6E-18 113.7 12.9 110 67-177 118-234 (334)
215 3a27_A TYW2, uncharacterized p 99.5 4.6E-14 1.6E-18 112.2 11.4 108 65-181 115-222 (272)
216 3lcv_B Sisomicin-gentamicin re 99.5 1.3E-13 4.4E-18 106.2 12.7 104 68-178 131-236 (281)
217 1uir_A Polyamine aminopropyltr 99.5 7.7E-14 2.6E-18 113.1 12.2 110 68-178 76-195 (314)
218 2b2c_A Spermidine synthase; be 99.5 6.7E-14 2.3E-18 113.1 11.7 110 68-178 107-222 (314)
219 2o07_A Spermidine synthase; st 99.5 4.9E-14 1.7E-18 113.6 10.5 112 67-179 93-210 (304)
220 2avd_A Catechol-O-methyltransf 99.5 1.5E-14 5E-19 112.2 7.1 112 64-180 64-181 (229)
221 4azs_A Methyltransferase WBDD; 99.5 9.7E-15 3.3E-19 127.6 6.8 107 69-181 66-176 (569)
222 1ne2_A Hypothetical protein TA 99.5 3.9E-13 1.3E-17 101.9 14.9 90 66-168 48-139 (200)
223 3m4x_A NOL1/NOP2/SUN family pr 99.5 9.6E-14 3.3E-18 117.1 11.0 120 59-181 95-237 (456)
224 1mjf_A Spermidine synthase; sp 99.5 2.2E-13 7.7E-18 108.7 12.4 107 68-178 74-193 (281)
225 2frx_A Hypothetical protein YE 99.5 2E-13 7E-18 116.3 12.9 121 59-182 105-250 (479)
226 2cmg_A Spermidine synthase; tr 99.5 2.9E-13 9.9E-18 106.7 12.8 100 68-178 71-171 (262)
227 1sqg_A SUN protein, FMU protei 99.5 3.9E-13 1.3E-17 113.6 13.6 123 55-182 232-378 (429)
228 2xyq_A Putative 2'-O-methyl tr 99.5 2.1E-13 7.2E-18 108.5 11.0 97 65-180 59-173 (290)
229 3frh_A 16S rRNA methylase; met 99.5 1.2E-12 4.1E-17 99.9 13.8 102 68-178 104-206 (253)
230 3m6w_A RRNA methylase; rRNA me 99.5 1.7E-13 5.7E-18 115.8 10.1 122 59-184 91-235 (464)
231 3k6r_A Putative transferase PH 99.5 1.2E-12 4.2E-17 103.4 14.3 105 67-180 123-227 (278)
232 2nyu_A Putative ribosomal RNA 99.5 4.5E-13 1.5E-17 101.2 10.6 101 67-181 20-148 (196)
233 2f8l_A Hypothetical protein LM 99.4 1.5E-12 5.2E-17 107.0 13.9 110 66-180 127-258 (344)
234 1zq9_A Probable dimethyladenos 99.4 1.4E-12 4.7E-17 104.3 13.2 113 55-174 14-143 (285)
235 2oxt_A Nucleoside-2'-O-methylt 99.4 1.9E-13 6.6E-18 107.8 7.5 107 65-180 70-187 (265)
236 2wa2_A Non-structural protein 99.4 1.4E-13 4.9E-18 109.2 6.7 106 66-180 79-195 (276)
237 3dou_A Ribosomal RNA large sub 99.4 1E-12 3.5E-17 98.9 9.2 98 67-181 23-142 (191)
238 4dmg_A Putative uncharacterize 99.4 3.4E-12 1.2E-16 106.1 12.6 107 68-181 213-329 (393)
239 1uwv_A 23S rRNA (uracil-5-)-me 99.4 1.4E-11 4.8E-16 104.2 15.8 114 54-177 271-388 (433)
240 3c0k_A UPF0064 protein YCCW; P 99.4 9.1E-12 3.1E-16 104.2 14.4 109 68-180 219-341 (396)
241 2b78_A Hypothetical protein SM 99.4 1E-12 3.5E-17 109.4 8.4 109 68-180 211-333 (385)
242 2p41_A Type II methyltransfera 99.4 1.6E-12 5.4E-17 104.7 8.0 105 66-181 79-194 (305)
243 2yx1_A Hypothetical protein MJ 99.3 6.2E-12 2.1E-16 102.9 11.5 101 68-181 194-294 (336)
244 2as0_A Hypothetical protein PH 99.3 2.7E-12 9.2E-17 107.5 8.7 110 68-181 216-338 (396)
245 3gru_A Dimethyladenosine trans 99.3 1E-11 3.4E-16 99.2 11.6 91 54-152 35-125 (295)
246 2h1r_A Dimethyladenosine trans 99.3 7.5E-12 2.6E-16 100.7 10.6 109 56-172 29-153 (299)
247 3ldu_A Putative methylase; str 99.3 4.9E-11 1.7E-15 99.1 15.4 123 54-179 180-345 (385)
248 3k0b_A Predicted N6-adenine-sp 99.3 7.7E-11 2.6E-15 98.1 16.3 123 54-179 186-351 (393)
249 2b9e_A NOL1/NOP2/SUN domain fa 99.3 7.7E-11 2.6E-15 94.9 15.8 120 60-183 93-239 (309)
250 3v97_A Ribosomal RNA large sub 99.3 8.7E-12 3E-16 111.1 10.7 121 54-180 527-659 (703)
251 1wxx_A TT1595, hypothetical pr 99.3 3.6E-12 1.2E-16 106.1 7.8 107 69-181 209-328 (382)
252 3ldg_A Putative uncharacterize 99.3 1.3E-10 4.6E-15 96.2 17.1 123 54-179 179-344 (384)
253 2okc_A Type I restriction enzy 99.3 2.2E-11 7.6E-16 103.4 12.3 150 28-179 128-308 (445)
254 1qam_A ERMC' methyltransferase 99.3 2E-11 6.9E-16 95.3 10.7 87 55-150 16-103 (244)
255 2ih2_A Modification methylase 99.3 2.5E-11 8.5E-16 102.5 10.5 112 56-180 26-166 (421)
256 2efj_A 3,7-dimethylxanthine me 99.3 2.4E-10 8.3E-15 94.0 15.8 162 70-245 53-292 (384)
257 2jjq_A Uncharacterized RNA met 99.2 1.8E-10 6E-15 96.9 13.9 100 67-178 288-387 (425)
258 2qfm_A Spermine synthase; sper 99.2 5.8E-11 2E-15 96.5 10.5 110 68-179 187-315 (364)
259 1yub_A Ermam, rRNA methyltrans 99.2 2.2E-12 7.5E-17 101.0 1.7 111 58-177 18-144 (245)
260 3b5i_A S-adenosyl-L-methionine 99.2 7.8E-10 2.7E-14 90.9 16.6 176 70-246 53-299 (374)
261 3fut_A Dimethyladenosine trans 99.2 9.2E-11 3.2E-15 92.6 9.7 90 54-153 32-122 (271)
262 3tqs_A Ribosomal RNA small sub 99.2 9.9E-11 3.4E-15 91.7 9.4 87 55-150 15-105 (255)
263 3o4f_A Spermidine synthase; am 99.1 2.9E-09 1E-13 84.2 15.6 110 68-178 82-198 (294)
264 3v97_A Ribosomal RNA large sub 99.1 1.9E-09 6.6E-14 96.1 15.8 123 54-178 175-347 (703)
265 1m6e_X S-adenosyl-L-methionnin 99.1 3.9E-10 1.3E-14 92.0 10.2 114 69-184 51-215 (359)
266 1m6y_A S-adenosyl-methyltransf 99.1 1.8E-10 6.3E-15 92.2 7.6 88 58-150 15-107 (301)
267 2ar0_A M.ecoki, type I restric 99.1 5.4E-10 1.8E-14 96.8 10.0 126 55-180 155-314 (541)
268 3bt7_A TRNA (uracil-5-)-methyl 99.1 4.8E-10 1.6E-14 92.9 8.8 113 55-180 200-328 (369)
269 4gqb_A Protein arginine N-meth 99.0 3.2E-09 1.1E-13 92.6 12.8 103 69-175 357-464 (637)
270 2dul_A N(2),N(2)-dimethylguano 99.0 5.1E-10 1.7E-14 92.6 7.2 102 69-178 47-164 (378)
271 3ftd_A Dimethyladenosine trans 99.0 2.6E-09 9E-14 83.4 10.9 75 55-138 17-91 (249)
272 2qy6_A UPF0209 protein YFCK; s 99.0 1.5E-09 5.1E-14 85.0 9.3 109 68-176 59-211 (257)
273 3axs_A Probable N(2),N(2)-dime 99.0 5.2E-10 1.8E-14 92.7 6.9 104 68-178 51-158 (392)
274 3uzu_A Ribosomal RNA small sub 99.0 1.9E-09 6.4E-14 85.6 9.7 77 55-138 28-105 (279)
275 2r6z_A UPF0341 protein in RSP 99.0 2.6E-10 8.9E-15 89.6 4.5 84 65-153 79-173 (258)
276 1qyr_A KSGA, high level kasuga 98.9 1.7E-09 5.8E-14 84.6 7.4 89 55-151 7-100 (252)
277 3khk_A Type I restriction-modi 98.9 4.4E-09 1.5E-13 91.0 10.6 150 28-180 202-397 (544)
278 2oyr_A UPF0341 protein YHIQ; a 98.9 2.5E-09 8.6E-14 83.6 6.7 106 61-170 78-192 (258)
279 3lkd_A Type I restriction-modi 98.9 3.7E-08 1.3E-12 85.1 13.5 124 56-180 204-360 (542)
280 3cvo_A Methyltransferase-like 98.9 3.3E-08 1.1E-12 74.1 11.4 101 69-178 30-154 (202)
281 3evf_A RNA-directed RNA polyme 98.9 1.2E-08 4.1E-13 79.2 9.1 110 65-180 70-186 (277)
282 3ll7_A Putative methyltransfer 98.8 2.3E-09 8E-14 89.0 4.8 75 69-149 93-171 (410)
283 3ua3_A Protein arginine N-meth 98.8 6.2E-08 2.1E-12 84.6 11.3 102 70-175 410-531 (745)
284 4fzv_A Putative methyltransfer 98.7 6.8E-08 2.3E-12 79.0 10.8 130 59-189 138-295 (359)
285 2wk1_A NOVP; transferase, O-me 98.6 1.7E-07 5.7E-12 74.1 9.4 120 57-179 94-245 (282)
286 3s1s_A Restriction endonucleas 98.6 4.6E-07 1.6E-11 80.4 13.0 113 68-180 320-467 (878)
287 3gcz_A Polyprotein; flavivirus 98.6 2.6E-08 8.8E-13 77.5 4.0 109 66-180 87-203 (282)
288 4auk_A Ribosomal RNA large sub 98.6 1.7E-06 5.7E-11 70.4 14.0 88 67-171 209-296 (375)
289 2vz8_A Fatty acid synthase; tr 98.5 4E-08 1.4E-12 98.3 4.2 150 68-243 1239-1393(2512)
290 1wg8_A Predicted S-adenosylmet 98.5 4.2E-07 1.4E-11 71.1 8.6 86 57-152 10-100 (285)
291 3c6k_A Spermine synthase; sper 98.5 3.7E-07 1.3E-11 74.5 8.6 107 69-177 205-330 (381)
292 2k4m_A TR8_protein, UPF0146 pr 98.5 1.5E-06 5.2E-11 60.7 9.6 88 69-181 35-124 (153)
293 3ufb_A Type I restriction-modi 98.4 7E-06 2.4E-10 70.9 14.0 124 54-180 202-364 (530)
294 3eld_A Methyltransferase; flav 98.4 3.5E-06 1.2E-10 66.0 10.4 107 67-180 79-193 (300)
295 3tka_A Ribosomal RNA small sub 98.1 3.7E-06 1.3E-10 67.3 6.1 89 57-152 45-139 (347)
296 1rjd_A PPM1P, carboxy methyl t 98.1 7.9E-05 2.7E-09 60.5 13.8 154 68-238 96-281 (334)
297 2px2_A Genome polyprotein [con 98.0 2.1E-05 7.2E-10 60.3 7.7 107 66-180 70-185 (269)
298 3lkz_A Non-structural protein 98.0 8.6E-05 2.9E-09 58.0 10.6 109 65-181 90-207 (321)
299 3p8z_A Mtase, non-structural p 97.9 8.1E-05 2.8E-09 56.3 9.7 110 66-183 75-191 (267)
300 2zig_A TTHA0409, putative modi 97.9 4.9E-05 1.7E-09 60.8 9.0 57 57-117 224-280 (297)
301 3vyw_A MNMC2; tRNA wobble urid 97.8 0.00031 1.1E-08 55.8 11.8 131 69-245 96-248 (308)
302 1i4w_A Mitochondrial replicati 97.7 0.00024 8.3E-09 57.8 9.2 72 57-135 40-117 (353)
303 2uyo_A Hypothetical protein ML 97.4 0.0041 1.4E-07 49.9 13.4 106 71-180 104-220 (310)
304 3r24_A NSP16, 2'-O-methyl tran 97.4 0.00062 2.1E-08 53.2 7.9 101 65-184 105-223 (344)
305 3iei_A Leucine carboxyl methyl 97.2 0.059 2E-06 43.5 19.3 160 69-245 90-281 (334)
306 2oo3_A Protein involved in cat 97.2 0.00032 1.1E-08 54.9 4.5 104 70-181 92-201 (283)
307 1g60_A Adenine-specific methyl 97.1 0.0015 5.1E-08 51.1 7.8 56 57-116 201-256 (260)
308 3g7u_A Cytosine-specific methy 97.1 0.013 4.4E-07 48.3 13.1 74 71-154 3-84 (376)
309 1f8f_A Benzyl alcohol dehydrog 96.7 0.0091 3.1E-07 49.1 9.4 100 63-179 184-290 (371)
310 2py6_A Methyltransferase FKBM; 96.6 0.0067 2.3E-07 50.6 8.1 68 67-134 224-293 (409)
311 2dph_A Formaldehyde dismutase; 96.6 0.0089 3E-07 49.7 8.8 105 63-179 179-300 (398)
312 1pqw_A Polyketide synthase; ro 96.5 0.013 4.6E-07 43.4 8.4 96 64-179 33-138 (198)
313 3pvc_A TRNA 5-methylaminomethy 96.3 0.012 4.1E-07 52.6 8.3 107 69-175 58-208 (689)
314 3tos_A CALS11; methyltransfera 96.2 0.083 2.8E-06 40.9 11.6 109 70-181 70-220 (257)
315 3ps9_A TRNA 5-methylaminomethy 96.2 0.026 9E-07 50.3 10.0 107 69-175 66-216 (676)
316 3qv2_A 5-cytosine DNA methyltr 96.2 0.045 1.5E-06 44.1 10.4 75 70-154 10-89 (327)
317 3two_A Mannitol dehydrogenase; 96.2 0.032 1.1E-06 45.4 9.4 94 65-179 172-266 (348)
318 3s2e_A Zinc-containing alcohol 96.1 0.022 7.7E-07 46.1 8.3 100 63-179 160-264 (340)
319 1g55_A DNA cytosine methyltran 96.1 0.0066 2.3E-07 49.4 5.1 75 71-154 3-81 (343)
320 2c7p_A Modification methylase 96.1 0.24 8.3E-06 39.8 14.1 73 70-154 11-84 (327)
321 1kol_A Formaldehyde dehydrogen 96.1 0.033 1.1E-06 46.2 9.2 103 64-178 180-300 (398)
322 3gms_A Putative NADPH:quinone 96.0 0.033 1.1E-06 45.1 8.9 100 63-180 138-245 (340)
323 1pl8_A Human sorbitol dehydrog 95.9 0.039 1.3E-06 45.0 8.9 100 63-179 165-274 (356)
324 3m6i_A L-arabinitol 4-dehydrog 95.9 0.1 3.6E-06 42.5 11.3 102 63-180 173-285 (363)
325 1e3j_A NADP(H)-dependent ketos 95.8 0.095 3.3E-06 42.6 10.9 100 63-179 162-272 (352)
326 3fpc_A NADP-dependent alcohol 95.8 0.027 9.4E-07 45.8 7.6 100 63-179 160-267 (352)
327 4b7c_A Probable oxidoreductase 95.8 0.045 1.5E-06 44.2 8.7 99 63-178 143-248 (336)
328 3uko_A Alcohol dehydrogenase c 95.8 0.073 2.5E-06 43.8 10.0 100 63-179 187-296 (378)
329 4ej6_A Putative zinc-binding d 95.7 0.075 2.6E-06 43.6 9.9 101 63-180 176-286 (370)
330 3uog_A Alcohol dehydrogenase; 95.6 0.064 2.2E-06 43.8 9.1 100 63-180 183-289 (363)
331 1p0f_A NADP-dependent alcohol 95.6 0.11 3.9E-06 42.5 10.6 100 63-179 185-294 (373)
332 2fzw_A Alcohol dehydrogenase c 95.6 0.12 4E-06 42.4 10.6 100 63-179 184-293 (373)
333 1v3u_A Leukotriene B4 12- hydr 95.5 0.071 2.4E-06 42.9 8.9 96 63-178 139-244 (333)
334 1cdo_A Alcohol dehydrogenase; 95.5 0.1 3.5E-06 42.8 9.9 100 63-179 186-295 (374)
335 4f3n_A Uncharacterized ACR, CO 95.5 0.045 1.5E-06 45.6 7.6 47 70-116 138-188 (432)
336 2jhf_A Alcohol dehydrogenase E 95.5 0.13 4.4E-06 42.2 10.4 100 63-179 185-294 (374)
337 2zig_A TTHA0409, putative modi 95.4 0.024 8.2E-07 45.1 5.5 56 123-178 20-97 (297)
338 3ip1_A Alcohol dehydrogenase, 95.3 0.16 5.5E-06 42.1 10.7 99 66-180 210-320 (404)
339 3jyn_A Quinone oxidoreductase; 95.3 0.066 2.3E-06 43.0 8.1 99 64-180 135-241 (325)
340 1uuf_A YAHK, zinc-type alcohol 95.3 0.089 3E-06 43.1 8.8 96 65-178 190-288 (369)
341 3goh_A Alcohol dehydrogenase, 95.2 0.041 1.4E-06 44.0 6.6 93 63-178 136-229 (315)
342 1e3i_A Alcohol dehydrogenase, 95.2 0.13 4.6E-06 42.1 9.8 100 63-179 189-298 (376)
343 2c0c_A Zinc binding alcohol de 95.2 0.14 4.7E-06 41.8 9.8 98 64-179 158-262 (362)
344 4eye_A Probable oxidoreductase 95.2 0.072 2.5E-06 43.2 7.9 97 63-178 153-257 (342)
345 3qwb_A Probable quinone oxidor 95.1 0.077 2.6E-06 42.8 7.9 96 65-178 144-247 (334)
346 2j3h_A NADP-dependent oxidored 95.1 0.13 4.3E-06 41.7 9.1 99 63-178 149-255 (345)
347 4a2c_A Galactitol-1-phosphate 95.0 0.51 1.7E-05 38.1 12.5 104 62-181 153-263 (346)
348 2d8a_A PH0655, probable L-thre 95.0 0.13 4.5E-06 41.7 8.9 98 64-179 163-268 (348)
349 2zwa_A Leucine carboxyl methyl 95.0 0.89 3E-05 40.6 14.9 159 69-245 107-309 (695)
350 4h0n_A DNMT2; SAH binding, tra 94.9 0.053 1.8E-06 43.8 6.4 75 71-154 4-82 (333)
351 1jvb_A NAD(H)-dependent alcoho 94.8 0.093 3.2E-06 42.6 7.7 99 65-179 166-272 (347)
352 2eih_A Alcohol dehydrogenase; 94.8 0.18 6.1E-06 40.8 9.3 97 65-179 162-266 (343)
353 2hcy_A Alcohol dehydrogenase 1 94.8 0.092 3.1E-06 42.6 7.6 96 65-179 165-270 (347)
354 1zkd_A DUF185; NESG, RPR58, st 94.8 0.31 1.1E-05 40.1 10.6 81 66-155 77-163 (387)
355 1qor_A Quinone oxidoreductase; 94.8 0.11 3.7E-06 41.8 7.9 98 64-179 135-240 (327)
356 1boo_A Protein (N-4 cytosine-s 94.8 0.096 3.3E-06 42.1 7.5 47 67-116 250-296 (323)
357 2h6e_A ADH-4, D-arabinose 1-de 94.7 0.063 2.2E-06 43.5 6.3 97 66-179 168-270 (344)
358 1piw_A Hypothetical zinc-type 94.7 0.16 5.6E-06 41.3 8.8 98 65-178 175-276 (360)
359 2qrv_A DNA (cytosine-5)-methyl 94.6 0.14 4.8E-06 40.6 7.9 76 68-152 14-94 (295)
360 1yb5_A Quinone oxidoreductase; 94.6 0.15 5.2E-06 41.4 8.3 97 64-178 165-269 (351)
361 1eg2_A Modification methylase 94.5 0.13 4.3E-06 41.4 7.5 57 56-116 230-289 (319)
362 1wly_A CAAR, 2-haloacrylate re 94.3 0.21 7.2E-06 40.2 8.6 98 64-179 140-245 (333)
363 3jv7_A ADH-A; dehydrogenase, n 94.3 0.13 4.3E-06 41.7 7.3 98 66-180 168-272 (345)
364 1rjw_A ADH-HT, alcohol dehydro 94.3 0.21 7E-06 40.4 8.5 96 65-179 160-262 (339)
365 2zb4_A Prostaglandin reductase 94.2 0.24 8.1E-06 40.3 8.8 99 63-178 152-260 (357)
366 1vj0_A Alcohol dehydrogenase, 94.1 0.15 5E-06 42.0 7.3 99 64-179 189-299 (380)
367 1boo_A Protein (N-4 cytosine-s 94.0 0.058 2E-06 43.4 4.7 56 123-178 13-84 (323)
368 4dup_A Quinone oxidoreductase; 94.0 0.16 5.6E-06 41.2 7.4 99 63-179 161-266 (353)
369 2j8z_A Quinone oxidoreductase; 94.0 0.2 6.9E-06 40.7 7.8 98 64-179 157-262 (354)
370 4dvj_A Putative zinc-dependent 93.9 0.32 1.1E-05 39.7 8.9 92 69-177 171-269 (363)
371 3fwz_A Inner membrane protein 93.8 0.81 2.8E-05 31.5 9.8 93 70-177 7-104 (140)
372 4eez_A Alcohol dehydrogenase 1 93.8 0.54 1.9E-05 37.9 10.1 101 63-179 157-264 (348)
373 3fbg_A Putative arginate lyase 93.4 0.34 1.2E-05 39.2 8.3 91 69-177 150-247 (346)
374 2b5w_A Glucose dehydrogenase; 93.3 0.19 6.5E-06 40.9 6.6 94 66-179 163-274 (357)
375 3nx4_A Putative oxidoreductase 93.0 0.51 1.7E-05 37.7 8.7 90 72-179 149-242 (324)
376 3krt_A Crotonyl COA reductase; 92.8 0.55 1.9E-05 39.6 8.9 96 65-178 224-344 (456)
377 3llv_A Exopolyphosphatase-rela 92.7 1.5 5E-05 30.0 9.7 69 70-150 6-79 (141)
378 3me5_A Cytosine-specific methy 92.6 2 6.9E-05 36.5 11.9 78 71-155 89-183 (482)
379 1g60_A Adenine-specific methyl 92.5 0.13 4.6E-06 39.8 4.4 54 124-177 4-73 (260)
380 2cdc_A Glucose dehydrogenase g 92.4 0.74 2.5E-05 37.5 9.0 90 70-180 181-280 (366)
381 2cf5_A Atccad5, CAD, cinnamyl 92.3 0.23 7.8E-06 40.4 5.8 98 65-179 175-276 (357)
382 3tqh_A Quinone oxidoreductase; 92.2 0.77 2.6E-05 36.6 8.7 96 63-177 146-244 (321)
383 1yqd_A Sinapyl alcohol dehydro 91.9 0.24 8.1E-06 40.5 5.4 98 65-179 182-283 (366)
384 1xa0_A Putative NADPH dependen 91.7 0.58 2E-05 37.4 7.5 96 65-178 144-246 (328)
385 1iz0_A Quinone oxidoreductase; 91.5 0.18 6.1E-06 40.0 4.2 91 67-178 123-218 (302)
386 1pjc_A Protein (L-alanine dehy 91.5 0.11 3.8E-06 42.5 3.0 100 70-178 167-267 (361)
387 2vhw_A Alanine dehydrogenase; 91.4 0.11 3.6E-06 42.9 2.8 101 69-178 167-268 (377)
388 1tt7_A YHFP; alcohol dehydroge 91.4 0.79 2.7E-05 36.7 8.0 97 65-179 145-248 (330)
389 4a0s_A Octenoyl-COA reductase/ 91.3 1.1 3.8E-05 37.6 9.1 96 65-178 216-336 (447)
390 3gaz_A Alcohol dehydrogenase s 91.3 0.66 2.2E-05 37.4 7.4 95 63-178 144-246 (343)
391 3ubt_Y Modification methylase 91.2 0.73 2.5E-05 36.9 7.6 72 72-154 2-74 (331)
392 3c85_A Putative glutathione-re 91.1 1.9 6.3E-05 31.1 9.1 93 70-177 39-138 (183)
393 3iht_A S-adenosyl-L-methionine 90.8 0.99 3.4E-05 31.8 6.7 96 71-177 42-146 (174)
394 2dq4_A L-threonine 3-dehydroge 90.8 0.087 3E-06 42.7 1.7 97 64-179 160-263 (343)
395 2vn8_A Reticulon-4-interacting 90.7 1.5 5.2E-05 35.8 9.1 95 67-178 181-280 (375)
396 3grk_A Enoyl-(acyl-carrier-pro 90.6 3.1 0.0001 32.6 10.6 105 69-178 30-169 (293)
397 4dio_A NAD(P) transhydrogenase 90.3 0.55 1.9E-05 38.8 6.1 42 69-112 189-231 (405)
398 2km1_A Protein DRE2; yeast, an 90.2 0.26 9E-06 33.8 3.4 41 136-176 54-96 (136)
399 2eez_A Alanine dehydrogenase; 90.2 0.16 5.5E-06 41.6 2.8 101 69-178 165-266 (369)
400 3l9w_A Glutathione-regulated p 90.1 1.8 6.2E-05 35.9 9.1 94 70-178 4-102 (413)
401 4eso_A Putative oxidoreductase 89.8 1.7 5.8E-05 33.3 8.3 102 69-178 7-138 (255)
402 3p2y_A Alanine dehydrogenase/p 89.7 0.17 5.7E-06 41.6 2.5 42 69-112 183-225 (381)
403 3oig_A Enoyl-[acyl-carrier-pro 89.6 4.2 0.00014 31.1 10.5 107 69-178 6-147 (266)
404 4dcm_A Ribosomal RNA large sub 89.6 4.5 0.00015 33.1 11.1 102 69-181 38-139 (375)
405 3gqv_A Enoyl reductase; medium 89.6 2 6.7E-05 35.1 8.9 93 68-178 163-263 (371)
406 3pxx_A Carveol dehydrogenase; 89.2 4.4 0.00015 31.3 10.5 105 69-178 9-153 (287)
407 3ioy_A Short-chain dehydrogena 89.2 3.2 0.00011 33.0 9.8 81 69-152 7-98 (319)
408 3ius_A Uncharacterized conserv 89.0 6.5 0.00022 30.2 12.8 70 71-154 6-76 (286)
409 2g1u_A Hypothetical protein TM 88.4 2.5 8.5E-05 29.5 7.7 95 68-176 17-116 (155)
410 3o26_A Salutaridine reductase; 88.2 6.9 0.00024 30.5 11.1 80 69-152 11-102 (311)
411 4fs3_A Enoyl-[acyl-carrier-pro 88.1 5.7 0.00019 30.4 10.2 77 69-151 5-96 (256)
412 3ggo_A Prephenate dehydrogenas 87.8 3.8 0.00013 32.6 9.2 89 70-174 33-124 (314)
413 3ijr_A Oxidoreductase, short c 87.7 5.4 0.00019 31.1 10.1 105 69-178 46-182 (291)
414 2hwk_A Helicase NSP2; rossman 87.4 0.58 2E-05 36.4 3.9 98 78-183 150-259 (320)
415 1id1_A Putative potassium chan 87.3 5.6 0.00019 27.5 9.4 96 70-177 3-104 (153)
416 4g65_A TRK system potassium up 87.2 1.2 3.9E-05 37.7 6.1 65 72-147 5-74 (461)
417 1l7d_A Nicotinamide nucleotide 86.9 0.46 1.6E-05 39.1 3.5 42 69-112 171-213 (384)
418 4g81_D Putative hexonate dehyd 86.9 4.6 0.00016 31.1 8.9 80 69-153 8-98 (255)
419 1wma_A Carbonyl reductase [NAD 86.7 1.8 6E-05 33.2 6.6 104 70-178 4-138 (276)
420 3is3_A 17BETA-hydroxysteroid d 86.6 5.6 0.00019 30.6 9.5 106 69-179 17-153 (270)
421 3l4b_C TRKA K+ channel protien 86.5 3.8 0.00013 30.4 8.2 91 72-176 2-97 (218)
422 4fgs_A Probable dehydrogenase 86.5 3.3 0.00011 32.2 8.0 102 69-178 28-159 (273)
423 3k31_A Enoyl-(acyl-carrier-pro 86.3 5.1 0.00017 31.4 9.2 105 69-178 29-168 (296)
424 1x13_A NAD(P) transhydrogenase 85.8 0.36 1.2E-05 40.1 2.3 41 69-111 171-212 (401)
425 2gdz_A NAD+-dependent 15-hydro 85.6 5.5 0.00019 30.5 9.0 82 70-154 7-99 (267)
426 4imr_A 3-oxoacyl-(acyl-carrier 85.6 5.5 0.00019 30.8 9.0 78 69-151 32-119 (275)
427 3v2g_A 3-oxoacyl-[acyl-carrier 85.5 8.2 0.00028 29.7 9.9 105 69-178 30-165 (271)
428 3edm_A Short chain dehydrogena 85.4 2.9 9.8E-05 32.1 7.2 105 69-178 7-143 (259)
429 3h2s_A Putative NADH-flavin re 85.4 7.2 0.00025 28.6 9.3 95 72-177 2-103 (224)
430 3ce6_A Adenosylhomocysteinase; 85.1 3.2 0.00011 35.4 7.7 91 67-179 271-362 (494)
431 1lss_A TRK system potassium up 85.0 6.7 0.00023 26.3 10.4 91 71-176 5-100 (140)
432 3r3s_A Oxidoreductase; structu 85.0 5.9 0.0002 30.9 9.0 105 69-178 48-185 (294)
433 1zsy_A Mitochondrial 2-enoyl t 84.8 9.3 0.00032 30.7 10.3 97 64-178 162-270 (357)
434 3swr_A DNA (cytosine-5)-methyl 84.4 2.4 8.2E-05 39.4 7.1 76 70-154 540-631 (1002)
435 3ek2_A Enoyl-(acyl-carrier-pro 84.4 8.3 0.00028 29.4 9.5 106 68-178 12-153 (271)
436 1xg5_A ARPG836; short chain de 84.2 12 0.00042 28.7 10.9 79 70-151 32-121 (279)
437 1qsg_A Enoyl-[acyl-carrier-pro 83.9 12 0.00041 28.5 10.2 79 69-152 8-98 (265)
438 3pi7_A NADH oxidoreductase; gr 83.6 2.8 9.6E-05 33.7 6.6 90 71-178 166-263 (349)
439 4a27_A Synaptic vesicle membra 83.1 2.1 7.2E-05 34.5 5.7 97 63-179 136-239 (349)
440 3i6i_A Putative leucoanthocyan 82.9 4.7 0.00016 32.2 7.7 88 71-166 11-108 (346)
441 1ej6_A Lambda2; icosahedral, n 82.6 1.1 3.7E-05 41.4 4.0 103 67-181 819-928 (1289)
442 4e12_A Diketoreductase; oxidor 82.5 3 0.0001 32.5 6.2 97 71-174 5-117 (283)
443 2rir_A Dipicolinate synthase, 82.4 9.7 0.00033 29.9 9.2 89 68-177 155-245 (300)
444 3gvc_A Oxidoreductase, probabl 82.4 10 0.00035 29.3 9.2 76 69-152 28-114 (277)
445 2f1k_A Prephenate dehydrogenas 82.2 9.4 0.00032 29.4 9.0 84 72-174 2-87 (279)
446 3nzo_A UDP-N-acetylglucosamine 82.2 5.3 0.00018 32.8 7.9 83 70-153 35-124 (399)
447 3b1f_A Putative prephenate deh 82.0 9.8 0.00033 29.5 9.1 89 71-175 7-98 (290)
448 3t4x_A Oxidoreductase, short c 81.7 9.9 0.00034 29.1 8.9 80 70-152 10-96 (267)
449 3ksu_A 3-oxoacyl-acyl carrier 81.7 10 0.00035 28.9 9.0 105 69-178 10-147 (262)
450 3dmg_A Probable ribosomal RNA 81.6 3.6 0.00012 33.7 6.6 108 56-180 33-141 (381)
451 1y1p_A ARII, aldehyde reductas 81.3 15 0.00053 28.8 10.3 81 68-152 9-94 (342)
452 3d4o_A Dipicolinate synthase s 81.2 6.1 0.00021 30.9 7.6 89 68-177 153-243 (293)
453 2h7i_A Enoyl-[acyl-carrier-pro 81.2 5.1 0.00017 30.8 7.1 103 69-178 6-148 (269)
454 3sx2_A Putative 3-ketoacyl-(ac 81.0 8.6 0.00029 29.6 8.4 80 69-153 12-114 (278)
455 1eg2_A Modification methylase 80.9 0.45 1.5E-05 38.1 0.9 55 124-178 38-106 (319)
456 3e8x_A Putative NAD-dependent 80.7 15 0.00052 27.2 9.6 74 69-153 20-96 (236)
457 1zcj_A Peroxisomal bifunctiona 80.7 16 0.00054 30.8 10.4 97 71-175 38-147 (463)
458 3r6d_A NAD-dependent epimerase 80.3 15 0.00051 26.9 11.6 93 72-178 7-107 (221)
459 2g5c_A Prephenate dehydrogenas 80.1 11 0.00037 29.0 8.7 87 72-175 3-93 (281)
460 2i6t_A Ubiquitin-conjugating e 79.5 5.7 0.00019 31.4 6.9 97 70-177 14-124 (303)
461 3u5t_A 3-oxoacyl-[acyl-carrier 79.4 7 0.00024 30.0 7.3 105 69-178 26-161 (267)
462 2ew2_A 2-dehydropantoate 2-red 79.2 17 0.00057 28.4 9.7 97 72-176 5-106 (316)
463 3abi_A Putative uncharacterize 79.1 4.2 0.00014 33.0 6.2 67 70-149 16-85 (365)
464 1g0o_A Trihydroxynaphthalene r 78.7 12 0.00041 28.9 8.6 104 70-178 29-163 (283)
465 1t2d_A LDH-P, L-lactate dehydr 78.6 23 0.00079 28.1 10.5 102 70-177 4-125 (322)
466 4ft4_B DNA (cytosine-5)-methyl 78.5 38 0.0013 30.6 13.4 45 70-114 212-260 (784)
467 4fn4_A Short chain dehydrogena 78.2 10 0.00035 29.1 7.8 78 69-151 6-94 (254)
468 3hwr_A 2-dehydropantoate 2-red 77.8 16 0.00056 28.8 9.2 94 70-177 19-119 (318)
469 1gu7_A Enoyl-[acyl-carrier-pro 77.6 9 0.00031 30.9 7.8 97 65-179 162-276 (364)
470 4g65_A TRK system potassium up 77.3 5.3 0.00018 33.7 6.4 70 69-148 234-307 (461)
471 3c24_A Putative oxidoreductase 77.1 13 0.00045 28.7 8.4 83 71-174 12-97 (286)
472 3mog_A Probable 3-hydroxybutyr 76.9 16 0.00054 31.0 9.2 96 71-175 6-117 (483)
473 3ucx_A Short chain dehydrogena 76.8 14 0.00047 28.2 8.3 78 69-151 10-98 (264)
474 3h7a_A Short chain dehydrogena 76.6 8 0.00027 29.3 6.9 79 69-152 6-94 (252)
475 2p91_A Enoyl-[acyl-carrier-pro 76.6 21 0.00071 27.5 9.4 79 69-152 20-110 (285)
476 3ado_A Lambda-crystallin; L-gu 76.4 3.9 0.00013 32.6 5.1 99 70-175 6-120 (319)
477 3f9i_A 3-oxoacyl-[acyl-carrier 76.4 11 0.00036 28.4 7.5 77 68-152 12-95 (249)
478 3qiv_A Short-chain dehydrogena 76.2 10 0.00035 28.6 7.4 78 69-151 8-96 (253)
479 2dpo_A L-gulonate 3-dehydrogen 76.1 10 0.00035 30.2 7.5 97 71-175 7-120 (319)
480 1guz_A Malate dehydrogenase; o 76.1 26 0.0009 27.5 9.9 101 72-177 2-117 (310)
481 2pd4_A Enoyl-[acyl-carrier-pro 75.9 21 0.00071 27.3 9.2 78 70-152 6-95 (275)
482 4f6c_A AUSA reductase domain p 75.7 32 0.0011 28.2 11.7 82 69-151 68-160 (427)
483 3ew7_A LMO0794 protein; Q8Y8U8 75.5 21 0.0007 25.9 9.5 94 72-177 2-101 (221)
484 3g0o_A 3-hydroxyisobutyrate de 75.4 15 0.00052 28.7 8.3 87 71-175 8-99 (303)
485 3tjr_A Short chain dehydrogena 75.3 13 0.00043 29.2 7.8 79 69-152 30-119 (301)
486 2aef_A Calcium-gated potassium 74.6 24 0.00081 26.2 10.2 91 70-177 9-104 (234)
487 3k6j_A Protein F01G10.3, confi 74.2 38 0.0013 28.5 11.2 97 70-175 54-163 (460)
488 3rkr_A Short chain oxidoreduct 73.9 11 0.00038 28.7 7.1 78 69-151 28-116 (262)
489 2hjr_A Malate dehydrogenase; m 73.9 32 0.0011 27.4 10.1 100 71-177 15-130 (328)
490 3gt0_A Pyrroline-5-carboxylate 73.8 3.5 0.00012 31.3 4.1 85 71-174 3-93 (247)
491 3tri_A Pyrroline-5-carboxylate 73.4 12 0.0004 29.1 7.1 87 71-174 4-94 (280)
492 4f6l_B AUSA reductase domain p 73.3 29 0.00098 29.4 10.1 80 71-151 151-241 (508)
493 3e48_A Putative nucleoside-dip 73.3 15 0.00052 28.2 7.8 96 72-178 2-105 (289)
494 1f0y_A HCDH, L-3-hydroxyacyl-C 73.2 11 0.00037 29.6 7.0 96 71-174 16-132 (302)
495 3guy_A Short-chain dehydrogena 73.2 25 0.00086 25.9 10.5 73 72-152 3-83 (230)
496 4hp8_A 2-deoxy-D-gluconate 3-d 73.2 24 0.00082 26.9 8.6 76 70-152 9-90 (247)
497 3jyo_A Quinate/shikimate dehyd 72.9 10 0.00036 29.5 6.7 80 67-152 124-205 (283)
498 3imf_A Short chain dehydrogena 72.3 12 0.00042 28.4 6.9 77 70-151 6-93 (257)
499 4e21_A 6-phosphogluconate dehy 72.2 7.7 0.00026 31.5 5.9 88 70-174 22-111 (358)
500 3trk_A Nonstructural polyprote 72.1 3.9 0.00013 31.5 3.8 45 140-184 210-265 (324)
No 1
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.95 E-value=1.7e-26 Score=182.69 Aligned_cols=184 Identities=14% Similarity=0.192 Sum_probs=132.7
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhC-CCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEE
Q 025144 67 AKTGDNVLDVCCGSGDLSFLLSEQVG-SQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAI 145 (257)
Q Consensus 67 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v 145 (257)
..++.+|||+|||+|..+..+++.+. ++.+|+|+|+|+.|++.|+++++..+.. .+++++++|+.++++ +.||+|
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~--~~v~~~~~D~~~~~~--~~~d~v 143 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAP--TPVDVIEGDIRDIAI--ENASMV 143 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCS--SCEEEEESCTTTCCC--CSEEEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccC--ceEEEeecccccccc--cccccc
Confidence 56888999999999999999998753 4679999999999999999998765433 589999999998875 469999
Q ss_pred EecccccCccc--HHHHHHHHHhcccCCCEEEEEeecCCCchhHHH-HHHHHHhhhhhhhhccCC-chhhhhhhHHHHhc
Q 025144 146 TMGYGLRNVVD--KRKALEESFRVLKPGSRISVLDFNKSTQPFTTA-IQEWMIDNVVVPVASGYG-LAEEYQYLKSSIRE 221 (257)
Q Consensus 146 ~~~~~l~~~~~--~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 221 (257)
++.++++++++ ...+|++++++|||||.+++.+........... ...++.... ...+... ..............
T Consensus 144 ~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~~~~~~~~~~~~--~~~g~s~~ei~~~~~~l~~~~~ 221 (261)
T 4gek_A 144 VLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFNMHHDFK--RANGYSELEISQKRSMLENVML 221 (261)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHHHHHHHHHHHHH--HHTTGGGSTTHHHHHHHHHHCC
T ss_pred eeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHHHHHHHHHHHHH--HHcCCCHHHHHHHHhhhccccc
Confidence 99999999964 467899999999999999999887766544322 222221111 0001000 00011111223445
Q ss_pred cCCHHHHHHHHHHcCceeeEEeeecCceeEEEeeeC
Q 025144 222 FLTGKDLEKLALEIGFSRAKHYELSGGLMGNLVATR 257 (257)
Q Consensus 222 ~~~~~~~~~~l~~~Gf~~~~~~~~~~g~~~~~~~~k 257 (257)
.++.+++.++|+++||+.++.+-... .+..++|+|
T Consensus 222 ~~s~~~~~~~L~~AGF~~ve~~fq~~-nF~~~iA~K 256 (261)
T 4gek_A 222 TDSVETHKARLHKAGFEHSELWFQCF-NFGSLVALK 256 (261)
T ss_dssp CBCHHHHHHHHHHHTCSEEEEEEEET-TEEEEEEEC
T ss_pred CCCHHHHHHHHHHcCCCeEEEEEEec-cEEEEEEEE
Confidence 67999999999999999888654322 355667776
No 2
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.95 E-value=2.5e-26 Score=179.51 Aligned_cols=210 Identities=19% Similarity=0.236 Sum_probs=151.0
Q ss_pred hhHHHHhhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhC-CCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHH
Q 025144 29 SERQELFSRIAPVYDNLNDLLSFGQHRIWKRMAVSWSG-AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQL 107 (257)
Q Consensus 29 ~~~~~~y~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~ 107 (257)
+.++++|+..+..|+.............+ +.+...+. ..++.+|||+|||+|..+..+++.. ++.+++++|+|+.++
T Consensus 4 ~~~~~~f~~~a~~y~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~ 81 (234)
T 3dtn_A 4 SEIKRKFDAVSGKYDEQRRKFIPCFDDFY-GVSVSIASVDTENPDILDLGAGTGLLSAFLMEKY-PEATFTLVDMSEKML 81 (234)
T ss_dssp CSSCCCCCHHHHHHHHHHHHHCTTHHHHH-HHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHC-TTCEEEEEESCHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHhCcCHHHHH-HHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhC-CCCeEEEEECCHHHH
Confidence 45677899999999887664443334444 44444443 5677899999999999999999985 678999999999999
Q ss_pred HHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEecccccCcccHH--HHHHHHHhcccCCCEEEEEeecCCCch
Q 025144 108 SMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGYGLRNVVDKR--KALEESFRVLKPGSRISVLDFNKSTQP 185 (257)
Q Consensus 108 ~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~--~~l~~~~~~Lk~gG~l~~~~~~~~~~~ 185 (257)
+.++++.... .++.++++|+.+++++ ++||+|++..+++++++.. .++++++++|||||.+++.+...+...
T Consensus 82 ~~a~~~~~~~-----~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~ 155 (234)
T 3dtn_A 82 EIAKNRFRGN-----LKVKYIEADYSKYDFE-EKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGETA 155 (234)
T ss_dssp HHHHHHTCSC-----TTEEEEESCTTTCCCC-SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSH
T ss_pred HHHHHhhccC-----CCEEEEeCchhccCCC-CCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCh
Confidence 9999987543 3899999999998876 8999999999999998655 599999999999999999998876655
Q ss_pred hHHHHHHHHHhhhhhhhhccCCchhhhh-hhHHHHhccCCHHHHHHHHHHcCceeeEEeeecCc
Q 025144 186 FTTAIQEWMIDNVVVPVASGYGLAEEYQ-YLKSSIREFLTGKDLEKLALEIGFSRAKHYELSGG 248 (257)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~g 248 (257)
................ .......... .........++.+++.++|+++||++++.+....+
T Consensus 156 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~~~~~ 217 (234)
T 3dtn_A 156 FIENLNKTIWRQYVEN--SGLTEEEIAAGYERSKLDKDIEMNQQLNWLKEAGFRDVSCIYKYYQ 217 (234)
T ss_dssp HHHHHHHHHHHHHHHT--SSCCHHHHHTTC----CCCCCBHHHHHHHHHHTTCEEEEEEEEETT
T ss_pred hhhhHHHHHHHHHHHh--cCCCHHHHHHHHHhcccccccCHHHHHHHHHHcCCCceeeeeeecc
Confidence 4332222111111100 0000000000 01112345679999999999999999988766444
No 3
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.94 E-value=2e-25 Score=172.35 Aligned_cols=182 Identities=22% Similarity=0.243 Sum_probs=136.8
Q ss_pred HHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCC
Q 025144 54 HRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDAL 133 (257)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~ 133 (257)
...+.+.+...+...++ +|||+|||+|..+..+++. ++.+++++|+|+.+++.+++++...+.. .++.++++|+.
T Consensus 29 ~~~~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~~~--~~~~~~~~d~~ 103 (219)
T 3dlc_A 29 YPIIAENIINRFGITAG-TCIDIGSGPGALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADANLN--DRIQIVQGDVH 103 (219)
T ss_dssp HHHHHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTTCT--TTEEEEECBTT
T ss_pred cHHHHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhcccc--CceEEEEcCHH
Confidence 44455666666666666 9999999999999999987 5679999999999999999998765432 58999999999
Q ss_pred CCCCCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhh
Q 025144 134 DLPFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQ 213 (257)
Q Consensus 134 ~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (257)
++++++++||+|++..+++|++++..++++++++|||||.+++.+...... ............. ..+.
T Consensus 104 ~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~-~~~~~~~~~~~~~-----------~~~~ 171 (219)
T 3dlc_A 104 NIPIEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFGNKE-LRDSISAEMIRKN-----------PDWK 171 (219)
T ss_dssp BCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECCSSHH-HHHHHHHHHHHHC-----------TTHH
T ss_pred HCCCCcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEeccCcHH-HHHHHHHHHHHhH-----------HHHH
Confidence 988888999999999999999999999999999999999999887554331 1111111111000 0011
Q ss_pred hhHHHHhccCCHHHHHHHHHHcCceeeEEeeecCceeEE
Q 025144 214 YLKSSIREFLTGKDLEKLALEIGFSRAKHYELSGGLMGN 252 (257)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~g~~~~ 252 (257)
.........++.+++.++|+++||++++......+.+.+
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~~~~~ 210 (219)
T 3dlc_A 172 EFNRKNISQENVERFQNVLDEIGISSYEIILGDEGFWII 210 (219)
T ss_dssp HHHHHHSSHHHHHHHHHHHHHHTCSSEEEEEETTEEEEE
T ss_pred hhhhhccccCCHHHHHHHHHHcCCCeEEEEecCCceEEE
Confidence 111122345578999999999999999988776665443
No 4
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.94 E-value=2.6e-25 Score=172.09 Aligned_cols=192 Identities=20% Similarity=0.207 Sum_probs=125.3
Q ss_pred hhHHHHhhhhhhhhhhhhhhhhhhh---HHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChh
Q 025144 29 SERQELFSRIAPVYDNLNDLLSFGQ---HRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKN 105 (257)
Q Consensus 29 ~~~~~~y~~~a~~y~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~ 105 (257)
++..++|+.++..|+.......... ...+. .++..+...++.+|||+|||+|.++..+++. +.+++++|+|+.
T Consensus 3 ~~~~~~f~~~a~~y~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~ 78 (220)
T 3hnr_A 3 TEFNGLFDEWAHTYDSFVQGEDIQYKEVFAHYE-DILEDVVNKSFGNVLEFGVGTGNLTNKLLLA---GRTVYGIEPSRE 78 (220)
T ss_dssp ---------------------CCTTTTTTTTHH-HHHHHHHHTCCSEEEEECCTTSHHHHHHHHT---TCEEEEECSCHH
T ss_pred hhHHHHHHHHHHHHHHHhhcchHhHHHHHHHHH-HHHHHhhccCCCeEEEeCCCCCHHHHHHHhC---CCeEEEEeCCHH
Confidence 4566789999999988653221111 11122 2333333457789999999999999999876 579999999999
Q ss_pred HHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEecccccCcccHHH--HHHHHHhcccCCCEEEEEeecCCC
Q 025144 106 QLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGYGLRNVVDKRK--ALEESFRVLKPGSRISVLDFNKST 183 (257)
Q Consensus 106 ~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~--~l~~~~~~Lk~gG~l~~~~~~~~~ 183 (257)
+++.++++.. .++.++++|+.+++++ ++||+|++..+++++++... ++++++++|||||.+++.++....
T Consensus 79 ~~~~a~~~~~-------~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 150 (220)
T 3hnr_A 79 MRMIAKEKLP-------KEFSITEGDFLSFEVP-TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFAD 150 (220)
T ss_dssp HHHHHHHHSC-------TTCCEESCCSSSCCCC-SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSS
T ss_pred HHHHHHHhCC-------CceEEEeCChhhcCCC-CCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccC
Confidence 9999998863 3899999999998877 89999999999999998776 999999999999999999877655
Q ss_pred chhHHHHHHHHHhhhhhhhhccCCchhhhhhhHHH--HhccCCHHHHHHHHHHcCceeeEEeee
Q 025144 184 QPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSS--IREFLTGKDLEKLALEIGFSRAKHYEL 245 (257)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 245 (257)
............. ..+...... ...+++.+++.++|+++||+++.....
T Consensus 151 ~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~~~ 201 (220)
T 3hnr_A 151 QDAYDKTVEAAKQ-------------RGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTFTRLN 201 (220)
T ss_dssp HHHHHHHHHHHHH-------------TTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEEEECS
T ss_pred hHHHHHHHHHHHh-------------CCCccchhhcchhhcCCHHHHHHHHHHCCCEEEEeecc
Confidence 4433333222221 111111111 123558999999999999987766544
No 5
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.93 E-value=4.9e-24 Score=164.77 Aligned_cols=165 Identities=24% Similarity=0.324 Sum_probs=135.5
Q ss_pred HHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCC
Q 025144 59 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFS 138 (257)
Q Consensus 59 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 138 (257)
..+...+...++.+|||+|||+|..+..+++..++..+++++|+|+.+++.++++....+. .++.++.+|+.+++++
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~~~~~~~d~~~~~~~ 103 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGL---KNVEVLKSEENKIPLP 103 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTC---TTEEEEECBTTBCSSC
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC---CcEEEEecccccCCCC
Confidence 3455556778888999999999999999999865678999999999999999998865542 4799999999998888
Q ss_pred CCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHHH
Q 025144 139 DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSS 218 (257)
Q Consensus 139 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (257)
+++||+|++..++++++++..+++++.++|||||.+++.++......... .
T Consensus 104 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~-----------------------------~ 154 (219)
T 3dh0_A 104 DNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGP-----------------------------P 154 (219)
T ss_dssp SSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSC-----------------------------C
T ss_pred CCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEecccccccCC-----------------------------c
Confidence 88999999999999999999999999999999999999887755431100 0
Q ss_pred HhccCCHHHHHHHHHHcCceeeEEeeecCceeEEEeee
Q 025144 219 IREFLTGKDLEKLALEIGFSRAKHYELSGGLMGNLVAT 256 (257)
Q Consensus 219 ~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~g~~~~~~~~ 256 (257)
..+.++.+++.++++++||++++........+ .++++
T Consensus 155 ~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~-~~~~~ 191 (219)
T 3dh0_A 155 PEEVYSEWEVGLILEDAGIRVGRVVEVGKYCF-GVYAM 191 (219)
T ss_dssp GGGSCCHHHHHHHHHHTTCEEEEEEEETTTEE-EEEEE
T ss_pred hhcccCHHHHHHHHHHCCCEEEEEEeeCCceE-EEEEE
Confidence 12356899999999999999999888755443 34444
No 6
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.92 E-value=8.8e-24 Score=168.78 Aligned_cols=196 Identities=21% Similarity=0.315 Sum_probs=134.7
Q ss_pred chhHHHHhhhhhhhhhhhhhhh--------------hhhhHHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCC
Q 025144 28 SSERQELFSRIAPVYDNLNDLL--------------SFGQHRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGS 93 (257)
Q Consensus 28 ~~~~~~~y~~~a~~y~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~ 93 (257)
.+.++++||..++.|+...... .........+.+...+...++.+|||||||+|..+..+++..
T Consensus 6 ~~~~~~~Yd~~~~~y~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-- 83 (273)
T 3bus_A 6 PEEVRQMYDDFTDPFARIWGENLHFGYWEDAGADVSVDDATDRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATAR-- 83 (273)
T ss_dssp -----------------CCGGGCCCCCCCCSSCCCCHHHHHHHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHS--
T ss_pred HHHHHHHHcchHHHHHHHcCCCceEEecCCCccccCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc--
Confidence 5567778887777776542211 011233444556666777888999999999999999999874
Q ss_pred CceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEecccccCcccHHHHHHHHHhcccCCCE
Q 025144 94 QGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSR 173 (257)
Q Consensus 94 ~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~ 173 (257)
+.+++++|+|+.+++.++++....+.. .++.+..+|+.++++++++||+|++..+++|++++..++++++++|||||.
T Consensus 84 ~~~v~gvD~s~~~~~~a~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~ 161 (273)
T 3bus_A 84 DVRVTGISISRPQVNQANARATAAGLA--NRVTFSYADAMDLPFEDASFDAVWALESLHHMPDRGRALREMARVLRPGGT 161 (273)
T ss_dssp CCEEEEEESCHHHHHHHHHHHHHTTCT--TTEEEEECCTTSCCSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEE
T ss_pred CCEEEEEeCCHHHHHHHHHHHHhcCCC--cceEEEECccccCCCCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeE
Confidence 579999999999999999987654432 479999999999888888999999999999999999999999999999999
Q ss_pred EEEEeecCCCchh--HHHHHHHHHhhhhhhhhccCCchhhhhhhHHHHhccCCHHHHHHHHHHcCceeeEEeeec
Q 025144 174 ISVLDFNKSTQPF--TTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYELS 246 (257)
Q Consensus 174 l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 246 (257)
+++.++....... .......+... .....+++.+++.++++++||++++.....
T Consensus 162 l~i~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 217 (273)
T 3bus_A 162 VAIADFVLLAPVEGAKKEAVDAFRAG-------------------GGVLSLGGIDEYESDVRQAELVVTSTVDIS 217 (273)
T ss_dssp EEEEEEEESSCCCHHHHHHHHHHHHH-------------------HTCCCCCCHHHHHHHHHHTTCEEEEEEECH
T ss_pred EEEEEeeccCCCChhHHHHHHHHHhh-------------------cCccCCCCHHHHHHHHHHcCCeEEEEEECc
Confidence 9998876433211 11111111000 011246789999999999999999877654
No 7
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.92 E-value=2e-25 Score=170.69 Aligned_cols=187 Identities=14% Similarity=0.091 Sum_probs=142.0
Q ss_pred chhHHHHhhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHH
Q 025144 28 SSERQELFSRIAPVYDNLNDLLSFGQHRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQL 107 (257)
Q Consensus 28 ~~~~~~~y~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~ 107 (257)
++.++++|+..+..|+........ ....+...+..+.... +.+|||+|||+|.++..+++. +.+++++|+|+.++
T Consensus 2 ~~~~~~~y~~~a~~y~~~~~~~~~-~~~~~~~~l~~~~~~~-~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~ 76 (203)
T 3h2b_A 2 TDDVSKAYSSPTFDAEALLGTVIS-AEDPDRVLIEPWATGV-DGVILDVGSGTGRWTGHLASL---GHQIEGLEPATRLV 76 (203)
T ss_dssp CCHHHHHHHCTTTCHHHHTCSSCC-TTCTTHHHHHHHHHHC-CSCEEEETCTTCHHHHHHHHT---TCCEEEECCCHHHH
T ss_pred HHHHHHHHhhHHHHHHHHhhhhcc-ccHHHHHHHHHHhccC-CCeEEEecCCCCHHHHHHHhc---CCeEEEEeCCHHHH
Confidence 467899999999999776432211 1112223333333222 679999999999999999876 46999999999999
Q ss_pred HHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEecccccCcc--cHHHHHHHHHhcccCCCEEEEEeecCCCch
Q 025144 108 SMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGYGLRNVV--DKRKALEESFRVLKPGSRISVLDFNKSTQP 185 (257)
Q Consensus 108 ~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~--~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~ 185 (257)
+.++++. +++.++++|+.++++++++||+|++..+++|++ ++..++++++++|||||.+++.++......
T Consensus 77 ~~a~~~~--------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~ 148 (203)
T 3h2b_A 77 ELARQTH--------PSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSGPSLE 148 (203)
T ss_dssp HHHHHHC--------TTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSSCE
T ss_pred HHHHHhC--------CCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCchh
Confidence 9999874 689999999999887789999999999999996 899999999999999999999887654411
Q ss_pred hHHHHHHHHHhhhhhhhhccCCchhhhhhhHHHHhccCCHHHHHHHHHHcCceeeEEeeecCceeEEE
Q 025144 186 FTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYELSGGLMGNL 253 (257)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~g~~~~~ 253 (257)
... ... ....+++.+++.++|+++||++++...........+
T Consensus 149 ~~~---------------~~~-----------~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~p~~~l 190 (203)
T 3h2b_A 149 PMY---------------HPV-----------ATAYRWPLPELAQALETAGFQVTSSHWDPRFPHAYL 190 (203)
T ss_dssp EEC---------------CSS-----------SCEEECCHHHHHHHHHHTTEEEEEEEECTTSSEEEE
T ss_pred hhh---------------chh-----------hhhccCCHHHHHHHHHHCCCcEEEEEecCCCcchhh
Confidence 000 000 011356899999999999999999887765433333
No 8
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.92 E-value=1.3e-23 Score=169.83 Aligned_cols=195 Identities=18% Similarity=0.134 Sum_probs=144.3
Q ss_pred chhHHHHhhhh--hhhhhhhhh-------hh--------hhhhHHHHHHHHHhhh----CCCCCCeEEEecCCCChhHHH
Q 025144 28 SSERQELFSRI--APVYDNLND-------LL--------SFGQHRIWKRMAVSWS----GAKTGDNVLDVCCGSGDLSFL 86 (257)
Q Consensus 28 ~~~~~~~y~~~--a~~y~~~~~-------~~--------~~~~~~~~~~~~~~~~----~~~~~~~vLdiG~G~G~~~~~ 86 (257)
.+.++++||.. .+.|+.... .. .........+.+...+ ...++.+|||+|||+|..+..
T Consensus 20 ~~~~~~~Yd~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~ 99 (297)
T 2o57_A 20 KDNAEIYYDDDDSDRFYFHVWGGEDIHVGLYKEPVDQDEIREASLRTDEWLASELAMTGVLQRQAKGLDLGAGYGGAARF 99 (297)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHTTSCCCSCCCCSSGGGSCHHHHHHHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHH
T ss_pred HHHHHHHcCCccchhHHHHHhCCCceEEEecCCCCCCcchHHHHHHHHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHH
Confidence 45678888876 366654321 00 0011233334455555 778889999999999999999
Q ss_pred HHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEecccccCcccHHHHHHHHHh
Q 025144 87 LSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGYGLRNVVDKRKALEESFR 166 (257)
Q Consensus 87 l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~ 166 (257)
+++.+ +.+++++|+|+.+++.++++....+.. .++.++.+|+.++++++++||+|++..+++|++++..+++++++
T Consensus 100 l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~ 175 (297)
T 2o57_A 100 LVRKF--GVSIDCLNIAPVQNKRNEEYNNQAGLA--DNITVKYGSFLEIPCEDNSYDFIWSQDAFLHSPDKLKVFQECAR 175 (297)
T ss_dssp HHHHH--CCEEEEEESCHHHHHHHHHHHHHHTCT--TTEEEEECCTTSCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHH
T ss_pred HHHHh--CCEEEEEeCCHHHHHHHHHHHHhcCCC--cceEEEEcCcccCCCCCCCEeEEEecchhhhcCCHHHHHHHHHH
Confidence 99885 469999999999999999987655432 57999999999988888999999999999999999999999999
Q ss_pred cccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHHHHhccCCHHHHHHHHHHcCceeeEEeeec
Q 025144 167 VLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYELS 246 (257)
Q Consensus 167 ~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 246 (257)
+|||||.+++.++.............+.... ....+.+..++.++++++||++++.....
T Consensus 176 ~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 235 (297)
T 2o57_A 176 VLKPRGVMAITDPMKEDGIDKSSIQPILDRI--------------------KLHDMGSLGLYRSLAKECGLVTLRTFSRP 235 (297)
T ss_dssp HEEEEEEEEEEEEEECTTCCGGGGHHHHHHH--------------------TCSSCCCHHHHHHHHHHTTEEEEEEEECH
T ss_pred HcCCCeEEEEEEeccCCCCchHHHHHHHHHh--------------------cCCCCCCHHHHHHHHHHCCCeEEEEEECc
Confidence 9999999999887654322111111111100 00124588999999999999999887653
No 9
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.92 E-value=4.3e-24 Score=167.55 Aligned_cols=188 Identities=21% Similarity=0.287 Sum_probs=126.9
Q ss_pred CchhHHHHhhhhhhhhhhhhhh-hhhhhHHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChh
Q 025144 27 CSSERQELFSRIAPVYDNLNDL-LSFGQHRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKN 105 (257)
Q Consensus 27 ~~~~~~~~y~~~a~~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~ 105 (257)
..+..+++|+..+..|+..... ........+...+...+ .++.+|||+|||+|..+..+++. +.+++++|+|+.
T Consensus 12 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~ 86 (242)
T 3l8d_A 12 WHESAEKKWDSSAEFWNQNSQEMWDSGSRSTIIPFFEQYV--KKEAEVLDVGCGDGYGTYKLSRT---GYKAVGVDISEV 86 (242)
T ss_dssp --------------------CHHHHTSTTTTHHHHHHHHS--CTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHH
T ss_pred hHHHHHHHHHhHHHHhhhhhhhccCcccHHHHHHHHHHHc--CCCCeEEEEcCCCCHHHHHHHHc---CCeEEEEECCHH
Confidence 3566888999998888875332 11122233344444443 46789999999999999999886 569999999999
Q ss_pred HHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeecCCCch
Q 025144 106 QLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQP 185 (257)
Q Consensus 106 ~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~ 185 (257)
+++.++++... .++.++++|+.++++++++||+|++..+++|++++..++++++++|+|||.+++.++......
T Consensus 87 ~~~~a~~~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~ 160 (242)
T 3l8d_A 87 MIQKGKERGEG------PDLSFIKGDLSSLPFENEQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAILGPTAKP 160 (242)
T ss_dssp HHHHHHTTTCB------TTEEEEECBTTBCSSCTTCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEECTTCGG
T ss_pred HHHHHHhhccc------CCceEEEcchhcCCCCCCCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEEcCCcchh
Confidence 99999987521 689999999999888889999999999999999999999999999999999999887654433
Q ss_pred hHHHHHHHHHhhhhhhhhccCCchhhhhhhHHHHhccCCHHHHHHHHHHcCceeeEEeee
Q 025144 186 FTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYEL 245 (257)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 245 (257)
.......... . ......++.+++.++++++||++++....
T Consensus 161 ~~~~~~~~~~------------~--------~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 200 (242)
T 3l8d_A 161 RENSYPRLYG------------K--------DVVCNTMMPWEFEQLVKEQGFKVVDGIGV 200 (242)
T ss_dssp GGGGGGGGGT------------C--------CCSSCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred hhhhhhhhcc------------c--------cccccCCCHHHHHHHHHHcCCEEEEeecc
Confidence 2111110000 0 00123578899999999999999987754
No 10
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.91 E-value=2e-23 Score=166.25 Aligned_cols=185 Identities=19% Similarity=0.264 Sum_probs=137.9
Q ss_pred hhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhC-CCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhh
Q 025144 35 FSRIAPVYDNLNDLLSFGQHRIWKRMAVSWSG-AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSR 113 (257)
Q Consensus 35 y~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~ 113 (257)
++..+..|+....... ........++..+. ..++.+|||||||+|..+..+++. +..+|+++|+|+.+++.++++
T Consensus 13 ~~~~~~~~~~~~~~~~--~~~~~~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~ 88 (267)
T 3kkz_A 13 LNLICDFFSNMERQGP--GSPEVTLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGH--VTGQVTGLDFLSGFIDIFNRN 88 (267)
T ss_dssp HHHHHHHHHTSSCSSS--CCHHHHHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTT--CSSEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHhhccccCC--CCHHHHHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhc--cCCEEEEEeCCHHHHHHHHHH
Confidence 3446666666543221 12222333444443 678889999999999999999987 466999999999999999998
Q ss_pred hhhhhhccCCCeeEEEccCCCCCCCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHH
Q 025144 114 QDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEW 193 (257)
Q Consensus 114 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~ 193 (257)
.+..+.. +++.++++|+.++++++++||+|++..+++++ ++..+++++.++|||||.+++.+...............
T Consensus 89 ~~~~~~~--~~v~~~~~d~~~~~~~~~~fD~i~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~ 165 (267)
T 3kkz_A 89 ARQSGLQ--NRVTGIVGSMDDLPFRNEELDLIWSEGAIYNI-GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDF 165 (267)
T ss_dssp HHHTTCT--TTEEEEECCTTSCCCCTTCEEEEEESSCGGGT-CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHH
T ss_pred HHHcCCC--cCcEEEEcChhhCCCCCCCEEEEEEcCCceec-CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHH
Confidence 8665432 57999999999988888999999999999999 89999999999999999999988764332222222222
Q ss_pred HHhhhhhhhhccCCchhhhhhhHHHHhccCCHHHHHHHHHHcCceeeEEeeecC
Q 025144 194 MIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYELSG 247 (257)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 247 (257)
+.. ....+.+.+++.++++++||++++...+..
T Consensus 166 ~~~---------------------~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~ 198 (267)
T 3kkz_A 166 WMD---------------------AYPEIDTIPNQVAKIHKAGYLPVATFILPE 198 (267)
T ss_dssp HHH---------------------HCTTCEEHHHHHHHHHHTTEEEEEEEECCG
T ss_pred HHH---------------------hCCCCCCHHHHHHHHHHCCCEEEEEEECCH
Confidence 210 111355889999999999999998877653
No 11
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.91 E-value=3.7e-23 Score=159.64 Aligned_cols=197 Identities=17% Similarity=0.170 Sum_probs=136.6
Q ss_pred chhHHHHhhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHH
Q 025144 28 SSERQELFSRIAPVYDNLNDLLSFGQHRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQL 107 (257)
Q Consensus 28 ~~~~~~~y~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~ 107 (257)
.+...++|+..+..|+........ ......+..+....++.+|||+|||+|.++..+++. +.+++++|+|+.++
T Consensus 8 ~~~~~~~~~~~a~~y~~~~~~~~~---~~~~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s~~~~ 81 (218)
T 3ou2_A 8 IESQLSYYRARASEYDATFVPYMD---SAAPAALERLRAGNIRGDVLELASGTGYWTRHLSGL---ADRVTALDGSAEMI 81 (218)
T ss_dssp HHHHHHHHHHHGGGHHHHHHHHHT---TTHHHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHH---SSEEEEEESCHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHH---HHHHHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhc---CCeEEEEeCCHHHH
Confidence 466788999999999885432211 112222222334677789999999999999999987 56999999999999
Q ss_pred HHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEecccccCcccH--HHHHHHHHhcccCCCEEEEEeecCCCch
Q 025144 108 SMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGYGLRNVVDK--RKALEESFRVLKPGSRISVLDFNKSTQP 185 (257)
Q Consensus 108 ~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~--~~~l~~~~~~Lk~gG~l~~~~~~~~~~~ 185 (257)
+.+++. + ..++.++++|+.++ +++++||+|++..+++++++. ..++++++++|||||.+++.+++.+...
T Consensus 82 ~~a~~~----~---~~~~~~~~~d~~~~-~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~ 153 (218)
T 3ou2_A 82 AEAGRH----G---LDNVEFRQQDLFDW-TPDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHERR 153 (218)
T ss_dssp HHHGGG----C---CTTEEEEECCTTSC-CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC--
T ss_pred HHHHhc----C---CCCeEEEecccccC-CCCCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccc
Confidence 999882 1 15899999999987 677899999999999999875 8899999999999999999988875433
Q ss_pred hHHHHHHHHHhhhhhhhhccCCchhhhhhhHHHHhccCCHHHHHHHHHHcCceeeEEeeec
Q 025144 186 FTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYELS 246 (257)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 246 (257)
........... ...........|. ....+++.+++.++++++||++.......
T Consensus 154 ~~~~~~~~~~~----~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~aGf~v~~~~~~~ 206 (218)
T 3ou2_A 154 LEQQDDSEPEV----AVRRTLQDGRSFR----IVKVFRSPAELTERLTALGWSCSVDEVHP 206 (218)
T ss_dssp ----------C----EEEEECTTSCEEE----EECCCCCHHHHHHHHHHTTEEEEEEEEET
T ss_pred cchhhhccccc----ceeeecCCcchhh----HhhcCCCHHHHHHHHHHCCCEEEeeeccc
Confidence 22211111110 0000000000010 11235699999999999999966555443
No 12
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.91 E-value=1.8e-23 Score=165.83 Aligned_cols=163 Identities=22% Similarity=0.328 Sum_probs=127.6
Q ss_pred HHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCC
Q 025144 60 MAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSD 139 (257)
Q Consensus 60 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 139 (257)
.+...+...++.+|||+|||+|.++..+++.. .+++++|+|+.|++.++++....+. +++.++.+|+.++++++
T Consensus 28 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~---~~v~~~~~d~~~l~~~~ 101 (260)
T 1vl5_A 28 KLMQIAALKGNEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNGH---QQVEYVQGDAEQMPFTD 101 (260)
T ss_dssp HHHHHHTCCSCCEEEEETCTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTC---CSEEEEECCC-CCCSCT
T ss_pred HHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcCC---CceEEEEecHHhCCCCC
Confidence 34445566788899999999999999998773 4999999999999999988765432 47999999999988888
Q ss_pred CcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHHHH
Q 025144 140 CFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSI 219 (257)
Q Consensus 140 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (257)
++||+|++..+++|++++..++++++++|||||.+++.+...+..+....+...... . . . ...
T Consensus 102 ~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~-~--~--~------------~~~ 164 (260)
T 1vl5_A 102 ERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVEK-E--R--D------------YSH 164 (260)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHHHHH-H--H--C------------TTC
T ss_pred CCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHHHHH-h--c--C------------ccc
Confidence 999999999999999999999999999999999999988776555433222211110 0 0 0 001
Q ss_pred hccCCHHHHHHHHHHcCceeeEEeee
Q 025144 220 REFLTGKDLEKLALEIGFSRAKHYEL 245 (257)
Q Consensus 220 ~~~~~~~~~~~~l~~~Gf~~~~~~~~ 245 (257)
.+.++.+++.++|+++||+++....+
T Consensus 165 ~~~~~~~~~~~~l~~aGf~~~~~~~~ 190 (260)
T 1vl5_A 165 HRAWKKSDWLKMLEEAGFELEELHCF 190 (260)
T ss_dssp CCCCBHHHHHHHHHHHTCEEEEEEEE
T ss_pred cCCCCHHHHHHHHHHCCCeEEEEEEe
Confidence 24568899999999999998877665
No 13
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.91 E-value=7.2e-23 Score=162.01 Aligned_cols=162 Identities=20% Similarity=0.320 Sum_probs=127.7
Q ss_pred HHhhh-CCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCC
Q 025144 61 AVSWS-GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSD 139 (257)
Q Consensus 61 ~~~~~-~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 139 (257)
++..+ ...++.+|||+|||+|..+..+++.. + .+|+++|+|+.+++.++++....+.. .++.++++|+.++++++
T Consensus 37 ~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~-~-~~v~~vD~s~~~~~~a~~~~~~~~~~--~~~~~~~~d~~~~~~~~ 112 (257)
T 3f4k_A 37 AVSFINELTDDAKIADIGCGTGGQTLFLADYV-K-GQITGIDLFPDFIEIFNENAVKANCA--DRVKGITGSMDNLPFQN 112 (257)
T ss_dssp HHTTSCCCCTTCEEEEETCTTSHHHHHHHHHC-C-SEEEEEESCHHHHHHHHHHHHHTTCT--TTEEEEECCTTSCSSCT
T ss_pred HHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhC-C-CeEEEEECCHHHHHHHHHHHHHcCCC--CceEEEECChhhCCCCC
Confidence 34443 66778899999999999999999984 3 49999999999999999988765432 46999999999988888
Q ss_pred CcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHHHH
Q 025144 140 CFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSI 219 (257)
Q Consensus 140 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (257)
++||+|++..+++++ ++..+++++.++|||||.+++.+...............+.. ..
T Consensus 113 ~~fD~v~~~~~l~~~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~---------------------~~ 170 (257)
T 3f4k_A 113 EELDLIWSEGAIYNI-GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMD---------------------AY 170 (257)
T ss_dssp TCEEEEEEESCSCCC-CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHH---------------------HC
T ss_pred CCEEEEEecChHhhc-CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHH---------------------hC
Confidence 999999999999999 78999999999999999999988653332222222222111 11
Q ss_pred hccCCHHHHHHHHHHcCceeeEEeeecCc
Q 025144 220 REFLTGKDLEKLALEIGFSRAKHYELSGG 248 (257)
Q Consensus 220 ~~~~~~~~~~~~l~~~Gf~~~~~~~~~~g 248 (257)
..+.+.+++.++++++||++++.......
T Consensus 171 ~~~~~~~~~~~~l~~aGf~~v~~~~~~~~ 199 (257)
T 3f4k_A 171 PEISVIPTCIDKMERAGYTPTAHFILPEN 199 (257)
T ss_dssp TTCCBHHHHHHHHHHTTEEEEEEEECCGG
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEEECChh
Confidence 23568899999999999999998766543
No 14
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.91 E-value=5.6e-23 Score=161.00 Aligned_cols=166 Identities=23% Similarity=0.289 Sum_probs=132.0
Q ss_pred HHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC
Q 025144 57 WKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP 136 (257)
Q Consensus 57 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~ 136 (257)
....+...+...++.+|||+|||+|..+..+++. ..+++++|+|+.+++.++++....+. +++.++++|+.+++
T Consensus 9 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~---~~v~~~~~d~~~~~ 82 (239)
T 1xxl_A 9 SLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPY---VQECIGVDATKEMVEVASSFAQEKGV---ENVRFQQGTAESLP 82 (239)
T ss_dssp HHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHHTC---CSEEEEECBTTBCC
T ss_pred CcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCC---CCeEEEecccccCC
Confidence 3455666778889999999999999999999876 35999999999999999998765432 47999999999988
Q ss_pred CCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhH
Q 025144 137 FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLK 216 (257)
Q Consensus 137 ~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (257)
+++++||+|++..+++|++++..++++++++|||||.+++.+...+.......+...... ...
T Consensus 83 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~---~~~-------------- 145 (239)
T 1xxl_A 83 FPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNHLNR---LRD-------------- 145 (239)
T ss_dssp SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHH---HHC--------------
T ss_pred CCCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHHHHHH---hcc--------------
Confidence 888999999999999999999999999999999999999988776655433222221110 000
Q ss_pred HHHhccCCHHHHHHHHHHcCceeeEEeee
Q 025144 217 SSIREFLTGKDLEKLALEIGFSRAKHYEL 245 (257)
Q Consensus 217 ~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 245 (257)
....+.++.+++.++|+++||+++....+
T Consensus 146 ~~~~~~~~~~~~~~ll~~aGf~~~~~~~~ 174 (239)
T 1xxl_A 146 PSHVRESSLSEWQAMFSANQLAYQDIQKW 174 (239)
T ss_dssp TTCCCCCBHHHHHHHHHHTTEEEEEEEEE
T ss_pred ccccCCCCHHHHHHHHHHCCCcEEEEEee
Confidence 00124568899999999999998887765
No 15
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.90 E-value=8.1e-23 Score=162.44 Aligned_cols=162 Identities=19% Similarity=0.297 Sum_probs=131.9
Q ss_pred HHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC
Q 025144 57 WKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP 136 (257)
Q Consensus 57 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~ 136 (257)
..+.+...+...++.+|||+|||+|..+..+++.+ +.+|+++|+|+.+++.++++.... .++.++++|+.+++
T Consensus 43 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~~~~~ 115 (266)
T 3ujc_A 43 ATKKILSDIELNENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGN-----NKIIFEANDILTKE 115 (266)
T ss_dssp HHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSC-----TTEEEEECCTTTCC
T ss_pred HHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcC-----CCeEEEECccccCC
Confidence 34556666677888999999999999999999985 579999999999999999887543 48999999999988
Q ss_pred CCCCcccEEEecccccCc--ccHHHHHHHHHhcccCCCEEEEEeecCCCc-hhHHHHHHHHHhhhhhhhhccCCchhhhh
Q 025144 137 FSDCFFDAITMGYGLRNV--VDKRKALEESFRVLKPGSRISVLDFNKSTQ-PFTTAIQEWMIDNVVVPVASGYGLAEEYQ 213 (257)
Q Consensus 137 ~~~~~~D~v~~~~~l~~~--~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (257)
+++++||+|++..+++|+ +++..++++++++|||||.+++.++..+.. .....+.....
T Consensus 116 ~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~------------------ 177 (266)
T 3ujc_A 116 FPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVK------------------ 177 (266)
T ss_dssp CCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHH------------------
T ss_pred CCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHh------------------
Confidence 888999999999999999 889999999999999999999998766552 22222211111
Q ss_pred hhHHHHhccCCHHHHHHHHHHcCceeeEEeeec
Q 025144 214 YLKSSIREFLTGKDLEKLALEIGFSRAKHYELS 246 (257)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 246 (257)
.....+++.+++.++++++||++++.....
T Consensus 178 ---~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 207 (266)
T 3ujc_A 178 ---QRKYTLITVEEYADILTACNFKNVVSKDLS 207 (266)
T ss_dssp ---HHTCCCCCHHHHHHHHHHTTCEEEEEEECH
T ss_pred ---cCCCCCCCHHHHHHHHHHcCCeEEEEEeCC
Confidence 111246799999999999999999877654
No 16
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.90 E-value=2.7e-23 Score=167.02 Aligned_cols=203 Identities=18% Similarity=0.156 Sum_probs=132.3
Q ss_pred hhHHHHhhhhhhhhhhhhhhhhh--hhHHHHHHH---HHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCC
Q 025144 29 SERQELFSRIAPVYDNLNDLLSF--GQHRIWKRM---AVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFS 103 (257)
Q Consensus 29 ~~~~~~y~~~a~~y~~~~~~~~~--~~~~~~~~~---~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s 103 (257)
....+.|+..+..|+........ .......+. ++..+.. ++.+|||||||+|..+..+++. +.+++++|+|
T Consensus 24 ~~~~~~fd~~a~~y~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s 99 (285)
T 4htf_A 24 AMQDRNFDDIAEKFSRNIYGTTKGQLRQAILWQDLDRVLAEMGP-QKLRVLDAGGGEGQTAIKMAER---GHQVILCDLS 99 (285)
T ss_dssp --------CHHHHHHSCTTSCHHHHHHHHHHHHHHHHHHHHTCS-SCCEEEEETCTTCHHHHHHHHT---TCEEEEEESC
T ss_pred cccccchhhHHHHHHHHhccCCcchHHHHHHHHHHHHHHHhcCC-CCCEEEEeCCcchHHHHHHHHC---CCEEEEEECC
Confidence 34556888888888765321111 111111111 2222332 3579999999999999999876 5799999999
Q ss_pred hhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-CCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeecCC
Q 025144 104 KNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKS 182 (257)
Q Consensus 104 ~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~ 182 (257)
+.+++.+++++...+.. .++.++++|+.+++ +++++||+|++..++++++++..+++++.++|||||.+++.+++..
T Consensus 100 ~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 177 (285)
T 4htf_A 100 AQMIDRAKQAAEAKGVS--DNMQFIHCAAQDVASHLETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAH 177 (285)
T ss_dssp HHHHHHHHHHHHC-CCG--GGEEEEESCGGGTGGGCSSCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEBHH
T ss_pred HHHHHHHHHHHHhcCCC--cceEEEEcCHHHhhhhcCCCceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEeCCc
Confidence 99999999988654432 57999999999876 6678999999999999999999999999999999999999876643
Q ss_pred CchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHHHHhccCCHHHHHHHHHHcCceeeEEeee
Q 025144 183 TQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYEL 245 (257)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 245 (257)
...........+. .......... ........+++.+++.++|+++||++++....
T Consensus 178 ~~~~~~~~~~~~~-----~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~aGf~v~~~~~~ 232 (285)
T 4htf_A 178 GLLMHNMVAGNFD-----YVQAGMPKKK---KRTLSPDYPRDPTQVYLWLEEAGWQIMGKTGV 232 (285)
T ss_dssp HHHHHHHHTTCHH-----HHHTTCCCC-------CCCSCCBCHHHHHHHHHHTTCEEEEEEEE
T ss_pred hHHHHHHHhcCHH-----HHhhhccccc---cccCCCCCCCCHHHHHHHHHHCCCceeeeeeE
Confidence 2211111100000 0000000000 00001124679999999999999999987765
No 17
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.90 E-value=5.5e-22 Score=160.66 Aligned_cols=196 Identities=13% Similarity=0.151 Sum_probs=143.3
Q ss_pred CchhHHHHhhhhhhhhhhhhhhh--------h------hhhHHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhC
Q 025144 27 CSSERQELFSRIAPVYDNLNDLL--------S------FGQHRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVG 92 (257)
Q Consensus 27 ~~~~~~~~y~~~a~~y~~~~~~~--------~------~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~ 92 (257)
..+.+...||...+.|+...... . ...+......+...+...++.+|||||||+|..+..+++.+
T Consensus 16 ~~~~i~~~Yd~~~~~y~~~l~~~~~y~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~- 94 (302)
T 3hem_A 16 PVEAVRSHYDKSNEFFKLWLDPSMTYSCAYFERPDMTLEEAQYAKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEY- 94 (302)
T ss_dssp CHHHHHHHHTSCHHHHHHHSCTTCCCSCCCCSSTTCCHHHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH-
T ss_pred hHHHHHHhcCCCHHHHHHhcCCCCceeeEEecCCCCCHHHHHHHHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhC-
Confidence 35777888887777776553310 0 00122223445555677888999999999999999999986
Q ss_pred CCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEecccccCcccH---------HHHHHH
Q 025144 93 SQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGYGLRNVVDK---------RKALEE 163 (257)
Q Consensus 93 ~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~---------~~~l~~ 163 (257)
+.+|+++|+|+.+++.++++....+.. .++.+..+|+.++ +++||+|++..+++|++++ ..++++
T Consensus 95 -~~~v~gvD~s~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~---~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~ 168 (302)
T 3hem_A 95 -DVNVIGLTLSENQYAHDKAMFDEVDSP--RRKEVRIQGWEEF---DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKK 168 (302)
T ss_dssp -CCEEEEEECCHHHHHHHHHHHHHSCCS--SCEEEEECCGGGC---CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHH
T ss_pred -CCEEEEEECCHHHHHHHHHHHHhcCCC--CceEEEECCHHHc---CCCccEEEEcchHHhcCccccccchhHHHHHHHH
Confidence 379999999999999999998664432 4799999999876 6889999999999999665 799999
Q ss_pred HHhcccCCCEEEEEeecCCCchhHHHH-----------HHHHHhhhhhhhhccCCchhhhhhhHHHHhccCCHHHHHHHH
Q 025144 164 SFRVLKPGSRISVLDFNKSTQPFTTAI-----------QEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLA 232 (257)
Q Consensus 164 ~~~~Lk~gG~l~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 232 (257)
+.++|||||.+++.++..+........ ..+.... ..+ ...+.+.+++.+++
T Consensus 169 ~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p-----------------~~~~~s~~~~~~~l 230 (302)
T 3hem_A 169 FYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTE-IFP-----------------GGRLPRISQVDYYS 230 (302)
T ss_dssp HHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHH-TCT-----------------TCCCCCHHHHHHHH
T ss_pred HHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHh-cCC-----------------CCCCCCHHHHHHHH
Confidence 999999999999988876554321110 0111100 000 01356889999999
Q ss_pred HHcCceeeEEeeecC
Q 025144 233 LEIGFSRAKHYELSG 247 (257)
Q Consensus 233 ~~~Gf~~~~~~~~~~ 247 (257)
+++||++++...+..
T Consensus 231 ~~aGf~~~~~~~~~~ 245 (302)
T 3hem_A 231 SNAGWKVERYHRIGA 245 (302)
T ss_dssp HHHTCEEEEEEECGG
T ss_pred HhCCcEEEEEEeCch
Confidence 999999998876643
No 18
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.90 E-value=1.2e-22 Score=160.63 Aligned_cols=164 Identities=19% Similarity=0.106 Sum_probs=128.8
Q ss_pred HHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC
Q 025144 56 IWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL 135 (257)
Q Consensus 56 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 135 (257)
.....+...+...++.+|||+|||+|..+..+++.+ +.+++++|+|+.+++.++++.+..+.. .++.++++|+.++
T Consensus 23 ~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~--~~v~~~~~d~~~~ 98 (256)
T 1nkv_A 23 EKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEELGVS--ERVHFIHNDAAGY 98 (256)
T ss_dssp HHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHHTTCT--TTEEEEESCCTTC
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCC--cceEEEECChHhC
Confidence 344556666778889999999999999999999885 568999999999999999988654432 4799999999998
Q ss_pred CCCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhh
Q 025144 136 PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYL 215 (257)
Q Consensus 136 ~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (257)
++ +++||+|++..++++++++..++++++++|||||.+++.+...............+. .
T Consensus 99 ~~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~--------~----------- 158 (256)
T 1nkv_A 99 VA-NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACG--------V----------- 158 (256)
T ss_dssp CC-SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTT--------C-----------
T ss_pred Cc-CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHh--------c-----------
Confidence 76 789999999999999999999999999999999999998765433222111111000 0
Q ss_pred HHHHhccCCHHHHHHHHHHcCceeeEEee
Q 025144 216 KSSIREFLTGKDLEKLALEIGFSRAKHYE 244 (257)
Q Consensus 216 ~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 244 (257)
.....+++..++.++|+++||++++...
T Consensus 159 -~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 186 (256)
T 1nkv_A 159 -SSTSDFLTLPGLVGAFDDLGYDVVEMVL 186 (256)
T ss_dssp -SCGGGSCCHHHHHHHHHTTTBCCCEEEE
T ss_pred -ccccccCCHHHHHHHHHHCCCeeEEEEe
Confidence 0012467899999999999999887654
No 19
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.90 E-value=3.7e-23 Score=164.29 Aligned_cols=212 Identities=18% Similarity=0.178 Sum_probs=134.6
Q ss_pred HHHHhh-hhhhhhhhhhhhhhh---hhHHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhH
Q 025144 31 RQELFS-RIAPVYDNLNDLLSF---GQHRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQ 106 (257)
Q Consensus 31 ~~~~y~-~~a~~y~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~ 106 (257)
..++|+ ..+..|+........ .....+.+.+... .+++.+|||+|||+|.++..+++. +.+++++|+|+.+
T Consensus 10 ~~~~y~~~~a~~yd~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~ 84 (263)
T 3pfg_A 10 PQADYSGEIAELYDLVHQGKGKDYHREAADLAALVRRH--SPKAASLLDVACGTGMHLRHLADS---FGTVEGLELSADM 84 (263)
T ss_dssp CBCSCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH--CTTCCEEEEETCTTSHHHHHHTTT---SSEEEEEESCHHH
T ss_pred cccccchhHHHHHHHHhhcCCCCHHHHHHHHHHHHHhh--CCCCCcEEEeCCcCCHHHHHHHHc---CCeEEEEECCHHH
Confidence 344666 677777766532111 1112222222222 345679999999999999999876 4689999999999
Q ss_pred HHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEecc-cccCcc---cHHHHHHHHHhcccCCCEEEEEeecCC
Q 025144 107 LSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGY-GLRNVV---DKRKALEESFRVLKPGSRISVLDFNKS 182 (257)
Q Consensus 107 ~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~-~l~~~~---~~~~~l~~~~~~Lk~gG~l~~~~~~~~ 182 (257)
++.++++. .++.++++|+.++++ +++||+|++.. ++++++ +...++++++++|||||.+++.++..+
T Consensus 85 ~~~a~~~~--------~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 155 (263)
T 3pfg_A 85 LAIARRRN--------PDAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPWWFP 155 (263)
T ss_dssp HHHHHHHC--------TTSEEEECCTTTCCC-SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCCCCT
T ss_pred HHHHHhhC--------CCCEEEECChHHCCc-cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEeccCh
Confidence 99999886 589999999999876 68899999998 999995 567889999999999999988654433
Q ss_pred CchhHHHHHHH-----------HH----hhhhhhhhccCC---chhhhh-hhHHHHhccCCHHHHHHHHHHcCceeeEEe
Q 025144 183 TQPFTTAIQEW-----------MI----DNVVVPVASGYG---LAEEYQ-YLKSSIREFLTGKDLEKLALEIGFSRAKHY 243 (257)
Q Consensus 183 ~~~~~~~~~~~-----------~~----~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 243 (257)
........... .. ..........+. ....+. .......++++.+++.++|+++||+++++.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~ 235 (263)
T 3pfg_A 156 ENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLVAGPDRGITHHEESHRITLFTREQYERAFTAAGLSVEFMP 235 (263)
T ss_dssp TTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEES
T ss_pred hhccccccccceeccCCceeEEEEEEEecCcEEEEEEEEEEecCCCcEEEEEEEEEEEeecHHHHHHHHHHCCCEEEEee
Confidence 31100000000 00 000000000000 000000 000011346799999999999999999886
Q ss_pred eecCceeEEEeeeC
Q 025144 244 ELSGGLMGNLVATR 257 (257)
Q Consensus 244 ~~~~g~~~~~~~~k 257 (257)
.... ...+++++|
T Consensus 236 ~~~~-~~~~~va~K 248 (263)
T 3pfg_A 236 GGPS-GRGLFTGLP 248 (263)
T ss_dssp STTT-SSCEEEEEE
T ss_pred CCCC-CceeEEEec
Confidence 6543 445566654
No 20
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.90 E-value=9.8e-23 Score=170.14 Aligned_cols=200 Identities=22% Similarity=0.305 Sum_probs=126.2
Q ss_pred CCchhHHHHhhhhhhhhhhhhh-------hhhhhhHHHHHH---HHHhhhC----------CCCCCeEEEecCCCChhHH
Q 025144 26 RCSSERQELFSRIAPVYDNLND-------LLSFGQHRIWKR---MAVSWSG----------AKTGDNVLDVCCGSGDLSF 85 (257)
Q Consensus 26 ~~~~~~~~~y~~~a~~y~~~~~-------~~~~~~~~~~~~---~~~~~~~----------~~~~~~vLdiG~G~G~~~~ 85 (257)
+..+.++++|+..+..|+.... .......+.+.. .+...+. ..++.+|||+|||+|..+.
T Consensus 20 ~~~~~v~~~Y~~~~~~~~~~~~~~~~~~~~~p~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~VLDlGcG~G~~~~ 99 (383)
T 4fsd_A 20 SIRDHVADYYGKTLQSSADLKTSACKLAAAVPESHRKILADIADEVLEKFYGCGSTLPADGSLEGATVLDLGCGTGRDVY 99 (383)
T ss_dssp ------------------------------CCHHHHHHHHTSCHHHHHHCCSCCCCCSCGGGGTTCEEEEESCTTSHHHH
T ss_pred HHHHHHHHHHHHHhcchhhcccccccCCCCCCHHHHHHHHHhhHHHHHHhcCCCCccccccCCCCCEEEEecCccCHHHH
Confidence 4467788999888877755411 000111222211 1222111 4567899999999999999
Q ss_pred HHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhh-----ccCCCeeEEEccCCCC------CCCCCcccEEEecccccCc
Q 025144 86 LLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSK-----ACYKNIEWVEGDALDL------PFSDCFFDAITMGYGLRNV 154 (257)
Q Consensus 86 ~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~-----~~~~~~~~~~~d~~~~------~~~~~~~D~v~~~~~l~~~ 154 (257)
.+++.++++.+|+++|+|+.+++.++++++.... ...+++.++++|+.++ ++++++||+|+++.+++++
T Consensus 100 ~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~~~~~fD~V~~~~~l~~~ 179 (383)
T 4fsd_A 100 LASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGVPDSSVDIVISNCVCNLS 179 (383)
T ss_dssp HHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCCCTTCEEEEEEESCGGGC
T ss_pred HHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCCCCCCEEEEEEccchhcC
Confidence 9999876778999999999999999998754311 1115899999999987 7788899999999999999
Q ss_pred ccHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHHHHhccCCHHHHHHHHHH
Q 025144 155 VDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALE 234 (257)
Q Consensus 155 ~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 234 (257)
+++..++++++++|||||.+++.++................ ........++.+++.++|++
T Consensus 180 ~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~ll~~ 240 (383)
T 4fsd_A 180 TNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPIL-------------------YGECLGGALYLEDFRRLVAE 240 (383)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHH-------------------HHTTCTTCCBHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHH-------------------hhcccccCCCHHHHHHHHHH
Confidence 99999999999999999999998766543221111100000 00011235678999999999
Q ss_pred cCceeeEEee
Q 025144 235 IGFSRAKHYE 244 (257)
Q Consensus 235 ~Gf~~~~~~~ 244 (257)
+||++++...
T Consensus 241 aGF~~v~~~~ 250 (383)
T 4fsd_A 241 AGFRDVRLVS 250 (383)
T ss_dssp TTCCCEEEEE
T ss_pred CCCceEEEEe
Confidence 9998776544
No 21
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.90 E-value=7.6e-23 Score=160.95 Aligned_cols=190 Identities=17% Similarity=0.137 Sum_probs=122.0
Q ss_pred HHHHhhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHH
Q 025144 31 RQELFSRIAPVYDNLNDLLSFGQHRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMA 110 (257)
Q Consensus 31 ~~~~y~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a 110 (257)
..++|+..+..|+...... ...+.+.+. +.+..++.+|||||||+|.++..+++. +.+++++|+|+.+++.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---l~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a 80 (250)
T 2p7i_A 9 DQEIKDTAGHKYAYNFDFD--VMHPFMVRA---FTPFFRPGNLLELGSFKGDFTSRLQEH---FNDITCVEASEEAISHA 80 (250)
T ss_dssp --------------CHHHH--THHHHHHHH---HGGGCCSSCEEEESCTTSHHHHHHTTT---CSCEEEEESCHHHHHHH
T ss_pred CHHHHhhHHHHhcCccchh--hHHHHHHHH---HHhhcCCCcEEEECCCCCHHHHHHHHh---CCcEEEEeCCHHHHHHH
Confidence 3578888777775532211 111222222 223346779999999999999999876 34899999999999999
Q ss_pred HhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEecccccCcccHHHHHHHHH-hcccCCCEEEEEeecCCCchhHHH
Q 025144 111 SSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGYGLRNVVDKRKALEESF-RVLKPGSRISVLDFNKSTQPFTTA 189 (257)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~-~~Lk~gG~l~~~~~~~~~~~~~~~ 189 (257)
+++.. .++.++++|+.++ .++++||+|++.++++|++++..++++++ ++|||||.+++.+++........
T Consensus 81 ~~~~~-------~~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~- 151 (250)
T 2p7i_A 81 QGRLK-------DGITYIHSRFEDA-QLPRRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLVCPNANAVSRQI- 151 (250)
T ss_dssp HHHSC-------SCEEEEESCGGGC-CCSSCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHH-
T ss_pred HHhhh-------CCeEEEEccHHHc-CcCCcccEEEEhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHH-
Confidence 98863 2789999999887 46789999999999999999999999999 99999999999887654422111
Q ss_pred HHHHHHhhhhhhhhccCCchhhhhhhHHHHhccCCHHHHHHHHHHcCceeeEEeee
Q 025144 190 IQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYEL 245 (257)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 245 (257)
... ...... ...... . .......+.++.+++.++|+++||++++....
T Consensus 152 --~~~-~~~~~~---~~~~~~-~-~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 199 (250)
T 2p7i_A 152 --AVK-MGIISH---NSAVTE-A-EFAHGHRCTYALDTLERDASRAGLQVTYRSGI 199 (250)
T ss_dssp --HHH-TTSSSS---TTCCCH-H-HHHTTCCCCCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred --HHH-cCcccc---chhccc-c-cccccccccCCHHHHHHHHHHCCCeEEEEeee
Confidence 000 000000 000000 0 00111234679999999999999999987654
No 22
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.90 E-value=1e-22 Score=159.94 Aligned_cols=137 Identities=21% Similarity=0.233 Sum_probs=109.5
Q ss_pred HhhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhCC--CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHH
Q 025144 34 LFSRIAPVYDNLNDLLSFGQHRIWKRMAVSWSGA--KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMAS 111 (257)
Q Consensus 34 ~y~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~ 111 (257)
.|+.++..|+..... ......+.+.+...+.. .++.+|||+|||+|..+..+++. +.+++++|+|+.+++.++
T Consensus 2 ~y~~~a~~yd~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~s~~~~~~a~ 76 (246)
T 1y8c_A 2 CYNKFAHIYDKLIRA--DVDYKKWSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPK---FKNTWAVDLSQEMLSEAE 76 (246)
T ss_dssp CHHHHHHHHHHHTTC--SCCHHHHHHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGG---SSEEEEECSCHHHHHHHH
T ss_pred hHHHHHHHHHHHccc--cccHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHC---CCcEEEEECCHHHHHHHH
Confidence 588888888876541 11234445555555433 36789999999999999999876 468999999999999999
Q ss_pred hhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEecc-cccCc---ccHHHHHHHHHhcccCCCEEEEEeec
Q 025144 112 SRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGY-GLRNV---VDKRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~-~l~~~---~~~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
++....+ .++.++++|+.+++++ ++||+|++.. +++|+ +++..++++++++|||||.+++...+
T Consensus 77 ~~~~~~~----~~~~~~~~d~~~~~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 77 NKFRSQG----LKPRLACQDISNLNIN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINS 144 (246)
T ss_dssp HHHHHTT----CCCEEECCCGGGCCCS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred HHHhhcC----CCeEEEecccccCCcc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 9875432 3789999999988766 8899999998 99999 67889999999999999999875543
No 23
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.90 E-value=4.6e-22 Score=161.82 Aligned_cols=163 Identities=16% Similarity=0.169 Sum_probs=128.5
Q ss_pred HHHHhhhC-CCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCC
Q 025144 59 RMAVSWSG-AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF 137 (257)
Q Consensus 59 ~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~ 137 (257)
+.+...+. ..++.+|||+|||+|.++..+++.+ +.+|+++|+|+.+++.++++....+.. .++.++.+|+.++++
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~ 181 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRID--DHVRSRVCNMLDTPF 181 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCT--TTEEEEECCTTSCCC
T ss_pred HHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCC--CceEEEECChhcCCC
Confidence 33455555 7788899999999999999999885 579999999999999999988765432 479999999999888
Q ss_pred CCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeecCCCch-hHHHHHHHHHhhhhhhhhccCCchhhhhhhH
Q 025144 138 SDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQP-FTTAIQEWMIDNVVVPVASGYGLAEEYQYLK 216 (257)
Q Consensus 138 ~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (257)
++++||+|++..+++++ ++..+++++.++|||||.+++.++...... ............
T Consensus 182 ~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~------------------- 241 (312)
T 3vc1_A 182 DKGAVTASWNNESTMYV-DLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAH------------------- 241 (312)
T ss_dssp CTTCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHH-------------------
T ss_pred CCCCEeEEEECCchhhC-CHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhh-------------------
Confidence 88999999999999999 599999999999999999999886654422 111111111100
Q ss_pred HHHhccCCHHHHHHHHHHcCceeeEEeeec
Q 025144 217 SSIREFLTGKDLEKLALEIGFSRAKHYELS 246 (257)
Q Consensus 217 ~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 246 (257)
....+++.+++.++++++||++++...+.
T Consensus 242 -~~~~~~s~~~~~~~l~~aGf~~~~~~~~~ 270 (312)
T 3vc1_A 242 -FECNIHSRREYLRAMADNRLVPHTIVDLT 270 (312)
T ss_dssp -HTCCCCBHHHHHHHHHTTTEEEEEEEECH
T ss_pred -hcCCCCCHHHHHHHHHHCCCEEEEEEeCC
Confidence 01135689999999999999999887753
No 24
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.90 E-value=5.3e-23 Score=166.84 Aligned_cols=178 Identities=17% Similarity=0.176 Sum_probs=131.7
Q ss_pred CCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEE
Q 025144 66 GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAI 145 (257)
Q Consensus 66 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v 145 (257)
...++.+|||||||+|..+..++....++.+|+++|+|+.+++.++++....+.. .++.++++|+.+++++ ++||+|
T Consensus 115 ~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~-~~fD~v 191 (305)
T 3ocj_A 115 HLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALA--GQITLHRQDAWKLDTR-EGYDLL 191 (305)
T ss_dssp HCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTG--GGEEEEECCGGGCCCC-SCEEEE
T ss_pred hCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCC--CceEEEECchhcCCcc-CCeEEE
Confidence 3567889999999999999998522246789999999999999999998655432 4699999999998876 899999
Q ss_pred EecccccCcccHHH---HHHHHHhcccCCCEEEEEeecCCCchhHHH------H--HHHHHhhhhhhhhccCCchhhhhh
Q 025144 146 TMGYGLRNVVDKRK---ALEESFRVLKPGSRISVLDFNKSTQPFTTA------I--QEWMIDNVVVPVASGYGLAEEYQY 214 (257)
Q Consensus 146 ~~~~~l~~~~~~~~---~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~------~--~~~~~~~~~~~~~~~~~~~~~~~~ 214 (257)
++..++++++++.. ++++++++|||||.+++.++..+....... . ..........+ ..
T Consensus 192 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~-----------~~ 260 (305)
T 3ocj_A 192 TSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFT-----------RL 260 (305)
T ss_dssp ECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHH-----------HT
T ss_pred EECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHH-----------HH
Confidence 99999999987665 799999999999999998866533211000 0 00000000000 00
Q ss_pred hHHHHhccCCHHHHHHHHHHcCceeeEEeeecCceeEEEeeeC
Q 025144 215 LKSSIREFLTGKDLEKLALEIGFSRAKHYELSGGLMGNLVATR 257 (257)
Q Consensus 215 ~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~g~~~~~~~~k 257 (257)
.......+++.+++.++|+++||++++......+.+..++++|
T Consensus 261 ~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~~~~~~~v~a~K 303 (305)
T 3ocj_A 261 IQPRWNALRTHAQTRAQLEEAGFTDLRFEDDRARLFPTVIARK 303 (305)
T ss_dssp TCCSCCCCCCHHHHHHHHHHTTCEEEEEECCTTSSSCEEEEEC
T ss_pred HhhhhhccCCHHHHHHHHHHCCCEEEEEEcccCceeeEEEEec
Confidence 0001124579999999999999999999987777788888876
No 25
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.89 E-value=4.3e-22 Score=157.68 Aligned_cols=162 Identities=15% Similarity=0.111 Sum_probs=122.9
Q ss_pred HHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCC
Q 025144 60 MAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSD 139 (257)
Q Consensus 60 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 139 (257)
.+...+...++.+|||+|||+|..+..+++.+ ++.+++++|+|+.+++.++++. +++.++.+|+.+++ ++
T Consensus 24 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~~--------~~~~~~~~d~~~~~-~~ 93 (259)
T 2p35_A 24 DLLAQVPLERVLNGYDLGCGPGNSTELLTDRY-GVNVITGIDSDDDMLEKAADRL--------PNTNFGKADLATWK-PA 93 (259)
T ss_dssp HHHTTCCCSCCSSEEEETCTTTHHHHHHHHHH-CTTSEEEEESCHHHHHHHHHHS--------TTSEEEECCTTTCC-CS
T ss_pred HHHHhcCCCCCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhC--------CCcEEEECChhhcC-cc
Confidence 45555666778899999999999999999986 6789999999999999998873 68999999999887 67
Q ss_pred CcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHHHH
Q 025144 140 CFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSI 219 (257)
Q Consensus 140 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (257)
++||+|++..++++++++..++++++++|||||.+++.++..........+........ +. ..........
T Consensus 94 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~---~~------~~~~~~~~~~ 164 (259)
T 2p35_A 94 QKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPDNLQEPTHIAMHETADGGP---WK------DAFSGGGLRR 164 (259)
T ss_dssp SCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEECCTTSHHHHHHHHHHHHST---TG------GGC-------
T ss_pred CCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCCCCCcHHHHHHHHHhcCcc---hH------HHhccccccc
Confidence 89999999999999999999999999999999999998866544332222222221100 00 0000000123
Q ss_pred hccCCHHHHHHHHHHcCceee
Q 025144 220 REFLTGKDLEKLALEIGFSRA 240 (257)
Q Consensus 220 ~~~~~~~~~~~~l~~~Gf~~~ 240 (257)
..+++.+++.++|+++||++.
T Consensus 165 ~~~~~~~~~~~~l~~aGf~v~ 185 (259)
T 2p35_A 165 KPLPPPSDYFNALSPKSSRVD 185 (259)
T ss_dssp CCCCCHHHHHHHHGGGEEEEE
T ss_pred cCCCCHHHHHHHHHhcCCceE
Confidence 457799999999999999754
No 26
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.89 E-value=2.4e-22 Score=158.66 Aligned_cols=114 Identities=17% Similarity=0.214 Sum_probs=99.8
Q ss_pred HHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCC
Q 025144 59 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFS 138 (257)
Q Consensus 59 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 138 (257)
..+...+...++.+|||+|||+|..+..+++. ++ .+++++|+|+.+++.++++... .++.++++|+.+++++
T Consensus 34 ~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~-~~-~~v~~vD~s~~~~~~a~~~~~~------~~~~~~~~d~~~~~~~ 105 (253)
T 3g5l_A 34 HELKKMLPDFNQKTVLDLGCGFGWHCIYAAEH-GA-KKVLGIDLSERMLTEAKRKTTS------PVVCYEQKAIEDIAIE 105 (253)
T ss_dssp HHHHTTCCCCTTCEEEEETCTTCHHHHHHHHT-TC-SEEEEEESCHHHHHHHHHHCCC------TTEEEEECCGGGCCCC
T ss_pred HHHHHhhhccCCCEEEEECCCCCHHHHHHHHc-CC-CEEEEEECCHHHHHHHHHhhcc------CCeEEEEcchhhCCCC
Confidence 34555666667889999999999999999887 22 3999999999999999988751 6899999999998888
Q ss_pred CCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeec
Q 025144 139 DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 139 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
+++||+|++..++++++++..++++++++|||||.+++...+
T Consensus 106 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 147 (253)
T 3g5l_A 106 PDAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFSVEH 147 (253)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCeEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 899999999999999999999999999999999999887543
No 27
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.89 E-value=1.3e-21 Score=157.22 Aligned_cols=194 Identities=14% Similarity=0.109 Sum_probs=139.5
Q ss_pred CchhHHHHhhhhhhhhhhhhhhh-----------hh---hhHHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhC
Q 025144 27 CSSERQELFSRIAPVYDNLNDLL-----------SF---GQHRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVG 92 (257)
Q Consensus 27 ~~~~~~~~y~~~a~~y~~~~~~~-----------~~---~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~ 92 (257)
..+.++..||...+.|+.+.+.. .. ..+....+.+...+...++.+|||||||+|..+..+++..
T Consensus 8 ~~~~i~~~Yd~~~~~~~~~~~~~~~y~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~- 86 (287)
T 1kpg_A 8 HFANVQAHYDLSDDFFRLFLDPTQTYSCAYFERDDMTLQEAQIAKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKY- 86 (287)
T ss_dssp CHHHHHHHHTSCHHHHTTTSCTTCCCSCCCCSSTTCCHHHHHHHHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHH-
T ss_pred cHHHHHHhcCCCHHHHHHhcCCCCCcceEEecCCCCCHHHHHHHHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHc-
Confidence 35677888886665555432110 00 1122233445555667788899999999999999999775
Q ss_pred CCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEecccccCc--ccHHHHHHHHHhcccC
Q 025144 93 SQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGYGLRNV--VDKRKALEESFRVLKP 170 (257)
Q Consensus 93 ~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~--~~~~~~l~~~~~~Lk~ 170 (257)
+.+|+++|+|+.+++.++++....+.. .++.+..+|+.+++ ++||+|++..+++|+ +++..++++++++|||
T Consensus 87 -~~~v~gvd~s~~~~~~a~~~~~~~~~~--~~~~~~~~d~~~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkp 160 (287)
T 1kpg_A 87 -DVNVVGLTLSKNQANHVQQLVANSENL--RSKRVLLAGWEQFD---EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPA 160 (287)
T ss_dssp -CCEEEEEESCHHHHHHHHHHHHTCCCC--SCEEEEESCGGGCC---CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCT
T ss_pred -CCEEEEEECCHHHHHHHHHHHHhcCCC--CCeEEEECChhhCC---CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCC
Confidence 459999999999999999987654332 58999999998764 789999999999999 6789999999999999
Q ss_pred CCEEEEEeecCCCchhH-----------HHHHHHHHhhhhhhhhccCCchhhhhhhHHHHhccCCHHHHHHHHHHcCcee
Q 025144 171 GSRISVLDFNKSTQPFT-----------TAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSR 239 (257)
Q Consensus 171 gG~l~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 239 (257)
||.+++.++........ .....+.... .. ....+.+.+++.++++++||++
T Consensus 161 gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----------------~~~~~~s~~~~~~~l~~aGf~~ 222 (287)
T 1kpg_A 161 DGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTE-IF-----------------PGGRLPSIPMVQECASANGFTV 222 (287)
T ss_dssp TCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHH-TS-----------------TTCCCCCHHHHHHHHHTTTCEE
T ss_pred CCEEEEEEecCCCccccccccccccccccchhhhHHhe-eC-----------------CCCCCCCHHHHHHHHHhCCcEE
Confidence 99999988776543210 0111111100 00 0013558999999999999999
Q ss_pred eEEeee
Q 025144 240 AKHYEL 245 (257)
Q Consensus 240 ~~~~~~ 245 (257)
++....
T Consensus 223 ~~~~~~ 228 (287)
T 1kpg_A 223 TRVQSL 228 (287)
T ss_dssp EEEEEC
T ss_pred EEEEeC
Confidence 988765
No 28
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.89 E-value=1.1e-22 Score=161.49 Aligned_cols=172 Identities=16% Similarity=0.223 Sum_probs=127.1
Q ss_pred HhhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhh
Q 025144 34 LFSRIAPVYDNLNDLLSFGQHRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSR 113 (257)
Q Consensus 34 ~y~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~ 113 (257)
+|+..+..|+..... ...+.+.+...+...++.+|||+|||+|.++..+++ ++.+|+++|+|+.+++.++++
T Consensus 4 ~y~~~a~~y~~~~~~-----~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~ 75 (261)
T 3ege_A 4 IYNSIGKQYSQTRVP-----DIRIVNAIINLLNLPKGSVIADIGAGTGGYSVALAN---QGLFVYAVEPSIVMRQQAVVH 75 (261)
T ss_dssp ---------CCSBCC-----CHHHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHT---TTCEEEEECSCHHHHHSSCCC
T ss_pred HHHHHHHHHhhcccc-----cHHHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHh---CCCEEEEEeCCHHHHHHHHhc
Confidence 688888888876532 234566677777778889999999999999999986 468999999999999887765
Q ss_pred hhhhhhccCCCeeEEEccCCCCCCCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeecCCCch--hH-HHH
Q 025144 114 QDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQP--FT-TAI 190 (257)
Q Consensus 114 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~--~~-~~~ 190 (257)
.++.++++|+.++++++++||+|++.++++|++++..++++++++|| ||.+++.++...... .. ..+
T Consensus 76 ---------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~ 145 (261)
T 3ege_A 76 ---------PQVEWFTGYAENLALPDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYF 145 (261)
T ss_dssp ---------TTEEEECCCTTSCCSCTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTC
T ss_pred ---------cCCEEEECchhhCCCCCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHH
Confidence 38999999999988888999999999999999999999999999999 999888887542211 00 000
Q ss_pred HHHHHhhhhhhhhccCCchhhhhhhHHHHhccCCHHHHHHHHHHcCceeeEEeee
Q 025144 191 QEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYEL 245 (257)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 245 (257)
. .........+.+.+++. +|+++||++++...+
T Consensus 146 ~---------------------~~~~~~~~~~~~~~~~~-~l~~aGF~~v~~~~~ 178 (261)
T 3ege_A 146 P---------------------FLWEDALRFLPLDEQIN-LLQENTKRRVEAIPF 178 (261)
T ss_dssp H---------------------HHHHHHHTSCCHHHHHH-HHHHHHCSEEEEEEC
T ss_pred H---------------------HHhhhhhhhCCCHHHHH-HHHHcCCCceeEEEe
Confidence 0 01112223466788899 999999998876654
No 29
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.89 E-value=2.4e-22 Score=160.75 Aligned_cols=172 Identities=22% Similarity=0.333 Sum_probs=129.3
Q ss_pred HHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC
Q 025144 56 IWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL 135 (257)
Q Consensus 56 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 135 (257)
.+.+.+.......++.+|||||||+|.++..+++. .|+.+++++|+|+.+++.++++....+. +++.++..|+.++
T Consensus 24 ~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~~~~~~~d~~~~ 99 (276)
T 3mgg_A 24 TLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKN-NPDAEITSIDISPESLEKARENTEKNGI---KNVKFLQANIFSL 99 (276)
T ss_dssp HHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHH-CTTSEEEEEESCHHHHHHHHHHHHHTTC---CSEEEEECCGGGC
T ss_pred HHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCC---CCcEEEEcccccC
Confidence 34455555556678899999999999999999998 4678999999999999999998765443 4799999999998
Q ss_pred CCCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeecCCCch---hHHHHHHHHHhhhhhhhhccCCchhhh
Q 025144 136 PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQP---FTTAIQEWMIDNVVVPVASGYGLAEEY 212 (257)
Q Consensus 136 ~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (257)
++++++||+|++..++++++++..++++++++|||||.+++.+....... .......++.. ..
T Consensus 100 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~------------- 165 (276)
T 3mgg_A 100 PFEDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNC-LI------------- 165 (276)
T ss_dssp CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHH-HH-------------
T ss_pred CCCCCCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHH-HH-------------
Confidence 88889999999999999999999999999999999999999875532211 01111111110 00
Q ss_pred hhhHHHHhccCCHHHHHHHHHHcCceeeEEeee
Q 025144 213 QYLKSSIREFLTGKDLEKLALEIGFSRAKHYEL 245 (257)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 245 (257)
..........++..++.++|+++||++++....
T Consensus 166 ~~~~~~~~~~~~~~~l~~~l~~aGf~~v~~~~~ 198 (276)
T 3mgg_A 166 RVQAYMKGNSLVGRQIYPLLQESGFEKIRVEPR 198 (276)
T ss_dssp HHHHHTTCCTTGGGGHHHHHHHTTCEEEEEEEE
T ss_pred HHHHhcCCCcchHHHHHHHHHHCCCCeEEEeeE
Confidence 000000112456789999999999999887754
No 30
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.89 E-value=5.7e-22 Score=157.31 Aligned_cols=188 Identities=19% Similarity=0.207 Sum_probs=133.0
Q ss_pred HHHhhhhhhhhhhhhhhhhhhhHHHHHHHHHh-hhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHH
Q 025144 32 QELFSRIAPVYDNLNDLLSFGQHRIWKRMAVS-WSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMA 110 (257)
Q Consensus 32 ~~~y~~~a~~y~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a 110 (257)
.+.|+..+..|+..... .......+...+.. .....++.+|||+|||+|..+..+++. +.+++++|+|+.+++.+
T Consensus 2 ~~~~~~~a~~y~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a 77 (263)
T 2yqz_A 2 SSALLRAAYAYDRLRAH-PPEVAGQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIAR---GYRYIALDADAAMLEVF 77 (263)
T ss_dssp CHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTT---TCEEEEEESCHHHHHHH
T ss_pred CCchHHHHHHHhhhccc-ChHHHHHHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHC---CCEEEEEECCHHHHHHH
Confidence 35688888888876532 22222333333322 225567889999999999999999876 57999999999999999
Q ss_pred HhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeecCCC-ch---h
Q 025144 111 SSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKST-QP---F 186 (257)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~-~~---~ 186 (257)
+++.... .+++.+..+|+.++++++++||+|++..++++++++..++++++++|||||.+++. +.... .. .
T Consensus 78 ~~~~~~~----~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~-~~~~~~~~~~~~ 152 (263)
T 2yqz_A 78 RQKIAGV----DRKVQVVQADARAIPLPDESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG-WDQAEASPEWTL 152 (263)
T ss_dssp HHHTTTS----CTTEEEEESCTTSCCSCTTCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE-EEEECCCHHHHH
T ss_pred HHHhhcc----CCceEEEEcccccCCCCCCCeeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEE-ecCCCccHHHHH
Confidence 9887221 16899999999998888889999999999999999999999999999999999887 33321 11 1
Q ss_pred HHHHHHHHHhhhhhhhhccCCchhhhhhhHHHHhccCCHHHHHHHHHHcCceeeEEe
Q 025144 187 TTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHY 243 (257)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 243 (257)
...+..... ....+ ... ....++.+++.++|+++||+++...
T Consensus 153 ~~~~~~~~~-~~~~~------~~~--------~~~~~~~~~~~~~l~~~Gf~~~~~~ 194 (263)
T 2yqz_A 153 QERWRAFAA-EEGFP------VER--------GLHAKRLKEVEEALRRLGLKPRTRE 194 (263)
T ss_dssp HHHHHHHHH-HHTCC------CCC--------CHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred HHHHHHHHH-HhCCC------ccc--------ccccCCHHHHHHHHHHcCCCcceEE
Confidence 111111111 00000 000 0124467899999999999977654
No 31
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.89 E-value=5.4e-22 Score=155.60 Aligned_cols=203 Identities=18% Similarity=0.202 Sum_probs=124.4
Q ss_pred HHhhh--hhhhhhhhhhhhhhhhHHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHH
Q 025144 33 ELFSR--IAPVYDNLNDLLSFGQHRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMA 110 (257)
Q Consensus 33 ~~y~~--~a~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a 110 (257)
+.|+. .+..|+.................+...+...++.+|||+|||+|..+..+++. + ..+++++|+|+.+++.+
T Consensus 5 ~~y~~~~~~~~y~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a 82 (243)
T 3bkw_A 5 NIYDQPDFFAGYSQLGRSIEGLDGAAEWPALRAMLPEVGGLRIVDLGCGFGWFCRWAHEH-G-ASYVLGLDLSEKMLARA 82 (243)
T ss_dssp --------------------CGGGCTTHHHHHHHSCCCTTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHH
T ss_pred hhhcCHHHHHHHHHhccCCccHHHHHhHHHHHHhccccCCCEEEEEcCcCCHHHHHHHHC-C-CCeEEEEcCCHHHHHHH
Confidence 44555 56666665432221111112234556666678889999999999999999876 2 23999999999999999
Q ss_pred HhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHH
Q 025144 111 SSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAI 190 (257)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~ 190 (257)
+++... .++.+.++|+.++++++++||+|++..++++++++..++++++++|+|||.+++.+.+........
T Consensus 83 ~~~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~-- 154 (243)
T 3bkw_A 83 RAAGPD------TGITYERADLDKLHLPQDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTEHPIYMAPAR-- 154 (243)
T ss_dssp HHTSCS------SSEEEEECCGGGCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHCCSS--
T ss_pred HHhccc------CCceEEEcChhhccCCCCCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEeCCcccccCcC--
Confidence 988643 378999999998877788999999999999999999999999999999999988765421000000
Q ss_pred HHHHHhhh---hhhhhccCCc-hhhhhhhHHHH-hccCCHHHHHHHHHHcCceeeEEeee
Q 025144 191 QEWMIDNV---VVPVASGYGL-AEEYQYLKSSI-REFLTGKDLEKLALEIGFSRAKHYEL 245 (257)
Q Consensus 191 ~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~l~~~Gf~~~~~~~~ 245 (257)
..|..... ..+....... .....+..... ...++.+++.++|+++||++++..+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~l~~aGF~~~~~~~~ 214 (243)
T 3bkw_A 155 PGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKGVVKHHRTVGTTLNALIRSGFAIEHVEEF 214 (243)
T ss_dssp CSCEECTTSCEEEEECCTTCCEEECTTHHHHSCCEEECCHHHHHHHHHHTTCEEEEEEEC
T ss_pred cceeecCCCceEEeecccccccceeeeeccCceEEEeccHHHHHHHHHHcCCEeeeeccC
Confidence 00000000 0000000000 00001111111 12358999999999999999988765
No 32
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.89 E-value=2.9e-23 Score=161.10 Aligned_cols=196 Identities=15% Similarity=0.108 Sum_probs=135.6
Q ss_pred CchhHHHHhhhhhhhhhhhhhhhhhhh-HHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChh
Q 025144 27 CSSERQELFSRIAPVYDNLNDLLSFGQ-HRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKN 105 (257)
Q Consensus 27 ~~~~~~~~y~~~a~~y~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~ 105 (257)
..+.+.++|+..+..|+.......... .......+...+...++.+|||+|||+|..+..+++. +.+++++|+|+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~ 85 (227)
T 3e8s_A 9 PEDALLDSWHQNAQAWIDAVRHGAIESRRQVTDQAILLAILGRQPERVLDLGCGEGWLLRALADR---GIEAVGVDGDRT 85 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCHHHHHTHHHHHHHHHHHTCCSEEEEETCTTCHHHHHHHTT---TCEEEEEESCHH
T ss_pred HHHHHHHHHHhhHHHHHHHhcccccccccccccHHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHC---CCEEEEEcCCHH
Confidence 357789999999999987543322212 1123344444454556689999999999999999876 569999999999
Q ss_pred HHHHHHhhhhhhhhccCCCeeEEEccCCCC---CC-CCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeecC
Q 025144 106 QLSMASSRQDLVSKACYKNIEWVEGDALDL---PF-SDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNK 181 (257)
Q Consensus 106 ~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~---~~-~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 181 (257)
+++.++++ .++.+...|+.++ +. ++++||+|++..+++ .+++..++++++++|||||.+++.+++.
T Consensus 86 ~~~~a~~~---------~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 155 (227)
T 3e8s_A 86 LVDAARAA---------GAGEVHLASYAQLAEAKVPVGKDYDLICANFALL-HQDIIELLSAMRTLLVPGGALVIQTLHP 155 (227)
T ss_dssp HHHHHHHT---------CSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC-SSCCHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred HHHHHHHh---------cccccchhhHHhhcccccccCCCccEEEECchhh-hhhHHHHHHHHHHHhCCCeEEEEEecCc
Confidence 99999887 3677888887765 33 345599999999999 8899999999999999999999988765
Q ss_pred CCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHHHHhccCCHHHHHHHHHHcCceeeEEeee
Q 025144 182 STQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYEL 245 (257)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 245 (257)
...........|.. ....+....+ ......+++.+++.++|+++||+++++.+.
T Consensus 156 ~~~~~~~~~~~~~~-------~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 209 (227)
T 3e8s_A 156 WSVADGDYQDGWRE-------ESFAGFAGDW---QPMPWYFRTLASWLNALDMAGLRLVSLQEP 209 (227)
T ss_dssp TTTCTTCCSCEEEE-------ECCTTSSSCC---CCEEEEECCHHHHHHHHHHTTEEEEEEECC
T ss_pred cccCccccccccch-------hhhhccccCc---ccceEEEecHHHHHHHHHHcCCeEEEEecC
Confidence 33221100000000 0000000000 001123569999999999999999988763
No 33
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.89 E-value=1.9e-22 Score=154.94 Aligned_cols=171 Identities=17% Similarity=0.113 Sum_probs=133.4
Q ss_pred CchhHHHHhhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhH
Q 025144 27 CSSERQELFSRIAPVYDNLNDLLSFGQHRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQ 106 (257)
Q Consensus 27 ~~~~~~~~y~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~ 106 (257)
..+...++|+..+..|+..... ...+...+ ..+.++.+|||+|||+|.++..+++. +.+++++|+|+.+
T Consensus 9 ~~~~~~~~~~~~~~~y~~~~~~-----~~~~~~~~---~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~ 77 (211)
T 3e23_A 9 FDDDTLRFYRGNATAYAERQPR-----SATLTKFL---GELPAGAKILELGCGAGYQAEAMLAA---GFDVDATDGSPEL 77 (211)
T ss_dssp SCHHHHHHHHHSHHHHTTCCCC-----CHHHHHHH---TTSCTTCEEEESSCTTSHHHHHHHHT---TCEEEEEESCHHH
T ss_pred ccHHHHHHHHHHHHHHhhccch-----hHHHHHHH---HhcCCCCcEEEECCCCCHHHHHHHHc---CCeEEEECCCHHH
Confidence 3567889999999999887543 22222221 23456789999999999999999876 5699999999999
Q ss_pred HHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEecccccCcc--cHHHHHHHHHhcccCCCEEEEEeecCCCc
Q 025144 107 LSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGYGLRNVV--DKRKALEESFRVLKPGSRISVLDFNKSTQ 184 (257)
Q Consensus 107 ~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~--~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~ 184 (257)
++.++++. ++.+..+|+.+++ ++++||+|++..++++++ ++..++++++++|||||.+++........
T Consensus 78 ~~~a~~~~---------~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 147 (211)
T 3e23_A 78 AAEASRRL---------GRPVRTMLFHQLD-AIDAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGE 147 (211)
T ss_dssp HHHHHHHH---------TSCCEECCGGGCC-CCSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSC
T ss_pred HHHHHHhc---------CCceEEeeeccCC-CCCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcc
Confidence 99999875 5678889998877 678999999999999997 78899999999999999998876544321
Q ss_pred hhHHHHHHHHHhhhhhhhhccCCchhhhhhhHHHHhccCCHHHHHHHHHHcC-ceeeEEeee
Q 025144 185 PFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIG-FSRAKHYEL 245 (257)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~ 245 (257)
.... .. ....+++.+++.++++++| |++++....
T Consensus 148 ~~~~-------------------~~--------~~~~~~~~~~~~~~l~~aG~f~~~~~~~~ 182 (211)
T 3e23_A 148 GRDK-------------------LA--------RYYNYPSEEWLRARYAEAGTWASVAVESS 182 (211)
T ss_dssp EECT-------------------TS--------CEECCCCHHHHHHHHHHHCCCSEEEEEEE
T ss_pred cccc-------------------cc--------hhccCCCHHHHHHHHHhCCCcEEEEEEec
Confidence 1000 00 0013579999999999999 999987765
No 34
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.89 E-value=5.1e-21 Score=159.05 Aligned_cols=175 Identities=15% Similarity=0.087 Sum_probs=134.2
Q ss_pred HHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCC
Q 025144 59 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFS 138 (257)
Q Consensus 59 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 138 (257)
..+...+...+..+|||+|||+|..+..+++.+ |+.+++++|+ +.+++.+++++...+.. +++++..+|+.+ +.+
T Consensus 192 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~l~--~~v~~~~~d~~~-~~p 266 (369)
T 3gwz_A 192 GQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAF-PGLRGTLLER-PPVAEEARELLTGRGLA--DRCEILPGDFFE-TIP 266 (369)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCT--TTEEEEECCTTT-CCC
T ss_pred HHHHHhCCCccCcEEEEeCCCccHHHHHHHHHC-CCCeEEEEcC-HHHHHHHHHhhhhcCcC--CceEEeccCCCC-CCC
Confidence 344455566778899999999999999999985 7789999999 99999999987654432 689999999984 455
Q ss_pred CCcccEEEecccccCcccHH--HHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhH
Q 025144 139 DCFFDAITMGYGLRNVVDKR--KALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLK 216 (257)
Q Consensus 139 ~~~~D~v~~~~~l~~~~~~~--~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (257)
. .||+|++.+++|++++.. ++|++++++|+|||.+++.+...+...... ..+....+. .
T Consensus 267 ~-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~--~~~~d~~~~----------------~ 327 (369)
T 3gwz_A 267 D-GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAAS--TLFVDLLLL----------------V 327 (369)
T ss_dssp S-SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHH--HHHHHHHHH----------------H
T ss_pred C-CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCc--hhHhhHHHH----------------h
Confidence 4 799999999999998765 799999999999999999987765543211 111110100 0
Q ss_pred HHHhccCCHHHHHHHHHHcCceeeEEeeecCceeEEEeeeC
Q 025144 217 SSIREFLTGKDLEKLALEIGFSRAKHYELSGGLMGNLVATR 257 (257)
Q Consensus 217 ~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~g~~~~~~~~k 257 (257)
......++.++|+++|+++||++++++....+...++.++|
T Consensus 328 ~~~g~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~svie~~~ 368 (369)
T 3gwz_A 328 LVGGAERSESEFAALLEKSGLRVERSLPCGAGPVRIVEIRR 368 (369)
T ss_dssp HHSCCCBCHHHHHHHHHTTTEEEEEEEECSSSSEEEEEEEE
T ss_pred hcCCccCCHHHHHHHHHHCCCeEEEEEECCCCCcEEEEEEe
Confidence 01123568999999999999999999885566677777764
No 35
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.89 E-value=1.6e-22 Score=159.71 Aligned_cols=156 Identities=14% Similarity=0.069 Sum_probs=122.7
Q ss_pred HHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC
Q 025144 57 WKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP 136 (257)
Q Consensus 57 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~ 136 (257)
+...++..+...++.+|||+|||+|..+..+++.. ..+++++|+|+.+++.++++.... .++.++++|+.+++
T Consensus 81 ~~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~~~~~ 153 (254)
T 1xtp_A 81 GSRNFIASLPGHGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGM-----PVGKFILASMETAT 153 (254)
T ss_dssp HHHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTS-----SEEEEEESCGGGCC
T ss_pred HHHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccC-----CceEEEEccHHHCC
Confidence 33455555566678899999999999999998874 457999999999999999887542 47899999999888
Q ss_pred CCCCcccEEEecccccCc--ccHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhh
Q 025144 137 FSDCFFDAITMGYGLRNV--VDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQY 214 (257)
Q Consensus 137 ~~~~~~D~v~~~~~l~~~--~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (257)
+++++||+|++..+++|+ +++..++++++++|||||.+++.+......... . . .
T Consensus 154 ~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~-------~-----~---~--------- 209 (254)
T 1xtp_A 154 LPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFL-------V-----D---K--------- 209 (254)
T ss_dssp CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEE-------E-----E---T---------
T ss_pred CCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccce-------e-----c---c---------
Confidence 778899999999999999 458899999999999999999987543221100 0 0 0
Q ss_pred hHHHHhccCCHHHHHHHHHHcCceeeEEeee
Q 025144 215 LKSSIREFLTGKDLEKLALEIGFSRAKHYEL 245 (257)
Q Consensus 215 ~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 245 (257)
......++.+++.++|+++||++++....
T Consensus 210 --~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 238 (254)
T 1xtp_A 210 --EDSSLTRSDIHYKRLFNESGVRVVKEAFQ 238 (254)
T ss_dssp --TTTEEEBCHHHHHHHHHHHTCCEEEEEEC
T ss_pred --cCCcccCCHHHHHHHHHHCCCEEEEeeec
Confidence 00012458899999999999999987654
No 36
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.88 E-value=8.4e-22 Score=157.81 Aligned_cols=162 Identities=18% Similarity=0.185 Sum_probs=122.4
Q ss_pred HHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCC
Q 025144 60 MAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSD 139 (257)
Q Consensus 60 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 139 (257)
.+...+...++.+|||+|||+|.++..+++ ++.+|+++|+|+.|++.++++. +++.+..+|+.++++ +
T Consensus 48 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~-~ 115 (279)
T 3ccf_A 48 DLLQLLNPQPGEFILDLGCGTGQLTEKIAQ---SGAEVLGTDNAATMIEKARQNY--------PHLHFDVADARNFRV-D 115 (279)
T ss_dssp HHHHHHCCCTTCEEEEETCTTSHHHHHHHH---TTCEEEEEESCHHHHHHHHHHC--------TTSCEEECCTTTCCC-S
T ss_pred HHHHHhCCCCCCEEEEecCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHhhC--------CCCEEEECChhhCCc-C
Confidence 344556677888999999999999999987 3679999999999999998875 578999999999876 5
Q ss_pred CcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeecCCCch-hHHHHHHHHHhhhhhhhhccCCchhhhhhhHHH
Q 025144 140 CFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQP-FTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSS 218 (257)
Q Consensus 140 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (257)
++||+|++..++++++++..++++++++|||||.+++..+...... ....+........ .. . ..+ ..
T Consensus 116 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~-~~~----~~ 183 (279)
T 3ccf_A 116 KPLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYNALETLG-IH------N-PQA----LN 183 (279)
T ss_dssp SCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHHHHHHHHT-CC------C-GGG----GC
T ss_pred CCcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHhcC-Cc------c-ccC----cC
Confidence 7899999999999999999999999999999999998876654321 1111111111100 00 0 000 00
Q ss_pred HhccCCHHHHHHHHHHcCceeeEEeee
Q 025144 219 IREFLTGKDLEKLALEIGFSRAKHYEL 245 (257)
Q Consensus 219 ~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 245 (257)
...+++.+++.++|+++||++++....
T Consensus 184 ~~~~~~~~~~~~~l~~aGf~~~~~~~~ 210 (279)
T 3ccf_A 184 PWYFPSIGEYVNILEKQGFDVTYAALF 210 (279)
T ss_dssp CCCCCCHHHHHHHHHHHTEEEEEEEEE
T ss_pred ceeCCCHHHHHHHHHHcCCEEEEEEEe
Confidence 013568999999999999999876654
No 37
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.88 E-value=1.1e-22 Score=159.50 Aligned_cols=146 Identities=15% Similarity=0.094 Sum_probs=116.7
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEe
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 147 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 147 (257)
.++.+|||+|||+|..+..+++.. ..+++++|+|+.+++.++++....+. .++.++.+|+.++++++++||+|++
T Consensus 78 ~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~---~~~~~~~~d~~~~~~~~~~fD~v~~ 152 (241)
T 2ex4_A 78 TGTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEGK---RVRNYFCCGLQDFTPEPDSYDVIWI 152 (241)
T ss_dssp CCCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGGG---GEEEEEECCGGGCCCCSSCEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcCC---ceEEEEEcChhhcCCCCCCEEEEEE
Confidence 357899999999999999988763 45999999999999999998765421 4789999999888877779999999
Q ss_pred cccccCccc--HHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHHHHhccCCH
Q 025144 148 GYGLRNVVD--KRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTG 225 (257)
Q Consensus 148 ~~~l~~~~~--~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (257)
..+++++++ ...+++++.++|||||.+++.+.......... .. ......+.
T Consensus 153 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~------------~~---------------~~~~~~~~ 205 (241)
T 2ex4_A 153 QWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILD------------DV---------------DSSVCRDL 205 (241)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEE------------TT---------------TTEEEEBH
T ss_pred cchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceec------------cc---------------CCcccCCH
Confidence 999999987 44899999999999999999886654311000 00 00113478
Q ss_pred HHHHHHHHHcCceeeEEeee
Q 025144 226 KDLEKLALEIGFSRAKHYEL 245 (257)
Q Consensus 226 ~~~~~~l~~~Gf~~~~~~~~ 245 (257)
+++.++++++||++++....
T Consensus 206 ~~~~~~l~~aGf~~~~~~~~ 225 (241)
T 2ex4_A 206 DVVRRIICSAGLSLLAEERQ 225 (241)
T ss_dssp HHHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHHHcCCeEEEeeec
Confidence 99999999999999988754
No 38
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.88 E-value=2.1e-21 Score=149.13 Aligned_cols=135 Identities=24% Similarity=0.292 Sum_probs=108.7
Q ss_pred HHhhhhhhhhhhhhhhhhhhhH-HHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCc-eEEEEeCChhHHHHH
Q 025144 33 ELFSRIAPVYDNLNDLLSFGQH-RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQG-KVIGLDFSKNQLSMA 110 (257)
Q Consensus 33 ~~y~~~a~~y~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~-~v~~~D~s~~~~~~a 110 (257)
++|+..+..|+.+......... ....+.+..... ++.+|||+|||+|..+..+ +. +++++|+|+.+++.+
T Consensus 1 ~~fd~~a~~y~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~vLdiG~G~G~~~~~l------~~~~v~~vD~s~~~~~~a 72 (211)
T 2gs9_A 1 DPFASLAEAYEAWYGTPLGAYVIAEEERALKGLLP--PGESLLEVGAGTGYWLRRL------PYPQKVGVEPSEAMLAVG 72 (211)
T ss_dssp CTTTTTTTTTTGGGGSHHHHHHHHHHHHHHHTTCC--CCSEEEEETCTTCHHHHHC------CCSEEEEECCCHHHHHHH
T ss_pred CchhhHHHHHHHHhcccchhhhHHHHHHHHHHhcC--CCCeEEEECCCCCHhHHhC------CCCeEEEEeCCHHHHHHH
Confidence 3688888889887554222111 222333333332 7789999999999988776 24 899999999999999
Q ss_pred HhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeecCCC
Q 025144 111 SSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKST 183 (257)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~ 183 (257)
+++. .++.++++|+.++++++++||+|++..+++|++++..++++++++|||||.+++.+++...
T Consensus 73 ~~~~--------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 137 (211)
T 2gs9_A 73 RRRA--------PEATWVRAWGEALPFPGESFDVVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGVLEALS 137 (211)
T ss_dssp HHHC--------TTSEEECCCTTSCCSCSSCEEEEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEECTTS
T ss_pred HHhC--------CCcEEEEcccccCCCCCCcEEEEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEecCCcC
Confidence 9876 4789999999998888889999999999999999999999999999999999998877644
No 39
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.88 E-value=1.6e-21 Score=152.55 Aligned_cols=210 Identities=16% Similarity=0.147 Sum_probs=133.1
Q ss_pred HHhh-hhhhhhhhhhhhhhhh---hHHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHH
Q 025144 33 ELFS-RIAPVYDNLNDLLSFG---QHRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLS 108 (257)
Q Consensus 33 ~~y~-~~a~~y~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~ 108 (257)
++|+ .++..|+......... ....+.+.+.... .++.+|||+|||+|..+..+++.. .+++++|+|+.+++
T Consensus 2 ~~y~~~~a~~yd~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~ 76 (239)
T 3bxo_A 2 HMYEVDHADVYDLFYLGRGKDYAAEASDIADLVRSRT--PEASSLLDVACGTGTHLEHFTKEF---GDTAGLELSEDMLT 76 (239)
T ss_dssp --CCCCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHC--TTCCEEEEETCTTSHHHHHHHHHH---SEEEEEESCHHHHH
T ss_pred ccccchhHHHHHHHhhccHhhHHHHHHHHHHHHHHhc--CCCCeEEEecccCCHHHHHHHHhC---CcEEEEeCCHHHHH
Confidence 5677 7778887765321111 1122223333333 567899999999999999999884 38999999999999
Q ss_pred HHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEe-cccccCc---ccHHHHHHHHHhcccCCCEEEEEeecCCCc
Q 025144 109 MASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM-GYGLRNV---VDKRKALEESFRVLKPGSRISVLDFNKSTQ 184 (257)
Q Consensus 109 ~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~-~~~l~~~---~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~ 184 (257)
.++++. +++.+.++|+.+++. +++||+|++ ..+++|+ ++...++++++++|||||.+++.++..+..
T Consensus 77 ~a~~~~--------~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 147 (239)
T 3bxo_A 77 HARKRL--------PDATLHQGDMRDFRL-GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWFPET 147 (239)
T ss_dssp HHHHHC--------TTCEEEECCTTTCCC-SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCCTTT
T ss_pred HHHHhC--------CCCEEEECCHHHccc-CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccCccc
Confidence 999875 578999999998776 678999995 4588888 456889999999999999998876554332
Q ss_pred hhHHHHHHHHHh--h-hhhh------hhc-------cC-Cchh-hhh-hhHHHHhccCCHHHHHHHHHHcCceeeEEeee
Q 025144 185 PFTTAIQEWMID--N-VVVP------VAS-------GY-GLAE-EYQ-YLKSSIREFLTGKDLEKLALEIGFSRAKHYEL 245 (257)
Q Consensus 185 ~~~~~~~~~~~~--~-~~~~------~~~-------~~-~~~~-~~~-~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 245 (257)
........+... . .... ... .. .... ... .......++++.++++++|+++||++......
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGF~v~~~~~~ 227 (239)
T 3bxo_A 148 FADGWVSADVVRRDGRTVARVSHSVREGNATRMEVHFTVADPGKGVRHFSDVHLITLFHQAEYEAAFTAAGLRVEYLEGG 227 (239)
T ss_dssp CCTTCEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESST
T ss_pred ccccceEeeEEecCCceEEEEEEEecCCCEEEEEEEEEEecCCCcceEEEEEEEeeecCHHHHHHHHHHCCCEEEEeEcC
Confidence 100000000000 0 0000 000 00 0000 000 00001124679999999999999977665544
Q ss_pred cCceeEEEeeeC
Q 025144 246 SGGLMGNLVATR 257 (257)
Q Consensus 246 ~~g~~~~~~~~k 257 (257)
.+...+++|+|
T Consensus 228 -~~~~~~~va~K 238 (239)
T 3bxo_A 228 -PSGRGLFVGVP 238 (239)
T ss_dssp -TTSSCEEEEEE
T ss_pred -CCCceEEEEec
Confidence 44566777765
No 40
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.88 E-value=2.4e-21 Score=158.01 Aligned_cols=163 Identities=15% Similarity=0.178 Sum_probs=125.6
Q ss_pred HHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCC
Q 025144 58 KRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF 137 (257)
Q Consensus 58 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~ 137 (257)
.+.+...+...++.+|||+|||+|..+..+++.+ +.+|+++|+|+.+++.++++....+.. .++.+..+|+.+++
T Consensus 79 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~- 153 (318)
T 2fk8_A 79 VDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERF--DVNVIGLTLSKNQHARCEQVLASIDTN--RSRQVLLQGWEDFA- 153 (318)
T ss_dssp HHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTSCCS--SCEEEEESCGGGCC-
T ss_pred HHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCC--CceEEEECChHHCC-
Confidence 3445555667788999999999999999999886 569999999999999999987654432 46999999998763
Q ss_pred CCCcccEEEecccccCc--ccHHHHHHHHHhcccCCCEEEEEeecCCCchhHH-----------HHHHHHHhhhhhhhhc
Q 025144 138 SDCFFDAITMGYGLRNV--VDKRKALEESFRVLKPGSRISVLDFNKSTQPFTT-----------AIQEWMIDNVVVPVAS 204 (257)
Q Consensus 138 ~~~~~D~v~~~~~l~~~--~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~ 204 (257)
++||+|++..+++|+ +++..+++++.++|||||.+++.++......... ....+..... .
T Consensus 154 --~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---- 226 (318)
T 2fk8_A 154 --EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEI-F---- 226 (318)
T ss_dssp --CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHT-S----
T ss_pred --CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhc-C----
Confidence 789999999999999 6889999999999999999999988765532210 0001111000 0
Q ss_pred cCCchhhhhhhHHHHhccCCHHHHHHHHHHcCceeeEEeee
Q 025144 205 GYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYEL 245 (257)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 245 (257)
....+.+.+++.++++++||++++...+
T Consensus 227 -------------~~~~~~s~~~~~~~l~~aGf~~~~~~~~ 254 (318)
T 2fk8_A 227 -------------PGGRLPSTEMMVEHGEKAGFTVPEPLSL 254 (318)
T ss_dssp -------------TTCCCCCHHHHHHHHHHTTCBCCCCEEC
T ss_pred -------------CCCcCCCHHHHHHHHHhCCCEEEEEEec
Confidence 0013568999999999999999887665
No 41
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.87 E-value=6.9e-21 Score=157.90 Aligned_cols=172 Identities=17% Similarity=0.143 Sum_probs=127.5
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC--CCCCCcccEE
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL--PFSDCFFDAI 145 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~D~v 145 (257)
.+..+|||||||+|..+..+++.+ |+.+++++|+ +.+++.+++++...+.. .++.++.+|+.+. +++ ++||+|
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~~p-~~~D~v 252 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYN-KEVEVTIVDL-PQQLEMMRKQTAGLSGS--ERIHGHGANLLDRDVPFP-TGFDAV 252 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHS-TTCEEEEEEC-HHHHHHHHHHHTTCTTG--GGEEEEECCCCSSSCCCC-CCCSEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeC-HHHHHHHHHHHHhcCcc--cceEEEEccccccCCCCC-CCcCEE
Confidence 456799999999999999999985 7789999999 99999999987654432 5899999999885 355 789999
Q ss_pred EecccccCcccH--HHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHHHHhccC
Q 025144 146 TMGYGLRNVVDK--RKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFL 223 (257)
Q Consensus 146 ~~~~~l~~~~~~--~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (257)
++..++|++++. ..+|++++++|||||.+++.+...+..........+............ ...+.+
T Consensus 253 ~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~ 320 (363)
T 3dp7_A 253 WMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMAN------------GNSKMF 320 (363)
T ss_dssp EEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSC------------SSCCSC
T ss_pred EEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhC------------CCCccc
Confidence 999999999754 578999999999999999998776554332211111100000000000 001356
Q ss_pred CHHHHHHHHHHcCceeeEEeeecCceeEEEeee
Q 025144 224 TGKDLEKLALEIGFSRAKHYELSGGLMGNLVAT 256 (257)
Q Consensus 224 ~~~~~~~~l~~~Gf~~~~~~~~~~g~~~~~~~~ 256 (257)
+.+++.++|+++||+++++....+....++.++
T Consensus 321 t~~e~~~ll~~AGf~~v~~~~~~g~~~svi~~~ 353 (363)
T 3dp7_A 321 HSDDLIRCIENAGLEVEEIQDNIGLGHSILQCR 353 (363)
T ss_dssp CHHHHHHHHHTTTEEESCCCCCBTTTBEEEEEE
T ss_pred CHHHHHHHHHHcCCeEEEEEeCCCCCceEEEEe
Confidence 899999999999999999887766556666554
No 42
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.87 E-value=1.1e-20 Score=155.07 Aligned_cols=175 Identities=14% Similarity=0.215 Sum_probs=128.9
Q ss_pred HHHhhhCC--CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCC
Q 025144 60 MAVSWSGA--KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF 137 (257)
Q Consensus 60 ~~~~~~~~--~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~ 137 (257)
.+...+.. .++.+|||+|||+|..+..+++.+ |+.+++++|++ .+++.+++++...+.. .++.+..+|+.+.++
T Consensus 154 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~~-~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~ 229 (335)
T 2r3s_A 154 LIAQLVNENKIEPLKVLDISASHGLFGIAVAQHN-PNAEIFGVDWA-SVLEVAKENARIQGVA--SRYHTIAGSAFEVDY 229 (335)
T ss_dssp HHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEECH-HHHHHHHHHHHHHTCG--GGEEEEESCTTTSCC
T ss_pred HHHHhcccccCCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEEecH-HHHHHHHHHHHhcCCC--cceEEEecccccCCC
Confidence 34444555 677899999999999999999985 67899999999 9999999987654432 479999999988666
Q ss_pred CCCcccEEEecccccCcc--cHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhh
Q 025144 138 SDCFFDAITMGYGLRNVV--DKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYL 215 (257)
Q Consensus 138 ~~~~~D~v~~~~~l~~~~--~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (257)
++ .||+|++.+++|+++ +...++++++++|+|||.+++.+...+..........++...+....
T Consensus 230 ~~-~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~------------- 295 (335)
T 2r3s_A 230 GN-DYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATT------------- 295 (335)
T ss_dssp CS-CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHS-------------
T ss_pred CC-CCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeC-------------
Confidence 54 499999999999995 45799999999999999999998776543211111111110000000
Q ss_pred HHHHhccCCHHHHHHHHHHcCceeeEEeeecCceeEEEee
Q 025144 216 KSSIREFLTGKDLEKLALEIGFSRAKHYELSGGLMGNLVA 255 (257)
Q Consensus 216 ~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~g~~~~~~~ 255 (257)
.....++.+++.++++++||+++++....+.. .++++
T Consensus 296 --~~~~~~t~~~~~~ll~~aGf~~~~~~~~~~~~-~~i~~ 332 (335)
T 2r3s_A 296 --PNGDAYTFAEYESMFSNAGFSHSQLHSLPTTQ-QQVIV 332 (335)
T ss_dssp --SSCCCCCHHHHHHHHHHTTCSEEEEECCTTSS-SEEEE
T ss_pred --CCCCcCCHHHHHHHHHHCCCCeeeEEECCCCc-eeEEE
Confidence 01245689999999999999999988775543 44444
No 43
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.87 E-value=1.1e-20 Score=155.95 Aligned_cols=174 Identities=17% Similarity=0.170 Sum_probs=130.9
Q ss_pred HHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCC
Q 025144 60 MAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSD 139 (257)
Q Consensus 60 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 139 (257)
.+...+...+..+|+|||||+|..+..+++.+ |+.++++.|. |.+++.++++..... .++++++.+|+.+.+.
T Consensus 170 ~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~-p~~~~~~~dl-p~v~~~a~~~~~~~~---~~rv~~~~gD~~~~~~-- 242 (353)
T 4a6d_A 170 SVLTAFDLSVFPLMCDLGGGAGALAKECMSLY-PGCKITVFDI-PEVVWTAKQHFSFQE---EEQIDFQEGDFFKDPL-- 242 (353)
T ss_dssp HHHHSSCGGGCSEEEEETCTTSHHHHHHHHHC-SSCEEEEEEC-HHHHHHHHHHSCC-----CCSEEEEESCTTTSCC--
T ss_pred HHHHhcCcccCCeEEeeCCCCCHHHHHHHHhC-CCceeEeccC-HHHHHHHHHhhhhcc---cCceeeecCccccCCC--
Confidence 34444455667899999999999999999995 7889999997 889999988775433 2689999999987544
Q ss_pred CcccEEEecccccCcccH--HHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHH
Q 025144 140 CFFDAITMGYGLRNVVDK--RKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKS 217 (257)
Q Consensus 140 ~~~D~v~~~~~l~~~~~~--~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (257)
..+|++++.+++|+++|. .++|++++++|+|||.+++.+...+...........+.-.++....+
T Consensus 243 ~~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g------------- 309 (353)
T 4a6d_A 243 PEADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEG------------- 309 (353)
T ss_dssp CCCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSC-------------
T ss_pred CCceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCC-------------
Confidence 358999999999999864 67899999999999999999876544322111112221111111111
Q ss_pred HHhccCCHHHHHHHHHHcCceeeEEeeecCceeEEEeeeC
Q 025144 218 SIREFLTGKDLEKLALEIGFSRAKHYELSGGLMGNLVATR 257 (257)
Q Consensus 218 ~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~g~~~~~~~~k 257 (257)
..++.++|+++|+++||++++++.. ++...+++|+|
T Consensus 310 ---~ert~~e~~~ll~~AGf~~v~v~~~-~~~~~~i~ArK 345 (353)
T 4a6d_A 310 ---QERTPTHYHMLLSSAGFRDFQFKKT-GAIYDAILARK 345 (353)
T ss_dssp ---CCCCHHHHHHHHHHHTCEEEEEECC-SSSCEEEEEEC
T ss_pred ---cCCCHHHHHHHHHHCCCceEEEEEc-CCceEEEEEEe
Confidence 2458899999999999999998876 56678889987
No 44
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.87 E-value=6.9e-22 Score=146.70 Aligned_cols=147 Identities=18% Similarity=0.220 Sum_probs=121.0
Q ss_pred hCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccE
Q 025144 65 SGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDA 144 (257)
Q Consensus 65 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 144 (257)
+...++.+|||+|||+|..+..+++.. .+++++|+++.+++.++++. +++.+..+| .++++++||+
T Consensus 13 ~~~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~--------~~v~~~~~d---~~~~~~~~D~ 78 (170)
T 3i9f_A 13 IFEGKKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEKF--------DSVITLSDP---KEIPDNSVDF 78 (170)
T ss_dssp HHSSCCEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHHC--------TTSEEESSG---GGSCTTCEEE
T ss_pred cCcCCCCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHhC--------CCcEEEeCC---CCCCCCceEE
Confidence 345677899999999999999999773 49999999999999999883 689999999 4566789999
Q ss_pred EEecccccCcccHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHHHHhccCC
Q 025144 145 ITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLT 224 (257)
Q Consensus 145 v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (257)
|++..++++++++..+++++.++|||||.+++.++......... .....++
T Consensus 79 v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~-----------------------------~~~~~~~ 129 (170)
T 3i9f_A 79 ILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRKENTGIGP-----------------------------PLSIRMD 129 (170)
T ss_dssp EEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSS-----------------------------CGGGCCC
T ss_pred EEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCccccccCc-----------------------------hHhhhcC
Confidence 99999999999999999999999999999999887754422110 0013568
Q ss_pred HHHHHHHHHHcCceeeEEeeecCceeEEEeee
Q 025144 225 GKDLEKLALEIGFSRAKHYELSGGLMGNLVAT 256 (257)
Q Consensus 225 ~~~~~~~l~~~Gf~~~~~~~~~~g~~~~~~~~ 256 (257)
.+++.++++ ||++++........+.++..+
T Consensus 130 ~~~~~~~l~--Gf~~~~~~~~~~~~~~l~~~~ 159 (170)
T 3i9f_A 130 EKDYMGWFS--NFVVEKRFNPTPYHFGLVLKR 159 (170)
T ss_dssp HHHHHHHTT--TEEEEEEECSSTTEEEEEEEE
T ss_pred HHHHHHHHh--CcEEEEccCCCCceEEEEEec
Confidence 999999998 999999988876666655543
No 45
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.87 E-value=2.3e-20 Score=153.25 Aligned_cols=174 Identities=16% Similarity=0.159 Sum_probs=128.9
Q ss_pred HHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCC
Q 025144 59 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFS 138 (257)
Q Consensus 59 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 138 (257)
..+...+...+ .+|||+|||+|..+..+++.+ |+.+++++|+ +.+++.+++++...+.. .++.++.+|+.+ +++
T Consensus 158 ~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~-~~~ 231 (334)
T 2ip2_A 158 HEIPRLLDFRG-RSFVDVGGGSGELTKAILQAE-PSARGVMLDR-EGSLGVARDNLSSLLAG--ERVSLVGGDMLQ-EVP 231 (334)
T ss_dssp HHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-TTCTHHHHHHTHHHHHT--TSEEEEESCTTT-CCC
T ss_pred HHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHC-CCCEEEEeCc-HHHHHHHHHHHhhcCCC--CcEEEecCCCCC-CCC
Confidence 33444445555 899999999999999999985 6789999999 99999999987654432 589999999987 554
Q ss_pred CCcccEEEecccccCcccHH--HHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhH
Q 025144 139 DCFFDAITMGYGLRNVVDKR--KALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLK 216 (257)
Q Consensus 139 ~~~~D~v~~~~~l~~~~~~~--~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (257)
++||+|++.+++|++++.. .++++++++|+|||.+++.+...+..... .....+...+..
T Consensus 232 -~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~-~~~~~~~~~~~~---------------- 293 (334)
T 2ip2_A 232 -SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPS-PMSVLWDVHLFM---------------- 293 (334)
T ss_dssp -SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCC-HHHHHHHHHHHH----------------
T ss_pred -CCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCc-chhHHhhhHhHh----------------
Confidence 6799999999999997655 89999999999999999998765432110 111111100000
Q ss_pred HHHhccCCHHHHHHHHHHcCceeeEEeeecCceeEEEeeeC
Q 025144 217 SSIREFLTGKDLEKLALEIGFSRAKHYELSGGLMGNLVATR 257 (257)
Q Consensus 217 ~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~g~~~~~~~~k 257 (257)
......++.++|.++++++||++++.+... +...++.++|
T Consensus 294 ~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~-~~~~~i~~~~ 333 (334)
T 2ip2_A 294 ACAGRHRTTEEVVDLLGRGGFAVERIVDLP-METRMIVAAR 333 (334)
T ss_dssp HHSCCCCBHHHHHHHHHHTTEEEEEEEEET-TTEEEEEEEE
T ss_pred hCCCcCCCHHHHHHHHHHCCCceeEEEECC-CCCEEEEEEe
Confidence 001134589999999999999999988764 4466666654
No 46
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.87 E-value=2.6e-21 Score=155.34 Aligned_cols=112 Identities=21% Similarity=0.284 Sum_probs=99.6
Q ss_pred hhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCccc
Q 025144 64 WSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFD 143 (257)
Q Consensus 64 ~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 143 (257)
.....++.+|||+|||+|.++..+++.++++.+|+++|+|+.+++.++++....+ .++.++++|+.+++++ ++||
T Consensus 17 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~----~~v~~~~~d~~~~~~~-~~fD 91 (284)
T 3gu3_A 17 VWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLP----YDSEFLEGDATEIELN-DKYD 91 (284)
T ss_dssp TSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSS----SEEEEEESCTTTCCCS-SCEE
T ss_pred HhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcC----CceEEEEcchhhcCcC-CCee
Confidence 3466788899999999999999999886435799999999999999999876543 4899999999998774 6899
Q ss_pred EEEecccccCcccHHHHHHHHHhcccCCCEEEEEeec
Q 025144 144 AITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 144 ~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
+|++..++++++++..++++++++|||||.+++.++.
T Consensus 92 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 92 IAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp EEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 9999999999999999999999999999999988766
No 47
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.87 E-value=4.4e-22 Score=156.84 Aligned_cols=133 Identities=20% Similarity=0.277 Sum_probs=97.5
Q ss_pred HHHhhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHH
Q 025144 32 QELFSRIAPVYDNLNDLLSFGQHRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMAS 111 (257)
Q Consensus 32 ~~~y~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~ 111 (257)
++.|+..++.|+....... ..+.+.+.... ..+.+|||||||+|..+..+++. +.+|+|+|+|+.|++.|+
T Consensus 8 ~d~F~~~a~~Y~~~Rp~yp----~~l~~~l~~~~--~~~~~vLDvGcGtG~~~~~l~~~---~~~v~gvD~s~~ml~~a~ 78 (257)
T 4hg2_A 8 KDHFTPVADAYRAFRPRYP----RALFRWLGEVA--PARGDALDCGCGSGQASLGLAEF---FERVHAVDPGEAQIRQAL 78 (257)
T ss_dssp ------------CCCCCCC----HHHHHHHHHHS--SCSSEEEEESCTTTTTHHHHHTT---CSEEEEEESCHHHHHTCC
T ss_pred HHHHHHHHHHHHHHCCCcH----HHHHHHHHHhc--CCCCCEEEEcCCCCHHHHHHHHh---CCEEEEEeCcHHhhhhhh
Confidence 5668888888887643221 22333343333 34569999999999999999876 469999999999998876
Q ss_pred hhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeecCCC
Q 025144 112 SRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKST 183 (257)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~ 183 (257)
+. +++.++++|++++++++++||+|++..++|++ ++..++++++++|||||.|++..+..+.
T Consensus 79 ~~---------~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~~-~~~~~~~e~~rvLkpgG~l~~~~~~~~~ 140 (257)
T 4hg2_A 79 RH---------PRVTYAVAPAEDTGLPPASVDVAIAAQAMHWF-DLDRFWAELRRVARPGAVFAAVTYGLTR 140 (257)
T ss_dssp CC---------TTEEEEECCTTCCCCCSSCEEEEEECSCCTTC-CHHHHHHHHHHHEEEEEEEEEEEECCCB
T ss_pred hc---------CCceeehhhhhhhcccCCcccEEEEeeehhHh-hHHHHHHHHHHHcCCCCEEEEEECCCCC
Confidence 43 68999999999999999999999999999887 5788999999999999999988776543
No 48
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.87 E-value=1.4e-20 Score=150.29 Aligned_cols=178 Identities=20% Similarity=0.258 Sum_probs=128.3
Q ss_pred HHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChh------HHHHHHhhhhhhhhccCCCeeEEEc
Q 025144 57 WKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKN------QLSMASSRQDLVSKACYKNIEWVEG 130 (257)
Q Consensus 57 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~------~~~~a~~~~~~~~~~~~~~~~~~~~ 130 (257)
....+...+...++.+|||||||+|..+..+++..++..+++++|+|+. +++.++++++..+.. +++.++.+
T Consensus 31 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~--~~v~~~~~ 108 (275)
T 3bkx_A 31 HRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLG--DRLTVHFN 108 (275)
T ss_dssp HHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTG--GGEEEECS
T ss_pred HHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCC--CceEEEEC
Confidence 3445556667788899999999999999999998756689999999997 999999988654332 47999999
Q ss_pred c---CCCCCCCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeecCCCchhH--HHHHHHHHhhhhhhhhcc
Q 025144 131 D---ALDLPFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFT--TAIQEWMIDNVVVPVASG 205 (257)
Q Consensus 131 d---~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 205 (257)
| ...+++++++||+|++..+++|++++..+++.+.++++|||.+++.++..+..... ................ .
T Consensus 109 d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 187 (275)
T 3bkx_A 109 TNLSDDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIA-P 187 (275)
T ss_dssp CCTTTCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHS-C
T ss_pred ChhhhccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhcc-c
Confidence 8 33445667899999999999999998888877777778899999998776543221 1111111110000000 0
Q ss_pred CCchhhhhhhHHHHhccCCHHHHHHHHHHcCceeeEEeee
Q 025144 206 YGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYEL 245 (257)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 245 (257)
.. ......+++.+++.++++++||++++...+
T Consensus 188 ~~--------~~~~~~~~s~~~l~~~l~~aGf~~~~~~~~ 219 (275)
T 3bkx_A 188 SD--------VANIRTLITPDTLAQIAHDNTWTYTAGTIV 219 (275)
T ss_dssp CT--------TCSCCCCCCHHHHHHHHHHHTCEEEECCCB
T ss_pred cc--------cccccccCCHHHHHHHHHHCCCeeEEEEEe
Confidence 00 001123679999999999999999987765
No 49
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.87 E-value=1.1e-20 Score=154.98 Aligned_cols=164 Identities=18% Similarity=0.073 Sum_probs=125.1
Q ss_pred CCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEE
Q 025144 66 GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAI 145 (257)
Q Consensus 66 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v 145 (257)
...+..+|||+|||+|..+..+++.+ |+.+++++|+ +.+++.+++++...+.. .++++..+|+.+ +.+. +||+|
T Consensus 166 ~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~-~~p~-~~D~v 239 (332)
T 3i53_A 166 DWAALGHVVDVGGGSGGLLSALLTAH-EDLSGTVLDL-QGPASAAHRRFLDTGLS--GRAQVVVGSFFD-PLPA-GAGGY 239 (332)
T ss_dssp CCGGGSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCT--TTEEEEECCTTS-CCCC-SCSEE
T ss_pred CCCCCCEEEEeCCChhHHHHHHHHHC-CCCeEEEecC-HHHHHHHHHhhhhcCcC--cCeEEecCCCCC-CCCC-CCcEE
Confidence 34456799999999999999999985 7789999999 99999999987654432 589999999973 4444 79999
Q ss_pred EecccccCcccH--HHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHHHHhccC
Q 025144 146 TMGYGLRNVVDK--RKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFL 223 (257)
Q Consensus 146 ~~~~~l~~~~~~--~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (257)
++.+++|++++. .+++++++++|+|||.+++.+...+.... ........ +.....+.+
T Consensus 240 ~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~-~~~~d~~~-------------------~~~~~~~~~ 299 (332)
T 3i53_A 240 VLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHA-GTGMDLRM-------------------LTYFGGKER 299 (332)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---C-CHHHHHHH-------------------HHHHSCCCC
T ss_pred EEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCc-cHHHHHHH-------------------HhhCCCCCC
Confidence 999999999874 88999999999999999999876654311 00111000 001112356
Q ss_pred CHHHHHHHHHHcCceeeEEeeecCceeEEEeeeC
Q 025144 224 TGKDLEKLALEIGFSRAKHYELSGGLMGNLVATR 257 (257)
Q Consensus 224 ~~~~~~~~l~~~Gf~~~~~~~~~~g~~~~~~~~k 257 (257)
+.++|.++|+++||++++.+.... ..++.+++
T Consensus 300 t~~e~~~ll~~aGf~~~~~~~~~~--~~vie~r~ 331 (332)
T 3i53_A 300 SLAELGELAAQAGLAVRAAHPISY--VSIVEMTA 331 (332)
T ss_dssp CHHHHHHHHHHTTEEEEEEEECSS--SEEEEEEE
T ss_pred CHHHHHHHHHHCCCEEEEEEECCC--cEEEEEee
Confidence 899999999999999999987754 66666653
No 50
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.87 E-value=6.3e-21 Score=157.67 Aligned_cols=174 Identities=17% Similarity=0.185 Sum_probs=128.7
Q ss_pred HhhhCCCC-CCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-CCC
Q 025144 62 VSWSGAKT-GDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-FSD 139 (257)
Q Consensus 62 ~~~~~~~~-~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~ 139 (257)
...+...+ +.+|||||||+|..+..+++.+ |+.+++++|+ +.+++.++++....+.. .++.++.+|+.+.+ +.+
T Consensus 171 l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~~~ 246 (352)
T 3mcz_A 171 VSELGVFARARTVIDLAGGHGTYLAQVLRRH-PQLTGQIWDL-PTTRDAARKTIHAHDLG--GRVEFFEKNLLDARNFEG 246 (352)
T ss_dssp HHTCGGGTTCCEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTCG--GGEEEEECCTTCGGGGTT
T ss_pred HHhCCCcCCCCEEEEeCCCcCHHHHHHHHhC-CCCeEEEEEC-HHHHHHHHHHHHhcCCC--CceEEEeCCcccCcccCC
Confidence 33344445 7899999999999999999985 6789999999 88999999887654432 57999999998865 134
Q ss_pred CcccEEEecccccCcccH--HHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHH
Q 025144 140 CFFDAITMGYGLRNVVDK--RKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKS 217 (257)
Q Consensus 140 ~~~D~v~~~~~l~~~~~~--~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (257)
+.||+|++.+++|++++. ..++++++++|+|||.+++.+...+..........++...+....
T Consensus 247 ~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~--------------- 311 (352)
T 3mcz_A 247 GAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNT--------------- 311 (352)
T ss_dssp CCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHS---------------
T ss_pred CCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhC---------------
Confidence 669999999999999764 889999999999999999998776553221111111111110000
Q ss_pred HHhccCCHHHHHHHHHHcCceeeEEeeecCceeEEEeeeC
Q 025144 218 SIREFLTGKDLEKLALEIGFSRAKHYELSGGLMGNLVATR 257 (257)
Q Consensus 218 ~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~g~~~~~~~~k 257 (257)
.....++.++|+++|+++||++++.. .|.+.+++++|
T Consensus 312 ~~~~~~t~~e~~~ll~~aGf~~~~~~---~g~~~l~~a~k 348 (352)
T 3mcz_A 312 NHGELHPTPWIAGVVRDAGLAVGERS---IGRYTLLIGQR 348 (352)
T ss_dssp TTCCCCCHHHHHHHHHHTTCEEEEEE---ETTEEEEEEEC
T ss_pred CCCCcCCHHHHHHHHHHCCCceeeec---cCceEEEEEec
Confidence 01135689999999999999998842 35577888876
No 51
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.87 E-value=2.5e-20 Score=154.47 Aligned_cols=177 Identities=12% Similarity=0.155 Sum_probs=132.1
Q ss_pred HHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCC
Q 025144 59 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFS 138 (257)
Q Consensus 59 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 138 (257)
+.+...+...++.+|||||||+|..+..+++.+ |+.+++++|+ +.+++.++++++..+.. .++.++.+|+.+.+++
T Consensus 180 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~ 255 (359)
T 1x19_A 180 QLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHF-PELDSTILNL-PGAIDLVNENAAEKGVA--DRMRGIAVDIYKESYP 255 (359)
T ss_dssp HHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTCT--TTEEEEECCTTTSCCC
T ss_pred HHHHHhcCCCCCCEEEEECCcccHHHHHHHHHC-CCCeEEEEec-HHHHHHHHHHHHhcCCC--CCEEEEeCccccCCCC
Confidence 344555566778899999999999999999985 6789999999 99999999987654322 4699999999987655
Q ss_pred CCcccEEEecccccCccc--HHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhH
Q 025144 139 DCFFDAITMGYGLRNVVD--KRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLK 216 (257)
Q Consensus 139 ~~~~D~v~~~~~l~~~~~--~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (257)
+ +|+|++.+++|++++ ...++++++++|||||.+++.+...+.... .....++ .+....... .
T Consensus 256 ~--~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~-~~~~~~~--~~~~~~~~g--~-------- 320 (359)
T 1x19_A 256 E--ADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPEN-PNFDYLS--HYILGAGMP--F-------- 320 (359)
T ss_dssp C--CSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTS-CCHHHHH--HHGGGGGSS--C--------
T ss_pred C--CCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCC-chHHHHH--HHHHhcCCC--C--------
Confidence 3 399999999999986 788999999999999999998877654311 1111111 111100000 0
Q ss_pred HHHhccCCHHHHHHHHHHcCceeeEEeeecCceeEEEeeeC
Q 025144 217 SSIREFLTGKDLEKLALEIGFSRAKHYELSGGLMGNLVATR 257 (257)
Q Consensus 217 ~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~g~~~~~~~~k 257 (257)
....+++.++|.++++++||++++..... ...+++++|
T Consensus 321 -~~~~~~t~~e~~~ll~~aGf~~v~~~~~~--~~~vi~a~k 358 (359)
T 1x19_A 321 -SVLGFKEQARYKEILESLGYKDVTMVRKY--DHLLVQAVK 358 (359)
T ss_dssp -CCCCCCCGGGHHHHHHHHTCEEEEEEEET--TEEEEEEEC
T ss_pred -cccCCCCHHHHHHHHHHCCCceEEEEecC--CceEEEEeC
Confidence 01124799999999999999999988875 566777776
No 52
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.87 E-value=6.8e-21 Score=153.80 Aligned_cols=214 Identities=16% Similarity=0.188 Sum_probs=122.5
Q ss_pred CCchhHHHHhhhhhhhhhhhhhhh---hhhhHHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeC
Q 025144 26 RCSSERQELFSRIAPVYDNLNDLL---SFGQHRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDF 102 (257)
Q Consensus 26 ~~~~~~~~~y~~~a~~y~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~ 102 (257)
...+.+.++|+..+..|....... .......|....+......++.+|||+|||+|..+..+++. +..+++++|+
T Consensus 18 ~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~ 95 (298)
T 1ri5_A 18 GKKEEIREHYNSIRERGRESRQRSKTINIRNANNFIKACLIRLYTKRGDSVLDLGCGKGGDLLKYERA--GIGEYYGVDI 95 (298)
T ss_dssp -----------------------CCSHHHHHHHHHHHHHHHHHHCCTTCEEEEETCTTTTTHHHHHHH--TCSEEEEEES
T ss_pred hhHHHHHHHHHHhhcccccccccchhhhHHHHHHHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHC--CCCEEEEEEC
Confidence 345678888998877665442221 11112222222222223467789999999999999998876 3459999999
Q ss_pred ChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCC-CCCcccEEEecccccC----cccHHHHHHHHHhcccCCCEEEEE
Q 025144 103 SKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF-SDCFFDAITMGYGLRN----VVDKRKALEESFRVLKPGSRISVL 177 (257)
Q Consensus 103 s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~D~v~~~~~l~~----~~~~~~~l~~~~~~Lk~gG~l~~~ 177 (257)
|+.+++.++++....+.. .++.++++|+.+.++ ++++||+|++..++++ .+++..+++++.++|||||.+++.
T Consensus 96 s~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 173 (298)
T 1ri5_A 96 AEVSINDARVRARNMKRR--FKVFFRAQDSYGRHMDLGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT 173 (298)
T ss_dssp CHHHHHHHHHHHHTSCCS--SEEEEEESCTTTSCCCCSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHhcCCC--ccEEEEECCccccccCCCCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 999999999987654321 468999999998876 5789999999999977 457889999999999999999988
Q ss_pred eecCCCchhHHHHHHHHHhhhhhhhh--c--cCC--chhhhhh-hH----HHHhccCCHHHHHHHHHHcCceeeEEeee
Q 025144 178 DFNKSTQPFTTAIQEWMIDNVVVPVA--S--GYG--LAEEYQY-LK----SSIREFLTGKDLEKLALEIGFSRAKHYEL 245 (257)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~--~~~~~~~-~~----~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 245 (257)
.++... ....+............. . ... ....|.. +. ....++++.+++.++|+++||++++...+
T Consensus 174 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~l~~ll~~aGf~~v~~~~~ 250 (298)
T 1ri5_A 174 VPSRDV--ILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVNNCIEYFVDFTRMVDGFKRLGLSLVERKGF 250 (298)
T ss_dssp EECHHH--HHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCSSEEEECCCHHHHHHHHHTTTEEEEEEEEH
T ss_pred ECCHHH--HHHHHccCccCCeeEEEEeCccccccccccceEEEEEchhhcCCcccccCHHHHHHHHHHcCCEEEEecCH
Confidence 755311 111000000000000000 0 000 0000100 00 01124678999999999999999987765
No 53
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.87 E-value=1e-20 Score=146.17 Aligned_cols=178 Identities=22% Similarity=0.270 Sum_probs=127.6
Q ss_pred hHHHHhhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHH
Q 025144 30 ERQELFSRIAPVYDNLNDLLSFGQHRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSM 109 (257)
Q Consensus 30 ~~~~~y~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~ 109 (257)
..-..|+..++.|+.+....... .......+.... ++.+|||+|||+|..+..+++ . +++|+|+.+++.
T Consensus 12 ~~~~~~~~~~~~y~~~~~~~~~~-~~~~~~~l~~~~---~~~~vLDiG~G~G~~~~~l~~----~---~~vD~s~~~~~~ 80 (219)
T 1vlm_A 12 HMWHIFERFVNEYERWFLVHRFA-YLSELQAVKCLL---PEGRGVEIGVGTGRFAVPLKI----K---IGVEPSERMAEI 80 (219)
T ss_dssp CTTHHHHHTHHHHHHHHHHTHHH-HHHHHHHHHHHC---CSSCEEEETCTTSTTHHHHTC----C---EEEESCHHHHHH
T ss_pred hheeecchhHHHHHHHHHhcchh-HHHHHHHHHHhC---CCCcEEEeCCCCCHHHHHHHH----H---hccCCCHHHHHH
Confidence 44567777788887775432211 111222232332 377999999999999987752 1 999999999999
Q ss_pred HHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeecCCCchhHHH
Q 025144 110 ASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTA 189 (257)
Q Consensus 110 a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~ 189 (257)
++++ ++.++++|+.++++++++||+|++..++++++++..+++++.++|+|||.+++.+++.... ...
T Consensus 81 a~~~----------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~-~~~- 148 (219)
T 1vlm_A 81 ARKR----------GVFVLKGTAENLPLKDESFDFALMVTTICFVDDPERALKEAYRILKKGGYLIVGIVDRESF-LGR- 148 (219)
T ss_dssp HHHT----------TCEEEECBTTBCCSCTTCEEEEEEESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEECSSSH-HHH-
T ss_pred HHhc----------CCEEEEcccccCCCCCCCeeEEEEcchHhhccCHHHHHHHHHHHcCCCcEEEEEEeCCccH-HHH-
Confidence 8875 5788999998888777899999999999999999999999999999999999988765332 111
Q ss_pred HHHHHHhhhhhhhhccCCchhhhhhhHHHHhccCCHHHHHHHHHHcCceeeEEeeec
Q 025144 190 IQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYELS 246 (257)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 246 (257)
+.... ..... . + ...++++.+++.++|+++||++++.....
T Consensus 149 ---~~~~~---~~~~~--~---~-----~~~~~~~~~~l~~~l~~~Gf~~~~~~~~~ 189 (219)
T 1vlm_A 149 ---EYEKN---KEKSV--F---Y-----KNARFFSTEELMDLMRKAGFEEFKVVQTL 189 (219)
T ss_dssp ---HHHHT---TTC-C--C---S-----TTCCCCCHHHHHHHHHHTTCEEEEEEEEC
T ss_pred ---HHHHH---hcCcc--h---h-----cccccCCHHHHHHHHHHCCCeEEEEeccc
Confidence 11100 00000 0 0 01246799999999999999999877653
No 54
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.86 E-value=3.2e-21 Score=151.06 Aligned_cols=144 Identities=19% Similarity=0.270 Sum_probs=113.7
Q ss_pred CCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC--CCCCCccc
Q 025144 66 GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL--PFSDCFFD 143 (257)
Q Consensus 66 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~D 143 (257)
...++.+|||||||+|.++..+++. +.+++++|+|+.+++.++++ +.++.+|..+. ++++++||
T Consensus 38 ~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~-----------~~~~~~d~~~~~~~~~~~~fD 103 (240)
T 3dli_A 38 YFKGCRRVLDIGCGRGEFLELCKEE---GIESIGVDINEDMIKFCEGK-----------FNVVKSDAIEYLKSLPDKYLD 103 (240)
T ss_dssp GTTTCSCEEEETCTTTHHHHHHHHH---TCCEEEECSCHHHHHHHHTT-----------SEEECSCHHHHHHTSCTTCBS
T ss_pred hhcCCCeEEEEeCCCCHHHHHHHhC---CCcEEEEECCHHHHHHHHhh-----------cceeeccHHHHhhhcCCCCee
Confidence 3466789999999999999999887 46899999999999998754 67788888764 66788999
Q ss_pred EEEecccccCcc--cHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHHHHhc
Q 025144 144 AITMGYGLRNVV--DKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIRE 221 (257)
Q Consensus 144 ~v~~~~~l~~~~--~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (257)
+|++..+++|++ +...++++++++|||||.+++..++...... ...++. . .....
T Consensus 104 ~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~---~~~~~~----~----------------~~~~~ 160 (240)
T 3dli_A 104 GVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYS---LINFYI----D----------------PTHKK 160 (240)
T ss_dssp EEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHH---HHHHTT----S----------------TTCCS
T ss_pred EEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHH---HHHHhc----C----------------ccccc
Confidence 999999999998 4599999999999999999998776433211 111110 0 01124
Q ss_pred cCCHHHHHHHHHHcCceeeEEeeec
Q 025144 222 FLTGKDLEKLALEIGFSRAKHYELS 246 (257)
Q Consensus 222 ~~~~~~~~~~l~~~Gf~~~~~~~~~ 246 (257)
.++.+++.++++++||++++...+.
T Consensus 161 ~~~~~~l~~~l~~aGf~~~~~~~~~ 185 (240)
T 3dli_A 161 PVHPETLKFILEYLGFRDVKIEFFE 185 (240)
T ss_dssp CCCHHHHHHHHHHHTCEEEEEEEEC
T ss_pred cCCHHHHHHHHHHCCCeEEEEEEec
Confidence 6688999999999999998877664
No 55
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.86 E-value=2.1e-21 Score=151.34 Aligned_cols=173 Identities=23% Similarity=0.321 Sum_probs=122.5
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhc--cCCCeeEEEccCCCCCCCCCcccEE
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKA--CYKNIEWVEGDALDLPFSDCFFDAI 145 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~D~v 145 (257)
+++.+|||+|||+|..+..+++. +.+++++|+|+.+++.++++....+.. ...++.+..+|+.++++++++||+|
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v 105 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFA 105 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEE
Confidence 46789999999999999999887 569999999999999999987653321 0126899999999988888999999
Q ss_pred EecccccCcccHH---HHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhh-hhhhhccCCchhhhhhhHHHHhc
Q 025144 146 TMGYGLRNVVDKR---KALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNV-VVPVASGYGLAEEYQYLKSSIRE 221 (257)
Q Consensus 146 ~~~~~l~~~~~~~---~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 221 (257)
++..++++++++. .++++++++|||||.+++.++........ ......... .....+.+..............+
T Consensus 106 ~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (235)
T 3sm3_A 106 VMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKL--YRKRYLHDFPITKEEGSFLARDPETGETEFIAH 183 (235)
T ss_dssp EEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHH--HHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEE
T ss_pred EEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHH--HHHHhhhhccchhhhcceEecccccCCcceeeE
Confidence 9999999998877 89999999999999999998776433221 111111000 00000000000000000001124
Q ss_pred cCCHHHHHHHHHHcCceeeEEeee
Q 025144 222 FLTGKDLEKLALEIGFSRAKHYEL 245 (257)
Q Consensus 222 ~~~~~~~~~~l~~~Gf~~~~~~~~ 245 (257)
.++.+++.++|+++||+++++...
T Consensus 184 ~~~~~~l~~ll~~aGf~~~~~~~~ 207 (235)
T 3sm3_A 184 HFTEKELVFLLTDCRFEIDYFRVK 207 (235)
T ss_dssp CBCHHHHHHHHHTTTEEEEEEEEE
T ss_pred eCCHHHHHHHHHHcCCEEEEEEec
Confidence 679999999999999999987654
No 56
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.86 E-value=2.2e-21 Score=151.46 Aligned_cols=141 Identities=19% Similarity=0.215 Sum_probs=115.0
Q ss_pred CCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEecc
Q 025144 70 GDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGY 149 (257)
Q Consensus 70 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 149 (257)
+.+|||+|||+|..+..+++ ++.+|+++|+|+.+++.++++....+.. .++.++++|+.+++ ++++||+|++..
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~-~~~~fD~v~~~~ 140 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMAS---PERFVVGLDISESALAKANETYGSSPKA--EYFSFVKEDVFTWR-PTELFDLIFDYV 140 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCB---TTEEEEEECSCHHHHHHHHHHHTTSGGG--GGEEEECCCTTTCC-CSSCEEEEEEES
T ss_pred CCCEEEeCCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHHHhhccCCC--cceEEEECchhcCC-CCCCeeEEEECh
Confidence 34999999999999998875 4679999999999999999988653322 57999999999876 456899999999
Q ss_pred cccCcc--cHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHHHHhccCCHHH
Q 025144 150 GLRNVV--DKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKD 227 (257)
Q Consensus 150 ~l~~~~--~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (257)
++++++ +...+++++.++|||||.+++.++........ . ...++.++
T Consensus 141 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~----------------------~---------~~~~~~~~ 189 (235)
T 3lcc_A 141 FFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGG----------------------P---------PYKVDVST 189 (235)
T ss_dssp STTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSC----------------------S---------SCCCCHHH
T ss_pred hhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCC----------------------C---------CccCCHHH
Confidence 999998 88999999999999999999887654321100 0 01357899
Q ss_pred HHHHHHHcCceeeEEeeecC
Q 025144 228 LEKLALEIGFSRAKHYELSG 247 (257)
Q Consensus 228 ~~~~l~~~Gf~~~~~~~~~~ 247 (257)
+.++|+++||++++......
T Consensus 190 ~~~~l~~~Gf~~~~~~~~~~ 209 (235)
T 3lcc_A 190 FEEVLVPIGFKAVSVEENPH 209 (235)
T ss_dssp HHHHHGGGTEEEEEEEECTT
T ss_pred HHHHHHHcCCeEEEEEecCC
Confidence 99999999999998877643
No 57
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.86 E-value=1.4e-20 Score=147.56 Aligned_cols=132 Identities=23% Similarity=0.412 Sum_probs=103.9
Q ss_pred HhhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhh
Q 025144 34 LFSRIAPVYDNLNDLLSFGQHRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSR 113 (257)
Q Consensus 34 ~y~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~ 113 (257)
.|++.+..|+...... ....+.+.+...+ .++.+|||+|||+|..+..+++. .+++++|+|+.+++.++++
T Consensus 3 ~y~~~a~~yd~~~~~~---~~~~~~~~~~~~~--~~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~ 73 (243)
T 3d2l_A 3 AYEQFAYVYDELMQDV---PYPEWVAWVLEQV--EPGKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEK 73 (243)
T ss_dssp ---CTTHHHHHHTTTC---CHHHHHHHHHHHS--CTTCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHH
T ss_pred hHHHHHHHHHHhhhcc---cHHHHHHHHHHHc--CCCCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHh
Confidence 5888899998865422 2344555555554 34679999999999999988754 6999999999999999998
Q ss_pred hhhhhhccCCCeeEEEccCCCCCCCCCcccEEEecc-cccCc---ccHHHHHHHHHhcccCCCEEEEEee
Q 025144 114 QDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGY-GLRNV---VDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 114 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~-~l~~~---~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
....+ .++.+.++|+.+.+++ ++||+|++.. +++|+ ++...++++++++|+|||.+++...
T Consensus 74 ~~~~~----~~~~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 138 (243)
T 3d2l_A 74 AMETN----RHVDFWVQDMRELELP-EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVH 138 (243)
T ss_dssp HHHTT----CCCEEEECCGGGCCCS-SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhcC----CceEEEEcChhhcCCC-CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcC
Confidence 76443 5799999999887765 7899999986 88888 4678899999999999999987543
No 58
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.86 E-value=5.5e-21 Score=154.03 Aligned_cols=155 Identities=15% Similarity=0.173 Sum_probs=106.8
Q ss_pred CCCCeEEEecCCCChhHHHHHHHh---CCCce--EEEEeCChhHHHHHHhhhhhhhhccCCCee--EEEccCCCCC----
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQV---GSQGK--VIGLDFSKNQLSMASSRQDLVSKACYKNIE--WVEGDALDLP---- 136 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~---~~~~~--v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~--~~~~d~~~~~---- 136 (257)
.++.+|||||||+|..+..+++.+ .+... ++++|+|++|++.++++...... ..++. +..++..+++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~ 128 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSN--LENVKFAWHKETSSEYQSRML 128 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSS--CTTEEEEEECSCHHHHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccC--CCcceEEEEecchhhhhhhhc
Confidence 456799999999998765443321 24554 49999999999999988753211 13444 4455554432
Q ss_pred --CCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhh
Q 025144 137 --FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQY 214 (257)
Q Consensus 137 --~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (257)
+++++||+|++.+++||++|+...|++++++|||||.+++....... .+...+..+. ... ...
T Consensus 129 ~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~-~~~~~~~~~~-~~~--------~~~----- 193 (292)
T 2aot_A 129 EKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSGSS-GWDKLWKKYG-SRF--------PQD----- 193 (292)
T ss_dssp TTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECTTS-HHHHHHHHHG-GGS--------CCC-----
T ss_pred cccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecCCc-cHHHHHHHHH-Hhc--------cCC-----
Confidence 45789999999999999999999999999999999999988655322 2111111111 000 000
Q ss_pred hHHHHhccCCHHHHHHHHHHcCceeeEE
Q 025144 215 LKSSIREFLTGKDLEKLALEIGFSRAKH 242 (257)
Q Consensus 215 ~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 242 (257)
....+++.+++.++|+++||+++..
T Consensus 194 ---~~~~~~~~~~~~~~l~~aGf~~~~~ 218 (292)
T 2aot_A 194 ---DLCQYITSDDLTQMLDNLGLKYECY 218 (292)
T ss_dssp ---TTCCCCCHHHHHHHHHHHTCCEEEE
T ss_pred ---CcccCCCHHHHHHHHHHCCCceEEE
Confidence 0124678999999999999987763
No 59
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.86 E-value=1.9e-21 Score=148.51 Aligned_cols=148 Identities=14% Similarity=0.056 Sum_probs=111.2
Q ss_pred hhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhh---------ccCCCeeEEEccCCC
Q 025144 64 WSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSK---------ACYKNIEWVEGDALD 134 (257)
Q Consensus 64 ~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~---------~~~~~~~~~~~d~~~ 134 (257)
.+.+.++.+|||+|||+|..+..+++. +.+|+|+|+|+.|++.|+++...... ....++.++++|+.+
T Consensus 17 ~l~~~~~~~vLD~GCG~G~~~~~la~~---g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~ 93 (203)
T 1pjz_A 17 SLNVVPGARVLVPLCGKSQDMSWLSGQ---GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFA 93 (203)
T ss_dssp HHCCCTTCEEEETTTCCSHHHHHHHHH---CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSS
T ss_pred hcccCCCCEEEEeCCCCcHhHHHHHHC---CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECcccc
Confidence 345667889999999999999999987 56999999999999999987532100 001589999999999
Q ss_pred CCCCC-CcccEEEecccccCcc--cHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhh
Q 025144 135 LPFSD-CFFDAITMGYGLRNVV--DKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEE 211 (257)
Q Consensus 135 ~~~~~-~~~D~v~~~~~l~~~~--~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (257)
+++++ ++||+|++..++++++ +...++++++++|||||.+++.....+... . .+ .
T Consensus 94 l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~---------------~-~~-----~- 151 (203)
T 1pjz_A 94 LTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQAL---------------L-EG-----P- 151 (203)
T ss_dssp STHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSS---------------S-SS-----C-
T ss_pred CCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCccc---------------c-CC-----C-
Confidence 87654 7899999999999886 356789999999999999555554432110 0 00 0
Q ss_pred hhhhHHHHhccCCHHHHHHHHHHcCceeeEEeee
Q 025144 212 YQYLKSSIREFLTGKDLEKLALEIGFSRAKHYEL 245 (257)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 245 (257)
...++.+++.+++++ ||++......
T Consensus 152 --------~~~~~~~el~~~~~~-gf~i~~~~~~ 176 (203)
T 1pjz_A 152 --------PFSVPQTWLHRVMSG-NWEVTKVGGQ 176 (203)
T ss_dssp --------CCCCCHHHHHHTSCS-SEEEEEEEES
T ss_pred --------CCCCCHHHHHHHhcC-CcEEEEeccc
Confidence 012478999999988 9998766543
No 60
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.85 E-value=5.5e-20 Score=151.73 Aligned_cols=168 Identities=20% Similarity=0.175 Sum_probs=122.1
Q ss_pred HHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCC
Q 025144 60 MAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSD 139 (257)
Q Consensus 60 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 139 (257)
.+...+...++.+|||||||+|..+..+++.+ |+.+++++|+ +.++. +++.+..+.. .++.++.+|+.+ +.+
T Consensus 175 ~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~--~~~~~~~~~~--~~v~~~~~d~~~-~~p- 246 (348)
T 3lst_A 175 ILARAGDFPATGTVADVGGGRGGFLLTVLREH-PGLQGVLLDR-AEVVA--RHRLDAPDVA--GRWKVVEGDFLR-EVP- 246 (348)
T ss_dssp HHHHHSCCCSSEEEEEETCTTSHHHHHHHHHC-TTEEEEEEEC-HHHHT--TCCCCCGGGT--TSEEEEECCTTT-CCC-
T ss_pred HHHHhCCccCCceEEEECCccCHHHHHHHHHC-CCCEEEEecC-HHHhh--cccccccCCC--CCeEEEecCCCC-CCC-
Confidence 44455566778899999999999999999985 6789999999 44544 3333222222 589999999973 444
Q ss_pred CcccEEEecccccCcccH--HHHHHHHHhcccCCCEEEEEeecCCCchh--HHHHHHHHHhhhhhhhhccCCchhhhhhh
Q 025144 140 CFFDAITMGYGLRNVVDK--RKALEESFRVLKPGSRISVLDFNKSTQPF--TTAIQEWMIDNVVVPVASGYGLAEEYQYL 215 (257)
Q Consensus 140 ~~~D~v~~~~~l~~~~~~--~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (257)
+||+|++.+++|++++. ..+|++++++|||||.+++.+...+.... ......... ...
T Consensus 247 -~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~---~~~-------------- 308 (348)
T 3lst_A 247 -HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMM---LAA-------------- 308 (348)
T ss_dssp -CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHH---HHT--------------
T ss_pred -CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhh---hhc--------------
Confidence 79999999999999876 69999999999999999998876544321 111111110 000
Q ss_pred HHHHhccCCHHHHHHHHHHcCceeeEEeeecCceeEEEeee
Q 025144 216 KSSIREFLTGKDLEKLALEIGFSRAKHYELSGGLMGNLVAT 256 (257)
Q Consensus 216 ~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~g~~~~~~~~ 256 (257)
.....++.++|.++++++||++++++. ..+...++.++
T Consensus 309 --~~~~~~t~~e~~~ll~~aGf~~~~~~~-~~~~~~vie~~ 346 (348)
T 3lst_A 309 --RTGQERTAAELEPLFTAAGLRLDRVVG-TSSVMSIAVGV 346 (348)
T ss_dssp --TSCCCCBHHHHHHHHHHTTEEEEEEEE-CSSSCEEEEEE
T ss_pred --CCCcCCCHHHHHHHHHHCCCceEEEEE-CCCCcEEEEEE
Confidence 001356899999999999999999888 55566666654
No 61
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.85 E-value=1.9e-20 Score=144.47 Aligned_cols=120 Identities=18% Similarity=0.181 Sum_probs=96.5
Q ss_pred HHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhc--cCCCeeEEEccCCCC
Q 025144 58 KRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKA--CYKNIEWVEGDALDL 135 (257)
Q Consensus 58 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~--~~~~~~~~~~d~~~~ 135 (257)
.+.+...+...++.+|||+|||+|.++..+++.. +..+++++|+|+.+++.+++++...+.. ...++.++++|+...
T Consensus 18 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 96 (217)
T 3jwh_A 18 MNGVVAALKQSNARRVIDLGCGQGNLLKILLKDS-FFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQ 96 (217)
T ss_dssp HHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCT-TCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSC
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhC-CCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccc
Confidence 3444444555677899999999999999999873 5579999999999999999987543211 013799999999877
Q ss_pred CCCCCcccEEEecccccCcccH--HHHHHHHHhcccCCCEEEEEe
Q 025144 136 PFSDCFFDAITMGYGLRNVVDK--RKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 136 ~~~~~~~D~v~~~~~l~~~~~~--~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
+.+.++||+|++..+++++++. ..+++++.++|||||.+++..
T Consensus 97 ~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 97 DKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp CGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred cccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 6666899999999999999855 899999999999999765543
No 62
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.85 E-value=1.1e-20 Score=152.76 Aligned_cols=208 Identities=16% Similarity=0.175 Sum_probs=125.0
Q ss_pred HHHHhhhhh-hhhhhhhhhhhhhhHHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHH
Q 025144 31 RQELFSRIA-PVYDNLNDLLSFGQHRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSM 109 (257)
Q Consensus 31 ~~~~y~~~a-~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~ 109 (257)
..++|+..+ ..|+...... ......+.+...+...++ +|||||||+|.++..+++. +.+|+++|+|+.+++.
T Consensus 47 ~~~~y~~~~~~~y~~~~~~~---~~~~~~~~~~~~~~~~~~-~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~ 119 (299)
T 3g2m_A 47 LCDFYDEGAADTYRDLIQDA---DGTSEAREFATRTGPVSG-PVLELAAGMGRLTFPFLDL---GWEVTALELSTSVLAA 119 (299)
T ss_dssp EEECC--------------C---CCHHHHHHHHHHHCCCCS-CEEEETCTTTTTHHHHHTT---TCCEEEEESCHHHHHH
T ss_pred HHHHHhHHHHHHHHHHhccc---CccHHHHHHHHhhCCCCC-cEEEEeccCCHHHHHHHHc---CCeEEEEECCHHHHHH
Confidence 445666655 5666654321 122333444455544444 9999999999999999876 5789999999999999
Q ss_pred HHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEec-ccccCcc--cHHHHHHHHHhcccCCCEEEEEeecCCCchh
Q 025144 110 ASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMG-YGLRNVV--DKRKALEESFRVLKPGSRISVLDFNKSTQPF 186 (257)
Q Consensus 110 a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~-~~l~~~~--~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~ 186 (257)
++++....+.....++.++++|+.++++ +++||+|++. .++++++ +...++++++++|||||.+++..++......
T Consensus 120 a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~ 198 (299)
T 3g2m_A 120 FRKRLAEAPADVRDRCTLVQGDMSAFAL-DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAAES 198 (299)
T ss_dssp HHHHHHTSCHHHHTTEEEEECBTTBCCC-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHS
T ss_pred HHHHHhhcccccccceEEEeCchhcCCc-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccccc
Confidence 9998765431111479999999999876 6889999865 5566665 4689999999999999999998766532100
Q ss_pred H--HHHHHHHH-hhhhhhhhc-------c--CCc----hhhhh-hhHHHHhccCCHHHHHHHHHHcCceeeEEeeec
Q 025144 187 T--TAIQEWMI-DNVVVPVAS-------G--YGL----AEEYQ-YLKSSIREFLTGKDLEKLALEIGFSRAKHYELS 246 (257)
Q Consensus 187 ~--~~~~~~~~-~~~~~~~~~-------~--~~~----~~~~~-~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 246 (257)
. .....+.. ......... . ... ..... .......++++.+++.++|+++||++++...+.
T Consensus 199 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~ 275 (299)
T 3g2m_A 199 EPLERKQELPGRSGRRYVLHVRHLPAEEIQEITIHPADETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFA 275 (299)
T ss_dssp CCCCC-------------CCEEEEEEEEEEEEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEEC
T ss_pred cchhccceeecCCCcEEEEEEEEeccccEEEEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecC
Confidence 0 00000000 000000000 0 000 00000 000011246799999999999999999998875
No 63
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.85 E-value=1.2e-20 Score=149.69 Aligned_cols=153 Identities=18% Similarity=0.174 Sum_probs=108.9
Q ss_pred CCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhc-------------------------
Q 025144 66 GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKA------------------------- 120 (257)
Q Consensus 66 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~------------------------- 120 (257)
+..++.+|||||||+|.++..++.. ...+|+++|+|+.|++.|+++++.....
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~--~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~ 129 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACD--SFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEE 129 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGG--TEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHh--hhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHH
Confidence 4556789999999999887766544 1237999999999999998865432100
Q ss_pred -cCCCee-EEEccCCCC-CC---CCCcccEEEecccccCc----ccHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHH
Q 025144 121 -CYKNIE-WVEGDALDL-PF---SDCFFDAITMGYGLRNV----VDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAI 190 (257)
Q Consensus 121 -~~~~~~-~~~~d~~~~-~~---~~~~~D~v~~~~~l~~~----~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~ 190 (257)
...++. ++++|+.+. ++ ..++||+|++++++|++ ++...++++++++|||||.+++.+........
T Consensus 130 ~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~---- 205 (263)
T 2a14_A 130 KLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYM---- 205 (263)
T ss_dssp HHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEE----
T ss_pred HHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccce----
Confidence 001243 889999873 32 25689999999999985 46678999999999999999998754322100
Q ss_pred HHHHHhhhhhhhhccCCchhhhhhhHHHHhccCCHHHHHHHHHHcCceeeEEeeec
Q 025144 191 QEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYELS 246 (257)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 246 (257)
. +. ..+ ....++.+++.++|+++||++++.....
T Consensus 206 ----~-----------g~-~~~------~~~~~~~~~l~~~l~~aGF~i~~~~~~~ 239 (263)
T 2a14_A 206 ----V-----------GK-REF------SCVALEKGEVEQAVLDAGFDIEQLLHSP 239 (263)
T ss_dssp ----E-----------TT-EEE------ECCCCCHHHHHHHHHHTTEEEEEEEEEC
T ss_pred ----e-----------CC-eEe------eccccCHHHHHHHHHHCCCEEEEEeecc
Confidence 0 00 000 0124588999999999999999887753
No 64
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.85 E-value=1.5e-19 Score=150.03 Aligned_cols=157 Identities=17% Similarity=0.189 Sum_probs=117.5
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEE
Q 025144 67 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAIT 146 (257)
Q Consensus 67 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 146 (257)
..+..+|||||||+|..+..+++.+ |+.+++++|+ +.+++.+++. ++++++.+|+.+ +++++ |+|+
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~---------~~v~~~~~d~~~-~~p~~--D~v~ 266 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKY-PSINAINFDL-PHVIQDAPAF---------SGVEHLGGDMFD-GVPKG--DAIF 266 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCC---------TTEEEEECCTTT-CCCCC--SEEE
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeh-HHHHHhhhhc---------CCCEEEecCCCC-CCCCC--CEEE
Confidence 5567899999999999999999985 7889999999 8888766543 589999999987 56544 9999
Q ss_pred ecccccCcccH--HHHHHHHHhcccCCCEEEEEeecCCCchhHH---HHHHHHHhhhhhhhhccCCchhhhhhhHHHHhc
Q 025144 147 MGYGLRNVVDK--RKALEESFRVLKPGSRISVLDFNKSTQPFTT---AIQEWMIDNVVVPVASGYGLAEEYQYLKSSIRE 221 (257)
Q Consensus 147 ~~~~l~~~~~~--~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (257)
+.+++|++++. ..+|++++++|||||.+++.+...+...... .......-.+..... ...
T Consensus 267 ~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~---------------~g~ 331 (368)
T 3reo_A 267 IKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNP---------------GGK 331 (368)
T ss_dssp EESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSS---------------BCC
T ss_pred EechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcC---------------CCc
Confidence 99999999754 5789999999999999999987755432111 111111100000000 013
Q ss_pred cCCHHHHHHHHHHcCceeeEEeeecCceeEE
Q 025144 222 FLTGKDLEKLALEIGFSRAKHYELSGGLMGN 252 (257)
Q Consensus 222 ~~~~~~~~~~l~~~Gf~~~~~~~~~~g~~~~ 252 (257)
.++.++|+++|+++||+++++....++.+.+
T Consensus 332 ~rt~~e~~~ll~~AGF~~v~~~~~~~~~~vi 362 (368)
T 3reo_A 332 ERTEKEFQALAMASGFRGFKVASCAFNTYVM 362 (368)
T ss_dssp CCCHHHHHHHHHHTTCCEEEEEEEETTEEEE
T ss_pred cCCHHHHHHHHHHCCCeeeEEEEeCCCcEEE
Confidence 4688999999999999999999887665533
No 65
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.85 E-value=1.1e-19 Score=151.33 Aligned_cols=173 Identities=19% Similarity=0.163 Sum_probs=124.6
Q ss_pred HHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCC
Q 025144 61 AVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDC 140 (257)
Q Consensus 61 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 140 (257)
+...+...++.+|||||||+|..+..+++.+ ++.+++++|+ +.+++.+++++...+.. .++.++.+|+.+ +++.
T Consensus 174 ~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~-~~~~- 247 (374)
T 1qzz_A 174 PADAYDWSAVRHVLDVGGGNGGMLAAIALRA-PHLRGTLVEL-AGPAERARRRFADAGLA--DRVTVAEGDFFK-PLPV- 247 (374)
T ss_dssp HHHTSCCTTCCEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCT--TTEEEEECCTTS-CCSC-
T ss_pred HHHhCCCCCCCEEEEECCCcCHHHHHHHHHC-CCCEEEEEeC-HHHHHHHHHHHHhcCCC--CceEEEeCCCCC-cCCC-
Confidence 4444556678899999999999999999985 6789999999 99999999987654322 489999999976 3443
Q ss_pred cccEEEecccccCcccH--HHHHHHHHhcccCCCEEEEEee--cCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhH
Q 025144 141 FFDAITMGYGLRNVVDK--RKALEESFRVLKPGSRISVLDF--NKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLK 216 (257)
Q Consensus 141 ~~D~v~~~~~l~~~~~~--~~~l~~~~~~Lk~gG~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (257)
.||+|++.+++|++++. ..++++++++|||||.+++.+. ..+.... .....+....+. .
T Consensus 248 ~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~-~~~~~~~~~~~~-~--------------- 310 (374)
T 1qzz_A 248 TADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGAD-RFFSTLLDLRML-T--------------- 310 (374)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH--------HHHHHHHHHHHH-H---------------
T ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCC-cchhhhcchHHH-H---------------
Confidence 49999999999999875 4899999999999999999887 4332211 111111110000 0
Q ss_pred HHHhccCCHHHHHHHHHHcCceeeEEeeecCcee----EEEeee
Q 025144 217 SSIREFLTGKDLEKLALEIGFSRAKHYELSGGLM----GNLVAT 256 (257)
Q Consensus 217 ~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~g~~----~~~~~~ 256 (257)
....+.++.+++.++|+++||++++........+ .++.++
T Consensus 311 ~~~~~~~~~~~~~~ll~~aGf~~~~~~~~~~~~~~~~~~~i~~~ 354 (374)
T 1qzz_A 311 FMGGRVRTRDEVVDLAGSAGLALASERTSGSTTLPFDFSILEFT 354 (374)
T ss_dssp HHSCCCCCHHHHHHHHHTTTEEEEEEEEECCSSCSSCEEEEEEE
T ss_pred hCCCcCCCHHHHHHHHHHCCCceEEEEECCCCcccCCcEEEEEE
Confidence 0012457999999999999999999887744321 555554
No 66
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.84 E-value=2.2e-20 Score=144.29 Aligned_cols=117 Identities=21% Similarity=0.212 Sum_probs=94.7
Q ss_pred HHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhc--cCCCeeEEEccCCCCCC
Q 025144 60 MAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKA--CYKNIEWVEGDALDLPF 137 (257)
Q Consensus 60 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~--~~~~~~~~~~d~~~~~~ 137 (257)
.+...+...++.+|||+|||+|.++..+++.. +..+++++|+|+.+++.+++++...+.. ...++.++++|+...+.
T Consensus 20 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 98 (219)
T 3jwg_A 20 TVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDK-SFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDK 98 (219)
T ss_dssp HHHHHHHHTTCCEEEEETCTTCHHHHHHHTST-TCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCG
T ss_pred HHHHHHhhcCCCEEEEecCCCCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccccc
Confidence 34444444567899999999999999998873 5579999999999999999987543211 01289999999987776
Q ss_pred CCCcccEEEecccccCcccH--HHHHHHHHhcccCCCEEEEE
Q 025144 138 SDCFFDAITMGYGLRNVVDK--RKALEESFRVLKPGSRISVL 177 (257)
Q Consensus 138 ~~~~~D~v~~~~~l~~~~~~--~~~l~~~~~~Lk~gG~l~~~ 177 (257)
++++||+|++..++++++++ ..+++++.++|||||.++..
T Consensus 99 ~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 99 RFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVST 140 (219)
T ss_dssp GGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred ccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEc
Confidence 67899999999999999855 79999999999999966544
No 67
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.84 E-value=7.5e-20 Score=141.91 Aligned_cols=117 Identities=27% Similarity=0.435 Sum_probs=96.9
Q ss_pred HHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCC
Q 025144 55 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD 134 (257)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 134 (257)
+.+...+...+ .++.+|||+|||+|..+..+++.. .+++++|+|+.+++.++++....+ .++.++++|+.+
T Consensus 26 ~~~~~~l~~~~--~~~~~vLDlG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~ 96 (227)
T 1ve3_A 26 ETLEPLLMKYM--KKRGKVLDLACGVGGFSFLLEDYG---FEVVGVDISEDMIRKAREYAKSRE----SNVEFIVGDARK 96 (227)
T ss_dssp HHHHHHHHHSC--CSCCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTT----CCCEEEECCTTS
T ss_pred HHHHHHHHHhc--CCCCeEEEEeccCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHhcC----CCceEEECchhc
Confidence 33444444433 347799999999999999998772 399999999999999999876543 589999999998
Q ss_pred CCCCCCcccEEEeccc--ccCcccHHHHHHHHHhcccCCCEEEEEeec
Q 025144 135 LPFSDCFFDAITMGYG--LRNVVDKRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 135 ~~~~~~~~D~v~~~~~--l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
+++++++||+|++..+ +++.+++..++++++++|+|||.+++.+.+
T Consensus 97 ~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 97 LSFEDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp CCSCTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCCCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 8777789999999999 556668899999999999999999988765
No 68
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.84 E-value=5.6e-20 Score=141.58 Aligned_cols=166 Identities=20% Similarity=0.199 Sum_probs=122.0
Q ss_pred CchhHHHHhhhhhhhhhhhhhhhhhhh----HHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeC
Q 025144 27 CSSERQELFSRIAPVYDNLNDLLSFGQ----HRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDF 102 (257)
Q Consensus 27 ~~~~~~~~y~~~a~~y~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~ 102 (257)
..+...++|+..+..|+.......... .......+..+....++.+|||+|||+|..+..+. .+++++|+
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~------~~v~~~D~ 94 (215)
T 2zfu_A 21 PSSAAQRLFQEDPEAFLLYHRGFQSQVKKWPLQPVDRIARDLRQRPASLVVADFGCGDCRLASSIR------NPVHCFDL 94 (215)
T ss_dssp CHHHHHHHHHHCHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHTSCTTSCEEEETCTTCHHHHHCC------SCEEEEES
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHhhhcccchhHHHHHHHHHhccCCCCeEEEECCcCCHHHHHhh------ccEEEEeC
Confidence 356677888888888887654322110 00111222223345677899999999999887662 58999999
Q ss_pred ChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeecCC
Q 025144 103 SKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKS 182 (257)
Q Consensus 103 s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~ 182 (257)
|+. ++.+.++|+.++++++++||+|++..++|+ +++..++++++++|+|||.+++.++..
T Consensus 95 s~~------------------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~-~~~~~~l~~~~~~L~~gG~l~i~~~~~- 154 (215)
T 2zfu_A 95 ASL------------------DPRVTVCDMAQVPLEDESVDVAVFCLSLMG-TNIRDFLEEANRVLKPGGLLKVAEVSS- 154 (215)
T ss_dssp SCS------------------STTEEESCTTSCSCCTTCEEEEEEESCCCS-SCHHHHHHHHHHHEEEEEEEEEEECGG-
T ss_pred CCC------------------CceEEEeccccCCCCCCCEeEEEEehhccc-cCHHHHHHHHHHhCCCCeEEEEEEcCC-
Confidence 986 356789999988887889999999999974 889999999999999999999887432
Q ss_pred CchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHHHHhccCCHHHHHHHHHHcCceeeEEeeecCceeEEEeeeC
Q 025144 183 TQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYELSGGLMGNLVATR 257 (257)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~g~~~~~~~~k 257 (257)
.+.+.+++.++++++||++++... ..+.+.+++++|
T Consensus 155 --------------------------------------~~~~~~~~~~~l~~~Gf~~~~~~~-~~~~~~~~~~~k 190 (215)
T 2zfu_A 155 --------------------------------------RFEDVRTFLRAVTKLGFKIVSKDL-TNSHFFLFDFQK 190 (215)
T ss_dssp --------------------------------------GCSCHHHHHHHHHHTTEEEEEEEC-CSTTCEEEEEEE
T ss_pred --------------------------------------CCCCHHHHHHHHHHCCCEEEEEec-CCCeEEEEEEEe
Confidence 123678999999999999887544 344555565554
No 69
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.84 E-value=7.3e-22 Score=166.83 Aligned_cols=172 Identities=15% Similarity=0.118 Sum_probs=123.2
Q ss_pred HHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCC
Q 025144 55 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD 134 (257)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 134 (257)
..+.+.+...+...++.+|||||||+|.++..+++. +.+++++|+|+.+++.++++.... ....+...+...
T Consensus 93 ~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~---g~~v~gvD~s~~~~~~a~~~~~~~-----~~~~~~~~~~~~ 164 (416)
T 4e2x_A 93 AMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEA---GVRHLGFEPSSGVAAKAREKGIRV-----RTDFFEKATADD 164 (416)
T ss_dssp HHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHT---TCEEEEECCCHHHHHHHHTTTCCE-----ECSCCSHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHc---CCcEEEECCCHHHHHHHHHcCCCc-----ceeeechhhHhh
Confidence 344455566667778889999999999999999876 469999999999999998761100 011122333334
Q ss_pred CCCCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhh
Q 025144 135 LPFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQY 214 (257)
Q Consensus 135 ~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (257)
+++++++||+|++.++++|++++..++++++++|||||.+++..++... .... .. .... +
T Consensus 165 l~~~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~------~~~~---~~---~~~~------~-- 224 (416)
T 4e2x_A 165 VRRTEGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPYLGD------IVAK---TS---FDQI------F-- 224 (416)
T ss_dssp HHHHHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEECHHH------HHHH---TC---GGGC------S--
T ss_pred cccCCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCChHH------hhhh---cc---hhhh------h--
Confidence 4455688999999999999999999999999999999999887654211 1000 00 0000 0
Q ss_pred hHHHHhccCCHHHHHHHHHHcCceeeEEeeec--CceeEEEeee
Q 025144 215 LKSSIREFLTGKDLEKLALEIGFSRAKHYELS--GGLMGNLVAT 256 (257)
Q Consensus 215 ~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~--~g~~~~~~~~ 256 (257)
.....+++.+++.++++++||++++...+. +|...+++++
T Consensus 225 --~~~~~~~s~~~l~~ll~~aGf~~~~~~~~~~~~g~l~~~~~~ 266 (416)
T 4e2x_A 225 --DEHFFLFSATSVQGMAQRCGFELVDVQRLPVHGGEVRYTLAR 266 (416)
T ss_dssp --TTCCEECCHHHHHHHHHHTTEEEEEEEEECGGGSEEEEEEEE
T ss_pred --hhhhhcCCHHHHHHHHHHcCCEEEEEEEccCCCCEEEEEEEe
Confidence 111246799999999999999999988754 6666666654
No 70
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.84 E-value=2.8e-20 Score=146.69 Aligned_cols=139 Identities=27% Similarity=0.374 Sum_probs=103.6
Q ss_pred HHhhhhhhhhhhhhhhhhh--hhHHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHH
Q 025144 33 ELFSRIAPVYDNLNDLLSF--GQHRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMA 110 (257)
Q Consensus 33 ~~y~~~a~~y~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a 110 (257)
++|+.+++.|+........ .....+...+.......++.+|||+|||+|..+..+++. +.+++++|+|+.+++.+
T Consensus 3 ~~y~~~a~~yd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a 79 (252)
T 1wzn_A 3 ELYTLLAEYYDTIYRRRIERVKAEIDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAER---GYEVVGLDLHEEMLRVA 79 (252)
T ss_dssp GGGTTTGGGHHHHTHHHHHTHHHHHHHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHC---CCeEEEEECCHHHHHHH
Confidence 5788888888886542211 111122222333344456789999999999999999876 56999999999999999
Q ss_pred HhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEeccc-ccCc--ccHHHHHHHHHhcccCCCEEEEEee
Q 025144 111 SSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGYG-LRNV--VDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~-l~~~--~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
+++....+ .++.++++|+.+++++ ++||+|++... ++++ ++...++++++++|+|||.+++...
T Consensus 80 ~~~~~~~~----~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 80 RRKAKERN----LKIEFLQGDVLEIAFK-NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp HHHHHHTT----CCCEEEESCGGGCCCC-SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHhcC----CceEEEECChhhcccC-CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 99876543 4799999999987754 68999998643 4444 3578899999999999999977543
No 71
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.84 E-value=3.4e-19 Score=147.62 Aligned_cols=165 Identities=15% Similarity=0.134 Sum_probs=120.5
Q ss_pred HhhhC-CCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCC
Q 025144 62 VSWSG-AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDC 140 (257)
Q Consensus 62 ~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 140 (257)
...+. ..+..+|||||||+|..+..+++.+ |+.+++++|+ +.+++.+++. ++++++.+|+.+ +++.+
T Consensus 193 ~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~---------~~v~~~~~D~~~-~~p~~ 260 (364)
T 3p9c_A 193 LELYHGFEGLGTLVDVGGGVGATVAAIAAHY-PTIKGVNFDL-PHVISEAPQF---------PGVTHVGGDMFK-EVPSG 260 (364)
T ss_dssp HHHCCTTTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCC---------TTEEEEECCTTT-CCCCC
T ss_pred HHhcccccCCCEEEEeCCCCCHHHHHHHHHC-CCCeEEEecC-HHHHHhhhhc---------CCeEEEeCCcCC-CCCCC
Confidence 33344 6677899999999999999999985 7889999999 8887766543 589999999988 66644
Q ss_pred cccEEEecccccCccc--HHHHHHHHHhcccCCCEEEEEeecCCCchhHH---HHHHHHHhhhhhhhhccCCchhhhhhh
Q 025144 141 FFDAITMGYGLRNVVD--KRKALEESFRVLKPGSRISVLDFNKSTQPFTT---AIQEWMIDNVVVPVASGYGLAEEYQYL 215 (257)
Q Consensus 141 ~~D~v~~~~~l~~~~~--~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (257)
|+|++.+++|++++ ...+|++++++|||||.+++.+...+...... .........+.....
T Consensus 261 --D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~------------ 326 (364)
T 3p9c_A 261 --DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNP------------ 326 (364)
T ss_dssp --SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCS------------
T ss_pred --CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhccc------------
Confidence 99999999999964 56889999999999999999987765432111 111111101100000
Q ss_pred HHHHhccCCHHHHHHHHHHcCceeeEEeeecCceeEEEeee
Q 025144 216 KSSIREFLTGKDLEKLALEIGFSRAKHYELSGGLMGNLVAT 256 (257)
Q Consensus 216 ~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~g~~~~~~~~ 256 (257)
....++.++|+++|+++||+++++....+..+ ++.+.
T Consensus 327 ---~g~~rt~~e~~~ll~~AGF~~v~~~~~~~~~~-vie~~ 363 (364)
T 3p9c_A 327 ---GGRERYEREFQALARGAGFTGVKSTYIYANAW-AIEFT 363 (364)
T ss_dssp ---SCCCCBHHHHHHHHHHTTCCEEEEEEEETTEE-EEEEE
T ss_pred ---CCccCCHHHHHHHHHHCCCceEEEEEcCCceE-EEEEe
Confidence 01345889999999999999999988865544 44443
No 72
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.83 E-value=3.2e-19 Score=147.89 Aligned_cols=174 Identities=20% Similarity=0.214 Sum_probs=127.3
Q ss_pred HHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCC
Q 025144 61 AVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDC 140 (257)
Q Consensus 61 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 140 (257)
+...+...++.+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++++...+.. .++.++.+|+.+ +++.
T Consensus 175 l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~-~~~~- 248 (360)
T 1tw3_A 175 PAAAYDWTNVRHVLDVGGGKGGFAAAIARRA-PHVSATVLEM-AGTVDTARSYLKDEGLS--DRVDVVEGDFFE-PLPR- 248 (360)
T ss_dssp HHHHSCCTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-TTHHHHHHHHHHHTTCT--TTEEEEECCTTS-CCSS-
T ss_pred HHHhCCCccCcEEEEeCCcCcHHHHHHHHhC-CCCEEEEecC-HHHHHHHHHHHHhcCCC--CceEEEeCCCCC-CCCC-
Confidence 3444566778899999999999999999984 6789999999 99999999987654432 489999999976 3443
Q ss_pred cccEEEecccccCcccH--HHHHHHHHhcccCCCEEEEEeec-CCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHH
Q 025144 141 FFDAITMGYGLRNVVDK--RKALEESFRVLKPGSRISVLDFN-KSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKS 217 (257)
Q Consensus 141 ~~D~v~~~~~l~~~~~~--~~~l~~~~~~Lk~gG~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (257)
.||+|++.+++|++++. ..++++++++|+|||.+++.+.. .+.... .....+....+.. .
T Consensus 249 ~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~-~~~~~~~~~~~~~----------------~ 311 (360)
T 1tw3_A 249 KADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSF-NEQFTELDLRMLV----------------F 311 (360)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCC-SHHHHHHHHHHHH----------------H
T ss_pred CccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCC-cchhhhccHHHhh----------------h
Confidence 49999999999999865 58999999999999999998876 332211 0111111100000 0
Q ss_pred HHhccCCHHHHHHHHHHcCceeeEEeeecCc----eeEEEeeeC
Q 025144 218 SIREFLTGKDLEKLALEIGFSRAKHYELSGG----LMGNLVATR 257 (257)
Q Consensus 218 ~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~g----~~~~~~~~k 257 (257)
.....++.+++.++|+++||++++....... ...++.++|
T Consensus 312 ~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~~~~~~i~~~~ 355 (360)
T 1tw3_A 312 LGGALRTREKWDGLAASAGLVVEEVRQLPSPTIPYDLSLLVLAP 355 (360)
T ss_dssp HSCCCCBHHHHHHHHHHTTEEEEEEEEEECSSSSCEEEEEEEEE
T ss_pred cCCcCCCHHHHHHHHHHCCCeEEEEEeCCCCcccCccEEEEEEe
Confidence 0124568999999999999999998877543 155666553
No 73
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.83 E-value=6.6e-20 Score=144.13 Aligned_cols=155 Identities=17% Similarity=0.168 Sum_probs=113.7
Q ss_pred HHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhh---------hhh-----ccC
Q 025144 57 WKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDL---------VSK-----ACY 122 (257)
Q Consensus 57 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~---------~~~-----~~~ 122 (257)
+.+.+.......++.+|||+|||+|..+..|++. +.+|+|+|+|+.|++.|+++... .+. ...
T Consensus 56 l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~---G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (252)
T 2gb4_A 56 LKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADR---GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSS 132 (252)
T ss_dssp HHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHT---TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETT
T ss_pred HHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHC---CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCC
Confidence 3333433334456789999999999999999976 57999999999999999876531 000 011
Q ss_pred CCeeEEEccCCCCCCCC-CcccEEEecccccCcc--cHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhh
Q 025144 123 KNIEWVEGDALDLPFSD-CFFDAITMGYGLRNVV--DKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVV 199 (257)
Q Consensus 123 ~~~~~~~~d~~~~~~~~-~~~D~v~~~~~l~~~~--~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (257)
.++.++++|+.++++++ ++||+|++..++++++ +...+++++.++|||||.+++.++.......
T Consensus 133 ~~i~~~~~D~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~------------- 199 (252)
T 2gb4_A 133 GSISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKH------------- 199 (252)
T ss_dssp SSEEEEESCTTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSC-------------
T ss_pred CceEEEECccccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccC-------------
Confidence 58999999999987653 7899999999999885 4577899999999999999766554321100
Q ss_pred hhhhccCCchhhhhhhHHHHhccCCHHHHHHHHHHcCceeeEEeee
Q 025144 200 VPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYEL 245 (257)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 245 (257)
.+ .. ..++.+++.+++.. +|+++.....
T Consensus 200 ---~g-----~~---------~~~~~~el~~~l~~-~f~v~~~~~~ 227 (252)
T 2gb4_A 200 ---AG-----PP---------FYVPSAELKRLFGT-KCSMQCLEEV 227 (252)
T ss_dssp ---CC-----SS---------CCCCHHHHHHHHTT-TEEEEEEEEE
T ss_pred ---CC-----CC---------CCCCHHHHHHHhhC-CeEEEEEecc
Confidence 00 00 12578999999987 5998876543
No 74
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.83 E-value=2.2e-19 Score=135.82 Aligned_cols=129 Identities=24% Similarity=0.280 Sum_probs=109.3
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEE
Q 025144 67 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAIT 146 (257)
Q Consensus 67 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 146 (257)
..++.+|||+|||+|..+..+++. +.+++++|+|+.+++.++++. .++.+++.|+.+.++++++||+|+
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~--------~~~~~~~~d~~~~~~~~~~~D~i~ 112 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ---GHDVLGTDLDPILIDYAKQDF--------PEARWVVGDLSVDQISETDFDLIV 112 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHC--------TTSEEEECCTTTSCCCCCCEEEEE
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC---CCcEEEEcCCHHHHHHHHHhC--------CCCcEEEcccccCCCCCCceeEEE
Confidence 457789999999999999999876 469999999999999999876 578999999998877778999999
Q ss_pred ec-ccccCc--ccHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHHHHhccC
Q 025144 147 MG-YGLRNV--VDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFL 223 (257)
Q Consensus 147 ~~-~~l~~~--~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (257)
+. .+++++ ++...+++++.++|+|||.+++...... .+
T Consensus 113 ~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~---------------------------------------~~ 153 (195)
T 3cgg_A 113 SAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGAGR---------------------------------------GW 153 (195)
T ss_dssp ECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTS---------------------------------------SC
T ss_pred ECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCC---------------------------------------Cc
Confidence 98 678877 4568899999999999999988654321 13
Q ss_pred CHHHHHHHHHHcCceeeEEeee
Q 025144 224 TGKDLEKLALEIGFSRAKHYEL 245 (257)
Q Consensus 224 ~~~~~~~~l~~~Gf~~~~~~~~ 245 (257)
+.+++.++++++||++++....
T Consensus 154 ~~~~~~~~l~~~Gf~~~~~~~~ 175 (195)
T 3cgg_A 154 VFGDFLEVAERVGLELENAFES 175 (195)
T ss_dssp CHHHHHHHHHHHTEEEEEEESS
T ss_pred CHHHHHHHHHHcCCEEeeeecc
Confidence 6789999999999999887543
No 75
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.83 E-value=1.6e-19 Score=150.19 Aligned_cols=167 Identities=20% Similarity=0.209 Sum_probs=122.9
Q ss_pred HHhhhC-CCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCC
Q 025144 61 AVSWSG-AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSD 139 (257)
Q Consensus 61 ~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 139 (257)
+...+. ..++.+|||||||+|..+..+++.+ +..+++++|+ +.+++.+++. ++++++.+|+.+ +++.
T Consensus 200 l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~---------~~v~~~~~d~~~-~~~~ 267 (372)
T 1fp1_D 200 MLEIYTGFEGISTLVDVGGGSGRNLELIISKY-PLIKGINFDL-PQVIENAPPL---------SGIEHVGGDMFA-SVPQ 267 (372)
T ss_dssp HHHHCCTTTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCC---------TTEEEEECCTTT-CCCC
T ss_pred HHHHhhccCCCCEEEEeCCCCcHHHHHHHHHC-CCCeEEEeCh-HHHHHhhhhc---------CCCEEEeCCccc-CCCC
Confidence 333443 5667899999999999999999985 6789999999 8888776642 579999999987 5553
Q ss_pred CcccEEEecccccCcccHH--HHHHHHHhcccCCCEEEEEeecCCCchhHHH---HHHHHHhhhhhhhhccCCchhhhhh
Q 025144 140 CFFDAITMGYGLRNVVDKR--KALEESFRVLKPGSRISVLDFNKSTQPFTTA---IQEWMIDNVVVPVASGYGLAEEYQY 214 (257)
Q Consensus 140 ~~~D~v~~~~~l~~~~~~~--~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (257)
||+|++.+++|++++.. .+|++++++|||||.+++.+...+....... ...+....+..
T Consensus 268 --~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~-------------- 331 (372)
T 1fp1_D 268 --GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFI-------------- 331 (372)
T ss_dssp --EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHH--------------
T ss_pred --CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHh--------------
Confidence 99999999999998876 9999999999999999998866544321100 11111100000
Q ss_pred hHHHHhccCCHHHHHHHHHHcCceeeEEeeecCceeEEEeeeC
Q 025144 215 LKSSIREFLTGKDLEKLALEIGFSRAKHYELSGGLMGNLVATR 257 (257)
Q Consensus 215 ~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~g~~~~~~~~k 257 (257)
......++.++|.++|+++||++++......+.+.++.++|
T Consensus 332 --~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~vie~~~ 372 (372)
T 1fp1_D 332 --TVGGRERTEKQYEKLSKLSGFSKFQVACRAFNSLGVMEFYK 372 (372)
T ss_dssp --HHSCCCEEHHHHHHHHHHTTCSEEEEEEEETTTEEEEEEEC
T ss_pred --ccCCccCCHHHHHHHHHHCCCceEEEEEcCCCCeEEEEEeC
Confidence 00013458899999999999999998886555236766664
No 76
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.83 E-value=7.5e-20 Score=140.13 Aligned_cols=157 Identities=18% Similarity=0.232 Sum_probs=116.4
Q ss_pred CCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEE
Q 025144 66 GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAI 145 (257)
Q Consensus 66 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v 145 (257)
...++.+|||+|||+|..+..++.. ++.+++++|+|+.+++.++++....+ .++.+.++|+.++++++++||+|
T Consensus 20 ~~~~~~~vLDiGcG~G~~~~~~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~~~~~~fD~v 93 (209)
T 2p8j_A 20 ESNLDKTVLDCGAGGDLPPLSIFVE--DGYKTYGIEISDLQLKKAENFSRENN----FKLNISKGDIRKLPFKDESMSFV 93 (209)
T ss_dssp HSSSCSEEEEESCCSSSCTHHHHHH--TTCEEEEEECCHHHHHHHHHHHHHHT----CCCCEEECCTTSCCSCTTCEEEE
T ss_pred ccCCCCEEEEECCCCCHHHHHHHHh--CCCEEEEEECCHHHHHHHHHHHHhcC----CceEEEECchhhCCCCCCceeEE
Confidence 4556789999999999985555444 36799999999999999999876543 57899999999988878899999
Q ss_pred EecccccCc--ccHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhH---HHHh
Q 025144 146 TMGYGLRNV--VDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLK---SSIR 220 (257)
Q Consensus 146 ~~~~~l~~~--~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 220 (257)
++..+++|+ +++..++++++++|||||.+++.+++.+...... .. +... ..|.... ....
T Consensus 94 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~--------~~--~~~~-----~~~~~~~~~~~~~~ 158 (209)
T 2p8j_A 94 YSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNK--------GE--KIGE-----GEFLQLERGEKVIH 158 (209)
T ss_dssp EECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTC--------SE--EEET-----TEEEECC-CCCEEE
T ss_pred EEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhccc--------hh--hhcc-----ccceeccCCCceeE
Confidence 999999999 6789999999999999999999887754422100 00 0000 0000000 0012
Q ss_pred ccCCHHHHHHHHHHcCceeeEEe
Q 025144 221 EFLTGKDLEKLALEIGFSRAKHY 243 (257)
Q Consensus 221 ~~~~~~~~~~~l~~~Gf~~~~~~ 243 (257)
++++.+++.+++++.||...+..
T Consensus 159 ~~~~~~e~~~~~~~~g~~~~~~~ 181 (209)
T 2p8j_A 159 SYVSLEEADKYFKDMKVLFKEDR 181 (209)
T ss_dssp EEECHHHHHHTTTTSEEEEEEEE
T ss_pred EecCHHHHHHHHhhcCceeeeee
Confidence 46799999999999999766544
No 77
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.83 E-value=1.8e-19 Score=145.72 Aligned_cols=111 Identities=20% Similarity=0.304 Sum_probs=96.9
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhh-hhccCCCeeEEEccCCCCCCCC------
Q 025144 67 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLV-SKACYKNIEWVEGDALDLPFSD------ 139 (257)
Q Consensus 67 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~------ 139 (257)
..++.+|||+|||+|..+..+++.+.+..+|+++|+|+.+++.++++.... +. ..++.++++|+.++++++
T Consensus 34 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~ 111 (299)
T 3g5t_A 34 DGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDT--YKNVSFKISSSDDFKFLGADSVDK 111 (299)
T ss_dssp CSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-C--CTTEEEEECCTTCCGGGCTTTTTS
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCC--CCceEEEEcCHHhCCccccccccC
Confidence 357789999999999999999987546789999999999999999987654 11 168999999999987666
Q ss_pred CcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeec
Q 025144 140 CFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 140 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
++||+|++..+++++ ++..+++++.++|||||.+++.++.
T Consensus 112 ~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~i~~~~ 151 (299)
T 3g5t_A 112 QKIDMITAVECAHWF-DFEKFQRSAYANLRKDGTIAIWGYA 151 (299)
T ss_dssp SCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCeeEEeHhhHHHHh-CHHHHHHHHHHhcCCCcEEEEEecC
Confidence 799999999999999 9999999999999999999885543
No 78
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.83 E-value=4e-20 Score=140.51 Aligned_cols=148 Identities=17% Similarity=0.120 Sum_probs=116.3
Q ss_pred HHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCC
Q 025144 61 AVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDC 140 (257)
Q Consensus 61 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 140 (257)
+...+...++.+|||+|||+|..+..+++. +.+++++|+|+.+++.++++....+. +++.+..+|+.+.++ ++
T Consensus 24 l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~---~~~~~~~~d~~~~~~-~~ 96 (199)
T 2xvm_A 24 VLEAVKVVKPGKTLDLGCGNGRNSLYLAAN---GYDVDAWDKNAMSIANVERIKSIENL---DNLHTRVVDLNNLTF-DR 96 (199)
T ss_dssp HHHHTTTSCSCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTC---TTEEEEECCGGGCCC-CC
T ss_pred HHHHhhccCCCeEEEEcCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhCCC---CCcEEEEcchhhCCC-CC
Confidence 334445556789999999999999999876 56999999999999999998765432 479999999998877 78
Q ss_pred cccEEEecccccCcc--cHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHHH
Q 025144 141 FFDAITMGYGLRNVV--DKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSS 218 (257)
Q Consensus 141 ~~D~v~~~~~l~~~~--~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (257)
+||+|++..++++++ +...+++++.++|||||.+++.+......... + ..
T Consensus 97 ~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~-------------~--------~~------- 148 (199)
T 2xvm_A 97 QYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPC-------------T--------VG------- 148 (199)
T ss_dssp CEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCC-------------C--------SC-------
T ss_pred CceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCC-------------C--------CC-------
Confidence 899999999999997 78999999999999999988876554332100 0 00
Q ss_pred HhccCCHHHHHHHHHHcCceeeEEeee
Q 025144 219 IREFLTGKDLEKLALEIGFSRAKHYEL 245 (257)
Q Consensus 219 ~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 245 (257)
....++.+++.+++++ |++++..+.
T Consensus 149 ~~~~~~~~~l~~~~~~--f~~~~~~~~ 173 (199)
T 2xvm_A 149 FPFAFKEGELRRYYEG--WERVKYNED 173 (199)
T ss_dssp CSCCBCTTHHHHHTTT--SEEEEEECC
T ss_pred CCCccCHHHHHHHhcC--CeEEEeccc
Confidence 0124588999999976 998886643
No 79
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.82 E-value=7.1e-20 Score=147.58 Aligned_cols=125 Identities=24% Similarity=0.256 Sum_probs=102.9
Q ss_pred hHHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhh-ccCCCeeEEEcc
Q 025144 53 QHRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSK-ACYKNIEWVEGD 131 (257)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~-~~~~~~~~~~~d 131 (257)
....+.+.+...+...++.+|||+|||+|..+..+++. +.+|+++|+|+.|++.++++...... ....++.+..+|
T Consensus 41 ~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d 117 (293)
T 3thr_A 41 RTAEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEE---GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEAN 117 (293)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECC
T ss_pred hHHHHHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecC
Confidence 34556667777766667889999999999999999887 45999999999999999887532111 011478899999
Q ss_pred CCCCC---CCCCcccEEEec-ccccCccc-------HHHHHHHHHhcccCCCEEEEEeec
Q 025144 132 ALDLP---FSDCFFDAITMG-YGLRNVVD-------KRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 132 ~~~~~---~~~~~~D~v~~~-~~l~~~~~-------~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
..+++ +++++||+|++. ++++|+++ +..++++++++|||||.+++...+
T Consensus 118 ~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 118 WLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp GGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred hhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 98876 677899999998 89999998 999999999999999999887654
No 80
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.82 E-value=9.8e-19 Score=139.24 Aligned_cols=148 Identities=14% Similarity=0.068 Sum_probs=110.2
Q ss_pred CCCCCeEEEecCCC---ChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-------
Q 025144 67 AKTGDNVLDVCCGS---GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP------- 136 (257)
Q Consensus 67 ~~~~~~vLdiG~G~---G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~------- 136 (257)
..+..+|||||||+ |..+..+.+. .|+.+|+++|+|+.|++.+++++... .++.++++|+.+..
T Consensus 75 ~~~~~~vLDlGcG~pt~G~~~~~~~~~-~p~~~v~~vD~sp~~l~~Ar~~~~~~-----~~v~~~~~D~~~~~~~~~~~~ 148 (274)
T 2qe6_A 75 EAGISQFLDLGSGLPTVQNTHEVAQSV-NPDARVVYVDIDPMVLTHGRALLAKD-----PNTAVFTADVRDPEYILNHPD 148 (274)
T ss_dssp TTCCCEEEEETCCSCCSSCHHHHHHHH-CTTCEEEEEESSHHHHHHHHHHHTTC-----TTEEEEECCTTCHHHHHHSHH
T ss_pred ccCCCEEEEECCCCCCCChHHHHHHHh-CCCCEEEEEECChHHHHHHHHhcCCC-----CCeEEEEeeCCCchhhhccch
Confidence 34457999999999 9887666665 47789999999999999999987432 58999999997631
Q ss_pred ----CCCCcccEEEecccccCccc--HHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchh
Q 025144 137 ----FSDCFFDAITMGYGLRNVVD--KRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAE 210 (257)
Q Consensus 137 ----~~~~~~D~v~~~~~l~~~~~--~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (257)
++.++||+|++..++|++++ +..++++++++|+|||.|++.+...............+...
T Consensus 149 ~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~~~~~~~~~~~~~~~------------- 215 (274)
T 2qe6_A 149 VRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTGLPAQQKLARITREN------------- 215 (274)
T ss_dssp HHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSSCHHHHHHHHHHHHH-------------
T ss_pred hhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcchHHHHHHHHHHHhc-------------
Confidence 33357999999999999986 89999999999999999999887753311111111111100
Q ss_pred hhhhhHHHHhccCCHHHHHHHHHHcCceeeE
Q 025144 211 EYQYLKSSIREFLTGKDLEKLALEIGFSRAK 241 (257)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 241 (257)
.....+++.+++.++| .||++++
T Consensus 216 ------~~~~~~~s~~ei~~~l--~G~~l~~ 238 (274)
T 2qe6_A 216 ------LGEGWARTPEEIERQF--GDFELVE 238 (274)
T ss_dssp ------HSCCCCBCHHHHHHTT--TTCEECT
T ss_pred ------CCCCccCCHHHHHHHh--CCCeEcc
Confidence 0011356899999999 5998775
No 81
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.82 E-value=3.6e-19 Score=147.07 Aligned_cols=159 Identities=21% Similarity=0.287 Sum_probs=119.7
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEE
Q 025144 67 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAIT 146 (257)
Q Consensus 67 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 146 (257)
..+..+|||||||+|..+..+++.+ |+.+++++|+ +.+++.+++. +++.++.+|+.+ +++ .||+|+
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~---------~~v~~~~~d~~~-~~p--~~D~v~ 251 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETF-PKLKCIVFDR-PQVVENLSGS---------NNLTYVGGDMFT-SIP--NADAVL 251 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCB---------TTEEEEECCTTT-CCC--CCSEEE
T ss_pred cccCceEEEeCCCccHHHHHHHHHC-CCCeEEEeeC-HHHHhhcccC---------CCcEEEeccccC-CCC--CccEEE
Confidence 3456799999999999999999985 6789999999 9998877652 469999999976 544 399999
Q ss_pred ecccccCcccHH--HHHHHHHhcccC---CCEEEEEeecCCCchhH---HHHHHHHHhhhhhhhhccCCchhhhhhhHHH
Q 025144 147 MGYGLRNVVDKR--KALEESFRVLKP---GSRISVLDFNKSTQPFT---TAIQEWMIDNVVVPVASGYGLAEEYQYLKSS 218 (257)
Q Consensus 147 ~~~~l~~~~~~~--~~l~~~~~~Lk~---gG~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (257)
+.+++|++++.. .+|++++++||| ||.+++.+...+..... ..........+.. ..
T Consensus 252 ~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~-~~--------------- 315 (352)
T 1fp2_A 252 LKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMAC-LN--------------- 315 (352)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGG-GT---------------
T ss_pred eehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHh-cc---------------
Confidence 999999998776 999999999999 99999998765443211 1111111100100 00
Q ss_pred HhccCCHHHHHHHHHHcCceeeEEeeecCceeEEEeeeC
Q 025144 219 IREFLTGKDLEKLALEIGFSRAKHYELSGGLMGNLVATR 257 (257)
Q Consensus 219 ~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~g~~~~~~~~k 257 (257)
...++.++|.++++++||++++.... .+...++.+++
T Consensus 316 -g~~~t~~e~~~ll~~aGf~~~~~~~~-~~~~~vie~~~ 352 (352)
T 1fp2_A 316 -GKERNEEEWKKLFIEAGFQHYKISPL-TGFLSLIEIYP 352 (352)
T ss_dssp -CCCEEHHHHHHHHHHTTCCEEEEEEE-ETTEEEEEEEC
T ss_pred -CCCCCHHHHHHHHHHCCCCeeEEEec-CCCcEEEEEeC
Confidence 12458899999999999999998875 45566776654
No 82
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.82 E-value=3.1e-20 Score=149.41 Aligned_cols=151 Identities=12% Similarity=0.129 Sum_probs=106.8
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhh--------------cc------------
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSK--------------AC------------ 121 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~--------------~~------------ 121 (257)
.++.+|||||||+|.....++.. +..+|+++|+|+.|++.|+++++.... ..
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 147 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACS--HFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQL 147 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGG--GCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhcc--CCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHH
Confidence 36789999999999955434332 356999999999999999886542100 00
Q ss_pred -CCCeeEEEccCCC-CC-----CCCCcccEEEecccccC----cccHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHH
Q 025144 122 -YKNIEWVEGDALD-LP-----FSDCFFDAITMGYGLRN----VVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAI 190 (257)
Q Consensus 122 -~~~~~~~~~d~~~-~~-----~~~~~~D~v~~~~~l~~----~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~ 190 (257)
...+.++.+|+.+ .+ +++++||+|++++++++ ++++..++++++++|||||.+++...........
T Consensus 148 ~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~--- 224 (289)
T 2g72_A 148 RARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLA--- 224 (289)
T ss_dssp HHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEE---
T ss_pred HhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEc---
Confidence 0014677789887 44 33467999999999999 6678999999999999999998875332110000
Q ss_pred HHHHHhhhhhhhhccCCchhhhhhhHHHHhccCCHHHHHHHHHHcCceeeEEeeec
Q 025144 191 QEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYELS 246 (257)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 246 (257)
+. ..+ ...+++.+++.++|+++||+++++....
T Consensus 225 ----------------~~-~~~------~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 257 (289)
T 2g72_A 225 ----------------GE-ARL------TVVPVSEEEVREALVRSGYKVRDLRTYI 257 (289)
T ss_dssp ----------------TT-EEE------ECCCCCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred ----------------CC-eee------eeccCCHHHHHHHHHHcCCeEEEeeEee
Confidence 00 000 0135689999999999999999877654
No 83
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.82 E-value=1.6e-19 Score=139.05 Aligned_cols=116 Identities=19% Similarity=0.298 Sum_probs=99.9
Q ss_pred HHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC
Q 025144 56 IWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL 135 (257)
Q Consensus 56 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 135 (257)
.....+...+...++.+|||+|||+|.++..+++. +.+++++|+|+.+++.++++.... +++.++++|+.++
T Consensus 38 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~~~~ 109 (216)
T 3ofk_A 38 RHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPH---CKRLTVIDVMPRAIGRACQRTKRW-----SHISWAATDILQF 109 (216)
T ss_dssp HHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGG---EEEEEEEESCHHHHHHHHHHTTTC-----SSEEEEECCTTTC
T ss_pred HHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcccC-----CCeEEEEcchhhC
Confidence 44555665677778889999999999999999876 369999999999999999987543 4899999999998
Q ss_pred CCCCCcccEEEecccccCcccH---HHHHHHHHhcccCCCEEEEEeec
Q 025144 136 PFSDCFFDAITMGYGLRNVVDK---RKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 136 ~~~~~~~D~v~~~~~l~~~~~~---~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
+ ++++||+|++..+++|++++ ..+++++.++|||||.+++.+..
T Consensus 110 ~-~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 110 S-TAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp C-CSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred C-CCCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 7 57899999999999999876 56799999999999999887654
No 84
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.82 E-value=3.4e-19 Score=138.33 Aligned_cols=160 Identities=23% Similarity=0.292 Sum_probs=118.0
Q ss_pred HHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCC--CCCC
Q 025144 61 AVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD--LPFS 138 (257)
Q Consensus 61 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~--~~~~ 138 (257)
+...+. .++.+|||+|||+|..+..+++. +.+++++|+|+.+++.++++. ..+..+|+.+ .+++
T Consensus 25 l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~~~~~~~~~~~~~----------~~~~~~d~~~~~~~~~ 90 (230)
T 3cc8_A 25 LLKHIK-KEWKEVLDIGCSSGALGAAIKEN---GTRVSGIEAFPEAAEQAKEKL----------DHVVLGDIETMDMPYE 90 (230)
T ss_dssp HHTTCC-TTCSEEEEETCTTSHHHHHHHTT---TCEEEEEESSHHHHHHHHTTS----------SEEEESCTTTCCCCSC
T ss_pred HHHHhc-cCCCcEEEeCCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHhC----------CcEEEcchhhcCCCCC
Confidence 344444 56789999999999999999876 379999999999999998764 3678889876 4566
Q ss_pred CCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHHH
Q 025144 139 DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSS 218 (257)
Q Consensus 139 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (257)
+++||+|++..+++|++++..++++++++|+|||.+++..++...... ............. .+ .....
T Consensus 91 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~---~~~~~~~~~~~~~---~~------~~~~~ 158 (230)
T 3cc8_A 91 EEQFDCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASIPNVSHISV---LAPLLAGNWTYTE---YG------LLDKT 158 (230)
T ss_dssp TTCEEEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEECTTSHHH---HHHHHTTCCCCBS---SS------TTBTT
T ss_pred CCccCEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEeCCcchHHH---HHHHhcCCceecc---CC------CCCcc
Confidence 789999999999999999999999999999999999988766543211 1111110000000 00 00011
Q ss_pred HhccCCHHHHHHHHHHcCceeeEEeeec
Q 025144 219 IREFLTGKDLEKLALEIGFSRAKHYELS 246 (257)
Q Consensus 219 ~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 246 (257)
..++++.+++.++++++||++++.....
T Consensus 159 ~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 186 (230)
T 3cc8_A 159 HIRFFTFNEMLRMFLKAGYSISKVDRVY 186 (230)
T ss_dssp CCCCCCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred eEEEecHHHHHHHHHHcCCeEEEEEecc
Confidence 1246799999999999999999877654
No 85
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.82 E-value=5.7e-20 Score=145.89 Aligned_cols=153 Identities=18% Similarity=0.161 Sum_probs=113.2
Q ss_pred CCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhc-------------------------
Q 025144 66 GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKA------------------------- 120 (257)
Q Consensus 66 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~------------------------- 120 (257)
...++.+|||+|||+|..+..+++.. . .+|+++|+|+.+++.+++++...+..
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~-~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACES-F-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEE 130 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGT-E-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhcc-c-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHH
Confidence 34567799999999999998887652 2 48999999999999999887532100
Q ss_pred -cCCCe-eEEEccCCCCCC-CC---CcccEEEeccccc----CcccHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHH
Q 025144 121 -CYKNI-EWVEGDALDLPF-SD---CFFDAITMGYGLR----NVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAI 190 (257)
Q Consensus 121 -~~~~~-~~~~~d~~~~~~-~~---~~~D~v~~~~~l~----~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~ 190 (257)
...++ .+.++|+.+... ++ ++||+|++..+++ +.+++..++++++++|||||.+++.+.......
T Consensus 131 ~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~----- 205 (265)
T 2i62_A 131 KLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYY----- 205 (265)
T ss_dssp HHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEE-----
T ss_pred HhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceE-----
Confidence 00127 899999987642 45 7899999999999 666889999999999999999998875432100
Q ss_pred HHHHHhhhhhhhhccCCchhhhhhhHHHHhccCCHHHHHHHHHHcCceeeEEeeec
Q 025144 191 QEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYELS 246 (257)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 246 (257)
... ... + ....++.+++.++|+++||++++.....
T Consensus 206 ----~~~----------~~~-~------~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 240 (265)
T 2i62_A 206 ----MIG----------EQK-F------SSLPLGWETVRDAVEEAGYTIEQFEVIS 240 (265)
T ss_dssp ----EET----------TEE-E------ECCCCCHHHHHHHHHHTTCEEEEEEEEC
T ss_pred ----EcC----------Ccc-c------cccccCHHHHHHHHHHCCCEEEEEEEec
Confidence 000 000 0 0124588899999999999999887654
No 86
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.82 E-value=3e-19 Score=140.21 Aligned_cols=159 Identities=19% Similarity=0.183 Sum_probs=114.5
Q ss_pred CCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCC-----C
Q 025144 66 GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSD-----C 140 (257)
Q Consensus 66 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-----~ 140 (257)
...++.+|||+|||+|.++..+++.. .+|+++|+|+.+++.++++... .++.++++|+.+++... .
T Consensus 53 ~~~~~~~vLD~GcG~G~~~~~la~~~---~~v~gvD~s~~~~~~a~~~~~~------~~~~~~~~d~~~~~~~~~~~~~~ 123 (245)
T 3ggd_A 53 LFNPELPLIDFACGNGTQTKFLSQFF---PRVIGLDVSKSALEIAAKENTA------ANISYRLLDGLVPEQAAQIHSEI 123 (245)
T ss_dssp TSCTTSCEEEETCTTSHHHHHHHHHS---SCEEEEESCHHHHHHHHHHSCC------TTEEEEECCTTCHHHHHHHHHHH
T ss_pred ccCCCCeEEEEcCCCCHHHHHHHHhC---CCEEEEECCHHHHHHHHHhCcc------cCceEEECccccccccccccccc
Confidence 35677899999999999999999883 3899999999999999988732 48999999998864321 2
Q ss_pred cccEEEecccccCcc--cHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHH-
Q 025144 141 FFDAITMGYGLRNVV--DKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKS- 217 (257)
Q Consensus 141 ~~D~v~~~~~l~~~~--~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 217 (257)
.||+|++..++++++ +...++++++++|||||.+++.++..+............. ....... .....
T Consensus 124 ~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~-~~~~~~~---------~~~~~~ 193 (245)
T 3ggd_A 124 GDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGCIDFFNSLLEKYG-QLPYELL---------LVMEHG 193 (245)
T ss_dssp CSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTHHHHHHHHHHHHS-SCCHHHH---------HHHTTT
T ss_pred CccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccccHHHHHHHhCCC-CCchhhh---------hccccC
Confidence 489999999999998 7899999999999999999999887654322221111100 0000000 00000
Q ss_pred HHhccCCHHHHHHHHHHcCceeeEEeee
Q 025144 218 SIREFLTGKDLEKLALEIGFSRAKHYEL 245 (257)
Q Consensus 218 ~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 245 (257)
.....++.+++.+++ +||++++....
T Consensus 194 ~~~~~~~~~~~~~~~--aGf~~~~~~~~ 219 (245)
T 3ggd_A 194 IRPGIFTAEDIELYF--PDFEILSQGEG 219 (245)
T ss_dssp CCCCCCCHHHHHHHC--TTEEEEEEECC
T ss_pred CCCCccCHHHHHHHh--CCCEEEecccc
Confidence 001245889999999 99999875543
No 87
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.81 E-value=3.4e-19 Score=141.18 Aligned_cols=142 Identities=28% Similarity=0.320 Sum_probs=111.5
Q ss_pred CCchhHHHHhhhhhhhhhhhhhhhhh-hhHHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCCh
Q 025144 26 RCSSERQELFSRIAPVYDNLNDLLSF-GQHRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSK 104 (257)
Q Consensus 26 ~~~~~~~~~y~~~a~~y~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~ 104 (257)
+++..+...|+++++.|+........ .......+.+...+. ++.+|||+|||+|..+..+++. +.+++++|+|+
T Consensus 12 ~~~~~~~~~~~~~a~~Yd~~~~~~~~~~~~~~~~~~l~~~~~--~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~ 86 (260)
T 2avn_A 12 HMKLRSWEFYDRIARAYDSMYETPKWKLYHRLIGSFLEEYLK--NPCRVLDLGGGTGKWSLFLQER---GFEVVLVDPSK 86 (260)
T ss_dssp CEECCHHHHHHHHHHHHGGGGCSHHHHHHHHHHHHHHHHHCC--SCCEEEEETCTTCHHHHHHHTT---TCEEEEEESCH
T ss_pred hhhhhhcchhhHHHHHHHHhccccchhHHHHHHHHHHHHhcC--CCCeEEEeCCCcCHHHHHHHHc---CCeEEEEeCCH
Confidence 45677888999999999887632211 112233344444443 6789999999999999999875 56999999999
Q ss_pred hHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEecccccCc-ccHHHHHHHHHhcccCCCEEEEEeecC
Q 025144 105 NQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGYGLRNV-VDKRKALEESFRVLKPGSRISVLDFNK 181 (257)
Q Consensus 105 ~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~-~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 181 (257)
.+++.++++.. . .++++|+.++++++++||+|++..++.++ +++..++++++++|||||.+++..++.
T Consensus 87 ~~l~~a~~~~~--------~-~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 87 EMLEVAREKGV--------K-NVVEAKAEDLPFPSGAFEAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp HHHHHHHHHTC--------S-CEEECCTTSCCSCTTCEEEEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred HHHHHHHhhcC--------C-CEEECcHHHCCCCCCCEEEEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 99999988752 1 28899999888878899999998876665 789999999999999999999887653
No 88
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.81 E-value=1.7e-19 Score=137.48 Aligned_cols=143 Identities=15% Similarity=0.150 Sum_probs=111.5
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEe
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 147 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 147 (257)
.++ +|||+|||+|..+..+++. +.+++++|+|+.+++.++++....+ .++.+.++|+.+.++++++||+|++
T Consensus 29 ~~~-~vLdiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~~~~~~fD~v~~ 100 (202)
T 2kw5_A 29 PQG-KILCLAEGEGRNACFLASL---GYEVTAVDQSSVGLAKAKQLAQEKG----VKITTVQSNLADFDIVADAWEGIVS 100 (202)
T ss_dssp CSS-EEEECCCSCTHHHHHHHTT---TCEEEEECSSHHHHHHHHHHHHHHT----CCEEEECCBTTTBSCCTTTCSEEEE
T ss_pred CCC-CEEEECCCCCHhHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcC----CceEEEEcChhhcCCCcCCccEEEE
Confidence 456 9999999999999998865 5699999999999999999876543 4789999999988877789999998
Q ss_pred cccccCcccHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHHHHhccCCHHH
Q 025144 148 GYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKD 227 (257)
Q Consensus 148 ~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (257)
.....+.++...+++++.++|||||.+++.++........ .... . ....+++.++
T Consensus 101 ~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~--------------~~~~---~--------~~~~~~~~~~ 155 (202)
T 2kw5_A 101 IFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYN--------------TGGP---K--------DLDLLPKLET 155 (202)
T ss_dssp ECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGT--------------SCCS---S--------SGGGCCCHHH
T ss_pred EhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCC--------------CCCC---C--------cceeecCHHH
Confidence 6432223478899999999999999999988775442110 0000 0 0124679999
Q ss_pred HHHHHHHcCceeeEEeee
Q 025144 228 LEKLALEIGFSRAKHYEL 245 (257)
Q Consensus 228 ~~~~l~~~Gf~~~~~~~~ 245 (257)
+.++++ ||++++....
T Consensus 156 l~~~l~--Gf~v~~~~~~ 171 (202)
T 2kw5_A 156 LQSELP--SLNWLIANNL 171 (202)
T ss_dssp HHHHCS--SSCEEEEEEE
T ss_pred HHHHhc--CceEEEEEEE
Confidence 999998 9999886654
No 89
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.80 E-value=1.6e-18 Score=138.40 Aligned_cols=156 Identities=15% Similarity=0.187 Sum_probs=123.5
Q ss_pred HHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCC
Q 025144 54 HRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDAL 133 (257)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~ 133 (257)
.+.+.+.+...+. .++.+|||+|||+|..+..+++.. +..+++++|+|+.+++.++++....+. .++.++++|..
T Consensus 95 te~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~---~~v~~~~~d~~ 169 (276)
T 2b3t_A 95 TECLVEQALARLP-EQPCRILDLGTGTGAIALALASER-PDCEIIAVDRMPDAVSLAQRNAQHLAI---KNIHILQSDWF 169 (276)
T ss_dssp HHHHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHC-TTSEEEEECSSHHHHHHHHHHHHHHTC---CSEEEECCSTT
T ss_pred HHHHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCC---CceEEEEcchh
Confidence 4455555555555 567799999999999999999875 678999999999999999999866542 47999999998
Q ss_pred CCCCCCCcccEEEecccccCc-------------------------ccHHHHHHHHHhcccCCCEEEEEeecCCCchhHH
Q 025144 134 DLPFSDCFFDAITMGYGLRNV-------------------------VDKRKALEESFRVLKPGSRISVLDFNKSTQPFTT 188 (257)
Q Consensus 134 ~~~~~~~~~D~v~~~~~l~~~-------------------------~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~ 188 (257)
+. +++++||+|+++..+... .....+++.+.+.|+|||.+++...
T Consensus 170 ~~-~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~--------- 239 (276)
T 2b3t_A 170 SA-LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG--------- 239 (276)
T ss_dssp GG-GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECC---------
T ss_pred hh-cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEEC---------
Confidence 73 335789999998544322 2347789999999999999977521
Q ss_pred HHHHHHHhhhhhhhhccCCchhhhhhhHHHHhccCCHHHHHHHHHHcCceeeEEeeecCceeEEEeeeC
Q 025144 189 AIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYELSGGLMGNLVATR 257 (257)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~g~~~~~~~~k 257 (257)
..+.+++.++++++||+.++......|..++++++|
T Consensus 240 ---------------------------------~~~~~~~~~~l~~~Gf~~v~~~~d~~g~~r~~~~~~ 275 (276)
T 2b3t_A 240 ---------------------------------WQQGEAVRQAFILAGYHDVETCRDYGDNERVTLGRY 275 (276)
T ss_dssp ---------------------------------SSCHHHHHHHHHHTTCTTCCEEECTTSSEEEEEEEC
T ss_pred ---------------------------------chHHHHHHHHHHHCCCcEEEEEecCCCCCcEEEEEE
Confidence 224578889999999998888887888888888875
No 90
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.80 E-value=1e-18 Score=134.45 Aligned_cols=108 Identities=18% Similarity=0.153 Sum_probs=92.2
Q ss_pred hhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC---CCCCC
Q 025144 64 WSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL---PFSDC 140 (257)
Q Consensus 64 ~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~ 140 (257)
.+.+.|+.+|||+|||+|..+..+++..++..+|+++|+++.|++.++++.+.. +|+..+..|.... +...+
T Consensus 72 ~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~-----~ni~~V~~d~~~p~~~~~~~~ 146 (233)
T 4df3_A 72 ELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR-----RNIFPILGDARFPEKYRHLVE 146 (233)
T ss_dssp CCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC-----TTEEEEESCTTCGGGGTTTCC
T ss_pred hcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh-----cCeeEEEEeccCccccccccc
Confidence 457899999999999999999999999999999999999999999998887543 5889999988763 35567
Q ss_pred cccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEe
Q 025144 141 FFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 141 ~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
.+|+|++. +.+..+...++.++++.|||||.+++..
T Consensus 147 ~vDvVf~d--~~~~~~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 147 GVDGLYAD--VAQPEQAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp CEEEEEEC--CCCTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEEEEe--ccCChhHHHHHHHHHHhccCCCEEEEEE
Confidence 89999864 3445677889999999999999998865
No 91
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.80 E-value=1.4e-18 Score=136.00 Aligned_cols=103 Identities=15% Similarity=0.108 Sum_probs=87.6
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCC---CCcccE
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFS---DCFFDA 144 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~D~ 144 (257)
.++.+|||+|||+|..+..++.. .++.+|+++|+|+.+++.++++.+..+. .++.++++|+.+++++ +++||+
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~~fD~ 144 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKIC-FPHLHVTIVDSLNKRITFLEKLSEALQL---ENTTFCHDRAETFGQRKDVRESYDI 144 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHH-CTTCEEEEEESCHHHHHHHHHHHHHHTC---SSEEEEESCHHHHTTCTTTTTCEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHHcCC---CCEEEEeccHHHhcccccccCCccE
Confidence 46789999999999999999876 3678999999999999999998866543 4799999999876543 578999
Q ss_pred EEecccccCcccHHHHHHHHHhcccCCCEEEEEe
Q 025144 145 ITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 145 v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
|++.. +.+...+++.+.++|+|||.+++..
T Consensus 145 V~~~~----~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (240)
T 1xdz_A 145 VTARA----VARLSVLSELCLPLVKKNGLFVALK 174 (240)
T ss_dssp EEEEC----CSCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred EEEec----cCCHHHHHHHHHHhcCCCCEEEEEe
Confidence 99866 3678899999999999999998753
No 92
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.80 E-value=1.3e-19 Score=145.86 Aligned_cols=156 Identities=19% Similarity=0.241 Sum_probs=110.0
Q ss_pred CCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhc----------------------------
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKA---------------------------- 120 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~---------------------------- 120 (257)
++.+|||||||+|..+..+++.+ +..+|+|+|+|+.+++.|++++......
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~-~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKW-GPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHT-CCSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 57899999999999999999986 4679999999999999999886543210
Q ss_pred ---------------------------cCCCeeEEEccCCCCC-----CCCCcccEEEecccccCcc------cHHHHHH
Q 025144 121 ---------------------------CYKNIEWVEGDALDLP-----FSDCFFDAITMGYGLRNVV------DKRKALE 162 (257)
Q Consensus 121 ---------------------------~~~~~~~~~~d~~~~~-----~~~~~~D~v~~~~~l~~~~------~~~~~l~ 162 (257)
...++.+.++|+.... +.+++||+|++..+++|+. ++..+++
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~ 204 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFR 204 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHH
Confidence 0037999999998654 4578999999999997774 7889999
Q ss_pred HHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHHHHhccCCHHHHHHHHHH--cCceee
Q 025144 163 ESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALE--IGFSRA 240 (257)
Q Consensus 163 ~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~Gf~~~ 240 (257)
+++++|+|||.|++....+.. ... . ...... .......-.+.++++.++|.+ +||+.+
T Consensus 205 ~~~~~LkpGG~lil~~~~~~~------y~~----~--------~~~~~~--~~~~~~~~~~~p~~~~~~L~~~~~GF~~~ 264 (292)
T 3g07_A 205 RIYRHLRPGGILVLEPQPWSS------YGK----R--------KTLTET--IYKNYYRIQLKPEQFSSYLTSPDVGFSSY 264 (292)
T ss_dssp HHHHHEEEEEEEEEECCCHHH------HHT----T--------TTSCHH--HHHHHHHCCCCGGGHHHHHTSTTTCCCEE
T ss_pred HHHHHhCCCcEEEEecCCchh------hhh----h--------hcccHH--HHhhhhcEEEcHHHHHHHHHhcCCCceEE
Confidence 999999999999875422110 000 0 000000 000011123467899999999 999888
Q ss_pred EEeee
Q 025144 241 KHYEL 245 (257)
Q Consensus 241 ~~~~~ 245 (257)
+....
T Consensus 265 ~~~~~ 269 (292)
T 3g07_A 265 ELVAT 269 (292)
T ss_dssp EEC--
T ss_pred EEecc
Confidence 76654
No 93
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.80 E-value=9.6e-21 Score=147.85 Aligned_cols=145 Identities=14% Similarity=0.140 Sum_probs=109.4
Q ss_pred CCchhHHHHhhhhhhhhhhhhhhhh-------hhhHHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEE
Q 025144 26 RCSSERQELFSRIAPVYDNLNDLLS-------FGQHRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVI 98 (257)
Q Consensus 26 ~~~~~~~~~y~~~a~~y~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~ 98 (257)
...++.+..|+..+..|+....... ..+...+.+.+...+ ..++.+|||||||+|..+..+++. ...+++
T Consensus 11 ~~~e~~~~~w~~~~~~yd~~~~~l~~~g~~vm~~we~~~m~~~a~~~-~~~G~rVLdiG~G~G~~~~~~~~~--~~~~v~ 87 (236)
T 3orh_A 11 APGENCSPAWGAAPAAYDAADTHLRILGKPVMERWETPYMHALAAAA-SSKGGRVLEVGFGMAIAASKVQEA--PIDEHW 87 (236)
T ss_dssp CTTCBCHHHHTTSCEEECTTSSEEEETTEEEEEGGGHHHHHHHHHHH-TTTCEEEEEECCTTSHHHHHHTTS--CEEEEE
T ss_pred CCCchhhhhHhcCcCCCCcchhhhhhcCHHHHHHHHHHHHHHHHHhh-ccCCCeEEEECCCccHHHHHHHHh--CCcEEE
Confidence 3456788899998888887532111 112334444444444 356789999999999999998876 246899
Q ss_pred EEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC--CCCCCcccEEEe-----cccccCcccHHHHHHHHHhcccCC
Q 025144 99 GLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL--PFSDCFFDAITM-----GYGLRNVVDKRKALEESFRVLKPG 171 (257)
Q Consensus 99 ~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~D~v~~-----~~~l~~~~~~~~~l~~~~~~Lk~g 171 (257)
++|+|+.+++.|+++....+ .++.++.+|..+. ++++++||.|+. ...+++..+...++++++++||||
T Consensus 88 ~id~~~~~~~~a~~~~~~~~----~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPG 163 (236)
T 3orh_A 88 IIECNDGVFQRLRDWAPRQT----HKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPG 163 (236)
T ss_dssp EEECCHHHHHHHHHHGGGCS----SEEEEEESCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEE
T ss_pred EEeCCHHHHHHHHHHHhhCC----CceEEEeehHHhhcccccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCC
Confidence 99999999999999876543 5788899887653 467788999975 455667788999999999999999
Q ss_pred CEEEEE
Q 025144 172 SRISVL 177 (257)
Q Consensus 172 G~l~~~ 177 (257)
|+|++.
T Consensus 164 G~l~f~ 169 (236)
T 3orh_A 164 GVLTYC 169 (236)
T ss_dssp EEEEEC
T ss_pred CEEEEE
Confidence 999764
No 94
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.80 E-value=8.2e-18 Score=128.36 Aligned_cols=118 Identities=16% Similarity=0.076 Sum_probs=98.5
Q ss_pred HHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCC
Q 025144 55 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD 134 (257)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 134 (257)
+..+..+...+...++.+|||+|||+|..+..+++. .+..+++++|+|+.+++.++++.+..+. .++.++++|..+
T Consensus 26 ~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~v~~~~~d~~~ 101 (204)
T 3e05_A 26 QEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNL-MPNGRIFALERNPQYLGFIRDNLKKFVA---RNVTLVEAFAPE 101 (204)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHH-CTTSEEEEEECCHHHHHHHHHHHHHHTC---TTEEEEECCTTT
T ss_pred HHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHH-CCCCEEEEEeCCHHHHHHHHHHHHHhCC---CcEEEEeCChhh
Confidence 334455666777888999999999999999999988 4678999999999999999998865542 589999999976
Q ss_pred CCCCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 135 LPFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 135 ~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
.....++||+|++...++ +...+++++.++|||||.+++...
T Consensus 102 ~~~~~~~~D~i~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~ 143 (204)
T 3e05_A 102 GLDDLPDPDRVFIGGSGG---MLEEIIDAVDRRLKSEGVIVLNAV 143 (204)
T ss_dssp TCTTSCCCSEEEESCCTT---CHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred hhhcCCCCCEEEECCCCc---CHHHHHHHHHHhcCCCeEEEEEec
Confidence 543347799999988765 778999999999999999988653
No 95
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.80 E-value=6.7e-20 Score=143.18 Aligned_cols=147 Identities=15% Similarity=0.173 Sum_probs=107.8
Q ss_pred CCchhHHHHhhhhhhhhhhhhhh-------hhhhhHHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEE
Q 025144 26 RCSSERQELFSRIAPVYDNLNDL-------LSFGQHRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVI 98 (257)
Q Consensus 26 ~~~~~~~~~y~~~a~~y~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~ 98 (257)
.+.++....|+..+..|+..... ........+.+.+.... ..++.+|||||||+|..+..+++. ...+|+
T Consensus 11 ~~~~~~~~~~~~~~~~Yd~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~vLDiGcGtG~~~~~l~~~--~~~~v~ 87 (236)
T 1zx0_A 11 APGENCSPAWGAAPAAYDAADTHLRILGKPVMERWETPYMHALAAAA-SSKGGRVLEVGFGMAIAASKVQEA--PIDEHW 87 (236)
T ss_dssp CTTCBCHHHHTTSCEEECTTSCEEEETTEEEEEGGGHHHHHHHHHHH-TTTCEEEEEECCTTSHHHHHHHTS--CEEEEE
T ss_pred CCcCCCchhhhcchhhcCCccchhhccchHHHHHHHHHHHHHHHhhc-CCCCCeEEEEeccCCHHHHHHHhc--CCCeEE
Confidence 45667888999988888843321 01112222333333333 456789999999999999999654 234899
Q ss_pred EEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC--CCCCCcccEEEe-ccccc----CcccHHHHHHHHHhcccCC
Q 025144 99 GLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL--PFSDCFFDAITM-GYGLR----NVVDKRKALEESFRVLKPG 171 (257)
Q Consensus 99 ~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~D~v~~-~~~l~----~~~~~~~~l~~~~~~Lk~g 171 (257)
++|+|+.|++.|+++.+..+ .++.++++|+.++ ++++++||+|++ .+.+. +..+...++++++++||||
T Consensus 88 gvD~s~~~l~~a~~~~~~~~----~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~Lkpg 163 (236)
T 1zx0_A 88 IIECNDGVFQRLRDWAPRQT----HKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPG 163 (236)
T ss_dssp EEECCHHHHHHHHHHGGGCS----SEEEEEESCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEE
T ss_pred EEcCCHHHHHHHHHHHHhcC----CCeEEEecCHHHhhcccCCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCC
Confidence 99999999999999876543 5799999999887 777889999999 55541 1223457799999999999
Q ss_pred CEEEEEee
Q 025144 172 SRISVLDF 179 (257)
Q Consensus 172 G~l~~~~~ 179 (257)
|.+++.+.
T Consensus 164 G~l~~~~~ 171 (236)
T 1zx0_A 164 GVLTYCNL 171 (236)
T ss_dssp EEEEECCH
T ss_pred eEEEEEec
Confidence 99987654
No 96
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.79 E-value=2.5e-18 Score=142.31 Aligned_cols=159 Identities=19% Similarity=0.248 Sum_probs=118.5
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEe
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 147 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 147 (257)
.+..+|||||||+|..+..+++.+ |+.+++++|+ +.+++.+++. +++.++.+|+.+ +++ .||+|++
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~---------~~v~~~~~d~~~-~~~--~~D~v~~ 257 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIF-PHLKCTVFDQ-PQVVGNLTGN---------ENLNFVGGDMFK-SIP--SADAVLL 257 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHC-TTSEEEEEEC-HHHHSSCCCC---------SSEEEEECCTTT-CCC--CCSEEEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEecc-HHHHhhcccC---------CCcEEEeCccCC-CCC--CceEEEE
Confidence 456799999999999999999985 6789999999 7888766541 469999999987 554 4999999
Q ss_pred cccccCcccHH--HHHHHHHhcccC---CCEEEEEeecCCCchhH---HHHHHHHHhhhhhhhhccCCchhhhhhhHHHH
Q 025144 148 GYGLRNVVDKR--KALEESFRVLKP---GSRISVLDFNKSTQPFT---TAIQEWMIDNVVVPVASGYGLAEEYQYLKSSI 219 (257)
Q Consensus 148 ~~~l~~~~~~~--~~l~~~~~~Lk~---gG~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (257)
.+++|++++.. .+|++++++|+| ||.+++.+...+..... ......+.-.+.. ...
T Consensus 258 ~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~----------------~~~ 321 (358)
T 1zg3_A 258 KWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLT----------------MFL 321 (358)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHH----------------HHS
T ss_pred cccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhc----------------cCC
Confidence 99999998866 999999999999 99999988765432211 1111111100000 001
Q ss_pred hccCCHHHHHHHHHHcCceeeEEeeecCceeEEEeeeC
Q 025144 220 REFLTGKDLEKLALEIGFSRAKHYELSGGLMGNLVATR 257 (257)
Q Consensus 220 ~~~~~~~~~~~~l~~~Gf~~~~~~~~~~g~~~~~~~~k 257 (257)
...++.++|.++|+++||++++.... .+...++.+++
T Consensus 322 g~~~t~~e~~~ll~~aGf~~~~~~~~-~~~~~vie~~~ 358 (358)
T 1zg3_A 322 GKERTKQEWEKLIYDAGFSSYKITPI-SGFKSLIEVYP 358 (358)
T ss_dssp CCCEEHHHHHHHHHHTTCCEEEEEEE-TTTEEEEEEEC
T ss_pred CCCCCHHHHHHHHHHcCCCeeEEEec-CCCcEEEEEeC
Confidence 13568999999999999999998885 55566776654
No 97
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.79 E-value=5.9e-18 Score=134.12 Aligned_cols=108 Identities=14% Similarity=0.182 Sum_probs=91.5
Q ss_pred hhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcc
Q 025144 63 SWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFF 142 (257)
Q Consensus 63 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 142 (257)
.+..+.++.+|||||||+|.++..++.+. ++.+|+++|+|++|++.|+++++..+. .+++++++|+.+++ +++|
T Consensus 116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~-~ga~V~gIDis~~~l~~Ar~~~~~~gl---~~v~~v~gDa~~l~--d~~F 189 (298)
T 3fpf_A 116 ALGRFRRGERAVFIGGGPLPLTGILLSHV-YGMRVNVVEIEPDIAELSRKVIEGLGV---DGVNVITGDETVID--GLEF 189 (298)
T ss_dssp HHTTCCTTCEEEEECCCSSCHHHHHHHHT-TCCEEEEEESSHHHHHHHHHHHHHHTC---CSEEEEESCGGGGG--GCCC
T ss_pred HHcCCCCcCEEEEECCCccHHHHHHHHHc-cCCEEEEEECCHHHHHHHHHHHHhcCC---CCeEEEECchhhCC--CCCc
Confidence 46788999999999999998775555443 578999999999999999999876543 58999999998865 6889
Q ss_pred cEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 143 DAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 143 D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
|+|++... .++...+++++.++|||||.+++.+.
T Consensus 190 DvV~~~a~---~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 190 DVLMVAAL---AEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp SEEEECTT---CSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred CEEEECCC---ccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 99998654 57889999999999999999988763
No 98
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.78 E-value=3.8e-18 Score=131.04 Aligned_cols=116 Identities=23% Similarity=0.344 Sum_probs=95.7
Q ss_pred HHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC
Q 025144 57 WKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP 136 (257)
Q Consensus 57 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~ 136 (257)
+...+...+ .++.+|||+|||+|..+..+++. ++ .+++++|+|+.+++.++++.... +++.+.++|+.+++
T Consensus 32 ~~~~l~~~~--~~~~~vLdiGcG~G~~~~~l~~~-~~-~~v~~~D~s~~~~~~a~~~~~~~-----~~i~~~~~d~~~~~ 102 (215)
T 2pxx_A 32 FRALLEPEL--RPEDRILVLGCGNSALSYELFLG-GF-PNVTSVDYSSVVVAAMQACYAHV-----PQLRWETMDVRKLD 102 (215)
T ss_dssp HHHHHGGGC--CTTCCEEEETCTTCSHHHHHHHT-TC-CCEEEEESCHHHHHHHHHHTTTC-----TTCEEEECCTTSCC
T ss_pred HHHHHHHhc--CCCCeEEEECCCCcHHHHHHHHc-CC-CcEEEEeCCHHHHHHHHHhcccC-----CCcEEEEcchhcCC
Confidence 444444433 56789999999999999999887 33 28999999999999999887531 58999999999888
Q ss_pred CCCCcccEEEecccccCcc---------------cHHHHHHHHHhcccCCCEEEEEeecC
Q 025144 137 FSDCFFDAITMGYGLRNVV---------------DKRKALEESFRVLKPGSRISVLDFNK 181 (257)
Q Consensus 137 ~~~~~~D~v~~~~~l~~~~---------------~~~~~l~~~~~~Lk~gG~l~~~~~~~ 181 (257)
+++++||+|++..+++++. +...+++++.++|||||.+++.++..
T Consensus 103 ~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 103 FPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp SCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 7788999999988876543 56889999999999999999887653
No 99
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.78 E-value=6.6e-18 Score=131.31 Aligned_cols=150 Identities=14% Similarity=0.093 Sum_probs=108.4
Q ss_pred hhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCC----CCCC
Q 025144 63 SWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD----LPFS 138 (257)
Q Consensus 63 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~----~~~~ 138 (257)
..+...++.+|||+|||+|..+..+++.++ ..+|+++|+|+.+++.++++.+.. .++.++.+|+.+ .+++
T Consensus 68 ~~~~~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~-----~~v~~~~~d~~~~~~~~~~~ 141 (230)
T 1fbn_A 68 KVMPIKRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAER-----ENIIPILGDANKPQEYANIV 141 (230)
T ss_dssp CCCCCCTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTC-----TTEEEEECCTTCGGGGTTTS
T ss_pred cccCCCCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcC-----CCeEEEECCCCCcccccccC
Confidence 334566788999999999999999999863 579999999999999999886543 589999999987 5655
Q ss_pred CCcccEEEecccccCcccH---HHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhh
Q 025144 139 DCFFDAITMGYGLRNVVDK---RKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYL 215 (257)
Q Consensus 139 ~~~~D~v~~~~~l~~~~~~---~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (257)
++||+|+ ++++++ ..+++++.++|||||.+++. +............
T Consensus 142 -~~~D~v~-----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~-~~~~~~~~~~~~~------------------------ 190 (230)
T 1fbn_A 142 -EKVDVIY-----EDVAQPNQAEILIKNAKWFLKKGGYGMIA-IKARSIDVTKDPK------------------------ 190 (230)
T ss_dssp -CCEEEEE-----ECCCSTTHHHHHHHHHHHHEEEEEEEEEE-EEGGGTCSSSCHH------------------------
T ss_pred -ccEEEEE-----EecCChhHHHHHHHHHHHhCCCCcEEEEE-EecCCCCCCCCHH------------------------
Confidence 7899998 344444 77899999999999999886 2211000000000
Q ss_pred HHHHhccCCHHHHHHHHHHcCceeeEEeeecCc--eeEEEeee
Q 025144 216 KSSIREFLTGKDLEKLALEIGFSRAKHYELSGG--LMGNLVAT 256 (257)
Q Consensus 216 ~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~g--~~~~~~~~ 256 (257)
....+++. +|+++||++++......- ...+++++
T Consensus 191 ------~~~~~~l~-~l~~~Gf~~~~~~~~~~~~~~~~~v~~~ 226 (230)
T 1fbn_A 191 ------EIFKEQKE-ILEAGGFKIVDEVDIEPFEKDHVMFVGI 226 (230)
T ss_dssp ------HHHHHHHH-HHHHHTEEEEEEEECTTTSTTEEEEEEE
T ss_pred ------HhhHHHHH-HHHHCCCEEEEEEccCCCccceEEEEEE
Confidence 00126777 889999999988776432 24444544
No 100
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.78 E-value=4.5e-18 Score=133.54 Aligned_cols=136 Identities=13% Similarity=0.067 Sum_probs=102.2
Q ss_pred hhHHHHhhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHH
Q 025144 29 SERQELFSRIAPVYDNLNDLLSFGQHRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLS 108 (257)
Q Consensus 29 ~~~~~~y~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~ 108 (257)
+..++.||..+..|........ ...+.+.+...+...++.+|||+|||+|.++..+++. +.+|+++|+|+.|++
T Consensus 8 ~s~a~~wd~~a~~f~~~~~~~~---~~~~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~---g~~V~gvD~S~~ml~ 81 (261)
T 3iv6_A 8 NSKAEAWELIGNQFWTIGRVAA---RPSDRENDIFLENIVPGSTVAVIGASTRFLIEKALER---GASVTVFDFSQRMCD 81 (261)
T ss_dssp CTTHHHHHTTTTHHHHTSCGGG---SCCHHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHT---TCEEEEEESCHHHHH
T ss_pred hhhhhHHHHHHHHHHHHhhccc---cHHHHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhc---CCEEEEEECCHHHHH
Confidence 3456788888877766543211 1234556667778888999999999999999999976 579999999999999
Q ss_pred HHHhhhhhhhhccCCCeeEEEccCCCCCC-----CCCcccEEEecccccCcc--cHHHHHHHHHhcccCCCEEEEEeec
Q 025144 109 MASSRQDLVSKACYKNIEWVEGDALDLPF-----SDCFFDAITMGYGLRNVV--DKRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 109 ~a~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~~~D~v~~~~~l~~~~--~~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
.++++.... .++.+..+.+. .+++||+|+++.+++|+. +....++++.++| |||.+++....
T Consensus 82 ~Ar~~~~~~---------~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 82 DLAEALADR---------CVTIDLLDITAEIPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp HHHHHTSSS---------CCEEEECCTTSCCCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred HHHHHHHhc---------cceeeeeecccccccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 999987431 22333333222 246899999999999874 5677999999999 99999887543
No 101
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.78 E-value=4.7e-18 Score=129.94 Aligned_cols=101 Identities=20% Similarity=0.204 Sum_probs=85.9
Q ss_pred CCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEec
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMG 148 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 148 (257)
++.+|||+|||+|..+..+++.. ++.+++++|+|+.+++.++++....+. .++.+.++|+.+.+ +.++||+|++.
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~v~~~~~d~~~~~-~~~~~D~i~~~ 139 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVR-PEAHFTLLDSLGKRVRFLRQVQHELKL---ENIEPVQSRVEEFP-SEPPFDGVISR 139 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTC---SSEEEEECCTTTSC-CCSCEEEEECS
T ss_pred CCCeEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCC---CCeEEEecchhhCC-ccCCcCEEEEe
Confidence 46799999999999999999885 678999999999999999998765442 46999999998865 45789999975
Q ss_pred ccccCcccHHHHHHHHHhcccCCCEEEEEe
Q 025144 149 YGLRNVVDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 149 ~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
. +.+...+++.+.++|+|||.+++..
T Consensus 140 ~----~~~~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 140 A----FASLNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp C----SSSHHHHHHHHTTSEEEEEEEEEEE
T ss_pred c----cCCHHHHHHHHHHhcCCCcEEEEEe
Confidence 4 3567899999999999999998763
No 102
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.77 E-value=1.1e-18 Score=140.10 Aligned_cols=140 Identities=14% Similarity=0.071 Sum_probs=109.7
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEe
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 147 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 147 (257)
.++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.++++....+ .++.++++|+.+.+. +++||+|++
T Consensus 119 ~~~~~vLD~GcG~G~~~~~l~~~---g~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~~-~~~fD~i~~ 190 (286)
T 3m70_A 119 ISPCKVLDLGCGQGRNSLYLSLL---GYDVTSWDHNENSIAFLNETKEKEN----LNISTALYDINAANI-QENYDFIVS 190 (286)
T ss_dssp SCSCEEEEESCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTT----CCEEEEECCGGGCCC-CSCEEEEEE
T ss_pred cCCCcEEEECCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHHcC----CceEEEEeccccccc-cCCccEEEE
Confidence 36789999999999999999887 5699999999999999999886543 389999999998776 688999999
Q ss_pred cccccCcc--cHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHHHHhccCCH
Q 025144 148 GYGLRNVV--DKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTG 225 (257)
Q Consensus 148 ~~~l~~~~--~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (257)
..++++++ +...+++++.++|+|||.+++............ . .....++.
T Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~---------------~-------------~~~~~~~~ 242 (286)
T 3m70_A 191 TVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCP---------------L-------------PFSFTFAE 242 (286)
T ss_dssp CSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCS---------------S-------------CCSCCBCT
T ss_pred ccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCC---------------C-------------CccccCCH
Confidence 99999985 467999999999999999877654432211100 0 00124577
Q ss_pred HHHHHHHHHcCceeeEEeee
Q 025144 226 KDLEKLALEIGFSRAKHYEL 245 (257)
Q Consensus 226 ~~~~~~l~~~Gf~~~~~~~~ 245 (257)
.++.+++. +|+++...+.
T Consensus 243 ~~l~~~~~--~~~~~~~~~~ 260 (286)
T 3m70_A 243 NELKEYYK--DWEFLEYNEN 260 (286)
T ss_dssp THHHHHTT--TSEEEEEECC
T ss_pred HHHHHHhc--CCEEEEEEcc
Confidence 88988885 4888876543
No 103
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.77 E-value=5e-19 Score=135.93 Aligned_cols=157 Identities=17% Similarity=0.213 Sum_probs=103.8
Q ss_pred HHHHHHHHHhhhCC-CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccC
Q 025144 54 HRIWKRMAVSWSGA-KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDA 132 (257)
Q Consensus 54 ~~~~~~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~ 132 (257)
.+.+.+.+...+.. .++.+|||+|||+|..+..+++.. ++.+++++|+|+.+++.+++++...+ .++.++++|+
T Consensus 14 ~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~~~~~d~ 88 (215)
T 4dzr_A 14 TEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALAC-PGVSVTAVDLSMDALAVARRNAERFG----AVVDWAAADG 88 (215)
T ss_dssp HHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHC-TTEEEEEEECC-----------------------CCHHHH
T ss_pred HHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhC----CceEEEEcch
Confidence 34455555555554 678899999999999999999984 67799999999999999998876543 2678888888
Q ss_pred CCCCCCC-----CcccEEEecccccCcccH--------------------------HHHHHHHHhcccCCCEEEEEeecC
Q 025144 133 LDLPFSD-----CFFDAITMGYGLRNVVDK--------------------------RKALEESFRVLKPGSRISVLDFNK 181 (257)
Q Consensus 133 ~~~~~~~-----~~~D~v~~~~~l~~~~~~--------------------------~~~l~~~~~~Lk~gG~l~~~~~~~ 181 (257)
.+ ++++ ++||+|+++..++...+. ..+++++.++|||||.+++.....
T Consensus 89 ~~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 167 (215)
T 4dzr_A 89 IE-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGH 167 (215)
T ss_dssp HH-HHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTT
T ss_pred Hh-hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECC
Confidence 76 4443 889999997665443221 678899999999999955554321
Q ss_pred CCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHHHHhccCCHHHHHHHHH--HcCceeeEEeeecCceeEEEeeeC
Q 025144 182 STQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLAL--EIGFSRAKHYELSGGLMGNLVATR 257 (257)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~Gf~~~~~~~~~~g~~~~~~~~k 257 (257)
...+++.++++ ++||..++......|..++++++|
T Consensus 168 -----------------------------------------~~~~~~~~~l~~~~~gf~~~~~~~~~~~~~r~~~~~~ 204 (215)
T 4dzr_A 168 -----------------------------------------NQADEVARLFAPWRERGFRVRKVKDLRGIDRVIAVTR 204 (215)
T ss_dssp -----------------------------------------SCHHHHHHHTGGGGGGTEECCEEECTTSCEEEEEEEE
T ss_pred -----------------------------------------ccHHHHHHHHHHhhcCCceEEEEEecCCCEEEEEEEE
Confidence 13467788888 999998888887777777777653
No 104
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.77 E-value=1.1e-17 Score=127.70 Aligned_cols=135 Identities=18% Similarity=0.119 Sum_probs=107.8
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEE
Q 025144 67 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAIT 146 (257)
Q Consensus 67 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 146 (257)
..++.+|||+|||+|..+..+++. +..+++++|+|+.+++.++++....+. .++.+.++|+.+.. +++||+|+
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~v~~~~~d~~~~~--~~~fD~i~ 130 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKL--GAKSVLATDISDESMTAAEENAALNGI---YDIALQKTSLLADV--DGKFDLIV 130 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTC---CCCEEEESSTTTTC--CSCEEEEE
T ss_pred ccCCCEEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCC---CceEEEeccccccC--CCCceEEE
Confidence 456789999999999999998875 356999999999999999998865442 34999999997743 58899999
Q ss_pred ecccccCcccHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHHHHhccCCHH
Q 025144 147 MGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGK 226 (257)
Q Consensus 147 ~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (257)
++..+++ ...+++++.++|+|||.+++.++... +.+
T Consensus 131 ~~~~~~~---~~~~l~~~~~~L~~gG~l~~~~~~~~-----------------------------------------~~~ 166 (205)
T 3grz_A 131 ANILAEI---LLDLIPQLDSHLNEDGQVIFSGIDYL-----------------------------------------QLP 166 (205)
T ss_dssp EESCHHH---HHHHGGGSGGGEEEEEEEEEEEEEGG-----------------------------------------GHH
T ss_pred ECCcHHH---HHHHHHHHHHhcCCCCEEEEEecCcc-----------------------------------------cHH
Confidence 9887664 47889999999999999988654421 346
Q ss_pred HHHHHHHHcCceeeEEeeecCceeEEE
Q 025144 227 DLEKLALEIGFSRAKHYELSGGLMGNL 253 (257)
Q Consensus 227 ~~~~~l~~~Gf~~~~~~~~~~g~~~~~ 253 (257)
++.++++++||++++.... .+...++
T Consensus 167 ~~~~~~~~~Gf~~~~~~~~-~~w~~~~ 192 (205)
T 3grz_A 167 KIEQALAENSFQIDLKMRA-GRWIGLA 192 (205)
T ss_dssp HHHHHHHHTTEEEEEEEEE-TTEEEEE
T ss_pred HHHHHHHHcCCceEEeecc-CCEEEEE
Confidence 7889999999999887665 3344443
No 105
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.77 E-value=1.1e-17 Score=131.37 Aligned_cols=171 Identities=12% Similarity=0.022 Sum_probs=118.7
Q ss_pred chhHHHHhhhhhhhhhhhhhhhhhhhHHHHHHHHHhhh------CCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEe
Q 025144 28 SSERQELFSRIAPVYDNLNDLLSFGQHRIWKRMAVSWS------GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLD 101 (257)
Q Consensus 28 ~~~~~~~y~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D 101 (257)
.+....+++.+.......+-....+..+.|.+.+...+ ...++.+|||||||+|..+..++... +..+|+++|
T Consensus 33 ~~~~~~~~~~l~~~~~~~nl~~i~~~~~~~~~~~~ds~~~l~~~~~~~~~~vLDiG~G~G~~~i~la~~~-~~~~v~~vD 111 (249)
T 3g89_A 33 LEAFSRLYALLQEASGKVNLTALRGEEEVVVKHFLDSLTLLRLPLWQGPLRVLDLGTGAGFPGLPLKIVR-PELELVLVD 111 (249)
T ss_dssp HHHHHHHHHHHHHC----------CHHHHHHHHHHHHHGGGGSSCCCSSCEEEEETCTTTTTHHHHHHHC-TTCEEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCCceECCHHHHhhceeeechhhhcccccCCCCEEEEEcCCCCHHHHHHHHHC-CCCEEEEEE
Confidence 44555566655544443332222334555555444322 23467899999999999999999884 678999999
Q ss_pred CChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCC---CCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEe
Q 025144 102 FSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFS---DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 102 ~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
+|+.+++.++++....+. .++.++++|+++++.. .++||+|++..+ .+...+++.+.++|||||.+++..
T Consensus 112 ~s~~~~~~a~~~~~~~~l---~~v~~~~~d~~~~~~~~~~~~~fD~I~s~a~----~~~~~ll~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 112 ATRKKVAFVERAIEVLGL---KGARALWGRAEVLAREAGHREAYARAVARAV----APLCVLSELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp SCHHHHHHHHHHHHHHTC---SSEEEEECCHHHHTTSTTTTTCEEEEEEESS----CCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhCC---CceEEEECcHHHhhcccccCCCceEEEECCc----CCHHHHHHHHHHHcCCCeEEEEEe
Confidence 999999999999876553 4799999999876532 478999998653 467889999999999999998764
Q ss_pred ecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHHHHhccCCHHHHHHHHHHcCceeeEEeee
Q 025144 179 FNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYEL 245 (257)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 245 (257)
-.... . ...++.+.++..||++.+...+
T Consensus 185 g~~~~----~-----------------------------------e~~~~~~~l~~~G~~~~~~~~~ 212 (249)
T 3g89_A 185 GPRVE----E-----------------------------------ELAPLPPALERLGGRLGEVLAL 212 (249)
T ss_dssp CSCCH----H-----------------------------------HHTTHHHHHHHHTEEEEEEEEE
T ss_pred CCCcH----H-----------------------------------HHHHHHHHHHHcCCeEEEEEEe
Confidence 22110 0 1245667788899998887765
No 106
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.77 E-value=1.2e-17 Score=123.75 Aligned_cols=129 Identities=14% Similarity=0.082 Sum_probs=105.4
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEe
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 147 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 147 (257)
.++.+|||+|||+|.++..+++. . +++++|+|+.|++. . .++.++++|+.+ ++++++||+|++
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~---~-~v~gvD~s~~~~~~----~--------~~~~~~~~d~~~-~~~~~~fD~i~~ 84 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKR---N-TVVSTDLNIRALES----H--------RGGNLVRADLLC-SINQESVDVVVF 84 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTT---S-EEEEEESCHHHHHT----C--------SSSCEEECSTTT-TBCGGGCSEEEE
T ss_pred CCCCeEEEeccCccHHHHHHHhc---C-cEEEEECCHHHHhc----c--------cCCeEEECChhh-hcccCCCCEEEE
Confidence 45669999999999999999876 3 99999999999987 1 689999999988 555689999999
Q ss_pred cccccCcccH---------HHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHHH
Q 025144 148 GYGLRNVVDK---------RKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSS 218 (257)
Q Consensus 148 ~~~l~~~~~~---------~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (257)
+..+++.++. ...++++.+.+ |||.+++.....
T Consensus 85 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~------------------------------------- 126 (170)
T 3q87_B 85 NPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA------------------------------------- 126 (170)
T ss_dssp CCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG-------------------------------------
T ss_pred CCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC-------------------------------------
Confidence 9888865443 67888888888 999998876332
Q ss_pred HhccCCHHHHHHHHHHcCceeeEEeeecCceeEEEee
Q 025144 219 IREFLTGKDLEKLALEIGFSRAKHYELSGGLMGNLVA 255 (257)
Q Consensus 219 ~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~g~~~~~~~ 255 (257)
.+.+++.++++++||+.........+.-.++..
T Consensus 127 ----~~~~~l~~~l~~~gf~~~~~~~~~~~~e~~~~~ 159 (170)
T 3q87_B 127 ----NRPKEVLARLEERGYGTRILKVRKILGETVYII 159 (170)
T ss_dssp ----GCHHHHHHHHHHTTCEEEEEEEEECSSSEEEEE
T ss_pred ----CCHHHHHHHHHHCCCcEEEEEeeccCCceEEEE
Confidence 245788899999999999888877776666554
No 107
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.76 E-value=1e-18 Score=135.52 Aligned_cols=119 Identities=16% Similarity=0.212 Sum_probs=98.0
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccC-CCCCCC-CCcccEE
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDA-LDLPFS-DCFFDAI 145 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~-~~~~~~-~~~~D~v 145 (257)
.++.+|||+|||+|..+..+++. +.+|+++|+|+.+++.++++. +++.++++|+ ..++++ +++||+|
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~~~~~~~fD~v 115 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ---AARWAAYDFSPELLKLARANA--------PHADVYEWNGKGELPAGLGAPFGLI 115 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHC--------TTSEEEECCSCSSCCTTCCCCEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHhC--------CCceEEEcchhhccCCcCCCCEEEE
Confidence 56789999999999999999876 569999999999999999883 6899999999 456666 7899999
Q ss_pred EecccccCcccHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHHHHhccCCH
Q 025144 146 TMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTG 225 (257)
Q Consensus 146 ~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (257)
++. .++..++++++++|||||.++... ...+.
T Consensus 116 ~~~------~~~~~~l~~~~~~LkpgG~l~~~~------------------------------------------~~~~~ 147 (226)
T 3m33_A 116 VSR------RGPTSVILRLPELAAPDAHFLYVG------------------------------------------PRLNV 147 (226)
T ss_dssp EEE------SCCSGGGGGHHHHEEEEEEEEEEE------------------------------------------SSSCC
T ss_pred EeC------CCHHHHHHHHHHHcCCCcEEEEeC------------------------------------------CcCCH
Confidence 987 366788999999999999997110 12355
Q ss_pred HHHHHHHHHcCceeeEEeee
Q 025144 226 KDLEKLALEIGFSRAKHYEL 245 (257)
Q Consensus 226 ~~~~~~l~~~Gf~~~~~~~~ 245 (257)
+++.+.++++||++......
T Consensus 148 ~~~~~~l~~~Gf~~~~~~~~ 167 (226)
T 3m33_A 148 PEVPERLAAVGWDIVAEDHV 167 (226)
T ss_dssp THHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHCCCeEEEEEee
Confidence 67888999999987765543
No 108
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.76 E-value=8.3e-18 Score=125.41 Aligned_cols=119 Identities=18% Similarity=0.187 Sum_probs=95.2
Q ss_pred HHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCC
Q 025144 54 HRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDAL 133 (257)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~ 133 (257)
.+.++..+...+...++.+|||+|||+|..+..+++.+ +..+++++|+|+.+++.+++++...+.. .++ ++.+|..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~--~~~-~~~~d~~ 85 (178)
T 3hm2_A 10 KQHVRALAISALAPKPHETLWDIGGGSGSIAIEWLRST-PQTTAVCFEISEERRERILSNAINLGVS--DRI-AVQQGAP 85 (178)
T ss_dssp HHHHHHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTS-SSEEEEEECSCHHHHHHHHHHHHTTTCT--TSE-EEECCTT
T ss_pred HHHHHHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHHHHhCCC--CCE-EEecchH
Confidence 34455666777778888899999999999999999875 6789999999999999999988655432 377 8888875
Q ss_pred C-CCCCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeec
Q 025144 134 D-LPFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 134 ~-~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
+ ++..+++||+|++..++++ ..+++++.++|||||.+++.+..
T Consensus 86 ~~~~~~~~~~D~i~~~~~~~~----~~~l~~~~~~L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 86 RAFDDVPDNPDVIFIGGGLTA----PGVFAAAWKRLPVGGRLVANAVT 129 (178)
T ss_dssp GGGGGCCSCCSEEEECC-TTC----TTHHHHHHHTCCTTCEEEEEECS
T ss_pred hhhhccCCCCCEEEECCcccH----HHHHHHHHHhcCCCCEEEEEeec
Confidence 4 2222278999999998887 67899999999999999887643
No 109
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.76 E-value=4.9e-17 Score=126.32 Aligned_cols=133 Identities=17% Similarity=0.210 Sum_probs=103.7
Q ss_pred CCCCCCeEEEecCC-CChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC-CCCCCccc
Q 025144 66 GAKTGDNVLDVCCG-SGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-PFSDCFFD 143 (257)
Q Consensus 66 ~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~D 143 (257)
...++.+|||+||| +|.++..+++.. ..+|+++|+|+.+++.+++++...+ .++.++++|...+ ++++++||
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~----~~v~~~~~d~~~~~~~~~~~fD 125 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNN----SNVRLVKSNGGIIKGVVEGTFD 125 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTT----CCCEEEECSSCSSTTTCCSCEE
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhC----CCcEEEeCCchhhhhcccCcee
Confidence 45678899999999 999999999884 5799999999999999999886654 3799999997543 34568999
Q ss_pred EEEecccccCccc-------------------HHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhc
Q 025144 144 AITMGYGLRNVVD-------------------KRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVAS 204 (257)
Q Consensus 144 ~v~~~~~l~~~~~-------------------~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (257)
+|+++..+++..+ ...+++.+.++|||||.+++......
T Consensus 126 ~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---------------------- 183 (230)
T 3evz_A 126 VIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE---------------------- 183 (230)
T ss_dssp EEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH----------------------
T ss_pred EEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH----------------------
Confidence 9999877655432 47889999999999999988643321
Q ss_pred cCCchhhhhhhHHHHhccCCHHHHHHHHHHcCceeeEEee
Q 025144 205 GYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYE 244 (257)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 244 (257)
....++.+.++++||++.....
T Consensus 184 ------------------~~~~~~~~~l~~~g~~~~~~~~ 205 (230)
T 3evz_A 184 ------------------KLLNVIKERGIKLGYSVKDIKF 205 (230)
T ss_dssp ------------------HHHHHHHHHHHHTTCEEEEEEE
T ss_pred ------------------hHHHHHHHHHHHcCCceEEEEe
Confidence 0236788899999997665543
No 110
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.76 E-value=4e-17 Score=124.49 Aligned_cols=114 Identities=18% Similarity=0.235 Sum_probs=93.1
Q ss_pred HHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC
Q 025144 56 IWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL 135 (257)
Q Consensus 56 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 135 (257)
..+..+...+...++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.|+++.+..+.. .++.++++|+.+.
T Consensus 42 ~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g~~--~~v~~~~~d~~~~ 116 (204)
T 3njr_A 42 PMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYGLS--PRMRAVQGTAPAA 116 (204)
T ss_dssp HHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCT--TTEEEEESCTTGG
T ss_pred HHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCC--CCEEEEeCchhhh
Confidence 34455666777888899999999999999999887 579999999999999999988665432 3799999999883
Q ss_pred CCCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 136 PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 136 ~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
....+.||+|++...+ +.. +++++.++|||||.+++...
T Consensus 117 ~~~~~~~D~v~~~~~~----~~~-~l~~~~~~LkpgG~lv~~~~ 155 (204)
T 3njr_A 117 LADLPLPEAVFIGGGG----SQA-LYDRLWEWLAPGTRIVANAV 155 (204)
T ss_dssp GTTSCCCSEEEECSCC----CHH-HHHHHHHHSCTTCEEEEEEC
T ss_pred cccCCCCCEEEECCcc----cHH-HHHHHHHhcCCCcEEEEEec
Confidence 3233579999987744 455 99999999999999988654
No 111
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.76 E-value=9.2e-18 Score=129.39 Aligned_cols=112 Identities=21% Similarity=0.235 Sum_probs=85.6
Q ss_pred hCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhh-hhhccCCCeeEEEccCCCCCCCCCccc
Q 025144 65 SGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDL-VSKACYKNIEWVEGDALDLPFSDCFFD 143 (257)
Q Consensus 65 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~D 143 (257)
+...++.+|||+|||+|..+..+++.. |+.+|+++|+|+.|++.+.++... ......+++.++++|+.+++++++. |
T Consensus 23 l~~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d 100 (218)
T 3mq2_A 23 LRSQYDDVVLDVGTGDGKHPYKVARQN-PSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-G 100 (218)
T ss_dssp HHTTSSEEEEEESCTTCHHHHHHHHHC-TTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-E
T ss_pred hhccCCCEEEEecCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-C
Confidence 335678899999999999999999984 678999999999998864332211 1111125899999999998877666 7
Q ss_pred EEEeccc---c--cCcccHHHHHHHHHhcccCCCEEEEEe
Q 025144 144 AITMGYG---L--RNVVDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 144 ~v~~~~~---l--~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
.|++... + ++++++..++++++++|||||.+++..
T Consensus 101 ~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 101 ELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp EEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEe
Confidence 7774332 2 255677899999999999999998743
No 112
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.76 E-value=6.2e-18 Score=127.68 Aligned_cols=119 Identities=21% Similarity=0.266 Sum_probs=98.6
Q ss_pred HHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCC--eeEEEccCC
Q 025144 56 IWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKN--IEWVEGDAL 133 (257)
Q Consensus 56 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~--~~~~~~d~~ 133 (257)
...+.+...+...++.+|||+|||+|..+..+++. +.+++++|+++.+++.++++....+. .+ +.++.+|+.
T Consensus 39 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~---~~~~~~~~~~d~~ 112 (194)
T 1dus_A 39 KGTKILVENVVVDKDDDILDLGCGYGVIGIALADE---VKSTTMADINRRAIKLAKENIKLNNL---DNYDIRVVHSDLY 112 (194)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTTC---TTSCEEEEECSTT
T ss_pred hHHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHcCC---CccceEEEECchh
Confidence 34555666677778889999999999999999876 57999999999999999998865432 34 999999998
Q ss_pred CCCCCCCcccEEEecccccC-cccHHHHHHHHHhcccCCCEEEEEeecC
Q 025144 134 DLPFSDCFFDAITMGYGLRN-VVDKRKALEESFRVLKPGSRISVLDFNK 181 (257)
Q Consensus 134 ~~~~~~~~~D~v~~~~~l~~-~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 181 (257)
+. .++++||+|+++..+++ ..+...+++++.++|+|||.+++.....
T Consensus 113 ~~-~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 113 EN-VKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp TT-CTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred cc-cccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 73 44678999999988887 4567899999999999999999887553
No 113
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.75 E-value=9.3e-18 Score=139.52 Aligned_cols=146 Identities=18% Similarity=0.143 Sum_probs=113.1
Q ss_pred CchhHHHHhhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhH
Q 025144 27 CSSERQELFSRIAPVYDNLNDLLSFGQHRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQ 106 (257)
Q Consensus 27 ~~~~~~~~y~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~ 106 (257)
.......+|+.++..|+.............+.+.+.......++.+|||+|||+|.++..+++. + ..+|+++|+| .|
T Consensus 21 ~~~~~~~yf~~ya~~~~~~~~l~d~~r~~~~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~-g-~~~V~gvD~s-~~ 97 (376)
T 3r0q_C 21 KEVDYAQYFCTYSFLYHQKDMLSDRVRMDAYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQA-G-ARKVYAVEAT-KM 97 (376)
T ss_dssp -------CTTGGGCHHHHHHHHTCHHHHHHHHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHT-T-CSEEEEEESS-TT
T ss_pred ccccHHHHHHHHHHhHHHHHHhcChHHHHHHHHHHHhccccCCCCEEEEeccCcCHHHHHHHhc-C-CCEEEEEccH-HH
Confidence 4456677889999888775444444556777777777777788899999999999999999887 2 3499999999 99
Q ss_pred HHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEecccccCc---ccHHHHHHHHHhcccCCCEEEEEe
Q 025144 107 LSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGYGLRNV---VDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 107 ~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~---~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
++.++++++..+.. .++.++++|+.+++++ ++||+|++..+.+.+ .++..+++.+.++|||||.+++..
T Consensus 98 ~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~-~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 98 ADHARALVKANNLD--HIVEVIEGSVEDISLP-EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp HHHHHHHHHHTTCT--TTEEEEESCGGGCCCS-SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred HHHHHHHHHHcCCC--CeEEEEECchhhcCcC-CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 99999988765433 4699999999998776 889999996655544 458889999999999999997643
No 114
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.75 E-value=4.6e-17 Score=125.13 Aligned_cols=107 Identities=22% Similarity=0.223 Sum_probs=89.7
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC--CCCCcccEE
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP--FSDCFFDAI 145 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~D~v 145 (257)
.++.+|||+|||+|.++..+++.. |+.+++++|+|+.+++.|+++....+. .++.++++|+.+++ +++++||+|
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~a~~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~~D~i 115 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQN-PDINYIGIDIQKSVLSYALDKVLEVGV---PNIKLLWVDGSDLTDYFEDGEIDRL 115 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHHCC---SSEEEEECCSSCGGGTSCTTCCSEE
T ss_pred CCCCeEEEEccCcCHHHHHHHHHC-CCCCEEEEEcCHHHHHHHHHHHHHcCC---CCEEEEeCCHHHHHhhcCCCCCCEE
Confidence 456799999999999999999984 678999999999999999998865442 58999999999866 667889999
Q ss_pred EecccccCcc--------cHHHHHHHHHhcccCCCEEEEEe
Q 025144 146 TMGYGLRNVV--------DKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 146 ~~~~~l~~~~--------~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
++++...+.. ....+++.+.++|+|||.+++..
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 116 YLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp EEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 9987654332 13679999999999999998764
No 115
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.75 E-value=2.5e-17 Score=129.03 Aligned_cols=159 Identities=16% Similarity=0.121 Sum_probs=111.9
Q ss_pred HHHHhhhC-CCCCCeEEEecCCC--ChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC
Q 025144 59 RMAVSWSG-AKTGDNVLDVCCGS--GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL 135 (257)
Q Consensus 59 ~~~~~~~~-~~~~~~vLdiG~G~--G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 135 (257)
....+.+. .....+|||||||+ +..+..+++...|+.+|+++|.|+.|++.+++++...+ ..++.++++|+.++
T Consensus 67 ~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~---~~~~~~v~aD~~~~ 143 (277)
T 3giw_A 67 NRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP---EGRTAYVEADMLDP 143 (277)
T ss_dssp HHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS---SSEEEEEECCTTCH
T ss_pred HHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC---CCcEEEEEecccCh
Confidence 33334443 33456999999997 55666666665688999999999999999999875432 14799999999885
Q ss_pred C----CC--CCccc-----EEEecccccCccc---HHHHHHHHHhcccCCCEEEEEeecCCCchh-HHHHHHHHHhhhhh
Q 025144 136 P----FS--DCFFD-----AITMGYGLRNVVD---KRKALEESFRVLKPGSRISVLDFNKSTQPF-TTAIQEWMIDNVVV 200 (257)
Q Consensus 136 ~----~~--~~~~D-----~v~~~~~l~~~~~---~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~-~~~~~~~~~~~~~~ 200 (257)
. .+ .+.|| .|+++.+|||+++ +..+++++++.|+|||.|++.+...+..+. ...+...+.... .
T Consensus 144 ~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p~~~~~~~~~~~~~g-~ 222 (277)
T 3giw_A 144 ASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAPQEVGRVAREYAARN-M 222 (277)
T ss_dssp HHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTSHHHHHHHHHHHHHTT-C
T ss_pred hhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCCHHHHHHHHHHHHhcC-C
Confidence 2 01 23455 6889999999987 578999999999999999998877653321 122222221100 0
Q ss_pred hhhccCCchhhhhhhHHHHhccCCHHHHHHHHHHcCceeeE
Q 025144 201 PVASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAK 241 (257)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 241 (257)
...+++.+++..+|. ||++++
T Consensus 223 ------------------p~~~rs~~ei~~~f~--Glelve 243 (277)
T 3giw_A 223 ------------------PMRLRTHAEAEEFFE--GLELVE 243 (277)
T ss_dssp ------------------CCCCCCHHHHHHTTT--TSEECT
T ss_pred ------------------CCccCCHHHHHHHhC--CCcccC
Confidence 014679999999995 999664
No 116
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.74 E-value=1.3e-17 Score=126.51 Aligned_cols=114 Identities=22% Similarity=0.443 Sum_probs=93.3
Q ss_pred CCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-CCCCcccE
Q 025144 66 GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-FSDCFFDA 144 (257)
Q Consensus 66 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~ 144 (257)
...++.+|||+|||+|..+..+++.+++..+++++|+|+.+++.+++++...+.. .++.++++|+.+++ ..+++||+
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~fD~ 96 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLI--DRVTLIKDGHQNMDKYIDCPVKA 96 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCG--GGEEEECSCGGGGGGTCCSCEEE
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC--CCeEEEECCHHHHhhhccCCceE
Confidence 3567789999999999999999998766679999999999999999998765432 58999999998765 55688999
Q ss_pred EEeccccc---------CcccHHHHHHHHHhcccCCCEEEEEeecC
Q 025144 145 ITMGYGLR---------NVVDKRKALEESFRVLKPGSRISVLDFNK 181 (257)
Q Consensus 145 v~~~~~l~---------~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 181 (257)
|+++..+. ...+...+++++.++|||||.+++..+..
T Consensus 97 v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 142 (197)
T 3eey_A 97 VMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYG 142 (197)
T ss_dssp EEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCB
T ss_pred EEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccC
Confidence 99877551 11245679999999999999998887553
No 117
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.74 E-value=1.5e-17 Score=124.87 Aligned_cols=108 Identities=20% Similarity=0.279 Sum_probs=86.0
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-CCCCcccEE
Q 025144 67 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-FSDCFFDAI 145 (257)
Q Consensus 67 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~v 145 (257)
..++.+|||+|||+|..+..+++. +.+|+++|+|+.|++.|+++.+..+. .++.+++.+...++ +.+++||+|
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~---~~v~~~~~~~~~l~~~~~~~fD~v 93 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGI---ENTELILDGHENLDHYVREPIRAA 93 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTC---CCEEEEESCGGGGGGTCCSCEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCC---CcEEEEeCcHHHHHhhccCCcCEE
Confidence 467889999999999999999876 57999999999999999999876543 57999998877643 446789999
Q ss_pred Eeccc-ccC--------cccHHHHHHHHHhcccCCCEEEEEeec
Q 025144 146 TMGYG-LRN--------VVDKRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 146 ~~~~~-l~~--------~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
+++.. +++ ..+....++++.++|||||.+++..+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 94 IFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp EEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred EEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 98732 222 134567899999999999999887754
No 118
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.74 E-value=1e-16 Score=123.67 Aligned_cols=106 Identities=18% Similarity=0.101 Sum_probs=82.0
Q ss_pred hCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC---CCCCc
Q 025144 65 SGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP---FSDCF 141 (257)
Q Consensus 65 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~ 141 (257)
+.+.++.+|||+|||+|..+..+++..++..+|+++|+|+.|++.+.+..... .++.++.+|+.... ...++
T Consensus 72 ~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r-----~nv~~i~~Da~~~~~~~~~~~~ 146 (232)
T 3id6_C 72 NPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR-----PNIFPLLADARFPQSYKSVVEN 146 (232)
T ss_dssp CSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC-----TTEEEEECCTTCGGGTTTTCCC
T ss_pred cCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc-----CCeEEEEcccccchhhhccccc
Confidence 34788999999999999999999998877889999999999876554433221 58999999997642 12468
Q ss_pred ccEEEecccccCcccHHHH-HHHHHhcccCCCEEEEEe
Q 025144 142 FDAITMGYGLRNVVDKRKA-LEESFRVLKPGSRISVLD 178 (257)
Q Consensus 142 ~D~v~~~~~l~~~~~~~~~-l~~~~~~Lk~gG~l~~~~ 178 (257)
||+|++.... ++.... ...+.+.|||||.+++..
T Consensus 147 ~D~I~~d~a~---~~~~~il~~~~~~~LkpGG~lvisi 181 (232)
T 3id6_C 147 VDVLYVDIAQ---PDQTDIAIYNAKFFLKVNGDMLLVI 181 (232)
T ss_dssp EEEEEECCCC---TTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEEecCCC---hhHHHHHHHHHHHhCCCCeEEEEEE
Confidence 9999987654 444444 456666999999998864
No 119
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.74 E-value=8.2e-17 Score=123.20 Aligned_cols=105 Identities=15% Similarity=0.056 Sum_probs=81.9
Q ss_pred hCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC----CCCCC
Q 025144 65 SGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL----PFSDC 140 (257)
Q Consensus 65 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~----~~~~~ 140 (257)
+.+.++.+|||+|||+|..+..+++..+ ..+|+++|+|+.|++.+.+..+.. .++.++.+|.... +++ +
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~-----~~v~~~~~d~~~~~~~~~~~-~ 125 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRER-----NNIIPLLFDASKPWKYSGIV-E 125 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHC-----SSEEEECSCTTCGGGTTTTC-C
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcC-----CCeEEEEcCCCCchhhcccc-c
Confidence 4566788999999999999999998864 569999999999887666554322 5788889998763 333 7
Q ss_pred cccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEe
Q 025144 141 FFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 141 ~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
+||+|++.. . ...+...++++++++|||||.+++..
T Consensus 126 ~fD~V~~~~-~-~~~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 126 KVDLIYQDI-A-QKNQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp CEEEEEECC-C-STTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ceeEEEEec-c-ChhHHHHHHHHHHHHhCCCCEEEEEE
Confidence 899999873 2 22334456899999999999998874
No 120
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.74 E-value=2.4e-17 Score=135.17 Aligned_cols=118 Identities=21% Similarity=0.217 Sum_probs=97.6
Q ss_pred hHHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccC
Q 025144 53 QHRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDA 132 (257)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~ 132 (257)
....+++.+...+...++.+|||||||+|.++..+++. +..+|+++|+|+ |++.|+++++..+.. .++.++++|+
T Consensus 48 r~~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~--g~~~v~gvD~s~-~~~~a~~~~~~~~~~--~~i~~~~~d~ 122 (340)
T 2fyt_A 48 RTESYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKA--GAKKVLGVDQSE-ILYQAMDIIRLNKLE--DTITLIKGKI 122 (340)
T ss_dssp HHHHHHHHHHHCGGGTTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEESST-HHHHHHHHHHHTTCT--TTEEEEESCT
T ss_pred HHHHHHHHHHhhhhhcCCCEEEEeeccCcHHHHHHHHc--CCCEEEEEChHH-HHHHHHHHHHHcCCC--CcEEEEEeeH
Confidence 34556677777666778889999999999999999876 235899999996 999999887655432 5899999999
Q ss_pred CCCCCCCCcccEEEecc---cccCcccHHHHHHHHHhcccCCCEEE
Q 025144 133 LDLPFSDCFFDAITMGY---GLRNVVDKRKALEESFRVLKPGSRIS 175 (257)
Q Consensus 133 ~~~~~~~~~~D~v~~~~---~l~~~~~~~~~l~~~~~~Lk~gG~l~ 175 (257)
.++++++++||+|++.. .+.+..++..++..+.++|||||.++
T Consensus 123 ~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 123 EEVHLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TTSCCSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred HHhcCCCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 99888778999999876 45555678889999999999999987
No 121
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.73 E-value=3.4e-17 Score=144.11 Aligned_cols=127 Identities=19% Similarity=0.179 Sum_probs=102.4
Q ss_pred HHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhh---ccCCCeeEEEc
Q 025144 54 HRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSK---ACYKNIEWVEG 130 (257)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~---~~~~~~~~~~~ 130 (257)
.....+.+...+...++.+|||||||+|.++..+++..++..+|+|+|+|+.|++.|++++..... ....++.++++
T Consensus 706 ~eqRle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqG 785 (950)
T 3htx_A 706 SKQRVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDG 785 (950)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEES
T ss_pred HHHHHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEEC
Confidence 334455555666556788999999999999999998743447999999999999999987653211 12257999999
Q ss_pred cCCCCCCCCCcccEEEecccccCcccHH--HHHHHHHhcccCCCEEEEEeecC
Q 025144 131 DALDLPFSDCFFDAITMGYGLRNVVDKR--KALEESFRVLKPGSRISVLDFNK 181 (257)
Q Consensus 131 d~~~~~~~~~~~D~v~~~~~l~~~~~~~--~~l~~~~~~Lk~gG~l~~~~~~~ 181 (257)
|+.++++++++||+|++..+++|+++.. .+++++.++|||| .+++.+++.
T Consensus 786 Da~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 786 SILEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp CTTSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred chHhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCc
Confidence 9999988889999999999999998754 5899999999999 777777654
No 122
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.73 E-value=2.3e-17 Score=127.61 Aligned_cols=154 Identities=16% Similarity=0.207 Sum_probs=98.3
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCC-hhHHHHH---HhhhhhhhhccCCCeeEEEccCCCCCCC-CCcc
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFS-KNQLSMA---SSRQDLVSKACYKNIEWVEGDALDLPFS-DCFF 142 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s-~~~~~~a---~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~ 142 (257)
.++.+|||||||+|..+..+++. .++.+|+|+|+| +.|++.| +++....+ ..++.+.++|..+++.. .+.+
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~-~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~---~~~v~~~~~d~~~l~~~~~d~v 98 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAIN-DQNTFYIGIDPVKENLFDISKKIIKKPSKGG---LSNVVFVIAAAESLPFELKNIA 98 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHT-CTTEEEEEECSCCGGGHHHHHHHTSCGGGTC---CSSEEEECCBTTBCCGGGTTCE
T ss_pred CCCCEEEEEeccCcHHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHHHHHHcC---CCCeEEEEcCHHHhhhhccCeE
Confidence 56779999999999999999876 467899999999 6777766 66654433 25899999999987521 1445
Q ss_pred cEEEecccccC-----cccHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHH
Q 025144 143 DAITMGYGLRN-----VVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKS 217 (257)
Q Consensus 143 D~v~~~~~l~~-----~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (257)
|.|.+++.... ..+...++++++++|||||.+++................... . ...
T Consensus 99 ~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~----------~-~~~------- 160 (225)
T 3p2e_A 99 DSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIKKRGLP----------L-LSK------- 160 (225)
T ss_dssp EEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC-------------------------CCH-------
T ss_pred EEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchhhhcCCC----------C-CCh-------
Confidence 55555443221 123467899999999999999884322211100000000000 0 000
Q ss_pred HHhccCCHHHHHHHHHHcCceeeEEeeec
Q 025144 218 SIREFLTGKDLEKLALEIGFSRAKHYELS 246 (257)
Q Consensus 218 ~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 246 (257)
.++..+++.++++++||++.+...+.
T Consensus 161 ---~~~~~~el~~~l~~aGf~v~~~~~~~ 186 (225)
T 3p2e_A 161 ---AYFLSEQYKAELSNSGFRIDDVKELD 186 (225)
T ss_dssp ---HHHHSHHHHHHHHHHTCEEEEEEEEC
T ss_pred ---hhcchHHHHHHHHHcCCCeeeeeecC
Confidence 01122469999999999988877654
No 123
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.73 E-value=5.8e-17 Score=127.91 Aligned_cols=113 Identities=19% Similarity=0.372 Sum_probs=95.9
Q ss_pred HHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCC
Q 025144 58 KRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF 137 (257)
Q Consensus 58 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~ 137 (257)
...+...+...++.+|||+|||+|.++..+++.+++..+++++|+|+.+++.|+++++..+.. .++.+.++|+.+. +
T Consensus 82 ~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~-~ 158 (255)
T 3mb5_A 82 AALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFD--DRVTIKLKDIYEG-I 158 (255)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCT--TTEEEECSCGGGC-C
T ss_pred HHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCC--CceEEEECchhhc-c
Confidence 345666778888999999999999999999998767889999999999999999998765432 3599999999864 5
Q ss_pred CCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEe
Q 025144 138 SDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 138 ~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
++++||+|++ +.+++..+++++.++|+|||.+++..
T Consensus 159 ~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~ 194 (255)
T 3mb5_A 159 EEENVDHVIL-----DLPQPERVVEHAAKALKPGGFFVAYT 194 (255)
T ss_dssp CCCSEEEEEE-----CSSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred CCCCcCEEEE-----CCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 6788999998 34567789999999999999998865
No 124
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.73 E-value=2.4e-17 Score=131.57 Aligned_cols=111 Identities=21% Similarity=0.315 Sum_probs=91.6
Q ss_pred HHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhh-hhccCCCeeEEEccCCCCCCC
Q 025144 60 MAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLV-SKACYKNIEWVEGDALDLPFS 138 (257)
Q Consensus 60 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~-~~~~~~~~~~~~~d~~~~~~~ 138 (257)
.+...+...++.+|||+|||+|..+..+++.+.+..+++++|+++.+++.++++++.. +. .++.+.++|+.+ +++
T Consensus 101 ~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~---~~v~~~~~d~~~-~~~ 176 (275)
T 1yb2_A 101 YIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI---GNVRTSRSDIAD-FIS 176 (275)
T ss_dssp -----CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC---TTEEEECSCTTT-CCC
T ss_pred HHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC---CcEEEEECchhc-cCc
Confidence 4555667788899999999999999999988556789999999999999999988654 31 589999999988 555
Q ss_pred CCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 139 DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 139 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
+++||+|++ +.+++..+++++.++|||||.+++.+.
T Consensus 177 ~~~fD~Vi~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~ 212 (275)
T 1yb2_A 177 DQMYDAVIA-----DIPDPWNHVQKIASMMKPGSVATFYLP 212 (275)
T ss_dssp SCCEEEEEE-----CCSCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred CCCccEEEE-----cCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 678999998 456778899999999999999988763
No 125
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.73 E-value=2.5e-17 Score=135.60 Aligned_cols=118 Identities=17% Similarity=0.115 Sum_probs=95.6
Q ss_pred HHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCC
Q 025144 54 HRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDAL 133 (257)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~ 133 (257)
...+++.+.......++.+|||+|||+|.++..+++. +..+|+++|+| ++++.|+++.+..+.. .++.++++|+.
T Consensus 51 ~~~~~~~i~~~~~~~~~~~VLDvGcG~G~~~~~la~~--g~~~v~gvD~s-~~l~~a~~~~~~~~~~--~~v~~~~~d~~ 125 (349)
T 3q7e_A 51 TLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKA--GARKVIGIECS-SISDYAVKIVKANKLD--HVVTIIKGKVE 125 (349)
T ss_dssp HHHHHHHHHTCHHHHTTCEEEEESCTTSHHHHHHHHT--TCSEEEEEECS-THHHHHHHHHHHTTCT--TTEEEEESCTT
T ss_pred HHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHC--CCCEEEEECcH-HHHHHHHHHHHHcCCC--CcEEEEECcHH
Confidence 4445555555444567889999999999999999887 34599999999 5999999988765433 46999999999
Q ss_pred CCCCCCCcccEEEecccc---cCcccHHHHHHHHHhcccCCCEEEE
Q 025144 134 DLPFSDCFFDAITMGYGL---RNVVDKRKALEESFRVLKPGSRISV 176 (257)
Q Consensus 134 ~~~~~~~~~D~v~~~~~l---~~~~~~~~~l~~~~~~Lk~gG~l~~ 176 (257)
++++++++||+|++..+. .+.+++..++..+.++|||||.++.
T Consensus 126 ~~~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 126 EVELPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp TCCCSSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred HccCCCCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 988888999999987653 3446789999999999999999864
No 126
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.73 E-value=1.3e-17 Score=134.44 Aligned_cols=111 Identities=10% Similarity=0.168 Sum_probs=85.4
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhcc---CCCeeEEEccCC------CC--C
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKAC---YKNIEWVEGDAL------DL--P 136 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~---~~~~~~~~~d~~------~~--~ 136 (257)
+++.+|||||||+|..+..++.. ...+|+|+|+|+.|++.|+++....+... ..++.+.+.|+. ++ +
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~--~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~ 124 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYG--EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREV 124 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTT
T ss_pred CCCCeEEEEecCCcHhHHHHHhc--CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcc
Confidence 35789999999999877766654 35699999999999999999876532110 002567788772 21 2
Q ss_pred CCCCcccEEEecccccCc---ccHHHHHHHHHhcccCCCEEEEEeec
Q 025144 137 FSDCFFDAITMGYGLRNV---VDKRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 137 ~~~~~~D~v~~~~~l~~~---~~~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
+++++||+|+|.+++|++ ++...++++++++|||||.+++.+++
T Consensus 125 ~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 125 FYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp CCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 456899999999999875 45689999999999999999887765
No 127
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.72 E-value=2.4e-16 Score=122.17 Aligned_cols=104 Identities=24% Similarity=0.218 Sum_probs=84.9
Q ss_pred CCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC---CCCCcc
Q 025144 66 GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP---FSDCFF 142 (257)
Q Consensus 66 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~ 142 (257)
...++.+|||+|||+|.++..+++.+++..+++++|+|+.+++.++++.+.. .++.++++|+.+.. ..+++|
T Consensus 70 ~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~-----~~v~~~~~d~~~~~~~~~~~~~~ 144 (227)
T 1g8a_A 70 PIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-----RNIVPILGDATKPEEYRALVPKV 144 (227)
T ss_dssp CCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-----TTEEEEECCTTCGGGGTTTCCCE
T ss_pred CCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc-----CCCEEEEccCCCcchhhcccCCc
Confidence 4667889999999999999999988766679999999999999998877543 58999999998732 123689
Q ss_pred cEEEecccccCcccH-HHHHHHHHhcccCCCEEEEE
Q 025144 143 DAITMGYGLRNVVDK-RKALEESFRVLKPGSRISVL 177 (257)
Q Consensus 143 D~v~~~~~l~~~~~~-~~~l~~~~~~Lk~gG~l~~~ 177 (257)
|+|++... .++. ..++.++.++|||||.+++.
T Consensus 145 D~v~~~~~---~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 145 DVIFEDVA---QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp EEEEECCC---STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEECCC---CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 99998654 2333 44599999999999999887
No 128
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.72 E-value=4.6e-17 Score=126.80 Aligned_cols=108 Identities=21% Similarity=0.148 Sum_probs=86.0
Q ss_pred hhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC---CCCCC
Q 025144 64 WSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL---PFSDC 140 (257)
Q Consensus 64 ~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~ 140 (257)
.+.+.++.+|||+|||+|.++..+++.+++..+++++|+|+.+++.+.++.+.. .++.++.+|+.+. +..++
T Consensus 72 ~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-----~~v~~~~~d~~~~~~~~~~~~ 146 (233)
T 2ipx_A 72 QIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-----TNIIPVIEDARHPHKYRMLIA 146 (233)
T ss_dssp CCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-----TTEEEECSCTTCGGGGGGGCC
T ss_pred eecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-----CCeEEEEcccCChhhhcccCC
Confidence 345677889999999999999999998766679999999999887777665432 5899999999873 34467
Q ss_pred cccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEe
Q 025144 141 FFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 141 ~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
+||+|++... .......++.++.++|||||.+++..
T Consensus 147 ~~D~V~~~~~--~~~~~~~~~~~~~~~LkpgG~l~i~~ 182 (233)
T 2ipx_A 147 MVDVIFADVA--QPDQTRIVALNAHTFLRNGGHFVISI 182 (233)
T ss_dssp CEEEEEECCC--CTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cEEEEEEcCC--CccHHHHHHHHHHHHcCCCeEEEEEE
Confidence 8999998654 22233556888999999999998853
No 129
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.72 E-value=5.1e-17 Score=122.43 Aligned_cols=109 Identities=15% Similarity=0.096 Sum_probs=91.8
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC--CCCCcccEE
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP--FSDCFFDAI 145 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~D~v 145 (257)
.++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.++++++..+. .+++++++|+.+.. +++++||+|
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~fD~i 117 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR--GAASVLFVESDQRSAAVIARNIEALGL---SGATLRRGAVAAVVAAGTTSPVDLV 117 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEECCHHHHHHHHHHHHHHTC---SCEEEEESCHHHHHHHCCSSCCSEE
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC--CCCeEEEEECCHHHHHHHHHHHHHcCC---CceEEEEccHHHHHhhccCCCccEE
Confidence 46789999999999999988775 345899999999999999999866542 48999999998753 446889999
Q ss_pred EecccccCc-ccHHHHHHHHHh--cccCCCEEEEEeecC
Q 025144 146 TMGYGLRNV-VDKRKALEESFR--VLKPGSRISVLDFNK 181 (257)
Q Consensus 146 ~~~~~l~~~-~~~~~~l~~~~~--~Lk~gG~l~~~~~~~ 181 (257)
+++..+++. ++....+..+.+ +|+|||.+++.....
T Consensus 118 ~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 118 LADPPYNVDSADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp EECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred EECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 999888775 678899999999 999999998876543
No 130
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.72 E-value=9.4e-17 Score=127.02 Aligned_cols=139 Identities=16% Similarity=0.216 Sum_probs=107.5
Q ss_pred HHhhhCCC-CCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC--C
Q 025144 61 AVSWSGAK-TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP--F 137 (257)
Q Consensus 61 ~~~~~~~~-~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~--~ 137 (257)
+..+.... ++.+|||+|||+|..+..+++.. + .+|+++|+++.+++.|++++...+.. .++.++++|+.+.. +
T Consensus 40 l~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~-~-~~v~gvDi~~~~~~~a~~n~~~~~~~--~~v~~~~~D~~~~~~~~ 115 (259)
T 3lpm_A 40 LAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRT-K-AKIVGVEIQERLADMAKRSVAYNQLE--DQIEIIEYDLKKITDLI 115 (259)
T ss_dssp HHHHCCCCSSCCEEEETTCTTTHHHHHHHTTC-C-CEEEEECCSHHHHHHHHHHHHHTTCT--TTEEEECSCGGGGGGTS
T ss_pred HHHHhcCCCCCCEEEEcCCchhHHHHHHHHhc-C-CcEEEEECCHHHHHHHHHHHHHCCCc--ccEEEEECcHHHhhhhh
Confidence 44455667 78899999999999999999873 3 39999999999999999998765433 47999999998865 4
Q ss_pred CCCcccEEEecccccCc--------------------ccHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhh
Q 025144 138 SDCFFDAITMGYGLRNV--------------------VDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDN 197 (257)
Q Consensus 138 ~~~~~D~v~~~~~l~~~--------------------~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~ 197 (257)
++++||+|+++..+... .+...+++.+.++|||||.+++....
T Consensus 116 ~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~----------------- 178 (259)
T 3lpm_A 116 PKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRP----------------- 178 (259)
T ss_dssp CTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECT-----------------
T ss_pred ccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcH-----------------
Confidence 56899999997665433 23467899999999999999875311
Q ss_pred hhhhhhccCCchhhhhhhHHHHhccCCHHHHHHHHHHcCceeeEEeee
Q 025144 198 VVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYEL 245 (257)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 245 (257)
....++.+.+++.||........
T Consensus 179 -------------------------~~~~~~~~~l~~~~~~~~~~~~v 201 (259)
T 3lpm_A 179 -------------------------ERLLDIIDIMRKYRLEPKRIQFV 201 (259)
T ss_dssp -------------------------TTHHHHHHHHHHTTEEEEEEEEE
T ss_pred -------------------------HHHHHHHHHHHHCCCceEEEEEe
Confidence 13457778888999987776544
No 131
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.72 E-value=1e-16 Score=126.68 Aligned_cols=113 Identities=21% Similarity=0.335 Sum_probs=96.5
Q ss_pred HHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhh-hhccCCCeeEEEccCCCCCC
Q 025144 59 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLV-SKACYKNIEWVEGDALDLPF 137 (257)
Q Consensus 59 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~-~~~~~~~~~~~~~d~~~~~~ 137 (257)
..+...+...++.+|||+|||+|.++..+++.+++..+++++|+++.+++.++++++.. + ..++.+..+|+.+.++
T Consensus 86 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g---~~~v~~~~~d~~~~~~ 162 (258)
T 2pwy_A 86 SAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ---VENVRFHLGKLEEAEL 162 (258)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC---CCCEEEEESCGGGCCC
T ss_pred HHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC---CCCEEEEECchhhcCC
Confidence 44556677888999999999999999999998767789999999999999999987654 3 2689999999998767
Q ss_pred CCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 138 SDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 138 ~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
++++||+|++. .+++..+++++.++|+|||.+++...
T Consensus 163 ~~~~~D~v~~~-----~~~~~~~l~~~~~~L~~gG~l~~~~~ 199 (258)
T 2pwy_A 163 EEAAYDGVALD-----LMEPWKVLEKAALALKPDRFLVAYLP 199 (258)
T ss_dssp CTTCEEEEEEE-----SSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred CCCCcCEEEEC-----CcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 77889999983 45677899999999999999988763
No 132
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.72 E-value=6.6e-17 Score=124.13 Aligned_cols=107 Identities=16% Similarity=0.164 Sum_probs=88.6
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC--CCCCcccEE
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP--FSDCFFDAI 145 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~D~v 145 (257)
.++.+|||||||+|.++..+++.. |+.+++|+|+|+.+++.|+++....+. .++.++++|+.+++ +++++||.|
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~giD~s~~~l~~a~~~~~~~~~---~nv~~~~~d~~~l~~~~~~~~~d~v 112 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQN-PDINYIGIELFKSVIVTAVQKVKDSEA---QNVKLLNIDADTLTDVFEPGEVKRV 112 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHSCC---SSEEEECCCGGGHHHHCCTTSCCEE
T ss_pred CCCceEEEEecCCCHHHHHHHHHC-CCCCEEEEEechHHHHHHHHHHHHcCC---CCEEEEeCCHHHHHhhcCcCCcCEE
Confidence 356799999999999999999884 778999999999999999998765432 58999999998764 667889999
Q ss_pred EecccccCccc--------HHHHHHHHHhcccCCCEEEEEe
Q 025144 146 TMGYGLRNVVD--------KRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 146 ~~~~~l~~~~~--------~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
++++...+... ...+++.+.++|||||.+++..
T Consensus 113 ~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 113 YLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp EEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred EEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 98765443321 3678999999999999998764
No 133
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.72 E-value=4.7e-17 Score=125.69 Aligned_cols=147 Identities=9% Similarity=0.090 Sum_probs=106.0
Q ss_pred hhHHHHhhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHH
Q 025144 29 SERQELFSRIAPVYDNLNDLLSFGQHRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLS 108 (257)
Q Consensus 29 ~~~~~~y~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~ 108 (257)
+.+.+.++..+..+..... ......+.+..++...++.+|||+|||+|..+..+++.++++.+|+++|+++.+++
T Consensus 23 ~~v~~~~~~~~~~~~~~~~-----~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~ 97 (221)
T 3u81_A 23 QSVLEAIDTYCTQKEWAMN-----VGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAA 97 (221)
T ss_dssp HHHHHHHHHHHHHHTCGGG-----CCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHH
T ss_pred HHHHHHHHHHhhhcCcCcc-----cCHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHH
Confidence 4455566666554443211 11222233333334446779999999999999999987655789999999999999
Q ss_pred HHHhhhhhhhhccCCCeeEEEccCCCC-C-CC----CCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeecCC
Q 025144 109 MASSRQDLVSKACYKNIEWVEGDALDL-P-FS----DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKS 182 (257)
Q Consensus 109 ~a~~~~~~~~~~~~~~~~~~~~d~~~~-~-~~----~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~ 182 (257)
.|+++++..+.. .+++++++|..+. + .+ .++||+|++....++..+....+..+ ++|||||.+++.+...+
T Consensus 98 ~a~~~~~~~~~~--~~v~~~~~d~~~~l~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~~~ 174 (221)
T 3u81_A 98 ITQQMLNFAGLQ--DKVTILNGASQDLIPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVIVP 174 (221)
T ss_dssp HHHHHHHHHTCG--GGEEEEESCHHHHGGGTTTTSCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCCCC
T ss_pred HHHHHHHHcCCC--CceEEEECCHHHHHHHHHHhcCCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCCCc
Confidence 999998765543 4799999998542 2 22 26899999988887777667788888 99999999988766544
Q ss_pred C
Q 025144 183 T 183 (257)
Q Consensus 183 ~ 183 (257)
.
T Consensus 175 ~ 175 (221)
T 3u81_A 175 G 175 (221)
T ss_dssp C
T ss_pred c
Confidence 3
No 134
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.72 E-value=1.3e-16 Score=125.73 Aligned_cols=137 Identities=22% Similarity=0.234 Sum_probs=107.3
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEE
Q 025144 67 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAIT 146 (257)
Q Consensus 67 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 146 (257)
..++.+|||+|||+|.++..+++. + .+|+++|+|+.+++.++++....+. .+.+..+|..+. +++++||+|+
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~-g--~~v~gvDi~~~~v~~a~~n~~~~~~----~v~~~~~d~~~~-~~~~~fD~Vv 189 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKL-G--GKALGVDIDPMVLPQAEANAKRNGV----RPRFLEGSLEAA-LPFGPFDLLV 189 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT-T--CEEEEEESCGGGHHHHHHHHHHTTC----CCEEEESCHHHH-GGGCCEEEEE
T ss_pred cCCCCEEEEecCCCcHHHHHHHHh-C--CeEEEEECCHHHHHHHHHHHHHcCC----cEEEEECChhhc-CcCCCCCEEE
Confidence 456789999999999999998876 3 3999999999999999998765431 288888888762 3457899999
Q ss_pred ecccccCcccHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHHHHhccCCHH
Q 025144 147 MGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGK 226 (257)
Q Consensus 147 ~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (257)
++...+ ....++..+.++|||||.+++...... +.+
T Consensus 190 ~n~~~~---~~~~~l~~~~~~LkpgG~lils~~~~~-----------------------------------------~~~ 225 (254)
T 2nxc_A 190 ANLYAE---LHAALAPRYREALVPGGRALLTGILKD-----------------------------------------RAP 225 (254)
T ss_dssp EECCHH---HHHHHHHHHHHHEEEEEEEEEEEEEGG-----------------------------------------GHH
T ss_pred ECCcHH---HHHHHHHHHHHHcCCCCEEEEEeeccC-----------------------------------------CHH
Confidence 876544 357889999999999999988754321 346
Q ss_pred HHHHHHHHcCceeeEEeeecCceeEEEeeeC
Q 025144 227 DLEKLALEIGFSRAKHYELSGGLMGNLVATR 257 (257)
Q Consensus 227 ~~~~~l~~~Gf~~~~~~~~~~g~~~~~~~~k 257 (257)
++.+.++++||++++.... +.|..++++|
T Consensus 226 ~v~~~l~~~Gf~~~~~~~~--~~W~~l~~~k 254 (254)
T 2nxc_A 226 LVREAMAGAGFRPLEEAAE--GEWVLLAYGR 254 (254)
T ss_dssp HHHHHHHHTTCEEEEEEEE--TTEEEEEEEC
T ss_pred HHHHHHHHCCCEEEEEecc--CCeEEEEEEC
Confidence 8889999999999887664 3356666665
No 135
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.72 E-value=9.7e-17 Score=132.12 Aligned_cols=144 Identities=17% Similarity=0.162 Sum_probs=106.3
Q ss_pred chhHHHHhhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHH
Q 025144 28 SSERQELFSRIAPVYDNLNDLLSFGQHRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQL 107 (257)
Q Consensus 28 ~~~~~~~y~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~ 107 (257)
......+|+.+...+..............+.+.+...+...++.+|||||||+|.++..+++. +..+|+++|+|+ ++
T Consensus 9 ~~~~~~y~~~y~~~~~~~~ml~d~~r~~~y~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~~vD~s~-~~ 85 (348)
T 2y1w_A 9 ESSAVQYFQFYGYLSQQQNMMQDYVRTGTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MA 85 (348)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHTCHHHHHHHHHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEECST-HH
T ss_pred cccHHHHHHHHhhhhHHHHHhcchHHHHHHHHHHHhccccCCcCEEEEcCCCccHHHHHHHhC--CCCEEEEECCHH-HH
Confidence 344445555444333222222223345556677777777778889999999999999999876 345999999996 88
Q ss_pred HHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEecccccCcc--cHHHHHHHHHhcccCCCEEEEE
Q 025144 108 SMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGYGLRNVV--DKRKALEESFRVLKPGSRISVL 177 (257)
Q Consensus 108 ~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~--~~~~~l~~~~~~Lk~gG~l~~~ 177 (257)
+.++++++..+.. .++.++.+|+.+++++ ++||+|++..+++++. +....+.++++.|||||.+++.
T Consensus 86 ~~a~~~~~~~~l~--~~v~~~~~d~~~~~~~-~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 86 QHAEVLVKSNNLT--DRIVVIPGKVEEVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp HHHHHHHHHTTCT--TTEEEEESCTTTCCCS-SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred HHHHHHHHHcCCC--CcEEEEEcchhhCCCC-CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 9898887654432 5799999999987655 6799999998877763 4677888999999999999754
No 136
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.71 E-value=1.6e-16 Score=128.31 Aligned_cols=152 Identities=15% Similarity=0.165 Sum_probs=109.5
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhh-hccCCCeeEEEccCCCCCC--CCCcccE
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVS-KACYKNIEWVEGDALDLPF--SDCFFDA 144 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~-~~~~~~~~~~~~d~~~~~~--~~~~~D~ 144 (257)
.++.+|||||||+|..+..+++. .+..+++++|+|+.+++.+++++.... ....+++.++.+|+.+... ++++||+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDv 172 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRH-GTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDV 172 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTC-TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhC-CCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeE
Confidence 45679999999999999999876 346799999999999999999874311 1112689999999877542 4678999
Q ss_pred EEecccccCcccH----HHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHHHHh
Q 025144 145 ITMGYGLRNVVDK----RKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIR 220 (257)
Q Consensus 145 v~~~~~l~~~~~~----~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (257)
|++....+..+.. ..+++.++++|||||.+++...+....
T Consensus 173 Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~------------------------------------ 216 (304)
T 3bwc_A 173 VIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLD------------------------------------ 216 (304)
T ss_dssp EEEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTTC------------------------------------
T ss_pred EEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccc------------------------------------
Confidence 9997665543322 688999999999999998764321000
Q ss_pred ccCCHHHHHHHHHHcCceeeEEeee-----cCceeEEEeeeC
Q 025144 221 EFLTGKDLEKLALEIGFSRAKHYEL-----SGGLMGNLVATR 257 (257)
Q Consensus 221 ~~~~~~~~~~~l~~~Gf~~~~~~~~-----~~g~~~~~~~~k 257 (257)
.....++.+.++++||..+..+.. ..|.+..++|.|
T Consensus 217 -~~~~~~~~~~l~~~GF~~v~~~~~~vP~yp~g~w~f~~as~ 257 (304)
T 3bwc_A 217 -LELIEKMSRFIRETGFASVQYALMHVPTYPCGSIGTLVCSK 257 (304)
T ss_dssp -HHHHHHHHHHHHHHTCSEEEEEECCCTTSTTSCCEEEEEES
T ss_pred -hHHHHHHHHHHHhCCCCcEEEEEeecccccCcceEEEEEeC
Confidence 012367888999999988876643 256777777754
No 137
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.71 E-value=2.5e-16 Score=118.60 Aligned_cols=116 Identities=22% Similarity=0.307 Sum_probs=94.3
Q ss_pred HHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCC
Q 025144 55 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD 134 (257)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 134 (257)
......+...+...++.+|||+|||+|..+..+++.. .+++++|+|+.+++.+++++...+.. .++.+.++|..+
T Consensus 19 ~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~--~~~~~~~~d~~~ 93 (192)
T 1l3i_A 19 MEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLG--DNVTLMEGDAPE 93 (192)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCC--TTEEEEESCHHH
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCC--cceEEEecCHHH
Confidence 4455566666778888999999999999999998762 79999999999999999987654422 478999999876
Q ss_pred CCCCC-CcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 135 LPFSD-CFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 135 ~~~~~-~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
.++. ++||+|++..+++ +...+++.+.++|+|||.+++...
T Consensus 94 -~~~~~~~~D~v~~~~~~~---~~~~~l~~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 94 -ALCKIPDIDIAVVGGSGG---ELQEILRIIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp -HHTTSCCEEEEEESCCTT---CHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred -hcccCCCCCEEEECCchH---HHHHHHHHHHHhcCCCcEEEEEec
Confidence 2222 5899999987765 458899999999999999988764
No 138
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.70 E-value=8.9e-17 Score=132.04 Aligned_cols=127 Identities=14% Similarity=0.082 Sum_probs=98.9
Q ss_pred HHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhh-------hhhccCCCee
Q 025144 54 HRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDL-------VSKACYKNIE 126 (257)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~-------~~~~~~~~~~ 126 (257)
.......++..+.+.++.+|||||||+|..+..++... +..+++|+|+|+.+++.|+++.+. .+.. ..++.
T Consensus 158 ~~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~-g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~-~~rVe 235 (438)
T 3uwp_A 158 SFDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAAT-NCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKK-HAEYT 235 (438)
T ss_dssp HHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHC-CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBC-CCEEE
T ss_pred CHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCC-CCCeE
Confidence 33444556667788899999999999999999998874 334699999999999999875432 1110 15799
Q ss_pred EEEccCCCCCCCC--CcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeecCCC
Q 025144 127 WVEGDALDLPFSD--CFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKST 183 (257)
Q Consensus 127 ~~~~d~~~~~~~~--~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~ 183 (257)
++++|+.++++++ +.+|+|+++..+ +.++....|.+++++|||||.|++.+...+.
T Consensus 236 fi~GD~~~lp~~d~~~~aDVVf~Nn~~-F~pdl~~aL~Ei~RvLKPGGrIVssE~f~p~ 293 (438)
T 3uwp_A 236 LERGDFLSEEWRERIANTSVIFVNNFA-FGPEVDHQLKERFANMKEGGRIVSSKPFAPL 293 (438)
T ss_dssp EEECCTTSHHHHHHHHTCSEEEECCTT-CCHHHHHHHHHHHTTSCTTCEEEESSCSSCT
T ss_pred EEECcccCCccccccCCccEEEEcccc-cCchHHHHHHHHHHcCCCCcEEEEeecccCC
Confidence 9999999876543 469999997765 4578888899999999999999987655443
No 139
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.70 E-value=3.8e-16 Score=116.71 Aligned_cols=112 Identities=18% Similarity=0.232 Sum_probs=93.2
Q ss_pred HHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCC
Q 025144 55 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD 134 (257)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 134 (257)
......+...+...++.+|||+|||+|..+..+++ +..+++++|+|+.+++.++++.+..+. .++.++++|+.+
T Consensus 21 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~~~~~~d~~~ 94 (183)
T 2yxd_A 21 EEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK---RCKFVYAIDYLDGAIEVTKQNLAKFNI---KNCQIIKGRAED 94 (183)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT---TSSEEEEEECSHHHHHHHHHHHHHTTC---CSEEEEESCHHH
T ss_pred HHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHHcCC---CcEEEEECCccc
Confidence 34455566666777888999999999999999986 467999999999999999998865442 479999999987
Q ss_pred CCCCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 135 LPFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 135 ~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
++++++||+|++..+ .+...+++.+.++ |||.+++...
T Consensus 95 -~~~~~~~D~i~~~~~----~~~~~~l~~~~~~--~gG~l~~~~~ 132 (183)
T 2yxd_A 95 -VLDKLEFNKAFIGGT----KNIEKIIEILDKK--KINHIVANTI 132 (183)
T ss_dssp -HGGGCCCSEEEECSC----SCHHHHHHHHHHT--TCCEEEEEES
T ss_pred -cccCCCCcEEEECCc----ccHHHHHHHHhhC--CCCEEEEEec
Confidence 555678999999887 6678899999988 9999988764
No 140
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.70 E-value=7.5e-16 Score=122.95 Aligned_cols=140 Identities=20% Similarity=0.245 Sum_probs=107.1
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEE
Q 025144 67 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAIT 146 (257)
Q Consensus 67 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 146 (257)
..++.+|||+|||+|.++..+++.. .. +|+++|+|+.+++.++++.+..+.. .++.++++|+.++.. +++||+|+
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~-~~-~V~~vD~s~~~~~~a~~n~~~n~~~--~~v~~~~~D~~~~~~-~~~fD~Vi 197 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYG-KA-KVIAIEKDPYTFKFLVENIHLNKVE--DRMSAYNMDNRDFPG-ENIADRIL 197 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHT-CC-EEEEECCCHHHHHHHHHHHHHTTCT--TTEEEECSCTTTCCC-CSCEEEEE
T ss_pred CCCCCEEEEecccCCHHHHHHHHhC-CC-EEEEEECCHHHHHHHHHHHHHcCCC--ceEEEEECCHHHhcc-cCCccEEE
Confidence 3567899999999999999999883 33 7999999999999999988655432 458999999998765 67899999
Q ss_pred ecccccCcccHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHHHHhccCCHH
Q 025144 147 MGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGK 226 (257)
Q Consensus 147 ~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (257)
+... .+...++..+.++|||||.+++.+....... .....+
T Consensus 198 ~~~p----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~-----------------------------------~~~~~~ 238 (278)
T 2frn_A 198 MGYV----VRTHEFIPKALSIAKDGAIIHYHNTVPEKLM-----------------------------------PREPFE 238 (278)
T ss_dssp ECCC----SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGT-----------------------------------TTTTHH
T ss_pred ECCc----hhHHHHHHHHHHHCCCCeEEEEEEeeccccc-----------------------------------cccHHH
Confidence 8654 2346788899999999999988776531100 011346
Q ss_pred HHHHHHHHcCceeeE-----EeeecCcee
Q 025144 227 DLEKLALEIGFSRAK-----HYELSGGLM 250 (257)
Q Consensus 227 ~~~~~l~~~Gf~~~~-----~~~~~~g~~ 250 (257)
++.+.++++||++.. ...+..+.+
T Consensus 239 ~i~~~~~~~G~~~~~~~~~~v~~~~p~~~ 267 (278)
T 2frn_A 239 TFKRITKEYGYDVEKLNELKIKRYAPGVW 267 (278)
T ss_dssp HHHHHHHHTTCEEEEEEEEEEEEETTTEE
T ss_pred HHHHHHHHcCCeeEEeeeEEEEecCCCce
Confidence 788899999998776 455555443
No 141
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.70 E-value=2.4e-16 Score=125.88 Aligned_cols=112 Identities=23% Similarity=0.328 Sum_probs=93.9
Q ss_pred HHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCC
Q 025144 59 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFS 138 (257)
Q Consensus 59 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 138 (257)
..+...+...++.+|||+|||+|.++..+++.+++..+++++|+|+.+++.++++++..+.. .++.+..+|+.+. ++
T Consensus 102 ~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~-~~ 178 (277)
T 1o54_A 102 SFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLI--ERVTIKVRDISEG-FD 178 (277)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCG--GGEEEECCCGGGC-CS
T ss_pred HHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC--CCEEEEECCHHHc-cc
Confidence 34555667788899999999999999999998666789999999999999999987654422 4789999999875 55
Q ss_pred CCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEe
Q 025144 139 DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 139 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
+++||+|++. .+++..+++++.++|+|||.+++.+
T Consensus 179 ~~~~D~V~~~-----~~~~~~~l~~~~~~L~pgG~l~~~~ 213 (277)
T 1o54_A 179 EKDVDALFLD-----VPDPWNYIDKCWEALKGGGRFATVC 213 (277)
T ss_dssp CCSEEEEEEC-----CSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred CCccCEEEEC-----CcCHHHHHHHHHHHcCCCCEEEEEe
Confidence 6789999983 4567789999999999999998876
No 142
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.69 E-value=1.4e-16 Score=130.12 Aligned_cols=117 Identities=23% Similarity=0.241 Sum_probs=93.6
Q ss_pred HHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCC
Q 025144 54 HRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDAL 133 (257)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~ 133 (257)
...+++.+.......++.+|||+|||+|.++..+++. +..+|+++|+| .+++.|+++++..+.. .++.++++|+.
T Consensus 23 ~~~y~~ai~~~~~~~~~~~VLDiGcGtG~ls~~la~~--g~~~v~~vD~s-~~~~~a~~~~~~~~~~--~~i~~~~~d~~ 97 (328)
T 1g6q_1 23 TLSYRNAIIQNKDLFKDKIVLDVGCGTGILSMFAAKH--GAKHVIGVDMS-SIIEMAKELVELNGFS--DKITLLRGKLE 97 (328)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEETCTTSHHHHHHHHT--CCSEEEEEESS-THHHHHHHHHHHTTCT--TTEEEEESCTT
T ss_pred HHHHHHHHHhhHhhcCCCEEEEecCccHHHHHHHHHC--CCCEEEEEChH-HHHHHHHHHHHHcCCC--CCEEEEECchh
Confidence 4445555555555567789999999999999998876 33589999999 6999999887654432 57999999999
Q ss_pred CCCCCCCcccEEEeccc---ccCcccHHHHHHHHHhcccCCCEEE
Q 025144 134 DLPFSDCFFDAITMGYG---LRNVVDKRKALEESFRVLKPGSRIS 175 (257)
Q Consensus 134 ~~~~~~~~~D~v~~~~~---l~~~~~~~~~l~~~~~~Lk~gG~l~ 175 (257)
++++++++||+|++..+ +.+...+..++..+.++|||||.++
T Consensus 98 ~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 98 DVHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp TSCCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred hccCCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEE
Confidence 98877789999998754 3344568889999999999999986
No 143
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.69 E-value=1e-16 Score=126.44 Aligned_cols=163 Identities=11% Similarity=0.050 Sum_probs=104.3
Q ss_pred CCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC---CCC---CCcc
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL---PFS---DCFF 142 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~---~~~---~~~~ 142 (257)
++.+|||+|||+|.++..+++.. ++.+++++|+|+.|++.|++++...+.. .++.++++|+.+. +++ +++|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL-NGWYFLATEVDDMCFNYAKKNVEQNNLS--DLIKVVKVPQKTLLMDALKEESEIIY 141 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH-HCCEEEEEESCHHHHHHHHHHHHHTTCT--TTEEEEECCTTCSSTTTSTTCCSCCB
T ss_pred CCCEEEEeCCChhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHcCCC--ccEEEEEcchhhhhhhhhhcccCCcc
Confidence 56799999999999999998875 4679999999999999999998655432 3599999997652 333 2689
Q ss_pred cEEEecccccCcc---------------cHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCC
Q 025144 143 DAITMGYGLRNVV---------------DKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYG 207 (257)
Q Consensus 143 D~v~~~~~l~~~~---------------~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (257)
|+|+++..++... ....++..++++|||||.+.+.+. .......+ ..+ .+...
T Consensus 142 D~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~------~~~~~~~~-----l~~-~g~~~ 209 (254)
T 2h00_A 142 DFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKR------IIHDSLQL-----KKR-LRWYS 209 (254)
T ss_dssp SEEEECCCCC-------------------------CTTTTHHHHTHHHHHHH------HHHHHHHH-----GGG-BSCEE
T ss_pred cEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHH------HHHHHHhc-----ccc-eEEEE
Confidence 9999986665432 112457788999999998755421 11111111 000 00000
Q ss_pred chhhhhhhHHHHhccCCHHHHHHHHHHcCceeeEEeeecCc-eeEEEee
Q 025144 208 LAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYELSGG-LMGNLVA 255 (257)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~g-~~~~~~~ 255 (257)
.. .....+.+++.++++++||+.++......| ...++++
T Consensus 210 ~~---------~~~~~~~~~~~~~l~~~Gf~~v~~~~~~~g~~~~~~~~ 249 (254)
T 2h00_A 210 CM---------LGKKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALA 249 (254)
T ss_dssp EE---------ESSTTSHHHHHHHHHHTTCSEEEEEEEEETTEEEEEEE
T ss_pred EC---------CCChhHHHHHHHHHHHcCCCceEEEEEecCCceEEEEE
Confidence 00 001223478999999999999988877554 3444443
No 144
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.69 E-value=7.9e-16 Score=120.86 Aligned_cols=111 Identities=16% Similarity=0.225 Sum_probs=90.1
Q ss_pred CCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC-CC--CCCcc
Q 025144 66 GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-PF--SDCFF 142 (257)
Q Consensus 66 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-~~--~~~~~ 142 (257)
...++.+|||||||+|..+..+++.++++.+|+++|+++.+++.|+++++..+.. .++.++.+|+.+. +. ..++|
T Consensus 60 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~--~~v~~~~~d~~~~l~~~~~~~~f 137 (248)
T 3tfw_A 60 RLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVD--QRVTLREGPALQSLESLGECPAF 137 (248)
T ss_dssp HHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCT--TTEEEEESCHHHHHHTCCSCCCC
T ss_pred hhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC--CcEEEEEcCHHHHHHhcCCCCCe
Confidence 4456789999999999999999988754789999999999999999998765543 4799999998762 22 13489
Q ss_pred cEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeecC
Q 025144 143 DAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNK 181 (257)
Q Consensus 143 D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 181 (257)
|+|++... ..+....++++.++|||||.+++.+...
T Consensus 138 D~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~~~~~~ 173 (248)
T 3tfw_A 138 DLIFIDAD---KPNNPHYLRWALRYSRPGTLIIGDNVVR 173 (248)
T ss_dssp SEEEECSC---GGGHHHHHHHHHHTCCTTCEEEEECCSG
T ss_pred EEEEECCc---hHHHHHHHHHHHHhcCCCeEEEEeCCCc
Confidence 99998653 4466789999999999999998876543
No 145
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.69 E-value=2.1e-16 Score=128.39 Aligned_cols=112 Identities=18% Similarity=0.226 Sum_probs=90.8
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhh----ccCCCeeEEEccCCCCC----CC-
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSK----ACYKNIEWVEGDALDLP----FS- 138 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~----~~~~~~~~~~~d~~~~~----~~- 138 (257)
.++.+|||+|||+|..+..+++. +..+++++|+|+.|++.++++....+. ....++.++++|+.+.+ ++
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 110 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKG--RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRD 110 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSS
T ss_pred CCCCEEEEECCCCcHHHHHHHhc--CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhccc
Confidence 46779999999999999999875 467999999999999999998754320 01137899999999865 43
Q ss_pred -CCcccEEEecccccCc----ccHHHHHHHHHhcccCCCEEEEEeecC
Q 025144 139 -DCFFDAITMGYGLRNV----VDKRKALEESFRVLKPGSRISVLDFNK 181 (257)
Q Consensus 139 -~~~~D~v~~~~~l~~~----~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 181 (257)
+++||+|++.+++|+. +++..++++++++|||||.+++..++.
T Consensus 111 ~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 111 PQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp TTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred CCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 4589999999999987 346789999999999999998887653
No 146
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.69 E-value=3.8e-16 Score=119.61 Aligned_cols=113 Identities=17% Similarity=0.096 Sum_probs=95.3
Q ss_pred HHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC
Q 025144 56 IWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL 135 (257)
Q Consensus 56 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 135 (257)
.....+...+...++.+|||+|||+|..+..+++. ..+|+++|+|+.+++.+++++...+. .++.+..+|..+.
T Consensus 64 ~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~---~~~v~~vD~~~~~~~~a~~~~~~~~~---~~v~~~~~d~~~~ 137 (210)
T 3lbf_A 64 YMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL---VQHVCSVERIKGLQWQARRRLKNLDL---HNVSTRHGDGWQG 137 (210)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHHHTTC---CSEEEEESCGGGC
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCC---CceEEEECCcccC
Confidence 34455666677888999999999999999999987 47999999999999999998865442 4799999999886
Q ss_pred CCCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeec
Q 025144 136 PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 136 ~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
..++++||+|++..+++++++ .+.++|||||.+++....
T Consensus 138 ~~~~~~~D~i~~~~~~~~~~~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 138 WQARAPFDAIIVTAAPPEIPT------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CGGGCCEEEEEESSBCSSCCT------HHHHTEEEEEEEEEEECS
T ss_pred CccCCCccEEEEccchhhhhH------HHHHhcccCcEEEEEEcC
Confidence 555688999999999999875 588999999999887644
No 147
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.68 E-value=3.4e-17 Score=120.53 Aligned_cols=105 Identities=10% Similarity=0.120 Sum_probs=86.6
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEe
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 147 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 147 (257)
.+..+|||+|||+|-++..++.. .|+.+|+++|+|+.|++.+++++...+.. .++.+ .|.... .+.++||+|++
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~-~p~a~~~A~Di~~~~leiar~~~~~~g~~--~~v~~--~d~~~~-~~~~~~DvVLa 121 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNE-NEKIIYHAYDIDRAEIAFLSSIIGKLKTT--IKYRF--LNKESD-VYKGTYDVVFL 121 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCS-SCCCEEEEECSCHHHHHHHHHHHHHSCCS--SEEEE--ECCHHH-HTTSEEEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHhc-CCCCEEEEEeCCHHHHHHHHHHHHhcCCC--ccEEE--eccccc-CCCCCcChhhH
Confidence 55779999999999999999877 47889999999999999999998765432 24444 565543 35688999999
Q ss_pred cccccCcccHHHHHHHHHhcccCCCEEEEEe
Q 025144 148 GYGLRNVVDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 148 ~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
..++|++++....+.++++.|+|||.++-..
T Consensus 122 ~k~LHlL~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 122 LKMLPVLKQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp ETCHHHHHHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred hhHHHhhhhhHHHHHHHHHHhCCCCEEEEeC
Confidence 9999999877788889999999999986554
No 148
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.68 E-value=9.9e-16 Score=121.11 Aligned_cols=115 Identities=15% Similarity=0.200 Sum_probs=91.6
Q ss_pred HHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhh---hhhccCCCeeEEEccCCCC--
Q 025144 61 AVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDL---VSKACYKNIEWVEGDALDL-- 135 (257)
Q Consensus 61 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~---~~~~~~~~~~~~~~d~~~~-- 135 (257)
+..+....++.+|||+|||+|.++..++++. +..+++++|+++.+++.|++++.. .+.. .++.++++|+.+.
T Consensus 28 L~~~~~~~~~~~VLDlG~G~G~~~l~la~~~-~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~--~~v~~~~~D~~~~~~ 104 (260)
T 2ozv_A 28 LASLVADDRACRIADLGAGAGAAGMAVAARL-EKAEVTLYERSQEMAEFARRSLELPDNAAFS--ARIEVLEADVTLRAK 104 (260)
T ss_dssp HHHTCCCCSCEEEEECCSSSSHHHHHHHHHC-TTEEEEEEESSHHHHHHHHHHTTSGGGTTTG--GGEEEEECCTTCCHH
T ss_pred HHHHhcccCCCEEEEeCChHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHhhhhCCCc--ceEEEEeCCHHHHhh
Confidence 3344566677899999999999999999984 667999999999999999999865 3322 3699999999886
Q ss_pred -----CCCCCcccEEEecccccCc------------------ccHHHHHHHHHhcccCCCEEEEEe
Q 025144 136 -----PFSDCFFDAITMGYGLRNV------------------VDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 136 -----~~~~~~~D~v~~~~~l~~~------------------~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
.+++++||+|+++..+... .+...+++.+.++|||||.+++..
T Consensus 105 ~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 105 ARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp HHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 2456889999998544322 236788999999999999998753
No 149
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.68 E-value=1.2e-16 Score=122.95 Aligned_cols=106 Identities=10% Similarity=0.105 Sum_probs=87.9
Q ss_pred CCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC-C--CCCCcccEE
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-P--FSDCFFDAI 145 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-~--~~~~~~D~v 145 (257)
++.+|||||||+|..+..+++.. |+..|+|+|+|+.+++.|+++....+. .++.++++|+.++ + ++++++|.|
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~-p~~~v~giD~s~~~l~~a~~~~~~~~l---~nv~~~~~Da~~~l~~~~~~~~~d~v 109 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDR-PEQDFLGIEVHSPGVGACLASAHEEGL---SNLRVMCHDAVEVLHKMIPDNSLRMV 109 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHTTC---SSEEEECSCHHHHHHHHSCTTCEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHC-CCCeEEEEEecHHHHHHHHHHHHHhCC---CcEEEEECCHHHHHHHHcCCCChheE
Confidence 56799999999999999999884 778999999999999999998765443 5899999998874 2 568899999
Q ss_pred EecccccCcccH--------HHHHHHHHhcccCCCEEEEEe
Q 025144 146 TMGYGLRNVVDK--------RKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 146 ~~~~~l~~~~~~--------~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
++++...+.... ..+++.+.++|||||.+++.+
T Consensus 110 ~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 110 QLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp EEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 998654443221 359999999999999998765
No 150
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.68 E-value=1.7e-15 Score=125.03 Aligned_cols=122 Identities=21% Similarity=0.252 Sum_probs=99.8
Q ss_pred HHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCC
Q 025144 54 HRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDAL 133 (257)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~ 133 (257)
.+.+...+.......++.+|||+|||+|.++..++...++..+++|+|+|+.+++.|+++++..+. .++.+.++|+.
T Consensus 188 ~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~---~~i~~~~~D~~ 264 (354)
T 3tma_A 188 TPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGL---SWIRFLRADAR 264 (354)
T ss_dssp CHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTC---TTCEEEECCGG
T ss_pred CHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCC---CceEEEeCChh
Confidence 344556667777788889999999999999999998854568999999999999999999876543 37999999999
Q ss_pred CCCCCCCcccEEEecccccCcc--------cHHHHHHHHHhcccCCCEEEEEe
Q 025144 134 DLPFSDCFFDAITMGYGLRNVV--------DKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 134 ~~~~~~~~~D~v~~~~~l~~~~--------~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
+++.+.+.||+|+++..+.... ....+++.+.++|||||.+++.+
T Consensus 265 ~~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t 317 (354)
T 3tma_A 265 HLPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLT 317 (354)
T ss_dssp GGGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred hCccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 9876667799999977654321 13678999999999999998875
No 151
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.68 E-value=1.1e-17 Score=131.02 Aligned_cols=102 Identities=20% Similarity=0.212 Sum_probs=88.3
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEe
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 147 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 147 (257)
.++.+|||+|||+|..+..+++. +.+|+++|+|+.+++.+++++...+.. .++.++++|+.+++ ++++||+|++
T Consensus 77 ~~~~~vLD~gcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~--~~~~~~~~d~~~~~-~~~~~D~v~~ 150 (241)
T 3gdh_A 77 FKCDVVVDAFCGVGGNTIQFALT---GMRVIAIDIDPVKIALARNNAEVYGIA--DKIEFICGDFLLLA-SFLKADVVFL 150 (241)
T ss_dssp SCCSEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCG--GGEEEEESCHHHHG-GGCCCSEEEE
T ss_pred cCCCEEEECccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCC--cCeEEEECChHHhc-ccCCCCEEEE
Confidence 46789999999999999999986 479999999999999999998765432 47999999998865 4678999999
Q ss_pred cccccCcccHHHHHHHHHhcccCCCEEE
Q 025144 148 GYGLRNVVDKRKALEESFRVLKPGSRIS 175 (257)
Q Consensus 148 ~~~l~~~~~~~~~l~~~~~~Lk~gG~l~ 175 (257)
+.++++..+....+.+++++|+|||.++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~L~pgG~~i 178 (241)
T 3gdh_A 151 SPPWGGPDYATAETFDIRTMMSPDGFEI 178 (241)
T ss_dssp CCCCSSGGGGGSSSBCTTTSCSSCHHHH
T ss_pred CCCcCCcchhhhHHHHHHhhcCCcceeH
Confidence 9999998877767888999999999864
No 152
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.67 E-value=5.6e-16 Score=122.65 Aligned_cols=109 Identities=18% Similarity=0.204 Sum_probs=85.4
Q ss_pred CCCeEEEecCCCCh----hHHHHHHHhCC---CceEEEEeCChhHHHHHHhhhhhh----------------------h-
Q 025144 69 TGDNVLDVCCGSGD----LSFLLSEQVGS---QGKVIGLDFSKNQLSMASSRQDLV----------------------S- 118 (257)
Q Consensus 69 ~~~~vLdiG~G~G~----~~~~l~~~~~~---~~~v~~~D~s~~~~~~a~~~~~~~----------------------~- 118 (257)
++.+|+|+|||||. ++..+++.++. +.+|+|+|+|+.|++.|++..... .
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45699999999998 55666666532 369999999999999999864100 0
Q ss_pred -----hccCCCeeEEEccCCCCCCC-CCcccEEEecccccCcccH--HHHHHHHHhcccCCCEEEEE
Q 025144 119 -----KACYKNIEWVEGDALDLPFS-DCFFDAITMGYGLRNVVDK--RKALEESFRVLKPGSRISVL 177 (257)
Q Consensus 119 -----~~~~~~~~~~~~d~~~~~~~-~~~~D~v~~~~~l~~~~~~--~~~l~~~~~~Lk~gG~l~~~ 177 (257)
.....++.+.+.|+.+.+++ .++||+|+|.++++++++. .++++++++.|+|||.|++.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 00013689999999886554 5789999999999999754 78999999999999999763
No 153
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.67 E-value=7.4e-16 Score=125.05 Aligned_cols=121 Identities=18% Similarity=0.252 Sum_probs=95.3
Q ss_pred HHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCC
Q 025144 58 KRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF 137 (257)
Q Consensus 58 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~ 137 (257)
...+...+...++.+|||+|||+|..+..+++.+++..+|+++|+|+.+++.++++++..+. .++.++++|..+++.
T Consensus 107 s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~---~~v~~~~~D~~~~~~ 183 (315)
T 1ixk_A 107 SMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGV---LNVILFHSSSLHIGE 183 (315)
T ss_dssp HHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTC---CSEEEESSCGGGGGG
T ss_pred HHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCC---CeEEEEECChhhccc
Confidence 34445566788889999999999999999999865567999999999999999999876543 479999999988654
Q ss_pred CCCcccEEEeccc------ccCccc----------------HHHHHHHHHhcccCCCEEEEEeecC
Q 025144 138 SDCFFDAITMGYG------LRNVVD----------------KRKALEESFRVLKPGSRISVLDFNK 181 (257)
Q Consensus 138 ~~~~~D~v~~~~~------l~~~~~----------------~~~~l~~~~~~Lk~gG~l~~~~~~~ 181 (257)
.+++||+|++... ++..++ ...+++++.++|||||.+++.+.+.
T Consensus 184 ~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 184 LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred ccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 4568999998533 322222 1578999999999999998877554
No 154
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.67 E-value=1.1e-15 Score=126.74 Aligned_cols=124 Identities=16% Similarity=0.201 Sum_probs=98.3
Q ss_pred HHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCC
Q 025144 54 HRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDAL 133 (257)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~ 133 (257)
.+...+.++..+...++.+|||+|||+|.++..+++. .|+.+|+++|+|+.+++.+++++...+.....++.+...|+.
T Consensus 207 ~d~~~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~-~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~ 285 (375)
T 4dcm_A 207 LDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDK-NPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 285 (375)
T ss_dssp CCHHHHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHH-CTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTT
T ss_pred ccHHHHHHHHhCcccCCCeEEEEeCcchHHHHHHHHH-CCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhh
Confidence 3344566777777777789999999999999999998 467899999999999999999987654322236888999998
Q ss_pred CCCCCCCcccEEEecccccCcc-----cHHHHHHHHHhcccCCCEEEEEee
Q 025144 134 DLPFSDCFFDAITMGYGLRNVV-----DKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 134 ~~~~~~~~~D~v~~~~~l~~~~-----~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
+ .+++++||+|+++..+++.. ....+++++.++|||||.++++..
T Consensus 286 ~-~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n 335 (375)
T 4dcm_A 286 S-GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVAN 335 (375)
T ss_dssp T-TCCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred c-cCCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 8 45668999999999888532 234789999999999999988653
No 155
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.67 E-value=3.2e-15 Score=114.60 Aligned_cols=130 Identities=15% Similarity=0.032 Sum_probs=104.4
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEE
Q 025144 67 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAIT 146 (257)
Q Consensus 67 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 146 (257)
.+++.+|+|||||+|.++..+++. ++..+|+++|+++.+++.|+++++..+.. .++.+..+|..+...+.++||+|+
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~AvDi~~~al~~A~~N~~~~gl~--~~I~~~~gD~l~~~~~~~~~D~Iv 95 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQM-GYCDFAIAGEVVNGPYQSALKNVSEHGLT--SKIDVRLANGLSAFEEADNIDTIT 95 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHT-TCEEEEEEEESSHHHHHHHHHHHHHTTCT--TTEEEEECSGGGGCCGGGCCCEEE
T ss_pred CCCCCEEEEECCchHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCC--CcEEEEECchhhccccccccCEEE
Confidence 456789999999999999999987 46678999999999999999998776543 579999999988654444799988
Q ss_pred ecccccCcccHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHHHHhccCCHH
Q 025144 147 MGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGK 226 (257)
Q Consensus 147 ~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (257)
+.++-. +-...++....+.|+++|.+++... ...+
T Consensus 96 iaGmGg--~lI~~IL~~~~~~l~~~~~lIlqp~-------------------------------------------~~~~ 130 (230)
T 3lec_A 96 ICGMGG--RLIADILNNDIDKLQHVKTLVLQPN-------------------------------------------NRED 130 (230)
T ss_dssp EEEECH--HHHHHHHHHTGGGGTTCCEEEEEES-------------------------------------------SCHH
T ss_pred EeCCch--HHHHHHHHHHHHHhCcCCEEEEECC-------------------------------------------CChH
Confidence 755433 2356788899999999999876532 1347
Q ss_pred HHHHHHHHcCceeeEEee
Q 025144 227 DLEKLALEIGFSRAKHYE 244 (257)
Q Consensus 227 ~~~~~l~~~Gf~~~~~~~ 244 (257)
.+++.|.+.||.+++..-
T Consensus 131 ~lr~~L~~~Gf~i~~E~l 148 (230)
T 3lec_A 131 DLRKWLAANDFEIVAEDI 148 (230)
T ss_dssp HHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHCCCEEEEEEE
Confidence 888999999999887553
No 156
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.67 E-value=1.3e-15 Score=121.82 Aligned_cols=115 Identities=23% Similarity=0.251 Sum_probs=95.9
Q ss_pred HHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhh-hhccCCCeeEEEccCCCCCC
Q 025144 59 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLV-SKACYKNIEWVEGDALDLPF 137 (257)
Q Consensus 59 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~-~~~~~~~~~~~~~d~~~~~~ 137 (257)
..+...+...++.+|||+|||+|.++..+++.+++..+++++|+++.+++.+++++... +. ...++.+..+|+.+.++
T Consensus 89 ~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~-~~~~v~~~~~d~~~~~~ 167 (280)
T 1i9g_A 89 AQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQ-PPDNWRLVVSDLADSEL 167 (280)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTS-CCTTEEEECSCGGGCCC
T ss_pred HHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC-CCCcEEEEECchHhcCC
Confidence 45556667888899999999999999999987667789999999999999999987654 20 01589999999988777
Q ss_pred CCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 138 SDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 138 ~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
++++||+|++. .+++..+++++.++|+|||.+++...
T Consensus 168 ~~~~~D~v~~~-----~~~~~~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 168 PDGSVDRAVLD-----MLAPWEVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp CTTCEEEEEEE-----SSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred CCCceeEEEEC-----CcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 67889999983 34667889999999999999988764
No 157
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.67 E-value=1.1e-15 Score=117.41 Aligned_cols=116 Identities=20% Similarity=0.147 Sum_probs=94.6
Q ss_pred HHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC
Q 025144 56 IWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL 135 (257)
Q Consensus 56 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 135 (257)
.....+...+...++.+|||+|||+|..+..+++..++..+++++|+|+.+++.+++++...+. .++.+..+|....
T Consensus 64 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~v~~~~~d~~~~ 140 (215)
T 2yxe_A 64 HMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGY---DNVIVIVGDGTLG 140 (215)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTC---TTEEEEESCGGGC
T ss_pred HHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC---CCeEEEECCcccC
Confidence 3444566667788889999999999999999999865557999999999999999998765432 4689999998653
Q ss_pred CCCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeec
Q 025144 136 PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 136 ~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
...+++||+|++..+++++. .++.++|||||.+++....
T Consensus 141 ~~~~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 141 YEPLAPYDRIYTTAAGPKIP------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp CGGGCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEESS
T ss_pred CCCCCCeeEEEECCchHHHH------HHHHHHcCCCcEEEEEECC
Confidence 22357899999999999886 3789999999999887643
No 158
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.66 E-value=1.1e-15 Score=126.90 Aligned_cols=118 Identities=14% Similarity=0.153 Sum_probs=96.8
Q ss_pred HHHHHHHHhhh--CCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccC
Q 025144 55 RIWKRMAVSWS--GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDA 132 (257)
Q Consensus 55 ~~~~~~~~~~~--~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~ 132 (257)
+.+.+.+...+ ...++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.+++++...+ .++.++.+|+
T Consensus 217 ~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~---g~~V~gvDis~~al~~A~~n~~~~~----~~v~~~~~D~ 289 (381)
T 3dmg_A 217 LLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARM---GAEVVGVEDDLASVLSLQKGLEANA----LKAQALHSDV 289 (381)
T ss_dssp HHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHT---TCEEEEEESBHHHHHHHHHHHHHTT----CCCEEEECST
T ss_pred HHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcC----CCeEEEEcch
Confidence 33444444443 2346779999999999999999986 4699999999999999999986543 3589999999
Q ss_pred CCCCCCCCcccEEEecccccC-----cccHHHHHHHHHhcccCCCEEEEEee
Q 025144 133 LDLPFSDCFFDAITMGYGLRN-----VVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 133 ~~~~~~~~~~D~v~~~~~l~~-----~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
.+...++++||+|+++..+++ .++...+++++.++|||||.+++...
T Consensus 290 ~~~~~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n 341 (381)
T 3dmg_A 290 DEALTEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSN 341 (381)
T ss_dssp TTTSCTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hhccccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEc
Confidence 987666689999999999887 45678899999999999999988753
No 159
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.66 E-value=1.7e-16 Score=130.10 Aligned_cols=132 Identities=19% Similarity=0.156 Sum_probs=95.0
Q ss_pred HhhhhhhhhhhhhhhhhhhhHHHHHHHHHhhhCCCCCCeEEEecCC------CChhHHHHHHHhCCCceEEEEeCChhHH
Q 025144 34 LFSRIAPVYDNLNDLLSFGQHRIWKRMAVSWSGAKTGDNVLDVCCG------SGDLSFLLSEQVGSQGKVIGLDFSKNQL 107 (257)
Q Consensus 34 ~y~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G------~G~~~~~l~~~~~~~~~v~~~D~s~~~~ 107 (257)
.|++.+..|+.............+.+.+ ..+. .++.+||||||| +|..+..+++.+.|+.+|+++|+|+.|.
T Consensus 183 ~fd~lA~~Y~tDK~~~~h~y~~~Ye~lL-~~l~-~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~ 260 (419)
T 3sso_A 183 DLSELSSRYFTPKFGFLHWFTPHYDRHF-RDYR-NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH 260 (419)
T ss_dssp CHHHHHHHTTCTTBSSSCBCHHHHHHHH-GGGT-TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG
T ss_pred cHHHHHHHhCCCcccccchHHHHHHHHH-Hhhc-CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh
Confidence 4556666664432110111223333333 3333 345799999999 7777777777655788999999999972
Q ss_pred HHHHhhhhhhhhccCCCeeEEEccCCCCCCC------CCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeec
Q 025144 108 SMASSRQDLVSKACYKNIEWVEGDALDLPFS------DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 108 ~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~------~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
.. .++++++++|..++++. +++||+|++.. .|++.+....|++++++|||||.+++.++.
T Consensus 261 ------~~------~~rI~fv~GDa~dlpf~~~l~~~d~sFDlVisdg-sH~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 261 ------VD------ELRIRTIQGDQNDAEFLDRIARRYGPFDIVIDDG-SHINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp ------GC------BTTEEEEECCTTCHHHHHHHHHHHCCEEEEEECS-CCCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred ------hc------CCCcEEEEecccccchhhhhhcccCCccEEEECC-cccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 11 16899999999987665 68899999864 577788899999999999999999998766
No 160
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.65 E-value=1.1e-16 Score=124.05 Aligned_cols=148 Identities=19% Similarity=0.183 Sum_probs=88.5
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEE-ccCCCCCCCCCcccEEE
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVE-GDALDLPFSDCFFDAIT 146 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~D~v~ 146 (257)
.++.+|||||||+|.++..+++. + ..+|+++|+|+.|++.++++..........++.+.. .|+.. ..+|.+.
T Consensus 36 ~~g~~VLDiGcGtG~~t~~la~~-g-~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~d~~~ 108 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDVMLQN-G-AKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQ-----GRPSFTS 108 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCS-----CCCSEEE
T ss_pred CCCCEEEEEccCCCHHHHHHHhc-C-CCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCc-----CCCCEEE
Confidence 45679999999999999999887 2 249999999999999887754221100001222222 22221 1234444
Q ss_pred ecccccCcccHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHHHHhccCCHH
Q 025144 147 MGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGK 226 (257)
Q Consensus 147 ~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (257)
+..++.++ ..++++++++|||||.+++.. . +......... ...+.... ...+..+.+
T Consensus 109 ~D~v~~~l---~~~l~~i~rvLkpgG~lv~~~--~---p~~e~~~~~~---------~~~G~~~d------~~~~~~~~~ 165 (232)
T 3opn_A 109 IDVSFISL---DLILPPLYEILEKNGEVAALI--K---PQFEAGREQV---------GKNGIIRD------PKVHQMTIE 165 (232)
T ss_dssp ECCSSSCG---GGTHHHHHHHSCTTCEEEEEE--C---HHHHSCHHHH---------C-CCCCCC------HHHHHHHHH
T ss_pred EEEEhhhH---HHHHHHHHHhccCCCEEEEEE--C---cccccCHHHh---------CcCCeecC------cchhHHHHH
Confidence 44444433 678999999999999998853 1 1111000000 00000000 011223778
Q ss_pred HHHHHHHHcCceeeEEeee
Q 025144 227 DLEKLALEIGFSRAKHYEL 245 (257)
Q Consensus 227 ~~~~~l~~~Gf~~~~~~~~ 245 (257)
++.++++++||++......
T Consensus 166 ~l~~~l~~aGf~v~~~~~~ 184 (232)
T 3opn_A 166 KVLKTATQLGFSVKGLTFS 184 (232)
T ss_dssp HHHHHHHHHTEEEEEEEEC
T ss_pred HHHHHHHHCCCEEEEEEEc
Confidence 9999999999998877654
No 161
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.65 E-value=3.3e-16 Score=116.57 Aligned_cols=117 Identities=17% Similarity=0.121 Sum_probs=94.0
Q ss_pred hCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCC---CCCc
Q 025144 65 SGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF---SDCF 141 (257)
Q Consensus 65 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~ 141 (257)
++..++.+|||+|||. + .+|+|+.|++.|+++.. .++.+.++|+.++++ ++++
T Consensus 8 ~g~~~g~~vL~~~~g~----------------v-~vD~s~~ml~~a~~~~~-------~~~~~~~~d~~~~~~~~~~~~~ 63 (176)
T 2ld4_A 8 FGISAGQFVAVVWDKS----------------S-PVEALKGLVDKLQALTG-------NEGRVSVENIKQLLQSAHKESS 63 (176)
T ss_dssp TTCCTTSEEEEEECTT----------------S-CHHHHHHHHHHHHHHTT-------TTSEEEEEEGGGGGGGCCCSSC
T ss_pred cCCCCCCEEEEecCCc----------------e-eeeCCHHHHHHHHHhcc-------cCcEEEEechhcCccccCCCCC
Confidence 3567889999999986 1 28999999999998863 358999999998776 7889
Q ss_pred ccEEEecccccCc-ccHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHHHHh
Q 025144 142 FDAITMGYGLRNV-VDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIR 220 (257)
Q Consensus 142 ~D~v~~~~~l~~~-~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (257)
||+|++..+++++ +++..++++++++|||||.+++.+........ . .
T Consensus 64 fD~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~-----------------------~---------~ 111 (176)
T 2ld4_A 64 FDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDN-----------------------N---------S 111 (176)
T ss_dssp EEEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEEEESSSCS-----------------------S---------S
T ss_pred EeEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEccccccccc-----------------------c---------c
Confidence 9999999999999 89999999999999999999885432111000 0 0
Q ss_pred ccCCHHHHHHHHHHcCc
Q 025144 221 EFLTGKDLEKLALEIGF 237 (257)
Q Consensus 221 ~~~~~~~~~~~l~~~Gf 237 (257)
...+.+++.++|+++||
T Consensus 112 ~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 112 KVKTASKLCSALTLSGL 128 (176)
T ss_dssp SSCCHHHHHHHHHHTTC
T ss_pred ccCCHHHHHHHHHHCCC
Confidence 12467899999999999
No 162
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.65 E-value=1.3e-15 Score=123.95 Aligned_cols=115 Identities=25% Similarity=0.362 Sum_probs=94.9
Q ss_pred HHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC
Q 025144 56 IWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL 135 (257)
Q Consensus 56 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 135 (257)
.....+...+...++.+|||+|||+|.++..+++..+...+|+++|+|+++++.++++++..+. .++.+..+|..+.
T Consensus 62 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~---~~v~~~~~d~~~~ 138 (317)
T 1dl5_A 62 SLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGI---ENVIFVCGDGYYG 138 (317)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTC---CSEEEEESCGGGC
T ss_pred HHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCeEEEECChhhc
Confidence 3445566667788899999999999999999998853346799999999999999998865443 4699999999875
Q ss_pred CCCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 136 PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 136 ~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
..++++||+|++..+++++. +.+.+.|||||.+++...
T Consensus 139 ~~~~~~fD~Iv~~~~~~~~~------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 139 VPEFSPYDVIFVTVGVDEVP------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp CGGGCCEEEEEECSBBSCCC------HHHHHHEEEEEEEEEEBC
T ss_pred cccCCCeEEEEEcCCHHHHH------HHHHHhcCCCcEEEEEEC
Confidence 44457899999999999886 467889999999988753
No 163
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.65 E-value=3.6e-15 Score=114.13 Aligned_cols=128 Identities=19% Similarity=0.142 Sum_probs=101.5
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCC-cccEE
Q 025144 67 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDC-FFDAI 145 (257)
Q Consensus 67 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~D~v 145 (257)
.+++.+|||||||+|.++..+++. ++..+|+++|+++.+++.|+++++..+.. .++.+..+|..+. ++.+ +||+|
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~gl~--~~i~~~~~d~l~~-l~~~~~~D~I 88 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVER-GQIKSAIAGEVVEGPYQSAVKNVEAHGLK--EKIQVRLANGLAA-FEETDQVSVI 88 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHTTCT--TTEEEEECSGGGG-CCGGGCCCEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCC--ceEEEEECchhhh-cccCcCCCEE
Confidence 456789999999999999999987 46679999999999999999998776543 4799999999652 2223 69999
Q ss_pred EecccccCcccHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHHHHhccCCH
Q 025144 146 TMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTG 225 (257)
Q Consensus 146 ~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (257)
++..+-. .-...++......|+++|.+++... ...
T Consensus 89 viaG~Gg--~~i~~Il~~~~~~L~~~~~lVlq~~-------------------------------------------~~~ 123 (225)
T 3kr9_A 89 TIAGMGG--RLIARILEEGLGKLANVERLILQPN-------------------------------------------NRE 123 (225)
T ss_dssp EEEEECH--HHHHHHHHHTGGGCTTCCEEEEEES-------------------------------------------SCH
T ss_pred EEcCCCh--HHHHHHHHHHHHHhCCCCEEEEECC-------------------------------------------CCH
Confidence 8755422 2257889999999999999877432 134
Q ss_pred HHHHHHHHHcCceeeEEe
Q 025144 226 KDLEKLALEIGFSRAKHY 243 (257)
Q Consensus 226 ~~~~~~l~~~Gf~~~~~~ 243 (257)
+.+++.|.+.||.+++..
T Consensus 124 ~~vr~~L~~~Gf~i~~e~ 141 (225)
T 3kr9_A 124 DDLRIWLQDHGFQIVAES 141 (225)
T ss_dssp HHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHHCCCEEEEEE
Confidence 688899999999988755
No 164
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.65 E-value=4e-15 Score=114.94 Aligned_cols=129 Identities=12% Similarity=0.076 Sum_probs=102.4
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEE
Q 025144 67 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAIT 146 (257)
Q Consensus 67 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 146 (257)
.+++.+|||||||+|.++..+++. ++..+|+++|+++.+++.|+++++..+.. .++.+..+|..+...++++||+|+
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~gl~--~~I~v~~gD~l~~~~~~~~~D~Iv 95 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKN-QTASFAIAGEVVDGPFQSAQKQVRSSGLT--EQIDVRKGNGLAVIEKKDAIDTIV 95 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHTTCT--TTEEEEECSGGGGCCGGGCCCEEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCC--ceEEEEecchhhccCccccccEEE
Confidence 456789999999999999999987 45668999999999999999998776543 469999999987544334699998
Q ss_pred ecccccCcccHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHHHHhccCCHH
Q 025144 147 MGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGK 226 (257)
Q Consensus 147 ~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (257)
+..+-. .-...++....+.|+++|.+++... ...+
T Consensus 96 iagmGg--~lI~~IL~~~~~~L~~~~~lIlq~~-------------------------------------------~~~~ 130 (244)
T 3gnl_A 96 IAGMGG--TLIRTILEEGAAKLAGVTKLILQPN-------------------------------------------IAAW 130 (244)
T ss_dssp EEEECH--HHHHHHHHHTGGGGTTCCEEEEEES-------------------------------------------SCHH
T ss_pred EeCCch--HHHHHHHHHHHHHhCCCCEEEEEcC-------------------------------------------CChH
Confidence 754432 2356788899999999999977531 1346
Q ss_pred HHHHHHHHcCceeeEEe
Q 025144 227 DLEKLALEIGFSRAKHY 243 (257)
Q Consensus 227 ~~~~~l~~~Gf~~~~~~ 243 (257)
.+++.|.+.||.+++..
T Consensus 131 ~lr~~L~~~Gf~i~~E~ 147 (244)
T 3gnl_A 131 QLREWSEQNNWLITSEA 147 (244)
T ss_dssp HHHHHHHHHTEEEEEEE
T ss_pred HHHHHHHHCCCEEEEEE
Confidence 88899999999987644
No 165
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.64 E-value=4.2e-15 Score=121.93 Aligned_cols=117 Identities=26% Similarity=0.410 Sum_probs=89.7
Q ss_pred HHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhh--------ccCCCeeEEE
Q 025144 58 KRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSK--------ACYKNIEWVE 129 (257)
Q Consensus 58 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~--------~~~~~~~~~~ 129 (257)
...++..+...++.+|||+|||+|.++..+++.+++..+++++|+++.+++.|++++...+. ....++.+..
T Consensus 94 ~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~ 173 (336)
T 2b25_A 94 INMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIH 173 (336)
T ss_dssp HHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEE
T ss_pred HHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEE
Confidence 34455566788899999999999999999999876668999999999999999998865320 0015799999
Q ss_pred ccCCCC--CCCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 130 GDALDL--PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 130 ~d~~~~--~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
+|+.+. ++++++||+|++.. .++...+.++.++|+|||.+++...
T Consensus 174 ~d~~~~~~~~~~~~fD~V~~~~-----~~~~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 174 KDISGATEDIKSLTFDAVALDM-----LNPHVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp SCTTCCC-------EEEEEECS-----SSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred CChHHcccccCCCCeeEEEECC-----CCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 999886 45567899999853 2344588999999999999987664
No 166
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.64 E-value=3.9e-16 Score=116.27 Aligned_cols=119 Identities=12% Similarity=0.102 Sum_probs=90.8
Q ss_pred HHHHHhhhC-CCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC-
Q 025144 58 KRMAVSWSG-AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL- 135 (257)
Q Consensus 58 ~~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~- 135 (257)
.+.+...+. ..++.+|||+|||+|..+..+++. +..+++++|+|+.+++.++++++..+.. .++.++.+|+.+.
T Consensus 19 ~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~--~~~~~~~~d~~~~~ 94 (177)
T 2esr_A 19 RGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSR--GMSAAVLVEKNRKAQAIIQDNIIMTKAE--NRFTLLKMEAERAI 94 (177)
T ss_dssp HHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHHHTTTCG--GGEEEECSCHHHHH
T ss_pred HHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcCCC--CceEEEECcHHHhH
Confidence 344444444 566789999999999999999876 3469999999999999999988655432 4789999998773
Q ss_pred CCCCCcccEEEecccccCcccHHHHHHHHH--hcccCCCEEEEEeecC
Q 025144 136 PFSDCFFDAITMGYGLRNVVDKRKALEESF--RVLKPGSRISVLDFNK 181 (257)
Q Consensus 136 ~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~--~~Lk~gG~l~~~~~~~ 181 (257)
+..+++||+|++...++ .......++.+. ++|+|||.+++.....
T Consensus 95 ~~~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 95 DCLTGRFDLVFLDPPYA-KETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp HHBCSCEEEEEECCSSH-HHHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred HhhcCCCCEEEECCCCC-cchHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 33346799999987653 234566677776 9999999998876554
No 167
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.64 E-value=7.9e-16 Score=119.70 Aligned_cols=111 Identities=20% Similarity=0.297 Sum_probs=85.5
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhh---hccCCCeeEEEccCCC-CC--CCCC
Q 025144 67 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVS---KACYKNIEWVEGDALD-LP--FSDC 140 (257)
Q Consensus 67 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~---~~~~~~~~~~~~d~~~-~~--~~~~ 140 (257)
..++.+|||||||+|.++..+++.. ++..++|+|+|+.|++.|+++++... .....++.++++|+.+ ++ ++++
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~ 122 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLF-PDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKG 122 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGS-TTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTT
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCc
Confidence 3456799999999999999999884 67899999999999999998765321 1123689999999987 55 6788
Q ss_pred cccEEEecccccCccc--------HHHHHHHHHhcccCCCEEEEEe
Q 025144 141 FFDAITMGYGLRNVVD--------KRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 141 ~~D~v~~~~~l~~~~~--------~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
++|.|++.+...+... ...+++.+.++|||||.+++..
T Consensus 123 ~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 123 QLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTIT 168 (235)
T ss_dssp CEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEe
Confidence 9999998665433211 1478999999999999998765
No 168
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.64 E-value=1.4e-15 Score=125.10 Aligned_cols=118 Identities=17% Similarity=0.214 Sum_probs=96.7
Q ss_pred HHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC
Q 025144 56 IWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL 135 (257)
Q Consensus 56 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 135 (257)
...+.+...+...++.+|||+|||+|.++..+++. ++..+++++|+|+.+++.+++++...+ ....++.+|..+.
T Consensus 183 ~~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~-~~~~~v~~vD~s~~~l~~a~~~~~~~~----~~~~~~~~d~~~~ 257 (343)
T 2pjd_A 183 VGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARH-SPKIRLTLCDVSAPAVEASRATLAANG----VEGEVFASNVFSE 257 (343)
T ss_dssp HHHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHH-CTTCBCEEEESBHHHHHHHHHHHHHTT----CCCEEEECSTTTT
T ss_pred HHHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHhC----CCCEEEEcccccc
Confidence 34556666665556779999999999999999988 466799999999999999999886543 3467888998764
Q ss_pred CCCCCcccEEEecccccC-----cccHHHHHHHHHhcccCCCEEEEEeec
Q 025144 136 PFSDCFFDAITMGYGLRN-----VVDKRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 136 ~~~~~~~D~v~~~~~l~~-----~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
. +++||+|+++.++|+ .++...++++++++|||||.+++....
T Consensus 258 ~--~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 258 V--KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp C--CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred c--cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 3 678999999999885 345788999999999999999887644
No 169
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.64 E-value=2.2e-15 Score=119.80 Aligned_cols=100 Identities=29% Similarity=0.431 Sum_probs=86.1
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEe
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 147 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 147 (257)
.++.+|||+|||+|.++..+++.+ ++.+++++|+|+.+++.++++. .++.+..+|..++++++++||+|++
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~~~~~fD~v~~ 154 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADAL-PEITTFGLDVSKVAIKAAAKRY--------PQVTFCVASSHRLPFSDTSMDAIIR 154 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTC-TTSEEEEEESCHHHHHHHHHHC--------TTSEEEECCTTSCSBCTTCEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhC--------CCcEEEEcchhhCCCCCCceeEEEE
Confidence 567899999999999999999875 5679999999999999998875 5789999999988877889999998
Q ss_pred cccccCcccHHHHHHHHHhcccCCCEEEEEeecCCC
Q 025144 148 GYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKST 183 (257)
Q Consensus 148 ~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~ 183 (257)
.++.. .++++.++|||||.+++.++....
T Consensus 155 ~~~~~-------~l~~~~~~L~pgG~l~~~~~~~~~ 183 (269)
T 1p91_A 155 IYAPC-------KAEELARVVKPGGWVITATPGPRH 183 (269)
T ss_dssp ESCCC-------CHHHHHHHEEEEEEEEEEEECTTT
T ss_pred eCChh-------hHHHHHHhcCCCcEEEEEEcCHHH
Confidence 76532 478999999999999998876543
No 170
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.64 E-value=9.9e-15 Score=116.65 Aligned_cols=121 Identities=17% Similarity=0.083 Sum_probs=89.9
Q ss_pred HHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeC-ChhHHHHHHhhh-----hhhhhc--cCCCee
Q 025144 55 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDF-SKNQLSMASSRQ-----DLVSKA--CYKNIE 126 (257)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~-s~~~~~~a~~~~-----~~~~~~--~~~~~~ 126 (257)
..+.+.+.......++.+|||+|||+|.++..+++. + ..+|+++|+ |+.+++.++++. +..+.. ...++.
T Consensus 65 ~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~-~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~ 142 (281)
T 3bzb_A 65 RALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLA-G-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPK 142 (281)
T ss_dssp HHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHT-T-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCE
T ss_pred HHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHc-C-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeE
Confidence 334444554444456789999999999999988875 2 348999999 899999999987 322110 002678
Q ss_pred EEEccCCCCC--C----CCCcccEEEecccccCcccHHHHHHHHHhccc---C--CCEEEEE
Q 025144 127 WVEGDALDLP--F----SDCFFDAITMGYGLRNVVDKRKALEESFRVLK---P--GSRISVL 177 (257)
Q Consensus 127 ~~~~d~~~~~--~----~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk---~--gG~l~~~ 177 (257)
+...|..+.. + ++++||+|++..++++.++...+++.+.++|+ | ||.+++.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~ 204 (281)
T 3bzb_A 143 VVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVT 204 (281)
T ss_dssp EEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEE
T ss_pred EEEecCCCccHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEE
Confidence 8877655421 1 35789999999999999999999999999999 9 9987664
No 171
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.64 E-value=5.9e-16 Score=117.72 Aligned_cols=109 Identities=20% Similarity=0.179 Sum_probs=86.4
Q ss_pred CCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC--CCCCc-ccEE
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP--FSDCF-FDAI 145 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~-~D~v 145 (257)
++.+|||+|||+|.++..++.. + ..+|+++|+|+.+++.|+++++..+.. ..++.++++|+.+.. .++++ ||+|
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~-~~~v~~~~~d~~~~~~~~~~~~~fD~I 129 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSR-Q-AKKVTFLELDKTVANQLKKNLQTLKCS-SEQAEVINQSSLDFLKQPQNQPHFDVV 129 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT-T-CSEEEEECSCHHHHHHHHHHHHHTTCC-TTTEEEECSCHHHHTTSCCSSCCEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHc-c-CCEEEEEECCHHHHHHHHHHHHHhCCC-ccceEEEECCHHHHHHhhccCCCCCEE
Confidence 5679999999999999987766 2 358999999999999999988654320 037899999987643 23578 9999
Q ss_pred EecccccCcccHHHHHHHH--HhcccCCCEEEEEeecC
Q 025144 146 TMGYGLRNVVDKRKALEES--FRVLKPGSRISVLDFNK 181 (257)
Q Consensus 146 ~~~~~l~~~~~~~~~l~~~--~~~Lk~gG~l~~~~~~~ 181 (257)
++...++ ..+....++.+ .++|+|||.+++.....
T Consensus 130 ~~~~~~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 130 FLDPPFH-FNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp EECCCSS-SCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred EECCCCC-CccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 9988754 55677888888 67899999998876543
No 172
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.63 E-value=1e-15 Score=114.91 Aligned_cols=120 Identities=17% Similarity=0.105 Sum_probs=91.7
Q ss_pred HHHHHHhhh-CCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC
Q 025144 57 WKRMAVSWS-GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL 135 (257)
Q Consensus 57 ~~~~~~~~~-~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 135 (257)
+.+.+...+ ...++.+|||+|||+|..+..+++. +..+++++|+|+.+++.++++....+.. +++.++++|+.+.
T Consensus 31 ~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~--~~~~~~~~d~~~~ 106 (187)
T 2fhp_A 31 VKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSR--GMDKSICIEKNFAALKVIKENIAITKEP--EKFEVRKMDANRA 106 (187)
T ss_dssp HHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHTCG--GGEEEEESCHHHH
T ss_pred HHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHhCCC--cceEEEECcHHHH
Confidence 344444444 3456789999999999999988875 3469999999999999999988655422 4799999998763
Q ss_pred C----CCCCcccEEEecccccCcccHHHHHHHH--HhcccCCCEEEEEeecC
Q 025144 136 P----FSDCFFDAITMGYGLRNVVDKRKALEES--FRVLKPGSRISVLDFNK 181 (257)
Q Consensus 136 ~----~~~~~~D~v~~~~~l~~~~~~~~~l~~~--~~~Lk~gG~l~~~~~~~ 181 (257)
. .++++||+|++...++ ..+....+..+ .++|+|||.+++.....
T Consensus 107 ~~~~~~~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 107 LEQFYEEKLQFDLVLLDPPYA-KQEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp HHHHHHTTCCEEEEEECCCGG-GCCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred HHHHHhcCCCCCEEEECCCCC-chhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 2 1257899999987754 34566777777 88999999998876554
No 173
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.63 E-value=3e-15 Score=116.28 Aligned_cols=112 Identities=17% Similarity=0.162 Sum_probs=92.4
Q ss_pred HHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC
Q 025144 56 IWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL 135 (257)
Q Consensus 56 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 135 (257)
.....+...+...++.+|||+|||+|..+..+++. ..+++++|+|+.+++.++++.... .++.++.+|+.+.
T Consensus 57 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~-----~~v~~~~~d~~~~ 128 (231)
T 1vbf_A 57 NLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEI---VDKVVSVEINEKMYNYASKLLSYY-----NNIKLILGDGTLG 128 (231)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHTTC-----SSEEEEESCGGGC
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHH---cCEEEEEeCCHHHHHHHHHHHhhc-----CCeEEEECCcccc
Confidence 44455666677788899999999999999999987 279999999999999999987543 2789999999873
Q ss_pred CCCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeecC
Q 025144 136 PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNK 181 (257)
Q Consensus 136 ~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 181 (257)
...+++||+|++..+++++.+ .+.++|+|||.+++.....
T Consensus 129 ~~~~~~fD~v~~~~~~~~~~~------~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 129 YEEEKPYDRVVVWATAPTLLC------KPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp CGGGCCEEEEEESSBBSSCCH------HHHHTEEEEEEEEEEECSS
T ss_pred cccCCCccEEEECCcHHHHHH------HHHHHcCCCcEEEEEEcCC
Confidence 324578999999999998863 6889999999998876543
No 174
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.63 E-value=1.5e-15 Score=125.04 Aligned_cols=120 Identities=21% Similarity=0.212 Sum_probs=93.1
Q ss_pred hhhHHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEc
Q 025144 51 FGQHRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEG 130 (257)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~ 130 (257)
......+++.+.+.....++++|||||||+|.++...++. + -.+|+++|.|+ |++.|++.++..+.. .++.++++
T Consensus 65 ~~Rt~aY~~Ai~~~~~~~~~k~VLDvG~GtGiLs~~Aa~a-G-A~~V~ave~s~-~~~~a~~~~~~n~~~--~~i~~i~~ 139 (376)
T 4hc4_A 65 RVRTDAYRLGILRNWAALRGKTVLDVGAGTGILSIFCAQA-G-ARRVYAVEASA-IWQQAREVVRFNGLE--DRVHVLPG 139 (376)
T ss_dssp HHHHHHHHHHHHTTHHHHTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEECST-THHHHHHHHHHTTCT--TTEEEEES
T ss_pred HHHHHHHHHHHHhCHHhcCCCEEEEeCCCccHHHHHHHHh-C-CCEEEEEeChH-HHHHHHHHHHHcCCC--ceEEEEee
Confidence 3456666676665544557889999999999998877765 2 24899999986 889998887765543 67999999
Q ss_pred cCCCCCCCCCcccEEEec---ccccCcccHHHHHHHHHhcccCCCEEEE
Q 025144 131 DALDLPFSDCFFDAITMG---YGLRNVVDKRKALEESFRVLKPGSRISV 176 (257)
Q Consensus 131 d~~~~~~~~~~~D~v~~~---~~l~~~~~~~~~l~~~~~~Lk~gG~l~~ 176 (257)
|++++.++ +++|+|++- ..+.+-.....++....+.|||||.++-
T Consensus 140 ~~~~~~lp-e~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 140 PVETVELP-EQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp CTTTCCCS-SCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred eeeeecCC-ccccEEEeecccccccccchhhhHHHHHHhhCCCCceECC
Confidence 99998776 789999983 3344445678888889999999998863
No 175
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.63 E-value=1.7e-15 Score=116.77 Aligned_cols=117 Identities=8% Similarity=0.151 Sum_probs=91.5
Q ss_pred HHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC--
Q 025144 59 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-- 136 (257)
Q Consensus 59 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-- 136 (257)
..+....+..++.+|||||||+|..+..+++.++++.+++++|+++++++.|+++++..+.. ..++.++++|..+..
T Consensus 46 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~-~~~i~~~~gda~~~l~~ 124 (221)
T 3dr5_A 46 TTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYS-PSRVRFLLSRPLDVMSR 124 (221)
T ss_dssp HHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCC-GGGEEEECSCHHHHGGG
T ss_pred HHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-cCcEEEEEcCHHHHHHH
Confidence 33444444444559999999999999999998766789999999999999999998765421 037999999987642
Q ss_pred CCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 137 FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 137 ~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
+++++||+|++... ..+....++.+.++|||||.+++.+.
T Consensus 125 ~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~dn~ 164 (221)
T 3dr5_A 125 LANDSYQLVFGQVS---PMDLKALVDAAWPLLRRGGALVLADA 164 (221)
T ss_dssp SCTTCEEEEEECCC---TTTHHHHHHHHHHHEEEEEEEEETTT
T ss_pred hcCCCcCeEEEcCc---HHHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 33688999998754 34567789999999999999987543
No 176
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.63 E-value=6.3e-15 Score=122.32 Aligned_cols=149 Identities=22% Similarity=0.229 Sum_probs=112.8
Q ss_pred HHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCC
Q 025144 55 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD 134 (257)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 134 (257)
+.+...+.... ..++.+|||+|||+|.++..++.. ++..+++|+|+|+.|++.|++++...+.. .++.+.++|+.+
T Consensus 204 ~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~-~~~~~v~g~Dis~~~l~~A~~n~~~~gl~--~~i~~~~~D~~~ 279 (373)
T 3tm4_A 204 ASIANAMIELA-ELDGGSVLDPMCGSGTILIELALR-RYSGEIIGIEKYRKHLIGAEMNALAAGVL--DKIKFIQGDATQ 279 (373)
T ss_dssp HHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHT-TCCSCEEEEESCHHHHHHHHHHHHHTTCG--GGCEEEECCGGG
T ss_pred HHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHHcCCC--CceEEEECChhh
Confidence 34445555555 678889999999999999999987 34458999999999999999998765532 479999999999
Q ss_pred CCCCCCcccEEEecccccCc-------cc-HHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccC
Q 025144 135 LPFSDCFFDAITMGYGLRNV-------VD-KRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGY 206 (257)
Q Consensus 135 ~~~~~~~~D~v~~~~~l~~~-------~~-~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (257)
++.++++||+|+++..+... .+ ...+++.+.++| +|.++++..
T Consensus 280 ~~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~--------------------------- 330 (373)
T 3tm4_A 280 LSQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT--------------------------- 330 (373)
T ss_dssp GGGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEES---------------------------
T ss_pred CCcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC---------------------------
Confidence 88777899999998765432 12 256788888888 555544431
Q ss_pred CchhhhhhhHHHHhccCCHHHHHHHHHHcCceeeEEeeecCceeEEE
Q 025144 207 GLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYELSGGLMGNL 253 (257)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~g~~~~~ 253 (257)
+.+.+++.+++.||+..+......|...+.
T Consensus 331 -----------------~~~~~~~~~~~~G~~~~~~~~~~nG~l~~~ 360 (373)
T 3tm4_A 331 -----------------EKKAIEEAIAENGFEIIHHRVIGHGGLMVH 360 (373)
T ss_dssp -----------------CHHHHHHHHHHTTEEEEEEEEEEETTEEEE
T ss_pred -----------------CHHHHHHHHHHcCCEEEEEEEEEcCCEEEE
Confidence 346777889999999998888776655443
No 177
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.63 E-value=7.9e-15 Score=116.43 Aligned_cols=145 Identities=12% Similarity=0.105 Sum_probs=94.6
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeE-EEccCCCCC---CCCCccc
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEW-VEGDALDLP---FSDCFFD 143 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~-~~~d~~~~~---~~~~~~D 143 (257)
.++.+|||+|||||.++..+++. ...+|+++|+|+.|++.+.++- +++.. ...++..+. ++..+||
T Consensus 84 ~~g~~vLDiGcGTG~~t~~L~~~--ga~~V~aVDvs~~mL~~a~r~~--------~rv~~~~~~ni~~l~~~~l~~~~fD 153 (291)
T 3hp7_A 84 VEDMITIDIGASTGGFTDVMLQN--GAKLVYAVDVGTNQLVWKLRQD--------DRVRSMEQYNFRYAEPVDFTEGLPS 153 (291)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCSEEEEECSSSSCSCHHHHTC--------TTEEEECSCCGGGCCGGGCTTCCCS
T ss_pred ccccEEEecCCCccHHHHHHHhC--CCCEEEEEECCHHHHHHHHHhC--------cccceecccCceecchhhCCCCCCC
Confidence 35679999999999999999876 2459999999999998854432 23322 223333322 3344699
Q ss_pred EEEecccccCcccHHHHHHHHHhcccCCCEEEEEeec-CCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHHHHhcc
Q 025144 144 AITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN-KSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREF 222 (257)
Q Consensus 144 ~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (257)
+|++..+++++ ..+|.+++++|||||.+++.... ...... .. +..+... ....+.
T Consensus 154 ~v~~d~sf~sl---~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~--------------~~-~~~G~vr------d~~~~~ 209 (291)
T 3hp7_A 154 FASIDVSFISL---NLILPALAKILVDGGQVVALVKPQFEAGRE--------------QI-GKNGIVR------ESSIHE 209 (291)
T ss_dssp EEEECCSSSCG---GGTHHHHHHHSCTTCEEEEEECGGGTSCGG--------------GC-C-CCCCC------CHHHHH
T ss_pred EEEEEeeHhhH---HHHHHHHHHHcCcCCEEEEEECcccccChh--------------hc-CCCCccC------CHHHHH
Confidence 99998887754 77899999999999999886311 000000 00 0000000 011123
Q ss_pred CCHHHHHHHHHHcCceeeEEeeec
Q 025144 223 LTGKDLEKLALEIGFSRAKHYELS 246 (257)
Q Consensus 223 ~~~~~~~~~l~~~Gf~~~~~~~~~ 246 (257)
...+++.++++++||++......+
T Consensus 210 ~~~~~v~~~~~~~Gf~v~~~~~sp 233 (291)
T 3hp7_A 210 KVLETVTAFAVDYGFSVKGLDFSP 233 (291)
T ss_dssp HHHHHHHHHHHHTTEEEEEEEECS
T ss_pred HHHHHHHHHHHHCCCEEEEEEECC
Confidence 467899999999999988776653
No 178
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.62 E-value=2.6e-15 Score=111.50 Aligned_cols=104 Identities=23% Similarity=0.295 Sum_probs=87.4
Q ss_pred CCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC--------C
Q 025144 66 GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP--------F 137 (257)
Q Consensus 66 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~--------~ 137 (257)
...++.+|||+|||+|..+..+++.++++.+++++|+++ +++. .++.+..+|+.+.+ +
T Consensus 19 ~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-------------~~~~~~~~d~~~~~~~~~~~~~~ 84 (180)
T 1ej0_A 19 LFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-------------VGVDFLQGDFRDELVMKALLERV 84 (180)
T ss_dssp CCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-------------TTEEEEESCTTSHHHHHHHHHHH
T ss_pred CCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-------------CcEEEEEcccccchhhhhhhccC
Confidence 367788999999999999999999876668999999999 6431 47899999998865 6
Q ss_pred CCCcccEEEecccccCcccH-----------HHHHHHHHhcccCCCEEEEEeecCCC
Q 025144 138 SDCFFDAITMGYGLRNVVDK-----------RKALEESFRVLKPGSRISVLDFNKST 183 (257)
Q Consensus 138 ~~~~~D~v~~~~~l~~~~~~-----------~~~l~~~~~~Lk~gG~l~~~~~~~~~ 183 (257)
++++||+|++..++++..+. ..+++++.++|+|||.+++..+....
T Consensus 85 ~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 141 (180)
T 1ej0_A 85 GDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEG 141 (180)
T ss_dssp TTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTT
T ss_pred CCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCc
Confidence 67899999999888877654 68899999999999999987766543
No 179
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.62 E-value=4.9e-15 Score=123.97 Aligned_cols=121 Identities=17% Similarity=0.148 Sum_probs=92.4
Q ss_pred HHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHH-------HhhhhhhhhccCCCeeEEE
Q 025144 57 WKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMA-------SSRQDLVSKACYKNIEWVE 129 (257)
Q Consensus 57 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a-------~~~~~~~~~~~~~~~~~~~ 129 (257)
+...+...+...++.+|||||||+|..+..+++.. +..+|+|+|+++.+++.| ++++...+.. ..++.+++
T Consensus 230 ~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~-g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~-~~nV~~i~ 307 (433)
T 1u2z_A 230 FLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALEC-GCALSFGCEIMDDASDLTILQYEELKKRCKLYGMR-LNNVEFSL 307 (433)
T ss_dssp HHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHH-CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBC-CCCEEEEE
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCC-CCceEEEE
Confidence 33445566677888999999999999999999876 345899999999999988 6665543310 15889998
Q ss_pred ccCCCC--CC--CCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeec
Q 025144 130 GDALDL--PF--SDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 130 ~d~~~~--~~--~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
+|.... ++ ..++||+|+++..+ +.+++...|+++.++|||||.+++.+..
T Consensus 308 gD~~~~~~~~~~~~~~FDvIvvn~~l-~~~d~~~~L~el~r~LKpGG~lVi~d~f 361 (433)
T 1u2z_A 308 KKSFVDNNRVAELIPQCDVILVNNFL-FDEDLNKKVEKILQTAKVGCKIISLKSL 361 (433)
T ss_dssp SSCSTTCHHHHHHGGGCSEEEECCTT-CCHHHHHHHHHHHTTCCTTCEEEESSCS
T ss_pred cCccccccccccccCCCCEEEEeCcc-ccccHHHHHHHHHHhCCCCeEEEEeecc
Confidence 765432 11 24689999987766 4467888899999999999999887543
No 180
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.62 E-value=1e-15 Score=118.98 Aligned_cols=117 Identities=15% Similarity=0.159 Sum_probs=93.0
Q ss_pred HHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC-C
Q 025144 58 KRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-P 136 (257)
Q Consensus 58 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-~ 136 (257)
...+..++...++.+|||+|||+|..+..+++. .+..+|+++|+++.+++.|+++++..+.. .++.++.+|+.+. +
T Consensus 60 ~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~ 136 (232)
T 3ntv_A 60 LDLIKQLIRMNNVKNILEIGTAIGYSSMQFASI-SDDIHVTTIERNETMIQYAKQNLATYHFE--NQVRIIEGNALEQFE 136 (232)
T ss_dssp HHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTT-CTTCEEEEEECCHHHHHHHHHHHHHTTCT--TTEEEEESCGGGCHH
T ss_pred HHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCC--CcEEEEECCHHHHHH
Confidence 344444444557789999999999999999985 35789999999999999999998765432 4899999999774 2
Q ss_pred -CCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeec
Q 025144 137 -FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 137 -~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
..+++||+|++... ..+...+++.+.++|||||.+++.+..
T Consensus 137 ~~~~~~fD~V~~~~~---~~~~~~~l~~~~~~LkpgG~lv~d~~~ 178 (232)
T 3ntv_A 137 NVNDKVYDMIFIDAA---KAQSKKFFEIYTPLLKHQGLVITDNVL 178 (232)
T ss_dssp HHTTSCEEEEEEETT---SSSHHHHHHHHGGGEEEEEEEEEECTT
T ss_pred hhccCCccEEEEcCc---HHHHHHHHHHHHHhcCCCeEEEEeeCC
Confidence 22578999997653 445678999999999999999875543
No 181
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.62 E-value=7.1e-15 Score=113.77 Aligned_cols=115 Identities=27% Similarity=0.289 Sum_probs=90.9
Q ss_pred HHHhhhC--CCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhh--ccCCCeeEEEccCCCC
Q 025144 60 MAVSWSG--AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSK--ACYKNIEWVEGDALDL 135 (257)
Q Consensus 60 ~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~~~~~d~~~~ 135 (257)
.+...+. ..++.+|||+|||+|..+..+++..++..+|+++|+++.+++.++++....+. ....++.+..+|....
T Consensus 66 ~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 145 (226)
T 1i1n_A 66 YALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG 145 (226)
T ss_dssp HHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC
T ss_pred HHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccC
Confidence 3444443 67788999999999999999998875557999999999999999988765321 0015899999999865
Q ss_pred CCCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeec
Q 025144 136 PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 136 ~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
...+++||+|++...++++. +++.++|||||.+++....
T Consensus 146 ~~~~~~fD~i~~~~~~~~~~------~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 146 YAEEAPYDAIHVGAAAPVVP------QALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp CGGGCCEEEEEECSBBSSCC------HHHHHTEEEEEEEEEEESC
T ss_pred cccCCCcCEEEECCchHHHH------HHHHHhcCCCcEEEEEEec
Confidence 54467899999988887653 5788999999999887643
No 182
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.62 E-value=1.6e-15 Score=115.42 Aligned_cols=106 Identities=13% Similarity=0.056 Sum_probs=85.2
Q ss_pred CCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCC-CCCCCCcccEEEe
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD-LPFSDCFFDAITM 147 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~ 147 (257)
++.+|||+|||+|..+..++... ..+|+++|+|+.|++.++++++..+. .++.++++|+.+ ++..+++||+|++
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~--~~~V~~vD~s~~~l~~a~~~~~~~~~---~~v~~~~~D~~~~~~~~~~~fD~V~~ 128 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY--AAGATLIEMDRAVSQQLIKNLATLKA---GNARVVNSNAMSFLAQKGTPHNIVFV 128 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTC---CSEEEECSCHHHHHSSCCCCEEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC--CCEEEEEECCHHHHHHHHHHHHHcCC---CcEEEEECCHHHHHhhcCCCCCEEEE
Confidence 56799999999999999877762 34899999999999999998865442 489999999876 3445678999999
Q ss_pred cccccCcccHHHHHHHHHh--cccCCCEEEEEeec
Q 025144 148 GYGLRNVVDKRKALEESFR--VLKPGSRISVLDFN 180 (257)
Q Consensus 148 ~~~l~~~~~~~~~l~~~~~--~Lk~gG~l~~~~~~ 180 (257)
...++ .......++.+.+ +|+|||.+++....
T Consensus 129 ~~p~~-~~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 129 DPPFR-RGLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp CCSSS-TTTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred CCCCC-CCcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 87754 4566778888865 59999999876644
No 183
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.62 E-value=1.7e-16 Score=124.14 Aligned_cols=116 Identities=17% Similarity=0.145 Sum_probs=92.7
Q ss_pred HHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-CC-
Q 025144 61 AVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-FS- 138 (257)
Q Consensus 61 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-~~- 138 (257)
+..+....++.+|||||||+|..+..+++.++++.+|+++|+++.+++.|+++++..+.. .++.++.+|..+.. ..
T Consensus 52 l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~--~~i~~~~gda~~~l~~~~ 129 (242)
T 3r3h_A 52 MQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQE--HKIKLRLGPALDTLHSLL 129 (242)
T ss_dssp HHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCT--TTEEEEESCHHHHHHHHH
T ss_pred HHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC--CcEEEEEcCHHHHHHHHh
Confidence 333333445679999999999999999998755789999999999999999988765543 58999999987642 11
Q ss_pred ----CCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeecC
Q 025144 139 ----DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNK 181 (257)
Q Consensus 139 ----~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 181 (257)
+++||+|++... ..+....++.+.++|||||.+++.+...
T Consensus 130 ~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~~ 173 (242)
T 3r3h_A 130 NEGGEHQFDFIFIDAD---KTNYLNYYELALKLVTPKGLIAIDNIFW 173 (242)
T ss_dssp HHHCSSCEEEEEEESC---GGGHHHHHHHHHHHEEEEEEEEEECSSS
T ss_pred hccCCCCEeEEEEcCC---hHHhHHHHHHHHHhcCCCeEEEEECCcc
Confidence 478999998764 4466788999999999999998876554
No 184
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.61 E-value=1.4e-15 Score=117.54 Aligned_cols=116 Identities=20% Similarity=0.217 Sum_probs=90.8
Q ss_pred HHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC--CC
Q 025144 61 AVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP--FS 138 (257)
Q Consensus 61 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~--~~ 138 (257)
+..+....++.+|||||||+|..+..+++.++++.+++++|+++.+++.+++++...+.. .++.++++|..+.. ++
T Consensus 50 l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~~~ 127 (223)
T 3duw_A 50 LQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLN--DRVEVRTGLALDSLQQIE 127 (223)
T ss_dssp HHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCT--TTEEEEESCHHHHHHHHH
T ss_pred HHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC--CcEEEEEcCHHHHHHHHH
Confidence 333334456789999999999999999988644789999999999999999998765432 46999999986531 11
Q ss_pred ---CCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeecC
Q 025144 139 ---DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNK 181 (257)
Q Consensus 139 ---~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 181 (257)
.++||+|++... .+.....++.+.++|+|||.+++.+...
T Consensus 128 ~~~~~~fD~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 170 (223)
T 3duw_A 128 NEKYEPFDFIFIDAD---KQNNPAYFEWALKLSRPGTVIIGDNVVR 170 (223)
T ss_dssp HTTCCCCSEEEECSC---GGGHHHHHHHHHHTCCTTCEEEEESCSG
T ss_pred hcCCCCcCEEEEcCC---cHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 257999998765 3456789999999999999988765443
No 185
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.61 E-value=1.5e-15 Score=118.23 Aligned_cols=118 Identities=14% Similarity=0.182 Sum_probs=94.3
Q ss_pred HHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC-
Q 025144 57 WKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL- 135 (257)
Q Consensus 57 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~- 135 (257)
....+...+...++.+|||+|||+|..+..+++.+ ++.+++++|+++.+++.|++++...+.. .++.++.+|..+.
T Consensus 42 ~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~ 118 (233)
T 2gpy_A 42 GMESLLHLLKMAAPARILEIGTAIGYSAIRMAQAL-PEATIVSIERDERRYEEAHKHVKALGLE--SRIELLFGDALQLG 118 (233)
T ss_dssp HHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHC-TTCEEEEECCCHHHHHHHHHHHHHTTCT--TTEEEECSCGGGSH
T ss_pred HHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCC--CcEEEEECCHHHHH
Confidence 33444444445567899999999999999999985 5789999999999999999998665432 4799999999874
Q ss_pred CCC--CCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeec
Q 025144 136 PFS--DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 136 ~~~--~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
+.. +++||+|++....+ +...+++.+.++|+|||.+++.+..
T Consensus 119 ~~~~~~~~fD~I~~~~~~~---~~~~~l~~~~~~L~pgG~lv~~~~~ 162 (233)
T 2gpy_A 119 EKLELYPLFDVLFIDAAKG---QYRRFFDMYSPMVRPGGLILSDNVL 162 (233)
T ss_dssp HHHTTSCCEEEEEEEGGGS---CHHHHHHHHGGGEEEEEEEEEETTT
T ss_pred HhcccCCCccEEEECCCHH---HHHHHHHHHHHHcCCCeEEEEEcCC
Confidence 222 47899999877643 6788999999999999999887544
No 186
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.61 E-value=2.4e-14 Score=114.73 Aligned_cols=110 Identities=14% Similarity=0.102 Sum_probs=83.0
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhh--ccCCCeeEEEccCCCC-CCCCCcccE
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSK--ACYKNIEWVEGDALDL-PFSDCFFDA 144 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~~~~~d~~~~-~~~~~~~D~ 144 (257)
+++.+|||||||+|..+..+++. .+..+|+++|+|+.+++.|++++..... -..++++++.+|..+. ...+++||+
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDv 160 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRH-KNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTC-TTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhC-CCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccE
Confidence 44679999999999999999986 3567899999999999999998765321 0125899999999874 334678999
Q ss_pred EEecccccCccc----HHHHHHHHHhcccCCCEEEEEe
Q 025144 145 ITMGYGLRNVVD----KRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 145 v~~~~~l~~~~~----~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
|++.......+. ...+++.++++|+|||.+++..
T Consensus 161 Ii~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 161 IISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EEECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 999654332221 1678999999999999998765
No 187
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.61 E-value=1.3e-15 Score=117.79 Aligned_cols=113 Identities=17% Similarity=0.197 Sum_probs=90.1
Q ss_pred hhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC-C-CC---
Q 025144 64 WSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-P-FS--- 138 (257)
Q Consensus 64 ~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-~-~~--- 138 (257)
+....++.+|||+|||+|..+..+++.++++.+|+++|+++.+++.++++++..+.. .++.++++|..+. + ..
T Consensus 59 l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~ 136 (225)
T 3tr6_A 59 LVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLS--DKIGLRLSPAKDTLAELIHAG 136 (225)
T ss_dssp HHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCT--TTEEEEESCHHHHHHHHHTTT
T ss_pred HHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCC--CceEEEeCCHHHHHHHhhhcc
Confidence 334446779999999999999999988644789999999999999999998765432 4699999998653 1 11
Q ss_pred -CCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeecC
Q 025144 139 -DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNK 181 (257)
Q Consensus 139 -~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 181 (257)
.++||+|++... ..+...+++.+.++|||||.+++.+...
T Consensus 137 ~~~~fD~v~~~~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 177 (225)
T 3tr6_A 137 QAWQYDLIYIDAD---KANTDLYYEESLKLLREGGLIAVDNVLR 177 (225)
T ss_dssp CTTCEEEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred CCCCccEEEECCC---HHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 178999997653 4467889999999999999998876543
No 188
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.60 E-value=2e-15 Score=115.63 Aligned_cols=108 Identities=18% Similarity=0.186 Sum_probs=87.6
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC-CCCCCcccEEE
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-PFSDCFFDAIT 146 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~D~v~ 146 (257)
.++.+|||+|||+|..+..+++.++++.+++++|+|+.+++.++++++..+.. .++.++++|..+. +..++ ||+|+
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~-fD~v~ 131 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLI--DRVELQVGDPLGIAAGQRD-IDILF 131 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGG--GGEEEEESCHHHHHTTCCS-EEEEE
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCC--ceEEEEEecHHHHhccCCC-CCEEE
Confidence 35679999999999999999988643789999999999999999988655432 4799999998753 33346 99999
Q ss_pred ecccccCcccHHHHHHHHHhcccCCCEEEEEeecC
Q 025144 147 MGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNK 181 (257)
Q Consensus 147 ~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 181 (257)
+... ..+...+++++.++|||||.+++.+...
T Consensus 132 ~~~~---~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 163 (210)
T 3c3p_A 132 MDCD---VFNGADVLERMNRCLAKNALLIAVNALR 163 (210)
T ss_dssp EETT---TSCHHHHHHHHGGGEEEEEEEEEESSSS
T ss_pred EcCC---hhhhHHHHHHHHHhcCCCeEEEEECccc
Confidence 8743 4567889999999999999998765443
No 189
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.60 E-value=4.8e-15 Score=116.56 Aligned_cols=114 Identities=20% Similarity=0.190 Sum_probs=86.0
Q ss_pred hCCCCCCeEEEecCCCChhHHHHHHHh-CCCceEEEEeCChhHHHHHHhhhhhh---hhccCCC----------------
Q 025144 65 SGAKTGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLV---SKACYKN---------------- 124 (257)
Q Consensus 65 ~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~---~~~~~~~---------------- 124 (257)
+...++.+|||+|||+|.++..+++.+ .+..+++++|+|+.+++.|++++... +.. .+
T Consensus 47 ~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 124 (250)
T 1o9g_A 47 LPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLT--ARELERREQSERFGKPSY 124 (250)
T ss_dssp SSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHH--HHHHHHHHHHHHHCCHHH
T ss_pred cccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhcccc--ccchhhhhhhhhcccccc
Confidence 333456799999999999999998872 14579999999999999999876543 211 11
Q ss_pred ---------ee-------------EEEccCCCCCC-----CCCcccEEEecccccCcc---------cHHHHHHHHHhcc
Q 025144 125 ---------IE-------------WVEGDALDLPF-----SDCFFDAITMGYGLRNVV---------DKRKALEESFRVL 168 (257)
Q Consensus 125 ---------~~-------------~~~~d~~~~~~-----~~~~~D~v~~~~~l~~~~---------~~~~~l~~~~~~L 168 (257)
+. +.++|+.+... ..++||+|+++..+.... ....+++++.++|
T Consensus 125 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~L 204 (250)
T 1o9g_A 125 LEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASAL 204 (250)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHS
T ss_pred hhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhc
Confidence 56 99999887431 345899999987665543 2458899999999
Q ss_pred cCCCEEEEEeec
Q 025144 169 KPGSRISVLDFN 180 (257)
Q Consensus 169 k~gG~l~~~~~~ 180 (257)
+|||.+++....
T Consensus 205 kpgG~l~~~~~~ 216 (250)
T 1o9g_A 205 PAHAVIAVTDRS 216 (250)
T ss_dssp CTTCEEEEEESS
T ss_pred CCCcEEEEeCcc
Confidence 999999885433
No 190
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.59 E-value=8.2e-15 Score=113.49 Aligned_cols=115 Identities=18% Similarity=0.230 Sum_probs=91.1
Q ss_pred HHHhhh--CCCCCCeEEEecCCCChhHHHHHHHhC----CCceEEEEeCChhHHHHHHhhhhhhhh--ccCCCeeEEEcc
Q 025144 60 MAVSWS--GAKTGDNVLDVCCGSGDLSFLLSEQVG----SQGKVIGLDFSKNQLSMASSRQDLVSK--ACYKNIEWVEGD 131 (257)
Q Consensus 60 ~~~~~~--~~~~~~~vLdiG~G~G~~~~~l~~~~~----~~~~v~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~~~~~d 131 (257)
.+...+ ...++.+|||+|||+|..+..+++..+ +..+|+++|+++.+++.++++++..+. ....++.++.+|
T Consensus 69 ~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 148 (227)
T 2pbf_A 69 LSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKN 148 (227)
T ss_dssp HHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECC
T ss_pred HHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECC
Confidence 344444 467788999999999999999998864 456999999999999999998765431 001589999999
Q ss_pred CCCCC----CCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeec
Q 025144 132 ALDLP----FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 132 ~~~~~----~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
..+.. ...++||+|++...++++ ++.+.+.|||||.+++....
T Consensus 149 ~~~~~~~~~~~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 149 IYQVNEEEKKELGLFDAIHVGASASEL------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp GGGCCHHHHHHHCCEEEEEECSBBSSC------CHHHHHHEEEEEEEEEEEEE
T ss_pred hHhcccccCccCCCcCEEEECCchHHH------HHHHHHhcCCCcEEEEEEcc
Confidence 98754 445789999999888865 36788999999999887543
No 191
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.59 E-value=1.1e-14 Score=116.41 Aligned_cols=118 Identities=18% Similarity=0.147 Sum_probs=89.6
Q ss_pred HHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCC
Q 025144 54 HRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDAL 133 (257)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~ 133 (257)
.+.+.+.+...+...++.+|||+|||+|.++..+++. +..+++++|+|+.+++.|+++.+..+.. .++.++++|+.
T Consensus 108 te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~--~~~~v~~vDis~~al~~A~~n~~~~~l~--~~v~~~~~D~~ 183 (284)
T 1nv8_A 108 TEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF--SDAIVFATDVSSKAVEIARKNAERHGVS--DRFFVRKGEFL 183 (284)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH--SSCEEEEEESCHHHHHHHHHHHHHTTCT--TSEEEEESSTT
T ss_pred HHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCC--CceEEEECcch
Confidence 3445555555544345679999999999999999988 6789999999999999999998765432 35999999998
Q ss_pred CCCCCCCcc---cEEEeccccc-----------Ccc--------cHHHHHHHHH-hcccCCCEEEEE
Q 025144 134 DLPFSDCFF---DAITMGYGLR-----------NVV--------DKRKALEESF-RVLKPGSRISVL 177 (257)
Q Consensus 134 ~~~~~~~~~---D~v~~~~~l~-----------~~~--------~~~~~l~~~~-~~Lk~gG~l~~~ 177 (257)
+. ++ ++| |+|+++.... |.+ +...+++++. +.|+|||.+++.
T Consensus 184 ~~-~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 184 EP-FK-EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp GG-GG-GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred hh-cc-cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 73 22 578 9999973322 111 1237899999 999999999763
No 192
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.59 E-value=1.3e-14 Score=112.97 Aligned_cols=114 Identities=22% Similarity=0.258 Sum_probs=91.5
Q ss_pred HHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC
Q 025144 56 IWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL 135 (257)
Q Consensus 56 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 135 (257)
.....+...+...++.+|||+|||+|.++..+++.. + .+|+++|+++.+++.++++++..+. .++.+..+|...
T Consensus 78 ~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~-~-~~v~~vD~~~~~~~~a~~~~~~~~~---~~v~~~~~d~~~- 151 (235)
T 1jg1_A 78 HMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIV-K-TDVYTIERIPELVEFAKRNLERAGV---KNVHVILGDGSK- 151 (235)
T ss_dssp HHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHH-C-SCEEEEESCHHHHHHHHHHHHHTTC---CSEEEEESCGGG-
T ss_pred HHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHh-C-CEEEEEeCCHHHHHHHHHHHHHcCC---CCcEEEECCccc-
Confidence 344556666778888999999999999999999985 3 7999999999999999998865442 468999999732
Q ss_pred CCCC-CcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeecC
Q 025144 136 PFSD-CFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNK 181 (257)
Q Consensus 136 ~~~~-~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 181 (257)
++++ .+||+|++..+++++.+ .+.+.|+|||.+++.....
T Consensus 152 ~~~~~~~fD~Ii~~~~~~~~~~------~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 152 GFPPKAPYDVIIVTAGAPKIPE------PLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp CCGGGCCEEEEEECSBBSSCCH------HHHHTEEEEEEEEEEECSS
T ss_pred CCCCCCCccEEEECCcHHHHHH------HHHHhcCCCcEEEEEEecC
Confidence 3333 35999999999888763 6888999999998876543
No 193
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.59 E-value=3.5e-15 Score=116.99 Aligned_cols=110 Identities=15% Similarity=0.182 Sum_probs=89.2
Q ss_pred CCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC-C-C-----C
Q 025144 66 GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-P-F-----S 138 (257)
Q Consensus 66 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-~-~-----~ 138 (257)
...++.+|||||||+|..+..+++.++++.+++++|+++.+++.++++++..+.. .++.++.+|..+. + + +
T Consensus 76 ~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~--~~i~~~~gda~~~l~~l~~~~~~ 153 (247)
T 1sui_A 76 KLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVD--HKIDFREGPALPVLDEMIKDEKN 153 (247)
T ss_dssp HHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCG--GGEEEEESCHHHHHHHHHHSGGG
T ss_pred HhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC--CCeEEEECCHHHHHHHHHhccCC
Confidence 3445679999999999999999998754789999999999999999998765432 5799999998753 2 1 1
Q ss_pred CCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeec
Q 025144 139 DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 139 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
+++||+|++... ..+....++.+.++|||||.+++.+..
T Consensus 154 ~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~ 192 (247)
T 1sui_A 154 HGSYDFIFVDAD---KDNYLNYHKRLIDLVKVGGVIGYDNTL 192 (247)
T ss_dssp TTCBSEEEECSC---STTHHHHHHHHHHHBCTTCCEEEECTT
T ss_pred CCCEEEEEEcCc---hHHHHHHHHHHHHhCCCCeEEEEecCC
Confidence 478999998754 346788999999999999999876543
No 194
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.59 E-value=3.2e-15 Score=127.57 Aligned_cols=117 Identities=19% Similarity=0.178 Sum_probs=93.1
Q ss_pred HHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCC
Q 025144 54 HRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDAL 133 (257)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~ 133 (257)
.+.+.+.+...+...++.+|||||||+|.++..+++. +..+|+++|+|+ +++.|+++++..+.. .++.++.+|+.
T Consensus 143 t~~~~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~--~~~~V~gvD~s~-~l~~A~~~~~~~gl~--~~v~~~~~d~~ 217 (480)
T 3b3j_A 143 TGTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNLT--DRIVVIPGKVE 217 (480)
T ss_dssp HHHHHHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHT--TCSEEEEEECHH-HHHHHHHHHHHTTCT--TTEEEEESCTT
T ss_pred HHHHHHHHHHhhhhcCCCEEEEecCcccHHHHHHHHc--CCCEEEEEEcHH-HHHHHHHHHHHcCCC--CcEEEEECchh
Confidence 3444555555555567789999999999999988875 456999999998 999999887655432 58999999999
Q ss_pred CCCCCCCcccEEEecccccCcc--cHHHHHHHHHhcccCCCEEEE
Q 025144 134 DLPFSDCFFDAITMGYGLRNVV--DKRKALEESFRVLKPGSRISV 176 (257)
Q Consensus 134 ~~~~~~~~~D~v~~~~~l~~~~--~~~~~l~~~~~~Lk~gG~l~~ 176 (257)
+++++ ++||+|++..+++++. +....+.++++.|||||.+++
T Consensus 218 ~~~~~-~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 218 EVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp TCCCS-SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred hCccC-CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 87654 6899999987766653 456678889999999999974
No 195
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.58 E-value=4.4e-15 Score=115.65 Aligned_cols=100 Identities=17% Similarity=0.268 Sum_probs=81.4
Q ss_pred CCCeEEEecCCCChhHHHHHHH---hCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC---CC-CCCc
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQ---VGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL---PF-SDCF 141 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~---~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~---~~-~~~~ 141 (257)
++.+|||||||+|..+..+++. +.++.+|+++|+|+.+++.|+.. ..++.++++|..+. +. .+.+
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~--------~~~v~~~~gD~~~~~~l~~~~~~~ 152 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASD--------MENITLHQGDCSDLTTFEHLREMA 152 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGG--------CTTEEEEECCSSCSGGGGGGSSSC
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhcc--------CCceEEEECcchhHHHHHhhccCC
Confidence 4579999999999999999887 35678999999999998877621 15899999999884 43 2347
Q ss_pred ccEEEecccccCcccHHHHHHHHHh-cccCCCEEEEEee
Q 025144 142 FDAITMGYGLRNVVDKRKALEESFR-VLKPGSRISVLDF 179 (257)
Q Consensus 142 ~D~v~~~~~l~~~~~~~~~l~~~~~-~Lk~gG~l~~~~~ 179 (257)
||+|++... | .+....+.++.+ +|||||.+++.+.
T Consensus 153 fD~I~~d~~-~--~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 153 HPLIFIDNA-H--ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp SSEEEEESS-C--SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred CCEEEECCc-h--HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 999998665 3 367889999997 9999999988664
No 196
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.58 E-value=1.6e-15 Score=112.13 Aligned_cols=106 Identities=11% Similarity=0.072 Sum_probs=84.1
Q ss_pred CCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC-C-C--CCCcccE
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-P-F--SDCFFDA 144 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-~-~--~~~~~D~ 144 (257)
++.+|||+|||+|..+..+++. +.+++++|+|+.+++.++++....+ .++.++++|+.+. + . .+++||+
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~~D~ 113 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASE---GWEAVLVEKDPEAVRLLKENVRRTG----LGARVVALPVEVFLPEAKAQGERFTV 113 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHT---TCEEEEECCCHHHHHHHHHHHHHHT----CCCEEECSCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHC---CCeEEEEeCCHHHHHHHHHHHHHcC----CceEEEeccHHHHHHhhhccCCceEE
Confidence 6779999999999999999887 2359999999999999999886543 2789999998763 2 1 1247999
Q ss_pred EEecccccCcccHHHHHHHHH--hcccCCCEEEEEeecCCC
Q 025144 145 ITMGYGLRNVVDKRKALEESF--RVLKPGSRISVLDFNKST 183 (257)
Q Consensus 145 v~~~~~l~~~~~~~~~l~~~~--~~Lk~gG~l~~~~~~~~~ 183 (257)
|++..+++ .+....++.+. ++|+|||.+++.......
T Consensus 114 i~~~~~~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~~ 152 (171)
T 1ws6_A 114 AFMAPPYA--MDLAALFGELLASGLVEAGGLYVLQHPKDLY 152 (171)
T ss_dssp EEECCCTT--SCTTHHHHHHHHHTCEEEEEEEEEEEETTSC
T ss_pred EEECCCCc--hhHHHHHHHHHhhcccCCCcEEEEEeCCccC
Confidence 99988765 45566677777 999999999887665433
No 197
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.58 E-value=1.8e-14 Score=113.04 Aligned_cols=110 Identities=20% Similarity=0.339 Sum_probs=85.2
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhc-----cCCCeeEEEccCCC-CC--CCC
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKA-----CYKNIEWVEGDALD-LP--FSD 139 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~-----~~~~~~~~~~d~~~-~~--~~~ 139 (257)
.++.+|||||||+|.++..+++.. +..+++++|+|+.+++.++++++..... ...++.++++|+.+ ++ ++.
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~ 126 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAF-PEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEK 126 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHS-TTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhC-CCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccc
Confidence 466799999999999999999884 6679999999999999999887543100 12589999999987 44 667
Q ss_pred CcccEEEecccccCccc--------HHHHHHHHHhcccCCCEEEEEe
Q 025144 140 CFFDAITMGYGLRNVVD--------KRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 140 ~~~D~v~~~~~l~~~~~--------~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
+++|.|++...-.+... ...++..+.++|+|||.+++..
T Consensus 127 ~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 127 GQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp TCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 88999986543222111 1589999999999999998853
No 198
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.58 E-value=1.7e-14 Score=111.80 Aligned_cols=114 Identities=20% Similarity=0.305 Sum_probs=89.3
Q ss_pred HHHHhhh--CCCCCCeEEEecCCCChhHHHHHHHhCC-----CceEEEEeCChhHHHHHHhhhhhhhh--ccCCCeeEEE
Q 025144 59 RMAVSWS--GAKTGDNVLDVCCGSGDLSFLLSEQVGS-----QGKVIGLDFSKNQLSMASSRQDLVSK--ACYKNIEWVE 129 (257)
Q Consensus 59 ~~~~~~~--~~~~~~~vLdiG~G~G~~~~~l~~~~~~-----~~~v~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~~~~ 129 (257)
..+...+ ...++.+|||+|||+|..+..+++..+. ..+|+++|+++.+++.+++++...+. ....++.+..
T Consensus 72 ~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 151 (227)
T 1r18_A 72 AFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVE 151 (227)
T ss_dssp HHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred HHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEE
Confidence 3444444 4677889999999999999999987532 25899999999999999998765431 0015899999
Q ss_pred ccCCCCCCCC-CcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 130 GDALDLPFSD-CFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 130 ~d~~~~~~~~-~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
+|..+ .+++ ++||+|++...++++. +++.+.|||||.+++...
T Consensus 152 ~d~~~-~~~~~~~fD~I~~~~~~~~~~------~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 152 GDGRK-GYPPNAPYNAIHVGAAAPDTP------TELINQLASGGRLIVPVG 195 (227)
T ss_dssp SCGGG-CCGGGCSEEEEEECSCBSSCC------HHHHHTEEEEEEEEEEES
T ss_pred CCccc-CCCcCCCccEEEECCchHHHH------HHHHHHhcCCCEEEEEEe
Confidence 99987 3333 7899999999988765 678999999999987654
No 199
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.57 E-value=1.8e-14 Score=114.66 Aligned_cols=118 Identities=15% Similarity=0.263 Sum_probs=93.7
Q ss_pred HHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCC---
Q 025144 61 AVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF--- 137 (257)
Q Consensus 61 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~--- 137 (257)
+...+...++.+|||+|||+|..+..+++.++...+|+++|+++.+++.++++++..+. .++.++++|..+++.
T Consensus 75 ~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~---~~v~~~~~D~~~~~~~~~ 151 (274)
T 3ajd_A 75 PPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGV---LNTIIINADMRKYKDYLL 151 (274)
T ss_dssp HHHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTC---CSEEEEESCHHHHHHHHH
T ss_pred HHHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCC---CcEEEEeCChHhcchhhh
Confidence 34456677889999999999999999998764447999999999999999999876543 489999999887543
Q ss_pred -CCCcccEEEecccccC------------------cccHHHHHHHHHhcccCCCEEEEEeecC
Q 025144 138 -SDCFFDAITMGYGLRN------------------VVDKRKALEESFRVLKPGSRISVLDFNK 181 (257)
Q Consensus 138 -~~~~~D~v~~~~~l~~------------------~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 181 (257)
..++||+|++...... ......+++++.+.|||||.+++.+.+.
T Consensus 152 ~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 152 KNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp HTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred hccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 2578999998633221 1345788999999999999998887654
No 200
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.56 E-value=7.1e-14 Score=109.60 Aligned_cols=111 Identities=22% Similarity=0.223 Sum_probs=91.8
Q ss_pred HHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCC
Q 025144 59 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFS 138 (257)
Q Consensus 59 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 138 (257)
..+...+...++.+|||+|||+|..+..+++. ..+++++|+++.+++.++++....+.. .++.+...|+.+...+
T Consensus 81 ~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~--~~~~~~~~d~~~~~~~ 155 (248)
T 2yvl_A 81 FYIALKLNLNKEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLG--KNVKFFNVDFKDAEVP 155 (248)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCC--TTEEEECSCTTTSCCC
T ss_pred HHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCC--CcEEEEEcChhhcccC
Confidence 35556667788899999999999999999987 569999999999999999987654322 5789999999885435
Q ss_pred CCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 139 DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 139 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
+++||+|++. .+++...++++.++|+|||.+++...
T Consensus 156 ~~~~D~v~~~-----~~~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 156 EGIFHAAFVD-----VREPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp TTCBSEEEEC-----SSCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred CCcccEEEEC-----CcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 6789999973 44677889999999999999988764
No 201
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.56 E-value=5.7e-14 Score=114.04 Aligned_cols=110 Identities=17% Similarity=0.086 Sum_probs=83.9
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhc-cCCCeeEEEccCCCC-CCCCCcccEE
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKA-CYKNIEWVEGDALDL-PFSDCFFDAI 145 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~-~~~~~~~~~~d~~~~-~~~~~~~D~v 145 (257)
..+.+|||||||+|..+..+++.. +..+++++|+|+.+++.+++++...... ..++++++.+|..+. +..+++||+|
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvI 193 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVI 193 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEE
Confidence 445799999999999999998763 5679999999999999999987642100 026899999998663 2235789999
Q ss_pred EecccccCc--ccH--HHHHHHHHhcccCCCEEEEEe
Q 025144 146 TMGYGLRNV--VDK--RKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 146 ~~~~~l~~~--~~~--~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
++......- ... ..+++.+++.|+|||.+++..
T Consensus 194 i~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 194 IVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp EEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 986532211 111 788999999999999998764
No 202
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.56 E-value=5e-14 Score=112.06 Aligned_cols=110 Identities=13% Similarity=0.042 Sum_probs=84.4
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhc-cCCCeeEEEccCCCC-CCCCCcccEE
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKA-CYKNIEWVEGDALDL-PFSDCFFDAI 145 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~-~~~~~~~~~~d~~~~-~~~~~~~D~v 145 (257)
+.+.+|||||||+|..+..+++.. +..+++++|+++.+++.|++++...... ..++++++.+|..+. +..+++||+|
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~I 152 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHP-SVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVI 152 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCT-TCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCC-CCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEE
Confidence 346799999999999999998763 4579999999999999999987542111 126899999998763 2335789999
Q ss_pred EecccccCccc----HHHHHHHHHhcccCCCEEEEEe
Q 025144 146 TMGYGLRNVVD----KRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 146 ~~~~~l~~~~~----~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
++....+..+. ...+++.++++|+|||.+++..
T Consensus 153 i~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 153 MVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp EESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred EECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 99654432211 2678999999999999997764
No 203
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.56 E-value=2.4e-14 Score=108.68 Aligned_cols=101 Identities=18% Similarity=0.213 Sum_probs=79.6
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCC-CceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC---------
Q 025144 67 AKTGDNVLDVCCGSGDLSFLLSEQVGS-QGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP--------- 136 (257)
Q Consensus 67 ~~~~~~vLdiG~G~G~~~~~l~~~~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~--------- 136 (257)
..++.+|||+|||+|.++..+++.+++ ..+|+++|+|+.. . .+++.++++|+.+.+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~------~--------~~~v~~~~~d~~~~~~~~~~~~~~ 85 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD------P--------IPNVYFIQGEIGKDNMNNIKNINY 85 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC------C--------CTTCEEEECCTTTTSSCCC-----
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC------C--------CCCceEEEccccchhhhhhccccc
Confidence 467789999999999999999998632 5799999999831 1 157899999998765
Q ss_pred ----------------CCCCcccEEEecccccCc----ccH-------HHHHHHHHhcccCCCEEEEEeecC
Q 025144 137 ----------------FSDCFFDAITMGYGLRNV----VDK-------RKALEESFRVLKPGSRISVLDFNK 181 (257)
Q Consensus 137 ----------------~~~~~~D~v~~~~~l~~~----~~~-------~~~l~~~~~~Lk~gG~l~~~~~~~ 181 (257)
+++++||+|++...+++. .+. ..+++.+.++|||||.+++..+..
T Consensus 86 i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 157 (201)
T 2plw_A 86 IDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLG 157 (201)
T ss_dssp ------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred cccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCC
Confidence 456789999998877763 222 237889999999999998866543
No 204
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.56 E-value=2.4e-13 Score=103.65 Aligned_cols=94 Identities=20% Similarity=0.253 Sum_probs=77.3
Q ss_pred CCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEE
Q 025144 66 GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAI 145 (257)
Q Consensus 66 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v 145 (257)
...++.+|||+|||+|.++..+++. + ..+++++|+|+.+++.++++.+..+ .++.++++|+.+++ ++||+|
T Consensus 46 ~~~~~~~vlD~g~G~G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~---~~~D~v 116 (207)
T 1wy7_A 46 GDIEGKVVADLGAGTGVLSYGALLL-G-AKEVICVEVDKEAVDVLIENLGEFK----GKFKVFIGDVSEFN---SRVDIV 116 (207)
T ss_dssp TSSTTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHTGGGT----TSEEEEESCGGGCC---CCCSEE
T ss_pred CCCCcCEEEEeeCCCCHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHHHHHcC----CCEEEEECchHHcC---CCCCEE
Confidence 3556789999999999999999876 2 3489999999999999999886543 27999999998863 589999
Q ss_pred EecccccCcc--cHHHHHHHHHhcc
Q 025144 146 TMGYGLRNVV--DKRKALEESFRVL 168 (257)
Q Consensus 146 ~~~~~l~~~~--~~~~~l~~~~~~L 168 (257)
+++..++... ....+++.+.+++
T Consensus 117 ~~~~p~~~~~~~~~~~~l~~~~~~l 141 (207)
T 1wy7_A 117 IMNPPFGSQRKHADRPFLLKAFEIS 141 (207)
T ss_dssp EECCCCSSSSTTTTHHHHHHHHHHC
T ss_pred EEcCCCccccCCchHHHHHHHHHhc
Confidence 9998887764 3457788888887
No 205
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.56 E-value=3.7e-14 Score=115.62 Aligned_cols=120 Identities=19% Similarity=0.128 Sum_probs=89.0
Q ss_pred HHHHHHhhhC-CCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC
Q 025144 57 WKRMAVSWSG-AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL 135 (257)
Q Consensus 57 ~~~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 135 (257)
.+..+...+. ..++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.++++++..+.. ..++.++++|+.++
T Consensus 140 ~~~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~---ga~V~~VD~s~~al~~a~~n~~~~gl~-~~~v~~i~~D~~~~ 215 (332)
T 2igt_A 140 HWEWLKNAVETADRPLKVLNLFGYTGVASLVAAAA---GAEVTHVDASKKAIGWAKENQVLAGLE-QAPIRWICEDAMKF 215 (332)
T ss_dssp HHHHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHT---TCEEEEECSCHHHHHHHHHHHHHHTCT-TSCEEEECSCHHHH
T ss_pred HHHHHHHHHHhcCCCCcEEEcccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCC-ccceEEEECcHHHH
Confidence 3333444432 345679999999999999999876 359999999999999999998655421 01489999998774
Q ss_pred CC----CCCcccEEEecccc----------cCcccHHHHHHHHHhcccCCCEEEEEeec
Q 025144 136 PF----SDCFFDAITMGYGL----------RNVVDKRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 136 ~~----~~~~~D~v~~~~~l----------~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
.. ..++||+|++.... +...+...+++.+.++|+|||.+++....
T Consensus 216 l~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 216 IQREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp HHHHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred HHHHHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 31 14689999995442 12345678999999999999998776544
No 206
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.55 E-value=6.1e-14 Score=112.75 Aligned_cols=110 Identities=15% Similarity=0.025 Sum_probs=82.2
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhc-cCCCeeEEEccCCCC-CCCCCcccEE
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKA-CYKNIEWVEGDALDL-PFSDCFFDAI 145 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~-~~~~~~~~~~d~~~~-~~~~~~~D~v 145 (257)
..+.+|||||||+|..+..+++.. +..+++++|+|+.+++.+++++...... ..++++++.+|+.+. +..+++||+|
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 167 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHD-SVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVI 167 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTST-TCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEE
Confidence 345799999999999999998763 4579999999999999999987542111 126899999998653 3335789999
Q ss_pred EecccccCcc-----cHHHHHHHHHhcccCCCEEEEEe
Q 025144 146 TMGYGLRNVV-----DKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 146 ~~~~~l~~~~-----~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
++.....+.. ....+++.++++|+|||.+++..
T Consensus 168 i~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 168 IIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp EEEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 9854322121 12688999999999999998764
No 207
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.55 E-value=1.7e-13 Score=113.87 Aligned_cols=105 Identities=14% Similarity=0.080 Sum_probs=85.5
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCC-CCC-CCCcccEE
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD-LPF-SDCFFDAI 145 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~-~~~-~~~~~D~v 145 (257)
.++.+|||+| |+|.++..++.. ++..+++++|+|+.+++.|+++++..+. .++.++++|+.+ ++. .+++||+|
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~-~~~~~v~~vDi~~~~l~~a~~~~~~~g~---~~v~~~~~D~~~~l~~~~~~~fD~V 245 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLS-GLPKRIAVLDIDERLTKFIEKAANEIGY---EDIEIFTFDLRKPLPDYALHKFDTF 245 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHH-TCCSEEEEECSCHHHHHHHHHHHHHHTC---CCEEEECCCTTSCCCTTTSSCBSEE
T ss_pred CCCCEEEEEC-CCCHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCC---CCEEEEEChhhhhchhhccCCccEE
Confidence 4578999999 999999999877 4557999999999999999999876542 379999999988 553 34689999
Q ss_pred EecccccCcccHHHHHHHHHhcccCCCEEEEEe
Q 025144 146 TMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 146 ~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
+++..++... ...+++++.++|||||.+++..
T Consensus 246 i~~~p~~~~~-~~~~l~~~~~~LkpgG~~~~~~ 277 (373)
T 2qm3_A 246 ITDPPETLEA-IRAFVGRGIATLKGPRCAGYFG 277 (373)
T ss_dssp EECCCSSHHH-HHHHHHHHHHTBCSTTCEEEEE
T ss_pred EECCCCchHH-HHHHHHHHHHHcccCCeEEEEE
Confidence 9987665443 5788999999999999553433
No 208
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.55 E-value=9.6e-14 Score=117.98 Aligned_cols=123 Identities=20% Similarity=0.262 Sum_probs=97.4
Q ss_pred HHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC
Q 025144 57 WKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP 136 (257)
Q Consensus 57 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~ 136 (257)
-...+...+...++.+|||+|||+|..+..+++.++...+++++|+++.+++.++++++..+. .++.++++|..+.+
T Consensus 247 ~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~---~~v~~~~~D~~~~~ 323 (450)
T 2yxl_A 247 ASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI---KIVKPLVKDARKAP 323 (450)
T ss_dssp HHHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC---CSEEEECSCTTCCS
T ss_pred hhHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC---CcEEEEEcChhhcc
Confidence 334455566788889999999999999999999864447999999999999999999876543 47999999998865
Q ss_pred --CCCCcccEEEec------ccccCcccH----------------HHHHHHHHhcccCCCEEEEEeecCC
Q 025144 137 --FSDCFFDAITMG------YGLRNVVDK----------------RKALEESFRVLKPGSRISVLDFNKS 182 (257)
Q Consensus 137 --~~~~~~D~v~~~------~~l~~~~~~----------------~~~l~~~~~~Lk~gG~l~~~~~~~~ 182 (257)
+++++||+|++. .+++..++. ..++.++.+.|||||.+++.+.+..
T Consensus 324 ~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~ 393 (450)
T 2yxl_A 324 EIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIF 393 (450)
T ss_dssp SSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred hhhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCC
Confidence 444789999973 233333332 5789999999999999998876653
No 209
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.55 E-value=9.6e-15 Score=113.51 Aligned_cols=110 Identities=18% Similarity=0.179 Sum_probs=88.1
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC----CCCC--C
Q 025144 67 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL----PFSD--C 140 (257)
Q Consensus 67 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~----~~~~--~ 140 (257)
..++.+|||+|||+|..+..+++.++++.+++++|+++.+++.|+++++..+.. .++.++.+|..+. +..+ +
T Consensus 70 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~--~~i~~~~~d~~~~l~~l~~~~~~~ 147 (232)
T 3cbg_A 70 LTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVA--EKISLRLGPALATLEQLTQGKPLP 147 (232)
T ss_dssp HHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCG--GGEEEEESCHHHHHHHHHTSSSCC
T ss_pred hcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC--CcEEEEEcCHHHHHHHHHhcCCCC
Confidence 345679999999999999999988644679999999999999999988655432 4799999997542 2222 7
Q ss_pred cccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeecC
Q 025144 141 FFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNK 181 (257)
Q Consensus 141 ~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 181 (257)
+||+|++... .++....++.+.++|+|||.+++.+...
T Consensus 148 ~fD~V~~d~~---~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 185 (232)
T 3cbg_A 148 EFDLIFIDAD---KRNYPRYYEIGLNLLRRGGLMVIDNVLW 185 (232)
T ss_dssp CEEEEEECSC---GGGHHHHHHHHHHTEEEEEEEEEECTTG
T ss_pred CcCEEEECCC---HHHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 8999998754 3467889999999999999998876443
No 210
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.55 E-value=7.9e-14 Score=111.40 Aligned_cols=111 Identities=17% Similarity=0.090 Sum_probs=85.5
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhc-cCCCeeEEEccCCCC-CCCCCcccE
Q 025144 67 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKA-CYKNIEWVEGDALDL-PFSDCFFDA 144 (257)
Q Consensus 67 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~-~~~~~~~~~~d~~~~-~~~~~~~D~ 144 (257)
.+++.+|||||||+|..+..+++. .+..+++++|+++.+++.+++++...... ..++++++.+|..+. +..+++||+
T Consensus 76 ~~~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~ 154 (283)
T 2i7c_A 76 SKEPKNVLVVGGGDGGIIRELCKY-KSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDV 154 (283)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTC-TTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEE
T ss_pred CCCCCeEEEEeCCcCHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceE
Confidence 345679999999999999999876 35679999999999999999987543111 126899999998763 222578999
Q ss_pred EEecccccCcc--cH--HHHHHHHHhcccCCCEEEEEe
Q 025144 145 ITMGYGLRNVV--DK--RKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 145 v~~~~~l~~~~--~~--~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
|++....+..+ .. ..+++.++++|+|||.+++..
T Consensus 155 Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 155 IIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp EEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 99865433222 22 689999999999999998764
No 211
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.55 E-value=5.9e-15 Score=115.24 Aligned_cols=116 Identities=15% Similarity=0.143 Sum_probs=90.6
Q ss_pred HHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC-C--
Q 025144 60 MAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-P-- 136 (257)
Q Consensus 60 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-~-- 136 (257)
.+...+...++.+|||+|||+|..+..+++.+++..+++++|+++.+++.+++++...+.. .++.++.+|..+. +
T Consensus 51 ~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~--~~v~~~~~d~~~~~~~~ 128 (239)
T 2hnk_A 51 FLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLE--NKIFLKLGSALETLQVL 128 (239)
T ss_dssp HHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCG--GGEEEEESCHHHHHHHH
T ss_pred HHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC--CCEEEEECCHHHHHHHH
Confidence 3334444456789999999999999999998644679999999999999999988654432 3589999987652 1
Q ss_pred ------------CCC--CcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeec
Q 025144 137 ------------FSD--CFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 137 ------------~~~--~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
+++ ++||+|++... .++....++.+.++|+|||.+++.+..
T Consensus 129 ~~~~~~~~~~~~f~~~~~~fD~I~~~~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~ 183 (239)
T 2hnk_A 129 IDSKSAPSWASDFAFGPSSIDLFFLDAD---KENYPNYYPLILKLLKPGGLLIADNVL 183 (239)
T ss_dssp HHCSSCCGGGTTTCCSTTCEEEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred HhhcccccccccccCCCCCcCEEEEeCC---HHHHHHHHHHHHHHcCCCeEEEEEccc
Confidence 222 78999998754 345678899999999999999887644
No 212
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.54 E-value=6e-14 Score=112.60 Aligned_cols=108 Identities=12% Similarity=0.091 Sum_probs=85.9
Q ss_pred CCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC--CCCCCcccEEEe
Q 025144 70 GDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL--PFSDCFFDAITM 147 (257)
Q Consensus 70 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~D~v~~ 147 (257)
..+|||||||+|..+..+++.+ ++.+++++|+++.+++.+++++.... .++++++.+|..++ ..++++||+|++
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~-p~~~v~~VEidp~vi~~Ar~~~~~~~---~~rv~v~~~Da~~~l~~~~~~~fDvIi~ 165 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVY-PQSRNTVVELDAELARLSREWFDIPR---APRVKIRVDDARMVAESFTPASRDVIIR 165 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHS-TTCEEEEEESCHHHHHHHHHHSCCCC---TTTEEEEESCHHHHHHTCCTTCEEEEEE
T ss_pred CCEEEEEECCcCHHHHHHHHHC-CCcEEEEEECCHHHHHHHHHhccccC---CCceEEEECcHHHHHhhccCCCCCEEEE
Confidence 3499999999999999999974 67799999999999999999875321 26899999998764 244678999998
Q ss_pred cccccCc-c-c--HHHHHHHHHhcccCCCEEEEEeecC
Q 025144 148 GYGLRNV-V-D--KRKALEESFRVLKPGSRISVLDFNK 181 (257)
Q Consensus 148 ~~~l~~~-~-~--~~~~l~~~~~~Lk~gG~l~~~~~~~ 181 (257)
....+.. + . ...+++.++++|+|||++++.....
T Consensus 166 D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~~ 203 (317)
T 3gjy_A 166 DVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCGDH 203 (317)
T ss_dssp CCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEEC
T ss_pred CCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 6543322 1 1 2689999999999999998776543
No 213
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.54 E-value=1.8e-14 Score=112.32 Aligned_cols=109 Identities=16% Similarity=0.194 Sum_probs=88.5
Q ss_pred CCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC-C-C-----C
Q 025144 66 GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-P-F-----S 138 (257)
Q Consensus 66 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-~-~-----~ 138 (257)
...++.+|||||||+|..+..+++.++++.+++++|+++.+++.++++++..+.. .++.++.+|..+. + + +
T Consensus 67 ~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~--~~i~~~~gda~~~l~~l~~~~~~ 144 (237)
T 3c3y_A 67 KLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVE--HKINFIESDAMLALDNLLQGQES 144 (237)
T ss_dssp HHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCG--GGEEEEESCHHHHHHHHHHSTTC
T ss_pred HhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC--CcEEEEEcCHHHHHHHHHhccCC
Confidence 3446679999999999999999998755789999999999999999998765432 4799999998753 1 1 2
Q ss_pred CCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 139 DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 139 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
+++||+|++... ..+....++.+.++|+|||.+++.+.
T Consensus 145 ~~~fD~I~~d~~---~~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 145 EGSYDFGFVDAD---KPNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp TTCEEEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred CCCcCEEEECCc---hHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 578999998643 34568899999999999999987654
No 214
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.54 E-value=7.5e-14 Score=113.72 Aligned_cols=110 Identities=15% Similarity=0.172 Sum_probs=84.8
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhc-cCCCeeEEEccCCCC--CCCCCccc
Q 025144 67 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKA-CYKNIEWVEGDALDL--PFSDCFFD 143 (257)
Q Consensus 67 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~-~~~~~~~~~~d~~~~--~~~~~~~D 143 (257)
...+.+|||||||+|..+..+++. .+..+|+++|+|+.+++.|++++...... ..++++++.+|+.+. ..++++||
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~-~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fD 196 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARH-ASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYD 196 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTC-TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEE
T ss_pred CCCCCEEEEECCCccHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCcc
Confidence 345679999999999999999876 35679999999999999999987542111 125899999998763 23457899
Q ss_pred EEEecccccC--ccc--HHHHHHHHHhcccCCCEEEEE
Q 025144 144 AITMGYGLRN--VVD--KRKALEESFRVLKPGSRISVL 177 (257)
Q Consensus 144 ~v~~~~~l~~--~~~--~~~~l~~~~~~Lk~gG~l~~~ 177 (257)
+|++...... ..+ ...+++.++++|+|||.+++.
T Consensus 197 lIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 197 AVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 9998654221 122 378999999999999999875
No 215
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.54 E-value=4.6e-14 Score=112.18 Aligned_cols=108 Identities=19% Similarity=0.214 Sum_probs=90.0
Q ss_pred hCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccE
Q 025144 65 SGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDA 144 (257)
Q Consensus 65 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 144 (257)
....++.+|||+|||+|.++..+++.. +..+|+++|+|+.+++.++++++..+. .++.++++|+.+.+. .++||+
T Consensus 115 ~~~~~~~~VLDlgcG~G~~s~~la~~~-~~~~V~~vD~s~~av~~a~~n~~~n~l---~~~~~~~~d~~~~~~-~~~~D~ 189 (272)
T 3a27_A 115 FISNENEVVVDMFAGIGYFTIPLAKYS-KPKLVYAIEKNPTAYHYLCENIKLNKL---NNVIPILADNRDVEL-KDVADR 189 (272)
T ss_dssp TSCCTTCEEEETTCTTTTTHHHHHHHT-CCSEEEEEECCHHHHHHHHHHHHHTTC---SSEEEEESCGGGCCC-TTCEEE
T ss_pred HhcCCCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCC---CCEEEEECChHHcCc-cCCceE
Confidence 345678899999999999999999884 456999999999999999998865443 478899999988733 578999
Q ss_pred EEecccccCcccHHHHHHHHHhcccCCCEEEEEeecC
Q 025144 145 ITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNK 181 (257)
Q Consensus 145 v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 181 (257)
|++.... +...++..+.+.|+|||.+++.+...
T Consensus 190 Vi~d~p~----~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 190 VIMGYVH----KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp EEECCCS----SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred EEECCcc----cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 9987654 56678899999999999999877654
No 216
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.53 E-value=1.3e-13 Score=106.24 Aligned_cols=104 Identities=12% Similarity=0.074 Sum_probs=87.1
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEe
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 147 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 147 (257)
.+..+|||||||+|-++..+... .+..+|+++|+++.+++.+++++...+ .+..+...|....+ +.++||++++
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~-~p~a~y~a~DId~~~le~a~~~l~~~g----~~~~~~v~D~~~~~-p~~~~DvaL~ 204 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGL-PAETVYIASDIDARLVGFVDEALTRLN----VPHRTNVADLLEDR-LDEPADVTLL 204 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTC-CTTCEEEEEESBHHHHHHHHHHHHHTT----CCEEEEECCTTTSC-CCSCCSEEEE
T ss_pred CCCceeeeeccCccHHHHHHHhh-CCCCEEEEEeCCHHHHHHHHHHHHhcC----CCceEEEeeecccC-CCCCcchHHH
Confidence 44669999999999999998876 378899999999999999999987665 46888999988755 4578999999
Q ss_pred cccccCcccH--HHHHHHHHhcccCCCEEEEEe
Q 025144 148 GYGLRNVVDK--RKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 148 ~~~l~~~~~~--~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
+-+++++++. ...+ ++...|+++|.++-.+
T Consensus 205 lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp 236 (281)
T 3lcv_B 205 LKTLPCLETQQRGSGW-EVIDIVNSPNIVVTFP 236 (281)
T ss_dssp TTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEEE
T ss_pred HHHHHHhhhhhhHHHH-HHHHHhCCCCEEEecc
Confidence 9999999753 3445 8999999999986554
No 217
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.53 E-value=7.7e-14 Score=113.09 Aligned_cols=110 Identities=14% Similarity=0.030 Sum_probs=86.0
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhh--ccCCCeeEEEccCCCC-CCCCCcccE
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSK--ACYKNIEWVEGDALDL-PFSDCFFDA 144 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~~~~~d~~~~-~~~~~~~D~ 144 (257)
+.+.+|||||||+|..+..+++.. +..+++++|+++.+++.+++++..... -..++++++.+|+.+. +..+++||+
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~ 154 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHP-TVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDV 154 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTST-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccE
Confidence 445799999999999999998863 567999999999999999998754211 0126899999998763 333578999
Q ss_pred EEecccccC---cc--c--HHHHHHHHHhcccCCCEEEEEe
Q 025144 145 ITMGYGLRN---VV--D--KRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 145 v~~~~~l~~---~~--~--~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
|++....+. -+ . ...+++.++++|+|||.+++..
T Consensus 155 Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 155 VIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 999766544 11 1 3788999999999999998764
No 218
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.53 E-value=6.7e-14 Score=113.12 Aligned_cols=110 Identities=16% Similarity=0.071 Sum_probs=81.3
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhc-cCCCeeEEEccCCCC-CCCCCcccEE
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKA-CYKNIEWVEGDALDL-PFSDCFFDAI 145 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~-~~~~~~~~~~d~~~~-~~~~~~~D~v 145 (257)
..+.+|||||||+|..+..+++. .+..+++++|+++.+++.|++++...... ..++++++.+|+.+. +..+++||+|
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 185 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKH-ESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVI 185 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTC-TTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEE
Confidence 34579999999999999999876 35679999999999999999987543100 126899999998763 2245789999
Q ss_pred EecccccCccc--H--HHHHHHHHhcccCCCEEEEEe
Q 025144 146 TMGYGLRNVVD--K--RKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 146 ~~~~~l~~~~~--~--~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
++....+.-+. . ..+++.++++|+|||.+++..
T Consensus 186 i~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 186 ITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp EECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred EEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 98654221111 1 678999999999999998764
No 219
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.52 E-value=4.9e-14 Score=113.56 Aligned_cols=112 Identities=13% Similarity=0.064 Sum_probs=83.6
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhc-cCCCeeEEEccCCCC-CCCCCcccE
Q 025144 67 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKA-CYKNIEWVEGDALDL-PFSDCFFDA 144 (257)
Q Consensus 67 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~-~~~~~~~~~~d~~~~-~~~~~~~D~ 144 (257)
...+.+|||||||+|..+..+++. .+..+++++|+++.+++.|++++...... ..++++++.+|..+. +..+++||+
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~ 171 (304)
T 2o07_A 93 HPNPRKVLIIGGGDGGVLREVVKH-PSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDV 171 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTC-TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceE
Confidence 345679999999999999999876 35679999999999999999987542111 026899999998652 334578999
Q ss_pred EEecccccCcc----cHHHHHHHHHhcccCCCEEEEEee
Q 025144 145 ITMGYGLRNVV----DKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 145 v~~~~~l~~~~----~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
|++....+..+ ....++++++++|+|||.+++...
T Consensus 172 Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 210 (304)
T 2o07_A 172 IITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGE 210 (304)
T ss_dssp EEEECC-----------CHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecC
Confidence 99865433221 125689999999999999987653
No 220
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.52 E-value=1.5e-14 Score=112.22 Aligned_cols=112 Identities=15% Similarity=0.195 Sum_probs=88.8
Q ss_pred hhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC--CCCC--
Q 025144 64 WSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL--PFSD-- 139 (257)
Q Consensus 64 ~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~-- 139 (257)
+....++.+|||+|||+|..+..+++.+++..+++++|+++.+++.++++++..+.. .++.++.+|..+. .+..
T Consensus 64 l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~--~~i~~~~~d~~~~~~~~~~~~ 141 (229)
T 2avd_A 64 LARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAE--HKIDLRLKPALETLDELLAAG 141 (229)
T ss_dssp HHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCT--TTEEEEESCHHHHHHHHHHTT
T ss_pred HHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCC--CeEEEEEcCHHHHHHHHHhcC
Confidence 334456779999999999999999987644679999999999999999988655432 5799999998653 1111
Q ss_pred --CcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeec
Q 025144 140 --CFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 140 --~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
++||+|++... ..+....++.+.++|+|||.+++.+..
T Consensus 142 ~~~~~D~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~ 181 (229)
T 2avd_A 142 EAGTFDVAVVDAD---KENCSAYYERCLQLLRPGGILAVLRVL 181 (229)
T ss_dssp CTTCEEEEEECSC---STTHHHHHHHHHHHEEEEEEEEEECCS
T ss_pred CCCCccEEEECCC---HHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 68999998654 345678899999999999999886644
No 221
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.52 E-value=9.7e-15 Score=127.61 Aligned_cols=107 Identities=17% Similarity=0.278 Sum_probs=86.7
Q ss_pred CCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC--CCCCCcccEEE
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL--PFSDCFFDAIT 146 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~D~v~ 146 (257)
.+.+|||||||.|.++..+++. +++|+|+|.|+.+++.|+......+. .++.+.+++++++ ..++++||+|+
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~---ga~V~giD~~~~~i~~a~~~a~~~~~---~~~~~~~~~~~~~~~~~~~~~fD~v~ 139 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASK---GATIVGIDFQQENINVCRALAEENPD---FAAEFRVGRIEEVIAALEEGEFDLAI 139 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTSTT---SEEEEEECCHHHHHHHCCTTSCSEEE
T ss_pred CCCeEEEECCCCcHHHHHHHhC---CCEEEEECCCHHHHHHHHHHHHhcCC---CceEEEECCHHHHhhhccCCCccEEE
Confidence 4569999999999999999987 68999999999999999988765432 3789999999886 35578899999
Q ss_pred ecccccCcccHHHH--HHHHHhcccCCCEEEEEeecC
Q 025144 147 MGYGLRNVVDKRKA--LEESFRVLKPGSRISVLDFNK 181 (257)
Q Consensus 147 ~~~~l~~~~~~~~~--l~~~~~~Lk~gG~l~~~~~~~ 181 (257)
|..+++|++++..+ +..+.+.|+++|..++.....
T Consensus 140 ~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~ 176 (569)
T 4azs_A 140 GLSVFHHIVHLHGIDEVKRLLSRLADVTQAVILELAV 176 (569)
T ss_dssp EESCHHHHHHHHCHHHHHHHHHHHHHHSSEEEEECCC
T ss_pred ECcchhcCCCHHHHHHHHHHHHHhccccceeeEEecc
Confidence 99999999876433 456677788887766665443
No 222
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.52 E-value=3.9e-13 Score=101.95 Aligned_cols=90 Identities=19% Similarity=0.293 Sum_probs=72.6
Q ss_pred CCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEE
Q 025144 66 GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAI 145 (257)
Q Consensus 66 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v 145 (257)
...++.+|||+|||+|.++..+++. +..+++++|+|+.+++.++++. .++.++++|+.+++ ++||+|
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~--------~~~~~~~~d~~~~~---~~~D~v 114 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLL--GAESVTAFDIDPDAIETAKRNC--------GGVNFMVADVSEIS---GKYDTW 114 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHT--TBSEEEEEESCHHHHHHHHHHC--------TTSEEEECCGGGCC---CCEEEE
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHc--CCCEEEEEECCHHHHHHHHHhc--------CCCEEEECcHHHCC---CCeeEE
Confidence 4556789999999999999999876 3447999999999999999886 37899999998863 689999
Q ss_pred EecccccCccc--HHHHHHHHHhcc
Q 025144 146 TMGYGLRNVVD--KRKALEESFRVL 168 (257)
Q Consensus 146 ~~~~~l~~~~~--~~~~l~~~~~~L 168 (257)
+++..+++..+ ...+++++.+.+
T Consensus 115 ~~~~p~~~~~~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 115 IMNPPFGSVVKHSDRAFIDKAFETS 139 (200)
T ss_dssp EECCCC-------CHHHHHHHHHHE
T ss_pred EECCCchhccCchhHHHHHHHHHhc
Confidence 99999988854 356788888888
No 223
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.50 E-value=9.6e-14 Score=117.12 Aligned_cols=120 Identities=19% Similarity=0.257 Sum_probs=94.4
Q ss_pred HHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-C
Q 025144 59 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-F 137 (257)
Q Consensus 59 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-~ 137 (257)
..+...+...++.+|||+|||+|..+..+++.+++..+|+++|+++.+++.++++++..+. .++.+.+.|..++. .
T Consensus 95 ~l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~---~nv~v~~~Da~~l~~~ 171 (456)
T 3m4x_A 95 MIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGV---SNAIVTNHAPAELVPH 171 (456)
T ss_dssp HHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTC---SSEEEECCCHHHHHHH
T ss_pred HHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCC---CceEEEeCCHHHhhhh
Confidence 3444556778899999999999999999999876567999999999999999999877654 47999999987754 2
Q ss_pred CCCcccEEEecccc------cCccc----------------HHHHHHHHHhcccCCCEEEEEeecC
Q 025144 138 SDCFFDAITMGYGL------RNVVD----------------KRKALEESFRVLKPGSRISVLDFNK 181 (257)
Q Consensus 138 ~~~~~D~v~~~~~l------~~~~~----------------~~~~l~~~~~~Lk~gG~l~~~~~~~ 181 (257)
.+++||+|++.... ..-++ ...+|..+.++|||||.|+..+.+.
T Consensus 172 ~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 172 FSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp HTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred ccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeec
Confidence 35789999985432 11111 1267999999999999998877654
No 224
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.50 E-value=2.2e-13 Score=108.70 Aligned_cols=107 Identities=11% Similarity=0.067 Sum_probs=82.0
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhh--hh------ccCCCeeEEEccCCCC-CCC
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLV--SK------ACYKNIEWVEGDALDL-PFS 138 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~--~~------~~~~~~~~~~~d~~~~-~~~ 138 (257)
..+.+|||||||+|..+..+++. +..+++++|+++.+++.|++++ .. +. ...++++++.+|..+. +.
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~--~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~- 149 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH--DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN- 149 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS--CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-
Confidence 45679999999999999999876 4569999999999999999987 32 11 0126899999998653 22
Q ss_pred CCcccEEEecccccCcc--c--HHHHHHHHHhcccCCCEEEEEe
Q 025144 139 DCFFDAITMGYGLRNVV--D--KRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 139 ~~~~D~v~~~~~l~~~~--~--~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
+++||+|++....+.-+ . ...+++.++++|+|||.+++..
T Consensus 150 ~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 150 NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 57899999866532211 1 2678999999999999998764
No 225
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.50 E-value=2e-13 Score=116.26 Aligned_cols=121 Identities=19% Similarity=0.300 Sum_probs=94.2
Q ss_pred HHHHhhhCCC--CCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC
Q 025144 59 RMAVSWSGAK--TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP 136 (257)
Q Consensus 59 ~~~~~~~~~~--~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~ 136 (257)
......+... ++.+|||+|||+|..+..+++.+++...|+++|+|+.+++.++++++..+. .++.++++|..+++
T Consensus 105 ~l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~---~nv~~~~~D~~~~~ 181 (479)
T 2frx_A 105 MLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGI---SNVALTHFDGRVFG 181 (479)
T ss_dssp HHHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTC---CSEEEECCCSTTHH
T ss_pred HHHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---CcEEEEeCCHHHhh
Confidence 3334455556 888999999999999999999875567999999999999999999876553 47999999998764
Q ss_pred C-CCCcccEEEeccc------ccCccc----------------HHHHHHHHHhcccCCCEEEEEeecCC
Q 025144 137 F-SDCFFDAITMGYG------LRNVVD----------------KRKALEESFRVLKPGSRISVLDFNKS 182 (257)
Q Consensus 137 ~-~~~~~D~v~~~~~------l~~~~~----------------~~~~l~~~~~~Lk~gG~l~~~~~~~~ 182 (257)
. .+++||+|++... +...++ ...+|.++.++|||||.+++.+.+..
T Consensus 182 ~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~ 250 (479)
T 2frx_A 182 AAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLN 250 (479)
T ss_dssp HHSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCS
T ss_pred hhccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCC
Confidence 2 3578999998422 222121 24679999999999999998876543
No 226
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.50 E-value=2.9e-13 Score=106.70 Aligned_cols=100 Identities=15% Similarity=-0.078 Sum_probs=81.2
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhh-ccCCCeeEEEccCCCCCCCCCcccEEE
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSK-ACYKNIEWVEGDALDLPFSDCFFDAIT 146 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~D~v~ 146 (257)
+.+.+|||||||+|..+..+++. + .+++++|+++.+++.|++++..... -..++++++.+|..+.. ++||+|+
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~--~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii 144 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY--D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIF 144 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS--S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC--C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEE
Confidence 34579999999999999999877 4 7999999999999999988754210 01258999999998764 7899999
Q ss_pred ecccccCcccHHHHHHHHHhcccCCCEEEEEe
Q 025144 147 MGYGLRNVVDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 147 ~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
+.. .++..+++.++++|+|||.+++..
T Consensus 145 ~d~-----~dp~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 145 CLQ-----EPDIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp ESS-----CCCHHHHHHHHTTEEEEEEEEEEE
T ss_pred ECC-----CChHHHHHHHHHhcCCCcEEEEEc
Confidence 862 355679999999999999998754
No 227
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.49 E-value=3.9e-13 Score=113.64 Aligned_cols=123 Identities=18% Similarity=0.300 Sum_probs=97.0
Q ss_pred HHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCC
Q 025144 55 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD 134 (257)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 134 (257)
+.....+...+...++.+|||+|||+|..+..+++.. ++.+++++|+++.+++.++++++..+ .++.++++|..+
T Consensus 232 d~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~-~~~~v~a~D~~~~~l~~~~~~~~~~g----~~~~~~~~D~~~ 306 (429)
T 1sqg_A 232 DASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLG----MKATVKQGDGRY 306 (429)
T ss_dssp CHHHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHC-TTCEEEEEESSTTTHHHHHHHHHHTT----CCCEEEECCTTC
T ss_pred CHHHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHHHHcC----CCeEEEeCchhh
Confidence 3444555566777888999999999999999999985 45799999999999999999987654 357899999988
Q ss_pred CC--CCCCcccEEEecc------cccCcccH----------------HHHHHHHHhcccCCCEEEEEeecCC
Q 025144 135 LP--FSDCFFDAITMGY------GLRNVVDK----------------RKALEESFRVLKPGSRISVLDFNKS 182 (257)
Q Consensus 135 ~~--~~~~~~D~v~~~~------~l~~~~~~----------------~~~l~~~~~~Lk~gG~l~~~~~~~~ 182 (257)
.+ +++++||+|++.. ++++.++. ..++.++.+.|||||.+++.+.+..
T Consensus 307 ~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~ 378 (429)
T 1sqg_A 307 PSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVL 378 (429)
T ss_dssp THHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCC
T ss_pred chhhcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 65 4557899999743 23333332 4789999999999999998876553
No 228
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.48 E-value=2.1e-13 Score=108.49 Aligned_cols=97 Identities=14% Similarity=0.028 Sum_probs=73.3
Q ss_pred hCCCCCCeEEEecCCC------ChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeE-EEccCCCCCC
Q 025144 65 SGAKTGDNVLDVCCGS------GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEW-VEGDALDLPF 137 (257)
Q Consensus 65 ~~~~~~~~vLdiG~G~------G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~-~~~d~~~~~~ 137 (257)
+.+.++.+|||+|||+ |. ..+++..++..+|+++|+|+. + .++.+ +++|+.++++
T Consensus 59 l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v--------~~v~~~i~gD~~~~~~ 120 (290)
T 2xyq_A 59 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------V--------SDADSTLIGDCATVHT 120 (290)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------B--------CSSSEEEESCGGGCCC
T ss_pred cCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------C--------CCCEEEEECccccCCc
Confidence 4567888999999955 55 555666554679999999997 1 36888 9999988765
Q ss_pred CCCcccEEEecccccC-----------cccHHHHHHHHHhcccCCCEEEEEeec
Q 025144 138 SDCFFDAITMGYGLRN-----------VVDKRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 138 ~~~~~D~v~~~~~l~~-----------~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
+ ++||+|+++...+. ......+++.+.++|||||.+++..+.
T Consensus 121 ~-~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~ 173 (290)
T 2xyq_A 121 A-NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITE 173 (290)
T ss_dssp S-SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred c-CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 4 68999998654221 112357899999999999999886543
No 229
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.47 E-value=1.2e-12 Score=99.93 Aligned_cols=102 Identities=16% Similarity=0.095 Sum_probs=83.2
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEe
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 147 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 147 (257)
.++.+|||||||+|-++..+. +...|+++|+++.+++.+++++...+ .+..+...|....+.+ ++||+|++
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~----~~~~y~a~DId~~~i~~ar~~~~~~g----~~~~~~v~D~~~~~~~-~~~DvvLl 174 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER----GIASVWGCDIHQGLGDVITPFAREKD----WDFTFALQDVLCAPPA-EAGDLALI 174 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT----TCSEEEEEESBHHHHHHHHHHHHHTT----CEEEEEECCTTTSCCC-CBCSEEEE
T ss_pred CCCCeEEEecCCccHHHHHhc----cCCeEEEEeCCHHHHHHHHHHHHhcC----CCceEEEeecccCCCC-CCcchHHH
Confidence 567799999999999998877 56899999999999999999976554 5788999999886654 68999999
Q ss_pred cccccCccc-HHHHHHHHHhcccCCCEEEEEe
Q 025144 148 GYGLRNVVD-KRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 148 ~~~l~~~~~-~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
.-++|++++ ......++...|+++|.++-..
T Consensus 175 lk~lh~LE~q~~~~~~~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 175 FKLLPLLEREQAGSAMALLQSLNTPRMAVSFP 206 (253)
T ss_dssp ESCHHHHHHHSTTHHHHHHHHCBCSEEEEEEE
T ss_pred HHHHHHhhhhchhhHHHHHHHhcCCCEEEEcC
Confidence 999998863 2223338888999998875543
No 230
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.47 E-value=1.7e-13 Score=115.79 Aligned_cols=122 Identities=14% Similarity=0.239 Sum_probs=94.6
Q ss_pred HHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-C
Q 025144 59 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-F 137 (257)
Q Consensus 59 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-~ 137 (257)
..+...+...++.+|||+|||+|..+..+++.+++..+|+++|+|+.+++.++++++..+. . +.++++|..+++ .
T Consensus 91 ~l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~---~-v~~~~~Da~~l~~~ 166 (464)
T 3m6w_A 91 QAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGA---P-LAVTQAPPRALAEA 166 (464)
T ss_dssp HHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCC---C-CEEECSCHHHHHHH
T ss_pred HHHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---e-EEEEECCHHHhhhh
Confidence 3344556778889999999999999999999875557999999999999999999876552 3 889999987754 2
Q ss_pred CCCcccEEEeccc------ccCccc----------------HHHHHHHHHhcccCCCEEEEEeecCCCc
Q 025144 138 SDCFFDAITMGYG------LRNVVD----------------KRKALEESFRVLKPGSRISVLDFNKSTQ 184 (257)
Q Consensus 138 ~~~~~D~v~~~~~------l~~~~~----------------~~~~l~~~~~~Lk~gG~l~~~~~~~~~~ 184 (257)
.+++||+|++... +...++ ...+|+.+.++|||||.|+..+.+....
T Consensus 167 ~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~e 235 (464)
T 3m6w_A 167 FGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPE 235 (464)
T ss_dssp HCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGG
T ss_pred ccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCchh
Confidence 3578999996332 222222 1678999999999999998887665433
No 231
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.47 E-value=1.2e-12 Score=103.43 Aligned_cols=105 Identities=22% Similarity=0.302 Sum_probs=85.1
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEE
Q 025144 67 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAIT 146 (257)
Q Consensus 67 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 146 (257)
..++.+|||+|||+|.++..++.. ...+|+++|+|+.+++.++++++..+.. .++.++++|..++.. .+.||.|+
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~--g~~~V~avD~np~a~~~~~~N~~~N~v~--~~v~~~~~D~~~~~~-~~~~D~Vi 197 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVY--GKAKVIAIEKDPYTFKFLVENIHLNKVE--DRMSAYNMDNRDFPG-ENIADRIL 197 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHH--TCCEEEEECCCHHHHHHHHHHHHHTTCT--TTEEEECSCTTTCCC-CSCEEEEE
T ss_pred cCCCCEEEEecCcCcHHHHHHHHh--cCCeEEEEECCHHHHHHHHHHHHHcCCC--CcEEEEeCcHHHhcc-ccCCCEEE
Confidence 457889999999999999999887 3468999999999999999998765543 579999999988753 57899999
Q ss_pred ecccccCcccHHHHHHHHHhcccCCCEEEEEeec
Q 025144 147 MGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 147 ~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
++... ....++..+.++||+||.+.+.++.
T Consensus 198 ~~~p~----~~~~~l~~a~~~lk~gG~ih~~~~~ 227 (278)
T 3k6r_A 198 MGYVV----RTHEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp ECCCS----SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred ECCCC----cHHHHHHHHHHHcCCCCEEEEEeee
Confidence 86542 2345677788899999998765543
No 232
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.46 E-value=4.5e-13 Score=101.19 Aligned_cols=101 Identities=20% Similarity=0.264 Sum_probs=77.4
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCC--------ceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEE-EccCCCCC-
Q 025144 67 AKTGDNVLDVCCGSGDLSFLLSEQVGSQ--------GKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWV-EGDALDLP- 136 (257)
Q Consensus 67 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~--------~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~-~~d~~~~~- 136 (257)
+.++.+|||+|||+|.++..+++.+++. .+++++|+|+.. .. .++.++ ++|+.+..
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~------~~--------~~~~~~~~~d~~~~~~ 85 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF------PL--------EGATFLCPADVTDPRT 85 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC------CC--------TTCEEECSCCTTSHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc------cC--------CCCeEEEeccCCCHHH
Confidence 5678899999999999999999986432 799999999831 01 468888 88887642
Q ss_pred -------CCCCcccEEEecccccCc----ccH-------HHHHHHHHhcccCCCEEEEEeecC
Q 025144 137 -------FSDCFFDAITMGYGLRNV----VDK-------RKALEESFRVLKPGSRISVLDFNK 181 (257)
Q Consensus 137 -------~~~~~~D~v~~~~~l~~~----~~~-------~~~l~~~~~~Lk~gG~l~~~~~~~ 181 (257)
+++++||+|++...++.. .+. ..+++++.++|||||.+++..+..
T Consensus 86 ~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 148 (196)
T 2nyu_A 86 SQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG 148 (196)
T ss_dssp HHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred HHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 234689999997654432 222 478999999999999998877654
No 233
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.45 E-value=1.5e-12 Score=106.98 Aligned_cols=110 Identities=21% Similarity=0.235 Sum_probs=87.6
Q ss_pred CCCCCCeEEEecCCCChhHHHHHHHhCCC----ceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCc
Q 025144 66 GAKTGDNVLDVCCGSGDLSFLLSEQVGSQ----GKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCF 141 (257)
Q Consensus 66 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~----~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 141 (257)
...++.+|||+|||+|.++..+++.+... .+++|+|+++.+++.|+.+....+ .++.+.++|..... +.++
T Consensus 127 ~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g----~~~~i~~~D~l~~~-~~~~ 201 (344)
T 2f8l_A 127 QKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQR----QKMTLLHQDGLANL-LVDP 201 (344)
T ss_dssp TTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHT----CCCEEEESCTTSCC-CCCC
T ss_pred CCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCC----CCceEEECCCCCcc-ccCC
Confidence 44567799999999999999998876322 689999999999999999876443 36889999987633 3578
Q ss_pred ccEEEecccccCcccH------------------HHHHHHHHhcccCCCEEEEEeec
Q 025144 142 FDAITMGYGLRNVVDK------------------RKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 142 ~D~v~~~~~l~~~~~~------------------~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
||+|+++..+.+++.. ..++.++.+.|+|||.++++..+
T Consensus 202 fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~ 258 (344)
T 2f8l_A 202 VDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPD 258 (344)
T ss_dssp EEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEG
T ss_pred ccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECc
Confidence 9999999887655321 25799999999999999887643
No 234
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.44 E-value=1.4e-12 Score=104.33 Aligned_cols=113 Identities=22% Similarity=0.283 Sum_probs=84.8
Q ss_pred HHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCC
Q 025144 55 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD 134 (257)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 134 (257)
....+.+...+...++.+|||||||+|.++..+++. +.+++++|+|+.+++.++++....+.. +++.++++|+.+
T Consensus 14 ~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~--~~v~~~~~D~~~ 88 (285)
T 1zq9_A 14 PLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK---AKKVVACELDPRLVAELHKRVQGTPVA--SKLQVLVGDVLK 88 (285)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH---SSEEEEEESCHHHHHHHHHHHTTSTTG--GGEEEEESCTTT
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh---CCEEEEEECCHHHHHHHHHHHHhcCCC--CceEEEEcceec
Confidence 334556666777788889999999999999999987 369999999999999999987543221 479999999998
Q ss_pred CCCCCCcccEEEecccccCcccH-HHHHH--------------HH--HhcccCCCEE
Q 025144 135 LPFSDCFFDAITMGYGLRNVVDK-RKALE--------------ES--FRVLKPGSRI 174 (257)
Q Consensus 135 ~~~~~~~~D~v~~~~~l~~~~~~-~~~l~--------------~~--~~~Lk~gG~l 174 (257)
.+++ +||+|+++..++...+. ..++. ++ +++++|||.+
T Consensus 89 ~~~~--~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~ 143 (285)
T 1zq9_A 89 TDLP--FFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKL 143 (285)
T ss_dssp SCCC--CCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTT
T ss_pred ccch--hhcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCcc
Confidence 7654 79999997665544322 12222 12 3588999965
No 235
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.43 E-value=1.9e-13 Score=107.85 Aligned_cols=107 Identities=18% Similarity=0.099 Sum_probs=76.5
Q ss_pred hCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEE--EccCCCCCCCCCcc
Q 025144 65 SGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWV--EGDALDLPFSDCFF 142 (257)
Q Consensus 65 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~--~~d~~~~~~~~~~~ 142 (257)
..+.++.+|||+|||+|.++..+++. .+|+++|+++ |+..+++...... ....++.++ ++|+.+++ +++|
T Consensus 70 ~~~~~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~-m~~~a~~~~~~~~-~~~~~v~~~~~~~D~~~l~--~~~f 141 (265)
T 2oxt_A 70 GYVELTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYT-LGVGGHEVPRITE-SYGWNIVKFKSRVDIHTLP--VERT 141 (265)
T ss_dssp TSCCCCEEEEEESCTTSHHHHHHHTS----TTEEEEEEEC-CCCSSCCCCCCCC-BTTGGGEEEECSCCTTTSC--CCCC
T ss_pred CCCCCCCEEEEeCcCCCHHHHHHHHc----CcEEEEECch-hhhhhhhhhhhhh-ccCCCeEEEecccCHhHCC--CCCC
Confidence 44567889999999999999988865 5899999998 5433322110000 000268888 89998865 6789
Q ss_pred cEEEecccccCcccH----H---HHHHHHHhcccCCC--EEEEEeec
Q 025144 143 DAITMGYGLRNVVDK----R---KALEESFRVLKPGS--RISVLDFN 180 (257)
Q Consensus 143 D~v~~~~~l~~~~~~----~---~~l~~~~~~Lk~gG--~l~~~~~~ 180 (257)
|+|++..+ ++..+. . .+|..+.++||||| .+++..+.
T Consensus 142 D~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 142 DVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp SEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred cEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 99999876 443221 1 37899999999999 99887766
No 236
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.43 E-value=1.4e-13 Score=109.18 Aligned_cols=106 Identities=19% Similarity=0.189 Sum_probs=76.3
Q ss_pred CCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEE--EccCCCCCCCCCccc
Q 025144 66 GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWV--EGDALDLPFSDCFFD 143 (257)
Q Consensus 66 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~--~~d~~~~~~~~~~~D 143 (257)
...++.+|||+|||+|.++..+++. .+|+++|+++ |+..++++..... ....++.++ ++|+.+++ +++||
T Consensus 79 ~~~~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~-m~~~a~~~~~~~~-~~~~~v~~~~~~~D~~~l~--~~~fD 150 (276)
T 2wa2_A 79 GVELKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYT-LGTSGHEKPRLVE-TFGWNLITFKSKVDVTKME--PFQAD 150 (276)
T ss_dssp SCCCCEEEEEESCTTCHHHHHHHTS----TTEEEEEEEC-CCCTTSCCCCCCC-CTTGGGEEEECSCCGGGCC--CCCCS
T ss_pred CCCCCCEEEEeccCCCHHHHHHHHc----CCEEEEECch-hhhhhhhchhhhh-hcCCCeEEEeccCcHhhCC--CCCcC
Confidence 3567889999999999999998865 5899999998 6433322210000 000268888 89998865 67899
Q ss_pred EEEecccccCcccH----H---HHHHHHHhcccCCC--EEEEEeec
Q 025144 144 AITMGYGLRNVVDK----R---KALEESFRVLKPGS--RISVLDFN 180 (257)
Q Consensus 144 ~v~~~~~l~~~~~~----~---~~l~~~~~~Lk~gG--~l~~~~~~ 180 (257)
+|++..+ +...+. . .+|+.+.++||||| .+++..+.
T Consensus 151 ~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 151 TVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp EEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred EEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 9999876 433221 1 37899999999999 98887666
No 237
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.40 E-value=1e-12 Score=98.87 Aligned_cols=98 Identities=16% Similarity=0.314 Sum_probs=75.0
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCC-------C
Q 025144 67 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFS-------D 139 (257)
Q Consensus 67 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~-------~ 139 (257)
..++.+|||+|||+|.++..+++. ..+|+++|+++.. . .+++.++++|+.+.+.. .
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~------~--------~~~v~~~~~D~~~~~~~~~~~~~~~ 85 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME------E--------IAGVRFIRCDIFKETIFDDIDRALR 85 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC------C--------CTTCEEEECCTTSSSHHHHHHHHHH
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc------c--------CCCeEEEEccccCHHHHHHHHHHhh
Confidence 467889999999999999999876 5799999998741 1 15899999999885411 1
Q ss_pred ----CcccEEEecccccCcc----c-------HHHHHHHHHhcccCCCEEEEEeecC
Q 025144 140 ----CFFDAITMGYGLRNVV----D-------KRKALEESFRVLKPGSRISVLDFNK 181 (257)
Q Consensus 140 ----~~~D~v~~~~~l~~~~----~-------~~~~l~~~~~~Lk~gG~l~~~~~~~ 181 (257)
++||+|++........ + ....++.+.++|||||.+++..+..
T Consensus 86 ~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~ 142 (191)
T 3dou_A 86 EEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQG 142 (191)
T ss_dssp HHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred cccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCC
Confidence 4899999975433211 1 3567888999999999998776654
No 238
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.39 E-value=3.4e-12 Score=106.14 Aligned_cols=107 Identities=14% Similarity=0.141 Sum_probs=81.8
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-CCCCcccEEE
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-FSDCFFDAIT 146 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~v~ 146 (257)
.++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.++++++..+. ...+.++|+.+.. ...+.||+|+
T Consensus 213 ~~g~~VLDlg~GtG~~sl~~a~~---ga~V~avDis~~al~~a~~n~~~ng~----~~~~~~~D~~~~l~~~~~~fD~Ii 285 (393)
T 4dmg_A 213 RPGERVLDVYSYVGGFALRAARK---GAYALAVDKDLEALGVLDQAALRLGL----RVDIRHGEALPTLRGLEGPFHHVL 285 (393)
T ss_dssp CTTCEEEEESCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTC----CCEEEESCHHHHHHTCCCCEEEEE
T ss_pred cCCCeEEEcccchhHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHhCC----CCcEEEccHHHHHHHhcCCCCEEE
Confidence 35889999999999999999876 45699999999999999999876542 2356688887642 1134499999
Q ss_pred ecccccCc---------ccHHHHHHHHHhcccCCCEEEEEeecC
Q 025144 147 MGYGLRNV---------VDKRKALEESFRVLKPGSRISVLDFNK 181 (257)
Q Consensus 147 ~~~~l~~~---------~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 181 (257)
+....... .+...++..+.++|+|||.+++.+.+.
T Consensus 286 ~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~ 329 (393)
T 4dmg_A 286 LDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSY 329 (393)
T ss_dssp ECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred ECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 87553221 234678899999999999998766543
No 239
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.38 E-value=1.4e-11 Score=104.16 Aligned_cols=114 Identities=18% Similarity=0.344 Sum_probs=86.5
Q ss_pred HHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCC
Q 025144 54 HRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDAL 133 (257)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~ 133 (257)
.+.+.+.+...+...++.+|||+|||+|.++..+++. ..+|+++|+|+.+++.|+++.+..+. .++.++++|+.
T Consensus 271 ~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s~~al~~A~~n~~~~~~---~~v~f~~~d~~ 344 (433)
T 1uwv_A 271 NQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ---AASVVGVEGVPALVEKGQQNARLNGL---QNVTFYHENLE 344 (433)
T ss_dssp HHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHTTC---CSEEEEECCTT
T ss_pred HHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh---CCEEEEEeCCHHHHHHHHHHHHHcCC---CceEEEECCHH
Confidence 3445555666677777889999999999999999876 57999999999999999998865442 48999999998
Q ss_pred CC----CCCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEE
Q 025144 134 DL----PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVL 177 (257)
Q Consensus 134 ~~----~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~ 177 (257)
+. ++++++||+|+++..-... ..+++.+.+ ++|++.+++.
T Consensus 345 ~~l~~~~~~~~~fD~Vv~dPPr~g~---~~~~~~l~~-~~p~~ivyvs 388 (433)
T 1uwv_A 345 EDVTKQPWAKNGFDKVLLDPARAGA---AGVMQQIIK-LEPIRIVYVS 388 (433)
T ss_dssp SCCSSSGGGTTCCSEEEECCCTTCC---HHHHHHHHH-HCCSEEEEEE
T ss_pred HHhhhhhhhcCCCCEEEECCCCccH---HHHHHHHHh-cCCCeEEEEE
Confidence 73 2345689999986654433 245555543 6888877664
No 240
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.38 E-value=9.1e-12 Score=104.22 Aligned_cols=109 Identities=18% Similarity=0.214 Sum_probs=86.3
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhh-ccCCCeeEEEccCCCCCC----CCCcc
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSK-ACYKNIEWVEGDALDLPF----SDCFF 142 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~-~~~~~~~~~~~d~~~~~~----~~~~~ 142 (257)
.++.+|||+|||+|.++..+++. + ..+|+++|+|+.+++.|+++++..+. . .++.++++|+.+... ..++|
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~-g-~~~V~~vD~s~~al~~a~~n~~~ngl~~--~~v~~~~~D~~~~~~~~~~~~~~f 294 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMG-G-CSQVVSVDTSQEALDIARQNVELNKLDL--SKAEFVRDDVFKLLRTYRDRGEKF 294 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHTTCCG--GGEEEEESCHHHHHHHHHHTTCCE
T ss_pred hCCCeEEEeeccCCHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHcCCCc--cceEEEECCHHHHHHHHHhcCCCC
Confidence 46789999999999999999876 2 35899999999999999999865442 2 378999999876421 14689
Q ss_pred cEEEecccc---------cCcccHHHHHHHHHhcccCCCEEEEEeec
Q 025144 143 DAITMGYGL---------RNVVDKRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 143 D~v~~~~~l---------~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
|+|++.... ....+...++..+.+.|+|||.+++.+..
T Consensus 295 D~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 295 DVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp EEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 999997543 22245678899999999999999887644
No 241
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.37 E-value=1e-12 Score=109.39 Aligned_cols=109 Identities=16% Similarity=0.157 Sum_probs=83.9
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCC-CeeEEEccCCCC-C-C--CCCcc
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYK-NIEWVEGDALDL-P-F--SDCFF 142 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~-~~~~~~~d~~~~-~-~--~~~~~ 142 (257)
.++.+|||+|||+|.++..+++. ...+|+++|+|+.+++.|+++++..+.. . ++.++++|+.+. + . ..++|
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~--ga~~V~~vD~s~~al~~A~~N~~~n~~~--~~~v~~~~~D~~~~l~~~~~~~~~f 286 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMG--GAMATTSVDLAKRSRALSLAHFEANHLD--MANHQLVVMDVFDYFKYARRHHLTY 286 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHT--TBSEEEEEESCTTHHHHHHHHHHHTTCC--CTTEEEEESCHHHHHHHHHHTTCCE
T ss_pred cCCCeEEEEeeccCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCC--ccceEEEECCHHHHHHHHHHhCCCc
Confidence 56789999999999999999875 1348999999999999999998765432 2 799999998763 2 1 24589
Q ss_pred cEEEeccccc-----Ccc----cHHHHHHHHHhcccCCCEEEEEeec
Q 025144 143 DAITMGYGLR-----NVV----DKRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 143 D~v~~~~~l~-----~~~----~~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
|+|++..... ... +...++..+.++|+|||.+++....
T Consensus 287 D~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~ 333 (385)
T 2b78_A 287 DIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNA 333 (385)
T ss_dssp EEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 9999865442 222 3455778889999999999877644
No 242
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.35 E-value=1.6e-12 Score=104.70 Aligned_cols=105 Identities=16% Similarity=0.194 Sum_probs=74.2
Q ss_pred CCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeC----ChhHHHHHHhhhhhhhhccCCCeeEEEc-cCCCCCCCCC
Q 025144 66 GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDF----SKNQLSMASSRQDLVSKACYKNIEWVEG-DALDLPFSDC 140 (257)
Q Consensus 66 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~----s~~~~~~a~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~ 140 (257)
.+.++.+|||+|||+|.++..+++. .+|+++|+ ++.+++.+. .+..+ .+++.++++ |+..++ .+
T Consensus 79 ~~~~g~~VLDlGcG~G~~s~~la~~----~~V~gvD~~~~~~~~~~~~~~--~~~~~---~~~v~~~~~~D~~~l~--~~ 147 (305)
T 2p41_A 79 LVTPEGKVVDLGCGRGGWSYYCGGL----KNVREVKGLTKGGPGHEEPIP--MSTYG---WNLVRLQSGVDVFFIP--PE 147 (305)
T ss_dssp SSCCCEEEEEETCTTSHHHHHHHTS----TTEEEEEEECCCSTTSCCCCC--CCSTT---GGGEEEECSCCTTTSC--CC
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHhc----CCEEEEeccccCchhHHHHHH--hhhcC---CCCeEEEeccccccCC--cC
Confidence 3466789999999999999999865 47999999 564432111 11111 147899998 887764 56
Q ss_pred cccEEEeccccc---CcccHH---HHHHHHHhcccCCCEEEEEeecC
Q 025144 141 FFDAITMGYGLR---NVVDKR---KALEESFRVLKPGSRISVLDFNK 181 (257)
Q Consensus 141 ~~D~v~~~~~l~---~~~~~~---~~l~~~~~~Lk~gG~l~~~~~~~ 181 (257)
+||+|++..+++ +..+.. ..|..+.++|||||.+++..+..
T Consensus 148 ~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 148 RCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp CCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred CCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 899999977653 222222 57888999999999987755443
No 243
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.35 E-value=6.2e-12 Score=102.88 Aligned_cols=101 Identities=16% Similarity=0.251 Sum_probs=83.0
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEe
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 147 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 147 (257)
.++.+|||+|||+|.++.. ++ ...+|+++|+|+.+++.++++++..+.. .++.++++|+.+.. ++||+|++
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~---~~~~V~~vD~s~~ai~~a~~n~~~n~l~--~~v~~~~~D~~~~~---~~fD~Vi~ 264 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK---NAKKIYAIDINPHAIELLKKNIKLNKLE--HKIIPILSDVREVD---VKGNRVIM 264 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT---TSSEEEEEESCHHHHHHHHHHHHHTTCT--TTEEEEESCGGGCC---CCEEEEEE
T ss_pred CCCCEEEEccCccCHHHHh-cc---CCCEEEEEECCHHHHHHHHHHHHHcCCC--CcEEEEECChHHhc---CCCcEEEE
Confidence 4678999999999999998 75 2579999999999999999998765432 47999999998864 78999998
Q ss_pred cccccCcccHHHHHHHHHhcccCCCEEEEEeecC
Q 025144 148 GYGLRNVVDKRKALEESFRVLKPGSRISVLDFNK 181 (257)
Q Consensus 148 ~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 181 (257)
..... ...++..+.++|+|||.+++.++..
T Consensus 265 dpP~~----~~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 265 NLPKF----AHKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp CCTTT----GGGGHHHHHHHEEEEEEEEEEEEES
T ss_pred CCcHh----HHHHHHHHHHHcCCCCEEEEEEeec
Confidence 64322 2377888999999999998877654
No 244
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.34 E-value=2.7e-12 Score=107.47 Aligned_cols=110 Identities=18% Similarity=0.223 Sum_probs=86.8
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCC----CCCccc
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF----SDCFFD 143 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~~D 143 (257)
.++.+|||+|||+|.++..+++. ...+|+++|+|+.+++.++++++..+.. .++.++++|+.+... ..++||
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~--g~~~v~~vD~s~~~l~~a~~n~~~n~~~--~~v~~~~~d~~~~~~~~~~~~~~fD 291 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIA--GADEVIGIDKSPRAIETAKENAKLNGVE--DRMKFIVGSAFEEMEKLQKKGEKFD 291 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCG--GGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred hCCCeEEEecCCCCHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHHHHcCCC--ccceEEECCHHHHHHHHHhhCCCCC
Confidence 36789999999999999999876 2358999999999999999998655432 379999999876421 246899
Q ss_pred EEEecccccCc---------ccHHHHHHHHHhcccCCCEEEEEeecC
Q 025144 144 AITMGYGLRNV---------VDKRKALEESFRVLKPGSRISVLDFNK 181 (257)
Q Consensus 144 ~v~~~~~l~~~---------~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 181 (257)
+|++....... .+...++..+.+.|+|||.+++.+.+.
T Consensus 292 ~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 292 IVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp EEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 99996543221 346778999999999999998877554
No 245
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.34 E-value=1e-11 Score=99.19 Aligned_cols=91 Identities=24% Similarity=0.316 Sum_probs=76.8
Q ss_pred HHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCC
Q 025144 54 HRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDAL 133 (257)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~ 133 (257)
...+.+.+...+...++.+|||||||+|.++..+++. ..+|+++|+++.+++.+++++... +++.++++|+.
T Consensus 35 d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~---~~~V~aVEid~~li~~a~~~~~~~-----~~v~vi~gD~l 106 (295)
T 3gru_A 35 DKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKN---AKKVYVIEIDKSLEPYANKLKELY-----NNIEIIWGDAL 106 (295)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCGGGHHHHHHHHHHC-----SSEEEEESCTT
T ss_pred CHHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHhccC-----CCeEEEECchh
Confidence 3445566777778888899999999999999999987 469999999999999999987622 68999999999
Q ss_pred CCCCCCCcccEEEeccccc
Q 025144 134 DLPFSDCFFDAITMGYGLR 152 (257)
Q Consensus 134 ~~~~~~~~~D~v~~~~~l~ 152 (257)
++++++.+||+|+++..++
T Consensus 107 ~~~~~~~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 107 KVDLNKLDFNKVVANLPYQ 125 (295)
T ss_dssp TSCGGGSCCSEEEEECCGG
T ss_pred hCCcccCCccEEEEeCccc
Confidence 9877777899999876554
No 246
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.33 E-value=7.5e-12 Score=100.70 Aligned_cols=109 Identities=27% Similarity=0.265 Sum_probs=79.0
Q ss_pred HHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC
Q 025144 56 IWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL 135 (257)
Q Consensus 56 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 135 (257)
.+.+.+...+...++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.++++....+. +++.++++|+.+.
T Consensus 29 ~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~---~~~v~~vDi~~~~~~~a~~~~~~~~~---~~v~~~~~D~~~~ 102 (299)
T 2h1r_A 29 GILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL---AKKVITIDIDSRMISEVKKRCLYEGY---NNLEVYEGDAIKT 102 (299)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT---SSEEEEECSCHHHHHHHHHHHHHTTC---CCEEC----CCSS
T ss_pred HHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCC---CceEEEECchhhC
Confidence 34555666677788889999999999999999875 46999999999999999998754322 5899999999887
Q ss_pred CCCCCcccEEEecccccCccc-HHHHH---------------HHHHhcccCCC
Q 025144 136 PFSDCFFDAITMGYGLRNVVD-KRKAL---------------EESFRVLKPGS 172 (257)
Q Consensus 136 ~~~~~~~D~v~~~~~l~~~~~-~~~~l---------------~~~~~~Lk~gG 172 (257)
++ ++||+|+++...+.... ...++ +...++++++|
T Consensus 103 ~~--~~~D~Vv~n~py~~~~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G 153 (299)
T 2h1r_A 103 VF--PKFDVCTANIPYKISSPLIFKLISHRPLFKCAVLMFQKEFAERMLANVG 153 (299)
T ss_dssp CC--CCCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTT
T ss_pred Cc--ccCCEEEEcCCcccccHHHHHHHhcCCccceeeehHHHHHHHHHhcCCC
Confidence 64 47999999766554322 12333 34567788876
No 247
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.32 E-value=4.9e-11 Score=99.09 Aligned_cols=123 Identities=16% Similarity=0.159 Sum_probs=94.5
Q ss_pred HHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhC-------------------------------------CCce
Q 025144 54 HRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVG-------------------------------------SQGK 96 (257)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-------------------------------------~~~~ 96 (257)
.+.+...++......++.+|||++||+|.+++.++.... +..+
T Consensus 180 ~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 259 (385)
T 3ldu_A 180 RETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFK 259 (385)
T ss_dssp CHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCC
T ss_pred cHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCce
Confidence 344556666777778889999999999999998877631 1157
Q ss_pred EEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEecccccCc----ccHHHHHHHHHhcccC--
Q 025144 97 VIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGYGLRNV----VDKRKALEESFRVLKP-- 170 (257)
Q Consensus 97 v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~----~~~~~~l~~~~~~Lk~-- 170 (257)
|+|+|+++.+++.|++++...+.. .++.+.++|+.+++.+ ++||+|+++..+..- .+...+.+.+.+.||+
T Consensus 260 V~GvDid~~ai~~Ar~Na~~~gl~--~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~ 336 (385)
T 3ldu_A 260 IYGYDIDEESIDIARENAEIAGVD--EYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLK 336 (385)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTCG--GGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSB
T ss_pred EEEEECCHHHHHHHHHHHHHcCCC--CceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCC
Confidence 999999999999999998765543 4799999999987654 689999998876532 2456677777777776
Q ss_pred CCEEEEEee
Q 025144 171 GSRISVLDF 179 (257)
Q Consensus 171 gG~l~~~~~ 179 (257)
|+.+++.+.
T Consensus 337 g~~~~iit~ 345 (385)
T 3ldu_A 337 NWSYYLITS 345 (385)
T ss_dssp SCEEEEEES
T ss_pred CCEEEEEEC
Confidence 888877653
No 248
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.32 E-value=7.7e-11 Score=98.08 Aligned_cols=123 Identities=15% Similarity=0.087 Sum_probs=93.0
Q ss_pred HHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCC-------------------------------------Cce
Q 025144 54 HRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGS-------------------------------------QGK 96 (257)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~-------------------------------------~~~ 96 (257)
.+.+...++......++..|||++||+|.+++.++..... ..+
T Consensus 186 ~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 265 (393)
T 3k0b_A 186 KETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLN 265 (393)
T ss_dssp CHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCC
T ss_pred cHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCce
Confidence 3445566677777788899999999999999888765311 146
Q ss_pred EEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEecccccCc----ccHHHHHHHHHhcccC--
Q 025144 97 VIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGYGLRNV----VDKRKALEESFRVLKP-- 170 (257)
Q Consensus 97 v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~----~~~~~~l~~~~~~Lk~-- 170 (257)
++|+|+++.|++.|++++...+.. .++.+.++|+.+++.+ ++||+|+++..+..- .+...+.+.+.+.||+
T Consensus 266 V~GvDid~~al~~Ar~Na~~~gl~--~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~ 342 (393)
T 3k0b_A 266 IIGGDIDARLIEIAKQNAVEAGLG--DLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMP 342 (393)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCT--TCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCT
T ss_pred EEEEECCHHHHHHHHHHHHHcCCC--CceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCC
Confidence 999999999999999998765543 4699999999987654 589999998765432 2345566666667766
Q ss_pred CCEEEEEee
Q 025144 171 GSRISVLDF 179 (257)
Q Consensus 171 gG~l~~~~~ 179 (257)
||.+++.+.
T Consensus 343 g~~~~iit~ 351 (393)
T 3k0b_A 343 TWSVYVLTS 351 (393)
T ss_dssp TCEEEEEEC
T ss_pred CCEEEEEEC
Confidence 888877653
No 249
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.32 E-value=7.7e-11 Score=94.95 Aligned_cols=120 Identities=18% Similarity=0.219 Sum_probs=89.1
Q ss_pred HHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCC
Q 025144 60 MAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSD 139 (257)
Q Consensus 60 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 139 (257)
.+...+...++.+|||+|||+|..+..+++.+++..+|+++|+++.+++.++++++..+. .++.++++|+.++....
T Consensus 93 l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~---~~v~~~~~D~~~~~~~~ 169 (309)
T 2b9e_A 93 LPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGV---SCCELAEEDFLAVSPSD 169 (309)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC---CSEEEEECCGGGSCTTC
T ss_pred HHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC---CeEEEEeCChHhcCccc
Confidence 344456778889999999999999999999876667999999999999999999876653 47999999998764321
Q ss_pred ---CcccEEEeccc------ccCcc-----------cH-------HHHHHHHHhcccCCCEEEEEeecCCC
Q 025144 140 ---CFFDAITMGYG------LRNVV-----------DK-------RKALEESFRVLKPGSRISVLDFNKST 183 (257)
Q Consensus 140 ---~~~D~v~~~~~------l~~~~-----------~~-------~~~l~~~~~~Lk~gG~l~~~~~~~~~ 183 (257)
++||.|++... +..-+ +. ..+|....+.++ ||.++..+.+...
T Consensus 170 ~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~ 239 (309)
T 2b9e_A 170 PRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQ 239 (309)
T ss_dssp GGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCG
T ss_pred cccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCCh
Confidence 57999997422 21111 11 245777777786 8988877665433
No 250
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.31 E-value=8.7e-12 Score=111.09 Aligned_cols=121 Identities=20% Similarity=0.228 Sum_probs=90.5
Q ss_pred HHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCC
Q 025144 54 HRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDAL 133 (257)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~ 133 (257)
++..++.+... .++.+|||+|||+|.++..++.. + ..+|+++|+|+.+++.++++++..+.. ..++.++++|+.
T Consensus 527 ~r~~r~~l~~~---~~g~~VLDlg~GtG~~sl~aa~~-g-a~~V~aVD~s~~al~~a~~N~~~ngl~-~~~v~~i~~D~~ 600 (703)
T 3v97_A 527 HRIARRMLGQM---SKGKDFLNLFSYTGSATVHAGLG-G-ARSTTTVDMSRTYLEWAERNLRLNGLT-GRAHRLIQADCL 600 (703)
T ss_dssp GHHHHHHHHHH---CTTCEEEEESCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHTTCC-STTEEEEESCHH
T ss_pred HHHHHHHHHHh---cCCCcEEEeeechhHHHHHHHHC-C-CCEEEEEeCCHHHHHHHHHHHHHcCCC-ccceEEEecCHH
Confidence 33444444433 35789999999999999998875 2 347999999999999999998765431 137999999998
Q ss_pred CC-CCCCCcccEEEecccc-----------cCcccHHHHHHHHHhcccCCCEEEEEeec
Q 025144 134 DL-PFSDCFFDAITMGYGL-----------RNVVDKRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 134 ~~-~~~~~~~D~v~~~~~l-----------~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
+. +...++||+|++.... ....+...++..+.++|+|||.+++....
T Consensus 601 ~~l~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 601 AWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp HHHHHCCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred HHHHhcCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 73 3335789999986542 22345677899999999999999876544
No 251
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.31 E-value=3.6e-12 Score=106.13 Aligned_cols=107 Identities=21% Similarity=0.250 Sum_probs=85.6
Q ss_pred CCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCC----CCCcccE
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF----SDCFFDA 144 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~~D~ 144 (257)
++.+|||+|||+|.++..+++. ..+|+++|+|+.+++.++++++..+. .++.++++|+.+... .+++||+
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~---~~~~~~~~d~~~~~~~~~~~~~~fD~ 282 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGL---GNVRVLEANAFDLLRRLEKEGERFDL 282 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTC---TTEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCC---CCceEEECCHHHHHHHHHhcCCCeeE
Confidence 6779999999999999999987 46899999999999999999865543 359999999876421 1468999
Q ss_pred EEecccccCc---------ccHHHHHHHHHhcccCCCEEEEEeecC
Q 025144 145 ITMGYGLRNV---------VDKRKALEESFRVLKPGSRISVLDFNK 181 (257)
Q Consensus 145 v~~~~~l~~~---------~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 181 (257)
|++....... .+...++..+.++|+|||.+++.+...
T Consensus 283 Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 283 VVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp EEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred EEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 9986543221 345678999999999999998876543
No 252
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.31 E-value=1.3e-10 Score=96.22 Aligned_cols=123 Identities=13% Similarity=0.060 Sum_probs=94.5
Q ss_pred HHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCC-------------------------------------Cce
Q 025144 54 HRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGS-------------------------------------QGK 96 (257)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~-------------------------------------~~~ 96 (257)
.+.+...++......++..|||.+||+|.+++..+..... ..+
T Consensus 179 ~e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 258 (384)
T 3ldg_A 179 KENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLD 258 (384)
T ss_dssp CHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCC
T ss_pred cHHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCce
Confidence 3455666677777788899999999999999888765311 146
Q ss_pred EEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEecccccCc----ccHHHHHHHHHhcccC--
Q 025144 97 VIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGYGLRNV----VDKRKALEESFRVLKP-- 170 (257)
Q Consensus 97 v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~----~~~~~~l~~~~~~Lk~-- 170 (257)
++|+|+++.|++.|++++...+.. .++.+.++|+.+++.+ ++||+|+++..+..- .+...+++.+.+.||+
T Consensus 259 v~GvDid~~al~~Ar~Na~~~gl~--~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~ 335 (384)
T 3ldg_A 259 ISGFDFDGRMVEIARKNAREVGLE--DVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLK 335 (384)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCT--TTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCT
T ss_pred EEEEECCHHHHHHHHHHHHHcCCC--CceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCC
Confidence 999999999999999998766543 4699999999987754 589999998765422 3456677777777776
Q ss_pred CCEEEEEee
Q 025144 171 GSRISVLDF 179 (257)
Q Consensus 171 gG~l~~~~~ 179 (257)
||.+++.+.
T Consensus 336 g~~~~iit~ 344 (384)
T 3ldg_A 336 TWSQFILTN 344 (384)
T ss_dssp TSEEEEEES
T ss_pred CcEEEEEEC
Confidence 888877653
No 253
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.30 E-value=2.2e-11 Score=103.35 Aligned_cols=150 Identities=17% Similarity=0.172 Sum_probs=104.7
Q ss_pred chhHHHHhhhhhhhhhhhhhhh--hhhhHHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhC------------C
Q 025144 28 SSERQELFSRIAPVYDNLNDLL--SFGQHRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVG------------S 93 (257)
Q Consensus 28 ~~~~~~~y~~~a~~y~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~------------~ 93 (257)
.+...+.|+.....+....... .+-..+...+.+...+...++.+|||+|||+|.++..+.+.+. +
T Consensus 128 ~d~~G~~yE~ll~~~~~~~~~~~G~fyTP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~ 207 (445)
T 2okc_A 128 GDVKGAIYESILEKNGQDKKSGAGQYFTPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLR 207 (445)
T ss_dssp SHHHHHHHHHHHHHHHTCTTTCCGGGCCCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhhccccCCcccCcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhc
Confidence 4556666666554443221110 1111344556677777777788999999999999998887631 2
Q ss_pred CceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEecccccCccc-----------------
Q 025144 94 QGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGYGLRNVVD----------------- 156 (257)
Q Consensus 94 ~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~----------------- 156 (257)
..+++|+|+++.+++.|+.++...+.. ..+..+.++|....+.. ++||+|+++..+.....
T Consensus 208 ~~~i~G~Ei~~~~~~lA~~nl~l~g~~-~~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~ 285 (445)
T 2okc_A 208 DKALHGVDNTPLVVTLASMNLYLHGIG-TDRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNN 285 (445)
T ss_dssp HTTEEEEESCHHHHHHHHHHHHHTTCC-SSCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCH
T ss_pred CeEEEEEeCCHHHHHHHHHHHHHhCCC-cCCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcch
Confidence 357999999999999999887543321 01678999998876543 48999999877665421
Q ss_pred HHHHHHHHHhcccCCCEEEEEee
Q 025144 157 KRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 157 ~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
...++.++.+.|||||.+.++.+
T Consensus 286 ~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 286 QLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHhccCCEEEEEEC
Confidence 14789999999999999987764
No 254
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.29 E-value=2e-11 Score=95.34 Aligned_cols=87 Identities=13% Similarity=0.170 Sum_probs=69.2
Q ss_pred HHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCC
Q 025144 55 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD 134 (257)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 134 (257)
..+.+.+...+...++.+|||+|||+|.++..+++. +.+++++|+|+.+++.++++.... +++.++++|+.+
T Consensus 16 ~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~-----~~v~~~~~D~~~ 87 (244)
T 1qam_A 16 KHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQR---CNFVTAIEIDHKLCKTTENKLVDH-----DNFQVLNKDILQ 87 (244)
T ss_dssp HHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHTTTC-----CSEEEECCCGGG
T ss_pred HHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHc---CCeEEEEECCHHHHHHHHHhhccC-----CCeEEEEChHHh
Confidence 445566667777778889999999999999999988 379999999999999999887532 589999999998
Q ss_pred CCCCC-CcccEEEeccc
Q 025144 135 LPFSD-CFFDAITMGYG 150 (257)
Q Consensus 135 ~~~~~-~~~D~v~~~~~ 150 (257)
+++++ ..| .|+++..
T Consensus 88 ~~~~~~~~~-~vv~nlP 103 (244)
T 1qam_A 88 FKFPKNQSY-KIFGNIP 103 (244)
T ss_dssp CCCCSSCCC-EEEEECC
T ss_pred CCcccCCCe-EEEEeCC
Confidence 87653 345 4555443
No 255
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.26 E-value=2.5e-11 Score=102.46 Aligned_cols=112 Identities=23% Similarity=0.239 Sum_probs=85.2
Q ss_pred HHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC
Q 025144 56 IWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL 135 (257)
Q Consensus 56 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 135 (257)
...+.+...+...++.+|||+|||+|.++..+++++++..+++|+|+++.+++.| .++.++++|+.+.
T Consensus 26 ~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a------------~~~~~~~~D~~~~ 93 (421)
T 2ih2_A 26 EVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP------------PWAEGILADFLLW 93 (421)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC------------TTEEEEESCGGGC
T ss_pred HHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC------------CCCcEEeCChhhc
Confidence 3445555556555567999999999999999998864567999999999988765 3688999999876
Q ss_pred CCCCCcccEEEecccccCcc----------c-------------------HHHHHHHHHhcccCCCEEEEEeec
Q 025144 136 PFSDCFFDAITMGYGLRNVV----------D-------------------KRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 136 ~~~~~~~D~v~~~~~l~~~~----------~-------------------~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
.. .++||+|+++..+.... + ...+++++.++|+|||.++++...
T Consensus 94 ~~-~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 94 EP-GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp CC-SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred Cc-cCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 43 46899999975443221 1 125688999999999999887654
No 256
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=99.25 E-value=2.4e-10 Score=93.97 Aligned_cols=162 Identities=12% Similarity=0.042 Sum_probs=100.2
Q ss_pred CCeEEEecCCCChhHHHHHHH-------------h---CCCceEEEEeCC-----------hhHHHHHHhhhhhhhhccC
Q 025144 70 GDNVLDVCCGSGDLSFLLSEQ-------------V---GSQGKVIGLDFS-----------KNQLSMASSRQDLVSKACY 122 (257)
Q Consensus 70 ~~~vLdiG~G~G~~~~~l~~~-------------~---~~~~~v~~~D~s-----------~~~~~~a~~~~~~~~~~~~ 122 (257)
.-+|+|+||++|..+..+... . .|..++...|+. +.+.+.+++.. +..
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~---g~~-- 127 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKEN---GRK-- 127 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHT---CCC--
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhc---cCC--
Confidence 468999999999999877765 1 245688899986 33333322211 100
Q ss_pred CCeeEEEccCCC---CCCCCCcccEEEecccccCcccHH---------------------------------------HH
Q 025144 123 KNIEWVEGDALD---LPFSDCFFDAITMGYGLRNVVDKR---------------------------------------KA 160 (257)
Q Consensus 123 ~~~~~~~~d~~~---~~~~~~~~D~v~~~~~l~~~~~~~---------------------------------------~~ 160 (257)
.+..++.+...+ -.+|++++|+|+++.+|||+.+.+ .+
T Consensus 128 ~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~F 207 (384)
T 2efj_A 128 IGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTF 207 (384)
T ss_dssp TTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 134566665555 358899999999999999985432 12
Q ss_pred HHHHHhcccCCCEEEEEeecCCCc--h------hHHHHHHHHHhhhhhhhhccCCchhhhhhhHHHHhccCCHHHHHHHH
Q 025144 161 LEESFRVLKPGSRISVLDFNKSTQ--P------FTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLA 232 (257)
Q Consensus 161 l~~~~~~Lk~gG~l~~~~~~~~~~--~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 232 (257)
|+..++.|+|||.+++......+. . ....+.....++.+... ....+. ....+.+.++++.++
T Consensus 208 L~~Ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~e-k~dsf~--------~P~y~ps~~E~~~~l 278 (384)
T 2efj_A 208 LRIHSEELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEE-KLDSFN--------VPIYAPSTEEVKRIV 278 (384)
T ss_dssp HHHHHHHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHH-HHHTCC--------CSBCCCCHHHHHHHH
T ss_pred HHHHHHHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchh-hhcccC--------CcccCCCHHHHHHHH
Confidence 666689999999999988877664 2 22222222222111110 000000 001246999999999
Q ss_pred HHcC-ceeeEEeee
Q 025144 233 LEIG-FSRAKHYEL 245 (257)
Q Consensus 233 ~~~G-f~~~~~~~~ 245 (257)
++.| |++.....+
T Consensus 279 e~~g~F~i~~le~~ 292 (384)
T 2efj_A 279 EEEGSFEILYLETF 292 (384)
T ss_dssp HHHCSEEEEEEEEE
T ss_pred HHcCCceEEEEEEE
Confidence 9985 888776544
No 257
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.23 E-value=1.8e-10 Score=96.90 Aligned_cols=100 Identities=18% Similarity=0.258 Sum_probs=77.5
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEE
Q 025144 67 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAIT 146 (257)
Q Consensus 67 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 146 (257)
..++.+|||+|||+|.++..+++. ..+|+++|+|+.+++.|+++.+..+. . +.++.+|+.+... .+||+|+
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~---~~~V~gvD~s~~ai~~A~~n~~~ngl---~-v~~~~~d~~~~~~--~~fD~Vv 358 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR---GFNVKGFDSNEFAIEMARRNVEINNV---D-AEFEVASDREVSV--KGFDTVI 358 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTC---C-EEEEECCTTTCCC--TTCSEEE
T ss_pred cCCCCEEEEeeccchHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCC---c-EEEEECChHHcCc--cCCCEEE
Confidence 456789999999999999999876 46999999999999999998865432 3 8999999988642 3799999
Q ss_pred ecccccCcccHHHHHHHHHhcccCCCEEEEEe
Q 025144 147 MGYGLRNVVDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 147 ~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
+...-... ...+++.+. .|+|+|.+++..
T Consensus 359 ~dPPr~g~--~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 359 VDPPRAGL--HPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp ECCCTTCS--CHHHHHHHH-HHCCSEEEEEES
T ss_pred EcCCccch--HHHHHHHHH-hcCCCcEEEEEC
Confidence 96553222 134555554 489999987764
No 258
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.23 E-value=5.8e-11 Score=96.45 Aligned_cols=110 Identities=13% Similarity=0.038 Sum_probs=80.0
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhc--c---CCCeeEEEccCCCCCC----C
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKA--C---YKNIEWVEGDALDLPF----S 138 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~--~---~~~~~~~~~d~~~~~~----~ 138 (257)
+.+.+||+||||+|..++.+++. ++ .+++++|+++.+++.|++.+...... . .++++++.+|...... .
T Consensus 187 p~pkrVL~IGgG~G~~arellk~-~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~ 264 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKL-KP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE 264 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTT-CC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH
T ss_pred CCCCEEEEEECChhHHHHHHHHC-CC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhcc
Confidence 35679999999999999999887 34 78999999999999999987532210 0 0279999999987431 3
Q ss_pred CCcccEEEecccc-cC--cc---cHHHHHHHH----HhcccCCCEEEEEee
Q 025144 139 DCFFDAITMGYGL-RN--VV---DKRKALEES----FRVLKPGSRISVLDF 179 (257)
Q Consensus 139 ~~~~D~v~~~~~l-~~--~~---~~~~~l~~~----~~~Lk~gG~l~~~~~ 179 (257)
+++||+|++...- .. .+ --..+++.+ .++|+|||.+++...
T Consensus 265 ~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~ 315 (364)
T 2qfm_A 265 GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 315 (364)
T ss_dssp TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcC
Confidence 5789999986532 11 11 124556666 899999999977643
No 259
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.21 E-value=2.2e-12 Score=100.98 Aligned_cols=111 Identities=16% Similarity=0.221 Sum_probs=82.9
Q ss_pred HHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCC
Q 025144 58 KRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF 137 (257)
Q Consensus 58 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~ 137 (257)
.+.+...+...++.+|||+|||+|.++..+++. +.+++++|+|+.+++.++++... ..++.++++|+.++++
T Consensus 18 ~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~---~~~v~~id~~~~~~~~a~~~~~~-----~~~v~~~~~D~~~~~~ 89 (245)
T 1yub_A 18 LNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKI---SKQVTSIELDSHLFNLSSEKLKL-----NTRVTLIHQDILQFQF 89 (245)
T ss_dssp HHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHH---SSEEEESSSSCSSSSSSSCTTTT-----CSEEEECCSCCTTTTC
T ss_pred HHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHh---CCeEEEEECCHHHHHHHHHHhcc-----CCceEEEECChhhcCc
Confidence 344556667778889999999999999999987 37999999999999998887652 1589999999999876
Q ss_pred CC-CcccEEEecccccCc-----------ccHHHHH----HHHHhcccCCCEEEEE
Q 025144 138 SD-CFFDAITMGYGLRNV-----------VDKRKAL----EESFRVLKPGSRISVL 177 (257)
Q Consensus 138 ~~-~~~D~v~~~~~l~~~-----------~~~~~~l----~~~~~~Lk~gG~l~~~ 177 (257)
+. ++| .|+++...+.. ......+ +.+.++|+|||.+.+.
T Consensus 90 ~~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~ 144 (245)
T 1yub_A 90 PNKQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLL 144 (245)
T ss_dssp CCSSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHH
T ss_pred ccCCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhh
Confidence 53 678 66665433321 1112223 6688999999987653
No 260
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=99.21 E-value=7.8e-10 Score=90.89 Aligned_cols=176 Identities=14% Similarity=0.067 Sum_probs=100.0
Q ss_pred CCeEEEecCCCChhHHHHHHH--------h------CCCceEEEEeCChhHHHHHHhhhhhhhh---------ccCCCee
Q 025144 70 GDNVLDVCCGSGDLSFLLSEQ--------V------GSQGKVIGLDFSKNQLSMASSRQDLVSK---------ACYKNIE 126 (257)
Q Consensus 70 ~~~vLdiG~G~G~~~~~l~~~--------~------~~~~~v~~~D~s~~~~~~a~~~~~~~~~---------~~~~~~~ 126 (257)
..+|+|+|||+|..+..+... . .|..++...|+....-...=+.+..... ....+..
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 468999999999998877332 1 2567899999766554333222221100 0001112
Q ss_pred E---EEccCCCCCCCCCcccEEEecccccCcc--------------------------------------cHHHHHHHHH
Q 025144 127 W---VEGDALDLPFSDCFFDAITMGYGLRNVV--------------------------------------DKRKALEESF 165 (257)
Q Consensus 127 ~---~~~d~~~~~~~~~~~D~v~~~~~l~~~~--------------------------------------~~~~~l~~~~ 165 (257)
+ +.+.+-.-.+|++++|+|+++.+|||+. |...+|+..+
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 3333333457899999999999999986 3344688899
Q ss_pred hcccCCCEEEEEeecCCCchhHH-----HHH-HHHHhhhhhhhhccCCchhhhhhhHHHHhccCCHHHHHHHHH-HcCce
Q 025144 166 RVLKPGSRISVLDFNKSTQPFTT-----AIQ-EWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLAL-EIGFS 238 (257)
Q Consensus 166 ~~Lk~gG~l~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gf~ 238 (257)
+.|+|||.+++......+..... ... ..+...+...........+..... .....+.+.++++++++ +.||+
T Consensus 213 ~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f-~~P~y~ps~~E~~~~l~~~~~F~ 291 (374)
T 3b5i_A 213 AEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGF-NIPVYAPSLQDFKEVVDANGSFA 291 (374)
T ss_dssp HHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSC-CCCBCCCCHHHHHHHHHHHCSEE
T ss_pred HHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccC-CccccCCCHHHHHHHHHhcCCcE
Confidence 99999999999887765532110 111 111111100000000000000000 00012469999999998 58999
Q ss_pred eeEEeeec
Q 025144 239 RAKHYELS 246 (257)
Q Consensus 239 ~~~~~~~~ 246 (257)
+.....+.
T Consensus 292 I~~le~~~ 299 (374)
T 3b5i_A 292 IDKLVVYK 299 (374)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 88766553
No 261
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.19 E-value=9.2e-11 Score=92.55 Aligned_cols=90 Identities=19% Similarity=0.116 Sum_probs=73.8
Q ss_pred HHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCC
Q 025144 54 HRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDAL 133 (257)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~ 133 (257)
...+.+.+...+...++ +|||||||+|.++..+++. +.+|+++|+++.|++.+++++.. .+++++++|+.
T Consensus 32 d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~---~~~V~avEid~~~~~~l~~~~~~------~~v~vi~~D~l 101 (271)
T 3fut_A 32 SEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEA---GAEVTAIEKDLRLRPVLEETLSG------LPVRLVFQDAL 101 (271)
T ss_dssp CHHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHT---TCCEEEEESCGGGHHHHHHHTTT------SSEEEEESCGG
T ss_pred CHHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcCC------CCEEEEECChh
Confidence 34556667777788888 9999999999999999987 36899999999999999988752 58999999999
Q ss_pred CCCCCC-CcccEEEecccccC
Q 025144 134 DLPFSD-CFFDAITMGYGLRN 153 (257)
Q Consensus 134 ~~~~~~-~~~D~v~~~~~l~~ 153 (257)
++++++ ..+|.|+++...+-
T Consensus 102 ~~~~~~~~~~~~iv~NlPy~i 122 (271)
T 3fut_A 102 LYPWEEVPQGSLLVANLPYHI 122 (271)
T ss_dssp GSCGGGSCTTEEEEEEECSSC
T ss_pred hCChhhccCccEEEecCcccc
Confidence 877543 26888888765543
No 262
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.18 E-value=9.9e-11 Score=91.70 Aligned_cols=87 Identities=18% Similarity=0.234 Sum_probs=70.6
Q ss_pred HHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCC
Q 025144 55 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD 134 (257)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 134 (257)
..+.+.+...+...++.+|||||||+|.++..+++. ..+|+++|+++.|++.+++++... ++++++++|+.+
T Consensus 15 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~avEid~~~~~~~~~~~~~~-----~~v~~i~~D~~~ 86 (255)
T 3tqs_A 15 SFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTE---CDNLALVEIDRDLVAFLQKKYNQQ-----KNITIYQNDALQ 86 (255)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTT---SSEEEEEECCHHHHHHHHHHHTTC-----TTEEEEESCTTT
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHhhC-----CCcEEEEcchHh
Confidence 345566777778888999999999999999999876 469999999999999999987541 689999999998
Q ss_pred CCCC----CCcccEEEeccc
Q 025144 135 LPFS----DCFFDAITMGYG 150 (257)
Q Consensus 135 ~~~~----~~~~D~v~~~~~ 150 (257)
++++ +++|| |+++..
T Consensus 87 ~~~~~~~~~~~~~-vv~NlP 105 (255)
T 3tqs_A 87 FDFSSVKTDKPLR-VVGNLP 105 (255)
T ss_dssp CCGGGSCCSSCEE-EEEECC
T ss_pred CCHHHhccCCCeE-EEecCC
Confidence 8653 35688 555443
No 263
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=99.12 E-value=2.9e-09 Score=84.24 Aligned_cols=110 Identities=14% Similarity=0.087 Sum_probs=84.4
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhh--hccCCCeeEEEccCCCCC-CCCCcccE
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVS--KACYKNIEWVEGDALDLP-FSDCFFDA 144 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~--~~~~~~~~~~~~d~~~~~-~~~~~~D~ 144 (257)
+...+||-||.|.|..++.+++. .+..+++.+|+++++++.+++.+.... .-..++++++.+|...+- ...++||+
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~-~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDv 160 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRH-KNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTC-TTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHc-CCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCE
Confidence 44569999999999999999987 355799999999999999998875321 112378999999998753 44678999
Q ss_pred EEecccccCcc----cHHHHHHHHHhcccCCCEEEEEe
Q 025144 145 ITMGYGLRNVV----DKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 145 v~~~~~l~~~~----~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
|++...-..-+ --..+++.+++.|+|||+++...
T Consensus 161 Ii~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 161 IISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEec
Confidence 99754311111 12578999999999999998754
No 264
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.11 E-value=1.9e-09 Score=96.08 Aligned_cols=123 Identities=16% Similarity=0.130 Sum_probs=90.1
Q ss_pred HHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHh-----------------------------------------C
Q 025144 54 HRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQV-----------------------------------------G 92 (257)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-----------------------------------------~ 92 (257)
.+.+...++......++.+|||.+||+|.+++..+... .
T Consensus 175 ~e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~ 254 (703)
T 3v97_A 175 KETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAE 254 (703)
T ss_dssp CHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhcccc
Confidence 34556667777777788899999999999998877642 0
Q ss_pred CCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCC--CCcccEEEecccccCc----ccHHHHHHHH--
Q 025144 93 SQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFS--DCFFDAITMGYGLRNV----VDKRKALEES-- 164 (257)
Q Consensus 93 ~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~D~v~~~~~l~~~----~~~~~~l~~~-- 164 (257)
+...++|+|+++.+++.|+.++...+.. ..+.+.++|+.++..+ .++||+|+++..+..- .+...+.+.+
T Consensus 255 ~~~~i~G~Did~~av~~A~~N~~~agv~--~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~ 332 (703)
T 3v97_A 255 YSSHFYGSDSDARVIQRARTNARLAGIG--ELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGR 332 (703)
T ss_dssp CCCCEEEEESCHHHHHHHHHHHHHTTCG--GGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHH
T ss_pred CCccEEEEECCHHHHHHHHHHHHHcCCC--CceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHH
Confidence 1257999999999999999998776543 4689999999886432 3489999998765432 2334444444
Q ss_pred -HhcccCCCEEEEEe
Q 025144 165 -FRVLKPGSRISVLD 178 (257)
Q Consensus 165 -~~~Lk~gG~l~~~~ 178 (257)
.+.+.|||.+++..
T Consensus 333 ~lk~~~~g~~~~ilt 347 (703)
T 3v97_A 333 IMKNQFGGWNLSLFS 347 (703)
T ss_dssp HHHHHCTTCEEEEEE
T ss_pred HHHhhCCCCeEEEEe
Confidence 44455899988875
No 265
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=99.11 E-value=3.9e-10 Score=92.00 Aligned_cols=114 Identities=14% Similarity=0.191 Sum_probs=81.0
Q ss_pred CCCeEEEecCCCChhHHHHHHH---------------hCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCC
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQ---------------VGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDAL 133 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~---------------~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~ 133 (257)
..-+|+|+||++|..+..+... -.|..+|...|+.......+-+.+...... .+..++.+...
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~--~~~~f~~gvpg 128 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDV--DGVCFINGVPG 128 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSC--TTCEEEEEEES
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhccc--CCCEEEEecch
Confidence 3458999999999877644332 135678999999888887777666432110 12344444443
Q ss_pred C---CCCCCCcccEEEecccccCcccH---------------------------------HHHHHHHHhcccCCCEEEEE
Q 025144 134 D---LPFSDCFFDAITMGYGLRNVVDK---------------------------------RKALEESFRVLKPGSRISVL 177 (257)
Q Consensus 134 ~---~~~~~~~~D~v~~~~~l~~~~~~---------------------------------~~~l~~~~~~Lk~gG~l~~~ 177 (257)
+ -.+|++++|+|+++.++||+.+. ..+|+..++.|+|||.+++.
T Consensus 129 SFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~ 208 (359)
T 1m6e_X 129 SFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLT 208 (359)
T ss_dssp CSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEE
T ss_pred hhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 3 45889999999999999998542 23488889999999999988
Q ss_pred eecCCCc
Q 025144 178 DFNKSTQ 184 (257)
Q Consensus 178 ~~~~~~~ 184 (257)
.....+.
T Consensus 209 ~~gr~~~ 215 (359)
T 1m6e_X 209 ILGRRSE 215 (359)
T ss_dssp EEECSSS
T ss_pred EecCCCC
Confidence 7766553
No 266
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.09 E-value=1.8e-10 Score=92.22 Aligned_cols=88 Identities=19% Similarity=0.268 Sum_probs=71.7
Q ss_pred HHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-
Q 025144 58 KRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP- 136 (257)
Q Consensus 58 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~- 136 (257)
.+.+...+...++.+|||+|||+|..+..+++.+ ++.+++++|.|+.+++.|+++++..+ .++.++++|+.+++
T Consensus 15 l~e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~-~~~~VigvD~d~~al~~A~~~~~~~g----~~v~~v~~d~~~l~~ 89 (301)
T 1m6y_A 15 VREVIEFLKPEDEKIILDCTVGEGGHSRAILEHC-PGCRIIGIDVDSEVLRIAEEKLKEFS----DRVSLFKVSYREADF 89 (301)
T ss_dssp HHHHHHHHCCCTTCEEEETTCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTGGGT----TTEEEEECCGGGHHH
T ss_pred HHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhcC----CcEEEEECCHHHHHH
Confidence 3445566677788899999999999999999985 46799999999999999999886543 58999999998764
Q ss_pred -CC---CCcccEEEeccc
Q 025144 137 -FS---DCFFDAITMGYG 150 (257)
Q Consensus 137 -~~---~~~~D~v~~~~~ 150 (257)
+. .++||.|++...
T Consensus 90 ~l~~~g~~~~D~Vl~D~g 107 (301)
T 1m6y_A 90 LLKTLGIEKVDGILMDLG 107 (301)
T ss_dssp HHHHTTCSCEEEEEEECS
T ss_pred HHHhcCCCCCCEEEEcCc
Confidence 11 157999998654
No 267
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.07 E-value=5.4e-10 Score=96.77 Aligned_cols=126 Identities=14% Similarity=0.087 Sum_probs=92.0
Q ss_pred HHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCC-----------------CceEEEEeCChhHHHHHHhhhhhh
Q 025144 55 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGS-----------------QGKVIGLDFSKNQLSMASSRQDLV 117 (257)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~-----------------~~~v~~~D~s~~~~~~a~~~~~~~ 117 (257)
....+.+...+...++.+|+|.|||+|.++..+.+.+.. ...++|+|+++.++..|+.++...
T Consensus 155 ~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~ 234 (541)
T 2ar0_A 155 RPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLH 234 (541)
T ss_dssp HHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHh
Confidence 334556667777777889999999999999888776421 137999999999999999876543
Q ss_pred hhcc--CCCeeEEEccCCCCC-CCCCcccEEEecccccCccc--------------HHHHHHHHHhcccCCCEEEEEeec
Q 025144 118 SKAC--YKNIEWVEGDALDLP-FSDCFFDAITMGYGLRNVVD--------------KRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 118 ~~~~--~~~~~~~~~d~~~~~-~~~~~~D~v~~~~~l~~~~~--------------~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
+... ..+..+.++|....+ ...++||+|+++..+..... ...++.++.+.|+|||++.++.++
T Consensus 235 gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~ 314 (541)
T 2ar0_A 235 DIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPD 314 (541)
T ss_dssp TCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred CCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecC
Confidence 3210 012788999986643 33468999999877654322 246899999999999998887643
No 268
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.06 E-value=4.8e-10 Score=92.87 Aligned_cols=113 Identities=15% Similarity=0.225 Sum_probs=81.2
Q ss_pred HHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCC
Q 025144 55 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD 134 (257)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 134 (257)
+.+...+...+... +.+|||+|||+|.++..+++. ..+|+++|+|+.+++.|+++.+..+. .++.++.+|+.+
T Consensus 200 ~~l~~~~~~~~~~~-~~~vLDl~cG~G~~~l~la~~---~~~V~gvd~~~~ai~~a~~n~~~ng~---~~v~~~~~d~~~ 272 (369)
T 3bt7_A 200 IQMLEWALDVTKGS-KGDLLELYCGNGNFSLALARN---FDRVLATEIAKPSVAAAQYNIAANHI---DNVQIIRMAAEE 272 (369)
T ss_dssp HHHHHHHHHHTTTC-CSEEEEESCTTSHHHHHHGGG---SSEEEEECCCHHHHHHHHHHHHHTTC---CSEEEECCCSHH
T ss_pred HHHHHHHHHHhhcC-CCEEEEccCCCCHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCC---CceEEEECCHHH
Confidence 34445555555444 468999999999999998865 35899999999999999998865442 489999999876
Q ss_pred CC--CCC--------------CcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeec
Q 025144 135 LP--FSD--------------CFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 135 ~~--~~~--------------~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
.. ... ++||+|++...-.. +...+.+.|+++|.++.+..+
T Consensus 273 ~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g------~~~~~~~~l~~~g~ivyvsc~ 328 (369)
T 3bt7_A 273 FTQAMNGVREFNRLQGIDLKSYQCETIFVDPPRSG------LDSETEKMVQAYPRILYISCN 328 (369)
T ss_dssp HHHHHSSCCCCTTGGGSCGGGCCEEEEEECCCTTC------CCHHHHHHHTTSSEEEEEESC
T ss_pred HHHHHhhccccccccccccccCCCCEEEECcCccc------cHHHHHHHHhCCCEEEEEECC
Confidence 41 111 37999998543221 234556666788988777654
No 269
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=99.02 E-value=3.2e-09 Score=92.57 Aligned_cols=103 Identities=12% Similarity=0.036 Sum_probs=74.4
Q ss_pred CCCeEEEecCCCChhHH---HHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEE
Q 025144 69 TGDNVLDVCCGSGDLSF---LLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAI 145 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~---~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v 145 (257)
....|||+|||+|-+.. ..++..+...+|+++|.|+ +...+++..+..+.. .+|+++++|++++..| +++|+|
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~--dkVtVI~gd~eev~LP-EKVDII 432 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWG--SQVTVVSSDMREWVAP-EKADII 432 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTG--GGEEEEESCTTTCCCS-SCEEEE
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCC--CeEEEEeCcceeccCC-cccCEE
Confidence 34579999999998844 3333322233799999987 666777777665554 6899999999998776 789999
Q ss_pred Eeccc--ccCcccHHHHHHHHHhcccCCCEEE
Q 025144 146 TMGYG--LRNVVDKRKALEESFRVLKPGSRIS 175 (257)
Q Consensus 146 ~~~~~--l~~~~~~~~~l~~~~~~Lk~gG~l~ 175 (257)
++-.+ +-..+.....+....+.|||||.++
T Consensus 433 VSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 433 VSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp ECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred EEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 97322 1111334567888889999999874
No 270
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.01 E-value=5.1e-10 Score=92.62 Aligned_cols=102 Identities=19% Similarity=0.167 Sum_probs=80.6
Q ss_pred CCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhh---------------hhccCCCeeEEEccCC
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLV---------------SKACYKNIEWVEGDAL 133 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~---------------~~~~~~~~~~~~~d~~ 133 (257)
++.+|||+|||+|..+..++... +..+|+++|+++.+++.++++++.. +. .++.++++|+.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~-~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl---~~i~v~~~Da~ 122 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALET-PAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGE---KTIVINHDDAN 122 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHS-SCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESS---SEEEEEESCHH
T ss_pred CCCEEEECCCchhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCC---CceEEEcCcHH
Confidence 57799999999999999999885 4468999999999999999998765 32 34899999987
Q ss_pred CCCC-CCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEe
Q 025144 134 DLPF-SDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 134 ~~~~-~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
++.. ..+.||+|++.. .. ....++..+.+.|++||.+++..
T Consensus 123 ~~~~~~~~~fD~I~lDP-~~---~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 123 RLMAERHRYFHFIDLDP-FG---SPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHHHHSTTCEEEEEECC-SS---CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHhccCCCCEEEeCC-CC---CHHHHHHHHHHhcCCCCEEEEEe
Confidence 6421 135799999643 22 34678889999999999876654
No 271
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=99.01 E-value=2.6e-09 Score=83.40 Aligned_cols=75 Identities=19% Similarity=0.302 Sum_probs=62.6
Q ss_pred HHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCC
Q 025144 55 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD 134 (257)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 134 (257)
..+.+.+...+...++.+|||||||+|.++..+++. +..+++++|+|+.+++.++++ . . .+++++++|+.+
T Consensus 17 ~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~--~~~~v~avEid~~~~~~~~~~-~--~----~~v~~i~~D~~~ 87 (249)
T 3ftd_A 17 EGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQH--PLKKLYVIELDREMVENLKSI-G--D----ERLEVINEDASK 87 (249)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTS--CCSEEEEECCCHHHHHHHTTS-C--C----TTEEEECSCTTT
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHc--CCCeEEEEECCHHHHHHHHhc-c--C----CCeEEEEcchhh
Confidence 445566777777788899999999999999999876 247999999999999999887 2 1 589999999998
Q ss_pred CCCC
Q 025144 135 LPFS 138 (257)
Q Consensus 135 ~~~~ 138 (257)
++++
T Consensus 88 ~~~~ 91 (249)
T 3ftd_A 88 FPFC 91 (249)
T ss_dssp CCGG
T ss_pred CChh
Confidence 8754
No 272
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=99.01 E-value=1.5e-09 Score=85.00 Aligned_cols=109 Identities=17% Similarity=0.123 Sum_probs=72.0
Q ss_pred CCCCeEEEecCCCChhHHHHHHHh------CCC-----ceEEEEeCCh---hHHH-----------HHHhhhhhhh----
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQV------GSQ-----GKVIGLDFSK---NQLS-----------MASSRQDLVS---- 118 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~------~~~-----~~v~~~D~s~---~~~~-----------~a~~~~~~~~---- 118 (257)
.+..+|||+|+|+|..+..+++.. .|. .+++++|..+ +.+. .+++.++..+
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 455699999999999998877653 453 5899999876 4444 3343333210
Q ss_pred -------hccCCCeeEEEccCCC-CC-CCC---CcccEEEecc-cccCccc--HHHHHHHHHhcccCCCEEEE
Q 025144 119 -------KACYKNIEWVEGDALD-LP-FSD---CFFDAITMGY-GLRNVVD--KRKALEESFRVLKPGSRISV 176 (257)
Q Consensus 119 -------~~~~~~~~~~~~d~~~-~~-~~~---~~~D~v~~~~-~l~~~~~--~~~~l~~~~~~Lk~gG~l~~ 176 (257)
.....+++++.+|+.+ ++ .++ ..||+|+... .-..-++ -..++..+.++|+|||.++.
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 0111367789999876 33 222 2799999853 2221223 36789999999999999863
No 273
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.00 E-value=5.2e-10 Score=92.66 Aligned_cols=104 Identities=16% Similarity=0.046 Sum_probs=81.6
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCC-ceEEEEeCChhHHHHHHhhhhhhhhccCCC-eeEEEccCCCCC--CCCCccc
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQ-GKVIGLDFSKNQLSMASSRQDLVSKACYKN-IEWVEGDALDLP--FSDCFFD 143 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~-~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~-~~~~~~d~~~~~--~~~~~~D 143 (257)
.++.+|||++||+|.++..++... .+ .+|+++|+++.+++.++++++..+.. .+ +.++++|+.++. ...+.||
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~-~ga~~V~avDi~~~av~~~~~N~~~Ngl~--~~~v~v~~~Da~~~l~~~~~~~fD 127 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLET-SCVEKAYANDISSKAIEIMKENFKLNNIP--EDRYEIHGMEANFFLRKEWGFGFD 127 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHC-SCEEEEEEECSCHHHHHHHHHHHHHTTCC--GGGEEEECSCHHHHHHSCCSSCEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhC-CCCCEEEEEECCHHHHHHHHHHHHHhCCC--CceEEEEeCCHHHHHHHhhCCCCc
Confidence 457799999999999999999874 33 58999999999999999998765532 23 899999986531 1245799
Q ss_pred EEEecccccCcccHHHHHHHHHhcccCCCEEEEEe
Q 025144 144 AITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 144 ~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
+|++.. ...+..++..+.+.|++||.+++..
T Consensus 128 ~V~lDP----~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 128 YVDLDP----FGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EEEECC----SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECC----CcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 999865 2234568889999999999876655
No 274
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=99.00 E-value=1.9e-09 Score=85.55 Aligned_cols=77 Identities=16% Similarity=0.251 Sum_probs=63.0
Q ss_pred HHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCC-CceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCC
Q 025144 55 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGS-QGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDAL 133 (257)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~ 133 (257)
..+.+.+...+...++.+|||||||+|.++..+++.... ..+|+++|+|+.|++.++++. . .++.++++|+.
T Consensus 28 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~---~----~~v~~i~~D~~ 100 (279)
T 3uzu_A 28 HGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF---G----ELLELHAGDAL 100 (279)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH---G----GGEEEEESCGG
T ss_pred HHHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc---C----CCcEEEECChh
Confidence 345566777778888899999999999999999988422 134999999999999999883 1 68999999999
Q ss_pred CCCCC
Q 025144 134 DLPFS 138 (257)
Q Consensus 134 ~~~~~ 138 (257)
+++++
T Consensus 101 ~~~~~ 105 (279)
T 3uzu_A 101 TFDFG 105 (279)
T ss_dssp GCCGG
T ss_pred cCChh
Confidence 87653
No 275
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.99 E-value=2.6e-10 Score=89.55 Aligned_cols=84 Identities=18% Similarity=0.161 Sum_probs=65.3
Q ss_pred hCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCCh-------hHHHHHHhhhhhhhhccCCCeeEEEccCCCC-C
Q 025144 65 SGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSK-------NQLSMASSRQDLVSKACYKNIEWVEGDALDL-P 136 (257)
Q Consensus 65 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~-------~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-~ 136 (257)
+...++.+|||+|||+|..+..+++. +.+|+++|+|+ .+++.++++.+..+.. .+++++++|..++ +
T Consensus 79 ~~~~~~~~VLDlgcG~G~~a~~lA~~---g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~--~ri~~~~~d~~~~l~ 153 (258)
T 2r6z_A 79 VNHTAHPTVWDATAGLGRDSFVLASL---GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTA--ARINLHFGNAAEQMP 153 (258)
T ss_dssp TTGGGCCCEEETTCTTCHHHHHHHHT---TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHH--TTEEEEESCHHHHHH
T ss_pred hCcCCcCeEEEeeCccCHHHHHHHHh---CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCc--cCeEEEECCHHHHHH
Confidence 34456789999999999999999986 46899999999 9999998876544432 3599999999874 2
Q ss_pred -CCC--CcccEEEecccccC
Q 025144 137 -FSD--CFFDAITMGYGLRN 153 (257)
Q Consensus 137 -~~~--~~~D~v~~~~~l~~ 153 (257)
+++ ++||+|++..++.+
T Consensus 154 ~~~~~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 154 ALVKTQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHHHHHCCCSEEEECCCC--
T ss_pred hhhccCCCccEEEECCCCCC
Confidence 333 68999999876654
No 276
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.94 E-value=1.7e-09 Score=84.59 Aligned_cols=89 Identities=10% Similarity=0.076 Sum_probs=66.1
Q ss_pred HHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCC
Q 025144 55 RIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD 134 (257)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 134 (257)
..+.+.+...+...++.+|||||||+|.++. +. . ....+|+++|+++.|++.+++++... ++++++++|+.+
T Consensus 7 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~-~-~~~~~v~avEid~~~~~~a~~~~~~~-----~~v~~i~~D~~~ 78 (252)
T 1qyr_A 7 QFVIDSIVSAINPQKGQAMVEIGPGLAALTE-PV-G-ERLDQLTVIELDRDLAARLQTHPFLG-----PKLTIYQQDAMT 78 (252)
T ss_dssp HHHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HH-H-TTCSCEEEECCCHHHHHHHHTCTTTG-----GGEEEECSCGGG
T ss_pred HHHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hh-h-CCCCeEEEEECCHHHHHHHHHHhccC-----CceEEEECchhh
Confidence 3455566677777888899999999999999 64 4 22223999999999999999887542 489999999998
Q ss_pred CCCCC-----CcccEEEecccc
Q 025144 135 LPFSD-----CFFDAITMGYGL 151 (257)
Q Consensus 135 ~~~~~-----~~~D~v~~~~~l 151 (257)
+++++ +..|.|+++...
T Consensus 79 ~~~~~~~~~~~~~~~vvsNlPY 100 (252)
T 1qyr_A 79 FNFGELAEKMGQPLRVFGNLPY 100 (252)
T ss_dssp CCHHHHHHHHTSCEEEEEECCT
T ss_pred CCHHHhhcccCCceEEEECCCC
Confidence 76432 123566665543
No 277
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.94 E-value=4.4e-09 Score=90.99 Aligned_cols=150 Identities=13% Similarity=0.051 Sum_probs=99.6
Q ss_pred chhHHHHhhhhhhhhhhhhhhh--hhhhHHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhC-------------
Q 025144 28 SSERQELFSRIAPVYDNLNDLL--SFGQHRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVG------------- 92 (257)
Q Consensus 28 ~~~~~~~y~~~a~~y~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~------------- 92 (257)
.+.+.+.|+.+...|....... .+--.....+.+...+...++ +|+|.+||+|.+...+.+.+.
T Consensus 202 ~D~lG~~yE~ll~~~a~~~~k~~G~fyTP~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~ 280 (544)
T 3khk_A 202 KDILGHVYEYFLGQFALAEGKQGGQYYTPKSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQ 280 (544)
T ss_dssp CCSHHHHHHHHHHHHHHTTTCCSTTTCCCHHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHH
T ss_pred hhHHHHHHHHHHHHHHHhhCccCCeEeCCHHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHH
Confidence 4556667776555543321111 111234455666666666555 999999999999887765431
Q ss_pred -CCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-CCCCcccEEEecccccCc----------------
Q 025144 93 -SQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-FSDCFFDAITMGYGLRNV---------------- 154 (257)
Q Consensus 93 -~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~v~~~~~l~~~---------------- 154 (257)
....++|+|+++.++..|+.++...+.. .++.+.++|....+ ++..+||+|+++..+..-
T Consensus 281 ~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~--~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g 358 (544)
T 3khk_A 281 KKQISVYGQESNPTTWKLAAMNMVIRGID--FNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTIN 358 (544)
T ss_dssp GGGEEEEECCCCHHHHHHHHHHHHHTTCC--CBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEEC
T ss_pred hhhceEEEEeCCHHHHHHHHHHHHHhCCC--cccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcC
Confidence 0358999999999999999887544322 23444778866543 456789999998766531
Q ss_pred ---------c----cHHHHHHHHHhcccCCCEEEEEeec
Q 025144 155 ---------V----DKRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 155 ---------~----~~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
+ .-..++.++.+.|+|||++.++.++
T Consensus 359 ~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~ 397 (544)
T 3khk_A 359 TNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLAN 397 (544)
T ss_dssp CC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEET
T ss_pred cccccccccCCCcchhHHHHHHHHHHhccCceEEEEecc
Confidence 1 0125799999999999998877643
No 278
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.89 E-value=2.5e-09 Score=83.61 Aligned_cols=106 Identities=13% Similarity=0.117 Sum_probs=70.8
Q ss_pred HHhhhCCCCC--CeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhh----c--cCCCeeEEEccC
Q 025144 61 AVSWSGAKTG--DNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSK----A--CYKNIEWVEGDA 132 (257)
Q Consensus 61 ~~~~~~~~~~--~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~----~--~~~~~~~~~~d~ 132 (257)
+...+...++ .+|||++||+|..+..++.. +.+|+++|.++.+.+.+++.++.... . ...+++++++|.
T Consensus 78 l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~---g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~ 154 (258)
T 2oyr_A 78 VAKAVGIKGDYLPDVVDATAGLGRDAFVLASV---GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASS 154 (258)
T ss_dssp HHHHTTCBTTBCCCEEETTCTTCHHHHHHHHH---TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCH
T ss_pred HHHHhcccCCCCCEEEEcCCcCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCH
Confidence 4445556666 89999999999999999987 45899999999887776665543210 0 004799999998
Q ss_pred CCC-CCCCCcccEEEecccccCcccHHHHHHHHHhcccC
Q 025144 133 LDL-PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKP 170 (257)
Q Consensus 133 ~~~-~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~ 170 (257)
.++ +...++||+|++..++.+-. ....+++..+.|++
T Consensus 155 ~~~L~~~~~~fDvV~lDP~y~~~~-~saavkk~~~~lr~ 192 (258)
T 2oyr_A 155 LTALTDITPRPQVVYLDPMFPHKQ-KSALVKKEMRVFQS 192 (258)
T ss_dssp HHHSTTCSSCCSEEEECCCCCCCC-C-----HHHHHHHH
T ss_pred HHHHHhCcccCCEEEEcCCCCCcc-cchHHHHHHHHHHH
Confidence 763 32224699999988776543 22344444455544
No 279
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.86 E-value=3.7e-08 Score=85.06 Aligned_cols=124 Identities=18% Similarity=0.143 Sum_probs=89.3
Q ss_pred HHHHHHHhhhC----CCCCCeEEEecCCCChhHHHHHHHhC--CCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEE
Q 025144 56 IWKRMAVSWSG----AKTGDNVLDVCCGSGDLSFLLSEQVG--SQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVE 129 (257)
Q Consensus 56 ~~~~~~~~~~~----~~~~~~vLdiG~G~G~~~~~l~~~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~ 129 (257)
...+.+...+. ..++.+|+|.+||+|.+...+.+.+. ....++|+|+++.++..|+.++...+.. ..++.+.+
T Consensus 204 ~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~-~~~~~I~~ 282 (542)
T 3lkd_A 204 PVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVP-IENQFLHN 282 (542)
T ss_dssp HHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCC-GGGEEEEE
T ss_pred HHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCC-cCccceEe
Confidence 34445555443 44677999999999999988887752 2468999999999999999876443321 13678999
Q ss_pred ccCCCC--C-CCCCcccEEEecccccCc--------cc---------------HHHHHHHHHhccc-CCCEEEEEeec
Q 025144 130 GDALDL--P-FSDCFFDAITMGYGLRNV--------VD---------------KRKALEESFRVLK-PGSRISVLDFN 180 (257)
Q Consensus 130 ~d~~~~--~-~~~~~~D~v~~~~~l~~~--------~~---------------~~~~l~~~~~~Lk-~gG~l~~~~~~ 180 (257)
+|.... + ....+||+|+++..+..- .+ --.++.++.+.|+ +||++.++.++
T Consensus 283 gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~ 360 (542)
T 3lkd_A 283 ADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPH 360 (542)
T ss_dssp SCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEET
T ss_pred cceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecc
Confidence 998765 3 346789999997554311 00 1247899999999 99998877644
No 280
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.86 E-value=3.3e-08 Score=74.10 Aligned_cols=101 Identities=11% Similarity=0.017 Sum_probs=74.9
Q ss_pred CCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC-------------
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL------------- 135 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~------------- 135 (257)
+..+|||+|| |..+..+++. ++.+|+.+|.+++..+.++++++..+.....++.++.+|+.+.
T Consensus 30 ~a~~VLEiGt--GySTl~lA~~--~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~ 105 (202)
T 3cvo_A 30 EAEVILEYGS--GGSTVVAAEL--PGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWR 105 (202)
T ss_dssp HCSEEEEESC--SHHHHHHHTS--TTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGG
T ss_pred CCCEEEEECc--hHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhh
Confidence 4569999998 5677777763 3679999999999999999998765530015899999996542
Q ss_pred --C--------C-CCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEe
Q 025144 136 --P--------F-SDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 136 --~--------~-~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
+ . ..++||+|++..-. ....+..+.+.|+|||.+++-+
T Consensus 106 ~l~~~~~~i~~~~~~~~fDlIfIDg~k-----~~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 106 SYPDYPLAVWRTEGFRHPDVVLVDGRF-----RVGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp GTTHHHHGGGGCTTCCCCSEEEECSSS-----HHHHHHHHHHHCSSCEEEEETT
T ss_pred hHHHHhhhhhccccCCCCCEEEEeCCC-----chhHHHHHHHhcCCCeEEEEeC
Confidence 1 1 13689999987632 2466666779999999996644
No 281
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.85 E-value=1.2e-08 Score=79.21 Aligned_cols=110 Identities=15% Similarity=0.165 Sum_probs=73.4
Q ss_pred hCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccE
Q 025144 65 SGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDA 144 (257)
Q Consensus 65 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 144 (257)
..+.++.+|||+|||+|.++..+++.. +...+.++|++..+....... ...+ .++..+..++....++++++|+
T Consensus 70 ~~l~~~~~VLDLGaAPGGWSQvAa~~~-~~~~v~g~dVGvDl~~~pi~~-~~~g----~~ii~~~~~~dv~~l~~~~~Dl 143 (277)
T 3evf_A 70 GYVKLEGRVIDLGCGRGGWCYYAAAQK-EVSGVKGFTLGRDGHEKPMNV-QSLG----WNIITFKDKTDIHRLEPVKCDT 143 (277)
T ss_dssp TSSCCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTCCCCCCC-CBTT----GGGEEEECSCCTTTSCCCCCSE
T ss_pred CCCCCCCEEEEecCCCCHHHHHHHHhc-CCCcceeEEEeccCccccccc-CcCC----CCeEEEeccceehhcCCCCccE
Confidence 445677899999999999999888762 344788999875531110000 0000 2556667766555566788999
Q ss_pred EEeccccc----CcccH--HHHHHHHHhcccCC-CEEEEEeec
Q 025144 145 ITMGYGLR----NVVDK--RKALEESFRVLKPG-SRISVLDFN 180 (257)
Q Consensus 145 v~~~~~l~----~~~~~--~~~l~~~~~~Lk~g-G~l~~~~~~ 180 (257)
|++..+.+ ..+.. ..+|+.+.++|+|| |.+++-.+.
T Consensus 144 VlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 144 LLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp EEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred EEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 99977665 12221 23478889999999 999885554
No 282
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.83 E-value=2.3e-09 Score=88.96 Aligned_cols=75 Identities=20% Similarity=0.237 Sum_probs=62.0
Q ss_pred CCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhh--hhccCCCeeEEEccCCCC-CC-CCCcccE
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLV--SKACYKNIEWVEGDALDL-PF-SDCFFDA 144 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~--~~~~~~~~~~~~~d~~~~-~~-~~~~~D~ 144 (257)
++.+|||+|||+|..+..+++. +.+|+++|+|+.+++.++++++.. +. .++.++++|+.+. +. ++++||+
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~---g~~V~~VD~s~~~l~~Ar~N~~~~~~gl---~~i~~i~~Da~~~L~~~~~~~fDv 166 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK---ASQGIYIERNDETAVAARHNIPLLLNEG---KDVNILTGDFKEYLPLIKTFHPDY 166 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT---CSEEEEEESCHHHHHHHHHHHHHHSCTT---CEEEEEESCGGGSHHHHHHHCCSE
T ss_pred CCCEEEEeCCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHhHHHhccCC---CcEEEEECcHHHhhhhccCCCceE
Confidence 4789999999999999988865 469999999999999999998754 32 4799999999874 21 2357999
Q ss_pred EEecc
Q 025144 145 ITMGY 149 (257)
Q Consensus 145 v~~~~ 149 (257)
|++..
T Consensus 167 V~lDP 171 (410)
T 3ll7_A 167 IYVDP 171 (410)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 99853
No 283
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.75 E-value=6.2e-08 Score=84.61 Aligned_cols=102 Identities=14% Similarity=0.021 Sum_probs=71.5
Q ss_pred CCeEEEecCCCChhHHHHHHH---hC---------CCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCC
Q 025144 70 GDNVLDVCCGSGDLSFLLSEQ---VG---------SQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF 137 (257)
Q Consensus 70 ~~~vLdiG~G~G~~~~~l~~~---~~---------~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~ 137 (257)
+..|||+|||+|-++...++. .+ ...+|+++|.|+.+...++.+.. .+.. .+++++.+|++++..
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~--d~VtVI~gd~eev~l 486 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWK--RRVTIIESDMRSLPG 486 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTT--TCSEEEESCGGGHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCC--CeEEEEeCchhhccc
Confidence 458999999999996433222 11 13499999999876655555443 2222 579999999999865
Q ss_pred C-----CCcccEEEecccccCc---ccHHHHHHHHHhcccCCCEEE
Q 025144 138 S-----DCFFDAITMGYGLRNV---VDKRKALEESFRVLKPGSRIS 175 (257)
Q Consensus 138 ~-----~~~~D~v~~~~~l~~~---~~~~~~l~~~~~~Lk~gG~l~ 175 (257)
+ .+++|+|++-.. ..+ +-....|..+.+.|||||.++
T Consensus 487 p~~~~~~ekVDIIVSElm-Gsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 487 IAKDRGFEQPDIIVSELL-GSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHHHTTCCCCSEEEECCC-BTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccccCCCCcccEEEEecc-ccccchhccHHHHHHHHHhCCCCcEEE
Confidence 3 578999997443 222 223567888889999999874
No 284
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.75 E-value=6.8e-08 Score=79.03 Aligned_cols=130 Identities=15% Similarity=0.144 Sum_probs=95.1
Q ss_pred HHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhc---cCCCeeEEEccCCCC
Q 025144 59 RMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKA---CYKNIEWVEGDALDL 135 (257)
Q Consensus 59 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~---~~~~~~~~~~d~~~~ 135 (257)
......+...++.+|||+++|.|.-+.++++.. +...++++|+++.-+...+++++..+.. ...++.+...|...+
T Consensus 138 ~l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~-~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~ 216 (359)
T 4fzv_A 138 LLPVLALGLQPGDIVLDLCAAPGGKTLALLQTG-CCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKW 216 (359)
T ss_dssp HHHHHHHCCCTTEEEEESSCTTCHHHHHHHHTT-CEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGH
T ss_pred HHHHHHhCCCCCCEEEEecCCccHHHHHHHHhc-CCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhc
Confidence 445556788899999999999999999999874 5568999999999999998887655321 114788888888765
Q ss_pred C-CCCCcccEEEecccccC--------ccc----------------HHHHHHHHHhcccCCCEEEEEeecCCCchhHHH
Q 025144 136 P-FSDCFFDAITMGYGLRN--------VVD----------------KRKALEESFRVLKPGSRISVLDFNKSTQPFTTA 189 (257)
Q Consensus 136 ~-~~~~~~D~v~~~~~l~~--------~~~----------------~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~ 189 (257)
+ ...+.||.|++...... -++ ..++|.+..+.|||||.|+..+.+.........
T Consensus 217 ~~~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ENE~v 295 (359)
T 4fzv_A 217 GELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYV 295 (359)
T ss_dssp HHHSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTTTTHHH
T ss_pred chhccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchhhCHHH
Confidence 3 34578999996433211 111 145788899999999999888877544444333
No 285
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.63 E-value=1.7e-07 Score=74.10 Aligned_cols=120 Identities=13% Similarity=0.101 Sum_probs=84.5
Q ss_pred HHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhC----CCceEEEEeCChh--------------------------H
Q 025144 57 WKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVG----SQGKVIGLDFSKN--------------------------Q 106 (257)
Q Consensus 57 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~----~~~~v~~~D~s~~--------------------------~ 106 (257)
+...+..........+|||+|+..|..+..+++.+. ++.+++++|.... .
T Consensus 94 L~~l~~~v~~~~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~ 173 (282)
T 2wk1_A 94 IRQCVEDVIGNNVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVS 173 (282)
T ss_dssp HHHHHHHHHHTTCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCC
T ss_pred HHHHHHHHHhcCCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhH
Confidence 333333344344556999999999999988876542 3678999996421 3
Q ss_pred HHHHHhhhhhhhhccCCCeeEEEccCCC-CC-CCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 107 LSMASSRQDLVSKACYKNIEWVEGDALD-LP-FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 107 ~~~a~~~~~~~~~~~~~~~~~~~~d~~~-~~-~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
++.++++++..+.. .+++.++.+|+.+ ++ .++++||+|++.... .......|+.+...|+|||++++-+.
T Consensus 174 ~~~ar~n~~~~gl~-~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~--y~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 174 EEEVRRNFRNYDLL-DEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL--YESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp HHHHHHHHHHTTCC-STTEEEEESCHHHHSTTCCCCCEEEEEECCCS--HHHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred HHHHHHHHHHcCCC-cCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc--cccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 56677777655421 1589999999975 33 445789999987642 23346789999999999999987664
No 286
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.62 E-value=4.6e-07 Score=80.43 Aligned_cols=113 Identities=16% Similarity=0.095 Sum_probs=77.5
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhC--CCceEEEEeCChhHHHHH--Hhhhhhhhh-ccCCCeeEEEccCCCCC-CCCCc
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVG--SQGKVIGLDFSKNQLSMA--SSRQDLVSK-ACYKNIEWVEGDALDLP-FSDCF 141 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~--~~~~v~~~D~s~~~~~~a--~~~~~~~~~-~~~~~~~~~~~d~~~~~-~~~~~ 141 (257)
.++.+|||.|||+|.++..+++.++ ...+++|+|+++.+++.| +.++..... .......+...|..... ...++
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~k 399 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFAN 399 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTT
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCC
Confidence 4577999999999999999988752 135899999999999999 433321000 01123456666665532 23468
Q ss_pred ccEEEecccccC-ccc----------------------------HHHHHHHHHhcccCCCEEEEEeec
Q 025144 142 FDAITMGYGLRN-VVD----------------------------KRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 142 ~D~v~~~~~l~~-~~~----------------------------~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
||+|+++..+.. ... ...++.++.+.|++||.+.++.++
T Consensus 400 FDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 400 VSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPK 467 (878)
T ss_dssp EEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEET
T ss_pred CCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEECh
Confidence 999999877632 110 233678899999999999887654
No 287
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.60 E-value=2.6e-08 Score=77.49 Aligned_cols=109 Identities=16% Similarity=0.163 Sum_probs=71.4
Q ss_pred CCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEE
Q 025144 66 GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAI 145 (257)
Q Consensus 66 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v 145 (257)
.+.++.+|||||||+|.++..+++.. +...+.++|++..+...+... ...+ .++.....+.....++.+++|+|
T Consensus 87 ~Lk~~~~VLDLGaAPGGWsQvAa~~~-gv~sV~GvdvG~d~~~~pi~~-~~~g----~~ii~~~~~~dv~~l~~~~~DvV 160 (282)
T 3gcz_A 87 YVKPTGIVVDLGCGRGGWSYYAASLK-NVKKVMAFTLGVQGHEKPIMR-TTLG----WNLIRFKDKTDVFNMEVIPGDTL 160 (282)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTSCCCCCC-CBTT----GGGEEEECSCCGGGSCCCCCSEE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHhc-CCCeeeeEEeccCcccccccc-ccCC----CceEEeeCCcchhhcCCCCcCEE
Confidence 56778899999999999999988663 445789999987642222110 0001 24444444333333456889999
Q ss_pred Eeccccc----Cccc--HHHHHHHHHhcccCC--CEEEEEeec
Q 025144 146 TMGYGLR----NVVD--KRKALEESFRVLKPG--SRISVLDFN 180 (257)
Q Consensus 146 ~~~~~l~----~~~~--~~~~l~~~~~~Lk~g--G~l~~~~~~ 180 (257)
++..... ..+. ...+|.-+.++|+|| |.+++-.+.
T Consensus 161 LSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 161 LCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp EECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred EecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 9977766 1111 123477778899999 999886655
No 288
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.57 E-value=1.7e-06 Score=70.45 Aligned_cols=88 Identities=13% Similarity=0.131 Sum_probs=65.7
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEE
Q 025144 67 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAIT 146 (257)
Q Consensus 67 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 146 (257)
+.++.++||+||.+|.++..++++ +..|+++|+.+ |-...... +++.+++.|......+.+++|+|+
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r---g~~V~aVD~~~-l~~~l~~~---------~~V~~~~~d~~~~~~~~~~~D~vv 275 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR---NMWVYSVDNGP-MAQSLMDT---------GQVTWLREDGFKFRPTRSNISWMV 275 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT---TCEEEEECSSC-CCHHHHTT---------TCEEEECSCTTTCCCCSSCEEEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC---CCEEEEEEhhh-cChhhccC---------CCeEEEeCccccccCCCCCcCEEE
Confidence 467899999999999999999877 57999999864 32222211 689999999998877677899999
Q ss_pred ecccccCcccHHHHHHHHHhcccCC
Q 025144 147 MGYGLRNVVDKRKALEESFRVLKPG 171 (257)
Q Consensus 147 ~~~~l~~~~~~~~~l~~~~~~Lk~g 171 (257)
|..+.. +...+..+.+.+..+
T Consensus 276 sDm~~~----p~~~~~l~~~wl~~~ 296 (375)
T 4auk_A 276 CDMVEK----PAKVAALMAQWLVNG 296 (375)
T ss_dssp ECCSSC----HHHHHHHHHHHHHTT
T ss_pred EcCCCC----hHHhHHHHHHHHhcc
Confidence 966543 455555555555443
No 289
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=98.53 E-value=4e-08 Score=98.30 Aligned_cols=150 Identities=15% Similarity=0.114 Sum_probs=74.9
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCC----CceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC-CCCCCcc
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGS----QGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-PFSDCFF 142 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~----~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~ 142 (257)
.+..+|||||+|+|..+..+.+.++. ..+|+..|+|+...+.++++++.. .+.....|..+. ++...+|
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~------di~~~~~d~~~~~~~~~~~y 1312 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL------HVTQGQWDPANPAPGSLGKA 1312 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH------TEEEECCCSSCCCC-----C
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc------ccccccccccccccCCCCce
Confidence 35679999999999988777766532 238999999999888888887542 233322344332 2234679
Q ss_pred cEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccCCchhhhhhhHHHHhcc
Q 025144 143 DAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREF 222 (257)
Q Consensus 143 D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (257)
|+|++.+++|..++....+.+++++|||||.+++.+..... .......|... .......+
T Consensus 1313 dlvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~~~~~--~~g~~~~~~~~------------------~~r~~~~~ 1372 (2512)
T 2vz8_A 1313 DLLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHTLLAGH--PLGEMVGFLTS------------------PEQGGRHL 1372 (2512)
T ss_dssp CEEEEECC--------------------CCEEEEEEC-------------------------------------------
T ss_pred eEEEEcccccccccHHHHHHHHHHhcCCCcEEEEEeccccc--ccccccccccc------------------ccccCCcc
Confidence 99999999998888999999999999999999887643210 01111111100 00011234
Q ss_pred CCHHHHHHHHHHcCceeeEEe
Q 025144 223 LTGKDLEKLALEIGFSRAKHY 243 (257)
Q Consensus 223 ~~~~~~~~~l~~~Gf~~~~~~ 243 (257)
.+.++|.++|..+||..+...
T Consensus 1373 ~~~~~w~~~l~~~gf~~~~~~ 1393 (2512)
T 2vz8_A 1373 LSQDQWESLFAGASLHLVALK 1393 (2512)
T ss_dssp ---CTTTTSSTTTTEEEEEEE
T ss_pred cCHHHHHHHHHhCCCceeeec
Confidence 577888899999999887654
No 290
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.51 E-value=4.2e-07 Score=71.10 Aligned_cols=86 Identities=22% Similarity=0.284 Sum_probs=69.7
Q ss_pred HHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC
Q 025144 57 WKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP 136 (257)
Q Consensus 57 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~ 136 (257)
+.+.++..+.+.++..++|++||.|..+..+++. +.+|+|+|.++.+++.+++ ++. +++.++++++.++.
T Consensus 10 Ll~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~-L~~------~rv~lv~~~f~~l~ 79 (285)
T 1wg8_A 10 LYQEALDLLAVRPGGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKG-LHL------PGLTVVQGNFRHLK 79 (285)
T ss_dssp THHHHHHHHTCCTTCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHH-TCC------TTEEEEESCGGGHH
T ss_pred HHHHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHh-hcc------CCEEEEECCcchHH
Confidence 4455666677888899999999999999999987 4699999999999999988 643 48999999998863
Q ss_pred -----CCCCcccEEEeccccc
Q 025144 137 -----FSDCFFDAITMGYGLR 152 (257)
Q Consensus 137 -----~~~~~~D~v~~~~~l~ 152 (257)
...+++|.|++...+.
T Consensus 80 ~~L~~~g~~~vDgIL~DLGvS 100 (285)
T 1wg8_A 80 RHLAALGVERVDGILADLGVS 100 (285)
T ss_dssp HHHHHTTCSCEEEEEEECSCC
T ss_pred HHHHHcCCCCcCEEEeCCccc
Confidence 2235799999755443
No 291
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.51 E-value=3.7e-07 Score=74.54 Aligned_cols=107 Identities=15% Similarity=0.099 Sum_probs=78.0
Q ss_pred CCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhh-----ccCCCeeEEEccCCCCC----CCC
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSK-----ACYKNIEWVEGDALDLP----FSD 139 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~-----~~~~~~~~~~~d~~~~~----~~~ 139 (257)
++.+||-||.|.|..++.+++. + ..+++.+|+++++++.+++.+..... ...++++++..|...+- -..
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh-~-~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~ 282 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKL-K-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 282 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT-C-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCeEEEECCCcHHHHHHHHhc-C-CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhcc
Confidence 4579999999999999999976 3 46899999999999999987643211 11146889999986532 124
Q ss_pred CcccEEEecccccCc-cc---------HHHHHHHHHhcccCCCEEEEE
Q 025144 140 CFFDAITMGYGLRNV-VD---------KRKALEESFRVLKPGSRISVL 177 (257)
Q Consensus 140 ~~~D~v~~~~~l~~~-~~---------~~~~l~~~~~~Lk~gG~l~~~ 177 (257)
++||+|+....-... .+ -..+++.+++.|+|||+++..
T Consensus 283 ~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q 330 (381)
T 3c6k_A 283 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 330 (381)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred CceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 679999976432111 11 246788999999999999764
No 292
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.46 E-value=1.5e-06 Score=60.73 Aligned_cols=88 Identities=15% Similarity=0.067 Sum_probs=61.5
Q ss_pred CCCeEEEecCCCC-hhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCC-CcccEEE
Q 025144 69 TGDNVLDVCCGSG-DLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSD-CFFDAIT 146 (257)
Q Consensus 69 ~~~~vLdiG~G~G-~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~D~v~ 146 (257)
++.+|||||||.| ..+..|++. .+.+|+++|+++..++ +++.|+.+..... +.||+|+
T Consensus 35 ~~~rVlEVG~G~g~~vA~~La~~--~g~~V~atDInp~Av~------------------~v~dDiF~P~~~~Y~~~DLIY 94 (153)
T 2k4m_A 35 PGTRVVEVGAGRFLYVSDYIRKH--SKVDLVLTDIKPSHGG------------------IVRDDITSPRMEIYRGAALIY 94 (153)
T ss_dssp SSSEEEEETCTTCCHHHHHHHHH--SCCEEEEECSSCSSTT------------------EECCCSSSCCHHHHTTEEEEE
T ss_pred CCCcEEEEccCCChHHHHHHHHh--CCCeEEEEECCccccc------------------eEEccCCCCcccccCCcCEEE
Confidence 4569999999999 699999875 3679999999885432 7888988743211 4799998
Q ss_pred ecccccCcccHHHHHHHHHhcccCCCEEEEEeecC
Q 025144 147 MGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNK 181 (257)
Q Consensus 147 ~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 181 (257)
+... -+++...+.++.+ +-|.-+++..+..
T Consensus 95 sirP---P~El~~~i~~lA~--~v~adliI~pL~~ 124 (153)
T 2k4m_A 95 SIRP---PAEIHSSLMRVAD--AVGARLIIKPLTG 124 (153)
T ss_dssp EESC---CTTTHHHHHHHHH--HHTCEEEEECBTT
T ss_pred EcCC---CHHHHHHHHHHHH--HcCCCEEEEcCCC
Confidence 7654 2344555555555 3366777765554
No 293
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.38 E-value=7e-06 Score=70.90 Aligned_cols=124 Identities=20% Similarity=0.208 Sum_probs=87.6
Q ss_pred HHHHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCC------------CceEEEEeCChhHHHHHHhhhhhhhhcc
Q 025144 54 HRIWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGS------------QGKVIGLDFSKNQLSMASSRQDLVSKAC 121 (257)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~------------~~~v~~~D~s~~~~~~a~~~~~~~~~~~ 121 (257)
.+...+.+..++...++.+|+|.+||+|.+.....+.+.. ...++|+|+++.+...|+.++--.+.
T Consensus 202 P~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~-- 279 (530)
T 3ufb_A 202 PRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGL-- 279 (530)
T ss_dssp CHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTC--
T ss_pred cHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCC--
Confidence 4455677777888888889999999999998877664311 23699999999999999877543332
Q ss_pred CCCeeEEEccCCCCCC----CCCcccEEEecccccCcc---------------c-HHHHHHHHHhccc-------CCCEE
Q 025144 122 YKNIEWVEGDALDLPF----SDCFFDAITMGYGLRNVV---------------D-KRKALEESFRVLK-------PGSRI 174 (257)
Q Consensus 122 ~~~~~~~~~d~~~~~~----~~~~~D~v~~~~~l~~~~---------------~-~~~~l~~~~~~Lk-------~gG~l 174 (257)
....+..+|....+. +..+||+|+++..+..-. + -..++.++.+.|| +||++
T Consensus 280 -~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~ 358 (530)
T 3ufb_A 280 -EYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRA 358 (530)
T ss_dssp -SCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEE
T ss_pred -ccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceE
Confidence 345677888765432 235799999988774221 1 1345677777776 69998
Q ss_pred EEEeec
Q 025144 175 SVLDFN 180 (257)
Q Consensus 175 ~~~~~~ 180 (257)
.++.++
T Consensus 359 avVlP~ 364 (530)
T 3ufb_A 359 AVVVPN 364 (530)
T ss_dssp EEEEEH
T ss_pred EEEecc
Confidence 877643
No 294
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.36 E-value=3.5e-06 Score=66.04 Aligned_cols=107 Identities=18% Similarity=0.152 Sum_probs=68.3
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEE
Q 025144 67 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAIT 146 (257)
Q Consensus 67 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 146 (257)
..++.+|||+||++|.++..+++.. +-..|.++|+...+...... ....+ .++.....+.....+..+.+|+|+
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~-gv~sV~Gvdlg~~~~~~P~~-~~~~~----~~iv~~~~~~di~~l~~~~~DlVl 152 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQK-EVMSVKGYTLGIEGHEKPIH-MQTLG----WNIVKFKDKSNVFTMPTEPSDTLL 152 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTSCCCCC-CCBTT----GGGEEEECSCCTTTSCCCCCSEEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhc-CCceeeeEEecccccccccc-ccccC----CceEEeecCceeeecCCCCcCEEe
Confidence 4578899999999999999999763 34478999997643111100 00000 133333333332234567899999
Q ss_pred ecccccCcc----c---HHHHHHHHHhcccCC-CEEEEEeec
Q 025144 147 MGYGLRNVV----D---KRKALEESFRVLKPG-SRISVLDFN 180 (257)
Q Consensus 147 ~~~~l~~~~----~---~~~~l~~~~~~Lk~g-G~l~~~~~~ 180 (257)
+..... .. | ...+|.-+.++|+|| |.+++-.+.
T Consensus 153 sD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 153 CDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp ECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred ecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 976655 21 1 134577778899999 999887655
No 295
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.13 E-value=3.7e-06 Score=67.31 Aligned_cols=89 Identities=20% Similarity=0.263 Sum_probs=71.5
Q ss_pred HHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC
Q 025144 57 WKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP 136 (257)
Q Consensus 57 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~ 136 (257)
+...++..+.+.++..++|..+|.|..+..+++.+++..+|+++|.++.+++.++ ++. . .++.++++++.++.
T Consensus 45 Ll~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL~--~----~Rv~lv~~nF~~l~ 117 (347)
T 3tka_A 45 LLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TID--D----PRFSIIHGPFSALG 117 (347)
T ss_dssp TTHHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TCC--C----TTEEEEESCGGGHH
T ss_pred cHHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hhc--C----CcEEEEeCCHHHHH
Confidence 4455666777889999999999999999999998777889999999999999984 442 1 68999999998753
Q ss_pred -----CC-CCcccEEEeccccc
Q 025144 137 -----FS-DCFFDAITMGYGLR 152 (257)
Q Consensus 137 -----~~-~~~~D~v~~~~~l~ 152 (257)
.. .+++|.|++...+.
T Consensus 118 ~~L~~~g~~~~vDgILfDLGVS 139 (347)
T 3tka_A 118 EYVAERDLIGKIDGILLDLGVS 139 (347)
T ss_dssp HHHHHTTCTTCEEEEEEECSCC
T ss_pred HHHHhcCCCCcccEEEECCccC
Confidence 11 13699999876655
No 296
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=98.11 E-value=7.9e-05 Score=60.46 Aligned_cols=154 Identities=8% Similarity=0.037 Sum_probs=100.2
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhc------------------cCCCeeEEE
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKA------------------CYKNIEWVE 129 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~------------------~~~~~~~~~ 129 (257)
.+...|+.+|||.......+.... ++..++-+|. |++++.-++.+...+.. ...+..++.
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~-~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~ 173 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMF-PHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAA 173 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHC-TTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEE
T ss_pred CCCcEEEEeCCCCccHHHHhcCcC-CCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEe
Confidence 456799999999998888887652 4667777887 78887777766543210 015789999
Q ss_pred ccCCCCC--------C-CCCcccEEEecccccCcc--cHHHHHHHHHhcccCCCEEEEEeecCC---CchhHHHHHHHHH
Q 025144 130 GDALDLP--------F-SDCFFDAITMGYGLRNVV--DKRKALEESFRVLKPGSRISVLDFNKS---TQPFTTAIQEWMI 195 (257)
Q Consensus 130 ~d~~~~~--------~-~~~~~D~v~~~~~l~~~~--~~~~~l~~~~~~Lk~gG~l~~~~~~~~---~~~~~~~~~~~~~ 195 (257)
.|+.+.. . ..+...++++-.++.+++ ....+++.+.+.. |+|.+++.+...+ .......+...+.
T Consensus 174 ~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~~~~~~~fg~~m~~~l~ 252 (334)
T 1rjd_A 174 CDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGGSQPNDRFGAIMQSNLK 252 (334)
T ss_dssp CCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCCCSTTCCHHHHHHHHHH
T ss_pred cCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCCCCCcchHHHHHHHHhh
Confidence 9998731 1 235678888999999995 4677788888776 7888777776555 3222222211111
Q ss_pred hhhhhhhhccCCchhhhhhhHHHHhccCCHHHHHHHHHHcCce
Q 025144 196 DNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFS 238 (257)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 238 (257)
.....++. +...+.+.++..+.|.++||+
T Consensus 253 ~~rg~~l~--------------~~~~y~s~~~~~~rl~~~Gf~ 281 (334)
T 1rjd_A 253 ESRNLEMP--------------TLMTYNSKEKYASRWSAAPNV 281 (334)
T ss_dssp HHHCCCCT--------------TTTTTCSHHHHHGGGTTSSEE
T ss_pred cccCCccc--------------ccccCCCHHHHHHHHHHCCCC
Confidence 10101110 111356888889999999996
No 297
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.99 E-value=2.1e-05 Score=60.30 Aligned_cols=107 Identities=17% Similarity=0.184 Sum_probs=64.7
Q ss_pred CCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEc-cCCCCCCCCCcccE
Q 025144 66 GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEG-DALDLPFSDCFFDA 144 (257)
Q Consensus 66 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~D~ 144 (257)
-+.|+.+|+|+||+.|.++...++..+ -..|.|.++.... . ... ..... .+..-+.+.++ |+.++. +.++|+
T Consensus 70 likpg~~VVDLGaAPGGWSQvAa~~~~-vg~V~G~vig~D~-~-~~P-~~~~~-~Gv~~i~~~~G~Df~~~~--~~~~Dv 142 (269)
T 2px2_A 70 FVQPIGKVVDLGCGRGGWSYYAATMKN-VQEVRGYTKGGPG-H-EEP-MLMQS-YGWNIVTMKSGVDVFYKP--SEISDT 142 (269)
T ss_dssp SCCCCEEEEEETCTTSHHHHHHTTSTT-EEEEEEECCCSTT-S-CCC-CCCCS-TTGGGEEEECSCCGGGSC--CCCCSE
T ss_pred CCCCCCEEEEcCCCCCHHHHHHhhhcC-CCCceeEEEcccc-c-cCC-CcccC-CCceEEEeeccCCccCCC--CCCCCE
Confidence 467899999999999999999987621 1244555554331 0 000 00000 00011345556 988743 457999
Q ss_pred EEecccccCcc----cH---HHHHHHHHhcccCCC-EEEEEeec
Q 025144 145 ITMGYGLRNVV----DK---RKALEESFRVLKPGS-RISVLDFN 180 (257)
Q Consensus 145 v~~~~~l~~~~----~~---~~~l~~~~~~Lk~gG-~l~~~~~~ 180 (257)
|+|...-. -. |. ...|.-+.++|+||| .+++-.+.
T Consensus 143 VLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 143 LLCDIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp EEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred EEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 99866543 21 11 124666778999999 88887666
No 298
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.96 E-value=8.6e-05 Score=58.02 Aligned_cols=109 Identities=17% Similarity=0.158 Sum_probs=70.8
Q ss_pred hCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEc-cCCCCCCCCCccc
Q 025144 65 SGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEG-DALDLPFSDCFFD 143 (257)
Q Consensus 65 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~D 143 (257)
..+.++.+|||+||++|.++.+.+... ...+|.++|+...-.+.-. .....+. ..+.+... |+..++. .++|
T Consensus 90 ~~l~~~~~VlDLGaapGGwsq~~~~~~-gv~~V~avdvG~~~he~P~-~~~ql~w---~lV~~~~~~Dv~~l~~--~~~D 162 (321)
T 3lkz_A 90 RFLEPVGKVIDLGCGRGGWCYYMATQK-RVQEVRGYTKGGPGHEEPQ-LVQSYGW---NIVTMKSGVDVFYRPS--ECCD 162 (321)
T ss_dssp TSCCCCEEEEEETCTTCHHHHHHTTCT-TEEEEEEECCCSTTSCCCC-CCCBTTG---GGEEEECSCCTTSSCC--CCCS
T ss_pred cCCCCCCEEEEeCCCCCcHHHHHHhhc-CCCEEEEEEcCCCCccCcc-hhhhcCC---cceEEEeccCHhhCCC--CCCC
Confidence 456778899999999999999888774 2347999998664211000 0011111 34777777 7766653 5699
Q ss_pred EEEecccccCcccH-------HHHHHHHHhcccCC-CEEEEEeecC
Q 025144 144 AITMGYGLRNVVDK-------RKALEESFRVLKPG-SRISVLDFNK 181 (257)
Q Consensus 144 ~v~~~~~l~~~~~~-------~~~l~~~~~~Lk~g-G~l~~~~~~~ 181 (257)
+|+|.-. ..-+++ .+.|+-+.+.|++| |.+++-.+..
T Consensus 163 ~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~p 207 (321)
T 3lkz_A 163 TLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCP 207 (321)
T ss_dssp EEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred EEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCC
Confidence 9998766 433321 22566667889888 8887755554
No 299
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.93 E-value=8.1e-05 Score=56.29 Aligned_cols=110 Identities=16% Similarity=0.189 Sum_probs=72.1
Q ss_pred CCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEc-cCCCCCCCCCcccE
Q 025144 66 GAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEG-DALDLPFSDCFFDA 144 (257)
Q Consensus 66 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~D~ 144 (257)
.+.++.+|+|+||++|.++...+...+ ..+|.++|+...-.+.-+ .....+ +..+++.++ |+..++ ..++|.
T Consensus 75 ~l~~g~~VvDLGaapGGWSq~~a~~~g-~~~V~avdvG~~ghe~P~-~~~s~g---wn~v~fk~gvDv~~~~--~~~~Dt 147 (267)
T 3p8z_A 75 MVIPEGRVIDLGCGRGGWSYYCAGLKK-VTEVRGYTKGGPGHEEPV-PMSTYG---WNIVKLMSGKDVFYLP--PEKCDT 147 (267)
T ss_dssp SSCCCEEEEEESCTTSHHHHHHHTSTT-EEEEEEECCCSTTSCCCC-CCCCTT---TTSEEEECSCCGGGCC--CCCCSE
T ss_pred CCCCCCEEEEcCCCCCcHHHHHHHhcC-CCEEEEEecCCCCccCcc-hhhhcC---cCceEEEeccceeecC--CccccE
Confidence 567888999999999999998887742 348999998654321100 011112 257899998 876554 366999
Q ss_pred EEecccccCcc---cH---HHHHHHHHhcccCCCEEEEEeecCCC
Q 025144 145 ITMGYGLRNVV---DK---RKALEESFRVLKPGSRISVLDFNKST 183 (257)
Q Consensus 145 v~~~~~l~~~~---~~---~~~l~~~~~~Lk~gG~l~~~~~~~~~ 183 (257)
|+|...-..-. +. .+.|+-+.+.|++ |.+++-.+....
T Consensus 148 llcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~ 191 (267)
T 3p8z_A 148 LLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYM 191 (267)
T ss_dssp EEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCS
T ss_pred EEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCC
Confidence 99966542221 12 2356666788988 788775555444
No 300
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.91 E-value=4.9e-05 Score=60.80 Aligned_cols=57 Identities=19% Similarity=0.216 Sum_probs=46.2
Q ss_pred HHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhh
Q 025144 57 WKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLV 117 (257)
Q Consensus 57 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~ 117 (257)
+.+.++.... .++..|||++||+|..+..+++. +.+++|+|+++.+++.+++++...
T Consensus 224 l~~~~i~~~~-~~~~~vlD~f~GsGt~~~~a~~~---g~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 224 LAERLVRMFS-FVGDVVLDPFAGTGTTLIAAARW---GRRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp HHHHHHHHHC-CTTCEEEETTCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHHh
Confidence 3444444444 57889999999999999988765 579999999999999999998654
No 301
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.81 E-value=0.00031 Score=55.81 Aligned_cols=131 Identities=15% Similarity=0.091 Sum_probs=77.6
Q ss_pred CCCeEEEecCCCChhHHHHHH---HhCCCc--eEEEEeCCh--------hHHHHHHhh-hhhhhhccCC--CeeEEEccC
Q 025144 69 TGDNVLDVCCGSGDLSFLLSE---QVGSQG--KVIGLDFSK--------NQLSMASSR-QDLVSKACYK--NIEWVEGDA 132 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~---~~~~~~--~v~~~D~s~--------~~~~~a~~~-~~~~~~~~~~--~~~~~~~d~ 132 (257)
+.-+|||+|-|+|.......+ ..++.. +++.+|..+ +......+. ....+.-... .+.+..+|+
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa 175 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDA 175 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCH
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechH
Confidence 345899999999987543322 224554 456666321 111111111 1111110012 346677887
Q ss_pred CCC-C-CCCCcccEEEecccccCcccH----HHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHhhhhhhhhccC
Q 025144 133 LDL-P-FSDCFFDAITMGYGLRNVVDK----RKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMIDNVVVPVASGY 206 (257)
Q Consensus 133 ~~~-~-~~~~~~D~v~~~~~l~~~~~~----~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (257)
.+. + +++..+|+++... +.--.+| ..+++.+++.++|||.+.-
T Consensus 176 ~~~l~~l~~~~~Da~flDg-FsP~kNPeLWs~e~f~~l~~~~~pgg~laT------------------------------ 224 (308)
T 3vyw_A 176 RKRIKEVENFKADAVFHDA-FSPYKNPELWTLDFLSLIKERIDEKGYWVS------------------------------ 224 (308)
T ss_dssp HHHGGGCCSCCEEEEEECC-SCTTTSGGGGSHHHHHHHHTTEEEEEEEEE------------------------------
T ss_pred HHHHhhhcccceeEEEeCC-CCcccCcccCCHHHHHHHHHHhCCCcEEEE------------------------------
Confidence 652 2 3445799999754 2222222 6899999999999999852
Q ss_pred CchhhhhhhHHHHhccCCHHHHHHHHHHcCceeeEEeee
Q 025144 207 GLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYEL 245 (257)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 245 (257)
|-....++..|.++||++.+..-+
T Consensus 225 ---------------Ytaag~VRR~L~~aGF~V~k~~G~ 248 (308)
T 3vyw_A 225 ---------------YSSSLSVRKSLLTLGFKVGSSREI 248 (308)
T ss_dssp ---------------SCCCHHHHHHHHHTTCEEEEEECC
T ss_pred ---------------EeCcHHHHHHHHHCCCEEEecCCC
Confidence 224568889999999997765543
No 302
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.66 E-value=0.00024 Score=57.85 Aligned_cols=72 Identities=13% Similarity=0.044 Sum_probs=55.8
Q ss_pred HHHHHHhhhCCC------CCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEc
Q 025144 57 WKRMAVSWSGAK------TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEG 130 (257)
Q Consensus 57 ~~~~~~~~~~~~------~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~ 130 (257)
..+.+...+.+. ++..|||||+|.|.++..|++.. ...+++++|+++.++...++.. . .++++++.+
T Consensus 40 i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~-~~~~vvavE~D~~l~~~L~~~~-~-----~~~l~ii~~ 112 (353)
T 1i4w_A 40 VYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKY-CPRQYSLLEKRSSLYKFLNAKF-E-----GSPLQILKR 112 (353)
T ss_dssp HHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHH-CCSEEEEECCCHHHHHHHHHHT-T-----TSSCEEECS
T ss_pred HHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhC-CCCEEEEEecCHHHHHHHHHhc-c-----CCCEEEEEC
Confidence 344455554444 35799999999999999999874 2358999999999999888776 2 168999999
Q ss_pred cCCCC
Q 025144 131 DALDL 135 (257)
Q Consensus 131 d~~~~ 135 (257)
|+.++
T Consensus 113 D~l~~ 117 (353)
T 1i4w_A 113 DPYDW 117 (353)
T ss_dssp CTTCH
T ss_pred Cccch
Confidence 99764
No 303
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=97.43 E-value=0.0041 Score=49.85 Aligned_cols=106 Identities=16% Similarity=0.021 Sum_probs=74.3
Q ss_pred CeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC---------CCCCc
Q 025144 71 DNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP---------FSDCF 141 (257)
Q Consensus 71 ~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~---------~~~~~ 141 (257)
..|+++|||-=.....+.. +.+..++-+| .|+.++..++.+...+.....+..++..|+.+ . +..+.
T Consensus 104 ~QvV~LGaGlDTra~Rl~~--~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~ 179 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDW--PTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSA 179 (310)
T ss_dssp CEEEEETCTTCCHHHHSCC--CTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTS
T ss_pred CeEEEeCCCCCchhhhccC--CCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCC
Confidence 4799999997655433321 1246889999 48899888888864332222678899999986 2 22234
Q ss_pred ccEEEecccccCcc--cHHHHHHHHHhcccCCCEEEEEeec
Q 025144 142 FDAITMGYGLRNVV--DKRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 142 ~D~v~~~~~l~~~~--~~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
.=++++-.++++++ +...+++.+...+.||+.+++....
T Consensus 180 Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~ 220 (310)
T 2uyo_A 180 RTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSP 220 (310)
T ss_dssp CEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCC
T ss_pred CEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecC
Confidence 56777888899886 4677899999888888888665444
No 304
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.39 E-value=0.00062 Score=53.22 Aligned_cols=101 Identities=14% Similarity=0.001 Sum_probs=67.3
Q ss_pred hCCCCCCeEEEecC------CCChhHHHHHHHhCCC-ceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCC
Q 025144 65 SGAKTGDNVLDVCC------GSGDLSFLLSEQVGSQ-GKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF 137 (257)
Q Consensus 65 ~~~~~~~~vLdiG~------G~G~~~~~l~~~~~~~-~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~ 137 (257)
+..+.+.+|||+|+ -+|. .++++..|. +.++++|+.+-.. . .. .++++|......
T Consensus 105 ~~vp~gmrVLDLGA~s~kg~APGS---~VLr~~~p~g~~VVavDL~~~~s-----d---------a~-~~IqGD~~~~~~ 166 (344)
T 3r24_A 105 LAVPYNMRVIHFGAGSDKGVAPGT---AVLRQWLPTGTLLVDSDLNDFVS-----D---------AD-STLIGDCATVHT 166 (344)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH---HHHHHHSCTTCEEEEEESSCCBC-----S---------SS-EEEESCGGGEEE
T ss_pred EeecCCCEEEeCCCCCCCCCCCcH---HHHHHhCCCCcEEEEeeCccccc-----C---------CC-eEEEcccccccc
Confidence 45677899999997 4454 344444565 5999999866320 0 12 459999766433
Q ss_pred CCCcccEEEeccccc---Cc--cc------HHHHHHHHHhcccCCCEEEEEeecCCCc
Q 025144 138 SDCFFDAITMGYGLR---NV--VD------KRKALEESFRVLKPGSRISVLDFNKSTQ 184 (257)
Q Consensus 138 ~~~~~D~v~~~~~l~---~~--~~------~~~~l~~~~~~Lk~gG~l~~~~~~~~~~ 184 (257)
.++||+|++...-. +. +. .+.++.-+.+.|+|||.+++-.+.....
T Consensus 167 -~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg~ 223 (344)
T 3r24_A 167 -ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWN 223 (344)
T ss_dssp -SSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCC
T ss_pred -CCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCCH
Confidence 47899999754322 11 11 3566777888999999998877666553
No 305
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=97.22 E-value=0.059 Score=43.52 Aligned_cols=160 Identities=10% Similarity=0.052 Sum_probs=96.8
Q ss_pred CCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhh--------------------ccCCCeeEE
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSK--------------------ACYKNIEWV 128 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~--------------------~~~~~~~~~ 128 (257)
+...|+-+|||.=.....+.....++..++=+|. |+.++.-++.+...+. -...+..++
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v 168 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVI 168 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEE
T ss_pred CCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEE
Confidence 4679999999986655555432113557777777 5565554444432110 002578899
Q ss_pred EccCCCC----------CCCCCcccEEEecccccCcc--cHHHHHHHHHhcccCCCEEEEEeecCCCchhHHHHHHHHHh
Q 025144 129 EGDALDL----------PFSDCFFDAITMGYGLRNVV--DKRKALEESFRVLKPGSRISVLDFNKSTQPFTTAIQEWMID 196 (257)
Q Consensus 129 ~~d~~~~----------~~~~~~~D~v~~~~~l~~~~--~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~ 196 (257)
..|+.+. .++.+..-++++-.++.+++ ....+++.+.+.. |+|.+++.+...+...+...+...+.
T Consensus 169 ~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f-~~~~~i~yE~i~p~d~fg~~M~~~l~- 246 (334)
T 3iei_A 169 GADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSF-ERAMFINYEQVNMGDRFGQIMIENLR- 246 (334)
T ss_dssp ECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCTTSHHHHHHHHHHH-
T ss_pred ccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhC-CCceEEEEeccCCCCHHHHHHHHHHH-
Confidence 9999773 13445566788888888885 4677788888766 45666677766655544333322221
Q ss_pred hhhhhhhccCCchhhhhhhHHHHhccCCHHHHHHHHHHcCceeeEEeee
Q 025144 197 NVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYEL 245 (257)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 245 (257)
....++ . ++..+.+.++..+.|.++||+.++..+.
T Consensus 247 ~~g~pl----~----------sl~~y~t~~~~~~r~~~~Gw~~~~~~d~ 281 (334)
T 3iei_A 247 RRQCDL----A----------GVETCKSLESQKERLLSNGWETASAVDM 281 (334)
T ss_dssp TTTCCC----T----------TGGGGGCHHHHHHHHHTTTCSEEEEEEH
T ss_pred HhCCCC----c----------ccccCCCHHHHHHHHHHcCCCcceeecH
Confidence 111111 0 1123557888899999999998765543
No 306
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.21 E-value=0.00032 Score=54.93 Aligned_cols=104 Identities=8% Similarity=-0.101 Sum_probs=80.3
Q ss_pred CCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC----CCCCCcccEE
Q 025144 70 GDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL----PFSDCFFDAI 145 (257)
Q Consensus 70 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~~D~v 145 (257)
+..+||+=+|+|.+++.+++. ..+++.+|.++...+..+++++.. .++++++.|.... ..+...||+|
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~---~d~~vfvE~~~~a~~~L~~Nl~~~-----~~~~V~~~D~~~~L~~l~~~~~~fdLV 163 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRS---QDRLYLCELHPTEYNFLLKLPHFN-----KKVYVNHTDGVSKLNALLPPPEKRGLI 163 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCT---TSEEEEECCSHHHHHHHTTSCCTT-----SCEEEECSCHHHHHHHHCSCTTSCEEE
T ss_pred CCCceeEeCCcHHHHHHHcCC---CCeEEEEeCCHHHHHHHHHHhCcC-----CcEEEEeCcHHHHHHHhcCCCCCccEE
Confidence 457999999999999998863 479999999999999999998652 5899999997542 1234579999
Q ss_pred EecccccCcccHHHHHHHHHh--cccCCCEEEEEeecC
Q 025144 146 TMGYGLRNVVDKRKALEESFR--VLKPGSRISVLDFNK 181 (257)
Q Consensus 146 ~~~~~l~~~~~~~~~l~~~~~--~Lk~gG~l~~~~~~~ 181 (257)
++.-....-.+..+++..+.+ .+.++|++++.-+..
T Consensus 164 fiDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~ 201 (283)
T 2oo3_A 164 FIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVV 201 (283)
T ss_dssp EECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEEEEEES
T ss_pred EECCCCCCCcHHHHHHHHHHHhCccCCCeEEEEEEecc
Confidence 998887755566777766666 446899988765443
No 307
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.14 E-value=0.0015 Score=51.06 Aligned_cols=56 Identities=21% Similarity=0.240 Sum_probs=44.6
Q ss_pred HHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhh
Q 025144 57 WKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDL 116 (257)
Q Consensus 57 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~ 116 (257)
+.+.++.... .++..|||..||+|..+....+. +.+++|+|+++..++.++++++.
T Consensus 201 l~~~~i~~~~-~~~~~vlD~f~GsGtt~~~a~~~---gr~~ig~e~~~~~~~~~~~r~~~ 256 (260)
T 1g60_A 201 LIERIIRASS-NPNDLVLDCFMGSGTTAIVAKKL---GRNFIGCDMNAEYVNQANFVLNQ 256 (260)
T ss_dssp HHHHHHHHHC-CTTCEEEESSCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC
T ss_pred HHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHh
Confidence 3333444443 67889999999999999887765 57999999999999999998753
No 308
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.08 E-value=0.013 Score=48.28 Aligned_cols=74 Identities=20% Similarity=0.214 Sum_probs=57.9
Q ss_pred CeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCC--------CCCcc
Q 025144 71 DNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF--------SDCFF 142 (257)
Q Consensus 71 ~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~--------~~~~~ 142 (257)
.+++|+-||.|.++.-+.+. + ...+.++|+++.+.+..+.+. ++..++++|+.++.. ....+
T Consensus 3 ~~vidLFsG~GGlslG~~~a-G-~~~v~avE~d~~a~~t~~~N~--------~~~~~~~~DI~~~~~~~~~~~~~~~~~~ 72 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA-G-FDVKMAVEIDQHAINTHAINF--------PRSLHVQEDVSLLNAEIIKGFFKNDMPI 72 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH-T-CEEEEEECSCHHHHHHHHHHC--------TTSEEECCCGGGCCHHHHHHHHCSCCCC
T ss_pred CeEEEEccCcCHHHHHHHHC-C-CcEEEEEeCCHHHHHHHHHhC--------CCCceEecChhhcCHHHHHhhcccCCCe
Confidence 47999999999999998776 2 235779999999988887775 567788899987631 24679
Q ss_pred cEEEecccccCc
Q 025144 143 DAITMGYGLRNV 154 (257)
Q Consensus 143 D~v~~~~~l~~~ 154 (257)
|+|+.......+
T Consensus 73 D~i~ggpPCQ~f 84 (376)
T 3g7u_A 73 DGIIGGPPCQGF 84 (376)
T ss_dssp CEEEECCCCCTT
T ss_pred eEEEecCCCCCc
Confidence 999987776655
No 309
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.70 E-value=0.0091 Score=49.07 Aligned_cols=100 Identities=14% Similarity=0.163 Sum_probs=68.1
Q ss_pred hhhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCc-eEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC-----
Q 025144 63 SWSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL----- 135 (257)
Q Consensus 63 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~----- 135 (257)
...++.++.+||-+|+|. |..+..+++.. +. +|+++|.+++.++.+++.- --.++..+-.++
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~--Ga~~Vi~~~~~~~~~~~a~~lG---------a~~vi~~~~~~~~~~~~ 252 (371)
T 1f8f_A 184 NALKVTPASSFVTWGAGAVGLSALLAAKVC--GASIIIAVDIVESRLELAKQLG---------ATHVINSKTQDPVAAIK 252 (371)
T ss_dssp TTTCCCTTCEEEEESCSHHHHHHHHHHHHH--TCSEEEEEESCHHHHHHHHHHT---------CSEEEETTTSCHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEECCCHHHHHHHHHcC---------CCEEecCCccCHHHHHH
Confidence 345678899999999986 88888888875 45 6999999998888876531 112232221111
Q ss_pred CCCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 136 PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 136 ~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
...++.+|+|+-.-. ....+....+.|+++|.+++...
T Consensus 253 ~~~~gg~D~vid~~g------~~~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 253 EITDGGVNFALESTG------SPEILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp HHTTSCEEEEEECSC------CHHHHHHHHHTEEEEEEEEECCC
T ss_pred HhcCCCCcEEEECCC------CHHHHHHHHHHHhcCCEEEEeCC
Confidence 011236999985432 23567888999999999977644
No 310
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.62 E-value=0.0067 Score=50.63 Aligned_cols=68 Identities=12% Similarity=0.055 Sum_probs=50.0
Q ss_pred CCCCCeEEEecCCCChhHHHHH-HHhCCCceEEEEeCChhHHHHHHhhhhhhhhccC-CCeeEEEccCCC
Q 025144 67 AKTGDNVLDVCCGSGDLSFLLS-EQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACY-KNIEWVEGDALD 134 (257)
Q Consensus 67 ~~~~~~vLdiG~G~G~~~~~l~-~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~-~~~~~~~~d~~~ 134 (257)
..++..++|+||+.|..+..++ +..++..+|+++|+++...+..+++++....... +++.+++.-+.+
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~~ 293 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAGE 293 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEECS
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEEC
Confidence 4688899999999999999888 4433337999999999999999988865100011 366666655544
No 311
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.61 E-value=0.0089 Score=49.67 Aligned_cols=105 Identities=19% Similarity=0.177 Sum_probs=69.5
Q ss_pred hhhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCc-eEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC-C---
Q 025144 63 SWSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-P--- 136 (257)
Q Consensus 63 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-~--- 136 (257)
...++.++.+||-+|+|. |..+..+++.. +. +|+++|.+++.++.+++. ...++..+-.+. .
T Consensus 179 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~l----------Ga~~i~~~~~~~~~~~~ 246 (398)
T 2dph_A 179 VSAGVKPGSHVYIAGAGPVGRCAAAGARLL--GAACVIVGDQNPERLKLLSDA----------GFETIDLRNSAPLRDQI 246 (398)
T ss_dssp HHTTCCTTCEEEEECCSHHHHHHHHHHHHH--TCSEEEEEESCHHHHHHHHTT----------TCEEEETTSSSCHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEEcCCHHHHHHHHHc----------CCcEEcCCCcchHHHHH
Confidence 345778899999999986 88888888876 45 899999999888877643 122333222221 0
Q ss_pred ---CCCCcccEEEecccccCc--------ccHHHHHHHHHhcccCCCEEEEEee
Q 025144 137 ---FSDCFFDAITMGYGLRNV--------VDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 137 ---~~~~~~D~v~~~~~l~~~--------~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
.....+|+|+-.-.-... .+....+....+.|+++|.+++...
T Consensus 247 ~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~ 300 (398)
T 2dph_A 247 DQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGI 300 (398)
T ss_dssp HHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSC
T ss_pred HHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEecc
Confidence 112369999854432210 0123467888899999999876543
No 312
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.51 E-value=0.013 Score=43.36 Aligned_cols=96 Identities=17% Similarity=0.180 Sum_probs=62.6
Q ss_pred hhCCCCCCeEEEecC--CCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-----
Q 025144 64 WSGAKTGDNVLDVCC--GSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----- 136 (257)
Q Consensus 64 ~~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~----- 136 (257)
..+..++.+||..|+ |.|..+..++... +.+|+++|.+++.++.+++. + .. ..+ |..+..
T Consensus 33 ~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~~~~----g----~~-~~~--d~~~~~~~~~~ 99 (198)
T 1pqw_A 33 VGRLSPGERVLIHSATGGVGMAAVSIAKMI--GARIYTTAGSDAKREMLSRL----G----VE-YVG--DSRSVDFADEI 99 (198)
T ss_dssp TSCCCTTCEEEETTTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHTT----C----CS-EEE--ETTCSTHHHHH
T ss_pred HhCCCCCCEEEEeeCCChHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHc----C----CC-EEe--eCCcHHHHHHH
Confidence 346778899999995 4566677776664 57899999998877666432 1 11 122 222211
Q ss_pred ---CCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 137 ---FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 137 ---~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
...+.+|+++.+.. ...+....+.|+++|.++....
T Consensus 100 ~~~~~~~~~D~vi~~~g-------~~~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 100 LELTDGYGVDVVLNSLA-------GEAIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp HHHTTTCCEEEEEECCC-------THHHHHHHHTEEEEEEEEECSC
T ss_pred HHHhCCCCCeEEEECCc-------hHHHHHHHHHhccCCEEEEEcC
Confidence 12246999986542 2457788899999999877543
No 313
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.31 E-value=0.012 Score=52.56 Aligned_cols=107 Identities=17% Similarity=0.126 Sum_probs=64.4
Q ss_pred CCCeEEEecCCCChhHHHHHHHh------CC-----CceEEEEeC---ChhHHHHHHhhh-----------hhhhh----
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQV------GS-----QGKVIGLDF---SKNQLSMASSRQ-----------DLVSK---- 119 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~------~~-----~~~v~~~D~---s~~~~~~a~~~~-----------~~~~~---- 119 (257)
+.-+|+|+|.|+|.....+.+.+ +| ..+++.+|. +.+.+..+.... ...+.
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 44699999999999877665542 11 147999998 444444433221 11110
Q ss_pred -------ccCCCeeEEEccCCCC-C-CC---CCcccEEEecccccCc-cc--HHHHHHHHHhcccCCCEEE
Q 025144 120 -------ACYKNIEWVEGDALDL-P-FS---DCFFDAITMGYGLRNV-VD--KRKALEESFRVLKPGSRIS 175 (257)
Q Consensus 120 -------~~~~~~~~~~~d~~~~-~-~~---~~~~D~v~~~~~l~~~-~~--~~~~l~~~~~~Lk~gG~l~ 175 (257)
.+.-.+.+..+|+.+. + .. ++.+|.++....--.. ++ -..++..+.++++|||.+.
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~ 208 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFS 208 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEE
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEE
Confidence 0012456777777542 2 21 4679999975422111 11 2778999999999999874
No 314
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.25 E-value=0.083 Score=40.89 Aligned_cols=109 Identities=15% Similarity=0.157 Sum_probs=71.2
Q ss_pred CCeEEEecCCCChhHHHHHHH---h---CCCceEEEEe-----CChh----------------------HHHHHHh---h
Q 025144 70 GDNVLDVCCGSGDLSFLLSEQ---V---GSQGKVIGLD-----FSKN----------------------QLSMASS---R 113 (257)
Q Consensus 70 ~~~vLdiG~G~G~~~~~l~~~---~---~~~~~v~~~D-----~s~~----------------------~~~~a~~---~ 113 (257)
+..|+|+|+-.|..+..++.. + ++..+++++| +.+. .++...+ +
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 458999999999988876542 2 3457999999 3210 0111111 1
Q ss_pred hhhhhhccCCCeeEEEccCCCC-C-----CCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeecC
Q 025144 114 QDLVSKACYKNIEWVEGDALDL-P-----FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNK 181 (257)
Q Consensus 114 ~~~~~~~~~~~~~~~~~d~~~~-~-----~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 181 (257)
.+..+. ...++.++.+++.+. + .+.+++|+|.+..- ........++.+...|+|||++++-+++.
T Consensus 150 ~~~~g~-~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D--~Y~~t~~~le~~~p~l~~GGvIv~DD~~~ 220 (257)
T 3tos_A 150 SDFFGH-VTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLD--LYEPTKAVLEAIRPYLTKGSIVAFDELDN 220 (257)
T ss_dssp TSTTTT-SCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCC--CHHHHHHHHHHHGGGEEEEEEEEESSTTC
T ss_pred hhhcCC-CCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCc--ccchHHHHHHHHHHHhCCCcEEEEcCCCC
Confidence 111111 016899999999763 2 34567999998764 23445667999999999999998877643
No 315
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=96.22 E-value=0.026 Score=50.26 Aligned_cols=107 Identities=16% Similarity=0.125 Sum_probs=64.9
Q ss_pred CCCeEEEecCCCChhHHHHHHHh------CC-----CceEEEEeC---ChhHHHHHHhhhh-----------hhhh----
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQV------GS-----QGKVIGLDF---SKNQLSMASSRQD-----------LVSK---- 119 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~------~~-----~~~v~~~D~---s~~~~~~a~~~~~-----------~~~~---- 119 (257)
+.-+|||+|-|+|.......+.. +| ..+++.+|. +++.+..+..... ..+.
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 34599999999998876665543 11 246999998 7777764443211 1110
Q ss_pred -------ccCCCeeEEEccCCCC-C-CC---CCcccEEEecccccCc-cc--HHHHHHHHHhcccCCCEEE
Q 025144 120 -------ACYKNIEWVEGDALDL-P-FS---DCFFDAITMGYGLRNV-VD--KRKALEESFRVLKPGSRIS 175 (257)
Q Consensus 120 -------~~~~~~~~~~~d~~~~-~-~~---~~~~D~v~~~~~l~~~-~~--~~~~l~~~~~~Lk~gG~l~ 175 (257)
.....+.+..+|+.+. + .. ...+|+++....-... ++ -..++..+.+.++|||.+.
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~ 216 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLA 216 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEE
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEE
Confidence 0002344566666542 1 11 3679999975422111 12 3678999999999999885
No 316
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=96.21 E-value=0.045 Score=44.13 Aligned_cols=75 Identities=12% Similarity=0.050 Sum_probs=54.6
Q ss_pred CCeEEEecCCCChhHHHHHHHhCCC-ceE-EEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC---CCCCcccE
Q 025144 70 GDNVLDVCCGSGDLSFLLSEQVGSQ-GKV-IGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP---FSDCFFDA 144 (257)
Q Consensus 70 ~~~vLdiG~G~G~~~~~l~~~~~~~-~~v-~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~D~ 144 (257)
.-+++|+-||.|.++.-+.+. +-. ..+ .++|+++.+.+..+.+.. .. ++..|+.++. ++...+|+
T Consensus 10 ~~~vidLFaG~GG~~~G~~~a-G~~~~~v~~a~e~d~~a~~ty~~N~~--------~~-~~~~DI~~~~~~~i~~~~~Di 79 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERS-SININATFIPFDINEIANKIYSKNFK--------EE-VQVKNLDSISIKQIESLNCNT 79 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHS-SCCCCEEEEEECCCHHHHHHHHHHHC--------CC-CBCCCTTTCCHHHHHHTCCCE
T ss_pred CCEEEEECCChhHHHHHHHHc-CCCceEEEEEEECCHHHHHHHHHHCC--------CC-cccCChhhcCHHHhccCCCCE
Confidence 348999999999999888765 221 345 699999998888877762 22 5678888764 22235899
Q ss_pred EEecccccCc
Q 025144 145 ITMGYGLRNV 154 (257)
Q Consensus 145 v~~~~~l~~~ 154 (257)
++.......+
T Consensus 80 l~ggpPCQ~f 89 (327)
T 3qv2_A 80 WFMSPPCQPY 89 (327)
T ss_dssp EEECCCCTTC
T ss_pred EEecCCccCc
Confidence 9987776655
No 317
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.15 E-value=0.032 Score=45.36 Aligned_cols=94 Identities=14% Similarity=0.122 Sum_probs=65.8
Q ss_pred hCCCCCCeEEEecCCC-ChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCccc
Q 025144 65 SGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFD 143 (257)
Q Consensus 65 ~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 143 (257)
.++.++.+||-+|+|. |..+..+++.. +.+|+++|.+++-++.+++. + --.++ .+...+ . ..+|
T Consensus 172 ~~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~l----G-----a~~v~-~~~~~~--~-~~~D 236 (348)
T 3two_A 172 SKVTKGTKVGVAGFGGLGSMAVKYAVAM--GAEVSVFARNEHKKQDALSM----G-----VKHFY-TDPKQC--K-EELD 236 (348)
T ss_dssp TTCCTTCEEEEESCSHHHHHHHHHHHHT--TCEEEEECSSSTTHHHHHHT----T-----CSEEE-SSGGGC--C-SCEE
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHhc----C-----CCeec-CCHHHH--h-cCCC
Confidence 4778899999999975 78888888875 67999999999888877653 1 11222 332222 2 2799
Q ss_pred EEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 144 AITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 144 ~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
+|+-.-.-. ..+....+.|+++|.+++...
T Consensus 237 ~vid~~g~~------~~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 237 FIISTIPTH------YDLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp EEEECCCSC------CCHHHHHTTEEEEEEEEECCC
T ss_pred EEEECCCcH------HHHHHHHHHHhcCCEEEEECC
Confidence 998533211 246677889999999987643
No 318
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.11 E-value=0.022 Score=46.08 Aligned_cols=100 Identities=14% Similarity=0.169 Sum_probs=68.0
Q ss_pred hhhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC--C--
Q 025144 63 SWSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP--F-- 137 (257)
Q Consensus 63 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~--~-- 137 (257)
...+..++.+||-.|+|. |..+..+++.. +.+|+++|.+++-++.+++.- --.++..+-.+.. .
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~lG---------a~~~i~~~~~~~~~~~~~ 228 (340)
T 3s2e_A 160 KVTDTRPGQWVVISGIGGLGHVAVQYARAM--GLRVAAVDIDDAKLNLARRLG---------AEVAVNARDTDPAAWLQK 228 (340)
T ss_dssp HTTTCCTTSEEEEECCSTTHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTT---------CSEEEETTTSCHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHcC---------CCEEEeCCCcCHHHHHHH
Confidence 345678899999999975 88889999885 679999999999888776531 1122222211110 0
Q ss_pred CCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 138 SDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 138 ~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
..+.+|+|+-... ....+....+.|+++|.+++...
T Consensus 229 ~~g~~d~vid~~g------~~~~~~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 229 EIGGAHGVLVTAV------SPKAFSQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp HHSSEEEEEESSC------CHHHHHHHHHHEEEEEEEEECSC
T ss_pred hCCCCCEEEEeCC------CHHHHHHHHHHhccCCEEEEeCC
Confidence 0136888875432 24567888899999999977643
No 319
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.10 E-value=0.0066 Score=49.39 Aligned_cols=75 Identities=17% Similarity=0.184 Sum_probs=55.3
Q ss_pred CeEEEecCCCChhHHHHHHHhCCC-ceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC---CCCCcccEEE
Q 025144 71 DNVLDVCCGSGDLSFLLSEQVGSQ-GKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP---FSDCFFDAIT 146 (257)
Q Consensus 71 ~~vLdiG~G~G~~~~~l~~~~~~~-~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~D~v~ 146 (257)
.+|+|+-||.|.++..+.+. +.. ..+.++|+++.+++..+.+. ++..++.+|+.++. ++...+|+++
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~-G~~~~~v~~~E~d~~a~~~~~~N~--------~~~~~~~~Di~~~~~~~~~~~~~D~l~ 73 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRES-CIPAQVVAAIDVNTVANEVYKYNF--------PHTQLLAKTIEGITLEEFDRLSFDMIL 73 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHH-TCSEEEEEEECCCHHHHHHHHHHC--------TTSCEECSCGGGCCHHHHHHHCCSEEE
T ss_pred CeEEEeCcCccHHHHHHHHC-CCCceEEEEEeCCHHHHHHHHHhc--------cccccccCCHHHccHhHcCcCCcCEEE
Confidence 47999999999999998876 221 36999999999999888886 45567888988764 1112589999
Q ss_pred ecccccCc
Q 025144 147 MGYGLRNV 154 (257)
Q Consensus 147 ~~~~l~~~ 154 (257)
.......+
T Consensus 74 ~gpPCq~f 81 (343)
T 1g55_A 74 MSPPCQPF 81 (343)
T ss_dssp ECCC----
T ss_pred EcCCCcch
Confidence 87775544
No 320
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.09 E-value=0.24 Score=39.84 Aligned_cols=73 Identities=18% Similarity=0.221 Sum_probs=52.9
Q ss_pred CCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCC-CCCcccEEEec
Q 025144 70 GDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF-SDCFFDAITMG 148 (257)
Q Consensus 70 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~D~v~~~ 148 (257)
+.+++|+.||.|.++..+.+. + ...+.++|+++..++..+.+.. ... .+|+.++.. .-..+|+|+..
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a-G-~~~v~~~e~d~~a~~t~~~N~~--------~~~--~~Di~~~~~~~~~~~D~l~~g 78 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC-G-AECVYSNEWDKYAQEVYEMNFG--------EKP--EGDITQVNEKTIPDHDILCAG 78 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-T-CEEEEEECCCHHHHHHHHHHHS--------CCC--BSCGGGSCGGGSCCCSEEEEE
T ss_pred CCcEEEECCCcCHHHHHHHHC-C-CeEEEEEeCCHHHHHHHHHHcC--------CCC--cCCHHHcCHhhCCCCCEEEEC
Confidence 468999999999999988765 2 3468889999999888887763 222 577776531 11248999987
Q ss_pred ccccCc
Q 025144 149 YGLRNV 154 (257)
Q Consensus 149 ~~l~~~ 154 (257)
.....+
T Consensus 79 pPCQ~f 84 (327)
T 2c7p_A 79 FPCQAF 84 (327)
T ss_dssp CCCTTT
T ss_pred CCCCCc
Confidence 665554
No 321
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.05 E-value=0.033 Score=46.17 Aligned_cols=103 Identities=17% Similarity=0.169 Sum_probs=69.1
Q ss_pred hhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCc-eEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCC-CC----
Q 025144 64 WSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD-LP---- 136 (257)
Q Consensus 64 ~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~-~~---- 136 (257)
..++.++.+||-+|+|. |..+..+++.. +. .|+++|.+++-++.+++. ....+..+-.+ +.
T Consensus 180 ~~~~~~g~~VlV~GaG~vG~~aiqlAk~~--Ga~~Vi~~~~~~~~~~~a~~l----------Ga~~i~~~~~~~~~~~v~ 247 (398)
T 1kol_A 180 TAGVGPGSTVYVAGAGPVGLAAAASARLL--GAAVVIVGDLNPARLAHAKAQ----------GFEIADLSLDTPLHEQIA 247 (398)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHHT----------TCEEEETTSSSCHHHHHH
T ss_pred HcCCCCCCEEEEECCcHHHHHHHHHHHHC--CCCeEEEEcCCHHHHHHHHHc----------CCcEEccCCcchHHHHHH
Confidence 45678899999999875 88888888885 55 799999999888887643 11223222111 00
Q ss_pred --CCCCcccEEEeccccc---------CcccHHHHHHHHHhcccCCCEEEEEe
Q 025144 137 --FSDCFFDAITMGYGLR---------NVVDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 137 --~~~~~~D~v~~~~~l~---------~~~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
.....+|+|+-.-.-. +.+++...+....+.|+++|.+++..
T Consensus 248 ~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 248 ALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp HHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred HHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 1123699998543321 12334567888999999999987754
No 322
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=96.02 E-value=0.033 Score=45.11 Aligned_cols=100 Identities=16% Similarity=0.087 Sum_probs=65.4
Q ss_pred hhhCCCCCCeEEEecCC--CChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC----
Q 025144 63 SWSGAKTGDNVLDVCCG--SGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP---- 136 (257)
Q Consensus 63 ~~~~~~~~~~vLdiG~G--~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~---- 136 (257)
...++.++.+||-+|+| .|..+..+++.. +++|+++|.+++-++.+++.- --.++...-.+..
T Consensus 138 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~lg---------a~~~~~~~~~~~~~~~~ 206 (340)
T 3gms_A 138 ETLNLQRNDVLLVNACGSAIGHLFAQLSQIL--NFRLIAVTRNNKHTEELLRLG---------AAYVIDTSTAPLYETVM 206 (340)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESSSTTHHHHHHHT---------CSEEEETTTSCHHHHHH
T ss_pred HhcccCCCCEEEEeCCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhCC---------CcEEEeCCcccHHHHHH
Confidence 44577889999999987 577888888875 579999999998888776531 1122222212210
Q ss_pred --CCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeec
Q 025144 137 --FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 137 --~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
.....+|+|+-+..- .. .....+.|+++|.++.....
T Consensus 207 ~~~~~~g~Dvvid~~g~------~~-~~~~~~~l~~~G~iv~~G~~ 245 (340)
T 3gms_A 207 ELTNGIGADAAIDSIGG------PD-GNELAFSLRPNGHFLTIGLL 245 (340)
T ss_dssp HHTTTSCEEEEEESSCH------HH-HHHHHHTEEEEEEEEECCCT
T ss_pred HHhCCCCCcEEEECCCC------hh-HHHHHHHhcCCCEEEEEeec
Confidence 123479999864331 12 23344789999999876543
No 323
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.92 E-value=0.039 Score=45.00 Aligned_cols=100 Identities=16% Similarity=0.244 Sum_probs=66.6
Q ss_pred hhhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCc-eEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccC---CCC--
Q 025144 63 SWSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDA---LDL-- 135 (257)
Q Consensus 63 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~---~~~-- 135 (257)
...+..++.+||-+|+|. |..+..+++.. +. +|+++|.+++-++.+++.- --.++..+. .+.
T Consensus 165 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~lG---------a~~vi~~~~~~~~~~~~ 233 (356)
T 1pl8_A 165 RRGGVTLGHKVLVCGAGPIGMVTLLVAKAM--GAAQVVVTDLSATRLSKAKEIG---------ADLVLQISKESPQEIAR 233 (356)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTT---------CSEEEECSSCCHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHhC---------CCEEEcCcccccchHHH
Confidence 345778899999999875 78888888875 56 8999999998888776431 112222220 010
Q ss_pred ---CCCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 136 ---PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 136 ---~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
....+.+|+|+-.-. ....+....+.|+++|.++....
T Consensus 234 ~i~~~~~~g~D~vid~~g------~~~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 234 KVEGQLGCKPEVTIECTG------AEASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp HHHHHHTSCCSEEEECSC------CHHHHHHHHHHSCTTCEEEECSC
T ss_pred HHHHHhCCCCCEEEECCC------ChHHHHHHHHHhcCCCEEEEEec
Confidence 000146999985332 23457788899999999987654
No 324
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.87 E-value=0.1 Score=42.53 Aligned_cols=102 Identities=17% Similarity=0.223 Sum_probs=69.4
Q ss_pred hhhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCce-EEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCC---CC--
Q 025144 63 SWSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQGK-VIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDAL---DL-- 135 (257)
Q Consensus 63 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~-v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~---~~-- 135 (257)
...+..++.+||-+|+|. |..+..+++.. +.+ |+++|.+++-++.+++. . ..+.....+.. ++
T Consensus 173 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~l-~-------~~~~~~~~~~~~~~~~~~ 242 (363)
T 3m6i_A 173 QRAGVRLGDPVLICGAGPIGLITMLCAKAA--GACPLVITDIDEGRLKFAKEI-C-------PEVVTHKVERLSAEESAK 242 (363)
T ss_dssp HHHTCCTTCCEEEECCSHHHHHHHHHHHHT--TCCSEEEEESCHHHHHHHHHH-C-------TTCEEEECCSCCHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHh-c-------hhcccccccccchHHHHH
Confidence 456778899999999875 78888888885 565 99999999988888765 2 22222222211 00
Q ss_pred ----CCCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeec
Q 025144 136 ----PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 136 ----~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
......+|+|+-.-. ....+....+.|+++|.+++....
T Consensus 243 ~v~~~t~g~g~Dvvid~~g------~~~~~~~~~~~l~~~G~iv~~G~~ 285 (363)
T 3m6i_A 243 KIVESFGGIEPAVALECTG------VESSIAAAIWAVKFGGKVFVIGVG 285 (363)
T ss_dssp HHHHHTSSCCCSEEEECSC------CHHHHHHHHHHSCTTCEEEECCCC
T ss_pred HHHHHhCCCCCCEEEECCC------ChHHHHHHHHHhcCCCEEEEEccC
Confidence 012356999985332 234677888999999999876543
No 325
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.83 E-value=0.095 Score=42.59 Aligned_cols=100 Identities=16% Similarity=0.203 Sum_probs=66.6
Q ss_pred hhhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccC-CCCC----
Q 025144 63 SWSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDA-LDLP---- 136 (257)
Q Consensus 63 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~-~~~~---- 136 (257)
...+..++.+||-+|+|. |..+..+++.. +.+|+++|.+++-++.+++. + -. .++..+- .+..
T Consensus 162 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~l----G----a~-~~~~~~~~~~~~~~i~ 230 (352)
T 1e3j_A 162 RRAGVQLGTTVLVIGAGPIGLVSVLAAKAY--GAFVVCTARSPRRLEVAKNC----G----AD-VTLVVDPAKEEESSII 230 (352)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHT----T----CS-EEEECCTTTSCHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHHh----C----CC-EEEcCcccccHHHHHH
Confidence 345778899999999875 77888888874 56799999999888877643 1 11 2222221 1110
Q ss_pred --CC---CCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 137 --FS---DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 137 --~~---~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
.. .+.+|+|+-... ....+....+.|+++|.++....
T Consensus 231 ~~~~~~~g~g~D~vid~~g------~~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 231 ERIRSAIGDLPNVTIDCSG------NEKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp HHHHHHSSSCCSEEEECSC------CHHHHHHHHHHSCTTCEEEECSC
T ss_pred HHhccccCCCCCEEEECCC------CHHHHHHHHHHHhcCCEEEEEec
Confidence 11 246999985432 13457788889999999977643
No 326
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.83 E-value=0.027 Score=45.83 Aligned_cols=100 Identities=17% Similarity=0.257 Sum_probs=67.2
Q ss_pred hhhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCc-eEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC----
Q 025144 63 SWSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP---- 136 (257)
Q Consensus 63 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~---- 136 (257)
...++.++.+||-+|+|. |..+..+++.. +. +|+++|.+++-++.+++.- --.++..+-.++.
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~~Vi~~~~~~~~~~~~~~lG---------a~~vi~~~~~~~~~~v~ 228 (352)
T 3fpc_A 160 ELANIKLGDTVCVIGIGPVGLMSVAGANHL--GAGRIFAVGSRKHCCDIALEYG---------ATDIINYKNGDIVEQIL 228 (352)
T ss_dssp HHTTCCTTCCEEEECCSHHHHHHHHHHHTT--TCSSEEEECCCHHHHHHHHHHT---------CCEEECGGGSCHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc--CCcEEEEECCCHHHHHHHHHhC---------CceEEcCCCcCHHHHHH
Confidence 456778899999999875 77888888874 55 8999999998888776541 1122222211110
Q ss_pred --CCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 137 --FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 137 --~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
.....+|+|+-...- ...+....+.|+++|.++....
T Consensus 229 ~~t~g~g~D~v~d~~g~------~~~~~~~~~~l~~~G~~v~~G~ 267 (352)
T 3fpc_A 229 KATDGKGVDKVVIAGGD------VHTFAQAVKMIKPGSDIGNVNY 267 (352)
T ss_dssp HHTTTCCEEEEEECSSC------TTHHHHHHHHEEEEEEEEECCC
T ss_pred HHcCCCCCCEEEECCCC------hHHHHHHHHHHhcCCEEEEecc
Confidence 123469999853321 2457778889999999987643
No 327
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=95.80 E-value=0.045 Score=44.20 Aligned_cols=99 Identities=13% Similarity=0.087 Sum_probs=66.3
Q ss_pred hhhCCCCCCeEEEecC--CCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC----
Q 025144 63 SWSGAKTGDNVLDVCC--GSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP---- 136 (257)
Q Consensus 63 ~~~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~---- 136 (257)
...++.++.+||-.|+ |.|..+..+++.. +.+|+++|.+++-++.+.+.+ .--.++...-.+..
T Consensus 143 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~~--------g~~~~~~~~~~~~~~~~~ 212 (336)
T 4b7c_A 143 DVGQPKNGETVVISGAAGAVGSVAGQIARLK--GCRVVGIAGGAEKCRFLVEEL--------GFDGAIDYKNEDLAAGLK 212 (336)
T ss_dssp HTTCCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTT--------CCSEEEETTTSCHHHHHH
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHc--------CCCEEEECCCHHHHHHHH
Confidence 4557788999999998 4577888888774 679999999998877773332 11122222111110
Q ss_pred -CCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEe
Q 025144 137 -FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 137 -~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
...+.+|+|+.+.. ...+....+.|+++|.+++..
T Consensus 213 ~~~~~~~d~vi~~~g-------~~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 213 RECPKGIDVFFDNVG-------GEILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp HHCTTCEEEEEESSC-------HHHHHHHHTTEEEEEEEEECC
T ss_pred HhcCCCceEEEECCC-------cchHHHHHHHHhhCCEEEEEe
Confidence 11346999986443 246788889999999987754
No 328
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.75 E-value=0.073 Score=43.75 Aligned_cols=100 Identities=15% Similarity=0.171 Sum_probs=67.9
Q ss_pred hhhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCc-eEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEcc--CCCC---
Q 025144 63 SWSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGD--ALDL--- 135 (257)
Q Consensus 63 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d--~~~~--- 135 (257)
......++.+||-+|+|. |..+..+++.. +. +|+++|.+++-++.+++.- --.++... -.++
T Consensus 187 ~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~--Ga~~Vi~~~~~~~~~~~a~~lG---------a~~vi~~~~~~~~~~~~ 255 (378)
T 3uko_A 187 NTAKVEPGSNVAIFGLGTVGLAVAEGAKTA--GASRIIGIDIDSKKYETAKKFG---------VNEFVNPKDHDKPIQEV 255 (378)
T ss_dssp TTTCCCTTCCEEEECCSHHHHHHHHHHHHH--TCSCEEEECSCTTHHHHHHTTT---------CCEEECGGGCSSCHHHH
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCCHHHHHHHHHcC---------CcEEEccccCchhHHHH
Confidence 445778899999999974 88888888886 45 8999999999888776531 11222221 1111
Q ss_pred --CCCCCcccEEEecccccCcccHHHHHHHHHhcccCC-CEEEEEee
Q 025144 136 --PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPG-SRISVLDF 179 (257)
Q Consensus 136 --~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~ 179 (257)
...++.+|+|+-.-. ....+....+.|++| |.+++...
T Consensus 256 i~~~~~gg~D~vid~~g------~~~~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 256 IVDLTDGGVDYSFECIG------NVSVMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp HHHHTTSCBSEEEECSC------CHHHHHHHHHTBCTTTCEEEECSC
T ss_pred HHHhcCCCCCEEEECCC------CHHHHHHHHHHhhccCCEEEEEcc
Confidence 012347999985332 245678888999996 99887654
No 329
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.74 E-value=0.075 Score=43.58 Aligned_cols=101 Identities=22% Similarity=0.205 Sum_probs=68.5
Q ss_pred hhhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCc-eEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC-----
Q 025144 63 SWSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL----- 135 (257)
Q Consensus 63 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~----- 135 (257)
...++.++.+||-+|+|. |..+..+++.. +. +|+++|.+++-++.+++.- --.++...-.++
T Consensus 176 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~lG---------a~~vi~~~~~~~~~~i~ 244 (370)
T 4ej6_A 176 DLSGIKAGSTVAILGGGVIGLLTVQLARLA--GATTVILSTRQATKRRLAEEVG---------ATATVDPSAGDVVEAIA 244 (370)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCHHHHHHHHHHT---------CSEEECTTSSCHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHcC---------CCEEECCCCcCHHHHHH
Confidence 456778899999999875 78888888875 55 8999999998888776531 112222111111
Q ss_pred C---CCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeec
Q 025144 136 P---FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 136 ~---~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
. ..++.+|+|+-.-. ....+....+.|+++|.+++....
T Consensus 245 ~~~~~~~gg~Dvvid~~G------~~~~~~~~~~~l~~~G~vv~~G~~ 286 (370)
T 4ej6_A 245 GPVGLVPGGVDVVIECAG------VAETVKQSTRLAKAGGTVVILGVL 286 (370)
T ss_dssp STTSSSTTCEEEEEECSC------CHHHHHHHHHHEEEEEEEEECSCC
T ss_pred hhhhccCCCCCEEEECCC------CHHHHHHHHHHhccCCEEEEEecc
Confidence 0 22347999985322 245678888999999999876543
No 330
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.61 E-value=0.064 Score=43.84 Aligned_cols=100 Identities=21% Similarity=0.165 Sum_probs=67.1
Q ss_pred hhhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-----
Q 025144 63 SWSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----- 136 (257)
Q Consensus 63 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~----- 136 (257)
...+..++.+||-+|+|. |..+..+++.. +.+|+++|.+++-++.+++. + --.++..+..++.
T Consensus 183 ~~~~~~~g~~VlV~G~G~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~l----G-----a~~vi~~~~~~~~~~v~~ 251 (363)
T 3uog_A 183 EKGHLRAGDRVVVQGTGGVALFGLQIAKAT--GAEVIVTSSSREKLDRAFAL----G-----ADHGINRLEEDWVERVYA 251 (363)
T ss_dssp TTTCCCTTCEEEEESSBHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHH----T-----CSEEEETTTSCHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEecCchhHHHHHHc----C-----CCEEEcCCcccHHHHHHH
Confidence 345678899999999875 78888888874 67999999999888877553 1 1223332211210
Q ss_pred -CCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeec
Q 025144 137 -FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 137 -~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
.....+|+|+-...- ..+....+.|+++|.+++....
T Consensus 252 ~~~g~g~D~vid~~g~-------~~~~~~~~~l~~~G~iv~~G~~ 289 (363)
T 3uog_A 252 LTGDRGADHILEIAGG-------AGLGQSLKAVAPDGRISVIGVL 289 (363)
T ss_dssp HHTTCCEEEEEEETTS-------SCHHHHHHHEEEEEEEEEECCC
T ss_pred HhCCCCceEEEECCCh-------HHHHHHHHHhhcCCEEEEEecC
Confidence 123469999864431 2356677889999999876543
No 331
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.61 E-value=0.11 Score=42.51 Aligned_cols=100 Identities=13% Similarity=0.134 Sum_probs=66.7
Q ss_pred hhhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCc-eEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccC--CCC---
Q 025144 63 SWSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDA--LDL--- 135 (257)
Q Consensus 63 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~--~~~--- 135 (257)
...++.++.+||-+|+|. |..+..+++.. +. +|+++|.+++-++.+++. + --.++..+- .++
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~l----G-----a~~vi~~~~~~~~~~~~ 253 (373)
T 1p0f_A 185 NTAKVTPGSTCAVFGLGGVGFSAIVGCKAA--GASRIIGVGTHKDKFPKAIEL----G-----ATECLNPKDYDKPIYEV 253 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHH--TCSEEEEECSCGGGHHHHHHT----T-----CSEEECGGGCSSCHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEECCCHHHHHHHHHc----C-----CcEEEecccccchHHHH
Confidence 345678899999999875 77888888875 45 799999999888887643 1 112222111 111
Q ss_pred --CCCCCcccEEEecccccCcccHHHHHHHHHhcccCC-CEEEEEee
Q 025144 136 --PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPG-SRISVLDF 179 (257)
Q Consensus 136 --~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~ 179 (257)
...++.+|+|+-.-. ....+....+.|+++ |.++....
T Consensus 254 i~~~t~gg~Dvvid~~g------~~~~~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 254 ICEKTNGGVDYAVECAG------RIETMMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp HHHHTTSCBSEEEECSC------CHHHHHHHHHTBCTTTCEEEECCC
T ss_pred HHHHhCCCCCEEEECCC------CHHHHHHHHHHHhcCCCEEEEEcc
Confidence 011247999985332 135678888999999 99877543
No 332
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.59 E-value=0.12 Score=42.42 Aligned_cols=100 Identities=15% Similarity=0.183 Sum_probs=66.6
Q ss_pred hhhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCc-eEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccC--CCC---
Q 025144 63 SWSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDA--LDL--- 135 (257)
Q Consensus 63 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~--~~~--- 135 (257)
...+..++.+||-+|+|. |..+..+++.. +. +|+++|.+++-++.+++. + --.++..+- .++
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~avqla~~~--Ga~~Vi~~~~~~~~~~~~~~l----G-----a~~vi~~~~~~~~~~~~ 252 (373)
T 2fzw_A 184 NTAKLEPGSVCAVFGLGGVGLAVIMGCKVA--GASRIIGVDINKDKFARAKEF----G-----ATECINPQDFSKPIQEV 252 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHH--TCSEEEEECSCGGGHHHHHHH----T-----CSEEECGGGCSSCHHHH
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCCHHHHHHHHHc----C-----CceEeccccccccHHHH
Confidence 345678889999999875 77888888875 45 799999999888887643 1 112222111 111
Q ss_pred --CCCCCcccEEEecccccCcccHHHHHHHHHhcccCC-CEEEEEee
Q 025144 136 --PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPG-SRISVLDF 179 (257)
Q Consensus 136 --~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~ 179 (257)
...++.+|+|+-.-. ....+....+.|+++ |.++....
T Consensus 253 v~~~~~~g~D~vid~~g------~~~~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 253 LIEMTDGGVDYSFECIG------NVKVMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp HHHHTTSCBSEEEECSC------CHHHHHHHHHTBCTTTCEEEECSC
T ss_pred HHHHhCCCCCEEEECCC------cHHHHHHHHHhhccCCcEEEEEec
Confidence 011246999985432 135678888999999 99877643
No 333
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=95.50 E-value=0.071 Score=42.94 Aligned_cols=96 Identities=17% Similarity=0.139 Sum_probs=63.7
Q ss_pred hhhCCCCCCeEEEecC--CCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCC-CC---
Q 025144 63 SWSGAKTGDNVLDVCC--GSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD-LP--- 136 (257)
Q Consensus 63 ~~~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~-~~--- 136 (257)
...+..++.+||-.|+ |.|..+..++... +.+|+++|.+++.++.+++. + .. ..+ |..+ ..
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~~~~----g----~~-~~~--d~~~~~~~~~ 205 (333)
T 1v3u_A 139 EVCGVKGGETVLVSAAAGAVGSVVGQIAKLK--GCKVVGAAGSDEKIAYLKQI----G----FD-AAF--NYKTVNSLEE 205 (333)
T ss_dssp TTSCCCSSCEEEEESTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHT----T----CS-EEE--ETTSCSCHHH
T ss_pred HhhCCCCCCEEEEecCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhc----C----Cc-EEE--ecCCHHHHHH
Confidence 3456778899999997 4577777777763 67999999998887777332 1 11 112 2222 10
Q ss_pred ----CCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEe
Q 025144 137 ----FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 137 ----~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
...+.+|+++.+.. ...+....+.|+++|.+++..
T Consensus 206 ~~~~~~~~~~d~vi~~~g-------~~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 206 ALKKASPDGYDCYFDNVG-------GEFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp HHHHHCTTCEEEEEESSC-------HHHHHHHHTTEEEEEEEEECC
T ss_pred HHHHHhCCCCeEEEECCC-------hHHHHHHHHHHhcCCEEEEEe
Confidence 11246999986554 134778889999999987754
No 334
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.48 E-value=0.1 Score=42.78 Aligned_cols=100 Identities=10% Similarity=0.159 Sum_probs=66.3
Q ss_pred hhhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCc-eEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccC--CCCC--
Q 025144 63 SWSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDA--LDLP-- 136 (257)
Q Consensus 63 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~--~~~~-- 136 (257)
...+..++.+||-+|+|. |..+..+++.. +. +|+++|.+++-++.+++.- --.++..+- .++.
T Consensus 186 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~~Vi~~~~~~~~~~~~~~lG---------a~~vi~~~~~~~~~~~~ 254 (374)
T 1cdo_A 186 NTAKVEPGSTCAVFGLGAVGLAAVMGCHSA--GAKRIIAVDLNPDKFEKAKVFG---------ATDFVNPNDHSEPISQV 254 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHHTT---------CCEEECGGGCSSCHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEEcCCHHHHHHHHHhC---------CceEEeccccchhHHHH
Confidence 345678889999999875 77888888874 55 7999999998888876431 112222111 1110
Q ss_pred ---CCCCcccEEEecccccCcccHHHHHHHHHhcccCC-CEEEEEee
Q 025144 137 ---FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPG-SRISVLDF 179 (257)
Q Consensus 137 ---~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~ 179 (257)
...+.+|+|+-.-. ....+....+.|+++ |.+++...
T Consensus 255 ~~~~~~~g~D~vid~~g------~~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 255 LSKMTNGGVDFSLECVG------NVGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp HHHHHTSCBSEEEECSC------CHHHHHHHHHTBCTTTCEEEECSC
T ss_pred HHHHhCCCCCEEEECCC------CHHHHHHHHHHhhcCCcEEEEEcC
Confidence 11236999985332 135678888999999 99877643
No 335
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=95.47 E-value=0.045 Score=45.61 Aligned_cols=47 Identities=15% Similarity=0.138 Sum_probs=36.6
Q ss_pred CCeEEEecCCCChhHHHHHHHhC---C-CceEEEEeCChhHHHHHHhhhhh
Q 025144 70 GDNVLDVCCGSGDLSFLLSEQVG---S-QGKVIGLDFSKNQLSMASSRQDL 116 (257)
Q Consensus 70 ~~~vLdiG~G~G~~~~~l~~~~~---~-~~~v~~~D~s~~~~~~a~~~~~~ 116 (257)
..+|+|+|+|+|.++..+++.+. + ..+|+.+|+|+.+.+.=++++..
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 46999999999999988876541 1 23899999999888776666643
No 336
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.46 E-value=0.13 Score=42.21 Aligned_cols=100 Identities=13% Similarity=0.155 Sum_probs=66.1
Q ss_pred hhhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCc-eEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccC--CCC---
Q 025144 63 SWSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDA--LDL--- 135 (257)
Q Consensus 63 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~--~~~--- 135 (257)
...+..++.+||-+|+|. |..+..+++.. +. +|+++|.+++-++.+++.- --.++..+- .++
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~~Vi~~~~~~~~~~~~~~lG---------a~~vi~~~~~~~~~~~~ 253 (374)
T 2jhf_A 185 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAA--GAARIIGVDINKDKFAKAKEVG---------ATECVNPQDYKKPIQEV 253 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHHTT---------CSEEECGGGCSSCHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCCHHHHHHHHHhC---------CceEecccccchhHHHH
Confidence 345678889999999875 77888888874 55 7999999998888776431 112222111 111
Q ss_pred --CCCCCcccEEEecccccCcccHHHHHHHHHhcccCC-CEEEEEee
Q 025144 136 --PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPG-SRISVLDF 179 (257)
Q Consensus 136 --~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~ 179 (257)
...++.+|+|+-.-. ....+....+.|+++ |.+++...
T Consensus 254 ~~~~~~~g~D~vid~~g------~~~~~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 254 LTEMSNGGVDFSFEVIG------RLDTMVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp HHHHTTSCBSEEEECSC------CHHHHHHHHHHBCTTTCEEEECSC
T ss_pred HHHHhCCCCcEEEECCC------CHHHHHHHHHHhhcCCcEEEEecc
Confidence 011246999985332 135677888999999 99877543
No 337
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.38 E-value=0.024 Score=45.08 Aligned_cols=56 Identities=20% Similarity=0.330 Sum_probs=40.6
Q ss_pred CCeeEEEccCCCC-C-CCCCcccEEEecccccCcc--------------------cHHHHHHHHHhcccCCCEEEEEe
Q 025144 123 KNIEWVEGDALDL-P-FSDCFFDAITMGYGLRNVV--------------------DKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 123 ~~~~~~~~d~~~~-~-~~~~~~D~v~~~~~l~~~~--------------------~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
.+..++++|..+. . +++++||+|+++....... ....+++.+.++|||||.+++..
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~ 97 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVV 97 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 4678999998762 2 5578999999987654221 12456789999999999987653
No 338
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=95.34 E-value=0.16 Score=42.12 Aligned_cols=99 Identities=14% Similarity=0.104 Sum_probs=63.0
Q ss_pred CCCCCCeEEEecCCC-ChhHHHHHHHhCCCc-eEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC------C
Q 025144 66 GAKTGDNVLDVCCGS-GDLSFLLSEQVGSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP------F 137 (257)
Q Consensus 66 ~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~------~ 137 (257)
.+.++.+||=+|+|. |..+..+++.. +. +|+++|.+++-++.+++.- --.++..+-.++. .
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~~~~lG---------a~~vi~~~~~~~~~~i~~~t 278 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHA--GASKVILSEPSEVRRNLAKELG---------ADHVIDPTKENFVEAVLDYT 278 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCHHHHHHHHHHT---------CSEEECTTTSCHHHHHHHHT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHcC---------CCEEEcCCCCCHHHHHHHHh
Confidence 577889999999875 77888888875 56 8999999998888776541 1122322212210 1
Q ss_pred CCCcccEEEecccccCcccHHHHHHHHHhcc----cCCCEEEEEeec
Q 025144 138 SDCFFDAITMGYGLRNVVDKRKALEESFRVL----KPGSRISVLDFN 180 (257)
Q Consensus 138 ~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L----k~gG~l~~~~~~ 180 (257)
....+|+|+-.-. .....+..+.+.| +++|.+++....
T Consensus 279 ~g~g~D~vid~~g-----~~~~~~~~~~~~l~~~~~~~G~iv~~G~~ 320 (404)
T 3ip1_A 279 NGLGAKLFLEATG-----VPQLVWPQIEEVIWRARGINATVAIVARA 320 (404)
T ss_dssp TTCCCSEEEECSS-----CHHHHHHHHHHHHHHCSCCCCEEEECSCC
T ss_pred CCCCCCEEEECCC-----CcHHHHHHHHHHHHhccCCCcEEEEeCCC
Confidence 2346999984322 2223444444455 999999876543
No 339
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=95.33 E-value=0.066 Score=43.01 Aligned_cols=99 Identities=17% Similarity=0.151 Sum_probs=66.1
Q ss_pred hhCCCCCCeEEEecC--CCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-----
Q 025144 64 WSGAKTGDNVLDVCC--GSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----- 136 (257)
Q Consensus 64 ~~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~----- 136 (257)
..+..++.+||-.|+ |.|..+..+++.. +.+|++++.+++-++.+++. ..-.++..+-.+..
T Consensus 135 ~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~---------Ga~~~~~~~~~~~~~~~~~ 203 (325)
T 3jyn_A 135 TYQVKPGEIILFHAAAGGVGSLACQWAKAL--GAKLIGTVSSPEKAAHAKAL---------GAWETIDYSHEDVAKRVLE 203 (325)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHHH---------TCSEEEETTTSCHHHHHHH
T ss_pred hcCCCCCCEEEEEcCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHc---------CCCEEEeCCCccHHHHHHH
Confidence 346788999999983 4578888888875 57999999999888877643 11122322222210
Q ss_pred -CCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeec
Q 025144 137 -FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 137 -~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
.....+|+|+-+..- ..+....+.|+++|.+++....
T Consensus 204 ~~~~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~g~~ 241 (325)
T 3jyn_A 204 LTDGKKCPVVYDGVGQ-------DTWLTSLDSVAPRGLVVSFGNA 241 (325)
T ss_dssp HTTTCCEEEEEESSCG-------GGHHHHHTTEEEEEEEEECCCT
T ss_pred HhCCCCceEEEECCCh-------HHHHHHHHHhcCCCEEEEEecC
Confidence 123469999864431 3466788899999999876543
No 340
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.28 E-value=0.089 Score=43.14 Aligned_cols=96 Identities=20% Similarity=0.215 Sum_probs=63.6
Q ss_pred hCCCCCCeEEEecCCC-ChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCC-C-CCCCCc
Q 025144 65 SGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD-L-PFSDCF 141 (257)
Q Consensus 65 ~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~-~-~~~~~~ 141 (257)
.+..++.+||-+|+|. |..+..+++.. +.+|+++|.+++-++.+++. + --.++...-.+ . ... +.
T Consensus 190 ~~~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~Vi~~~~~~~~~~~a~~l----G-----a~~vi~~~~~~~~~~~~-~g 257 (369)
T 1uuf_A 190 WQAGPGKKVGVVGIGGLGHMGIKLAHAM--GAHVVAFTTSEAKREAAKAL----G-----ADEVVNSRNADEMAAHL-KS 257 (369)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHH----T-----CSEEEETTCHHHHHTTT-TC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHc----C-----CcEEeccccHHHHHHhh-cC
Confidence 4678899999999975 77888888874 67899999999888887652 1 11222211100 0 111 46
Q ss_pred ccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEe
Q 025144 142 FDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 142 ~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
+|+|+-.-.-. ..+....+.|+++|.++...
T Consensus 258 ~Dvvid~~g~~------~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 258 FDFILNTVAAP------HNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp EEEEEECCSSC------CCHHHHHTTEEEEEEEEECC
T ss_pred CCEEEECCCCH------HHHHHHHHHhccCCEEEEec
Confidence 99998543321 23566778999999987654
No 341
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=95.24 E-value=0.041 Score=44.01 Aligned_cols=93 Identities=14% Similarity=0.038 Sum_probs=62.4
Q ss_pred hhhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCc
Q 025144 63 SWSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCF 141 (257)
Q Consensus 63 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 141 (257)
...+..++.+||-+|+|. |..+..+++.. +.+|++++ +++-++.+++. + --.++. |...+ .+.
T Consensus 136 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~--Ga~Vi~~~-~~~~~~~~~~l----G-----a~~v~~-d~~~v---~~g 199 (315)
T 3goh_A 136 EKIPLTKQREVLIVGFGAVNNLLTQMLNNA--GYVVDLVS-ASLSQALAAKR----G-----VRHLYR-EPSQV---TQK 199 (315)
T ss_dssp TTSCCCSCCEEEEECCSHHHHHHHHHHHHH--TCEEEEEC-SSCCHHHHHHH----T-----EEEEES-SGGGC---CSC
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEE-ChhhHHHHHHc----C-----CCEEEc-CHHHh---CCC
Confidence 456778899999999964 88888888886 56999999 88888877653 1 112222 32222 467
Q ss_pred ccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEe
Q 025144 142 FDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 142 ~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
+|+|+-.-.- ..+....+.|+++|.++...
T Consensus 200 ~Dvv~d~~g~-------~~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 200 YFAIFDAVNS-------QNAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp EEEEECC--------------TTGGGEEEEEEEEEEC
T ss_pred ccEEEECCCc-------hhHHHHHHHhcCCCEEEEEe
Confidence 9999843221 12356778999999987763
No 342
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.21 E-value=0.13 Score=42.11 Aligned_cols=100 Identities=11% Similarity=0.118 Sum_probs=66.2
Q ss_pred hhhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCc-eEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccC--CCCC--
Q 025144 63 SWSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDA--LDLP-- 136 (257)
Q Consensus 63 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~--~~~~-- 136 (257)
...+..++.+||-+|+|. |..+..+++.. +. +|+++|.+++-++.+++.- --.++..+- .++.
T Consensus 189 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~lG---------a~~vi~~~~~~~~~~~~ 257 (376)
T 1e3i_A 189 NTAKVTPGSTCAVFGLGCVGLSAIIGCKIA--GASRIIAIDINGEKFPKAKALG---------ATDCLNPRELDKPVQDV 257 (376)
T ss_dssp TTSCCCTTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHHTT---------CSEEECGGGCSSCHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCCHHHHHHHHHhC---------CcEEEccccccchHHHH
Confidence 345678889999999874 77888888875 55 7999999998888776431 112222111 1110
Q ss_pred ---CCCCcccEEEecccccCcccHHHHHHHHHhcccCC-CEEEEEee
Q 025144 137 ---FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPG-SRISVLDF 179 (257)
Q Consensus 137 ---~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~ 179 (257)
...+.+|+|+-.-. ....+....+.|+++ |.+++...
T Consensus 258 v~~~~~~g~Dvvid~~G------~~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 258 ITELTAGGVDYSLDCAG------TAQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp HHHHHTSCBSEEEESSC------CHHHHHHHHHTBCTTTCEEEECCC
T ss_pred HHHHhCCCccEEEECCC------CHHHHHHHHHHhhcCCCEEEEECC
Confidence 11236999985332 135678888999999 99877544
No 343
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=95.21 E-value=0.14 Score=41.84 Aligned_cols=98 Identities=19% Similarity=0.214 Sum_probs=65.7
Q ss_pred hhCCCCCCeEEEec--CCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-----
Q 025144 64 WSGAKTGDNVLDVC--CGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----- 136 (257)
Q Consensus 64 ~~~~~~~~~vLdiG--~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~----- 136 (257)
..+..++.+||-.| +|.|..+..+++.. +.+|++++.+++-++.+++. + --.++..+-.++.
T Consensus 158 ~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~~----G-----a~~~~~~~~~~~~~~~~~ 226 (362)
T 2c0c_A 158 LGGLSEGKKVLVTAAAGGTGQFAMQLSKKA--KCHVIGTCSSDEKSAFLKSL----G-----CDRPINYKTEPVGTVLKQ 226 (362)
T ss_dssp HTCCCTTCEEEETTTTBTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHT----T-----CSEEEETTTSCHHHHHHH
T ss_pred hcCCCCCCEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHc----C-----CcEEEecCChhHHHHHHH
Confidence 34678889999999 45688888888874 67899999998877777652 1 1122222211110
Q ss_pred CCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 137 FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 137 ~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
...+.+|+|+-... . ..+..+.+.|+++|.++....
T Consensus 227 ~~~~g~D~vid~~g-----~--~~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 227 EYPEGVDVVYESVG-----G--AMFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp HCTTCEEEEEECSC-----T--HHHHHHHHHEEEEEEEEECCC
T ss_pred hcCCCCCEEEECCC-----H--HHHHHHHHHHhcCCEEEEEeC
Confidence 11246999986543 1 467788899999999877543
No 344
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=95.18 E-value=0.072 Score=43.16 Aligned_cols=97 Identities=16% Similarity=0.181 Sum_probs=65.4
Q ss_pred hhhCCCCCCeEEEecC--CCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC----
Q 025144 63 SWSGAKTGDNVLDVCC--GSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP---- 136 (257)
Q Consensus 63 ~~~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~---- 136 (257)
......++.+||-.|+ |.|..+..+++.. +.+|++++.+++-++.+++. + .-.++..+ .++.
T Consensus 153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~----g-----a~~v~~~~-~~~~~~v~ 220 (342)
T 4eye_A 153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKGM--GAKVIAVVNRTAATEFVKSV----G-----ADIVLPLE-EGWAKAVR 220 (342)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHH----T-----CSEEEESS-TTHHHHHH
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhc----C-----CcEEecCc-hhHHHHHH
Confidence 4456788999999997 4578888888874 67999999999888777653 1 12233333 2211
Q ss_pred --CCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEe
Q 025144 137 --FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 137 --~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
.....+|+|+-...- ..+....+.|+++|.+++..
T Consensus 221 ~~~~~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 221 EATGGAGVDMVVDPIGG-------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp HHTTTSCEEEEEESCC---------CHHHHHHTEEEEEEEEEC-
T ss_pred HHhCCCCceEEEECCch-------hHHHHHHHhhcCCCEEEEEE
Confidence 123369999864432 24667888999999987754
No 345
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=95.12 E-value=0.077 Score=42.78 Aligned_cols=96 Identities=20% Similarity=0.144 Sum_probs=64.4
Q ss_pred hCCCCCCeEEEecC--CCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC------
Q 025144 65 SGAKTGDNVLDVCC--GSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP------ 136 (257)
Q Consensus 65 ~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~------ 136 (257)
.+..++.+||-.|+ |.|..+..+++.. +.+|++++.+++-++.+++. ..-.++..+-.+..
T Consensus 144 ~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~---------ga~~~~~~~~~~~~~~~~~~ 212 (334)
T 3qwb_A 144 YHVKKGDYVLLFAAAGGVGLILNQLLKMK--GAHTIAVASTDEKLKIAKEY---------GAEYLINASKEDILRQVLKF 212 (334)
T ss_dssp SCCCTTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHT---------TCSEEEETTTSCHHHHHHHH
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHc---------CCcEEEeCCCchHHHHHHHH
Confidence 46788999999994 4577888888874 67999999999888776553 11122322222210
Q ss_pred CCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEe
Q 025144 137 FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 137 ~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
.....+|+|+-+..- ..+....+.|+++|.++...
T Consensus 213 ~~~~g~D~vid~~g~-------~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 213 TNGKGVDASFDSVGK-------DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp TTTSCEEEEEECCGG-------GGHHHHHHHEEEEEEEEECC
T ss_pred hCCCCceEEEECCCh-------HHHHHHHHHhccCCEEEEEc
Confidence 123469999864431 34667788999999987754
No 346
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=95.06 E-value=0.13 Score=41.68 Aligned_cols=99 Identities=19% Similarity=0.151 Sum_probs=65.1
Q ss_pred hhhCCCCCCeEEEecC--CCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccC-CCCC---
Q 025144 63 SWSGAKTGDNVLDVCC--GSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDA-LDLP--- 136 (257)
Q Consensus 63 ~~~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~-~~~~--- 136 (257)
...+..++.+||-.|+ |.|..+..+++.. +.+|+++|.+++.++.+++.+ + .-.++...- .++.
T Consensus 149 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~~~---g-----~~~~~d~~~~~~~~~~~ 218 (345)
T 2j3h_A 149 EVCSPKEGETVYVSAASGAVGQLVGQLAKMM--GCYVVGSAGSKEKVDLLKTKF---G-----FDDAFNYKEESDLTAAL 218 (345)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTS---C-----CSEEEETTSCSCSHHHH
T ss_pred HHhCCCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHc---C-----CceEEecCCHHHHHHHH
Confidence 3456778899999997 4677778887774 579999999988877776332 1 111222111 1110
Q ss_pred --CCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEe
Q 025144 137 --FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 137 --~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
...+.+|+|+.+.. ...+....+.|+++|.+++..
T Consensus 219 ~~~~~~~~d~vi~~~g-------~~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 219 KRCFPNGIDIYFENVG-------GKMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp HHHCTTCEEEEEESSC-------HHHHHHHHTTEEEEEEEEECC
T ss_pred HHHhCCCCcEEEECCC-------HHHHHHHHHHHhcCCEEEEEc
Confidence 11246999986543 136788889999999987754
No 347
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=95.00 E-value=0.51 Score=38.05 Aligned_cols=104 Identities=17% Similarity=0.249 Sum_probs=66.9
Q ss_pred HhhhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC----
Q 025144 62 VSWSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP---- 136 (257)
Q Consensus 62 ~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~---- 136 (257)
.......++.+||=.|+|. |..+..+++..+ ...++++|.+++-++.+++. .-..++..+-.+..
T Consensus 153 ~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G-~~~vi~~~~~~~k~~~a~~l---------Ga~~~i~~~~~~~~~~~~ 222 (346)
T 4a2c_A 153 FHLAQGCENKNVIIIGAGTIGLLAIQCAVALG-AKSVTAIDISSEKLALAKSF---------GAMQTFNSSEMSAPQMQS 222 (346)
T ss_dssp HHHTTCCTTSEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHHHT---------TCSEEEETTTSCHHHHHH
T ss_pred HHHhccCCCCEEEEECCCCcchHHHHHHHHcC-CcEEEEEechHHHHHHHHHc---------CCeEEEeCCCCCHHHHHH
Confidence 3445678889999999975 667777777752 23678999999888877654 12233332222211
Q ss_pred --CCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeecC
Q 025144 137 --FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFNK 181 (257)
Q Consensus 137 --~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 181 (257)
.....+|+|+-.-. ....+....+.++++|.+++.....
T Consensus 223 ~~~~~~g~d~v~d~~G------~~~~~~~~~~~l~~~G~~v~~g~~~ 263 (346)
T 4a2c_A 223 VLRELRFNQLILETAG------VPQTVELAVEIAGPHAQLALVGTLH 263 (346)
T ss_dssp HHGGGCSSEEEEECSC------SHHHHHHHHHHCCTTCEEEECCCCS
T ss_pred hhcccCCccccccccc------ccchhhhhhheecCCeEEEEEeccC
Confidence 11245788774321 2456778889999999998765443
No 348
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.97 E-value=0.13 Score=41.67 Aligned_cols=98 Identities=21% Similarity=0.190 Sum_probs=64.3
Q ss_pred hhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCc-eEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-----
Q 025144 64 WSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----- 136 (257)
Q Consensus 64 ~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~----- 136 (257)
..+. ++.+||-+|+|. |..+..+++.. +. +|+++|.+++-++.+++. + --.++..+-.++.
T Consensus 163 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~--Ga~~Vi~~~~~~~~~~~~~~~----G-----a~~~~~~~~~~~~~~v~~ 230 (348)
T 2d8a_A 163 AGPI-SGKSVLITGAGPLGLLGIAVAKAS--GAYPVIVSEPSDFRRELAKKV----G-----ADYVINPFEEDVVKEVMD 230 (348)
T ss_dssp TSCC-TTCCEEEECCSHHHHHHHHHHHHT--TCCSEEEECSCHHHHHHHHHH----T-----CSEEECTTTSCHHHHHHH
T ss_pred hcCC-CCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHh----C-----CCEEECCCCcCHHHHHHH
Confidence 3466 888999999964 77788888774 56 899999998887777643 1 1112222111110
Q ss_pred -CCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 137 -FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 137 -~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
.....+|+|+-... ....+....+.|+++|.++....
T Consensus 231 ~~~g~g~D~vid~~g------~~~~~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 231 ITDGNGVDVFLEFSG------APKALEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp HTTTSCEEEEEECSC------CHHHHHHHHHHEEEEEEEEECCC
T ss_pred HcCCCCCCEEEECCC------CHHHHHHHHHHHhcCCEEEEEcc
Confidence 11236999985432 23567788899999999877543
No 349
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.96 E-value=0.89 Score=40.60 Aligned_cols=159 Identities=14% Similarity=0.175 Sum_probs=90.8
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-------CCCceEEEEeCChhHHHHHHhhhhhhhh-------------c--------
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQV-------GSQGKVIGLDFSKNQLSMASSRQDLVSK-------------A-------- 120 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~-------~~~~~v~~~D~s~~~~~~a~~~~~~~~~-------------~-------- 120 (257)
+...|+-+|||.=.....|.... .++..++=+|. |+.++.-++.+...+. .
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~-p~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~ 185 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDY-SDLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFL 185 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEEC-HHHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCE
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECcc-HHHHHHHHHHHHcChHHHHhhccccccccccccccccc
Confidence 45689999999866665554331 11345566665 4454444444432110 0
Q ss_pred cCCCeeEEEccCCCCC----------C-CCCcccEEEecccccCcc--cHHHHHHHHHhcccCCCEEEEEeecCCC---c
Q 025144 121 CYKNIEWVEGDALDLP----------F-SDCFFDAITMGYGLRNVV--DKRKALEESFRVLKPGSRISVLDFNKST---Q 184 (257)
Q Consensus 121 ~~~~~~~~~~d~~~~~----------~-~~~~~D~v~~~~~l~~~~--~~~~~l~~~~~~Lk~gG~l~~~~~~~~~---~ 184 (257)
...+..++..|+.+.. + ..+..-++++-.++.+++ +..++|+.+.+. ++|.+++.+...+. .
T Consensus 186 ~s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~~--~~~~~~~~e~~~~~~~~d 263 (695)
T 2zwa_A 186 TTPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSKM--ENSHFIILEQLIPKGPFE 263 (695)
T ss_dssp ECSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHTS--SSEEEEEEEECCTTCTTS
T ss_pred cCCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhhC--CCceEEEEEeecCCCCCC
Confidence 0037889999998741 2 334455677778888885 467778888754 67777777755443 2
Q ss_pred hhHHHHHHHHHhhhhhhhhccCCchhhhhhhHHHHhccCCHHHHHHHHHHcCceeeEEeee
Q 025144 185 PFTTAIQEWMIDNVVVPVASGYGLAEEYQYLKSSIREFLTGKDLEKLALEIGFSRAKHYEL 245 (257)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 245 (257)
.+...+ ..+.. ....... ....+.+.++..+.|.++||+.+...++
T Consensus 264 ~f~~~m----~~~~~-~~g~~l~----------~~~~~~~~~~~~~~~~~~Gw~~v~~~~~ 309 (695)
T 2zwa_A 264 PFSKQM----LAHFK-RNDSPLQ----------SVLKYNTIESQVQRFNKLGFAYVNVGDM 309 (695)
T ss_dssp HHHHHH----HHHHH-HTTCCCC----------GGGTCCSHHHHHHHHHHTTCCEEEEEEH
T ss_pred hHHHHH----HHHHH-HcCCCCC----------ccccCCCHHHHHHHHHHCCCCCcceeeH
Confidence 222222 21110 0000100 1123557889999999999987665543
No 350
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=94.94 E-value=0.053 Score=43.84 Aligned_cols=75 Identities=16% Similarity=0.210 Sum_probs=56.2
Q ss_pred CeEEEecCCCChhHHHHHHHhCCC-ceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC---CCCCcccEEE
Q 025144 71 DNVLDVCCGSGDLSFLLSEQVGSQ-GKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP---FSDCFFDAIT 146 (257)
Q Consensus 71 ~~vLdiG~G~G~~~~~l~~~~~~~-~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~D~v~ 146 (257)
-+++|+-||.|.+..-+.+. +.+ ..+.++|+++...+.-+.+. +...++..|+.++. ++...+|+++
T Consensus 4 ~~~idLFaG~GG~~~G~~~a-G~~~~~v~a~e~d~~a~~ty~~N~--------~~~~~~~~DI~~~~~~~~~~~~~D~l~ 74 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKES-GLDGEIVAAVDINTVANSVYKHNF--------PETNLLNRNIQQLTPQVIKKWNVDTIL 74 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHH-TCSEEEEEEECCCHHHHHHHHHHC--------TTSCEECCCGGGCCHHHHHHTTCCEEE
T ss_pred CEEEEECcCccHHHHHHHHc-CCCceEEEEEeCCHHHHHHHHHhC--------CCCceeccccccCCHHHhccCCCCEEE
Confidence 37999999999999988766 322 35789999999888877776 45567788888764 2223589999
Q ss_pred ecccccCc
Q 025144 147 MGYGLRNV 154 (257)
Q Consensus 147 ~~~~l~~~ 154 (257)
.......+
T Consensus 75 ggpPCQ~f 82 (333)
T 4h0n_A 75 MSPPCQPF 82 (333)
T ss_dssp ECCCCCCS
T ss_pred ecCCCcch
Confidence 87766655
No 351
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=94.84 E-value=0.093 Score=42.56 Aligned_cols=99 Identities=16% Similarity=0.225 Sum_probs=64.6
Q ss_pred hCCCCCCeEEEecCC--CChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC-----CC
Q 025144 65 SGAKTGDNVLDVCCG--SGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-----PF 137 (257)
Q Consensus 65 ~~~~~~~~vLdiG~G--~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-----~~ 137 (257)
.+..++.+||-.|+| .|..+..+++.. .+.+|+++|.+++.++.+++. + .. .++...-.+. ..
T Consensus 166 ~~~~~g~~vlV~Gagg~iG~~~~~~a~~~-~Ga~Vi~~~~~~~~~~~~~~~----g----~~-~~~~~~~~~~~~~~~~~ 235 (347)
T 1jvb_A 166 ASLDPTKTLLVVGAGGGLGTMAVQIAKAV-SGATIIGVDVREEAVEAAKRA----G----AD-YVINASMQDPLAEIRRI 235 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHH-TCCEEEEEESSHHHHHHHHHH----T----CS-EEEETTTSCHHHHHHHH
T ss_pred cCCCCCCEEEEECCCccHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHh----C----CC-EEecCCCccHHHHHHHH
Confidence 567788999999998 466677777764 156899999999888777542 1 11 1222111111 01
Q ss_pred CC-CcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 138 SD-CFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 138 ~~-~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
.. +.+|+++.... ....+....+.|+++|.++....
T Consensus 236 ~~~~~~d~vi~~~g------~~~~~~~~~~~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 236 TESKGVDAVIDLNN------SEKTLSVYPKALAKQGKYVMVGL 272 (347)
T ss_dssp TTTSCEEEEEESCC------CHHHHTTGGGGEEEEEEEEECCS
T ss_pred hcCCCceEEEECCC------CHHHHHHHHHHHhcCCEEEEECC
Confidence 12 47999986443 23467788899999999877543
No 352
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=94.83 E-value=0.18 Score=40.80 Aligned_cols=97 Identities=22% Similarity=0.247 Sum_probs=64.0
Q ss_pred hCCCCCCeEEEecC--CCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC------
Q 025144 65 SGAKTGDNVLDVCC--GSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP------ 136 (257)
Q Consensus 65 ~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~------ 136 (257)
.++.++.+||-.|+ |.|..+..+++.. +.+++++|.+++.++.+++. + .. .++..+-.+..
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~~----g----a~-~~~d~~~~~~~~~~~~~ 230 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLF--GARVIATAGSEDKLRRAKAL----G----AD-ETVNYTHPDWPKEVRRL 230 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHH----T----CS-EEEETTSTTHHHHHHHH
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhc----C----CC-EEEcCCcccHHHHHHHH
Confidence 36678899999998 5688888888874 67999999999888777542 1 11 12222111110
Q ss_pred CCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 137 FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 137 ~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
.....+|+|+.... . ..+..+.+.|+++|.++....
T Consensus 231 ~~~~~~d~vi~~~g-~------~~~~~~~~~l~~~G~~v~~g~ 266 (343)
T 2eih_A 231 TGGKGADKVVDHTG-A------LYFEGVIKATANGGRIAIAGA 266 (343)
T ss_dssp TTTTCEEEEEESSC-S------SSHHHHHHHEEEEEEEEESSC
T ss_pred hCCCCceEEEECCC-H------HHHHHHHHhhccCCEEEEEec
Confidence 11246999986554 2 235677788999999876543
No 353
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=94.81 E-value=0.092 Score=42.58 Aligned_cols=96 Identities=17% Similarity=0.183 Sum_probs=64.1
Q ss_pred hCCCCCCeEEEecC--CCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCC---CCC---
Q 025144 65 SGAKTGDNVLDVCC--GSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDAL---DLP--- 136 (257)
Q Consensus 65 ~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~---~~~--- 136 (257)
.+..++.+||-.|+ |.|..+..+++.. +.+|+++|.+++.++.+++. + .. .++ |.. ++.
T Consensus 165 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~V~~~~~~~~~~~~~~~~----g----~~-~~~--d~~~~~~~~~~~ 231 (347)
T 2hcy_A 165 ANLMAGHWVAISGAAGGLGSLAVQYAKAM--GYRVLGIDGGEGKEELFRSI----G----GE-VFI--DFTKEKDIVGAV 231 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECSTTHHHHHHHT----T----CC-EEE--ETTTCSCHHHHH
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHC--CCcEEEEcCCHHHHHHHHHc----C----Cc-eEE--ecCccHhHHHHH
Confidence 36778899999998 4577777777764 57999999988877766542 1 11 122 322 110
Q ss_pred --CCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 137 --FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 137 --~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
..++.+|+|+.+.. ....++...+.|+++|.++....
T Consensus 232 ~~~~~~~~D~vi~~~g------~~~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 232 LKATDGGAHGVINVSV------SEAAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp HHHHTSCEEEEEECSS------CHHHHHHHTTSEEEEEEEEECCC
T ss_pred HHHhCCCCCEEEECCC------cHHHHHHHHHHHhcCCEEEEEeC
Confidence 01126899986543 23567888999999999877543
No 354
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=94.78 E-value=0.31 Score=40.06 Aligned_cols=81 Identities=11% Similarity=0.076 Sum_probs=50.3
Q ss_pred CCCCCCeEEEecCCCChhHHHHHHHhC------CCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCC
Q 025144 66 GAKTGDNVLDVCCGSGDLSFLLSEQVG------SQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSD 139 (257)
Q Consensus 66 ~~~~~~~vLdiG~G~G~~~~~l~~~~~------~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 139 (257)
..+..-+|+|+|+|.|.++..+++.+. ...+|+.+|+|+...+.=++++... .++... .++.+++ +
T Consensus 77 g~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~-----~~v~W~-~~l~~lp--~ 148 (387)
T 1zkd_A 77 DEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGI-----RNIHWH-DSFEDVP--E 148 (387)
T ss_dssp TCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTC-----SSEEEE-SSGGGSC--C
T ss_pred CCCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCC-----CCeEEe-CChhhcC--C
Confidence 344455899999999999998876542 2348999999998776555444321 234332 2333332 2
Q ss_pred CcccEEEecccccCcc
Q 025144 140 CFFDAITMGYGLRNVV 155 (257)
Q Consensus 140 ~~~D~v~~~~~l~~~~ 155 (257)
+ .=+|+++-++..++
T Consensus 149 ~-~~~viANE~fDAlP 163 (387)
T 1zkd_A 149 G-PAVILANEYFDVLP 163 (387)
T ss_dssp S-SEEEEEESSGGGSC
T ss_pred C-CeEEEeccccccCc
Confidence 2 34666666666554
No 355
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.78 E-value=0.11 Score=41.77 Aligned_cols=98 Identities=15% Similarity=0.096 Sum_probs=63.7
Q ss_pred hhCCCCCCeEEEecC--CCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-----
Q 025144 64 WSGAKTGDNVLDVCC--GSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----- 136 (257)
Q Consensus 64 ~~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~----- 136 (257)
..+..++.+||-.|+ |.|..+..+++.. +.+|+++|.+++.++.+++. + .. .++..+-.+..
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~~----g----~~-~~~~~~~~~~~~~~~~ 203 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLIACQWAKAL--GAKLIGTVGTAQKAQSALKA----G----AW-QVINYREEDLVERLKE 203 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHHH----T----CS-EEEETTTSCHHHHHHH
T ss_pred hhCCCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHc----C----CC-EEEECCCccHHHHHHH
Confidence 346778899999994 4577777777764 57999999998877777542 1 11 12221111110
Q ss_pred -CCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 137 -FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 137 -~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
.....+|+++.+.. ...++.+.+.|+++|.++....
T Consensus 204 ~~~~~~~D~vi~~~g-------~~~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 204 ITGGKKVRVVYDSVG-------RDTWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp HTTTCCEEEEEECSC-------GGGHHHHHHTEEEEEEEEECCC
T ss_pred HhCCCCceEEEECCc-------hHHHHHHHHHhcCCCEEEEEec
Confidence 11246999986554 2346778889999999877643
No 356
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.77 E-value=0.096 Score=42.13 Aligned_cols=47 Identities=17% Similarity=0.229 Sum_probs=40.6
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhh
Q 025144 67 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDL 116 (257)
Q Consensus 67 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~ 116 (257)
..++..|||.-||+|..+....+. +.+++++|+++...+.+++++..
T Consensus 250 ~~~~~~VlDpF~GsGtt~~aa~~~---gr~~ig~e~~~~~~~~~~~r~~~ 296 (323)
T 1boo_A 250 TEPDDLVVDIFGGSNTTGLVAERE---SRKWISFEMKPEYVAASAFRFLD 296 (323)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHGGGSC
T ss_pred CCCCCEEEECCCCCCHHHHHHHHc---CCCEEEEeCCHHHHHHHHHHHHh
Confidence 467889999999999988776654 67999999999999999999854
No 357
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=94.67 E-value=0.063 Score=43.50 Aligned_cols=97 Identities=11% Similarity=-0.012 Sum_probs=64.2
Q ss_pred CCCCCCeEEEecCCC-ChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEc----cC-CCCCCCC
Q 025144 66 GAKTGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEG----DA-LDLPFSD 139 (257)
Q Consensus 66 ~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~----d~-~~~~~~~ 139 (257)
+. ++.+||-+|+|. |..+..+++...++.+|+++|.+++-++.+++.- --.++.. |. ..+. ..
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lG---------a~~vi~~~~~~~~~~~~~-~g 236 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELG---------ADYVSEMKDAESLINKLT-DG 236 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHT---------CSEEECHHHHHHHHHHHH-TT
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhC---------CCEEeccccchHHHHHhh-cC
Confidence 56 889999999974 7778888887522578999999998888776531 1111211 10 0111 12
Q ss_pred CcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 140 CFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 140 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
..+|+|+-.-. ....+....+.|+++|.++....
T Consensus 237 ~g~D~vid~~g------~~~~~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 237 LGASIAIDLVG------TEETTYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp CCEEEEEESSC------CHHHHHHHHHHEEEEEEEEECCC
T ss_pred CCccEEEECCC------ChHHHHHHHHHhhcCCEEEEeCC
Confidence 36999985432 13467888899999999877543
No 358
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=94.66 E-value=0.16 Score=41.35 Aligned_cols=98 Identities=18% Similarity=0.183 Sum_probs=63.4
Q ss_pred hCCCCCCeEEEecCCC-ChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCC-CC--CCCCC
Q 025144 65 SGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDAL-DL--PFSDC 140 (257)
Q Consensus 65 ~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~-~~--~~~~~ 140 (257)
.++.++.+||-+|+|. |..+..+++.. +.+|+++|.+++-++.+++. + --.++..+-. +. ... +
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~--Ga~Vi~~~~~~~~~~~~~~l----G-----a~~v~~~~~~~~~~~~~~-~ 242 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAM--GAETYVISRSSRKREDAMKM----G-----ADHYIATLEEGDWGEKYF-D 242 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHH--TCEEEEEESSSTTHHHHHHH----T-----CSEEEEGGGTSCHHHHSC-S
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHc----C-----CCEEEcCcCchHHHHHhh-c
Confidence 5678899999999864 77888888875 56899999999888877653 1 1122222111 11 011 4
Q ss_pred cccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEe
Q 025144 141 FFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 141 ~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
.+|+|+-.-.-.. ...+....+.|+++|.++...
T Consensus 243 ~~D~vid~~g~~~----~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 243 TFDLIVVCASSLT----DIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp CEEEEEECCSCST----TCCTTTGGGGEEEEEEEEECC
T ss_pred CCCEEEECCCCCc----HHHHHHHHHHhcCCCEEEEec
Confidence 6999986443200 122445778899999987654
No 359
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=94.59 E-value=0.14 Score=40.59 Aligned_cols=76 Identities=17% Similarity=0.177 Sum_probs=53.9
Q ss_pred CCCCeEEEecCCCChhHHHHHHHhCCCce-EEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC---CC-CCcc
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQVGSQGK-VIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP---FS-DCFF 142 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~-v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~---~~-~~~~ 142 (257)
....+++|+-||.|.+..-+.+. +-... +.++|+++...+..+.+. +...++.+|+.++. ++ .+.+
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~a-G~~~~~v~a~E~d~~a~~ty~~N~--------~~~~~~~~DI~~i~~~~i~~~~~~ 84 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDL-GIQVDRYIASEVCEDSITVGMVRH--------QGKIMYVGDVRSVTQKHIQEWGPF 84 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHT-TBCEEEEEEECCCHHHHHHHHHHT--------TTCEEEECCGGGCCHHHHHHTCCC
T ss_pred CCCCEEEEeCcCccHHHHHHHHC-CCccceEEEEECCHHHHHHHHHhC--------CCCceeCCChHHccHHHhcccCCc
Confidence 34558999999999999888765 22222 589999998887766654 45567889988764 11 1368
Q ss_pred cEEEeccccc
Q 025144 143 DAITMGYGLR 152 (257)
Q Consensus 143 D~v~~~~~l~ 152 (257)
|+++......
T Consensus 85 Dll~ggpPCQ 94 (295)
T 2qrv_A 85 DLVIGGSPCN 94 (295)
T ss_dssp SEEEECCCCG
T ss_pred CEEEecCCCc
Confidence 9999755433
No 360
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=94.57 E-value=0.15 Score=41.40 Aligned_cols=97 Identities=16% Similarity=0.182 Sum_probs=63.1
Q ss_pred hhCCCCCCeEEEecC--CCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-----
Q 025144 64 WSGAKTGDNVLDVCC--GSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----- 136 (257)
Q Consensus 64 ~~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~----- 136 (257)
..++.++.+||-.|+ |.|..+..+++.. +.+|++++.+++.++.+++. + .-.++..+-.+..
T Consensus 165 ~~~~~~g~~vlV~GasggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~----g-----a~~~~d~~~~~~~~~~~~ 233 (351)
T 1yb5_A 165 SACVKAGESVLVHGASGGVGLAACQIARAY--GLKILGTAGTEEGQKIVLQN----G-----AHEVFNHREVNYIDKIKK 233 (351)
T ss_dssp TSCCCTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHT----T-----CSEEEETTSTTHHHHHHH
T ss_pred hhCCCCcCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChhHHHHHHHc----C-----CCEEEeCCCchHHHHHHH
Confidence 346778899999997 4577777777774 67999999998877766432 1 1122222111110
Q ss_pred -CCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEe
Q 025144 137 -FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 137 -~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
.....+|+++.+.. ...+....+.|+++|.++...
T Consensus 234 ~~~~~~~D~vi~~~G-------~~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 234 YVGEKGIDIIIEMLA-------NVNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp HHCTTCEEEEEESCH-------HHHHHHHHHHEEEEEEEEECC
T ss_pred HcCCCCcEEEEECCC-------hHHHHHHHHhccCCCEEEEEe
Confidence 11236999986543 135677888999999987754
No 361
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=94.47 E-value=0.13 Score=41.35 Aligned_cols=57 Identities=18% Similarity=0.077 Sum_probs=43.9
Q ss_pred HHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCCh---hHHHHHHhhhhh
Q 025144 56 IWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSK---NQLSMASSRQDL 116 (257)
Q Consensus 56 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~---~~~~~a~~~~~~ 116 (257)
.+.+.++... ..++..|||.-||+|..+....+. +.+++++|+++ ...+.+++++..
T Consensus 230 ~l~~~~i~~~-~~~~~~vlDpF~GsGtt~~aa~~~---~r~~ig~e~~~~~~~~~~~~~~Rl~~ 289 (319)
T 1eg2_A 230 AVIERLVRAL-SHPGSTVLDFFAGSGVTARVAIQE---GRNSICTDAAPVFKEYYQKQLTFLQD 289 (319)
T ss_dssp HHHHHHHHHH-SCTTCEEEETTCTTCHHHHHHHHH---TCEEEEEESSTHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHh-CCCCCEEEecCCCCCHHHHHHHHc---CCcEEEEECCccHHHHHHHHHHHHHH
Confidence 3334444444 367889999999999998887766 57999999999 999999988753
No 362
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=94.31 E-value=0.21 Score=40.15 Aligned_cols=98 Identities=18% Similarity=0.207 Sum_probs=63.8
Q ss_pred hhCCCCCCeEEEecC--CCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-----
Q 025144 64 WSGAKTGDNVLDVCC--GSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----- 136 (257)
Q Consensus 64 ~~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~----- 136 (257)
..+..++.+||-.|+ |.|..+..+++.. +.+|+++|.+++.++.+++. + .. .++..+-.+..
T Consensus 140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~~----g----~~-~~~d~~~~~~~~~i~~ 208 (333)
T 1wly_A 140 THKVKPGDYVLIHAAAGGMGHIMVPWARHL--GATVIGTVSTEEKAETARKL----G----CH-HTINYSTQDFAEVVRE 208 (333)
T ss_dssp TSCCCTTCEEEETTTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHH----T----CS-EEEETTTSCHHHHHHH
T ss_pred hhCCCCCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHc----C----CC-EEEECCCHHHHHHHHH
Confidence 346778899999995 5677888887774 67999999998777776542 1 11 12222111110
Q ss_pred -CCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 137 -FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 137 -~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
.....+|+++.+..- ..++...+.|+++|.++....
T Consensus 209 ~~~~~~~d~vi~~~g~-------~~~~~~~~~l~~~G~iv~~g~ 245 (333)
T 1wly_A 209 ITGGKGVDVVYDSIGK-------DTLQKSLDCLRPRGMCAAYGH 245 (333)
T ss_dssp HHTTCCEEEEEECSCT-------TTHHHHHHTEEEEEEEEECCC
T ss_pred HhCCCCCeEEEECCcH-------HHHHHHHHhhccCCEEEEEec
Confidence 112469999865432 346778889999999877643
No 363
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=94.31 E-value=0.13 Score=41.70 Aligned_cols=98 Identities=18% Similarity=0.232 Sum_probs=66.8
Q ss_pred CCCCCCeEEEecCCC-ChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC------CC
Q 025144 66 GAKTGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP------FS 138 (257)
Q Consensus 66 ~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~------~~ 138 (257)
...++.+||-+|+|. |..+..+++.. .+.+|+++|.+++-++.+++.- --.++..+- +.. ..
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~-g~~~Vi~~~~~~~~~~~~~~lG---------a~~~i~~~~-~~~~~v~~~t~ 236 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAV-SAARVIAVDLDDDRLALAREVG---------ADAAVKSGA-GAADAIRELTG 236 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHH-CCCEEEEEESCHHHHHHHHHTT---------CSEEEECST-THHHHHHHHHG
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHcC---------CCEEEcCCC-cHHHHHHHHhC
Confidence 567889999999875 78888888875 3579999999999888876541 112222221 110 11
Q ss_pred CCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEeec
Q 025144 139 DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 139 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
...+|+|+-.-. ....+....+.|+++|.+++....
T Consensus 237 g~g~d~v~d~~G------~~~~~~~~~~~l~~~G~iv~~G~~ 272 (345)
T 3jv7_A 237 GQGATAVFDFVG------AQSTIDTAQQVVAVDGHISVVGIH 272 (345)
T ss_dssp GGCEEEEEESSC------CHHHHHHHHHHEEEEEEEEECSCC
T ss_pred CCCCeEEEECCC------CHHHHHHHHHHHhcCCEEEEECCC
Confidence 236999985332 234778889999999999876543
No 364
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=94.28 E-value=0.21 Score=40.37 Aligned_cols=96 Identities=17% Similarity=0.221 Sum_probs=64.3
Q ss_pred hCCCCCCeEEEecCC-CChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCC-----
Q 025144 65 SGAKTGDNVLDVCCG-SGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFS----- 138 (257)
Q Consensus 65 ~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~----- 138 (257)
.+..++.+||-+|+| .|..+..+++.. +.+|+++|.+++-++.+++. + --.++ |..+..+.
T Consensus 160 ~~~~~g~~VlV~GaG~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~l----G-----a~~~~--d~~~~~~~~~~~~ 226 (339)
T 1rjw_A 160 TGAKPGEWVAIYGIGGLGHVAVQYAKAM--GLNVVAVDIGDEKLELAKEL----G-----ADLVV--NPLKEDAAKFMKE 226 (339)
T ss_dssp HTCCTTCEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT----T-----CSEEE--CTTTSCHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHC----C-----CCEEe--cCCCccHHHHHHH
Confidence 367888999999986 477788888774 57999999999888877542 1 11122 22211100
Q ss_pred -CCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 139 -DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 139 -~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
.+.+|+|+-... ....+....+.|+++|.++....
T Consensus 227 ~~~~~d~vid~~g------~~~~~~~~~~~l~~~G~~v~~g~ 262 (339)
T 1rjw_A 227 KVGGVHAAVVTAV------SKPAFQSAYNSIRRGGACVLVGL 262 (339)
T ss_dssp HHSSEEEEEESSC------CHHHHHHHHHHEEEEEEEEECCC
T ss_pred HhCCCCEEEECCC------CHHHHHHHHHHhhcCCEEEEecc
Confidence 036899985432 13567788889999999876543
No 365
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=94.21 E-value=0.24 Score=40.28 Aligned_cols=99 Identities=9% Similarity=0.047 Sum_probs=64.2
Q ss_pred hhhCCCCC--CeEEEecC--CCChhHHHHHHHhCCCc-eEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC--
Q 025144 63 SWSGAKTG--DNVLDVCC--GSGDLSFLLSEQVGSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-- 135 (257)
Q Consensus 63 ~~~~~~~~--~~vLdiG~--G~G~~~~~l~~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-- 135 (257)
...+..++ .+||-.|+ |.|..+..+++.. +. +|+++|.+++-++.+++.+ + .-.++..+-.+.
T Consensus 152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~--Ga~~Vi~~~~~~~~~~~~~~~~---g-----~~~~~d~~~~~~~~ 221 (357)
T 2zb4_A 152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFL--GCSRVVGICGTHEKCILLTSEL---G-----FDAAINYKKDNVAE 221 (357)
T ss_dssp HHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTS---C-----CSEEEETTTSCHHH
T ss_pred HhcCCCCCCccEEEEECCCcHHHHHHHHHHHHC--CCCeEEEEeCCHHHHHHHHHHc---C-----CceEEecCchHHHH
Confidence 34567788 99999997 4567777777763 66 9999999987777665533 1 111222111111
Q ss_pred ---CCCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEe
Q 025144 136 ---PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 136 ---~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
....+.+|+++.+.. ...+....+.|+++|.+++..
T Consensus 222 ~~~~~~~~~~d~vi~~~G-------~~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 222 QLRESCPAGVDVYFDNVG-------GNISDTVISQMNENSHIILCG 260 (357)
T ss_dssp HHHHHCTTCEEEEEESCC-------HHHHHHHHHTEEEEEEEEECC
T ss_pred HHHHhcCCCCCEEEECCC-------HHHHHHHHHHhccCcEEEEEC
Confidence 011126999986543 256788889999999987754
No 366
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=94.09 E-value=0.15 Score=42.00 Aligned_cols=99 Identities=20% Similarity=0.121 Sum_probs=64.9
Q ss_pred hhC-CCCCCeEEEecCCC-ChhHHHHHHHhCCC-ceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEcc---CCCC--
Q 025144 64 WSG-AKTGDNVLDVCCGS-GDLSFLLSEQVGSQ-GKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGD---ALDL-- 135 (257)
Q Consensus 64 ~~~-~~~~~~vLdiG~G~-G~~~~~l~~~~~~~-~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d---~~~~-- 135 (257)
..+ +.++.+||-+|+|. |..+..+++.. + .+|+++|.+++-++.+++. + --.++..+ -.++
T Consensus 189 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~~~~l----G-----a~~vi~~~~~~~~~~~~ 257 (380)
T 1vj0_A 189 EYPESFAGKTVVIQGAGPLGLFGVVIARSL--GAENVIVIAGSPNRLKLAEEI----G-----ADLTLNRRETSVEERRK 257 (380)
T ss_dssp TCSSCCBTCEEEEECCSHHHHHHHHHHHHT--TBSEEEEEESCHHHHHHHHHT----T-----CSEEEETTTSCHHHHHH
T ss_pred hcCCCCCCCEEEEECcCHHHHHHHHHHHHc--CCceEEEEcCCHHHHHHHHHc----C-----CcEEEeccccCcchHHH
Confidence 346 77889999999764 77888888874 5 4999999999888877643 1 11222222 0010
Q ss_pred ---C-CCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 136 ---P-FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 136 ---~-~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
. .....+|+|+-.-.- ...+....+.|+++|.++....
T Consensus 258 ~v~~~~~g~g~Dvvid~~g~------~~~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 258 AIMDITHGRGADFILEATGD------SRALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp HHHHHTTTSCEEEEEECSSC------TTHHHHHHHHEEEEEEEEECCC
T ss_pred HHHHHhCCCCCcEEEECCCC------HHHHHHHHHHHhcCCEEEEEec
Confidence 0 122369999854321 2356778889999999877643
No 367
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.03 E-value=0.058 Score=43.40 Aligned_cols=56 Identities=18% Similarity=0.036 Sum_probs=41.6
Q ss_pred CCeeEEEccCCC-CC-CCCCcccEEEecccccCc--------------ccHHHHHHHHHhcccCCCEEEEEe
Q 025144 123 KNIEWVEGDALD-LP-FSDCFFDAITMGYGLRNV--------------VDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 123 ~~~~~~~~d~~~-~~-~~~~~~D~v~~~~~l~~~--------------~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
....++++|..+ +. ++++++|+|++......- ......++.++++|+|||.+++..
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~ 84 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDF 84 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEE
Confidence 467788888765 32 567889999997665322 135778899999999999997753
No 368
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=94.02 E-value=0.16 Score=41.21 Aligned_cols=99 Identities=17% Similarity=0.151 Sum_probs=64.9
Q ss_pred hhhCCCCCCeEEEecC--CCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC----
Q 025144 63 SWSGAKTGDNVLDVCC--GSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP---- 136 (257)
Q Consensus 63 ~~~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~---- 136 (257)
...++.++.+||-.|+ |.|..+..+++.. +.+|+++|.+++-++.+++. + --.++..+-.+..
T Consensus 161 ~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~l----G-----a~~~~~~~~~~~~~~~~ 229 (353)
T 4dup_A 161 QMAGLTEGESVLIHGGTSGIGTTAIQLARAF--GAEVYATAGSTGKCEACERL----G-----AKRGINYRSEDFAAVIK 229 (353)
T ss_dssp TTTCCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHH----T-----CSEEEETTTSCHHHHHH
T ss_pred HhcCCCCCCEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhc----C-----CCEEEeCCchHHHHHHH
Confidence 3456788999999953 3577888888874 67999999999888877653 1 1122222221110
Q ss_pred -CCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 137 -FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 137 -~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
...+.+|+|+....- ..+....+.|+++|.+++...
T Consensus 230 ~~~~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 230 AETGQGVDIILDMIGA-------AYFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp HHHSSCEEEEEESCCG-------GGHHHHHHTEEEEEEEEECCC
T ss_pred HHhCCCceEEEECCCH-------HHHHHHHHHhccCCEEEEEEe
Confidence 013469999865432 246677889999999877643
No 369
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=93.95 E-value=0.2 Score=40.71 Aligned_cols=98 Identities=17% Similarity=0.096 Sum_probs=62.8
Q ss_pred hhCCCCCCeEEEecC--CCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC------
Q 025144 64 WSGAKTGDNVLDVCC--GSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL------ 135 (257)
Q Consensus 64 ~~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~------ 135 (257)
..++.++.+||-.|+ |.|..+..+++.. +.+|+++|.+++.++.+++. + .. .++..+-.+.
T Consensus 157 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~----g----~~-~~~~~~~~~~~~~~~~ 225 (354)
T 2j8z_A 157 VGNVQAGDYVLIHAGLSGVGTAAIQLTRMA--GAIPLVTAGSQKKLQMAEKL----G----AA-AGFNYKKEDFSEATLK 225 (354)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHH----T----CS-EEEETTTSCHHHHHHH
T ss_pred hcCCCCCCEEEEECCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHc----C----Cc-EEEecCChHHHHHHHH
Confidence 346778899999984 4577777777764 67999999999887777432 1 11 1222221111
Q ss_pred CCCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 136 PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 136 ~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
......+|+++.+..- ..+....+.|+++|.++....
T Consensus 226 ~~~~~~~d~vi~~~G~-------~~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 226 FTKGAGVNLILDCIGG-------SYWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp HTTTSCEEEEEESSCG-------GGHHHHHHHEEEEEEEEECCC
T ss_pred HhcCCCceEEEECCCc-------hHHHHHHHhccCCCEEEEEec
Confidence 0122469999865432 135667788999999877643
No 370
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=93.87 E-value=0.32 Score=39.66 Aligned_cols=92 Identities=14% Similarity=0.117 Sum_probs=61.9
Q ss_pred CCCeEEEec-CC-CChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC-----CCCCCc
Q 025144 69 TGDNVLDVC-CG-SGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-----PFSDCF 141 (257)
Q Consensus 69 ~~~~vLdiG-~G-~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~ 141 (257)
++.+||-.| +| .|..+..+++.+ .+.+|+++|.+++-++.+++. + --.++... .++ ....+.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~-~g~~Vi~~~~~~~~~~~~~~l----G-----ad~vi~~~-~~~~~~v~~~~~~g 239 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQR-TDLTVIATASRPETQEWVKSL----G-----AHHVIDHS-KPLAAEVAALGLGA 239 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHH-CCSEEEEECSSHHHHHHHHHT----T-----CSEEECTT-SCHHHHHHTTCSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHc----C-----CCEEEeCC-CCHHHHHHHhcCCC
Confidence 678999998 44 488888888864 367999999999888877653 1 11122111 111 122357
Q ss_pred ccEEEecccccCcccHHHHHHHHHhcccCCCEEEEE
Q 025144 142 FDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVL 177 (257)
Q Consensus 142 ~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~ 177 (257)
+|+|+-... ....+..+.+.|+++|.+++.
T Consensus 240 ~Dvvid~~g------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 240 PAFVFSTTH------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEEEEECSC------HHHHHHHHHHHSCTTCEEEEC
T ss_pred ceEEEECCC------chhhHHHHHHHhcCCCEEEEE
Confidence 999885322 345678888999999999876
No 371
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.78 E-value=0.81 Score=31.49 Aligned_cols=93 Identities=15% Similarity=0.050 Sum_probs=55.5
Q ss_pred CCeEEEecCCC-ChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC----CCCCcccE
Q 025144 70 GDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----FSDCFFDA 144 (257)
Q Consensus 70 ~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~D~ 144 (257)
..+|+=+|+|. |......+.. .+.+|+++|.+++.++.+++ ..+.++.+|..+.. ..-..+|+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~--~g~~v~vid~~~~~~~~~~~----------~g~~~i~gd~~~~~~l~~a~i~~ad~ 74 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLA--SDIPLVVIETSRTRVDELRE----------RGVRAVLGNAANEEIMQLAHLECAKW 74 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH--TTCCEEEEESCHHHHHHHHH----------TTCEEEESCTTSHHHHHHTTGGGCSE
T ss_pred CCCEEEECcCHHHHHHHHHHHH--CCCCEEEEECCHHHHHHHHH----------cCCCEEECCCCCHHHHHhcCcccCCE
Confidence 35789998864 4333333333 36799999999988777654 25678888887632 12246898
Q ss_pred EEecccccCcccHHHHHHHHHhcccCCCEEEEE
Q 025144 145 ITMGYGLRNVVDKRKALEESFRVLKPGSRISVL 177 (257)
Q Consensus 145 v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~ 177 (257)
|++...-. .....+-...+.+.|+..++..
T Consensus 75 vi~~~~~~---~~n~~~~~~a~~~~~~~~iiar 104 (140)
T 3fwz_A 75 LILTIPNG---YEAGEIVASARAKNPDIEIIAR 104 (140)
T ss_dssp EEECCSCH---HHHHHHHHHHHHHCSSSEEEEE
T ss_pred EEEECCCh---HHHHHHHHHHHHHCCCCeEEEE
Confidence 88643211 1112233345556677776543
No 372
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=93.76 E-value=0.54 Score=37.90 Aligned_cols=101 Identities=21% Similarity=0.258 Sum_probs=63.7
Q ss_pred hhhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-----
Q 025144 63 SWSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----- 136 (257)
Q Consensus 63 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~----- 136 (257)
+.....++.+||=+|+|. |..+..+++.. .+.+|+++|.+++-++.+++.- --.++...-.+..
T Consensus 157 ~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~-~g~~Vi~~~~~~~r~~~~~~~G---------a~~~i~~~~~~~~~~v~~ 226 (348)
T 4eez_A 157 KVSGVKPGDWQVIFGAGGLGNLAIQYAKNV-FGAKVIAVDINQDKLNLAKKIG---------ADVTINSGDVNPVDEIKK 226 (348)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHT-SCCEEEEEESCHHHHHHHHHTT---------CSEEEEC-CCCHHHHHHH
T ss_pred cccCCCCCCEEEEEcCCCccHHHHHHHHHh-CCCEEEEEECcHHHhhhhhhcC---------CeEEEeCCCCCHHHHhhh
Confidence 345678899999999986 45555666653 4679999999998777766542 1222222211110
Q ss_pred -CCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 137 -FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 137 -~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
.....+|.++.... -...+....+.|+++|.+++...
T Consensus 227 ~t~g~g~d~~~~~~~------~~~~~~~~~~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 227 ITGGLGVQSAIVCAV------ARIAFEQAVASLKPMGKMVAVAV 264 (348)
T ss_dssp HTTSSCEEEEEECCS------CHHHHHHHHHTEEEEEEEEECCC
T ss_pred hcCCCCceEEEEecc------CcchhheeheeecCCceEEEEec
Confidence 12234666664322 24567788899999999877543
No 373
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=93.41 E-value=0.34 Score=39.16 Aligned_cols=91 Identities=12% Similarity=0.183 Sum_probs=60.4
Q ss_pred CCCeEEEec-CC-CChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC-----CCCCCc
Q 025144 69 TGDNVLDVC-CG-SGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-----PFSDCF 141 (257)
Q Consensus 69 ~~~~vLdiG-~G-~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~ 141 (257)
++.+||-.| +| .|..+..+++.. +.+|++++.+++-++.+++. + --.++..+ .++ ....+.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~l----G-----a~~vi~~~-~~~~~~~~~~~~~g 217 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY--GLRVITTASRNETIEWTKKM----G-----ADIVLNHK-ESLLNQFKTQGIEL 217 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEECCSHHHHHHHHHH----T-----CSEEECTT-SCHHHHHHHHTCCC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhc----C-----CcEEEECC-ccHHHHHHHhCCCC
Confidence 788999994 44 477888888874 67999999999888877653 1 11222111 111 012346
Q ss_pred ccEEEecccccCcccHHHHHHHHHhcccCCCEEEEE
Q 025144 142 FDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVL 177 (257)
Q Consensus 142 ~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~ 177 (257)
+|+|+-... ....+..+.+.|+++|.++..
T Consensus 218 ~Dvv~d~~g------~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 218 VDYVFCTFN------TDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp EEEEEESSC------HHHHHHHHHHHEEEEEEEEES
T ss_pred ccEEEECCC------chHHHHHHHHHhccCCEEEEE
Confidence 999985332 345677888999999998654
No 374
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=93.26 E-value=0.19 Score=40.89 Aligned_cols=94 Identities=19% Similarity=0.193 Sum_probs=60.5
Q ss_pred CCCCC------CeEEEecCCC-ChhH-HHHH-HHhCCCce-EEEEeCChh---HHHHHHhhhhhhhhccCCCeeEEEccC
Q 025144 66 GAKTG------DNVLDVCCGS-GDLS-FLLS-EQVGSQGK-VIGLDFSKN---QLSMASSRQDLVSKACYKNIEWVEGDA 132 (257)
Q Consensus 66 ~~~~~------~~vLdiG~G~-G~~~-~~l~-~~~~~~~~-v~~~D~s~~---~~~~a~~~~~~~~~~~~~~~~~~~~d~ 132 (257)
+..++ .+||-+|+|. |..+ ..++ +.. +.+ |+++|.+++ -++.+++. ....+ |.
T Consensus 163 ~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~--Ga~~Vi~~~~~~~~~~~~~~~~~l----------Ga~~v--~~ 228 (357)
T 2b5w_A 163 YASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDK--GYENLYCLGRRDRPDPTIDIIEEL----------DATYV--DS 228 (357)
T ss_dssp HHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTT--CCCEEEEEECCCSSCHHHHHHHHT----------TCEEE--ET
T ss_pred CCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHc--CCcEEEEEeCCcccHHHHHHHHHc----------CCccc--CC
Confidence 44567 8999999854 6677 7777 653 566 999999887 77777542 11112 22
Q ss_pred CCCCCC-----CCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 133 LDLPFS-----DCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 133 ~~~~~~-----~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
.+..+. .+.+|+|+-.-. ....+....+.|+++|.++....
T Consensus 229 ~~~~~~~i~~~~gg~Dvvid~~g------~~~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 229 RQTPVEDVPDVYEQMDFIYEATG------FPKHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp TTSCGGGHHHHSCCEEEEEECSC------CHHHHHHHHHHEEEEEEEEECCC
T ss_pred CccCHHHHHHhCCCCCEEEECCC------ChHHHHHHHHHHhcCCEEEEEeC
Confidence 211100 236899984332 23467788899999999877644
No 375
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=93.05 E-value=0.51 Score=37.65 Aligned_cols=90 Identities=12% Similarity=0.162 Sum_probs=60.2
Q ss_pred eEEEecC--CCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEE-ccCCCC-CCCCCcccEEEe
Q 025144 72 NVLDVCC--GSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVE-GDALDL-PFSDCFFDAITM 147 (257)
Q Consensus 72 ~vLdiG~--G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~-~d~~~~-~~~~~~~D~v~~ 147 (257)
+||=.|+ |.|..+..+++.. +.+|++++.+++-++.+++. + --.++. .+.... ....+.+|+|+-
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~--Ga~Vi~~~~~~~~~~~~~~l----G-----a~~vi~~~~~~~~~~~~~~~~d~v~d 217 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL--GYQVAAVSGRESTHGYLKSL----G-----ANRILSRDEFAESRPLEKQLWAGAID 217 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCGGGHHHHHHH----T-----CSEEEEGGGSSCCCSSCCCCEEEEEE
T ss_pred eEEEECCCcHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhc----C-----CCEEEecCCHHHHHhhcCCCccEEEE
Confidence 4999997 4588889999885 67999999999888888653 1 111121 111111 123457998874
Q ss_pred cccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 148 GYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 148 ~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
.-. ...+....+.|+++|.++....
T Consensus 218 ~~g-------~~~~~~~~~~l~~~G~iv~~G~ 242 (324)
T 3nx4_A 218 TVG-------DKVLAKVLAQMNYGGCVAACGL 242 (324)
T ss_dssp SSC-------HHHHHHHHHTEEEEEEEEECCC
T ss_pred CCC-------cHHHHHHHHHHhcCCEEEEEec
Confidence 321 2378889999999999987643
No 376
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=92.81 E-value=0.55 Score=39.60 Aligned_cols=96 Identities=20% Similarity=0.181 Sum_probs=64.1
Q ss_pred hCCCCCCeEEEecC-C-CChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC------
Q 025144 65 SGAKTGDNVLDVCC-G-SGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP------ 136 (257)
Q Consensus 65 ~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~------ 136 (257)
..+.++.+||=+|+ | .|..+..+++.. +.++++++.+++-++.+++. + --.++...-.+..
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~--Ga~vi~~~~~~~~~~~~~~l----G-----a~~vi~~~~~d~~~~~~~~ 292 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAG--GANPICVVSSPQKAEICRAM----G-----AEAIIDRNAEGYRFWKDEN 292 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHH----T-----CCEEEETTTTTCCSEEETT
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc--CCeEEEEECCHHHHHHHHhh----C-----CcEEEecCcCccccccccc
Confidence 46788999999997 4 578888888874 67899999888888877553 1 1122221111110
Q ss_pred -----------------CCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEe
Q 025144 137 -----------------FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 137 -----------------~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
.....+|+|+-.-. ...+....+.|+++|.+++..
T Consensus 293 ~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G-------~~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 293 TQDPKEWKRFGKRIRELTGGEDIDIVFEHPG-------RETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp EECHHHHHHHHHHHHHHHTSCCEEEEEECSC-------HHHHHHHHHHEEEEEEEEESC
T ss_pred ccchHHHHHHHHHHHHHhCCCCCcEEEEcCC-------chhHHHHHHHhhCCcEEEEEe
Confidence 11246999985332 246778888999999997754
No 377
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=92.69 E-value=1.5 Score=30.04 Aligned_cols=69 Identities=14% Similarity=0.124 Sum_probs=45.3
Q ss_pred CCeEEEecCCCChhHHHHHHHh-CCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC----CCCCcccE
Q 025144 70 GDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----FSDCFFDA 144 (257)
Q Consensus 70 ~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~D~ 144 (257)
..+|+=+|+| ..+..+++.+ ..+.+|+++|.+++.++.+++ ....++.+|..+.. ..-..+|+
T Consensus 6 ~~~v~I~G~G--~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----------~~~~~~~gd~~~~~~l~~~~~~~~d~ 73 (141)
T 3llv_A 6 RYEYIVIGSE--AAGVGLVRELTAAGKKVLAVDKSKEKIELLED----------EGFDAVIADPTDESFYRSLDLEGVSA 73 (141)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----------TTCEEEECCTTCHHHHHHSCCTTCSE
T ss_pred CCEEEEECCC--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----------CCCcEEECCCCCHHHHHhCCcccCCE
Confidence 3579999885 4555554433 136799999999987766653 24677888887632 12346898
Q ss_pred EEeccc
Q 025144 145 ITMGYG 150 (257)
Q Consensus 145 v~~~~~ 150 (257)
|+....
T Consensus 74 vi~~~~ 79 (141)
T 3llv_A 74 VLITGS 79 (141)
T ss_dssp EEECCS
T ss_pred EEEecC
Confidence 886443
No 378
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=92.56 E-value=2 Score=36.47 Aligned_cols=78 Identities=14% Similarity=0.153 Sum_probs=53.6
Q ss_pred CeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCC------------
Q 025144 71 DNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFS------------ 138 (257)
Q Consensus 71 ~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------ 138 (257)
-+++|+-||.|.++.-+.+. + ...+.++|+++...+.-+.+.... +...++..|+.++...
T Consensus 89 ~~viDLFaG~GGlslG~~~a-G-~~~v~avE~d~~A~~ty~~N~~~~-----p~~~~~~~DI~~i~~~~~~~~~~~~~~~ 161 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFESI-G-GQCVFTSEWNKHAVRTYKANHYCD-----PATHHFNEDIRDITLSHQEGVSDEAAAE 161 (482)
T ss_dssp EEEEEESCTTSHHHHHHHTT-T-EEEEEEECCCHHHHHHHHHHSCCC-----TTTCEEESCTHHHHCTTCTTSCHHHHHH
T ss_pred ceEEEecCCccHHHHHHHHC-C-CEEEEEEeCCHHHHHHHHHhcccC-----CCcceeccchhhhhhccccccchhhHHh
Confidence 48999999999999888654 1 235889999998877776665211 3456677887654311
Q ss_pred -----CCcccEEEecccccCcc
Q 025144 139 -----DCFFDAITMGYGLRNVV 155 (257)
Q Consensus 139 -----~~~~D~v~~~~~l~~~~ 155 (257)
...+|+++.......+.
T Consensus 162 ~i~~~~~~~Dvl~gGpPCQ~FS 183 (482)
T 3me5_A 162 HIRQHIPEHDVLLAGFPCQPFS 183 (482)
T ss_dssp HHHHHSCCCSEEEEECCCCCC-
T ss_pred hhhhcCCCCCEEEecCCCcchh
Confidence 13589999877666553
No 379
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=92.45 E-value=0.13 Score=39.83 Aligned_cols=54 Identities=4% Similarity=0.004 Sum_probs=35.4
Q ss_pred CeeEEEccCCCC--CCCCCcccEEEecccccCc--------------ccHHHHHHHHHhcccCCCEEEEE
Q 025144 124 NIEWVEGDALDL--PFSDCFFDAITMGYGLRNV--------------VDKRKALEESFRVLKPGSRISVL 177 (257)
Q Consensus 124 ~~~~~~~d~~~~--~~~~~~~D~v~~~~~l~~~--------------~~~~~~l~~~~~~Lk~gG~l~~~ 177 (257)
...++++|..+. .++++++|+|++......- .-....++.++++|+|||.+++.
T Consensus 4 ~~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 4 INKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp SSSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCeEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 345666666432 1345688888886554321 12456788889999999998765
No 380
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=92.38 E-value=0.74 Score=37.49 Aligned_cols=90 Identities=18% Similarity=0.140 Sum_probs=58.1
Q ss_pred CCeEEEecCCC-ChhHHHHHHHhCCCceEEEEeCCh---hHHHHHHhhhhhhhhccCCCeeEEEccCCC-CC--C--CCC
Q 025144 70 GDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSK---NQLSMASSRQDLVSKACYKNIEWVEGDALD-LP--F--SDC 140 (257)
Q Consensus 70 ~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~---~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~-~~--~--~~~ 140 (257)
+.+||-+|+|. |..+..+++.. +.+|+++|.++ +-++.+++. + ...+ | .+ +. . ..+
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~~~~~----g------a~~v--~-~~~~~~~~~~~~~ 245 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY--GLEVWMANRREPTEVEQTVIEET----K------TNYY--N-SSNGYDKLKDSVG 245 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH--TCEEEEEESSCCCHHHHHHHHHH----T------CEEE--E-CTTCSHHHHHHHC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCccchHHHHHHHHh----C------Ccee--c-hHHHHHHHHHhCC
Confidence 88999999853 66677777775 56999999987 666665532 1 1222 2 22 11 0 014
Q ss_pred cccEEEecccccCcccHHHHH-HHHHhcccCCCEEEEEeec
Q 025144 141 FFDAITMGYGLRNVVDKRKAL-EESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 141 ~~D~v~~~~~l~~~~~~~~~l-~~~~~~Lk~gG~l~~~~~~ 180 (257)
.+|+|+...... ..+ +...+.|+++|.++.....
T Consensus 246 ~~d~vid~~g~~------~~~~~~~~~~l~~~G~iv~~g~~ 280 (366)
T 2cdc_A 246 KFDVIIDATGAD------VNILGNVIPLLGRNGVLGLFGFS 280 (366)
T ss_dssp CEEEEEECCCCC------THHHHHHGGGEEEEEEEEECSCC
T ss_pred CCCEEEECCCCh------HHHHHHHHHHHhcCCEEEEEecC
Confidence 699998654321 245 7788999999998776543
No 381
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=92.30 E-value=0.23 Score=40.44 Aligned_cols=98 Identities=16% Similarity=0.176 Sum_probs=61.5
Q ss_pred hCCC-CCCeEEEecCCC-ChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCC-CC-CCCCC
Q 025144 65 SGAK-TGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDAL-DL-PFSDC 140 (257)
Q Consensus 65 ~~~~-~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~-~~-~~~~~ 140 (257)
.... ++.+||-+|+|. |..+..+++.. +.+|+++|.+++-++.+++.+ + --.++..+-. .. .. .+
T Consensus 175 ~~~~~~g~~VlV~GaG~vG~~a~qlak~~--Ga~Vi~~~~~~~~~~~~~~~l---G-----a~~vi~~~~~~~~~~~-~~ 243 (357)
T 2cf5_A 175 FGLKQPGLRGGILGLGGVGHMGVKIAKAM--GHHVTVISSSNKKREEALQDL---G-----ADDYVIGSDQAKMSEL-AD 243 (357)
T ss_dssp TSTTSTTCEEEEECCSHHHHHHHHHHHHH--TCEEEEEESSTTHHHHHHTTS---C-----CSCEEETTCHHHHHHS-TT
T ss_pred cCCCCCCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEeCChHHHHHHHHHc---C-----CceeeccccHHHHHHh-cC
Confidence 4566 888999999874 77788888875 568999999988777776333 1 1112211100 00 01 13
Q ss_pred cccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 141 FFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 141 ~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
.+|+|+-.-.-. ..+....+.|+++|.++....
T Consensus 244 g~D~vid~~g~~------~~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 244 SLDYVIDTVPVH------HALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp TEEEEEECCCSC------CCSHHHHTTEEEEEEEEECSC
T ss_pred CCCEEEECCCCh------HHHHHHHHHhccCCEEEEeCC
Confidence 699998543211 124456788999999877543
No 382
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=92.18 E-value=0.77 Score=36.60 Aligned_cols=96 Identities=24% Similarity=0.184 Sum_probs=60.2
Q ss_pred hhhCCCCCCeEEEec-CC-CChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCC-CCCCC
Q 025144 63 SWSGAKTGDNVLDVC-CG-SGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD-LPFSD 139 (257)
Q Consensus 63 ~~~~~~~~~~vLdiG-~G-~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~ 139 (257)
...+..++.+||=+| +| .|..+..+++.. +.++++++ +++-.+.+++. + --.++..+-.+ +.-.-
T Consensus 146 ~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~--Ga~vi~~~-~~~~~~~~~~l----G-----a~~~i~~~~~~~~~~~~ 213 (321)
T 3tqh_A 146 NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQK--GTTVITTA-SKRNHAFLKAL----G-----AEQCINYHEEDFLLAIS 213 (321)
T ss_dssp HHTTCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEE-CHHHHHHHHHH----T-----CSEEEETTTSCHHHHCC
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHc--CCEEEEEe-ccchHHHHHHc----C-----CCEEEeCCCcchhhhhc
Confidence 456788899999997 44 588888888885 67899887 45445555432 2 11233222222 11011
Q ss_pred CcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEE
Q 025144 140 CFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVL 177 (257)
Q Consensus 140 ~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~ 177 (257)
..+|+|+-.-. ...+....+.|+++|.++..
T Consensus 214 ~g~D~v~d~~g-------~~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 214 TPVDAVIDLVG-------GDVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp SCEEEEEESSC-------HHHHHHHGGGEEEEEEEEEC
T ss_pred cCCCEEEECCC-------cHHHHHHHHhccCCCEEEEe
Confidence 46899885332 12337888999999998765
No 383
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=91.89 E-value=0.24 Score=40.51 Aligned_cols=98 Identities=15% Similarity=0.152 Sum_probs=60.7
Q ss_pred hCCC-CCCeEEEecCCC-ChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCC-CC-CCCCC
Q 025144 65 SGAK-TGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDAL-DL-PFSDC 140 (257)
Q Consensus 65 ~~~~-~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~-~~-~~~~~ 140 (257)
.... ++.+||-+|+|. |..+..+++.. +.+|++++.+++-++.+.+.+. --.++..+-. .+ .. .+
T Consensus 182 ~~~~~~g~~VlV~GaG~vG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~~lG--------a~~v~~~~~~~~~~~~-~~ 250 (366)
T 1yqd_A 182 FGLDEPGKHIGIVGLGGLGHVAVKFAKAF--GSKVTVISTSPSKKEEALKNFG--------ADSFLVSRDQEQMQAA-AG 250 (366)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCGGGHHHHHHTSC--------CSEEEETTCHHHHHHT-TT
T ss_pred cCcCCCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhcC--------CceEEeccCHHHHHHh-hC
Confidence 4566 888999999864 67777788774 5789999999988777664431 1112211100 00 01 13
Q ss_pred cccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 141 FFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 141 ~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
.+|+|+-.-.... .++...+.|+++|.++....
T Consensus 251 ~~D~vid~~g~~~------~~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 251 TLDGIIDTVSAVH------PLLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp CEEEEEECCSSCC------CSHHHHHHEEEEEEEEECCC
T ss_pred CCCEEEECCCcHH------HHHHHHHHHhcCCEEEEEcc
Confidence 6999986443221 23456677899999876543
No 384
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=91.74 E-value=0.58 Score=37.42 Aligned_cols=96 Identities=16% Similarity=0.158 Sum_probs=60.6
Q ss_pred hCCCCCC-eEEEecC--CCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEc-cC-CC-C-CC
Q 025144 65 SGAKTGD-NVLDVCC--GSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEG-DA-LD-L-PF 137 (257)
Q Consensus 65 ~~~~~~~-~vLdiG~--G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~-d~-~~-~-~~ 137 (257)
.+..++. +||-.|+ |.|..+..+++.. +.++++++.+++-++.+++. +. . .++.. +. .+ . ..
T Consensus 144 ~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~--Ga~vi~~~~~~~~~~~~~~l----Ga----~-~~i~~~~~~~~~~~~~ 212 (328)
T 1xa0_A 144 HGLTPERGPVLVTGATGGVGSLAVSMLAKR--GYTVEASTGKAAEHDYLRVL----GA----K-EVLAREDVMAERIRPL 212 (328)
T ss_dssp TTCCGGGCCEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCTTCHHHHHHT----TC----S-EEEECC---------C
T ss_pred cCCCCCCceEEEecCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHc----CC----c-EEEecCCcHHHHHHHh
Confidence 3566664 8999997 4578888888875 57899999998877777542 11 1 11111 11 01 0 12
Q ss_pred CCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEe
Q 025144 138 SDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 138 ~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
..+.+|+|+-.-.- ..+....+.++++|.+++..
T Consensus 213 ~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 213 DKQRWAAAVDPVGG-------RTLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp CSCCEEEEEECSTT-------TTHHHHHHTEEEEEEEEECS
T ss_pred cCCcccEEEECCcH-------HHHHHHHHhhccCCEEEEEe
Confidence 23469998854321 14667788999999987754
No 385
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=91.50 E-value=0.18 Score=39.98 Aligned_cols=91 Identities=18% Similarity=0.205 Sum_probs=60.4
Q ss_pred CCCCCeEEEecC--CCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccC-CCC--CCCCCc
Q 025144 67 AKTGDNVLDVCC--GSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDA-LDL--PFSDCF 141 (257)
Q Consensus 67 ~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~-~~~--~~~~~~ 141 (257)
..++.+||-+|+ |.|..+..+++.. +.+|+++|.+++.++.+++. + --.++..+- .+. .. +.
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~----g-----a~~~~~~~~~~~~~~~~--~~ 189 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM--GLRVLAAASRPEKLALPLAL----G-----AEEAATYAEVPERAKAW--GG 189 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSGGGSHHHHHT----T-----CSEEEEGGGHHHHHHHT--TS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhc----C-----CCEEEECCcchhHHHHh--cC
Confidence 678899999997 4577888888874 57999999998877777542 1 111222111 111 01 46
Q ss_pred ccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEe
Q 025144 142 FDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 142 ~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
+|+|+. ..- ..+....+.|+++|.++...
T Consensus 190 ~d~vid-~g~-------~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 190 LDLVLE-VRG-------KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp EEEEEE-CSC-------TTHHHHHTTEEEEEEEEEC-
T ss_pred ceEEEE-CCH-------HHHHHHHHhhccCCEEEEEe
Confidence 999986 331 24677888999999987653
No 386
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=91.47 E-value=0.11 Score=42.48 Aligned_cols=100 Identities=12% Similarity=0.062 Sum_probs=56.2
Q ss_pred CCeEEEecCCC-ChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEec
Q 025144 70 GDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMG 148 (257)
Q Consensus 70 ~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 148 (257)
+.+|+=+|+|. |..+...+... +.+|+++|.+++-++.+++... ..+.....+..++.-.-..+|+|+..
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~--Ga~V~v~dr~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~DvVI~~ 237 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGL--GAQVQIFDINVERLSYLETLFG-------SRVELLYSNSAEIETAVAEADLLIGA 237 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHG-------GGSEEEECCHHHHHHHHHTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHhhC-------ceeEeeeCCHHHHHHHHcCCCEEEEC
Confidence 47999999863 55566666664 5699999999988777765432 12222221111110001248999865
Q ss_pred ccccCcccHHHHHHHHHhcccCCCEEEEEe
Q 025144 149 YGLRNVVDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 149 ~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
-.......+.-+.+...+.+++||.++.+.
T Consensus 238 ~~~~~~~~~~li~~~~~~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 238 VLVPGRRAPILVPASLVEQMRTGSVIVDVA 267 (361)
T ss_dssp CCCTTSSCCCCBCHHHHTTSCTTCEEEETT
T ss_pred CCcCCCCCCeecCHHHHhhCCCCCEEEEEe
Confidence 433221111111334567789999876543
No 387
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=91.42 E-value=0.11 Score=42.88 Aligned_cols=101 Identities=14% Similarity=0.087 Sum_probs=55.6
Q ss_pred CCCeEEEecCCC-ChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEe
Q 025144 69 TGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 147 (257)
Q Consensus 69 ~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 147 (257)
++.+|+=+|+|. |......+..+ +.+|+++|.+++.++.+++.+. ..+.....+..++.-.-...|+|+.
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~--Ga~V~~~d~~~~~l~~~~~~~g-------~~~~~~~~~~~~l~~~l~~aDvVi~ 237 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGM--GATVTVLDINIDKLRQLDAEFC-------GRIHTRYSSAYELEGAVKRADLVIG 237 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTT-------TSSEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHhcC-------CeeEeccCCHHHHHHHHcCCCEEEE
Confidence 467999999864 55555555554 5699999999988777665431 1221111111111000124799986
Q ss_pred cccccCcccHHHHHHHHHhcccCCCEEEEEe
Q 025144 148 GYGLRNVVDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 148 ~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
.-.......+.-+.+...+.+||||.++.+.
T Consensus 238 ~~~~p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 238 AVLVPGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp CCCCTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CCCcCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 4322211111112345667789999876543
No 388
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=91.39 E-value=0.79 Score=36.66 Aligned_cols=97 Identities=15% Similarity=0.182 Sum_probs=62.3
Q ss_pred hCCCCCC-eEEEecC--CCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEc-c--CCCC-CC
Q 025144 65 SGAKTGD-NVLDVCC--GSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEG-D--ALDL-PF 137 (257)
Q Consensus 65 ~~~~~~~-~vLdiG~--G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~-d--~~~~-~~ 137 (257)
.+..++. +||-.|+ |.|..+..+++.. +.++++++.+++-++.+++. + --.++.. + .... ..
T Consensus 145 ~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~--Ga~vi~~~~~~~~~~~~~~l----G-----a~~v~~~~~~~~~~~~~~ 213 (330)
T 1tt7_A 145 NGLSPEKGSVLVTGATGGVGGIAVSMLNKR--GYDVVASTGNREAADYLKQL----G-----ASEVISREDVYDGTLKAL 213 (330)
T ss_dssp TTCCGGGCCEEEESTTSHHHHHHHHHHHHH--TCCEEEEESSSSTHHHHHHH----T-----CSEEEEHHHHCSSCCCSS
T ss_pred cCcCCCCceEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHc----C-----CcEEEECCCchHHHHHHh
Confidence 3566664 8999997 3577888888875 56899999988877777542 1 1111111 1 1111 12
Q ss_pred CCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 138 SDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 138 ~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
..+.+|+|+-.-. . ..+....+.++++|.+++...
T Consensus 214 ~~~~~d~vid~~g-----~--~~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 214 SKQQWQGAVDPVG-----G--KQLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp CCCCEEEEEESCC-----T--HHHHHHHTTEEEEEEEEECCC
T ss_pred hcCCccEEEECCc-----H--HHHHHHHHhhcCCCEEEEEec
Confidence 2346999885432 1 357788899999999877543
No 389
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=91.33 E-value=1.1 Score=37.57 Aligned_cols=96 Identities=17% Similarity=0.097 Sum_probs=62.9
Q ss_pred hCCCCCCeEEEecC-C-CChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEc---cCCCC----
Q 025144 65 SGAKTGDNVLDVCC-G-SGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEG---DALDL---- 135 (257)
Q Consensus 65 ~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~---d~~~~---- 135 (257)
.++.++.+||-.|+ | .|..+..+++.. +.++++++.+++-++.+++. +. . .++.. |..+.
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~--Ga~vi~~~~~~~~~~~~~~l----Ga----~-~~i~~~~~~~~~~~~~~ 284 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNG--GGIPVAVVSSAQKEAAVRAL----GC----D-LVINRAELGITDDIADD 284 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHT----TC----C-CEEEHHHHTCCTTGGGC
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhc----CC----C-EEEeccccccccccccc
Confidence 56788999999997 3 477888888874 67999999988888777543 11 1 11211 11000
Q ss_pred ----------------CCCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEe
Q 025144 136 ----------------PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 136 ----------------~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
......+|+|+-... ...+....+.|+++|.++...
T Consensus 285 ~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G-------~~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 285 PRRVVETGRKLAKLVVEKAGREPDIVFEHTG-------RVTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSCCSEEEECSC-------HHHHHHHHHHSCTTCEEEESC
T ss_pred ccccchhhhHHHHHHHHHhCCCceEEEECCC-------chHHHHHHHHHhcCCEEEEEe
Confidence 000246899986443 135677888999999997754
No 390
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=91.29 E-value=0.66 Score=37.44 Aligned_cols=95 Identities=15% Similarity=0.146 Sum_probs=62.6
Q ss_pred hhhCCCCCCeEEEecC-C-CChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC----
Q 025144 63 SWSGAKTGDNVLDVCC-G-SGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP---- 136 (257)
Q Consensus 63 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~---- 136 (257)
....+.++.+||-+|+ | .|..+..+++.. +.+|+++ .+++-++.+++. + ...+. +..+..
T Consensus 144 ~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~--Ga~Vi~~-~~~~~~~~~~~l----G------a~~i~-~~~~~~~~~~ 209 (343)
T 3gaz_A 144 DRAQVQDGQTVLIQGGGGGVGHVAIQIALAR--GARVFAT-ARGSDLEYVRDL----G------ATPID-ASREPEDYAA 209 (343)
T ss_dssp TTTCCCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEE-ECHHHHHHHHHH----T------SEEEE-TTSCHHHHHH
T ss_pred HhcCCCCCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEE-eCHHHHHHHHHc----C------CCEec-cCCCHHHHHH
Confidence 4456788999999994 3 578888888874 6789999 788777766543 1 11122 222211
Q ss_pred --CCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEe
Q 025144 137 --FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 137 --~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
.....+|+|+-.-. ...+....+.|+++|.++...
T Consensus 210 ~~~~~~g~D~vid~~g-------~~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 210 EHTAGQGFDLVYDTLG-------GPVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp HHHTTSCEEEEEESSC-------THHHHHHHHHEEEEEEEEESC
T ss_pred HHhcCCCceEEEECCC-------cHHHHHHHHHHhcCCeEEEEc
Confidence 12346999985432 146777888999999987653
No 391
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=91.24 E-value=0.73 Score=36.91 Aligned_cols=72 Identities=17% Similarity=0.226 Sum_probs=52.5
Q ss_pred eEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCC-CCCcccEEEeccc
Q 025144 72 NVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF-SDCFFDAITMGYG 150 (257)
Q Consensus 72 ~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~D~v~~~~~ 150 (257)
+|+|+=||.|.++.-+.+. + ..-+.++|+++.+.+.-+.+. .-.++.+|+.++.. .-...|+++....
T Consensus 2 kvidLFsG~GG~~~G~~~a-G-~~~v~a~e~d~~a~~ty~~N~---------~~~~~~~DI~~i~~~~~~~~D~l~ggpP 70 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKA-G-FRIICANEYDKSIWKTYESNH---------SAKLIKGDISKISSDEFPKCDGIIGGPP 70 (331)
T ss_dssp EEEEESCTTCHHHHHHHHT-T-CEEEEEEECCTTTHHHHHHHC---------CSEEEESCGGGCCGGGSCCCSEEECCCC
T ss_pred eEEEeCcCccHHHHHHHHC-C-CEEEEEEeCCHHHHHHHHHHC---------CCCcccCChhhCCHhhCCcccEEEecCC
Confidence 6999999999999888655 2 335779999999888777664 23577889887641 1135899997665
Q ss_pred ccCc
Q 025144 151 LRNV 154 (257)
Q Consensus 151 l~~~ 154 (257)
.+.+
T Consensus 71 CQ~f 74 (331)
T 3ubt_Y 71 SQSW 74 (331)
T ss_dssp GGGT
T ss_pred CCCc
Confidence 5544
No 392
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=91.14 E-value=1.9 Score=31.07 Aligned_cols=93 Identities=12% Similarity=0.152 Sum_probs=52.4
Q ss_pred CCeEEEecCCCChhHHHHHHHhC-C-CceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC----C-CCCcc
Q 025144 70 GDNVLDVCCGSGDLSFLLSEQVG-S-QGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----F-SDCFF 142 (257)
Q Consensus 70 ~~~vLdiG~G~G~~~~~l~~~~~-~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~----~-~~~~~ 142 (257)
+.+|+=+|+| ..+..+++.+. . +.+|+++|.+++.++.+++ ..+.++.+|..+.. . .-..+
T Consensus 39 ~~~v~IiG~G--~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----------~g~~~~~gd~~~~~~l~~~~~~~~a 106 (183)
T 3c85_A 39 HAQVLILGMG--RIGTGAYDELRARYGKISLGIEIREEAAQQHRS----------EGRNVISGDATDPDFWERILDTGHV 106 (183)
T ss_dssp TCSEEEECCS--HHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----------TTCCEEECCTTCHHHHHTBCSCCCC
T ss_pred CCcEEEECCC--HHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----------CCCCEEEcCCCCHHHHHhccCCCCC
Confidence 4589999875 44444443321 2 5689999999987766543 24556777765421 1 23468
Q ss_pred cEEEecccccCcccHHHHHHHHHhcccCCCEEEEE
Q 025144 143 DAITMGYGLRNVVDKRKALEESFRVLKPGSRISVL 177 (257)
Q Consensus 143 D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~ 177 (257)
|+|+.... .. .....+-...+.+.|++.++..
T Consensus 107 d~vi~~~~--~~-~~~~~~~~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 107 KLVLLAMP--HH-QGNQTALEQLQRRNYKGQIAAI 138 (183)
T ss_dssp CEEEECCS--SH-HHHHHHHHHHHHTTCCSEEEEE
T ss_pred CEEEEeCC--Ch-HHHHHHHHHHHHHCCCCEEEEE
Confidence 98886432 11 1122222344455666676554
No 393
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=90.82 E-value=0.99 Score=31.78 Aligned_cols=96 Identities=14% Similarity=0.092 Sum_probs=55.1
Q ss_pred CeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC-CC----CCCcccEE
Q 025144 71 DNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-PF----SDCFFDAI 145 (257)
Q Consensus 71 ~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-~~----~~~~~D~v 145 (257)
.-|||+|-|+|+.--++.+.+ |+.++.++|-.-.. .+....+.-.++.+|+.+. +. -..+.-++
T Consensus 42 GpVlElGLGNGRTydHLRe~~-P~R~I~vfDR~~~~----------hp~~~P~~e~~ilGdi~~tL~~~~~r~g~~a~La 110 (174)
T 3iht_A 42 GPVYELGLGNGRTYHHLRQHV-QGREIYVFERAVAS----------HPDSTPPEAQLILGDIRETLPATLERFGATASLV 110 (174)
T ss_dssp SCEEEECCTTCHHHHHHHHHC-CSSCEEEEESSCCC----------CGGGCCCGGGEEESCHHHHHHHHHHHHCSCEEEE
T ss_pred CceEEecCCCChhHHHHHHhC-CCCcEEEEEeeecc----------CCCCCCchHheecccHHHHHHHHHHhcCCceEEE
Confidence 369999999999999999997 78899999942110 0000013345677776652 11 02223333
Q ss_pred EecccccCccc----HHHHHHHHHhcccCCCEEEEE
Q 025144 146 TMGYGLRNVVD----KRKALEESFRVLKPGSRISVL 177 (257)
Q Consensus 146 ~~~~~l~~~~~----~~~~l~~~~~~Lk~gG~l~~~ 177 (257)
......++-+. ...+-.-+..+|.|||.++-.
T Consensus 111 HaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS~ 146 (174)
T 3iht_A 111 HADLGGHNREKNDRFARLISPLIEPHLAQGGLMVSS 146 (174)
T ss_dssp EECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEES
T ss_pred EeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEeC
Confidence 33333333321 112233456688999988643
No 394
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=90.79 E-value=0.087 Score=42.66 Aligned_cols=97 Identities=20% Similarity=0.251 Sum_probs=62.0
Q ss_pred hhCCCCCCeEEEecCCC-ChhHHHHHHHhCCCc-eEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-----
Q 025144 64 WSGAKTGDNVLDVCCGS-GDLSFLLSEQVGSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----- 136 (257)
Q Consensus 64 ~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~----- 136 (257)
..+. ++.+||-+|+|. |..+..+++.. +. +|+++|.+++-++.+++. . . .++..+-.++.
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~--Ga~~Vi~~~~~~~~~~~~~~l-a-------~--~v~~~~~~~~~~~~~~ 226 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRAS--GAGPILVSDPNPYRLAFARPY-A-------D--RLVNPLEEDLLEVVRR 226 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHT--TCCSEEEECSCHHHHGGGTTT-C-------S--EEECTTTSCHHHHHHH
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHh-H-------H--hccCcCccCHHHHHHH
Confidence 4466 889999999864 77788888774 56 899999988766655432 1 1 11111111110
Q ss_pred CCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 137 FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 137 ~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
.....+|+|+-.-. ....++...+.|+++|.++....
T Consensus 227 ~~~~g~D~vid~~g------~~~~~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 227 VTGSGVEVLLEFSG------NEAAIHQGLMALIPGGEARILGI 263 (343)
T ss_dssp HHSSCEEEEEECSC------CHHHHHHHHHHEEEEEEEEECCC
T ss_pred hcCCCCCEEEECCC------CHHHHHHHHHHHhcCCEEEEEec
Confidence 00246999985432 13567788899999999877543
No 395
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=90.67 E-value=1.5 Score=35.77 Aligned_cols=95 Identities=17% Similarity=0.137 Sum_probs=58.6
Q ss_pred CCCCCeEEEec-CC-CChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC---CCCCc
Q 025144 67 AKTGDNVLDVC-CG-SGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP---FSDCF 141 (257)
Q Consensus 67 ~~~~~~vLdiG-~G-~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~ 141 (257)
..++.+||-.| +| .|..+..+++.. +.+|++++ +++-.+.+++. + --.++..+-.++. .....
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~--Ga~Vi~~~-~~~~~~~~~~l----G-----a~~v~~~~~~~~~~~~~~~~g 248 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAW--DAHVTAVC-SQDASELVRKL----G-----ADDVIDYKSGSVEEQLKSLKP 248 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE-CGGGHHHHHHT----T-----CSEEEETTSSCHHHHHHTSCC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEe-ChHHHHHHHHc----C-----CCEEEECCchHHHHHHhhcCC
Confidence 67889999999 34 578888888874 57899998 66666665432 1 1122222211110 01146
Q ss_pred ccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEe
Q 025144 142 FDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 142 ~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
+|+|+-.-. .....+....+.++++|.++...
T Consensus 249 ~D~vid~~g-----~~~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 249 FDFILDNVG-----GSTETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp BSEEEESSC-----TTHHHHGGGGBCSSSCCEEEESC
T ss_pred CCEEEECCC-----ChhhhhHHHHHhhcCCcEEEEeC
Confidence 999985432 22234567778899999987653
No 396
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=90.61 E-value=3.1 Score=32.62 Aligned_cols=105 Identities=10% Similarity=0.084 Sum_probs=63.1
Q ss_pred CCCeEEEecCCCC-hhHHHHHHHh-CCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-----C----
Q 025144 69 TGDNVLDVCCGSG-DLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----F---- 137 (257)
Q Consensus 69 ~~~~vLdiG~G~G-~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~---- 137 (257)
.++++|=.|++.| .+...+++.+ ..+.+|..++.++...+.+++..+.. .++.++.+|+.+.. +
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~ 104 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEEL-----GAFVAGHCDVADAASIDAVFETLE 104 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHH-----TCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-----CCceEEECCCCCHHHHHHHHHHHH
Confidence 4668888887633 2333333322 13678999998876555444433322 46888999998742 0
Q ss_pred -CCCcccEEEecccccC-------cc-----c-----------HHHHHHHHHhcccCCCEEEEEe
Q 025144 138 -SDCFFDAITMGYGLRN-------VV-----D-----------KRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 138 -~~~~~D~v~~~~~l~~-------~~-----~-----------~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
..+..|+++.+..... +. + ...+++.+.+.++++|.++.+.
T Consensus 105 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~is 169 (293)
T 3grk_A 105 KKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLT 169 (293)
T ss_dssp HHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred HhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEe
Confidence 1246899998766542 11 1 1234566667777788887664
No 397
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=90.30 E-value=0.55 Score=38.84 Aligned_cols=42 Identities=12% Similarity=0.137 Sum_probs=33.6
Q ss_pred CCCeEEEecCCC-ChhHHHHHHHhCCCceEEEEeCChhHHHHHHh
Q 025144 69 TGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASS 112 (257)
Q Consensus 69 ~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~ 112 (257)
++.+|+=+|+|. |..+..++..+ +++|+++|.++.-++.+++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL--GAVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSTTHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHH
Confidence 467999999985 66677777764 6799999999988777765
No 398
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=90.22 E-value=0.26 Score=33.85 Aligned_cols=41 Identities=10% Similarity=0.095 Sum_probs=31.0
Q ss_pred CCCCCcccEEEeccccc-C-cccHHHHHHHHHhcccCCCEEEE
Q 025144 136 PFSDCFFDAITMGYGLR-N-VVDKRKALEESFRVLKPGSRISV 176 (257)
Q Consensus 136 ~~~~~~~D~v~~~~~l~-~-~~~~~~~l~~~~~~Lk~gG~l~~ 176 (257)
.+++++||.|+....-. . ..=+..++..+.+.|||||.|..
T Consensus 54 sLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 54 TLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred cCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 46789999999654333 2 22248899999999999999964
No 399
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=90.15 E-value=0.16 Score=41.64 Aligned_cols=101 Identities=12% Similarity=0.089 Sum_probs=53.6
Q ss_pred CCCeEEEecCCC-ChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEe
Q 025144 69 TGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 147 (257)
Q Consensus 69 ~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 147 (257)
++.+|+=+|+|. |..+...+... +.+|+++|.+++.++.+.+... ..+.....+..++.-.-..+|+|+.
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~--Ga~V~~~d~~~~~~~~~~~~~g-------~~~~~~~~~~~~l~~~~~~~DvVi~ 235 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGM--GAQVTILDVNHKRLQYLDDVFG-------GRVITLTATEANIKKSVQHADLLIG 235 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTT-------TSEEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHhcC-------ceEEEecCCHHHHHHHHhCCCEEEE
Confidence 357999999853 44445555553 5799999999987776654321 1222211111111000125799986
Q ss_pred cccccCcccHHHHHHHHHhcccCCCEEEEEe
Q 025144 148 GYGLRNVVDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 148 ~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
.........+..+.+...+.+++||.++.+.
T Consensus 236 ~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 236 AVLVPGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp CCC-------CCSCHHHHTTSCTTCEEEECC
T ss_pred CCCCCccccchhHHHHHHHhhcCCCEEEEEe
Confidence 5443211111112456677889999876543
No 400
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=90.07 E-value=1.8 Score=35.94 Aligned_cols=94 Identities=15% Similarity=0.122 Sum_probs=59.2
Q ss_pred CCeEEEecCCCChhHHHHHHHh-CCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC----CCCCcccE
Q 025144 70 GDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----FSDCFFDA 144 (257)
Q Consensus 70 ~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~D~ 144 (257)
..+|+=+|+| ..+..+++.+ ..+..|+++|.+++.++.+++ ..+.++.+|..+.. ..-...|+
T Consensus 4 ~~~viIiG~G--r~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----------~g~~vi~GDat~~~~L~~agi~~A~~ 71 (413)
T 3l9w_A 4 GMRVIIAGFG--RFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----------FGMKVFYGDATRMDLLESAGAAKAEV 71 (413)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----------TTCCCEESCTTCHHHHHHTTTTTCSE
T ss_pred CCeEEEECCC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----------CCCeEEEcCCCCHHHHHhcCCCccCE
Confidence 3478888875 4444444432 136799999999998887764 25678999998742 22356898
Q ss_pred EEecccccCcccHHHHHHHHHhcccCCCEEEEEe
Q 025144 145 ITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 145 v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
|++...- +.....+....+.+.|+..+++..
T Consensus 72 viv~~~~---~~~n~~i~~~ar~~~p~~~Iiara 102 (413)
T 3l9w_A 72 LINAIDD---PQTNLQLTEMVKEHFPHLQIIARA 102 (413)
T ss_dssp EEECCSS---HHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred EEECCCC---hHHHHHHHHHHHHhCCCCeEEEEE
Confidence 8864321 122333445556667877776543
No 401
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=89.83 E-value=1.7 Score=33.27 Aligned_cols=102 Identities=9% Similarity=0.128 Sum_probs=64.2
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCC----------
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF---------- 137 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~---------- 137 (257)
.++++|=.|++ |.+...+++.+ ..+.+|..+|.+++.++...+.+ + .++.++..|+.+...
T Consensus 7 ~gk~~lVTGas-~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~----~~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (255)
T 4eso_A 7 QGKKAIVIGGT-HGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---G----PRVHALRSDIADLNEIAVLGAAAGQ 78 (255)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---G----GGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C----CcceEEEccCCCHHHHHHHHHHHHH
Confidence 45677877755 44555444433 23679999999988776665544 1 478899999987420
Q ss_pred CCCcccEEEecccccCcc--------c-----------HHHHHHHHHhcccCCCEEEEEe
Q 025144 138 SDCFFDAITMGYGLRNVV--------D-----------KRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 138 ~~~~~D~v~~~~~l~~~~--------~-----------~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
..+..|+++.+....... + ...+.+.+.+.++++|.++.+.
T Consensus 79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 79 TLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp HHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEEC
Confidence 014689999766543221 1 1224566667777788877654
No 402
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=89.70 E-value=0.17 Score=41.58 Aligned_cols=42 Identities=17% Similarity=0.201 Sum_probs=33.4
Q ss_pred CCCeEEEecCCC-ChhHHHHHHHhCCCceEEEEeCChhHHHHHHh
Q 025144 69 TGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASS 112 (257)
Q Consensus 69 ~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~ 112 (257)
++.+|+=+|+|. |..+...+..+ +.+|+++|.++.-++.+.+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~~l~~~~~ 225 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRL--GAKTTGYDVRPEVAEQVRS 225 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHH--TCEEEEECSSGGGHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH
Confidence 567999999985 66666667665 5799999999988777765
No 403
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=89.64 E-value=4.2 Score=31.10 Aligned_cols=107 Identities=9% Similarity=0.128 Sum_probs=64.1
Q ss_pred CCCeEEEecCCCC-hhHHHHHHHh-CCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-----CC---
Q 025144 69 TGDNVLDVCCGSG-DLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----FS--- 138 (257)
Q Consensus 69 ~~~~vLdiG~G~G-~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~--- 138 (257)
.++++|=.|++.+ .+...+++.+ ..+.+|+.++.+....+.+.+.....+. .++.++..|+.+.. +.
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~ 82 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDR---NDSIILPCDVTNDAEIETCFASIK 82 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSS---CCCEEEECCCSSSHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCC---CCceEEeCCCCCHHHHHHHHHHHH
Confidence 3567888886521 1333333322 2367999999887666655554433321 37899999998753 00
Q ss_pred --CCcccEEEecccccC-------cc-----cH-----------HHHHHHHHhcccCCCEEEEEe
Q 025144 139 --DCFFDAITMGYGLRN-------VV-----DK-----------RKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 139 --~~~~D~v~~~~~l~~-------~~-----~~-----------~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
.+..|+++.+..... +. +. ..+++.+...++++|.++.+.
T Consensus 83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 147 (266)
T 3oig_A 83 EQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLT 147 (266)
T ss_dssp HHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred HHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 146899987665432 11 11 224566777788888887765
No 404
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=89.63 E-value=4.5 Score=33.08 Aligned_cols=102 Identities=15% Similarity=0.074 Sum_probs=63.0
Q ss_pred CCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEec
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMG 148 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 148 (257)
.+.+||.++.+.|.++..++.. .++.+.=|--.....+.++...+.. ..++.+... ..+ ....||+|+..
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~-----~~~~~~ds~~~~~~~~~n~~~~~~~-~~~~~~~~~-~~~---~~~~~~~v~~~ 107 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH-----KPYSIGDSYISELATRENLRLNGID-ESSVKFLDS-TAD---YPQQPGVVLIK 107 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG-----CCEEEESCHHHHHHHHHHHHHTTCC-GGGSEEEET-TSC---CCSSCSEEEEE
T ss_pred CCCCEEEECCCCCHHHHhhccC-----CceEEEhHHHHHHHHHHHHHHcCCC-ccceEeccc-ccc---cccCCCEEEEE
Confidence 4568999999999999888643 3344432444444444555433221 012444322 222 24679999874
Q ss_pred ccccCcccHHHHHHHHHhcccCCCEEEEEeecC
Q 025144 149 YGLRNVVDKRKALEESFRVLKPGSRISVLDFNK 181 (257)
Q Consensus 149 ~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 181 (257)
.. .........|..+...|++|+.+++..-+.
T Consensus 108 lp-k~~~~l~~~L~~l~~~l~~~~~i~~~g~~~ 139 (375)
T 4dcm_A 108 VP-KTLALLEQQLRALRKVVTSDTRIIAGAKAR 139 (375)
T ss_dssp CC-SCHHHHHHHHHHHHTTCCTTSEEEEEEEGG
T ss_pred cC-CCHHHHHHHHHHHHhhCCCCCEEEEEeccc
Confidence 33 334456778999999999999997776543
No 405
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=89.62 E-value=2 Score=35.05 Aligned_cols=93 Identities=14% Similarity=0.079 Sum_probs=59.5
Q ss_pred CCCCeEEEecCC--CChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-----CCCC
Q 025144 68 KTGDNVLDVCCG--SGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----FSDC 140 (257)
Q Consensus 68 ~~~~~vLdiG~G--~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~~~ 140 (257)
.++.+||=+|++ .|..+..+++.. +.+++++. +++-++.+++. .--.++...-.++. ..++
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~--Ga~Vi~~~-~~~~~~~~~~l---------Ga~~vi~~~~~~~~~~v~~~t~g 230 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLS--GYIPIATC-SPHNFDLAKSR---------GAEEVFDYRAPNLAQTIRTYTKN 230 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEE-CGGGHHHHHHT---------TCSEEEETTSTTHHHHHHHHTTT
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe-CHHHHHHHHHc---------CCcEEEECCCchHHHHHHHHccC
Confidence 678899999983 688888998885 67888885 77777766543 11223332222210 1134
Q ss_pred cccEEEecccccCcccHHHHHHHHHhcc-cCCCEEEEEe
Q 025144 141 FFDAITMGYGLRNVVDKRKALEESFRVL-KPGSRISVLD 178 (257)
Q Consensus 141 ~~D~v~~~~~l~~~~~~~~~l~~~~~~L-k~gG~l~~~~ 178 (257)
.+|+|+-.-. -...+....+.| +++|.++...
T Consensus 231 ~~d~v~d~~g------~~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 231 NLRYALDCIT------NVESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp CCCEEEESSC------SHHHHHHHHHHSCTTCEEEEESS
T ss_pred CccEEEECCC------chHHHHHHHHHhhcCCCEEEEEe
Confidence 5999984322 234567777788 6999987654
No 406
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=89.25 E-value=4.4 Score=31.33 Aligned_cols=105 Identities=13% Similarity=0.096 Sum_probs=63.7
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCceEEEEeCC------------hhHHHHHHhhhhhhhhccCCCeeEEEccCCCC
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFS------------KNQLSMASSRQDLVSKACYKNIEWVEGDALDL 135 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s------------~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 135 (257)
.++++|=-|++. .+...+++.+ ..+.+|+.+|.+ .+.++.+...+...+ .++.++..|+.+.
T Consensus 9 ~gk~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~ 83 (287)
T 3pxx_A 9 QDKVVLVTGGAR-GQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG----RKAYTAEVDVRDR 83 (287)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT----SCEEEEECCTTCH
T ss_pred CCCEEEEeCCCC-hHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC----CceEEEEccCCCH
Confidence 356777777654 4444444433 236799999987 555555544443322 5789999999874
Q ss_pred C-----C-----CCCcccEEEecccccCc------cc-----------HHHHHHHHHhcccCCCEEEEEe
Q 025144 136 P-----F-----SDCFFDAITMGYGLRNV------VD-----------KRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 136 ~-----~-----~~~~~D~v~~~~~l~~~------~~-----------~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
. + ..+..|+++.+...... ++ ...+++.+.+.++++|.++.+.
T Consensus 84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 84 AAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 2 0 01468999977654321 11 1234566777777888876653
No 407
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=89.21 E-value=3.2 Score=32.97 Aligned_cols=81 Identities=12% Similarity=0.056 Sum_probs=53.1
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-----C-----
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----F----- 137 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~----- 137 (257)
.+++||=.|++ |.++..+++.+ ..+.+|++++.+++.++.+.+.+...+.. .++.++..|+.+.. +
T Consensus 7 ~~k~vlVTGas-~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~ 83 (319)
T 3ioy_A 7 AGRTAFVTGGA-NGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSG--PEVMGVQLDVASREGFKMAADEVEA 83 (319)
T ss_dssp TTCEEEEETTT-STHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCG--GGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEcCCc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC--CeEEEEECCCCCHHHHHHHHHHHHH
Confidence 35578877765 44555444443 23679999999998887776665443311 37889999998742 0
Q ss_pred CCCcccEEEeccccc
Q 025144 138 SDCFFDAITMGYGLR 152 (257)
Q Consensus 138 ~~~~~D~v~~~~~l~ 152 (257)
..+..|+++.+....
T Consensus 84 ~~g~id~lv~nAg~~ 98 (319)
T 3ioy_A 84 RFGPVSILCNNAGVN 98 (319)
T ss_dssp HTCCEEEEEECCCCC
T ss_pred hCCCCCEEEECCCcC
Confidence 014689999876643
No 408
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=88.98 E-value=6.5 Score=30.23 Aligned_cols=70 Identities=11% Similarity=0.020 Sum_probs=51.0
Q ss_pred CeEEEecCCCChhHHHHHHHh-CCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEecc
Q 025144 71 DNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGY 149 (257)
Q Consensus 71 ~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 149 (257)
.+||=.| + |..+..+++.+ ..+.+|++++.++........ .++.++.+|+.++. -..+|+|+...
T Consensus 6 ~~ilVtG-a-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----------~~~~~~~~D~~d~~--~~~~d~vi~~a 71 (286)
T 3ius_A 6 GTLLSFG-H-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA----------SGAEPLLWPGEEPS--LDGVTHLLIST 71 (286)
T ss_dssp CEEEEET-C-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH----------TTEEEEESSSSCCC--CTTCCEEEECC
T ss_pred CcEEEEC-C-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh----------CCCeEEEecccccc--cCCCCEEEECC
Confidence 4799999 4 88888888765 235699999988765443321 47889999998866 45689999766
Q ss_pred cccCc
Q 025144 150 GLRNV 154 (257)
Q Consensus 150 ~l~~~ 154 (257)
.....
T Consensus 72 ~~~~~ 76 (286)
T 3ius_A 72 APDSG 76 (286)
T ss_dssp CCBTT
T ss_pred Ccccc
Confidence 54433
No 409
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=88.38 E-value=2.5 Score=29.48 Aligned_cols=95 Identities=16% Similarity=0.055 Sum_probs=50.1
Q ss_pred CCCCeEEEecCCC-ChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC----CCCCcc
Q 025144 68 KTGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----FSDCFF 142 (257)
Q Consensus 68 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~ 142 (257)
.++.+|+=+|+|. |......+.. .+.+|+++|.+++.++.++.. ....++.+|..+.. ..-..+
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~--~g~~V~vid~~~~~~~~~~~~---------~g~~~~~~d~~~~~~l~~~~~~~a 85 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASS--SGHSVVVVDKNEYAFHRLNSE---------FSGFTVVGDAAEFETLKECGMEKA 85 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCGGGGGGSCTT---------CCSEEEESCTTSHHHHHTTTGGGC
T ss_pred cCCCcEEEECCCHHHHHHHHHHHh--CCCeEEEEECCHHHHHHHHhc---------CCCcEEEecCCCHHHHHHcCcccC
Confidence 4567999998764 4333333333 356999999988654433211 23456666654321 112458
Q ss_pred cEEEecccccCcccHHHHHHHHHhcccCCCEEEE
Q 025144 143 DAITMGYGLRNVVDKRKALEESFRVLKPGSRISV 176 (257)
Q Consensus 143 D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~ 176 (257)
|+|+..-.- +.....+..+.+.+.+...++.
T Consensus 86 d~Vi~~~~~---~~~~~~~~~~~~~~~~~~~iv~ 116 (155)
T 2g1u_A 86 DMVFAFTND---DSTNFFISMNARYMFNVENVIA 116 (155)
T ss_dssp SEEEECSSC---HHHHHHHHHHHHHTSCCSEEEE
T ss_pred CEEEEEeCC---cHHHHHHHHHHHHHCCCCeEEE
Confidence 988864321 1222333334444445445543
No 410
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=88.23 E-value=6.9 Score=30.46 Aligned_cols=80 Identities=11% Similarity=0.031 Sum_probs=52.2
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC-C----C-----
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL-P----F----- 137 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-~----~----- 137 (257)
.+++||=.|++ |.++..+++.+ ..+.+|++++.+.+..+.+.+.+...+. .++.++..|+.+. . +
T Consensus 11 ~~k~vlITGas-~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~Dl~~~~~~v~~~~~~~~ 86 (311)
T 3o26_A 11 KRRCAVVTGGN-KGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNH---ENVVFHQLDVTDPIATMSSLADFIK 86 (311)
T ss_dssp -CCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC---CSEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCcEEEEecCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC---CceEEEEccCCCcHHHHHHHHHHHH
Confidence 35567766654 55555555443 2367999999998877766666543321 4789999999885 2 0
Q ss_pred -CCCcccEEEeccccc
Q 025144 138 -SDCFFDAITMGYGLR 152 (257)
Q Consensus 138 -~~~~~D~v~~~~~l~ 152 (257)
..+..|+++.+....
T Consensus 87 ~~~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 87 THFGKLDILVNNAGVA 102 (311)
T ss_dssp HHHSSCCEEEECCCCC
T ss_pred HhCCCCCEEEECCccc
Confidence 014689999877654
No 411
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=88.11 E-value=5.7 Score=30.35 Aligned_cols=77 Identities=5% Similarity=-0.072 Sum_probs=52.0
Q ss_pred CCCeEEEecCC----CCh-hHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-------
Q 025144 69 TGDNVLDVCCG----SGD-LSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP------- 136 (257)
Q Consensus 69 ~~~~vLdiG~G----~G~-~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~------- 136 (257)
.++++|=-|++ -|. .+..|++. +++|..+|.+++.++.+.+.++..+. .++.+++.|+.+..
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~---Ga~Vvi~~r~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~ 78 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQL---GAKLVFTYRKERSRKELEKLLEQLNQ---PEAHLYQIDVQSDEEVINGFE 78 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHT---TCEEEEEESSGGGHHHHHHHHGGGTC---SSCEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCC---CcEEEEEccCCCHHHHHHHHH
Confidence 46688888853 333 23344443 78999999999888887777655432 47888999998742
Q ss_pred ---CCCCcccEEEecccc
Q 025144 137 ---FSDCFFDAITMGYGL 151 (257)
Q Consensus 137 ---~~~~~~D~v~~~~~l 151 (257)
-.-+..|+++.+..+
T Consensus 79 ~~~~~~G~iD~lvnnAg~ 96 (256)
T 4fs3_A 79 QIGKDVGNIDGVYHSIAF 96 (256)
T ss_dssp HHHHHHCCCSEEEECCCC
T ss_pred HHHHHhCCCCEEEecccc
Confidence 012678999876553
No 412
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=87.80 E-value=3.8 Score=32.58 Aligned_cols=89 Identities=22% Similarity=0.223 Sum_probs=53.0
Q ss_pred CCeEEEecCCC-Ch-hHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCC-CCCCCCcccEEE
Q 025144 70 GDNVLDVCCGS-GD-LSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALD-LPFSDCFFDAIT 146 (257)
Q Consensus 70 ~~~vLdiG~G~-G~-~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~ 146 (257)
..+|.=||+|. |. ++..+.+. +...+|+++|.+++.++.+.+. .-+.....|..+ . -...|+|+
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~-G~~~~V~~~dr~~~~~~~a~~~---------G~~~~~~~~~~~~~---~~~aDvVi 99 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRS-GFKGKIYGYDINPESISKAVDL---------GIIDEGTTSIAKVE---DFSPDFVM 99 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHT-TCCSEEEEECSCHHHHHHHHHT---------TSCSEEESCTTGGG---GGCCSEEE
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-CCCCEEEEEECCHHHHHHHHHC---------CCcchhcCCHHHHh---hccCCEEE
Confidence 35899998774 33 33344333 2222899999999887776543 111112233332 1 13479998
Q ss_pred ecccccCcccHHHHHHHHHhcccCCCEE
Q 025144 147 MGYGLRNVVDKRKALEESFRVLKPGSRI 174 (257)
Q Consensus 147 ~~~~l~~~~~~~~~l~~~~~~Lk~gG~l 174 (257)
..-... ....+++++...++++..+
T Consensus 100 lavp~~---~~~~vl~~l~~~l~~~~iv 124 (314)
T 3ggo_A 100 LSSPVR---TFREIAKKLSYILSEDATV 124 (314)
T ss_dssp ECSCGG---GHHHHHHHHHHHSCTTCEE
T ss_pred EeCCHH---HHHHHHHHHhhccCCCcEE
Confidence 754433 3466788888888888654
No 413
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=87.70 E-value=5.4 Score=31.09 Aligned_cols=105 Identities=11% Similarity=0.035 Sum_probs=62.1
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCceEEEEeCChhH-HHHHHhhhhhhhhccCCCeeEEEccCCCCC-----C----
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQ-LSMASSRQDLVSKACYKNIEWVEGDALDLP-----F---- 137 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~-~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~---- 137 (257)
.++++|=.|++ |.+...+++.+ ..+.+|+.++.+.+. .+...+..+..+ .++.++.+|+.+.. +
T Consensus 46 ~gk~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~ 120 (291)
T 3ijr_A 46 KGKNVLITGGD-SGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG----VKCVLLPGDLSDEQHCKDIVQETV 120 (291)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT----CCEEEEESCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC----CcEEEEECCCCCHHHHHHHHHHHH
Confidence 35678877765 44555544433 236789999987653 333333333222 57889999998742 0
Q ss_pred -CCCcccEEEecccccC----cc-----c-----------HHHHHHHHHhcccCCCEEEEEe
Q 025144 138 -SDCFFDAITMGYGLRN----VV-----D-----------KRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 138 -~~~~~D~v~~~~~l~~----~~-----~-----------~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
..+..|+++.+..... +. + ...+++.+.+.++++|.++.+.
T Consensus 121 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 121 RQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp HHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred HHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 0146899997654321 11 1 1234666777788888876653
No 414
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=87.39 E-value=0.58 Score=36.45 Aligned_cols=98 Identities=14% Similarity=0.069 Sum_probs=57.5
Q ss_pred CCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEE-EccCCCCCCCCCcccEEEeccc----cc
Q 025144 78 CGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWV-EGDALDLPFSDCFFDAITMGYG----LR 152 (257)
Q Consensus 78 ~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~D~v~~~~~----l~ 152 (257)
++.|.....+.+. ++..+..+|..- ..-.+++....+ .+...+. ++|+..... .+.+|+|++... -|
T Consensus 150 ~~~~~~~~~~~k~--~g~~vl~v~~~~---~~p~k~v~wi~P--i~GAt~~~~lDfg~p~~-~~k~DvV~SDMApn~sGh 221 (320)
T 2hwk_A 150 HPQSDFSSFVSKL--KGRTVLVVGEKL---SVPGKMVDWLSD--RPEATFRARLDLGIPGD-VPKYDIIFVNVRTPYKYH 221 (320)
T ss_dssp CCCCCCHHHHHTS--SCSEEEEEESCC---CCTTSEEEEEES--STTCSEECCGGGCSCTT-SCCEEEEEEECCCCCCSC
T ss_pred cCCCCHHHHHhhC--CCcEEEEEeccc---ccCCceeEeecc--CCCceeecccccCCccc-cCcCCEEEEcCCCCCCCc
Confidence 4556666666554 577888886321 112222222221 1344555 777776443 267999998544 23
Q ss_pred Ccc---c----HHHHHHHHHhcccCCCEEEEEeecCCC
Q 025144 153 NVV---D----KRKALEESFRVLKPGSRISVLDFNKST 183 (257)
Q Consensus 153 ~~~---~----~~~~l~~~~~~Lk~gG~l~~~~~~~~~ 183 (257)
+.. | ..-+++....+|+|||.+++-.+...+
T Consensus 222 ~yqQC~DHarii~Lal~fA~~vLkPGGtfV~KvyggaD 259 (320)
T 2hwk_A 222 HYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGYAD 259 (320)
T ss_dssp HHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCCCS
T ss_pred cccccchHHHHHHHHHHHHHHhcCCCceEEEEEecCCc
Confidence 311 2 122577788899999999998877654
No 415
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=87.27 E-value=5.6 Score=27.50 Aligned_cols=96 Identities=13% Similarity=-0.004 Sum_probs=55.4
Q ss_pred CCeEEEecCCCChhHHHHHHHh-CCCceEEEEeCCh-hHHHHHHhhhhhhhhccCCCeeEEEccCCCCC----CCCCccc
Q 025144 70 GDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSK-NQLSMASSRQDLVSKACYKNIEWVEGDALDLP----FSDCFFD 143 (257)
Q Consensus 70 ~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~-~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~D 143 (257)
..+|+=+|+ |..+..+++.+ ..+.+|+++|.++ +..+....... ..+.++.+|..+.. ..-+..|
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~-------~~~~~i~gd~~~~~~l~~a~i~~ad 73 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG-------DNADVIPGDSNDSSVLKKAGIDRCR 73 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC-------TTCEEEESCTTSHHHHHHHTTTTCS
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc-------CCCeEEEcCCCCHHHHHHcChhhCC
Confidence 346887876 56666655543 1357899999974 44434333221 35788999987632 1124689
Q ss_pred EEEecccccCcccHHHHHHHHHhcccCCCEEEEE
Q 025144 144 AITMGYGLRNVVDKRKALEESFRVLKPGSRISVL 177 (257)
Q Consensus 144 ~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~ 177 (257)
+|++.-.- +.....+....+.+.|...++..
T Consensus 74 ~vi~~~~~---d~~n~~~~~~a~~~~~~~~ii~~ 104 (153)
T 1id1_A 74 AILALSDN---DADNAFVVLSAKDMSSDVKTVLA 104 (153)
T ss_dssp EEEECSSC---HHHHHHHHHHHHHHTSSSCEEEE
T ss_pred EEEEecCC---hHHHHHHHHHHHHHCCCCEEEEE
Confidence 88874321 12233444555566666666543
No 416
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=87.19 E-value=1.2 Score=37.75 Aligned_cols=65 Identities=14% Similarity=0.152 Sum_probs=47.6
Q ss_pred eEEEecCCCChhHHHHHHHhC-CCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC----CCCCcccEEE
Q 025144 72 NVLDVCCGSGDLSFLLSEQVG-SQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----FSDCFFDAIT 146 (257)
Q Consensus 72 ~vLdiG~G~G~~~~~l~~~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~D~v~ 146 (257)
+|+=+|| |..+..+++.+. .+.+|+.+|.+++.++.+.+.+ .+.++.+|..+.. ..-+..|+++
T Consensus 5 ~iiI~G~--G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~---------~~~~i~Gd~~~~~~L~~Agi~~ad~~i 73 (461)
T 4g65_A 5 KIIILGA--GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY---------DLRVVNGHASHPDVLHEAGAQDADMLV 73 (461)
T ss_dssp EEEEECC--SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS---------SCEEEESCTTCHHHHHHHTTTTCSEEE
T ss_pred EEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc---------CcEEEEEcCCCHHHHHhcCCCcCCEEE
Confidence 5666655 567777777663 3578999999999988877663 6788999998753 1235689887
Q ss_pred e
Q 025144 147 M 147 (257)
Q Consensus 147 ~ 147 (257)
+
T Consensus 74 a 74 (461)
T 4g65_A 74 A 74 (461)
T ss_dssp E
T ss_pred E
Confidence 6
No 417
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=86.93 E-value=0.46 Score=39.14 Aligned_cols=42 Identities=17% Similarity=0.155 Sum_probs=32.4
Q ss_pred CCCeEEEecCCC-ChhHHHHHHHhCCCceEEEEeCChhHHHHHHh
Q 025144 69 TGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASS 112 (257)
Q Consensus 69 ~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~ 112 (257)
++.+|+=+|+|. |..+..+++.+ +.+|+++|.++...+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~--Ga~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRL--GAVVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH
Confidence 578999999985 66666777765 5689999999877766654
No 418
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=86.85 E-value=4.6 Score=31.06 Aligned_cols=80 Identities=19% Similarity=0.157 Sum_probs=53.3
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC----------C
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----------F 137 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~----------~ 137 (257)
.++++|=-|++. .+...+++.+ ..+++|...|.+++.++.+.+.+...+ .++..+..|+.+.. -
T Consensus 8 ~gKvalVTGas~-GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g----~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (255)
T 4g81_D 8 TGKTALVTGSAR-GLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG----YDAHGVAFDVTDELAIEAAFSKLDA 82 (255)
T ss_dssp TTCEEEETTCSS-HHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT----CCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC----CcEEEEEeeCCCHHHHHHHHHHHHH
Confidence 355666666554 4444444433 246899999999988887777665543 57888999998742 1
Q ss_pred CCCcccEEEecccccC
Q 025144 138 SDCFFDAITMGYGLRN 153 (257)
Q Consensus 138 ~~~~~D~v~~~~~l~~ 153 (257)
.-+..|+++.+.....
T Consensus 83 ~~G~iDiLVNNAG~~~ 98 (255)
T 4g81_D 83 EGIHVDILINNAGIQY 98 (255)
T ss_dssp TTCCCCEEEECCCCCC
T ss_pred HCCCCcEEEECCCCCC
Confidence 2367999998766443
No 419
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=86.67 E-value=1.8 Score=33.23 Aligned_cols=104 Identities=14% Similarity=0.123 Sum_probs=63.8
Q ss_pred CCeEEEecCCCChhHHHHHHHh-C-CCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-----CC----
Q 025144 70 GDNVLDVCCGSGDLSFLLSEQV-G-SQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----FS---- 138 (257)
Q Consensus 70 ~~~vLdiG~G~G~~~~~l~~~~-~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~---- 138 (257)
+.+||=.| |+|.++..+++.+ . .+.+|++++.+++..+...+.+...+ .++.++.+|+.+.. +.
T Consensus 4 ~k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~Dl~~~~~~~~~~~~~~~ 78 (276)
T 1wma_A 4 IHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG----LSPRFHQLDIDDLQSIRALRDFLRK 78 (276)
T ss_dssp CCEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT----CCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC----CeeEEEECCCCCHHHHHHHHHHHHH
Confidence 45677555 6677777766654 2 36799999998876666555543322 47889999998742 00
Q ss_pred -CCcccEEEecccccCc--------cc-----------HHHHHHHHHhcccCCCEEEEEe
Q 025144 139 -DCFFDAITMGYGLRNV--------VD-----------KRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 139 -~~~~D~v~~~~~l~~~--------~~-----------~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
.+..|+++.+...... .+ ...+++.+.+.++++|.++.+.
T Consensus 79 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~s 138 (276)
T 1wma_A 79 EYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVS 138 (276)
T ss_dssp HHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred hcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEEC
Confidence 1368999876543321 11 1234556666666677776653
No 420
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=86.64 E-value=5.6 Score=30.57 Aligned_cols=106 Identities=17% Similarity=0.177 Sum_probs=63.0
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCceEEEEeC-ChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-----C----
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDF-SKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----F---- 137 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~-s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~---- 137 (257)
.++++|=.|++ |.+...+++.+ ..+.+|..++. +.+..+...+.+...+ .++.++..|+.+.. +
T Consensus 17 ~~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~ 91 (270)
T 3is3_A 17 DGKVALVTGSG-RGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG----SDAIAIKADIRQVPEIVKLFDQAV 91 (270)
T ss_dssp TTCEEEESCTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT----CCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC----CcEEEEEcCCCCHHHHHHHHHHHH
Confidence 35577777754 44555444433 23678888775 3444555544444332 57889999998742 0
Q ss_pred -CCCcccEEEecccccCcc--------c-----------HHHHHHHHHhcccCCCEEEEEee
Q 025144 138 -SDCFFDAITMGYGLRNVV--------D-----------KRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 138 -~~~~~D~v~~~~~l~~~~--------~-----------~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
..+..|+++.+....... + ...+.+.+.+.++++|.++.+..
T Consensus 92 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 92 AHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp HHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 014689999766543221 1 12345667777888888877643
No 421
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=86.52 E-value=3.8 Score=30.42 Aligned_cols=91 Identities=8% Similarity=-0.006 Sum_probs=54.3
Q ss_pred eEEEecCCCChhHHHHHHHh-CCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC----CCCCcccEEE
Q 025144 72 NVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----FSDCFFDAIT 146 (257)
Q Consensus 72 ~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~D~v~ 146 (257)
+|+=+|+ |..+..+++.+ ..+.+|+++|.+++.++...+. .+..++.+|..+.. ..-..+|+|+
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~---------~~~~~i~gd~~~~~~l~~a~i~~ad~vi 70 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK---------LKATIIHGDGSHKEILRDAEVSKNDVVV 70 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH---------SSSEEEESCTTSHHHHHHHTCCTTCEEE
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH---------cCCeEEEcCCCCHHHHHhcCcccCCEEE
Confidence 4666765 56666665543 2367999999999877765433 35678999987632 1124689988
Q ss_pred ecccccCcccHHHHHHHHHhcccCCCEEEE
Q 025144 147 MGYGLRNVVDKRKALEESFRVLKPGSRISV 176 (257)
Q Consensus 147 ~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~ 176 (257)
+...- +.....+....+.+.+...++.
T Consensus 71 ~~~~~---d~~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 71 ILTPR---DEVNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp ECCSC---HHHHHHHHHHHHHTSCCCEEEE
T ss_pred EecCC---cHHHHHHHHHHHHHcCCCeEEE
Confidence 64321 1123334444454555555543
No 422
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=86.50 E-value=3.3 Score=32.21 Aligned_cols=102 Identities=13% Similarity=0.148 Sum_probs=64.5
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC----------C
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----------F 137 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~----------~ 137 (257)
.++.+|=-|++.| +...+++.+ ..+++|..+|.+++.++.+.+.+ + .+...+.+|+.+.. -
T Consensus 28 ~gKvalVTGas~G-IG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g----~~~~~~~~Dv~~~~~v~~~~~~~~~ 99 (273)
T 4fgs_A 28 NAKIAVITGATSG-IGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---G----GGAVGIQADSANLAELDRLYEKVKA 99 (273)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C----TTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---C----CCeEEEEecCCCHHHHHHHHHHHHH
Confidence 4666777776554 444443332 23789999999998877665544 2 46788899998742 0
Q ss_pred CCCcccEEEecccccCc------c--c-----------HHHHHHHHHhcccCCCEEEEEe
Q 025144 138 SDCFFDAITMGYGLRNV------V--D-----------KRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 138 ~~~~~D~v~~~~~l~~~------~--~-----------~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
.-+..|+++.+...... + + .-.+.+.+.+.++.+|.++.+.
T Consensus 100 ~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInis 159 (273)
T 4fgs_A 100 EAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTG 159 (273)
T ss_dssp HHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEC
T ss_pred HcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 12578999976654322 1 1 1233566777788888876654
No 423
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=86.33 E-value=5.1 Score=31.35 Aligned_cols=105 Identities=13% Similarity=0.085 Sum_probs=63.7
Q ss_pred CCCeEEEecCCC-ChhHHHHHHHh-CCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-----CC---
Q 025144 69 TGDNVLDVCCGS-GDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----FS--- 138 (257)
Q Consensus 69 ~~~~vLdiG~G~-G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~--- 138 (257)
.++++|=.|++. ..+...+++.+ ..+.+|..+|.+++..+.+.+..... .++.++.+|+.+.. +.
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~ 103 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL-----GVKLTVPCDVSDAESVDNMFKVLA 103 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH-----TCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-----CCeEEEEcCCCCHHHHHHHHHHHH
Confidence 356788888753 23433333332 23679999999876655555444332 35788999998742 00
Q ss_pred --CCcccEEEecccccCc-------c-----c-----------HHHHHHHHHhcccCCCEEEEEe
Q 025144 139 --DCFFDAITMGYGLRNV-------V-----D-----------KRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 139 --~~~~D~v~~~~~l~~~-------~-----~-----------~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
.+..|+++.+...... . + ...+++.+.+.++++|.++.+.
T Consensus 104 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~is 168 (296)
T 3k31_A 104 EEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLS 168 (296)
T ss_dssp HHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred HHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEE
Confidence 1468999987665321 1 1 1234566677777788887764
No 424
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=85.81 E-value=0.36 Score=40.06 Aligned_cols=41 Identities=12% Similarity=0.090 Sum_probs=32.0
Q ss_pred CCCeEEEecCCC-ChhHHHHHHHhCCCceEEEEeCChhHHHHHH
Q 025144 69 TGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMAS 111 (257)
Q Consensus 69 ~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~ 111 (257)
++.+|+=+|+|. |..+..++..+ +.+|+++|.++..++.++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~--Ga~V~v~D~~~~~~~~~~ 212 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSL--GAIVRAFDTRPEVKEQVQ 212 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCGGGHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHH
Confidence 467999999985 66666777665 568999999998777664
No 425
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=85.58 E-value=5.5 Score=30.46 Aligned_cols=82 Identities=15% Similarity=0.125 Sum_probs=49.6
Q ss_pred CCeEEEecCCCChhHHHHHHHh-CCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-----CC-----
Q 025144 70 GDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----FS----- 138 (257)
Q Consensus 70 ~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~----- 138 (257)
++++|=.|+ +|.+...+++.+ ..+.+|++++.+++..+...+.+...... .++.++.+|+.+.. +.
T Consensus 7 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (267)
T 2gdz_A 7 GKVALVTGA-AQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEP--QKTLFIQCDVADQQQLRDTFRKVVDH 83 (267)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCG--GGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEECC-CCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCC--CceEEEecCCCCHHHHHHHHHHHHHH
Confidence 457777775 555555555443 23679999999887665544443221101 36788999988742 00
Q ss_pred CCcccEEEecccccCc
Q 025144 139 DCFFDAITMGYGLRNV 154 (257)
Q Consensus 139 ~~~~D~v~~~~~l~~~ 154 (257)
.+..|+++.+......
T Consensus 84 ~g~id~lv~~Ag~~~~ 99 (267)
T 2gdz_A 84 FGRLDILVNNAGVNNE 99 (267)
T ss_dssp HSCCCEEEECCCCCCS
T ss_pred cCCCCEEEECCCCCCh
Confidence 1357999987765433
No 426
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=85.58 E-value=5.5 Score=30.78 Aligned_cols=78 Identities=14% Similarity=0.110 Sum_probs=51.3
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCC---------C
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF---------S 138 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~---------~ 138 (257)
.++++|=.|+ +|.+...+++.+ ..+.+|+.+|.+++.++.+.+.+...+ .++.++..|+.+... .
T Consensus 32 ~gk~~lVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~~~~~~~~~~~ 106 (275)
T 4imr_A 32 RGRTALVTGS-SRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASG----GTAQELAGDLSEAGAGTDLIERAEA 106 (275)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTT----CCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC----CeEEEEEecCCCHHHHHHHHHHHHH
Confidence 3556776665 455555554443 236799999998877776666554332 578899999987530 0
Q ss_pred CCcccEEEecccc
Q 025144 139 DCFFDAITMGYGL 151 (257)
Q Consensus 139 ~~~~D~v~~~~~l 151 (257)
.+..|+++.+...
T Consensus 107 ~g~iD~lvnnAg~ 119 (275)
T 4imr_A 107 IAPVDILVINASA 119 (275)
T ss_dssp HSCCCEEEECCCC
T ss_pred hCCCCEEEECCCC
Confidence 1468999987664
No 427
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=85.48 E-value=8.2 Score=29.70 Aligned_cols=105 Identities=13% Similarity=0.111 Sum_probs=62.3
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCceEEEEeCC-hhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-----C----
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFS-KNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----F---- 137 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s-~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~---- 137 (257)
.++++|=.|++. .+...+++.+ ..+.+|..++.+ .+..+...+.+...+ .++.++.+|+.+.. +
T Consensus 30 ~gk~~lVTGas~-GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~ 104 (271)
T 3v2g_A 30 AGKTAFVTGGSR-GIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAG----GRAVAIRADNRDAEAIEQAIRETV 104 (271)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT----CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC----CcEEEEECCCCCHHHHHHHHHHHH
Confidence 456788777654 4444444433 236788888654 344444444443322 57889999998742 0
Q ss_pred -CCCcccEEEecccccCcc--------c-----------HHHHHHHHHhcccCCCEEEEEe
Q 025144 138 -SDCFFDAITMGYGLRNVV--------D-----------KRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 138 -~~~~~D~v~~~~~l~~~~--------~-----------~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
..+..|+++.+....... + ...+++.+.+.++++|.++.+.
T Consensus 105 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~is 165 (271)
T 3v2g_A 105 EALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIG 165 (271)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 014689999776543221 1 1234666777778888887664
No 428
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=85.40 E-value=2.9 Score=32.05 Aligned_cols=105 Identities=9% Similarity=0.064 Sum_probs=62.0
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCceEEEE-eCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-----C----
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGL-DFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----F---- 137 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~-D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~---- 137 (257)
.++++|=.|++. .+...+++.+ ..+.+|..+ +.+++..+...+.+...+ .++.++.+|+.+.. +
T Consensus 7 ~~k~vlVTGas~-GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (259)
T 3edm_A 7 TNRTIVVAGAGR-DIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLG----RSALAIKADLTNAAEVEAAISAAA 81 (259)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTT----SCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCc-hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC----CceEEEEcCCCCHHHHHHHHHHHH
Confidence 356778777654 4444444433 236788888 666666665555544332 57889999998742 0
Q ss_pred -CCCcccEEEeccccc-C---ccc----------------HHHHHHHHHhcccCCCEEEEEe
Q 025144 138 -SDCFFDAITMGYGLR-N---VVD----------------KRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 138 -~~~~~D~v~~~~~l~-~---~~~----------------~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
..+..|+++.+.... . +.+ ...+.+.+.+.++++|.++.+.
T Consensus 82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 143 (259)
T 3edm_A 82 DKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFS 143 (259)
T ss_dssp HHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred HHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEc
Confidence 014689999766432 1 111 1234556666777778776654
No 429
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=85.36 E-value=7.2 Score=28.64 Aligned_cols=95 Identities=7% Similarity=-0.014 Sum_probs=58.0
Q ss_pred eEEEecCCCChhHHHHHHHh-CCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCC-CCCcccEEEecc
Q 025144 72 NVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF-SDCFFDAITMGY 149 (257)
Q Consensus 72 ~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~D~v~~~~ 149 (257)
+||=.| |+|.....+++.+ ..+.+|++++.++..+.... . .++.++.+|+.+... .-+.+|+|+.+.
T Consensus 2 kilVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~----~~~~~~~~D~~d~~~~~~~~~d~vi~~a 70 (224)
T 3h2s_A 2 KIAVLG-ATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL------G----ATVATLVKEPLVLTEADLDSVDAVVDAL 70 (224)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT------C----TTSEEEECCGGGCCHHHHTTCSEEEECC
T ss_pred EEEEEc-CCCHHHHHHHHHHHHCCCEEEEEEeccccccccc------C----CCceEEecccccccHhhcccCCEEEECC
Confidence 466666 5677777766654 23679999998876544221 1 478899999987531 113589999766
Q ss_pred cccCc----ccHHHHHHHHHhcccC-CCEEEEE
Q 025144 150 GLRNV----VDKRKALEESFRVLKP-GSRISVL 177 (257)
Q Consensus 150 ~l~~~----~~~~~~l~~~~~~Lk~-gG~l~~~ 177 (257)
...+. ........++.+.++. |+.+++.
T Consensus 71 g~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~ 103 (224)
T 3h2s_A 71 SVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFI 103 (224)
T ss_dssp CCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEE
T ss_pred ccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEE
Confidence 55321 1123345566666654 4566555
No 430
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=85.07 E-value=3.2 Score=35.38 Aligned_cols=91 Identities=12% Similarity=0.070 Sum_probs=55.5
Q ss_pred CCCCCeEEEecCCC-ChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEE
Q 025144 67 AKTGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAI 145 (257)
Q Consensus 67 ~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v 145 (257)
..++.+|+=+|+|. |......++.+ +.+|+++|.++...+.+.+. ...+ .+..+. . ...|+|
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~--Ga~Viv~d~~~~~~~~A~~~----------Ga~~--~~l~e~-l--~~aDvV 333 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQ--GARVSVTEIDPINALQAMME----------GFDV--VTVEEA-I--GDADIV 333 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT----------TCEE--CCHHHH-G--GGCSEE
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHc----------CCEE--ecHHHH-H--hCCCEE
Confidence 46788999999874 65555666654 57999999999876665432 1221 122121 1 357999
Q ss_pred EecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 146 TMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 146 ~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
+..-.-.++-+ ....+.+|+||.++....
T Consensus 334 i~atgt~~~i~-----~~~l~~mk~ggilvnvG~ 362 (494)
T 3ce6_A 334 VTATGNKDIIM-----LEHIKAMKDHAILGNIGH 362 (494)
T ss_dssp EECSSSSCSBC-----HHHHHHSCTTCEEEECSS
T ss_pred EECCCCHHHHH-----HHHHHhcCCCcEEEEeCC
Confidence 87533222111 245566899998865543
No 431
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=85.03 E-value=6.7 Score=26.26 Aligned_cols=91 Identities=11% Similarity=0.060 Sum_probs=51.1
Q ss_pred CeEEEecCCCChhHHHHHHHh-CCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC----CCCCcccEE
Q 025144 71 DNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----FSDCFFDAI 145 (257)
Q Consensus 71 ~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~D~v 145 (257)
.+|+=+|+ |..+..+++.+ ..+.+++++|.+++.++..++. ..+.++.+|..+.. ..-..+|+|
T Consensus 5 m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~---------~~~~~~~~d~~~~~~l~~~~~~~~d~v 73 (140)
T 1lss_A 5 MYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE---------IDALVINGDCTKIKTLEDAGIEDADMY 73 (140)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---------CSSEEEESCTTSHHHHHHTTTTTCSEE
T ss_pred CEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh---------cCcEEEEcCCCCHHHHHHcCcccCCEE
Confidence 47888877 55555444433 1357899999988766655432 24556667765421 112458998
Q ss_pred EecccccCcccHHHHHHHHHhcccCCCEEEE
Q 025144 146 TMGYGLRNVVDKRKALEESFRVLKPGSRISV 176 (257)
Q Consensus 146 ~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~ 176 (257)
+..-.-. .....+..+.+.+.++ .+++
T Consensus 74 i~~~~~~---~~~~~~~~~~~~~~~~-~ii~ 100 (140)
T 1lss_A 74 IAVTGKE---EVNLMSSLLAKSYGIN-KTIA 100 (140)
T ss_dssp EECCSCH---HHHHHHHHHHHHTTCC-CEEE
T ss_pred EEeeCCc---hHHHHHHHHHHHcCCC-EEEE
Confidence 8753211 2223344455556665 4443
No 432
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=85.02 E-value=5.9 Score=30.93 Aligned_cols=105 Identities=11% Similarity=0.047 Sum_probs=62.4
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCceEEEEeCCh--hHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-----C---
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSK--NQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----F--- 137 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~--~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~--- 137 (257)
.++++|=.|++ |.+...+++.+ ..+.+|..++.+. ...+...+.....+ .++.++.+|+.+.. +
T Consensus 48 ~~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~ 122 (294)
T 3r3s_A 48 KDRKALVTGGD-SGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG----RKAVLLPGDLSDESFARSLVHKA 122 (294)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTT----CCEEECCCCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcC----CcEEEEEecCCCHHHHHHHHHHH
Confidence 35677877754 45555554433 2367899998763 33444444333322 57888899988742 0
Q ss_pred --CCCcccEEEecccccC----ccc----------------HHHHHHHHHhcccCCCEEEEEe
Q 025144 138 --SDCFFDAITMGYGLRN----VVD----------------KRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 138 --~~~~~D~v~~~~~l~~----~~~----------------~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
..+..|+++.+..... +.+ ...+++.+.+.++++|.++.+.
T Consensus 123 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~is 185 (294)
T 3r3s_A 123 REALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTS 185 (294)
T ss_dssp HHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEEC
Confidence 0146899997766432 111 1234666777788888887754
No 433
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=84.83 E-value=9.3 Score=30.75 Aligned_cols=97 Identities=12% Similarity=0.099 Sum_probs=54.2
Q ss_pred hhCCCCCCeEEEecC--CCChhHHHHHHHhCCCceEEE-EeCChh---HHHHHHhhhhhhhhccCCCeeEEEc------c
Q 025144 64 WSGAKTGDNVLDVCC--GSGDLSFLLSEQVGSQGKVIG-LDFSKN---QLSMASSRQDLVSKACYKNIEWVEG------D 131 (257)
Q Consensus 64 ~~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~~v~~-~D~s~~---~~~~a~~~~~~~~~~~~~~~~~~~~------d 131 (257)
..+..++.+||-+|+ |.|..+..+++.. +.++++ ++.++. ..+.+++. + --.++.. +
T Consensus 162 ~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~--Ga~vi~~~~~~~~~~~~~~~~~~l----G-----a~~vi~~~~~~~~~ 230 (357)
T 1zsy_A 162 FEQLQPGDSVIQNASNSGVGQAVIQIAAAL--GLRTINVVRDRPDIQKLSDRLKSL----G-----AEHVITEEELRRPE 230 (357)
T ss_dssp SSCCCTTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEECCCSCHHHHHHHHHHT----T-----CSEEEEHHHHHSGG
T ss_pred HhccCCCCEEEEeCCcCHHHHHHHHHHHHc--CCEEEEEecCccchHHHHHHHHhc----C-----CcEEEecCcchHHH
Confidence 346788999999997 3588888898886 455554 444432 23334321 1 1112221 1
Q ss_pred CCCCCCCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEe
Q 025144 132 ALDLPFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 132 ~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
+.+..-..+.+|+|+-.-. ... .....+.|+++|.++...
T Consensus 231 ~~~~~~~~~~~Dvvid~~g------~~~-~~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 231 MKNFFKDMPQPRLALNCVG------GKS-STELLRQLARGGTMVTYG 270 (357)
T ss_dssp GGGTTSSSCCCSEEEESSC------HHH-HHHHHTTSCTTCEEEECC
T ss_pred HHHHHhCCCCceEEEECCC------cHH-HHHHHHhhCCCCEEEEEe
Confidence 1111111124899874322 122 245778999999987753
No 434
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=84.37 E-value=2.4 Score=39.42 Aligned_cols=76 Identities=13% Similarity=0.092 Sum_probs=51.8
Q ss_pred CCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCC------------CC--
Q 025144 70 GDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDAL------------DL-- 135 (257)
Q Consensus 70 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~------------~~-- 135 (257)
..+++|+-||.|.++.-+.+. +-...+.++|+++.+.+.-+.+. ++..++..|+. +.
T Consensus 540 ~l~~iDLFaG~GGlslGl~~A-G~~~vv~avEid~~A~~ty~~N~--------p~~~~~~~DI~~l~~~~~~~di~~~~~ 610 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQA-GISDTLWAIEMWDPAAQAFRLNN--------PGSTVFTEDCNILLKLVMAGETTNSRG 610 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHH-TSEEEEEEECSSHHHHHHHHHHC--------TTSEEECSCHHHHHHHHHHTCSBCTTC
T ss_pred CCeEEEeccCccHHHHHHHHC-CCCceEEEEECCHHHHHHHHHhC--------CCCccccccHHHHhhhccchhhhhhhh
Confidence 348999999999999988765 21125789999999888776665 45555655532 11
Q ss_pred -CCC-CCcccEEEecccccCc
Q 025144 136 -PFS-DCFFDAITMGYGLRNV 154 (257)
Q Consensus 136 -~~~-~~~~D~v~~~~~l~~~ 154 (257)
.++ .+.+|+|+.......+
T Consensus 611 ~~lp~~~~vDll~GGpPCQ~F 631 (1002)
T 3swr_A 611 QRLPQKGDVEMLCGGPPCQGF 631 (1002)
T ss_dssp CBCCCTTTCSEEEECCCCTTC
T ss_pred hhcccCCCeeEEEEcCCCcch
Confidence 121 3569999976665544
No 435
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=84.37 E-value=8.3 Score=29.36 Aligned_cols=106 Identities=8% Similarity=0.029 Sum_probs=64.5
Q ss_pred CCCCeEEEecCC-CChhHHHHHHHh-CCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-----C---
Q 025144 68 KTGDNVLDVCCG-SGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----F--- 137 (257)
Q Consensus 68 ~~~~~vLdiG~G-~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~--- 137 (257)
..+++||=.|++ +|.+...+++.+ ..+.+|..++.+....+.+++..... .++.++.+|+.+.. +
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~ 86 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF-----GSELVFPCDVADDAQIDALFASL 86 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHT-----TCCCEEECCTTCHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHc-----CCcEEEECCCCCHHHHHHHHHHH
Confidence 456788988864 245555554443 23679999998866555544443322 46889999998742 0
Q ss_pred --CCCcccEEEecccccC-----------cc--c-----------HHHHHHHHHhcccCCCEEEEEe
Q 025144 138 --SDCFFDAITMGYGLRN-----------VV--D-----------KRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 138 --~~~~~D~v~~~~~l~~-----------~~--~-----------~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
..+..|+++.+..... .+ + ...+++.+.+.++++|.++.+.
T Consensus 87 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 153 (271)
T 3ek2_A 87 KTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLS 153 (271)
T ss_dssp HHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEe
Confidence 1246899997765432 11 1 1234556666777788876654
No 436
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=84.18 E-value=12 Score=28.65 Aligned_cols=79 Identities=15% Similarity=0.081 Sum_probs=49.2
Q ss_pred CCeEEEecCCCChhHHHHHHHh-CCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-----CC-----
Q 025144 70 GDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----FS----- 138 (257)
Q Consensus 70 ~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~----- 138 (257)
++++|=.| |+|.+...+++.+ ..+.+|++++.++..++...+.+...+.. .++.++.+|+.+.. +.
T Consensus 32 ~k~vlVTG-asggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~ 108 (279)
T 1xg5_A 32 DRLALVTG-ASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYP--GTLIPYRCDLSNEEDILSMFSAIRSQ 108 (279)
T ss_dssp TCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCS--SEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCC--ceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 45677776 4566666555543 23679999999887766655544332211 35778899988742 00
Q ss_pred CCcccEEEecccc
Q 025144 139 DCFFDAITMGYGL 151 (257)
Q Consensus 139 ~~~~D~v~~~~~l 151 (257)
.+.+|+++.+...
T Consensus 109 ~g~iD~vi~~Ag~ 121 (279)
T 1xg5_A 109 HSGVDICINNAGL 121 (279)
T ss_dssp HCCCSEEEECCCC
T ss_pred CCCCCEEEECCCC
Confidence 1368999976654
No 437
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=83.91 E-value=12 Score=28.51 Aligned_cols=79 Identities=9% Similarity=-0.002 Sum_probs=45.2
Q ss_pred CCCeEEEecCCC-ChhHHHHHHHh-CCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC----------
Q 025144 69 TGDNVLDVCCGS-GDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP---------- 136 (257)
Q Consensus 69 ~~~~vLdiG~G~-G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~---------- 136 (257)
.++++|=.|++. |.+...+++.+ ..+.+|+.++.++...+.+++ +.... .+..++.+|+.+..
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~----~~~~~~~~D~~~~~~v~~~~~~~~ 82 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEE-FAAQL----GSDIVLQCDVAEDASIDTMFAELG 82 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHH-HHHHT----TCCCEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHH-HHHhc----CCcEEEEccCCCHHHHHHHHHHHH
Confidence 356788888652 55555555543 236789999987622222221 21111 23478888988742
Q ss_pred CCCCcccEEEeccccc
Q 025144 137 FSDCFFDAITMGYGLR 152 (257)
Q Consensus 137 ~~~~~~D~v~~~~~l~ 152 (257)
-..+..|+++.+....
T Consensus 83 ~~~g~iD~lv~~Ag~~ 98 (265)
T 1qsg_A 83 KVWPKFDGFVHSIGFA 98 (265)
T ss_dssp TTCSSEEEEEECCCCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 1124689999876543
No 438
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=83.61 E-value=2.8 Score=33.73 Aligned_cols=90 Identities=9% Similarity=-0.018 Sum_probs=55.3
Q ss_pred CeEEEe-cCC-CChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC------CCCCcc
Q 025144 71 DNVLDV-CCG-SGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP------FSDCFF 142 (257)
Q Consensus 71 ~~vLdi-G~G-~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~------~~~~~~ 142 (257)
.+||=. |+| .|..+..+++.. +++|+++|.+++-++.+++. + --.++..+-.++. .....+
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~~----G-----a~~~~~~~~~~~~~~v~~~~~~~g~ 234 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEE--GFRPIVTVRRDEQIALLKDI----G-----AAHVLNEKAPDFEATLREVMKAEQP 234 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESCGGGHHHHHHH----T-----CSEEEETTSTTHHHHHHHHHHHHCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHc----C-----CCEEEECCcHHHHHHHHHHhcCCCC
Confidence 466654 333 467777778775 57999999999888877643 1 1123322222210 011359
Q ss_pred cEEEecccccCcccHHHHHHHHHhcccCCCEEEEEe
Q 025144 143 DAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 143 D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
|+|+-... ...+....+.|+++|.+++..
T Consensus 235 D~vid~~g-------~~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 235 RIFLDAVT-------GPLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp CEEEESSC-------HHHHHHHHHHSCTTCEEEECC
T ss_pred cEEEECCC-------ChhHHHHHhhhcCCCEEEEEe
Confidence 99985432 123467788999999998764
No 439
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=83.11 E-value=2.1 Score=34.48 Aligned_cols=97 Identities=18% Similarity=0.113 Sum_probs=55.2
Q ss_pred hhhCCCCCCeEEEecC-C-CChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC-----
Q 025144 63 SWSGAKTGDNVLDVCC-G-SGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL----- 135 (257)
Q Consensus 63 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~----- 135 (257)
+..+..++.+||=.|+ | .|..+..+++.. ....|++++ +++-.+.++ . + --.++. +-.++
T Consensus 136 ~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~-g~~~V~~~~-~~~~~~~~~--~---g-----a~~~~~-~~~~~~~~~~ 202 (349)
T 4a27_A 136 EVANLREGMSVLVHSAGGGVGQAVAQLCSTV-PNVTVFGTA-STFKHEAIK--D---S-----VTHLFD-RNADYVQEVK 202 (349)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHTTS-TTCEEEEEE-CGGGHHHHG--G---G-----SSEEEE-TTSCHHHHHH
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHc-CCcEEEEeC-CHHHHHHHH--c---C-----CcEEEc-CCccHHHHHH
Confidence 4456788999999998 3 467777777653 246888888 555445443 1 1 112222 21111
Q ss_pred CCCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 136 PFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 136 ~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
....+.+|+|+-.-.- ..+....+.|+++|.+++...
T Consensus 203 ~~~~~g~Dvv~d~~g~-------~~~~~~~~~l~~~G~~v~~G~ 239 (349)
T 4a27_A 203 RISAEGVDIVLDCLCG-------DNTGKGLSLLKPLGTYILYGS 239 (349)
T ss_dssp HHCTTCEEEEEEECC--------------CTTEEEEEEEEEEC-
T ss_pred HhcCCCceEEEECCCc-------hhHHHHHHHhhcCCEEEEECC
Confidence 0123579999853321 123567889999999987643
No 440
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=82.90 E-value=4.7 Score=32.20 Aligned_cols=88 Identities=11% Similarity=0.081 Sum_probs=54.7
Q ss_pred CeEEEecCCCChhHHHHHHHh-CCCceEEEEeCCh----hHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-----CCCC
Q 025144 71 DNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSK----NQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----FSDC 140 (257)
Q Consensus 71 ~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~----~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~~~ 140 (257)
.+||=.| |+|..+..+++.+ ..+.+|++++-++ ........ +. . .++.++.+|+.+.. +...
T Consensus 11 ~~IlVtG-atG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~-l~--~----~~v~~~~~Dl~d~~~l~~~~~~~ 82 (346)
T 3i6i_A 11 GRVLIAG-ATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKA-LE--D----KGAIIVYGLINEQEAMEKILKEH 82 (346)
T ss_dssp CCEEEEC-TTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHH-HH--H----TTCEEEECCTTCHHHHHHHHHHT
T ss_pred CeEEEEC-CCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHH-HH--h----CCcEEEEeecCCHHHHHHHHhhC
Confidence 4788777 5777777776654 2357899998765 22222211 11 1 58899999998742 2112
Q ss_pred cccEEEecccccCcccHHHHHHHHHh
Q 025144 141 FFDAITMGYGLRNVVDKRKALEESFR 166 (257)
Q Consensus 141 ~~D~v~~~~~l~~~~~~~~~l~~~~~ 166 (257)
.+|+|+......+......+++.+.+
T Consensus 83 ~~d~Vi~~a~~~n~~~~~~l~~aa~~ 108 (346)
T 3i6i_A 83 EIDIVVSTVGGESILDQIALVKAMKA 108 (346)
T ss_dssp TCCEEEECCCGGGGGGHHHHHHHHHH
T ss_pred CCCEEEECCchhhHHHHHHHHHHHHH
Confidence 68999987766555555555555544
No 441
>1ej6_A Lambda2; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_U
Probab=82.63 E-value=1.1 Score=41.40 Aligned_cols=103 Identities=18% Similarity=0.190 Sum_probs=69.4
Q ss_pred CCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCC-CCCcccEE
Q 025144 67 AKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF-SDCFFDAI 145 (257)
Q Consensus 67 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~D~v 145 (257)
...+..+||+|.|.-.-...|. ++...|+.+|.-|.. +....+. ..-.+++.|...... ....+|.|
T Consensus 819 ~~~~~~~lDlGTGPE~RiLsLi---P~~~pvtm~D~RP~a-----e~~~~w~----~~T~f~~~DyL~~~~~~~~~~D~v 886 (1289)
T 1ej6_A 819 VYDGDVVLDLGTGPEAKILELI---PATSPVTCVDIRPTA-----QPSGCWN----VRTTFLELDYLSDGWITGVRGDIV 886 (1289)
T ss_dssp CCTTCCEEEESCCSSCGGGGTS---CTTSCEEEEESSCCC-----SCSTTBS----SCEEEEESCTTSSSCGGGCCCSEE
T ss_pred ecccceEEEccCCCcceeeeec---CCCCceEEecccCch-----hhhcccc----ccceeeEccccccceeecCCCcEE
Confidence 3456799999999865444443 667899999986632 1111111 568899999987542 23469999
Q ss_pred EecccccCc-----ccHHHHHHHHHhcccCCC-EEEEEeecC
Q 025144 146 TMGYGLRNV-----VDKRKALEESFRVLKPGS-RISVLDFNK 181 (257)
Q Consensus 146 ~~~~~l~~~-----~~~~~~l~~~~~~Lk~gG-~l~~~~~~~ 181 (257)
.|.++|... -+....++++.+.+++.| .-++...+.
T Consensus 887 t~i~SLGAA~A~a~~tl~~~~~q~l~~~~~~~~~~l~lQlNc 928 (1289)
T 1ej6_A 887 TCMLSLGAAAAGKSMTFDAAFQQLIKVLSKSTANVVLVQVNC 928 (1289)
T ss_dssp EECSCHHHHHHHHTCCHHHHHHHHHHHHHTSCCSEEEEECCC
T ss_pred EEEeechhhhhccCCcHHHHHHHHHHHHHhcCccEEEEEecC
Confidence 999887755 257788888888887755 344444443
No 442
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=82.49 E-value=3 Score=32.49 Aligned_cols=97 Identities=14% Similarity=0.072 Sum_probs=53.9
Q ss_pred CeEEEecCCC-ChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhh----c-----------cCCCeeEEEccCCC
Q 025144 71 DNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSK----A-----------CYKNIEWVEGDALD 134 (257)
Q Consensus 71 ~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~----~-----------~~~~~~~~~~d~~~ 134 (257)
.+|.=||+|. |......+.. .+.+|+++|.+++.++.+.+.+..... . ...++.. ..|..+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~--~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~~ 81 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAF--HGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLAQ 81 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHHH
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHHH
Confidence 4788888875 4333222223 367999999999998887765321100 0 0001222 223222
Q ss_pred CCCCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEE
Q 025144 135 LPFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRI 174 (257)
Q Consensus 135 ~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l 174 (257)
. -...|+|+..-. ...+....+++++...++++..+
T Consensus 82 ~---~~~aDlVi~av~-~~~~~~~~v~~~l~~~~~~~~il 117 (283)
T 4e12_A 82 A---VKDADLVIEAVP-ESLDLKRDIYTKLGELAPAKTIF 117 (283)
T ss_dssp H---TTTCSEEEECCC-SCHHHHHHHHHHHHHHSCTTCEE
T ss_pred H---hccCCEEEEecc-CcHHHHHHHHHHHHhhCCCCcEE
Confidence 1 134799886432 22223456778888888887755
No 443
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=82.42 E-value=9.7 Score=29.87 Aligned_cols=89 Identities=12% Similarity=-0.039 Sum_probs=51.8
Q ss_pred CCCCeEEEecCCC-ChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEE-ccCCCCCCCCCcccEE
Q 025144 68 KTGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVE-GDALDLPFSDCFFDAI 145 (257)
Q Consensus 68 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~D~v 145 (257)
-.+.+|+=+|+|. |......+..+ +.+|+++|.+++..+.+.+. ...... .+..+. -...|+|
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~~~--G~~V~~~d~~~~~~~~~~~~----------g~~~~~~~~l~~~---l~~aDvV 219 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFAAL--GANVKVGARSSAHLARITEM----------GLVPFHTDELKEH---VKDIDIC 219 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHT----------TCEEEEGGGHHHH---STTCSEE
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHC----------CCeEEchhhHHHH---hhCCCEE
Confidence 4577999999864 44444444443 56999999988654433221 122221 222221 1358999
Q ss_pred EecccccCcccHHHHHHHHHhcccCCCEEEEE
Q 025144 146 TMGYGLRNVVDKRKALEESFRVLKPGSRISVL 177 (257)
Q Consensus 146 ~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~ 177 (257)
+..-..+.+.. ...+.+|||+.++-.
T Consensus 220 i~~~p~~~i~~------~~~~~mk~g~~lin~ 245 (300)
T 2rir_A 220 INTIPSMILNQ------TVLSSMTPKTLILDL 245 (300)
T ss_dssp EECCSSCCBCH------HHHTTSCTTCEEEEC
T ss_pred EECCChhhhCH------HHHHhCCCCCEEEEE
Confidence 98776654432 234678998876443
No 444
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=82.36 E-value=10 Score=29.30 Aligned_cols=76 Identities=12% Similarity=0.136 Sum_probs=49.0
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-----C-----
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----F----- 137 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~----- 137 (257)
.++++|=.|++. .+...+++.+ ..+.+|+.+|.+++.++.+.+.+ + .++.++..|+.+.. +
T Consensus 28 ~gk~vlVTGas~-gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~----~~~~~~~~Dv~d~~~v~~~~~~~~~ 99 (277)
T 3gvc_A 28 AGKVAIVTGAGA-GIGLAVARRLADEGCHVLCADIDGDAADAAATKI---G----CGAAACRVDVSDEQQIIAMVDACVA 99 (277)
T ss_dssp TTCEEEETTTTS-THHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---C----SSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C----CcceEEEecCCCHHHHHHHHHHHHH
Confidence 355677777554 4444444432 23679999999987776655544 1 57889999998742 0
Q ss_pred CCCcccEEEeccccc
Q 025144 138 SDCFFDAITMGYGLR 152 (257)
Q Consensus 138 ~~~~~D~v~~~~~l~ 152 (257)
..+..|+++.+....
T Consensus 100 ~~g~iD~lvnnAg~~ 114 (277)
T 3gvc_A 100 AFGGVDKLVANAGVV 114 (277)
T ss_dssp HHSSCCEEEECCCCC
T ss_pred HcCCCCEEEECCCCC
Confidence 014689999776653
No 445
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=82.25 E-value=9.4 Score=29.37 Aligned_cols=84 Identities=19% Similarity=0.061 Sum_probs=47.9
Q ss_pred eEEEecCCC-Chh-HHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEecc
Q 025144 72 NVLDVCCGS-GDL-SFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMGY 149 (257)
Q Consensus 72 ~vLdiG~G~-G~~-~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 149 (257)
+|.=||+|. |.. +..+.+ .+.+|+++|.+++.++.+.+. + .... ...|..+. ...|+|+..-
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~---~g~~V~~~~~~~~~~~~~~~~----g----~~~~-~~~~~~~~----~~~D~vi~av 65 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRR---RGHYLIGVSRQQSTCEKAVER----Q----LVDE-AGQDLSLL----QTAKIIFLCT 65 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHHT----T----SCSE-EESCGGGG----TTCSEEEECS
T ss_pred EEEEEcCcHHHHHHHHHHHH---CCCEEEEEECCHHHHHHHHhC----C----CCcc-ccCCHHHh----CCCCEEEEEC
Confidence 577788764 332 223332 246899999998877665432 1 0111 12233222 3579998754
Q ss_pred cccCcccHHHHHHHHHhcccCCCEE
Q 025144 150 GLRNVVDKRKALEESFRVLKPGSRI 174 (257)
Q Consensus 150 ~l~~~~~~~~~l~~~~~~Lk~gG~l 174 (257)
.-. ....+++.+...++++..+
T Consensus 66 ~~~---~~~~~~~~l~~~~~~~~~v 87 (279)
T 2f1k_A 66 PIQ---LILPTLEKLIPHLSPTAIV 87 (279)
T ss_dssp CHH---HHHHHHHHHGGGSCTTCEE
T ss_pred CHH---HHHHHHHHHHhhCCCCCEE
Confidence 322 3456777888888887654
No 446
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=82.22 E-value=5.3 Score=32.81 Aligned_cols=83 Identities=13% Similarity=0.108 Sum_probs=54.1
Q ss_pred CCeEEEecCCCChhHHHHHHHh-CCC-ceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-----CCCCcc
Q 025144 70 GDNVLDVCCGSGDLSFLLSEQV-GSQ-GKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----FSDCFF 142 (257)
Q Consensus 70 ~~~vLdiG~G~G~~~~~l~~~~-~~~-~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~~~~~ 142 (257)
+.+||=.| |+|..+..+++.+ ..+ .+|+++|.++..+......+.........++.++.+|+.+.. +....+
T Consensus 35 ~k~vLVTG-atG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~ 113 (399)
T 3nzo_A 35 QSRFLVLG-GAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQY 113 (399)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCCC
T ss_pred CCEEEEEc-CChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCCC
Confidence 45788777 5788888777765 234 589999999877766555443221111147889999998742 123568
Q ss_pred cEEEecccccC
Q 025144 143 DAITMGYGLRN 153 (257)
Q Consensus 143 D~v~~~~~l~~ 153 (257)
|+|+......+
T Consensus 114 D~Vih~Aa~~~ 124 (399)
T 3nzo_A 114 DYVLNLSALKH 124 (399)
T ss_dssp SEEEECCCCCC
T ss_pred CEEEECCCcCC
Confidence 99997655443
No 447
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=81.99 E-value=9.8 Score=29.50 Aligned_cols=89 Identities=16% Similarity=0.196 Sum_probs=50.7
Q ss_pred CeEEEecCCC-Ch-hHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEec
Q 025144 71 DNVLDVCCGS-GD-LSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMG 148 (257)
Q Consensus 71 ~~vLdiG~G~-G~-~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 148 (257)
.+|.=||+|. |. ++..+.+. +.+.+|+++|.+++.++.+.+. + .......|..+. -...|+|+..
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~-g~~~~V~~~d~~~~~~~~~~~~----g-----~~~~~~~~~~~~---~~~aDvVila 73 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRD-HPHYKIVGYNRSDRSRDIALER----G-----IVDEATADFKVF---AALADVIILA 73 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-CTTSEEEEECSSHHHHHHHHHT----T-----SCSEEESCTTTT---GGGCSEEEEC
T ss_pred ceEEEEeeCHHHHHHHHHHHhC-CCCcEEEEEcCCHHHHHHHHHc----C-----CcccccCCHHHh---hcCCCEEEEc
Confidence 4788898775 33 33334433 3356899999998877665432 1 111122233222 1357999875
Q ss_pred ccccCcccHHHHHHHHHhc-ccCCCEEE
Q 025144 149 YGLRNVVDKRKALEESFRV-LKPGSRIS 175 (257)
Q Consensus 149 ~~l~~~~~~~~~l~~~~~~-Lk~gG~l~ 175 (257)
-... ....++..+... ++++..++
T Consensus 74 vp~~---~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 74 VPIK---KTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp SCHH---HHHHHHHHHHTSCCCTTCEEE
T ss_pred CCHH---HHHHHHHHHHhcCCCCCCEEE
Confidence 4322 235667777777 87765443
No 448
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=81.69 E-value=9.9 Score=29.07 Aligned_cols=80 Identities=9% Similarity=-0.010 Sum_probs=50.2
Q ss_pred CCeEEEecCCCChhHHHHHHHh-CCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC------CCCCcc
Q 025144 70 GDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP------FSDCFF 142 (257)
Q Consensus 70 ~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~------~~~~~~ 142 (257)
++++|=.|+ +|.+...+++.+ ..+.+|..+|.+++.++...+.+...... ..+..+..|+.+.. -.-+..
T Consensus 10 ~k~~lVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~g~i 86 (267)
T 3t4x_A 10 GKTALVTGS-TAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPD--AILQPVVADLGTEQGCQDVIEKYPKV 86 (267)
T ss_dssp TCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTT--CEEEEEECCTTSHHHHHHHHHHCCCC
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCC--ceEEEEecCCCCHHHHHHHHHhcCCC
Confidence 456776665 455555554443 23679999999988777666655433211 35778888887632 012468
Q ss_pred cEEEeccccc
Q 025144 143 DAITMGYGLR 152 (257)
Q Consensus 143 D~v~~~~~l~ 152 (257)
|+++.+....
T Consensus 87 d~lv~nAg~~ 96 (267)
T 3t4x_A 87 DILINNLGIF 96 (267)
T ss_dssp SEEEECCCCC
T ss_pred CEEEECCCCC
Confidence 9999766543
No 449
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=81.68 E-value=10 Score=28.92 Aligned_cols=105 Identities=8% Similarity=0.001 Sum_probs=61.3
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCceEEEEeCChh---HHHHHHhhhhhhhhccCCCeeEEEccCCCCC-----C--
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKN---QLSMASSRQDLVSKACYKNIEWVEGDALDLP-----F-- 137 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~---~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~-- 137 (257)
.++++|=.|+ +|.+...+++.+ ..+.+|..++.+.. .++...+.+...+ .++.++..|+.+.. +
T Consensus 10 ~~k~vlVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~ 84 (262)
T 3ksu_A 10 KNKVIVIAGG-IKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQG----AKVALYQSDLSNEEEVAKLFDF 84 (262)
T ss_dssp TTCEEEEETC-SSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTT----CEEEEEECCCCSHHHHHHHHHH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcC----CcEEEEECCCCCHHHHHHHHHH
Confidence 3557776665 455666666654 34678998876543 3333333333222 57889999998742 0
Q ss_pred ---CCCcccEEEecccccCcc--------c-----------HHHHHHHHHhcccCCCEEEEEe
Q 025144 138 ---SDCFFDAITMGYGLRNVV--------D-----------KRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 138 ---~~~~~D~v~~~~~l~~~~--------~-----------~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
..+..|+++.+....... + ...+++.+.+.++++|.++.+.
T Consensus 85 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~is 147 (262)
T 3ksu_A 85 AEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIA 147 (262)
T ss_dssp HHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEe
Confidence 014689999776543221 1 1223555666666778876653
No 450
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=81.64 E-value=3.6 Score=33.72 Aligned_cols=108 Identities=15% Similarity=0.109 Sum_probs=64.6
Q ss_pred HHHHHHHhhhCCCCCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCC
Q 025144 56 IWKRMAVSWSGAKTGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDL 135 (257)
Q Consensus 56 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 135 (257)
...+.+++.+... +.+||.++.+-|.++..+. +..+++.+.-|.......+.+ + -.... ... .
T Consensus 33 ~~~~~l~~~~~~~-~~~~l~~n~~~g~~~~~~~----~~~~~~~~~~~~~~~~~l~~~----~----~~~~~-~~~---~ 95 (381)
T 3dmg_A 33 PVHDLLQKTVEPF-GERALDLNPGVGWGSLPLE----GRMAVERLETSRAAFRCLTAS----G----LQARL-ALP---W 95 (381)
T ss_dssp HHHHHHHTTCCCC-SSEEEESSCTTSTTTGGGB----TTBEEEEEECBHHHHHHHHHT----T----CCCEE-CCG---G
T ss_pred hHHHHHHHHHHHh-CCcEEEecCCCCccccccC----CCCceEEEeCcHHHHHHHHHc----C----CCccc-cCC---c
Confidence 3445555555443 3689999999998776664 346778776555444432221 1 11211 111 1
Q ss_pred CCCCCcccEEEeccccc-CcccHHHHHHHHHhcccCCCEEEEEeec
Q 025144 136 PFSDCFFDAITMGYGLR-NVVDKRKALEESFRVLKPGSRISVLDFN 180 (257)
Q Consensus 136 ~~~~~~~D~v~~~~~l~-~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 180 (257)
..++..||+|++...=+ ........|.++.+.|+|||.+++..-.
T Consensus 96 ~~~~~~~d~v~~~~Pk~k~~~~~~~~l~~~~~~l~~g~~i~~~g~~ 141 (381)
T 3dmg_A 96 EAAAGAYDLVVLALPAGRGTAYVQASLVAAARALRMGGRLYLAGDK 141 (381)
T ss_dssp GSCTTCEEEEEEECCGGGCHHHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred cCCcCCCCEEEEECCcchhHHHHHHHHHHHHHhCCCCCEEEEEEcc
Confidence 22356799998744311 1123467788999999999999876644
No 451
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=81.31 E-value=15 Score=28.79 Aligned_cols=81 Identities=20% Similarity=0.062 Sum_probs=50.0
Q ss_pred CCCCeEEEecCCCChhHHHHHHHh-CCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEE-EccCCCCC-CC--CCcc
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWV-EGDALDLP-FS--DCFF 142 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~-~~d~~~~~-~~--~~~~ 142 (257)
..+.+||=.| |+|.++..+++.+ ..+.+|++++.++...+.....+..... .++.++ .+|+.+.. +. -..+
T Consensus 9 ~~~~~vlVTG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~d~~~~~~~~~~~ 84 (342)
T 1y1p_A 9 PEGSLVLVTG-ANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYP---GRFETAVVEDMLKQGAYDEVIKGA 84 (342)
T ss_dssp CTTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHST---TTEEEEECSCTTSTTTTTTTTTTC
T ss_pred CCCCEEEEEC-CccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCC---CceEEEEecCCcChHHHHHHHcCC
Confidence 3456788776 5777777776654 2357999999887655544433321110 367777 78887643 11 1358
Q ss_pred cEEEeccccc
Q 025144 143 DAITMGYGLR 152 (257)
Q Consensus 143 D~v~~~~~l~ 152 (257)
|+|+......
T Consensus 85 d~vih~A~~~ 94 (342)
T 1y1p_A 85 AGVAHIASVV 94 (342)
T ss_dssp SEEEECCCCC
T ss_pred CEEEEeCCCC
Confidence 9999765543
No 452
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=81.24 E-value=6.1 Score=30.92 Aligned_cols=89 Identities=15% Similarity=-0.041 Sum_probs=51.1
Q ss_pred CCCCeEEEecCCC-ChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEE-ccCCCCCCCCCcccEE
Q 025144 68 KTGDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVE-GDALDLPFSDCFFDAI 145 (257)
Q Consensus 68 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~D~v 145 (257)
-.+.+|+=+|+|. |......+..+ +.+|+++|.+++..+.+.+. ...... .+..+. -...|+|
T Consensus 153 l~g~~v~IiG~G~iG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~----------g~~~~~~~~l~~~---l~~aDvV 217 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSVARKFAAL--GAKVKVGARESDLLARIAEM----------GMEPFHISKAAQE---LRDVDVC 217 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHT----------TSEEEEGGGHHHH---TTTCSEE
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHC----------CCeecChhhHHHH---hcCCCEE
Confidence 4578999999874 44444444443 56999999988655443321 222221 122111 1358999
Q ss_pred EecccccCcccHHHHHHHHHhcccCCCEEEEE
Q 025144 146 TMGYGLRNVVDKRKALEESFRVLKPGSRISVL 177 (257)
Q Consensus 146 ~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~ 177 (257)
+..-..+.+.. ...+.+|||+.++-.
T Consensus 218 i~~~p~~~i~~------~~l~~mk~~~~lin~ 243 (293)
T 3d4o_A 218 INTIPALVVTA------NVLAEMPSHTFVIDL 243 (293)
T ss_dssp EECCSSCCBCH------HHHHHSCTTCEEEEC
T ss_pred EECCChHHhCH------HHHHhcCCCCEEEEe
Confidence 98766544432 233467888876543
No 453
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=81.24 E-value=5.1 Score=30.76 Aligned_cols=103 Identities=14% Similarity=0.224 Sum_probs=61.4
Q ss_pred CCCeEEEecC-CCChhHHHHHHHh-CCCceEEEEeCChhH-HHHHHhhhhhhhhccCCCeeEEEccCCCCC-----CC--
Q 025144 69 TGDNVLDVCC-GSGDLSFLLSEQV-GSQGKVIGLDFSKNQ-LSMASSRQDLVSKACYKNIEWVEGDALDLP-----FS-- 138 (257)
Q Consensus 69 ~~~~vLdiG~-G~G~~~~~l~~~~-~~~~~v~~~D~s~~~-~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~-- 138 (257)
.++++|=.|+ |+|.+...+++.+ ..+.+|+.++.+++. ++...+.+ + .++.++..|+.+.. +.
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~----~~~~~~~~Dv~~~~~v~~~~~~~ 78 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL---P----AKAPLLELDVQNEEHLASLAGRV 78 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS---S----SCCCEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc---C----CCceEEEccCCCHHHHHHHHHHH
Confidence 3567888887 3666666665543 236789999987643 23333222 1 46788899998742 00
Q ss_pred ---CC---cccEEEecccccC--------cc-----cH-----------HHHHHHHHhcccCCCEEEEEe
Q 025144 139 ---DC---FFDAITMGYGLRN--------VV-----DK-----------RKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 139 ---~~---~~D~v~~~~~l~~--------~~-----~~-----------~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
.+ ..|+++.+..... +. +. ..+.+.+.+.++++|.++.+.
T Consensus 79 ~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 148 (269)
T 2h7i_A 79 TEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMD 148 (269)
T ss_dssp HHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEc
Confidence 12 7899997765432 11 11 123555666666678877654
No 454
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=80.98 E-value=8.6 Score=29.56 Aligned_cols=80 Identities=13% Similarity=0.134 Sum_probs=49.7
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCceEEEEeCC------------hhHHHHHHhhhhhhhhccCCCeeEEEccCCCC
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFS------------KNQLSMASSRQDLVSKACYKNIEWVEGDALDL 135 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s------------~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 135 (257)
.++++|=.|++ |.+...+++.+ ..+.+|+++|.+ ++.++...+.+...+ .++.++.+|+.+.
T Consensus 12 ~gk~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~ 86 (278)
T 3sx2_A 12 TGKVAFITGAA-RGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG----SRIVARQADVRDR 86 (278)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT----CCEEEEECCTTCH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcC----CeEEEEeCCCCCH
Confidence 35677777754 44554444433 236799999976 555555444443332 5789999999874
Q ss_pred C-----CC-----CCcccEEEecccccC
Q 025144 136 P-----FS-----DCFFDAITMGYGLRN 153 (257)
Q Consensus 136 ~-----~~-----~~~~D~v~~~~~l~~ 153 (257)
. +. .+..|+++.+.....
T Consensus 87 ~~v~~~~~~~~~~~g~id~lv~nAg~~~ 114 (278)
T 3sx2_A 87 ESLSAALQAGLDELGRLDIVVANAGIAP 114 (278)
T ss_dssp HHHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 2 10 146899998766543
No 455
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=80.88 E-value=0.45 Score=38.13 Aligned_cols=55 Identities=22% Similarity=0.170 Sum_probs=38.5
Q ss_pred CeeEE-EccCCCC--CCCCCcccEEEecccccCc-----------ccHHHHHHHHHhcccCCCEEEEEe
Q 025144 124 NIEWV-EGDALDL--PFSDCFFDAITMGYGLRNV-----------VDKRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 124 ~~~~~-~~d~~~~--~~~~~~~D~v~~~~~l~~~-----------~~~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
...++ ++|..+. .++++++|+|++......- ......+..++++|+|||.+++..
T Consensus 38 ~~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~ 106 (319)
T 1eg2_A 38 TRHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFG 106 (319)
T ss_dssp EEEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 35666 8887642 2456789999987654321 124667888899999999987753
No 456
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=80.70 E-value=15 Score=27.22 Aligned_cols=74 Identities=15% Similarity=0.166 Sum_probs=47.8
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCceEEEEeCChhHHHHHHhhhhhhhhccCCCe-eEEEccCCC-CCCCCCcccEE
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNI-EWVEGDALD-LPFSDCFFDAI 145 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~-~~~~~d~~~-~~~~~~~~D~v 145 (257)
.+.+||=.| |+|..+..+++.+ ..+.+|++++.+++.++.... .++ .++.+|+.+ +.-.-+..|+|
T Consensus 20 ~~~~ilVtG-atG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~----------~~~~~~~~~Dl~~~~~~~~~~~D~v 88 (236)
T 3e8x_A 20 QGMRVLVVG-ANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE----------RGASDIVVANLEEDFSHAFASIDAV 88 (236)
T ss_dssp -CCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----------TTCSEEEECCTTSCCGGGGTTCSEE
T ss_pred CCCeEEEEC-CCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh----------CCCceEEEcccHHHHHHHHcCCCEE
Confidence 356888777 5676766666553 236799999998876544322 367 888999862 21112468999
Q ss_pred EecccccC
Q 025144 146 TMGYGLRN 153 (257)
Q Consensus 146 ~~~~~l~~ 153 (257)
+.+.....
T Consensus 89 i~~ag~~~ 96 (236)
T 3e8x_A 89 VFAAGSGP 96 (236)
T ss_dssp EECCCCCT
T ss_pred EECCCCCC
Confidence 97766543
No 457
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=80.65 E-value=16 Score=30.78 Aligned_cols=97 Identities=15% Similarity=0.159 Sum_probs=54.6
Q ss_pred CeEEEecCCC-ChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhh-------hh-h--cc--CCCeeEEEccCCCCCC
Q 025144 71 DNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDL-------VS-K--AC--YKNIEWVEGDALDLPF 137 (257)
Q Consensus 71 ~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~-------~~-~--~~--~~~~~~~~~d~~~~~~ 137 (257)
.+|.-||+|. |......+.. .+.+|+++|.+++.++.+.+.... .+ . .. .....+ ..|...+
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~--~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~~-- 112 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFAR--VGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKEL-- 112 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHT--TTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGGGG--
T ss_pred CEEEEECcCHHHHHHHHHHHh--CCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHHHH--
Confidence 4799999886 4433322222 367999999999988877654321 00 0 00 011222 3343221
Q ss_pred CCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEE
Q 025144 138 SDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRIS 175 (257)
Q Consensus 138 ~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~ 175 (257)
...|+|+..-. ....-...+++++...++++..++
T Consensus 113 --~~aDlVIeaVp-e~~~~k~~v~~~l~~~~~~~~ii~ 147 (463)
T 1zcj_A 113 --STVDLVVEAVF-EDMNLKKKVFAELSALCKPGAFLC 147 (463)
T ss_dssp --TTCSEEEECCC-SCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred --CCCCEEEEcCC-CCHHHHHHHHHHHHhhCCCCeEEE
Confidence 34799886432 211113567788888888876654
No 458
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=80.31 E-value=15 Score=26.92 Aligned_cols=93 Identities=8% Similarity=0.048 Sum_probs=54.1
Q ss_pred eEEEecCCCChhHHHHHHHhC--CCceEEEEeCChh-HHHHHHhhhhhhhhccCCCeeEEEccCCCCC-C--CCCcccEE
Q 025144 72 NVLDVCCGSGDLSFLLSEQVG--SQGKVIGLDFSKN-QLSMASSRQDLVSKACYKNIEWVEGDALDLP-F--SDCFFDAI 145 (257)
Q Consensus 72 ~vLdiG~G~G~~~~~l~~~~~--~~~~v~~~D~s~~-~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-~--~~~~~D~v 145 (257)
+||=.| |+|.....+++.+- .+.+|++++.+++ .++..... . .++.++.+|+.+.. . .-...|+|
T Consensus 7 ~vlVtG-asg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~----~----~~~~~~~~D~~d~~~~~~~~~~~d~v 77 (221)
T 3r6d_A 7 YITILG-AAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIID----H----ERVTVIEGSFQNPGXLEQAVTNAEVV 77 (221)
T ss_dssp EEEEES-TTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHT----S----TTEEEEECCTTCHHHHHHHHTTCSEE
T ss_pred EEEEEe-CCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccC----C----CceEEEECCCCCHHHHHHHHcCCCEE
Confidence 477777 56666666655442 5779999998876 43322211 1 57899999998742 0 01357999
Q ss_pred EecccccCcccHHHHHHHHHhcccC--CCEEEEEe
Q 025144 146 TMGYGLRNVVDKRKALEESFRVLKP--GSRISVLD 178 (257)
Q Consensus 146 ~~~~~l~~~~~~~~~l~~~~~~Lk~--gG~l~~~~ 178 (257)
+.+.....+. .+.+.+.++. .|.++.+.
T Consensus 78 v~~ag~~n~~-----~~~~~~~~~~~~~~~iv~iS 107 (221)
T 3r6d_A 78 FVGAMESGSD-----MASIVKALSRXNIRRVIGVS 107 (221)
T ss_dssp EESCCCCHHH-----HHHHHHHHHHTTCCEEEEEE
T ss_pred EEcCCCCChh-----HHHHHHHHHhcCCCeEEEEe
Confidence 9876543332 3344444432 24665543
No 459
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=80.08 E-value=11 Score=29.05 Aligned_cols=87 Identities=20% Similarity=0.137 Sum_probs=48.2
Q ss_pred eEEEecCCC-ChhHHHHHHHhCCCc--eEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCC-cccEEEe
Q 025144 72 NVLDVCCGS-GDLSFLLSEQVGSQG--KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDC-FFDAITM 147 (257)
Q Consensus 72 ~vLdiG~G~-G~~~~~l~~~~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~D~v~~ 147 (257)
+|.=||+|. |......+.. .+. +|+++|.+++.++.+++. + -......|..+. -. ..|+|+.
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~--~g~~~~V~~~d~~~~~~~~~~~~----g-----~~~~~~~~~~~~---~~~~aDvVil 68 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRR--SGFKGKIYGYDINPESISKAVDL----G-----IIDEGTTSIAKV---EDFSPDFVML 68 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHH--TTCCSEEEEECSCHHHHHHHHHT----T-----SCSEEESCGGGG---GGTCCSEEEE
T ss_pred EEEEEecCHHHHHHHHHHHh--cCCCcEEEEEeCCHHHHHHHHHC----C-----CcccccCCHHHH---hcCCCCEEEE
Confidence 677888764 4333222223 234 899999998877765432 1 110112222221 12 5799987
Q ss_pred cccccCcccHHHHHHHHHhcccCCCEEE
Q 025144 148 GYGLRNVVDKRKALEESFRVLKPGSRIS 175 (257)
Q Consensus 148 ~~~l~~~~~~~~~l~~~~~~Lk~gG~l~ 175 (257)
.-... ....++..+...++++..++
T Consensus 69 avp~~---~~~~v~~~l~~~l~~~~iv~ 93 (281)
T 2g5c_A 69 SSPVR---TFREIAKKLSYILSEDATVT 93 (281)
T ss_dssp CSCHH---HHHHHHHHHHHHSCTTCEEE
T ss_pred cCCHH---HHHHHHHHHHhhCCCCcEEE
Confidence 54322 23456777777888877543
No 460
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=79.51 E-value=5.7 Score=31.43 Aligned_cols=97 Identities=16% Similarity=0.097 Sum_probs=51.5
Q ss_pred CCeEEEecCCC-Ch-hHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEe
Q 025144 70 GDNVLDVCCGS-GD-LSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 147 (257)
Q Consensus 70 ~~~vLdiG~G~-G~-~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 147 (257)
..+|.=+|+|. |. .+..++.. +...++..+|++++....+..... .. .+++.. ..|...+ ...|+|+.
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~-g~~~ev~L~Di~~~~~g~a~dl~~-~~---~~~i~~-t~d~~~l----~~aD~Vi~ 83 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAK-GIADRLVLLDLSEGTKGATMDLEI-FN---LPNVEI-SKDLSAS----AHSKVVIF 83 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECCC-----CHHHHHH-HT---CTTEEE-ESCGGGG----TTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhc-CCCCEEEEEcCCcchHHHHHHHhh-hc---CCCeEE-eCCHHHH----CCCCEEEE
Confidence 35899999985 43 44444444 333489999999863333333322 11 134544 2454332 34799997
Q ss_pred ccccc------------CcccHHHHHHHHHhcccCCCEEEEE
Q 025144 148 GYGLR------------NVVDKRKALEESFRVLKPGSRISVL 177 (257)
Q Consensus 148 ~~~l~------------~~~~~~~~l~~~~~~Lk~gG~l~~~ 177 (257)
..... ..+-...+++.+.+.. |++.+++.
T Consensus 84 aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~ 124 (303)
T 2i6t_A 84 TVNSLGSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVA 124 (303)
T ss_dssp CCCC----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEEC
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEc
Confidence 65332 1111345566666664 89987663
No 461
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=79.37 E-value=7 Score=30.05 Aligned_cols=105 Identities=12% Similarity=0.078 Sum_probs=60.2
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCceEEEEe-CChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-----C----
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLD-FSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----F---- 137 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D-~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~---- 137 (257)
.++++|=.|++. .+...+++.+ ..+.+|+.++ .+++..+...+.+...+ .++.++..|+.+.. +
T Consensus 26 ~~k~~lVTGas~-GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~v~~~~~~~~ 100 (267)
T 3u5t_A 26 TNKVAIVTGASR-GIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAG----GKALTAQADVSDPAAVRRLFATAE 100 (267)
T ss_dssp -CCEEEEESCSS-HHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTT----CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCC-HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC----CeEEEEEcCCCCHHHHHHHHHHHH
Confidence 356777777654 4444443332 1256888774 45555555554443332 57888999998742 0
Q ss_pred -CCCcccEEEecccccCcc--------c-----------HHHHHHHHHhcccCCCEEEEEe
Q 025144 138 -SDCFFDAITMGYGLRNVV--------D-----------KRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 138 -~~~~~D~v~~~~~l~~~~--------~-----------~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
..+..|+++.+....... + ...+++.+.+.++++|.++.+.
T Consensus 101 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 161 (267)
T 3u5t_A 101 EAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMS 161 (267)
T ss_dssp HHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 014689999776543221 1 1223556666777788877654
No 462
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=79.25 E-value=17 Score=28.36 Aligned_cols=97 Identities=8% Similarity=0.039 Sum_probs=50.4
Q ss_pred eEEEecCCC-ChhH-HHHHHHhCCCceEEEEeCChhHHHHHHhhhhh-hhhcc--CCCeeEEEccCCCCCCCCCcccEEE
Q 025144 72 NVLDVCCGS-GDLS-FLLSEQVGSQGKVIGLDFSKNQLSMASSRQDL-VSKAC--YKNIEWVEGDALDLPFSDCFFDAIT 146 (257)
Q Consensus 72 ~vLdiG~G~-G~~~-~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~-~~~~~--~~~~~~~~~d~~~~~~~~~~~D~v~ 146 (257)
+|.=||+|. |... ..|++ .+.+|+++|.+++.++..++.-.. ..... ..++... +..+..-.-..+|+|+
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~---~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~vi 79 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQ---GGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIF--SPEEIDHQNEQVDLII 79 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEE--CGGGCCTTSCCCSEEE
T ss_pred eEEEECcCHHHHHHHHHHHh---CCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceee--cchhhcccCCCCCEEE
Confidence 788898864 3332 33332 256999999998877766543100 00000 0001110 1111110012589998
Q ss_pred ecccccCcccHHHHHHHHHhcccCCCEEEE
Q 025144 147 MGYGLRNVVDKRKALEESFRVLKPGSRISV 176 (257)
Q Consensus 147 ~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~ 176 (257)
..-.-. .....++.+...++++..++.
T Consensus 80 ~~v~~~---~~~~v~~~l~~~l~~~~~iv~ 106 (316)
T 2ew2_A 80 ALTKAQ---QLDAMFKAIQPMITEKTYVLC 106 (316)
T ss_dssp ECSCHH---HHHHHHHHHGGGCCTTCEEEE
T ss_pred EEeccc---cHHHHHHHHHHhcCCCCEEEE
Confidence 754322 346677888888887766543
No 463
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=79.10 E-value=4.2 Score=33.01 Aligned_cols=67 Identities=13% Similarity=0.053 Sum_probs=44.4
Q ss_pred CCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-C--CCCcccEEE
Q 025144 70 GDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-F--SDCFFDAIT 146 (257)
Q Consensus 70 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-~--~~~~~D~v~ 146 (257)
..+||=+|| |..+..+++.+....+++..|.+.+.++.+++ ....+..|+.+.. + .-...|+|+
T Consensus 16 ~mkilvlGa--G~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~~-----------~~~~~~~d~~d~~~l~~~~~~~DvVi 82 (365)
T 3abi_A 16 HMKVLILGA--GNIGRAIAWDLKDEFDVYIGDVNNENLEKVKE-----------FATPLKVDASNFDKLVEVMKEFELVI 82 (365)
T ss_dssp CCEEEEECC--SHHHHHHHHHHTTTSEEEEEESCHHHHHHHTT-----------TSEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred ccEEEEECC--CHHHHHHHHHHhcCCCeEEEEcCHHHHHHHhc-----------cCCcEEEecCCHHHHHHHHhCCCEEE
Confidence 358999998 55666666665556799999999877766543 3455667776532 0 013579988
Q ss_pred ecc
Q 025144 147 MGY 149 (257)
Q Consensus 147 ~~~ 149 (257)
+..
T Consensus 83 ~~~ 85 (365)
T 3abi_A 83 GAL 85 (365)
T ss_dssp ECC
T ss_pred Eec
Confidence 643
No 464
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=78.68 E-value=12 Score=28.85 Aligned_cols=104 Identities=13% Similarity=0.107 Sum_probs=59.8
Q ss_pred CCeEEEecCCCChhHHHHHHHh-CCCceEEEEeCChhH-HHHHHhhhhhhhhccCCCeeEEEccCCCCC-----CC----
Q 025144 70 GDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQ-LSMASSRQDLVSKACYKNIEWVEGDALDLP-----FS---- 138 (257)
Q Consensus 70 ~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~-~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~---- 138 (257)
++++|=.|+ +|.+...+++.+ ..+.+|++++.++.. .+...+.+...+ .++.++..|+.+.. +.
T Consensus 29 ~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~ 103 (283)
T 1g0o_A 29 GKVALVTGA-GRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG----SDAACVKANVGVVEDIVRMFEEAVK 103 (283)
T ss_dssp TCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT----CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhC----CCeEEEEcCCCCHHHHHHHHHHHHH
Confidence 456666665 555665555543 236789999887643 333333332222 46888999987642 00
Q ss_pred -CCcccEEEecccccCcc--------c-----------HHHHHHHHHhcccCCCEEEEEe
Q 025144 139 -DCFFDAITMGYGLRNVV--------D-----------KRKALEESFRVLKPGSRISVLD 178 (257)
Q Consensus 139 -~~~~D~v~~~~~l~~~~--------~-----------~~~~l~~~~~~Lk~gG~l~~~~ 178 (257)
.+..|+++.+....... + ...+++.+.+.++.+|.++.+.
T Consensus 104 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 163 (283)
T 1g0o_A 104 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMG 163 (283)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEEC
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 14689999776543221 1 1223456666666778877654
No 465
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=78.57 E-value=23 Score=28.11 Aligned_cols=102 Identities=19% Similarity=0.117 Sum_probs=52.8
Q ss_pred CCeEEEecCCC-ChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEE-ccCCCCCCCCCcccEEEe
Q 025144 70 GDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVE-GDALDLPFSDCFFDAITM 147 (257)
Q Consensus 70 ~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~D~v~~ 147 (257)
..+|.=+|+|. |.....++.. ....++..+|++++.++.....+...........++.. .|...+ ...|+|+.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~-~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~~al----~~aD~Vi~ 78 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQ-KNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYDDL----AGADVVIV 78 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCGGGG----TTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCHHHh----CCCCEEEE
Confidence 34788999864 4433333333 12226999999988776543333221000001333333 444222 34799987
Q ss_pred cccccCcc------------------cHHHHHHHHHhcccCCCEEEEE
Q 025144 148 GYGLRNVV------------------DKRKALEESFRVLKPGSRISVL 177 (257)
Q Consensus 148 ~~~l~~~~------------------~~~~~l~~~~~~Lk~gG~l~~~ 177 (257)
......-+ -...+.+.+.+.. |++.+++.
T Consensus 79 a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~ 125 (322)
T 1t2d_A 79 TAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVV 125 (322)
T ss_dssp CCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEEC
T ss_pred eCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEe
Confidence 65222110 1344556666664 89988664
No 466
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=78.51 E-value=38 Score=30.57 Aligned_cols=45 Identities=20% Similarity=0.217 Sum_probs=33.5
Q ss_pred CCeEEEecCCCChhHHHHHHHh---CC-CceEEEEeCChhHHHHHHhhh
Q 025144 70 GDNVLDVCCGSGDLSFLLSEQV---GS-QGKVIGLDFSKNQLSMASSRQ 114 (257)
Q Consensus 70 ~~~vLdiG~G~G~~~~~l~~~~---~~-~~~v~~~D~s~~~~~~a~~~~ 114 (257)
..+|+|+=||.|.++.-+.+.. +. -.-+.++|.++.+++.-+.+.
T Consensus 212 ~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 212 TATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 3489999999999988776541 00 125789999999888777664
No 467
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=78.17 E-value=10 Score=29.07 Aligned_cols=78 Identities=14% Similarity=0.186 Sum_probs=53.2
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC----------C
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----------F 137 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~----------~ 137 (257)
+++.+|=-|++.| +...+++.+ ..+++|..+|.+++.++.+.+.++..+ .++..+..|+.+.. -
T Consensus 6 ~gKvalVTGas~G-IG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g----~~~~~~~~Dvt~~~~v~~~~~~~~~ 80 (254)
T 4fn4_A 6 KNKVVIVTGAGSG-IGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG----KEVLGVKADVSKKKDVEEFVRRTFE 80 (254)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT----CCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC----CcEEEEEccCCCHHHHHHHHHHHHH
Confidence 3556776676554 444443332 237899999999998888877776544 57889999998742 0
Q ss_pred CCCcccEEEecccc
Q 025144 138 SDCFFDAITMGYGL 151 (257)
Q Consensus 138 ~~~~~D~v~~~~~l 151 (257)
.-+..|+++.+...
T Consensus 81 ~~G~iDiLVNNAGi 94 (254)
T 4fn4_A 81 TYSRIDVLCNNAGI 94 (254)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCcc
Confidence 12679999987653
No 468
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=77.81 E-value=16 Score=28.81 Aligned_cols=94 Identities=14% Similarity=0.062 Sum_probs=53.2
Q ss_pred CCeEEEecCCC-Chh-HHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeE-----EEccCCCCCCCCCcc
Q 025144 70 GDNVLDVCCGS-GDL-SFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEW-----VEGDALDLPFSDCFF 142 (257)
Q Consensus 70 ~~~vLdiG~G~-G~~-~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~-----~~~d~~~~~~~~~~~ 142 (257)
..+|.=||+|. |.. +..|++ .+.+|+.+ .+++.++..++.-..... +...+ ...|... ...+
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~---~G~~V~l~-~~~~~~~~i~~~g~~~~~---~~~~~~~~~~~~~~~~~----~~~~ 87 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLAR---AGHEVILI-ARPQHVQAIEATGLRLET---QSFDEQVKVSASSDPSA----VQGA 87 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHH---TTCEEEEE-CCHHHHHHHHHHCEEEEC---SSCEEEECCEEESCGGG----GTTC
T ss_pred CCcEEEECcCHHHHHHHHHHHH---CCCeEEEE-EcHhHHHHHHhCCeEEEc---CCCcEEEeeeeeCCHHH----cCCC
Confidence 35899999884 433 333333 35689999 888777766543110000 11111 0112211 1468
Q ss_pred cEEEecccccCcccHHHHHHHHHhcccCCCEEEEE
Q 025144 143 DAITMGYGLRNVVDKRKALEESFRVLKPGSRISVL 177 (257)
Q Consensus 143 D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~ 177 (257)
|+|+..---. +....++.+...++++..++..
T Consensus 88 D~vilavk~~---~~~~~l~~l~~~l~~~~~iv~~ 119 (318)
T 3hwr_A 88 DLVLFCVKST---DTQSAALAMKPALAKSALVLSL 119 (318)
T ss_dssp SEEEECCCGG---GHHHHHHHHTTTSCTTCEEEEE
T ss_pred CEEEEEcccc---cHHHHHHHHHHhcCCCCEEEEe
Confidence 9998754333 4577888898899888766443
No 469
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=77.61 E-value=9 Score=30.85 Aligned_cols=97 Identities=9% Similarity=0.036 Sum_probs=56.3
Q ss_pred hCCCCC-CeEEEecC-C-CChhHHHHHHHhCCCceEEEEeCChhH----HHHHHhhhhhhhhccCCCeeEEEccC---CC
Q 025144 65 SGAKTG-DNVLDVCC-G-SGDLSFLLSEQVGSQGKVIGLDFSKNQ----LSMASSRQDLVSKACYKNIEWVEGDA---LD 134 (257)
Q Consensus 65 ~~~~~~-~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~~D~s~~~----~~~a~~~~~~~~~~~~~~~~~~~~d~---~~ 134 (257)
.++.++ .+||-.|+ | .|..+..+++.. +.+++++.-+++. .+.+++ .+ --.++..+- .+
T Consensus 162 ~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~--Ga~vi~~~~~~~~~~~~~~~~~~----lG-----a~~vi~~~~~~~~~ 230 (364)
T 1gu7_A 162 VKLTPGKDWFIQNGGTSAVGKYASQIGKLL--NFNSISVIRDRPNLDEVVASLKE----LG-----ATQVITEDQNNSRE 230 (364)
T ss_dssp SCCCTTTCEEEESCTTSHHHHHHHHHHHHH--TCEEEEEECCCTTHHHHHHHHHH----HT-----CSEEEEHHHHHCGG
T ss_pred hccCCCCcEEEECCCCcHHHHHHHHHHHHC--CCEEEEEecCccccHHHHHHHHh----cC-----CeEEEecCccchHH
Confidence 366788 99999986 3 578888888875 5677777655443 233322 12 112222110 11
Q ss_pred CC-----C---CCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEEEEee
Q 025144 135 LP-----F---SDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRISVLDF 179 (257)
Q Consensus 135 ~~-----~---~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 179 (257)
+. . ..+.+|+|+-.-. -.... ...+.|+++|.++....
T Consensus 231 ~~~~i~~~t~~~~~g~Dvvid~~G------~~~~~-~~~~~l~~~G~~v~~g~ 276 (364)
T 1gu7_A 231 FGPTIKEWIKQSGGEAKLALNCVG------GKSST-GIARKLNNNGLMLTYGG 276 (364)
T ss_dssp GHHHHHHHHHHHTCCEEEEEESSC------HHHHH-HHHHTSCTTCEEEECCC
T ss_pred HHHHHHHHhhccCCCceEEEECCC------chhHH-HHHHHhccCCEEEEecC
Confidence 10 0 1246999985332 12233 66789999999877543
No 470
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=77.35 E-value=5.3 Score=33.70 Aligned_cols=70 Identities=16% Similarity=0.036 Sum_probs=52.5
Q ss_pred CCCeEEEecCCCChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC----CCCCcccE
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----FSDCFFDA 144 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~D~ 144 (257)
+..+|+=+|+| ..+..+++.+....++..+|.+++-.+.+.+.+ ++..++++|..+.. ..-+..|+
T Consensus 234 ~~~~v~I~GgG--~ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~l--------~~~~Vi~GD~td~~~L~ee~i~~~D~ 303 (461)
T 4g65_A 234 PYRRIMIVGGG--NIGASLAKRLEQTYSVKLIERNLQRAEKLSEEL--------ENTIVFCGDAADQELLTEENIDQVDV 303 (461)
T ss_dssp CCCEEEEECCS--HHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHC--------TTSEEEESCTTCHHHHHHTTGGGCSE
T ss_pred cccEEEEEcch--HHHHHHHHHhhhcCceEEEecCHHHHHHHHHHC--------CCceEEeccccchhhHhhcCchhhcE
Confidence 45688888765 466666666666789999999998888877776 68899999999853 12256899
Q ss_pred EEec
Q 025144 145 ITMG 148 (257)
Q Consensus 145 v~~~ 148 (257)
+++.
T Consensus 304 ~ia~ 307 (461)
T 4g65_A 304 FIAL 307 (461)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 9873
No 471
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=77.10 E-value=13 Score=28.73 Aligned_cols=83 Identities=13% Similarity=0.125 Sum_probs=48.1
Q ss_pred CeEEEecC-CC-Chh-HHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEe
Q 025144 71 DNVLDVCC-GS-GDL-SFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 147 (257)
Q Consensus 71 ~~vLdiG~-G~-G~~-~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 147 (257)
.+|.=||+ |. |.. +..+.+ .+.+|+++|.+++.++.+.+. + +.. .+..+. -...|+|+.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~---~g~~V~~~~r~~~~~~~~~~~----g------~~~--~~~~~~---~~~aDvVi~ 73 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHD---SAHHLAAIEIAPEGRDRLQGM----G------IPL--TDGDGW---IDEADVVVL 73 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH---SSSEEEEECCSHHHHHHHHHT----T------CCC--CCSSGG---GGTCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHh---CCCEEEEEECCHHHHHHHHhc----C------CCc--CCHHHH---hcCCCEEEE
Confidence 37888988 64 433 233332 256899999998877665441 1 111 122111 135799987
Q ss_pred cccccCcccHHHHHHHHHhcccCCCEE
Q 025144 148 GYGLRNVVDKRKALEESFRVLKPGSRI 174 (257)
Q Consensus 148 ~~~l~~~~~~~~~l~~~~~~Lk~gG~l 174 (257)
.-.-. ....+++.+...++++..+
T Consensus 74 av~~~---~~~~v~~~l~~~l~~~~iv 97 (286)
T 3c24_A 74 ALPDN---IIEKVAEDIVPRVRPGTIV 97 (286)
T ss_dssp CSCHH---HHHHHHHHHGGGSCTTCEE
T ss_pred cCCch---HHHHHHHHHHHhCCCCCEE
Confidence 54322 2456677777777777644
No 472
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=76.87 E-value=16 Score=31.03 Aligned_cols=96 Identities=16% Similarity=0.127 Sum_probs=55.1
Q ss_pred CeEEEecCCC-Ch-hHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhh----c----------cCCCeeEEEccCCC
Q 025144 71 DNVLDVCCGS-GD-LSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSK----A----------CYKNIEWVEGDALD 134 (257)
Q Consensus 71 ~~vLdiG~G~-G~-~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~----~----------~~~~~~~~~~d~~~ 134 (257)
.+|.=||+|. |. ++..+++. +.+|++.|.+++.++.+.+.+...-. . ...++.. ..|...
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~a---G~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~-~~~~~~ 81 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASH---GHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIP-VTDIHA 81 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT---TCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEE-ECCGGG
T ss_pred CEEEEECcCHHHHHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeE-eCCHHH
Confidence 4688888875 43 33444433 67999999999999887764321100 0 0012332 233322
Q ss_pred CCCCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEE
Q 025144 135 LPFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRIS 175 (257)
Q Consensus 135 ~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~ 175 (257)
+ ...|+|+..- .....-...+++++...++++..++
T Consensus 82 ~----~~aDlVIeAV-pe~~~vk~~v~~~l~~~~~~~~Ila 117 (483)
T 3mog_A 82 L----AAADLVIEAA-SERLEVKKALFAQLAEVCPPQTLLT 117 (483)
T ss_dssp G----GGCSEEEECC-CCCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred h----cCCCEEEEcC-CCcHHHHHHHHHHHHHhhccCcEEE
Confidence 1 3479988632 2222123567888888888887653
No 473
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=76.81 E-value=14 Score=28.22 Aligned_cols=78 Identities=13% Similarity=0.009 Sum_probs=51.8
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-----C-----
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----F----- 137 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~----- 137 (257)
.++++|=.|++.| +...+++.+ ..+.+|+.+|.+++.++...+.+...+ .++.++..|+.+.. +
T Consensus 10 ~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (264)
T 3ucx_A 10 TDKVVVISGVGPA-LGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG----RRALSVGTDITDDAQVAHLVDETMK 84 (264)
T ss_dssp TTCEEEEESCCTT-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT----CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCcH-HHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcC----CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4567887776554 444443332 236799999999888877766664433 57899999998742 0
Q ss_pred CCCcccEEEecccc
Q 025144 138 SDCFFDAITMGYGL 151 (257)
Q Consensus 138 ~~~~~D~v~~~~~l 151 (257)
..+..|+++.+...
T Consensus 85 ~~g~id~lv~nAg~ 98 (264)
T 3ucx_A 85 AYGRVDVVINNAFR 98 (264)
T ss_dssp HTSCCSEEEECCCS
T ss_pred HcCCCcEEEECCCC
Confidence 12468999976643
No 474
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=76.62 E-value=8 Score=29.35 Aligned_cols=79 Identities=10% Similarity=0.051 Sum_probs=52.5
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-----CC----
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----FS---- 138 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~---- 138 (257)
.++++|=.|++. .+...+++.+ ..+.+|+++|.+++.++.+.+.+...+ .++.++.+|+.+.. +.
T Consensus 6 ~~k~vlVTGas~-GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (252)
T 3h7a_A 6 RNATVAVIGAGD-YIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG----GRIVARSLDARNEDEVTAFLNAADA 80 (252)
T ss_dssp CSCEEEEECCSS-HHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT----CEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCc-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC----CeEEEEECcCCCHHHHHHHHHHHHh
Confidence 355777777654 4554444433 236799999999888877776665433 57899999998742 00
Q ss_pred CCcccEEEeccccc
Q 025144 139 DCFFDAITMGYGLR 152 (257)
Q Consensus 139 ~~~~D~v~~~~~l~ 152 (257)
.+..|+++.+....
T Consensus 81 ~g~id~lv~nAg~~ 94 (252)
T 3h7a_A 81 HAPLEVTIFNVGAN 94 (252)
T ss_dssp HSCEEEEEECCCCC
T ss_pred hCCceEEEECCCcC
Confidence 14689999776643
No 475
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=76.59 E-value=21 Score=27.49 Aligned_cols=79 Identities=8% Similarity=-0.103 Sum_probs=46.3
Q ss_pred CCCeEEEecCCC-ChhHHHHHHHh-CCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-----C----
Q 025144 69 TGDNVLDVCCGS-GDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----F---- 137 (257)
Q Consensus 69 ~~~~vLdiG~G~-G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~---- 137 (257)
.++++|=.|++. |.+...+++.+ ..+.+|++++.+++..+.++ .+.... +++.++.+|+.+.. +
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~l~~~~----~~~~~~~~Dl~~~~~v~~~~~~~~ 94 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVR-EIAKGF----GSDLVVKCDVSLDEDIKNLKKFLE 94 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHHHHT----TCCCEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HHHHhc----CCeEEEEcCCCCHHHHHHHHHHHH
Confidence 356788888652 55555555443 23678999998875222222 221111 34678889988742 0
Q ss_pred -CCCcccEEEeccccc
Q 025144 138 -SDCFFDAITMGYGLR 152 (257)
Q Consensus 138 -~~~~~D~v~~~~~l~ 152 (257)
..+..|+++.+....
T Consensus 95 ~~~g~iD~lv~~Ag~~ 110 (285)
T 2p91_A 95 ENWGSLDIIVHSIAYA 110 (285)
T ss_dssp HHTSCCCEEEECCCCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 014689999876543
No 476
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=76.43 E-value=3.9 Score=32.62 Aligned_cols=99 Identities=17% Similarity=0.008 Sum_probs=55.3
Q ss_pred CCeEEEecCCC-ChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhh----hcc-----------CCCeeEEEccCC
Q 025144 70 GDNVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVS----KAC-----------YKNIEWVEGDAL 133 (257)
Q Consensus 70 ~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~----~~~-----------~~~~~~~~~d~~ 133 (257)
..+|.-||+|+ |.-....... .+.+|+.+|++++.++.+.+++...- ... ..++.. ..|+.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~--~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~-~~~l~ 82 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFAS--GGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTNLA 82 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH--TTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECCHH
T ss_pred CCeEEEECCcHHHHHHHHHHHh--CCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhccc-ccchH
Confidence 45899999985 5433333333 37899999999999888776553211 000 001221 12221
Q ss_pred CCCCCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEE
Q 025144 134 DLPFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRIS 175 (257)
Q Consensus 134 ~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~ 175 (257)
+. -...|+|+ -.+...++-...+++++-++++|+..|.
T Consensus 83 ~a---~~~ad~Vi-Eav~E~l~iK~~lf~~l~~~~~~~aIla 120 (319)
T 3ado_A 83 EA---VEGVVHIQ-ECVPENLDLKRKIFAQLDSIVDDRVVLS 120 (319)
T ss_dssp HH---TTTEEEEE-ECCCSCHHHHHHHHHHHHTTCCSSSEEE
T ss_pred hH---hccCcEEe-eccccHHHHHHHHHHHHHHHhhhcceee
Confidence 10 12356654 2334444445677888888888776664
No 477
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=76.42 E-value=11 Score=28.39 Aligned_cols=77 Identities=14% Similarity=0.089 Sum_probs=49.6
Q ss_pred CCCCeEEEecCCCChhHHHHHHHh-CCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC------CCCC
Q 025144 68 KTGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP------FSDC 140 (257)
Q Consensus 68 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~------~~~~ 140 (257)
.++++||=.|+ +|.+...+++.+ ..+.+|+.++.+++.++...+.+. .++.+...|+.+.. -..+
T Consensus 12 ~~~k~vlVTGa-s~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~~~ 83 (249)
T 3f9i_A 12 LTGKTSLITGA-SSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK-------DNYTIEVCNLANKEECSNLISKTS 83 (249)
T ss_dssp CTTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-------SSEEEEECCTTSHHHHHHHHHTCS
T ss_pred CCCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc-------cCccEEEcCCCCHHHHHHHHHhcC
Confidence 45667887775 455555554443 236799999999887776655442 47888889987642 1124
Q ss_pred cccEEEeccccc
Q 025144 141 FFDAITMGYGLR 152 (257)
Q Consensus 141 ~~D~v~~~~~l~ 152 (257)
..|+++.+....
T Consensus 84 ~id~li~~Ag~~ 95 (249)
T 3f9i_A 84 NLDILVCNAGIT 95 (249)
T ss_dssp CCSEEEECCC--
T ss_pred CCCEEEECCCCC
Confidence 689999766543
No 478
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=76.22 E-value=10 Score=28.57 Aligned_cols=78 Identities=12% Similarity=0.008 Sum_probs=52.0
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-----C-----
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----F----- 137 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~----- 137 (257)
.++++|=.|++ |.+...+++.+ ..+.+|+.+|.+++.++...+.+...+ .++.++..|+.+.. +
T Consensus 8 ~~k~vlITGas-~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (253)
T 3qiv_A 8 ENKVGIVTGSG-GGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG----GTAISVAVDVSDPESAKAMADRTLA 82 (253)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT----CEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC----CcEEEEEccCCCHHHHHHHHHHHHH
Confidence 35577777754 45555554443 236799999999988877766664432 57888999998742 0
Q ss_pred CCCcccEEEecccc
Q 025144 138 SDCFFDAITMGYGL 151 (257)
Q Consensus 138 ~~~~~D~v~~~~~l 151 (257)
..+..|+++.+...
T Consensus 83 ~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 83 EFGGIDYLVNNAAI 96 (253)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCc
Confidence 01368999987654
No 479
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=76.14 E-value=10 Score=30.18 Aligned_cols=97 Identities=18% Similarity=0.050 Sum_probs=54.4
Q ss_pred CeEEEecCCC-Ch-hHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhh----hcc-----------CCCeeEEEccCC
Q 025144 71 DNVLDVCCGS-GD-LSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVS----KAC-----------YKNIEWVEGDAL 133 (257)
Q Consensus 71 ~~vLdiG~G~-G~-~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~----~~~-----------~~~~~~~~~d~~ 133 (257)
.+|.-||+|. |. ++..+++ .+.+|++.|.+++.++.+.+++...- ..+ ..++.+ ..|..
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~---~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~-~~~~~ 82 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFAS---GGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTNLA 82 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---TTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECCHH
T ss_pred ceEEEEeeCHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEE-eCCHH
Confidence 4788898875 43 3344443 36799999999999888866432110 000 012332 22322
Q ss_pred CCCCCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEE
Q 025144 134 DLPFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRIS 175 (257)
Q Consensus 134 ~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~ 175 (257)
+. -...|+|+..-. ....-...++.++...++|+..++
T Consensus 83 ea---v~~aDlVieavp-e~~~~k~~v~~~l~~~~~~~~Ii~ 120 (319)
T 2dpo_A 83 EA---VEGVVHIQECVP-ENLDLKRKIFAQLDSIVDDRVVLS 120 (319)
T ss_dssp HH---TTTEEEEEECCC-SCHHHHHHHHHHHHTTCCSSSEEE
T ss_pred HH---HhcCCEEEEecc-CCHHHHHHHHHHHHhhCCCCeEEE
Confidence 21 134788886431 111123567888888888877553
No 480
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=76.09 E-value=26 Score=27.53 Aligned_cols=101 Identities=12% Similarity=0.072 Sum_probs=49.2
Q ss_pred eEEEecCCC-ChhHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEE-ccCCCCCCCCCcccEEEecc
Q 025144 72 NVLDVCCGS-GDLSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVE-GDALDLPFSDCFFDAITMGY 149 (257)
Q Consensus 72 ~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~D~v~~~~ 149 (257)
+|.=+|+|. |......+..-+.+.+|+++|.+++.++.....+............+.. .|...+ ...|+|+..-
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~l----~~aDvViiav 77 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYADT----ANSDIVIITA 77 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGGG----TTCSEEEECC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHHH----CCCCEEEEeC
Confidence 577788764 3322222222112579999999987666432211110000001223322 344332 3479999765
Q ss_pred cccCcc-----cH--------HHHHHHHHhcccCCCEEEEE
Q 025144 150 GLRNVV-----DK--------RKALEESFRVLKPGSRISVL 177 (257)
Q Consensus 150 ~l~~~~-----~~--------~~~l~~~~~~Lk~gG~l~~~ 177 (257)
.....+ |. ....+.+.+. .|++.+++.
T Consensus 78 ~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~~~~~viv~ 117 (310)
T 1guz_A 78 GLPRKPGMTREDLLMKNAGIVKEVTDNIMKH-SKNPIIIVV 117 (310)
T ss_dssp SCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CSSCEEEEC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEE
Confidence 433222 11 3344455545 588887664
No 481
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=75.94 E-value=21 Score=27.34 Aligned_cols=78 Identities=10% Similarity=0.017 Sum_probs=46.9
Q ss_pred CCeEEEecCC-CChhHHHHHHHh-CCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-----C-----
Q 025144 70 GDNVLDVCCG-SGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----F----- 137 (257)
Q Consensus 70 ~~~vLdiG~G-~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~----- 137 (257)
++++|=.|++ +|.+...+++.+ ..+.+|+.++.+++ .+...+.+.... .++.++..|+.+.. +
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~ 80 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQEL----NSPYVYELDVSKEEHFKSLYNSVKK 80 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHT----TCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhc----CCcEEEEcCCCCHHHHHHHHHHHHH
Confidence 5678888875 255666665544 34679999998875 222222221111 34788899988742 0
Q ss_pred CCCcccEEEeccccc
Q 025144 138 SDCFFDAITMGYGLR 152 (257)
Q Consensus 138 ~~~~~D~v~~~~~l~ 152 (257)
..+..|+++.+....
T Consensus 81 ~~g~id~lv~nAg~~ 95 (275)
T 2pd4_A 81 DLGSLDFIVHSVAFA 95 (275)
T ss_dssp HTSCEEEEEECCCCC
T ss_pred HcCCCCEEEECCccC
Confidence 124689999876543
No 482
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=75.73 E-value=32 Score=28.23 Aligned_cols=82 Identities=17% Similarity=0.043 Sum_probs=48.8
Q ss_pred CCCeEEEecCCCChhHHHHHHHhC-CCceEEEEeCChh---HHHHHHhhhhhh-----hhccCCCeeEEEccCCCCC-C-
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQVG-SQGKVIGLDFSKN---QLSMASSRQDLV-----SKACYKNIEWVEGDALDLP-F- 137 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~~-~~~~v~~~D~s~~---~~~~a~~~~~~~-----~~~~~~~~~~~~~d~~~~~-~- 137 (257)
+..+||=.| |+|.++..+++.+. .+.+|++++.++. ..+...+.+... ......++.++.+|+.+.. +
T Consensus 68 ~~~~vlVTG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~ 146 (427)
T 4f6c_A 68 PLGNTLLTG-ATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV 146 (427)
T ss_dssp CCEEEEEEC-TTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC
T ss_pred CCCEEEEec-CCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC
Confidence 344677766 67888888887762 3568999988776 333333322211 0000158999999998732 1
Q ss_pred CCCcccEEEecccc
Q 025144 138 SDCFFDAITMGYGL 151 (257)
Q Consensus 138 ~~~~~D~v~~~~~l 151 (257)
....+|+|+.+...
T Consensus 147 ~~~~~d~Vih~A~~ 160 (427)
T 4f6c_A 147 LPENMDTIIHAGAR 160 (427)
T ss_dssp CSSCCSEEEECCCC
T ss_pred CcCCCCEEEECCcc
Confidence 23578999976554
No 483
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=75.51 E-value=21 Score=25.94 Aligned_cols=94 Identities=16% Similarity=0.235 Sum_probs=56.0
Q ss_pred eEEEecCCCChhHHHHHHHh-CCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCC-CCCcccEEEecc
Q 025144 72 NVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPF-SDCFFDAITMGY 149 (257)
Q Consensus 72 ~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~D~v~~~~ 149 (257)
+||=.| |+|.....+++.+ ..+.+|++++-+++.++... .++.++.+|+.+... .-..+|+|+...
T Consensus 2 kvlVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-----------~~~~~~~~D~~d~~~~~~~~~d~vi~~a 69 (221)
T 3ew7_A 2 KIGIIG-ATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-----------KDINILQKDIFDLTLSDLSDQNVVVDAY 69 (221)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-----------SSSEEEECCGGGCCHHHHTTCSEEEECC
T ss_pred eEEEEc-CCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-----------CCCeEEeccccChhhhhhcCCCEEEECC
Confidence 466666 5677766666554 23579999998876543321 378899999987531 013589999766
Q ss_pred cccCc--ccHHHHHHHHHhcccC--CCEEEEE
Q 025144 150 GLRNV--VDKRKALEESFRVLKP--GSRISVL 177 (257)
Q Consensus 150 ~l~~~--~~~~~~l~~~~~~Lk~--gG~l~~~ 177 (257)
..... ........++.+.++. .+.+++.
T Consensus 70 g~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~ 101 (221)
T 3ew7_A 70 GISPDEAEKHVTSLDHLISVLNGTVSPRLLVV 101 (221)
T ss_dssp CSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEE
T ss_pred cCCccccchHHHHHHHHHHHHHhcCCceEEEE
Confidence 54321 1233444555555544 3556554
No 484
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=75.39 E-value=15 Score=28.72 Aligned_cols=87 Identities=18% Similarity=0.100 Sum_probs=47.9
Q ss_pred CeEEEecCCC-Chh-HHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEec
Q 025144 71 DNVLDVCCGS-GDL-SFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITMG 148 (257)
Q Consensus 71 ~~vLdiG~G~-G~~-~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 148 (257)
.+|.=||+|. |.. +..|++ .+.+|++.|.+++.++.+.+. .......+..+. -...|+|+..
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~---~G~~V~~~dr~~~~~~~~~~~----------g~~~~~~~~~e~---~~~aDvvi~~ 71 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLR---AGLSTWGADLNPQACANLLAE----------GACGAAASAREF---AGVVDALVIL 71 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHHT----------TCSEEESSSTTT---TTTCSEEEEC
T ss_pred CeEEEECCCHHHHHHHHHHHH---CCCeEEEEECCHHHHHHHHHc----------CCccccCCHHHH---HhcCCEEEEE
Confidence 4788898764 332 233333 357999999999877766543 112223344332 1347998864
Q ss_pred ccccCcccHHHHH---HHHHhcccCCCEEE
Q 025144 149 YGLRNVVDKRKAL---EESFRVLKPGSRIS 175 (257)
Q Consensus 149 ~~l~~~~~~~~~l---~~~~~~Lk~gG~l~ 175 (257)
-.-. ......+ +.+...+++|..++
T Consensus 72 vp~~--~~~~~v~~~~~~l~~~l~~g~ivv 99 (303)
T 3g0o_A 72 VVNA--AQVRQVLFGEDGVAHLMKPGSAVM 99 (303)
T ss_dssp CSSH--HHHHHHHC--CCCGGGSCTTCEEE
T ss_pred CCCH--HHHHHHHhChhhHHhhCCCCCEEE
Confidence 3210 1123333 45556677776553
No 485
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=75.28 E-value=13 Score=29.15 Aligned_cols=79 Identities=11% Similarity=0.032 Sum_probs=53.1
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-----CC----
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----FS---- 138 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~---- 138 (257)
.+++||=.|++ |.+...+++.+ ..+.+|++++.+++.++.+.+.+...+ .++.++..|+.+.. +.
T Consensus 30 ~gk~vlVTGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~ 104 (301)
T 3tjr_A 30 DGRAAVVTGGA-SGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG----FDAHGVVCDVRHLDEMVRLADEAFR 104 (301)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT----CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC----CceEEEEccCCCHHHHHHHHHHHHH
Confidence 45678877765 44554444433 236799999999988877766664432 57899999998742 00
Q ss_pred -CCcccEEEeccccc
Q 025144 139 -DCFFDAITMGYGLR 152 (257)
Q Consensus 139 -~~~~D~v~~~~~l~ 152 (257)
.+..|+++.+....
T Consensus 105 ~~g~id~lvnnAg~~ 119 (301)
T 3tjr_A 105 LLGGVDVVFSNAGIV 119 (301)
T ss_dssp HHSSCSEEEECCCCC
T ss_pred hCCCCCEEEECCCcC
Confidence 14689999876643
No 486
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=74.61 E-value=24 Score=26.23 Aligned_cols=91 Identities=9% Similarity=0.013 Sum_probs=56.7
Q ss_pred CCeEEEecCCCChhHHHHHHHhCC-CceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC----CCCCcccE
Q 025144 70 GDNVLDVCCGSGDLSFLLSEQVGS-QGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP----FSDCFFDA 144 (257)
Q Consensus 70 ~~~vLdiG~G~G~~~~~l~~~~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~D~ 144 (257)
..+|+=+|+ |..+..+++.+.. +. |+++|.+++.++.+. .++.++.+|..+.. ..-...|+
T Consensus 9 ~~~viI~G~--G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----------~~~~~i~gd~~~~~~l~~a~i~~ad~ 74 (234)
T 2aef_A 9 SRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKKVLR-----------SGANFVHGDPTRVSDLEKANVRGARA 74 (234)
T ss_dssp -CEEEEESC--CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----------TTCEEEESCTTCHHHHHHTTCTTCSE
T ss_pred CCEEEEECC--ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----------cCCeEEEcCCCCHHHHHhcCcchhcE
Confidence 457888887 6777777777532 45 999999988766554 14778899987632 12346898
Q ss_pred EEecccccCcccHHHHHHHHHhcccCCCEEEEE
Q 025144 145 ITMGYGLRNVVDKRKALEESFRVLKPGSRISVL 177 (257)
Q Consensus 145 v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~ 177 (257)
|++...- +.....+....+.+.|+..++..
T Consensus 75 vi~~~~~---d~~n~~~~~~a~~~~~~~~iia~ 104 (234)
T 2aef_A 75 VIVDLES---DSETIHCILGIRKIDESVRIIAE 104 (234)
T ss_dssp EEECCSC---HHHHHHHHHHHHHHCSSSEEEEE
T ss_pred EEEcCCC---cHHHHHHHHHHHHHCCCCeEEEE
Confidence 8874321 11223344455556777666554
No 487
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=74.25 E-value=38 Score=28.47 Aligned_cols=97 Identities=10% Similarity=0.030 Sum_probs=51.9
Q ss_pred CCeEEEecCCC-Ch-hHHHHHHHhCCCceEEEEeCChhHH-HHHHhhhhhh---hh-------ccCCCeeEEEccCCCCC
Q 025144 70 GDNVLDVCCGS-GD-LSFLLSEQVGSQGKVIGLDFSKNQL-SMASSRQDLV---SK-------ACYKNIEWVEGDALDLP 136 (257)
Q Consensus 70 ~~~vLdiG~G~-G~-~~~~l~~~~~~~~~v~~~D~s~~~~-~~a~~~~~~~---~~-------~~~~~~~~~~~d~~~~~ 136 (257)
-.+|.-||+|+ |. ++..+++ .+.+|++.|.+++.. ...++.+... +. ....++.+ ..|...+
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~---aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~-t~dl~al- 128 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGL---AGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKI-TSDFHKL- 128 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEE-ESCGGGC-
T ss_pred CCEEEEECCCHHHHHHHHHHHH---CCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEE-eCCHHHH-
Confidence 35799999985 44 3444443 368999999999721 1111111110 00 00123333 3343322
Q ss_pred CCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEEE
Q 025144 137 FSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRIS 175 (257)
Q Consensus 137 ~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~ 175 (257)
...|+|+..-. ....-...+++++...++|+.++.
T Consensus 129 ---~~aDlVIeAVp-e~~~vk~~v~~~l~~~~~~~aIla 163 (460)
T 3k6j_A 129 ---SNCDLIVESVI-EDMKLKKELFANLENICKSTCIFG 163 (460)
T ss_dssp ---TTCSEEEECCC-SCHHHHHHHHHHHHTTSCTTCEEE
T ss_pred ---ccCCEEEEcCC-CCHHHHHHHHHHHHhhCCCCCEEE
Confidence 34799986332 222223567888888998887664
No 488
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=73.93 E-value=11 Score=28.69 Aligned_cols=78 Identities=10% Similarity=0.043 Sum_probs=52.6
Q ss_pred CCCeEEEecCCCChhHHHHHHHh-CCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-----C-----
Q 025144 69 TGDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----F----- 137 (257)
Q Consensus 69 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~----- 137 (257)
.+++||=.|+ +|.++..+++.+ ..+.+|++++.+++.++...+.+...+ .++.++..|+.+.. +
T Consensus 28 ~~k~vlITGa-s~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~ 102 (262)
T 3rkr_A 28 SGQVAVVTGA-SRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG----GEAESHACDLSHSDAIAAFATGVLA 102 (262)
T ss_dssp TTCEEEESST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT----CEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC----CceeEEEecCCCHHHHHHHHHHHHH
Confidence 4567777775 455655555543 236799999999988777766654433 57889999998742 0
Q ss_pred CCCcccEEEecccc
Q 025144 138 SDCFFDAITMGYGL 151 (257)
Q Consensus 138 ~~~~~D~v~~~~~l 151 (257)
..+..|+++.+...
T Consensus 103 ~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 103 AHGRCDVLVNNAGV 116 (262)
T ss_dssp HHSCCSEEEECCCC
T ss_pred hcCCCCEEEECCCc
Confidence 01468999977665
No 489
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=73.86 E-value=32 Score=27.37 Aligned_cols=100 Identities=12% Similarity=0.007 Sum_probs=51.9
Q ss_pred CeEEEecCCC-ChhHHHHHHHhCCCc-eEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEE-ccCCCCCCCCCcccEEEe
Q 025144 71 DNVLDVCCGS-GDLSFLLSEQVGSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVE-GDALDLPFSDCFFDAITM 147 (257)
Q Consensus 71 ~~vLdiG~G~-G~~~~~l~~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~D~v~~ 147 (257)
.+|.=+|+|. |.....++.. .+. ++..+|.+++.++.....+...........++.. .|...+ ...|+|+.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~--~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~~al----~~aD~VI~ 88 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQ--KDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNYEYL----QNSDVVII 88 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCGGGG----TTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCHHHH----CCCCEEEE
Confidence 5899999875 4333333333 234 7999999998777533222211100001222222 444222 34799987
Q ss_pred cccccCc-------------ccHHHHHHHHHhcccCCCEEEEE
Q 025144 148 GYGLRNV-------------VDKRKALEESFRVLKPGSRISVL 177 (257)
Q Consensus 148 ~~~l~~~-------------~~~~~~l~~~~~~Lk~gG~l~~~ 177 (257)
......- +-...+.+.+.+.. |++.+++.
T Consensus 89 avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~ 130 (328)
T 2hjr_A 89 TAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYC-PNAFVICI 130 (328)
T ss_dssp CCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHC-TTCEEEEC
T ss_pred cCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHC-CCeEEEEe
Confidence 6422111 11344566666654 88887653
No 490
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=73.83 E-value=3.5 Score=31.32 Aligned_cols=85 Identities=15% Similarity=0.140 Sum_probs=43.9
Q ss_pred CeEEEecCCC-Ch-hHHHHHHHhCCCc----eEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccE
Q 025144 71 DNVLDVCCGS-GD-LSFLLSEQVGSQG----KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDA 144 (257)
Q Consensus 71 ~~vLdiG~G~-G~-~~~~l~~~~~~~~----~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 144 (257)
.+|.-||+|. |. ++..+.+. +. +|++.|.+++.++...+.. .+.. ..|..+. -...|+
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~---g~~~~~~V~~~~r~~~~~~~~~~~~---------g~~~-~~~~~e~---~~~aDv 66 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK---NIVSSNQIICSDLNTANLKNASEKY---------GLTT-TTDNNEV---AKNADI 66 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT---TSSCGGGEEEECSCHHHHHHHHHHH---------CCEE-CSCHHHH---HHHCSE
T ss_pred CeEEEECccHHHHHHHHHHHhC---CCCCCCeEEEEeCCHHHHHHHHHHh---------CCEE-eCChHHH---HHhCCE
Confidence 3688888774 33 33334333 33 8999999998777665432 1221 1111110 123677
Q ss_pred EEecccccCcccHHHHHHHHHhcccCCCEE
Q 025144 145 ITMGYGLRNVVDKRKALEESFRVLKPGSRI 174 (257)
Q Consensus 145 v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l 174 (257)
|+..-. ......+++.+...++++..+
T Consensus 67 Vilav~---~~~~~~v~~~l~~~l~~~~~v 93 (247)
T 3gt0_A 67 LILSIK---PDLYASIINEIKEIIKNDAII 93 (247)
T ss_dssp EEECSC---TTTHHHHC---CCSSCTTCEE
T ss_pred EEEEeC---HHHHHHHHHHHHhhcCCCCEE
Confidence 776442 223455666666666666544
No 491
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=73.43 E-value=12 Score=29.07 Aligned_cols=87 Identities=11% Similarity=0.077 Sum_probs=50.0
Q ss_pred CeEEEecCCC-Ch-hHHHHHHHhC-CCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEe
Q 025144 71 DNVLDVCCGS-GD-LSFLLSEQVG-SQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 147 (257)
Q Consensus 71 ~~vLdiG~G~-G~-~~~~l~~~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 147 (257)
.+|.=||||. |. ++..+.+. + +..+|++.|.+++.++.+.+.+ ++... .|..+. -...|+|+.
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~-g~~~~~V~v~dr~~~~~~~l~~~~---------gi~~~-~~~~~~---~~~aDvVil 69 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIAN-GYDPNRICVTNRSLDKLDFFKEKC---------GVHTT-QDNRQG---ALNADVVVL 69 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHT-TCCGGGEEEECSSSHHHHHHHHTT---------CCEEE-SCHHHH---HSSCSEEEE
T ss_pred CEEEEEcccHHHHHHHHHHHHC-CCCCCeEEEEeCCHHHHHHHHHHc---------CCEEe-CChHHH---HhcCCeEEE
Confidence 4788898874 33 33334433 1 1228999999998877766542 23322 121111 134699887
Q ss_pred cccccCcccHHHHHHHHHhc-ccCCCEE
Q 025144 148 GYGLRNVVDKRKALEESFRV-LKPGSRI 174 (257)
Q Consensus 148 ~~~l~~~~~~~~~l~~~~~~-Lk~gG~l 174 (257)
.-.- .....+++++... ++++-.+
T Consensus 70 av~p---~~~~~vl~~l~~~~l~~~~ii 94 (280)
T 3tri_A 70 AVKP---HQIKMVCEELKDILSETKILV 94 (280)
T ss_dssp CSCG---GGHHHHHHHHHHHHHTTTCEE
T ss_pred EeCH---HHHHHHHHHHHhhccCCCeEE
Confidence 5432 3456778888877 7665444
No 492
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=73.33 E-value=29 Score=29.36 Aligned_cols=80 Identities=18% Similarity=0.061 Sum_probs=49.5
Q ss_pred CeEEEecCCCChhHHHHHHHhC-CCceEEEEeCChh---HHHHHHhhhhhh-----hhccCCCeeEEEccCCCCC-C-CC
Q 025144 71 DNVLDVCCGSGDLSFLLSEQVG-SQGKVIGLDFSKN---QLSMASSRQDLV-----SKACYKNIEWVEGDALDLP-F-SD 139 (257)
Q Consensus 71 ~~vLdiG~G~G~~~~~l~~~~~-~~~~v~~~D~s~~---~~~~a~~~~~~~-----~~~~~~~~~~~~~d~~~~~-~-~~ 139 (257)
.+||=.| |+|.++..+++.+. .+.+|++++-++. ..+...+.++.. ......++.++.+|+.+.+ + ..
T Consensus 151 ~~VLVTG-atG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~ 229 (508)
T 4f6l_B 151 GNTLLTG-ATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVVLP 229 (508)
T ss_dssp EEEEESC-TTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCCCS
T ss_pred CeEEEEC-CccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCCCc
Confidence 4666555 78999999988863 2458999987665 222222222111 0001258999999998733 2 23
Q ss_pred CcccEEEecccc
Q 025144 140 CFFDAITMGYGL 151 (257)
Q Consensus 140 ~~~D~v~~~~~l 151 (257)
..+|+|+.....
T Consensus 230 ~~~D~Vih~Aa~ 241 (508)
T 4f6l_B 230 ENMDTIIHAGAR 241 (508)
T ss_dssp SCCSEEEECCCC
T ss_pred cCCCEEEECCce
Confidence 579999965543
No 493
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=73.31 E-value=15 Score=28.17 Aligned_cols=96 Identities=9% Similarity=-0.022 Sum_probs=54.4
Q ss_pred eEEEecCCCChhHHHHHHHhC--CCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC---CCCCcccEEE
Q 025144 72 NVLDVCCGSGDLSFLLSEQVG--SQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP---FSDCFFDAIT 146 (257)
Q Consensus 72 ~vLdiG~G~G~~~~~l~~~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~D~v~ 146 (257)
+||=.| |+|..+..+++.+. ++.+|.+++-++..... +. ..++.++.+|+.+.. -.-..+|+|+
T Consensus 2 ~ilVtG-atG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~----~~------~~~v~~~~~D~~d~~~l~~~~~~~d~vi 70 (289)
T 3e48_A 2 NIMLTG-ATGHLGTHITNQAIANHIDHFHIGVRNVEKVPD----DW------RGKVSVRQLDYFNQESMVEAFKGMDTVV 70 (289)
T ss_dssp CEEEET-TTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCG----GG------BTTBEEEECCTTCHHHHHHHTTTCSEEE
T ss_pred EEEEEc-CCchHHHHHHHHHhhCCCCcEEEEECCHHHHHH----hh------hCCCEEEEcCCCCHHHHHHHHhCCCEEE
Confidence 466555 57887777766652 26789999987753211 11 157899999998742 0013589998
Q ss_pred ecccccCcc-cHHHHHHHHHhcccCC--CEEEEEe
Q 025144 147 MGYGLRNVV-DKRKALEESFRVLKPG--SRISVLD 178 (257)
Q Consensus 147 ~~~~l~~~~-~~~~~l~~~~~~Lk~g--G~l~~~~ 178 (257)
......... .......++.+.++.. +.++...
T Consensus 71 ~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~S 105 (289)
T 3e48_A 71 FIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIG 105 (289)
T ss_dssp ECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred EeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEc
Confidence 765543221 1223334444444433 3555443
No 494
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=73.23 E-value=11 Score=29.57 Aligned_cols=96 Identities=13% Similarity=0.066 Sum_probs=52.4
Q ss_pred CeEEEecCCC-Ch-hHHHHHHHhCCCceEEEEeCChhHHHHHHhhhhh-------hhh------------ccCCCeeEEE
Q 025144 71 DNVLDVCCGS-GD-LSFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDL-------VSK------------ACYKNIEWVE 129 (257)
Q Consensus 71 ~~vLdiG~G~-G~-~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~-------~~~------------~~~~~~~~~~ 129 (257)
.+|.=||+|. |. ++..+++. +.+|+++|.+++.++.+++.+.. .+. ....++.+ .
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~---G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~-~ 91 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAAT---GHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIAT-S 91 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEE-E
T ss_pred CEEEEECCCHHHHHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEE-e
Confidence 4799999885 44 34444433 67999999999988876543321 000 00012322 2
Q ss_pred ccCCCCCCCCCcccEEEecccccCcccHHHHHHHHHhcccCCCEE
Q 025144 130 GDALDLPFSDCFFDAITMGYGLRNVVDKRKALEESFRVLKPGSRI 174 (257)
Q Consensus 130 ~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l 174 (257)
.|..+. -...|+|+..-. ....-...+++++...++++..+
T Consensus 92 ~~~~~~---~~~aD~Vi~avp-~~~~~~~~v~~~l~~~~~~~~iv 132 (302)
T 1f0y_A 92 TDAASV---VHSTDLVVEAIV-ENLKVKNELFKRLDKFAAEHTIF 132 (302)
T ss_dssp SCHHHH---TTSCSEEEECCC-SCHHHHHHHHHHHTTTSCTTCEE
T ss_pred cCHHHh---hcCCCEEEEcCc-CcHHHHHHHHHHHHhhCCCCeEE
Confidence 222211 134798886431 11111346677888888777644
No 495
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=73.22 E-value=25 Score=25.92 Aligned_cols=73 Identities=12% Similarity=0.049 Sum_probs=46.8
Q ss_pred eEEEecCCCChhHHHHHHHh-CCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-------CCCCccc
Q 025144 72 NVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-------FSDCFFD 143 (257)
Q Consensus 72 ~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-------~~~~~~D 143 (257)
+||=.|++ |.+...+++.+ ..+.+|+.++.+++.++.+.+.+. .++.++..|+.+.. .-.+.+|
T Consensus 3 ~vlVTGas-~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~v~~~~~~~~~~~d 74 (230)
T 3guy_A 3 LIVITGAS-SGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLS-------NNVGYRARDLASHQEVEQLFEQLDSIPS 74 (230)
T ss_dssp CEEEESTT-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCS-------SCCCEEECCTTCHHHHHHHHHSCSSCCS
T ss_pred EEEEecCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh-------hccCeEeecCCCHHHHHHHHHHHhhcCC
Confidence 46666654 55555554443 236789999999887776655541 57888999998742 1123459
Q ss_pred EEEeccccc
Q 025144 144 AITMGYGLR 152 (257)
Q Consensus 144 ~v~~~~~l~ 152 (257)
+++.+....
T Consensus 75 ~lv~~Ag~~ 83 (230)
T 3guy_A 75 TVVHSAGSG 83 (230)
T ss_dssp EEEECCCCC
T ss_pred EEEEeCCcC
Confidence 998766543
No 496
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=73.17 E-value=24 Score=26.89 Aligned_cols=76 Identities=17% Similarity=0.121 Sum_probs=45.6
Q ss_pred CCeEEEecCCCChhHHHHHHHh-CCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-----CCCCccc
Q 025144 70 GDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----FSDCFFD 143 (257)
Q Consensus 70 ~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~~~~~D 143 (257)
++++|-=|++.| +...+++.+ ..+++|...|.+.. +.+.+.+...+ .+...+..|+.+.. +..+..|
T Consensus 9 GKvalVTGas~G-IG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g----~~~~~~~~Dv~d~~~v~~~~~~g~iD 81 (247)
T 4hp8_A 9 GRKALVTGANTG-LGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDG----GNASALLIDFADPLAAKDSFTDAGFD 81 (247)
T ss_dssp TCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTT----CCEEEEECCTTSTTTTTTSSTTTCCC
T ss_pred CCEEEEeCcCCH-HHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhC----CcEEEEEccCCCHHHHHHHHHhCCCC
Confidence 555665565544 444443332 23679999998753 22223333222 57888999988642 3457899
Q ss_pred EEEeccccc
Q 025144 144 AITMGYGLR 152 (257)
Q Consensus 144 ~v~~~~~l~ 152 (257)
+++.+..+.
T Consensus 82 iLVNNAGi~ 90 (247)
T 4hp8_A 82 ILVNNAGII 90 (247)
T ss_dssp EEEECCCCC
T ss_pred EEEECCCCC
Confidence 999876544
No 497
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=72.88 E-value=10 Score=29.55 Aligned_cols=80 Identities=14% Similarity=0.018 Sum_probs=43.0
Q ss_pred CCCCCeEEEecCCC-ChhHHHHHHHhCCCc-eEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccE
Q 025144 67 AKTGDNVLDVCCGS-GDLSFLLSEQVGSQG-KVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDA 144 (257)
Q Consensus 67 ~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 144 (257)
...++++|=+|+|- |......+.. .+. +++.++.+++-.+...+.+.... +.+.+...+..++.-.-..+|+
T Consensus 124 ~l~~k~vlVlGaGG~g~aia~~L~~--~G~~~v~i~~R~~~~a~~la~~~~~~~----~~~~i~~~~~~~l~~~l~~~Di 197 (283)
T 3jyo_A 124 NAKLDSVVQVGAGGVGNAVAYALVT--HGVQKLQVADLDTSRAQALADVINNAV----GREAVVGVDARGIEDVIAAADG 197 (283)
T ss_dssp TCCCSEEEEECCSHHHHHHHHHHHH--TTCSEEEEECSSHHHHHHHHHHHHHHH----TSCCEEEECSTTHHHHHHHSSE
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHH--CCCCEEEEEECCHHHHHHHHHHHHhhc----CCceEEEcCHHHHHHHHhcCCE
Confidence 34577999999862 2222222222 244 79999998876665555543322 2333333333332111135899
Q ss_pred EEeccccc
Q 025144 145 ITMGYGLR 152 (257)
Q Consensus 145 v~~~~~l~ 152 (257)
|+..-...
T Consensus 198 VInaTp~G 205 (283)
T 3jyo_A 198 VVNATPMG 205 (283)
T ss_dssp EEECSSTT
T ss_pred EEECCCCC
Confidence 99765544
No 498
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=72.31 E-value=12 Score=28.37 Aligned_cols=77 Identities=13% Similarity=0.005 Sum_probs=51.0
Q ss_pred CCeEEEecCCCChhHHHHHHHh-CCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCC-----C-----C
Q 025144 70 GDNVLDVCCGSGDLSFLLSEQV-GSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLP-----F-----S 138 (257)
Q Consensus 70 ~~~vLdiG~G~G~~~~~l~~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~-----~ 138 (257)
++++|=.|+ +|.+...+++.+ ..+.+|+.+|.+++.++.+.+.+...+ .++.++..|+.+.. + .
T Consensus 6 ~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (257)
T 3imf_A 6 EKVVIITGG-SSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFP----GQILTVQMDVRNTDDIQKMIEQIDEK 80 (257)
T ss_dssp TCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCST----TCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC----CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 456776665 455555554433 236799999999988877776654332 57889999998742 0 0
Q ss_pred CCcccEEEecccc
Q 025144 139 DCFFDAITMGYGL 151 (257)
Q Consensus 139 ~~~~D~v~~~~~l 151 (257)
.+..|+++.+...
T Consensus 81 ~g~id~lv~nAg~ 93 (257)
T 3imf_A 81 FGRIDILINNAAG 93 (257)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 1468999976653
No 499
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=72.21 E-value=7.7 Score=31.48 Aligned_cols=88 Identities=9% Similarity=-0.028 Sum_probs=49.4
Q ss_pred CCeEEEecCCC-Chh-HHHHHHHhCCCceEEEEeCChhHHHHHHhhhhhhhhccCCCeeEEEccCCCCCCCCCcccEEEe
Q 025144 70 GDNVLDVCCGS-GDL-SFLLSEQVGSQGKVIGLDFSKNQLSMASSRQDLVSKACYKNIEWVEGDALDLPFSDCFFDAITM 147 (257)
Q Consensus 70 ~~~vLdiG~G~-G~~-~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 147 (257)
..+|.=||+|. |.. +..|++ .+.+|+++|.+++.++.+.+. .+.. ..+..+..-.....|+|++
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~---~G~~V~v~dr~~~~~~~l~~~----------g~~~-~~s~~e~~~~a~~~DvVi~ 87 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRK---GGHECVVYDLNVNAVQALERE----------GIAG-ARSIEEFCAKLVKPRVVWL 87 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHTT----------TCBC-CSSHHHHHHHSCSSCEEEE
T ss_pred CCEEEEECchHHHHHHHHHHHh---CCCEEEEEeCCHHHHHHHHHC----------CCEE-eCCHHHHHhcCCCCCEEEE
Confidence 35788898763 332 233333 257999999999877665532 1110 1111111000123488886
Q ss_pred cccccCcccHHHHHHHHHhcccCCCEE
Q 025144 148 GYGLRNVVDKRKALEESFRVLKPGSRI 174 (257)
Q Consensus 148 ~~~l~~~~~~~~~l~~~~~~Lk~gG~l 174 (257)
.-.-. ....++..+...+++|..+
T Consensus 88 ~vp~~---~v~~vl~~l~~~l~~g~ii 111 (358)
T 4e21_A 88 MVPAA---VVDSMLQRMTPLLAANDIV 111 (358)
T ss_dssp CSCGG---GHHHHHHHHGGGCCTTCEE
T ss_pred eCCHH---HHHHHHHHHHhhCCCCCEE
Confidence 54333 4566778888888877654
No 500
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=72.10 E-value=3.9 Score=31.55 Aligned_cols=45 Identities=16% Similarity=0.328 Sum_probs=32.1
Q ss_pred CcccEEEeccc----ccCccc-------HHHHHHHHHhcccCCCEEEEEeecCCCc
Q 025144 140 CFFDAITMGYG----LRNVVD-------KRKALEESFRVLKPGSRISVLDFNKSTQ 184 (257)
Q Consensus 140 ~~~D~v~~~~~----l~~~~~-------~~~~l~~~~~~Lk~gG~l~~~~~~~~~~ 184 (257)
+.||+|+++-. .||... ..-+-....+.|+|||.+++......+.
T Consensus 210 grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyADR 265 (324)
T 3trk_A 210 GRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYADR 265 (324)
T ss_dssp CCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCCSH
T ss_pred CceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeeccccc
Confidence 78999998643 455532 2334567778999999999988776553
Done!