Query 025145
Match_columns 257
No_of_seqs 222 out of 1498
Neff 11.1
Searched_HMMs 46136
Date Fri Mar 29 03:04:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025145.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/025145hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF02230 Abhydrolase_2: Phosph 100.0 5.9E-30 1.3E-34 192.3 17.4 207 25-250 5-216 (216)
2 PRK11460 putative hydrolase; P 99.9 5.9E-26 1.3E-30 171.9 19.0 195 28-252 10-211 (232)
3 PHA02857 monoglyceride lipase; 99.9 4.2E-25 9.1E-30 172.6 18.8 191 27-249 18-273 (276)
4 KOG1455 Lysophospholipase [Lip 99.9 3E-25 6.5E-30 165.9 13.9 188 31-249 51-312 (313)
5 PLN02385 hydrolase; alpha/beta 99.9 7.7E-25 1.7E-29 176.3 16.7 191 30-251 83-347 (349)
6 KOG2112 Lysophospholipase [Lip 99.9 1.8E-24 4E-29 153.7 16.1 197 33-248 2-203 (206)
7 PRK10566 esterase; Provisional 99.9 2.7E-24 5.9E-29 165.5 18.0 198 32-250 25-249 (249)
8 TIGR02240 PHA_depoly_arom poly 99.9 2.2E-24 4.7E-29 168.5 16.4 185 32-253 23-266 (276)
9 PLN02298 hydrolase, alpha/beta 99.9 8.2E-24 1.8E-28 169.3 20.0 195 32-254 57-322 (330)
10 PRK13604 luxD acyl transferase 99.9 2.4E-24 5.2E-29 165.4 16.0 192 13-236 14-247 (307)
11 PLN02824 hydrolase, alpha/beta 99.9 5.8E-24 1.3E-28 167.6 17.2 196 27-251 22-292 (294)
12 PRK10749 lysophospholipase L2; 99.9 1.4E-23 3.1E-28 167.6 18.3 194 32-248 52-328 (330)
13 TIGR03611 RutD pyrimidine util 99.9 1E-23 2.2E-28 162.7 16.8 185 32-251 11-256 (257)
14 COG2267 PldB Lysophospholipase 99.9 1.7E-23 3.6E-28 163.4 17.5 194 26-251 26-296 (298)
15 COG0400 Predicted esterase [Ge 99.9 2.9E-23 6.2E-28 151.7 17.1 194 28-250 12-206 (207)
16 PLN02652 hydrolase; alpha/beta 99.9 1.5E-23 3.3E-28 169.7 17.3 197 30-252 132-390 (395)
17 PLN02965 Probable pheophorbida 99.9 1.6E-23 3.5E-28 161.7 16.3 184 35-251 4-251 (255)
18 PRK00870 haloalkane dehalogena 99.9 3.5E-23 7.6E-28 163.7 18.0 196 25-251 36-299 (302)
19 PRK10349 carboxylesterase BioH 99.9 2.7E-23 5.9E-28 160.6 16.0 181 27-248 6-251 (256)
20 TIGR02427 protocat_pcaD 3-oxoa 99.9 8.9E-23 1.9E-27 156.6 16.3 182 33-250 12-250 (251)
21 TIGR03056 bchO_mg_che_rel puta 99.9 1.9E-22 4.1E-27 157.6 18.2 183 33-250 27-277 (278)
22 PRK10673 acyl-CoA esterase; Pr 99.9 1.2E-22 2.7E-27 156.8 16.3 183 32-251 14-253 (255)
23 TIGR01738 bioH putative pimelo 99.9 2.5E-22 5.5E-27 153.6 17.1 176 33-249 3-244 (245)
24 TIGR02821 fghA_ester_D S-formy 99.9 1.8E-21 3.8E-26 151.5 20.6 206 31-249 39-274 (275)
25 TIGR03343 biphenyl_bphD 2-hydr 99.9 4E-22 8.6E-27 156.3 17.0 191 25-250 22-280 (282)
26 PF12697 Abhydrolase_6: Alpha/ 99.9 1.6E-22 3.5E-27 152.8 13.7 175 37-245 1-228 (228)
27 PRK03592 haloalkane dehalogena 99.9 4.6E-22 1E-26 156.9 16.1 181 34-249 27-285 (295)
28 COG1647 Esterase/lipase [Gener 99.9 2.2E-22 4.7E-27 143.7 12.3 181 35-247 16-242 (243)
29 PLN02679 hydrolase, alpha/beta 99.9 1.2E-21 2.5E-26 158.2 17.3 187 34-250 88-354 (360)
30 PF01738 DLH: Dienelactone hyd 99.9 6.2E-22 1.4E-26 149.2 13.7 197 26-250 5-218 (218)
31 PLN02211 methyl indole-3-aceta 99.9 1.7E-21 3.7E-26 151.4 16.6 186 32-251 16-268 (273)
32 COG1506 DAP2 Dipeptidyl aminop 99.9 1.5E-21 3.3E-26 167.1 17.6 195 34-252 394-619 (620)
33 PLN02578 hydrolase 99.9 2.3E-21 5E-26 156.3 17.5 180 34-250 86-352 (354)
34 PRK05077 frsA fermentation/res 99.9 2.7E-21 5.9E-26 157.8 18.0 197 20-250 180-413 (414)
35 PRK11126 2-succinyl-6-hydroxy- 99.9 2.9E-21 6.3E-26 148.0 16.8 173 34-250 2-239 (242)
36 PRK03204 haloalkane dehalogena 99.9 3E-21 6.5E-26 151.3 17.1 190 25-250 26-285 (286)
37 PLN02442 S-formylglutathione h 99.9 9.5E-21 2.1E-25 147.7 19.4 207 31-250 44-281 (283)
38 KOG1454 Predicted hydrolase/ac 99.9 4.2E-21 9.1E-26 151.4 16.7 186 32-250 56-321 (326)
39 PLN03087 BODYGUARD 1 domain co 99.9 4.4E-21 9.5E-26 157.6 17.4 186 32-251 199-477 (481)
40 TIGR03695 menH_SHCHC 2-succiny 99.9 5.5E-21 1.2E-25 146.5 16.8 181 35-250 2-250 (251)
41 PF12695 Abhydrolase_5: Alpha/ 99.9 1.3E-21 2.9E-26 138.1 12.3 145 36-233 1-145 (145)
42 PRK06489 hypothetical protein; 99.9 1E-20 2.2E-25 153.0 18.6 190 34-252 69-356 (360)
43 PRK14875 acetoin dehydrogenase 99.9 7E-21 1.5E-25 155.0 16.7 181 32-251 129-369 (371)
44 KOG4178 Soluble epoxide hydrol 99.9 1E-20 2.2E-25 143.9 16.1 190 29-250 39-317 (322)
45 PLN03084 alpha/beta hydrolase 99.9 1.7E-20 3.7E-25 151.1 18.3 186 33-251 126-382 (383)
46 TIGR01607 PST-A Plasmodium sub 99.9 1.2E-20 2.7E-25 150.4 16.3 196 32-247 19-331 (332)
47 PF00326 Peptidase_S9: Prolyl 99.9 3.2E-21 7E-26 144.8 11.9 181 50-252 3-212 (213)
48 TIGR01250 pro_imino_pep_2 prol 99.9 3.5E-20 7.6E-25 145.2 17.1 185 33-250 24-287 (288)
49 KOG4409 Predicted hydrolase/ac 99.9 3.7E-20 8E-25 141.4 15.9 189 29-248 85-359 (365)
50 KOG1552 Predicted alpha/beta h 99.9 2.9E-20 6.2E-25 136.7 14.5 194 24-252 50-255 (258)
51 PRK08775 homoserine O-acetyltr 99.9 2.2E-20 4.8E-25 150.1 15.0 194 24-252 47-338 (343)
52 PRK11071 esterase YqiA; Provis 99.9 2E-20 4.3E-25 137.2 13.1 161 35-247 2-189 (190)
53 COG0412 Dienelactone hydrolase 99.8 2.9E-19 6.2E-24 134.9 18.2 207 19-251 12-235 (236)
54 PLN02894 hydrolase, alpha/beta 99.8 2.6E-19 5.7E-24 146.1 18.8 191 32-253 103-389 (402)
55 TIGR01249 pro_imino_pep_1 prol 99.8 3.5E-19 7.6E-24 141.0 18.7 183 34-250 27-306 (306)
56 TIGR01392 homoserO_Ac_trn homo 99.8 2.1E-19 4.5E-24 144.9 17.2 199 33-250 30-350 (351)
57 PRK07581 hypothetical protein; 99.8 3.5E-19 7.6E-24 143.1 17.4 194 33-250 40-337 (339)
58 PLN02511 hydrolase 99.8 2.1E-19 4.6E-24 146.1 15.2 191 32-253 98-369 (388)
59 PRK10985 putative hydrolase; P 99.8 4.5E-19 9.7E-24 141.3 16.1 191 32-251 56-322 (324)
60 TIGR01840 esterase_phb esteras 99.8 3E-19 6.6E-24 133.8 13.9 169 31-217 10-197 (212)
61 PRK10162 acetyl esterase; Prov 99.8 1.7E-18 3.6E-23 137.4 18.0 200 26-251 73-317 (318)
62 PRK00175 metX homoserine O-ace 99.8 2.4E-18 5.2E-23 139.9 18.7 200 34-250 48-371 (379)
63 PLN02980 2-oxoglutarate decarb 99.8 6.9E-19 1.5E-23 164.0 17.5 192 33-248 1370-1638(1655)
64 PRK05855 short chain dehydroge 99.8 1.2E-18 2.7E-23 149.8 13.5 91 33-140 24-114 (582)
65 PF05448 AXE1: Acetyl xylan es 99.8 5.5E-18 1.2E-22 133.2 15.0 211 20-249 68-320 (320)
66 TIGR03100 hydr1_PEP hydrolase, 99.8 1.5E-17 3.4E-22 129.4 16.9 187 29-247 21-273 (274)
67 COG3458 Acetyl esterase (deace 99.8 8.4E-18 1.8E-22 123.8 13.4 217 17-250 65-318 (321)
68 COG3208 GrsT Predicted thioest 99.8 2.7E-17 5.9E-22 120.3 15.9 189 32-252 5-235 (244)
69 PRK10115 protease 2; Provision 99.8 4E-17 8.8E-22 141.0 16.6 215 16-252 424-678 (686)
70 PLN00021 chlorophyllase 99.7 1.4E-16 3E-21 125.2 15.2 183 22-234 40-241 (313)
71 PF06821 Ser_hydrolase: Serine 99.7 1.2E-16 2.6E-21 114.4 13.6 164 37-247 1-170 (171)
72 PRK06765 homoserine O-acetyltr 99.7 8.7E-16 1.9E-20 124.3 20.0 207 32-251 54-386 (389)
73 PF06500 DUF1100: Alpha/beta h 99.7 5.2E-17 1.1E-21 128.9 12.6 198 19-250 175-410 (411)
74 KOG2551 Phospholipase/carboxyh 99.7 3.1E-16 6.8E-21 112.6 14.9 199 33-252 4-223 (230)
75 KOG4391 Predicted alpha/beta h 99.7 1.9E-17 4.1E-22 118.1 8.6 189 31-251 75-284 (300)
76 KOG3043 Predicted hydrolase re 99.7 1.8E-16 3.8E-21 113.8 12.9 194 24-250 30-241 (242)
77 PLN02872 triacylglycerol lipas 99.7 5.6E-17 1.2E-21 131.2 11.1 61 188-252 325-392 (395)
78 PF03959 FSH1: Serine hydrolas 99.7 2.6E-17 5.6E-22 123.0 8.0 183 33-235 3-203 (212)
79 TIGR03101 hydr2_PEP hydrolase, 99.7 1.3E-15 2.7E-20 116.7 17.1 172 30-230 21-243 (266)
80 KOG2984 Predicted hydrolase [G 99.7 2.1E-16 4.6E-21 111.5 10.5 190 27-248 35-275 (277)
81 TIGR01836 PHA_synth_III_C poly 99.7 3.8E-16 8.2E-21 126.0 13.5 183 33-248 61-349 (350)
82 KOG2382 Predicted alpha/beta h 99.7 1.6E-15 3.5E-20 115.8 15.2 187 30-251 48-311 (315)
83 KOG4667 Predicted esterase [Li 99.7 1.4E-15 3E-20 108.5 11.4 167 34-235 33-241 (269)
84 PF10503 Esterase_phd: Esteras 99.7 7.7E-15 1.7E-19 108.7 15.4 164 33-216 15-197 (220)
85 PF05728 UPF0227: Uncharacteri 99.6 1.2E-14 2.5E-19 105.3 14.0 158 37-246 2-186 (187)
86 COG2945 Predicted hydrolase of 99.6 1.3E-14 2.8E-19 101.9 12.4 172 31-247 25-205 (210)
87 COG3571 Predicted hydrolase of 99.6 9.1E-14 2E-18 94.6 15.2 175 26-235 6-183 (213)
88 COG0429 Predicted hydrolase of 99.6 1.6E-14 3.4E-19 110.3 12.9 195 29-252 70-343 (345)
89 TIGR01838 PHA_synth_I poly(R)- 99.6 2.9E-14 6.3E-19 118.8 15.3 181 23-235 175-457 (532)
90 PRK07868 acyl-CoA synthetase; 99.6 2.2E-14 4.7E-19 129.8 15.5 184 33-251 66-363 (994)
91 PF00561 Abhydrolase_1: alpha/ 99.6 1.5E-14 3.3E-19 109.7 12.3 154 62-246 1-228 (230)
92 COG0657 Aes Esterase/lipase [L 99.6 1.1E-13 2.3E-18 110.1 17.5 188 32-247 77-308 (312)
93 KOG1515 Arylacetamide deacetyl 99.6 1.4E-13 3.1E-18 108.0 16.9 191 32-248 88-334 (336)
94 PF07859 Abhydrolase_3: alpha/ 99.6 4.8E-15 1E-19 111.2 8.3 171 37-235 1-210 (211)
95 KOG2100 Dipeptidyl aminopeptid 99.6 9.5E-14 2.1E-18 120.8 16.2 199 31-253 523-751 (755)
96 PF06342 DUF1057: Alpha/beta h 99.6 4.7E-13 1E-17 100.3 17.3 191 29-250 30-296 (297)
97 COG4099 Predicted peptidase [G 99.6 9.5E-14 2.1E-18 103.9 12.5 174 34-248 191-384 (387)
98 KOG2564 Predicted acetyltransf 99.5 1.7E-13 3.7E-18 101.8 12.7 93 31-140 71-166 (343)
99 PF08840 BAAT_C: BAAT / Acyl-C 99.5 7.9E-13 1.7E-17 98.7 13.7 121 119-251 21-212 (213)
100 PF12740 Chlorophyllase2: Chlo 99.5 1.2E-12 2.6E-17 98.4 13.9 181 23-233 6-205 (259)
101 KOG3847 Phospholipase A2 (plat 99.5 7.4E-13 1.6E-17 99.9 12.0 181 29-235 113-330 (399)
102 KOG1838 Alpha/beta hydrolase [ 99.5 2.7E-12 5.8E-17 101.7 14.4 193 32-251 123-390 (409)
103 PF12715 Abhydrolase_7: Abhydr 99.5 3.4E-13 7.4E-18 105.7 9.1 182 21-229 101-343 (390)
104 PF03403 PAF-AH_p_II: Platelet 99.5 2.8E-13 6E-18 109.2 8.6 177 32-234 98-316 (379)
105 PRK05371 x-prolyl-dipeptidyl a 99.4 6.7E-12 1.5E-16 109.7 16.4 176 53-253 271-523 (767)
106 COG3545 Predicted esterase of 99.4 1.4E-11 3E-16 85.8 14.1 131 99-248 40-178 (181)
107 COG0596 MhpC Predicted hydrola 99.4 2.6E-11 5.7E-16 93.2 17.5 179 34-248 21-277 (282)
108 PF07224 Chlorophyllase: Chlor 99.4 4.3E-12 9.4E-17 93.7 12.1 179 24-235 36-232 (307)
109 PRK04940 hypothetical protein; 99.4 3.6E-11 7.8E-16 85.5 16.3 106 120-247 60-178 (180)
110 KOG4627 Kynurenine formamidase 99.4 1.8E-12 3.9E-17 92.1 9.4 183 32-249 65-267 (270)
111 TIGR00976 /NonD putative hydro 99.4 1.9E-11 4.1E-16 104.3 16.0 113 25-164 13-130 (550)
112 KOG2281 Dipeptidyl aminopeptid 99.4 9.4E-12 2E-16 102.3 12.7 196 31-248 639-866 (867)
113 PF00975 Thioesterase: Thioest 99.4 1.5E-11 3.2E-16 93.5 13.0 183 35-250 1-229 (229)
114 PF02129 Peptidase_S15: X-Pro 99.4 3.4E-11 7.3E-16 93.8 14.3 182 23-233 7-271 (272)
115 PRK10439 enterobactin/ferric e 99.4 1.4E-10 3.1E-15 94.6 18.2 129 105-247 269-407 (411)
116 KOG3101 Esterase D [General fu 99.4 1.3E-11 2.9E-16 88.1 10.5 206 31-250 41-280 (283)
117 TIGR01839 PHA_synth_II poly(R) 99.3 3.3E-11 7.2E-16 99.9 13.8 176 24-233 203-481 (560)
118 cd00707 Pancreat_lipase_like P 99.3 6.1E-12 1.3E-16 97.7 8.4 113 31-169 33-150 (275)
119 PF03583 LIP: Secretory lipase 99.3 6E-11 1.3E-15 92.7 13.8 67 187-254 218-286 (290)
120 COG4188 Predicted dienelactone 99.3 2.7E-11 5.8E-16 94.6 11.5 197 17-235 48-296 (365)
121 PF10230 DUF2305: Uncharacteri 99.3 8.9E-11 1.9E-15 90.7 13.9 180 33-234 1-265 (266)
122 PF02273 Acyl_transf_2: Acyl t 99.3 8.2E-11 1.8E-15 86.2 12.7 171 33-235 29-239 (294)
123 TIGR03230 lipo_lipase lipoprot 99.3 3.4E-11 7.4E-16 98.0 10.9 112 32-169 39-157 (442)
124 PF06028 DUF915: Alpha/beta hy 99.3 5.3E-11 1.1E-15 90.4 11.3 201 33-246 10-252 (255)
125 TIGR03502 lipase_Pla1_cef extr 99.2 4.8E-11 1E-15 103.0 10.0 109 33-141 448-576 (792)
126 PF06057 VirJ: Bacterial virul 99.2 1.1E-10 2.4E-15 83.2 9.6 165 35-237 3-177 (192)
127 COG0627 Predicted esterase [Ge 99.2 8.2E-10 1.8E-14 86.5 15.1 209 31-253 51-315 (316)
128 PF07819 PGAP1: PGAP1-like pro 99.2 2.9E-10 6.2E-15 85.5 12.1 153 33-207 3-177 (225)
129 COG3509 LpqC Poly(3-hydroxybut 99.2 2.2E-10 4.8E-15 86.4 10.0 128 22-167 48-180 (312)
130 COG4757 Predicted alpha/beta h 99.2 8E-10 1.7E-14 80.3 12.3 215 17-246 14-280 (281)
131 PF08538 DUF1749: Protein of u 99.2 2.4E-10 5.3E-15 87.7 10.3 179 33-238 32-286 (303)
132 TIGR01849 PHB_depoly_PhaZ poly 99.2 1.2E-09 2.6E-14 88.1 14.1 203 19-248 83-405 (406)
133 COG2021 MET2 Homoserine acetyl 99.1 4.4E-09 9.6E-14 82.2 15.3 118 32-164 49-180 (368)
134 PF00756 Esterase: Putative es 99.1 2.2E-10 4.7E-15 88.3 7.2 129 105-246 98-251 (251)
135 PF12146 Hydrolase_4: Putative 99.1 2E-10 4.4E-15 71.1 5.5 71 26-113 8-78 (79)
136 PF09752 DUF2048: Uncharacteri 99.1 1.3E-09 2.8E-14 85.0 10.8 177 32-233 90-328 (348)
137 KOG2624 Triglyceride lipase-ch 99.1 6E-10 1.3E-14 89.6 9.1 117 30-164 69-197 (403)
138 KOG3253 Predicted alpha/beta h 99.1 2.4E-09 5.3E-14 87.9 12.1 100 118-235 248-347 (784)
139 PF12048 DUF3530: Protein of u 99.0 1.3E-07 2.9E-12 74.6 20.4 214 19-249 72-309 (310)
140 KOG3975 Uncharacterized conser 99.0 4.4E-08 9.5E-13 72.2 14.1 197 28-246 23-296 (301)
141 COG3150 Predicted esterase [Ge 99.0 2E-08 4.3E-13 69.4 10.9 158 37-246 2-186 (191)
142 PRK10252 entF enterobactin syn 99.0 1.3E-08 2.9E-13 95.7 13.7 183 34-251 1068-1295(1296)
143 PF10340 DUF2424: Protein of u 98.9 8.1E-08 1.8E-12 76.3 15.4 186 33-246 121-363 (374)
144 COG4814 Uncharacterized protei 98.9 9E-08 1.9E-12 70.8 13.8 201 34-248 45-286 (288)
145 KOG2237 Predicted serine prote 98.9 5.1E-08 1.1E-12 80.9 12.6 218 14-252 447-708 (712)
146 COG1770 PtrB Protease II [Amin 98.8 2E-07 4.3E-12 78.0 15.1 199 16-235 427-658 (682)
147 PF03096 Ndr: Ndr family; Int 98.8 3.4E-08 7.3E-13 75.3 9.7 186 32-249 21-275 (283)
148 COG2382 Fes Enterochelin ester 98.8 1.6E-07 3.5E-12 71.6 11.7 122 99-235 152-282 (299)
149 COG1505 Serine proteases of th 98.8 5E-08 1.1E-12 80.5 9.5 214 15-250 401-647 (648)
150 COG3243 PhaC Poly(3-hydroxyalk 98.7 1.3E-07 2.8E-12 75.2 10.6 64 183-251 325-401 (445)
151 PF05990 DUF900: Alpha/beta hy 98.7 3.9E-07 8.4E-12 69.1 12.9 147 32-204 16-169 (233)
152 PF11144 DUF2920: Protein of u 98.7 4.3E-07 9.3E-12 72.5 13.0 40 187-227 292-331 (403)
153 PF00151 Lipase: Lipase; Inte 98.6 2.7E-08 5.9E-13 79.0 4.1 113 32-170 69-191 (331)
154 KOG2931 Differentiation-relate 98.6 3.6E-06 7.8E-11 63.9 14.9 180 33-244 45-297 (326)
155 PTZ00472 serine carboxypeptida 98.6 1.2E-05 2.6E-10 67.2 18.6 65 188-252 364-458 (462)
156 COG2272 PnbA Carboxylesterase 98.6 1.5E-07 3.2E-12 76.5 6.2 120 30-167 90-218 (491)
157 COG1073 Hydrolases of the alph 98.5 3.9E-07 8.4E-12 71.8 7.3 64 184-250 227-298 (299)
158 PF05057 DUF676: Putative seri 98.5 3.1E-07 6.6E-12 69.0 6.2 87 32-140 2-98 (217)
159 cd00312 Esterase_lipase Estera 98.5 1.6E-06 3.4E-11 73.6 11.3 116 31-166 92-213 (493)
160 PF01674 Lipase_2: Lipase (cla 98.5 4.4E-08 9.6E-13 72.8 1.4 87 35-140 2-95 (219)
161 COG3319 Thioesterase domains o 98.5 1.1E-06 2.4E-11 66.9 8.7 104 35-167 1-104 (257)
162 smart00824 PKS_TE Thioesterase 98.4 4.2E-06 9E-11 62.4 10.2 175 39-247 2-209 (212)
163 PF05705 DUF829: Eukaryotic pr 98.4 1.1E-05 2.3E-10 61.9 12.5 186 37-245 2-239 (240)
164 COG2819 Predicted hydrolase of 98.4 2.6E-05 5.6E-10 59.0 13.9 127 105-247 120-259 (264)
165 COG3946 VirJ Type IV secretory 98.4 9.1E-06 2E-10 64.4 11.5 185 20-238 246-435 (456)
166 PF10142 PhoPQ_related: PhoPQ- 98.3 8.9E-06 1.9E-10 65.1 11.3 212 25-252 54-323 (367)
167 PF00135 COesterase: Carboxyle 98.3 2.1E-06 4.5E-11 73.6 7.9 115 33-165 124-244 (535)
168 PF11339 DUF3141: Protein of u 98.3 0.00011 2.3E-09 60.6 16.1 50 183-233 292-348 (581)
169 PF00450 Peptidase_S10: Serine 98.3 2.2E-05 4.8E-10 65.2 12.3 64 188-251 330-414 (415)
170 KOG4840 Predicted hydrolases o 98.2 7.3E-05 1.6E-09 54.7 12.6 87 33-140 35-127 (299)
171 PLN02633 palmitoyl protein thi 98.2 9.1E-05 2E-09 57.4 13.8 99 35-164 26-129 (314)
172 PF05677 DUF818: Chlamydia CHL 98.2 0.0002 4.3E-09 56.1 14.9 195 29-250 132-364 (365)
173 COG1075 LipA Predicted acetylt 98.2 1E-05 2.2E-10 64.9 7.9 102 34-165 59-163 (336)
174 KOG3724 Negative regulator of 98.2 7.9E-06 1.7E-10 69.9 7.5 152 34-207 89-276 (973)
175 PLN02733 phosphatidylcholine-s 98.1 7.3E-06 1.6E-10 67.6 6.5 96 45-165 105-200 (440)
176 COG4782 Uncharacterized protei 98.1 0.00012 2.5E-09 57.7 11.7 120 32-168 114-236 (377)
177 PF07082 DUF1350: Protein of u 98.0 0.00022 4.7E-09 53.5 12.2 188 32-250 15-233 (250)
178 COG4947 Uncharacterized protei 98.0 1.6E-05 3.6E-10 55.5 5.8 167 36-233 28-215 (227)
179 KOG2565 Predicted hydrolases o 98.0 3.4E-05 7.3E-10 60.7 7.9 89 35-141 153-250 (469)
180 KOG2541 Palmitoyl protein thio 98.0 0.00024 5.3E-09 53.5 11.3 87 35-141 24-113 (296)
181 PF02089 Palm_thioest: Palmito 97.9 4.7E-05 1E-09 58.4 7.5 102 35-164 6-114 (279)
182 COG2936 Predicted acyl esteras 97.9 7.6E-05 1.6E-09 62.7 8.5 122 18-165 29-158 (563)
183 PF04301 DUF452: Protein of un 97.9 0.00013 2.8E-09 53.9 8.7 36 192-235 169-204 (213)
184 cd00741 Lipase Lipase. Lipase 97.8 0.00012 2.6E-09 51.8 8.0 74 118-204 26-99 (153)
185 PLN02209 serine carboxypeptida 97.8 0.0043 9.4E-08 51.6 17.1 63 188-251 351-433 (437)
186 PLN03016 sinapoylglucose-malat 97.7 0.0049 1.1E-07 51.3 16.8 64 187-251 346-429 (433)
187 PF08386 Abhydrolase_4: TAP-li 97.7 0.00014 3.1E-09 47.6 5.9 56 188-248 34-93 (103)
188 KOG1553 Predicted alpha/beta h 97.6 0.00042 9.1E-09 54.2 8.3 144 32-205 241-400 (517)
189 KOG1282 Serine carboxypeptidas 97.5 0.015 3.3E-07 48.3 16.7 97 32-140 71-188 (454)
190 KOG1516 Carboxylesterase and r 97.5 0.00067 1.5E-08 58.5 8.8 97 34-139 112-214 (545)
191 PLN02606 palmitoyl-protein thi 97.5 0.00073 1.6E-08 52.5 7.9 54 99-164 77-130 (306)
192 PF01764 Lipase_3: Lipase (cla 97.2 0.00089 1.9E-08 46.5 5.3 37 104-141 49-85 (140)
193 PF02450 LCAT: Lecithin:choles 97.1 0.00095 2.1E-08 54.8 5.6 43 119-166 118-160 (389)
194 PF11187 DUF2974: Protein of u 97.1 0.0018 3.9E-08 48.8 6.1 56 101-165 67-122 (224)
195 KOG2521 Uncharacterized conser 97.1 0.046 1E-06 43.8 14.1 64 188-252 225-293 (350)
196 KOG3967 Uncharacterized conser 96.9 0.0086 1.9E-07 43.8 8.0 23 119-141 189-211 (297)
197 COG4287 PqaA PhoPQ-activated p 96.9 0.0024 5.1E-08 50.6 5.6 60 185-248 326-386 (507)
198 PF11288 DUF3089: Protein of u 96.9 0.0023 5E-08 47.1 5.2 40 101-140 76-115 (207)
199 KOG2183 Prolylcarboxypeptidase 96.8 0.0072 1.6E-07 48.7 7.6 132 17-164 61-200 (492)
200 PF05577 Peptidase_S28: Serine 96.8 0.005 1.1E-07 51.6 7.0 128 20-167 13-149 (434)
201 TIGR03712 acc_sec_asp2 accesso 96.5 0.18 3.9E-06 42.0 13.7 97 24-141 279-378 (511)
202 KOG1551 Uncharacterized conser 96.5 0.14 3E-06 39.2 12.0 52 191-248 309-365 (371)
203 cd00519 Lipase_3 Lipase (class 96.5 0.0057 1.2E-07 46.4 4.9 23 119-141 127-149 (229)
204 PLN02517 phosphatidylcholine-s 96.4 0.0064 1.4E-07 51.7 5.1 22 119-140 212-233 (642)
205 KOG2369 Lecithin:cholesterol a 96.3 0.009 1.9E-07 49.1 5.2 23 120-142 182-204 (473)
206 PLN02162 triacylglycerol lipas 96.0 0.013 2.9E-07 48.3 5.0 37 103-140 262-298 (475)
207 PLN00413 triacylglycerol lipas 96.0 0.014 3.1E-07 48.3 5.0 36 104-140 269-304 (479)
208 PLN02310 triacylglycerol lipas 96.0 0.015 3.3E-07 47.4 5.0 36 105-140 191-229 (405)
209 PLN02571 triacylglycerol lipas 95.9 0.012 2.7E-07 48.0 4.5 39 103-141 208-247 (413)
210 PLN02454 triacylglycerol lipas 95.9 0.013 2.9E-07 47.8 4.7 37 104-140 211-248 (414)
211 PLN02934 triacylglycerol lipas 95.9 0.015 3.3E-07 48.5 4.8 37 103-140 305-341 (515)
212 PF01083 Cutinase: Cutinase; 95.9 0.031 6.8E-07 40.6 6.0 87 102-203 64-150 (179)
213 PLN02408 phospholipase A1 95.9 0.016 3.4E-07 46.7 4.7 38 104-141 183-221 (365)
214 PLN03037 lipase class 3 family 95.7 0.022 4.8E-07 47.7 5.0 21 120-140 318-338 (525)
215 PLN02324 triacylglycerol lipas 95.6 0.02 4.2E-07 46.8 4.6 38 103-140 197-235 (415)
216 PLN02802 triacylglycerol lipas 95.3 0.029 6.3E-07 46.9 4.7 37 105-141 314-351 (509)
217 PLN02753 triacylglycerol lipas 95.3 0.032 6.8E-07 46.9 4.6 38 103-140 291-332 (531)
218 KOG1202 Animal-type fatty acid 95.0 0.14 3E-06 47.4 8.0 98 31-164 2120-2217(2376)
219 PF05576 Peptidase_S37: PS-10 94.8 0.13 2.8E-06 42.0 6.7 106 30-162 59-165 (448)
220 PF05277 DUF726: Protein of un 94.8 0.09 2E-06 42.2 5.9 73 119-204 219-291 (345)
221 PLN02761 lipase class 3 family 94.6 0.059 1.3E-06 45.3 4.6 37 104-140 273-314 (527)
222 PLN02719 triacylglycerol lipas 94.6 0.059 1.3E-06 45.2 4.6 39 103-141 277-319 (518)
223 PF07519 Tannase: Tannase and 94.6 0.088 1.9E-06 44.6 5.7 63 187-249 352-427 (474)
224 PF04083 Abhydro_lipase: Parti 94.5 0.04 8.8E-07 32.3 2.5 20 31-50 40-59 (63)
225 KOG4372 Predicted alpha/beta h 94.4 0.079 1.7E-06 42.9 4.7 28 31-58 77-105 (405)
226 PLN02847 triacylglycerol lipas 94.4 0.077 1.7E-06 45.3 4.8 22 120-141 251-272 (633)
227 KOG4540 Putative lipase essent 94.3 0.092 2E-06 40.5 4.6 37 105-141 261-297 (425)
228 COG5153 CVT17 Putative lipase 94.3 0.092 2E-06 40.5 4.6 37 105-141 261-297 (425)
229 COG2939 Carboxypeptidase C (ca 94.2 0.33 7.1E-06 40.7 8.0 97 33-141 100-219 (498)
230 KOG4388 Hormone-sensitive lipa 93.9 0.087 1.9E-06 44.7 4.2 63 188-253 787-858 (880)
231 PF06259 Abhydrolase_8: Alpha/ 93.7 1 2.3E-05 32.6 8.9 63 119-202 108-171 (177)
232 KOG4569 Predicted lipase [Lipi 93.5 0.13 2.8E-06 41.5 4.5 22 120-141 171-192 (336)
233 PF08237 PE-PPE: PE-PPE domain 93.0 0.57 1.2E-05 35.4 7.0 44 99-142 26-70 (225)
234 PF03283 PAE: Pectinacetyleste 92.5 4.8 0.0001 33.0 12.0 23 118-140 154-176 (361)
235 PLN02213 sinapoylglucose-malat 92.4 1.1 2.5E-05 35.9 8.5 64 188-252 233-316 (319)
236 PF06850 PHB_depo_C: PHB de-po 92.4 0.24 5.3E-06 36.1 4.1 63 186-248 132-201 (202)
237 PLN02213 sinapoylglucose-malat 92.0 0.59 1.3E-05 37.5 6.3 43 99-141 28-72 (319)
238 KOG1283 Serine carboxypeptidas 90.3 8.1 0.00018 30.9 11.9 60 186-245 323-406 (414)
239 KOG2029 Uncharacterized conser 90.2 1.6 3.5E-05 37.6 7.2 39 102-140 506-546 (697)
240 KOG4389 Acetylcholinesterase/B 89.8 2.7 5.9E-05 35.4 8.1 93 34-135 135-233 (601)
241 PF10605 3HBOH: 3HB-oligomer h 89.0 1.1 2.4E-05 38.6 5.5 48 186-233 553-603 (690)
242 PF06441 EHN: Epoxide hydrolas 88.9 0.63 1.4E-05 30.9 3.4 26 28-53 86-111 (112)
243 KOG2182 Hydrolytic enzymes of 88.4 1.8 4E-05 36.4 6.3 111 31-166 83-207 (514)
244 COG2830 Uncharacterized protei 84.1 1.9 4.2E-05 30.5 3.7 19 121-139 58-76 (214)
245 COG4553 DepA Poly-beta-hydroxy 84.1 19 0.00042 28.5 11.4 62 188-252 339-410 (415)
246 PF09994 DUF2235: Uncharacteri 78.4 4.8 0.0001 31.6 4.7 29 112-140 84-112 (277)
247 COG0529 CysC Adenylylsulfate k 78.2 8.2 0.00018 28.1 5.3 38 32-69 20-59 (197)
248 PF07519 Tannase: Tannase and 77.2 5 0.00011 34.2 4.8 36 120-166 115-150 (474)
249 cd03557 L-arabinose_isomerase 76.9 48 0.001 28.6 12.3 131 97-249 16-161 (484)
250 PF06309 Torsin: Torsin; Inte 75.0 2.6 5.7E-05 28.6 2.1 22 30-51 48-69 (127)
251 PF02610 Arabinose_Isome: L-ar 69.3 62 0.0013 26.5 10.5 84 153-249 70-167 (359)
252 KOG2385 Uncharacterized conser 69.1 13 0.00028 31.8 5.2 46 119-170 446-491 (633)
253 PF00698 Acyl_transf_1: Acyl t 68.8 43 0.00093 26.9 8.1 29 110-139 75-103 (318)
254 PF04378 RsmJ: Ribosomal RNA s 64.4 64 0.0014 24.9 8.6 116 121-254 104-236 (245)
255 COG4822 CbiK Cobalamin biosynt 57.9 80 0.0017 23.8 8.4 118 100-233 118-242 (265)
256 PF10081 Abhydrolase_9: Alpha/ 57.4 37 0.0008 26.8 5.4 91 53-164 53-145 (289)
257 COG3673 Uncharacterized conser 55.0 35 0.00075 27.5 5.0 25 115-139 117-141 (423)
258 PRK12467 peptide synthase; Pro 54.2 42 0.00091 37.2 7.0 88 33-141 3691-3778(3956)
259 KOG2170 ATPase of the AAA+ sup 53.9 9.9 0.00021 30.2 1.9 23 29-51 104-126 (344)
260 PF09370 TIM-br_sig_trns: TIM- 53.5 78 0.0017 24.7 6.6 104 106-232 4-120 (268)
261 TIGR03709 PPK2_rel_1 polyphosp 53.1 31 0.00066 27.0 4.5 38 33-70 54-93 (264)
262 KOG4388 Hormone-sensitive lipa 53.0 65 0.0014 28.4 6.6 90 31-141 393-490 (880)
263 COG0536 Obg Predicted GTPase [ 52.4 61 0.0013 26.4 6.0 113 124-249 218-335 (369)
264 TIGR03707 PPK2_P_aer polyphosp 51.9 80 0.0017 24.1 6.5 38 33-70 29-68 (230)
265 PF06500 DUF1100: Alpha/beta h 50.8 25 0.00054 29.4 3.8 60 187-248 188-254 (411)
266 PF01583 APS_kinase: Adenylyls 50.1 11 0.00024 26.7 1.6 35 34-68 1-37 (156)
267 PF03976 PPK2: Polyphosphate k 50.0 20 0.00043 27.3 3.0 38 33-70 29-68 (228)
268 PRK02929 L-arabinose isomerase 49.4 1.8E+02 0.0039 25.3 12.1 84 153-249 70-167 (499)
269 TIGR03131 malonate_mdcH malona 48.7 23 0.00049 28.0 3.3 28 111-139 68-95 (295)
270 smart00827 PKS_AT Acyl transfe 47.3 24 0.00051 27.9 3.3 28 111-139 74-101 (298)
271 PF12694 MoCo_carrier: Putativ 45.2 1.1E+02 0.0023 21.5 6.2 60 183-250 85-144 (145)
272 PF12242 Eno-Rase_NADH_b: NAD( 45.1 66 0.0014 19.7 4.0 21 119-139 39-59 (78)
273 COG2961 ComJ Protein involved 43.3 1.6E+02 0.0034 23.0 9.8 98 153-254 152-267 (279)
274 COG2160 AraA L-arabinose isome 42.0 2.1E+02 0.0046 24.0 9.7 147 84-249 9-167 (497)
275 TIGR00128 fabD malonyl CoA-acy 41.9 30 0.00065 27.1 3.1 19 121-139 84-102 (290)
276 PF14253 AbiH: Bacteriophage a 41.2 31 0.00067 26.8 3.0 15 120-134 235-249 (270)
277 COG4425 Predicted membrane pro 40.7 59 0.0013 27.6 4.5 37 100-136 375-413 (588)
278 PRK10279 hypothetical protein; 40.7 36 0.00078 27.2 3.3 20 121-140 34-53 (300)
279 TIGR03249 KdgD 5-dehydro-4-deo 39.9 1.9E+02 0.0041 23.0 9.9 125 49-212 27-153 (296)
280 cd07211 Pat_PNPLA8 Patatin-lik 39.6 62 0.0013 25.9 4.5 17 123-139 44-60 (308)
281 cd07225 Pat_PNPLA6_PNPLA7 Pata 38.2 42 0.00091 26.9 3.3 20 121-140 44-63 (306)
282 cd07198 Patatin Patatin-like p 38.2 43 0.00093 24.0 3.2 20 121-140 27-46 (172)
283 PF06792 UPF0261: Uncharacteri 37.6 1.4E+02 0.0031 25.0 6.2 103 40-142 6-117 (403)
284 cd07207 Pat_ExoU_VipD_like Exo 36.6 47 0.001 24.2 3.3 20 121-140 28-47 (194)
285 COG1448 TyrB Aspartate/tyrosin 36.4 68 0.0015 26.5 4.2 73 33-134 170-249 (396)
286 COG0331 FabD (acyl-carrier-pro 36.3 60 0.0013 26.1 3.9 22 118-139 83-104 (310)
287 cd07224 Pat_like Patatin-like 35.8 57 0.0012 24.9 3.6 21 121-141 30-50 (233)
288 cd07212 Pat_PNPLA9 Patatin-lik 35.3 34 0.00073 27.5 2.4 18 123-140 35-52 (312)
289 cd07227 Pat_Fungal_NTE1 Fungal 35.1 53 0.0011 25.8 3.4 20 121-140 39-58 (269)
290 COG3340 PepE Peptidase E [Amin 35.0 16 0.00034 27.4 0.5 37 33-69 31-70 (224)
291 COG2326 Uncharacterized conser 34.8 2.2E+02 0.0048 22.3 6.4 39 32-70 71-111 (270)
292 PRK00726 murG undecaprenyldiph 33.3 2.1E+02 0.0046 23.1 6.8 35 36-70 4-38 (357)
293 cd07210 Pat_hypo_W_succinogene 33.2 65 0.0014 24.3 3.5 20 121-140 29-48 (221)
294 COG1752 RssA Predicted esteras 32.8 57 0.0012 26.1 3.3 20 121-140 40-59 (306)
295 cd00951 KDGDH 5-dehydro-4-deox 31.6 2.6E+02 0.0057 22.1 9.1 76 123-211 72-147 (289)
296 PF03610 EIIA-man: PTS system 30.9 1.2E+02 0.0026 20.0 4.2 38 102-139 40-77 (116)
297 TIGR02873 spore_ylxY probable 30.9 22 0.00049 27.8 0.7 34 35-68 231-264 (268)
298 KOG0256 1-aminocyclopropane-1- 30.9 3.3E+02 0.0072 23.1 11.0 108 119-248 146-257 (471)
299 COG3946 VirJ Type IV secretory 30.5 3.2E+02 0.007 23.1 7.0 109 20-142 34-143 (456)
300 cd07228 Pat_NTE_like_bacteria 30.2 85 0.0018 22.5 3.6 20 121-140 29-48 (175)
301 cd07205 Pat_PNPLA6_PNPLA7_NTE1 30.0 90 0.002 22.3 3.8 20 121-140 29-48 (175)
302 KOG0781 Signal recognition par 29.7 60 0.0013 27.9 3.0 76 38-140 442-518 (587)
303 PRK03620 5-dehydro-4-deoxygluc 29.4 3E+02 0.0064 22.0 9.9 20 49-68 29-48 (303)
304 TIGR02764 spore_ybaN_pdaB poly 29.4 16 0.00035 26.7 -0.3 34 35-68 152-188 (191)
305 KOG1752 Glutaredoxin and relat 28.4 1.8E+02 0.0038 19.1 5.8 77 33-140 13-89 (104)
306 cd07209 Pat_hypo_Ecoli_Z1214_l 27.1 86 0.0019 23.5 3.3 21 121-141 27-47 (215)
307 PF09949 DUF2183: Uncharacteri 26.6 1.9E+02 0.0041 18.8 4.4 46 106-161 52-97 (100)
308 TIGR03708 poly_P_AMP_trns poly 26.5 3.3E+02 0.0071 23.8 6.8 39 32-70 296-336 (493)
309 PF01734 Patatin: Patatin-like 26.3 66 0.0014 22.9 2.6 20 121-140 28-47 (204)
310 cd07208 Pat_hypo_Ecoli_yjju_li 25.5 68 0.0015 24.9 2.6 19 123-141 30-48 (266)
311 PF02606 LpxK: Tetraacyldisacc 25.5 2.7E+02 0.0059 22.6 6.0 53 186-246 225-277 (326)
312 TIGR02884 spore_pdaA delta-lac 24.8 32 0.00069 26.0 0.6 34 35-68 187-221 (224)
313 PLN02606 palmitoyl-protein thi 24.4 3.8E+02 0.0083 21.6 6.8 39 187-227 25-64 (306)
314 TIGR02816 pfaB_fam PfaB family 23.8 81 0.0018 27.6 2.9 20 121-140 266-285 (538)
315 COG3007 Uncharacterized paraqu 23.4 1.9E+02 0.0041 23.2 4.4 41 101-141 23-63 (398)
316 cd01819 Patatin_and_cPLA2 Pata 23.3 1.6E+02 0.0035 20.7 3.9 18 121-138 29-46 (155)
317 PLN02752 [acyl-carrier protein 23.3 61 0.0013 26.4 2.0 18 122-139 126-143 (343)
318 cd00006 PTS_IIA_man PTS_IIA, P 23.0 2.4E+02 0.0052 18.8 4.7 73 36-137 3-75 (122)
319 cd07217 Pat17_PNPLA8_PNPLA9_li 23.0 75 0.0016 26.0 2.5 18 123-140 44-61 (344)
320 PF09757 Arb2: Arb2 domain; I 22.7 28 0.00062 25.2 0.0 39 32-70 97-148 (178)
321 cd07213 Pat17_PNPLA8_PNPLA9_li 22.5 79 0.0017 25.0 2.4 18 123-140 37-54 (288)
322 PF11713 Peptidase_C80: Peptid 21.4 1.1E+02 0.0023 21.8 2.7 15 118-132 102-116 (157)
323 PRK04148 hypothetical protein; 21.0 2.6E+02 0.0056 19.3 4.4 33 106-139 5-37 (134)
324 cd07230 Pat_TGL4-5_like Triacy 20.9 1.2E+02 0.0026 25.7 3.2 31 109-141 92-122 (421)
325 COG3933 Transcriptional antite 20.1 4.8E+02 0.01 22.4 6.4 76 32-137 107-182 (470)
326 TIGR03708 poly_P_AMP_trns poly 20.1 1.8E+02 0.0039 25.3 4.2 40 32-71 37-78 (493)
No 1
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.97 E-value=5.9e-30 Score=192.27 Aligned_cols=207 Identities=39% Similarity=0.730 Sum_probs=146.3
Q ss_pred EEeCCCCCCceEEEEEccCCCCccchHHHhh-cCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHH
Q 025145 25 HVVRPKGKHQATIVWLHGLGDNGSSWSQLLE-SLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLD 103 (257)
Q Consensus 25 ~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~-~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 103 (257)
.+..+.++..++|||+||+|++...+..+.. .+......++.++.|........|....+||+..........+...+.
T Consensus 5 ~i~~~~~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~ 84 (216)
T PF02230_consen 5 RIIEPKGKAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIE 84 (216)
T ss_dssp EEE--SST-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHH
T ss_pred EEeCCCCCCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHH
Confidence 4567788889999999999999977777666 445578999999988765555567767799988665554445566777
Q ss_pred HHHHHHHHHhcc----CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccc
Q 025145 104 ASAAHIANLLST----EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGS 179 (257)
Q Consensus 104 ~~~~~~~~~~~~----~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 179 (257)
+.+..+.++++. .....+|+|+|+|+||.+++.++.+ ++..++++++++|+++..........
T Consensus 85 ~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~-----------~p~~~~gvv~lsG~~~~~~~~~~~~~-- 151 (216)
T PF02230_consen 85 ESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALR-----------YPEPLAGVVALSGYLPPESELEDRPE-- 151 (216)
T ss_dssp HHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHC-----------TSSTSSEEEEES---TTGCCCHCCHC--
T ss_pred HHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHH-----------cCcCcCEEEEeecccccccccccccc--
Confidence 777766666653 3344699999999999999999995 48899999999999987654433221
Q ss_pred hHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025145 180 HEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 180 ~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
....+|++++||+.|+++|.+.++...+.+++.+. +++++.|+|.||.+..+.++.+.+||.+.+
T Consensus 152 -----~~~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~-~v~~~~~~g~gH~i~~~~~~~~~~~l~~~~ 216 (216)
T PF02230_consen 152 -----ALAKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGA-NVEFHEYPGGGHEISPEELRDLREFLEKHI 216 (216)
T ss_dssp -----CCCTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT--GEEEEEETT-SSS--HHHHHHHHHHHHHH-
T ss_pred -----ccCCCcEEEEecCCCCcccHHHHHHHHHHHHhcCC-CEEEEEcCCCCCCCCHHHHHHHHHHHhhhC
Confidence 12278999999999999999999999999999988 899999999999999999999999998763
No 2
>PRK11460 putative hydrolase; Provisional
Probab=99.95 E-value=5.9e-26 Score=171.85 Aligned_cols=195 Identities=20% Similarity=0.234 Sum_probs=142.8
Q ss_pred CCCCCCceEEEEEccCCCCccchHHHhhcCCCC--ceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025145 28 RPKGKHQATIVWLHGLGDNGSSWSQLLESLPLP--NIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 28 ~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~--g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
++.+++.++||++||+|++...|..+++.|... .+.++.++.|.. ........||+...... .....++.+.
T Consensus 10 ~~~~~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~----~~~~~g~~W~~~~~~~~--~~~~~~~~~~ 83 (232)
T PRK11460 10 SPDKPAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEP----SGNGAGRQWFSVQGITE--DNRQARVAAI 83 (232)
T ss_pred CCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCC----cCCCCCcccccCCCCCc--cchHHHHHHH
Confidence 455667889999999999999999999888643 357777775532 11122357887643221 1222233333
Q ss_pred HHHHHH----HhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccch
Q 025145 106 AAHIAN----LLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSH 180 (257)
Q Consensus 106 ~~~~~~----~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 180 (257)
...+.+ +..+. ...++|+|+|||+||.+++.++.+. +..+++++++++.++....
T Consensus 84 ~~~l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~-----------~~~~~~vv~~sg~~~~~~~--------- 143 (232)
T PRK11460 84 MPTFIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAE-----------PGLAGRVIAFSGRYASLPE--------- 143 (232)
T ss_pred HHHHHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhC-----------CCcceEEEEeccccccccc---------
Confidence 333333 22222 2335899999999999999998753 6678888888887642110
Q ss_pred HHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcCc
Q 025145 181 EAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLGL 252 (257)
Q Consensus 181 ~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 252 (257)
.....+|++++||++|+++|++.++++.+.+++.+. +++++++++++|.+..+..+.+.+||.+.+..
T Consensus 144 ---~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~-~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l~~ 211 (232)
T PRK11460 144 ---TAPTATTIHLIHGGEDPVIDVAHAVAAQEALISLGG-DVTLDIVEDLGHAIDPRLMQFALDRLRYTVPK 211 (232)
T ss_pred ---cccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCC-CeEEEEECCCCCCCCHHHHHHHHHHHHHHcch
Confidence 113478999999999999999999999999998886 78999999999999999999999999998753
No 3
>PHA02857 monoglyceride lipase; Provisional
Probab=99.94 E-value=4.2e-25 Score=172.59 Aligned_cols=191 Identities=16% Similarity=0.168 Sum_probs=133.1
Q ss_pred eCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHH
Q 025145 27 VRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASA 106 (257)
Q Consensus 27 ~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 106 (257)
+.|...++++|+++||++++...|..+++.|+..||.|+++|+||||.+..... ....+.+.+
T Consensus 18 ~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~-----------------~~~~~~~~~ 80 (276)
T PHA02857 18 WKPITYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKM-----------------MIDDFGVYV 80 (276)
T ss_pred ccCCCCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccC-----------------CcCCHHHHH
Confidence 355456678888889999999999999999988899999999999876532110 011222223
Q ss_pred HHHHHHh---ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh------------
Q 025145 107 AHIANLL---STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN------------ 171 (257)
Q Consensus 107 ~~~~~~~---~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------------ 171 (257)
.++.+.+ .......+++|+||||||.+++.++.+. |+.++++|++++.......
T Consensus 81 ~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~-----------p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~ 149 (276)
T PHA02857 81 RDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKN-----------PNLFTAMILMSPLVNAEAVPRLNLLAAKLMG 149 (276)
T ss_pred HHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhC-----------ccccceEEEeccccccccccHHHHHHHHHHH
Confidence 3333333 2222234899999999999999999853 7789999999875321100
Q ss_pred --hh---------hcc-----------cc---------------------chHHHhhhcCCCEEEEccCCCCcccchhhH
Q 025145 172 --LR---------NKI-----------EG---------------------SHEAARRAASLPILLTHGLCDDVVPYKYGE 208 (257)
Q Consensus 172 --~~---------~~~-----------~~---------------------~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~ 208 (257)
.. ... .. ........+++|+++++|++|.++|++.+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~ 229 (276)
T PHA02857 150 IFYPNKIVGKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAY 229 (276)
T ss_pred HhCCCCccCCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHH
Confidence 00 000 00 001123457899999999999999999999
Q ss_pred HHHHHhhhcCceeeEEEEecCCCCccCHH-------HHHHHHHHHHHh
Q 025145 209 KSANCLSISGFRHLTFKSFEGLGHYTVPK-------EMDEVCNWLTAR 249 (257)
Q Consensus 209 ~~~~~l~~~~~~~~~~~~~~g~~H~~~~~-------~~~~~~~~l~~~ 249 (257)
.+.+.+.. ++++++++++||.+..| ..+++.+||.+.
T Consensus 230 ~l~~~~~~----~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 230 YFMQHANC----NREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred HHHHHccC----CceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 99888753 46899999999988732 457788888774
No 4
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.93 E-value=3e-25 Score=165.94 Aligned_cols=188 Identities=18% Similarity=0.169 Sum_probs=136.9
Q ss_pred CCCceEEEEEccCCCCc-cchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025145 31 GKHQATIVWLHGLGDNG-SSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
.+++..|+++||++++. ..|..++..|+..||.|++.|++|||.+.... ....+++..++++
T Consensus 51 ~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~-----------------~yi~~~d~~v~D~ 113 (313)
T KOG1455|consen 51 TEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLH-----------------AYVPSFDLVVDDV 113 (313)
T ss_pred CCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCc-----------------ccCCcHHHHHHHH
Confidence 47888999999999887 56888999999999999999999987655221 1133334444444
Q ss_pred HHHhc-----cCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc---------------
Q 025145 110 ANLLS-----TEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS--------------- 169 (257)
Q Consensus 110 ~~~~~-----~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------------- 169 (257)
..+++ .+....+.+|+||||||.+++.++.+. |..+.++|+++|.....
T Consensus 114 ~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~-----------p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~ 182 (313)
T KOG1455|consen 114 ISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKD-----------PNFWDGAILVAPMCKISEDTKPHPPVISILTL 182 (313)
T ss_pred HHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhC-----------CcccccceeeecccccCCccCCCcHHHHHHHH
Confidence 44333 233445999999999999999999954 77888888777632111
Q ss_pred --------hhhhhc-----------------------------------cc--cchHHHhhhcCCCEEEEccCCCCcccc
Q 025145 170 --------RNLRNK-----------------------------------IE--GSHEAARRAASLPILLTHGLCDDVVPY 204 (257)
Q Consensus 170 --------~~~~~~-----------------------------------~~--~~~~~~~~~~~~P~l~~~G~~D~~v~~ 204 (257)
...... ++ ..-+.+...+++|++++||++|.++.+
T Consensus 183 l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VTDp 262 (313)
T KOG1455|consen 183 LSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVTDP 262 (313)
T ss_pred HHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCcccCc
Confidence 000000 00 001124456789999999999999999
Q ss_pred hhhHHHHHHhhhcCceeeEEEEecCCCCccCH--------HHHHHHHHHHHHh
Q 025145 205 KYGEKSANCLSISGFRHLTFKSFEGLGHYTVP--------KEMDEVCNWLTAR 249 (257)
Q Consensus 205 ~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~--------~~~~~~~~~l~~~ 249 (257)
+.++.|++..... +.++++|||+-|.+.. ..+.+|++||.+.
T Consensus 263 ~~Sk~Lye~A~S~---DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 263 KVSKELYEKASSS---DKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred HHHHHHHHhccCC---CCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 9999999999876 7899999999998762 2467888898764
No 5
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.93 E-value=7.7e-25 Score=176.32 Aligned_cols=191 Identities=18% Similarity=0.160 Sum_probs=130.7
Q ss_pred CCCCceEEEEEccCCCCccc-hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHH
Q 025145 30 KGKHQATIVWLHGLGDNGSS-WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAH 108 (257)
Q Consensus 30 ~~~~~~~vi~~HG~~~~~~~-~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 108 (257)
.++++++|||+||++++... |..+++.|++.||+|+++|+||||.+.... ....++.+.+++
T Consensus 83 ~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~-----------------~~~~~~~~~~~d 145 (349)
T PLN02385 83 NSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLH-----------------GYIPSFDDLVDD 145 (349)
T ss_pred CCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCC-----------------CCcCCHHHHHHH
Confidence 34577899999999988765 578888998789999999999887543210 001123333444
Q ss_pred HHHHhccC-----CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch-------------
Q 025145 109 IANLLSTE-----PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR------------- 170 (257)
Q Consensus 109 ~~~~~~~~-----~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------------- 170 (257)
+.++++.. ....+++|+||||||.+++.++.+. |..+.++|++++......
T Consensus 146 v~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~-----------p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~ 214 (349)
T PLN02385 146 VIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQ-----------PNAWDGAILVAPMCKIADDVVPPPLVLQILI 214 (349)
T ss_pred HHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhC-----------cchhhheeEecccccccccccCchHHHHHHH
Confidence 44333221 1234899999999999999999854 778888888876421000
Q ss_pred ---------------hhhhc-cc----------------c---------------chHHHhhhcCCCEEEEccCCCCccc
Q 025145 171 ---------------NLRNK-IE----------------G---------------SHEAARRAASLPILLTHGLCDDVVP 203 (257)
Q Consensus 171 ---------------~~~~~-~~----------------~---------------~~~~~~~~~~~P~l~~~G~~D~~v~ 203 (257)
.+... .. . ........+++|+|+++|++|.++|
T Consensus 215 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~ 294 (349)
T PLN02385 215 LLANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTD 294 (349)
T ss_pred HHHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccC
Confidence 00000 00 0 0001223578999999999999999
Q ss_pred chhhHHHHHHhhhcCceeeEEEEecCCCCccCHH--------HHHHHHHHHHHhcC
Q 025145 204 YKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPK--------EMDEVCNWLTARLG 251 (257)
Q Consensus 204 ~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~--------~~~~~~~~l~~~l~ 251 (257)
++.++.+++.+... +.+++++++++|.+..+ ..+.+.+||.+.+.
T Consensus 295 ~~~~~~l~~~~~~~---~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 295 PSVSKFLYEKASSS---DKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred hHHHHHHHHHcCCC---CceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 99999999988643 56899999999988622 45678889887764
No 6
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.93 E-value=1.8e-24 Score=153.66 Aligned_cols=197 Identities=54% Similarity=0.973 Sum_probs=171.9
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025145 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
...+|||+||.|.+...|..+.+.+...+...++|..|.++.....|-....||+.-..+.+...+.+.+...++.+..+
T Consensus 2 h~atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 2 HTATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANL 81 (206)
T ss_pred ceEEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHH
Confidence 35689999999999999999999999999999999999999999999999999999877777777888888888888888
Q ss_pred hccCC----CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCC-chhhhhccccchHHHhhhc
Q 025145 113 LSTEP----ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPG-SRNLRNKIEGSHEAARRAA 187 (257)
Q Consensus 113 ~~~~~----~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 187 (257)
++++. ..++|++.|+||||.+++..+. .++..+.+++..+++.+. ...+....... .
T Consensus 82 i~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~-----------~~~~~l~G~~~~s~~~p~~~~~~~~~~~~~-------~ 143 (206)
T KOG2112|consen 82 IDNEPANGIPSNRIGIGGFSQGGALALYSAL-----------TYPKALGGIFALSGFLPRASIGLPGWLPGV-------N 143 (206)
T ss_pred HHHHHHcCCCccceeEcccCchHHHHHHHHh-----------ccccccceeeccccccccchhhccCCcccc-------C
Confidence 87653 3358999999999999999999 458889999999999883 33333332211 1
Q ss_pred CCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHH
Q 025145 188 SLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTA 248 (257)
Q Consensus 188 ~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~ 248 (257)
.+|++..||+.|++||....+...+.++..+. .++++.|+|.+|...++.++++..|+.+
T Consensus 144 ~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~-~~~f~~y~g~~h~~~~~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 144 YTPILLCHGTADPLVPFRFGEKSAQFLKSLGV-RVTFKPYPGLGHSTSPQELDDLKSWIKT 203 (206)
T ss_pred cchhheecccCCceeehHHHHHHHHHHHHcCC-ceeeeecCCccccccHHHHHHHHHHHHH
Confidence 89999999999999999999999999999998 4999999999999999999999999987
No 7
>PRK10566 esterase; Provisional
Probab=99.93 E-value=2.7e-24 Score=165.52 Aligned_cols=198 Identities=23% Similarity=0.316 Sum_probs=129.4
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCC--CcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025145 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGG--FPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g--~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
++.|+||++||++++...|..+++.|++.||.|+++|+|++|.+.... .....|+.. ....+.+....+
T Consensus 25 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~ 95 (249)
T PRK10566 25 TPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQI---------LLQNMQEFPTLR 95 (249)
T ss_pred CCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHH---------HHHHHHHHHHHH
Confidence 356899999999999988999999998889999999999876532110 000111100 001122222222
Q ss_pred HHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEe--ccCCCCc-hhh-hh----------
Q 025145 110 ANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGL--SGWLPGS-RNL-RN---------- 174 (257)
Q Consensus 110 ~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~-~~~-~~---------- 174 (257)
..+.+.. ...++++++|||+||.+++.++.+. +. +.+.+.+ ++++... ... ..
T Consensus 96 ~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~-----------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (249)
T PRK10566 96 AAIREEGWLLDDRLAVGGASMGGMTALGIMARH-----------PW-VKCVASLMGSGYFTSLARTLFPPLIPETAAQQA 163 (249)
T ss_pred HHHHhcCCcCccceeEEeecccHHHHHHHHHhC-----------CC-eeEEEEeeCcHHHHHHHHHhcccccccccccHH
Confidence 2222222 2345999999999999999998753 33 4433322 2221100 000 00
Q ss_pred --------ccccchHHHhhhc-CCCEEEEccCCCCcccchhhHHHHHHhhhcCce-eeEEEEecCCCCccCHHHHHHHHH
Q 025145 175 --------KIEGSHEAARRAA-SLPILLTHGLCDDVVPYKYGEKSANCLSISGFR-HLTFKSFEGLGHYTVPKEMDEVCN 244 (257)
Q Consensus 175 --------~~~~~~~~~~~~~-~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~-~~~~~~~~g~~H~~~~~~~~~~~~ 244 (257)
............+ ++|+|++||++|.++|++.++.+.+.++.++.+ ++++..+++.+|.+..+..+.+.+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~ 243 (249)
T PRK10566 164 EFNNIVAPLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRITPEALDAGVA 243 (249)
T ss_pred HHHHHHHHHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccCHHHHHHHHH
Confidence 0000001112233 689999999999999999999999999987752 478899999999999999999999
Q ss_pred HHHHhc
Q 025145 245 WLTARL 250 (257)
Q Consensus 245 ~l~~~l 250 (257)
||++.+
T Consensus 244 fl~~~~ 249 (249)
T PRK10566 244 FFRQHL 249 (249)
T ss_pred HHHhhC
Confidence 998754
No 8
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.93 E-value=2.2e-24 Score=168.49 Aligned_cols=185 Identities=16% Similarity=0.112 Sum_probs=128.7
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025145 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
+..++|||+||++++...|..+++.|. .+|+|+++|+||+|.+..+. ...++.+.++++.+
T Consensus 23 ~~~~plvllHG~~~~~~~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~~------------------~~~~~~~~~~~~~~ 83 (276)
T TIGR02240 23 EGLTPLLIFNGIGANLELVFPFIEALD-PDLEVIAFDVPGVGGSSTPR------------------HPYRFPGLAKLAAR 83 (276)
T ss_pred CCCCcEEEEeCCCcchHHHHHHHHHhc-cCceEEEECCCCCCCCCCCC------------------CcCcHHHHHHHHHH
Confidence 344689999999999999999999997 57999999999887543211 11234555566666
Q ss_pred HhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc------h---------hh----
Q 025145 112 LLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS------R---------NL---- 172 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~---------~~---- 172 (257)
+++..... +++|+||||||.+++.++.+. |+++++++++++..... . ..
T Consensus 84 ~i~~l~~~-~~~LvG~S~GG~va~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (276)
T TIGR02240 84 MLDYLDYG-QVNAIGVSWGGALAQQFAHDY-----------PERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPS 151 (276)
T ss_pred HHHHhCcC-ceEEEEECHHHHHHHHHHHHC-----------HHHhhheEEeccCCccccCCCchhHHHHhcCchhhhccc
Confidence 66654333 899999999999999999964 66777777665432100 0 00
Q ss_pred ------h---------------h---ccc----------------cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHH
Q 025145 173 ------R---------------N---KIE----------------GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSAN 212 (257)
Q Consensus 173 ------~---------------~---~~~----------------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~ 212 (257)
. . ... .........+++|+++++|++|.++|++.++++.+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~ 231 (276)
T TIGR02240 152 HGIHIAPDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAW 231 (276)
T ss_pred cccchhhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHH
Confidence 0 0 000 00011235678999999999999999999999998
Q ss_pred HhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcCcC
Q 025145 213 CLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLGLE 253 (257)
Q Consensus 213 ~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~~ 253 (257)
.++ +.+++++++ ||..+.+..+.+.+.+.+++...
T Consensus 232 ~~~-----~~~~~~i~~-gH~~~~e~p~~~~~~i~~fl~~~ 266 (276)
T TIGR02240 232 RIP-----NAELHIIDD-GHLFLITRAEAVAPIIMKFLAEE 266 (276)
T ss_pred hCC-----CCEEEEEcC-CCchhhccHHHHHHHHHHHHHHh
Confidence 887 567888886 99988666666666555555443
No 9
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.93 E-value=8.2e-24 Score=169.31 Aligned_cols=195 Identities=16% Similarity=0.110 Sum_probs=132.3
Q ss_pred CCceEEEEEccCCCCcc-chHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHH
Q 025145 32 KHQATIVWLHGLGDNGS-SWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIA 110 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (257)
+++++|||+||++.+.. .|..++..|+..||+|+++|+||||.+.... . .......+.+++..+.
T Consensus 57 ~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~----~----------~~~~~~~~~~D~~~~i 122 (330)
T PLN02298 57 PPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLR----A----------YVPNVDLVVEDCLSFF 122 (330)
T ss_pred CCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCcc----c----------cCCCHHHHHHHHHHHH
Confidence 56789999999987653 4666777888789999999999987653110 0 0111233333344444
Q ss_pred HHhccC--CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch-------------hhhh-
Q 025145 111 NLLSTE--PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR-------------NLRN- 174 (257)
Q Consensus 111 ~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------------~~~~- 174 (257)
+.+... ....+++|+||||||.+++.++.+ +|.+++++|+++++..... ....
T Consensus 123 ~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~-----------~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (330)
T PLN02298 123 NSVKQREEFQGLPRFLYGESMGGAICLLIHLA-----------NPEGFDGAVLVAPMCKISDKIRPPWPIPQILTFVARF 191 (330)
T ss_pred HHHHhcccCCCCCEEEEEecchhHHHHHHHhc-----------CcccceeEEEecccccCCcccCCchHHHHHHHHHHHH
Confidence 444322 222479999999999999999884 3778999998877532110 0000
Q ss_pred -----------cc--------------------ccc---------------hHHHhhhcCCCEEEEccCCCCcccchhhH
Q 025145 175 -----------KI--------------------EGS---------------HEAARRAASLPILLTHGLCDDVVPYKYGE 208 (257)
Q Consensus 175 -----------~~--------------------~~~---------------~~~~~~~~~~P~l~~~G~~D~~v~~~~~~ 208 (257)
.+ ... .......+++|+|++||++|.++|++.++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~ivp~~~~~ 271 (330)
T PLN02298 192 LPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHGSADVVTDPDVSR 271 (330)
T ss_pred CCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEecCCCCCCCHHHHH
Confidence 00 000 01123457899999999999999999999
Q ss_pred HHHHHhhhcCceeeEEEEecCCCCccCH--------HHHHHHHHHHHHhcCcCC
Q 025145 209 KSANCLSISGFRHLTFKSFEGLGHYTVP--------KEMDEVCNWLTARLGLEG 254 (257)
Q Consensus 209 ~~~~~l~~~~~~~~~~~~~~g~~H~~~~--------~~~~~~~~~l~~~l~~~~ 254 (257)
.+++.++.. +.+++++++++|.+.. +..+.+.+||.+.+....
T Consensus 272 ~l~~~i~~~---~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~~~ 322 (330)
T PLN02298 272 ALYEEAKSE---DKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTGKA 322 (330)
T ss_pred HHHHHhccC---CceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccCCC
Confidence 999988643 5689999999999752 235678899998876543
No 10
>PRK13604 luxD acyl transferase; Provisional
Probab=99.93 E-value=2.4e-24 Score=165.35 Aligned_cols=192 Identities=14% Similarity=0.091 Sum_probs=134.2
Q ss_pred cccccCCCCCceEEeCC--CCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCC-CcccCCCCcccccccCC
Q 025145 13 RAARRTFEFGRTHVVRP--KGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTR-PVAILGGFPCTAWFDVG 89 (257)
Q Consensus 13 ~~~~~~~~~~~~~~~~~--~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~-g~~~~~g~~~~~w~~~~ 89 (257)
.....+..+-.++..+. ..++.++||+.||+++....+..+++.|+++||.|+.+|.+++ |.+ +|. +..
T Consensus 14 ~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS--~G~-----~~~- 85 (307)
T PRK13604 14 ICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLS--SGT-----IDE- 85 (307)
T ss_pred EEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCC--CCc-----ccc-
Confidence 34445666666777665 3456789999999999887799999999999999999998876 644 221 100
Q ss_pred CCCCCCCCchhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc
Q 025145 90 ELSDDGPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS 169 (257)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 169 (257)
. .... ...++..+.++++.... .+|+|+||||||.+++..|. ..+++++|+.+|+....
T Consensus 86 -~--t~s~----g~~Dl~aaid~lk~~~~-~~I~LiG~SmGgava~~~A~-------------~~~v~~lI~~sp~~~l~ 144 (307)
T PRK13604 86 -F--TMSI----GKNSLLTVVDWLNTRGI-NNLGLIAASLSARIAYEVIN-------------EIDLSFLITAVGVVNLR 144 (307)
T ss_pred -C--cccc----cHHHHHHHHHHHHhcCC-CceEEEEECHHHHHHHHHhc-------------CCCCCEEEEcCCcccHH
Confidence 0 0001 13344444455544433 48999999999999877765 33588899999876533
Q ss_pred hhhhhccc---------------------------------------cchHHHhhhcCCCEEEEccCCCCcccchhhHHH
Q 025145 170 RNLRNKIE---------------------------------------GSHEAARRAASLPILLTHGLCDDVVPYKYGEKS 210 (257)
Q Consensus 170 ~~~~~~~~---------------------------------------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~ 210 (257)
+.+..... ..+.......+.|+|++||++|.+||++.++.+
T Consensus 145 d~l~~~~~~~~~~~p~~~lp~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l 224 (307)
T PRK13604 145 DTLERALGYDYLSLPIDELPEDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDL 224 (307)
T ss_pred HHHHHhhhcccccCcccccccccccccccccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHH
Confidence 22110000 001122445679999999999999999999999
Q ss_pred HHHhhhcCceeeEEEEecCCCCccCH
Q 025145 211 ANCLSISGFRHLTFKSFEGLGHYTVP 236 (257)
Q Consensus 211 ~~~l~~~~~~~~~~~~~~g~~H~~~~ 236 (257)
++.++.. +++++++||++|.+.+
T Consensus 225 ~e~~~s~---~kkl~~i~Ga~H~l~~ 247 (307)
T PRK13604 225 LDSIRSE---QCKLYSLIGSSHDLGE 247 (307)
T ss_pred HHHhccC---CcEEEEeCCCccccCc
Confidence 9998754 6799999999999773
No 11
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.92 E-value=5.8e-24 Score=167.61 Aligned_cols=196 Identities=19% Similarity=0.200 Sum_probs=136.5
Q ss_pred eCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHH
Q 025145 27 VRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASA 106 (257)
Q Consensus 27 ~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 106 (257)
+...+++.++|||+||++++...|..++..|+ ..++|+++|+||+|.+..... . ........++.+.+
T Consensus 22 y~~~G~~~~~vlllHG~~~~~~~w~~~~~~L~-~~~~vi~~DlpG~G~S~~~~~--------~---~~~~~~~~~~~~~a 89 (294)
T PLN02824 22 YQRAGTSGPALVLVHGFGGNADHWRKNTPVLA-KSHRVYAIDLLGYGYSDKPNP--------R---SAPPNSFYTFETWG 89 (294)
T ss_pred EEEcCCCCCeEEEECCCCCChhHHHHHHHHHH-hCCeEEEEcCCCCCCCCCCcc--------c---cccccccCCHHHHH
Confidence 33344345799999999999999999999997 457999999998875532210 0 00011234567777
Q ss_pred HHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc---------hh----hh
Q 025145 107 AHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS---------RN----LR 173 (257)
Q Consensus 107 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---------~~----~~ 173 (257)
+++.+++++.... +++|+||||||.+++.++.+. |++++++|++++..... .. +.
T Consensus 90 ~~l~~~l~~l~~~-~~~lvGhS~Gg~va~~~a~~~-----------p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~ 157 (294)
T PLN02824 90 EQLNDFCSDVVGD-PAFVICNSVGGVVGLQAAVDA-----------PELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQ 157 (294)
T ss_pred HHHHHHHHHhcCC-CeEEEEeCHHHHHHHHHHHhC-----------hhheeEEEEECCCcccccccccchhhhHHHHHHH
Confidence 7887877766544 999999999999999999954 88899999887532100 00 00
Q ss_pred -----------------------hc----ccc-----------------------------------chHHHhhhcCCCE
Q 025145 174 -----------------------NK----IEG-----------------------------------SHEAARRAASLPI 191 (257)
Q Consensus 174 -----------------------~~----~~~-----------------------------------~~~~~~~~~~~P~ 191 (257)
.. ... ........+++|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 237 (294)
T PLN02824 158 NLLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPV 237 (294)
T ss_pred HHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCe
Confidence 00 000 0011234568999
Q ss_pred EEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025145 192 LLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 192 l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
++++|++|..+|.+.++.+.+..+ +.++++++++||.++.+..+.+.+-|.+++.
T Consensus 238 lvi~G~~D~~~~~~~~~~~~~~~~-----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (294)
T PLN02824 238 LIAWGEKDPWEPVELGRAYANFDA-----VEDFIVLPGVGHCPQDEAPELVNPLIESFVA 292 (294)
T ss_pred EEEEecCCCCCChHHHHHHHhcCC-----ccceEEeCCCCCChhhhCHHHHHHHHHHHHh
Confidence 999999999999988877666554 5689999999999987776666666665553
No 12
>PRK10749 lysophospholipase L2; Provisional
Probab=99.92 E-value=1.4e-23 Score=167.57 Aligned_cols=194 Identities=12% Similarity=0.018 Sum_probs=131.5
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025145 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
.++++||++||++++...|..++..+...||.|+++|+||||.+...-. ........++.+.++++..
T Consensus 52 ~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~------------~~~~~~~~~~~~~~~d~~~ 119 (330)
T PRK10749 52 HHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLD------------DPHRGHVERFNDYVDDLAA 119 (330)
T ss_pred CCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCC------------CCCcCccccHHHHHHHHHH
Confidence 4567999999999999899999988878999999999999876532100 0000011234444445444
Q ss_pred Hhcc---CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc----hh--------h----
Q 025145 112 LLST---EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS----RN--------L---- 172 (257)
Q Consensus 112 ~~~~---~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~--------~---- 172 (257)
+++. .....+++++||||||.+++.++.+. ++.++++|++++..... .. .
T Consensus 120 ~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~-----------p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~ 188 (330)
T PRK10749 120 FWQQEIQPGPYRKRYALAHSMGGAILTLFLQRH-----------PGVFDAIALCAPMFGIVLPLPSWMARRILNWAEGHP 188 (330)
T ss_pred HHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhC-----------CCCcceEEEECchhccCCCCCcHHHHHHHHHHHHhc
Confidence 4433 22234899999999999999999854 77888888887643110 00 0
Q ss_pred --------------------------h-------hccccch----------------------HHHhhhcCCCEEEEccC
Q 025145 173 --------------------------R-------NKIEGSH----------------------EAARRAASLPILLTHGL 197 (257)
Q Consensus 173 --------------------------~-------~~~~~~~----------------------~~~~~~~~~P~l~~~G~ 197 (257)
. +.+...+ ......+++|+|+++|+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~ 268 (330)
T PRK10749 189 RIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLLLQAE 268 (330)
T ss_pred CCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEEEEeC
Confidence 0 0000000 01124568999999999
Q ss_pred CCCcccchhhHHHHHHhhhcCc--eeeEEEEecCCCCccCHH-------HHHHHHHHHHH
Q 025145 198 CDDVVPYKYGEKSANCLSISGF--RHLTFKSFEGLGHYTVPK-------EMDEVCNWLTA 248 (257)
Q Consensus 198 ~D~~v~~~~~~~~~~~l~~~~~--~~~~~~~~~g~~H~~~~~-------~~~~~~~~l~~ 248 (257)
+|.+++++.++.+++.++..+. +++++++++|++|.+..| .++.+.+||.+
T Consensus 269 ~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~ 328 (330)
T PRK10749 269 EERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNR 328 (330)
T ss_pred CCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhh
Confidence 9999999999999999876542 256899999999987632 34566777654
No 13
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.92 E-value=1e-23 Score=162.69 Aligned_cols=185 Identities=19% Similarity=0.200 Sum_probs=133.3
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025145 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
...|+|||+||++++...|..++..|. .+|+|+++|+||+|.+... .....++.+.++++.+
T Consensus 11 ~~~~~iv~lhG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~-----------------~~~~~~~~~~~~~~~~ 72 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSYWAPQLDVLT-QRFHVVTYDHRGTGRSPGE-----------------LPPGYSIAHMADDVLQ 72 (257)
T ss_pred CCCCEEEEEcCCCcchhHHHHHHHHHH-hccEEEEEcCCCCCCCCCC-----------------CcccCCHHHHHHHHHH
Confidence 456799999999999999999888886 6799999999987654311 1112345666677777
Q ss_pred HhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhh------------------
Q 025145 112 LLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLR------------------ 173 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~------------------ 173 (257)
+++..... +++++||||||.+++.++.+. ++.++++|+++++........
T Consensus 73 ~i~~~~~~-~~~l~G~S~Gg~~a~~~a~~~-----------~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (257)
T TIGR03611 73 LLDALNIE-RFHFVGHALGGLIGLQLALRY-----------PERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAY 140 (257)
T ss_pred HHHHhCCC-cEEEEEechhHHHHHHHHHHC-----------hHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchh
Confidence 77655433 899999999999999999854 667888887776432210000
Q ss_pred ---------------h-----------ccc-----------------cchHHHhhhcCCCEEEEccCCCCcccchhhHHH
Q 025145 174 ---------------N-----------KIE-----------------GSHEAARRAASLPILLTHGLCDDVVPYKYGEKS 210 (257)
Q Consensus 174 ---------------~-----------~~~-----------------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~ 210 (257)
. ... .........+++|+++++|++|.++|++.++.+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~ 220 (257)
T TIGR03611 141 VHAQALFLYPADWISENAARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRL 220 (257)
T ss_pred hhhhhhhhccccHhhccchhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHH
Confidence 0 000 000112345689999999999999999998888
Q ss_pred HHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025145 211 ANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 211 ~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
.+.++ +.+++.++++||.+..+..+.+.+.+.++++
T Consensus 221 ~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 221 AAALP-----NAQLKLLPYGGHASNVTDPETFNRALLDFLK 256 (257)
T ss_pred HHhcC-----CceEEEECCCCCCccccCHHHHHHHHHHHhc
Confidence 88876 5688999999999886666666666666553
No 14
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.92 E-value=1.7e-23 Score=163.40 Aligned_cols=194 Identities=18% Similarity=0.196 Sum_probs=138.2
Q ss_pred EeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCccc--CCCCcccccccCCCCCCCCCCchhhHH
Q 025145 26 VVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAI--LGGFPCTAWFDVGELSDDGPEDWEGLD 103 (257)
Q Consensus 26 ~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~--~~g~~~~~w~~~~~~~~~~~~~~~~~~ 103 (257)
.+.+..++..+||++||++++...|..++..|...||.|++.|+||||.+. ..| ....+.
T Consensus 26 ~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg------------------~~~~f~ 87 (298)
T COG2267 26 TWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRG------------------HVDSFA 87 (298)
T ss_pred eecCCCCCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcC------------------CchhHH
Confidence 344444555799999999999999999999999999999999999998764 222 122344
Q ss_pred HHHHHHHHHhccC---CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch----------
Q 025145 104 ASAAHIANLLSTE---PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR---------- 170 (257)
Q Consensus 104 ~~~~~~~~~~~~~---~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---------- 170 (257)
+...++..+++.. ....+++|+||||||.+++.++.+. +..+.++|+.+|.+....
T Consensus 88 ~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~-----------~~~i~~~vLssP~~~l~~~~~~~~~~~~ 156 (298)
T COG2267 88 DYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARY-----------PPRIDGLVLSSPALGLGGAILRLILARL 156 (298)
T ss_pred HHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhC-----------CccccEEEEECccccCChhHHHHHHHHH
Confidence 4455554444433 3446999999999999999999964 788999999888643330
Q ss_pred ---------------------hhhhccccch---------------------------------HHHhhhcCCCEEEEcc
Q 025145 171 ---------------------NLRNKIEGSH---------------------------------EAARRAASLPILLTHG 196 (257)
Q Consensus 171 ---------------------~~~~~~~~~~---------------------------------~~~~~~~~~P~l~~~G 196 (257)
.......+.. ......+++|+|+++|
T Consensus 157 ~~~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g 236 (298)
T COG2267 157 ALKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQG 236 (298)
T ss_pred hcccccccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEec
Confidence 0000000000 0013456899999999
Q ss_pred CCCCccc-chhhHHHHHHhhhcCceeeEEEEecCCCCccCH-------HHHHHHHHHHHHhcC
Q 025145 197 LCDDVVP-YKYGEKSANCLSISGFRHLTFKSFEGLGHYTVP-------KEMDEVCNWLTARLG 251 (257)
Q Consensus 197 ~~D~~v~-~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~-------~~~~~~~~~l~~~l~ 251 (257)
++|.+++ .+...++++.+... ++++++++|+.|.+.. +.++.+.+|+.+...
T Consensus 237 ~~D~vv~~~~~~~~~~~~~~~~---~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 237 GDDRVVDNVEGLARFFERAGSP---DKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred CCCccccCcHHHHHHHHhcCCC---CceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhcc
Confidence 9999999 56666666666554 6799999999998763 346777777776554
No 15
>COG0400 Predicted esterase [General function prediction only]
Probab=99.92 E-value=2.9e-23 Score=151.70 Aligned_cols=194 Identities=28% Similarity=0.382 Sum_probs=146.8
Q ss_pred CCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHH
Q 025145 28 RPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAA 107 (257)
Q Consensus 28 ~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 107 (257)
.+.++..|+||++||.|++..++.+..+.+. .++.++.+..+-. ..++.+...|++.+..+ ...........++
T Consensus 12 ~~~~p~~~~iilLHG~Ggde~~~~~~~~~~~-P~~~~is~rG~v~---~~g~~~~f~~~~~~~~d--~edl~~~~~~~~~ 85 (207)
T COG0400 12 KPGDPAAPLLILLHGLGGDELDLVPLPELIL-PNATLVSPRGPVA---ENGGPRFFRRYDEGSFD--QEDLDLETEKLAE 85 (207)
T ss_pred CCCCCCCcEEEEEecCCCChhhhhhhhhhcC-CCCeEEcCCCCcc---ccCcccceeecCCCccc--hhhHHHHHHHHHH
Confidence 3455667799999999999999888777765 6789998876532 33455555555544332 1111222333344
Q ss_pred HHHHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHHhhh
Q 025145 108 HIANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRA 186 (257)
Q Consensus 108 ~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (257)
.+.....+. .+.++++++|+|.|+.+++.+..+ ++..++++++++|.++..... ....
T Consensus 86 ~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~-----------~~~~~~~ail~~g~~~~~~~~----------~~~~ 144 (207)
T COG0400 86 FLEELAEEYGIDSSRIILIGFSQGANIALSLGLT-----------LPGLFAGAILFSGMLPLEPEL----------LPDL 144 (207)
T ss_pred HHHHHHHHhCCChhheEEEecChHHHHHHHHHHh-----------CchhhccchhcCCcCCCCCcc----------cccc
Confidence 444444433 334699999999999999999995 488999999999988876541 1235
Q ss_pred cCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025145 187 ASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 187 ~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
..+|++++||+.|++||...+.++.+.+++.|. +++...++ +||.+..+.++.+.+|+...+
T Consensus 145 ~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~-~v~~~~~~-~GH~i~~e~~~~~~~wl~~~~ 206 (207)
T COG0400 145 AGTPILLSHGTEDPVVPLALAEALAEYLTASGA-DVEVRWHE-GGHEIPPEELEAARSWLANTL 206 (207)
T ss_pred CCCeEEEeccCcCCccCHHHHHHHHHHHHHcCC-CEEEEEec-CCCcCCHHHHHHHHHHHHhcc
Confidence 689999999999999999999999999999988 89999999 699999999999999998754
No 16
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.92 E-value=1.5e-23 Score=169.66 Aligned_cols=197 Identities=17% Similarity=0.173 Sum_probs=136.8
Q ss_pred CCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025145 30 KGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 30 ~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
.++++++|||+||++++...|..+++.|++.||.|+++|+||||.+.... ........+.+++..+
T Consensus 132 ~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~--------------~~~~~~~~~~~Dl~~~ 197 (395)
T PLN02652 132 AGEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLH--------------GYVPSLDYVVEDTEAF 197 (395)
T ss_pred CCCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC--------------CCCcCHHHHHHHHHHH
Confidence 35667899999999999888999999998889999999999887543210 0011233334444555
Q ss_pred HHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh------------------
Q 025145 110 ANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN------------------ 171 (257)
Q Consensus 110 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------------------ 171 (257)
.+.+.......+++|+||||||.+++.++.+. ..++.+.++|+.++++.....
T Consensus 198 l~~l~~~~~~~~i~lvGhSmGG~ial~~a~~p---------~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~~~~~p~~ 268 (395)
T PLN02652 198 LEKIRSENPGVPCFLFGHSTGGAVVLKAASYP---------SIEDKLEGIVLTSPALRVKPAHPIVGAVAPIFSLVAPRF 268 (395)
T ss_pred HHHHHHhCCCCCEEEEEECHHHHHHHHHHhcc---------CcccccceEEEECcccccccchHHHHHHHHHHHHhCCCC
Confidence 55554433334899999999999999877531 123578888888876421100
Q ss_pred ------------------hhhcccc-------c--------------hHHHhhhcCCCEEEEccCCCCcccchhhHHHHH
Q 025145 172 ------------------LRNKIEG-------S--------------HEAARRAASLPILLTHGLCDDVVPYKYGEKSAN 212 (257)
Q Consensus 172 ------------------~~~~~~~-------~--------------~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~ 212 (257)
....+.. . .......+++|+|++||++|.++|++.++.+++
T Consensus 269 ~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~ 348 (395)
T PLN02652 269 QFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYN 348 (395)
T ss_pred cccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHH
Confidence 0000000 0 001224468999999999999999999999999
Q ss_pred HhhhcCceeeEEEEecCCCCccC-----HHHHHHHHHHHHHhcCc
Q 025145 213 CLSISGFRHLTFKSFEGLGHYTV-----PKEMDEVCNWLTARLGL 252 (257)
Q Consensus 213 ~l~~~~~~~~~~~~~~g~~H~~~-----~~~~~~~~~~l~~~l~~ 252 (257)
.+... +.+++++++++|.+. .+..+.+.+||.+.++.
T Consensus 349 ~~~~~---~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~~ 390 (395)
T PLN02652 349 EAASR---HKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLDL 390 (395)
T ss_pred hcCCC---CceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhhc
Confidence 87653 568899999999874 34578899999987764
No 17
>PLN02965 Probable pheophorbidase
Probab=99.92 E-value=1.6e-23 Score=161.69 Aligned_cols=184 Identities=14% Similarity=0.142 Sum_probs=133.4
Q ss_pred eEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhc
Q 025145 35 ATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLS 114 (257)
Q Consensus 35 ~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (257)
..|||+||++.+...|..++..|...+|+|+++|+||+|.+.... ....++.+.++++.++++
T Consensus 4 ~~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~-----------------~~~~~~~~~a~dl~~~l~ 66 (255)
T PLN02965 4 IHFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDS-----------------NTVSSSDQYNRPLFALLS 66 (255)
T ss_pred eEEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCc-----------------cccCCHHHHHHHHHHHHH
Confidence 469999999999999999999997689999999999887542111 112345666777777777
Q ss_pred cCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc-----hh------------------
Q 025145 115 TEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS-----RN------------------ 171 (257)
Q Consensus 115 ~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~------------------ 171 (257)
......+++|+||||||.+++.++.++ |+++++++++++..+.. ..
T Consensus 67 ~l~~~~~~~lvGhSmGG~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (255)
T PLN02965 67 DLPPDHKVILVGHSIGGGSVTEALCKF-----------TDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGE 135 (255)
T ss_pred hcCCCCCEEEEecCcchHHHHHHHHhC-----------chheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeecc
Confidence 654324899999999999999999964 77787777765431100 00
Q ss_pred --------------hh-hc-cccch-------------------------HHHhhhcCCCEEEEccCCCCcccchhhHHH
Q 025145 172 --------------LR-NK-IEGSH-------------------------EAARRAASLPILLTHGLCDDVVPYKYGEKS 210 (257)
Q Consensus 172 --------------~~-~~-~~~~~-------------------------~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~ 210 (257)
.. .. ..... ......+++|+++++|++|..+|++.++.+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~ 215 (255)
T PLN02965 136 GPDKPPTGIMMKPEFVRHYYYNQSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVM 215 (255)
T ss_pred CCCCCcchhhcCHHHHHHHHhcCCCHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHH
Confidence 00 00 00000 001124789999999999999999999999
Q ss_pred HHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025145 211 ANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 211 ~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
.+.++ +.++++++++||.++.+..+.+.+.|.++++
T Consensus 216 ~~~~~-----~a~~~~i~~~GH~~~~e~p~~v~~~l~~~~~ 251 (255)
T PLN02965 216 VENWP-----PAQTYVLEDSDHSAFFSVPTTLFQYLLQAVS 251 (255)
T ss_pred HHhCC-----cceEEEecCCCCchhhcCHHHHHHHHHHHHH
Confidence 99887 6689999999999997777777766666543
No 18
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.91 E-value=3.5e-23 Score=163.71 Aligned_cols=196 Identities=12% Similarity=0.058 Sum_probs=134.2
Q ss_pred EEeCCCCC-CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHH
Q 025145 25 HVVRPKGK-HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLD 103 (257)
Q Consensus 25 ~~~~~~~~-~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 103 (257)
+.+...+. ..++|||+||++++...|..+++.|.+.||+|+++|+||+|.+.... .....++.
T Consensus 36 i~y~~~G~~~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~----------------~~~~~~~~ 99 (302)
T PRK00870 36 MHYVDEGPADGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPT----------------RREDYTYA 99 (302)
T ss_pred EEEEecCCCCCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCC----------------CcccCCHH
Confidence 33444333 35799999999999999999999998679999999999887543211 00123456
Q ss_pred HHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh------------
Q 025145 104 ASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN------------ 171 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------------ 171 (257)
+.++++.+++++.... ++.|+||||||.+++.++.+. |+++.+++++++.++....
T Consensus 100 ~~a~~l~~~l~~l~~~-~v~lvGhS~Gg~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 167 (302)
T PRK00870 100 RHVEWMRSWFEQLDLT-DVTLVCQDWGGLIGLRLAAEH-----------PDRFARLVVANTGLPTGDGPMPDAFWAWRAF 167 (302)
T ss_pred HHHHHHHHHHHHcCCC-CEEEEEEChHHHHHHHHHHhC-----------hhheeEEEEeCCCCCCccccchHHHhhhhcc
Confidence 6777777777765444 899999999999999999854 7778888777643221000
Q ss_pred ------------------------hhhccc---------c----------------ch------HHHhhhcCCCEEEEcc
Q 025145 172 ------------------------LRNKIE---------G----------------SH------EAARRAASLPILLTHG 196 (257)
Q Consensus 172 ------------------------~~~~~~---------~----------------~~------~~~~~~~~~P~l~~~G 196 (257)
....+. . .. ......+++|+++++|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G 247 (302)
T PRK00870 168 SQYSPVLPVGRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFS 247 (302)
T ss_pred cccCchhhHHHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEec
Confidence 000000 0 00 0112456899999999
Q ss_pred CCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025145 197 LCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 197 ~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
++|.++|.+. +.+.+.++... .+++.+++++||.+..+..+.+.+.|.+++.
T Consensus 248 ~~D~~~~~~~-~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~ 299 (302)
T PRK00870 248 DSDPITGGGD-AILQKRIPGAA--GQPHPTIKGAGHFLQEDSGEELAEAVLEFIR 299 (302)
T ss_pred CCCCcccCch-HHHHhhccccc--ccceeeecCCCccchhhChHHHHHHHHHHHh
Confidence 9999999866 77887776321 2347899999999987766666666655553
No 19
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.91 E-value=2.7e-23 Score=160.59 Aligned_cols=181 Identities=23% Similarity=0.195 Sum_probs=126.5
Q ss_pred eCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHH
Q 025145 27 VRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASA 106 (257)
Q Consensus 27 ~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 106 (257)
|...++..|+|||+||++++...|..+...|. ..|+|+++|+||+|.+.... ..++.+.+
T Consensus 6 y~~~G~g~~~ivllHG~~~~~~~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~~-------------------~~~~~~~~ 65 (256)
T PRK10349 6 WQTKGQGNVHLVLLHGWGLNAEVWRCIDEELS-SHFTLHLVDLPGFGRSRGFG-------------------ALSLADMA 65 (256)
T ss_pred hhhcCCCCCeEEEECCCCCChhHHHHHHHHHh-cCCEEEEecCCCCCCCCCCC-------------------CCCHHHHH
Confidence 33344445579999999999999999999997 56999999999887542110 12334444
Q ss_pred HHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc-----------------
Q 025145 107 AHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS----------------- 169 (257)
Q Consensus 107 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----------------- 169 (257)
+++.++ .. +++.|+||||||.+++.++.+ +|.++.+++++++.....
T Consensus 66 ~~l~~~----~~-~~~~lvGhS~Gg~ia~~~a~~-----------~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~ 129 (256)
T PRK10349 66 EAVLQQ----AP-DKAIWLGWSLGGLVASQIALT-----------HPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQ 129 (256)
T ss_pred HHHHhc----CC-CCeEEEEECHHHHHHHHHHHh-----------ChHhhheEEEecCccceecCCCCCcccHHHHHHHH
Confidence 554432 22 489999999999999999985 488888888776521100
Q ss_pred --------hhhhhcc-----cc-----------------------------------chHHHhhhcCCCEEEEccCCCCc
Q 025145 170 --------RNLRNKI-----EG-----------------------------------SHEAARRAASLPILLTHGLCDDV 201 (257)
Q Consensus 170 --------~~~~~~~-----~~-----------------------------------~~~~~~~~~~~P~l~~~G~~D~~ 201 (257)
......+ .. ........+++|+++++|+.|.+
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~ 209 (256)
T PRK10349 130 QQLSDDFQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGL 209 (256)
T ss_pred HHHHhchHHHHHHHHHHHHccCchHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCcc
Confidence 0000000 00 00012345689999999999999
Q ss_pred ccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHH
Q 025145 202 VPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTA 248 (257)
Q Consensus 202 v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~ 248 (257)
+|.+.++.+.+.++ +.++++++++||.++.+..+.+.+-+.+
T Consensus 210 ~~~~~~~~~~~~i~-----~~~~~~i~~~gH~~~~e~p~~f~~~l~~ 251 (256)
T PRK10349 210 VPRKVVPMLDKLWP-----HSESYIFAKAAHAPFISHPAEFCHLLVA 251 (256)
T ss_pred CCHHHHHHHHHhCC-----CCeEEEeCCCCCCccccCHHHHHHHHHH
Confidence 99988888888876 6799999999999987776666655554
No 20
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.90 E-value=8.9e-23 Score=156.62 Aligned_cols=182 Identities=18% Similarity=0.190 Sum_probs=128.6
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025145 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
.+|+|||+||++.+...|..+++.|. .+|+|+++|+||+|.+.... ...++.+.++++.++
T Consensus 12 ~~~~li~~hg~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~------------------~~~~~~~~~~~~~~~ 72 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMWDPVLPALT-PDFRVLRYDKRGHGLSDAPE------------------GPYSIEDLADDVLAL 72 (251)
T ss_pred CCCeEEEEcCcccchhhHHHHHHHhh-cccEEEEecCCCCCCCCCCC------------------CCCCHHHHHHHHHHH
Confidence 56899999999999999999999986 68999999999876542110 122345556666666
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch--h-------------------
Q 025145 113 LSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR--N------------------- 171 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~------------------- 171 (257)
++.... +++.++||||||.+++.++.+. |+.+++++++++...... .
T Consensus 73 i~~~~~-~~v~liG~S~Gg~~a~~~a~~~-----------p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (251)
T TIGR02427 73 LDHLGI-ERAVFCGLSLGGLIAQGLAARR-----------PDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADA 140 (251)
T ss_pred HHHhCC-CceEEEEeCchHHHHHHHHHHC-----------HHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHH
Confidence 665433 3899999999999999999854 667777766653211000 0
Q ss_pred -hhh----ccc-------------------------------cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhh
Q 025145 172 -LRN----KIE-------------------------------GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLS 215 (257)
Q Consensus 172 -~~~----~~~-------------------------------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~ 215 (257)
... ... .........+++|+++++|++|..+|.+..+.+.+.++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~ 220 (251)
T TIGR02427 141 VLERWFTPGFREAHPARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVP 220 (251)
T ss_pred HHHHHcccccccCChHHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCC
Confidence 000 000 00011234567999999999999999998888888776
Q ss_pred hcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025145 216 ISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 216 ~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
+.+++++++++|....+..+.+.+.+.+++
T Consensus 221 -----~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl 250 (251)
T TIGR02427 221 -----GARFAEIRGAGHIPCVEQPEAFNAALRDFL 250 (251)
T ss_pred -----CceEEEECCCCCcccccChHHHHHHHHHHh
Confidence 568999999999988777777777666654
No 21
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.90 E-value=1.9e-22 Score=157.65 Aligned_cols=183 Identities=23% Similarity=0.284 Sum_probs=129.4
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025145 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
..++|||+||++++...|..+...|+ ++|+|+++|+||+|.+.... ....++...++++.++
T Consensus 27 ~~~~vv~~hG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~-----------------~~~~~~~~~~~~l~~~ 88 (278)
T TIGR03056 27 AGPLLLLLHGTGASTHSWRDLMPPLA-RSFRVVAPDLPGHGFTRAPF-----------------RFRFTLPSMAEDLSAL 88 (278)
T ss_pred CCCeEEEEcCCCCCHHHHHHHHHHHh-hCcEEEeecCCCCCCCCCcc-----------------ccCCCHHHHHHHHHHH
Confidence 45799999999999999999999997 57999999999887543211 0123455666677777
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch----------------------
Q 025145 113 LSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR---------------------- 170 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---------------------- 170 (257)
+++... ++++|+||||||.+++.++.+. +.++++++++++......
T Consensus 89 i~~~~~-~~~~lvG~S~Gg~~a~~~a~~~-----------p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (278)
T TIGR03056 89 CAAEGL-SPDGVIGHSAGAAIALRLALDG-----------PVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPP 156 (278)
T ss_pred HHHcCC-CCceEEEECccHHHHHHHHHhC-----------CcccceEEEEcCcccccccccccccchhhHhhhhcccchH
Confidence 765443 3889999999999999999854 667777776654321000
Q ss_pred ----------hhhhcc-------------------ccc-----------------hHHHhhhcCCCEEEEccCCCCcccc
Q 025145 171 ----------NLRNKI-------------------EGS-----------------HEAARRAASLPILLTHGLCDDVVPY 204 (257)
Q Consensus 171 ----------~~~~~~-------------------~~~-----------------~~~~~~~~~~P~l~~~G~~D~~v~~ 204 (257)
...... ... .......+++|+++++|++|.++|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~ 236 (278)
T TIGR03056 157 MMSRGAADQQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPP 236 (278)
T ss_pred HHHhhcccCcchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCH
Confidence 000000 000 0011234678999999999999999
Q ss_pred hhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025145 205 KYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 205 ~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
+..+.+.+.++ +++++.++++||.+..+..+.+.+-|.+++
T Consensus 237 ~~~~~~~~~~~-----~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~ 277 (278)
T TIGR03056 237 DESKRAATRVP-----TATLHVVPGGGHLVHEEQADGVVGLILQAA 277 (278)
T ss_pred HHHHHHHHhcc-----CCeEEEECCCCCcccccCHHHHHHHHHHHh
Confidence 88888888776 668999999999988766666666665554
No 22
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.90 E-value=1.2e-22 Score=156.83 Aligned_cols=183 Identities=17% Similarity=0.159 Sum_probs=128.5
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025145 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
..+|+|||+||++++...|..++..|+ .+|.|+++|+||+|.+... ...++.+.++++..
T Consensus 14 ~~~~~iv~lhG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~s~~~-------------------~~~~~~~~~~d~~~ 73 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLDNLGVLARDLV-NDHDIIQVDMRNHGLSPRD-------------------PVMNYPAMAQDLLD 73 (255)
T ss_pred CCCCCEEEECCCCCchhHHHHHHHHHh-hCCeEEEECCCCCCCCCCC-------------------CCCCHHHHHHHHHH
Confidence 456899999999999999999999997 6799999999987654311 01244556666666
Q ss_pred HhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc--h---h---------------
Q 025145 112 LLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS--R---N--------------- 171 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~---~--------------- 171 (257)
+++..... ++.|+||||||.+++.++.+. ++++++++++++..... . .
T Consensus 74 ~l~~l~~~-~~~lvGhS~Gg~va~~~a~~~-----------~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (255)
T PRK10673 74 TLDALQIE-KATFIGHSMGGKAVMALTALA-----------PDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATT 141 (255)
T ss_pred HHHHcCCC-ceEEEEECHHHHHHHHHHHhC-----------HhhcceEEEEecCCCCccchhhHHHHHHHHHhhhccccc
Confidence 66655433 899999999999999999854 78899988874311000 0 0
Q ss_pred -------hhhcccc-------------------ch----HH-------HhhhcCCCEEEEccCCCCcccchhhHHHHHHh
Q 025145 172 -------LRNKIEG-------------------SH----EA-------ARRAASLPILLTHGLCDDVVPYKYGEKSANCL 214 (257)
Q Consensus 172 -------~~~~~~~-------------------~~----~~-------~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l 214 (257)
+...+.. .. .. ....+++|+++++|++|..++.+..+.+.+.+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~ 221 (255)
T PRK10673 142 RQQAAAIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQF 221 (255)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhC
Confidence 0000000 00 00 01234689999999999999988888888887
Q ss_pred hhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025145 215 SISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 215 ~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
+ ++++.+++++||.+..+..+.+.+-+.+++.
T Consensus 222 ~-----~~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~ 253 (255)
T PRK10673 222 P-----QARAHVIAGAGHWVHAEKPDAVLRAIRRYLN 253 (255)
T ss_pred C-----CcEEEEeCCCCCeeeccCHHHHHHHHHHHHh
Confidence 6 6789999999999886555555555554443
No 23
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.90 E-value=2.5e-22 Score=153.60 Aligned_cols=176 Identities=22% Similarity=0.166 Sum_probs=125.1
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025145 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
.+|+|||+||++++...|..+++.|. .+|+|+++|+||+|.+... ...++.+.++.+.+.
T Consensus 3 g~~~iv~~HG~~~~~~~~~~~~~~l~-~~~~vi~~d~~G~G~s~~~-------------------~~~~~~~~~~~~~~~ 62 (245)
T TIGR01738 3 GNVHLVLIHGWGMNAEVFRCLDEELS-AHFTLHLVDLPGHGRSRGF-------------------GPLSLADAAEAIAAQ 62 (245)
T ss_pred CCceEEEEcCCCCchhhHHHHHHhhc-cCeEEEEecCCcCccCCCC-------------------CCcCHHHHHHHHHHh
Confidence 34789999999999999999999997 5799999999987643210 112344555555444
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc--h---------hh---------
Q 025145 113 LSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS--R---------NL--------- 172 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~---------~~--------- 172 (257)
+. .+++++||||||.+++.++.+. |+++.++|++++..... . ..
T Consensus 63 ~~-----~~~~lvG~S~Gg~~a~~~a~~~-----------p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (245)
T TIGR01738 63 AP-----DPAIWLGWSLGGLVALHIAATH-----------PDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSD 126 (245)
T ss_pred CC-----CCeEEEEEcHHHHHHHHHHHHC-----------HHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhh
Confidence 32 3899999999999999999854 77788888775432100 0 00
Q ss_pred --h----hc-----cc-------------------c----------------chHHHhhhcCCCEEEEccCCCCcccchh
Q 025145 173 --R----NK-----IE-------------------G----------------SHEAARRAASLPILLTHGLCDDVVPYKY 206 (257)
Q Consensus 173 --~----~~-----~~-------------------~----------------~~~~~~~~~~~P~l~~~G~~D~~v~~~~ 206 (257)
. .. .. . ........+++|+++++|++|..+|.+.
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~ 206 (245)
T TIGR01738 127 DYQRTIERFLALQTLGTPTARQDARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKV 206 (245)
T ss_pred hHHHHHHHHHHHHHhcCCccchHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHH
Confidence 0 00 00 0 0001234678999999999999999998
Q ss_pred hHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHh
Q 025145 207 GEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTAR 249 (257)
Q Consensus 207 ~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~ 249 (257)
.+.+.+.++ ++++++++++||....+..+.+.+-+.++
T Consensus 207 ~~~~~~~~~-----~~~~~~~~~~gH~~~~e~p~~~~~~i~~f 244 (245)
T TIGR01738 207 VPYLDKLAP-----HSELYIFAKAAHAPFLSHAEAFCALLVAF 244 (245)
T ss_pred HHHHHHhCC-----CCeEEEeCCCCCCccccCHHHHHHHHHhh
Confidence 888888876 67899999999999877666666665554
No 24
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.90 E-value=1.8e-21 Score=151.53 Aligned_cols=206 Identities=15% Similarity=0.158 Sum_probs=134.9
Q ss_pred CCCceEEEEEccCCCCccchHHH--h-hcCCCCceEEEccCCCCCCcccCCCCc------ccccccCCCCCCCCCCchhh
Q 025145 31 GKHQATIVWLHGLGDNGSSWSQL--L-ESLPLPNIKWICPTAPTRPVAILGGFP------CTAWFDVGELSDDGPEDWEG 101 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~~~~--~-~~l~~~g~~v~~~d~~~~g~~~~~g~~------~~~w~~~~~~~~~~~~~~~~ 101 (257)
..+.|+|+|+||++++...|... . ..++..|+.|++||.+.+|.+...... ..+||...... ........
T Consensus 39 ~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~-~~~~~~~~ 117 (275)
T TIGR02821 39 AGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEE-PWSQHYRM 117 (275)
T ss_pred CCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcC-cccccchH
Confidence 34679999999999998887532 2 333456999999998666554322100 01222110000 00111112
Q ss_pred HHHHHHHHHHHhccC--CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh------hh
Q 025145 102 LDASAAHIANLLSTE--PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN------LR 173 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------~~ 173 (257)
....++.+..+++.. ...++++++||||||++++.++.+. |+.+++++++++....... +.
T Consensus 118 ~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~-----------p~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (275)
T TIGR02821 118 YSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKN-----------PDRFKSVSAFAPIVAPSRCPWGQKAFS 186 (275)
T ss_pred HHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhC-----------cccceEEEEECCccCcccCcchHHHHH
Confidence 233345555555542 2335899999999999999999954 8889999998887532210 00
Q ss_pred hcccc--------chHH--HhhhcCCCEEEEccCCCCcccc-hhhHHHHHHhhhcCceeeEEEEecCCCCccC--HHHHH
Q 025145 174 NKIEG--------SHEA--ARRAASLPILLTHGLCDDVVPY-KYGEKSANCLSISGFRHLTFKSFEGLGHYTV--PKEMD 240 (257)
Q Consensus 174 ~~~~~--------~~~~--~~~~~~~P~l~~~G~~D~~v~~-~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~--~~~~~ 240 (257)
..+.. .... .......|+++.+|+.|..++. .....+.+.+++.++ ++++.++||++|.+. .+.+.
T Consensus 187 ~~l~~~~~~~~~~~~~~~~~~~~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~-~v~~~~~~g~~H~f~~~~~~~~ 265 (275)
T TIGR02821 187 AYLGADEAAWRSYDASLLVADGGRHSTILIDQGTADQFLDEQLRPDAFEQACRAAGQ-ALTLRRQAGYDHSYYFIASFIA 265 (275)
T ss_pred HHhcccccchhhcchHHHHhhcccCCCeeEeecCCCcccCccccHHHHHHHHHHcCC-CeEEEEeCCCCccchhHHHhHH
Confidence 00000 0001 1112467999999999999998 577899999999988 799999999999886 77788
Q ss_pred HHHHHHHHh
Q 025145 241 EVCNWLTAR 249 (257)
Q Consensus 241 ~~~~~l~~~ 249 (257)
..++|..+.
T Consensus 266 ~~~~~~~~~ 274 (275)
T TIGR02821 266 DHLRHHAER 274 (275)
T ss_pred HHHHHHHhh
Confidence 899988765
No 25
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.90 E-value=4e-22 Score=156.28 Aligned_cols=191 Identities=19% Similarity=0.170 Sum_probs=126.3
Q ss_pred EEeCCCCCCceEEEEEccCCCCccchHHH---hhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhh
Q 025145 25 HVVRPKGKHQATIVWLHGLGDNGSSWSQL---LESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEG 101 (257)
Q Consensus 25 ~~~~~~~~~~~~vi~~HG~~~~~~~~~~~---~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 101 (257)
+.+...++ .++|||+||++++...|..+ +..+...+|+|+++|+||+|.+.... ......
T Consensus 22 ~~y~~~g~-~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~----------------~~~~~~ 84 (282)
T TIGR03343 22 IHYNEAGN-GEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVV----------------MDEQRG 84 (282)
T ss_pred EEEEecCC-CCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCc----------------Cccccc
Confidence 34444443 46899999999888777643 34454578999999999886543210 000001
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCC-------Cc-h---
Q 025145 102 LDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLP-------GS-R--- 170 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-------~~-~--- 170 (257)
...++++.++++..... +++++||||||.+++.++.+. |+++++++++++... .. .
T Consensus 85 -~~~~~~l~~~l~~l~~~-~~~lvG~S~Gg~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 151 (282)
T TIGR03343 85 -LVNARAVKGLMDALDIE-KAHLVGNSMGGATALNFALEY-----------PDRIGKLILMGPGGLGPSLFAPMPMEGIK 151 (282)
T ss_pred -chhHHHHHHHHHHcCCC-CeeEEEECchHHHHHHHHHhC-----------hHhhceEEEECCCCCCccccccCchHHHH
Confidence 12244555555554333 999999999999999999954 788888887765210 00 0
Q ss_pred hhhh------------c----------------------ccc--------------------chHHHhhhcCCCEEEEcc
Q 025145 171 NLRN------------K----------------------IEG--------------------SHEAARRAASLPILLTHG 196 (257)
Q Consensus 171 ~~~~------------~----------------------~~~--------------------~~~~~~~~~~~P~l~~~G 196 (257)
.... . ... ........+++|+++++|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G 231 (282)
T TIGR03343 152 LLFKLYAEPSYETLKQMLNVFLFDQSLITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWG 231 (282)
T ss_pred HHHHHhcCCCHHHHHHHHhhCccCcccCcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEc
Confidence 0000 0 000 000123457899999999
Q ss_pred CCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025145 197 LCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 197 ~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
++|.+++.+.++++.+.++ ++++++++++||.+..+..+.+.+.|.+++
T Consensus 232 ~~D~~v~~~~~~~~~~~~~-----~~~~~~i~~agH~~~~e~p~~~~~~i~~fl 280 (282)
T TIGR03343 232 RDDRFVPLDHGLKLLWNMP-----DAQLHVFSRCGHWAQWEHADAFNRLVIDFL 280 (282)
T ss_pred cCCCcCCchhHHHHHHhCC-----CCEEEEeCCCCcCCcccCHHHHHHHHHHHh
Confidence 9999999999999999887 679999999999998766665555555544
No 26
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.89 E-value=1.6e-22 Score=152.77 Aligned_cols=175 Identities=27% Similarity=0.330 Sum_probs=133.3
Q ss_pred EEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhccC
Q 025145 37 IVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTE 116 (257)
Q Consensus 37 vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (257)
|||+||++++...|..+++.|+ +||.|+++|+||+|.+.... .....++.+.+.++.++++..
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~----------------~~~~~~~~~~~~~l~~~l~~~ 63 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPP----------------DYSPYSIEDYAEDLAELLDAL 63 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHS----------------SGSGGSHHHHHHHHHHHHHHT
T ss_pred eEEECCCCCCHHHHHHHHHHHh-CCCEEEEEecCCcccccccc----------------ccCCcchhhhhhhhhhccccc
Confidence 7999999999999999999995 89999999999876433211 012445677777888888776
Q ss_pred CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhh---------hhcc-----------
Q 025145 117 PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNL---------RNKI----------- 176 (257)
Q Consensus 117 ~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---------~~~~----------- 176 (257)
... +++++|||+||.+++.++.+. |+++++++++++........ ....
T Consensus 64 ~~~-~~~lvG~S~Gg~~a~~~a~~~-----------p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (228)
T PF12697_consen 64 GIK-KVILVGHSMGGMIALRLAARY-----------PDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLA 131 (228)
T ss_dssp TTS-SEEEEEETHHHHHHHHHHHHS-----------GGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccc-ccccccccccccccccccccc-----------ccccccceeecccccccccccccccchhhhhhhhcccccccccc
Confidence 554 999999999999999999854 88999999998877422110 0000
Q ss_pred -----------------c----------------cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeE
Q 025145 177 -----------------E----------------GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLT 223 (257)
Q Consensus 177 -----------------~----------------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~ 223 (257)
. .........+++|+++++|++|.+++.+..+.+.+.++ +++
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~-----~~~ 206 (228)
T PF12697_consen 132 SRFFYRWFDGDEPEDLIRSSRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLP-----NAE 206 (228)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHST-----TEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCC-----CCE
Confidence 0 00011334568999999999999999888888888876 679
Q ss_pred EEEecCCCCccCHHHHHHHHHH
Q 025145 224 FKSFEGLGHYTVPKEMDEVCNW 245 (257)
Q Consensus 224 ~~~~~g~~H~~~~~~~~~~~~~ 245 (257)
+++++++||.+..+..+.+.+|
T Consensus 207 ~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 207 LVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp EEEETTSSSTHHHHSHHHHHHH
T ss_pred EEEECCCCCccHHHCHHHHhcC
Confidence 9999999999998888887765
No 27
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.89 E-value=4.6e-22 Score=156.88 Aligned_cols=181 Identities=15% Similarity=0.127 Sum_probs=123.4
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025145 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
.++|||+||++++...|..+++.|++. ++|+++|+||+|.+.... ...++.+.++++.+++
T Consensus 27 g~~vvllHG~~~~~~~w~~~~~~L~~~-~~via~D~~G~G~S~~~~------------------~~~~~~~~a~dl~~ll 87 (295)
T PRK03592 27 GDPIVFLHGNPTSSYLWRNIIPHLAGL-GRCLAPDLIGMGASDKPD------------------IDYTFADHARYLDAWF 87 (295)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHhhC-CEEEEEcCCCCCCCCCCC------------------CCCCHHHHHHHHHHHH
Confidence 468999999999999999999999865 599999999876543221 1134566677777777
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCC------ch-------hhh-------
Q 025145 114 STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPG------SR-------NLR------- 173 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------~~-------~~~------- 173 (257)
+..... +++|+||||||.+++.++.+. |+++++++++++.... .. .+.
T Consensus 88 ~~l~~~-~~~lvGhS~Gg~ia~~~a~~~-----------p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (295)
T PRK03592 88 DALGLD-DVVLVGHDWGSALGFDWAARH-----------PDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEE 155 (295)
T ss_pred HHhCCC-CeEEEEECHHHHHHHHHHHhC-----------hhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccc
Confidence 765444 999999999999999999964 8888888887753210 00 000
Q ss_pred ---------h-cccc-------------------ch-----------------------------HHHhhhcCCCEEEEc
Q 025145 174 ---------N-KIEG-------------------SH-----------------------------EAARRAASLPILLTH 195 (257)
Q Consensus 174 ---------~-~~~~-------------------~~-----------------------------~~~~~~~~~P~l~~~ 195 (257)
. .... .. ......+++|+++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~ 235 (295)
T PRK03592 156 MVLEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLIN 235 (295)
T ss_pred cccchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEe
Confidence 0 0000 00 001133689999999
Q ss_pred cCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHh
Q 025145 196 GLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTAR 249 (257)
Q Consensus 196 G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~ 249 (257)
|++|..++.....++...+.. +.++++++++||.++.+..+.+.+-|.++
T Consensus 236 G~~D~~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e~p~~v~~~i~~f 285 (295)
T PRK03592 236 AEPGAILTTGAIRDWCRSWPN----QLEITVFGAGLHFAQEDSPEEIGAAIAAW 285 (295)
T ss_pred ccCCcccCcHHHHHHHHHhhh----hcceeeccCcchhhhhcCHHHHHHHHHHH
Confidence 999999965555555444321 56899999999999855544444444333
No 28
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.89 E-value=2.2e-22 Score=143.67 Aligned_cols=181 Identities=17% Similarity=0.167 Sum_probs=127.0
Q ss_pred eEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhc
Q 025145 35 ATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLS 114 (257)
Q Consensus 35 ~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (257)
.+||++||+.++..+.+.+++.|.++||.|.+|.+||||..... | ......++-..+.+..+.+.
T Consensus 16 ~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~-------f--------l~t~~~DW~~~v~d~Y~~L~ 80 (243)
T COG1647 16 RAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPED-------F--------LKTTPRDWWEDVEDGYRDLK 80 (243)
T ss_pred EEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHH-------H--------hcCCHHHHHHHHHHHHHHHH
Confidence 69999999999999999999999999999999999998754311 0 00012222222222223333
Q ss_pred cCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch------------------------
Q 025145 115 TEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR------------------------ 170 (257)
Q Consensus 115 ~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------------------------ 170 (257)
...- +.|+++|.||||.+++.++.+ +| +++++.+|+......
T Consensus 81 ~~gy-~eI~v~GlSmGGv~alkla~~-----------~p--~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e 146 (243)
T COG1647 81 EAGY-DEIAVVGLSMGGVFALKLAYH-----------YP--PKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQE 146 (243)
T ss_pred HcCC-CeEEEEeecchhHHHHHHHhh-----------CC--ccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHH
Confidence 2222 389999999999999999984 24 788888776532110
Q ss_pred hhhhcc---c--------------cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCc
Q 025145 171 NLRNKI---E--------------GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHY 233 (257)
Q Consensus 171 ~~~~~~---~--------------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~ 233 (257)
.+.+.+ . .........+..|+++++|.+|+.+|.+.+..+++.+... +.++.++++.||.
T Consensus 147 ~~~~e~~~~~~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~---~KeL~~~e~SgHV 223 (243)
T COG1647 147 QIDKEMKSYKDTPMTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESD---DKELKWLEGSGHV 223 (243)
T ss_pred HHHHHHHHhhcchHHHHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCC---cceeEEEccCCce
Confidence 000000 0 0011144668899999999999999999999999999865 6799999999998
Q ss_pred cCHH-----HHHHHHHHHH
Q 025145 234 TVPK-----EMDEVCNWLT 247 (257)
Q Consensus 234 ~~~~-----~~~~~~~~l~ 247 (257)
+..+ ..+.+..||+
T Consensus 224 It~D~Erd~v~e~V~~FL~ 242 (243)
T COG1647 224 ITLDKERDQVEEDVITFLE 242 (243)
T ss_pred eecchhHHHHHHHHHHHhh
Confidence 7632 3466777765
No 29
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.89 E-value=1.2e-21 Score=158.24 Aligned_cols=187 Identities=20% Similarity=0.154 Sum_probs=123.6
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025145 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
.|+|||+||++++...|..++..|+ .+|+|+++|+||+|.+.... ....++...++++.+++
T Consensus 88 gp~lvllHG~~~~~~~w~~~~~~L~-~~~~via~Dl~G~G~S~~~~-----------------~~~~~~~~~a~~l~~~l 149 (360)
T PLN02679 88 GPPVLLVHGFGASIPHWRRNIGVLA-KNYTVYAIDLLGFGASDKPP-----------------GFSYTMETWAELILDFL 149 (360)
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHh-cCCEEEEECCCCCCCCCCCC-----------------CccccHHHHHHHHHHHH
Confidence 4789999999999999999999997 58999999999876542210 01234456666777777
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc------h-h---------------
Q 025145 114 STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS------R-N--------------- 171 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~-~--------------- 171 (257)
+..... +++|+||||||.+++.++.+ .+|++++++|++++..... . .
T Consensus 150 ~~l~~~-~~~lvGhS~Gg~ia~~~a~~----------~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (360)
T PLN02679 150 EEVVQK-PTVLIGNSVGSLACVIAASE----------STRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLL 218 (360)
T ss_pred HHhcCC-CeEEEEECHHHHHHHHHHHh----------cChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHh
Confidence 655444 99999999999999988863 1377888888776431100 0 0
Q ss_pred --------hhhc------c--------cc-----------------------------------chHHHhhhcCCCEEEE
Q 025145 172 --------LRNK------I--------EG-----------------------------------SHEAARRAASLPILLT 194 (257)
Q Consensus 172 --------~~~~------~--------~~-----------------------------------~~~~~~~~~~~P~l~~ 194 (257)
+... + .. ........+++|+|++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii 298 (360)
T PLN02679 219 KQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVL 298 (360)
T ss_pred hchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEE
Confidence 0000 0 00 0001223468999999
Q ss_pred ccCCCCcccchhh-HHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025145 195 HGLCDDVVPYKYG-EKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 195 ~G~~D~~v~~~~~-~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
+|++|.++|.+.. .+..+.+.+. .++.++++++++||.++.|..+.+.+.|.+++
T Consensus 299 ~G~~D~~~p~~~~~~~~~~~l~~~-ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL 354 (360)
T PLN02679 299 WGDQDPFTPLDGPVGKYFSSLPSQ-LPNVTLYVLEGVGHCPHDDRPDLVHEKLLPWL 354 (360)
T ss_pred EeCCCCCcCchhhHHHHHHhhhcc-CCceEEEEcCCCCCCccccCHHHHHHHHHHHH
Confidence 9999999998642 2223333221 12679999999999988666555554444444
No 30
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.88 E-value=6.2e-22 Score=149.18 Aligned_cols=197 Identities=19% Similarity=0.232 Sum_probs=123.4
Q ss_pred EeCCCC-CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCc-ccCC-CCcccccccCCCCCCCCCCchhhH
Q 025145 26 VVRPKG-KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPV-AILG-GFPCTAWFDVGELSDDGPEDWEGL 102 (257)
Q Consensus 26 ~~~~~~-~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~-~~~~-g~~~~~w~~~~~~~~~~~~~~~~~ 102 (257)
+..|.+ .+.|.||++|++.+-....+.+++.|+..||.|++||+-.... .... ......+... .....+..
T Consensus 5 ~~~P~~~~~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 78 (218)
T PF01738_consen 5 VARPEGGGPRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMREL------FAPRPEQV 78 (218)
T ss_dssp EEEETTSSSEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHC------HHHSHHHH
T ss_pred EEeCCCCCCCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHH------HhhhHHHH
Confidence 333443 4889999999998887778889999999999999999642211 0000 0000000000 00001223
Q ss_pred HHHHHHHHHHhccCC--CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccch
Q 025145 103 DASAAHIANLLSTEP--ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSH 180 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 180 (257)
...+....++++... ...+|+++|+|+||.+++.++.+ .+.+++++.+.|..... ..
T Consensus 79 ~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~------------~~~~~a~v~~yg~~~~~---------~~ 137 (218)
T PF01738_consen 79 AADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAAR------------DPRVDAAVSFYGGSPPP---------PP 137 (218)
T ss_dssp HHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCC------------TTTSSEEEEES-SSSGG---------GH
T ss_pred HHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhh------------ccccceEEEEcCCCCCC---------cc
Confidence 333334455555544 33699999999999999999873 35789999888711111 12
Q ss_pred HHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC------------HHHHHHHHHHHHH
Q 025145 181 EAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV------------PKEMDEVCNWLTA 248 (257)
Q Consensus 181 ~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~------------~~~~~~~~~~l~~ 248 (257)
......+++|+++++|++|+.++.+..+.+.+.+++.+. ++++++|||++|.+. .+.++++++||++
T Consensus 138 ~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~-~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~ 216 (218)
T PF01738_consen 138 LEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGV-DVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKR 216 (218)
T ss_dssp HHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTT-TEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC
T ss_pred hhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCC-cEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHh
Confidence 223456789999999999999999999999999988887 899999999999886 2357888888877
Q ss_pred hc
Q 025145 249 RL 250 (257)
Q Consensus 249 ~l 250 (257)
.|
T Consensus 217 ~L 218 (218)
T PF01738_consen 217 HL 218 (218)
T ss_dssp --
T ss_pred cC
Confidence 54
No 31
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.88 E-value=1.7e-21 Score=151.35 Aligned_cols=186 Identities=15% Similarity=0.132 Sum_probs=132.5
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025145 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
+.+|+|||+||++.+...|..+...|.+.||+|+++|+|++|.+... .....++.+.++.+.+
T Consensus 16 ~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~-----------------~~~~~~~~~~~~~l~~ 78 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSD-----------------ADSVTTFDEYNKPLID 78 (273)
T ss_pred CCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCC-----------------cccCCCHHHHHHHHHH
Confidence 34679999999999999999999999878999999999987532110 1112455666777777
Q ss_pred HhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch--h----------hh------
Q 025145 112 LLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR--N----------LR------ 173 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~----------~~------ 173 (257)
+++.....++++|+||||||.++..++.+. +++++++|.++++.+... . +.
T Consensus 79 ~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~-----------p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 147 (273)
T PLN02211 79 FLSSLPENEKVILVGHSAGGLSVTQAIHRF-----------PKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVY 147 (273)
T ss_pred HHHhcCCCCCEEEEEECchHHHHHHHHHhC-----------hhheeEEEEeccccCCCCCCHHHHHhccccchhhhccce
Confidence 777654335999999999999999999853 677778777755432100 0 00
Q ss_pred -------------hc-c----------ccchH----------------------H--Hhhhc-CCCEEEEccCCCCcccc
Q 025145 174 -------------NK-I----------EGSHE----------------------A--ARRAA-SLPILLTHGLCDDVVPY 204 (257)
Q Consensus 174 -------------~~-~----------~~~~~----------------------~--~~~~~-~~P~l~~~G~~D~~v~~ 204 (257)
.. . ...+. . ..... ++|+++|.|++|..+|+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~ 227 (273)
T PLN02211 148 ELGFGLGPDQPPTSAIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKP 227 (273)
T ss_pred eeeeccCCCCCCceeeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCH
Confidence 00 0 00000 0 00112 67999999999999999
Q ss_pred hhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025145 205 KYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 205 ~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
+..+.+.+.++ ..+++.++ +||..+.+..+.+.+.|.+..+
T Consensus 228 ~~~~~m~~~~~-----~~~~~~l~-~gH~p~ls~P~~~~~~i~~~a~ 268 (273)
T PLN02211 228 EQQEAMIKRWP-----PSQVYELE-SDHSPFFSTPFLLFGLLIKAAA 268 (273)
T ss_pred HHHHHHHHhCC-----ccEEEEEC-CCCCccccCHHHHHHHHHHHHH
Confidence 99999998886 44788887 7999998888888888877543
No 32
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.88 E-value=1.5e-21 Score=167.14 Aligned_cols=195 Identities=23% Similarity=0.271 Sum_probs=135.6
Q ss_pred ceEEEEEccCCCCccc--hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025145 34 QATIVWLHGLGDNGSS--WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
.|+||++||....... |....+.|+..||.|+.++.||. .|++. . |......+.. ...+.+..+.+.
T Consensus 394 yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS-----~GyG~-~-F~~~~~~~~g---~~~~~D~~~~~~- 462 (620)
T COG1506 394 YPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGS-----TGYGR-E-FADAIRGDWG---GVDLEDLIAAVD- 462 (620)
T ss_pred CCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCC-----CccHH-H-HHHhhhhccC---CccHHHHHHHHH-
Confidence 4999999998654443 56677888889999999998742 22211 1 1111111111 223344444444
Q ss_pred HhccC--CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc--------------hh----
Q 025145 112 LLSTE--PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS--------------RN---- 171 (257)
Q Consensus 112 ~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------------~~---- 171 (257)
++.+. .+.+|++++|+|+||++++.++.+. + .+++.++..+..... +.
T Consensus 463 ~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~-----------~-~f~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (620)
T COG1506 463 ALVKLPLVDPERIGITGGSYGGYMTLLAATKT-----------P-RFKAAVAVAGGVDWLLYFGESTEGLRFDPEENGGG 530 (620)
T ss_pred HHHhCCCcChHHeEEeccChHHHHHHHHHhcC-----------c-hhheEEeccCcchhhhhccccchhhcCCHHHhCCC
Confidence 44333 3336999999999999999999852 4 677766655421100 00
Q ss_pred ----hhhccccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCH-----HHHHHH
Q 025145 172 ----LRNKIEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVP-----KEMDEV 242 (257)
Q Consensus 172 ----~~~~~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~-----~~~~~~ 242 (257)
........+.....++++|+|+|||++|..||.+++.++++.|+..|+ ++++++||+.+|.+.. +.++++
T Consensus 531 ~~~~~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~-~~~~~~~p~e~H~~~~~~~~~~~~~~~ 609 (620)
T COG1506 531 PPEDREKYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGK-PVELVVFPDEGHGFSRPENRVKVLKEI 609 (620)
T ss_pred cccChHHHHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCc-eEEEEEeCCCCcCCCCchhHHHHHHHH
Confidence 011223344556788899999999999999999999999999999888 8999999999999873 357899
Q ss_pred HHHHHHhcCc
Q 025145 243 CNWLTARLGL 252 (257)
Q Consensus 243 ~~~l~~~l~~ 252 (257)
++|+.+.++.
T Consensus 610 ~~~~~~~~~~ 619 (620)
T COG1506 610 LDWFKRHLKQ 619 (620)
T ss_pred HHHHHHHhcC
Confidence 9999988764
No 33
>PLN02578 hydrolase
Probab=99.88 E-value=2.3e-21 Score=156.31 Aligned_cols=180 Identities=18% Similarity=0.092 Sum_probs=125.3
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025145 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
.++|||+||++++...|..++..|+ .+|.|+++|+||+|.+... ....+.....+++.+++
T Consensus 86 g~~vvliHG~~~~~~~w~~~~~~l~-~~~~v~~~D~~G~G~S~~~------------------~~~~~~~~~a~~l~~~i 146 (354)
T PLN02578 86 GLPIVLIHGFGASAFHWRYNIPELA-KKYKVYALDLLGFGWSDKA------------------LIEYDAMVWRDQVADFV 146 (354)
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHh-cCCEEEEECCCCCCCCCCc------------------ccccCHHHHHHHHHHHH
Confidence 3679999999999999999999997 5799999999987643221 01123344455666666
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc--------------hhhh------
Q 025145 114 STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS--------------RNLR------ 173 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------------~~~~------ 173 (257)
+..... +++++|||+||.+++.++.+. |+++++++++++..... ....
T Consensus 147 ~~~~~~-~~~lvG~S~Gg~ia~~~A~~~-----------p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (354)
T PLN02578 147 KEVVKE-PAVLVGNSLGGFTALSTAVGY-----------PELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKP 214 (354)
T ss_pred HHhccC-CeEEEEECHHHHHHHHHHHhC-----------hHhcceEEEECCCccccccccccccccccccchhhHHHhHH
Confidence 554433 899999999999999999954 78888888765421000 0000
Q ss_pred ------h----------------------ccc---------------------------------------cchHHHhhh
Q 025145 174 ------N----------------------KIE---------------------------------------GSHEAARRA 186 (257)
Q Consensus 174 ------~----------------------~~~---------------------------------------~~~~~~~~~ 186 (257)
. .+. .........
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 294 (354)
T PLN02578 215 LKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSK 294 (354)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhc
Confidence 0 000 000012244
Q ss_pred cCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025145 187 ASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 187 ~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
+++|+++++|++|.+++.+.++.+.+.++ +.++++++ +||..+.+..+.+.+-|.+++
T Consensus 295 i~~PvLiI~G~~D~~v~~~~~~~l~~~~p-----~a~l~~i~-~GH~~~~e~p~~~~~~I~~fl 352 (354)
T PLN02578 295 LSCPLLLLWGDLDPWVGPAKAEKIKAFYP-----DTTLVNLQ-AGHCPHDEVPEQVNKALLEWL 352 (354)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHhCC-----CCEEEEeC-CCCCccccCHHHHHHHHHHHH
Confidence 68999999999999999999888888886 56788885 799998776666666665554
No 34
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.88 E-value=2.7e-21 Score=157.85 Aligned_cols=197 Identities=17% Similarity=0.112 Sum_probs=131.7
Q ss_pred CCCceEEeCCCCCCceEEEEEccCCCCc-cchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCc
Q 025145 20 EFGRTHVVRPKGKHQATIVWLHGLGDNG-SSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPED 98 (257)
Q Consensus 20 ~~~~~~~~~~~~~~~~~vi~~HG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~ 98 (257)
.+...+..+..+++.|+||+.||+++.. ..|..+++.|+..||.|+++|+||+|.+.... .
T Consensus 180 ~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~---------------~--- 241 (414)
T PRK05077 180 PITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWK---------------L--- 241 (414)
T ss_pred EEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCC---------------c---
Confidence 3444444444456778888888887765 45777888888899999999999876542100 0
Q ss_pred hhhHHHHHHHHHHHhccC--CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc-------
Q 025145 99 WEGLDASAAHIANLLSTE--PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS------- 169 (257)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------- 169 (257)
..+.......+.+++... .+..+|+++|||+||++++.++... +++++++|++++.....
T Consensus 242 ~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~-----------p~ri~a~V~~~~~~~~~~~~~~~~ 310 (414)
T PRK05077 242 TQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLE-----------PPRLKAVACLGPVVHTLLTDPKRQ 310 (414)
T ss_pred cccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhC-----------CcCceEEEEECCccchhhcchhhh
Confidence 011122234455555443 2345999999999999999999853 77899999988764210
Q ss_pred ----h----hhhhcccc--ch---------------H-HHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeE
Q 025145 170 ----R----NLRNKIEG--SH---------------E-AARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLT 223 (257)
Q Consensus 170 ----~----~~~~~~~~--~~---------------~-~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~ 223 (257)
. .+...+.. .. . .....+++|+|+++|++|.++|.+.++.+.+..+ +.+
T Consensus 311 ~~~p~~~~~~la~~lg~~~~~~~~l~~~l~~~sl~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~-----~~~ 385 (414)
T PRK05077 311 QQVPEMYLDVLASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSA-----DGK 385 (414)
T ss_pred hhchHHHHHHHHHHhCCCCCChHHHHHHhhhccchhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCC-----CCe
Confidence 0 00000000 00 0 0113578999999999999999999998887775 668
Q ss_pred EEEecCCCCccC-HHHHHHHHHHHHHhc
Q 025145 224 FKSFEGLGHYTV-PKEMDEVCNWLTARL 250 (257)
Q Consensus 224 ~~~~~g~~H~~~-~~~~~~~~~~l~~~l 250 (257)
++++|+..|.-. .+..+.+.+||.+.|
T Consensus 386 l~~i~~~~~~e~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 386 LLEIPFKPVYRNFDKALQEISDWLEDRL 413 (414)
T ss_pred EEEccCCCccCCHHHHHHHHHHHHHHHh
Confidence 999998532222 556788999998765
No 35
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.88 E-value=2.9e-21 Score=148.04 Aligned_cols=173 Identities=19% Similarity=0.245 Sum_probs=118.6
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025145 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
.|+|||+||++++...|..++..|. +|+|+++|+||+|.+.... ..++.+.++++.+++
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l~--~~~vi~~D~~G~G~S~~~~-------------------~~~~~~~~~~l~~~l 60 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEALP--DYPRLYIDLPGHGGSAAIS-------------------VDGFADVSRLLSQTL 60 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHcC--CCCEEEecCCCCCCCCCcc-------------------ccCHHHHHHHHHHHH
Confidence 4689999999999999999999884 6999999999876432110 124567777777888
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCccc-ccceEEEeccCCCCchh------------h--------
Q 025145 114 STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYV-NLRAVVGLSGWLPGSRN------------L-------- 172 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~------------~-------- 172 (257)
+.... ++++++||||||.+++.++.+. ++ ++++++++++....... .
T Consensus 61 ~~~~~-~~~~lvG~S~Gg~va~~~a~~~-----------~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (242)
T PRK11126 61 QSYNI-LPYWLVGYSLGGRIAMYYACQG-----------LAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEP 128 (242)
T ss_pred HHcCC-CCeEEEEECHHHHHHHHHHHhC-----------CcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCc
Confidence 76544 4999999999999999999964 44 38888776543211000 0
Q ss_pred -----hhc--------ccc-------------------------------chHHHhhhcCCCEEEEccCCCCcccchhhH
Q 025145 173 -----RNK--------IEG-------------------------------SHEAARRAASLPILLTHGLCDDVVPYKYGE 208 (257)
Q Consensus 173 -----~~~--------~~~-------------------------------~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~ 208 (257)
... ... ........+++|+++++|++|..+.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~----- 203 (242)
T PRK11126 129 LEQVLADWYQQPVFASLNAEQRQQLVAKRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ----- 203 (242)
T ss_pred HHHHHHHHHhcchhhccCccHHHHHHHhcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----
Confidence 000 000 0001223568999999999998642
Q ss_pred HHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025145 209 KSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 209 ~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
.+.+.. +.++++++++||.++.+..+.+.+.|.+++
T Consensus 204 ~~~~~~------~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 239 (242)
T PRK11126 204 ALAQQL------ALPLHVIPNAGHNAHRENPAAFAASLAQIL 239 (242)
T ss_pred HHHHHh------cCeEEEeCCCCCchhhhChHHHHHHHHHHH
Confidence 222221 568999999999998776666666665554
No 36
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.88 E-value=3e-21 Score=151.27 Aligned_cols=190 Identities=14% Similarity=0.112 Sum_probs=129.1
Q ss_pred EEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHH
Q 025145 25 HVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDA 104 (257)
Q Consensus 25 ~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 104 (257)
+.+...+. .++|||+||++.+...|..+...|. .+|+|+++|+||+|.+..... ....+.+
T Consensus 26 i~y~~~G~-~~~iv~lHG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~-----------------~~~~~~~ 86 (286)
T PRK03204 26 IHYIDEGT-GPPILLCHGNPTWSFLYRDIIVALR-DRFRCVAPDYLGFGLSERPSG-----------------FGYQIDE 86 (286)
T ss_pred EEEEECCC-CCEEEEECCCCccHHHHHHHHHHHh-CCcEEEEECCCCCCCCCCCCc-----------------cccCHHH
Confidence 33433443 4789999999988888999999997 569999999998765432110 0123455
Q ss_pred HHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc---------------
Q 025145 105 SAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS--------------- 169 (257)
Q Consensus 105 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------------- 169 (257)
.+..+.+++++... ++++++||||||.+++.++... |++++++|++++.....
T Consensus 87 ~~~~~~~~~~~~~~-~~~~lvG~S~Gg~va~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 154 (286)
T PRK03204 87 HARVIGEFVDHLGL-DRYLSMGQDWGGPISMAVAVER-----------ADRVRGVVLGNTWFWPADTLAMKAFSRVMSSP 154 (286)
T ss_pred HHHHHHHHHHHhCC-CCEEEEEECccHHHHHHHHHhC-----------hhheeEEEEECccccCCCchhHHHHHHHhccc
Confidence 55566666655433 3899999999999999999854 77888887765432100
Q ss_pred ---hh------hhhc-c-----ccch------------------------H----H--H-h--------hhcCCCEEEEc
Q 025145 170 ---RN------LRNK-I-----EGSH------------------------E----A--A-R--------RAASLPILLTH 195 (257)
Q Consensus 170 ---~~------~~~~-~-----~~~~------------------------~----~--~-~--------~~~~~P~l~~~ 195 (257)
.. +... + .... . . . . ...++|+++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~ 234 (286)
T PRK03204 155 PVQYAILRRNFFVERLIPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVW 234 (286)
T ss_pred cchhhhhhhhHHHHHhccccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEe
Confidence 00 0000 0 0000 0 0 0 0 01279999999
Q ss_pred cCCCCcccch-hhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025145 196 GLCDDVVPYK-YGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 196 G~~D~~v~~~-~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
|++|.++++. ..+.+.+.++ +.++++++++||.++.+..+.+.+.|.+++
T Consensus 235 G~~D~~~~~~~~~~~~~~~ip-----~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 235 GMKDVAFRPKTILPRLRATFP-----DHVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred cCCCcccCcHHHHHHHHHhcC-----CCeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 9999988655 4577777777 679999999999999888888877777665
No 37
>PLN02442 S-formylglutathione hydrolase
Probab=99.88 E-value=9.5e-21 Score=147.73 Aligned_cols=207 Identities=15% Similarity=0.146 Sum_probs=128.6
Q ss_pred CCCceEEEEEccCCCCccchHH---HhhcCCCCceEEEccCCCCCCcccCCCCc------ccccccCCCCCCCCCCch-h
Q 025145 31 GKHQATIVWLHGLGDNGSSWSQ---LLESLPLPNIKWICPTAPTRPVAILGGFP------CTAWFDVGELSDDGPEDW-E 100 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~~~---~~~~l~~~g~~v~~~d~~~~g~~~~~g~~------~~~w~~~~~~~~~~~~~~-~ 100 (257)
+.+.|+|+|+||++++...|.. +.+.++..|+.|+.||..++|........ ..++|............. .
T Consensus 44 ~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (283)
T PLN02442 44 SGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYD 123 (283)
T ss_pred CCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhh
Confidence 3467999999999988877644 33556667999999998876633221110 001111000000000010 1
Q ss_pred -hHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh------hh
Q 025145 101 -GLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN------LR 173 (257)
Q Consensus 101 -~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------~~ 173 (257)
...+....+...+... +.++++|+|+||||++++.++.++ |+.+++++++++....... +.
T Consensus 124 ~~~~~l~~~i~~~~~~~-~~~~~~i~G~S~GG~~a~~~a~~~-----------p~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (283)
T PLN02442 124 YVVKELPKLLSDNFDQL-DTSRASIFGHSMGGHGALTIYLKN-----------PDKYKSVSAFAPIANPINCPWGQKAFT 191 (283)
T ss_pred hHHHHHHHHHHHHHHhc-CCCceEEEEEChhHHHHHHHHHhC-----------chhEEEEEEECCccCcccCchhhHHHH
Confidence 1222233333333322 335899999999999999999954 8899999999887542210 11
Q ss_pred hccccc-----------hHHHhhhcCCCEEEEccCCCCcccch-hhHHHHHHhhhcCceeeEEEEecCCCCccC--HHHH
Q 025145 174 NKIEGS-----------HEAARRAASLPILLTHGLCDDVVPYK-YGEKSANCLSISGFRHLTFKSFEGLGHYTV--PKEM 239 (257)
Q Consensus 174 ~~~~~~-----------~~~~~~~~~~P~l~~~G~~D~~v~~~-~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~--~~~~ 239 (257)
..+... ........++|+++++|++|.+++.. .++.+.+.+++.+. +++++++||.+|.+. ...+
T Consensus 192 ~~~g~~~~~~~~~d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~-~~~~~~~pg~~H~~~~~~~~i 270 (283)
T PLN02442 192 NYLGSDKADWEEYDATELVSKFNDVSATILIDQGEADKFLKEQLLPENFEEACKEAGA-PVTLRLQPGYDHSYFFIATFI 270 (283)
T ss_pred HHcCCChhhHHHcChhhhhhhccccCCCEEEEECCCCccccccccHHHHHHHHHHcCC-CeEEEEeCCCCccHHHHHHHH
Confidence 111000 00112235789999999999999974 47889999999887 799999999999866 3344
Q ss_pred HHHHHHHHHhc
Q 025145 240 DEVCNWLTARL 250 (257)
Q Consensus 240 ~~~~~~l~~~l 250 (257)
++.++|..+.+
T Consensus 271 ~~~~~~~~~~~ 281 (283)
T PLN02442 271 DDHINHHAQAL 281 (283)
T ss_pred HHHHHHHHHHh
Confidence 55555555544
No 38
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.88 E-value=4.2e-21 Score=151.38 Aligned_cols=186 Identities=20% Similarity=0.272 Sum_probs=133.4
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCC-ceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHH
Q 025145 32 KHQATIVWLHGLGDNGSSWSQLLESLPLP-NIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIA 110 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~-g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (257)
..+++||++||++++...|+.+...|... |+.|+++|.+|+|.+. ........++.+....+.
T Consensus 56 ~~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s----------------~~~~~~~y~~~~~v~~i~ 119 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSS----------------PLPRGPLYTLRELVELIR 119 (326)
T ss_pred CCCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCC----------------CCCCCCceehhHHHHHHH
Confidence 46889999999999999999999999854 5999999999865311 111222366677777887
Q ss_pred HHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEE---EeccCCCCch-----------------
Q 025145 111 NLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVV---GLSGWLPGSR----------------- 170 (257)
Q Consensus 111 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i---~~~~~~~~~~----------------- 170 (257)
.+....... ++.++|||+||.+|+.+|+. +|+.++.++ .+.+.....+
T Consensus 120 ~~~~~~~~~-~~~lvghS~Gg~va~~~Aa~-----------~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (326)
T KOG1454|consen 120 RFVKEVFVE-PVSLVGHSLGGIVALKAAAY-----------YPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSAL 187 (326)
T ss_pred HHHHhhcCc-ceEEEEeCcHHHHHHHHHHh-----------CcccccceeeecccccccccCCcchhHHHHhhhhhccHh
Confidence 777766555 79999999999999999995 488888888 4433210000
Q ss_pred -----------------------------------hhhhc---------------------cc--cchHHHhhhcC-CCE
Q 025145 171 -----------------------------------NLRNK---------------------IE--GSHEAARRAAS-LPI 191 (257)
Q Consensus 171 -----------------------------------~~~~~---------------------~~--~~~~~~~~~~~-~P~ 191 (257)
..... .. .........+. +|+
T Consensus 188 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pv 267 (326)
T KOG1454|consen 188 ELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPV 267 (326)
T ss_pred hhcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCce
Confidence 00000 00 11111233444 999
Q ss_pred EEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025145 192 LLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 192 l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
++++|+.|+++|.+.+..+.++++ ++++++++++||..+.+..+.+.+.|..++
T Consensus 268 lii~G~~D~~~p~~~~~~~~~~~p-----n~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi 321 (326)
T KOG1454|consen 268 LIIWGDKDQIVPLELAEELKKKLP-----NAELVEIPGAGHLPHLERPEEVAALLRSFI 321 (326)
T ss_pred EEEEcCcCCccCHHHHHHHHhhCC-----CceEEEeCCCCcccccCCHHHHHHHHHHHH
Confidence 999999999999998888888884 789999999999998666655555555544
No 39
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.88 E-value=4.4e-21 Score=157.57 Aligned_cols=186 Identities=13% Similarity=0.134 Sum_probs=125.4
Q ss_pred CCceEEEEEccCCCCccchHH-HhhcCC---CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHH
Q 025145 32 KHQATIVWLHGLGDNGSSWSQ-LLESLP---LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAA 107 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~-~~~~l~---~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 107 (257)
+.+++|||+||++++...|.. ++..|. ..+|+|+++|+||+|.+.... ....++.+.++
T Consensus 199 ~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~-----------------~~~ytl~~~a~ 261 (481)
T PLN03087 199 KAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPA-----------------DSLYTLREHLE 261 (481)
T ss_pred CCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCC-----------------CCcCCHHHHHH
Confidence 345799999999999988874 434443 368999999999876543211 01233455555
Q ss_pred HHH-HHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCC-Cch---------------
Q 025145 108 HIA-NLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLP-GSR--------------- 170 (257)
Q Consensus 108 ~~~-~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~--------------- 170 (257)
++. .+++.... +++.++||||||.+++.++.++ |+++++++++++... ...
T Consensus 262 ~l~~~ll~~lg~-~k~~LVGhSmGG~iAl~~A~~~-----------Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~ 329 (481)
T PLN03087 262 MIERSVLERYKV-KSFHIVAHSLGCILALALAVKH-----------PGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPR 329 (481)
T ss_pred HHHHHHHHHcCC-CCEEEEEECHHHHHHHHHHHhC-----------hHhccEEEEECCCccccccchhHHHHHHHHhccc
Confidence 553 45554433 3899999999999999999954 778888888764210 000
Q ss_pred -------------hhh----h--------------c---------ccc-----------chH------------------
Q 025145 171 -------------NLR----N--------------K---------IEG-----------SHE------------------ 181 (257)
Q Consensus 171 -------------~~~----~--------------~---------~~~-----------~~~------------------ 181 (257)
.+. . . ... ...
T Consensus 330 ~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~ 409 (481)
T PLN03087 330 RVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGY 409 (481)
T ss_pred ccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhH
Confidence 000 0 0 000 000
Q ss_pred --HHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCH-HHHHHHHHHHHHhcC
Q 025145 182 --AARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVP-KEMDEVCNWLTARLG 251 (257)
Q Consensus 182 --~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~-~~~~~~~~~l~~~l~ 251 (257)
.....+++|+|+++|++|.++|++.++.+.+.++ +.++++++++||.... +..+.+.+.|.++..
T Consensus 410 l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP-----~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~ 477 (481)
T PLN03087 410 LDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVP-----RARVKVIDDKDHITIVVGRQKEFARELEEIWR 477 (481)
T ss_pred HHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCC-----CCEEEEeCCCCCcchhhcCHHHHHHHHHHHhh
Confidence 0001468999999999999999999999999987 6799999999999663 555555555555543
No 40
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.88 E-value=5.5e-21 Score=146.48 Aligned_cols=181 Identities=22% Similarity=0.282 Sum_probs=122.4
Q ss_pred eEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHH-HHHHh
Q 025145 35 ATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAH-IANLL 113 (257)
Q Consensus 35 ~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 113 (257)
|+||++||++++...|..+++.|+ .+|.|+++|.|++|.+.... .....++.+.+.+ +..++
T Consensus 2 ~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~----------------~~~~~~~~~~~~~~~~~~~ 64 (251)
T TIGR03695 2 PVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPD----------------EIERYDFEEAAQDILATLL 64 (251)
T ss_pred CEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCC----------------ccChhhHHHHHHHHHHHHH
Confidence 689999999999999999999998 89999999999876442211 1123345555555 44444
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh----------------------
Q 025145 114 STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN---------------------- 171 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---------------------- 171 (257)
+... ..+++++|||+||.+++.++.+. +..+.+++++++.......
T Consensus 65 ~~~~-~~~~~l~G~S~Gg~ia~~~a~~~-----------~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (251)
T TIGR03695 65 DQLG-IEPFFLVGYSMGGRIALYYALQY-----------PERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGL 132 (251)
T ss_pred HHcC-CCeEEEEEeccHHHHHHHHHHhC-----------chheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCc
Confidence 4332 34899999999999999999954 6778888877653211100
Q ss_pred --hhh---------c---ccc-------------------------------chHHHhhhcCCCEEEEccCCCCcccchh
Q 025145 172 --LRN---------K---IEG-------------------------------SHEAARRAASLPILLTHGLCDDVVPYKY 206 (257)
Q Consensus 172 --~~~---------~---~~~-------------------------------~~~~~~~~~~~P~l~~~G~~D~~v~~~~ 206 (257)
+.. . ... ........+++|+++++|++|..++ +.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~ 211 (251)
T TIGR03695 133 EAFLDDWYQQPLFASQKNLPPEQRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QI 211 (251)
T ss_pred cHHHHHHhcCceeeecccCChHHhHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HH
Confidence 000 0 000 0001123578999999999998764 34
Q ss_pred hHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025145 207 GEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 207 ~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
.+.+.+.++ +.++++++++||.+..+..+.+.+.+.+++
T Consensus 212 ~~~~~~~~~-----~~~~~~~~~~gH~~~~e~~~~~~~~i~~~l 250 (251)
T TIGR03695 212 AKEMQKLLP-----NLTLVIIANAGHNIHLENPEAFAKILLAFL 250 (251)
T ss_pred HHHHHhcCC-----CCcEEEEcCCCCCcCccChHHHHHHHHHHh
Confidence 444544443 678999999999988766666666666554
No 41
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.87 E-value=1.3e-21 Score=138.05 Aligned_cols=145 Identities=24% Similarity=0.318 Sum_probs=110.7
Q ss_pred EEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhcc
Q 025145 36 TIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLST 115 (257)
Q Consensus 36 ~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (257)
+||++||++++...|..+++.|++.||.|+.+|.|+++.+ .....+.+.++.+. +.
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~---------------------~~~~~~~~~~~~~~---~~ 56 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDS---------------------DGADAVERVLADIR---AG 56 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTS---------------------HHSHHHHHHHHHHH---HH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCcc---------------------chhHHHHHHHHHHH---hh
Confidence 6899999999999999999999989999999998864321 01112233333332 11
Q ss_pred CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHHhhhcCCCEEEEc
Q 025145 116 EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTH 195 (257)
Q Consensus 116 ~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~ 195 (257)
..+.++++++|||+||.+++.++.+ .++++++++++++.. .......+.|+++++
T Consensus 57 ~~~~~~i~l~G~S~Gg~~a~~~~~~------------~~~v~~~v~~~~~~~-------------~~~~~~~~~pv~~i~ 111 (145)
T PF12695_consen 57 YPDPDRIILIGHSMGGAIAANLAAR------------NPRVKAVVLLSPYPD-------------SEDLAKIRIPVLFIH 111 (145)
T ss_dssp HCTCCEEEEEEETHHHHHHHHHHHH------------STTESEEEEESESSG-------------CHHHTTTTSEEEEEE
T ss_pred cCCCCcEEEEEEccCcHHHHHHhhh------------ccceeEEEEecCccc-------------hhhhhccCCcEEEEE
Confidence 1244599999999999999999984 378999999998411 122345678999999
Q ss_pred cCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCc
Q 025145 196 GLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHY 233 (257)
Q Consensus 196 G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~ 233 (257)
|++|..++.+..++++++++. +.++++++|++|+
T Consensus 112 g~~D~~~~~~~~~~~~~~~~~----~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 112 GENDPLVPPEQVRRLYEALPG----PKELYIIPGAGHF 145 (145)
T ss_dssp ETT-SSSHHHHHHHHHHHHCS----SEEEEEETTS-TT
T ss_pred ECCCCcCCHHHHHHHHHHcCC----CcEEEEeCCCcCc
Confidence 999999999999999999982 6799999999995
No 42
>PRK06489 hypothetical protein; Provisional
Probab=99.87 E-value=1e-20 Score=152.97 Aligned_cols=190 Identities=17% Similarity=0.097 Sum_probs=122.3
Q ss_pred ceEEEEEccCCCCccchH--HHhhcC-------CCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHH
Q 025145 34 QATIVWLHGLGDNGSSWS--QLLESL-------PLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDA 104 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~--~~~~~l-------~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 104 (257)
.|+|||+||++++...|. .+.+.| ...+|+|+++|+||||.+....... .......++.+
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~-----------~~~~~~~~~~~ 137 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGL-----------RAAFPRYDYDD 137 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCC-----------CCCCCcccHHH
Confidence 578999999999887775 444333 2368999999999987654221000 00001234455
Q ss_pred HHHHHHHHh-ccCCCCceE-EEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCC-CC--chh--------
Q 025145 105 SAAHIANLL-STEPADVKV-GIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWL-PG--SRN-------- 171 (257)
Q Consensus 105 ~~~~~~~~~-~~~~~~~~i-~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~--~~~-------- 171 (257)
.++++..++ ++.... ++ +|+||||||.+++.++.++ |++++++|++++.. .. ...
T Consensus 138 ~a~~~~~~l~~~lgi~-~~~~lvG~SmGG~vAl~~A~~~-----------P~~V~~LVLi~s~~~~~~~~~~~~~~~~~~ 205 (360)
T PRK06489 138 MVEAQYRLVTEGLGVK-HLRLILGTSMGGMHAWMWGEKY-----------PDFMDALMPMASQPTEMSGRNWMWRRMLIE 205 (360)
T ss_pred HHHHHHHHHHHhcCCC-ceeEEEEECHHHHHHHHHHHhC-----------chhhheeeeeccCcccccHHHHHHHHHHHH
Confidence 566655544 333333 66 4899999999999999964 88888888776531 00 000
Q ss_pred -hh--------h-------------c---------------ccc---------------------------------chH
Q 025145 172 -LR--------N-------------K---------------IEG---------------------------------SHE 181 (257)
Q Consensus 172 -~~--------~-------------~---------------~~~---------------------------------~~~ 181 (257)
.. . . ... ...
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 285 (360)
T PRK06489 206 SIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLYQWDSSRDYNPS 285 (360)
T ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHHHHHHhhccChH
Confidence 00 0 0 000 000
Q ss_pred HHhhhcCCCEEEEccCCCCcccchhh--HHHHHHhhhcCceeeEEEEecCC----CCccCHHHHHHHHHHHHHhcCc
Q 025145 182 AARRAASLPILLTHGLCDDVVPYKYG--EKSANCLSISGFRHLTFKSFEGL----GHYTVPKEMDEVCNWLTARLGL 252 (257)
Q Consensus 182 ~~~~~~~~P~l~~~G~~D~~v~~~~~--~~~~~~l~~~~~~~~~~~~~~g~----~H~~~~~~~~~~~~~l~~~l~~ 252 (257)
.....+++|+|+++|++|.++|.+.+ +.+.+.++ +.++++++++ ||..+ +..+.+.+.|.+++..
T Consensus 286 ~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip-----~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~~ 356 (360)
T PRK06489 286 PDLEKIKAPVLAINSADDERNPPETGVMEAALKRVK-----HGRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLAQ 356 (360)
T ss_pred HHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCc-----CCeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHHh
Confidence 12345789999999999999998875 67888776 6789999986 99987 5665555555555543
No 43
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.87 E-value=7e-21 Score=154.95 Aligned_cols=181 Identities=19% Similarity=0.252 Sum_probs=127.3
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025145 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
...++|||+||++++...|..+...|. .+|+|+++|+|++|.+.... ...++.+.+..+.+
T Consensus 129 ~~~~~vl~~HG~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~G~s~~~~------------------~~~~~~~~~~~~~~ 189 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNNWLFNHAALA-AGRPVIALDLPGHGASSKAV------------------GAGSLDELAAAVLA 189 (371)
T ss_pred CCCCeEEEECCCCCccchHHHHHHHHh-cCCEEEEEcCCCCCCCCCCC------------------CCCCHHHHHHHHHH
Confidence 446799999999999999999999987 45999999999876542111 12234556666666
Q ss_pred HhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch---hh----------------
Q 025145 112 LLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR---NL---------------- 172 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~---------------- 172 (257)
+++..... +++|+|||+||.+++.++.+. +.++.+++++++...... .+
T Consensus 190 ~~~~~~~~-~~~lvG~S~Gg~~a~~~a~~~-----------~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (371)
T PRK14875 190 FLDALGIE-RAHLVGHSMGGAVALRLAARA-----------PQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPV 257 (371)
T ss_pred HHHhcCCc-cEEEEeechHHHHHHHHHHhC-----------chheeEEEEECcCCcCcccchhHHHHhhcccchhHHHHH
Confidence 66654433 899999999999999999853 778899888876421100 00
Q ss_pred -----------hhc-----c-----c--------------------cchHHHhhhcCCCEEEEccCCCCcccchhhHHHH
Q 025145 173 -----------RNK-----I-----E--------------------GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSA 211 (257)
Q Consensus 173 -----------~~~-----~-----~--------------------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~ 211 (257)
... . . .........+++|+++++|++|.++|.+.++.+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l- 336 (371)
T PRK14875 258 LELLFADPALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGL- 336 (371)
T ss_pred HHHHhcChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhc-
Confidence 000 0 0 000012345789999999999999998765433
Q ss_pred HHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025145 212 NCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 212 ~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
.. ++++.+++++||.+..+..+.+.+.|.++++
T Consensus 337 ---~~----~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 369 (371)
T PRK14875 337 ---PD----GVAVHVLPGAGHMPQMEAAADVNRLLAEFLG 369 (371)
T ss_pred ---cC----CCeEEEeCCCCCChhhhCHHHHHHHHHHHhc
Confidence 21 4688999999999987777777777777664
No 44
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.87 E-value=1e-20 Score=143.92 Aligned_cols=190 Identities=20% Similarity=0.227 Sum_probs=134.3
Q ss_pred CCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHH
Q 025145 29 PKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAH 108 (257)
Q Consensus 29 ~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 108 (257)
......|+|+++||+.....+|+.+...|+..||+|+++|+||-|.+. .+.....+++...+.+
T Consensus 39 ~g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd----------------~P~~~~~Yt~~~l~~d 102 (322)
T KOG4178|consen 39 GGPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSD----------------APPHISEYTIDELVGD 102 (322)
T ss_pred ecCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCC----------------CCCCcceeeHHHHHHH
Confidence 344578999999999999999999999999999999999998644322 2233356677888888
Q ss_pred HHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc-------------------
Q 025145 109 IANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS------------------- 169 (257)
Q Consensus 109 ~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------------------- 169 (257)
+..+++..... +++++||+||+.+|+.++... |+++.+++.++...+..
T Consensus 103 i~~lld~Lg~~-k~~lvgHDwGaivaw~la~~~-----------Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~ 170 (322)
T KOG4178|consen 103 IVALLDHLGLK-KAFLVGHDWGAIVAWRLALFY-----------PERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYIC 170 (322)
T ss_pred HHHHHHHhccc-eeEEEeccchhHHHHHHHHhC-----------hhhcceEEEecCCCCCcccchhhhhccccCccceeE
Confidence 88888877644 999999999999999999954 88899888776532200
Q ss_pred --------hh-----------------------h-------------h----------------------hccccch---
Q 025145 170 --------RN-----------------------L-------------R----------------------NKIEGSH--- 180 (257)
Q Consensus 170 --------~~-----------------------~-------------~----------------------~~~~~~~--- 180 (257)
+. . . +.+.+..
T Consensus 171 ~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~ 250 (322)
T KOG4178|consen 171 LFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAA 250 (322)
T ss_pred eccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhc
Confidence 00 0 0 0000000
Q ss_pred HHHhhhcCCCEEEEccCCCCcccchh-hHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025145 181 EAARRAASLPILLTHGLCDDVVPYKY-GEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 181 ~~~~~~~~~P~l~~~G~~D~~v~~~~-~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
......+.+|+++++|+.|.+.+... ...+.+.++. -.+.++++|+||++++|..+.+.+.+.+++
T Consensus 251 ~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~----l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~ 317 (322)
T KOG4178|consen 251 PWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPR----LTERVVIEGIGHFVQQEKPQEVNQAILGFI 317 (322)
T ss_pred cccccccccceEEEEecCcccccchhHHHHHHHhhcc----ccceEEecCCcccccccCHHHHHHHHHHHH
Confidence 11234467999999999999998763 3334444432 237889999999999766555554444443
No 45
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.87 E-value=1.7e-20 Score=151.13 Aligned_cols=186 Identities=17% Similarity=0.118 Sum_probs=133.0
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025145 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
..++|||+||++++...|..++..|+ .+|+|+++|+||+|.+..... ......++.+.++++..+
T Consensus 126 ~~~~ivllHG~~~~~~~w~~~~~~L~-~~~~Via~DlpG~G~S~~p~~--------------~~~~~ys~~~~a~~l~~~ 190 (383)
T PLN03084 126 NNPPVLLIHGFPSQAYSYRKVLPVLS-KNYHAIAFDWLGFGFSDKPQP--------------GYGFNYTLDEYVSSLESL 190 (383)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHh-cCCEEEEECCCCCCCCCCCcc--------------cccccCCHHHHHHHHHHH
Confidence 46799999999999999999999997 589999999998875432210 001123556677777777
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc-----hh----------------
Q 025145 113 LSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS-----RN---------------- 171 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~---------------- 171 (257)
+++.... ++.|+|||+||.+++.++.+. |++++++|++++..... ..
T Consensus 191 i~~l~~~-~~~LvG~s~GG~ia~~~a~~~-----------P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~ 258 (383)
T PLN03084 191 IDELKSD-KVSLVVQGYFSPPVVKYASAH-----------PDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQD 258 (383)
T ss_pred HHHhCCC-CceEEEECHHHHHHHHHHHhC-----------hHhhcEEEEECCCCccccccchHHHHHHHHHHhhhhhhcc
Confidence 7765544 899999999999999999854 78888888887643210 00
Q ss_pred -hh---hc----------------ccc------c---h-----H-H---------Hh------hhcCCCEEEEccCCCCc
Q 025145 172 -LR---NK----------------IEG------S---H-----E-A---------AR------RAASLPILLTHGLCDDV 201 (257)
Q Consensus 172 -~~---~~----------------~~~------~---~-----~-~---------~~------~~~~~P~l~~~G~~D~~ 201 (257)
.. .. +.. . . . . .. ..+++|+++++|+.|.+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~ 338 (383)
T PLN03084 259 PLRASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRW 338 (383)
T ss_pred hHHHHhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCC
Confidence 00 00 000 0 0 0 0 00 13589999999999999
Q ss_pred ccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025145 202 VPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 202 v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
++.+.++.+.+.. +.++++++++||.++.|..+.+.+.|.+++.
T Consensus 339 v~~~~~~~~a~~~------~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 339 LNYDGVEDFCKSS------QHKLIELPMAGHHVQEDCGEELGGIISGILS 382 (383)
T ss_pred cCHHHHHHHHHhc------CCeEEEECCCCCCcchhCHHHHHHHHHHHhh
Confidence 9998877777753 4589999999999998887777777776654
No 46
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.86 E-value=1.2e-20 Score=150.39 Aligned_cols=196 Identities=18% Similarity=0.197 Sum_probs=120.6
Q ss_pred CCceEEEEEccCCCCcc-ch-------------------------HHHhhcCCCCceEEEccCCCCCCcccCCCCccccc
Q 025145 32 KHQATIVWLHGLGDNGS-SW-------------------------SQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAW 85 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~-~~-------------------------~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w 85 (257)
+++.+|+++||++++.. .| ..+++.|.+.||.|+++|+||||.+.....
T Consensus 19 ~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~rGHG~S~~~~~----- 93 (332)
T TIGR01607 19 NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQGHGESDGLQN----- 93 (332)
T ss_pred CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecccccCCCccccc-----
Confidence 57789999999999986 21 357889988999999999999875442210
Q ss_pred ccCCCCCCCCCCchhhHHHHHHHHHHHhcc----------------------CCC-CceEEEEEechhHHHHHHHHHhcc
Q 025145 86 FDVGELSDDGPEDWEGLDASAAHIANLLST----------------------EPA-DVKVGIGGFSMGAAVALYSATCCA 142 (257)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~-~~~i~l~G~S~Gg~~a~~~~~~~~ 142 (257)
......++.+.++++..+++. ... ..+++|+||||||.+++.++.+.+
T Consensus 94 ---------~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~ 164 (332)
T TIGR01607 94 ---------LRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLG 164 (332)
T ss_pred ---------cccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhc
Confidence 000012333333333333321 122 348999999999999999886431
Q ss_pred ccCCCCCCCcccccceEEEeccCCCCch-----------h---h--------------h-hccccc--------------
Q 025145 143 LGRYGNGIPYYVNLRAVVGLSGWLPGSR-----------N---L--------------R-NKIEGS-------------- 179 (257)
Q Consensus 143 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----------~---~--------------~-~~~~~~-------------- 179 (257)
.... ......++++|+++|.+.... . + . ..+...
T Consensus 165 ~~~~---~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~Dp~~~ 241 (332)
T TIGR01607 165 KSNE---NNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYEKSPYVNDIIKFDKFRY 241 (332)
T ss_pred cccc---cccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccccChhhhhHHhcCcccc
Confidence 1000 000124777776665421000 0 0 0 000000
Q ss_pred ----------------h--HHHhhhc--CCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHH--
Q 025145 180 ----------------H--EAARRAA--SLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPK-- 237 (257)
Q Consensus 180 ----------------~--~~~~~~~--~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~-- 237 (257)
. ......+ ++|+|+++|++|.+++++.++.+++++... +++++++++++|.+..+
T Consensus 242 ~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~---~~~l~~~~g~~H~i~~E~~ 318 (332)
T TIGR01607 242 DGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSIS---NKELHTLEDMDHVITIEPG 318 (332)
T ss_pred CCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCC---CcEEEEECCCCCCCccCCC
Confidence 0 0011223 689999999999999999988888877543 57899999999998743
Q ss_pred ---HHHHHHHHHH
Q 025145 238 ---EMDEVCNWLT 247 (257)
Q Consensus 238 ---~~~~~~~~l~ 247 (257)
..+.+.+||.
T Consensus 319 ~~~v~~~i~~wL~ 331 (332)
T TIGR01607 319 NEEVLKKIIEWIS 331 (332)
T ss_pred HHHHHHHHHHHhh
Confidence 3456666663
No 47
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.86 E-value=3.2e-21 Score=144.84 Aligned_cols=181 Identities=20% Similarity=0.207 Sum_probs=124.4
Q ss_pred hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhccC-CCCceEEEEEec
Q 025145 50 WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTE-PADVKVGIGGFS 128 (257)
Q Consensus 50 ~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~G~S 128 (257)
|......|+.+||.|+.+|.||.+ |++ ..|.... ........+.+.+..+..++++. .+.++|+++|+|
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~-----g~g-~~~~~~~----~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S 72 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSG-----GYG-KDFHEAG----RGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHS 72 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSS-----SSH-HHHHHTT----TTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEET
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCC-----ccc-hhHHHhh----hccccccchhhHHHHHHHHhccccccceeEEEEccc
Confidence 345567777899999999988542 211 1222111 11222345566666666665554 344699999999
Q ss_pred hhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhc-------c---cc---c--------hHHHhhh-
Q 025145 129 MGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNK-------I---EG---S--------HEAARRA- 186 (257)
Q Consensus 129 ~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-------~---~~---~--------~~~~~~~- 186 (257)
+||++++.++.+. ++.++++++.+|........... . .. . +......
T Consensus 73 ~GG~~a~~~~~~~-----------~~~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 141 (213)
T PF00326_consen 73 YGGYLALLAATQH-----------PDRFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDNPEFYRELSPISPADNV 141 (213)
T ss_dssp HHHHHHHHHHHHT-----------CCGSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSSTTTSHHHHHHHHHGGGGGGC
T ss_pred ccccccchhhccc-----------ceeeeeeeccceecchhcccccccccccccccccCccchhhhhhhhhccccccccc
Confidence 9999999999853 88999999999876543222111 0 00 0 1112334
Q ss_pred -cCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC-----HHHHHHHHHHHHHhcCc
Q 025145 187 -ASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV-----PKEMDEVCNWLTARLGL 252 (257)
Q Consensus 187 -~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-----~~~~~~~~~~l~~~l~~ 252 (257)
.++|+|++||++|..||++++.++++.|++.+. +++++++|+++|.+. .+..+++.+||.+.|+.
T Consensus 142 ~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~-~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l~~ 212 (213)
T PF00326_consen 142 QIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGK-PVELLIFPGEGHGFGNPENRRDWYERILDFFDKYLKK 212 (213)
T ss_dssp GGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTS-SEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHTT-
T ss_pred cCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCC-CEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHcCC
Confidence 789999999999999999999999999999998 799999999999776 34568899999998863
No 48
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.86 E-value=3.5e-20 Score=145.19 Aligned_cols=185 Identities=15% Similarity=0.061 Sum_probs=120.7
Q ss_pred CceEEEEEccCCCCccc-hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025145 33 HQATIVWLHGLGDNGSS-WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~-~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
.+++|||+||+.++... |..+...+...||.|+++|.||+|.+..... .....++.+.++++..
T Consensus 24 ~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~---------------~~~~~~~~~~~~~~~~ 88 (288)
T TIGR01250 24 EKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDD---------------SDELWTIDYFVDELEE 88 (288)
T ss_pred CCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCc---------------ccccccHHHHHHHHHH
Confidence 35789999997655544 4555566654589999999998765432110 0001344555566666
Q ss_pred HhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhh------------------h
Q 025145 112 LLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNL------------------R 173 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~------------------~ 173 (257)
+++..... +++++||||||.+++.++.+. |.++.+++++++........ .
T Consensus 89 ~~~~~~~~-~~~liG~S~Gg~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (288)
T TIGR01250 89 VREKLGLD-KFYLLGHSWGGMLAQEYALKY-----------GQHLKGLIISSMLDSAPEYVKELNRLRKELPPEVRAAIK 156 (288)
T ss_pred HHHHcCCC-cEEEEEeehHHHHHHHHHHhC-----------ccccceeeEecccccchHHHHHHHHHHhhcChhHHHHHH
Confidence 66554333 799999999999999999854 77888888776532211000 0
Q ss_pred ------------------hcc-------cc-----------------------------------chHHHhhhcCCCEEE
Q 025145 174 ------------------NKI-------EG-----------------------------------SHEAARRAASLPILL 193 (257)
Q Consensus 174 ------------------~~~-------~~-----------------------------------~~~~~~~~~~~P~l~ 193 (257)
... .. ........+++|+++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~li 236 (288)
T TIGR01250 157 RCEASGDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLL 236 (288)
T ss_pred HHHhccCcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEE
Confidence 000 00 000122356899999
Q ss_pred EccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025145 194 THGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 194 ~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
++|++|.+ +++..+.+.+.++ +.++++++++||....+..+.+.+-|.+++
T Consensus 237 i~G~~D~~-~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 287 (288)
T TIGR01250 237 TVGEFDTM-TPEAAREMQELIA-----GSRLVVFPDGSHMTMIEDPEVYFKLLSDFI 287 (288)
T ss_pred EecCCCcc-CHHHHHHHHHhcc-----CCeEEEeCCCCCCcccCCHHHHHHHHHHHh
Confidence 99999985 5567777777765 568999999999988666666666555544
No 49
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.86 E-value=3.7e-20 Score=141.44 Aligned_cols=189 Identities=13% Similarity=0.100 Sum_probs=127.8
Q ss_pred CCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHH
Q 025145 29 PKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAH 108 (257)
Q Consensus 29 ~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 108 (257)
.....+.++|++||+|.....|..-++.|+ ....|+++|+||-|.+..+. |+. +....-...++.
T Consensus 85 ~~~~~~~plVliHGyGAg~g~f~~Nf~~La-~~~~vyaiDllG~G~SSRP~------F~~--------d~~~~e~~fves 149 (365)
T KOG4409|consen 85 NESANKTPLVLIHGYGAGLGLFFRNFDDLA-KIRNVYAIDLLGFGRSSRPK------FSI--------DPTTAEKEFVES 149 (365)
T ss_pred ccccCCCcEEEEeccchhHHHHHHhhhhhh-hcCceEEecccCCCCCCCCC------CCC--------CcccchHHHHHH
Confidence 333566799999999999999999899998 49999999999765443322 111 111222355666
Q ss_pred HHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh-------------h---
Q 025145 109 IANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN-------------L--- 172 (257)
Q Consensus 109 ~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-------------~--- 172 (257)
++++-...... +..|+|||+||+++..+|. +||++|..+|+++|+--..+. .
T Consensus 150 iE~WR~~~~L~-KmilvGHSfGGYLaa~YAl-----------KyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~ 217 (365)
T KOG4409|consen 150 IEQWRKKMGLE-KMILVGHSFGGYLAAKYAL-----------KYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKAL 217 (365)
T ss_pred HHHHHHHcCCc-ceeEeeccchHHHHHHHHH-----------hChHhhceEEEecccccccCCCcchhhcCCChHHHhhh
Confidence 66666655544 9999999999999999999 569999999999986221110 0
Q ss_pred ---------------------------------------hhcc-----------------------------ccch--HH
Q 025145 173 ---------------------------------------RNKI-----------------------------EGSH--EA 182 (257)
Q Consensus 173 ---------------------------------------~~~~-----------------------------~~~~--~~ 182 (257)
.+.+ +... ..
T Consensus 218 ~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~ 297 (365)
T KOG4409|consen 218 FLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRL 297 (365)
T ss_pred hhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHH
Confidence 0000 0000 00
Q ss_pred HhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHH
Q 025145 183 ARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTA 248 (257)
Q Consensus 183 ~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~ 248 (257)
......+|+++|+|++|.. +...+.++.+.+... .++.+++|++||.+..+..+...+-+.+
T Consensus 298 ~~l~~~~pv~fiyG~~dWm-D~~~g~~~~~~~~~~---~~~~~~v~~aGHhvylDnp~~Fn~~v~~ 359 (365)
T KOG4409|consen 298 RELKKDVPVTFIYGDRDWM-DKNAGLEVTKSLMKE---YVEIIIVPGAGHHVYLDNPEFFNQIVLE 359 (365)
T ss_pred HhhccCCCEEEEecCcccc-cchhHHHHHHHhhcc---cceEEEecCCCceeecCCHHHHHHHHHH
Confidence 1223469999999999975 555666677765433 6899999999999885555444444433
No 50
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.85 E-value=2.9e-20 Score=136.70 Aligned_cols=194 Identities=19% Similarity=0.219 Sum_probs=141.2
Q ss_pred eEEeCCCCCCceEEEEEccCCCCccchHHHhhcCC-CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhH
Q 025145 24 THVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLP-LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGL 102 (257)
Q Consensus 24 ~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~-~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~ 102 (257)
..++.+.....+++||.||...+......+...|. .-+++++.+|+.|- +.+.|. ..+...
T Consensus 50 ~~y~~~~~~~~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGy--G~S~G~----------------psE~n~ 111 (258)
T KOG1552|consen 50 CMYVRPPEAAHPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGY--GRSSGK----------------PSERNL 111 (258)
T ss_pred EEEEcCccccceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccc--cccCCC----------------cccccc
Confidence 34445555567899999998776665544555554 25899999997643 232221 112244
Q ss_pred HHHHHHHHHHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccc----
Q 025145 103 DASAAHIANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIE---- 177 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---- 177 (257)
.++++++.+++++.. .+++|+|+|+|+|...++.+|.+. + ++++|+.+|++...+.+.....
T Consensus 112 y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~-----------~--~~alVL~SPf~S~~rv~~~~~~~~~~ 178 (258)
T KOG1552|consen 112 YADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRY-----------P--LAAVVLHSPFTSGMRVAFPDTKTTYC 178 (258)
T ss_pred hhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcC-----------C--cceEEEeccchhhhhhhccCcceEEe
Confidence 555666677777655 456999999999999999999963 4 9999999998765554433111
Q ss_pred --c-chHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC---HHHHHHHHHHHHHhcC
Q 025145 178 --G-SHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV---PKEMDEVCNWLTARLG 251 (257)
Q Consensus 178 --~-~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~---~~~~~~~~~~l~~~l~ 251 (257)
. ......+.+++|+|++||++|++++..++.++++..+. .++..++.|+||... ++.++.+.+|+.....
T Consensus 179 ~d~f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~----~~epl~v~g~gH~~~~~~~~yi~~l~~f~~~~~~ 254 (258)
T KOG1552|consen 179 FDAFPNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKE----KVEPLWVKGAGHNDIELYPEYIEHLRRFISSVLP 254 (258)
T ss_pred eccccccCcceeccCCEEEEecccCceecccccHHHHHhccc----cCCCcEEecCCCcccccCHHHHHHHHHHHHHhcc
Confidence 1 11334567889999999999999999999999999985 468889999999765 6788889999887655
Q ss_pred c
Q 025145 252 L 252 (257)
Q Consensus 252 ~ 252 (257)
.
T Consensus 255 ~ 255 (258)
T KOG1552|consen 255 S 255 (258)
T ss_pred c
Confidence 4
No 51
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.85 E-value=2.2e-20 Score=150.11 Aligned_cols=194 Identities=20% Similarity=0.160 Sum_probs=125.1
Q ss_pred eEEeCCCCCCceEEEEEccCCCCcc------------chHHHhh---cCCCCceEEEccCCCCCCcccCCCCcccccccC
Q 025145 24 THVVRPKGKHQATIVWLHGLGDNGS------------SWSQLLE---SLPLPNIKWICPTAPTRPVAILGGFPCTAWFDV 88 (257)
Q Consensus 24 ~~~~~~~~~~~~~vi~~HG~~~~~~------------~~~~~~~---~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~ 88 (257)
.+.|...++..+++||+||+.++.. .|..++. .|...+|+|+++|+||+|.+..
T Consensus 47 ~l~y~~~G~~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~----------- 115 (343)
T PRK08775 47 RLRYELIGPAGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLD----------- 115 (343)
T ss_pred eEEEEEeccCCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCC-----------
Confidence 3444444432334666666555544 5887776 5644689999999997653210
Q ss_pred CCCCCCCCCchhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCC
Q 025145 89 GELSDDGPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPG 168 (257)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 168 (257)
. ...+.+.++++.++++.......++|+||||||.+++.++.++ |+++.++|++++....
T Consensus 116 ------~---~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~-----------P~~V~~LvLi~s~~~~ 175 (343)
T PRK08775 116 ------V---PIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRH-----------PARVRTLVVVSGAHRA 175 (343)
T ss_pred ------C---CCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHC-----------hHhhheEEEECccccC
Confidence 0 1223556777777777665442458999999999999999964 7888888887653210
Q ss_pred ch----------h-------------------------------hhhccccc------------h---------------
Q 025145 169 SR----------N-------------------------------LRNKIEGS------------H--------------- 180 (257)
Q Consensus 169 ~~----------~-------------------------------~~~~~~~~------------~--------------- 180 (257)
.. . +...+... .
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 255 (343)
T PRK08775 176 HPYAAAWRALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTP 255 (343)
T ss_pred CHHHHHHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcC
Confidence 00 0 00000000 0
Q ss_pred --------------HHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecC-CCCccCHHHHHHHHHH
Q 025145 181 --------------EAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEG-LGHYTVPKEMDEVCNW 245 (257)
Q Consensus 181 --------------~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g-~~H~~~~~~~~~~~~~ 245 (257)
......+++|+|+++|+.|.++|++.++.+.+.+.. +.+++++++ +||....|..+.+.+-
T Consensus 256 ~~~~~~~~~~~~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p----~a~l~~i~~~aGH~~~lE~Pe~~~~~ 331 (343)
T PRK08775 256 VNAYLRLSESIDLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGP----RGSLRVLRSPYGHDAFLKETDRIDAI 331 (343)
T ss_pred hhHHHHHHHHHhhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCC----CCeEEEEeCCccHHHHhcCHHHHHHH
Confidence 001235678999999999999999888888888742 568999985 8999986666666655
Q ss_pred HHHhcCc
Q 025145 246 LTARLGL 252 (257)
Q Consensus 246 l~~~l~~ 252 (257)
|.+++..
T Consensus 332 l~~FL~~ 338 (343)
T PRK08775 332 LTTALRS 338 (343)
T ss_pred HHHHHHh
Confidence 5555543
No 52
>PRK11071 esterase YqiA; Provisional
Probab=99.85 E-value=2e-20 Score=137.24 Aligned_cols=161 Identities=21% Similarity=0.274 Sum_probs=108.4
Q ss_pred eEEEEEccCCCCccchHH--HhhcCCC--CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHH
Q 025145 35 ATIVWLHGLGDNGSSWSQ--LLESLPL--PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIA 110 (257)
Q Consensus 35 ~~vi~~HG~~~~~~~~~~--~~~~l~~--~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (257)
|+|||+||++++...|.. +...+.. .++.|+++|+|+++ .+..+.+.
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-----------------------------~~~~~~l~ 52 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP-----------------------------ADAAELLE 52 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH-----------------------------HHHHHHHH
Confidence 579999999999999874 3454432 47999999988421 23455566
Q ss_pred HHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhc------------ccc
Q 025145 111 NLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNK------------IEG 178 (257)
Q Consensus 111 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~------------~~~ 178 (257)
+++++.... +++++|+||||.+++.++.+. +. .++++++.....+.+... +..
T Consensus 53 ~l~~~~~~~-~~~lvG~S~Gg~~a~~~a~~~-----------~~---~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (190)
T PRK11071 53 SLVLEHGGD-PLGLVGSSLGGYYATWLSQCF-----------ML---PAVVVNPAVRPFELLTDYLGENENPYTGQQYVL 117 (190)
T ss_pred HHHHHcCCC-CeEEEEECHHHHHHHHHHHHc-----------CC---CEEEECCCCCHHHHHHHhcCCcccccCCCcEEE
Confidence 666654443 899999999999999999953 42 245666644321111100 000
Q ss_pred -------chHHH--hhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC--HHHHHHHHHHHH
Q 025145 179 -------SHEAA--RRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV--PKEMDEVCNWLT 247 (257)
Q Consensus 179 -------~~~~~--~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l~ 247 (257)
..... ......|++++||++|++||++.+.++++.. +.++++|++|.+. .+..+.+.+|+.
T Consensus 118 ~~~~~~d~~~~~~~~i~~~~~v~iihg~~De~V~~~~a~~~~~~~--------~~~~~~ggdH~f~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 118 ESRHIYDLKVMQIDPLESPDLIWLLQQTGDEVLDYRQAVAYYAAC--------RQTVEEGGNHAFVGFERYFNQIVDFLG 189 (190)
T ss_pred cHHHHHHHHhcCCccCCChhhEEEEEeCCCCcCCHHHHHHHHHhc--------ceEEECCCCcchhhHHHhHHHHHHHhc
Confidence 00000 1125678899999999999999999888843 4557799999986 345677777764
No 53
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.84 E-value=2.9e-19 Score=134.91 Aligned_cols=207 Identities=19% Similarity=0.181 Sum_probs=145.5
Q ss_pred CCCCceEEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCc
Q 025145 19 FEFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPED 98 (257)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~ 98 (257)
..+...+..+....+.|.||++|++.+-....+.+++.|+..||.|++||+-.+......-.......... ......
T Consensus 12 ~~~~~~~a~P~~~~~~P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~---~~~~~~ 88 (236)
T COG0412 12 GELPAYLARPAGAGGFPGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETG---LVERVD 88 (236)
T ss_pred ceEeEEEecCCcCCCCCEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhh---hhccCC
Confidence 34444444444444559999999999999999999999999999999999654321111100000001000 001111
Q ss_pred hhhHHHHHHHHHHHhccCC--CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhcc
Q 025145 99 WEGLDASAAHIANLLSTEP--ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKI 176 (257)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 176 (257)
......++....+++.... ...+|+++|+||||.+++.++.+ .+.+++.+++.|.........
T Consensus 89 ~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~------------~~~v~a~v~fyg~~~~~~~~~--- 153 (236)
T COG0412 89 PAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATR------------APEVKAAVAFYGGLIADDTAD--- 153 (236)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcc------------cCCccEEEEecCCCCCCcccc---
Confidence 2344444555555665443 34589999999999999999984 238999999988665433222
Q ss_pred ccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCH---------------HHHHH
Q 025145 177 EGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVP---------------KEMDE 241 (257)
Q Consensus 177 ~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~---------------~~~~~ 241 (257)
...+++|+++.+|+.|..+|.+....+.+.+.++++ ++++.+|+++.|.+.. +.+++
T Consensus 154 -------~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~-~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~ 225 (236)
T COG0412 154 -------APKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGV-KVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQR 225 (236)
T ss_pred -------cccccCcEEEEecccCCCCChhHHHHHHHHHHhcCC-CeeEEEeCCCccccccCCCcccccCCHHHHHHHHHH
Confidence 346799999999999999999999999999998875 7899999999898762 24788
Q ss_pred HHHHHHHhcC
Q 025145 242 VCNWLTARLG 251 (257)
Q Consensus 242 ~~~~l~~~l~ 251 (257)
+.+|+++.+.
T Consensus 226 ~~~ff~~~~~ 235 (236)
T COG0412 226 VLAFFKRLLG 235 (236)
T ss_pred HHHHHHHhcc
Confidence 9999988764
No 54
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.84 E-value=2.6e-19 Score=146.15 Aligned_cols=191 Identities=12% Similarity=0.041 Sum_probs=122.6
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025145 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
...|+|||+||++++...|...+..|+ .+|+|+++|+||+|.+.... +.. ..........++.+.+
T Consensus 103 ~~~p~vvllHG~~~~~~~~~~~~~~L~-~~~~vi~~D~rG~G~S~~~~------~~~-------~~~~~~~~~~~~~i~~ 168 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGFFFRNFDALA-SRFRVIAIDQLGWGGSSRPD------FTC-------KSTEETEAWFIDSFEE 168 (402)
T ss_pred CCCCEEEEECCCCcchhHHHHHHHHHH-hCCEEEEECCCCCCCCCCCC------ccc-------ccHHHHHHHHHHHHHH
Confidence 456899999999999888888888887 46999999999887543211 000 0001111223445555
Q ss_pred HhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc--hh------------------
Q 025145 112 LLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS--RN------------------ 171 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~------------------ 171 (257)
+++..... +++|+||||||.+++.++.+. +.+++++|++++..... ..
T Consensus 169 ~~~~l~~~-~~~lvGhS~GG~la~~~a~~~-----------p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (402)
T PLN02894 169 WRKAKNLS-NFILLGHSFGGYVAAKYALKH-----------PEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLN 236 (402)
T ss_pred HHHHcCCC-CeEEEEECHHHHHHHHHHHhC-----------chhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHH
Confidence 55544333 899999999999999999964 67777777665431000 00
Q ss_pred ---------------------------hhhc---------c------------------------------------ccc
Q 025145 172 ---------------------------LRNK---------I------------------------------------EGS 179 (257)
Q Consensus 172 ---------------------------~~~~---------~------------------------------------~~~ 179 (257)
.... + ...
T Consensus 237 ~~~~~~~~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (402)
T PLN02894 237 HLWESNFTPQKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKP 316 (402)
T ss_pred HHhhcCCCHHHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcch
Confidence 0000 0 000
Q ss_pred hHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHH----HHHHHHHHHHHhcCcC
Q 025145 180 HEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPK----EMDEVCNWLTARLGLE 253 (257)
Q Consensus 180 ~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~----~~~~~~~~l~~~l~~~ 253 (257)
.......+++|+++++|++|.+.+ .....+.+.+.. .+++++++++||....| ..+.+.+|++.++...
T Consensus 317 ~~~~l~~I~vP~liI~G~~D~i~~-~~~~~~~~~~~~----~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~~~~ 389 (402)
T PLN02894 317 LLESASEWKVPTTFIYGRHDWMNY-EGAVEARKRMKV----PCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYLSPD 389 (402)
T ss_pred HhhhcccCCCCEEEEEeCCCCCCc-HHHHHHHHHcCC----CCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhccCC
Confidence 001124468999999999998765 555555555421 46899999999998744 3456777777777654
No 55
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.84 E-value=3.5e-19 Score=141.04 Aligned_cols=183 Identities=16% Similarity=0.103 Sum_probs=120.7
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025145 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
.++|||+||+.++...+ .+...+...+|+|+++|+||+|.+..... .......+.+.++..++
T Consensus 27 ~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~----------------~~~~~~~~~~~dl~~l~ 89 (306)
T TIGR01249 27 GKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHAC----------------LEENTTWDLVADIEKLR 89 (306)
T ss_pred CCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCC----------------cccCCHHHHHHHHHHHH
Confidence 56799999987776543 34445545689999999998875432110 00112334455555555
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc------------------------
Q 025145 114 STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS------------------------ 169 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------------------------ 169 (257)
+..... +++++||||||.+++.++.+. +++++++|+++.+....
T Consensus 90 ~~l~~~-~~~lvG~S~GG~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (306)
T TIGR01249 90 EKLGIK-NWLVFGGSWGSTLALAYAQTH-----------PEVVTGLVLRGIFLLREKEWSWFYEGGASMIYPDAWQRFMD 157 (306)
T ss_pred HHcCCC-CEEEEEECHHHHHHHHHHHHC-----------hHhhhhheeeccccCCHHHHHHHHhcchhhhCHHHHHHHhh
Confidence 544333 899999999999999999854 66666666654322100
Q ss_pred ---hhhh-------------------------------h-ccccc-----------------hH----------------
Q 025145 170 ---RNLR-------------------------------N-KIEGS-----------------HE---------------- 181 (257)
Q Consensus 170 ---~~~~-------------------------------~-~~~~~-----------------~~---------------- 181 (257)
.... . ..... ..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (306)
T TIGR01249 158 SIPENERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFVNKGFLDVEN 237 (306)
T ss_pred hCChhhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHHHhchhcCch
Confidence 0000 0 00000 00
Q ss_pred ---HHhhhc-CCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC-HHHHHHHHHHHHHhc
Q 025145 182 ---AARRAA-SLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV-PKEMDEVCNWLTARL 250 (257)
Q Consensus 182 ---~~~~~~-~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~~l~~~l 250 (257)
.....+ ++|+++++|++|.++|.+.++.+++.++ +.++++++++||... ++..+.+.+|+.++|
T Consensus 238 ~~~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~i~~~~~~~~ 306 (306)
T TIGR01249 238 FILDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFP-----EAELKVTNNAGHSAFDPNNLAALVHALETYL 306 (306)
T ss_pred HHHHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhCC-----CCEEEEECCCCCCCCChHHHHHHHHHHHHhC
Confidence 011223 5899999999999999999999998886 568999999999986 567889999998764
No 56
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.84 E-value=2.1e-19 Score=144.91 Aligned_cols=199 Identities=18% Similarity=0.152 Sum_probs=126.8
Q ss_pred CceEEEEEccCCCCcc-----------chHHHh---hcCCCCceEEEccCCCCC--CcccCCCCcccccccCCCCCCCCC
Q 025145 33 HQATIVWLHGLGDNGS-----------SWSQLL---ESLPLPNIKWICPTAPTR--PVAILGGFPCTAWFDVGELSDDGP 96 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~-----------~~~~~~---~~l~~~g~~v~~~d~~~~--g~~~~~g~~~~~w~~~~~~~~~~~ 96 (257)
..++|||+||++++.. .|..++ +.|...+|.|+++|+||+ |.+.... |.. .+......
T Consensus 30 ~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~-----~~~-~~~~~~~~ 103 (351)
T TIGR01392 30 RSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSS-----INP-GGRPYGSD 103 (351)
T ss_pred CCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCC-----CCC-CCCcCCCC
Confidence 3579999999999762 366664 355568999999999984 3321100 000 00000001
Q ss_pred CchhhHHHHHHHHHHHhccCCCCce-EEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch-----
Q 025145 97 EDWEGLDASAAHIANLLSTEPADVK-VGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR----- 170 (257)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~-i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----- 170 (257)
.....+.+.++++..++++.... + ++|+||||||.+++.++.++ |++++++|++++......
T Consensus 104 ~~~~~~~~~~~~~~~~~~~l~~~-~~~~l~G~S~Gg~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~ 171 (351)
T TIGR01392 104 FPLITIRDDVKAQKLLLDHLGIE-QIAAVVGGSMGGMQALEWAIDY-----------PERVRAIVVLATSARHSAWCIAF 171 (351)
T ss_pred CCCCcHHHHHHHHHHHHHHcCCC-CceEEEEECHHHHHHHHHHHHC-----------hHhhheEEEEccCCcCCHHHHHH
Confidence 11345667777777777766444 6 99999999999999999964 777777777655321000
Q ss_pred ------h---------------------h-----------------hhccc-----------------------------
Q 025145 171 ------N---------------------L-----------------RNKIE----------------------------- 177 (257)
Q Consensus 171 ------~---------------------~-----------------~~~~~----------------------------- 177 (257)
. + ...+.
T Consensus 172 ~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (351)
T TIGR01392 172 NEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGDK 251 (351)
T ss_pred HHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHHH
Confidence 0 0 00000
Q ss_pred ------c---------c-----------hHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEE-EecCC
Q 025145 178 ------G---------S-----------HEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFK-SFEGL 230 (257)
Q Consensus 178 ------~---------~-----------~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~-~~~g~ 230 (257)
. . .......+++|+|+++|++|.++|++.++.+.+.++.... .++++ +++++
T Consensus 252 ~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~-~v~~~~i~~~~ 330 (351)
T TIGR01392 252 FVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPAAGL-RVTYVEIESPY 330 (351)
T ss_pred HHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCC-ceEEEEeCCCC
Confidence 0 0 0112335678999999999999999999999999985422 22333 44689
Q ss_pred CCccCHHHHHHHHHHHHHhc
Q 025145 231 GHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 231 ~H~~~~~~~~~~~~~l~~~l 250 (257)
||..+.+..+.+.+.|.+++
T Consensus 331 GH~~~le~p~~~~~~l~~FL 350 (351)
T TIGR01392 331 GHDAFLVETDQVEELIRGFL 350 (351)
T ss_pred CcchhhcCHHHHHHHHHHHh
Confidence 99998777777766666654
No 57
>PRK07581 hypothetical protein; Validated
Probab=99.83 E-value=3.5e-19 Score=143.13 Aligned_cols=194 Identities=13% Similarity=0.045 Sum_probs=120.0
Q ss_pred CceEEEEEccCCCCccchHHHh---hcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025145 33 HQATIVWLHGLGDNGSSWSQLL---ESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~---~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
..|+||+.||++++...|..++ ..|...+|+|+++|+||+|.+......... +... ......+.+++...
T Consensus 40 ~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~-~~~~------~~~~~~~~~~~~~~ 112 (339)
T PRK07581 40 KDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAP-FNAA------RFPHVTIYDNVRAQ 112 (339)
T ss_pred CCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCC-CCCC------CCCceeHHHHHHHH
Confidence 3467888888887776665543 466557899999999998765432110000 0000 00112234444443
Q ss_pred HH-HhccCCCCce-EEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch-----------------
Q 025145 110 AN-LLSTEPADVK-VGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR----------------- 170 (257)
Q Consensus 110 ~~-~~~~~~~~~~-i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----------------- 170 (257)
.. +++..... + ++|+||||||.+++.++.++ |++++++|++++......
T Consensus 113 ~~~l~~~lgi~-~~~~lvG~S~GG~va~~~a~~~-----------P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~ 180 (339)
T PRK07581 113 HRLLTEKFGIE-RLALVVGWSMGAQQTYHWAVRY-----------PDMVERAAPIAGTAKTTPHNFVFLEGLKAALTADP 180 (339)
T ss_pred HHHHHHHhCCC-ceEEEEEeCHHHHHHHHHHHHC-----------HHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCC
Confidence 33 33334333 7 57999999999999999965 788888887744221000
Q ss_pred --------------------hh----------h-------------h----c---c-c--c-------------------
Q 025145 171 --------------------NL----------R-------------N----K---I-E--G------------------- 178 (257)
Q Consensus 171 --------------------~~----------~-------------~----~---~-~--~------------------- 178 (257)
.. . . . . . .
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 260 (339)
T PRK07581 181 AFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRN 260 (339)
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccC
Confidence 00 0 0 0 0 0 0
Q ss_pred -----chHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecC-CCCccCHHH----HHHHHHHHHH
Q 025145 179 -----SHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEG-LGHYTVPKE----MDEVCNWLTA 248 (257)
Q Consensus 179 -----~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g-~~H~~~~~~----~~~~~~~l~~ 248 (257)
........+++|+|+++|++|.++|++.++.+.+.++ +.+++++++ +||....+. ...+.+|+.+
T Consensus 261 ~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip-----~a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~ 335 (339)
T PRK07581 261 PAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIP-----NAELRPIESIWGHLAGFGQNPADIAFIDAALKE 335 (339)
T ss_pred cccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCC-----CCeEEEeCCCCCccccccCcHHHHHHHHHHHHH
Confidence 0011223468999999999999999999888888886 668999998 899877444 4555556655
Q ss_pred hc
Q 025145 249 RL 250 (257)
Q Consensus 249 ~l 250 (257)
++
T Consensus 336 ~~ 337 (339)
T PRK07581 336 LL 337 (339)
T ss_pred HH
Confidence 54
No 58
>PLN02511 hydrolase
Probab=99.83 E-value=2.1e-19 Score=146.13 Aligned_cols=191 Identities=12% Similarity=0.115 Sum_probs=120.1
Q ss_pred CCceEEEEEccCCCCccc-h-HHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025145 32 KHQATIVWLHGLGDNGSS-W-SQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~-~-~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
...|+||++||++++... | ..++..+...||+|+++|+||+|.+.... ..++ .....+++..+
T Consensus 98 ~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~---~~~~------------~~~~~~Dl~~~ 162 (388)
T PLN02511 98 ADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTT---PQFY------------SASFTGDLRQV 162 (388)
T ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCC---cCEE------------cCCchHHHHHH
Confidence 456899999999776654 5 44666555689999999999887543211 0111 11112333444
Q ss_pred HHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccc--cceEEEeccCCCCc---------------hhh
Q 025145 110 ANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVN--LRAVVGLSGWLPGS---------------RNL 172 (257)
Q Consensus 110 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~---------------~~~ 172 (257)
.+.+.......+++++||||||.+++.++.+. +++ +.+++++++..... ..+
T Consensus 163 i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~-----------~~~~~v~~~v~is~p~~l~~~~~~~~~~~~~~y~~~~ 231 (388)
T PLN02511 163 VDHVAGRYPSANLYAAGWSLGANILVNYLGEE-----------GENCPLSGAVSLCNPFDLVIADEDFHKGFNNVYDKAL 231 (388)
T ss_pred HHHHHHHCCCCCEEEEEechhHHHHHHHHHhc-----------CCCCCceEEEEECCCcCHHHHHHHHhccHHHHHHHHH
Confidence 44444433334899999999999999999864 443 77777666533210 000
Q ss_pred h----h--------------cc-------------------------ccc--------hHHHhhhcCCCEEEEccCCCCc
Q 025145 173 R----N--------------KI-------------------------EGS--------HEAARRAASLPILLTHGLCDDV 201 (257)
Q Consensus 173 ~----~--------------~~-------------------------~~~--------~~~~~~~~~~P~l~~~G~~D~~ 201 (257)
. . .+ ... .......+++|+|+++|++|++
T Consensus 232 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi 311 (388)
T PLN02511 232 AKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAANDPI 311 (388)
T ss_pred HHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcCCCCc
Confidence 0 0 00 000 0012345789999999999999
Q ss_pred ccchhh-HHHHHHhhhcCceeeEEEEecCCCCccCHHH----------HHHHHHHHHHhcCcC
Q 025145 202 VPYKYG-EKSANCLSISGFRHLTFKSFEGLGHYTVPKE----------MDEVCNWLTARLGLE 253 (257)
Q Consensus 202 v~~~~~-~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~----------~~~~~~~l~~~l~~~ 253 (257)
+|.+.. ....+.++ ++++++++++||....|. .+.+.+||.......
T Consensus 312 ~p~~~~~~~~~~~~p-----~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~~~ 369 (388)
T PLN02511 312 APARGIPREDIKANP-----NCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALEEGK 369 (388)
T ss_pred CCcccCcHhHHhcCC-----CEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHHHhc
Confidence 998654 33444443 789999999999766332 477888998765543
No 59
>PRK10985 putative hydrolase; Provisional
Probab=99.82 E-value=4.5e-19 Score=141.34 Aligned_cols=191 Identities=19% Similarity=0.134 Sum_probs=118.3
Q ss_pred CCceEEEEEccCCCCccc--hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025145 32 KHQATIVWLHGLGDNGSS--WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
..+|+||++||++++... +..+++.|.+.||+|+++|+||+|.+.... ...+. .....+ +..+
T Consensus 56 ~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~---~~~~~--------~~~~~D----~~~~ 120 (324)
T PRK10985 56 RHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRL---HRIYH--------SGETED----ARFF 120 (324)
T ss_pred CCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCC---cceEC--------CCchHH----HHHH
Confidence 356899999999887554 455888888899999999999875321110 00000 011222 3333
Q ss_pred HHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh------------------
Q 025145 110 ANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN------------------ 171 (257)
Q Consensus 110 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------------------ 171 (257)
.+.+.+.....+++++||||||.+++.++.+.. ....+.+++++++.+.....
T Consensus 121 i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~---------~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~l~~ 191 (324)
T PRK10985 121 LRWLQREFGHVPTAAVGYSLGGNMLACLLAKEG---------DDLPLDAAVIVSAPLMLEACSYRMEQGFSRVYQRYLLN 191 (324)
T ss_pred HHHHHHhCCCCCEEEEEecchHHHHHHHHHhhC---------CCCCccEEEEEcCCCCHHHHHHHHhhhHHHHHHHHHHH
Confidence 333333333348999999999998888877431 01237777777765321100
Q ss_pred -hhhc------------------cc----------------------------cchHHHhhhcCCCEEEEccCCCCcccc
Q 025145 172 -LRNK------------------IE----------------------------GSHEAARRAASLPILLTHGLCDDVVPY 204 (257)
Q Consensus 172 -~~~~------------------~~----------------------------~~~~~~~~~~~~P~l~~~G~~D~~v~~ 204 (257)
+... +. .........+++|+++++|++|.+++.
T Consensus 192 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~ 271 (324)
T PRK10985 192 LLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTH 271 (324)
T ss_pred HHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCCCCCCCh
Confidence 0000 00 000012355689999999999999998
Q ss_pred hhhHHHHHHhhhcCceeeEEEEecCCCCccCHH---------HHHHHHHHHHHhcC
Q 025145 205 KYGEKSANCLSISGFRHLTFKSFEGLGHYTVPK---------EMDEVCNWLTARLG 251 (257)
Q Consensus 205 ~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~---------~~~~~~~~l~~~l~ 251 (257)
+....+.+..+ ++++.+++++||....+ ..+.+.+|+...++
T Consensus 272 ~~~~~~~~~~~-----~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~~~ 322 (324)
T PRK10985 272 EVIPKPESLPP-----NVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTYLE 322 (324)
T ss_pred hhChHHHHhCC-----CeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHhhc
Confidence 77766654443 67889999999975532 13668888876654
No 60
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.82 E-value=3e-19 Score=133.85 Aligned_cols=169 Identities=14% Similarity=0.150 Sum_probs=106.1
Q ss_pred CCCceEEEEEccCCCCccchH---HHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHH
Q 025145 31 GKHQATIVWLHGLGDNGSSWS---QLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAA 107 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~~---~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 107 (257)
+++.|+||++||.+++...+. .+...+.+.|+.|++||.++++.. .....|+...... .......++.+.++
T Consensus 10 ~~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~i~ 84 (212)
T TIGR01840 10 TGPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSS----NNCWDWFFTHHRA-RGTGEVESLHQLID 84 (212)
T ss_pred CCCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCcccc----CCCCCCCCccccC-CCCccHHHHHHHHH
Confidence 457899999999998877665 234444457999999999876421 1123444322111 11122333333344
Q ss_pred HHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch-hhhhccc------cc-
Q 025145 108 HIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR-NLRNKIE------GS- 179 (257)
Q Consensus 108 ~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~------~~- 179 (257)
.+.+. .....++++|+|||+||.+++.++.+ +++.+++++.+++...... ....... ..
T Consensus 85 ~~~~~--~~id~~~i~l~G~S~Gg~~a~~~a~~-----------~p~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 151 (212)
T TIGR01840 85 AVKAN--YSIDPNRVYVTGLSAGGGMTAVLGCT-----------YPDVFAGGASNAGLPYGEASSSISATPQMCTAATAA 151 (212)
T ss_pred HHHHh--cCcChhheEEEEECHHHHHHHHHHHh-----------CchhheEEEeecCCcccccccchhhHhhcCCCCCHH
Confidence 33321 12233599999999999999999985 4888999999988654221 0000000 00
Q ss_pred --hH------HHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhc
Q 025145 180 --HE------AARRAASLPILLTHGLCDDVVPYKYGEKSANCLSIS 217 (257)
Q Consensus 180 --~~------~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~ 217 (257)
.. ........|++++||++|.+||++.++.+.+++++.
T Consensus 152 ~~~~~~~~~~~~~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 152 SVCRLVRGMQSEYNGPTPIMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred HHHHHHhccCCcccCCCCeEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 00 011123455789999999999999999999999865
No 61
>PRK10162 acetyl esterase; Provisional
Probab=99.82 E-value=1.7e-18 Score=137.37 Aligned_cols=200 Identities=19% Similarity=0.161 Sum_probs=132.2
Q ss_pred EeCCCCCCceEEEEEccCC---CCccchHHHhhcCCC-CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhh
Q 025145 26 VVRPKGKHQATIVWLHGLG---DNGSSWSQLLESLPL-PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEG 101 (257)
Q Consensus 26 ~~~~~~~~~~~vi~~HG~~---~~~~~~~~~~~~l~~-~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 101 (257)
++.|..+..|+||++||.| ++...|..+++.|+. .|+.|+.+|+|..+. ...+....+
T Consensus 73 ~y~P~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape------------------~~~p~~~~D 134 (318)
T PRK10162 73 LYYPQPDSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPE------------------ARFPQAIEE 134 (318)
T ss_pred EECCCCCCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCC------------------CCCCCcHHH
Confidence 3344445578999999977 455567778888874 599999999773211 112223445
Q ss_pred HHHHHHHHHHHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhh-----hc
Q 025145 102 LDASAAHIANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLR-----NK 175 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-----~~ 175 (257)
..+.+.++.+..+... +.++|+|+|+|+||.+++.++.+..... ..+..++++++++|++...+... ..
T Consensus 135 ~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~-----~~~~~~~~~vl~~p~~~~~~~~s~~~~~~~ 209 (318)
T PRK10162 135 IVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQ-----IDCGKVAGVLLWYGLYGLRDSVSRRLLGGV 209 (318)
T ss_pred HHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcC-----CCccChhheEEECCccCCCCChhHHHhCCC
Confidence 5555555555544433 3459999999999999999987431100 01356888888888654321100 00
Q ss_pred ---c-------------c-----cchH-----HHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecC
Q 025145 176 ---I-------------E-----GSHE-----AARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEG 229 (257)
Q Consensus 176 ---~-------------~-----~~~~-----~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g 229 (257)
+ . ..+. ......-.|+++++|+.|.+. +.+..+.++++++|+ ++++++++|
T Consensus 210 ~~~l~~~~~~~~~~~y~~~~~~~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L~--de~~~~~~~L~~aGv-~v~~~~~~g 286 (318)
T PRK10162 210 WDGLTQQDLQMYEEAYLSNDADRESPYYCLFNNDLTRDVPPCFIAGAEFDPLL--DDSRLLYQTLAAHQQ-PCEFKLYPG 286 (318)
T ss_pred ccccCHHHHHHHHHHhCCCccccCCcccCcchhhhhcCCCCeEEEecCCCcCc--ChHHHHHHHHHHcCC-CEEEEEECC
Confidence 0 0 0000 000123469999999999985 468899999999998 899999999
Q ss_pred CCCccC---------HHHHHHHHHHHHHhcC
Q 025145 230 LGHYTV---------PKEMDEVCNWLTARLG 251 (257)
Q Consensus 230 ~~H~~~---------~~~~~~~~~~l~~~l~ 251 (257)
..|.+. .+.++.+.+||++.++
T Consensus 287 ~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 287 TLHAFLHYSRMMDTADDALRDGAQFFTAQLK 317 (318)
T ss_pred CceehhhccCchHHHHHHHHHHHHHHHHHhc
Confidence 999764 2456788889988765
No 62
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.82 E-value=2.4e-18 Score=139.89 Aligned_cols=200 Identities=15% Similarity=0.073 Sum_probs=126.3
Q ss_pred ceEEEEEccCCCCccc-------------hHHHhh---cCCCCceEEEccCCCCCCc-ccCCCCcccccccCCCCCCCCC
Q 025145 34 QATIVWLHGLGDNGSS-------------WSQLLE---SLPLPNIKWICPTAPTRPV-AILGGFPCTAWFDVGELSDDGP 96 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~-------------~~~~~~---~l~~~g~~v~~~d~~~~g~-~~~~g~~~~~w~~~~~~~~~~~ 96 (257)
.|+|||+||++++... |..++. .|...+|+|+++|++|+.. +..+...... ........
T Consensus 48 ~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~----~~~~~~~~ 123 (379)
T PRK00175 48 SNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPD----TGKPYGSD 123 (379)
T ss_pred CCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCC----CCCcccCC
Confidence 5899999999999874 555542 3434799999999997421 1111000000 00000000
Q ss_pred CchhhHHHHHHHHHHHhccCCCCce-EEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch-----
Q 025145 97 EDWEGLDASAAHIANLLSTEPADVK-VGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR----- 170 (257)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~-i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----- 170 (257)
....++.+.+.++.++++..... + ++|+||||||.+++.++.++ |++++++|++++......
T Consensus 124 ~~~~~~~~~~~~~~~~l~~l~~~-~~~~lvG~S~Gg~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~ 191 (379)
T PRK00175 124 FPVITIRDWVRAQARLLDALGIT-RLAAVVGGSMGGMQALEWAIDY-----------PDRVRSALVIASSARLSAQNIAF 191 (379)
T ss_pred CCcCCHHHHHHHHHHHHHHhCCC-CceEEEEECHHHHHHHHHHHhC-----------hHhhhEEEEECCCcccCHHHHHH
Confidence 11346677788888888776555 6 58999999999999999964 778888877764321100
Q ss_pred ------hhh---------------------------------------hccc---------------c------------
Q 025145 171 ------NLR---------------------------------------NKIE---------------G------------ 178 (257)
Q Consensus 171 ------~~~---------------------------------------~~~~---------------~------------ 178 (257)
.+. ..+. .
T Consensus 192 ~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 271 (379)
T PRK00175 192 NEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQGDK 271 (379)
T ss_pred HHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHHHHH
Confidence 000 0000 0
Q ss_pred ----------------------------chHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEec-C
Q 025145 179 ----------------------------SHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFE-G 229 (257)
Q Consensus 179 ----------------------------~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~-g 229 (257)
........+++|+|+++|+.|.++|++.++.+.+.++..+. .+++++++ +
T Consensus 272 ~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~-~~~l~~i~~~ 350 (379)
T PRK00175 272 FVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGA-DVSYAEIDSP 350 (379)
T ss_pred HhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCC-CeEEEEeCCC
Confidence 00111245688999999999999999999999999986543 45777775 8
Q ss_pred CCCccCHHHHHHHHHHHHHhc
Q 025145 230 LGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 230 ~~H~~~~~~~~~~~~~l~~~l 250 (257)
+||....+..+.+.+-|.++|
T Consensus 351 ~GH~~~le~p~~~~~~L~~FL 371 (379)
T PRK00175 351 YGHDAFLLDDPRYGRLVRAFL 371 (379)
T ss_pred CCchhHhcCHHHHHHHHHHHH
Confidence 999988555444444444433
No 63
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.81 E-value=6.9e-19 Score=164.03 Aligned_cols=192 Identities=20% Similarity=0.241 Sum_probs=127.2
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025145 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
..++|||+||++++...|..++..|. .+|+|+++|+||||.+...... .........++...++++..+
T Consensus 1370 ~~~~vVllHG~~~s~~~w~~~~~~L~-~~~rVi~~Dl~G~G~S~~~~~~----------~~~~~~~~~si~~~a~~l~~l 1438 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDWIPIMKAIS-GSARCISIDLPGHGGSKIQNHA----------KETQTEPTLSVELVADLLYKL 1438 (1655)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHh-CCCEEEEEcCCCCCCCCCcccc----------ccccccccCCHHHHHHHHHHH
Confidence 45799999999999999999999997 5799999999988765322110 000011123445556666666
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch----------------------
Q 025145 113 LSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR---------------------- 170 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---------------------- 170 (257)
+++.... +++|+||||||.+++.++.++ |+++++++++++......
T Consensus 1439 l~~l~~~-~v~LvGhSmGG~iAl~~A~~~-----------P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g 1506 (1655)
T PLN02980 1439 IEHITPG-KVTLVGYSMGARIALYMALRF-----------SDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHG 1506 (1655)
T ss_pred HHHhCCC-CEEEEEECHHHHHHHHHHHhC-----------hHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhh
Confidence 6654433 999999999999999999854 888888888765311100
Q ss_pred ---hhhhccc----------------------c-c------------------hHHHhhhcCCCEEEEccCCCCcccchh
Q 025145 171 ---NLRNKIE----------------------G-S------------------HEAARRAASLPILLTHGLCDDVVPYKY 206 (257)
Q Consensus 171 ---~~~~~~~----------------------~-~------------------~~~~~~~~~~P~l~~~G~~D~~v~~~~ 206 (257)
....++. . . .......+++|+|+++|++|..++ +.
T Consensus 1507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~ 1585 (1655)
T PLN02980 1507 LEIFLENWYSGELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QI 1585 (1655)
T ss_pred HHHHHHHhccHHHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HH
Confidence 0000000 0 0 001234568999999999999875 56
Q ss_pred hHHHHHHhhhc-------CceeeEEEEecCCCCccCHHHHHH----HHHHHHH
Q 025145 207 GEKSANCLSIS-------GFRHLTFKSFEGLGHYTVPKEMDE----VCNWLTA 248 (257)
Q Consensus 207 ~~~~~~~l~~~-------~~~~~~~~~~~g~~H~~~~~~~~~----~~~~l~~ 248 (257)
+.++.+.+... +.+.+++++++++||.++.+..+. +.+||.+
T Consensus 1586 a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~ 1638 (1655)
T PLN02980 1586 AQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTR 1638 (1655)
T ss_pred HHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHh
Confidence 67777777642 011258999999999998665544 4455554
No 64
>PRK05855 short chain dehydrogenase; Validated
Probab=99.79 E-value=1.2e-18 Score=149.84 Aligned_cols=91 Identities=16% Similarity=0.167 Sum_probs=69.4
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025145 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
..|+|||+||++++...|..+.+.|. .+|+|+++|+||+|.+.... .....++.+.++++..+
T Consensus 24 ~~~~ivllHG~~~~~~~w~~~~~~L~-~~~~Vi~~D~~G~G~S~~~~----------------~~~~~~~~~~a~dl~~~ 86 (582)
T PRK05855 24 DRPTVVLVHGYPDNHEVWDGVAPLLA-DRFRVVAYDVRGAGRSSAPK----------------RTAAYTLARLADDFAAV 86 (582)
T ss_pred CCCeEEEEcCCCchHHHHHHHHHHhh-cceEEEEecCCCCCCCCCCC----------------cccccCHHHHHHHHHHH
Confidence 46799999999999999999999995 78999999999887543211 11123456666677777
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHh
Q 025145 113 LSTEPADVKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
++......++.|+||||||.+++.++.+
T Consensus 87 i~~l~~~~~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 87 IDAVSPDRPVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred HHHhCCCCcEEEEecChHHHHHHHHHhC
Confidence 7665444369999999999999888775
No 65
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.79 E-value=5.5e-18 Score=133.21 Aligned_cols=211 Identities=16% Similarity=0.130 Sum_probs=126.0
Q ss_pred CCCceEEeCC-CCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCC-----CCcccccccCCCCCC
Q 025145 20 EFGRTHVVRP-KGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILG-----GFPCTAWFDVGELSD 93 (257)
Q Consensus 20 ~~~~~~~~~~-~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~-----g~~~~~w~~~~~~~~ 93 (257)
.+..++..+. .+.+.|+||.+||.++....+..... ++..|+.|+.+|.+|+|..... +.....|.. .+...
T Consensus 68 ~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~-~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~-~g~~~ 145 (320)
T PF05448_consen 68 RVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLP-WAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHIT-RGIDD 145 (320)
T ss_dssp EEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHH-HHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTT-TTTTS
T ss_pred EEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccc-cccCCeEEEEecCCCCCCCCCCccccCCCCCccHHh-cCccC
Confidence 3334454454 56778999999999999877766544 3458999999999988722211 111122221 22221
Q ss_pred -CCCCchhhH-HHHHHHHHHHhccC--CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc
Q 025145 94 -DGPEDWEGL-DASAAHIANLLSTE--PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS 169 (257)
Q Consensus 94 -~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 169 (257)
........+ .+.+.. .+++... .+.++|++.|.|+||.+++.++.. .++|+++++..|++...
T Consensus 146 ~~e~~yyr~~~~D~~ra-vd~l~slpevD~~rI~v~G~SqGG~lal~~aaL------------d~rv~~~~~~vP~l~d~ 212 (320)
T PF05448_consen 146 NPEDYYYRRVYLDAVRA-VDFLRSLPEVDGKRIGVTGGSQGGGLALAAAAL------------DPRVKAAAADVPFLCDF 212 (320)
T ss_dssp -TTT-HHHHHHHHHHHH-HHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHH------------SST-SEEEEESESSSSH
T ss_pred chHHHHHHHHHHHHHHH-HHHHHhCCCcCcceEEEEeecCchHHHHHHHHh------------CccccEEEecCCCccch
Confidence 111112222 333333 3455443 334699999999999999999985 67899999888876432
Q ss_pred hhhh-------------hccc---c---------------chHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcC
Q 025145 170 RNLR-------------NKIE---G---------------SHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISG 218 (257)
Q Consensus 170 ~~~~-------------~~~~---~---------------~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~ 218 (257)
.... ..+. . ........+++|+++..|-.|.+||+...-..++.++.
T Consensus 213 ~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~-- 290 (320)
T PF05448_consen 213 RRALELRADEGPYPEIRRYFRWRDPHHEREPEVFETLSYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPG-- 290 (320)
T ss_dssp HHHHHHT--STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--S--
T ss_pred hhhhhcCCccccHHHHHHHHhccCCCcccHHHHHHHHhhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCC--
Confidence 2111 0111 0 01114567899999999999999999999999999874
Q ss_pred ceeeEEEEecCCCCccCHHH-HHHHHHHHHHh
Q 025145 219 FRHLTFKSFEGLGHYTVPKE-MDEVCNWLTAR 249 (257)
Q Consensus 219 ~~~~~~~~~~g~~H~~~~~~-~~~~~~~l~~~ 249 (257)
++++.++|..+|...++. .+..++||.+.
T Consensus 291 --~K~l~vyp~~~He~~~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 291 --PKELVVYPEYGHEYGPEFQEDKQLNFLKEH 320 (320)
T ss_dssp --SEEEEEETT--SSTTHHHHHHHHHHHHHH-
T ss_pred --CeeEEeccCcCCCchhhHHHHHHHHHHhcC
Confidence 679999999999999887 78899999863
No 66
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.78 E-value=1.5e-17 Score=129.38 Aligned_cols=187 Identities=15% Similarity=0.126 Sum_probs=112.8
Q ss_pred CCCCCceEEEEEccCCC----CccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHH
Q 025145 29 PKGKHQATIVWLHGLGD----NGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDA 104 (257)
Q Consensus 29 ~~~~~~~~vi~~HG~~~----~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 104 (257)
|.+..++.||++||..+ +...|..+++.|+++||.|+++|+||+|.+... ........+
T Consensus 21 p~~~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~-----------------~~~~~~~~~ 83 (274)
T TIGR03100 21 PGASHTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGE-----------------NLGFEGIDA 83 (274)
T ss_pred CCCCCCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCC-----------------CCCHHHHHH
Confidence 33333456777777543 223356678899888999999999988754311 011222233
Q ss_pred HHHHHHHHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhh-----------
Q 025145 105 SAAHIANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNL----------- 172 (257)
Q Consensus 105 ~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~----------- 172 (257)
++..+.+.+.+.. ..++++++|||+||.+++.++.. +.+++++|++++++......
T Consensus 84 d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~------------~~~v~~lil~~p~~~~~~~~~~~~~~~~~~~ 151 (274)
T TIGR03100 84 DIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA------------DLRVAGLVLLNPWVRTEAAQAASRIRHYYLG 151 (274)
T ss_pred HHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh------------CCCccEEEEECCccCCcccchHHHHHHHHHH
Confidence 3334444443332 22479999999999999999763 46899999999875422100
Q ss_pred --------hhc-------------cc-----c--c------------hHHHhhhcCCCEEEEccCCCCcccchh-----h
Q 025145 173 --------RNK-------------IE-----G--S------------HEAARRAASLPILLTHGLCDDVVPYKY-----G 207 (257)
Q Consensus 173 --------~~~-------------~~-----~--~------------~~~~~~~~~~P~l~~~G~~D~~v~~~~-----~ 207 (257)
... +. . . .......+++|+++++|..|...+.-. +
T Consensus 152 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~ll~~g~~D~~~~~~~~~~~~~ 231 (274)
T TIGR03100 152 QLLSADFWRKLLSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERFQGPVLFILSGNDLTAQEFADSVLGE 231 (274)
T ss_pred HHhChHHHHHhcCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhcCCcEEEEEcCcchhHHHHHHHhccC
Confidence 000 00 0 0 001223568999999999998864211 1
Q ss_pred HHHHHHhhhcCceeeEEEEecCCCCccCHH-----HHHHHHHHHH
Q 025145 208 EKSANCLSISGFRHLTFKSFEGLGHYTVPK-----EMDEVCNWLT 247 (257)
Q Consensus 208 ~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~-----~~~~~~~~l~ 247 (257)
....+.+... ++++..+++++|.+..+ ..+.+.+||+
T Consensus 232 ~~~~~~l~~~---~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 232 PAWRGALEDP---GIERVEIDGADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred hhhHHHhhcC---CeEEEecCCCCcccccHHHHHHHHHHHHHHHh
Confidence 3334444322 67999999999988532 3355566653
No 67
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.78 E-value=8.4e-18 Score=123.84 Aligned_cols=217 Identities=18% Similarity=0.191 Sum_probs=149.1
Q ss_pred cCCCCCceEEeCCCC-CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCC-----CC-cccccccCC
Q 025145 17 RTFEFGRTHVVRPKG-KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILG-----GF-PCTAWFDVG 89 (257)
Q Consensus 17 ~~~~~~~~~~~~~~~-~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~-----g~-~~~~w~~~~ 89 (257)
++..+..+++.+... .+.|.||-.||+++....|..+...-. .||.|+.+|.||+|.+..+ +. ..+.|...+
T Consensus 65 ~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l~wa~-~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrG 143 (321)
T COG3458 65 GGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDMLHWAV-AGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRG 143 (321)
T ss_pred CCceEEEEEEeecccCCccceEEEEeeccCCCCCccccccccc-cceeEEEEecccCCCccccCCCCCCCCcCCceeEee
Confidence 556667788777766 788999999999999988877766544 8999999999998766431 21 223343333
Q ss_pred CCCCCCCCchh-hHHHHHHHHHHHhcc-CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCC
Q 025145 90 ELSDDGPEDWE-GLDASAAHIANLLST-EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLP 167 (257)
Q Consensus 90 ~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 167 (257)
..+........ -+.+.+.++.-++.- +.+.++|.+.|.|+||.+++..+.. .++++++++..|++.
T Consensus 144 ilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal------------~~rik~~~~~~Pfl~ 211 (321)
T COG3458 144 ILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAAL------------DPRIKAVVADYPFLS 211 (321)
T ss_pred cccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhc------------Chhhhcccccccccc
Confidence 32212221122 234444444333322 2344699999999999999999873 678888888888765
Q ss_pred Cchhhhhccc--------------c-------------chHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCce
Q 025145 168 GSRNLRNKIE--------------G-------------SHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFR 220 (257)
Q Consensus 168 ~~~~~~~~~~--------------~-------------~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~ 220 (257)
......+... . .....+..+++|+|+..|-.|.+||+...-..++++..
T Consensus 212 df~r~i~~~~~~~ydei~~y~k~h~~~e~~v~~TL~yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~---- 287 (321)
T COG3458 212 DFPRAIELATEGPYDEIQTYFKRHDPKEAEVFETLSYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTT---- 287 (321)
T ss_pred cchhheeecccCcHHHHHHHHHhcCchHHHHHHHHhhhhhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccC----
Confidence 4322221110 0 00113567899999999999999999999999999985
Q ss_pred eeEEEEecCCCCccCHHHHH-HHHHHHHHhc
Q 025145 221 HLTFKSFEGLGHYTVPKEMD-EVCNWLTARL 250 (257)
Q Consensus 221 ~~~~~~~~g~~H~~~~~~~~-~~~~~l~~~l 250 (257)
..++.+++.-+|.-.+...+ ++..|+....
T Consensus 288 ~K~i~iy~~~aHe~~p~~~~~~~~~~l~~l~ 318 (321)
T COG3458 288 SKTIEIYPYFAHEGGPGFQSRQQVHFLKILF 318 (321)
T ss_pred CceEEEeeccccccCcchhHHHHHHHHHhhc
Confidence 56788888888988776654 4888887654
No 68
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.78 E-value=2.7e-17 Score=120.33 Aligned_cols=189 Identities=20% Similarity=0.189 Sum_probs=132.8
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025145 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
...+.++++|-.|+++..|+.+.+.|. ..+.++++++|||+..... ....++.+.++.+..
T Consensus 5 ~~~~~L~cfP~AGGsa~~fr~W~~~lp-~~iel~avqlPGR~~r~~e------------------p~~~di~~Lad~la~ 65 (244)
T COG3208 5 GARLRLFCFPHAGGSASLFRSWSRRLP-ADIELLAVQLPGRGDRFGE------------------PLLTDIESLADELAN 65 (244)
T ss_pred CCCceEEEecCCCCCHHHHHHHHhhCC-chhheeeecCCCcccccCC------------------cccccHHHHHHHHHH
Confidence 456789999999999999999999886 5799999999988643322 124556666777766
Q ss_pred HhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh---h--------hhcc----
Q 025145 112 LLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN---L--------RNKI---- 176 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---~--------~~~~---- 176 (257)
.+.....+.+++++||||||.+|..+|.+..... - ...+++..++-.|.... + .+.+
T Consensus 66 el~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g-------~-~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lg 137 (244)
T COG3208 66 ELLPPLLDAPFALFGHSMGAMLAFEVARRLERAG-------L-PPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLG 137 (244)
T ss_pred HhccccCCCCeeecccchhHHHHHHHHHHHHHcC-------C-CcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhC
Confidence 6663233449999999999999999998752211 1 13344433332221110 0 0000
Q ss_pred ---------------------------ccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecC
Q 025145 177 ---------------------------EGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEG 229 (257)
Q Consensus 177 ---------------------------~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g 229 (257)
............+|+..+.|++|..+..+....+.+..+. ..++..++|
T Consensus 138 G~p~e~led~El~~l~LPilRAD~~~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~----~f~l~~fdG 213 (244)
T COG3208 138 GTPPELLEDPELMALFLPILRADFRALESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKG----DFTLRVFDG 213 (244)
T ss_pred CCChHHhcCHHHHHHHHHHHHHHHHHhcccccCCCCCcCcceEEeccCcchhccHHHHHHHHHhhcC----CceEEEecC
Confidence 0000002235689999999999999999888878887764 689999997
Q ss_pred CCCccCHHHHHHHHHHHHHhcCc
Q 025145 230 LGHYTVPKEMDEVCNWLTARLGL 252 (257)
Q Consensus 230 ~~H~~~~~~~~~~~~~l~~~l~~ 252 (257)
||++..+..+.++++|.+.++.
T Consensus 214 -gHFfl~~~~~~v~~~i~~~l~~ 235 (244)
T COG3208 214 -GHFFLNQQREEVLARLEQHLAH 235 (244)
T ss_pred -cceehhhhHHHHHHHHHHHhhh
Confidence 9999999999999999988863
No 69
>PRK10115 protease 2; Provisional
Probab=99.76 E-value=4e-17 Score=140.98 Aligned_cols=215 Identities=16% Similarity=0.050 Sum_probs=146.8
Q ss_pred ccCCCCCceEEeCCC---CCCceEEEEEccCCCCcc--chHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCC
Q 025145 16 RRTFEFGRTHVVRPK---GKHQATIVWLHGLGDNGS--SWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGE 90 (257)
Q Consensus 16 ~~~~~~~~~~~~~~~---~~~~~~vi~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~ 90 (257)
.++..++.++++++. ..+.|+||+.||..+... .|......|..+||.|+.++.||.+ |+ ...|+..+.
T Consensus 424 ~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~-----g~-G~~w~~~g~ 497 (686)
T PRK10115 424 RDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGG-----EL-GQQWYEDGK 497 (686)
T ss_pred CCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCC-----cc-CHHHHHhhh
Confidence 455666666666553 345699999999665553 3666666777799999999988532 11 135554322
Q ss_pred CCCCCCCchhhHHHHHHHHHHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc
Q 025145 91 LSDDGPEDWEGLDASAAHIANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS 169 (257)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 169 (257)
.. .. ..++.+.++.+..++++. ..++++++.|.|.||+++..++.+. |+.++++|+..|++...
T Consensus 498 ~~-~k---~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~-----------Pdlf~A~v~~vp~~D~~ 562 (686)
T PRK10115 498 FL-KK---KNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQR-----------PELFHGVIAQVPFVDVV 562 (686)
T ss_pred hh-cC---CCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcC-----------hhheeEEEecCCchhHh
Confidence 21 11 234555566666666664 3446999999999999999999853 89999999988875543
Q ss_pred hhhhh-----------c-------------cccchHHHhhhcCCC-EEEEccCCCCcccchhhHHHHHHhhhcCceeeEE
Q 025145 170 RNLRN-----------K-------------IEGSHEAARRAASLP-ILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTF 224 (257)
Q Consensus 170 ~~~~~-----------~-------------~~~~~~~~~~~~~~P-~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~ 224 (257)
..+.. . ....+......++.| +|+++|.+|..||+.++.+++.+|++.+. +.+.
T Consensus 563 ~~~~~~~~p~~~~~~~e~G~p~~~~~~~~l~~~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~-~~~~ 641 (686)
T PRK10115 563 TTMLDESIPLTTGEFEEWGNPQDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKT-DDHL 641 (686)
T ss_pred hhcccCCCCCChhHHHHhCCCCCHHHHHHHHHcCchhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCC-CCce
Confidence 22110 0 011222344556778 67779999999999999999999999887 6777
Q ss_pred EEe---cCCCCccC------HHHHHHHHHHHHHhcCc
Q 025145 225 KSF---EGLGHYTV------PKEMDEVCNWLTARLGL 252 (257)
Q Consensus 225 ~~~---~g~~H~~~------~~~~~~~~~~l~~~l~~ 252 (257)
+++ ++.||... .+.......|+...+..
T Consensus 642 vl~~~~~~~GHg~~~~r~~~~~~~A~~~aFl~~~~~~ 678 (686)
T PRK10115 642 LLLCTDMDSGHGGKSGRFKSYEGVAMEYAFLIALAQG 678 (686)
T ss_pred EEEEecCCCCCCCCcCHHHHHHHHHHHHHHHHHHhCC
Confidence 888 89999854 22344566777776654
No 70
>PLN00021 chlorophyllase
Probab=99.73 E-value=1.4e-16 Score=125.19 Aligned_cols=183 Identities=18% Similarity=0.164 Sum_probs=114.1
Q ss_pred CceEEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhh
Q 025145 22 GRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEG 101 (257)
Q Consensus 22 ~~~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 101 (257)
+..++.+..+...|+|||+||++.+...|..+++.|+++||.|+++|.++.. + . .......+
T Consensus 40 p~~v~~P~~~g~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~-----~---------~----~~~~~i~d 101 (313)
T PLN00021 40 PLLVATPSEAGTYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLA-----G---------P----DGTDEIKD 101 (313)
T ss_pred eEEEEeCCCCCCCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcC-----C---------C----CchhhHHH
Confidence 3344445455677999999999999999999999999889999999977421 0 0 00111223
Q ss_pred HHHHHHHHHHHhccC------CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh---h
Q 025145 102 LDASAAHIANLLSTE------PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN---L 172 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~------~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---~ 172 (257)
..+...++.+.++.. .+.++++++|||+||.+++.++.+.+.. ..+.++++++++.++...... .
T Consensus 102 ~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~------~~~~~v~ali~ldPv~g~~~~~~~~ 175 (313)
T PLN00021 102 AAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAV------SLPLKFSALIGLDPVDGTSKGKQTP 175 (313)
T ss_pred HHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhcccc------ccccceeeEEeeccccccccccCCC
Confidence 333344444322211 2225899999999999999999854210 112468899988875432211 0
Q ss_pred hhccccchHHHhhhcCCCEEEEccCCCC-----ccc----chhh-HHHHHHhhhcCceeeEEEEecCCCCcc
Q 025145 173 RNKIEGSHEAARRAASLPILLTHGLCDD-----VVP----YKYG-EKSANCLSISGFRHLTFKSFEGLGHYT 234 (257)
Q Consensus 173 ~~~~~~~~~~~~~~~~~P~l~~~G~~D~-----~v~----~~~~-~~~~~~l~~~~~~~~~~~~~~g~~H~~ 234 (257)
...+.. ......+.+|++++.+..|. .+| .... .++++..+. +..+.+.+++||.-
T Consensus 176 p~il~~--~~~s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~----~~~~~~~~~~gH~~ 241 (313)
T PLN00021 176 PPVLTY--APHSFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKA----PAVHFVAKDYGHMD 241 (313)
T ss_pred Cccccc--CcccccCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCC----CeeeeeecCCCcce
Confidence 111100 01122367999999999763 222 3333 677777764 56788888899953
No 71
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.73 E-value=1.2e-16 Score=114.45 Aligned_cols=164 Identities=17% Similarity=0.243 Sum_probs=108.7
Q ss_pred EEEEccCCCCcc-chHH-HhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhc
Q 025145 37 IVWLHGLGDNGS-SWSQ-LLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLS 114 (257)
Q Consensus 37 vi~~HG~~~~~~-~~~~-~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (257)
|+++||++++.. .|.. +.+.+... ++|-.++.. ...+.++...+.+.+.
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~~----------------------------~P~~~~W~~~l~~~i~ 51 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDWD----------------------------NPDLDEWVQALDQAID 51 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--T----------------------------S--HHHHHHHHHHCCH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEeccccC----------------------------CCCHHHHHHHHHHHHh
Confidence 689999988765 4655 55666644 777766521 3355777778777776
Q ss_pred cCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCC-chhhhhccccchHHHhhhcCCCEEE
Q 025145 115 TEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPG-SRNLRNKIEGSHEAARRAASLPILL 193 (257)
Q Consensus 115 ~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~P~l~ 193 (257)
.. +.+++|||||+|+..++.++.. ....+++++++++|+.+. .....................|.++
T Consensus 52 ~~--~~~~ilVaHSLGc~~~l~~l~~----------~~~~~v~g~lLVAp~~~~~~~~~~~~~~~f~~~p~~~l~~~~~v 119 (171)
T PF06821_consen 52 AI--DEPTILVAHSLGCLTALRWLAE----------QSQKKVAGALLVAPFDPDDPEPFPPELDGFTPLPRDPLPFPSIV 119 (171)
T ss_dssp C---TTTEEEEEETHHHHHHHHHHHH----------TCCSSEEEEEEES--SCGCHHCCTCGGCCCTTSHCCHHHCCEEE
T ss_pred hc--CCCeEEEEeCHHHHHHHHHHhh----------cccccccEEEEEcCCCcccccchhhhccccccCcccccCCCeEE
Confidence 53 3379999999999999999942 347899999999998763 2222222222222233445677899
Q ss_pred EccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHH---HHHHHHHHH
Q 025145 194 THGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKE---MDEVCNWLT 247 (257)
Q Consensus 194 ~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~---~~~~~~~l~ 247 (257)
+.+++|+++|++.++++++++ +.+++.++++||+...+. +..+.+.|+
T Consensus 120 iaS~nDp~vp~~~a~~~A~~l------~a~~~~~~~~GHf~~~~G~~~~p~~~~~l~ 170 (171)
T PF06821_consen 120 IASDNDPYVPFERAQRLAQRL------GAELIILGGGGHFNAASGFGPWPEGLDLLQ 170 (171)
T ss_dssp EEETTBSSS-HHHHHHHHHHH------T-EEEEETS-TTSSGGGTHSS-HHHHHHHH
T ss_pred EEcCCCCccCHHHHHHHHHHc------CCCeEECCCCCCcccccCCCchHHHHHHhc
Confidence 999999999999999999999 468999999999987543 455555554
No 72
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.73 E-value=8.7e-16 Score=124.27 Aligned_cols=207 Identities=14% Similarity=0.037 Sum_probs=132.8
Q ss_pred CCceEEEEEccCCCCcc-------------chHHHh---hcCCCCceEEEccCCCCCCcccCC--CCcccccccC-CCCC
Q 025145 32 KHQATIVWLHGLGDNGS-------------SWSQLL---ESLPLPNIKWICPTAPTRPVAILG--GFPCTAWFDV-GELS 92 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~-------------~~~~~~---~~l~~~g~~v~~~d~~~~g~~~~~--g~~~~~w~~~-~~~~ 92 (257)
...++||+.|+++++.. .|..++ +.|.-..|-||++|..|.+.+.++ |...+.-... .+..
T Consensus 54 ~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~ 133 (389)
T PRK06765 54 AKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKP 133 (389)
T ss_pred CCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCc
Confidence 34579999999988542 155443 345567899999999876653332 1111100000 0111
Q ss_pred CCCCCchhhHHHHHHHHHHHhccCCCCceEE-EEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch-
Q 025145 93 DDGPEDWEGLDASAAHIANLLSTEPADVKVG-IGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR- 170 (257)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~- 170 (257)
....-...++.+.++++..++++.... ++. ++||||||.+++.++.++ |++++.+|++++......
T Consensus 134 ~~~~fP~~t~~d~~~~~~~ll~~lgi~-~~~~vvG~SmGG~ial~~a~~~-----------P~~v~~lv~ia~~~~~~~~ 201 (389)
T PRK06765 134 YGMDFPVVTILDFVRVQKELIKSLGIA-RLHAVMGPSMGGMQAQEWAVHY-----------PHMVERMIGVIGNPQNDAW 201 (389)
T ss_pred cCCCCCcCcHHHHHHHHHHHHHHcCCC-CceEEEEECHHHHHHHHHHHHC-----------hHhhheEEEEecCCCCChh
Confidence 111223457788888888888766554 765 999999999999999964 888888887754211000
Q ss_pred -------------------------------------------------hhhhcccc-----------------------
Q 025145 171 -------------------------------------------------NLRNKIEG----------------------- 178 (257)
Q Consensus 171 -------------------------------------------------~~~~~~~~----------------------- 178 (257)
.+......
T Consensus 202 ~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~yl~ 281 (389)
T PRK06765 202 TSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFEKEIN 281 (389)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHHHHHH
Confidence 00000000
Q ss_pred --------------------------------chHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEE
Q 025145 179 --------------------------------SHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKS 226 (257)
Q Consensus 179 --------------------------------~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~ 226 (257)
........+++|+++++|+.|.++|++.++.+.+.++..+. ++++++
T Consensus 282 ~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~-~a~l~~ 360 (389)
T PRK06765 282 KATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGK-YAEVYE 360 (389)
T ss_pred HHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCC-CeEEEE
Confidence 00012235689999999999999999999999999975433 679999
Q ss_pred ecC-CCCccCHHHHHHHHHHHHHhcC
Q 025145 227 FEG-LGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 227 ~~g-~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
+++ .||....+..+.+.+.|.+++.
T Consensus 361 I~s~~GH~~~le~p~~~~~~I~~FL~ 386 (389)
T PRK06765 361 IESINGHMAGVFDIHLFEKKIYEFLN 386 (389)
T ss_pred ECCCCCcchhhcCHHHHHHHHHHHHc
Confidence 985 8999886666666666665554
No 73
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.73 E-value=5.2e-17 Score=128.90 Aligned_cols=198 Identities=20% Similarity=0.236 Sum_probs=120.0
Q ss_pred CCCCceEEeCCCCCCceEEEEEccCCCCccchHHH-hhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCC
Q 025145 19 FEFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQL-LESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPE 97 (257)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~-~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~ 97 (257)
..++..+..++.+++.|+||++-|..+...++..+ .+.|+..|+.++++|.||.|.+. .|. . ..
T Consensus 175 ~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~-------~~~-l-------~~ 239 (411)
T PF06500_consen 175 KTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESP-------KWP-L-------TQ 239 (411)
T ss_dssp CEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGT-------TT--S--------S
T ss_pred cEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccc-------cCC-C-------Cc
Confidence 44445566677778889999999999999886655 46787899999999999876542 110 0 01
Q ss_pred chhhHHHHHHHHHHHhccC--CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh----
Q 025145 98 DWEGLDASAAHIANLLSTE--PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN---- 171 (257)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---- 171 (257)
+. ......+.+++... .+..+|+++|.|+||++|.++|... +++++++|++++.+...-.
T Consensus 240 D~---~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le-----------~~RlkavV~~Ga~vh~~ft~~~~ 305 (411)
T PF06500_consen 240 DS---SRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALE-----------DPRLKAVVALGAPVHHFFTDPEW 305 (411)
T ss_dssp -C---CHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHT-----------TTT-SEEEEES---SCGGH-HHH
T ss_pred CH---HHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhc-----------ccceeeEeeeCchHhhhhccHHH
Confidence 11 22334455555443 3346999999999999999998743 7899999999885321100
Q ss_pred -----------hhhcc--------------c---cchHHH--hhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCcee
Q 025145 172 -----------LRNKI--------------E---GSHEAA--RRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRH 221 (257)
Q Consensus 172 -----------~~~~~--------------~---~~~~~~--~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~ 221 (257)
+...+ . -..+-. ...+.+|+|.+.|++|.++|.+..+.++..-. +
T Consensus 306 ~~~~P~my~d~LA~rlG~~~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~-----~ 380 (411)
T PF06500_consen 306 QQRVPDMYLDVLASRLGMAAVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESST-----D 380 (411)
T ss_dssp HTTS-HHHHHHHHHHCT-SCE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTBT-----T
T ss_pred HhcCCHHHHHHHHHHhCCccCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcCC-----C
Confidence 00000 0 000001 25678999999999999999988776665544 3
Q ss_pred eEEEEecCCC-CccCHHHHHHHHHHHHHhc
Q 025145 222 LTFKSFEGLG-HYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 222 ~~~~~~~g~~-H~~~~~~~~~~~~~l~~~l 250 (257)
-+...++... |.-.++.+..+.+||.+.|
T Consensus 381 gk~~~~~~~~~~~gy~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 381 GKALRIPSKPLHMGYPQALDEIYKWLEDKL 410 (411)
T ss_dssp -EEEEE-SSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CceeecCCCccccchHHHHHHHHHHHHHhc
Confidence 4566666434 7767888999999998865
No 74
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.73 E-value=3.1e-16 Score=112.62 Aligned_cols=199 Identities=24% Similarity=0.319 Sum_probs=134.3
Q ss_pred CceEEEEEccCCCCccchHH----HhhcCCCCceEEEccCCCCC----CcccCCC----------Cc-ccccccCCCCCC
Q 025145 33 HQATIVWLHGLGDNGSSWSQ----LLESLPLPNIKWICPTAPTR----PVAILGG----------FP-CTAWFDVGELSD 93 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~----~~~~l~~~g~~v~~~d~~~~----g~~~~~g----------~~-~~~w~~~~~~~~ 93 (257)
.++-||++||+..+...+.. +.+.+. .-+..+.+|.|-. +.....+ .. ...||.....
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~-k~~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~-- 80 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLK-KLAELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEA-- 80 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHH-hhheEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccc--
Confidence 45689999999999887754 334443 3378888887731 1111111 11 2556655432
Q ss_pred CCCCchhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhh
Q 025145 94 DGPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLR 173 (257)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 173 (257)
.......++....++.+++.+..+ ==+|+|+|+|+.++..++....... ...-.+.++-+|++||+.+......
T Consensus 81 -~~~~~~~~eesl~yl~~~i~enGP--FDGllGFSQGA~laa~l~~~~~~~~---~~~~~P~~kF~v~~SGf~~~~~~~~ 154 (230)
T KOG2551|consen 81 -SFTEYFGFEESLEYLEDYIKENGP--FDGLLGFSQGAALAALLAGLGQKGL---PYVKQPPFKFAVFISGFKFPSKKLD 154 (230)
T ss_pred -ccccccChHHHHHHHHHHHHHhCC--CccccccchhHHHHHHhhcccccCC---cccCCCCeEEEEEEecCCCCcchhh
Confidence 223345567778888888877543 1279999999999999988221110 0111346899999999987643222
Q ss_pred hccccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC--HHHHHHHHHHHHHhcC
Q 025145 174 NKIEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV--PKEMDEVCNWLTARLG 251 (257)
Q Consensus 174 ~~~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l~~~l~ 251 (257)
.. .....+++|.|.+.|+.|.++|...+..|++.++ +..++.-|| ||.+. ....+.+.+||++.+.
T Consensus 155 ~~------~~~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~-----~a~vl~Hpg-gH~VP~~~~~~~~i~~fi~~~~~ 222 (230)
T KOG2551|consen 155 ES------AYKRPLSTPSLHIFGETDTIVPSERSEQLAESFK-----DATVLEHPG-GHIVPNKAKYKEKIADFIQSFLQ 222 (230)
T ss_pred hh------hhccCCCCCeeEEecccceeecchHHHHHHHhcC-----CCeEEecCC-CccCCCchHHHHHHHHHHHHHHH
Confidence 21 2234679999999999999999999999999998 445666665 99987 4456889999988765
Q ss_pred c
Q 025145 252 L 252 (257)
Q Consensus 252 ~ 252 (257)
.
T Consensus 223 ~ 223 (230)
T KOG2551|consen 223 E 223 (230)
T ss_pred h
Confidence 3
No 75
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.73 E-value=1.9e-17 Score=118.07 Aligned_cols=189 Identities=15% Similarity=0.138 Sum_probs=135.4
Q ss_pred CCCceEEEEEccCCCCccchHHHhhcCC-CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025145 31 GKHQATIVWLHGLGDNGSSWSQLLESLP-LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~~~~~~~l~-~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
....|+++++|+..++.......++.+- .-+.+|+.+++||- +.+.|. ..++.+.-+.+.+
T Consensus 75 E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGY--G~S~Gs----------------psE~GL~lDs~av 136 (300)
T KOG4391|consen 75 ESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGY--GKSEGS----------------PSEEGLKLDSEAV 136 (300)
T ss_pred cCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeecc--ccCCCC----------------ccccceeccHHHH
Confidence 3478999999999999887766555442 45799999997643 333332 1233444455666
Q ss_pred HHHhccC--CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhcc-----------
Q 025145 110 ANLLSTE--PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKI----------- 176 (257)
Q Consensus 110 ~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----------- 176 (257)
.+.+... ....+++|.|-|+||.+|+.+|+ ++.+++.++|.-..++..+.......
T Consensus 137 ldyl~t~~~~dktkivlfGrSlGGAvai~las-----------k~~~ri~~~ivENTF~SIp~~~i~~v~p~~~k~i~~l 205 (300)
T KOG4391|consen 137 LDYLMTRPDLDKTKIVLFGRSLGGAVAIHLAS-----------KNSDRISAIIVENTFLSIPHMAIPLVFPFPMKYIPLL 205 (300)
T ss_pred HHHHhcCccCCcceEEEEecccCCeeEEEeec-----------cchhheeeeeeechhccchhhhhheeccchhhHHHHH
Confidence 6666543 23359999999999999999998 45778999887666654422211111
Q ss_pred ----ccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC---HHHHHHHHHHHHHh
Q 025145 177 ----EGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV---PKEMDEVCNWLTAR 249 (257)
Q Consensus 177 ----~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~---~~~~~~~~~~l~~~ 249 (257)
.............|.|++.|.+|++||+-..+++++..... ..++.+||++.|.-. ...++.+.+||.+.
T Consensus 206 c~kn~~~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~---~Krl~eFP~gtHNDT~i~dGYfq~i~dFlaE~ 282 (300)
T KOG4391|consen 206 CYKNKWLSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSR---TKRLAEFPDGTHNDTWICDGYFQAIEDFLAEV 282 (300)
T ss_pred HHHhhhcchhhhccccCceEEeecCccccCCcHHHHHHHHhCchh---hhhheeCCCCccCceEEeccHHHHHHHHHHHh
Confidence 01112233467899999999999999999999999999876 679999999999754 55789999999886
Q ss_pred cC
Q 025145 250 LG 251 (257)
Q Consensus 250 l~ 251 (257)
..
T Consensus 283 ~~ 284 (300)
T KOG4391|consen 283 VK 284 (300)
T ss_pred cc
Confidence 54
No 76
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.72 E-value=1.8e-16 Score=113.84 Aligned_cols=194 Identities=18% Similarity=0.183 Sum_probs=131.5
Q ss_pred eEEeCCCCCCceEEEEEcc-CCCCccchHHHhhcCCCCceEEEccCCC-CCCcccC-CCCcccccccCCCCCCCCCCchh
Q 025145 24 THVVRPKGKHQATIVWLHG-LGDNGSSWSQLLESLPLPNIKWICPTAP-TRPVAIL-GGFPCTAWFDVGELSDDGPEDWE 100 (257)
Q Consensus 24 ~~~~~~~~~~~~~vi~~HG-~~~~~~~~~~~~~~l~~~g~~v~~~d~~-~~g~~~~-~g~~~~~w~~~~~~~~~~~~~~~ 100 (257)
.|+.-...+++ .||.+-. +|-...+-+..+..++.+||.|++||+- |-+.+.. +-.....|+... +.+
T Consensus 30 aYv~gs~~~~~-~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~--------~~~ 100 (242)
T KOG3043|consen 30 AYVVGSTSSKK-VLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGH--------SPP 100 (242)
T ss_pred EEEecCCCCCe-EEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcC--------Ccc
Confidence 44444444444 5555555 5555555788999999999999999953 2111111 111123343321 122
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccch
Q 025145 101 GLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSH 180 (257)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 180 (257)
.....+..+.++++......+|.++|++|||.++..+... .+ .+.+++++.|-+....
T Consensus 101 ~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~-----------~~-~f~a~v~~hps~~d~~---------- 158 (242)
T KOG3043|consen 101 KIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAK-----------DP-EFDAGVSFHPSFVDSA---------- 158 (242)
T ss_pred cchhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeecc-----------ch-hheeeeEecCCcCChh----------
Confidence 2344456666666666656699999999999999988873 23 7777777766443322
Q ss_pred HHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC---------------HHHHHHHHHH
Q 025145 181 EAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV---------------PKEMDEVCNW 245 (257)
Q Consensus 181 ~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~---------------~~~~~~~~~~ 245 (257)
.....++|++++.|+.|+.+|++....+.+.+++......++.+|+|.+|.+. .+.+.++..|
T Consensus 159 --D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~W 236 (242)
T KOG3043|consen 159 --DIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISW 236 (242)
T ss_pred --HHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHH
Confidence 23455799999999999999999999999999876432357999999999876 2346788889
Q ss_pred HHHhc
Q 025145 246 LTARL 250 (257)
Q Consensus 246 l~~~l 250 (257)
+.+.+
T Consensus 237 f~~y~ 241 (242)
T KOG3043|consen 237 FKHYL 241 (242)
T ss_pred HHHhh
Confidence 88765
No 77
>PLN02872 triacylglycerol lipase
Probab=99.72 E-value=5.6e-17 Score=131.17 Aligned_cols=61 Identities=16% Similarity=0.166 Sum_probs=48.6
Q ss_pred CCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCc--c-C----HHHHHHHHHHHHHhcCc
Q 025145 188 SLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHY--T-V----PKEMDEVCNWLTARLGL 252 (257)
Q Consensus 188 ~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~--~-~----~~~~~~~~~~l~~~l~~ 252 (257)
++|+++++|++|.+++++.++.+.+.++. ..+++.+++.+|. + . .+..+.+++||.+..+.
T Consensus 325 ~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~----~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~~~ 392 (395)
T PLN02872 325 SLPLWMGYGGTDGLADVTDVEHTLAELPS----KPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLGKS 392 (395)
T ss_pred CccEEEEEcCCCCCCCHHHHHHHHHHCCC----ccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhhhc
Confidence 57999999999999999999999998873 2478889999995 2 2 33467888898875543
No 78
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.71 E-value=2.6e-17 Score=122.95 Aligned_cols=183 Identities=24% Similarity=0.337 Sum_probs=101.8
Q ss_pred CceEEEEEccCCCCccchHHHhhcCC---CC-ceEEEccCCCCCC-----cc---------cCCCCcccccccCCCCCCC
Q 025145 33 HQATIVWLHGLGDNGSSWSQLLESLP---LP-NIKWICPTAPTRP-----VA---------ILGGFPCTAWFDVGELSDD 94 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~---~~-g~~v~~~d~~~~g-----~~---------~~~g~~~~~w~~~~~~~~~ 94 (257)
.++.||++||++++...++.....|. .. ++..+.+|.|..- .. ........+||.....
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~--- 79 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDD--- 79 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S----
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCC---
Confidence 46789999999999998876554443 23 7999999977542 11 1112344567665322
Q ss_pred CCCchhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhh
Q 025145 95 GPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRN 174 (257)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 174 (257)
......+.+.++.+.+.+++... -.+|+|+|+||.+|..++........ ......++.+|+++++.+.......
T Consensus 80 -~~~~~~~~~sl~~l~~~i~~~GP--fdGvlGFSQGA~lAa~ll~~~~~~~~---~~~~~~~kf~V~~sg~~p~~~~~~~ 153 (212)
T PF03959_consen 80 -DHEYEGLDESLDYLRDYIEENGP--FDGVLGFSQGAALAALLLALQQRGRP---DGAHPPFKFAVFISGFPPPDPDYQE 153 (212)
T ss_dssp -SGGG---HHHHHHHHHHHHHH-----SEEEEETHHHHHHHHHHHHHHHHST-----T----SEEEEES----EEE-GTT
T ss_pred -cccccCHHHHHHHHHHHHHhcCC--eEEEEeecHHHHHHHHHHHHHHhhcc---cccCCCceEEEEEcccCCCchhhhh
Confidence 33466778888888888877542 35899999999999999875321110 0024568899999999886544333
Q ss_pred ccccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC
Q 025145 175 KIEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV 235 (257)
Q Consensus 175 ~~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 235 (257)
.+ ....+++|+|.++|++|.+++.+.++.+.+.+.. ..+++..+| ||.+.
T Consensus 154 ~~------~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~----~~~v~~h~g-GH~vP 203 (212)
T PF03959_consen 154 LY------DEPKISIPTLHVIGENDPVVPPERSEALAEMFDP----DARVIEHDG-GHHVP 203 (212)
T ss_dssp TT--------TT---EEEEEEETT-SSS-HHHHHHHHHHHHH----HEEEEEESS-SSS--
T ss_pred hh------ccccCCCCeEEEEeCCCCCcchHHHHHHHHhccC----CcEEEEECC-CCcCc
Confidence 22 2346699999999999999999999999999983 167888885 99876
No 79
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.71 E-value=1.3e-15 Score=116.72 Aligned_cols=172 Identities=12% Similarity=0.068 Sum_probs=111.5
Q ss_pred CCCCceEEEEEccCCCCcc----chHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025145 30 KGKHQATIVWLHGLGDNGS----SWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 30 ~~~~~~~vi~~HG~~~~~~----~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
..+++++|||+||++++.. .|..+++.|++.||.|+.+|+||+|.+.... .........++
T Consensus 21 ~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~---------------~~~~~~~~~~D 85 (266)
T TIGR03101 21 AVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDF---------------AAARWDVWKED 85 (266)
T ss_pred CCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcc---------------ccCCHHHHHHH
Confidence 3455789999999987544 3556788888889999999999876542110 01123334444
Q ss_pred HHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhcc---------
Q 025145 106 AAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKI--------- 176 (257)
Q Consensus 106 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--------- 176 (257)
+..+.+++++.. ..+++|+||||||.+++.++.+. +..++++|++++.......+.+.+
T Consensus 86 v~~ai~~L~~~~-~~~v~LvG~SmGG~vAl~~A~~~-----------p~~v~~lVL~~P~~~g~~~l~~~lrl~~~~~~~ 153 (266)
T TIGR03101 86 VAAAYRWLIEQG-HPPVTLWGLRLGALLALDAANPL-----------AAKCNRLVLWQPVVSGKQQLQQFLRLRLVARRL 153 (266)
T ss_pred HHHHHHHHHhcC-CCCEEEEEECHHHHHHHHHHHhC-----------ccccceEEEeccccchHHHHHHHHHHHHHHHhc
Confidence 445555565543 34999999999999999998853 788999999988654332222210
Q ss_pred ccc--------------------------hH-----HHhhh-----cCCCEEEEccCC--CCcccchhhHHHHHHhhhcC
Q 025145 177 EGS--------------------------HE-----AARRA-----ASLPILLTHGLC--DDVVPYKYGEKSANCLSISG 218 (257)
Q Consensus 177 ~~~--------------------------~~-----~~~~~-----~~~P~l~~~G~~--D~~v~~~~~~~~~~~l~~~~ 218 (257)
... +. ...+. ...+++++.-.. |.- .......+.+++++.|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g 232 (266)
T TIGR03101 154 GGESAEASNSLRERLLAGEDVEIAGYELAPALASDLDQRQLAPAVPKNCPVHWFEVRPEEGAT-LSPVFSRLGEQWVQSG 232 (266)
T ss_pred cccccccchhHHhhccCCCeEEEeceecCHHHHHHHHhcccCCCCCCCCceEEEEeccccCCC-CCHHHHHHHHHHHHcC
Confidence 000 00 00111 144677776532 322 2335578999999999
Q ss_pred ceeeEEEEecCC
Q 025145 219 FRHLTFKSFEGL 230 (257)
Q Consensus 219 ~~~~~~~~~~g~ 230 (257)
+ .++...++|.
T Consensus 233 ~-~v~~~~~~~~ 243 (266)
T TIGR03101 233 V-EVTVDLVPGP 243 (266)
T ss_pred C-eEeeeecCCc
Confidence 8 8999999986
No 80
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.70 E-value=2.1e-16 Score=111.53 Aligned_cols=190 Identities=14% Similarity=0.027 Sum_probs=128.6
Q ss_pred eCCCCCCceEEEEEccC-CCCccchHHHhhcCCCC-ceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHH
Q 025145 27 VRPKGKHQATIVWLHGL-GDNGSSWSQLLESLPLP-NIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDA 104 (257)
Q Consensus 27 ~~~~~~~~~~vi~~HG~-~~~~~~~~~~~~~l~~~-g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 104 (257)
|-..+.....|+++.|. |+...+|.+....+... .+.+++.|.||-|.+..+. .....+.+..
T Consensus 35 y~~~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~---------------Rkf~~~ff~~ 99 (277)
T KOG2984|consen 35 YCKYGHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPE---------------RKFEVQFFMK 99 (277)
T ss_pred eeecCCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCc---------------ccchHHHHHH
Confidence 33445555689999996 55566898877777643 4999999999755443322 1223455666
Q ss_pred HHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch----------hhhh
Q 025145 105 SAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR----------NLRN 174 (257)
Q Consensus 105 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----------~~~~ 174 (257)
++++..++++..... ++.|+|+|-||..|+..|++. ++.+..++.+++....+. ....
T Consensus 100 Da~~avdLM~aLk~~-~fsvlGWSdGgiTalivAak~-----------~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~k 167 (277)
T KOG2984|consen 100 DAEYAVDLMEALKLE-PFSVLGWSDGGITALIVAAKG-----------KEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNK 167 (277)
T ss_pred hHHHHHHHHHHhCCC-CeeEeeecCCCeEEEEeeccC-----------hhhhhhheeecccceecchhHHHHhchHHHhh
Confidence 677777777665444 999999999999999999954 777877777755311110 0000
Q ss_pred cc-----------------------------------ccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCc
Q 025145 175 KI-----------------------------------EGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGF 219 (257)
Q Consensus 175 ~~-----------------------------------~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~ 219 (257)
+. .+........+++|++|+||+.|++++...+--+....+
T Consensus 168 Ws~r~R~P~e~~Yg~e~f~~~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~---- 243 (277)
T KOG2984|consen 168 WSARGRQPYEDHYGPETFRTQWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKS---- 243 (277)
T ss_pred hhhhhcchHHHhcCHHHHHHHHHHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcc----
Confidence 00 001112445679999999999999999888776666665
Q ss_pred eeeEEEEecCCCCccC----HHHHHHHHHHHHH
Q 025145 220 RHLTFKSFEGLGHYTV----PKEMDEVCNWLTA 248 (257)
Q Consensus 220 ~~~~~~~~~g~~H~~~----~~~~~~~~~~l~~ 248 (257)
..++.++|.++|.++ .+.-+.+.+|+++
T Consensus 244 -~a~~~~~peGkHn~hLrya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 244 -LAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKS 275 (277)
T ss_pred -cceEEEccCCCcceeeechHHHHHHHHHHHhc
Confidence 568999999999987 3444566777654
No 81
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.70 E-value=3.8e-16 Score=125.95 Aligned_cols=183 Identities=15% Similarity=0.101 Sum_probs=117.6
Q ss_pred CceEEEEEccCCCCccc-----hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhH-HHHH
Q 025145 33 HQATIVWLHGLGDNGSS-----WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGL-DASA 106 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~-----~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~-~~~~ 106 (257)
.+++||++||...+... +..+++.|.++||.|+++|+++++.+.. .....++ .+.+
T Consensus 61 ~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~------------------~~~~~d~~~~~~ 122 (350)
T TIGR01836 61 HKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADR------------------YLTLDDYINGYI 122 (350)
T ss_pred CCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHh------------------cCCHHHHHHHHH
Confidence 35579999997654433 3578999988999999999876432110 0112222 1223
Q ss_pred HHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh---------------
Q 025145 107 AHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN--------------- 171 (257)
Q Consensus 107 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--------------- 171 (257)
..+.+.+.+.....++.++||||||.+++.++... ++++++++++++.+.....
T Consensus 123 ~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~-----------~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~ 191 (350)
T TIGR01836 123 DKCVDYICRTSKLDQISLLGICQGGTFSLCYAALY-----------PDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDL 191 (350)
T ss_pred HHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhC-----------chheeeEEEeccccccCCCCchhhhhccccCHHH
Confidence 33333333333334999999999999999998853 6677777777654321100
Q ss_pred -------------------------hh-----------------------hcccc---ch--------------------
Q 025145 172 -------------------------LR-----------------------NKIEG---SH-------------------- 180 (257)
Q Consensus 172 -------------------------~~-----------------------~~~~~---~~-------------------- 180 (257)
.. .+... ..
T Consensus 192 ~~~~~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g 271 (350)
T TIGR01836 192 AVDTMGNIPGELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLING 271 (350)
T ss_pred HHHhcCCCCHHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCC
Confidence 00 00000 00
Q ss_pred -------HHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC-------HHHHHHHHHHH
Q 025145 181 -------EAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV-------PKEMDEVCNWL 246 (257)
Q Consensus 181 -------~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-------~~~~~~~~~~l 246 (257)
......+++|+++++|++|.++|++.++.+.+.+... +++++++++ ||... .+.+..+.+||
T Consensus 272 ~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~---~~~~~~~~~-gH~~~~~~~~~~~~v~~~i~~wl 347 (350)
T TIGR01836 272 EVEIGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSE---DYTELSFPG-GHIGIYVSGKAQKEVPPAIGKWL 347 (350)
T ss_pred eeEECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCC---CeEEEEcCC-CCEEEEECchhHhhhhHHHHHHH
Confidence 0013346899999999999999999999999988753 568888885 77643 34567888888
Q ss_pred HH
Q 025145 247 TA 248 (257)
Q Consensus 247 ~~ 248 (257)
.+
T Consensus 348 ~~ 349 (350)
T TIGR01836 348 QA 349 (350)
T ss_pred Hh
Confidence 65
No 82
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.69 E-value=1.6e-15 Score=115.80 Aligned_cols=187 Identities=14% Similarity=0.143 Sum_probs=123.7
Q ss_pred CCCCceEEEEEccCCCCccchHHHhhcCCC-CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHH
Q 025145 30 KGKHQATIVWLHGLGDNGSSWSQLLESLPL-PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAH 108 (257)
Q Consensus 30 ~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~-~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 108 (257)
.....|+++++||+-+++.+|+.+.+.|+. -+..++++|.|.||.+..-. ..+. ..++.+
T Consensus 48 ~~~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~----------------~h~~---~~ma~d 108 (315)
T KOG2382|consen 48 NLERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKIT----------------VHNY---EAMAED 108 (315)
T ss_pred ccCCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCcccc----------------ccCH---HHHHHH
Confidence 335778999999999999999999999983 57899999999887654321 1123 344444
Q ss_pred HHHHhccCC---CCceEEEEEechhH-HHHHHHHHhccccCCCCCCCcccccceEEEe--cc-CCC--------------
Q 025145 109 IANLLSTEP---ADVKVGIGGFSMGA-AVALYSATCCALGRYGNGIPYYVNLRAVVGL--SG-WLP-------------- 167 (257)
Q Consensus 109 ~~~~~~~~~---~~~~i~l~G~S~Gg-~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~-~~~-------------- 167 (257)
+..+++... ...++.++|||||| .+++..+. ..|..+..+|.. +| .++
T Consensus 109 v~~Fi~~v~~~~~~~~~~l~GHsmGG~~~~m~~t~-----------~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~ 177 (315)
T KOG2382|consen 109 VKLFIDGVGGSTRLDPVVLLGHSMGGVKVAMAETL-----------KKPDLIERLIVEDISPGGVGRSYGEYRELIKAMI 177 (315)
T ss_pred HHHHHHHcccccccCCceecccCcchHHHHHHHHH-----------hcCcccceeEEEecCCccCCcccchHHHHHHHHH
Confidence 444444432 23499999999999 44444443 335555555543 22 100
Q ss_pred ---Cc--------------------h----hhhhccc----------------------c------chHHHhhhcCCCEE
Q 025145 168 ---GS--------------------R----NLRNKIE----------------------G------SHEAARRAASLPIL 192 (257)
Q Consensus 168 ---~~--------------------~----~~~~~~~----------------------~------~~~~~~~~~~~P~l 192 (257)
.. . .+...+. . ...........||+
T Consensus 178 ~~d~~~~~~~~rke~~~~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvl 257 (315)
T KOG2382|consen 178 QLDLSIGVSRGRKEALKSLIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVL 257 (315)
T ss_pred hccccccccccHHHHHHHHHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhccccccccccccccee
Confidence 00 0 0000000 0 00001134578999
Q ss_pred EEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025145 193 LTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 193 ~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
+++|.++.+++.+.-.++.+.++ .+++++++++||+++.|.++.+.+-|.+++.
T Consensus 258 fi~g~~S~fv~~~~~~~~~~~fp-----~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~ 311 (315)
T KOG2382|consen 258 FIKGLQSKFVPDEHYPRMEKIFP-----NVEVHELDEAGHWVHLEKPEEFIESISEFLE 311 (315)
T ss_pred EEecCCCCCcChhHHHHHHHhcc-----chheeecccCCceeecCCHHHHHHHHHHHhc
Confidence 99999999999998888888887 6899999999999997777777666666544
No 83
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.67 E-value=1.4e-15 Score=108.50 Aligned_cols=167 Identities=17% Similarity=0.204 Sum_probs=112.6
Q ss_pred ceEEEEEccCCCCccc--hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025145 34 QATIVWLHGLGDNGSS--WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
..+||++||+-+++.. ...++..|++.|+.++.+|++|.|.+-.. |+.+.. ... ++++..
T Consensus 33 ~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gs-------f~~Gn~--------~~e---adDL~s 94 (269)
T KOG4667|consen 33 TEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGS-------FYYGNY--------NTE---ADDLHS 94 (269)
T ss_pred ceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCc-------cccCcc--------cch---HHHHHH
Confidence 4589999999998876 45588888889999999998877654321 222211 111 233333
Q ss_pred HhccCCCCce--EEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhcc-------------
Q 025145 112 LLSTEPADVK--VGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKI------------- 176 (257)
Q Consensus 112 ~~~~~~~~~~--i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~------------- 176 (257)
.++.....++ -+++|||-||-+++.++... .+ +.-+|-++|-+.....+.+.+
T Consensus 95 V~q~~s~~nr~v~vi~gHSkGg~Vvl~ya~K~-----------~d-~~~viNcsGRydl~~~I~eRlg~~~l~~ike~Gf 162 (269)
T KOG4667|consen 95 VIQYFSNSNRVVPVILGHSKGGDVVLLYASKY-----------HD-IRNVINCSGRYDLKNGINERLGEDYLERIKEQGF 162 (269)
T ss_pred HHHHhccCceEEEEEEeecCccHHHHHHHHhh-----------cC-chheEEcccccchhcchhhhhcccHHHHHHhCCc
Confidence 3333322223 36899999999999999953 33 555666666544333222111
Q ss_pred -----------------------ccch--HHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCC
Q 025145 177 -----------------------EGSH--EAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLG 231 (257)
Q Consensus 177 -----------------------~~~~--~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~ 231 (257)
.... ....-..+||||-+||..|.+||.+.+.++++.++ +.++.+++|++
T Consensus 163 id~~~rkG~y~~rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~-----nH~L~iIEgAD 237 (269)
T KOG4667|consen 163 IDVGPRKGKYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIP-----NHKLEIIEGAD 237 (269)
T ss_pred eecCcccCCcCceecHHHHHHHHhchhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhcc-----CCceEEecCCC
Confidence 0000 00112357999999999999999999999999998 55899999999
Q ss_pred CccC
Q 025145 232 HYTV 235 (257)
Q Consensus 232 H~~~ 235 (257)
|.+.
T Consensus 238 Hnyt 241 (269)
T KOG4667|consen 238 HNYT 241 (269)
T ss_pred cCcc
Confidence 9886
No 84
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.66 E-value=7.7e-15 Score=108.70 Aligned_cols=164 Identities=21% Similarity=0.217 Sum_probs=102.4
Q ss_pred CceEEEEEccCCCCccchHHHh--hcCC-CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025145 33 HQATIVWLHGLGDNGSSWSQLL--ESLP-LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~--~~l~-~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
+.|+||++||.+++...+.... ..++ +.||.|+.|+.... .....+..|+.. .......+...+..+++.+
T Consensus 15 ~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~----~~~~~cw~w~~~--~~~~g~~d~~~i~~lv~~v 88 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRR----ANPQGCWNWFSD--DQQRGGGDVAFIAALVDYV 88 (220)
T ss_pred CCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEccccccc----CCCCCccccccc--ccccCccchhhHHHHHHhH
Confidence 5699999999999988765421 2233 57999999985422 122344566551 1111122233333333333
Q ss_pred HHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc--------hhhhhccccch
Q 025145 110 ANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS--------RNLRNKIEGSH 180 (257)
Q Consensus 110 ~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------~~~~~~~~~~~ 180 (257)
..+. .+..||++.|+|.||.++..++. .+|+.|+++..++|..... ..+.......+
T Consensus 89 ---~~~~~iD~~RVyv~G~S~Gg~ma~~la~-----------~~pd~faa~a~~sG~~~~~a~~~~~a~~~m~~g~~~~p 154 (220)
T PF10503_consen 89 ---AARYNIDPSRVYVTGLSNGGMMANVLAC-----------AYPDLFAAVAVVSGVPYGCAASGASALSAMRSGPRPAP 154 (220)
T ss_pred ---hhhcccCCCceeeEEECHHHHHHHHHHH-----------hCCccceEEEeecccccccccCcccHHHHhhCCCCCCh
Confidence 3332 34569999999999999999998 4599999998887753211 00000000001
Q ss_pred HH-------HhhhcCCCEEEEccCCCCcccchhhHHHHHHhhh
Q 025145 181 EA-------ARRAASLPILLTHGLCDDVVPYKYGEKSANCLSI 216 (257)
Q Consensus 181 ~~-------~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~ 216 (257)
.. .......|++++||+.|.+|.+....++.+....
T Consensus 155 ~~~~~a~~~~g~~~~~P~~v~hG~~D~tV~~~n~~~~~~q~~~ 197 (220)
T PF10503_consen 155 AAAWGARSDAGAYPGYPRIVFHGTADTTVNPQNADQLVAQWLN 197 (220)
T ss_pred HHHHHhhhhccCCCCCCEEEEecCCCCccCcchHHHHHHHHHH
Confidence 00 0012347999999999999999988888887764
No 85
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.64 E-value=1.2e-14 Score=105.32 Aligned_cols=158 Identities=22% Similarity=0.274 Sum_probs=103.1
Q ss_pred EEEEccCCCCccchHH--HhhcCCC--CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025145 37 IVWLHGLGDNGSSWSQ--LLESLPL--PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 37 vi~~HG~~~~~~~~~~--~~~~l~~--~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
||++||+.++...... +.+.++. ....+.++++|. .....+..+.++
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~-----------------------------~p~~a~~~l~~~ 52 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPP-----------------------------FPEEAIAQLEQL 52 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCc-----------------------------CHHHHHHHHHHH
Confidence 7999999998877543 3444442 346777777652 114446666777
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccc------------h
Q 025145 113 LSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGS------------H 180 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~------------~ 180 (257)
+++.... .+.|+|.||||+.|..++.+. .+.+ |++.|.+.....+...+... .
T Consensus 53 i~~~~~~-~~~liGSSlGG~~A~~La~~~-------------~~~a-vLiNPav~p~~~l~~~iG~~~~~~~~e~~~~~~ 117 (187)
T PF05728_consen 53 IEELKPE-NVVLIGSSLGGFYATYLAERY-------------GLPA-VLINPAVRPYELLQDYIGEQTNPYTGESYELTE 117 (187)
T ss_pred HHhCCCC-CeEEEEEChHHHHHHHHHHHh-------------CCCE-EEEcCCCCHHHHHHHhhCccccCCCCccceech
Confidence 7766544 599999999999999999843 3444 66777655444333322110 0
Q ss_pred HH---------HhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC--HHHHHHHHHHH
Q 025145 181 EA---------ARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV--PKEMDEVCNWL 246 (257)
Q Consensus 181 ~~---------~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l 246 (257)
.. .......++++++++.|++++++.+ .+..+ ....++.+|++|.+. .+.+..|++|+
T Consensus 118 ~~~~~l~~l~~~~~~~~~~~lvll~~~DEvLd~~~a---~~~~~-----~~~~~i~~ggdH~f~~f~~~l~~i~~f~ 186 (187)
T PF05728_consen 118 EHIEELKALEVPYPTNPERYLVLLQTGDEVLDYREA---VAKYR-----GCAQIIEEGGDHSFQDFEEYLPQIIAFL 186 (187)
T ss_pred HhhhhcceEeccccCCCccEEEEEecCCcccCHHHH---HHHhc-----CceEEEEeCCCCCCccHHHHHHHHHHhh
Confidence 00 1123356899999999999998554 44444 234456677899987 66778888886
No 86
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.62 E-value=1.3e-14 Score=101.95 Aligned_cols=172 Identities=19% Similarity=0.166 Sum_probs=115.0
Q ss_pred CCCceEEEEEcc---CCCCccc--hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025145 31 GKHQATIVWLHG---LGDNGSS--WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 31 ~~~~~~vi~~HG---~~~~~~~--~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
.+..|+.|.+|= ++++..+ -..+++.|.+.|+.++.+|+|+ .+.+.|. |+.+- -. .++
T Consensus 25 ~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRg--VG~S~G~-----fD~Gi---------GE-~~D 87 (210)
T COG2945 25 TPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRG--VGRSQGE-----FDNGI---------GE-LED 87 (210)
T ss_pred CCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccc--cccccCc-----ccCCc---------ch-HHH
Confidence 366788888887 4555554 3457788889999999999774 3333332 33221 11 333
Q ss_pred HHHHHHHhccCCCCceE-EEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHHh
Q 025145 106 AAHIANLLSTEPADVKV-GIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAAR 184 (257)
Q Consensus 106 ~~~~~~~~~~~~~~~~i-~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 184 (257)
+....++++......+. .|.|+|+|+++++.++.+. +.....+.+++.... ......
T Consensus 88 a~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~------------~e~~~~is~~p~~~~----------~dfs~l 145 (210)
T COG2945 88 AAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRR------------PEILVFISILPPINA----------YDFSFL 145 (210)
T ss_pred HHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhc------------ccccceeeccCCCCc----------hhhhhc
Confidence 44555666655544344 7899999999999999963 334445555443331 111223
Q ss_pred hhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC---HHHHHHHHHHHH
Q 025145 185 RAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV---PKEMDEVCNWLT 247 (257)
Q Consensus 185 ~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~---~~~~~~~~~~l~ 247 (257)
.....|.++++|+.|++++.....++.+.. +.+.+.+++++|++. .+..+.+.+|+.
T Consensus 146 ~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~~------~~~~i~i~~a~HFF~gKl~~l~~~i~~~l~ 205 (210)
T COG2945 146 APCPSPGLVIQGDADDVVDLVAVLKWQESI------KITVITIPGADHFFHGKLIELRDTIADFLE 205 (210)
T ss_pred cCCCCCceeEecChhhhhcHHHHHHhhcCC------CCceEEecCCCceecccHHHHHHHHHHHhh
Confidence 456889999999999998887766666552 678999999999998 444577777774
No 87
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.61 E-value=9.1e-14 Score=94.64 Aligned_cols=175 Identities=21% Similarity=0.158 Sum_probs=113.3
Q ss_pred EeCCCCCCceEEEEEccCCCCccc--hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHH
Q 025145 26 VVRPKGKHQATIVWLHGLGDNGSS--WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLD 103 (257)
Q Consensus 26 ~~~~~~~~~~~vi~~HG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 103 (257)
...+.+++..+||+-||.|.+.++ +...+..|+..|+.|+.+++|++-.....+ ..+.+....--.
T Consensus 6 ~~~pag~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~------------rkPp~~~~t~~~ 73 (213)
T COG3571 6 LFDPAGPAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGR------------RKPPPGSGTLNP 73 (213)
T ss_pred ccCCCCCCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccC------------CCCcCccccCCH
Confidence 446777778899999999988775 567888899999999999988642211110 011111111112
Q ss_pred HHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEec-cCCCCchhhhhccccchHH
Q 025145 104 ASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLS-GWLPGSRNLRNKIEGSHEA 182 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~ 182 (257)
..+..+.++-.... ..++++-|+||||.++..++... ...|.++++++ |+.|.-+... ....
T Consensus 74 ~~~~~~aql~~~l~-~gpLi~GGkSmGGR~aSmvade~-----------~A~i~~L~clgYPfhppGKPe~-----~Rt~ 136 (213)
T COG3571 74 EYIVAIAQLRAGLA-EGPLIIGGKSMGGRVASMVADEL-----------QAPIDGLVCLGYPFHPPGKPEQ-----LRTE 136 (213)
T ss_pred HHHHHHHHHHhccc-CCceeeccccccchHHHHHHHhh-----------cCCcceEEEecCccCCCCCccc-----chhh
Confidence 23333334333332 23899999999999999999843 44588988885 3333322111 1122
Q ss_pred HhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC
Q 025145 183 ARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV 235 (257)
Q Consensus 183 ~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 235 (257)
....+++|++|.+|+.|++-..+.+..+ .+. ..++++++.+++|.+-
T Consensus 137 HL~gl~tPtli~qGtrD~fGtr~~Va~y--~ls----~~iev~wl~~adHDLk 183 (213)
T COG3571 137 HLTGLKTPTLITQGTRDEFGTRDEVAGY--ALS----DPIEVVWLEDADHDLK 183 (213)
T ss_pred hccCCCCCeEEeecccccccCHHHHHhh--hcC----CceEEEEeccCccccc
Confidence 3345689999999999999877665222 222 2689999999999764
No 88
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.61 E-value=1.6e-14 Score=110.31 Aligned_cols=195 Identities=19% Similarity=0.193 Sum_probs=119.7
Q ss_pred CCCCCceEEEEEccCCCCccc-h-HHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHH
Q 025145 29 PKGKHQATIVWLHGLGDNGSS-W-SQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASA 106 (257)
Q Consensus 29 ~~~~~~~~vi~~HG~~~~~~~-~-~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 106 (257)
+....+|.||++||+.++..+ | +.+++.+.++||.+++++.||++........ .| ......++
T Consensus 70 p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~---~y------------h~G~t~D~ 134 (345)
T COG0429 70 PRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPR---LY------------HSGETEDI 134 (345)
T ss_pred ccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcc---ee------------cccchhHH
Confidence 555667999999998766654 4 4588888889999999999987543322111 01 11123445
Q ss_pred HHHHHHhccCCCCceEEEEEechhH-HHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc------------hh--
Q 025145 107 AHIANLLSTEPADVKVGIGGFSMGA-AVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS------------RN-- 171 (257)
Q Consensus 107 ~~~~~~~~~~~~~~~i~l~G~S~Gg-~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------------~~-- 171 (257)
..+.+.++....+.++..+|+|+|| +++..++... ....+.+.+.+|.+++.. ..
T Consensus 135 ~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg----------~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~ 204 (345)
T COG0429 135 RFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEG----------DDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYS 204 (345)
T ss_pred HHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhc----------cCcccceeeeeeCHHHHHHHHHHhcCchhhhhhH
Confidence 5666666655555699999999999 5555555432 122334443333221100 00
Q ss_pred ------h-------------------hhcc----------------------------ccchHHHhhhcCCCEEEEccCC
Q 025145 172 ------L-------------------RNKI----------------------------EGSHEAARRAASLPILLTHGLC 198 (257)
Q Consensus 172 ------~-------------------~~~~----------------------------~~~~~~~~~~~~~P~l~~~G~~ 198 (257)
+ ...+ ..........+.+|+||||+.+
T Consensus 205 r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~D 284 (345)
T COG0429 205 RYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKD 284 (345)
T ss_pred HHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccccccceEEEecCC
Confidence 0 0000 0001113466889999999999
Q ss_pred CCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC-------HH--HHHHHHHHHHHhcCc
Q 025145 199 DDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV-------PK--EMDEVCNWLTARLGL 252 (257)
Q Consensus 199 D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-------~~--~~~~~~~~l~~~l~~ 252 (257)
|++++.+.......... +++.+.+.+-+||.-. +. ..+++.+|+...++.
T Consensus 285 DP~~~~~~iP~~~~~~n----p~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~~~ 343 (345)
T COG0429 285 DPFMPPEVIPKLQEMLN----PNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFLEA 343 (345)
T ss_pred CCCCChhhCCcchhcCC----CceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHHhh
Confidence 99999877665555432 2788888888899432 21 237889999887653
No 89
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.61 E-value=2.9e-14 Score=118.76 Aligned_cols=181 Identities=12% Similarity=0.040 Sum_probs=112.2
Q ss_pred ceEEeCCCCC--CceEEEEEccCCCCccchH-----HHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCC
Q 025145 23 RTHVVRPKGK--HQATIVWLHGLGDNGSSWS-----QLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDG 95 (257)
Q Consensus 23 ~~~~~~~~~~--~~~~vi~~HG~~~~~~~~~-----~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~ 95 (257)
..+.|.|..+ ..++||++|++......+. .+++.|.++||.|+++|++++|.+... .
T Consensus 175 eLi~Y~P~t~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~----------------~ 238 (532)
T TIGR01838 175 QLIQYEPTTETVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQAD----------------K 238 (532)
T ss_pred EEEEeCCCCCcCCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCccccc----------------C
Confidence 3455555532 5679999999887766654 789999889999999999876533211 0
Q ss_pred CCchhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHH----HHHhccccCCCCCCCcccccceEEEeccCCCCchh
Q 025145 96 PEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALY----SATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN 171 (257)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 171 (257)
....+........+..+.+ .....++.++||||||.++.. ++.. ..+++++++++++..++..+.
T Consensus 239 ~~ddY~~~~i~~al~~v~~-~~g~~kv~lvG~cmGGtl~a~ala~~aa~----------~~~~rv~slvll~t~~Df~~~ 307 (532)
T TIGR01838 239 TFDDYIRDGVIAALEVVEA-ITGEKQVNCVGYCIGGTLLSTALAYLAAR----------GDDKRIKSATFFTTLLDFSDP 307 (532)
T ss_pred ChhhhHHHHHHHHHHHHHH-hcCCCCeEEEEECcCcHHHHHHHHHHHHh----------CCCCccceEEEEecCcCCCCc
Confidence 0011111122223333322 223348999999999998632 2332 125578888777654321100
Q ss_pred --------------hhh-----------------------------------------------ccccc-----------
Q 025145 172 --------------LRN-----------------------------------------------KIEGS----------- 179 (257)
Q Consensus 172 --------------~~~-----------------------------------------------~~~~~----------- 179 (257)
+.. +....
T Consensus 308 G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~ 387 (532)
T TIGR01838 308 GELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFY 387 (532)
T ss_pred chhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHH
Confidence 000 00000
Q ss_pred -------------------hHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC
Q 025145 180 -------------------HEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV 235 (257)
Q Consensus 180 -------------------~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 235 (257)
.......+++|+++++|++|.++|.+.+..+.+.+. +.+..+++++||...
T Consensus 388 lr~ly~~N~L~~G~~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~-----~~~~~vL~~sGHi~~ 457 (532)
T TIGR01838 388 LRNLYLQNALTTGGLEVCGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALLG-----GPKTFVLGESGHIAG 457 (532)
T ss_pred HHHHHhcCCCcCCeeEECCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCC-----CCEEEEECCCCCchH
Confidence 001345678999999999999999999988888876 346678888999654
No 90
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.61 E-value=2.2e-14 Score=129.84 Aligned_cols=184 Identities=14% Similarity=0.146 Sum_probs=117.7
Q ss_pred CceEEEEEccCCCCccchHHH-----hhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHH
Q 025145 33 HQATIVWLHGLGDNGSSWSQL-----LESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAA 107 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~-----~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 107 (257)
..++||++||++.+...|+.. .+.|.+.||+|+++|+. .+.. .......++.+.+.
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~G---~~~~----------------~~~~~~~~l~~~i~ 126 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDFG---SPDK----------------VEGGMERNLADHVV 126 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcCC---CCCh----------------hHcCccCCHHHHHH
Confidence 457999999999999999754 67787789999999942 0000 00000133444444
Q ss_pred HHHHHhcc---CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc---------------
Q 025145 108 HIANLLST---EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS--------------- 169 (257)
Q Consensus 108 ~~~~~~~~---~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------------- 169 (257)
.+.+.++. ... .++.++||||||.+++.+++..+ +++++.+++++..+...
T Consensus 127 ~l~~~l~~v~~~~~-~~v~lvG~s~GG~~a~~~aa~~~----------~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~ 195 (994)
T PRK07868 127 ALSEAIDTVKDVTG-RDVHLVGYSQGGMFCYQAAAYRR----------SKDIASIVTFGSPVDTLAALPMGIPAGLAAAA 195 (994)
T ss_pred HHHHHHHHHHHhhC-CceEEEEEChhHHHHHHHHHhcC----------CCccceEEEEecccccCCCCcccchhhhhhcc
Confidence 45444432 222 38999999999999998886421 33555555432211000
Q ss_pred ---------------------------------------------hhh------hhccccc--------------hH---
Q 025145 170 ---------------------------------------------RNL------RNKIEGS--------------HE--- 181 (257)
Q Consensus 170 ---------------------------------------------~~~------~~~~~~~--------------~~--- 181 (257)
+.. ....... ..
T Consensus 196 ~~~~~~~~~~~~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~ 275 (994)
T PRK07868 196 ADFMADHVFNRLDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIA 275 (994)
T ss_pred cccchhhhhhcCCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHH
Confidence 000 0000000 00
Q ss_pred ---------------HHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEE-EEecCCCCcc-------CHHH
Q 025145 182 ---------------AARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTF-KSFEGLGHYT-------VPKE 238 (257)
Q Consensus 182 ---------------~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~-~~~~g~~H~~-------~~~~ 238 (257)
.....+++|+|+++|++|.++|++.++.+.+.++ +.++ .+++++||.. ..+.
T Consensus 276 ~n~~~~g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~-----~a~~~~~~~~~GH~g~~~g~~a~~~~ 350 (994)
T PRK07868 276 HNRMMTGGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAAP-----NAEVYESLIRAGHFGLVVGSRAAQQT 350 (994)
T ss_pred hCcccCceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCC-----CCeEEEEeCCCCCEeeeechhhhhhh
Confidence 0134667899999999999999999999988886 4455 5668889984 3667
Q ss_pred HHHHHHHHHHhcC
Q 025145 239 MDEVCNWLTARLG 251 (257)
Q Consensus 239 ~~~~~~~l~~~l~ 251 (257)
+..+.+||.+.-.
T Consensus 351 wp~i~~wl~~~~~ 363 (994)
T PRK07868 351 WPTVADWVKWLEG 363 (994)
T ss_pred ChHHHHHHHHhcc
Confidence 8999999988643
No 91
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.60 E-value=1.5e-14 Score=109.67 Aligned_cols=154 Identities=23% Similarity=0.213 Sum_probs=106.2
Q ss_pred eEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhc
Q 025145 62 IKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 62 ~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
|.|+++|.||.|.+... | ..........+.+..+..+++..... ++.++||||||.+++.++.+
T Consensus 1 f~vi~~d~rG~g~S~~~------~--------~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~vG~S~Gg~~~~~~a~~- 64 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPH------W--------DPDFPDYTTDDLAADLEALREALGIK-KINLVGHSMGGMLALEYAAQ- 64 (230)
T ss_dssp EEEEEEECTTSTTSSSC------C--------GSGSCTHCHHHHHHHHHHHHHHHTTS-SEEEEEETHHHHHHHHHHHH-
T ss_pred CEEEEEeCCCCCCCCCC------c--------cCCcccccHHHHHHHHHHHHHHhCCC-CeEEEEECCChHHHHHHHHH-
Confidence 68999999987654421 0 01222344555566666666554444 69999999999999999995
Q ss_pred cccCCCCCCCcccccceEEEeccCC--CC--c-hhhh-----hcc-----------------------------------
Q 025145 142 ALGRYGNGIPYYVNLRAVVGLSGWL--PG--S-RNLR-----NKI----------------------------------- 176 (257)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~i~~~~~~--~~--~-~~~~-----~~~----------------------------------- 176 (257)
+|+++++++++++.. +. . .... ...
T Consensus 65 ----------~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (230)
T PF00561_consen 65 ----------YPERVKKLVLISPPPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFL 134 (230)
T ss_dssp ----------SGGGEEEEEEESESSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHH
T ss_pred ----------CchhhcCcEEEeeeccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchh
Confidence 489999999998840 00 0 0000 000
Q ss_pred ---------c--------------------cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEe
Q 025145 177 ---------E--------------------GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSF 227 (257)
Q Consensus 177 ---------~--------------------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~ 227 (257)
. .........+++|+++++|++|.++|++....+.+.++ +.+++++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~-----~~~~~~~ 209 (230)
T PF00561_consen 135 KQFQSQQYARFAETDAFDNMFWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIP-----NSQLVLI 209 (230)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHST-----TEEEEEE
T ss_pred hccchhhhhHHHHHHHHhhhccccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcC-----CCEEEEC
Confidence 0 00001334589999999999999999999998888887 6789999
Q ss_pred cCCCCccCHHHHHHHHHHH
Q 025145 228 EGLGHYTVPKEMDEVCNWL 246 (257)
Q Consensus 228 ~g~~H~~~~~~~~~~~~~l 246 (257)
++.||....+..+.+.+-|
T Consensus 210 ~~~GH~~~~~~~~~~~~~i 228 (230)
T PF00561_consen 210 EGSGHFAFLEGPDEFNEII 228 (230)
T ss_dssp TTCCSTHHHHSHHHHHHHH
T ss_pred CCCChHHHhcCHHhhhhhh
Confidence 9999999877766666554
No 92
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.60 E-value=1.1e-13 Score=110.07 Aligned_cols=188 Identities=16% Similarity=0.118 Sum_probs=119.5
Q ss_pred CCceEEEEEccCCCC---ccch-HHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHH
Q 025145 32 KHQATIVWLHGLGDN---GSSW-SQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAA 107 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~---~~~~-~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 107 (257)
...|+||++||.+.. .... ..+...+...|+.|+++|+|.-+. ...+...++..+.+.
T Consensus 77 ~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe------------------~~~p~~~~d~~~a~~ 138 (312)
T COG0657 77 ATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPE------------------HPFPAALEDAYAAYR 138 (312)
T ss_pred CCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCC------------------CCCCchHHHHHHHHH
Confidence 357999999997643 3334 334444556899999999874221 122333444444555
Q ss_pred HHHHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh---------------
Q 025145 108 HIANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN--------------- 171 (257)
Q Consensus 108 ~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--------------- 171 (257)
++.+...+. .+.++|+|+|+|.||.+++.++...... -.....+.+++++++.....
T Consensus 139 ~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~-------~~~~p~~~~li~P~~d~~~~~~~~~~~~~~~~~~~ 211 (312)
T COG0657 139 WLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDR-------GLPLPAAQVLISPLLDLTSSAASLPGYGEADLLDA 211 (312)
T ss_pred HHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhc-------CCCCceEEEEEecccCCcccccchhhcCCccccCH
Confidence 555444332 3346999999999999999999864110 12356777778877554420
Q ss_pred ------hhhcc-c-----c----chHHHh-hhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCcc
Q 025145 172 ------LRNKI-E-----G----SHEAAR-RAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYT 234 (257)
Q Consensus 172 ------~~~~~-~-----~----~~~~~~-~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~ 234 (257)
+...+ . . .+.... ...-.|+++++|+.|.+.+ ++..+.++++++|+ .+++..++|+.|.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~p~~spl~~~~~~~lPP~~i~~a~~D~l~~--~~~~~a~~L~~agv-~~~~~~~~g~~H~f 288 (312)
T COG0657 212 AAILAWFADLYLGAAPDREDPEASPLASDDLSGLPPTLIQTAEFDPLRD--EGEAYAERLRAAGV-PVELRVYPGMIHGF 288 (312)
T ss_pred HHHHHHHHHHhCcCccccCCCccCccccccccCCCCEEEEecCCCcchh--HHHHHHHHHHHcCC-eEEEEEeCCcceec
Confidence 00000 0 0 000000 1115789999999999987 78899999999999 88999999999977
Q ss_pred C-------HHHHHHHHHHHH
Q 025145 235 V-------PKEMDEVCNWLT 247 (257)
Q Consensus 235 ~-------~~~~~~~~~~l~ 247 (257)
. .+.+..+.+|+.
T Consensus 289 ~~~~~~~a~~~~~~~~~~l~ 308 (312)
T COG0657 289 DLLTGPEARSALRQIAAFLR 308 (312)
T ss_pred cccCcHHHHHHHHHHHHHHH
Confidence 3 223455556655
No 93
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.59 E-value=1.4e-13 Score=108.02 Aligned_cols=191 Identities=16% Similarity=0.141 Sum_probs=127.8
Q ss_pred CCceEEEEEccCCCC-----ccchHHHhhcCC-CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025145 32 KHQATIVWLHGLGDN-----GSSWSQLLESLP-LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~-----~~~~~~~~~~l~-~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
...|+|||+||.|.. ...|..+...++ ..+..|+++|+|.-+. ...+...++.-..
T Consensus 88 ~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPE------------------h~~Pa~y~D~~~A 149 (336)
T KOG1515|consen 88 TKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPE------------------HPFPAAYDDGWAA 149 (336)
T ss_pred cCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCC------------------CCCCccchHHHHH
Confidence 367999999997743 334677777664 5799999999774221 1223334444555
Q ss_pred HHHHHH--HhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhcc-------
Q 025145 106 AAHIAN--LLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKI------- 176 (257)
Q Consensus 106 ~~~~~~--~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~------- 176 (257)
+.++.+ +++...+.++++|+|-|.||.+|..++.+..... ..+.++++.|++.|++...+......
T Consensus 150 l~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~-----~~~~ki~g~ili~P~~~~~~~~~~e~~~~~~~~ 224 (336)
T KOG1515|consen 150 LKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEK-----LSKPKIKGQILIYPFFQGTDRTESEKQQNLNGS 224 (336)
T ss_pred HHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhcc-----CCCcceEEEEEEecccCCCCCCCHHHHHhhcCC
Confidence 555554 5555566679999999999999999998753211 23678999999998754332111100
Q ss_pred ----------------cc----------chH------HHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEE
Q 025145 177 ----------------EG----------SHE------AARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTF 224 (257)
Q Consensus 177 ----------------~~----------~~~------~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~ 224 (257)
.. .+. ......-.|++++.++.|.+. +.+..++++|++.|+ ++++
T Consensus 225 ~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~--D~~~~Y~~~Lkk~Gv-~v~~ 301 (336)
T KOG1515|consen 225 PELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLR--DEGLAYAEKLKKAGV-EVTL 301 (336)
T ss_pred cchhHHHHHHHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEEEeCchhhh--hhhHHHHHHHHHcCC-eEEE
Confidence 00 000 011122346999999999885 678889999999999 7888
Q ss_pred EEecCCCCccC---------HHHHHHHHHHHHH
Q 025145 225 KSFEGLGHYTV---------PKEMDEVCNWLTA 248 (257)
Q Consensus 225 ~~~~g~~H~~~---------~~~~~~~~~~l~~ 248 (257)
+.++++.|.+. .+..+.+.+|+.+
T Consensus 302 ~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~ 334 (336)
T KOG1515|consen 302 IHYEDGFHGFHILDPSSKEAHALMDAIVEFIKS 334 (336)
T ss_pred EEECCCeeEEEecCCchhhHHHHHHHHHHHHhh
Confidence 89999999765 2345677777765
No 94
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.59 E-value=4.8e-15 Score=111.21 Aligned_cols=171 Identities=18% Similarity=0.170 Sum_probs=103.5
Q ss_pred EEEEccCCCC---ccchHHHhhcCCC-CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025145 37 IVWLHGLGDN---GSSWSQLLESLPL-PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 37 vi~~HG~~~~---~~~~~~~~~~l~~-~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
||++||.+.. ......++..++. .|+.|+.+|+|.-+ ....+...+++.+.+.++.+.
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p------------------~~~~p~~~~D~~~a~~~l~~~ 62 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAP------------------EAPFPAALEDVKAAYRWLLKN 62 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TT------------------TSSTTHHHHHHHHHHHHHHHT
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccc------------------cccccccccccccceeeeccc
Confidence 7999997744 3344556666664 79999999976311 111122233333333333333
Q ss_pred hcc-CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCC-c---hhh------hh--cc---
Q 025145 113 LST-EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPG-S---RNL------RN--KI--- 176 (257)
Q Consensus 113 ~~~-~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~---~~~------~~--~~--- 176 (257)
..+ ..+.++|+|+|+|.||.+++.++.+.... ....++++++++|+... . ... .+ .+
T Consensus 63 ~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~-------~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~~ 135 (211)
T PF07859_consen 63 ADKLGIDPERIVLIGDSAGGHLALSLALRARDR-------GLPKPKGIILISPWTDLQDFDGPSYDDSNENKDDPFLPAP 135 (211)
T ss_dssp HHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHT-------TTCHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSSSBHH
T ss_pred cccccccccceEEeecccccchhhhhhhhhhhh-------cccchhhhhcccccccchhccccccccccccccccccccc
Confidence 221 23446999999999999999999864211 02348999999998644 1 111 00 00
Q ss_pred ---------c-c----ch----HHH-hhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC
Q 025145 177 ---------E-G----SH----EAA-RRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV 235 (257)
Q Consensus 177 ---------~-~----~~----~~~-~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 235 (257)
. . .+ ... ....-.|+++++|+.|.++ +.+..+++++++.|+ ++++++++|..|.+.
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~Pp~~i~~g~~D~l~--~~~~~~~~~L~~~gv-~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 136 KIDWFWKLYLPGSDRDDPLASPLNASDLKGLPPTLIIHGEDDVLV--DDSLRFAEKLKKAGV-DVELHVYPGMPHGFF 210 (211)
T ss_dssp HHHHHHHHHHSTGGTTSTTTSGGGSSCCTTCHEEEEEEETTSTTH--HHHHHHHHHHHHTT--EEEEEEETTEETTGG
T ss_pred ccccccccccccccccccccccccccccccCCCeeeeccccccch--HHHHHHHHHHHHCCC-CEEEEEECCCeEEee
Confidence 0 0 00 000 1112358999999999875 467899999999998 899999999999764
No 95
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.58 E-value=9.5e-14 Score=120.78 Aligned_cols=199 Identities=15% Similarity=0.149 Sum_probs=130.4
Q ss_pred CCCceEEEEEccCCCCcc-------chHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHH
Q 025145 31 GKHQATIVWLHGLGDNGS-------SWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLD 103 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~-------~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 103 (257)
.++.|+|+.+||..++.. +|... .....|+.|+.+|.||.| .. |.....+. ........+.
T Consensus 523 ~~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~--~~-G~~~~~~~-------~~~lG~~ev~ 590 (755)
T KOG2100|consen 523 SKKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSG--GY-GWDFRSAL-------PRNLGDVEVK 590 (755)
T ss_pred CCCCCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcC--Cc-chhHHHHh-------hhhcCCcchH
Confidence 457799999999886332 23333 345689999999977532 11 11110100 0111123345
Q ss_pred HHHHHHHHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcc-cccceEEEeccCCCCch---hhhhcc--
Q 025145 104 ASAAHIANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYY-VNLRAVVGLSGWLPGSR---NLRNKI-- 176 (257)
Q Consensus 104 ~~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~---~~~~~~-- 176 (257)
+....+..+++.. .+..+|.++|+|.||++++.++... + .-++..++++|...... ...++.
T Consensus 591 D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~-----------~~~~fkcgvavaPVtd~~~yds~~terymg 659 (755)
T KOG2100|consen 591 DQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESD-----------PGDVFKCGVAVAPVTDWLYYDSTYTERYMG 659 (755)
T ss_pred HHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhC-----------cCceEEEEEEecceeeeeeecccccHhhcC
Confidence 5555555566554 3346999999999999999999853 4 45666688887533220 000000
Q ss_pred ----------ccchHHHhhhcCCC-EEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC-----HHHHH
Q 025145 177 ----------EGSHEAARRAASLP-ILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV-----PKEMD 240 (257)
Q Consensus 177 ----------~~~~~~~~~~~~~P-~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-----~~~~~ 240 (257)
..........++.| .|++||+.|..|+.+++..+.+.|+.+|+ +.+..++|+.+|.+. .....
T Consensus 660 ~p~~~~~~y~e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv-~~~~~vypde~H~is~~~~~~~~~~ 738 (755)
T KOG2100|consen 660 LPSENDKGYEESSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGV-PFRLLVYPDENHGISYVEVISHLYE 738 (755)
T ss_pred CCccccchhhhccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCC-ceEEEEeCCCCcccccccchHHHHH
Confidence 01111233444455 59999999999999999999999999999 699999999999886 34578
Q ss_pred HHHHHHHHhcCcC
Q 025145 241 EVCNWLTARLGLE 253 (257)
Q Consensus 241 ~~~~~l~~~l~~~ 253 (257)
.+..|+.+.+...
T Consensus 739 ~~~~~~~~~~~~~ 751 (755)
T KOG2100|consen 739 KLDRFLRDCFGSP 751 (755)
T ss_pred HHHHHHHHHcCcc
Confidence 8999999776543
No 96
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.57 E-value=4.7e-13 Score=100.28 Aligned_cols=191 Identities=18% Similarity=0.138 Sum_probs=123.8
Q ss_pred CCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHH
Q 025145 29 PKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAH 108 (257)
Q Consensus 29 ~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 108 (257)
|.+.+..+||-+||..++..+|+.+...|.+.|++++..++||.|... + .+....+-.+....
T Consensus 30 ~~gs~~gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~--~---------------~~~~~~~n~er~~~ 92 (297)
T PF06342_consen 30 PSGSPLGTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTP--G---------------YPDQQYTNEERQNF 92 (297)
T ss_pred CCCCCceeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCC--C---------------CcccccChHHHHHH
Confidence 455666799999999999999999999999999999999999654322 1 11122233445566
Q ss_pred HHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCC--------CCc-----hhhhhc
Q 025145 109 IANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWL--------PGS-----RNLRNK 175 (257)
Q Consensus 109 ~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--------~~~-----~~~~~~ 175 (257)
+..+++.....+++.++|||.|+-.|+.++... +..+++++++.- |.. ..+...
T Consensus 93 ~~~ll~~l~i~~~~i~~gHSrGcenal~la~~~-------------~~~g~~lin~~G~r~HkgIrp~~r~~~i~~l~~~ 159 (297)
T PF06342_consen 93 VNALLDELGIKGKLIFLGHSRGCENALQLAVTH-------------PLHGLVLINPPGLRPHKGIRPLSRMETINYLYDL 159 (297)
T ss_pred HHHHHHHcCCCCceEEEEeccchHHHHHHHhcC-------------ccceEEEecCCccccccCcCHHHHHHHHHHHHHH
Confidence 666777665567999999999999999999842 356777776531 000 000000
Q ss_pred cc----------------------------------------cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhh
Q 025145 176 IE----------------------------------------GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLS 215 (257)
Q Consensus 176 ~~----------------------------------------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~ 215 (257)
+. .......+..++|+++++|.+|.++-.+...++.+.++
T Consensus 160 lp~~~~~~i~~~~y~~iG~KV~~GeeA~na~r~m~~~df~~q~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f~ 239 (297)
T PF06342_consen 160 LPRFIINAIMYFYYRMIGFKVSDGEEAINAMRSMQNCDFEEQKEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKFK 239 (297)
T ss_pred hhHHHHHHHHHHHHHHhCeeecChHHHHHHHHHHHhcCHHHHHHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHhC
Confidence 00 00001234456999999999999988776666655554
Q ss_pred hc-----------------------CceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025145 216 IS-----------------------GFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 216 ~~-----------------------~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
.. +. .-..+.+...||+......+.+.+-+.+.|
T Consensus 240 ~l~Hf~~~~~~seee~~kI~~~f~~~~-~~~sv~f~~dgHf~qK~~A~lIA~~i~~mf 296 (297)
T PF06342_consen 240 GLDHFNIEKEISEEEKPKILKSFASGQ-KGASVFFAKDGHFQQKFRADLIAEAIKKMF 296 (297)
T ss_pred CccceeeecCCChhHHHHHHHHHhcCC-ceeEEEEecCChHHhHHHHHHHHHHHHHhh
Confidence 20 11 122344445588877666666666555543
No 97
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.56 E-value=9.5e-14 Score=103.92 Aligned_cols=174 Identities=20% Similarity=0.210 Sum_probs=111.6
Q ss_pred ceEEEEEccCCCCccchHH-HhhcC-------CCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025145 34 QATIVWLHGLGDNGSSWSQ-LLESL-------PLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~-~~~~l-------~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
.|.|||+||.|....+-.. +...+ .+.++-|++|.+- ..-... ...........
T Consensus 191 ~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~----------------~if~d~--e~~t~~~l~~~ 252 (387)
T COG4099 191 YPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYN----------------PIFADS--EEKTLLYLIEK 252 (387)
T ss_pred ccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccc----------------cccccc--ccccchhHHHH
Confidence 4999999999987765332 22211 1334455555411 110111 11223344555
Q ss_pred HHHHHHHhccC-C-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHH
Q 025145 106 AAHIANLLSTE-P-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAA 183 (257)
Q Consensus 106 ~~~~~~~~~~~-~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 183 (257)
++.+.+.+... . +..||.++|.|+||+.++.++. ++|+.+++.+.++|--... ...
T Consensus 253 idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~-----------kfPdfFAaa~~iaG~~d~v-----------~lv 310 (387)
T COG4099 253 IDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAE-----------KFPDFFAAAVPIAGGGDRV-----------YLV 310 (387)
T ss_pred HHHHHHHHhhccCcccceEEEEeecCcchhhHHHHH-----------hCchhhheeeeecCCCchh-----------hhh
Confidence 66666444443 2 3469999999999999999999 5699999999998854321 122
Q ss_pred hhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEec-------CCCCccCH---HHHHHHHHHHHH
Q 025145 184 RRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFE-------GLGHYTVP---KEMDEVCNWLTA 248 (257)
Q Consensus 184 ~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~-------g~~H~~~~---~~~~~~~~~l~~ 248 (257)
....+.|++++|+.+|.++|.+.++-+++++++... ++.+..+. |..|.-.. -...++.+||-+
T Consensus 311 ~~lk~~piWvfhs~dDkv~Pv~nSrv~y~~lk~~~~-kv~Ytaf~~g~~~~eG~d~~g~w~atyn~~eaieWLl~ 384 (387)
T COG4099 311 RTLKKAPIWVFHSSDDKVIPVSNSRVLYERLKALDR-KVNYTAFLEGTTVLEGVDHSGVWWATYNDAEAIEWLLK 384 (387)
T ss_pred hhhccCceEEEEecCCCccccCcceeehHHHHhhcc-ccchhhhhhccccccccCCCCcceeecCCHHHHHHHHh
Confidence 335689999999999999999999999999987654 44544443 44443221 123567778754
No 98
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.55 E-value=1.7e-13 Score=101.79 Aligned_cols=93 Identities=17% Similarity=0.215 Sum_probs=68.0
Q ss_pred CCCceEEEEEccCCCCccchHHHhhcCC-CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025145 31 GKHQATIVWLHGLGDNGSSWSQLLESLP-LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~~~~~~~l~-~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
.+..|+++++||.|.+...|..++..+. ....+++++|+|+||.+...- .+.-+.+..++++
T Consensus 71 ~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~-----------------e~dlS~eT~~KD~ 133 (343)
T KOG2564|consen 71 ATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVEN-----------------EDDLSLETMSKDF 133 (343)
T ss_pred CCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCC-----------------hhhcCHHHHHHHH
Confidence 5677899999999999999999998886 457888999999997654321 1112334444555
Q ss_pred HHHhccCCC--CceEEEEEechhHHHHHHHHHh
Q 025145 110 ANLLSTEPA--DVKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 110 ~~~~~~~~~--~~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
..+++.... +.+|+|+||||||.++...+..
T Consensus 134 ~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~ 166 (343)
T KOG2564|consen 134 GAVIKELFGELPPQIILVGHSMGGAIAVHTAAS 166 (343)
T ss_pred HHHHHHHhccCCCceEEEeccccchhhhhhhhh
Confidence 455544322 2389999999999999988874
No 99
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.51 E-value=7.9e-13 Score=98.71 Aligned_cols=121 Identities=28% Similarity=0.345 Sum_probs=75.9
Q ss_pred CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch----------h---h-------------
Q 025145 119 DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR----------N---L------------- 172 (257)
Q Consensus 119 ~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----------~---~------------- 172 (257)
.++|+|+|.|.||-+|+.++.+. + .+.++|+++|..-... . +
T Consensus 21 ~~~Igi~G~SkGaelALllAs~~-----------~-~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~ 88 (213)
T PF08840_consen 21 PDKIGIIGISKGAELALLLASRF-----------P-QISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISKFSWNEPG 88 (213)
T ss_dssp -SSEEEEEETHHHHHHHHHHHHS-----------S-SEEEEEEES--SB--SSEEEETTE--EE----B-GGG-EE-TTS
T ss_pred CCCEEEEEECHHHHHHHHHHhcC-----------C-CccEEEEeCCceeEecchhcccCCCccCCcCCcChhhceecCCc
Confidence 35999999999999999999963 4 8999998876310000 0 0
Q ss_pred ----hhc-------cccchHHHhhhcCCCEEEEccCCCCcccch-hhHHHHHHhhhcCce-eeEEEEecCCCCccC----
Q 025145 173 ----RNK-------IEGSHEAARRAASLPILLTHGLCDDVVPYK-YGEKSANCLSISGFR-HLTFKSFEGLGHYTV---- 235 (257)
Q Consensus 173 ----~~~-------~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~-~~~~~~~~l~~~~~~-~~~~~~~~g~~H~~~---- 235 (257)
... ..........++++|+|++.|++|..+|.. .++.+.+++++++.+ +.+++.||++||.+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i~~Py~ 168 (213)
T PF08840_consen 89 LLRSRYAFELADDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHLIEPPYF 168 (213)
T ss_dssp -EE-TT-B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S---STT-
T ss_pred ceehhhhhhcccccccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCceecCCCC
Confidence 000 001111245667999999999999999855 457888899988763 578999999999642
Q ss_pred ----------------------------HHHHHHHHHHHHHhcC
Q 025145 236 ----------------------------PKEMDEVCNWLTARLG 251 (257)
Q Consensus 236 ----------------------------~~~~~~~~~~l~~~l~ 251 (257)
.+.++.+++||++.|.
T Consensus 169 P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 169 PHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp ----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 2358899999999875
No 100
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.49 E-value=1.2e-12 Score=98.35 Aligned_cols=181 Identities=17% Similarity=0.086 Sum_probs=112.3
Q ss_pred ceEEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhH
Q 025145 23 RTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGL 102 (257)
Q Consensus 23 ~~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~ 102 (257)
..++++......|+|||+||+.-....|..+.+.++..||.|+.+|.... .. ..........
T Consensus 6 l~v~~P~~~g~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~----------------~~--~~~~~~~~~~ 67 (259)
T PF12740_consen 6 LLVYYPSSAGTYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSI----------------GG--PDDTDEVASA 67 (259)
T ss_pred eEEEecCCCCCcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEeccccc----------------CC--CCcchhHHHH
Confidence 34455666677999999999997777789999999999999999994321 00 1112234445
Q ss_pred HHHHHHHHHHhccCC------CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch--hh-h
Q 025145 103 DASAAHIANLLSTEP------ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR--NL-R 173 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~------~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~-~ 173 (257)
.+.++++.+-+.... +-.+++|.|||.||-++..++..... .....++++++++.|.--... .. .
T Consensus 68 ~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~------~~~~~~~~ali~lDPVdG~~~~~~~~P 141 (259)
T PF12740_consen 68 AEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNAS------SSLDLRFSALILLDPVDGMSKGSQTEP 141 (259)
T ss_pred HHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcc------cccccceeEEEEeccccccccccCCCC
Confidence 555555544333321 12599999999999999999985310 011458999999987542111 11 0
Q ss_pred hccccchHHHhhhcCCCEEEEccCCCC---------cccch-hhHHHHHHhhhcCceeeEEEEecCCCCc
Q 025145 174 NKIEGSHEAARRAASLPILLTHGLCDD---------VVPYK-YGEKSANCLSISGFRHLTFKSFEGLGHY 233 (257)
Q Consensus 174 ~~~~~~~~~~~~~~~~P~l~~~G~~D~---------~v~~~-~~~~~~~~l~~~~~~~~~~~~~~g~~H~ 233 (257)
..+.. .......+.|++++-..-+. ..|.. .-+++++.++. ..-..+..+.||.
T Consensus 142 ~v~~~--~p~s~~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~----p~~~~v~~~~GH~ 205 (259)
T PF12740_consen 142 PVLTY--TPQSFDFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECKP----PSWHFVAKDYGHM 205 (259)
T ss_pred ccccC--cccccCCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcCC----CEEEEEeCCCCch
Confidence 11111 01112246999998766553 22222 23677777764 4456666889995
No 101
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=99.48 E-value=7.4e-13 Score=99.89 Aligned_cols=181 Identities=16% Similarity=0.168 Sum_probs=114.0
Q ss_pred CCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCccc--------CCCCcccccccCCCCCCCCC---C
Q 025145 29 PKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAI--------LGGFPCTAWFDVGELSDDGP---E 97 (257)
Q Consensus 29 ~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~--------~~g~~~~~w~~~~~~~~~~~---~ 97 (257)
+.+.+.|+|||.||.|++...|..+.-.|+.+||.|.++++|-+.... ..+.....|..+.....++. .
T Consensus 113 tk~~k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~i 192 (399)
T KOG3847|consen 113 TKNDKYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHI 192 (399)
T ss_pred CCCCCccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEe
Confidence 335678999999999999999999999999999999999988664322 12333455655543332222 1
Q ss_pred chhh---HHHHHHHHHHHhccC-----------------------CCCceEEEEEechhHHHHHHHHHhccccCCCCCCC
Q 025145 98 DWEG---LDASAAHIANLLSTE-----------------------PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIP 151 (257)
Q Consensus 98 ~~~~---~~~~~~~~~~~~~~~-----------------------~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~ 151 (257)
.-++ -...+....+++++. ....++.|+|||+||..++.....
T Consensus 193 rNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~----------- 261 (399)
T KOG3847|consen 193 RNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSS----------- 261 (399)
T ss_pred eCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcc-----------
Confidence 1111 111222222222211 111478999999999999988763
Q ss_pred cccccceEEEeccCCCCchhhhhccccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCC
Q 025145 152 YYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLG 231 (257)
Q Consensus 152 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~ 231 (257)
...++..|++.+|+-+.+... ....+-|+++|.-+ |... .+....+.+-.. .+. .-.++.+.|+=
T Consensus 262 -~t~FrcaI~lD~WM~Pl~~~~----------~~~arqP~~finv~-~fQ~-~en~~vmKki~~-~n~-g~~~it~~GsV 326 (399)
T KOG3847|consen 262 -HTDFRCAIALDAWMFPLDQLQ----------YSQARQPTLFINVE-DFQW-NENLLVMKKIES-QNE-GNHVITLDGSV 326 (399)
T ss_pred -ccceeeeeeeeeeecccchhh----------hhhccCCeEEEEcc-cccc-hhHHHHHHhhhC-CCc-cceEEEEccce
Confidence 568999999999875544322 23457899999833 3322 333333333333 322 34788899999
Q ss_pred CccC
Q 025145 232 HYTV 235 (257)
Q Consensus 232 H~~~ 235 (257)
|...
T Consensus 327 Hqnf 330 (399)
T KOG3847|consen 327 HQNF 330 (399)
T ss_pred eccc
Confidence 9654
No 102
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.46 E-value=2.7e-12 Score=101.68 Aligned_cols=193 Identities=16% Similarity=0.142 Sum_probs=116.6
Q ss_pred CCceEEEEEccCCCCccc-h-HHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025145 32 KHQATIVWLHGLGDNGSS-W-SQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~-~-~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
...|+||++||+.+++.. | +.++..+.+.||++++++.||.+-+.-... .-|. .....++..+
T Consensus 123 ~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTp---r~f~------------ag~t~Dl~~~ 187 (409)
T KOG1838|consen 123 GTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTP---RLFT------------AGWTEDLREV 187 (409)
T ss_pred CCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCC---ceee------------cCCHHHHHHH
Confidence 467999999998766553 3 346666667999999999987532211110 0111 1224445555
Q ss_pred HHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCC--chhhhhcc-----------
Q 025145 110 ANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPG--SRNLRNKI----------- 176 (257)
Q Consensus 110 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~----------- 176 (257)
.+.+++..+..+++.+|+||||.+.+.++.+.. ...+.++++...+||-.. .+.+....
T Consensus 188 v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g--------~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~l~~ 259 (409)
T KOG1838|consen 188 VNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEG--------DNTPLIAAVAVCNPWDLLAASRSIETPLYRRFYNRALTL 259 (409)
T ss_pred HHHHHHhCCCCceEEEEecchHHHHHHHhhhcc--------CCCCceeEEEEeccchhhhhhhHHhcccchHHHHHHHHH
Confidence 666666666669999999999999999998631 223455666666676321 00000000
Q ss_pred ---------------------------------------------------ccchHHHhhhcCCCEEEEccCCCCcccch
Q 025145 177 ---------------------------------------------------EGSHEAARRAASLPILLTHGLCDDVVPYK 205 (257)
Q Consensus 177 ---------------------------------------------------~~~~~~~~~~~~~P~l~~~G~~D~~v~~~ 205 (257)
..........+++|+|++++.+|+++|.+
T Consensus 260 ~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~~~v~~I~VP~L~ina~DDPv~p~~ 339 (409)
T KOG1838|consen 260 NLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASSSNYVDKIKVPLLCINAADDPVVPEE 339 (409)
T ss_pred hHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchhhhcccccccEEEEecCCCCCCCcc
Confidence 01111245678999999999999999986
Q ss_pred hhHHHHHHhhhcCceeeEEEEecCCCCccCHH--------HHHH-HHHHHHHhcC
Q 025145 206 YGEKSANCLSISGFRHLTFKSFEGLGHYTVPK--------EMDE-VCNWLTARLG 251 (257)
Q Consensus 206 ~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~--------~~~~-~~~~l~~~l~ 251 (257)
..- .+..++. +++-+.+-.-+||--.-+ ..++ +.+|+.....
T Consensus 340 ~ip--~~~~~~n--p~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~~~ 390 (409)
T KOG1838|consen 340 AIP--IDDIKSN--PNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNAIF 390 (409)
T ss_pred cCC--HHHHhcC--CcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHHHh
Confidence 431 2222222 266777777779943311 1344 7777766543
No 103
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.46 E-value=3.4e-13 Score=105.71 Aligned_cols=182 Identities=16% Similarity=0.155 Sum_probs=94.1
Q ss_pred CCceEEeCCC-CCCceEEEEEccCCCCccc--------------h----HHHhhcCCCCceEEEccCCCCCCcccCCCCc
Q 025145 21 FGRTHVVRPK-GKHQATIVWLHGLGDNGSS--------------W----SQLLESLPLPNIKWICPTAPTRPVAILGGFP 81 (257)
Q Consensus 21 ~~~~~~~~~~-~~~~~~vi~~HG~~~~~~~--------------~----~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~ 81 (257)
.+..++.+.. +.+.|+||++||-++.+.. + ..++..|+++||.|+++|.++-|........
T Consensus 101 vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~ 180 (390)
T PF12715_consen 101 VPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGA 180 (390)
T ss_dssp EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCC
T ss_pred EEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEcccccccccccccc
Confidence 3344444544 6788999999998766522 1 1256677899999999999876654332210
Q ss_pred ccccccCCCCCCCCCCchhhH---------------HHHHHHHHHHhccC--CCCceEEEEEechhHHHHHHHHHhcccc
Q 025145 82 CTAWFDVGELSDDGPEDWEGL---------------DASAAHIANLLSTE--PADVKVGIGGFSMGAAVALYSATCCALG 144 (257)
Q Consensus 82 ~~~w~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~ 144 (257)
.. ........+ ..+...+.++++.. .++++|+++|+||||+.++.+++.
T Consensus 181 ~~----------~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaAL---- 246 (390)
T PF12715_consen 181 AQ----------GSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAAL---- 246 (390)
T ss_dssp TT----------TTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH----
T ss_pred cc----------ccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHc----
Confidence 00 000001111 11122245677654 334699999999999999999985
Q ss_pred CCCCCCCcccccceEEEeccCCCCc-hh----------------------hhhc--cccchHHHhhhcCCCEEEEccCCC
Q 025145 145 RYGNGIPYYVNLRAVVGLSGWLPGS-RN----------------------LRNK--IEGSHEAARRAASLPILLTHGLCD 199 (257)
Q Consensus 145 ~~~~~~~~~~~~~~~i~~~~~~~~~-~~----------------------~~~~--~~~~~~~~~~~~~~P~l~~~G~~D 199 (257)
.++|++.+..+ ++... +. +... ....+.........|+|++.|..|
T Consensus 247 --------DdRIka~v~~~-~l~~~~~~~~~mt~~~~~~~~~~~~~~~~~iPgl~r~~D~PdIasliAPRPll~~nG~~D 317 (390)
T PF12715_consen 247 --------DDRIKATVANG-YLCTTQERALLMTMPNNNGLRGFPNCICNYIPGLWRYFDFPDIASLIAPRPLLFENGGKD 317 (390)
T ss_dssp ---------TT--EEEEES--B--HHHHHHHB----TTS----SS-GGG--TTCCCC--HHHHHHTTTTS-EEESS-B-H
T ss_pred --------chhhHhHhhhh-hhhccchhhHhhccccccccCcCcchhhhhCccHHhhCccHHHHHHhCCCcchhhcCCcc
Confidence 78888776543 32211 10 0000 012233344556789999999999
Q ss_pred CcccchhhHHHHHHhhhcCceeeEEEEecC
Q 025145 200 DVVPYKYGEKSANCLSISGFRHLTFKSFEG 229 (257)
Q Consensus 200 ~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g 229 (257)
..+|. ++..++....- .+++++.+|+
T Consensus 318 klf~i--V~~AY~~~~~p--~n~~~~~~p~ 343 (390)
T PF12715_consen 318 KLFPI--VRRAYAIMGAP--DNFQIHHYPK 343 (390)
T ss_dssp HHHHH--HHHHHHHTT-G--GGEEE---GG
T ss_pred cccHH--HHHHHHhcCCC--cceEEeeccc
Confidence 99876 66666665543 2789999885
No 104
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.46 E-value=2.8e-13 Score=109.23 Aligned_cols=177 Identities=15% Similarity=0.205 Sum_probs=85.2
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcc--cC--CCC-----------cccccccCCCCCCCCC
Q 025145 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVA--IL--GGF-----------PCTAWFDVGELSDDGP 96 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~--~~--~g~-----------~~~~w~~~~~~~~~~~ 96 (257)
...|+|||.||++++...|..++..|+.+||.|+++|+|..... .. ++. ....|...........
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEE 177 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGH
T ss_pred CCCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhH
Confidence 56899999999999999999999999999999999998853211 01 000 0001221111100000
Q ss_pred C--chhhHHH---HHHHHHHHhcc---C-------------------CCCceEEEEEechhHHHHHHHHHhccccCCCCC
Q 025145 97 E--DWEGLDA---SAAHIANLLST---E-------------------PADVKVGIGGFSMGAAVALYSATCCALGRYGNG 149 (257)
Q Consensus 97 ~--~~~~~~~---~~~~~~~~~~~---~-------------------~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~ 149 (257)
. ...++.. .+..+.+.+.. . .+..+|+++|||+||..++..+.+
T Consensus 178 ~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~--------- 248 (379)
T PF03403_consen 178 FELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQ--------- 248 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhh---------
Confidence 0 0011111 11222222211 0 011489999999999999998885
Q ss_pred CCcccccceEEEeccCCCCchhhhhccccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecC
Q 025145 150 IPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEG 229 (257)
Q Consensus 150 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g 229 (257)
..++++.|++.+|+..... .....++.|+|+|+.+.= ...+....+.+... ... +..++.+.|
T Consensus 249 ---d~r~~~~I~LD~W~~Pl~~----------~~~~~i~~P~L~InSe~f--~~~~~~~~~~~~~~-~~~-~~~~~ti~g 311 (379)
T PF03403_consen 249 ---DTRFKAGILLDPWMFPLGD----------EIYSKIPQPLLFINSESF--QWWENIFRMKKVIS-NNK-ESRMLTIKG 311 (379)
T ss_dssp ----TT--EEEEES---TTS-G----------GGGGG--S-EEEEEETTT----HHHHHHHHTT---TTS--EEEEEETT
T ss_pred ---ccCcceEEEeCCcccCCCc----------ccccCCCCCEEEEECccc--CChhhHHHHHHHhc-cCC-CcEEEEECC
Confidence 5789999999998753221 011346889999988742 22223333333222 222 567889999
Q ss_pred CCCcc
Q 025145 230 LGHYT 234 (257)
Q Consensus 230 ~~H~~ 234 (257)
+.|..
T Consensus 312 t~H~s 316 (379)
T PF03403_consen 312 TAHLS 316 (379)
T ss_dssp --GGG
T ss_pred CcCCC
Confidence 99953
No 105
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.44 E-value=6.7e-12 Score=109.69 Aligned_cols=176 Identities=16% Similarity=0.085 Sum_probs=111.0
Q ss_pred HhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh------------ccCCCCc
Q 025145 53 LLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL------------STEPADV 120 (257)
Q Consensus 53 ~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~ 120 (257)
+.+.|+.+||.|+..|.||++. ++|. +... ......+..+.++++.... ++.-.+.
T Consensus 271 ~~~~~~~rGYaVV~~D~RGtg~--SeG~-----~~~~-----~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnG 338 (767)
T PRK05371 271 LNDYFLPRGFAVVYVSGIGTRG--SDGC-----PTTG-----DYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNG 338 (767)
T ss_pred HHHHHHhCCeEEEEEcCCCCCC--CCCc-----CccC-----CHHHHHHHHHHHHHHhhCCccccccccccccccCCCCC
Confidence 4566778999999999887653 3332 1110 0112223333333333210 0111135
Q ss_pred eEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh--------------------hh----h--
Q 025145 121 KVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN--------------------LR----N-- 174 (257)
Q Consensus 121 ~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--------------------~~----~-- 174 (257)
+|+++|.|+||++++.+|... ++.++++|..+++....+. +. .
T Consensus 339 kVGm~G~SY~G~~~~~aAa~~-----------pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~ 407 (767)
T PRK05371 339 KVAMTGKSYLGTLPNAVATTG-----------VEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRN 407 (767)
T ss_pred eeEEEEEcHHHHHHHHHHhhC-----------CCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcc
Confidence 999999999999999998853 6777777776543211000 00 0
Q ss_pred ----------------------cc------------ccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCce
Q 025145 175 ----------------------KI------------EGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFR 220 (257)
Q Consensus 175 ----------------------~~------------~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~ 220 (257)
.. ..........+++|+|++||..|..++++.+.++++.+++.+.
T Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~- 486 (767)
T PRK05371 408 LLAGDYLRHNEACEKLLAELTAAQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGV- 486 (767)
T ss_pred cCcchhhcchHHHHHHHhhhhhhhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCC-
Confidence 00 0011123456889999999999999999999999999998766
Q ss_pred eeEEEEecCCCCccC-----HHHHHHHHHHHHHhcCcC
Q 025145 221 HLTFKSFEGLGHYTV-----PKEMDEVCNWLTARLGLE 253 (257)
Q Consensus 221 ~~~~~~~~g~~H~~~-----~~~~~~~~~~l~~~l~~~ 253 (257)
+.++++.++ +|... .+..+.+.+|+..+|...
T Consensus 487 pkkL~l~~g-~H~~~~~~~~~d~~e~~~~Wfd~~LkG~ 523 (767)
T PRK05371 487 PKKLFLHQG-GHVYPNNWQSIDFRDTMNAWFTHKLLGI 523 (767)
T ss_pred CeEEEEeCC-CccCCCchhHHHHHHHHHHHHHhccccC
Confidence 667777775 88543 245678899999987643
No 106
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.43 E-value=1.4e-11 Score=85.79 Aligned_cols=131 Identities=15% Similarity=0.127 Sum_probs=93.7
Q ss_pred hhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhh-hhccc
Q 025145 99 WEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNL-RNKIE 177 (257)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~ 177 (257)
...++++++.+.+.+... .++++||+||+|+.+++.++.+. ...++|+++++|+-...... .....
T Consensus 40 ~P~~~dWi~~l~~~v~a~--~~~~vlVAHSLGc~~v~h~~~~~-----------~~~V~GalLVAppd~~~~~~~~~~~~ 106 (181)
T COG3545 40 APVLDDWIARLEKEVNAA--EGPVVLVAHSLGCATVAHWAEHI-----------QRQVAGALLVAPPDVSRPEIRPKHLM 106 (181)
T ss_pred CCCHHHHHHHHHHHHhcc--CCCeEEEEecccHHHHHHHHHhh-----------hhccceEEEecCCCccccccchhhcc
Confidence 445677888887777655 33699999999999999999864 55899999999876544211 11111
Q ss_pred cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC-------HHHHHHHHHHHHH
Q 025145 178 GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV-------PKEMDEVCNWLTA 248 (257)
Q Consensus 178 ~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-------~~~~~~~~~~l~~ 248 (257)
...........-|.+++..++|++++++.++.+.+... ..++....+||... ++....+.+++.+
T Consensus 107 tf~~~p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~wg------s~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 107 TFDPIPREPLPFPSVVVASRNDPYVSYEHAEDLANAWG------SALVDVGEGGHINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred ccCCCccccCCCceeEEEecCCCCCCHHHHHHHHHhcc------HhheecccccccchhhcCCCcHHHHHHHHHHhhh
Confidence 11222334556799999999999999999999999885 46888888888654 4445555555543
No 107
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.42 E-value=2.6e-11 Score=93.23 Aligned_cols=179 Identities=28% Similarity=0.322 Sum_probs=110.8
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCC--CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025145 34 QATIVWLHGLGDNGSSWSQLLESLPL--PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~--~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
.++|+++||++++...|......+.. ..|.++.+|.|++|.+. . . .......+..+..
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~---~-------------~----~~~~~~~~~~~~~ 80 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD---P-------------A----GYSLSAYADDLAA 80 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC---c-------------c----cccHHHHHHHHHH
Confidence 55999999999999988873333321 12999999999876543 0 0 0111112555555
Q ss_pred HhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCC------------C-----------
Q 025145 112 LLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLP------------G----------- 168 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------------~----------- 168 (257)
+++..... ++.++|||+||.+++.++.+. +..+++++++++... .
T Consensus 81 ~~~~~~~~-~~~l~G~S~Gg~~~~~~~~~~-----------p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (282)
T COG0596 81 LLDALGLE-KVVLVGHSMGGAVALALALRH-----------PDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLL 148 (282)
T ss_pred HHHHhCCC-ceEEEEecccHHHHHHHHHhc-----------chhhheeeEecCCCCcccccCccccCccccchhhhhhhh
Confidence 66554434 699999999999999999965 444555544442110 0
Q ss_pred -----------------chhhhh-----ccc------------------------------c-chHHHhhhcCCCEEEEc
Q 025145 169 -----------------SRNLRN-----KIE------------------------------G-SHEAARRAASLPILLTH 195 (257)
Q Consensus 169 -----------------~~~~~~-----~~~------------------------------~-~~~~~~~~~~~P~l~~~ 195 (257)
...... ... . ..........+|+++++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~ 228 (282)
T COG0596 149 LGLDAAAFAALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIH 228 (282)
T ss_pred hccchhhhhhhhhcccccccccccchhccccccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEe
Confidence 000000 000 0 00112334569999999
Q ss_pred cCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHH
Q 025145 196 GLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTA 248 (257)
Q Consensus 196 G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~ 248 (257)
|++|.+.|......+.+.++. ..+++++++.+|....+..+.+.+.+.+
T Consensus 229 g~~d~~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~p~~~~~~i~~ 277 (282)
T COG0596 229 GEDDPVVPAELARRLAAALPN----DARLVVIPGAGHFPHLEAPEAFAAALLA 277 (282)
T ss_pred cCCCCcCCHHHHHHHHhhCCC----CceEEEeCCCCCcchhhcHHHHHHHHHH
Confidence 999977676554555555542 2689999999999997776665555554
No 108
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.42 E-value=4.3e-12 Score=93.72 Aligned_cols=179 Identities=17% Similarity=0.157 Sum_probs=110.8
Q ss_pred eEEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHH
Q 025145 24 THVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLD 103 (257)
Q Consensus 24 ~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 103 (257)
.+..+......|+|+|+||+.-....|..+...++.+||.|++|++-. . ...+.....+...
T Consensus 36 lI~tP~~~G~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~----------------~--~~p~~~~Ei~~aa 97 (307)
T PF07224_consen 36 LIVTPSEAGTYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYT----------------L--FPPDGQDEIKSAA 97 (307)
T ss_pred EEecCCcCCCccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhc----------------c--cCCCchHHHHHHH
Confidence 344444556789999999999888889999999999999999999531 0 1111222334555
Q ss_pred HHHHHHHHHhccCCC------CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch---hhhh
Q 025145 104 ASAAHIANLLSTEPA------DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR---NLRN 174 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~------~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~ 174 (257)
+.++++..-+++... -.+++++|||.||..|..+|... ...-.+.++|.+.|.--... ....
T Consensus 98 ~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~---------a~~lkfsaLIGiDPV~G~~k~~~t~P~ 168 (307)
T PF07224_consen 98 SVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGY---------ATSLKFSALIGIDPVAGTSKGKQTPPP 168 (307)
T ss_pred HHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcc---------cccCchhheecccccCCCCCCCCCCCC
Confidence 555665554443221 15999999999999999999854 23556888888776432221 1111
Q ss_pred ccccchHHHhhhcCCCEEEEccCCC-------Ccccch--hhHHHHHHhhhcCceeeEEEEecCCCCccC
Q 025145 175 KIEGSHEAARRAASLPILLTHGLCD-------DVVPYK--YGEKSANCLSISGFRHLTFKSFEGLGHYTV 235 (257)
Q Consensus 175 ~~~~~~~~~~~~~~~P~l~~~G~~D-------~~v~~~--~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 235 (257)
.+...+ ..-..+.|+++|-..-- .-+.++ .-+++++..+. .+-..+..+.||.-+
T Consensus 169 iLty~p--~SF~l~iPv~VIGtGLg~~~~~~~~~CaP~gvnH~eFf~eCk~----p~~hfV~~dYGHmDm 232 (307)
T PF07224_consen 169 ILTYVP--QSFDLDIPVLVIGTGLGPKRNPLFPPCAPDGVNHEEFFNECKP----PCAHFVAKDYGHMDM 232 (307)
T ss_pred eeecCC--cccccCCceEEEecCcCccccCCCCCCCCCCcCHHHHHHhhcc----cceeeeecccccccc
Confidence 111111 11133589998864433 222222 23778888874 344445556899643
No 109
>PRK04940 hypothetical protein; Provisional
Probab=99.42 E-value=3.6e-11 Score=85.48 Aligned_cols=106 Identities=17% Similarity=0.124 Sum_probs=70.9
Q ss_pred ceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccc------hHH---Hh-hhcCC
Q 025145 120 VKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGS------HEA---AR-RAASL 189 (257)
Q Consensus 120 ~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~------~~~---~~-~~~~~ 189 (257)
+++.|+|.|+||+.|..++.+. .+++|+ +.|.+.+...+...+... ... .. ....-
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~-------------g~~aVL-iNPAv~P~~~L~~~ig~~~~y~~~~~~h~~eL~~~~p~ 125 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLC-------------GIRQVI-FNPNLFPEENMEGKIDRPEEYADIATKCVTNFREKNRD 125 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHH-------------CCCEEE-ECCCCChHHHHHHHhCCCcchhhhhHHHHHHhhhcCcc
Confidence 3799999999999999999853 455444 566554443333322211 000 11 12233
Q ss_pred CEEEEccCCCCcccchhhHHHHHHhhhcCceee-EEEEecCCCCccC--HHHHHHHHHHHH
Q 025145 190 PILLTHGLCDDVVPYKYGEKSANCLSISGFRHL-TFKSFEGLGHYTV--PKEMDEVCNWLT 247 (257)
Q Consensus 190 P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~-~~~~~~g~~H~~~--~~~~~~~~~~l~ 247 (257)
..+++..+.|++.++..+.+ ++. .+ +.++.+|++|.+. .+.+..|.+|+.
T Consensus 126 r~~vllq~gDEvLDyr~a~~---~y~-----~~y~~~v~~GGdH~f~~fe~~l~~I~~F~~ 178 (180)
T PRK04940 126 RCLVILSRNDEVLDSQRTAE---ELH-----PYYEIVWDEEQTHKFKNISPHLQRIKAFKT 178 (180)
T ss_pred cEEEEEeCCCcccCHHHHHH---Hhc-----cCceEEEECCCCCCCCCHHHHHHHHHHHHh
Confidence 47999999999999866544 443 34 6889999999987 677899999984
No 110
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.42 E-value=1.8e-12 Score=92.09 Aligned_cols=183 Identities=12% Similarity=0.078 Sum_probs=117.3
Q ss_pred CCceEEEEEccCCCCccc---hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHH
Q 025145 32 KHQATIVWLHGLGDNGSS---WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAH 108 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~---~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 108 (257)
...+++||+||.-....+ --.....+.+.||+|+.+++- .. .....-...+.+....
T Consensus 65 ~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~-----------------l~---~q~htL~qt~~~~~~g 124 (270)
T KOG4627|consen 65 NQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYN-----------------LC---PQVHTLEQTMTQFTHG 124 (270)
T ss_pred CCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccC-----------------cC---cccccHHHHHHHHHHH
Confidence 445699999994332222 222334444689999998732 11 1111123333444444
Q ss_pred HHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhcc------------
Q 025145 109 IANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKI------------ 176 (257)
Q Consensus 109 ~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~------------ 176 (257)
+.-.++.....+++.+.|||.|++++..+..|. ..+++.++++++|.+...+......
T Consensus 125 v~filk~~~n~k~l~~gGHSaGAHLa~qav~R~----------r~prI~gl~l~~GvY~l~EL~~te~g~dlgLt~~~ae 194 (270)
T KOG4627|consen 125 VNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQ----------RSPRIWGLILLCGVYDLRELSNTESGNDLGLTERNAE 194 (270)
T ss_pred HHHHHHhcccceeEEEcccchHHHHHHHHHHHh----------cCchHHHHHHHhhHhhHHHHhCCccccccCcccchhh
Confidence 433344333345788999999999999999874 3678999999998765443222111
Q ss_pred -ccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHH----HHHHHHHHHh
Q 025145 177 -EGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEM----DEVCNWLTAR 249 (257)
Q Consensus 177 -~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~----~~~~~~l~~~ 249 (257)
-..........+.|++++.|+.|.---.++.+.+.+.++ +.++..|++.+|+-..+.. ..+..|++++
T Consensus 195 ~~Scdl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~-----~a~~~~f~n~~hy~I~~~~~~~~s~~~~~~~~~ 267 (270)
T KOG4627|consen 195 SVSCDLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLR-----KASFTLFKNYDHYDIIEETAIDDSDVSRFLRNI 267 (270)
T ss_pred hcCccHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhh-----hcceeecCCcchhhHHHHhccccchHHHHHHHH
Confidence 011222345568899999999998877889999999998 5689999999998664432 3455555554
No 111
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.39 E-value=1.9e-11 Score=104.30 Aligned_cols=113 Identities=16% Similarity=0.100 Sum_probs=71.3
Q ss_pred EEeCCCCCCceEEEEEccCCCCcc---ch-HHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchh
Q 025145 25 HVVRPKGKHQATIVWLHGLGDNGS---SW-SQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWE 100 (257)
Q Consensus 25 ~~~~~~~~~~~~vi~~HG~~~~~~---~~-~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~ 100 (257)
++.+...++.|+||++||++.+.. .+ ......|+.+||.|+++|.||+|.+. |. ..++. .
T Consensus 13 ~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~--g~--~~~~~------------~ 76 (550)
T TIGR00976 13 VYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASE--GE--FDLLG------------S 76 (550)
T ss_pred EEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCC--Cc--eEecC------------c
Confidence 333434457899999999997653 12 22445667789999999999876543 21 01010 1
Q ss_pred hHHHHHHHHHHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEecc
Q 025145 101 GLDASAAHIANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSG 164 (257)
Q Consensus 101 ~~~~~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 164 (257)
...+++..+.+++..+ ..+.+|+++|+|+||.+++.++.+. ++.+++++..++
T Consensus 77 ~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~-----------~~~l~aiv~~~~ 130 (550)
T TIGR00976 77 DEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQ-----------PPALRAIAPQEG 130 (550)
T ss_pred ccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccC-----------CCceeEEeecCc
Confidence 1122333344444333 2234999999999999999999854 566777776554
No 112
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.38 E-value=9.4e-12 Score=102.31 Aligned_cols=196 Identities=15% Similarity=0.137 Sum_probs=125.5
Q ss_pred CCCceEEEEEccCCCCcc---chH--H--HhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHH
Q 025145 31 GKHQATIVWLHGLGDNGS---SWS--Q--LLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLD 103 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~---~~~--~--~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 103 (257)
+++.|+|+++-|..+--. .|. . -...|+..||.|+++|.||. .-.|.+..+|+..... .-.+.
T Consensus 639 gkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS---~hRGlkFE~~ik~kmG-------qVE~e 708 (867)
T KOG2281|consen 639 GKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGS---AHRGLKFESHIKKKMG-------QVEVE 708 (867)
T ss_pred CCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCc---cccchhhHHHHhhccC-------eeeeh
Confidence 456899999999775322 122 1 12456678999999997753 1224444444432211 22234
Q ss_pred HHHHHHHHHhccC--CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCC---Cchhhhhcccc
Q 025145 104 ASAAHIANLLSTE--PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLP---GSRNLRNKIEG 178 (257)
Q Consensus 104 ~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~ 178 (257)
+.++.+..+.++. .+.++|++-|+|+||++++..+.+ +|+-++.+|+-+|... ......+++..
T Consensus 709 DQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~-----------~P~IfrvAIAGapVT~W~~YDTgYTERYMg 777 (867)
T KOG2281|consen 709 DQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQ-----------YPNIFRVAIAGAPVTDWRLYDTGYTERYMG 777 (867)
T ss_pred hhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhc-----------CcceeeEEeccCcceeeeeecccchhhhcC
Confidence 4445554444443 334699999999999999999995 4888888776655211 11111111111
Q ss_pred ch-------------HHHhhhc--CCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCH----HHH
Q 025145 179 SH-------------EAARRAA--SLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVP----KEM 239 (257)
Q Consensus 179 ~~-------------~~~~~~~--~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~----~~~ 239 (257)
.+ ....+.. ...+|++||--|+.|...+...|...+-++|. ..++.+||+..|.+-. ..+
T Consensus 778 ~P~~nE~gY~agSV~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagK-pyeL~IfP~ERHsiR~~es~~~y 856 (867)
T KOG2281|consen 778 YPDNNEHGYGAGSVAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGK-PYELQIFPNERHSIRNPESGIYY 856 (867)
T ss_pred CCccchhcccchhHHHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCC-ceEEEEccccccccCCCccchhH
Confidence 11 1112222 34499999999999999999999999999987 8899999999998752 222
Q ss_pred -HHHHHHHHH
Q 025145 240 -DEVCNWLTA 248 (257)
Q Consensus 240 -~~~~~~l~~ 248 (257)
.+++.|+++
T Consensus 857 E~rll~FlQ~ 866 (867)
T KOG2281|consen 857 EARLLHFLQE 866 (867)
T ss_pred HHHHHHHHhh
Confidence 567777765
No 113
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.38 E-value=1.5e-11 Score=93.47 Aligned_cols=183 Identities=18% Similarity=0.221 Sum_probs=116.4
Q ss_pred eEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhc
Q 025145 35 ATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLS 114 (257)
Q Consensus 35 ~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (257)
++|+++|+.+++...|..+++.+....+.|+.++.|+++ .......++.+++..+.+.+.
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~--------------------~~~~~~~si~~la~~y~~~I~ 60 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRG--------------------DDEPPPDSIEELASRYAEAIR 60 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSC--------------------TTSHEESSHHHHHHHHHHHHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCC--------------------CCCCCCCCHHHHHHHHHHHhh
Confidence 379999999999999999999997335999999988542 011123455666666666665
Q ss_pred cCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhh-----------ccc------
Q 025145 115 TEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRN-----------KIE------ 177 (257)
Q Consensus 115 ~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~------ 177 (257)
......++.|+|||+||.+|+.+|.+... .-..+..++++.++.|....... .+.
T Consensus 61 ~~~~~gp~~L~G~S~Gg~lA~E~A~~Le~--------~G~~v~~l~liD~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (229)
T PF00975_consen 61 ARQPEGPYVLAGWSFGGILAFEMARQLEE--------AGEEVSRLILIDSPPPSIKERPRSREPSDEQFIEELRRIGGTP 132 (229)
T ss_dssp HHTSSSSEEEEEETHHHHHHHHHHHHHHH--------TT-SESEEEEESCSSTTCHSCHHHHHCHHHHHHHHHHHHCHHH
T ss_pred hhCCCCCeeehccCccHHHHHHHHHHHHH--------hhhccCceEEecCCCCCcccchhhhhhhHHHHHHHHHHhcCCc
Confidence 54444499999999999999999986521 12357888888876664210000 000
Q ss_pred ----cch-----------H--HH-----hhh---cCCCEEEEccCCCCcccchhhH---HHHHHhhhcCceeeEEEEecC
Q 025145 178 ----GSH-----------E--AA-----RRA---ASLPILLTHGLCDDVVPYKYGE---KSANCLSISGFRHLTFKSFEG 229 (257)
Q Consensus 178 ----~~~-----------~--~~-----~~~---~~~P~l~~~G~~D~~v~~~~~~---~~~~~l~~~~~~~~~~~~~~g 229 (257)
... . .. ... ..+|..+.....|.....+.-. .+.+... ..++++.++|
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~----~~~~~~~v~G 208 (229)
T PF00975_consen 133 DASLEDEELLARLLRALRDDFQALENYSIRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTS----GDVEVHDVPG 208 (229)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHHTCS-TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBS----SSEEEEEESS
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHhhccCCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcC----CCcEEEEEcC
Confidence 000 0 00 001 1346888888888887655211 2222222 1678999997
Q ss_pred CCCccCHH-HHHHHHHHHHHhc
Q 025145 230 LGHYTVPK-EMDEVCNWLTARL 250 (257)
Q Consensus 230 ~~H~~~~~-~~~~~~~~l~~~l 250 (257)
+|..+.. ....+.+.|.+.|
T Consensus 209 -~H~~~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 209 -DHFSMLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp -ETTGHHSTTHHHHHHHHHHHH
T ss_pred -CCcEecchHHHHHHHHHhccC
Confidence 9987654 6777888777654
No 114
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.36 E-value=3.4e-11 Score=93.84 Aligned_cols=182 Identities=18% Similarity=0.121 Sum_probs=108.3
Q ss_pred ceEEeC--CCCCCceEEEEEccCCCCccchHHHh----------hcCCCCceEEEccCCCCCCcccCCCCcccccccCCC
Q 025145 23 RTHVVR--PKGKHQATIVWLHGLGDNGSSWSQLL----------ESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGE 90 (257)
Q Consensus 23 ~~~~~~--~~~~~~~~vi~~HG~~~~~~~~~~~~----------~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~ 90 (257)
..++.+ ....+.|+||..|+++.......... +.|+++||.|+..|.||+|.+ .|. ++.
T Consensus 7 adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S--~G~-----~~~-- 77 (272)
T PF02129_consen 7 ADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGS--EGE-----FDP-- 77 (272)
T ss_dssp EEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS---S------B-T--
T ss_pred EEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccC--CCc-----ccc--
Confidence 344445 56778999999999996542211111 126679999999998876532 232 110
Q ss_pred CCCCCCCchhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch
Q 025145 91 LSDDGPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR 170 (257)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 170 (257)
.......+..+.|..+.++.-.+.+|+++|.|++|..++.+|... ++.+++++...+..+...
T Consensus 78 ------~~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~-----------~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 78 ------MSPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARR-----------PPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp ------TSHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT------------TTEEEEEEESE-SBTCC
T ss_pred ------CChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcC-----------CCCceEEEecccCCcccc
Confidence 023333333344333333322235999999999999999999854 788888887765322111
Q ss_pred ------------hhhhc-------------------------------------c---------------------ccch
Q 025145 171 ------------NLRNK-------------------------------------I---------------------EGSH 180 (257)
Q Consensus 171 ------------~~~~~-------------------------------------~---------------------~~~~ 180 (257)
....+ . ....
T Consensus 141 ~~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~ 220 (272)
T PF02129_consen 141 DSIYPGGAFRLGFFAGWEDLQSQQEDPQSRPAPDRDYLRERARYEALGDSPLGRLPRDPPYWDEWLDHPPYDPFWQERSP 220 (272)
T ss_dssp TSSEETTEEBCCHHHHHHHHHHHHHHHTCCCCSSSHHHHHHHHHHCHHHHHHHHCHGGTHHHHHHHHT-SSSHHHHTTBH
T ss_pred cchhcCCcccccchhHHHHHHHHhhcccCCCchhhhhhhhhhhhhhhhhHHHhhhccccHHHHHHHhCCCcCHHHHhCCh
Confidence 00000 0 0001
Q ss_pred HHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcC-ceeeEEEEecCCCCc
Q 025145 181 EAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISG-FRHLTFKSFEGLGHY 233 (257)
Q Consensus 181 ~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~-~~~~~~~~~~g~~H~ 233 (257)
......+++|+|++.|-.|..+. ..+.+.++.++..+ . +.++++-|. +|.
T Consensus 221 ~~~~~~i~vP~l~v~Gw~D~~~~-~~~~~~~~~l~~~~~~-~~~Liigpw-~H~ 271 (272)
T PF02129_consen 221 SERLDKIDVPVLIVGGWYDTLFL-RGALRAYEALRAPGSK-PQRLIIGPW-THG 271 (272)
T ss_dssp HHHHGG--SEEEEEEETTCSSTS-HHHHHHHHHHCTTSTC--EEEEEESE-STT
T ss_pred HHHHhhCCCCEEEecccCCcccc-hHHHHHHHHhhcCCCC-CCEEEEeCC-CCC
Confidence 11346789999999999997666 77888889998875 3 458888885 774
No 115
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=99.35 E-value=1.4e-10 Score=94.64 Aligned_cols=129 Identities=16% Similarity=0.154 Sum_probs=85.5
Q ss_pred HHHHHHHHhccC----CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhh---hhccc
Q 025145 105 SAAHIANLLSTE----PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNL---RNKIE 177 (257)
Q Consensus 105 ~~~~~~~~~~~~----~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~~~~ 177 (257)
..+.+..++++. ...++.+|+|+||||..|+.++.+ +|+.|..++++||.+...... ...+.
T Consensus 269 l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~-----------~Pd~Fg~v~s~Sgs~ww~~~~~~~~~~l~ 337 (411)
T PRK10439 269 VQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLH-----------WPERFGCVLSQSGSFWWPHRGGQQEGVLL 337 (411)
T ss_pred HHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHh-----------CcccccEEEEeccceecCCccCCchhHHH
Confidence 345555555543 233588999999999999999995 499999999999865211100 00000
Q ss_pred c-chHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC--HHHHHHHHHHHH
Q 025145 178 G-SHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV--PKEMDEVCNWLT 247 (257)
Q Consensus 178 ~-~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l~ 247 (257)
. ............+++-+|+.|..+ .+..+++.+.|+++|. ++++.+++| ||... ...+.+.+.||-
T Consensus 338 ~~l~~~~~~~~~lr~~i~~G~~E~~~-~~~~~~l~~~L~~~G~-~~~~~~~~G-GHd~~~Wr~~L~~~L~~l~ 407 (411)
T PRK10439 338 EQLKAGEVSARGLRIVLEAGRREPMI-MRANQALYAQLHPAGH-SVFWRQVDG-GHDALCWRGGLIQGLIDLW 407 (411)
T ss_pred HHHHhcccCCCCceEEEeCCCCCchH-HHHHHHHHHHHHHCCC-cEEEEECCC-CcCHHHHHHHHHHHHHHHh
Confidence 0 000001122346888899988654 4667999999999998 899999997 89754 455555556553
No 116
>KOG3101 consensus Esterase D [General function prediction only]
Probab=99.35 E-value=1.3e-11 Score=88.07 Aligned_cols=206 Identities=18% Similarity=0.243 Sum_probs=121.9
Q ss_pred CCCceEEEEEccCCCCccchHH---HhhcCCCCceEEEccCCCCCCcccCCCCcccccccC--------CCCCCCCCCch
Q 025145 31 GKHQATIVWLHGLGDNGSSWSQ---LLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDV--------GELSDDGPEDW 99 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~~~---~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~--------~~~~~~~~~~~ 99 (257)
+++-|++.++.|+.++..++.. +-+.-.++|+.|+.||...||....+... +| ++ ....++-....
T Consensus 41 ~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~e--sw-DFG~GAGFYvnAt~epw~~~y 117 (283)
T KOG3101|consen 41 GKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDE--SW-DFGQGAGFYVNATQEPWAKHY 117 (283)
T ss_pred CCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcc--cc-cccCCceeEEecccchHhhhh
Confidence 4457999999999999988753 33344478999999998777765543221 22 22 11222222345
Q ss_pred hhHHHHHHHHHHHhccCC---CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch------
Q 025145 100 EGLDASAAHIANLLSTEP---ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR------ 170 (257)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------ 170 (257)
..++...+.+.+++.... +..++.++||||||+-|+..+.+. +.+.+.+-+++|.....+
T Consensus 118 rMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn-----------~~kykSvSAFAPI~NP~~cpWGqK 186 (283)
T KOG3101|consen 118 RMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKN-----------PSKYKSVSAFAPICNPINCPWGQK 186 (283)
T ss_pred hHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcC-----------cccccceeccccccCcccCcchHH
Confidence 556666666767766422 235899999999999999988853 666666665555322111
Q ss_pred ----------hhhhccccch-HHHhhhcCCCEEEEccCCCCcccchh-hHHHHHHhhhcCceeeEEEEecCCCCcc--CH
Q 025145 171 ----------NLRNKIEGSH-EAARRAASLPILLTHGLCDDVVPYKY-GEKSANCLSISGFRHLTFKSFEGLGHYT--VP 236 (257)
Q Consensus 171 ----------~~~~~~~~~~-~~~~~~~~~P~l~~~G~~D~~v~~~~-~~~~~~~l~~~~~~~~~~~~~~g~~H~~--~~ 236 (257)
.-.+.+.... ..........+||-+|..|.+.+.+. -+.+.+..+......+.+...+|-+|.. +.
T Consensus 187 Af~gYLG~~ka~W~~yDat~lik~y~~~~~~ilIdqG~~D~Fl~~qLlPe~l~~a~~~~~~~~v~~r~~~gyDHSYyfIa 266 (283)
T KOG3101|consen 187 AFTGYLGDNKAQWEAYDATHLIKNYRGVGDDILIDQGAADNFLAEQLLPENLLEACKATWQAPVVFRLQEGYDHSYYFIA 266 (283)
T ss_pred HhhcccCCChHHHhhcchHHHHHhcCCCCccEEEecCccchhhhhhcChHHHHHHhhccccccEEEEeecCCCcceeeeh
Confidence 1111111100 11223344569999999999887322 2445555543321257888889999964 33
Q ss_pred HHHHHHHHHHHHhc
Q 025145 237 KEMDEVCNWLTARL 250 (257)
Q Consensus 237 ~~~~~~~~~l~~~l 250 (257)
....+-.++-.+.|
T Consensus 267 TFv~dHi~hHA~~L 280 (283)
T KOG3101|consen 267 TFVADHIEHHAKNL 280 (283)
T ss_pred hhhHHHHHHHHHHh
Confidence 33444444444333
No 117
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.34 E-value=3.3e-11 Score=99.90 Aligned_cols=176 Identities=10% Similarity=0.030 Sum_probs=111.8
Q ss_pred eEEeCCCC--CCceEEEEEccCCCCccch-----HHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCC
Q 025145 24 THVVRPKG--KHQATIVWLHGLGDNGSSW-----SQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGP 96 (257)
Q Consensus 24 ~~~~~~~~--~~~~~vi~~HG~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~ 96 (257)
.+.|.|.. ..+.+||+++.+-.....+ +.+++.|.++|+.|+++|.+.-+.. ...
T Consensus 203 LiqY~P~te~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~------------------~r~ 264 (560)
T TIGR01839 203 LIQYKPITEQQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKA------------------HRE 264 (560)
T ss_pred EEEeCCCCCCcCCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChh------------------hcC
Confidence 45555543 3457899999977544444 4688999899999999996631100 111
Q ss_pred CchhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHH----HHHhccccCCCCCCCccc-ccceEEEeccCCCCchh
Q 025145 97 EDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALY----SATCCALGRYGNGIPYYV-NLRAVVGLSGWLPGSRN 171 (257)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~----~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~ 171 (257)
...+++.+.+....+.+.......++.++|+|+||.++.. ++++. ++ +++.++++...++....
T Consensus 265 ~~ldDYv~~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~-----------~~~~V~sltllatplDf~~~ 333 (560)
T TIGR01839 265 WGLSTYVDALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALG-----------QLRKVNSLTYLVSLLDSTME 333 (560)
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcC-----------CCCceeeEEeeecccccCCC
Confidence 1223333344444455555555569999999999999997 55543 43 67777666543322100
Q ss_pred -----------h--------------------------------------------------hhcc--------------
Q 025145 172 -----------L--------------------------------------------------RNKI-------------- 176 (257)
Q Consensus 172 -----------~--------------------------------------------------~~~~-------------- 176 (257)
+ ..+.
T Consensus 334 g~l~~f~~e~~~~~~e~~~~~~G~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg~~~~e~ 413 (560)
T TIGR01839 334 SPAALFADEQTLEAAKRRSYQAGVLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPAAFHGDL 413 (560)
T ss_pred CcchhccChHHHHHHHHHHHhcCCcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchHHHHHHH
Confidence 0 0000
Q ss_pred ----ccc------------hHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCc
Q 025145 177 ----EGS------------HEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHY 233 (257)
Q Consensus 177 ----~~~------------~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~ 233 (257)
..+ .......+++|++++.|+.|.++|.+.+..+.+.+.. +++++..++ ||.
T Consensus 414 l~ly~~N~L~~pG~l~v~G~~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs----~~~fvl~~g-GHI 481 (560)
T TIGR01839 414 LDMFKSNPLTRPDALEVCGTPIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGG----KRRFVLSNS-GHI 481 (560)
T ss_pred HHHHhcCCCCCCCCEEECCEEechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCC----CeEEEecCC-Ccc
Confidence 000 0014566899999999999999999999988887753 578999985 993
No 118
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.33 E-value=6.1e-12 Score=97.70 Aligned_cols=113 Identities=20% Similarity=0.198 Sum_probs=71.9
Q ss_pred CCCceEEEEEccCCCCc-cchHH-Hhh-cCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHH
Q 025145 31 GKHQATIVWLHGLGDNG-SSWSQ-LLE-SLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAA 107 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~-~~~~~-~~~-~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 107 (257)
++.+|++|++||++++. ..|.. +.+ .+...+++|+++|+++.... . |.. .......+.+.+.
T Consensus 33 ~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~---~------y~~------a~~~~~~v~~~la 97 (275)
T cd00707 33 NPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANP---N------YPQ------AVNNTRVVGAELA 97 (275)
T ss_pred CCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECcccccc---C------hHH------HHHhHHHHHHHHH
Confidence 45578999999999887 56654 444 34446899999998743100 0 000 0011222223333
Q ss_pred HHHHHhccC--CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc
Q 025145 108 HIANLLSTE--PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS 169 (257)
Q Consensus 108 ~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 169 (257)
.+.+.+.+. ...++++|+||||||.++..++.+. +.+++.++++.|..|..
T Consensus 98 ~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~-----------~~~v~~iv~LDPa~p~f 150 (275)
T cd00707 98 KFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRL-----------NGKLGRITGLDPAGPLF 150 (275)
T ss_pred HHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHh-----------cCccceeEEecCCcccc
Confidence 333333222 2335899999999999999999854 77899999998766543
No 119
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.32 E-value=6e-11 Score=92.69 Aligned_cols=67 Identities=21% Similarity=0.406 Sum_probs=59.3
Q ss_pred cCCCEEEEccCCCCcccchhhHHHHHHhhhcC-ceeeEEEEecCCCCccC-HHHHHHHHHHHHHhcCcCC
Q 025145 187 ASLPILLTHGLCDDVVPYKYGEKSANCLSISG-FRHLTFKSFEGLGHYTV-PKEMDEVCNWLTARLGLEG 254 (257)
Q Consensus 187 ~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~-~~~~~~~~~~g~~H~~~-~~~~~~~~~~l~~~l~~~~ 254 (257)
.+.|+++.||..|+++|+....++++++.+.| . ++++..+++.+|... .......++||.+.|..++
T Consensus 218 P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a-~V~~~~~~~~~H~~~~~~~~~~a~~Wl~~rf~G~~ 286 (290)
T PF03583_consen 218 PTVPVLIYQGTADEVVPPADTDALVAKWCAAGGA-DVEYVRYPGGGHLGAAFASAPDALAWLDDRFAGKP 286 (290)
T ss_pred CCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCC-CEEEEecCCCChhhhhhcCcHHHHHHHHHHHCCCC
Confidence 46899999999999999999999999999999 6 899999999999765 4556888999999988654
No 120
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.32 E-value=2.7e-11 Score=94.55 Aligned_cols=197 Identities=20% Similarity=0.155 Sum_probs=121.4
Q ss_pred cCCCCCceEEeCCCC------CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCC-------ccc
Q 025145 17 RTFEFGRTHVVRPKG------KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGF-------PCT 83 (257)
Q Consensus 17 ~~~~~~~~~~~~~~~------~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~-------~~~ 83 (257)
++-..+..+.++... ...|+|++.||.|+...+|..+++.++..||.|..++.|+.-.+..+.. ...
T Consensus 48 r~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~ 127 (365)
T COG4188 48 RDRERPVDLRLPQGGTGTVALYLLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPA 127 (365)
T ss_pred cCCccccceeccCCCccccccCcCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchh
Confidence 344444554444332 2679999999999999999999999999999999999997432222110 001
Q ss_pred ccccCCCCCCCCCCchhhHHHHHHHHHHH-----hccCCCCceEEEEEechhHHHHHHHHHhccc-----------c---
Q 025145 84 AWFDVGELSDDGPEDWEGLDASAAHIANL-----LSTEPADVKVGIGGFSMGAAVALYSATCCAL-----------G--- 144 (257)
Q Consensus 84 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~-----------~--- 144 (257)
.|+ +...++...++.+.+. ++...+..+|.++|||+||+.++.++.-... .
T Consensus 128 ~~~----------erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~ 197 (365)
T COG4188 128 EWW----------ERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRIC 197 (365)
T ss_pred hhh----------cccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcc
Confidence 121 2234455555565555 2222334699999999999999988753210 0
Q ss_pred --C-CCC---------------CC-CcccccceEEEeccCCCCchhhhhccccchHHHhhhcCCCEEEEccCCCCcccch
Q 025145 145 --R-YGN---------------GI-PYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDDVVPYK 205 (257)
Q Consensus 145 --~-~~~---------------~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~ 205 (257)
. ... .. --..++++++++.+.+...-. ......++.|++++.|..|.+.|.+
T Consensus 198 ~~~~~~~~~~l~q~~av~~~~~~~~~rDpriravvA~~p~~~~~Fg---------~tgl~~v~~P~~~~a~s~D~~aP~~ 268 (365)
T COG4188 198 LDPPGLNGRLLNQCAAVWLPRQAYDLRDPRIRAVVAINPALGMIFG---------TTGLVKVTDPVLLAAGSADGFAPPV 268 (365)
T ss_pred cCCCCcChhhhccccccccchhhhccccccceeeeeccCCcccccc---------cccceeeecceeeecccccccCCcc
Confidence 0 000 00 012346666666554332211 1223567999999999999987754
Q ss_pred h-hHHHHHHhhhcCceeeEEEEecCCCCccC
Q 025145 206 Y-GEKSANCLSISGFRHLTFKSFEGLGHYTV 235 (257)
Q Consensus 206 ~-~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 235 (257)
. .......++.. ..-+.+++++.|.-.
T Consensus 269 ~~~~~~f~~l~g~---~k~~~~vp~a~h~sf 296 (365)
T COG4188 269 TEQIRPFGYLPGA---LKYLRLVPGATHFSF 296 (365)
T ss_pred cccccccccCCcc---hhheeecCCCccccc
Confidence 3 34455555532 346788899999765
No 121
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.31 E-value=8.9e-11 Score=90.66 Aligned_cols=180 Identities=15% Similarity=0.136 Sum_probs=112.6
Q ss_pred CceEEEEEccCCCCccchHHHhhcCC---CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025145 33 HQATIVWLHGLGDNGSSWSQLLESLP---LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~---~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
++..++|++|..|-...|..+.+.|. ...+.|++..+.||........ ........++.+.++..
T Consensus 1 ~~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~------------~~~~~~~~sL~~QI~hk 68 (266)
T PF10230_consen 1 PRPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSK------------FSPNGRLFSLQDQIEHK 68 (266)
T ss_pred CcEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCccccc------------ccCCCCccCHHHHHHHH
Confidence 35789999999999999988777665 4689999999887633222100 00112233444444444
Q ss_pred H----HHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc---------------
Q 025145 110 A----NLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS--------------- 169 (257)
Q Consensus 110 ~----~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------------- 169 (257)
. +++.+.. ...+++|+|||.|+++++.++.+.+ ....++..++++.|.+...
T Consensus 69 ~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~--------~~~~~V~~~~lLfPTi~~ia~Sp~G~~l~~~~~~ 140 (266)
T PF10230_consen 69 IDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLP--------DLKFRVKKVILLFPTIEDIAKSPNGRRLTPLLFS 140 (266)
T ss_pred HHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhcc--------ccCCceeEEEEeCCccccccCCchhHHHHHHHhh
Confidence 4 4444332 3459999999999999999999752 0125677777666531100
Q ss_pred -------------------hhhhh---------------------------------------ccccch-HHHhhh---c
Q 025145 170 -------------------RNLRN---------------------------------------KIEGSH-EAARRA---A 187 (257)
Q Consensus 170 -------------------~~~~~---------------------------------------~~~~~~-~~~~~~---~ 187 (257)
..+.. .+.... ...... .
T Consensus 141 ~~~~~~~~~~~~~l~~~lP~~~~~~lv~~~~~~~~~~~~~t~~~l~~~~~v~qaL~Ma~~Em~~I~~~d~~~~~~~~~~~ 220 (266)
T PF10230_consen 141 PPPLVWLASFLSFLLSLLPESVLRWLVRWVMGFPPPAVEATTKFLLSPRVVRQALYMARDEMREIREDDNDELIKHHNEN 220 (266)
T ss_pred ccHHHHHHHHHHHHHHHCCHHHHHHHHHHHcCCChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHccCcchHHHHHHhccC
Confidence 00000 000111 111111 2
Q ss_pred CCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCcc
Q 025145 188 SLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYT 234 (257)
Q Consensus 188 ~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~ 234 (257)
..++.+..|.+|..||.+..+++.++.+.... ++++.. +|..|.+
T Consensus 221 ~~kl~f~fg~~D~Wvp~~~~~~l~~~~~~~~~-~~~v~~-~~i~HaF 265 (266)
T PF10230_consen 221 GDKLWFYFGQNDHWVPNETRDELIERYPGHEP-DVVVDE-EGIPHAF 265 (266)
T ss_pred CCEEEEEEeCCCCCCCHHHHHHHHHHcCCCCC-eEEEec-CCCCCCC
Confidence 67899999999999999999999999985432 455555 7788875
No 122
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.31 E-value=8.2e-11 Score=86.16 Aligned_cols=171 Identities=18% Similarity=0.135 Sum_probs=101.4
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCC-CcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025145 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTR-PVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~-g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
.+++||+..|++...+.|..++.+|+.+||.|+.+|.-.| |.+. |. -.........+....+.+
T Consensus 29 ~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSs--G~-------------I~eftms~g~~sL~~V~d 93 (294)
T PF02273_consen 29 RNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSS--GD-------------INEFTMSIGKASLLTVID 93 (294)
T ss_dssp -S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B----------------------------HHHHHHHHHHHHH
T ss_pred cCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCC--CC-------------hhhcchHHhHHHHHHHHH
Confidence 4589999999999999999999999999999999996544 2111 10 011123344556667777
Q ss_pred HhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccc--------------
Q 025145 112 LLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIE-------------- 177 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-------------- 177 (257)
+++..... ++.|+.-|+.|.+|+..+.+ ..+..+|..-|.......+.+.+.
T Consensus 94 wl~~~g~~-~~GLIAaSLSaRIAy~Va~~-------------i~lsfLitaVGVVnlr~TLe~al~~Dyl~~~i~~lp~d 159 (294)
T PF02273_consen 94 WLATRGIR-RIGLIAASLSARIAYEVAAD-------------INLSFLITAVGVVNLRDTLEKALGYDYLQLPIEQLPED 159 (294)
T ss_dssp HHHHTT----EEEEEETTHHHHHHHHTTT-------------S--SEEEEES--S-HHHHHHHHHSS-GGGS-GGG--SE
T ss_pred HHHhcCCC-cchhhhhhhhHHHHHHHhhc-------------cCcceEEEEeeeeeHHHHHHHHhccchhhcchhhCCCc
Confidence 88755444 89999999999999999983 356667666665443332222110
Q ss_pred -------------------------cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCC
Q 025145 178 -------------------------GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGH 232 (257)
Q Consensus 178 -------------------------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H 232 (257)
.......+...+|++.+++++|..|......++.+.+... .++++.++|+.|
T Consensus 160 ldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~---~~klysl~Gs~H 236 (294)
T PF02273_consen 160 LDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSN---KCKLYSLPGSSH 236 (294)
T ss_dssp EEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT-----EEEEEETT-SS
T ss_pred ccccccccchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCC---ceeEEEecCccc
Confidence 1112245567999999999999999998888887777654 689999999999
Q ss_pred ccC
Q 025145 233 YTV 235 (257)
Q Consensus 233 ~~~ 235 (257)
.+.
T Consensus 237 dL~ 239 (294)
T PF02273_consen 237 DLG 239 (294)
T ss_dssp -TT
T ss_pred hhh
Confidence 865
No 123
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.29 E-value=3.4e-11 Score=97.96 Aligned_cols=112 Identities=21% Similarity=0.226 Sum_probs=72.9
Q ss_pred CCceEEEEEccCCCCc--cchHH-HhhcCC--CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHH
Q 025145 32 KHQATIVWLHGLGDNG--SSWSQ-LLESLP--LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASA 106 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~--~~~~~-~~~~l~--~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 106 (257)
...|++|++||++.+. ..|.. +.+.|. ...++|+++|+++++.+.... .......+.+.+
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~---------------a~~~t~~vg~~l 103 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPT---------------SAAYTKLVGKDV 103 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCcc---------------ccccHHHHHHHH
Confidence 3568999999998754 34665 555442 246999999999765322110 011123333444
Q ss_pred HHHHHHhccC--CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc
Q 025145 107 AHIANLLSTE--PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS 169 (257)
Q Consensus 107 ~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 169 (257)
..+.+.+... ...+++.|+||||||++|..++.+. +.++.+++++.|..|..
T Consensus 104 a~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~-----------p~rV~rItgLDPAgP~F 157 (442)
T TIGR03230 104 AKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLT-----------KHKVNRITGLDPAGPTF 157 (442)
T ss_pred HHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhC-----------CcceeEEEEEcCCCCcc
Confidence 4444444321 2235999999999999999998853 78899999998865543
No 124
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.29 E-value=5.3e-11 Score=90.42 Aligned_cols=201 Identities=15% Similarity=0.212 Sum_probs=112.8
Q ss_pred CceEEEEEccCCCCccchHHHhhcCC-CCce----EEEccCCCCCCcccCCC-------CcccccccCCCCCCCCCCchh
Q 025145 33 HQATIVWLHGLGDNGSSWSQLLESLP-LPNI----KWICPTAPTRPVAILGG-------FPCTAWFDVGELSDDGPEDWE 100 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~-~~g~----~v~~~d~~~~g~~~~~g-------~~~~~w~~~~~~~~~~~~~~~ 100 (257)
...+.||+||++++...+..+++.+. +.+. -++-++.-|+ -...| .+.-. .. .+.+......
T Consensus 10 ~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~--v~~~G~~~~~~~nPiIq---V~-F~~n~~~~~~ 83 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGK--VKVSGKLSKNAKNPIIQ---VN-FEDNRNANYK 83 (255)
T ss_dssp S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSE--EEEES---TT-SS-EEE---EE-ESSTT-CHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCe--EEEeeecCCCCCCCEEE---EE-ecCCCcCCHH
Confidence 44589999999999999998888774 3332 2333332221 11111 11000 00 0111112344
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhh-------
Q 025145 101 GLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLR------- 173 (257)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~------- 173 (257)
....++..+...+++...-.++-+|||||||..++.++...... ..-+.+..+|.+++.+.......
T Consensus 84 ~qa~wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~------~~~P~l~K~V~Ia~pfng~~~~~~~~~~~~ 157 (255)
T PF06028_consen 84 KQAKWLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGND------KNLPKLNKLVTIAGPFNGILGMNDDQNQND 157 (255)
T ss_dssp HHHHHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTG------TTS-EEEEEEEES--TTTTTCCSC-TTTT-
T ss_pred HHHHHHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccC------CCCcccceEEEeccccCccccccccchhhh
Confidence 45566666666666665556999999999999999999864211 11346888998887654332111
Q ss_pred ----------hccccchHH--HhhhcCCCEEEEccC------CCCcccchhhHHHHHHhhhcCceeeEEEEecC--CCCc
Q 025145 174 ----------NKIEGSHEA--ARRAASLPILLTHGL------CDDVVPYKYGEKSANCLSISGFRHLTFKSFEG--LGHY 233 (257)
Q Consensus 174 ----------~~~~~~~~~--~~~~~~~P~l~~~G~------~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g--~~H~ 233 (257)
..+...... ..-...+.+|-|.|. .|..||...+..+...++.... ..+-.++.| +.|.
T Consensus 158 ~~~~gp~~~~~~y~~l~~~~~~~~p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~-~Y~e~~v~G~~a~HS 236 (255)
T PF06028_consen 158 LNKNGPKSMTPMYQDLLKNRRKNFPKNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAK-SYQEKTVTGKDAQHS 236 (255)
T ss_dssp CSTT-BSS--HHHHHHHHTHGGGSTTT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSS-EEEEEEEESGGGSCC
T ss_pred hcccCCcccCHHHHHHHHHHHhhCCCCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccC-ceEEEEEECCCCccc
Confidence 000000000 112235679999999 8999999998888888876433 556666654 5787
Q ss_pred cC---HHHHHHHHHHH
Q 025145 234 TV---PKEMDEVCNWL 246 (257)
Q Consensus 234 ~~---~~~~~~~~~~l 246 (257)
-. ++..+.|.+||
T Consensus 237 ~LheN~~V~~~I~~FL 252 (255)
T PF06028_consen 237 QLHENPQVDKLIIQFL 252 (255)
T ss_dssp GGGCCHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHh
Confidence 65 44556777776
No 125
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.24 E-value=4.8e-11 Score=103.00 Aligned_cols=109 Identities=11% Similarity=0.040 Sum_probs=72.1
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcc------cc-cccC-CCCCCCCCCchhhHHH
Q 025145 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPC------TA-WFDV-GELSDDGPEDWEGLDA 104 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~------~~-w~~~-~~~~~~~~~~~~~~~~ 104 (257)
..|+|||+||++++...|..+++.|+..||+|+++|+|+||.+....... .+ +... ....-..++..++...
T Consensus 448 g~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~ 527 (792)
T TIGR03502 448 GWPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSIL 527 (792)
T ss_pred CCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHH
Confidence 34699999999999999999999998889999999999998774321100 00 0000 0000011223444444
Q ss_pred HHHHHHHHhc------cC------CCCceEEEEEechhHHHHHHHHHhc
Q 025145 105 SAAHIANLLS------TE------PADVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 105 ~~~~~~~~~~------~~------~~~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
++..+...+. .. .+..+++++||||||.++..++...
T Consensus 528 Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 528 DLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred HHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 5555555554 11 2235999999999999999999853
No 126
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.23 E-value=1.1e-10 Score=83.24 Aligned_cols=165 Identities=17% Similarity=0.127 Sum_probs=102.2
Q ss_pred eEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhc
Q 025145 35 ATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLS 114 (257)
Q Consensus 35 ~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (257)
-.+||+-|=|+....-..+++.|+++|+.|+.+|.+. .-| .....++...++..+.+...
T Consensus 3 t~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~-----------Yfw---------~~rtP~~~a~Dl~~~i~~y~ 62 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLR-----------YFW---------SERTPEQTAADLARIIRHYR 62 (192)
T ss_pred EEEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHH-----------HHh---------hhCCHHHHHHHHHHHHHHHH
Confidence 3688999988877666779999999999999999541 112 12234444444444444444
Q ss_pred cCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc--hhhhhcc------c--cchHHHh
Q 025145 115 TEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS--RNLRNKI------E--GSHEAAR 184 (257)
Q Consensus 115 ~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~------~--~~~~~~~ 184 (257)
+.....+++|+|+|+|+-+.-....+.+. ....++..++++++..... -....++ . .......
T Consensus 63 ~~w~~~~vvLiGYSFGADvlP~~~nrLp~-------~~r~~v~~v~Ll~p~~~~dFeihv~~wlg~~~~~~~~~~~pei~ 135 (192)
T PF06057_consen 63 ARWGRKRVVLIGYSFGADVLPFIYNRLPA-------ALRARVAQVVLLSPSTTADFEIHVSGWLGMGGDDAAYPVIPEIA 135 (192)
T ss_pred HHhCCceEEEEeecCCchhHHHHHhhCCH-------HHHhheeEEEEeccCCcceEEEEhhhhcCCCCCcccCCchHHHH
Confidence 44344599999999999888888876532 2356788888877532110 0000010 0 0111223
Q ss_pred hhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHH
Q 025145 185 RAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPK 237 (257)
Q Consensus 185 ~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~ 237 (257)
+....|+++|+|++|.-. ++..++.. +++.+.+|| ||.+..+
T Consensus 136 ~l~~~~v~CiyG~~E~d~-------~cp~l~~~---~~~~i~lpG-gHHfd~d 177 (192)
T PF06057_consen 136 KLPPAPVQCIYGEDEDDS-------LCPSLRQP---GVEVIALPG-GHHFDGD 177 (192)
T ss_pred hCCCCeEEEEEcCCCCCC-------cCccccCC---CcEEEEcCC-CcCCCCC
Confidence 334579999999988642 22223333 679999997 7776643
No 127
>COG0627 Predicted esterase [General function prediction only]
Probab=99.22 E-value=8.2e-10 Score=86.48 Aligned_cols=209 Identities=21% Similarity=0.222 Sum_probs=129.0
Q ss_pred CCCceEEEEEccCCCCccch---HHHhhcCCCCceEEEccCCCCCCcccCCC-----CcccccccCCCCCCC--CCCchh
Q 025145 31 GKHQATIVWLHGLGDNGSSW---SQLLESLPLPNIKWICPTAPTRPVAILGG-----FPCTAWFDVGELSDD--GPEDWE 100 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~---~~~~~~l~~~g~~v~~~d~~~~g~~~~~g-----~~~~~w~~~~~~~~~--~~~~~~ 100 (257)
+.+-|+++++||..++...+ ..+-+.....++.++++|...++...... -...+||........ .+..++
T Consensus 51 ~~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~ 130 (316)
T COG0627 51 GRDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWE 130 (316)
T ss_pred CCCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchh
Confidence 35678999999998886443 23445555689999998754332221110 001223322111110 012233
Q ss_pred hHHHHHHHHHHHhcc-CCCC---ceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhc-
Q 025145 101 GLDASAAHIANLLST-EPAD---VKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNK- 175 (257)
Q Consensus 101 ~~~~~~~~~~~~~~~-~~~~---~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~- 175 (257)
++ ....+...+.+ .... .+.+++||||||+-|+.+|.++ |+++..+..++|.+.........
T Consensus 131 tf--l~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~-----------pd~f~~~sS~Sg~~~~s~~~~~~~ 197 (316)
T COG0627 131 TF--LTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKH-----------PDRFKSASSFSGILSPSSPWGPTL 197 (316)
T ss_pred HH--HHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhC-----------cchhceeccccccccccccccccc
Confidence 22 23344433332 2212 2789999999999999999954 78999999988877655111110
Q ss_pred -----------------------cccchHHHh-----hh---------cCCCEEEEccCCCCccc--chhhHHHHHHhhh
Q 025145 176 -----------------------IEGSHEAAR-----RA---------ASLPILLTHGLCDDVVP--YKYGEKSANCLSI 216 (257)
Q Consensus 176 -----------------------~~~~~~~~~-----~~---------~~~P~l~~~G~~D~~v~--~~~~~~~~~~l~~ 216 (257)
....+.... .. ...++++-+|..|.+.. ....+.+.+++.+
T Consensus 198 ~~~~~~g~~~~~~~~G~~~~~~w~~~D~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~ 277 (316)
T COG0627 198 AMGDPWGGKAFNAMLGPDSDPAWQENDPLSLIEKLVANANTRIWVYGGSPPELLIDNGPADFFLAANNLSTRAFAEALRA 277 (316)
T ss_pred cccccccCccHHHhcCCCccccccccCchhHHHHhhhcccccceecccCCCccccccccchhhhhhcccCHHHHHHHHHh
Confidence 001111111 11 45778888999998875 3346889999998
Q ss_pred cCceeeEEEEecCCCCccC--HHHHHHHHHHHHHhcCcC
Q 025145 217 SGFRHLTFKSFEGLGHYTV--PKEMDEVCNWLTARLGLE 253 (257)
Q Consensus 217 ~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l~~~l~~~ 253 (257)
.|. +..+...++.+|... ...++....|+.+.+...
T Consensus 278 ~g~-~~~~~~~~~G~Hsw~~w~~~l~~~~~~~a~~l~~~ 315 (316)
T COG0627 278 AGI-PNGVRDQPGGDHSWYFWASQLADHLPWLAGALGLA 315 (316)
T ss_pred cCC-CceeeeCCCCCcCHHHHHHHHHHHHHHHHHHhccC
Confidence 887 667777788899764 788999999999887653
No 128
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.22 E-value=2.9e-10 Score=85.52 Aligned_cols=153 Identities=18% Similarity=0.178 Sum_probs=86.7
Q ss_pred CceEEEEEccCCCCccchHHHhhcC--------CCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHH
Q 025145 33 HQATIVWLHGLGDNGSSWSQLLESL--------PLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDA 104 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l--------~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 104 (257)
.+.+|||+||.+++...++.++..+ ....+.+++.|+........ | .......+.+.+
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~-g-------------~~l~~q~~~~~~ 68 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFH-G-------------RTLQRQAEFLAE 68 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccc-c-------------ccHHHHHHHHHH
Confidence 3568999999999988877766554 13468888888653211000 0 001122334445
Q ss_pred HHHHHHHHhcc-CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch-----hhhhcccc
Q 025145 105 SAAHIANLLST-EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR-----NLRNKIEG 178 (257)
Q Consensus 105 ~~~~~~~~~~~-~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~~~~~ 178 (257)
.+..+.+.... .....+|+|+||||||.++-.++.... ..+..+..+|.++.+.-... .+...+..
T Consensus 69 ~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~--------~~~~~v~~iitl~tPh~g~~~~~d~~~~~~y~~ 140 (225)
T PF07819_consen 69 AIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPN--------YDPDSVKTIITLGTPHRGSPLAFDRSLDRFYKR 140 (225)
T ss_pred HHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccc--------cccccEEEEEEEcCCCCCccccchHHHHHHHHH
Confidence 55555554422 234469999999999999998887431 11357899998875432221 11111111
Q ss_pred chHHHh-------hhcCCCEE-EEccCCCCcccchhh
Q 025145 179 SHEAAR-------RAASLPIL-LTHGLCDDVVPYKYG 207 (257)
Q Consensus 179 ~~~~~~-------~~~~~P~l-~~~G~~D~~v~~~~~ 207 (257)
...... ....+.++ +.-|..|..++.+..
T Consensus 141 ~~~~~~~~~~~~~~~~~v~~vSi~gG~~D~~v~~~~t 177 (225)
T PF07819_consen 141 LNNFWRKNYSPADSLRDVTVVSIAGGIRDTLVPSDLT 177 (225)
T ss_pred HHHHHHHhcccccccCCceEEEecCCccccccccccc
Confidence 111111 12345555 445789999887654
No 129
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.19 E-value=2.2e-10 Score=86.42 Aligned_cols=128 Identities=22% Similarity=0.264 Sum_probs=79.7
Q ss_pred CceEEeCCC-CCCceEEEEEccCCCCccchHHHh--hcCC-CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCC
Q 025145 22 GRTHVVRPK-GKHQATIVWLHGLGDNGSSWSQLL--ESLP-LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPE 97 (257)
Q Consensus 22 ~~~~~~~~~-~~~~~~vi~~HG~~~~~~~~~~~~--~~l~-~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~ 97 (257)
..+++.++. .++.|+||.+||.+++...+.... +.++ ..||.|+.||.-.. .-+......||... ....
T Consensus 48 ~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~---~wn~~~~~~~~~p~----~~~~ 120 (312)
T COG3509 48 SYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDR---AWNANGCGNWFGPA----DRRR 120 (312)
T ss_pred ceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCcccc---ccCCCcccccCCcc----cccC
Confidence 344544544 345589999999998887654433 3333 57999999973211 01122223343221 1122
Q ss_pred chhhHHHHHHHHHHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCC
Q 025145 98 DWEGLDASAAHIANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLP 167 (257)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 167 (257)
...++....+.+..++.+. .++.+|++.|.|-||.++..++.. +++.+.++..+++..+
T Consensus 121 g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~-----------~p~~faa~A~VAg~~~ 180 (312)
T COG3509 121 GVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACE-----------YPDIFAAIAPVAGLLA 180 (312)
T ss_pred CccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhc-----------CcccccceeeeecccC
Confidence 3334444444444555444 344699999999999999999984 5899999988888663
No 130
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.18 E-value=8e-10 Score=80.35 Aligned_cols=215 Identities=14% Similarity=0.105 Sum_probs=117.2
Q ss_pred cCCCCCceEEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCC
Q 025145 17 RTFEFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGP 96 (257)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~ 96 (257)
++..++.... +..++....|+.--+.|--...|++++...+..||.|+..|+||.|.+...+.....|- .. +
T Consensus 14 DG~~l~~~~~-pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~-~~------D 85 (281)
T COG4757 14 DGYSLPGQRF-PADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWR-YL------D 85 (281)
T ss_pred CCccCccccc-cCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccc-hh------h
Confidence 3444444433 33333333455555555555668889999999999999999998766554443322320 00 0
Q ss_pred CchhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccC-C--CCC----C--CcccccceEEEeccCCC
Q 025145 97 EDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGR-Y--GNG----I--PYYVNLRAVVGLSGWLP 167 (257)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~-~--~~~----~--~~~~~~~~~i~~~~~~~ 167 (257)
-...++...++.+.+.+ ..-+...+|||+||.+...+..+..... . ..+ . ...+++..+.+++-..+
T Consensus 86 wA~~D~~aal~~~~~~~----~~~P~y~vgHS~GGqa~gL~~~~~k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p 161 (281)
T COG4757 86 WARLDFPAALAALKKAL----PGHPLYFVGHSFGGQALGLLGQHPKYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVGP 161 (281)
T ss_pred hhhcchHHHHHHHHhhC----CCCceEEeeccccceeecccccCcccceeeEeccccccccchhhhhcccceeecccccc
Confidence 11223333333333332 2338999999999998877765320000 0 000 0 00011111111110000
Q ss_pred Cc-----------------------hhhhhccc-----------cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHH
Q 025145 168 GS-----------------------RNLRNKIE-----------GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANC 213 (257)
Q Consensus 168 ~~-----------------------~~~~~~~~-----------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~ 213 (257)
.. +....+.+ ...........+|+..+...+|+.+|....+.+.+.
T Consensus 162 ~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~ 241 (281)
T COG4757 162 PLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASF 241 (281)
T ss_pred chhhccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHh
Confidence 00 00000000 111234566799999999999999999999999999
Q ss_pred hhhcCceeeEEEEecC----CCCccC-----HHHHHHHHHHH
Q 025145 214 LSISGFRHLTFKSFEG----LGHYTV-----PKEMDEVCNWL 246 (257)
Q Consensus 214 l~~~~~~~~~~~~~~g----~~H~~~-----~~~~~~~~~~l 246 (257)
.+++ +.+.+.++- .||+-. ...++++++|+
T Consensus 242 y~nA---pl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 242 YRNA---PLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred hhcC---cccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 9877 556666653 478643 23457777765
No 131
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.18 E-value=2.4e-10 Score=87.69 Aligned_cols=179 Identities=16% Similarity=0.105 Sum_probs=69.2
Q ss_pred CceEEEEEccCCCCccc---hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025145 33 HQATIVWLHGLGDNGSS---WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~---~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
+...|||+-|.+..... ...+++.|...+|.++-+.+.- .+.|++. .++++++++|
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsS----Sy~G~G~-----------------~SL~~D~~eI 90 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSS----SYSGWGT-----------------SSLDRDVEEI 90 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GG----GBTTS-S-------------------HHHHHHHH
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecC----ccCCcCc-----------------chhhhHHHHH
Confidence 55699999998875443 5568888877899999998651 2223221 1223333332
Q ss_pred H---HHhccC----CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc------h---hhh
Q 025145 110 A---NLLSTE----PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS------R---NLR 173 (257)
Q Consensus 110 ~---~~~~~~----~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~---~~~ 173 (257)
. ++++.. ....+|+|+|||-|+.-++.++.+.... .....+.++|+-+|.-+.. . .+.
T Consensus 91 ~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~------~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~ 164 (303)
T PF08538_consen 91 AQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPS------PSRPPVDGAILQAPVSDREAILNFLGEREAYE 164 (303)
T ss_dssp HHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---------CCCEEEEEEEEE---TTSTTTSHHH---HH
T ss_pred HHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCcc------ccccceEEEEEeCCCCChhHhhhcccchHHHH
Confidence 2 222222 1345999999999999999999864110 0146789998877632110 0 000
Q ss_pred hcc----------------------------------------------------cc-chHHHhhhcCCCEEEEccCCCC
Q 025145 174 NKI----------------------------------------------------EG-SHEAARRAASLPILLTHGLCDD 200 (257)
Q Consensus 174 ~~~----------------------------------------------------~~-~~~~~~~~~~~P~l~~~G~~D~ 200 (257)
+.+ .. .-......+..|+|++.+.+|+
T Consensus 165 ~~v~~A~~~i~~g~~~~~lp~~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DE 244 (303)
T PF08538_consen 165 ELVALAKELIAEGKGDEILPREFTPLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDE 244 (303)
T ss_dssp HHHHHHHHHHHCT-TT-GG----GGTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT
T ss_pred HHHHHHHHHHHcCCCCceeeccccccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCc
Confidence 000 00 0001334567899999999999
Q ss_pred cccchh-hHHHHHHhhhcCce---eeEEEEecCCCCccCHHH
Q 025145 201 VVPYKY-GEKSANCLSISGFR---HLTFKSFEGLGHYTVPKE 238 (257)
Q Consensus 201 ~v~~~~-~~~~~~~l~~~~~~---~~~~~~~~g~~H~~~~~~ 238 (257)
.||... .+.+.++++.+-.+ ...-.++||++|.+..+.
T Consensus 245 yvP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~ 286 (303)
T PF08538_consen 245 YVPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPS 286 (303)
T ss_dssp ------------------------------------------
T ss_pred eecccccccccccccccccccccccccccccccccccccccc
Confidence 999653 35566666543210 123558899999987443
No 132
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.17 E-value=1.2e-09 Score=88.09 Aligned_cols=203 Identities=11% Similarity=0.082 Sum_probs=125.4
Q ss_pred CCCCceEEeCCCCCC----ceEEEEEccCCCCccch-HHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCC
Q 025145 19 FEFGRTHVVRPKGKH----QATIVWLHGLGDNGSSW-SQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSD 93 (257)
Q Consensus 19 ~~~~~~~~~~~~~~~----~~~vi~~HG~~~~~~~~-~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~ 93 (257)
..+...+.+.+.... .|+||++.-+.++.... +.+.+.|.. |+.|+..|... .+..
T Consensus 83 ~~~~~L~~y~~~~~~~~~~~~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~----------------p~~v-- 143 (406)
T TIGR01849 83 KPFCRLIHFKRQGFRAELPGPAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVN----------------ARMV-- 143 (406)
T ss_pred CCCeEEEEECCCCcccccCCCcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCC----------------CCCC--
Confidence 344556666655322 36888888877665543 558888876 99999998531 1100
Q ss_pred CCCCchhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh--
Q 025145 94 DGPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN-- 171 (257)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-- 171 (257)
+.....-++++.++.+.++++.. .. ++.|+|.|+||..++.+++..... ..|..++.++++.+.++....
T Consensus 144 p~~~~~f~ldDYi~~l~~~i~~~-G~-~v~l~GvCqgG~~~laa~Al~a~~------~~p~~~~sltlm~~PID~~~~p~ 215 (406)
T TIGR01849 144 PLSAGKFDLEDYIDYLIEFIRFL-GP-DIHVIAVCQPAVPVLAAVALMAEN------EPPAQPRSMTLMGGPIDARASPT 215 (406)
T ss_pred chhcCCCCHHHHHHHHHHHHHHh-CC-CCcEEEEchhhHHHHHHHHHHHhc------CCCCCcceEEEEecCccCCCCCc
Confidence 00112334566667777777655 33 499999999999988777653211 113346666665554322110
Q ss_pred -------------hhh--------------------------------------------cc-ccc--------------
Q 025145 172 -------------LRN--------------------------------------------KI-EGS-------------- 179 (257)
Q Consensus 172 -------------~~~--------------------------------------------~~-~~~-------------- 179 (257)
+.+ .+ ...
T Consensus 216 ~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y 295 (406)
T TIGR01849 216 VVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQLAGFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEY 295 (406)
T ss_pred hHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHHHHHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHh
Confidence 000 00 000
Q ss_pred ---------------------------------hHHHhhhcC-CCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEE
Q 025145 180 ---------------------------------HEAARRAAS-LPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFK 225 (257)
Q Consensus 180 ---------------------------------~~~~~~~~~-~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~ 225 (257)
.......++ +|++.+-|+.|.++|++++..+.+.+...+..+.+.+
T Consensus 296 ~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~ 375 (406)
T TIGR01849 296 LAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRVDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHH 375 (406)
T ss_pred hhccCCcHHHHHHHHHHHHHhCCccCCcEEECCEEecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEe
Confidence 000345677 9999999999999999999988888633222256677
Q ss_pred EecCCCCccC-------HHHHHHHHHHHHH
Q 025145 226 SFEGLGHYTV-------PKEMDEVCNWLTA 248 (257)
Q Consensus 226 ~~~g~~H~~~-------~~~~~~~~~~l~~ 248 (257)
..+++||.-. .+.+..+.+||.+
T Consensus 376 ~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 376 LQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred ecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 8877899632 5567888888875
No 133
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.14 E-value=4.4e-09 Score=82.20 Aligned_cols=118 Identities=16% Similarity=0.166 Sum_probs=74.2
Q ss_pred CCceEEEEEccCCCCccc-----------hHHHh---hcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCC
Q 025145 32 KHQATIVWLHGLGDNGSS-----------WSQLL---ESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPE 97 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~-----------~~~~~---~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~ 97 (257)
....+|+++|++.++... |..++ +.+.-..|-||+.|..|...+... ++-....+......-
T Consensus 49 ~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStg----P~s~~p~g~~yg~~F 124 (368)
T COG2021 49 EKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTG----PSSINPGGKPYGSDF 124 (368)
T ss_pred cCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCC----CCCcCCCCCccccCC
Confidence 345699999999985543 33322 234457799999998765422211 110000111111122
Q ss_pred chhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEecc
Q 025145 98 DWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSG 164 (257)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 164 (257)
+..++.+++..-..+++......=..++|-||||+.++.++.. ||+++..++.+++
T Consensus 125 P~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~-----------yPd~V~~~i~ia~ 180 (368)
T COG2021 125 PVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIR-----------YPDRVRRAIPIAT 180 (368)
T ss_pred CcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHh-----------ChHHHhhhheecc
Confidence 3456677777766677776666334599999999999999995 5888888877765
No 134
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=99.11 E-value=2.2e-10 Score=88.34 Aligned_cols=129 Identities=24% Similarity=0.315 Sum_probs=81.3
Q ss_pred HHHHHHHHhccCCCC--ceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhc------c
Q 025145 105 SAAHIANLLSTEPAD--VKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNK------I 176 (257)
Q Consensus 105 ~~~~~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~------~ 176 (257)
..+.|..++++.... .+.+|+|+||||+.|+.++.++ |+.+.+++++||.+.....+... .
T Consensus 98 l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~-----------Pd~F~~~~~~S~~~~~~~~~w~~~~~~~~~ 166 (251)
T PF00756_consen 98 LTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRH-----------PDLFGAVIAFSGALDPSPSLWGPSDDEAWK 166 (251)
T ss_dssp HHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHS-----------TTTESEEEEESEESETTHCHHHHSTCGHHG
T ss_pred hhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhC-----------ccccccccccCccccccccccCcCCcHHhh
Confidence 445566666654322 2389999999999999999965 99999999999875433111100 0
Q ss_pred cc-----chHHHhhhcCCCEEEEccCCCCcccc----------hhhHHHHHHhhhcCceeeEEEEecCCCCccC--HHHH
Q 025145 177 EG-----SHEAARRAASLPILLTHGLCDDVVPY----------KYGEKSANCLSISGFRHLTFKSFEGLGHYTV--PKEM 239 (257)
Q Consensus 177 ~~-----~~~~~~~~~~~P~l~~~G~~D~~v~~----------~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~--~~~~ 239 (257)
.. ...........++++..|+.|..... +....+.+.+...+. ...+..++| +|... ...+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~i~l~~G~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~-~~~~~~~~G-~H~~~~W~~~l 244 (251)
T PF00756_consen 167 ENDPFDLIKALSQKKKPLRIYLDVGTKDEFGGWEDSAQILQFLANNRELAQLLKAKGI-PHTYHVFPG-GHDWAYWRRRL 244 (251)
T ss_dssp GCHHHHHHHHHHHTTSEEEEEEEEETTSTTHHCSHHHHHHHHHHHHHHHHHHCCCEEC-TTESEEEHS-ESSHHHHHHHH
T ss_pred hccHHHHhhhhhcccCCCeEEEEeCCCCcccccccCHHHHHHHHHhHhhHHHHHHcCC-CceEEEecC-ccchhhHHHHH
Confidence 01 11112344567889999999984321 233445555655555 668888895 78653 5555
Q ss_pred HHHHHHH
Q 025145 240 DEVCNWL 246 (257)
Q Consensus 240 ~~~~~~l 246 (257)
...+.|+
T Consensus 245 ~~~L~~~ 251 (251)
T PF00756_consen 245 PDALPWM 251 (251)
T ss_dssp HHHHHHH
T ss_pred HHHHhhC
Confidence 6655554
No 135
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.10 E-value=2e-10 Score=71.14 Aligned_cols=71 Identities=14% Similarity=0.224 Sum_probs=55.3
Q ss_pred EeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025145 26 VVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 26 ~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
.+.|.++++.+|+++||++++...|..+++.|+++||.|+++|++|||.+... .....++.+.
T Consensus 8 ~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~-----------------rg~~~~~~~~ 70 (79)
T PF12146_consen 8 RWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGK-----------------RGHIDSFDDY 70 (79)
T ss_pred EecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCc-----------------ccccCCHHHH
Confidence 44555557899999999999999999999999999999999999998866421 1124455666
Q ss_pred HHHHHHHh
Q 025145 106 AAHIANLL 113 (257)
Q Consensus 106 ~~~~~~~~ 113 (257)
++++..++
T Consensus 71 v~D~~~~~ 78 (79)
T PF12146_consen 71 VDDLHQFI 78 (79)
T ss_pred HHHHHHHh
Confidence 77776655
No 136
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.09 E-value=1.3e-09 Score=85.00 Aligned_cols=177 Identities=16% Similarity=0.104 Sum_probs=107.0
Q ss_pred CCceEEEEEccCCCCccchHH--HhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCc---hhhHHHHH
Q 025145 32 KHQATIVWLHGLGDNGSSWSQ--LLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPED---WEGLDASA 106 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~--~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~---~~~~~~~~ 106 (257)
+.+|++|.+.|-|++....+. ++..|.+.|+..+.+..|++|........... -....+- -......+
T Consensus 90 ~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~-------l~~VsDl~~~g~~~i~E~ 162 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSS-------LRNVSDLFVMGRATILES 162 (348)
T ss_pred CCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhccc-------ccchhHHHHHHhHHHHHH
Confidence 568899999998886544332 36777778999999999977654433211000 0000000 01223344
Q ss_pred HHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCC----------C---chhhh
Q 025145 107 AHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLP----------G---SRNLR 173 (257)
Q Consensus 107 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----------~---~~~~~ 173 (257)
..+..+++.+... ++++.|.||||.+|...+... |..+..+-++++... . .+.+.
T Consensus 163 ~~Ll~Wl~~~G~~-~~g~~G~SmGG~~A~laa~~~-----------p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~ 230 (348)
T PF09752_consen 163 RALLHWLEREGYG-PLGLTGISMGGHMAALAASNW-----------PRPVALVPCLSWSSASVVFTEGVLSNSINWDALE 230 (348)
T ss_pred HHHHHHHHhcCCC-ceEEEEechhHhhHHhhhhcC-----------CCceeEEEeecccCCCcchhhhhhhcCCCHHHHH
Confidence 5566677766444 999999999999999999854 444444433332110 0 00000
Q ss_pred hcc--------------------------ccchHH------------------HhhhcCCCEEEEccCCCCcccchhhHH
Q 025145 174 NKI--------------------------EGSHEA------------------ARRAASLPILLTHGLCDDVVPYKYGEK 209 (257)
Q Consensus 174 ~~~--------------------------~~~~~~------------------~~~~~~~P~l~~~G~~D~~v~~~~~~~ 209 (257)
..+ ...... ........++++.+++|.+||.+....
T Consensus 231 ~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~ 310 (348)
T PF09752_consen 231 KQFEDTVYEEEISDIPAQNKSLPLDSMEERRRDREALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLS 310 (348)
T ss_pred HHhcccchhhhhcccccCcccccchhhccccchHHHHHHHHHHHHhhccccccCCCCCCCcEEEEEecCceEechhhcch
Confidence 000 000000 001123348999999999999988888
Q ss_pred HHHHhhhcCceeeEEEEecCCCCc
Q 025145 210 SANCLSISGFRHLTFKSFEGLGHY 233 (257)
Q Consensus 210 ~~~~l~~~~~~~~~~~~~~g~~H~ 233 (257)
+.+..+ .+++..++| ||.
T Consensus 311 Lq~~WP-----GsEvR~l~g-GHV 328 (348)
T PF09752_consen 311 LQEIWP-----GSEVRYLPG-GHV 328 (348)
T ss_pred HHHhCC-----CCeEEEecC-CcE
Confidence 888887 678888997 995
No 137
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.09 E-value=6e-10 Score=89.61 Aligned_cols=117 Identities=17% Similarity=0.133 Sum_probs=74.2
Q ss_pred CCCCceEEEEEccCCCCccchH------HHhhcCCCCceEEEccCCCCCCcccCCCC-----ccccc-ccCCCCCCCCCC
Q 025145 30 KGKHQATIVWLHGLGDNGSSWS------QLLESLPLPNIKWICPTAPTRPVAILGGF-----PCTAW-FDVGELSDDGPE 97 (257)
Q Consensus 30 ~~~~~~~vi~~HG~~~~~~~~~------~~~~~l~~~g~~v~~~d~~~~g~~~~~g~-----~~~~w-~~~~~~~~~~~~ 97 (257)
.+.++|+|++.||.-.++..|- .++-.|+++||.|-.-+.||-..+...-. ...-| |+.. ..
T Consensus 69 ~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~------Em 142 (403)
T KOG2624|consen 69 GKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWH------EM 142 (403)
T ss_pred CCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCCcCCcceeecchh------hh
Confidence 3378899999999999998884 35566778999999999886544332211 00112 1110 11
Q ss_pred chhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEecc
Q 025145 98 DWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSG 164 (257)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 164 (257)
..+++.+.++.+.+.. ...++..+|||+|+.....+++..+ .+..+++..++++|
T Consensus 143 ~~yDLPA~IdyIL~~T----~~~kl~yvGHSQGtt~~fv~lS~~p--------~~~~kI~~~~aLAP 197 (403)
T KOG2624|consen 143 GTYDLPAMIDYILEKT----GQEKLHYVGHSQGTTTFFVMLSERP--------EYNKKIKSFIALAP 197 (403)
T ss_pred hhcCHHHHHHHHHHhc----cccceEEEEEEccchhheehhcccc--------hhhhhhheeeeecc
Confidence 2334444455544433 3459999999999999998887542 23345666666655
No 138
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.08 E-value=2.4e-09 Score=87.87 Aligned_cols=100 Identities=22% Similarity=0.203 Sum_probs=77.6
Q ss_pred CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHHhhhcCCCEEEEccC
Q 025145 118 ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGL 197 (257)
Q Consensus 118 ~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~G~ 197 (257)
...+|+|+|.|||+.+++..... .....+.++|+++-.+...+.-. ...+......+.|+|++.|.
T Consensus 248 pha~IiLvGrsmGAlVachVSps----------nsdv~V~~vVCigypl~~vdgpr----girDE~Lldmk~PVLFV~Gs 313 (784)
T KOG3253|consen 248 PHAPIILVGRSMGALVACHVSPS----------NSDVEVDAVVCIGYPLDTVDGPR----GIRDEALLDMKQPVLFVIGS 313 (784)
T ss_pred CCCceEEEecccCceeeEEeccc----------cCCceEEEEEEecccccCCCccc----CCcchhhHhcCCceEEEecC
Confidence 33599999999998888887763 23445999999875544333211 23444556679999999999
Q ss_pred CCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC
Q 025145 198 CDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV 235 (257)
Q Consensus 198 ~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 235 (257)
+|..++.+..+++.+++++ ..+++++.+++|.+-
T Consensus 314 nd~mcspn~ME~vreKMqA----~~elhVI~~adhsma 347 (784)
T KOG3253|consen 314 NDHMCSPNSMEEVREKMQA----EVELHVIGGADHSMA 347 (784)
T ss_pred CcccCCHHHHHHHHHHhhc----cceEEEecCCCcccc
Confidence 9999999999999999986 678999999999764
No 139
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=99.04 E-value=1.3e-07 Score=74.58 Aligned_cols=214 Identities=14% Similarity=0.066 Sum_probs=123.2
Q ss_pred CCCCceEEeCCCCCCceEEEEEccCCCCccc---hHHHhhcCCCCceEEEccCCCCCCcccCCCCccc--ccccCCC--C
Q 025145 19 FEFGRTHVVRPKGKHQATIVWLHGLGDNGSS---WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCT--AWFDVGE--L 91 (257)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~vi~~HG~~~~~~~---~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~--~w~~~~~--~ 91 (257)
..|...+.....+++..+||++||.+.+.+. ...+.+.|.+.||.++++..|.-......-.... .--.... .
T Consensus 72 ~~flaL~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~ 151 (310)
T PF12048_consen 72 ERFLALWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQL 151 (310)
T ss_pred EEEEEEEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCc
Confidence 3444445444556778899999999988753 4567888889999999988775110000000000 0000000 0
Q ss_pred CCC--------------CCCchhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccc
Q 025145 92 SDD--------------GPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLR 157 (257)
Q Consensus 92 ~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~ 157 (257)
... .......+...+..+..++++.... +++|+||+.|+..++.++... -...+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~-~ivlIg~G~gA~~~~~~la~~----------~~~~~d 220 (310)
T PF12048_consen 152 SQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGGK-NIVLIGHGTGAGWAARYLAEK----------PPPMPD 220 (310)
T ss_pred CCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCc-eEEEEEeChhHHHHHHHHhcC----------CCcccC
Confidence 000 0011223444455555666555433 699999999999999999853 244588
Q ss_pred eEEEeccCCCCchhhhhccccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC--
Q 025145 158 AVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV-- 235 (257)
Q Consensus 158 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-- 235 (257)
++|.++++.+....-.. -.......+.|||=|++.+. -.....+..=....+.....+.+-+.+.+..|...
T Consensus 221 aLV~I~a~~p~~~~n~~-----l~~~la~l~iPvLDi~~~~~-~~~~~~a~~R~~~a~r~~~~~YrQ~~L~~~~~~~~~~ 294 (310)
T PF12048_consen 221 ALVLINAYWPQPDRNPA-----LAEQLAQLKIPVLDIYSADN-PASQQTAKQRKQAAKRNKKPDYRQIQLPGLPDNPSGW 294 (310)
T ss_pred eEEEEeCCCCcchhhhh-----HHHHhhccCCCEEEEecCCC-hHHHHHHHHHHHHHHhccCCCceeEecCCCCCChhhH
Confidence 99999998876543111 11223457899999998873 32222221111112222112456666777666554
Q ss_pred HH-HHHHHHHHHHHh
Q 025145 236 PK-EMDEVCNWLTAR 249 (257)
Q Consensus 236 ~~-~~~~~~~~l~~~ 249 (257)
.+ ..++|..||.+.
T Consensus 295 ~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 295 QEQLLRRIRGWLKRH 309 (310)
T ss_pred HHHHHHHHHHHHHhh
Confidence 33 567788888653
No 140
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.98 E-value=4.4e-08 Score=72.21 Aligned_cols=197 Identities=16% Similarity=0.132 Sum_probs=116.8
Q ss_pred CCCCCCceEEEEEccCCCCccchHHHhhcCCC---CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHH
Q 025145 28 RPKGKHQATIVWLHGLGDNGSSWSQLLESLPL---PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDA 104 (257)
Q Consensus 28 ~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~---~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 104 (257)
...+.+++.++++.|..|....|..+++.|-. ....+..+-..+|-... -...........+..++.+
T Consensus 23 ~~~~~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P---------~sl~~~~s~~~~eifsL~~ 93 (301)
T KOG3975|consen 23 TKSGEDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMP---------ASLREDHSHTNEEIFSLQD 93 (301)
T ss_pred ccCCCCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCC---------cccccccccccccccchhh
Confidence 34456789999999999999999887776631 11334444433331100 0011111112334556677
Q ss_pred HHHHHHHHhccCCC-CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccC------------------
Q 025145 105 SAAHIANLLSTEPA-DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGW------------------ 165 (257)
Q Consensus 105 ~~~~~~~~~~~~~~-~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~------------------ 165 (257)
.++.-.+++++... +.+++++|||-|+++.+.++... +..-.+..++++-|-
T Consensus 94 QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~---------k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~ 164 (301)
T KOG3975|consen 94 QVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSI---------KLVFSVQKAVLLFPTIERMHESPNGIRLTKVLR 164 (301)
T ss_pred HHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhc---------ccccceEEEEEecchHHHHhcCCCceEeeeeee
Confidence 77777788877654 35999999999999999998732 111122222222210
Q ss_pred -------------C-CCchhhhh-----------------------------------------ccccchHHHhhhcCCC
Q 025145 166 -------------L-PGSRNLRN-----------------------------------------KIEGSHEAARRAASLP 190 (257)
Q Consensus 166 -------------~-~~~~~~~~-----------------------------------------~~~~~~~~~~~~~~~P 190 (257)
. +.+..... ...............-
T Consensus 165 ~~~hv~~lt~yi~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~~d~e~~een~d~ 244 (301)
T KOG3975|consen 165 YLPHVVSLTSYIYWILLPGFIRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTTRDIEYCEENLDS 244 (301)
T ss_pred eehhhhheeeeeeeecChHHHHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHHhHHHHHHhcCcE
Confidence 0 00000000 0000111234455788
Q ss_pred EEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHH
Q 025145 191 ILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWL 246 (257)
Q Consensus 191 ~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l 246 (257)
+.+.+|+.|..||.+....+.+.+++. ++++-+ +...|.+.....+.++.-+
T Consensus 245 l~Fyygt~DgW~p~~~~d~~kdd~~ee---d~~Lde-dki~HAFV~~~~q~ma~~v 296 (301)
T KOG3975|consen 245 LWFYYGTNDGWVPSHYYDYYKDDVPEE---DLKLDE-DKIPHAFVVKHAQYMANAV 296 (301)
T ss_pred EEEEccCCCCCcchHHHHHHhhhcchh---ceeecc-ccCCcceeecccHHHHHHH
Confidence 999999999999999999999999875 567766 7789998744444444333
No 141
>COG3150 Predicted esterase [General function prediction only]
Probab=98.95 E-value=2e-08 Score=69.38 Aligned_cols=158 Identities=18% Similarity=0.230 Sum_probs=92.6
Q ss_pred EEEEccCCCCccchHH--HhhcCCC--CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025145 37 IVWLHGLGDNGSSWSQ--LLESLPL--PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 37 vi~~HG~~~~~~~~~~--~~~~l~~--~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
||++||+.++..+... +.+.+.. ....+.++-+| ......++.+.+.
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~~~~i~y~~p~l~-----------------------------h~p~~a~~ele~~ 52 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDEDVRDIEYSTPHLP-----------------------------HDPQQALKELEKA 52 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhccccceeeecCCCC-----------------------------CCHHHHHHHHHHH
Confidence 8999999998887654 2233331 22333333322 2235567777777
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccch------------
Q 025145 113 LSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSH------------ 180 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~------------ 180 (257)
+.+.... ...|+|.|+||+.|..++.+. .+++++ +.|.+-..+.+...+.+..
T Consensus 53 i~~~~~~-~p~ivGssLGGY~At~l~~~~-------------Girav~-~NPav~P~e~l~gylg~~en~ytg~~y~le~ 117 (191)
T COG3150 53 VQELGDE-SPLIVGSSLGGYYATWLGFLC-------------GIRAVV-FNPAVRPYELLTGYLGRPENPYTGQEYVLES 117 (191)
T ss_pred HHHcCCC-CceEEeecchHHHHHHHHHHh-------------CChhhh-cCCCcCchhhhhhhcCCCCCCCCcceEEeeh
Confidence 7776555 689999999999999999854 344444 3333222222222221111
Q ss_pred -------HHHhhhc-CCCEEEEccC-CCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC--HHHHHHHHHHH
Q 025145 181 -------EAARRAA-SLPILLTHGL-CDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV--PKEMDEVCNWL 246 (257)
Q Consensus 181 -------~~~~~~~-~~P~l~~~G~-~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l 246 (257)
....... +...+.+... .|++.++..+.. .+. .+..++.+|.+|.+. ...++.|..|.
T Consensus 118 ~hI~~l~~~~~~~l~~p~~~~lL~qtgDEvLDyr~a~a---~y~-----~~~~~V~dgg~H~F~~f~~~l~~i~aF~ 186 (191)
T COG3150 118 RHIATLCVLQFRELNRPRCLVLLSQTGDEVLDYRQAVA---YYH-----PCYEIVWDGGDHKFKGFSRHLQRIKAFK 186 (191)
T ss_pred hhHHHHHHhhccccCCCcEEEeecccccHHHHHHHHHH---Hhh-----hhhheeecCCCccccchHHhHHHHHHHh
Confidence 1111222 3334444444 499988755544 443 345677788899986 56678888775
No 142
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.95 E-value=1.3e-08 Score=95.68 Aligned_cols=183 Identities=15% Similarity=0.083 Sum_probs=114.8
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025145 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
.+.++++||++++...|..+.+.|. .++.|+.++.|+++.. .....++.+.++.+.+.+
T Consensus 1068 ~~~l~~lh~~~g~~~~~~~l~~~l~-~~~~v~~~~~~g~~~~--------------------~~~~~~l~~la~~~~~~i 1126 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFSVLSRYLD-PQWSIYGIQSPRPDGP--------------------MQTATSLDEVCEAHLATL 1126 (1296)
T ss_pred CCCeEEecCCCCchHHHHHHHHhcC-CCCcEEEEECCCCCCC--------------------CCCCCCHHHHHHHHHHHH
Confidence 4679999999999999999999996 6799999998865311 011235566666666666
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch-------------hhhhc-----
Q 025145 114 STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR-------------NLRNK----- 175 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------------~~~~~----- 175 (257)
.......++.++|||+||.++..++.+... .+.++..++++.++.+... .+...
T Consensus 1127 ~~~~~~~p~~l~G~S~Gg~vA~e~A~~l~~--------~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1198 (1296)
T PRK10252 1127 LEQQPHGPYHLLGYSLGGTLAQGIAARLRA--------RGEEVAFLGLLDTWPPETQNWREKEANGLDPEVLAEIDRERE 1198 (1296)
T ss_pred HhhCCCCCEEEEEechhhHHHHHHHHHHHH--------cCCceeEEEEecCCCcccccccccccccCChhhhhhhhhhHH
Confidence 554333489999999999999999985321 1445666666554322110 00000
Q ss_pred -----c-ccc--------h----H-------HHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCC
Q 025145 176 -----I-EGS--------H----E-------AARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGL 230 (257)
Q Consensus 176 -----~-~~~--------~----~-------~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~ 230 (257)
. ... . . ........|+.++.+..|..........+.+.. . .++...++|
T Consensus 1199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~--~---~~~~~~v~g- 1272 (1296)
T PRK10252 1199 AFLAAQQGSLSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPEQAWSPWI--A---ELDVYRQDC- 1272 (1296)
T ss_pred HHHHhhhccccHHHHHHHHHHHHHHHHHHHhccCCcccCceEEEEcCCCCcccCCcccchhhhc--C---CCEEEECCC-
Confidence 0 000 0 0 011234678999999988765554444443332 2 567777875
Q ss_pred CCccC--HHHHHHHHHHHHHhcC
Q 025145 231 GHYTV--PKEMDEVCNWLTARLG 251 (257)
Q Consensus 231 ~H~~~--~~~~~~~~~~l~~~l~ 251 (257)
+|..+ .+....+.+++.+.+.
T Consensus 1273 ~H~~~~~~~~~~~~~~~l~~~l~ 1295 (1296)
T PRK10252 1273 AHVDIISPEAFEKIGPILRATLN 1295 (1296)
T ss_pred CHHHHCCcHHHHHHHHHHHHHhc
Confidence 89765 4556777777776543
No 143
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.94 E-value=8.1e-08 Score=76.31 Aligned_cols=186 Identities=13% Similarity=0.078 Sum_probs=109.2
Q ss_pred CceEEEEEccCCCCccchH-------HHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025145 33 HQATIVWLHGLGDNGSSWS-------QLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~-------~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
..|+||++||.|-...... .+...|. ...++++|+. ..........-..++.+.
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYs-----------------Lt~~~~~~~~yPtQL~ql 181 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYS-----------------LTSSDEHGHKYPTQLRQL 181 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEecc-----------------ccccccCCCcCchHHHHH
Confidence 4699999999774443322 2333443 5588888843 222111222335566777
Q ss_pred HHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch-------hhh-----
Q 025145 106 AAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR-------NLR----- 173 (257)
Q Consensus 106 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------~~~----- 173 (257)
++....+++.... ++|.|+|-|.||.+++.++....... . ...-+.+|++|||+.... .+.
T Consensus 182 v~~Y~~Lv~~~G~-~nI~LmGDSAGGnL~Ls~LqyL~~~~---~---~~~Pk~~iLISPWv~l~~~~~~~~~~~~~n~~~ 254 (374)
T PF10340_consen 182 VATYDYLVESEGN-KNIILMGDSAGGNLALSFLQYLKKPN---K---LPYPKSAILISPWVNLVPQDSQEGSSYHDNEKR 254 (374)
T ss_pred HHHHHHHHhccCC-CeEEEEecCccHHHHHHHHHHHhhcC---C---CCCCceeEEECCCcCCcCCCCCCCccccccccc
Confidence 7777777755544 49999999999999999887542211 1 123368999999965431 000
Q ss_pred h------------cc-cc--------------------chHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCce
Q 025145 174 N------------KI-EG--------------------SHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFR 220 (257)
Q Consensus 174 ~------------~~-~~--------------------~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~ 220 (257)
+ .+ .. ......-....-++++.|+++-+ .+...++.+.+...+..
T Consensus 255 D~l~~~~~~~~~~~y~~~~~~~~~~~~~~~~n~~~n~d~~~W~~I~~~~~vfVi~Ge~Evf--rddI~~~~~~~~~~~~~ 332 (374)
T PF10340_consen 255 DMLSYKGLSMFGDAYIGNNDPENDLNSLPFVNIEYNFDAEDWKDILKKYSVFVIYGEDEVF--RDDILEWAKKLNDVKPN 332 (374)
T ss_pred cccchhhHHHHHHhhccccccccccccCCccCcccCCChhHHHHhccCCcEEEEECCcccc--HHHHHHHHHHHhhcCcc
Confidence 0 00 00 00001112345799999998866 55688899998855421
Q ss_pred ----eeEEEEecCCCCccCH-HHHHHHHHHH
Q 025145 221 ----HLTFKSFEGLGHYTVP-KEMDEVCNWL 246 (257)
Q Consensus 221 ----~~~~~~~~g~~H~~~~-~~~~~~~~~l 246 (257)
..+..+-+++.|--+. .....+..|.
T Consensus 333 ~~~~~~nv~~~~~G~Hi~P~~~~~~~~~~W~ 363 (374)
T PF10340_consen 333 KFSNSNNVYIDEGGIHIGPILNYSRDLDKWS 363 (374)
T ss_pred ccCCcceEEEecCCccccchhhhhcCHHHHh
Confidence 2466777888886542 2234444444
No 144
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.92 E-value=9e-08 Score=70.82 Aligned_cols=201 Identities=16% Similarity=0.145 Sum_probs=116.5
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCc-----eEEEccCCCCCCcccCCC-------CcccccccCCCCCCCCCCchhh
Q 025145 34 QATIVWLHGLGDNGSSWSQLLESLPLPN-----IKWICPTAPTRPVAILGG-------FPCTAWFDVGELSDDGPEDWEG 101 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g-----~~v~~~d~~~~g~~~~~g-------~~~~~w~~~~~~~~~~~~~~~~ 101 (257)
.-+.||+||.+++......++..|...+ --++.+|..+. -...| ++.-. + .-+........
T Consensus 45 ~iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgs--lk~tGk~~Kd~~nP~I~---~--gfe~n~~s~~~ 117 (288)
T COG4814 45 AIPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGS--LKVTGKISKDAKNPIIE---F--GFEDNTASGLD 117 (288)
T ss_pred ccceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCc--EEEeeeecccCCCCeEE---E--EEecCcCchhh
Confidence 3478999999999999999988886333 23344443221 11111 11110 0 01112233445
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCC-----Cchhhhhcc
Q 025145 102 LDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLP-----GSRNLRNKI 176 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~ 176 (257)
...+...++..|+....-.++-++||||||.....++..... ...+ +.+...+++.+.+. ..+...+..
T Consensus 118 ~s~wlk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~-----dks~-P~lnK~V~l~gpfN~~~l~~de~v~~v~ 191 (288)
T COG4814 118 QSKWLKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGD-----DKSL-PPLNKLVSLAGPFNVGNLVPDETVTDVL 191 (288)
T ss_pred HHHHHHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcC-----CCCC-cchhheEEecccccccccCCCcchheee
Confidence 577788888888777665699999999999999999885421 2233 34677777766543 111211111
Q ss_pred cc------ch--HH-----HhhhcCCCEEEEccCC------CCcccchhhHHHHHHhhhcCceeeEEEEe--cCCCCccC
Q 025145 177 EG------SH--EA-----ARRAASLPILLTHGLC------DDVVPYKYGEKSANCLSISGFRHLTFKSF--EGLGHYTV 235 (257)
Q Consensus 177 ~~------~~--~~-----~~~~~~~P~l~~~G~~------D~~v~~~~~~~~~~~l~~~~~~~~~~~~~--~g~~H~~~ 235 (257)
.. .+ .. .....++.+|++.|+- |..||...+...+..+...+. ...-.++ +.+.|.-.
T Consensus 192 ~~~~~~~~t~y~~y~~~n~k~v~~~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~k-sy~e~~~~Gk~a~Hs~l 270 (288)
T COG4814 192 KDGPGLIKTPYYDYIAKNYKKVSPNTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGK-SYIESLYKGKDARHSKL 270 (288)
T ss_pred ccCccccCcHHHHHHHhcceeCCCCcEEEEEecccccCCcCCCceechHhHHHHHHhccCcc-eeEEEeeeCCcchhhcc
Confidence 00 00 00 1122356799999984 567777777777777776543 2222234 45778765
Q ss_pred ---HHHHHHHHHHHHH
Q 025145 236 ---PKEMDEVCNWLTA 248 (257)
Q Consensus 236 ---~~~~~~~~~~l~~ 248 (257)
+...+.+..||-+
T Consensus 271 hen~~v~~yv~~FLw~ 286 (288)
T COG4814 271 HENPTVAKYVKNFLWE 286 (288)
T ss_pred CCChhHHHHHHHHhhc
Confidence 3455777777743
No 145
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.88 E-value=5.1e-08 Score=80.93 Aligned_cols=218 Identities=15% Similarity=0.038 Sum_probs=139.5
Q ss_pred ccccCCCCCceEEeCCCC---CCceEEEEEccCCCCcc--chHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccC
Q 025145 14 AARRTFEFGRTHVVRPKG---KHQATIVWLHGLGDNGS--SWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDV 88 (257)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~---~~~~~vi~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~ 88 (257)
.+.++...+-.+++.... ..+|.+|+.+|.-+-.- .|..-...|.+.|+.....+.||- |.....|...
T Consensus 447 ~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGG------Ge~G~~WHk~ 520 (712)
T KOG2237|consen 447 SSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGG------GEYGEQWHKD 520 (712)
T ss_pred ecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccC------cccccchhhc
Confidence 345677778787775442 35677777777433322 244433444468999999998863 3333567654
Q ss_pred CCCCCCCCCchhhHHHHHHHHHHHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCC
Q 025145 89 GELSDDGPEDWEGLDASAAHIANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLP 167 (257)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 167 (257)
+.... -...+++.+.....++++.. .+.+..+.|.|.||.++..+.-+. |+.+.++|+-.|+++
T Consensus 521 G~lak----KqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~r-----------PdLF~avia~VpfmD 585 (712)
T KOG2237|consen 521 GRLAK----KQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQR-----------PDLFGAVIAKVPFMD 585 (712)
T ss_pred cchhh----hcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccC-----------chHhhhhhhcCccee
Confidence 33221 23455666666666676654 346999999999999999998865 889999998888776
Q ss_pred Cchhhhhcccc---------------------chHH-----HhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCc--
Q 025145 168 GSRNLRNKIEG---------------------SHEA-----ARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGF-- 219 (257)
Q Consensus 168 ~~~~~~~~~~~---------------------~~~~-----~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~-- 219 (257)
..+........ .+.. .....-.-+|+..+.+|.-|.+..+.++.++++..-.
T Consensus 586 vL~t~~~tilplt~sd~ee~g~p~~~~~~~~i~~y~pv~~i~~q~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~ 665 (712)
T KOG2237|consen 586 VLNTHKDTILPLTTSDYEEWGNPEDFEDLIKISPYSPVDNIKKQVQYPSMLVTTADHDDRVGPLESLKWVAKLREATCDS 665 (712)
T ss_pred hhhhhccCccccchhhhcccCChhhhhhhheecccCccCCCchhccCcceEEeeccCCCcccccchHHHHHHHHHHhhcc
Confidence 55433322100 0000 0111123489999999988888888888888875421
Q ss_pred ----eeeEEEEecCCCCccC------HHHHHHHHHHHHHhcCc
Q 025145 220 ----RHLTFKSFEGLGHYTV------PKEMDEVCNWLTARLGL 252 (257)
Q Consensus 220 ----~~~~~~~~~g~~H~~~------~~~~~~~~~~l~~~l~~ 252 (257)
+++-+.+..++||..- .+......+||.+.+..
T Consensus 666 ~~q~~pvll~i~~~agH~~~~~~~k~~~E~a~~yaFl~K~~~~ 708 (712)
T KOG2237|consen 666 LKQTNPVLLRIETKAGHGAEKPRFKQIEEAAFRYAFLAKMLNS 708 (712)
T ss_pred hhcCCCEEEEEecCCccccCCchHHHHHHHHHHHHHHHHHhcC
Confidence 2466778889999865 34456677788776654
No 146
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.84 E-value=2e-07 Score=77.97 Aligned_cols=199 Identities=16% Similarity=0.063 Sum_probs=131.6
Q ss_pred ccCCCCCceEEeCCC---CCCceEEEEEccCCCCccc--hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCC
Q 025145 16 RRTFEFGRTHVVRPK---GKHQATIVWLHGLGDNGSS--WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGE 90 (257)
Q Consensus 16 ~~~~~~~~~~~~~~~---~~~~~~vi~~HG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~ 90 (257)
.+++..+..+++... ..+.|++|+-=|.-+.... |....-.|..+|+.....-.||- |.-...||..+.
T Consensus 427 ~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGG------gelG~~WYe~GK 500 (682)
T COG1770 427 DDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGG------GELGRAWYEDGK 500 (682)
T ss_pred CCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecc------cccChHHHHhhh
Confidence 467778888888754 3466788877775444332 44333445578998888876652 344457887654
Q ss_pred CCCCCCCchhhHHHHHHHHHHHhccCCC-CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc
Q 025145 91 LSDDGPEDWEGLDASAAHIANLLSTEPA-DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS 169 (257)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 169 (257)
... -..++.+.++....++++... .++++++|-|.||.+.-..+... |+.++++|+-.||++..
T Consensus 501 ~l~----K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~-----------P~lf~~iiA~VPFVDvl 565 (682)
T COG1770 501 LLN----KKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMA-----------PDLFAGIIAQVPFVDVL 565 (682)
T ss_pred hhh----ccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhC-----------hhhhhheeecCCccchh
Confidence 322 234556666666666666543 45999999999999999999865 89999999999986544
Q ss_pred hhhhhccc------------------------cchHHH-hhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCcee--e
Q 025145 170 RNLRNKIE------------------------GSHEAA-RRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRH--L 222 (257)
Q Consensus 170 ~~~~~~~~------------------------~~~~~~-~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~--~ 222 (257)
..+.+.-. ..+-.+ ....-.|+|++.|..|..|.+-...++..+|++.+... +
T Consensus 566 tTMlD~slPLT~~E~~EWGNP~d~e~y~yikSYSPYdNV~a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td~~pl 645 (682)
T COG1770 566 TTMLDPSLPLTVTEWDEWGNPLDPEYYDYIKSYSPYDNVEAQPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTDGNPL 645 (682)
T ss_pred hhhcCCCCCCCccchhhhCCcCCHHHHHHHhhcCchhccccCCCCceEEEccccCCccccchHHHHHHHHhhcccCCCcE
Confidence 43332110 001111 12345789999999999999999999999999875421 3
Q ss_pred EEEEecCCCCccC
Q 025145 223 TFKSFEGLGHYTV 235 (257)
Q Consensus 223 ~~~~~~g~~H~~~ 235 (257)
=+.+=-++||.-.
T Consensus 646 Llkt~M~aGHgG~ 658 (682)
T COG1770 646 LLKTNMDAGHGGA 658 (682)
T ss_pred EEEecccccCCCC
Confidence 3333245899543
No 147
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=98.84 E-value=3.4e-08 Score=75.34 Aligned_cols=186 Identities=13% Similarity=0.092 Sum_probs=108.5
Q ss_pred CCceEEEEEccCCCCccc-hHHHhh-----cCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025145 32 KHQATIVWLHGLGDNGSS-WSQLLE-----SLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~-~~~~~~-----~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
..+|++|-.|..|-+... |..+.. .+. ..+.++=+|.||+..+... -+......++++.
T Consensus 21 ~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~-~~f~i~Hi~aPGqe~ga~~--------------~p~~y~yPsmd~L 85 (283)
T PF03096_consen 21 GNKPAILTYHDVGLNHKSCFQGFFNFEDMQEIL-QNFCIYHIDAPGQEEGAAT--------------LPEGYQYPSMDQL 85 (283)
T ss_dssp TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHH-TTSEEEEEE-TTTSTT-------------------TT-----HHHH
T ss_pred CCCceEEEeccccccchHHHHHHhcchhHHHHh-hceEEEEEeCCCCCCCccc--------------ccccccccCHHHH
Confidence 368999999999988776 554432 333 6789999999987432211 1112235566777
Q ss_pred HHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch---------------
Q 025145 106 AAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR--------------- 170 (257)
Q Consensus 106 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------------- 170 (257)
++.+.+.++..... .++-+|--.|+++-.++|.. +|+++.++|++++-.....
T Consensus 86 Ae~l~~Vl~~f~lk-~vIg~GvGAGAnIL~rfAl~-----------~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~ 153 (283)
T PF03096_consen 86 AEMLPEVLDHFGLK-SVIGFGVGAGANILARFALK-----------HPERVLGLILVNPTCTAAGWMEWFYQKLSSWLLY 153 (283)
T ss_dssp HCTHHHHHHHHT----EEEEEETHHHHHHHHHHHH-----------SGGGEEEEEEES---S---HHHHHHHHHH-----
T ss_pred HHHHHHHHHhCCcc-EEEEEeeccchhhhhhcccc-----------CccceeEEEEEecCCCCccHHHHHHHHHhccccc
Confidence 77777777765554 89999999999999999995 4999999999976311100
Q ss_pred ------------------------------hhhhcccc-ch-----------------HHHhhhcCCCEEEEccCCCCcc
Q 025145 171 ------------------------------NLRNKIEG-SH-----------------EAARRAASLPILLTHGLCDDVV 202 (257)
Q Consensus 171 ------------------------------~~~~~~~~-~~-----------------~~~~~~~~~P~l~~~G~~D~~v 202 (257)
.+...+.. .. ........+|+|++.|+.-+.
T Consensus 154 ~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~- 232 (283)
T PF03096_consen 154 SYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPH- 232 (283)
T ss_dssp --CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTT-
T ss_pred ccccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcc-
Confidence 00000000 00 001123469999999998877
Q ss_pred cchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHh
Q 025145 203 PYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTAR 249 (257)
Q Consensus 203 ~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~ 249 (257)
.+.+.++..++... +.++..+++.|=.+..|.+..+.+-|.=+
T Consensus 233 -~~~vv~~ns~Ldp~---~ttllkv~dcGglV~eEqP~klaea~~lF 275 (283)
T PF03096_consen 233 -VDDVVEMNSKLDPT---KTTLLKVADCGGLVLEEQPGKLAEAFKLF 275 (283)
T ss_dssp -HHHHHHHHHHS-CC---CEEEEEETT-TT-HHHH-HHHHHHHHHHH
T ss_pred -hhhHHHHHhhcCcc---cceEEEecccCCcccccCcHHHHHHHHHH
Confidence 44577888888654 67999999998888877766655544433
No 148
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=98.78 E-value=1.6e-07 Score=71.63 Aligned_cols=122 Identities=17% Similarity=0.081 Sum_probs=77.3
Q ss_pred hhhHHHHHHHHHHHhccCCC----CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh--h
Q 025145 99 WEGLDASAAHIANLLSTEPA----DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN--L 172 (257)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~----~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~ 172 (257)
..........+.-+++.... .+.-+|.|.|+||.+++..+.+ +|..|..++..||.+...-. .
T Consensus 152 ~~~~~~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~-----------~Pe~FG~V~s~Sps~~~~~~~~~ 220 (299)
T COG2382 152 EAYWRFLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLR-----------HPERFGHVLSQSGSFWWTPLDTQ 220 (299)
T ss_pred HHHHHHHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhc-----------CchhhceeeccCCccccCccccc
Confidence 33445555556666655432 2477999999999999999995 59999999999986542211 1
Q ss_pred hhccccchHHHhhhc---CCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC
Q 025145 173 RNKIEGSHEAARRAA---SLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV 235 (257)
Q Consensus 173 ~~~~~~~~~~~~~~~---~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 235 (257)
.+............+ ..-++...++.+.+.++ .+++++.+...+. +..+..|+| ||...
T Consensus 221 ~~~~~~~~l~~~~a~~~~~~~~l~~g~~~~~~~~p--Nr~L~~~L~~~g~-~~~yre~~G-gHdw~ 282 (299)
T COG2382 221 PQGEVAESLKILHAIGTDERIVLTTGGEEGDFLRP--NRALAAQLEKKGI-PYYYREYPG-GHDWA 282 (299)
T ss_pred cccchhhhhhhhhccCccceEEeecCCccccccch--hHHHHHHHHhcCC-cceeeecCC-CCchh
Confidence 110000001111111 22344444555555444 7889999999988 889999998 99754
No 149
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=98.78 E-value=5e-08 Score=80.51 Aligned_cols=214 Identities=18% Similarity=0.076 Sum_probs=134.9
Q ss_pred cccCCCCCceEEeCC-CCCCceEEEEEccCCCCcc--chHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCC
Q 025145 15 ARRTFEFGRTHVVRP-KGKHQATIVWLHGLGDNGS--SWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGEL 91 (257)
Q Consensus 15 ~~~~~~~~~~~~~~~-~~~~~~~vi~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~ 91 (257)
+.++++++..++... ...+.|++|+--|.-+-+. .|......+-++|...+..+.||- |.-.+.|...+..
T Consensus 401 SkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGG------GEfGp~WH~Aa~k 474 (648)
T COG1505 401 SKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGG------GEFGPEWHQAGMK 474 (648)
T ss_pred cCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccC------CccCHHHHHHHhh
Confidence 346777887777622 1235667665444222221 255544555568888888898863 3333566544221
Q ss_pred CCCCCCchhhHHHHHHHHHHHhccCCC-CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch
Q 025145 92 SDDGPEDWEGLDASAAHIANLLSTEPA-DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR 170 (257)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 170 (257)
......+++.++.+.+++++... ++++++.|-|-||.++-..+.+. |+.+.++++-.|.+++.+
T Consensus 475 ----~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQr-----------PelfgA~v~evPllDMlR 539 (648)
T COG1505 475 ----ENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQR-----------PELFGAAVCEVPLLDMLR 539 (648)
T ss_pred ----hcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccC-----------hhhhCceeeccchhhhhh
Confidence 11234456666667777777543 46999999999999998888854 888888887666543321
Q ss_pred h---------------------hhhccccchHHHh--hhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEe
Q 025145 171 N---------------------LRNKIEGSHEAAR--RAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSF 227 (257)
Q Consensus 171 ~---------------------~~~~~~~~~~~~~--~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~ 227 (257)
. ........+..+. ...-.|+||..+..|.-|.+.++++++.+|++.+. ++-+.+-
T Consensus 540 Yh~l~aG~sW~~EYG~Pd~P~d~~~l~~YSPy~nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~~~-pv~~~e~ 618 (648)
T COG1505 540 YHLLTAGSSWIAEYGNPDDPEDRAFLLAYSPYHNLKPGQKYPPTLITTSLHDDRVHPAHARKFAAKLQEVGA-PVLLREE 618 (648)
T ss_pred hcccccchhhHhhcCCCCCHHHHHHHHhcCchhcCCccccCCCeEEEcccccccccchHHHHHHHHHHhcCC-ceEEEee
Confidence 0 0000011111112 23347899999999999999999999999999986 5555555
Q ss_pred cCCCCccC------HHHHHHHHHHHHHhc
Q 025145 228 EGLGHYTV------PKEMDEVCNWLTARL 250 (257)
Q Consensus 228 ~g~~H~~~------~~~~~~~~~~l~~~l 250 (257)
-++||.-- .+....+..||.+.|
T Consensus 619 t~gGH~g~~~~~~~A~~~a~~~afl~r~L 647 (648)
T COG1505 619 TKGGHGGAAPTAEIARELADLLAFLLRTL 647 (648)
T ss_pred cCCcccCCCChHHHHHHHHHHHHHHHHhh
Confidence 56799764 223456777777765
No 150
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.75 E-value=1.3e-07 Score=75.25 Aligned_cols=64 Identities=17% Similarity=0.161 Sum_probs=46.5
Q ss_pred HhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC---------HHHH----HHHHHHHHHh
Q 025145 183 ARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV---------PKEM----DEVCNWLTAR 249 (257)
Q Consensus 183 ~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~---------~~~~----~~~~~~l~~~ 249 (257)
....+++|++++.|++|.++|.+.+....+.+.. +++++..+ .||.-. .+.+ .+..+|+.+.
T Consensus 325 dL~~It~pvy~~a~~~DhI~P~~Sv~~g~~l~~g----~~~f~l~~-sGHIa~vVN~p~~~k~~~w~n~~~~~~~Wl~~a 399 (445)
T COG3243 325 DLGDITCPVYNLAAEEDHIAPWSSVYLGARLLGG----EVTFVLSR-SGHIAGVVNPPGNAKYQYWTNLPADAEAWLSGA 399 (445)
T ss_pred chhhcccceEEEeecccccCCHHHHHHHHHhcCC----ceEEEEec-CceEEEEeCCcchhhhhcCCCCcchHHHHHHhh
Confidence 3466899999999999999999888877777763 57888877 599432 1122 3777788764
Q ss_pred cC
Q 025145 250 LG 251 (257)
Q Consensus 250 l~ 251 (257)
-.
T Consensus 400 ~~ 401 (445)
T COG3243 400 KE 401 (445)
T ss_pred cc
Confidence 43
No 151
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.75 E-value=3.9e-07 Score=69.05 Aligned_cols=147 Identities=18% Similarity=0.149 Sum_probs=85.0
Q ss_pred CCceEEEEEccCCCCccch----HHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHH
Q 025145 32 KHQATIVWLHGLGDNGSSW----SQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAA 107 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~----~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 107 (257)
+.+.++||+||+..+...- ..+...+...+ .++.+.+|..|. ...+ ..+.........
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~-~~i~FsWPS~g~-------~~~Y----------~~d~~~a~~s~~ 77 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPG-VVILFSWPSDGS-------LLGY----------FYDRESARFSGP 77 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCc-eEEEEEcCCCCC-------hhhh----------hhhhhhHHHHHH
Confidence 4567999999998876542 22334443334 788888874321 0010 011122223333
Q ss_pred HHHHHhcc---CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHHh
Q 025145 108 HIANLLST---EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAAR 184 (257)
Q Consensus 108 ~~~~~~~~---~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 184 (257)
.+.+++.. .....+|.|++||||+.+.+..+......... .....++..+++.+|-++... +..... ..
T Consensus 78 ~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~--~~~~~~~~~viL~ApDid~d~-f~~~~~-----~~ 149 (233)
T PF05990_consen 78 ALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGER--PDVKARFDNVILAAPDIDNDV-FRSQLP-----DL 149 (233)
T ss_pred HHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccc--hhhHhhhheEEEECCCCCHHH-HHHHHH-----HH
Confidence 34444433 22335999999999999999988754221100 012347888898887666532 222221 22
Q ss_pred hhcCCCEEEEccCCCCcccc
Q 025145 185 RAASLPILLTHGLCDDVVPY 204 (257)
Q Consensus 185 ~~~~~P~l~~~G~~D~~v~~ 204 (257)
.....++.+.+..+|.....
T Consensus 150 ~~~~~~itvy~s~~D~AL~~ 169 (233)
T PF05990_consen 150 GSSARRITVYYSRNDRALKA 169 (233)
T ss_pred hhcCCCEEEEEcCCchHHHH
Confidence 33458999999999987654
No 152
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.73 E-value=4.3e-07 Score=72.50 Aligned_cols=40 Identities=23% Similarity=0.282 Sum_probs=35.7
Q ss_pred cCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEe
Q 025145 187 ASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSF 227 (257)
Q Consensus 187 ~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~ 227 (257)
.++-.+..|+..|..+|.+.-.++++.+++.|. +++++.+
T Consensus 292 ~~~~yvsYHs~~D~~~p~~~K~~l~~~l~~lgf-da~l~lI 331 (403)
T PF11144_consen 292 KKIIYVSYHSIKDDLAPAEDKEELYEILKNLGF-DATLHLI 331 (403)
T ss_pred cceEEEEEeccCCCCCCHHHHHHHHHHHHHcCC-CeEEEEe
Confidence 345577889999999999999999999999998 8888888
No 153
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.64 E-value=2.7e-08 Score=78.99 Aligned_cols=113 Identities=19% Similarity=0.240 Sum_probs=61.9
Q ss_pred CCceEEEEEccCCCCc--cchHH-Hhh-cCCC--CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025145 32 KHQATIVWLHGLGDNG--SSWSQ-LLE-SLPL--PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~--~~~~~-~~~-~l~~--~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
..+|++|++|||.++. ..|.. +.+ .+.. .++.|+++|+.. +. ...|.. .......+...
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~-------~a--~~~Y~~------a~~n~~~vg~~ 133 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSR-------GA--SNNYPQ------AVANTRLVGRQ 133 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HH-------HH--SS-HHH------HHHHHHHHHHH
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchh-------hc--cccccc------hhhhHHHHHHH
Confidence 4679999999999888 34543 444 3444 589999999431 00 000000 00011222333
Q ss_pred HHHHHHHhc-c-CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCccc--ccceEEEeccCCCCch
Q 025145 106 AAHIANLLS-T-EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYV--NLRAVVGLSGWLPGSR 170 (257)
Q Consensus 106 ~~~~~~~~~-~-~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~ 170 (257)
+..+...|. . ....+++.|+|||+||++|-.+..+. .. ++..+..+.|.-|..+
T Consensus 134 la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~-----------~~~~ki~rItgLDPAgP~F~ 191 (331)
T PF00151_consen 134 LAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYL-----------KGGGKIGRITGLDPAGPLFE 191 (331)
T ss_dssp HHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHT-----------TT---SSEEEEES-B-TTTT
T ss_pred HHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhc-----------cCcceeeEEEecCccccccc
Confidence 333333332 2 23446999999999999999999864 44 7999999988766544
No 154
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=98.64 E-value=3.6e-06 Score=63.91 Aligned_cols=180 Identities=15% Similarity=0.094 Sum_probs=114.3
Q ss_pred CceEEEEEccCCCCccc-hHHHh-----hcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHH
Q 025145 33 HQATIVWLHGLGDNGSS-WSQLL-----ESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASA 106 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~-~~~~~-----~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 106 (257)
++|++|-.|..|-+... |..+. ..+..+ +.++-+|.|||-.+... + +..-...++++.+
T Consensus 45 ~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~-------~-------p~~y~yPsmd~LA 109 (326)
T KOG2931|consen 45 NKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPS-------F-------PEGYPYPSMDDLA 109 (326)
T ss_pred CCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCcc-------C-------CCCCCCCCHHHHH
Confidence 57889999999987765 54432 333334 99999999987433110 0 1111245667777
Q ss_pred HHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch----------------
Q 025145 107 AHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR---------------- 170 (257)
Q Consensus 107 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---------------- 170 (257)
+.+...++...-. .++-+|--.|+++-.++|..+ |+++.++|++++-.....
T Consensus 110 d~l~~VL~~f~lk-~vIg~GvGAGAyIL~rFAl~h-----------p~rV~GLvLIn~~~~a~gwiew~~~K~~s~~l~~ 177 (326)
T KOG2931|consen 110 DMLPEVLDHFGLK-SVIGMGVGAGAYILARFALNH-----------PERVLGLVLINCDPCAKGWIEWAYNKVSSNLLYY 177 (326)
T ss_pred HHHHHHHHhcCcc-eEEEecccccHHHHHHHHhcC-----------hhheeEEEEEecCCCCchHHHHHHHHHHHHHHHh
Confidence 7777777765544 888999999999999999954 999999999865211000
Q ss_pred -------------------------hhhhcc----c-----------------cch-HHHhh----hcCCCEEEEccCCC
Q 025145 171 -------------------------NLRNKI----E-----------------GSH-EAARR----AASLPILLTHGLCD 199 (257)
Q Consensus 171 -------------------------~~~~~~----~-----------------~~~-~~~~~----~~~~P~l~~~G~~D 199 (257)
.+.+.+ . +.. ..... ..++|+|++.|+.-
T Consensus 178 ~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vllvvGd~S 257 (326)
T KOG2931|consen 178 YGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVLLVVGDNS 257 (326)
T ss_pred hchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEEEEecCCC
Confidence 000000 0 000 00001 23599999999988
Q ss_pred CcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHH
Q 025145 200 DVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCN 244 (257)
Q Consensus 200 ~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~ 244 (257)
+.+ +.+..+..++... +.++..+.+.|=.+..+.+..+.+
T Consensus 258 p~~--~~vv~~n~~Ldp~---~ttllk~~d~g~l~~e~qP~kl~e 297 (326)
T KOG2931|consen 258 PHV--SAVVECNSKLDPT---YTTLLKMADCGGLVQEEQPGKLAE 297 (326)
T ss_pred chh--hhhhhhhcccCcc---cceEEEEcccCCcccccCchHHHH
Confidence 764 3466677777654 678888888887776544444333
No 155
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.60 E-value=1.2e-05 Score=67.24 Aligned_cols=65 Identities=12% Similarity=0.124 Sum_probs=50.3
Q ss_pred CCCEEEEccCCCCcccchhhHHHHHHhhhc---------------------Cc----e-----eeEEEEecCCCCccCHH
Q 025145 188 SLPILLTHGLCDDVVPYKYGEKSANCLSIS---------------------GF----R-----HLTFKSFEGLGHYTVPK 237 (257)
Q Consensus 188 ~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~---------------------~~----~-----~~~~~~~~g~~H~~~~~ 237 (257)
.++||+.+|+.|-+|+.-..+.+.+.++-. |. . +.+++.+.++||++..+
T Consensus 364 gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~d 443 (462)
T PTZ00472 364 GVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPMD 443 (462)
T ss_pred CceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccChhh
Confidence 589999999999999998887777776511 11 2 46778888999999988
Q ss_pred HHHHHHHHHHHhcCc
Q 025145 238 EMDEVCNWLTARLGL 252 (257)
Q Consensus 238 ~~~~~~~~l~~~l~~ 252 (257)
.++.+.+.+.+++..
T Consensus 444 ~P~~~~~~i~~fl~~ 458 (462)
T PTZ00472 444 QPAVALTMINRFLRN 458 (462)
T ss_pred HHHHHHHHHHHHHcC
Confidence 887777777776653
No 156
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.56 E-value=1.5e-07 Score=76.53 Aligned_cols=120 Identities=17% Similarity=0.113 Sum_probs=76.5
Q ss_pred CCCCceEEEEEccCC---CCccchHHHhhcCCCCc-eEEEccCCCCCCcccCCCCcccccccCCCCC--CC--CCCchhh
Q 025145 30 KGKHQATIVWLHGLG---DNGSSWSQLLESLPLPN-IKWICPTAPTRPVAILGGFPCTAWFDVGELS--DD--GPEDWEG 101 (257)
Q Consensus 30 ~~~~~~~vi~~HG~~---~~~~~~~~~~~~l~~~g-~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~--~~--~~~~~~~ 101 (257)
..++.|++||+||.+ ++......-...|++.| +.||.+++|.--++. .+..... +. ......+
T Consensus 90 ~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGf---------L~~~~~~~~~~~~~n~Gl~D 160 (491)
T COG2272 90 PAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGF---------LDLSSLDTEDAFASNLGLLD 160 (491)
T ss_pred CCCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCccccccee---------eehhhccccccccccccHHH
Confidence 345679999999965 33333222234555566 999999988533322 2221111 11 1134556
Q ss_pred HHHHHHHHHHHhccCCC-CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCC
Q 025145 102 LDASAAHIANLLSTEPA-DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLP 167 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~~-~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 167 (257)
....++++.+.|..... +++|.|+|+|.|++.++.+++.. .....+..+|+.||...
T Consensus 161 qilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P---------~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 161 QILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVP---------SAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCc---------cchHHHHHHHHhCCCCC
Confidence 66677778888877644 46999999999999999998742 33455677777777654
No 157
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.51 E-value=3.9e-07 Score=71.77 Aligned_cols=64 Identities=28% Similarity=0.449 Sum_probs=51.4
Q ss_pred hhhcC-CCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC----H---HHHHHHHHHHHHhc
Q 025145 184 RRAAS-LPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV----P---KEMDEVCNWLTARL 250 (257)
Q Consensus 184 ~~~~~-~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~----~---~~~~~~~~~l~~~l 250 (257)
...+. .|++++||.+|..||...+..+++..+.. +.+...+++++|... . +.+..+.+|+.+.+
T Consensus 227 ~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~---~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 227 AEKISPRPVLLVHGERDEVVPLRDAEDLYEAARER---PKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred HhhcCCcceEEEecCCCcccchhhhHHHHhhhccC---CceEEEecCCccccccCccHHHHHHHHHHHHHHHHhc
Confidence 33444 79999999999999999999999999864 357788888899866 2 46788888888765
No 158
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.50 E-value=3.1e-07 Score=69.00 Aligned_cols=87 Identities=21% Similarity=0.338 Sum_probs=50.6
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCC--ce---EEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhH----
Q 025145 32 KHQATIVWLHGLGDNGSSWSQLLESLPLP--NI---KWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGL---- 102 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~--g~---~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~---- 102 (257)
++...|||+||+.++..+|..+...+... .+ .++..- + .........++
T Consensus 2 ~~~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~-----------------~-----~~n~~~T~~gI~~~g 59 (217)
T PF05057_consen 2 KPVHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLG-----------------Y-----SNNEFKTFDGIDVCG 59 (217)
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhc-----------------c-----cccccccchhhHHHH
Confidence 45669999999999999988766665421 11 111110 0 00011112223
Q ss_pred HHHHHHHHHHhccCCCC-ceEEEEEechhHHHHHHHHHh
Q 025145 103 DASAAHIANLLSTEPAD-VKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~~-~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
...++.+.+.++..... .+|.++||||||.++-.++..
T Consensus 60 ~rL~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~~ 98 (217)
T PF05057_consen 60 ERLAEEILEHIKDYESKIRKISFIGHSLGGLIARYALGL 98 (217)
T ss_pred HHHHHHHHHhccccccccccceEEEecccHHHHHHHHHH
Confidence 33444555555443332 489999999999999777664
No 159
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.50 E-value=1.6e-06 Score=73.60 Aligned_cols=116 Identities=18% Similarity=0.146 Sum_probs=70.1
Q ss_pred CCCceEEEEEccCCC---Cccc--hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025145 31 GKHQATIVWLHGLGD---NGSS--WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~---~~~~--~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
+++.|+||++||.+- +... ...++.... ++.|+.+++|.-..+... .............+....
T Consensus 92 ~~~~pv~v~ihGG~~~~g~~~~~~~~~~~~~~~--~~~vv~~~yRlg~~g~~~---------~~~~~~~~n~g~~D~~~a 160 (493)
T cd00312 92 GNSLPVMVWIHGGGFMFGSGSLYPGDGLAREGD--NVIVVSINYRLGVLGFLS---------TGDIELPGNYGLKDQRLA 160 (493)
T ss_pred CCCCCEEEEEcCCccccCCCCCCChHHHHhcCC--CEEEEEeccccccccccc---------CCCCCCCcchhHHHHHHH
Confidence 356799999999542 2222 223333221 599999998742222111 011111122234556666
Q ss_pred HHHHHHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCC
Q 025145 106 AAHIANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWL 166 (257)
Q Consensus 106 ~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 166 (257)
++++.+.+... .+.++|.|+|+|.||..+..++... ..+..+.++|+.||..
T Consensus 161 l~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~---------~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 161 LKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSP---------DSKGLFHRAISQSGSA 213 (493)
T ss_pred HHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCc---------chhHHHHHHhhhcCCc
Confidence 77777777664 3456999999999999999888742 2245677888777643
No 160
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.48 E-value=4.4e-08 Score=72.80 Aligned_cols=87 Identities=24% Similarity=0.260 Sum_probs=47.4
Q ss_pred eEEEEEccCCC-CccchHHHhhcCCCCceE---EEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHH
Q 025145 35 ATIVWLHGLGD-NGSSWSQLLESLPLPNIK---WICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIA 110 (257)
Q Consensus 35 ~~vi~~HG~~~-~~~~~~~~~~~l~~~g~~---v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (257)
.+|||+||.++ ....|..+.+.|.++||. ++++++-..... . .........+.+..+.
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~--------~----------~~~~~~~~~~~~~~l~ 63 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGS--------P----------SVQNAHMSCESAKQLR 63 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHH--------T----------HHHHHHB-HHHHHHHH
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCC--------C----------cccccccchhhHHHHH
Confidence 37999999998 567899999999989998 788874311000 0 0000000112223333
Q ss_pred HHhc---cCCCCceEEEEEechhHHHHHHHHHh
Q 025145 111 NLLS---TEPADVKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 111 ~~~~---~~~~~~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
.+++ ..... +|-|+||||||.++-.+...
T Consensus 64 ~fI~~Vl~~TGa-kVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 64 AFIDAVLAYTGA-KVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp HHHHHHHHHHT---EEEEEETCHHHHHHHHHHH
T ss_pred HHHHHHHHhhCC-EEEEEEcCCcCHHHHHHHHH
Confidence 3332 23445 99999999999999988864
No 161
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.48 E-value=1.1e-06 Score=66.87 Aligned_cols=104 Identities=20% Similarity=0.200 Sum_probs=75.1
Q ss_pred eEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhc
Q 025145 35 ATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLS 114 (257)
Q Consensus 35 ~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (257)
|+|+++|+.++....|..++..|. ....++..+.|+-+. ......+++++++...+.|.
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~-~~~~v~~l~a~g~~~--------------------~~~~~~~l~~~a~~yv~~Ir 59 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALG-PLLPVYGLQAPGYGA--------------------GEQPFASLDDMAAAYVAAIR 59 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhc-cCceeeccccCcccc--------------------cccccCCHHHHHHHHHHHHH
Confidence 579999999999999999999997 458888888774210 11224456677777777776
Q ss_pred cCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCC
Q 025145 115 TEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLP 167 (257)
Q Consensus 115 ~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 167 (257)
+..+..++.|+|+|+||.+|..+|.+.... -..++.++.+..+.+
T Consensus 60 ~~QP~GPy~L~G~S~GG~vA~evA~qL~~~--------G~~Va~L~llD~~~~ 104 (257)
T COG3319 60 RVQPEGPYVLLGWSLGGAVAFEVAAQLEAQ--------GEEVAFLGLLDAVPP 104 (257)
T ss_pred HhCCCCCEEEEeeccccHHHHHHHHHHHhC--------CCeEEEEEEeccCCC
Confidence 666666999999999999999999875211 234566666655444
No 162
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.40 E-value=4.2e-06 Score=62.38 Aligned_cols=175 Identities=15% Similarity=0.087 Sum_probs=93.3
Q ss_pred EEccCC--CCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhccC
Q 025145 39 WLHGLG--DNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTE 116 (257)
Q Consensus 39 ~~HG~~--~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (257)
++|..+ ++...|..+...+. ..+.++.++.++++.+. ... ..+...+..+...+...
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~-~~~~v~~~~~~g~~~~~-----------------~~~---~~~~~~~~~~~~~l~~~ 60 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALR-GRRDVSALPLPGFGPGE-----------------PLP---ASADALVEAQAEAVLRA 60 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcC-CCccEEEecCCCCCCCC-----------------CCC---CCHHHHHHHHHHHHHHh
Confidence 344544 56667889999997 57899999988643110 011 12233333333333332
Q ss_pred CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh-------hhh----------cccc-
Q 025145 117 PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN-------LRN----------KIEG- 178 (257)
Q Consensus 117 ~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-------~~~----------~~~~- 178 (257)
....++.++|||+||.++..++.+... ....+.+++.+....+.... +.. ....
T Consensus 61 ~~~~~~~l~g~s~Gg~~a~~~a~~l~~--------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (212)
T smart00824 61 AGGRPFVLVGHSSGGLLAHAVAARLEA--------RGIPPAAVVLLDTYPPGDPAPEGWLPELLRGVFEREDSFVPMDDA 132 (212)
T ss_pred cCCCCeEEEEECHHHHHHHHHHHHHHh--------CCCCCcEEEEEccCCCCCccchhhHHHHHHHHHhhhcccccccch
Confidence 223489999999999999998885321 12346666655443322110 000 0000
Q ss_pred ----ch-------HHHhhhcCCCEEEEccCCCCcc-cchhhHHHHHHhhhcCceeeEEEEecCCCCccC-HHHHHHHHHH
Q 025145 179 ----SH-------EAARRAASLPILLTHGLCDDVV-PYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV-PKEMDEVCNW 245 (257)
Q Consensus 179 ----~~-------~~~~~~~~~P~l~~~G~~D~~v-~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~~ 245 (257)
.. .........|+.++.+++|... +.+....+.+... ...+.+.++| +|... .+....+.+-
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~----~~~~~~~~~g-~H~~~~~~~~~~~~~~ 207 (212)
T smart00824 133 RLTAMGAYLRLFGGWTPGPVAAPTLLVRASEPLAEWPDEDPDGWRAHWP----LPHTVVDVPG-DHFTMMEEHAAATARA 207 (212)
T ss_pred hhhHHHHHHHHhccCCCCCCCCCEEEEeccCCCCCCCCCCcccccCCCC----CCceeEEccC-chHHHHHHhHHHHHHH
Confidence 00 0012235679999999988654 2222222222211 1578889996 88765 3444444444
Q ss_pred HH
Q 025145 246 LT 247 (257)
Q Consensus 246 l~ 247 (257)
+.
T Consensus 208 ~~ 209 (212)
T smart00824 208 VH 209 (212)
T ss_pred HH
Confidence 43
No 163
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.39 E-value=1.1e-05 Score=61.86 Aligned_cols=186 Identities=17% Similarity=0.156 Sum_probs=109.5
Q ss_pred EEEEccCC-CCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhcc
Q 025145 37 IVWLHGLG-DNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLST 115 (257)
Q Consensus 37 vi~~HG~~-~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (257)
+|++=||. ..........+...+.|+.++.+-.+.. ..+. ....+...++.+.+.+.+
T Consensus 2 lvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~-----------~~~~----------~~~~~~~~~~~l~~~l~~ 60 (240)
T PF05705_consen 2 LVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPA-----------DFFW----------PSKRLAPAADKLLELLSD 60 (240)
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHH-----------HHee----------eccchHHHHHHHHHHhhh
Confidence 34444554 4444455555555558999998875421 0000 013445556666666665
Q ss_pred CCCC--ceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCC---------------CCchh-----hh
Q 025145 116 EPAD--VKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWL---------------PGSRN-----LR 173 (257)
Q Consensus 116 ~~~~--~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---------------~~~~~-----~~ 173 (257)
.... .++.+-.+|.||...+..+...-..... .....++++++|.=|.+- +.... ..
T Consensus 61 ~~~~~~~~il~H~FSnGG~~~~~~l~~~~~~~~~-~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (240)
T PF05705_consen 61 SQSASPPPILFHSFSNGGSFLYSQLLEAYQSRKK-FGKLLPRIKGIIFDSCPGIPTYSSSARAFSAALPKSSPRWFVPLW 139 (240)
T ss_pred hccCCCCCEEEEEEECchHHHHHHHHHHHHhccc-ccccccccceeEEeCCCCccccccHHHHHHHHcCccchhhHHHHH
Confidence 4333 2899999999888877776521110000 011234477777555431 11100 00
Q ss_pred hc----c------------cc--------chHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecC
Q 025145 174 NK----I------------EG--------SHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEG 229 (257)
Q Consensus 174 ~~----~------------~~--------~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g 229 (257)
.. + .. ..........+|-++++++.|.+++.+..++..+..++.|. +++...+++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~-~V~~~~f~~ 218 (240)
T PF05705_consen 140 PLLQFLLRLSIISYFIFGYPDVQEYYRRALNDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGW-DVRAEKFED 218 (240)
T ss_pred HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCC-eEEEecCCC
Confidence 00 0 00 00012233468999999999999999999999999999988 799999999
Q ss_pred CCCccC-----HHHHHHHHHH
Q 025145 230 LGHYTV-----PKEMDEVCNW 245 (257)
Q Consensus 230 ~~H~~~-----~~~~~~~~~~ 245 (257)
..|-.+ .+.++.+.+|
T Consensus 219 S~HV~H~r~~p~~Y~~~v~~f 239 (240)
T PF05705_consen 219 SPHVAHLRKHPDRYWRAVDEF 239 (240)
T ss_pred CchhhhcccCHHHHHHHHHhh
Confidence 999765 3345556555
No 164
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.39 E-value=2.6e-05 Score=59.03 Aligned_cols=127 Identities=17% Similarity=0.118 Sum_probs=73.4
Q ss_pred HHHHHHHHhccC--CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhh-ccccchH
Q 025145 105 SAAHIANLLSTE--PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRN-KIEGSHE 181 (257)
Q Consensus 105 ~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~ 181 (257)
..+.+.-++++. .+.++..++|||+||.+++..+. .+|+.+...+++||-+...+...- ......
T Consensus 120 L~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL-----------~~p~~F~~y~~~SPSlWw~n~~~l~~~~~~~- 187 (264)
T COG2819 120 LTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALL-----------TYPDCFGRYGLISPSLWWHNEAILREIESLK- 187 (264)
T ss_pred HHHhhHHHHhcccccCcccceeeeecchhHHHHHHHh-----------cCcchhceeeeecchhhhCCHHHhccccccc-
Confidence 344455555553 23357999999999999999998 458999999999985543332221 111111
Q ss_pred HHhhhcCCCEEEEccCC--CC---cccch---hhHHHHHHhhh-cCceeeEEEEecCCCCccC-HHHHHHHHHHHH
Q 025145 182 AARRAASLPILLTHGLC--DD---VVPYK---YGEKSANCLSI-SGFRHLTFKSFEGLGHYTV-PKEMDEVCNWLT 247 (257)
Q Consensus 182 ~~~~~~~~P~l~~~G~~--D~---~v~~~---~~~~~~~~l~~-~~~~~~~~~~~~g~~H~~~-~~~~~~~~~~l~ 247 (257)
... ..++.+.-|.. |. ....+ .+.+..+.+.. .+. .+.+..+++.+|.-. ...+...+.|+.
T Consensus 188 --~~~-~~~i~l~iG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~f~~~~~~~H~~~~~~~~~~al~~l~ 259 (264)
T COG2819 188 --LLK-TKRICLYIGSGELDSSRSIRMAENKQEAAELSSLLEKRTGA-RLVFQEEPLEHHGSVIHASLPSALRFLD 259 (264)
T ss_pred --cCC-CcceEEEecccccCcchhhhhhhHHHHHHHHHHHHhhccCC-ceEecccccccccchHHHHHHHHHHhhh
Confidence 111 44555554443 33 22222 23334444444 444 678888898788654 444556666654
No 165
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=98.37 E-value=9.1e-06 Score=64.45 Aligned_cols=185 Identities=13% Similarity=0.109 Sum_probs=104.5
Q ss_pred CCCceEEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCch
Q 025145 20 EFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDW 99 (257)
Q Consensus 20 ~~~~~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~ 99 (257)
.++..-+....++..-.-||+.|=|+..+.-+.+.+.|.++|+.|+.+|... .-| .....
T Consensus 246 aLPV~e~~a~~~~sd~~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLR-----------YfW---------~~rtP 305 (456)
T COG3946 246 ALPVVEVPAKPGNSDTVAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLR-----------YFW---------SERTP 305 (456)
T ss_pred CCCceeeccCCCCcceEEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhh-----------hhh---------ccCCH
Confidence 3343333333334455778888888887777889999999999999999431 122 12335
Q ss_pred hhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCC-----CCCcccccceEEEeccCCCCchhhhh
Q 025145 100 EGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGN-----GIPYYVNLRAVVGLSGWLPGSRNLRN 174 (257)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~~ 174 (257)
+.+..+...+.++........++.|+|+|+|+=+--....+.+...-.. -.........-+.+.+|+.....-.
T Consensus 306 e~~a~Dl~r~i~~y~~~w~~~~~~liGySfGADvlP~~~n~L~~~~r~~v~~~~ll~l~~~~~fe~~v~gWlg~~~~g~- 384 (456)
T COG3946 306 EQIAADLSRLIRFYARRWGAKRVLLIGYSFGADVLPFAYNRLPPATRQRVRMVSLLGLGRTADFEISVEGWLGMAGEGA- 384 (456)
T ss_pred HHHHHHHHHHHHHHHHhhCcceEEEEeecccchhhHHHHHhCCHHHHHHHHHHHHHhccccceEEEEEeeeeccCCcCC-
Confidence 5666666666666666555569999999999987766655432100000 0000111222234455554332211
Q ss_pred ccccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHH
Q 025145 175 KIEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKE 238 (257)
Q Consensus 175 ~~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~ 238 (257)
........+.....+.+|+|.+|+-.. +-.++.. ..+.+.+|| ||.|..+.
T Consensus 385 --~~~~~~~~~l~~~~v~CiYG~~e~d~~-------Cp~l~~~---~~~~v~lpG-gHHFd~dy 435 (456)
T COG3946 385 --GDVVPDIAKLPLARVQCIYGQEEKDTA-------CPSLKAK---GVDTVKLPG-GHHFDGDY 435 (456)
T ss_pred --CCcchhhhhCCcceeEEEecCcccccc-------CCcchhh---cceeEecCC-CcccCccH
Confidence 001111223345679999998765322 1122232 568899997 77776544
No 166
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.35 E-value=8.9e-06 Score=65.13 Aligned_cols=212 Identities=13% Similarity=0.113 Sum_probs=127.9
Q ss_pred EEeCCC-CCCceEEEEEccCCCC------ccchHHHhhcCC--CCceEEEccCCCCCCcccCC-CCcc-------ccccc
Q 025145 25 HVVRPK-GKHQATIVWLHGLGDN------GSSWSQLLESLP--LPNIKWICPTAPTRPVAILG-GFPC-------TAWFD 87 (257)
Q Consensus 25 ~~~~~~-~~~~~~vi~~HG~~~~------~~~~~~~~~~l~--~~g~~v~~~d~~~~g~~~~~-g~~~-------~~w~~ 87 (257)
++++.. ..+...+|++.|.... .......+..++ ..-..++..+-|.++....+ +... ..|-.
T Consensus 54 I~vP~~~~~~~~all~i~gG~~~~~~~~~~~~~~~~~~~~A~~t~siv~~l~qvPNQpl~f~~d~~~r~ED~iIAytW~~ 133 (367)
T PF10142_consen 54 IYVPKNDKNPDTALLFITGGSNRNWPGPPPDFDDELLQMIARATGSIVAILYQVPNQPLTFDNDPKPRTEDAIIAYTWRK 133 (367)
T ss_pred EEECCCCCCCceEEEEEECCcccCCCCCCCcchHHHHHHHHHhcCCEEEEeCcCCCCCeEeCCCCccccHHHHHHHHHHH
Confidence 444444 5667799999986511 111223334333 23445555567766654322 1111 12322
Q ss_pred CCC-CCCCCCCch---hhHHHHHHHHHHHhccC--CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEE
Q 025145 88 VGE-LSDDGPEDW---EGLDASAAHIANLLSTE--PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVG 161 (257)
Q Consensus 88 ~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~ 161 (257)
+-. ....-+... ......++.+.+++++. ..-++++|.|.|==|+.++..++. ++||.+++-
T Consensus 134 fl~~~d~~w~l~~PMtka~vrAMD~vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa~------------D~RV~aivP 201 (367)
T PF10142_consen 134 FLETGDPEWPLHLPMTKAAVRAMDAVQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAAV------------DPRVKAIVP 201 (367)
T ss_pred HhccCCccchhhhhHHHHHHHHHHHHHHHHHhhcCCCccEEEEeCCchHhHHHHHhhcc------------CcceeEEee
Confidence 211 111111112 23444556666676654 123599999999999999999984 688888875
Q ss_pred ecc-CCCCchhhhhcc-----------------------c----------cchHHHhhhcCCCEEEEccCCCCcccchhh
Q 025145 162 LSG-WLPGSRNLRNKI-----------------------E----------GSHEAARRAASLPILLTHGLCDDVVPYKYG 207 (257)
Q Consensus 162 ~~~-~~~~~~~~~~~~-----------------------~----------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~ 207 (257)
+.- .+.....+...+ . ..+.......+.|-+++.|..|++..++..
T Consensus 202 ~Vid~LN~~~~l~h~y~~yG~~ws~a~~dY~~~gi~~~l~tp~f~~L~~ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~ 281 (367)
T PF10142_consen 202 IVIDVLNMKANLEHQYRSYGGNWSFAFQDYYNEGITQQLDTPEFDKLMQIVDPYSYRDRLTMPKYIINATGDEFFVPDSS 281 (367)
T ss_pred EEEccCCcHHHHHHHHHHhCCCCccchhhhhHhCchhhcCCHHHHHHHHhcCHHHHHHhcCccEEEEecCCCceeccCch
Confidence 431 111111111100 0 011223345699999999999999999999
Q ss_pred HHHHHHhhhcCceeeEEEEecCCCCccC-HHHHHHHHHHHHHhcCc
Q 025145 208 EKSANCLSISGFRHLTFKSFEGLGHYTV-PKEMDEVCNWLTARLGL 252 (257)
Q Consensus 208 ~~~~~~l~~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~~l~~~l~~ 252 (257)
.-+++.|+. +..+..+|+++|... .+..+.+..|+...+..
T Consensus 282 ~~y~d~L~G----~K~lr~vPN~~H~~~~~~~~~~l~~f~~~~~~~ 323 (367)
T PF10142_consen 282 NFYYDKLPG----EKYLRYVPNAGHSLIGSDVVQSLRAFYNRIQNG 323 (367)
T ss_pred HHHHhhCCC----CeeEEeCCCCCcccchHHHHHHHHHHHHHHHcC
Confidence 999999995 568999999999987 55678888898886554
No 167
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.32 E-value=2.1e-06 Score=73.64 Aligned_cols=115 Identities=14% Similarity=0.056 Sum_probs=67.9
Q ss_pred CceEEEEEccCCCCcc----chHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCC-CCCchhhHHHHHH
Q 025145 33 HQATIVWLHGLGDNGS----SWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDD-GPEDWEGLDASAA 107 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~----~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~-~~~~~~~~~~~~~ 107 (257)
+.|++||+||.+-... ....-...++..+..||.+++|.-.++. ......... ......+...+++
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gf---------l~~~~~~~~~gN~Gl~Dq~~AL~ 194 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGF---------LSLGDLDAPSGNYGLLDQRLALK 194 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH----------BSSSTTSHBSTHHHHHHHHHHH
T ss_pred ccceEEEeecccccCCCcccccccccccccCCCEEEEEeccccccccc---------ccccccccCchhhhhhhhHHHHH
Confidence 5799999999553221 1122222334579999999987532221 211111111 2333456666777
Q ss_pred HHHHHhccCCC-CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccC
Q 025145 108 HIANLLSTEPA-DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGW 165 (257)
Q Consensus 108 ~~~~~~~~~~~-~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 165 (257)
++.+.|..... +++|.|+|+|.||..+..++... .....+.++|+.||.
T Consensus 195 WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp---------~~~~LF~raI~~SGs 244 (535)
T PF00135_consen 195 WVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSP---------SSKGLFHRAILQSGS 244 (535)
T ss_dssp HHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGG---------GGTTSBSEEEEES--
T ss_pred HHHhhhhhcccCCcceeeeeecccccccceeeecc---------ccccccccccccccc
Confidence 88888887654 46999999999999999888752 225679999999883
No 168
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.28 E-value=0.00011 Score=60.62 Aligned_cols=50 Identities=18% Similarity=0.317 Sum_probs=35.7
Q ss_pred HhhhcCCCEEEEccCCCCcccchhhHHH-------HHHhhhcCceeeEEEEecCCCCc
Q 025145 183 ARRAASLPILLTHGLCDDVVPYKYGEKS-------ANCLSISGFRHLTFKSFEGLGHY 233 (257)
Q Consensus 183 ~~~~~~~P~l~~~G~~D~~v~~~~~~~~-------~~~l~~~~~~~~~~~~~~g~~H~ 233 (257)
..+.+.+|++++.+..|.++|++++..+ .+.++..|. .+-+.+-+..||.
T Consensus 292 DLr~Ir~Piivfas~gDnITPP~QaL~WI~dlY~~~~ei~a~gQ-~IVY~~h~~vGHL 348 (581)
T PF11339_consen 292 DLRNIRSPIIVFASYGDNITPPQQALNWIPDLYPDTEEIKAAGQ-TIVYLLHESVGHL 348 (581)
T ss_pred ehhhCCCCEEEEeccCCCCCChhHhccchHhhcCCHHHHHhCCC-EEEEEecCCCCce
Confidence 4577899999999999999999988433 344444443 3344455778995
No 169
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=98.26 E-value=2.2e-05 Score=65.17 Aligned_cols=64 Identities=22% Similarity=0.294 Sum_probs=46.6
Q ss_pred CCCEEEEccCCCCcccchhhHHHHHHhhhcCc---------------------eeeEEEEecCCCCccCHHHHHHHHHHH
Q 025145 188 SLPILLTHGLCDDVVPYKYGEKSANCLSISGF---------------------RHLTFKSFEGLGHYTVPKEMDEVCNWL 246 (257)
Q Consensus 188 ~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~---------------------~~~~~~~~~g~~H~~~~~~~~~~~~~l 246 (257)
..+||+.+|..|-+||.-..+.+.+.+.-.+. .+.+++.+.++||.+..+.++.+.+.|
T Consensus 330 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~a~~m~ 409 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEAALQMF 409 (415)
T ss_dssp T-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHHH
T ss_pred cceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCHHHHHHHH
Confidence 49999999999999999888888888753211 146788999999999988888777777
Q ss_pred HHhcC
Q 025145 247 TARLG 251 (257)
Q Consensus 247 ~~~l~ 251 (257)
++++.
T Consensus 410 ~~fl~ 414 (415)
T PF00450_consen 410 RRFLK 414 (415)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 77664
No 170
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.22 E-value=7.3e-05 Score=54.66 Aligned_cols=87 Identities=21% Similarity=0.245 Sum_probs=56.1
Q ss_pred CceEEEEEccCCCCccc---hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025145 33 HQATIVWLHGLGDNGSS---WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~---~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
.+..|||+-|.+.---. -..+.+.|.+.+|..+.+..+.+ +.|+++. .+.++++++
T Consensus 35 ~~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ss----y~G~Gt~-----------------slk~D~edl 93 (299)
T KOG4840|consen 35 ESVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSS----YNGYGTF-----------------SLKDDVEDL 93 (299)
T ss_pred eEEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccc----ccccccc-----------------cccccHHHH
Confidence 34689999998865432 34577888889999999986632 2222211 123333444
Q ss_pred HHHhcc---CCCCceEEEEEechhHHHHHHHHHh
Q 025145 110 ANLLST---EPADVKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 110 ~~~~~~---~~~~~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
..++++ .....+|+|+|||-|+.-.+.++.+
T Consensus 94 ~~l~~Hi~~~~fSt~vVL~GhSTGcQdi~yYlTn 127 (299)
T KOG4840|consen 94 KCLLEHIQLCGFSTDVVLVGHSTGCQDIMYYLTN 127 (299)
T ss_pred HHHHHHhhccCcccceEEEecCccchHHHHHHHh
Confidence 444432 2223499999999999999988853
No 171
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.22 E-value=9.1e-05 Score=57.43 Aligned_cols=99 Identities=21% Similarity=0.299 Sum_probs=55.7
Q ss_pred eEEEEEccCCCCccc-----hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025145 35 ATIVWLHGLGDNGSS-----WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 35 ~~vi~~HG~~~~~~~-----~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
.+||+.||+|.+..+ +..+++.+ .|.-+.++..- .+ ...+|+ ..-.++++..++.+
T Consensus 26 ~P~ViwHG~GD~c~~~g~~~~~~l~~~~--~g~~~~~i~ig-------~~-~~~s~~---------~~~~~Qve~vce~l 86 (314)
T PLN02633 26 VPFIMLHGIGTQCSDATNANFTQLLTNL--SGSPGFCLEIG-------NG-VGDSWL---------MPLTQQAEIACEKV 86 (314)
T ss_pred CCeEEecCCCcccCCchHHHHHHHHHhC--CCCceEEEEEC-------CC-ccccce---------eCHHHHHHHHHHHH
Confidence 368899999987664 33344333 34444444310 01 111221 11244555555555
Q ss_pred HHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEecc
Q 025145 110 ANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSG 164 (257)
Q Consensus 110 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 164 (257)
.. .... . +-+.++|+|+||.++=.++.+.+. .+.+.-+|.+++
T Consensus 87 ~~-~~~l-~-~G~naIGfSQGGlflRa~ierc~~---------~p~V~nlISlgg 129 (314)
T PLN02633 87 KQ-MKEL-S-QGYNIVGRSQGNLVARGLIEFCDG---------GPPVYNYISLAG 129 (314)
T ss_pred hh-chhh-h-CcEEEEEEccchHHHHHHHHHCCC---------CCCcceEEEecC
Confidence 44 2222 2 269999999999999999987521 134666666654
No 172
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.17 E-value=0.0002 Score=56.10 Aligned_cols=195 Identities=13% Similarity=0.039 Sum_probs=104.2
Q ss_pred CCCCCceEEEEEccCCCCccch-------HHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhh
Q 025145 29 PKGKHQATIVWLHGLGDNGSSW-------SQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEG 101 (257)
Q Consensus 29 ~~~~~~~~vi~~HG~~~~~~~~-------~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 101 (257)
+..++...||+.-|.++..+.. ..+.+.....+.+|+.+++||-|.+ .| .....+
T Consensus 132 ~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S--~G----------------~~s~~d 193 (365)
T PF05677_consen 132 PEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSS--TG----------------PPSRKD 193 (365)
T ss_pred CCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccC--CC----------------CCCHHH
Confidence 4445667999999988776651 1122222246899999998853322 22 112466
Q ss_pred HHHHHHHHHHHhcc-C--CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEe-ccCCCCchhhhhcc-
Q 025145 102 LDASAAHIANLLST-E--PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGL-SGWLPGSRNLRNKI- 176 (257)
Q Consensus 102 ~~~~~~~~~~~~~~-~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~- 176 (257)
+..+..++.+++.+ . ...++|++.|||+||.++...+...... ..+.++-++.- .++-..........
T Consensus 194 Lv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~~~-------~~dgi~~~~ikDRsfssl~~vas~~~~ 266 (365)
T PF05677_consen 194 LVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEVLK-------GSDGIRWFLIKDRSFSSLAAVASQFFG 266 (365)
T ss_pred HHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcccc-------cCCCeeEEEEecCCcchHHHHHHHHHH
Confidence 66667777776654 2 2346999999999999999877643110 12223323222 22222111111111
Q ss_pred ----------c--cchHHHhhhcCCCEEEEccCC-------CCcccchhhHHHHHHhhhcCc-----eeeEEEEecCCCC
Q 025145 177 ----------E--GSHEAARRAASLPILLTHGLC-------DDVVPYKYGEKSANCLSISGF-----RHLTFKSFEGLGH 232 (257)
Q Consensus 177 ----------~--~~~~~~~~~~~~P~l~~~G~~-------D~~v~~~~~~~~~~~l~~~~~-----~~~~~~~~~g~~H 232 (257)
. -..........+|=+++++.+ |..++.+.+ ++..+.+... .+..++.-....|
T Consensus 267 ~~~~~l~~l~gWnidS~K~s~~l~cpeIii~~~d~~~~~i~Dgl~~~~~~--lA~~~l~~~~~~~~~~~Ki~i~~~~l~H 344 (365)
T PF05677_consen 267 PIGKLLIKLLGWNIDSAKNSEKLQCPEIIIYGVDSRSQLIGDGLFEPENC--LAAAFLDPPTAEKLSGKKIPIGERLLLH 344 (365)
T ss_pred HHHHHHHHHhccCCCchhhhccCCCCeEEEeccccchhhcccccCCcchh--hHHHhcCCcccccccccceecccccccc
Confidence 0 112223445679999999874 444444333 4444443210 0223444444566
Q ss_pred ccC--HHHHHHHHHHHHHhc
Q 025145 233 YTV--PKEMDEVCNWLTARL 250 (257)
Q Consensus 233 ~~~--~~~~~~~~~~l~~~l 250 (257)
.-. .+..+.+..-+.+.+
T Consensus 345 ~~~L~~~~~~~la~~I~~~~ 364 (365)
T PF05677_consen 345 NEPLDDETIQALAEHILDHF 364 (365)
T ss_pred cccCChHHHHHHHHHHHhhc
Confidence 533 445666666666544
No 173
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.15 E-value=1e-05 Score=64.91 Aligned_cols=102 Identities=22% Similarity=0.113 Sum_probs=68.3
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceE---EEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHH
Q 025145 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIK---WICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIA 110 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~---v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (257)
.-+++++||++.+...|..+...+...|+. +..++.++. ...........+....+.
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--------------------~~~~~~~~~~~ql~~~V~ 118 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGG--------------------DGTYSLAVRGEQLFAYVD 118 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhhhcchHHHhccccccccccc--------------------CCCccccccHHHHHHHHH
Confidence 448999999998988898888777767776 666664421 001111223344455555
Q ss_pred HHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccC
Q 025145 111 NLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGW 165 (257)
Q Consensus 111 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 165 (257)
+.+..... .++.|+||||||.++..++... ..+.+++.++.+++.
T Consensus 119 ~~l~~~ga-~~v~LigHS~GG~~~ry~~~~~---------~~~~~V~~~~tl~tp 163 (336)
T COG1075 119 EVLAKTGA-KKVNLIGHSMGGLDSRYYLGVL---------GGANRVASVVTLGTP 163 (336)
T ss_pred HHHhhcCC-CceEEEeecccchhhHHHHhhc---------CccceEEEEEEeccC
Confidence 55544433 3999999999999999888754 223678888877664
No 174
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.15 E-value=7.9e-06 Score=69.89 Aligned_cols=152 Identities=16% Similarity=0.101 Sum_probs=77.6
Q ss_pred ceEEEEEccCCCCccchHHHhhcCC----------------CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCC
Q 025145 34 QATIVWLHGLGDNGSSWSQLLESLP----------------LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPE 97 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~----------------~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~ 97 (257)
.-+|+|++|..|+...-+.++.... ...++.+++|.-+. +.. ..+..-.+
T Consensus 89 GIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe-------------~tA-m~G~~l~d 154 (973)
T KOG3724|consen 89 GIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEE-------------FTA-MHGHILLD 154 (973)
T ss_pred CceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccch-------------hhh-hccHhHHH
Confidence 4589999999988877665444322 12334444442110 000 00000112
Q ss_pred chhhHHHHHHHHHHHhcc--CCC---CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEecc-----CCC
Q 025145 98 DWEGLDASAAHIANLLST--EPA---DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSG-----WLP 167 (257)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~--~~~---~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-----~~~ 167 (257)
+.+-+.+++..+.++.+. +.. +..|+++||||||.+|..++.... ..+..+.-++..+. .++
T Consensus 155 QtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn--------~~~~sVntIITlssPH~a~Pl~ 226 (973)
T KOG3724|consen 155 QTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKN--------EVQGSVNTIITLSSPHAAPPLP 226 (973)
T ss_pred HHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhh--------hccchhhhhhhhcCcccCCCCC
Confidence 334455556666666655 222 346999999999999999887410 11333444444433 344
Q ss_pred CchhhhhccccchHHH---hh------hcCC-CEEEEccCCCCcccchhh
Q 025145 168 GSRNLRNKIEGSHEAA---RR------AASL-PILLTHGLCDDVVPYKYG 207 (257)
Q Consensus 168 ~~~~~~~~~~~~~~~~---~~------~~~~-P~l~~~G~~D~~v~~~~~ 207 (257)
....+.+.+....... .. ...+ =+-+.-|-.|..||.+..
T Consensus 227 ~D~~l~~fy~~vnn~W~k~~~~~~~~~ls~V~vVSisGG~~Dy~V~se~s 276 (973)
T KOG3724|consen 227 LDRFLLRFYLLVNNYWNKLQNNNSDPLLSHVGVVSISGGIRDYQVPSELS 276 (973)
T ss_pred CcHHHHHHHHHHHHHHHHHHhccccchhcceEEEEEecCccccccCcchh
Confidence 4444433332211111 11 1222 234445778999887654
No 175
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.11 E-value=7.3e-06 Score=67.61 Aligned_cols=96 Identities=15% Similarity=0.038 Sum_probs=57.6
Q ss_pred CCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhccCCCCceEEE
Q 025145 45 DNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTEPADVKVGI 124 (257)
Q Consensus 45 ~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l 124 (257)
.....|..+++.|.+.||.+ ..|+++.|+ +.+.. ......+.+....+.++.+.... .++.|
T Consensus 105 ~~~~~~~~li~~L~~~GY~~-~~dL~g~gY------------DwR~~----~~~~~~~~~Lk~lIe~~~~~~g~-~kV~L 166 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGYKE-GKTLFGFGY------------DFRQS----NRLPETMDGLKKKLETVYKASGG-KKVNI 166 (440)
T ss_pred chHHHHHHHHHHHHHcCCcc-CCCcccCCC------------Ccccc----ccHHHHHHHHHHHHHHHHHHcCC-CCEEE
Confidence 34466888999999888865 678776542 21110 00112233333344444433333 49999
Q ss_pred EEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccC
Q 025145 125 GGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGW 165 (257)
Q Consensus 125 ~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 165 (257)
+||||||.++..++.+.+. .....++.+|.+++.
T Consensus 167 VGHSMGGlva~~fl~~~p~-------~~~k~I~~~I~la~P 200 (440)
T PLN02733 167 ISHSMGGLLVKCFMSLHSD-------VFEKYVNSWIAIAAP 200 (440)
T ss_pred EEECHhHHHHHHHHHHCCH-------hHHhHhccEEEECCC
Confidence 9999999999999875421 112346777777654
No 176
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.06 E-value=0.00012 Score=57.73 Aligned_cols=120 Identities=12% Similarity=0.080 Sum_probs=65.6
Q ss_pred CCceEEEEEccCCCCccc-hHHHhhcCC--CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHH
Q 025145 32 KHQATIVWLHGLGDNGSS-WSQLLESLP--LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAH 108 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~-~~~~~~~l~--~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 108 (257)
..+.+++|+||+..+-.+ -.+.++... ......+.+-+|-+|.-. + +..+......... ..+.
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~----------~---Yn~DreS~~~Sr~-aLe~ 179 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLL----------G---YNYDRESTNYSRP-ALER 179 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeee----------e---cccchhhhhhhHH-HHHH
Confidence 456799999998877654 223333332 244555666666433211 1 1111111112222 2333
Q ss_pred HHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCC
Q 025145 109 IANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPG 168 (257)
Q Consensus 109 ~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 168 (257)
+...|.+....++|.|++||||.++++..+.+...... ...+.+++-+|+.++=.+.
T Consensus 180 ~lr~La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~---~~l~~ki~nViLAaPDiD~ 236 (377)
T COG4782 180 LLRYLATDKPVKRIYLLAHSMGTWLLMEALRQLAIRAD---RPLPAKIKNVILAAPDIDV 236 (377)
T ss_pred HHHHHHhCCCCceEEEEEecchHHHHHHHHHHHhccCC---cchhhhhhheEeeCCCCCh
Confidence 33333344434599999999999999999875422111 1146678888888775443
No 177
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=98.03 E-value=0.00022 Score=53.55 Aligned_cols=188 Identities=21% Similarity=0.245 Sum_probs=97.0
Q ss_pred CCceEEEEEccC--CCCcc-chHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHH
Q 025145 32 KHQATIVWLHGL--GDNGS-SWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAH 108 (257)
Q Consensus 32 ~~~~~vi~~HG~--~~~~~-~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 108 (257)
+|+.+|=|+-|. |.... .|+.+.+.|+++||.|++.-+.. + |+-... ...-...+....+.
T Consensus 15 ~P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-------t------fDH~~~---A~~~~~~f~~~~~~ 78 (250)
T PF07082_consen 15 RPKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-------T------FDHQAI---AREVWERFERCLRA 78 (250)
T ss_pred CCCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-------C------CcHHHH---HHHHHHHHHHHHHH
Confidence 466677777773 33333 48889999999999999965320 0 100000 00011122222222
Q ss_pred HHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEec--c-----CCCCchhhhhc----cc
Q 025145 109 IANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLS--G-----WLPGSRNLRNK----IE 177 (257)
Q Consensus 109 ~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~-----~~~~~~~~~~~----~~ 177 (257)
+.+-.......-+++=+|||+|+-+-+.+.... +..-++-+++| . .+|..+.+... +.
T Consensus 79 L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~-----------~~~r~gniliSFNN~~a~~aIP~~~~l~~~l~~EF~ 147 (250)
T PF07082_consen 79 LQKRGGLDPAYLPVYGVGHSLGCKLHLLIGSLF-----------DVERAGNILISFNNFPADEAIPLLEQLAPALRLEFT 147 (250)
T ss_pred HHHhcCCCcccCCeeeeecccchHHHHHHhhhc-----------cCcccceEEEecCChHHHhhCchHhhhccccccCcc
Confidence 221111111113788899999999999887642 33334444443 1 12222211111 11
Q ss_pred cchHHHh-----hhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC--H----------HHHH
Q 025145 178 GSHEAAR-----RAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV--P----------KEMD 240 (257)
Q Consensus 178 ~~~~~~~-----~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~--~----------~~~~ 240 (257)
..+.... .-.-..+++|-=.+|.+ ++...+.+.++......++....+| .|... + .-.+
T Consensus 148 PsP~ET~~li~~~Y~~~rnLLIkF~~D~i---Dqt~~L~~~L~~r~~~~~~~~~L~G-~HLTPl~q~~~~~~g~~ftP~d 223 (250)
T PF07082_consen 148 PSPEETRRLIRESYQVRRNLLIKFNDDDI---DQTDELEQILQQRFPDMVSIQTLPG-NHLTPLGQDLKWQVGSSFTPLD 223 (250)
T ss_pred CCHHHHHHHHHHhcCCccceEEEecCCCc---cchHHHHHHHhhhccccceEEeCCC-CCCCcCcCCcCCccCCccCchH
Confidence 1111111 11233467777777766 5667777777755333467788886 99643 1 1246
Q ss_pred HHHHHHHHhc
Q 025145 241 EVCNWLTARL 250 (257)
Q Consensus 241 ~~~~~l~~~l 250 (257)
.+.+|+++.+
T Consensus 224 a~~q~~k~~~ 233 (250)
T PF07082_consen 224 AVGQWLKQEV 233 (250)
T ss_pred HHHHHHHHHH
Confidence 6777776644
No 178
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.03 E-value=1.6e-05 Score=55.47 Aligned_cols=167 Identities=13% Similarity=0.100 Sum_probs=97.2
Q ss_pred EEEEEccCCCCccchH------HHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025145 36 TIVWLHGLGDNGSSWS------QLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 36 ~vi~~HG~~~~~~~~~------~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
+||.+.-.++.-..|. .+++.+...-...++++ |-...+|+.... +..+-...-.++
T Consensus 28 pVvvFpts~Grf~eyed~G~v~ala~fie~G~vQlft~~----------gldsESf~a~h~-------~~adr~~rH~Ay 90 (227)
T COG4947 28 PVVVFPTSGGRFNEYEDFGMVDALASFIEEGLVQLFTLS----------GLDSESFLATHK-------NAADRAERHRAY 90 (227)
T ss_pred cEEEEecCCCcchhhhhcccHHHHHHHHhcCcEEEEEec----------ccchHhHhhhcC-------CHHHHHHHHHHH
Confidence 4444444444444443 34455554455666666 222334443311 122223333444
Q ss_pred HHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccc------------
Q 025145 110 ANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIE------------ 177 (257)
Q Consensus 110 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~------------ 177 (257)
..++.++..+....+-|.||||+.|..+..++ |..+.++|++||.++..+.+-..+.
T Consensus 91 erYv~eEalpgs~~~sgcsmGayhA~nfvfrh-----------P~lftkvialSGvYdardffg~yyddDv~ynsP~dyl 159 (227)
T COG4947 91 ERYVIEEALPGSTIVSGCSMGAYHAANFVFRH-----------PHLFTKVIALSGVYDARDFFGGYYDDDVYYNSPSDYL 159 (227)
T ss_pred HHHHHHhhcCCCccccccchhhhhhhhhheeC-----------hhHhhhheeecceeeHHHhccccccCceeecChhhhc
Confidence 44444443334778899999999999999975 8999999999997654433222111
Q ss_pred ---cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCc
Q 025145 178 ---GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHY 233 (257)
Q Consensus 178 ---~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~ 233 (257)
..+........+.+.+..|.+|+..+. .+.+.+.+.++.+ +..+.+..|..|.
T Consensus 160 pg~~dp~~l~rlr~~~~vfc~G~e~~~L~~--~~~L~~~l~dKqi-paw~~~WggvaHd 215 (227)
T COG4947 160 PGLADPFRLERLRRIDMVFCIGDEDPFLDN--NQHLSRLLSDKQI-PAWMHVWGGVAHD 215 (227)
T ss_pred cCCcChHHHHHHhhccEEEEecCccccccc--hHHHHHHhccccc-cHHHHHhcccccc
Confidence 112233455577888899998887654 5667777776655 3445555555554
No 179
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.01 E-value=3.4e-05 Score=60.70 Aligned_cols=89 Identities=18% Similarity=0.147 Sum_probs=62.3
Q ss_pred eEEEEEccCCCCccchHHHhhcCCCC---------ceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025145 35 ATIVWLHGLGDNGSSWSQLLESLPLP---------NIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 35 ~~vi~~HG~~~~~~~~~~~~~~l~~~---------g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
-+++++||+.++-.++..++..|... -+.||+|.+||-|.+..... .--...+.
T Consensus 153 ~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk-----------------~GFn~~a~ 215 (469)
T KOG2565|consen 153 KPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSK-----------------TGFNAAAT 215 (469)
T ss_pred cceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCcc-----------------CCccHHHH
Confidence 48999999999999998888887643 47999999997554432211 01112333
Q ss_pred HHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhc
Q 025145 106 AAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 106 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
+.-+.+++-...-+ +++|-|-.||..++..++...
T Consensus 216 ArvmrkLMlRLg~n-kffiqGgDwGSiI~snlasLy 250 (469)
T KOG2565|consen 216 ARVMRKLMLRLGYN-KFFIQGGDWGSIIGSNLASLY 250 (469)
T ss_pred HHHHHHHHHHhCcc-eeEeecCchHHHHHHHHHhhc
Confidence 44444554444333 999999999999999999853
No 180
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.96 E-value=0.00024 Score=53.53 Aligned_cols=87 Identities=26% Similarity=0.413 Sum_probs=51.7
Q ss_pred eEEEEEccCCCCccc--hHHHhhcCC-CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025145 35 ATIVWLHGLGDNGSS--WSQLLESLP-LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 35 ~~vi~~HG~~~~~~~--~~~~~~~l~-~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
-++|++||++++..+ +..+.+.+. ..|..|++.|.- .|. ..+|+ ..-++++....+.+.
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~leig-------~g~-~~s~l---------~pl~~Qv~~~ce~v~- 85 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEIG-------DGI-KDSSL---------MPLWEQVDVACEKVK- 85 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEec-------CCc-chhhh---------ccHHHHHHHHHHHHh-
Confidence 368899999988776 444444443 258888887731 120 01111 112334444444443
Q ss_pred HhccCCCCceEEEEEechhHHHHHHHHHhc
Q 025145 112 LLSTEPADVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
... +. ..-+.++|.|+||.++-.++..-
T Consensus 86 ~m~-~l-sqGynivg~SQGglv~Raliq~c 113 (296)
T KOG2541|consen 86 QMP-EL-SQGYNIVGYSQGGLVARALIQFC 113 (296)
T ss_pred cch-hc-cCceEEEEEccccHHHHHHHHhC
Confidence 111 12 23789999999999999998864
No 181
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.94 E-value=4.7e-05 Score=58.40 Aligned_cols=102 Identities=20% Similarity=0.271 Sum_probs=47.1
Q ss_pred eEEEEEccCCCCcc---chHH---HhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHH
Q 025145 35 ATIVWLHGLGDNGS---SWSQ---LLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAH 108 (257)
Q Consensus 35 ~~vi~~HG~~~~~~---~~~~---~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 108 (257)
.+||+.||+|.+.. .+.. +++.. ..|.-|.+++.-. +. . -+. ...-...+.+.++.
T Consensus 6 ~PvViwHGmGD~~~~~~~m~~i~~~i~~~-~PG~yV~si~ig~-------~~--~--~D~------~~s~f~~v~~Qv~~ 67 (279)
T PF02089_consen 6 LPVVIWHGMGDSCCNPSSMGSIKELIEEQ-HPGTYVHSIEIGN-------DP--S--EDV------ENSFFGNVNDQVEQ 67 (279)
T ss_dssp --EEEE--TT--S--TTTHHHHHHHHHHH-STT--EEE--SSS-------SH--H--HHH------HHHHHSHHHHHHHH
T ss_pred CcEEEEEcCccccCChhHHHHHHHHHHHh-CCCceEEEEEECC-------Cc--c--hhh------hhhHHHHHHHHHHH
Confidence 47899999997642 3433 33333 2677777776320 00 0 000 00001223333444
Q ss_pred HHHHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEecc
Q 025145 109 IANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSG 164 (257)
Q Consensus 109 ~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 164 (257)
+-+.++... ..+-+.++|+|+||.+.=.++.+.+ .+.+.-+|.+++
T Consensus 68 vc~~l~~~p~L~~G~~~IGfSQGgl~lRa~vq~c~----------~~~V~nlISlgg 114 (279)
T PF02089_consen 68 VCEQLANDPELANGFNAIGFSQGGLFLRAYVQRCN----------DPPVHNLISLGG 114 (279)
T ss_dssp HHHHHHH-GGGTT-EEEEEETCHHHHHHHHHHH-T----------SS-EEEEEEES-
T ss_pred HHHHHhhChhhhcceeeeeeccccHHHHHHHHHCC----------CCCceeEEEecC
Confidence 444443321 1237999999999999999998742 346788888766
No 182
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=97.89 E-value=7.6e-05 Score=62.65 Aligned_cols=122 Identities=14% Similarity=0.045 Sum_probs=72.7
Q ss_pred CCCCCceEEeCCCCCCceEEEEEccCCCCcc-----chHHHhh---cCCCCceEEEccCCCCCCcccCCCCcccccccCC
Q 025145 18 TFEFGRTHVVRPKGKHQATIVWLHGLGDNGS-----SWSQLLE---SLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVG 89 (257)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~vi~~HG~~~~~~-----~~~~~~~---~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~ 89 (257)
++.+...++.+....+.|+++..+-+.-.+. ....... .++.+||.|+..|.||++.+. |. ++..
T Consensus 29 GvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~Se--G~-----~~~~ 101 (563)
T COG2936 29 GVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSE--GV-----FDPE 101 (563)
T ss_pred CeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCC--cc-----ccee
Confidence 3444444555555678899998882221111 1223334 577899999999999875432 21 1110
Q ss_pred CCCCCCCCchhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccC
Q 025145 90 ELSDDGPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGW 165 (257)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 165 (257)
. .. ...+.++.|..+.++.--+.+|+.+|.|++|+..+.+|+.. |+.+++++..++.
T Consensus 102 ~-----~~---E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~-----------pPaLkai~p~~~~ 158 (563)
T COG2936 102 S-----SR---EAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQ-----------PPALKAIAPTEGL 158 (563)
T ss_pred c-----cc---cccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcC-----------Cchheeecccccc
Confidence 0 00 11222333333333333334999999999999999999954 7778887766553
No 183
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=97.88 E-value=0.00013 Score=53.91 Aligned_cols=36 Identities=17% Similarity=0.185 Sum_probs=26.9
Q ss_pred EEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC
Q 025145 192 LLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV 235 (257)
Q Consensus 192 l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 235 (257)
..+.|++|.++|++..+++.+.. +.+.+++ ++|+..
T Consensus 169 ~aiIg~~D~IFpp~nQ~~~W~~~-------~~~~~~~-~~Hy~F 204 (213)
T PF04301_consen 169 KAIIGKKDRIFPPENQKRAWQGR-------CTIVEID-APHYPF 204 (213)
T ss_pred EEEEcCCCEEeCHHHHHHHHhCc-------CcEEEec-CCCcCc
Confidence 37889999999998887777642 2455666 699865
No 184
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.84 E-value=0.00012 Score=51.82 Aligned_cols=74 Identities=18% Similarity=0.047 Sum_probs=48.4
Q ss_pred CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHHhhhcCCCEEEEccC
Q 025145 118 ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGL 197 (257)
Q Consensus 118 ~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~G~ 197 (257)
...++.++|||+||.+|..++.+... ........++.++++......+.. ..........+..++..
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~~-------~~~~~~~~~~~fg~p~~~~~~~~~------~~~~~~~~~~~~~i~~~ 92 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLRG-------RGLGRLVRVYTFGPPRVGNAAFAE------DRLDPSDALFVDRIVND 92 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHHh-------ccCCCceEEEEeCCCcccchHHHH------HhhhccCCccEEEEEEC
Confidence 34599999999999999999886411 002356667788776655544332 01122345678888888
Q ss_pred CCCcccc
Q 025145 198 CDDVVPY 204 (257)
Q Consensus 198 ~D~~v~~ 204 (257)
.|.+...
T Consensus 93 ~D~v~~~ 99 (153)
T cd00741 93 NDIVPRL 99 (153)
T ss_pred CCccCCC
Confidence 8876543
No 185
>PLN02209 serine carboxypeptidase
Probab=97.79 E-value=0.0043 Score=51.63 Aligned_cols=63 Identities=19% Similarity=0.248 Sum_probs=48.1
Q ss_pred CCCEEEEccCCCCcccchhhHHHHHHhhhcC---------------c----ee-eEEEEecCCCCccCHHHHHHHHHHHH
Q 025145 188 SLPILLTHGLCDDVVPYKYGEKSANCLSISG---------------F----RH-LTFKSFEGLGHYTVPKEMDEVCNWLT 247 (257)
Q Consensus 188 ~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~---------------~----~~-~~~~~~~g~~H~~~~~~~~~~~~~l~ 247 (257)
.+++|+..|+.|-+|+.-..+.+.+.++-.+ . .+ .++..+.++||.+. ..++...+-+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 5799999999999999988888888886211 1 23 77888899999994 56666666666
Q ss_pred HhcC
Q 025145 248 ARLG 251 (257)
Q Consensus 248 ~~l~ 251 (257)
+++.
T Consensus 430 ~fi~ 433 (437)
T PLN02209 430 RWIS 433 (437)
T ss_pred HHHc
Confidence 6654
No 186
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=97.74 E-value=0.0049 Score=51.29 Aligned_cols=64 Identities=19% Similarity=0.242 Sum_probs=47.8
Q ss_pred cCCCEEEEccCCCCcccchhhHHHHHHhhhcC---------------c----ee-eEEEEecCCCCccCHHHHHHHHHHH
Q 025145 187 ASLPILLTHGLCDDVVPYKYGEKSANCLSISG---------------F----RH-LTFKSFEGLGHYTVPKEMDEVCNWL 246 (257)
Q Consensus 187 ~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~---------------~----~~-~~~~~~~g~~H~~~~~~~~~~~~~l 246 (257)
...+||+..|+.|-+||.-..+.+.+.|+-.+ . .+ .++..+.++||.+. ..++...+-+
T Consensus 346 ~~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~ 424 (433)
T PLN03016 346 SGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMF 424 (433)
T ss_pred cCceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHH
Confidence 35899999999999999988888888876221 1 12 67888899999995 4566666666
Q ss_pred HHhcC
Q 025145 247 TARLG 251 (257)
Q Consensus 247 ~~~l~ 251 (257)
.+++.
T Consensus 425 ~~Fi~ 429 (433)
T PLN03016 425 QRWIS 429 (433)
T ss_pred HHHHc
Confidence 66554
No 187
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.70 E-value=0.00014 Score=47.63 Aligned_cols=56 Identities=27% Similarity=0.339 Sum_probs=47.4
Q ss_pred CCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCH----HHHHHHHHHHHH
Q 025145 188 SLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVP----KEMDEVCNWLTA 248 (257)
Q Consensus 188 ~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~----~~~~~~~~~l~~ 248 (257)
..|+|++.++.|.++|++.++.+.+.+. +.+++.++|.||.... -..+.+.+||..
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~-----~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLP-----GSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCC-----CceEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 5999999999999999999999999998 5689999999998762 234666677764
No 188
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=97.63 E-value=0.00042 Score=54.21 Aligned_cols=144 Identities=15% Similarity=0.123 Sum_probs=81.6
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025145 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
+.+..||++-|..+-.+. ..+..=++.||.|+..++||.+ .+.|-+ | ........+..++....
T Consensus 241 ngq~LvIC~EGNAGFYEv--G~m~tP~~lgYsvLGwNhPGFa--gSTG~P----~--------p~n~~nA~DaVvQfAI~ 304 (517)
T KOG1553|consen 241 NGQDLVICFEGNAGFYEV--GVMNTPAQLGYSVLGWNHPGFA--GSTGLP----Y--------PVNTLNAADAVVQFAIQ 304 (517)
T ss_pred CCceEEEEecCCccceEe--eeecChHHhCceeeccCCCCcc--ccCCCC----C--------cccchHHHHHHHHHHHH
Confidence 446689999986654331 1111112579999999998532 111211 0 11112222222222222
Q ss_pred HhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhh----------------hc
Q 025145 112 LLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLR----------------NK 175 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----------------~~ 175 (257)
.+. ...+.|++.|+|.||+.+..+|.. -+.++++|+-+.|-+...... ..
T Consensus 305 ~Lg--f~~edIilygWSIGGF~~~waAs~------------YPdVkavvLDAtFDDllpLAl~rMP~~~~giV~~aiRnh 370 (517)
T KOG1553|consen 305 VLG--FRQEDIILYGWSIGGFPVAWAASN------------YPDVKAVVLDATFDDLLPLALFRMPTFFSGIVEHAIRNH 370 (517)
T ss_pred HcC--CCccceEEEEeecCCchHHHHhhc------------CCCceEEEeecchhhhhhHHhhhchHHHHHHHHHHHHHh
Confidence 222 234589999999999999999984 356899987766533221111 11
Q ss_pred cccchHHHhhhcCCCEEEEccCCCCcccch
Q 025145 176 IEGSHEAARRAASLPILLTHGLCDDVVPYK 205 (257)
Q Consensus 176 ~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~ 205 (257)
+.-........-+.|+.+|.-++|+++...
T Consensus 371 ~NLnnaell~ry~GPi~lIRRt~dEIitt~ 400 (517)
T KOG1553|consen 371 MNLNNAELLARYKGPIRLIRRTQDEIITTA 400 (517)
T ss_pred cccchHHHHHhhcCchhHhhhhhHhhhhcc
Confidence 111222344556889999999999887654
No 189
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=97.54 E-value=0.015 Score=48.30 Aligned_cols=97 Identities=16% Similarity=0.084 Sum_probs=59.0
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCC------------------CCceEEEccCCCCCCcccCCCCcccccccCCCC-C
Q 025145 32 KHQATIVWLHGLGDNGSSWSQLLESLP------------------LPNIKWICPTAPTRPVAILGGFPCTAWFDVGEL-S 92 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~------------------~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~-~ 92 (257)
...|+|||+-|..+++..- .+...+. .+-..++.+|.|- .-| |+.... .
T Consensus 71 ~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~Pv-----GvG------FSYs~~~~ 138 (454)
T KOG1282|consen 71 ETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQPV-----GVG------FSYSNTSS 138 (454)
T ss_pred CCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEEecCC-----cCC------ccccCCCC
Confidence 3478999999998877543 2222221 1234666777662 112 222111 1
Q ss_pred CCCCCchhhHHHHHHHHHHHhccC--CCCceEEEEEechhHHHHHHHHHh
Q 025145 93 DDGPEDWEGLDASAAHIANLLSTE--PADVKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
.....+.....+....|.+++++. ....+++|.|.|++|...-.+|.+
T Consensus 139 ~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~ 188 (454)
T KOG1282|consen 139 DYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQE 188 (454)
T ss_pred cCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHH
Confidence 112345556677777788888764 334599999999999877777764
No 190
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=97.49 E-value=0.00067 Score=58.51 Aligned_cols=97 Identities=16% Similarity=0.138 Sum_probs=60.4
Q ss_pred ceEEEEEccCCCCccc---h--HHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHH
Q 025145 34 QATIVWLHGLGDNGSS---W--SQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAH 108 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~---~--~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 108 (257)
.|++|++||.+-.... + ......+......|+.+.+|.-.++. +..+...........+......+
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF---------~st~d~~~~gN~gl~Dq~~AL~w 182 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGF---------LSTGDSAAPGNLGLFDQLLALRW 182 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceecee---------eecCCCCCCCcccHHHHHHHHHH
Confidence 7999999997532222 2 12222333457888888877532221 11121111233334466667777
Q ss_pred HHHHhccCC-CCceEEEEEechhHHHHHHHHH
Q 025145 109 IANLLSTEP-ADVKVGIGGFSMGAAVALYSAT 139 (257)
Q Consensus 109 ~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~ 139 (257)
+.+.|.... ++++|.|+|||.||..+..++.
T Consensus 183 v~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~ 214 (545)
T KOG1516|consen 183 VKDNIPSFGGDPKNVTLFGHSAGAASVSLLTL 214 (545)
T ss_pred HHHHHHhcCCCCCeEEEEeechhHHHHHHHhc
Confidence 777777764 4479999999999999988876
No 191
>PLN02606 palmitoyl-protein thioesterase
Probab=97.47 E-value=0.00073 Score=52.49 Aligned_cols=54 Identities=19% Similarity=0.107 Sum_probs=34.8
Q ss_pred hhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEecc
Q 025145 99 WEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSG 164 (257)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 164 (257)
.++++..++.+.. .... . +-+.++|+|+||.+.=.++.+.+. .+.+.-+|.+++
T Consensus 77 ~~Qv~~vce~l~~-~~~L-~-~G~naIGfSQGglflRa~ierc~~---------~p~V~nlISlgg 130 (306)
T PLN02606 77 RQQASIACEKIKQ-MKEL-S-EGYNIVAESQGNLVARGLIEFCDN---------APPVINYVSLGG 130 (306)
T ss_pred HHHHHHHHHHHhc-chhh-c-CceEEEEEcchhHHHHHHHHHCCC---------CCCcceEEEecC
Confidence 4455555555544 2222 2 268999999999999999987521 134666666654
No 192
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.21 E-value=0.00089 Score=46.51 Aligned_cols=37 Identities=24% Similarity=0.307 Sum_probs=27.7
Q ss_pred HHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhc
Q 025145 104 ASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
...+.+.+++++... .++.+.|||+||.+|..++...
T Consensus 49 ~~~~~l~~~~~~~~~-~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 49 QILDALKELVEKYPD-YSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHSTT-SEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccC-ccchhhccchHHHHHHHHHHhh
Confidence 445555555555443 4999999999999999999864
No 193
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.14 E-value=0.00095 Score=54.83 Aligned_cols=43 Identities=19% Similarity=0.159 Sum_probs=30.9
Q ss_pred CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCC
Q 025145 119 DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWL 166 (257)
Q Consensus 119 ~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 166 (257)
..+++|+||||||.++..++........ ....|+++|.+++..
T Consensus 118 ~~kv~li~HSmGgl~~~~fl~~~~~~~W-----~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 118 GKKVVLIAHSMGGLVARYFLQWMPQEEW-----KDKYIKRFISIGTPF 160 (389)
T ss_pred CCcEEEEEeCCCchHHHHHHHhccchhh-----HHhhhhEEEEeCCCC
Confidence 4599999999999999999886411000 134588888887653
No 194
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.08 E-value=0.0018 Score=48.79 Aligned_cols=56 Identities=21% Similarity=0.310 Sum_probs=39.6
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccC
Q 025145 101 GLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGW 165 (257)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 165 (257)
....++..+.+.++.... ++.+.|||.||.+|...+... .....+++..+..+.++
T Consensus 67 ~q~~A~~yl~~~~~~~~~--~i~v~GHSkGGnLA~yaa~~~-------~~~~~~rI~~vy~fDgP 122 (224)
T PF11187_consen 67 QQKSALAYLKKIAKKYPG--KIYVTGHSKGGNLAQYAAANC-------DDEIQDRISKVYSFDGP 122 (224)
T ss_pred HHHHHHHHHHHHHHhCCC--CEEEEEechhhHHHHHHHHHc-------cHHHhhheeEEEEeeCC
Confidence 345556666666655432 699999999999999999863 11235678888887664
No 195
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.07 E-value=0.046 Score=43.80 Aligned_cols=64 Identities=17% Similarity=0.137 Sum_probs=54.0
Q ss_pred CCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC-----HHHHHHHHHHHHHhcCc
Q 025145 188 SLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV-----PKEMDEVCNWLTARLGL 252 (257)
Q Consensus 188 ~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-----~~~~~~~~~~l~~~l~~ 252 (257)
..+.+.+.+..|.++|.+..+++.+..++.|+ +++..-+.++.|..+ ....+...+|++.....
T Consensus 225 ~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~-~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~~ 293 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLPADEIEKFIALRREKGV-NVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVISS 293 (350)
T ss_pred cccceeecCCccccccHHHHHHHHHHHHhcCc-eEEEeeccCccceeeeccCcHHHHHHHHHHHHhcccc
Confidence 67889999999999999999999999999888 788888888888544 66778899999886554
No 196
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.91 E-value=0.0086 Score=43.85 Aligned_cols=23 Identities=17% Similarity=0.075 Sum_probs=20.6
Q ss_pred CceEEEEEechhHHHHHHHHHhc
Q 025145 119 DVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 119 ~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
...++++.||.||..++.+..+.
T Consensus 189 ~~sv~vvahsyGG~~t~~l~~~f 211 (297)
T KOG3967|consen 189 AESVFVVAHSYGGSLTLDLVERF 211 (297)
T ss_pred cceEEEEEeccCChhHHHHHHhc
Confidence 34899999999999999999975
No 197
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=96.91 E-value=0.0024 Score=50.60 Aligned_cols=60 Identities=13% Similarity=0.092 Sum_probs=47.8
Q ss_pred hhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHH-HHHHHHH
Q 025145 185 RAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDE-VCNWLTA 248 (257)
Q Consensus 185 ~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~-~~~~l~~ 248 (257)
.....|-.|+.+..|.++.++.+.-+++.|+. ...+..+|+..|...++..+. +..|+..
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG----~kaLrmvPN~~H~~~n~~i~esl~~flnr 386 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPG----EKALRMVPNDPHNLINQFIKESLEPFLNR 386 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCC----ceeeeeCCCCcchhhHHHHHHHHHHHHHH
Confidence 45688999999999999999999999999985 457889999999988765543 3334433
No 198
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.89 E-value=0.0023 Score=47.11 Aligned_cols=40 Identities=15% Similarity=0.049 Sum_probs=33.8
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHh
Q 025145 101 GLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
.+.+...++..++++.....+++|+|||+|+.+...++..
T Consensus 76 ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e 115 (207)
T PF11288_consen 76 AYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKE 115 (207)
T ss_pred hHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHH
Confidence 4566777778888887766799999999999999999885
No 199
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.81 E-value=0.0072 Score=48.75 Aligned_cols=132 Identities=14% Similarity=0.073 Sum_probs=74.2
Q ss_pred cCCCCCceEEeCCC--CCCceEEEEEccCCCCccchHH---HhhcCC-CCceEEEccCCCCCCcccCCCCcccccccCCC
Q 025145 17 RTFEFGRTHVVRPK--GKHQATIVWLHGLGDNGSSWSQ---LLESLP-LPNIKWICPTAPTRPVAILGGFPCTAWFDVGE 90 (257)
Q Consensus 17 ~~~~~~~~~~~~~~--~~~~~~vi~~HG~~~~~~~~~~---~~~~l~-~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~ 90 (257)
...+|...|.+... .+...+|+|.-|.-++-..+.. ++-.++ +.+.-+|.+++|.-|.+..-|.. + + ..
T Consensus 61 ~~~tF~qRylin~~fw~~g~gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~--s-~--k~ 135 (492)
T KOG2183|consen 61 DNKTFDQRYLINDDFWKKGEGPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQ--S-Y--KD 135 (492)
T ss_pred CccceeeEEEEecccccCCCCceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcch--h-c--cC
Confidence 34455566666543 2333689999997776654432 222222 44678888898877766554432 1 0 00
Q ss_pred CCCCCCCchhhHHHHHHHHHHHhccCC--CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEecc
Q 025145 91 LSDDGPEDWEGLDASAAHIANLLSTEP--ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSG 164 (257)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 164 (257)
...-.-...++...+.+.+...++... ...+|+++|-|+||+++..+=. +||.-+.|+++-|.
T Consensus 136 ~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRl-----------KYPHiv~GAlAaSA 200 (492)
T KOG2183|consen 136 ARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRL-----------KYPHIVLGALAASA 200 (492)
T ss_pred hhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHh-----------cChhhhhhhhhccC
Confidence 000111122222223333334444332 1249999999999999988866 67887777765554
No 200
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=96.77 E-value=0.005 Score=51.59 Aligned_cols=128 Identities=14% Similarity=0.011 Sum_probs=62.4
Q ss_pred CCCceEEeCCC--CCCceEEEEEccCCCCccc-h--HHHhhcCC-CCceEEEccCCCCCCcccCCCCcccccccCCCCCC
Q 025145 20 EFGRTHVVRPK--GKHQATIVWLHGLGDNGSS-W--SQLLESLP-LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSD 93 (257)
Q Consensus 20 ~~~~~~~~~~~--~~~~~~vi~~HG~~~~~~~-~--~~~~~~l~-~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~ 93 (257)
+|...|.+... +++.|++|++-|=+ .... + ..+...|+ +.|-.++++++|.-|.+..-+.... ..
T Consensus 13 tf~qRY~~n~~~~~~~gpifl~~ggE~-~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~--------~n 83 (434)
T PF05577_consen 13 TFSQRYWVNDQYYKPGGPIFLYIGGEG-PIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLST--------EN 83 (434)
T ss_dssp EEEEEEEEE-TT--TTSEEEEEE--SS--HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGG--------ST
T ss_pred eEEEEEEEEhhhcCCCCCEEEEECCCC-ccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccch--------hh
Confidence 33344444332 33466666665533 2221 1 11333333 3578999999997766543221100 00
Q ss_pred CCCCchhhHHHHHHHHHHHhccCC---CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCC
Q 025145 94 DGPEDWEGLDASAAHIANLLSTEP---ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLP 167 (257)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 167 (257)
-.-...++..+++..+...++... ...|++++|-|+||.+|..+-. +||..+.+.++-|+.+.
T Consensus 84 L~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~-----------kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 84 LRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRL-----------KYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp TTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHH-----------H-TTT-SEEEEET--CC
T ss_pred HHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHh-----------hCCCeeEEEEeccceee
Confidence 111233333333333333333221 2249999999999999999988 56999999999888653
No 201
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=96.50 E-value=0.18 Score=42.03 Aligned_cols=97 Identities=19% Similarity=0.204 Sum_probs=57.6
Q ss_pred eEEeCCCCCCceEEEEEccCCCCccchH--HHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhh
Q 025145 24 THVVRPKGKHQATIVWLHGLGDNGSSWS--QLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEG 101 (257)
Q Consensus 24 ~~~~~~~~~~~~~vi~~HG~~~~~~~~~--~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 101 (257)
.+++.|+.-+.|..|++-|+-. ...+. .+++.|. .-+- +.-|.|..|-. |..+. ...+..
T Consensus 279 ~yYFnPGD~KPPL~VYFSGyR~-aEGFEgy~MMk~Lg-~PfL-L~~DpRleGGa----------FYlGs-----~eyE~~ 340 (511)
T TIGR03712 279 IYYFNPGDFKPPLNVYFSGYRP-AEGFEGYFMMKRLG-APFL-LIGDPRLEGGA----------FYLGS-----DEYEQG 340 (511)
T ss_pred EEecCCcCCCCCeEEeeccCcc-cCcchhHHHHHhcC-CCeE-Eeeccccccce----------eeeCc-----HHHHHH
Confidence 5666788778889999999876 44444 3666664 3333 33355543322 22211 111223
Q ss_pred HHHHHHHHHHHhccCC-CCceEEEEEechhHHHHHHHHHhc
Q 025145 102 LDASAAHIANLLSTEP-ADVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
+ .+.+.+.++... ....++|-|.|||.+-|+.+++..
T Consensus 341 I---~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l 378 (511)
T TIGR03712 341 I---INVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKL 378 (511)
T ss_pred H---HHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccC
Confidence 3 333344444433 234899999999999999999853
No 202
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.50 E-value=0.14 Score=39.16 Aligned_cols=52 Identities=13% Similarity=0.153 Sum_probs=38.2
Q ss_pred EEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC----HHHH-HHHHHHHHH
Q 025145 191 ILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV----PKEM-DEVCNWLTA 248 (257)
Q Consensus 191 ~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~----~~~~-~~~~~~l~~ 248 (257)
++++.+++|..+|......+.+..+ ++++..++ +||-.. .+.+ ..|.+-|++
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WP-----g~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R 365 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWP-----GCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDR 365 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCC-----CCEEEEee-cCceeeeehhchHHHHHHHHHHHh
Confidence 6788899999999988888888877 67888888 499532 3333 556666654
No 203
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.46 E-value=0.0057 Score=46.44 Aligned_cols=23 Identities=35% Similarity=0.361 Sum_probs=20.1
Q ss_pred CceEEEEEechhHHHHHHHHHhc
Q 025145 119 DVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 119 ~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
..++.++|||+||.+|..++...
T Consensus 127 ~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 127 DYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred CceEEEEccCHHHHHHHHHHHHH
Confidence 34999999999999999988853
No 204
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.40 E-value=0.0064 Score=51.65 Aligned_cols=22 Identities=27% Similarity=0.090 Sum_probs=19.5
Q ss_pred CceEEEEEechhHHHHHHHHHh
Q 025145 119 DVKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 119 ~~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
..|++|+||||||.+++.++..
T Consensus 212 gkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 212 GKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred CCeEEEEEeCCchHHHHHHHHh
Confidence 3599999999999999998874
No 205
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=96.27 E-value=0.009 Score=49.06 Aligned_cols=23 Identities=30% Similarity=0.270 Sum_probs=20.6
Q ss_pred ceEEEEEechhHHHHHHHHHhcc
Q 025145 120 VKVGIGGFSMGAAVALYSATCCA 142 (257)
Q Consensus 120 ~~i~l~G~S~Gg~~a~~~~~~~~ 142 (257)
+|++|++||||+.+.+.++.+..
T Consensus 182 kkVvlisHSMG~l~~lyFl~w~~ 204 (473)
T KOG2369|consen 182 KKVVLISHSMGGLYVLYFLKWVE 204 (473)
T ss_pred CceEEEecCCccHHHHHHHhccc
Confidence 59999999999999999988654
No 206
>PLN02162 triacylglycerol lipase
Probab=96.01 E-value=0.013 Score=48.34 Aligned_cols=37 Identities=19% Similarity=0.233 Sum_probs=26.6
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHh
Q 025145 103 DASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
.+..+.+.+++.+.. ..++.++|||+||.+|..++..
T Consensus 262 ~~I~~~L~~lL~k~p-~~kliVTGHSLGGALAtLaAa~ 298 (475)
T PLN02162 262 YTIRQMLRDKLARNK-NLKYILTGHSLGGALAALFPAI 298 (475)
T ss_pred HHHHHHHHHHHHhCC-CceEEEEecChHHHHHHHHHHH
Confidence 344455555665543 3499999999999999998763
No 207
>PLN00413 triacylglycerol lipase
Probab=95.97 E-value=0.014 Score=48.30 Aligned_cols=36 Identities=22% Similarity=0.441 Sum_probs=26.9
Q ss_pred HHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHh
Q 025145 104 ASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
+....+.+++++.. ..++.++|||+||.+|...+..
T Consensus 269 ~i~~~Lk~ll~~~p-~~kliVTGHSLGGALAtLaA~~ 304 (479)
T PLN00413 269 TILRHLKEIFDQNP-TSKFILSGHSLGGALAILFTAV 304 (479)
T ss_pred HHHHHHHHHHHHCC-CCeEEEEecCHHHHHHHHHHHH
Confidence 44556666665543 3489999999999999998863
No 208
>PLN02310 triacylglycerol lipase
Probab=95.95 E-value=0.015 Score=47.41 Aligned_cols=36 Identities=25% Similarity=0.355 Sum_probs=24.9
Q ss_pred HHHHHHHHhccC---CCCceEEEEEechhHHHHHHHHHh
Q 025145 105 SAAHIANLLSTE---PADVKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 105 ~~~~~~~~~~~~---~~~~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
....+..+++.. ....+|.++|||+||.+|...+..
T Consensus 191 Vl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 191 VMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 344444444432 223489999999999999998864
No 209
>PLN02571 triacylglycerol lipase
Probab=95.95 E-value=0.012 Score=48.02 Aligned_cols=39 Identities=26% Similarity=0.373 Sum_probs=27.9
Q ss_pred HHHHHHHHHHhccCCCC-ceEEEEEechhHHHHHHHHHhc
Q 025145 103 DASAAHIANLLSTEPAD-VKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~~-~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
.+....+..+++..... .+|.++|||+||.+|...|...
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~dl 247 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVDI 247 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHHH
Confidence 44555666666544332 2799999999999999998753
No 210
>PLN02454 triacylglycerol lipase
Probab=95.94 E-value=0.013 Score=47.77 Aligned_cols=37 Identities=27% Similarity=0.336 Sum_probs=25.6
Q ss_pred HHHHHHHHHhccCCCC-ceEEEEEechhHHHHHHHHHh
Q 025145 104 ASAAHIANLLSTEPAD-VKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~~-~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
+....+..+++..... .+|.++|||+||.+|+..|..
T Consensus 211 qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 211 QLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 3444455555443322 259999999999999999874
No 211
>PLN02934 triacylglycerol lipase
Probab=95.87 E-value=0.015 Score=48.54 Aligned_cols=37 Identities=27% Similarity=0.389 Sum_probs=27.5
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHh
Q 025145 103 DASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
.+....+.+++++.. ..++++.|||+||.+|..++..
T Consensus 305 ~~v~~~lk~ll~~~p-~~kIvVTGHSLGGALAtLaA~~ 341 (515)
T PLN02934 305 YAVRSKLKSLLKEHK-NAKFVVTGHSLGGALAILFPTV 341 (515)
T ss_pred HHHHHHHHHHHHHCC-CCeEEEeccccHHHHHHHHHHH
Confidence 345555666665543 3499999999999999999863
No 212
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.87 E-value=0.031 Score=40.61 Aligned_cols=87 Identities=17% Similarity=0.043 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchH
Q 025145 102 LDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHE 181 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 181 (257)
.......+.+....- ++.+++|+|+|+|+.++..++...+. .....++|.++++++-+......- ..
T Consensus 64 ~~~~~~~i~~~~~~C-P~~kivl~GYSQGA~V~~~~~~~~~l-----~~~~~~~I~avvlfGdP~~~~~~~-~~------ 130 (179)
T PF01083_consen 64 VANLVRLIEEYAARC-PNTKIVLAGYSQGAMVVGDALSGDGL-----PPDVADRIAAVVLFGDPRRGAGQP-GI------ 130 (179)
T ss_dssp HHHHHHHHHHHHHHS-TTSEEEEEEETHHHHHHHHHHHHTTS-----SHHHHHHEEEEEEES-TTTBTTTT-TB------
T ss_pred HHHHHHHHHHHHHhC-CCCCEEEEecccccHHHHHHHHhccC-----ChhhhhhEEEEEEecCCcccCCcc-cc------
Confidence 344444444444443 34499999999999999999875100 012357788988887543321111 00
Q ss_pred HHhhhcCCCEEEEccCCCCccc
Q 025145 182 AARRAASLPILLTHGLCDDVVP 203 (257)
Q Consensus 182 ~~~~~~~~P~l~~~G~~D~~v~ 203 (257)
.......++-++-..|.++.
T Consensus 131 --~~~~~~~~~~~C~~gD~vC~ 150 (179)
T PF01083_consen 131 --PGDYSDRVRSYCNPGDPVCD 150 (179)
T ss_dssp --TCSCGGGEEEE-BTT-GGGG
T ss_pred --CcccccceeEEcCCCCcccC
Confidence 01112347788888888874
No 213
>PLN02408 phospholipase A1
Probab=95.85 E-value=0.016 Score=46.74 Aligned_cols=38 Identities=32% Similarity=0.366 Sum_probs=27.0
Q ss_pred HHHHHHHHHhccCCCC-ceEEEEEechhHHHHHHHHHhc
Q 025145 104 ASAAHIANLLSTEPAD-VKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~~-~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
+..+.+.++++..... .+|.++|||+||.+|...+...
T Consensus 183 qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 183 MVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 3445555666554332 3699999999999999998853
No 214
>PLN03037 lipase class 3 family protein; Provisional
Probab=95.65 E-value=0.022 Score=47.67 Aligned_cols=21 Identities=43% Similarity=0.551 Sum_probs=18.9
Q ss_pred ceEEEEEechhHHHHHHHHHh
Q 025145 120 VKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 120 ~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
.+|.|+|||+||.+|+..|..
T Consensus 318 ~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHH
Confidence 489999999999999999864
No 215
>PLN02324 triacylglycerol lipase
Probab=95.65 E-value=0.02 Score=46.83 Aligned_cols=38 Identities=21% Similarity=0.379 Sum_probs=27.3
Q ss_pred HHHHHHHHHHhccCCCC-ceEEEEEechhHHHHHHHHHh
Q 025145 103 DASAAHIANLLSTEPAD-VKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~~-~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
.+....+.++++..... .+|.++|||+||.+|.+.|..
T Consensus 197 eqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 197 EQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 34455566666554332 379999999999999999874
No 216
>PLN02802 triacylglycerol lipase
Probab=95.34 E-value=0.029 Score=46.88 Aligned_cols=37 Identities=24% Similarity=0.395 Sum_probs=26.1
Q ss_pred HHHHHHHHhccCCCC-ceEEEEEechhHHHHHHHHHhc
Q 025145 105 SAAHIANLLSTEPAD-VKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 105 ~~~~~~~~~~~~~~~-~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
....+.++++..... .+|.++|||+||.+|...+...
T Consensus 314 Vl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 314 VVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 344555555544322 3799999999999999988743
No 217
>PLN02753 triacylglycerol lipase
Probab=95.25 E-value=0.032 Score=46.89 Aligned_cols=38 Identities=24% Similarity=0.405 Sum_probs=26.9
Q ss_pred HHHHHHHHHHhccCCC----CceEEEEEechhHHHHHHHHHh
Q 025145 103 DASAAHIANLLSTEPA----DVKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~----~~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
.+....+..++++... ..+|.++|||+||.+|...|..
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 3445555555554321 3499999999999999999874
No 218
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=95.00 E-value=0.14 Score=47.39 Aligned_cols=98 Identities=14% Similarity=0.194 Sum_probs=67.5
Q ss_pred CCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHH
Q 025145 31 GKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIA 110 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (257)
....|+++|+|-+-+.......++..|.-.-| ... . ....+..++.+.+++..
T Consensus 2120 ~se~~~~Ffv~pIEG~tt~l~~la~rle~PaY---glQ---------------------~---T~~vP~dSies~A~~yi 2172 (2376)
T KOG1202|consen 2120 QSEEPPLFFVHPIEGFTTALESLASRLEIPAY---GLQ---------------------C---TEAVPLDSIESLAAYYI 2172 (2376)
T ss_pred cccCCceEEEeccccchHHHHHHHhhcCCcch---hhh---------------------c---cccCCcchHHHHHHHHH
Confidence 34678999999999998888888888862222 111 0 11223456677777777
Q ss_pred HHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEecc
Q 025145 111 NLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSG 164 (257)
Q Consensus 111 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 164 (257)
+-+++..+..+.-++|+|+|+.++..++....+ .+....+|.+.|
T Consensus 2173 rqirkvQP~GPYrl~GYSyG~~l~f~ma~~Lqe---------~~~~~~lillDG 2217 (2376)
T KOG1202|consen 2173 RQIRKVQPEGPYRLAGYSYGACLAFEMASQLQE---------QQSPAPLILLDG 2217 (2376)
T ss_pred HHHHhcCCCCCeeeeccchhHHHHHHHHHHHHh---------hcCCCcEEEecC
Confidence 777776666699999999999999999986522 233444777765
No 219
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=94.82 E-value=0.13 Score=41.96 Aligned_cols=106 Identities=15% Similarity=0.060 Sum_probs=58.4
Q ss_pred CCCCceEEEEEccCCCCccch-HHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHH
Q 025145 30 KGKHQATIVWLHGLGDNGSSW-SQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAH 108 (257)
Q Consensus 30 ~~~~~~~vi~~HG~~~~~~~~-~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 108 (257)
.+...|+|++.-|++-..... ....+.|. -+-+.+.+|.-+.+.... ..| ...+..+..++...
T Consensus 59 k~~drPtV~~T~GY~~~~~p~r~Ept~Lld---~NQl~vEhRfF~~SrP~p---~DW---------~~Lti~QAA~D~Hr 123 (448)
T PF05576_consen 59 KDFDRPTVLYTEGYNVSTSPRRSEPTQLLD---GNQLSVEHRFFGPSRPEP---ADW---------SYLTIWQAASDQHR 123 (448)
T ss_pred cCCCCCeEEEecCcccccCccccchhHhhc---cceEEEEEeeccCCCCCC---CCc---------ccccHhHhhHHHHH
Confidence 344568888888887654332 23444443 233344444321111111 112 11234444555555
Q ss_pred HHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEe
Q 025145 109 IANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGL 162 (257)
Q Consensus 109 ~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 162 (257)
+...++..... +-+-.|.|-||..++..=. -||+.+.+.|..
T Consensus 124 i~~A~K~iY~~-kWISTG~SKGGmTa~y~rr-----------FyP~DVD~tVaY 165 (448)
T PF05576_consen 124 IVQAFKPIYPG-KWISTGGSKGGMTAVYYRR-----------FYPDDVDGTVAY 165 (448)
T ss_pred HHHHHHhhccC-CceecCcCCCceeEEEEee-----------eCCCCCCeeeee
Confidence 66666666655 7889999999998887643 346666666643
No 220
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=94.82 E-value=0.09 Score=42.25 Aligned_cols=73 Identities=23% Similarity=0.191 Sum_probs=49.9
Q ss_pred CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHHhhhcCCCEEEEccCC
Q 025145 119 DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLC 198 (257)
Q Consensus 119 ~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~G~~ 198 (257)
..+|.|+|||+|+.+....+...... .....+..+++++++.+........+ .....-.+.-++.++
T Consensus 219 ~RpVtLvG~SLGarvI~~cL~~L~~~------~~~~lVe~VvL~Gapv~~~~~~W~~~-------r~vVsGr~vN~YS~~ 285 (345)
T PF05277_consen 219 ERPVTLVGHSLGARVIYYCLLELAER------KAFGLVENVVLMGAPVPSDPEEWRKI-------RSVVSGRLVNVYSEN 285 (345)
T ss_pred CCceEEEeecccHHHHHHHHHHHHhc------cccCeEeeEEEecCCCCCCHHHHHHH-------HHHccCeEEEEecCc
Confidence 34899999999999999988754221 11334788888887776543322211 234577889999999
Q ss_pred CCcccc
Q 025145 199 DDVVPY 204 (257)
Q Consensus 199 D~~v~~ 204 (257)
|.+..+
T Consensus 286 D~vL~~ 291 (345)
T PF05277_consen 286 DWVLGF 291 (345)
T ss_pred HHHHHH
Confidence 987543
No 221
>PLN02761 lipase class 3 family protein
Probab=94.62 E-value=0.059 Score=45.30 Aligned_cols=37 Identities=27% Similarity=0.366 Sum_probs=25.8
Q ss_pred HHHHHHHHHhccCC-----CCceEEEEEechhHHHHHHHHHh
Q 025145 104 ASAAHIANLLSTEP-----ADVKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 104 ~~~~~~~~~~~~~~-----~~~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
+....+..+++... ...+|.++|||+||.+|...|..
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 34455555554331 22389999999999999999864
No 222
>PLN02719 triacylglycerol lipase
Probab=94.62 E-value=0.059 Score=45.21 Aligned_cols=39 Identities=21% Similarity=0.348 Sum_probs=27.0
Q ss_pred HHHHHHHHHHhccCCC----CceEEEEEechhHHHHHHHHHhc
Q 025145 103 DASAAHIANLLSTEPA----DVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~----~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
.+....+.++++.... ..+|.++|||+||.+|...|...
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl 319 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDV 319 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHH
Confidence 3344555555554321 23899999999999999988743
No 223
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=94.58 E-value=0.088 Score=44.57 Aligned_cols=63 Identities=14% Similarity=0.212 Sum_probs=50.8
Q ss_pred cCCCEEEEccCCCCcccchhhHHHHHHhhhcCc-------eeeEEEEecCCCCccC------HHHHHHHHHHHHHh
Q 025145 187 ASLPILLTHGLCDDVVPYKYGEKSANCLSISGF-------RHLTFKSFEGLGHYTV------PKEMDEVCNWLTAR 249 (257)
Q Consensus 187 ~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~-------~~~~~~~~~g~~H~~~------~~~~~~~~~~l~~~ 249 (257)
..-.+++.||..|.+||+.....+++++.+.-. .-.++..+||++|-.- .+.+..+.+|+.+-
T Consensus 352 ~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G 427 (474)
T PF07519_consen 352 RGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENG 427 (474)
T ss_pred cCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCC
Confidence 357899999999999999999999988876421 2368999999999532 56788999999764
No 224
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=94.50 E-value=0.04 Score=32.27 Aligned_cols=20 Identities=25% Similarity=0.639 Sum_probs=11.8
Q ss_pred CCCceEEEEEccCCCCccch
Q 025145 31 GKHQATIVWLHGLGDNGSSW 50 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~ 50 (257)
..++|+|++.||+.+++..|
T Consensus 40 ~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 40 NKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp TTT--EEEEE--TT--GGGG
T ss_pred CCCCCcEEEECCcccChHHH
Confidence 35788999999999999887
No 225
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=94.41 E-value=0.079 Score=42.93 Aligned_cols=28 Identities=25% Similarity=0.484 Sum_probs=20.0
Q ss_pred CCCceEEEEEccCCC-CccchHHHhhcCC
Q 025145 31 GKHQATIVWLHGLGD-NGSSWSQLLESLP 58 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~-~~~~~~~~~~~l~ 58 (257)
.++...|++.||+.+ +...|...+....
T Consensus 77 ~k~~HLvVlthGi~~~~~~~~~~~~~~~~ 105 (405)
T KOG4372|consen 77 TKPKHLVVLTHGLHGADMEYWKEKIEQMT 105 (405)
T ss_pred cCCceEEEeccccccccHHHHHHHHHhhh
Confidence 345679999999887 5666766665554
No 226
>PLN02847 triacylglycerol lipase
Probab=94.39 E-value=0.077 Score=45.34 Aligned_cols=22 Identities=27% Similarity=0.309 Sum_probs=19.4
Q ss_pred ceEEEEEechhHHHHHHHHHhc
Q 025145 120 VKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 120 ~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
-+++++|||+||.+|..++...
T Consensus 251 YkLVITGHSLGGGVAALLAilL 272 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYIL 272 (633)
T ss_pred CeEEEeccChHHHHHHHHHHHH
Confidence 3999999999999999988753
No 227
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=94.27 E-value=0.092 Score=40.46 Aligned_cols=37 Identities=22% Similarity=0.255 Sum_probs=28.1
Q ss_pred HHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhc
Q 025145 105 SAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 105 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
++-++...+++...+.+|.|.|||+||.+|.++..+.
T Consensus 261 a~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 261 AALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred HHHHHHHHHHHhCCCceEEEeccccchHHHHHhcccc
Confidence 3444455556666667999999999999999998753
No 228
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=94.27 E-value=0.092 Score=40.46 Aligned_cols=37 Identities=22% Similarity=0.255 Sum_probs=28.1
Q ss_pred HHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhc
Q 025145 105 SAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 105 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
++-++...+++...+.+|.|.|||+||.+|.++..+.
T Consensus 261 a~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 261 AALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred HHHHHHHHHHHhCCCceEEEeccccchHHHHHhcccc
Confidence 3444455556666667999999999999999998753
No 229
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=94.24 E-value=0.33 Score=40.70 Aligned_cols=97 Identities=22% Similarity=0.191 Sum_probs=51.4
Q ss_pred CceEEEEEccCCCCccchHHHhhcCC------------------CCceEEEccCCCCCCcccCCCCcccccccCCCCCCC
Q 025145 33 HQATIVWLHGLGDNGSSWSQLLESLP------------------LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDD 94 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~------------------~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~ 94 (257)
+.|+++++.|..+++..+..+.+.-- ...-.++.+|+|- ..| |+.. ....
T Consensus 100 ~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPv-----GTG------fS~a-~~~e 167 (498)
T COG2939 100 NRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPV-----GTG------FSRA-LGDE 167 (498)
T ss_pred CCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCc-----ccC------cccc-cccc
Confidence 58999999999999887765433210 0112444455331 111 1111 1111
Q ss_pred CCCchhhHHHHHHHHH----HHhccC-CCCceEEEEEechhHHHHHHHHHhc
Q 025145 95 GPEDWEGLDASAAHIA----NLLSTE-PADVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 95 ~~~~~~~~~~~~~~~~----~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
...+...+.+++..+. +.+.+. ....+.+|+|.|+||+-+..+|...
T Consensus 168 ~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L 219 (498)
T COG2939 168 KKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHEL 219 (498)
T ss_pred cccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHH
Confidence 2222333333333333 333222 1123899999999999888888743
No 230
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=93.94 E-value=0.087 Score=44.71 Aligned_cols=63 Identities=17% Similarity=0.105 Sum_probs=46.9
Q ss_pred CCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC------HH---HHHHHHHHHHHhcCcC
Q 025145 188 SLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV------PK---EMDEVCNWLTARLGLE 253 (257)
Q Consensus 188 ~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~------~~---~~~~~~~~l~~~l~~~ 253 (257)
-.|+.|+...-|+.. +....++.+++..|. .+++.++++.-|.+. +| .-+.-++-|+..|...
T Consensus 787 LPp~~i~ac~mDP~L--DD~vmfA~kLr~lG~-~v~l~vle~lPHGFLnft~ls~E~~~~~~~CI~rl~~~L~~~ 858 (880)
T KOG4388|consen 787 LPPVHIVACAMDPML--DDSVMFARKLRNLGQ-PVTLRVLEDLPHGFLNFTALSRETRQAAELCIERLRLVLTPP 858 (880)
T ss_pred CCCceEEEeccCcch--hHHHHHHHHHHhcCC-ceeehhhhcCCccceeHHhhCHHHHHHHHHHHHHHHHHhCCC
Confidence 367999999999884 457779999999885 899999999999876 22 3345556666665543
No 231
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=93.66 E-value=1 Score=32.59 Aligned_cols=63 Identities=14% Similarity=0.084 Sum_probs=40.8
Q ss_pred CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEecc-CCCCchhhhhccccchHHHhhhcCCCEEEEccC
Q 025145 119 DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSG-WLPGSRNLRNKIEGSHEAARRAASLPILLTHGL 197 (257)
Q Consensus 119 ~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~G~ 197 (257)
..++.++|||+|+.++-..+... ...+..++++.. -+.... . .........++...+.
T Consensus 108 ~~~~tv~GHSYGS~v~G~A~~~~-----------~~~vddvv~~GSPG~g~~~-a---------~~l~~~~~~v~a~~a~ 166 (177)
T PF06259_consen 108 DAHLTVVGHSYGSTVVGLAAQQG-----------GLRVDDVVLVGSPGMGVDS-A---------SDLGVPPGHVYAMTAP 166 (177)
T ss_pred CCCEEEEEecchhHHHHHHhhhC-----------CCCcccEEEECCCCCCCCC-H---------HHcCCCCCcEEEeeCC
Confidence 34999999999999999998742 456777776643 332211 0 1112223568888888
Q ss_pred CCCcc
Q 025145 198 CDDVV 202 (257)
Q Consensus 198 ~D~~v 202 (257)
.|.+-
T Consensus 167 ~D~I~ 171 (177)
T PF06259_consen 167 GDPIA 171 (177)
T ss_pred CCCcc
Confidence 88764
No 232
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=93.51 E-value=0.13 Score=41.55 Aligned_cols=22 Identities=27% Similarity=0.315 Sum_probs=19.7
Q ss_pred ceEEEEEechhHHHHHHHHHhc
Q 025145 120 VKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 120 ~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
-+|.+.|||+||.+|...|...
T Consensus 171 ~~i~vTGHSLGgAlA~laa~~i 192 (336)
T KOG4569|consen 171 YSIWVTGHSLGGALASLAALDL 192 (336)
T ss_pred cEEEEecCChHHHHHHHHHHHH
Confidence 3999999999999999998854
No 233
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=92.99 E-value=0.57 Score=35.44 Aligned_cols=44 Identities=25% Similarity=0.178 Sum_probs=32.1
Q ss_pred hhhHHHHHHHHHHHhccCC-CCceEEEEEechhHHHHHHHHHhcc
Q 025145 99 WEGLDASAAHIANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCA 142 (257)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~ 142 (257)
..++.+-++.+.+.+.... ..++++++|+|+|+.++...+.+..
T Consensus 26 ~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~ 70 (225)
T PF08237_consen 26 DESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLA 70 (225)
T ss_pred chHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHH
Confidence 3455666666666665532 3459999999999999999988753
No 234
>PF03283 PAE: Pectinacetylesterase
Probab=92.49 E-value=4.8 Score=32.97 Aligned_cols=23 Identities=26% Similarity=0.244 Sum_probs=19.3
Q ss_pred CCceEEEEEechhHHHHHHHHHh
Q 025145 118 ADVKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 118 ~~~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
..++++|.|.|.||..++..+-.
T Consensus 154 ~a~~vlltG~SAGG~g~~~~~d~ 176 (361)
T PF03283_consen 154 NAKQVLLTGCSAGGLGAILHADY 176 (361)
T ss_pred ccceEEEeccChHHHHHHHHHHH
Confidence 34699999999999999987654
No 235
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=92.44 E-value=1.1 Score=35.88 Aligned_cols=64 Identities=20% Similarity=0.256 Sum_probs=48.1
Q ss_pred CCCEEEEccCCCCcccchhhHHHHHHhhhc---------------Cc----ee-eEEEEecCCCCccCHHHHHHHHHHHH
Q 025145 188 SLPILLTHGLCDDVVPYKYGEKSANCLSIS---------------GF----RH-LTFKSFEGLGHYTVPKEMDEVCNWLT 247 (257)
Q Consensus 188 ~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~---------------~~----~~-~~~~~~~g~~H~~~~~~~~~~~~~l~ 247 (257)
.++||+..|+.|-+|+.-..+.+.+.|.-. |. .+ .++..+.++||.+. ..++...+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 479999999999999998888888888621 11 12 77888889999985 46666666666
Q ss_pred HhcCc
Q 025145 248 ARLGL 252 (257)
Q Consensus 248 ~~l~~ 252 (257)
+++..
T Consensus 312 ~fi~~ 316 (319)
T PLN02213 312 RWISG 316 (319)
T ss_pred HHHcC
Confidence 66543
No 236
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=92.41 E-value=0.24 Score=36.05 Aligned_cols=63 Identities=13% Similarity=0.132 Sum_probs=44.3
Q ss_pred hcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC-------HHHHHHHHHHHHH
Q 025145 186 AASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV-------PKEMDEVCNWLTA 248 (257)
Q Consensus 186 ~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-------~~~~~~~~~~l~~ 248 (257)
..+++++-|=|+.|.++...+.....+.+..........++.+|+||.-. .+....+.+||.+
T Consensus 132 I~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 132 IRRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred cccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 35788999999999999987765555544432222557888899999743 4556777777764
No 237
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=91.98 E-value=0.59 Score=37.51 Aligned_cols=43 Identities=12% Similarity=0.053 Sum_probs=30.7
Q ss_pred hhhHHHHHHHHHHHhccCC--CCceEEEEEechhHHHHHHHHHhc
Q 025145 99 WEGLDASAAHIANLLSTEP--ADVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
.....+....|..+++... ...+++|.|.|+||.-+-.++...
T Consensus 28 ~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I 72 (319)
T PLN02213 28 ISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEI 72 (319)
T ss_pred HHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHH
Confidence 3444666777777775542 345899999999999888777653
No 238
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=90.28 E-value=8.1 Score=30.86 Aligned_cols=60 Identities=15% Similarity=0.105 Sum_probs=39.6
Q ss_pred hcCCCEEEEccCCCCcccchhhHHHHHHhhhcCc------------------------eeeEEEEecCCCCccCHHHHHH
Q 025145 186 AASLPILLTHGLCDDVVPYKYGEKSANCLSISGF------------------------RHLTFKSFEGLGHYTVPKEMDE 241 (257)
Q Consensus 186 ~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~------------------------~~~~~~~~~g~~H~~~~~~~~~ 241 (257)
...+.|.+..|..|-+|.....+...+++.-... ++..+..++-+||.+..+..+.
T Consensus 323 ~~Gv~V~VynG~lDlIc~T~G~~AWv~~l~w~~~p~f~~~~r~~~~~s~~l~gy~ktyknl~f~wilraghmvp~Dnp~~ 402 (414)
T KOG1283|consen 323 NNGVNVTVYNGQLDLICATMGTEAWVEKLEWSAKPSFQVSPRVGITVSRVLEGYEKTYKNLSFFWILRAGHMVPADNPAA 402 (414)
T ss_pred hCCceEEEEecccchhhcccchhhhhhheecCCCCccccceeeeccceeecchhhhhhccceeEEeecccCcccCCCHHH
Confidence 3457888999999988887776666666542111 2456667777888877665555
Q ss_pred HHHH
Q 025145 242 VCNW 245 (257)
Q Consensus 242 ~~~~ 245 (257)
+..-
T Consensus 403 a~hm 406 (414)
T KOG1283|consen 403 ASHM 406 (414)
T ss_pred Hhhh
Confidence 4443
No 239
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.19 E-value=1.6 Score=37.55 Aligned_cols=39 Identities=23% Similarity=0.151 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHhcc-CCC-CceEEEEEechhHHHHHHHHHh
Q 025145 102 LDASAAHIANLLST-EPA-DVKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 102 ~~~~~~~~~~~~~~-~~~-~~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
++.-...+.+.+.+ ... +.+|+.+||||||.++=.++..
T Consensus 506 l~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLld 546 (697)
T KOG2029|consen 506 LAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLD 546 (697)
T ss_pred HHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHH
Confidence 33333344444433 333 4589999999999888777764
No 240
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=89.83 E-value=2.7 Score=35.43 Aligned_cols=93 Identities=16% Similarity=0.115 Sum_probs=51.0
Q ss_pred ceEEEEEccCCC---CccchHHHhhcCC-CCceEEEccCCCCCCcccCCCCcccccccC-CCCCCCCCCchhhHHHHHHH
Q 025145 34 QATIVWLHGLGD---NGSSWSQLLESLP-LPNIKWICPTAPTRPVAILGGFPCTAWFDV-GELSDDGPEDWEGLDASAAH 108 (257)
Q Consensus 34 ~~~vi~~HG~~~---~~~~~~~~~~~l~-~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~-~~~~~~~~~~~~~~~~~~~~ 108 (257)
.-++|++-|.|- ++.---.-.+.|+ ..+..|+.+++|--.++. ... +..+.+.....-+...++.+
T Consensus 135 ~tVlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG~FGF---------L~l~~~~eaPGNmGl~DQqLAl~W 205 (601)
T KOG4389|consen 135 LTVLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVGAFGF---------LYLPGHPEAPGNMGLLDQQLALQW 205 (601)
T ss_pred ceEEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeeccceE---------EecCCCCCCCCccchHHHHHHHHH
Confidence 348899999663 2222112235555 346677777765322211 111 11222223334444556677
Q ss_pred HHHHhccCC-CCceEEEEEechhHHHHH
Q 025145 109 IANLLSTEP-ADVKVGIGGFSMGAAVAL 135 (257)
Q Consensus 109 ~~~~~~~~~-~~~~i~l~G~S~Gg~~a~ 135 (257)
+.+.+.... ++.+|.|+|.|.|+.-..
T Consensus 206 V~~Ni~aFGGnp~~vTLFGESAGaASv~ 233 (601)
T KOG4389|consen 206 VQENIAAFGGNPSRVTLFGESAGAASVV 233 (601)
T ss_pred HHHhHHHhCCCcceEEEeccccchhhhh
Confidence 777776653 446999999999986443
No 241
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=89.01 E-value=1.1 Score=38.63 Aligned_cols=48 Identities=19% Similarity=0.341 Sum_probs=35.9
Q ss_pred hcCCCEEEEccCCCCcccchhhHHHHHHhhh-c-Cc-eeeEEEEecCCCCc
Q 025145 186 AASLPILLTHGLCDDVVPYKYGEKSANCLSI-S-GF-RHLTFKSFEGLGHY 233 (257)
Q Consensus 186 ~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~-~-~~-~~~~~~~~~g~~H~ 233 (257)
...+|++++||..|.++|..+..+-+-.+.. . +. ...+++++.++.|+
T Consensus 553 L~GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHf 603 (690)
T PF10605_consen 553 LHGKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHF 603 (690)
T ss_pred cCCCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeec
Confidence 3478999999999999999877555555443 2 22 36789999988885
No 242
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=88.93 E-value=0.63 Score=30.88 Aligned_cols=26 Identities=19% Similarity=0.308 Sum_probs=13.9
Q ss_pred CCCCCCceEEEEEccCCCCccchHHH
Q 025145 28 RPKGKHQATIVWLHGLGDNGSSWSQL 53 (257)
Q Consensus 28 ~~~~~~~~~vi~~HG~~~~~~~~~~~ 53 (257)
.+.++...+||++||+.++--.|..+
T Consensus 86 rs~~~~aiPLll~HGWPgSf~Ef~~v 111 (112)
T PF06441_consen 86 RSKRPNAIPLLLLHGWPGSFLEFLKV 111 (112)
T ss_dssp --S-TT-EEEEEE--SS--GGGGHHH
T ss_pred eCCCCCCeEEEEECCCCccHHhHHhh
Confidence 44455566999999999998877654
No 243
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=88.37 E-value=1.8 Score=36.37 Aligned_cols=111 Identities=14% Similarity=0.040 Sum_probs=67.2
Q ss_pred CCCceEEEEEccCCCCccch--------HHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhH
Q 025145 31 GKHQATIVWLHGLGDNGSSW--------SQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGL 102 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~--------~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~ 102 (257)
.+..|+.|+|-|=|.....| ..+++. .|..|+..++|.-|.+..-+ ..+. .....-+.
T Consensus 83 ~~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~Akk---fgA~v~~lEHRFYG~S~P~~----------~~st-~nlk~LSs 148 (514)
T KOG2182|consen 83 KPGGPIFLMIGGEGPESDKWVGNENLTWLQWAKK---FGATVFQLEHRFYGQSSPIG----------DLST-SNLKYLSS 148 (514)
T ss_pred cCCCceEEEEcCCCCCCCCccccCcchHHHHHHH---hCCeeEEeeeeccccCCCCC----------CCcc-cchhhhhH
Confidence 35567788887755444333 334444 47889999988655432211 1111 11223334
Q ss_pred HHHHHHHHHHhccC---C---CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCC
Q 025145 103 DASAAHIANLLSTE---P---ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWL 166 (257)
Q Consensus 103 ~~~~~~~~~~~~~~---~---~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 166 (257)
.+++.++..+++.. . .+.+.+.+|-|+-|.++..+=. .||+.+.+.++-|+.+
T Consensus 149 ~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~-----------~yPel~~GsvASSapv 207 (514)
T KOG2182|consen 149 LQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFRE-----------KYPELTVGSVASSAPV 207 (514)
T ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHH-----------hCchhheeecccccce
Confidence 45555555555432 1 1238999999999999988766 5799999988877754
No 244
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=84.07 E-value=1.9 Score=30.46 Aligned_cols=19 Identities=26% Similarity=0.263 Sum_probs=17.4
Q ss_pred eEEEEEechhHHHHHHHHH
Q 025145 121 KVGIGGFSMGAAVALYSAT 139 (257)
Q Consensus 121 ~i~l~G~S~Gg~~a~~~~~ 139 (257)
.+.|+.+|||-++|-+++.
T Consensus 58 hirlvAwSMGVwvAeR~lq 76 (214)
T COG2830 58 HIRLVAWSMGVWVAERVLQ 76 (214)
T ss_pred hhhhhhhhHHHHHHHHHHh
Confidence 6789999999999999987
No 245
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=84.06 E-value=19 Score=28.47 Aligned_cols=62 Identities=11% Similarity=0.146 Sum_probs=42.9
Q ss_pred CCCEEEEccCCCCcccchhh---HHHHHHhhhcCceeeEEEEecCCCCccC-------HHHHHHHHHHHHHhcCc
Q 025145 188 SLPILLTHGLCDDVVPYKYG---EKSANCLSISGFRHLTFKSFEGLGHYTV-------PKEMDEVCNWLTARLGL 252 (257)
Q Consensus 188 ~~P~l~~~G~~D~~v~~~~~---~~~~~~l~~~~~~~~~~~~~~g~~H~~~-------~~~~~~~~~~l~~~l~~ 252 (257)
++-++-+-|+.|.+--..+. ..++..+++. ..+...-|+.||.-. .+...++.+|+.+.-+.
T Consensus 339 ~~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~---mk~hy~qp~vGHYGVFnGsrfr~eIvPri~dFI~~~d~~ 410 (415)
T COG4553 339 NVALFTVEGENDDISGVGQTKAAHDLCSNIPED---MKQHYMQPDVGHYGVFNGSRFREEIVPRIRDFIRRYDRS 410 (415)
T ss_pred ceeEEEeecccccccccchhHHHHHHHhcChHH---HHHHhcCCCCCccceeccchHHHHHHHHHHHHHHHhCcc
Confidence 56788889999998765544 4444444443 346778899999643 45668889999886543
No 246
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=78.37 E-value=4.8 Score=31.64 Aligned_cols=29 Identities=28% Similarity=0.166 Sum_probs=22.3
Q ss_pred HhccCCCCceEEEEEechhHHHHHHHHHh
Q 025145 112 LLSTEPADVKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
+.+.....++|.++|+|-|+++|-.++..
T Consensus 84 l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 84 LSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred HHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 33444444599999999999999888864
No 247
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=78.18 E-value=8.2 Score=28.05 Aligned_cols=38 Identities=21% Similarity=0.351 Sum_probs=29.9
Q ss_pred CCceEEEEEccCCCCccch--HHHhhcCCCCceEEEccCC
Q 025145 32 KHQATIVWLHGLGDNGSSW--SQLLESLPLPNIKWICPTA 69 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~--~~~~~~l~~~g~~v~~~d~ 69 (257)
..++.+||+-|..++...- ..+.+.|...|+.++..|.
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDG 59 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDG 59 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecC
Confidence 4567999999998887653 3466777779999999993
No 248
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=77.18 E-value=5 Score=34.25 Aligned_cols=36 Identities=17% Similarity=0.164 Sum_probs=32.1
Q ss_pred ceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCC
Q 025145 120 VKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWL 166 (257)
Q Consensus 120 ~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 166 (257)
.+-+..|.|-||.-++..|.| ||+.+.++++-+|.+
T Consensus 115 ~~sY~~GcS~GGRqgl~~AQr-----------yP~dfDGIlAgaPA~ 150 (474)
T PF07519_consen 115 KYSYFSGCSTGGRQGLMAAQR-----------YPEDFDGILAGAPAI 150 (474)
T ss_pred CceEEEEeCCCcchHHHHHHh-----------ChhhcCeEEeCCchH
Confidence 478999999999999999995 599999999988753
No 249
>cd03557 L-arabinose_isomerase L-Arabinose isomerase (AI) catalyzes the isomerization of L-arabinose to L-ribulose, the first reaction in its conversion into D-xylulose-5-phosphate, an intermediate in the pentose phosphate pathway, which allows L-arabinose to be used as a carbon source. AI can also convert D-galactose to D-tagatose at elevated temperatures in the presence of divalent metal ions. D-tagatose, rarely found in nature, is of commercial interest as a low-calorie sugar substitute.
Probab=76.88 E-value=48 Score=28.56 Aligned_cols=131 Identities=15% Similarity=0.131 Sum_probs=74.0
Q ss_pred CchhhHHHHHHHHHHHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhc
Q 025145 97 EDWEGLDASAAHIANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNK 175 (257)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 175 (257)
.....+......+.+-+.... .+-+|+..|.---.--+..+.... ...+.+.++|++-.-+.....+...
T Consensus 16 ~~l~~~~~~~~~i~~~l~~~~~~~~~v~~~~~v~~~~~i~~~~~~~---------~~~~~~dgvi~~m~TFs~a~~~i~~ 86 (484)
T cd03557 16 EALKQVAAHSREIVDGLNASGKLPVKIVFKPVLTTPDEILAVCREA---------NADDNCAGVITWMHTFSPAKMWIAG 86 (484)
T ss_pred HHHHHHHHHHHHHHHHhcccCCCCeEEEEccccCCHHHHHHHHHHc---------cccCCccEEEEccCCCchHHHHHHH
Confidence 344455555555555554422 223666666555555455554421 1136788988776544433333332
Q ss_pred cccchHHHhhhcCCCEEEEccCCCCcccchh--------------hHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHH
Q 025145 176 IEGSHEAARRAASLPILLTHGLCDDVVPYKY--------------GEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDE 241 (257)
Q Consensus 176 ~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~--------------~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~ 241 (257)
.+..++|+|+++-....-+|.+. ..++...+...|+ +.+++. ||.-.++..++
T Consensus 87 --------~~~l~~PvL~~~~q~~~~l~~~sidmd~m~l~qaahG~~e~~~il~R~gi-~~~~v~----G~~~d~~~~~~ 153 (484)
T cd03557 87 --------LTALQKPLLHLHTQFNREIPWDTIDMDFMNLNQSAHGDREFGFIGSRMRI-PRKVVV----GHWQDPEVHEK 153 (484)
T ss_pred --------HHHcCCCEEEEccCCCccCCCCCccchHHhhhhhcCCcHHHHHHHHHcCC-CeeEEE----EeCCCHHHHHH
Confidence 35569999999987633333322 1233335555555 333333 88877888899
Q ss_pred HHHHHHHh
Q 025145 242 VCNWLTAR 249 (257)
Q Consensus 242 ~~~~l~~~ 249 (257)
+.+|++..
T Consensus 154 i~~w~raa 161 (484)
T cd03557 154 IGDWMRAA 161 (484)
T ss_pred HHHHHHHH
Confidence 99999764
No 250
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=74.99 E-value=2.6 Score=28.59 Aligned_cols=22 Identities=14% Similarity=0.388 Sum_probs=18.7
Q ss_pred CCCCceEEEEEccCCCCccchH
Q 025145 30 KGKHQATIVWLHGLGDNGSSWS 51 (257)
Q Consensus 30 ~~~~~~~vi~~HG~~~~~~~~~ 51 (257)
..+.+|.|+-+||+.|+..+|-
T Consensus 48 ~~p~KpLVlSfHG~tGtGKn~v 69 (127)
T PF06309_consen 48 PNPRKPLVLSFHGWTGTGKNFV 69 (127)
T ss_pred CCCCCCEEEEeecCCCCcHHHH
Confidence 3567899999999999999874
No 251
>PF02610 Arabinose_Isome: L-arabinose isomerase; InterPro: IPR003762 The Escherichia coli araBAD operon consists of three genes encoding three enzymes that convert L-arabinose to D-xylulose-5 phosphate. L-arabinose isomerase (AraA) 5.3.1.4 from EC catalyses the conversion of L-arabinose to L-ribulose as the first step in the pathway of L-arabinose utilization as a carbon source [].; GO: 0008733 L-arabinose isomerase activity, 0008152 metabolic process; PDB: 4F2D_A 2AJT_C 2HXG_C.
Probab=69.27 E-value=62 Score=26.49 Aligned_cols=84 Identities=15% Similarity=0.205 Sum_probs=44.4
Q ss_pred ccccceEEEeccCCCCchhhhhccccchHHHhhhcCCCEEEEccCCCCcccchhhH--------------HHHHHhhhcC
Q 025145 153 YVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDDVVPYKYGE--------------KSANCLSISG 218 (257)
Q Consensus 153 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~--------------~~~~~l~~~~ 218 (257)
.+.+.++|++---+.+...+... ....++|++++|-..+.-+|.+... ++.--+...+
T Consensus 70 ~~~c~gvi~wMhTfSpakmwI~g--------l~~l~kPllhl~tQ~~~~ip~~~iDmd~MnlNqsAHgdrEfg~i~~R~g 141 (359)
T PF02610_consen 70 DEDCDGVITWMHTFSPAKMWIPG--------LQRLQKPLLHLHTQPNRAIPWDTIDMDFMNLNQSAHGDREFGFIFSRMG 141 (359)
T ss_dssp -TTEEEEEEEESS---THHHHHH--------HHH--S-EEEEE--SSSS--TTT--HHHHHSS-HHHHHHHHHHHHHHTT
T ss_pred cCCccEEeehhhhhccHHHHHHH--------HHHhCCCeEEeecccccCCCcccCCHHHHHHhhcccccHHHHHHHHHhC
Confidence 56888888764433333333332 3566999999999999888865432 3333333343
Q ss_pred ceeeEEEEecCCCCccCHHHHHHHHHHHHHh
Q 025145 219 FRHLTFKSFEGLGHYTVPKEMDEVCNWLTAR 249 (257)
Q Consensus 219 ~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~ 249 (257)
+...++- ||+-.++..++|.+|++..
T Consensus 142 ---i~~kvV~--G~w~D~~v~~~I~~W~rAA 167 (359)
T PF02610_consen 142 ---IPRKVVV--GHWQDEEVWAEIGDWMRAA 167 (359)
T ss_dssp -----EEEEE--S-TT-HHHHHHHHHHHHHH
T ss_pred ---CCcCeEe--eeCCCHHHHHHHHHHHHHH
Confidence 3455554 6988888999999999864
No 252
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=69.05 E-value=13 Score=31.76 Aligned_cols=46 Identities=22% Similarity=0.160 Sum_probs=32.3
Q ss_pred CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch
Q 025145 119 DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR 170 (257)
Q Consensus 119 ~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 170 (257)
..||.|+|+|+|+.+....+..... .+.-.-+.-+++++.+.+...
T Consensus 446 ~RPVTLVGFSLGARvIf~CL~~Lak------kke~~iIEnViL~GaPv~~k~ 491 (633)
T KOG2385|consen 446 NRPVTLVGFSLGARVIFECLLELAK------KKEVGIIENVILFGAPVPTKA 491 (633)
T ss_pred CCceeEeeeccchHHHHHHHHHHhh------cccccceeeeeeccCCccCCH
Confidence 3499999999999999977663311 122455777888887766554
No 253
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=68.76 E-value=43 Score=26.87 Aligned_cols=29 Identities=31% Similarity=0.265 Sum_probs=20.7
Q ss_pred HHHhccCCCCceEEEEEechhHHHHHHHHH
Q 025145 110 ANLLSTEPADVKVGIGGFSMGAAVALYSAT 139 (257)
Q Consensus 110 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~ 139 (257)
.++++.... .+-+++|||+|=+.|+.++.
T Consensus 75 ~~~l~~~Gi-~P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 75 ARLLRSWGI-KPDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHHHHHTTH-CESEEEESTTHHHHHHHHTT
T ss_pred hhhhccccc-ccceeeccchhhHHHHHHCC
Confidence 344444433 37889999999999887754
No 254
>PF04378 RsmJ: Ribosomal RNA small subunit methyltransferase D, RsmJ; InterPro: IPR007473 This is a bacterial protein of unknown function, possibly secreted.; PDB: 2OO3_A.
Probab=64.42 E-value=64 Score=24.91 Aligned_cols=116 Identities=13% Similarity=0.124 Sum_probs=60.1
Q ss_pred eEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHHhhhcCCCEEEEccCCCC
Q 025145 121 KVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDD 200 (257)
Q Consensus 121 ~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~G~~D~ 200 (257)
++.+. -.=|+-++....- |..-+++|+|.|.+-..+.+............+..+.=.++.+.-.|
T Consensus 104 ~v~v~--~~DG~~~l~allP------------P~~rRglVLIDPpYE~~~dy~~v~~~l~~a~kR~~~G~~~iWYPi~~- 168 (245)
T PF04378_consen 104 RVRVH--HRDGYEGLKALLP------------PPERRGLVLIDPPYEQKDDYQRVVDALAKALKRWPTGVYAIWYPIKD- 168 (245)
T ss_dssp -EEEE---S-HHHHHHHH-S-------------TTS-EEEEE-----STTHHHHHHHHHHHHHHH-TTSEEEEEEEESS-
T ss_pred ccEEE--eCchhhhhhhhCC------------CCCCCeEEEECCCCCCchHHHHHHHHHHHHHHhcCCcEEEEEeeccc-
Confidence 55554 3556666666551 44458899999877666655554444333333333334666666655
Q ss_pred cccchhhHHHHHHhhhcCcee---eEEEEecCC-CCcc-------------CHHHHHHHHHHHHHhcCcCC
Q 025145 201 VVPYKYGEKSANCLSISGFRH---LTFKSFEGL-GHYT-------------VPKEMDEVCNWLTARLGLEG 254 (257)
Q Consensus 201 ~v~~~~~~~~~~~l~~~~~~~---~~~~~~~g~-~H~~-------------~~~~~~~~~~~l~~~l~~~~ 254 (257)
.+..+.+.+.+++.+.++ +++.+.+.. ++.+ ..+.++.++.||.+.|...+
T Consensus 169 ---~~~~~~~~~~l~~~~~~~~l~~El~v~~~~~~~gm~GSGm~iiNPPw~l~~~l~~~l~~L~~~L~~~~ 236 (245)
T PF04378_consen 169 ---RERVDRFLRALKALGIKKVLRAELRVRPPDSPRGMNGSGMLIINPPWTLDEELEEILPWLAETLAQDG 236 (245)
T ss_dssp ---HHHHHHHHHHHHHH-SSE-EEEEEE---SS---S--EEEEEEES--TTHHHHHHHHHHHHHHHSSTTT
T ss_pred ---HHHHHHHHHHHHhcCCCCeEEEEEEecCCCCcCceecceEEEEcCCccHHHHHHHHHHHHHHHhCcCC
Confidence 355677888888766533 456555432 2221 15678999999999998763
No 255
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=57.91 E-value=80 Score=23.84 Aligned_cols=118 Identities=15% Similarity=0.143 Sum_probs=60.5
Q ss_pred hhHHHHHHHHHHHhccCCCCceEEEEEech-----hHHHHHHHHHhccccCCCCCCCcccccceE-EEeccCCCCchhhh
Q 025145 100 EGLDASAAHIANLLSTEPADVKVGIGGFSM-----GAAVALYSATCCALGRYGNGIPYYVNLRAV-VGLSGWLPGSRNLR 173 (257)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~-----Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~ 173 (257)
.++...+..+.+.+-....++.++++||-- -++..+....+ ...+.-+ ++.--.+|..+.+.
T Consensus 118 ~DYe~~v~aik~~~ppl~k~e~~vlmgHGt~h~s~~~YacLd~~~~------------~~~f~~v~v~~ve~yP~~d~vi 185 (265)
T COG4822 118 NDYEICVEAIKDQIPPLNKDEILVLMGHGTDHHSNAAYACLDHVLD------------EYGFDNVFVAAVEGYPLVDTVI 185 (265)
T ss_pred hhHHHHHHHHHHhcCCcCcCeEEEEEecCCCccHHHHHHHHHHHHH------------hcCCCceEEEEecCCCcHHHHH
Confidence 455566666666665555556889999743 34444444332 2333222 22222344444444
Q ss_pred hccccchHHHhhhcCCCEEEEccCCCCcc-cchhhHHHHHHhhhcCceeeEEEEecCCCCc
Q 025145 174 NKIEGSHEAARRAASLPILLTHGLCDDVV-PYKYGEKSANCLSISGFRHLTFKSFEGLGHY 233 (257)
Q Consensus 174 ~~~~~~~~~~~~~~~~P~l~~~G~~D~~v-~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~ 233 (257)
+.+...... .-.-.|.+++.|++-..= ..+....+...+.++|. .++ ..+.|.|-.
T Consensus 186 ~~l~~~~~~--~v~L~PlMlvAG~Ha~nDMasddedswk~il~~~G~-~v~-~~l~GLGE~ 242 (265)
T COG4822 186 EYLRKNGIK--EVHLIPLMLVAGDHAKNDMASDDEDSWKNILEKNGF-KVE-VYLHGLGEN 242 (265)
T ss_pred HHHHHcCCc--eEEEeeeEEeechhhhhhhcccchHHHHHHHHhCCc-eeE-EEeecCCCc
Confidence 433221110 112369999998754321 11223678888888887 443 334555544
No 256
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=57.40 E-value=37 Score=26.75 Aligned_cols=91 Identities=16% Similarity=0.037 Sum_probs=50.2
Q ss_pred HhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhccCCCC--ceEEEEEechh
Q 025145 53 LLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTEPAD--VKVGIGGFSMG 130 (257)
Q Consensus 53 ~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~l~G~S~G 130 (257)
-.+.+..-+..++++.+-. .++|..+-.. .....+.-...++.+.+.+.....+ .|++|.|.|+|
T Consensus 53 a~E~l~~GD~A~va~QYSy----------lPSw~sfl~d---r~~a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLG 119 (289)
T PF10081_consen 53 ALEYLYGGDVAIVAMQYSY----------LPSWLSFLVD---RDAAREAARALFEAVYARWSTLPEDRRPKLYLYGESLG 119 (289)
T ss_pred HHHHHhCCCeEEEEecccc----------ccchHHHhcc---cchHHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCcc
Confidence 3445545677788776432 2355444211 1122334444555555555554322 48999999999
Q ss_pred HHHHHHHHHhccccCCCCCCCcccccceEEEecc
Q 025145 131 AAVALYSATCCALGRYGNGIPYYVNLRAVVGLSG 164 (257)
Q Consensus 131 g~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 164 (257)
++.+-....... ....++.+++...+
T Consensus 120 a~g~~~af~~~~--------~~~~~vdGalw~Gp 145 (289)
T PF10081_consen 120 AYGGEAAFDGLD--------DLRDRVDGALWVGP 145 (289)
T ss_pred ccchhhhhccHH--------HhhhhcceEEEeCC
Confidence 998776654210 12345777765544
No 257
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=54.97 E-value=35 Score=27.50 Aligned_cols=25 Identities=28% Similarity=0.098 Sum_probs=19.8
Q ss_pred cCCCCceEEEEEechhHHHHHHHHH
Q 025145 115 TEPADVKVGIGGFSMGAAVALYSAT 139 (257)
Q Consensus 115 ~~~~~~~i~l~G~S~Gg~~a~~~~~ 139 (257)
.....++|+++|+|-|++.+--+|.
T Consensus 117 ~yepGD~Iy~FGFSRGAf~aRVlag 141 (423)
T COG3673 117 NYEPGDEIYAFGFSRGAFSARVLAG 141 (423)
T ss_pred hcCCCCeEEEeeccchhHHHHHHHH
Confidence 3334469999999999999877765
No 258
>PRK12467 peptide synthase; Provisional
Probab=54.24 E-value=42 Score=37.24 Aligned_cols=88 Identities=18% Similarity=0.125 Sum_probs=53.7
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025145 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
..+.++..|...++...+..+...+. .+..++.+..++- ....| ....+........++
T Consensus 3691 ~~~~l~~~h~~~r~~~~~~~l~~~l~-~~~~~~~l~~~~~--------~~d~~------------~~~~~~~~~~~y~~~ 3749 (3956)
T PRK12467 3691 GFPALFCRHEGLGTVFDYEPLAVILE-GDRHVLGLTCRHL--------LDDGW------------QDTSLQAMAVQYADY 3749 (3956)
T ss_pred cccceeeechhhcchhhhHHHHHHhC-CCCcEEEEecccc--------ccccC------------CccchHHHHHHHHHH
Confidence 44579999999888888888877775 3455565553310 00011 112233333444444
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHhc
Q 025145 113 LSTEPADVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
+.......+..+.|+|+||.++..++...
T Consensus 3750 ~~~~~~~~p~~l~g~s~g~~~a~~~~~~l 3778 (3956)
T PRK12467 3750 ILWQQAKGPYGLLGWSLGGTLARLVAELL 3778 (3956)
T ss_pred HHHhccCCCeeeeeeecchHHHHHHHHHH
Confidence 44333334789999999999999988753
No 259
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=53.92 E-value=9.9 Score=30.18 Aligned_cols=23 Identities=13% Similarity=0.365 Sum_probs=19.1
Q ss_pred CCCCCceEEEEEccCCCCccchH
Q 025145 29 PKGKHQATIVWLHGLGDNGSSWS 51 (257)
Q Consensus 29 ~~~~~~~~vi~~HG~~~~~~~~~ 51 (257)
...+.+|.|+=+||+.|+..+|-
T Consensus 104 n~~p~KPLvLSfHG~tGTGKN~V 126 (344)
T KOG2170|consen 104 NPNPRKPLVLSFHGWTGTGKNYV 126 (344)
T ss_pred CCCCCCCeEEEecCCCCCchhHH
Confidence 33467899999999999999874
No 260
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=53.47 E-value=78 Score=24.75 Aligned_cols=104 Identities=16% Similarity=0.148 Sum_probs=54.7
Q ss_pred HHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEE-------------eccCCCCchhh
Q 025145 106 AAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVG-------------LSGWLPGSRNL 172 (257)
Q Consensus 106 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~-------------~~~~~~~~~~~ 172 (257)
.+.+.+.+++ +-.|+|-+.|..++...+.+ ....-++. +++++|..+.-
T Consensus 4 l~~l~~~i~~-----~~pIig~gaGtGlsAk~ae~-------------gGaDlI~~ynsGrfR~~G~~SlagllpygnaN 65 (268)
T PF09370_consen 4 LDRLRAQIKA-----GKPIIGAGAGTGLSAKCAEK-------------GGADLILIYNSGRFRMAGRGSLAGLLPYGNAN 65 (268)
T ss_dssp HHHHHHHHHT-----T--EEEEEESSHHHHHHHHH-------------TT-SEEEE-HHHHHHHTT--GGGGGBTEEEHH
T ss_pred HHHHHHHHhC-----CCceEEEeeccchhhHHHHh-------------cCCCEEEEecchhHhhCCCcchhhhhcccCHh
Confidence 3444444443 34588889999999999884 23333333 33444432211
Q ss_pred hhccccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCC
Q 025145 173 RNKIEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGH 232 (257)
Q Consensus 173 ~~~~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H 232 (257)
.-.+.-..+......++|++.=.+..|++.+ ...+.+.+++.|. .=+.-||-.|.
T Consensus 66 ~iv~em~~eiLp~v~~tPViaGv~atDP~~~---~~~fl~~lk~~Gf--~GV~NfPTvgl 120 (268)
T PF09370_consen 66 EIVMEMAREILPVVKDTPVIAGVCATDPFRD---MDRFLDELKELGF--SGVQNFPTVGL 120 (268)
T ss_dssp HHHHHHHHHHGGG-SSS-EEEEE-TT-TT-----HHHHHHHHHHHT---SEEEE-S-GGG
T ss_pred HHHHHHHHhhhhhccCCCEEEEecCcCCCCc---HHHHHHHHHHhCC--ceEEECCccee
Confidence 1111111222333456999999999998854 4778899998875 35667786654
No 261
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=53.14 E-value=31 Score=26.98 Aligned_cols=38 Identities=11% Similarity=0.229 Sum_probs=31.6
Q ss_pred CceEEEEEccCCCCccc--hHHHhhcCCCCceEEEccCCC
Q 025145 33 HQATIVWLHGLGDNGSS--WSQLLESLPLPNIKWICPTAP 70 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~ 70 (257)
..|+||++.|+.+++.. ...+...|...|+.|.++..|
T Consensus 54 ~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~P 93 (264)
T TIGR03709 54 RRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAP 93 (264)
T ss_pred CCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 45899999998776654 677899999999999998765
No 262
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=52.95 E-value=65 Score=28.40 Aligned_cols=90 Identities=17% Similarity=0.120 Sum_probs=49.4
Q ss_pred CCCceEEEEEccCCC---Cccc---h-HHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHH
Q 025145 31 GKHQATIVWLHGLGD---NGSS---W-SQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLD 103 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~---~~~~---~-~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 103 (257)
...+..|+-.||.|- ++.. | +.|+..| ++-++.+|+..- .+.+.+...+.+-
T Consensus 393 p~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL---~cPiiSVdYSLA------------------PEaPFPRaleEv~ 451 (880)
T KOG4388|consen 393 PRSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQAL---GCPIISVDYSLA------------------PEAPFPRALEEVF 451 (880)
T ss_pred CCCceEEEEecCCceeeeccccccHHHHHHHHHh---CCCeEEeeeccC------------------CCCCCCcHHHHHH
Confidence 334558899999773 2222 2 3355554 688888884321 1112222233222
Q ss_pred HHHHHHHHHhccC-CCCceEEEEEechhHHHHHHHHHhc
Q 025145 104 ASAAHIANLLSTE-PADVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 104 ~~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
-..-++...-... ...+||+++|-|.||.+.+..+.+.
T Consensus 452 fAYcW~inn~allG~TgEriv~aGDSAGgNL~~~VaLr~ 490 (880)
T KOG4388|consen 452 FAYCWAINNCALLGSTGERIVLAGDSAGGNLCFTVALRA 490 (880)
T ss_pred HHHHHHhcCHHHhCcccceEEEeccCCCcceeehhHHHH
Confidence 2223332211111 2346999999999999888777653
No 263
>COG0536 Obg Predicted GTPase [General function prediction only]
Probab=52.39 E-value=61 Score=26.42 Aligned_cols=113 Identities=14% Similarity=0.062 Sum_probs=71.0
Q ss_pred EEEechhHHHHHHHHHhccccCCCCCCCcccccce---EEEeccCCC--CchhhhhccccchHHHhhhcCCCEEEEccCC
Q 025145 124 IGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRA---VVGLSGWLP--GSRNLRNKIEGSHEAARRAASLPILLTHGLC 198 (257)
Q Consensus 124 l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~---~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~P~l~~~G~~ 198 (257)
+=|-|.|..+...++.+ -++.+. +|-+++.-. ..+.+.............+...|.+++.-.-
T Consensus 218 IEGAs~G~GLG~~FLrH------------IERt~vL~hviD~s~~~~~dp~~~~~~i~~EL~~Y~~~L~~K~~ivv~NKi 285 (369)
T COG0536 218 IEGASEGVGLGLRFLRH------------IERTRVLLHVIDLSPIDGRDPIEDYQTIRNELEKYSPKLAEKPRIVVLNKI 285 (369)
T ss_pred ccccccCCCccHHHHHH------------HHhhheeEEEEecCcccCCCHHHHHHHHHHHHHHhhHHhccCceEEEEecc
Confidence 44889999999999874 344443 344443221 1222222233334455677899999999999
Q ss_pred CCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHh
Q 025145 199 DDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTAR 249 (257)
Q Consensus 199 D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~ 249 (257)
|...+.+..+.+.+.+.........+. +....+.-..+....+.+++.+.
T Consensus 286 D~~~~~e~~~~~~~~l~~~~~~~~~~~-ISa~t~~g~~~L~~~~~~~l~~~ 335 (369)
T COG0536 286 DLPLDEEELEELKKALAEALGWEVFYL-ISALTREGLDELLRALAELLEET 335 (369)
T ss_pred CCCcCHHHHHHHHHHHHHhcCCCccee-eehhcccCHHHHHHHHHHHHHHh
Confidence 988888888888888886432111111 55555555666667777776654
No 264
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=51.89 E-value=80 Score=24.15 Aligned_cols=38 Identities=13% Similarity=0.245 Sum_probs=31.3
Q ss_pred CceEEEEEccCCCCccc--hHHHhhcCCCCceEEEccCCC
Q 025145 33 HQATIVWLHGLGDNGSS--WSQLLESLPLPNIKWICPTAP 70 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~ 70 (257)
..|+||++.|+.+++.. -..+...|...|+.|.++..|
T Consensus 29 ~~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~p 68 (230)
T TIGR03707 29 GARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKP 68 (230)
T ss_pred CCCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 35899999998776654 677899999999999998755
No 265
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=50.79 E-value=25 Score=29.40 Aligned_cols=60 Identities=15% Similarity=0.222 Sum_probs=36.4
Q ss_pred cCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC-------HHHHHHHHHHHHH
Q 025145 187 ASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV-------PKEMDEVCNWLTA 248 (257)
Q Consensus 187 ~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-------~~~~~~~~~~l~~ 248 (257)
...|++|+.|.-|.+-. +....+.+.+...|+ .+=.+..||.|+... ......+++||.+
T Consensus 188 ~p~P~VIv~gGlDs~qe-D~~~l~~~~l~~rGi-A~LtvDmPG~G~s~~~~l~~D~~~l~~aVLd~L~~ 254 (411)
T PF06500_consen 188 KPYPTVIVCGGLDSLQE-DLYRLFRDYLAPRGI-AMLTVDMPGQGESPKWPLTQDSSRLHQAVLDYLAS 254 (411)
T ss_dssp S-EEEEEEE--TTS-GG-GGHHHHHCCCHHCT--EEEEE--TTSGGGTTT-S-S-CCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCcchhHH-HHHHHHHHHHHhCCC-EEEEEccCCCcccccCCCCcCHHHHHHHHHHHHhc
Confidence 46799999999998743 333444556667776 556677799988642 2346788888876
No 266
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=50.06 E-value=11 Score=26.73 Aligned_cols=35 Identities=26% Similarity=0.384 Sum_probs=25.1
Q ss_pred ceEEEEEccCCCCccch--HHHhhcCCCCceEEEccC
Q 025145 34 QATIVWLHGLGDNGSSW--SQLLESLPLPNIKWICPT 68 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~--~~~~~~l~~~g~~v~~~d 68 (257)
++.|||+-|..++...- ..+.+.|...|+.++..|
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LD 37 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLD 37 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEE
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEec
Confidence 46899999998887652 335566666789999998
No 267
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=50.02 E-value=20 Score=27.30 Aligned_cols=38 Identities=16% Similarity=0.249 Sum_probs=29.3
Q ss_pred CceEEEEEccCCCCccc--hHHHhhcCCCCceEEEccCCC
Q 025145 33 HQATIVWLHGLGDNGSS--WSQLLESLPLPNIKWICPTAP 70 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~ 70 (257)
..|+||++.|+.+++.. ...+...|...|+.|.++..|
T Consensus 29 ~~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p 68 (228)
T PF03976_consen 29 GIPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP 68 (228)
T ss_dssp HHEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS-
T ss_pred CCcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC
Confidence 35799999999887764 567889998899999998765
No 268
>PRK02929 L-arabinose isomerase; Provisional
Probab=49.42 E-value=1.8e+02 Score=25.35 Aligned_cols=84 Identities=13% Similarity=0.140 Sum_probs=51.0
Q ss_pred ccccceEEEeccCCCCchhhhhccccchHHHhhhcCCCEEEEccCCCCcccch--------------hhHHHHHHhhhcC
Q 025145 153 YVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDDVVPYK--------------YGEKSANCLSISG 218 (257)
Q Consensus 153 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~--------------~~~~~~~~l~~~~ 218 (257)
.+.+.++|+.-.-+.....+... .+..++|+|+++-...+-+|.+ ....+...+...|
T Consensus 70 ~~~~dgvi~~m~TFs~a~~~i~~--------~~~l~~PvL~~~~Q~~~e~p~~~id~d~m~lnqs~~G~~e~~~il~R~g 141 (499)
T PRK02929 70 DDNCAGVITWMHTFSPAKMWIRG--------LSALQKPLLHLHTQFNAEIPWDTIDMDFMNLNQSAHGDREFGFIGARLR 141 (499)
T ss_pred cCCCcEEEEccCCCchHHHHHHH--------HHHcCCCEEEEecCCCccCCCCCCCcchhhhhhcccChHHHHHHHHHcC
Confidence 56788888765544433333332 3556999999998333332221 1234555556665
Q ss_pred ceeeEEEEecCCCCccCHHHHHHHHHHHHHh
Q 025145 219 FRHLTFKSFEGLGHYTVPKEMDEVCNWLTAR 249 (257)
Q Consensus 219 ~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~ 249 (257)
+ +.+++. ||.-.++..+.+.+|++..
T Consensus 142 i-~~~~v~----G~~~d~~v~~~i~~w~raa 167 (499)
T PRK02929 142 K-QRKVVV----GHWQDPEVQERIGAWMRVA 167 (499)
T ss_pred C-CeeEEE----EeCCCHHHHHHHHHHHHHH
Confidence 5 333333 8887788889999998764
No 269
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=48.72 E-value=23 Score=28.04 Aligned_cols=28 Identities=21% Similarity=0.213 Sum_probs=20.4
Q ss_pred HHhccCCCCceEEEEEechhHHHHHHHHH
Q 025145 111 NLLSTEPADVKVGIGGFSMGAAVALYSAT 139 (257)
Q Consensus 111 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~ 139 (257)
+.+..... .+..++|||+|=+.|+.++.
T Consensus 68 ~~l~~~g~-~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 68 RALLALLP-RPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHhcCC-CCcEEeecCHHHHHHHHHhC
Confidence 34444333 37899999999999888765
No 270
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=47.29 E-value=24 Score=27.90 Aligned_cols=28 Identities=25% Similarity=0.267 Sum_probs=19.9
Q ss_pred HHhccCCCCceEEEEEechhHHHHHHHHH
Q 025145 111 NLLSTEPADVKVGIGGFSMGAAVALYSAT 139 (257)
Q Consensus 111 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~ 139 (257)
+++...... +-.++|||+|-+.|+.++.
T Consensus 74 ~~l~~~Gi~-p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 74 RLWRSWGVR-PDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHcCCc-ccEEEecCHHHHHHHHHhC
Confidence 344443332 6799999999999987764
No 271
>PF12694 MoCo_carrier: Putative molybdenum carrier; InterPro: IPR024755 The structure of proteins in this family contain central beta strands with flanking alpha helices. The structure is similar to that of a molybdenum cofactor carrier protein.; PDB: 3IMK_A.
Probab=45.20 E-value=1.1e+02 Score=21.52 Aligned_cols=60 Identities=20% Similarity=0.139 Sum_probs=35.2
Q ss_pred HhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025145 183 ARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 183 ~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
.......|++++ |. -..+.+..+.+++..+ +++...+-|-...-.+.....+.+||...|
T Consensus 85 ~a~~~~KP~l~i----~~-~~~~~~~~v~~wl~~~---~i~vLNVAGPReS~~PgI~~~~~~~L~~~l 144 (145)
T PF12694_consen 85 FARKHGKPCLHI----DL-SIPEAAAAVAEWLREH---NIRVLNVAGPRESKAPGIYRQVRAFLEALL 144 (145)
T ss_dssp HHHHTT--EEEE----TS--HHHHHHHHHHHHHHT---T--EEEEE---TTT-TTHHHHHHHHHHHHH
T ss_pred HHHHhCCCEEEE----ec-CcccHHHHHHHHHHHC---CceEEEeccCcccCCCCHHHHHHHHHHHHh
Confidence 455678899888 22 2234477888888887 557777777666666666777777777654
No 272
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=45.12 E-value=66 Score=19.74 Aligned_cols=21 Identities=33% Similarity=0.172 Sum_probs=16.7
Q ss_pred CceEEEEEechhHHHHHHHHH
Q 025145 119 DVKVGIGGFSMGAAVALYSAT 139 (257)
Q Consensus 119 ~~~i~l~G~S~Gg~~a~~~~~ 139 (257)
++++.++|-|-|=.+|.+++.
T Consensus 39 pK~VLViGaStGyGLAsRIa~ 59 (78)
T PF12242_consen 39 PKKVLVIGASTGYGLASRIAA 59 (78)
T ss_dssp -SEEEEES-SSHHHHHHHHHH
T ss_pred CceEEEEecCCcccHHHHHHH
Confidence 358999999999999987776
No 273
>COG2961 ComJ Protein involved in catabolism of external DNA [General function prediction only]
Probab=43.33 E-value=1.6e+02 Score=22.99 Aligned_cols=98 Identities=16% Similarity=0.148 Sum_probs=61.7
Q ss_pred ccc-cceEEEeccCCCCchhhhhccccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCcee---eEEEEec
Q 025145 153 YVN-LRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRH---LTFKSFE 228 (257)
Q Consensus 153 ~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~---~~~~~~~ 228 (257)
|+. -+++|++.|.+-..+.+...............+.-..|.+--.| .+..+++.+.+++.++++ +|+.+-|
T Consensus 152 PP~erRglVLIDPPfE~~~eY~rvv~~l~~~~kRf~~g~yaiWYPik~----r~~~~~f~~~L~~~~i~kiL~iEL~VrP 227 (279)
T COG2961 152 PPKERRGLVLIDPPFELKDEYQRVVEALAEAYKRFATGTYAIWYPIKD----RRQIRRFLRALEALGIRKILQIELAVRP 227 (279)
T ss_pred CCCCcceEEEeCCCcccccHHHHHHHHHHHHHHhhcCceEEEEEeecc----hHHHHHHHHHHhhcCccceeeeEEEecC
Confidence 444 48899999988776655554444433333443444445554444 567888999999887643 4555555
Q ss_pred CCCC-c-------c------CHHHHHHHHHHHHHhcCcCC
Q 025145 229 GLGH-Y-------T------VPKEMDEVCNWLTARLGLEG 254 (257)
Q Consensus 229 g~~H-~-------~------~~~~~~~~~~~l~~~l~~~~ 254 (257)
..+- . + ..+.+..++.||.+.+...+
T Consensus 228 ~~d~~gm~gSGMivINPPwtle~ql~~~LP~L~~~L~~~~ 267 (279)
T COG2961 228 DSDPRGMNGSGMIVINPPWTLEQQLRAALPWLTTLLAQDG 267 (279)
T ss_pred CCCCCCccceeEEEECCCccHHHHHHHHHHHHHHHhccCC
Confidence 4322 1 1 15678999999999988763
No 274
>COG2160 AraA L-arabinose isomerase [Carbohydrate transport and metabolism]
Probab=41.97 E-value=2.1e+02 Score=24.04 Aligned_cols=147 Identities=18% Similarity=0.251 Sum_probs=75.4
Q ss_pred ccccCCCCCCCCCCchhhHHHHHHHHHHHhccCCC-CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEe
Q 025145 84 AWFDVGELSDDGPEDWEGLDASAAHIANLLSTEPA-DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGL 162 (257)
Q Consensus 84 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 162 (257)
.||-.+...--.....+.+.+.+..+.+-+..... +-+|++-+-=--.--+..+..+. .+.+.++++|.+
T Consensus 9 fwFviGsq~lyg~e~le~v~~~a~~iV~~ln~~~~~P~kiv~k~l~tS~d~i~~~~~~a---------n~~d~cag~Itw 79 (497)
T COG2160 9 FWFVIGSQHLYGEETLEQVEQHAEGIVDQLNEEAKLPYKIVLKPLITSPDEITAICREA---------NYDDRCAGVITW 79 (497)
T ss_pred EEEEecchhhcCHHHHHHHHHHHHHHHHHhhhhcCCCeEEEeccccCCHHHHHHHHHHh---------ccCccceeEEEE
Confidence 35555443333334455555555555555444322 23666655433333333333322 457888888865
Q ss_pred ccCCCCchhhhhccccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhh--hcCce---------eeEEEEecCCC
Q 025145 163 SGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLS--ISGFR---------HLTFKSFEGLG 231 (257)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~--~~~~~---------~~~~~~~~g~~ 231 (257)
--.+......... .+..++|++.+|-.....+|.+....-+-.+. ++|.. +....++ .|
T Consensus 80 mHtfSpakmwi~g--------~~~~~kPllhlhtQ~n~~Ipw~tiDmd~MnlnqsAHGdrE~gfI~aR~~~~~kvI--~G 149 (497)
T COG2160 80 LHTFSPAKMWING--------LRILNKPLLHLHTQFNAAIPWDSIDMDFMNLNQSAHGDREYGFIGARMRIQHKVI--TG 149 (497)
T ss_pred EEecChHHHhhcc--------cccccCceEEeeccccccCCcccccchhhcccccccCcchhehhhhhhccccceE--Ee
Confidence 3222212222211 24458899999988888888765422111111 11110 1222333 36
Q ss_pred CccCHHHHHHHHHHHHHh
Q 025145 232 HYTVPKEMDEVCNWLTAR 249 (257)
Q Consensus 232 H~~~~~~~~~~~~~l~~~ 249 (257)
|+-.++.-+++.+|++..
T Consensus 150 ~w~D~~v~~eig~WM~~A 167 (497)
T COG2160 150 HWQDKEVHEEIGDWMRVA 167 (497)
T ss_pred ecCCHHHHHHHHHHHHHH
Confidence 777788889999999764
No 275
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=41.94 E-value=30 Score=27.15 Aligned_cols=19 Identities=32% Similarity=0.240 Sum_probs=16.7
Q ss_pred eEEEEEechhHHHHHHHHH
Q 025145 121 KVGIGGFSMGAAVALYSAT 139 (257)
Q Consensus 121 ~i~l~G~S~Gg~~a~~~~~ 139 (257)
+-.++|||+|=+.|+.++.
T Consensus 84 p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 84 PDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred CCEEeecCHHHHHHHHHhC
Confidence 7799999999998888775
No 276
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=41.23 E-value=31 Score=26.80 Aligned_cols=15 Identities=27% Similarity=0.224 Sum_probs=12.4
Q ss_pred ceEEEEEechhHHHH
Q 025145 120 VKVGIGGFSMGAAVA 134 (257)
Q Consensus 120 ~~i~l~G~S~Gg~~a 134 (257)
..|+++|||+|..=-
T Consensus 235 ~~I~i~GhSl~~~D~ 249 (270)
T PF14253_consen 235 DEIIIYGHSLGEVDY 249 (270)
T ss_pred CEEEEEeCCCchhhH
Confidence 599999999997533
No 277
>COG4425 Predicted membrane protein [Function unknown]
Probab=40.71 E-value=59 Score=27.58 Aligned_cols=37 Identities=19% Similarity=0.140 Sum_probs=24.6
Q ss_pred hhHHHHHHHHHHHhccCCCC--ceEEEEEechhHHHHHH
Q 025145 100 EGLDASAAHIANLLSTEPAD--VKVGIGGFSMGAAVALY 136 (257)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~ 136 (257)
+......+++..++.+.... .|.+|.|.|+|++-.-.
T Consensus 375 ~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa~~s~~ 413 (588)
T COG4425 375 DAARALFEAVYGYWTQLPKSSRPKLYLHGESLGAMGSEA 413 (588)
T ss_pred hHHHHHHHHHHHHHHhCCcCCCCceEEeccccccccCcc
Confidence 34444556666666654332 49999999999986554
No 278
>PRK10279 hypothetical protein; Provisional
Probab=40.69 E-value=36 Score=27.19 Aligned_cols=20 Identities=25% Similarity=0.142 Sum_probs=17.5
Q ss_pred eEEEEEechhHHHHHHHHHh
Q 025145 121 KVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 121 ~i~l~G~S~Gg~~a~~~~~~ 140 (257)
.-.++|-|+|+.++..++..
T Consensus 34 ~d~i~GtS~GAlvga~yA~g 53 (300)
T PRK10279 34 IDIVAGCSIGSLVGAAYACD 53 (300)
T ss_pred cCEEEEEcHHHHHHHHHHcC
Confidence 56899999999999999863
No 279
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=39.88 E-value=1.9e+02 Score=22.98 Aligned_cols=125 Identities=11% Similarity=0.016 Sum_probs=57.9
Q ss_pred chHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhccCCCCceEEEEEec
Q 025145 49 SWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTEPADVKVGIGGFS 128 (257)
Q Consensus 49 ~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S 128 (257)
.++.+++.+.+.|..-+.+-. ..++....+.+...+.++.+.+..+. . -.+++|-+
T Consensus 27 ~l~~li~~l~~~Gv~gi~v~G--------------------stGE~~~Lt~eEr~~v~~~~~~~~~g---~-~pvi~gv~ 82 (296)
T TIGR03249 27 AYRENIEWLLGYGLEALFAAG--------------------GTGEFFSLTPAEYEQVVEIAVSTAKG---K-VPVYTGVG 82 (296)
T ss_pred HHHHHHHHHHhcCCCEEEECC--------------------CCcCcccCCHHHHHHHHHHHHHHhCC---C-CcEEEecC
Confidence 356677777667776666541 11111222333444444444444322 1 23455654
Q ss_pred hhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc--hhhhhccccchHHHhhhcCCCEEEEccCCCCcccchh
Q 025145 129 MGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS--RNLRNKIEGSHEAARRAASLPILLTHGLCDDVVPYKY 206 (257)
Q Consensus 129 ~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~ 206 (257)
..-.-++.++... ....+.+++++.|++... +.+.+.+ .......+.|+++.+ ..-..++++.
T Consensus 83 ~~t~~ai~~a~~a----------~~~Gadav~~~pP~y~~~s~~~i~~~f----~~v~~a~~~pvilYn-~~g~~l~~~~ 147 (296)
T TIGR03249 83 GNTSDAIEIARLA----------EKAGADGYLLLPPYLINGEQEGLYAHV----EAVCESTDLGVIVYQ-RDNAVLNADT 147 (296)
T ss_pred ccHHHHHHHHHHH----------HHhCCCEEEECCCCCCCCCHHHHHHHH----HHHHhccCCCEEEEe-CCCCCCCHHH
Confidence 2223333343321 134567787787766432 2222221 222334568888876 2222344444
Q ss_pred hHHHHH
Q 025145 207 GEKSAN 212 (257)
Q Consensus 207 ~~~~~~ 212 (257)
..++.+
T Consensus 148 ~~~La~ 153 (296)
T TIGR03249 148 LERLAD 153 (296)
T ss_pred HHHHHh
Confidence 444443
No 280
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=39.56 E-value=62 Score=25.86 Aligned_cols=17 Identities=35% Similarity=0.350 Sum_probs=15.5
Q ss_pred EEEEechhHHHHHHHHH
Q 025145 123 GIGGFSMGAAVALYSAT 139 (257)
Q Consensus 123 ~l~G~S~Gg~~a~~~~~ 139 (257)
.+.|-|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 58999999999999876
No 281
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=38.24 E-value=42 Score=26.90 Aligned_cols=20 Identities=30% Similarity=0.288 Sum_probs=17.4
Q ss_pred eEEEEEechhHHHHHHHHHh
Q 025145 121 KVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 121 ~i~l~G~S~Gg~~a~~~~~~ 140 (257)
.=.++|-|+|+.++..++..
T Consensus 44 ~d~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 44 VDMVGGTSIGAFIGALYAEE 63 (306)
T ss_pred CCEEEEECHHHHHHHHHHcC
Confidence 44799999999999999875
No 282
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=38.20 E-value=43 Score=23.99 Aligned_cols=20 Identities=40% Similarity=0.227 Sum_probs=17.8
Q ss_pred eEEEEEechhHHHHHHHHHh
Q 025145 121 KVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 121 ~i~l~G~S~Gg~~a~~~~~~ 140 (257)
.-.+.|-|.|+.++..++..
T Consensus 27 ~d~v~GtSaGAi~aa~~a~g 46 (172)
T cd07198 27 IDIIAGTSAGAIVAALLASG 46 (172)
T ss_pred CCEEEEECHHHHHHHHHHcC
Confidence 55899999999999999884
No 283
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=37.58 E-value=1.4e+02 Score=25.01 Aligned_cols=103 Identities=16% Similarity=-0.023 Sum_probs=53.8
Q ss_pred EccCCCCc-cchHHHhhcCCCCceEEEccCCCCCCcccCCCC-cccccccCCCCCC----CCCCchhhHHHHHHHHHHHh
Q 025145 40 LHGLGDNG-SSWSQLLESLPLPNIKWICPTAPTRPVAILGGF-PCTAWFDVGELSD----DGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 40 ~HG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~-~~~~w~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 113 (257)
+=|-..++ ..+..+.+.+...|..++.+|.--.+....... ....--...+... ...+.-..+..+...+..++
T Consensus 6 iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga~~~v 85 (403)
T PF06792_consen 6 IIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGAARFV 85 (403)
T ss_pred EEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHHHHHH
Confidence 33444444 456777777777999999999544333222100 0000000000000 00112233444555555555
Q ss_pred ccCCCC---ceEEEEEechhHHHHHHHHHhcc
Q 025145 114 STEPAD---VKVGIGGFSMGAAVALYSATCCA 142 (257)
Q Consensus 114 ~~~~~~---~~i~l~G~S~Gg~~a~~~~~~~~ 142 (257)
...... .-|+-+|-|.|..++...+...|
T Consensus 86 ~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LP 117 (403)
T PF06792_consen 86 SDLYDEGKIDGVIGIGGSGGTALATAAMRALP 117 (403)
T ss_pred HHHHhcCCccEEEEecCCccHHHHHHHHHhCC
Confidence 544332 36788899999999999988653
No 284
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=36.60 E-value=47 Score=24.20 Aligned_cols=20 Identities=35% Similarity=0.275 Sum_probs=17.5
Q ss_pred eEEEEEechhHHHHHHHHHh
Q 025145 121 KVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 121 ~i~l~G~S~Gg~~a~~~~~~ 140 (257)
.=.++|-|.||.++..++..
T Consensus 28 ~d~i~GtSaGai~aa~~a~g 47 (194)
T cd07207 28 KKRVAGTSAGAITAALLALG 47 (194)
T ss_pred cceEEEECHHHHHHHHHHcC
Confidence 35899999999999999874
No 285
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=36.44 E-value=68 Score=26.54 Aligned_cols=73 Identities=15% Similarity=0.188 Sum_probs=44.9
Q ss_pred CceEEEEEccCCCCcc-------chHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025145 33 HQATIVWLHGLGDNGS-------SWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~-------~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
+...||++||..-++. .|..+++.+.+++...+ +|.-++|+ ...++++
T Consensus 170 ~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~-~D~AYQGF------------------------~~GleeD 224 (396)
T COG1448 170 PEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPF-FDIAYQGF------------------------ADGLEED 224 (396)
T ss_pred CCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeee-eehhhhhh------------------------ccchHHH
Confidence 3457999999776543 58888888876666544 46443332 1224666
Q ss_pred HHHHHHHhccCCCCceEEEEEechhHHHH
Q 025145 106 AAHIANLLSTEPADVKVGIGGFSMGAAVA 134 (257)
Q Consensus 106 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a 134 (257)
+..++.++... +-.++..|..=..+
T Consensus 225 a~~lR~~a~~~----~~~lva~S~SKnfg 249 (396)
T COG1448 225 AYALRLFAEVG----PELLVASSFSKNFG 249 (396)
T ss_pred HHHHHHHHHhC----CcEEEEehhhhhhh
Confidence 77777777654 22666666554433
No 286
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=36.32 E-value=60 Score=26.09 Aligned_cols=22 Identities=27% Similarity=0.188 Sum_probs=18.3
Q ss_pred CCceEEEEEechhHHHHHHHHH
Q 025145 118 ADVKVGIGGFSMGAAVALYSAT 139 (257)
Q Consensus 118 ~~~~i~l~G~S~Gg~~a~~~~~ 139 (257)
...+.++.|||+|=+.|+..+.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 3447899999999999988765
No 287
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=35.84 E-value=57 Score=24.90 Aligned_cols=21 Identities=29% Similarity=0.279 Sum_probs=18.1
Q ss_pred eEEEEEechhHHHHHHHHHhc
Q 025145 121 KVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 121 ~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
.-.+.|-|.|+.++..++...
T Consensus 30 ~~~i~G~SAGAl~aa~~asg~ 50 (233)
T cd07224 30 TTPLAGASAGSLAAACSASGL 50 (233)
T ss_pred CCEEEEEcHHHHHHHHHHcCC
Confidence 447999999999999999853
No 288
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=35.25 E-value=34 Score=27.51 Aligned_cols=18 Identities=33% Similarity=0.246 Sum_probs=16.2
Q ss_pred EEEEechhHHHHHHHHHh
Q 025145 123 GIGGFSMGAAVALYSATC 140 (257)
Q Consensus 123 ~l~G~S~Gg~~a~~~~~~ 140 (257)
.+.|-|.||.+|+.++..
T Consensus 35 ~i~GTStGgiIA~~la~g 52 (312)
T cd07212 35 WIAGTSTGGILALALLHG 52 (312)
T ss_pred EEEeeChHHHHHHHHHcC
Confidence 689999999999999873
No 289
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=35.07 E-value=53 Score=25.79 Aligned_cols=20 Identities=35% Similarity=0.291 Sum_probs=17.4
Q ss_pred eEEEEEechhHHHHHHHHHh
Q 025145 121 KVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 121 ~i~l~G~S~Gg~~a~~~~~~ 140 (257)
-=.+.|-|+|+.++..++..
T Consensus 39 ~d~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 39 IDAIGGTSIGSFVGGLYARE 58 (269)
T ss_pred ccEEEEECHHHHHHHHHHcC
Confidence 44799999999999999874
No 290
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=35.01 E-value=16 Score=27.38 Aligned_cols=37 Identities=8% Similarity=0.105 Sum_probs=26.4
Q ss_pred CceEEEEEccCCCCccc--hH-HHhhcCCCCceEEEccCC
Q 025145 33 HQATIVWLHGLGDNGSS--WS-QLLESLPLPNIKWICPTA 69 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~--~~-~~~~~l~~~g~~v~~~d~ 69 (257)
..+.|.|++-.+.+... |. ...+.|...|+.+.-.+.
T Consensus 31 ~~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l 70 (224)
T COG3340 31 KRKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHL 70 (224)
T ss_pred CCceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeec
Confidence 36689999998877765 43 355667777888877663
No 291
>COG2326 Uncharacterized conserved protein [Function unknown]
Probab=34.80 E-value=2.2e+02 Score=22.28 Aligned_cols=39 Identities=18% Similarity=0.320 Sum_probs=31.3
Q ss_pred CCceEEEEEccCC--CCccchHHHhhcCCCCceEEEccCCC
Q 025145 32 KHQATIVWLHGLG--DNGSSWSQLLESLPLPNIKWICPTAP 70 (257)
Q Consensus 32 ~~~~~vi~~HG~~--~~~~~~~~~~~~l~~~g~~v~~~d~~ 70 (257)
.+..+|+++-|.. |-......+.+.|...+++|+++-.|
T Consensus 71 ~~~~vvivfEGrDAAGKgG~Ikri~~~lNPR~~rvval~aP 111 (270)
T COG2326 71 TGQRVVIVFEGRDAAGKGGAIKRITEALNPRGARVVALPAP 111 (270)
T ss_pred cCCeEEEEEecccccCCCchhHHHhhhcCCceeEEeecCCC
Confidence 3456899999965 44456788999999999999998766
No 292
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=33.31 E-value=2.1e+02 Score=23.14 Aligned_cols=35 Identities=14% Similarity=0.004 Sum_probs=25.0
Q ss_pred EEEEEccCCCCccchHHHhhcCCCCceEEEccCCC
Q 025145 36 TIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAP 70 (257)
Q Consensus 36 ~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 70 (257)
.+|...|.|++-..+..+++.|.+.|+.|..+-.+
T Consensus 4 i~i~~~g~gG~~~~~~~la~~L~~~g~ev~vv~~~ 38 (357)
T PRK00726 4 ILLAGGGTGGHVFPALALAEELKKRGWEVLYLGTA 38 (357)
T ss_pred EEEEcCcchHhhhHHHHHHHHHHhCCCEEEEEECC
Confidence 45555677777766667888888788888776543
No 293
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=33.19 E-value=65 Score=24.35 Aligned_cols=20 Identities=35% Similarity=0.262 Sum_probs=17.3
Q ss_pred eEEEEEechhHHHHHHHHHh
Q 025145 121 KVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 121 ~i~l~G~S~Gg~~a~~~~~~ 140 (257)
.-.++|-|.|+.++..++..
T Consensus 29 ~~~i~GtSaGAi~aa~~a~g 48 (221)
T cd07210 29 PSAISGTSAGALVGGLFASG 48 (221)
T ss_pred ceEEEEeCHHHHHHHHHHcC
Confidence 44799999999999999874
No 294
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=32.77 E-value=57 Score=26.07 Aligned_cols=20 Identities=40% Similarity=0.235 Sum_probs=18.1
Q ss_pred eEEEEEechhHHHHHHHHHh
Q 025145 121 KVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 121 ~i~l~G~S~Gg~~a~~~~~~ 140 (257)
.-.|.|-|+|+.++..+|..
T Consensus 40 ~~~iaGtS~GAiva~l~A~g 59 (306)
T COG1752 40 IDVIAGTSAGAIVAALYAAG 59 (306)
T ss_pred ccEEEecCHHHHHHHHHHcC
Confidence 66899999999999999984
No 295
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=31.58 E-value=2.6e+02 Score=22.12 Aligned_cols=76 Identities=16% Similarity=0.194 Sum_probs=34.7
Q ss_pred EEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHHhhhcCCCEEEEccCCCCcc
Q 025145 123 GIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDDVV 202 (257)
Q Consensus 123 ~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~G~~D~~v 202 (257)
+++|-+.+-.-++.++... ....+.+++++.|++.... .+.+...........+.|+++.+- ....+
T Consensus 72 vi~gv~~~t~~~i~~a~~a----------~~~Gad~v~~~pP~y~~~~--~~~i~~~f~~v~~~~~~pi~lYn~-~g~~l 138 (289)
T cd00951 72 VLAGAGYGTATAIAYAQAA----------EKAGADGILLLPPYLTEAP--QEGLYAHVEAVCKSTDLGVIVYNR-ANAVL 138 (289)
T ss_pred EEEecCCCHHHHHHHHHHH----------HHhCCCEEEECCCCCCCCC--HHHHHHHHHHHHhcCCCCEEEEeC-CCCCC
Confidence 4455554444555554431 1345677877777654321 111111111223345678777762 22234
Q ss_pred cchhhHHHH
Q 025145 203 PYKYGEKSA 211 (257)
Q Consensus 203 ~~~~~~~~~ 211 (257)
+++...++.
T Consensus 139 ~~~~l~~L~ 147 (289)
T cd00951 139 TADSLARLA 147 (289)
T ss_pred CHHHHHHHH
Confidence 444444443
No 296
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=30.89 E-value=1.2e+02 Score=19.96 Aligned_cols=38 Identities=11% Similarity=-0.084 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHH
Q 025145 102 LDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSAT 139 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~ 139 (257)
..+....+.+.+++....+.+.++--=.||......+.
T Consensus 40 ~~~~~~~l~~~i~~~~~~~~vlil~Dl~ggsp~n~a~~ 77 (116)
T PF03610_consen 40 IEDFEEKLEEAIEELDEGDGVLILTDLGGGSPFNEAAR 77 (116)
T ss_dssp HHHHHHHHHHHHHHCCTTSEEEEEESSTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCcEEEEeeCCCCccchHHHH
Confidence 34556666666755544458888887777776666554
No 297
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=30.86 E-value=22 Score=27.80 Aligned_cols=34 Identities=12% Similarity=0.133 Sum_probs=27.1
Q ss_pred eEEEEEccCCCCccchHHHhhcCCCCceEEEccC
Q 025145 35 ATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPT 68 (257)
Q Consensus 35 ~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d 68 (257)
..||++|....+......++..|.++||.++.++
T Consensus 231 G~IILmHd~~~T~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 231 GAMVLMHPTASSTEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred CcEEEEcCCccHHHHHHHHHHHHHHCCCEEEeHH
Confidence 4688999876666667778888888999988764
No 298
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=30.86 E-value=3.3e+02 Score=23.07 Aligned_cols=108 Identities=14% Similarity=0.062 Sum_probs=55.4
Q ss_pred CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHHhhhcCCCEEEEccCC
Q 025145 119 DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLC 198 (257)
Q Consensus 119 ~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~G~~ 198 (257)
++++++.+.+-++.-++.+.... +..+ .+.=.|+++..+.-..+... -.-+|+.+.....
T Consensus 146 P~~~Vv~~G~T~ane~l~fcLad------------pgda-fLvPtPyY~gfdrdl~~rTg-------veivpv~c~Ss~~ 205 (471)
T KOG0256|consen 146 PERVVVTNGATSANETLMFCLAD------------PGDA-FLVPTPYYPGFDRDLRWRTG-------VEIVPVHCSSSNG 205 (471)
T ss_pred ccceEEecccchhhHHHHHHhcC------------CCce-eeecCCCCCcccccceeccC-------ceEEEEEeecCCC
Confidence 46899999888888888877632 2222 22234455443322221110 0113333332222
Q ss_pred CCcccchhhHHHHHHhhhcCceeeEEEEecC----CCCccCHHHHHHHHHHHHH
Q 025145 199 DDVVPYKYGEKSANCLSISGFRHLTFKSFEG----LGHYTVPKEMDEVCNWLTA 248 (257)
Q Consensus 199 D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g----~~H~~~~~~~~~~~~~l~~ 248 (257)
..+..+.-+..+++.++.+. +++=+++-+ .|-.+.++.+..+++|..+
T Consensus 206 -f~itv~alE~A~~~A~~~~~-kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~ 257 (471)
T KOG0256|consen 206 -FQITVEALEAALNQARKLGL-KVKGVLITNPSNPLGTTLSPEELISLLNFASR 257 (471)
T ss_pred -ccccHHHHHHHHHHHHHhCC-ceeEEEEeCCCCCCCCccCHHHHHHHHHHHhh
Confidence 23334444555555555555 455444432 2334457788888888765
No 299
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=30.47 E-value=3.2e+02 Score=23.12 Aligned_cols=109 Identities=14% Similarity=0.058 Sum_probs=62.4
Q ss_pred CCCceEEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCC-CCCc
Q 025145 20 EFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDD-GPED 98 (257)
Q Consensus 20 ~~~~~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~-~~~~ 98 (257)
.+......-+.+.+...|+|+--..+..+.-...++.+.+.++-|+-.|.. .|+..-+.+++ ....
T Consensus 34 ~~~~~~v~~p~g~~~~~villSd~~G~~d~~~s~a~al~~~~Alv~~vd~~-------------~ylaaL~~dd~ecvyl 100 (456)
T COG3946 34 RLSNIPVLVPDGDPQGLVILLSDEAGIGDQERSRADALLARGALVAPVDLG-------------AYLAALGADDNECVYL 100 (456)
T ss_pred ccccCccccccCCcceeeEEEEcccChhhhhcchhHHHhhcCCeeeccccc-------------hhhhccccCCCcceEE
Confidence 344445555666677788888776665555445567777788999888865 22322111111 1112
Q ss_pred hhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhcc
Q 025145 99 WEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCA 142 (257)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~ 142 (257)
..+++.....+.......... .-+|.|--.||.++...+.+.+
T Consensus 101 isd~Ealsr~~Qr~a~~g~yr-~PVl~g~g~Gg~~A~asaaqSp 143 (456)
T COG3946 101 ISDFEALSREAQRAADLGVYR-LPVLTGPGQGGTLAYASAAQSP 143 (456)
T ss_pred ehhHHHHhHHHHHHhhccCcc-cceEeecCCCcHHHHHHHhhCh
Confidence 333344444443333322222 4578889999999999888653
No 300
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=30.25 E-value=85 Score=22.55 Aligned_cols=20 Identities=35% Similarity=0.220 Sum_probs=17.6
Q ss_pred eEEEEEechhHHHHHHHHHh
Q 025145 121 KVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 121 ~i~l~G~S~Gg~~a~~~~~~ 140 (257)
.=.++|-|.|+.++..++..
T Consensus 29 ~d~i~GtSaGAi~aa~~a~g 48 (175)
T cd07228 29 IDIIAGSSIGALVGALYAAG 48 (175)
T ss_pred eeEEEEeCHHHHHHHHHHcC
Confidence 55899999999999999874
No 301
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=29.98 E-value=90 Score=22.32 Aligned_cols=20 Identities=30% Similarity=0.167 Sum_probs=17.4
Q ss_pred eEEEEEechhHHHHHHHHHh
Q 025145 121 KVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 121 ~i~l~G~S~Gg~~a~~~~~~ 140 (257)
.=.++|-|.|+.++..++..
T Consensus 29 ~d~i~GtSaGal~a~~~a~g 48 (175)
T cd07205 29 IDIVSGTSAGAIVGALYAAG 48 (175)
T ss_pred eeEEEEECHHHHHHHHHHcC
Confidence 44899999999999999864
No 302
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=29.75 E-value=60 Score=27.86 Aligned_cols=76 Identities=9% Similarity=0.105 Sum_probs=47.3
Q ss_pred EEEccCCCCccchHH-HhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhccC
Q 025145 38 VWLHGLGDNGSSWSQ-LLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTE 116 (257)
Q Consensus 38 i~~HG~~~~~~~~~~-~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (257)
+|--|+|.+...... .++.-..+||.|+.+|-.||.. +. ...+..+.++++..
T Consensus 442 lfekGYgkd~a~vak~AI~~a~~~gfDVvLiDTAGR~~-----------------------~~---~~lm~~l~k~~~~~ 495 (587)
T KOG0781|consen 442 LFEKGYGKDAAGVAKEAIQEARNQGFDVVLIDTAGRMH-----------------------NN---APLMTSLAKLIKVN 495 (587)
T ss_pred HHhhhcCCChHHHHHHHHHHHHhcCCCEEEEecccccc-----------------------CC---hhHHHHHHHHHhcC
Confidence 455666666443332 2333346899999999664311 01 23356666777655
Q ss_pred CCCceEEEEEechhHHHHHHHHHh
Q 025145 117 PADVKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 117 ~~~~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
.++ .|..+|.-+=|.=++.-+..
T Consensus 496 ~pd-~i~~vgealvg~dsv~q~~~ 518 (587)
T KOG0781|consen 496 KPD-LILFVGEALVGNDSVDQLKK 518 (587)
T ss_pred CCc-eEEEehhhhhCcHHHHHHHH
Confidence 444 99999998888877766553
No 303
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional
Probab=29.41 E-value=3e+02 Score=22.03 Aligned_cols=20 Identities=15% Similarity=0.110 Sum_probs=12.9
Q ss_pred chHHHhhcCCCCceEEEccC
Q 025145 49 SWSQLLESLPLPNIKWICPT 68 (257)
Q Consensus 49 ~~~~~~~~l~~~g~~v~~~d 68 (257)
.+..+++.+...|..-+.+.
T Consensus 29 ~l~~li~~l~~~Gv~Gi~~~ 48 (303)
T PRK03620 29 AYREHLEWLAPYGAAALFAA 48 (303)
T ss_pred HHHHHHHHHHHcCCCEEEEC
Confidence 35567777766777666654
No 304
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=29.39 E-value=16 Score=26.72 Aligned_cols=34 Identities=12% Similarity=0.258 Sum_probs=23.5
Q ss_pred eEEEEEccC---CCCccchHHHhhcCCCCceEEEccC
Q 025145 35 ATIVWLHGL---GDNGSSWSQLLESLPLPNIKWICPT 68 (257)
Q Consensus 35 ~~vi~~HG~---~~~~~~~~~~~~~l~~~g~~v~~~d 68 (257)
..||++|.. ..+......++..|.++||.++.++
T Consensus 152 g~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 152 GDIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CCEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 369999942 2233445667788878999988764
No 305
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=28.37 E-value=1.8e+02 Score=19.09 Aligned_cols=77 Identities=17% Similarity=0.125 Sum_probs=43.7
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025145 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
.+|+|||.--+.........+...+. ..+.|+-.|...+ . .+.-+++.++
T Consensus 13 ~~~VVifSKs~C~~c~~~k~ll~~~~-v~~~vvELD~~~~--------------------------g---~eiq~~l~~~ 62 (104)
T KOG1752|consen 13 ENPVVIFSKSSCPYCHRAKELLSDLG-VNPKVVELDEDED--------------------------G---SEIQKALKKL 62 (104)
T ss_pred cCCEEEEECCcCchHHHHHHHHHhCC-CCCEEEEccCCCC--------------------------c---HHHHHHHHHh
Confidence 46788888754444444444555543 5667776662210 1 1223333333
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHh
Q 025145 113 LSTEPADVKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
..+..-+ .|+|-|.+.||.--+..+..
T Consensus 63 tg~~tvP-~vFI~Gk~iGG~~dl~~lh~ 89 (104)
T KOG1752|consen 63 TGQRTVP-NVFIGGKFIGGASDLMALHK 89 (104)
T ss_pred cCCCCCC-EEEECCEEEcCHHHHHHHHH
Confidence 3333333 89999999999877766653
No 306
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=27.10 E-value=86 Score=23.52 Aligned_cols=21 Identities=29% Similarity=0.083 Sum_probs=18.2
Q ss_pred eEEEEEechhHHHHHHHHHhc
Q 025145 121 KVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 121 ~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
.-.+.|.|.|+.++..++...
T Consensus 27 ~d~i~GtS~GAl~aa~~a~~~ 47 (215)
T cd07209 27 PDIISGTSIGAINGALIAGGD 47 (215)
T ss_pred CCEEEEECHHHHHHHHHHcCC
Confidence 448999999999999999854
No 307
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=26.56 E-value=1.9e+02 Score=18.79 Aligned_cols=46 Identities=17% Similarity=0.122 Sum_probs=28.2
Q ss_pred HHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEE
Q 025145 106 AAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVG 161 (257)
Q Consensus 106 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~ 161 (257)
...+.++++..... +++|+|-|-=.=.-+...... .+|+++.++..
T Consensus 52 ~~~i~~i~~~fP~~-kfiLIGDsgq~DpeiY~~ia~---------~~P~~i~ai~I 97 (100)
T PF09949_consen 52 RDNIERILRDFPER-KFILIGDSGQHDPEIYAEIAR---------RFPGRILAIYI 97 (100)
T ss_pred HHHHHHHHHHCCCC-cEEEEeeCCCcCHHHHHHHHH---------HCCCCEEEEEE
Confidence 44455555544433 999999987665444433321 56888888753
No 308
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=26.46 E-value=3.3e+02 Score=23.77 Aligned_cols=39 Identities=15% Similarity=0.313 Sum_probs=31.7
Q ss_pred CCceEEEEEccCCCCcc--chHHHhhcCCCCceEEEccCCC
Q 025145 32 KHQATIVWLHGLGDNGS--SWSQLLESLPLPNIKWICPTAP 70 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~ 70 (257)
...|+||++-|+.+.+. ....+...+...|+.|+.+-.|
T Consensus 296 ~~~~vlivfeG~DaAGKgg~I~rl~~~ldPrg~~v~~~~~P 336 (493)
T TIGR03708 296 RKRSLVLVFEGWDAAGKGGAIRRVTEALDARQYRVVPIAAP 336 (493)
T ss_pred CCCCEEEEEEcccCCCCcHHHHHHHhhcCCCeeEEEeCCCc
Confidence 45689999999876554 4678999999999999998755
No 309
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=26.31 E-value=66 Score=22.90 Aligned_cols=20 Identities=35% Similarity=0.079 Sum_probs=16.6
Q ss_pred eEEEEEechhHHHHHHHHHh
Q 025145 121 KVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 121 ~i~l~G~S~Gg~~a~~~~~~ 140 (257)
.-.+.|-|.||.+++.++..
T Consensus 28 ~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 28 FDVISGTSAGALNAALLALG 47 (204)
T ss_dssp -SEEEEECCHHHHHHHHHTC
T ss_pred ccEEEEcChhhhhHHHHHhC
Confidence 45799999999999888874
No 310
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=25.52 E-value=68 Score=24.91 Aligned_cols=19 Identities=26% Similarity=0.025 Sum_probs=17.1
Q ss_pred EEEEechhHHHHHHHHHhc
Q 025145 123 GIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 123 ~l~G~S~Gg~~a~~~~~~~ 141 (257)
.++|-|.|+.++..++...
T Consensus 30 ~i~GtSaGAi~a~~~~~g~ 48 (266)
T cd07208 30 LVIGVSAGALNAASYLSGQ 48 (266)
T ss_pred EEEEECHHHHhHHHHHhCC
Confidence 7999999999999998853
No 311
>PF02606 LpxK: Tetraacyldisaccharide-1-P 4'-kinase; InterPro: IPR003758 Tetraacyldisaccharide 4'-kinase phosphorylates the 4'-position of a tetraacyldisaccharide 1-phosphate precursor (DS-1-P) of lipid A, but the enzyme has not yet been purified because of instability []. This enzyme is involved in the synthesis of lipid A portion of the bacterial lipopolysaccharide layer (LPS).; GO: 0005524 ATP binding, 0009029 tetraacyldisaccharide 4'-kinase activity, 0009245 lipid A biosynthetic process
Probab=25.48 E-value=2.7e+02 Score=22.61 Aligned_cols=53 Identities=15% Similarity=0.212 Sum_probs=37.7
Q ss_pred hcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHH
Q 025145 186 AASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWL 246 (257)
Q Consensus 186 ~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l 246 (257)
....+++.+.|-.+ -+.+.+.+++.|..-+....|++ .|.+..+.++.+.+..
T Consensus 225 l~~~~v~a~sGIg~-------P~~F~~~L~~~G~~~~~~~~f~D-Hh~yt~~dl~~l~~~a 277 (326)
T PF02606_consen 225 LKGKPVLAFSGIGN-------PERFFDTLESLGIEVVGTLAFPD-HHRYTEQDLEKLEAEA 277 (326)
T ss_pred ccCCeeEEEEEcCC-------hHHHHHHHHHcCCeEEEeeECCC-CCCCCHHHHHHHHHhh
Confidence 34567777777665 36688888888874456888996 7888877777766643
No 312
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=24.76 E-value=32 Score=26.04 Aligned_cols=34 Identities=18% Similarity=0.352 Sum_probs=25.7
Q ss_pred eEEEEEccC-CCCccchHHHhhcCCCCceEEEccC
Q 025145 35 ATIVWLHGL-GDNGSSWSQLLESLPLPNIKWICPT 68 (257)
Q Consensus 35 ~~vi~~HG~-~~~~~~~~~~~~~l~~~g~~v~~~d 68 (257)
..||++|.. ..+......++..|..+||.++.++
T Consensus 187 g~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 187 GAILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 479999974 3344556778888888999988764
No 313
>PLN02606 palmitoyl-protein thioesterase
Probab=24.45 E-value=3.8e+02 Score=21.63 Aligned_cols=39 Identities=21% Similarity=0.216 Sum_probs=25.9
Q ss_pred cCCCEEEEccCCCCcccchhhHHHHHHhhhc-CceeeEEEEe
Q 025145 187 ASLPILLTHGLCDDVVPYKYGEKSANCLSIS-GFRHLTFKSF 227 (257)
Q Consensus 187 ~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~-~~~~~~~~~~ 227 (257)
...|++++||--|...+. ....+.+.+.+. +. ....+.+
T Consensus 25 ~~~PvViwHGlgD~~~~~-~~~~~~~~i~~~~~~-pg~~v~i 64 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNG-KVSNLTQFLINHSGY-PGTCVEI 64 (306)
T ss_pred CCCCEEEECCCCcccCCc-hHHHHHHHHHhCCCC-CeEEEEE
Confidence 478999999999987765 556666766522 44 3333434
No 314
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=23.81 E-value=81 Score=27.64 Aligned_cols=20 Identities=25% Similarity=0.051 Sum_probs=17.4
Q ss_pred eEEEEEechhHHHHHHHHHh
Q 025145 121 KVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 121 ~i~l~G~S~Gg~~a~~~~~~ 140 (257)
+-+++|||+|=+.|+..+--
T Consensus 266 Pdav~GHSlGE~aAa~aAGv 285 (538)
T TIGR02816 266 PDFALGYSKGEASMWASLGV 285 (538)
T ss_pred CCEEeecCHHHHHHHHHhCC
Confidence 67999999999999988763
No 315
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=23.42 E-value=1.9e+02 Score=23.22 Aligned_cols=41 Identities=15% Similarity=0.015 Sum_probs=27.0
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhc
Q 025145 101 GLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
.+.+.+++.....--...++++.++|.|-|=.++.+++...
T Consensus 23 nV~~QI~y~k~~gp~~ngPKkVLviGaSsGyGLa~RIsaaF 63 (398)
T COG3007 23 NVLQQIDYVKAAGPIKNGPKKVLVIGASSGYGLAARISAAF 63 (398)
T ss_pred HHHHHHHHHHhcCCccCCCceEEEEecCCcccHHHHHHHHh
Confidence 34444444433332233456999999999999999888753
No 316
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=23.29 E-value=1.6e+02 Score=20.66 Aligned_cols=18 Identities=33% Similarity=0.086 Sum_probs=16.0
Q ss_pred eEEEEEechhHHHHHHHH
Q 025145 121 KVGIGGFSMGAAVALYSA 138 (257)
Q Consensus 121 ~i~l~G~S~Gg~~a~~~~ 138 (257)
.-.+.|.|.|+.++..++
T Consensus 29 ~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 29 VTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCEEEEEcHHHHHHHHHh
Confidence 557899999999999987
No 317
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=23.26 E-value=61 Score=26.36 Aligned_cols=18 Identities=33% Similarity=0.279 Sum_probs=15.4
Q ss_pred EEEEEechhHHHHHHHHH
Q 025145 122 VGIGGFSMGAAVALYSAT 139 (257)
Q Consensus 122 i~l~G~S~Gg~~a~~~~~ 139 (257)
-+++|||+|=+.|+.++.
T Consensus 126 ~~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 126 DVCAGLSLGEYTALVFAG 143 (343)
T ss_pred CeeeeccHHHHHHHHHhC
Confidence 468999999999988875
No 318
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=23.05 E-value=2.4e+02 Score=18.79 Aligned_cols=73 Identities=18% Similarity=-0.001 Sum_probs=40.4
Q ss_pred EEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhcc
Q 025145 36 TIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLST 115 (257)
Q Consensus 36 ~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (257)
.||.-|| .-+.......+.+....-.+.+.+.+. ..+..+....+.+.++.
T Consensus 3 ili~sHG--~~A~gi~~~~~~i~G~~~~i~~~~~~~---------------------------~~~~~~~~~~i~~~i~~ 53 (122)
T cd00006 3 IIIATHG--GFASGLLNSAEMILGEQENVEAIDFPP---------------------------GESPDDLLEKIKAALAE 53 (122)
T ss_pred EEEEcCH--HHHHHHHHHHHHhcCCCCCeEEEEeCC---------------------------CCCHHHHHHHHHHHHHH
Confidence 6888999 444555666666653223444444220 11234445555555555
Q ss_pred CCCCceEEEEEechhHHHHHHH
Q 025145 116 EPADVKVGIGGFSMGAAVALYS 137 (257)
Q Consensus 116 ~~~~~~i~l~G~S~Gg~~a~~~ 137 (257)
....+.+.++--=+||......
T Consensus 54 ~~~~~~viil~Dl~GGSp~n~~ 75 (122)
T cd00006 54 LDSGEGVLILTDLFGGSPNNAA 75 (122)
T ss_pred hCCCCcEEEEEeCCCCCHHHHH
Confidence 4333477777777788775543
No 319
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=23.00 E-value=75 Score=25.99 Aligned_cols=18 Identities=33% Similarity=0.344 Sum_probs=16.1
Q ss_pred EEEEechhHHHHHHHHHh
Q 025145 123 GIGGFSMGAAVALYSATC 140 (257)
Q Consensus 123 ~l~G~S~Gg~~a~~~~~~ 140 (257)
.+.|-|.||.+|+.++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 689999999999999863
No 320
>PF09757 Arb2: Arb2 domain; InterPro: IPR019154 The fission yeast Argonaute siRNA chaperone (ARC) complex contains the Argonaute protein Ago1 and two previously uncharacterised proteins, Arb1 and Arb2, both of which are required for histone H3 Lys9 (H3-K9) methylation, heterochromatin assembly and siRNA generation []. This entry represents a region found in both Arb2 and the Hda1 protein. ; PDB: 2VQV_A 2VQO_A 2VQJ_A 2VQQ_B 2VQM_A 2VQW_G.
Probab=22.68 E-value=28 Score=25.24 Aligned_cols=39 Identities=15% Similarity=0.014 Sum_probs=0.0
Q ss_pred CCceEEEEEccCCCCcc------------chHH-HhhcCCCCceEEEccCCC
Q 025145 32 KHQATIVWLHGLGDNGS------------SWSQ-LLESLPLPNIKWICPTAP 70 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~------------~~~~-~~~~l~~~g~~v~~~d~~ 70 (257)
.....||++||.|.-.. .... +++...+.||.|+.++.+
T Consensus 97 ~~~~llViih~~g~~wa~~~~~~~~l~~gs~~~~~i~~A~~~~~gVI~~N~~ 148 (178)
T PF09757_consen 97 TAKKLLVIIHGSGVIWARRLIINGGLDSGSQIPQYIKWALKEGYGVIDLNPN 148 (178)
T ss_dssp ----------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 45679999999765110 0112 444445678888887754
No 321
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=22.47 E-value=79 Score=25.01 Aligned_cols=18 Identities=33% Similarity=0.224 Sum_probs=16.4
Q ss_pred EEEEechhHHHHHHHHHh
Q 025145 123 GIGGFSMGAAVALYSATC 140 (257)
Q Consensus 123 ~l~G~S~Gg~~a~~~~~~ 140 (257)
.++|-|.||.+|+.++..
T Consensus 37 ~i~GTSaGaiia~~la~g 54 (288)
T cd07213 37 LFAGTSAGSLIALGLALG 54 (288)
T ss_pred EEEEeCHHHHHHHHHHcC
Confidence 799999999999999874
No 322
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=21.45 E-value=1.1e+02 Score=21.84 Aligned_cols=15 Identities=20% Similarity=0.348 Sum_probs=10.7
Q ss_pred CCceEEEEEechhHH
Q 025145 118 ADVKVGIGGFSMGAA 132 (257)
Q Consensus 118 ~~~~i~l~G~S~Gg~ 132 (257)
.+++|.|+|.|++..
T Consensus 102 ~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 102 SPKKISLVGCSLADN 116 (157)
T ss_dssp -ESEEEEESSS-S-T
T ss_pred CCCEEEEEEecccCC
Confidence 346999999999988
No 323
>PRK04148 hypothetical protein; Provisional
Probab=21.04 E-value=2.6e+02 Score=19.35 Aligned_cols=33 Identities=21% Similarity=0.041 Sum_probs=22.3
Q ss_pred HHHHHHHhccCCCCceEEEEEechhHHHHHHHHH
Q 025145 106 AAHIANLLSTEPADVKVGIGGFSMGAAVALYSAT 139 (257)
Q Consensus 106 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~ 139 (257)
.+.+.+.+.... ..++..+|.-.|..+|..++.
T Consensus 5 ~~~l~~~~~~~~-~~kileIG~GfG~~vA~~L~~ 37 (134)
T PRK04148 5 AEFIAENYEKGK-NKKIVELGIGFYFKVAKKLKE 37 (134)
T ss_pred HHHHHHhccccc-CCEEEEEEecCCHHHHHHHHH
Confidence 444545443332 248999999988888888875
No 324
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=20.90 E-value=1.2e+02 Score=25.72 Aligned_cols=31 Identities=26% Similarity=0.204 Sum_probs=21.5
Q ss_pred HHHHhccCCCCceEEEEEechhHHHHHHHHHhc
Q 025145 109 IANLLSTEPADVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 109 ~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
+..+.++... +=++.|-|.|+.+|..++.+.
T Consensus 92 LkaL~E~gl~--p~vIsGTSaGAivAal~as~~ 122 (421)
T cd07230 92 LKALFEANLL--PRIISGSSAGSIVAAILCTHT 122 (421)
T ss_pred HHHHHHcCCC--CCEEEEECHHHHHHHHHHcCC
Confidence 3344444333 337999999999999988753
No 325
>COG3933 Transcriptional antiterminator [Transcription]
Probab=20.13 E-value=4.8e+02 Score=22.40 Aligned_cols=76 Identities=17% Similarity=0.152 Sum_probs=45.4
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025145 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
+.-.+||..||.. ++.+...++..|- ..--+.++|+|. + ....+..+.+.+
T Consensus 107 ~~v~vIiiAHG~s-TASSmaevanrLL-~~~~~~aiDMPL---------------d------------vsp~~vle~l~e 157 (470)
T COG3933 107 PRVKVIIIAHGYS-TASSMAEVANRLL-GEEIFIAIDMPL---------------D------------VSPSDVLEKLKE 157 (470)
T ss_pred CceeEEEEecCcc-hHHHHHHHHHHHh-hccceeeecCCC---------------c------------CCHHHHHHHHHH
Confidence 3345999999954 4445566666664 345677888872 2 233566677777
Q ss_pred HhccCCCCceEEEEEechhHHHHHHH
Q 025145 112 LLSTEPADVKVGIGGFSMGAAVALYS 137 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~Gg~~a~~~ 137 (257)
.+++.... +=.++=-.||...++.-
T Consensus 158 ~~k~~~~~-~GlllLVDMGSL~~f~~ 182 (470)
T COG3933 158 YLKERDYR-SGLLLLVDMGSLTSFGS 182 (470)
T ss_pred HHHhcCcc-CceEEEEecchHHHHHH
Confidence 77664333 32333347887766543
No 326
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=20.07 E-value=1.8e+02 Score=25.26 Aligned_cols=40 Identities=18% Similarity=0.170 Sum_probs=32.9
Q ss_pred CCceEEEEEccCCCCccc--hHHHhhcCCCCceEEEccCCCC
Q 025145 32 KHQATIVWLHGLGDNGSS--WSQLLESLPLPNIKWICPTAPT 71 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~~ 71 (257)
...|+||.+-|+.+++.. ...+...|...|+.|.++..|.
T Consensus 37 ~~~~vlIv~eG~DaaGKg~~I~~l~~~ldprg~~v~~~~~P~ 78 (493)
T TIGR03708 37 AGFPVIILIEGWDGAGKGETINLLNEWMDPRGIETHAFGRPS 78 (493)
T ss_pred cCCeEEEEEeCCCCCChHHHHHHHHHHhCcCccEEEeCCCCC
Confidence 356899999998776654 6778899999999999998774
Done!