Query 025146
Match_columns 257
No_of_seqs 120 out of 624
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 04:38:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025146.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025146hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3p0t_A Uncharacterized protein 77.4 2.7 9.2E-05 33.0 4.5 41 186-226 24-65 (138)
2 3ksv_A Uncharacterized protein 75.9 3 0.0001 33.6 4.4 41 186-226 30-71 (149)
3 3o0m_A HIT family protein; ssg 72.7 5.2 0.00018 31.8 5.1 41 186-226 24-65 (149)
4 3lb5_A HIT-like protein involv 72.5 5 0.00017 32.7 5.1 40 186-225 47-87 (161)
5 1fit_A FragIle histidine prote 72.0 4.3 0.00015 32.1 4.4 41 186-226 18-59 (147)
6 3imi_A HIT family protein; str 71.6 4.7 0.00016 32.0 4.6 40 186-225 28-68 (147)
7 2eo4_A 150AA long hypothetical 71.0 4.7 0.00016 32.0 4.4 41 186-226 18-59 (149)
8 3l7x_A SMU.412C, putative HIT- 69.5 5.2 0.00018 33.1 4.6 41 186-226 55-96 (173)
9 2oik_A Histidine triad (HIT) p 68.3 6.1 0.00021 31.5 4.6 40 186-225 25-65 (154)
10 1y23_A HIT, histidine triad pr 67.6 4.1 0.00014 32.0 3.4 40 186-225 24-64 (145)
11 3n1s_A HIT-like protein HINT; 65.4 6.5 0.00022 30.1 4.1 35 186-220 22-57 (119)
12 3r6f_A HIT family protein; str 64.8 2.7 9.1E-05 33.0 1.7 37 186-222 23-60 (135)
13 3oj7_A Putative histidine tria 63.3 4 0.00014 31.0 2.4 35 186-220 26-61 (117)
14 4egu_A Histidine triad (HIT) p 62.6 4.2 0.00014 30.9 2.5 35 186-220 23-58 (119)
15 3o1c_A Histidine triad nucleot 54.7 7.6 0.00026 30.0 2.7 36 186-221 34-70 (126)
16 1xqu_A HIT family hydrolase; p 51.6 7.2 0.00025 31.3 2.2 35 186-220 54-89 (147)
17 3ano_A AP-4-A phosphorylase; d 49.1 21 0.00071 30.7 4.9 40 186-225 89-129 (218)
18 3d31_C Sulfate/molybdate ABC t 43.7 1.5E+02 0.0052 25.3 9.7 39 95-133 94-134 (295)
19 2onk_C Molybdate/tungstate ABC 40.0 88 0.003 26.7 7.6 41 94-134 83-125 (284)
20 1ems_A Nitfhit, NIT-fragIle hi 39.1 28 0.00097 32.0 4.4 42 185-226 313-355 (440)
21 1gup_A Galactose-1-phosphate u 36.0 34 0.0011 31.1 4.4 38 186-223 215-253 (348)
22 3i24_A HIT family hydrolase; s 30.1 55 0.0019 26.2 4.3 39 187-225 19-58 (149)
23 2rdd_B UPF0092 membrane protei 29.5 31 0.0011 21.4 2.1 18 55-72 2-19 (37)
24 3ohe_A Histidine triad (HIT) p 29.3 57 0.002 25.5 4.2 39 187-225 19-58 (137)
25 3tx3_A Uncharacterized protein 28.3 2.9E+02 0.0099 23.8 10.7 13 57-69 32-44 (249)
26 1q90_G Cytochrome B6F complex 23.4 87 0.003 19.8 3.3 22 93-114 6-27 (37)
27 3i4s_A Histidine triad protein 23.1 92 0.0032 24.8 4.4 38 188-226 25-64 (149)
28 1z84_A Galactose-1-phosphate u 21.2 90 0.0031 28.3 4.4 37 186-222 230-267 (351)
No 1
>3p0t_A Uncharacterized protein; ssgcid, HIT-like protein, mycobacerium paratuberculosis, STR genomics; 1.90A {Mycobacterium avium subsp}
Probab=77.45 E-value=2.7 Score=32.97 Aligned_cols=41 Identities=12% Similarity=0.201 Sum_probs=34.4
Q ss_pred CCCeEEEEecCCCCCCceEEEEecCCeecC-CCCHHHHHHHH
Q 025146 186 DEELCSVYVPTNHLYIGDIFLVNSEEIIRP-NLSVREGIEII 226 (257)
Q Consensus 186 ~~~~v~VfvPtsPptsG~l~~Vp~~~V~~l-DmsvEeAmk~i 226 (257)
+++.+.+|++-.|.+-|.++++|++-+..+ |++.|+...+.
T Consensus 24 e~~~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~ 65 (138)
T 3p0t_A 24 EDDDVVAFLTIEPMTQGHTLVVPREEIDNWQDVDSAAFNRVM 65 (138)
T ss_dssp ECSSEEEEECSSCSSTTCEEEEESSCCCCGGGSCHHHHHHHH
T ss_pred eCCCEEEEecCCCCCCcEEEEEEhHHhCchhhCCHHHHHHHH
Confidence 467889999999988999999999998776 89988766544
No 2
>3ksv_A Uncharacterized protein; HIT family, structural genomics, structural genomics of PATH protozoa consortium, SGPP, unknown function; 1.90A {Leishmania major} SCOP: d.13.1.0
Probab=75.95 E-value=3 Score=33.57 Aligned_cols=41 Identities=12% Similarity=0.250 Sum_probs=34.8
Q ss_pred CCCeEEEEecCCCCCCceEEEEecCCeecC-CCCHHHHHHHH
Q 025146 186 DEELCSVYVPTNHLYIGDIFLVNSEEIIRP-NLSVREGIEII 226 (257)
Q Consensus 186 ~~~~v~VfvPtsPptsG~l~~Vp~~~V~~l-DmsvEeAmk~i 226 (257)
+++.+.+|+|-.|.+-|.++++|++.+..+ |++-||...+.
T Consensus 30 ed~~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~ 71 (149)
T 3ksv_A 30 ETSKALAFMDINPLSRGHMLVIPKEHASCLHELGMEDAADVG 71 (149)
T ss_dssp ECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHH
T ss_pred ECCCEEEEECCCCCCCCEEEEEeChhhhhhhhCCHHHHHHHH
Confidence 467889999999988999999999999776 89988866554
No 3
>3o0m_A HIT family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, hydrola structural genomics; HET: AMP; 1.90A {Mycobacterium smegmatis str}
Probab=72.74 E-value=5.2 Score=31.85 Aligned_cols=41 Identities=5% Similarity=0.050 Sum_probs=34.1
Q ss_pred CCCeEEEEecCCCCCCceEEEEecCCeecC-CCCHHHHHHHH
Q 025146 186 DEELCSVYVPTNHLYIGDIFLVNSEEIIRP-NLSVREGIEII 226 (257)
Q Consensus 186 ~~~~v~VfvPtsPptsG~l~~Vp~~~V~~l-DmsvEeAmk~i 226 (257)
+++.+.+|+|-.|.+-|.++++|++.+..+ |++.|+...+.
T Consensus 24 e~~~~~af~d~~p~~pgh~lViPk~H~~~l~dl~~~~~~~l~ 65 (149)
T 3o0m_A 24 EDENFLGILDIRPFTRGHTLVIPKTHTVDLTDTPPETVAGMA 65 (149)
T ss_dssp ECSSEEEEECSSCSSTTCEEEEESSCCCSTTTSCHHHHHHHH
T ss_pred ECCCEEEEEcCCCCCCCeEEEEechhhCCHhHCCHHHHHHHH
Confidence 467889999999988999999999999776 89988765443
No 4
>3lb5_A HIT-like protein involved in cell-cycle regulatio; niaid, seattle structural genomics center for infectious DIS ssgcid, histidine triad; 1.90A {Bartonella henselae}
Probab=72.54 E-value=5 Score=32.66 Aligned_cols=40 Identities=3% Similarity=0.051 Sum_probs=33.9
Q ss_pred CCCeEEEEecCCCCCCceEEEEecCCeecC-CCCHHHHHHH
Q 025146 186 DEELCSVYVPTNHLYIGDIFLVNSEEIIRP-NLSVREGIEI 225 (257)
Q Consensus 186 ~~~~v~VfvPtsPptsG~l~~Vp~~~V~~l-DmsvEeAmk~ 225 (257)
+++.+.+|+|-.|.+-|.++++|++-+..+ |++-|+...+
T Consensus 47 e~e~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~ee~~~l 87 (161)
T 3lb5_A 47 EDDDVIAFMDIMPQAPGHTLVIPKKGSRNLLDADTETLFPV 87 (161)
T ss_dssp ECSSEEEEECSSCSSTTCEEEEESSCCSSTTTSCHHHHHHH
T ss_pred ECCCEEEEECCCcCCCcEEEEEEeeccchhhhCCHHHHHHH
Confidence 467889999999988899999999999776 8998886543
No 5
>1fit_A FragIle histidine protein; FHIT, fragIle histidine triad protein, putative human tumor suppressor, advanced photon source, APS; HET: FRU; 1.85A {Homo sapiens} SCOP: d.13.1.1 PDB: 1fhi_A* 2fit_A* 3fit_A* 4fit_A 5fit_A* 6fit_A* 2fhi_A*
Probab=72.00 E-value=4.3 Score=32.09 Aligned_cols=41 Identities=17% Similarity=0.225 Sum_probs=34.6
Q ss_pred CCCeEEEEecCCCCCCceEEEEecCCeecC-CCCHHHHHHHH
Q 025146 186 DEELCSVYVPTNHLYIGDIFLVNSEEIIRP-NLSVREGIEII 226 (257)
Q Consensus 186 ~~~~v~VfvPtsPptsG~l~~Vp~~~V~~l-DmsvEeAmk~i 226 (257)
+++.+.+|++-.|.+-|.++++|++.+..+ |++.||...+.
T Consensus 18 e~~~~~a~~d~~p~~pgh~LViPk~h~~~~~dL~~~e~~~l~ 59 (147)
T 1fit_A 18 KTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLF 59 (147)
T ss_dssp ECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHH
T ss_pred ECCCEEEEECCCCCCCcEEEEEEccccCChhhCCHHHHHHHH
Confidence 468899999999988999999999998776 89988765544
No 6
>3imi_A HIT family protein; structural genomics, infectious diseases for structural genomics of infectious diseases, unknown FUN csgid; 2.01A {Bacillus anthracis str} SCOP: d.13.1.1
Probab=71.56 E-value=4.7 Score=32.02 Aligned_cols=40 Identities=10% Similarity=0.159 Sum_probs=33.8
Q ss_pred CCCeEEEEecCCCCCCceEEEEecCCeecC-CCCHHHHHHH
Q 025146 186 DEELCSVYVPTNHLYIGDIFLVNSEEIIRP-NLSVREGIEI 225 (257)
Q Consensus 186 ~~~~v~VfvPtsPptsG~l~~Vp~~~V~~l-DmsvEeAmk~ 225 (257)
+++.+.+|+|-.|.+-|.++++|++.+..+ |++.|+...+
T Consensus 28 e~~~~~a~~d~~p~~pgh~lViPk~H~~~l~dL~~~e~~~l 68 (147)
T 3imi_A 28 EDEHVLAFLDISQVTKGHTLVIPKVHKQDIFALTPEIASHI 68 (147)
T ss_dssp ECSSEEEEECTTCSSTTCEEEEESSCCCSGGGCCHHHHHHH
T ss_pred ECCCEEEEEcCCCCCCcEEEEEEeeccCChhhCCHHHHHHH
Confidence 467889999999988999999999998776 8998876544
No 7
>2eo4_A 150AA long hypothetical histidine triad nucleotid protein; HIT family, structural genomics, NPPSFA; 1.80A {Sulfolobus tokodaii}
Probab=70.98 E-value=4.7 Score=31.96 Aligned_cols=41 Identities=7% Similarity=0.131 Sum_probs=34.4
Q ss_pred CCCeEEEEecCCCCCCceEEEEecCCeecC-CCCHHHHHHHH
Q 025146 186 DEELCSVYVPTNHLYIGDIFLVNSEEIIRP-NLSVREGIEII 226 (257)
Q Consensus 186 ~~~~v~VfvPtsPptsG~l~~Vp~~~V~~l-DmsvEeAmk~i 226 (257)
+++.+.+|+|-.|.+-|.++++|++-+..+ |++.||...+.
T Consensus 18 e~~~~~a~~d~~p~~pgh~lViPk~H~~~~~dL~~~e~~~l~ 59 (149)
T 2eo4_A 18 EDEKFAAILDKYPVSLGHTLVIPKKHFENYLEADEDTLAELA 59 (149)
T ss_dssp ECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHH
T ss_pred ECCCEEEEECCCCCCCCeEEEEechhhCCHhHCCHHHHHHHH
Confidence 467889999999988899999999998776 89988766554
No 8
>3l7x_A SMU.412C, putative HIT-like protein involved in cell-cycle regulation; 1.70A {Streptococcus mutans}
Probab=69.47 E-value=5.2 Score=33.09 Aligned_cols=41 Identities=7% Similarity=0.269 Sum_probs=34.1
Q ss_pred CCCeEEEEecCCCCCCceEEEEecCCeecC-CCCHHHHHHHH
Q 025146 186 DEELCSVYVPTNHLYIGDIFLVNSEEIIRP-NLSVREGIEII 226 (257)
Q Consensus 186 ~~~~v~VfvPtsPptsG~l~~Vp~~~V~~l-DmsvEeAmk~i 226 (257)
+++.+.+|+|-.|.+-|.++++|++.+..+ |++-|+...+.
T Consensus 55 e~e~~~afld~~P~~pgH~LVIPkrHv~~l~dL~~ee~~~L~ 96 (173)
T 3l7x_A 55 EDEDVLAFLDISQATKGHTLVIPKEHVRNALEMTQTQAANLF 96 (173)
T ss_dssp ECSSEEEEECTTCSSTTCEEEEESSCCSCGGGCCHHHHHHHH
T ss_pred ECCCEEEEEcCCCCCCcEEEEEeccccCChhhCCHHHHHHHH
Confidence 467889999999988999999999998765 89988765443
No 9
>2oik_A Histidine triad (HIT) protein; HIT-like fold, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.65A {Methylobacillus flagellatus} SCOP: d.13.1.1
Probab=68.30 E-value=6.1 Score=31.51 Aligned_cols=40 Identities=20% Similarity=0.247 Sum_probs=33.6
Q ss_pred CCCeEEEEecCCCCCCceEEEEecCCeecC-CCCHHHHHHH
Q 025146 186 DEELCSVYVPTNHLYIGDIFLVNSEEIIRP-NLSVREGIEI 225 (257)
Q Consensus 186 ~~~~v~VfvPtsPptsG~l~~Vp~~~V~~l-DmsvEeAmk~ 225 (257)
+++.+.+|+|-.|.+-|.++++|++-+..+ |++-||...+
T Consensus 25 e~~~~~a~~d~~p~~pgh~LViPk~H~~~l~dL~~~~~~~l 65 (154)
T 2oik_A 25 QDALCRVVHVENQDYPGFCRVILNRHVKEMSDLRPAERDHL 65 (154)
T ss_dssp ECSSEEEEECCCTTCTTCEEEEESSCCSCGGGSCHHHHHHH
T ss_pred ECCcEEEEEcCCCCCCeEEEEEecCCcCChHHCCHHHHHHH
Confidence 467889999999988999999999999776 8998886443
No 10
>1y23_A HIT, histidine triad protein; HIT protein, PKCI-1, cell-cycle regulation, NYSGXRC, structural genomics, protein structure initiative; 2.30A {Bacillus subtilis} SCOP: d.13.1.1
Probab=67.61 E-value=4.1 Score=31.98 Aligned_cols=40 Identities=8% Similarity=0.183 Sum_probs=33.3
Q ss_pred CCCeEEEEecCCCCCCceEEEEecCCeecC-CCCHHHHHHH
Q 025146 186 DEELCSVYVPTNHLYIGDIFLVNSEEIIRP-NLSVREGIEI 225 (257)
Q Consensus 186 ~~~~v~VfvPtsPptsG~l~~Vp~~~V~~l-DmsvEeAmk~ 225 (257)
.++.+.+|+|-.|.+-|.++++|++.+..+ |++-||...+
T Consensus 24 e~~~~~a~~~~~p~~pgh~LViPk~h~~~l~dL~~~~~~~l 64 (145)
T 1y23_A 24 EDEHVLAFLDISQVTKGHTLVIPKTHIENVYEFTDELAKQY 64 (145)
T ss_dssp ECSSEEEEECTTCSSTTCEEEEESSCCSSGGGCCHHHHHTT
T ss_pred ECCCEEEEECCCCCCCCeEEEEEhhhhhhHHhCCHHHHHHH
Confidence 467889999999988899999999998776 8888876443
No 11
>3n1s_A HIT-like protein HINT; histidine triad nucleotide binding protein, GMP, hydro; HET: 5GP; 1.45A {Escherichia coli} SCOP: d.13.1.0 PDB: 3n1t_A*
Probab=65.36 E-value=6.5 Score=30.08 Aligned_cols=35 Identities=11% Similarity=0.182 Sum_probs=30.3
Q ss_pred CCCeEEEEecCCCCCCceEEEEecCCeecC-CCCHH
Q 025146 186 DEELCSVYVPTNHLYIGDIFLVNSEEIIRP-NLSVR 220 (257)
Q Consensus 186 ~~~~v~VfvPtsPptsG~l~~Vp~~~V~~l-DmsvE 220 (257)
+++.+.+|++-.|.+-|.++++|++-+..+ |++-|
T Consensus 22 ede~~~af~d~~P~~pgH~LViPk~Hv~~l~dL~~~ 57 (119)
T 3n1s_A 22 QDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAE 57 (119)
T ss_dssp ECSSEEEEECSSCSSSEEEEEEESSCCCSGGGCCGG
T ss_pred ECCCEEEEECCCCCCCCeEEEEehhHhCCHhHcCHH
Confidence 467889999999988999999999999776 88877
No 12
>3r6f_A HIT family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, protozoan parasite; 1.85A {Encephalitozoon cuniculi}
Probab=64.76 E-value=2.7 Score=33.03 Aligned_cols=37 Identities=11% Similarity=0.055 Sum_probs=31.5
Q ss_pred CCCeEEEEecCCCCCCceEEEEecCCeecC-CCCHHHH
Q 025146 186 DEELCSVYVPTNHLYIGDIFLVNSEEIIRP-NLSVREG 222 (257)
Q Consensus 186 ~~~~v~VfvPtsPptsG~l~~Vp~~~V~~l-DmsvEeA 222 (257)
+++.+.+|+|-.|.+-|.++++|++.+..+ |++.|+.
T Consensus 23 e~~~~~af~d~~p~~pgh~lViPk~H~~~l~dL~~~~~ 60 (135)
T 3r6f_A 23 ETDRLFALIDRYPLSKGHFLVIPKAHHPYLHNYKPEEL 60 (135)
T ss_dssp ECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCGGGG
T ss_pred ECCCEEEEECCCCCCCCeEEEEEhhHhCCHhHCCHHHH
Confidence 578899999999988999999999998765 7887764
No 13
>3oj7_A Putative histidine triad family protein; hydrolase, structural genomics, seattle structural genomics for infectious disease, ssgcid; 1.40A {Entamoeba histolytica} SCOP: d.13.1.0 PDB: 3omf_A* 3oxk_A*
Probab=63.25 E-value=4 Score=31.02 Aligned_cols=35 Identities=9% Similarity=0.162 Sum_probs=29.3
Q ss_pred CCCeEEEEecCCCCCCceEEEEecCCeecC-CCCHH
Q 025146 186 DEELCSVYVPTNHLYIGDIFLVNSEEIIRP-NLSVR 220 (257)
Q Consensus 186 ~~~~v~VfvPtsPptsG~l~~Vp~~~V~~l-DmsvE 220 (257)
+++.+.+|++-.|-+-|.++++|++-+..+ |++-|
T Consensus 26 e~~~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~ 61 (117)
T 3oj7_A 26 EDDEIFAFKDINPIAPIHILVIPKQHIASLNEITEE 61 (117)
T ss_dssp ECSSEEEEECSSCSSSEEEEEEESSCCCSGGGCCTT
T ss_pred ECCcEEEEECCCCCCCceEEEEechHhCCHHHCCHH
Confidence 467889999999988999999999998765 77654
No 14
>4egu_A Histidine triad (HIT) protein; structural genomics, center for structural genomics of infec diseases, csgid, HIT domain, unknown function; HET: 5GP; 0.95A {Clostridium difficile}
Probab=62.58 E-value=4.2 Score=30.92 Aligned_cols=35 Identities=9% Similarity=0.108 Sum_probs=29.8
Q ss_pred CCCeEEEEecCCCCCCceEEEEecCCeecC-CCCHH
Q 025146 186 DEELCSVYVPTNHLYIGDIFLVNSEEIIRP-NLSVR 220 (257)
Q Consensus 186 ~~~~v~VfvPtsPptsG~l~~Vp~~~V~~l-DmsvE 220 (257)
+++.+.+|+|-.|-+-|-++++|++-+..+ |++-|
T Consensus 23 e~e~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~ 58 (119)
T 4egu_A 23 EDDRVLAFNDLNPVAPYHILVVPKKHYDSLIDIPDK 58 (119)
T ss_dssp ECSSEEEEECSSCSSSEEEEEEESSCCSSGGGSCGG
T ss_pred ECCCEEEEECCCCCCCceEEEEechhhCCHhHCCHh
Confidence 467889999999988999999999998765 77765
No 15
>3o1c_A Histidine triad nucleotide-binding protein 1; hydrolase, HINT protein, HIT protein, adenosine 5'- monophosphoramidase; HET: ADN; 1.08A {Oryctolagus cuniculus} SCOP: d.13.1.1 PDB: 3llj_A* 1rzy_A* 3qgz_A* 3o1z_A 3o1x_A* 4eqe_A* 4eqg_A* 4eqh_A* 3tw2_A* 1kpb_A 1kpf_A* 1kpa_A 1kpc_A 1av5_A* 1kpe_A* 4rhn_A* 3rhn_A* 5rhn_A* 6rhn_A
Probab=54.74 E-value=7.6 Score=29.97 Aligned_cols=36 Identities=3% Similarity=0.069 Sum_probs=30.3
Q ss_pred CCCeEEEEecCCCCCCceEEEEecCCeecC-CCCHHH
Q 025146 186 DEELCSVYVPTNHLYIGDIFLVNSEEIIRP-NLSVRE 221 (257)
Q Consensus 186 ~~~~v~VfvPtsPptsG~l~~Vp~~~V~~l-DmsvEe 221 (257)
+++.+.+|++-.|.+-|-++++|++-+..+ |++-||
T Consensus 34 e~e~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e 70 (126)
T 3o1c_A 34 EDDQALAFHDISPQAPTHFLVIPKKHISQISAAEDAD 70 (126)
T ss_dssp ECSSEEEEECSSCSSSEEEEEEESSCCCCGGGCCGGG
T ss_pred ECCCEEEEECCCCCCCceEEEEechHhchHhhCchhH
Confidence 467889999999988999999999998765 777654
No 16
>1xqu_A HIT family hydrolase; protein STRU initiative, PSI, southeast collaboratory for structural GEN secsg; 2.30A {Clostridium thermocellum} SCOP: d.13.1.1
Probab=51.56 E-value=7.2 Score=31.30 Aligned_cols=35 Identities=11% Similarity=0.132 Sum_probs=29.2
Q ss_pred CCCeEEEEecCCCCCCceEEEEecCCeecC-CCCHH
Q 025146 186 DEELCSVYVPTNHLYIGDIFLVNSEEIIRP-NLSVR 220 (257)
Q Consensus 186 ~~~~v~VfvPtsPptsG~l~~Vp~~~V~~l-DmsvE 220 (257)
+++.+.+|+|-.|.+-|-++++|++-+..+ |++-|
T Consensus 54 e~e~~~af~d~~P~~pgH~LViPkrHv~~l~dL~~~ 89 (147)
T 1xqu_A 54 EDERVIAIKDINPAAPVHVLIIPKEHIANVKEINES 89 (147)
T ss_dssp ECSSEEEEECSSCSSSEEEEEEESSCCSSGGGCCTT
T ss_pred ECCcEEEEEecCCCCccEEEEEeCcccCChhHCCHH
Confidence 467899999999988999999999988765 66543
No 17
>3ano_A AP-4-A phosphorylase; diadenosine polyphosphate, HIT transferase; HET: PG4; 1.89A {Mycobacterium tuberculosis}
Probab=49.11 E-value=21 Score=30.69 Aligned_cols=40 Identities=15% Similarity=0.173 Sum_probs=33.2
Q ss_pred CCCeEEEEecCCCCCCceEEEEecCCeecC-CCCHHHHHHH
Q 025146 186 DEELCSVYVPTNHLYIGDIFLVNSEEIIRP-NLSVREGIEI 225 (257)
Q Consensus 186 ~~~~v~VfvPtsPptsG~l~~Vp~~~V~~l-DmsvEeAmk~ 225 (257)
.++.+.+|++-.|-+-|.++++|++-+..+ |++-||...+
T Consensus 89 edd~~~afld~~P~~pGH~LVIPkrHv~~l~dL~~ee~~~L 129 (218)
T 3ano_A 89 RGKLVYAVLNLYPYNPGHLMVVPYRRVSELEDLTDLESAEL 129 (218)
T ss_dssp ECSSEEEEECSSCSSTTCEEEEESSCCCCGGGSCHHHHHHH
T ss_pred ECCcEEEEEccCCCCCcEEEEEechhhCChhhCCHHHHHHH
Confidence 467899999988877999999999998776 8998875443
No 18
>3d31_C Sulfate/molybdate ABC transporter, permease protein; ATP-binding, nucleotide-binding, membrane, transmembrane, transport protein; 3.00A {Methanosarcina acetivorans} SCOP: f.58.1.1
Probab=43.72 E-value=1.5e+02 Score=25.31 Aligned_cols=39 Identities=13% Similarity=-0.017 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHHH--hhHHHHHHHHHHHhcccccch
Q 025146 95 GFLTSILFIFFVGVFASS--WLGATVFWLGEWFIKRLPFMK 133 (257)
Q Consensus 95 glli~llli~liG~La~~--~~g~~l~~~~e~ll~rIPlvk 133 (257)
+.++.+++-+.+|++..+ ..+++++..+=.+..-+|.+-
T Consensus 94 ~~~l~~~lg~~~a~~l~~~~~~~~~~~~~~~~~~~~iP~~v 134 (295)
T 3d31_C 94 ATLLALLLGAPTGYILARFDFPGKRLVESIIDVPVVVPHTV 134 (295)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHGGGTSCHHH
T ss_pred HHHHHHHHHHHHHHHHHccCcchHHHHHHHHHHHHHHHHHH
Confidence 344444555566665544 245666665555666677643
No 19
>2onk_C Molybdate/tungstate ABC transporter, permease protein; membrane protein; 3.10A {Archaeoglobus fulgidus} SCOP: f.58.1.1
Probab=39.97 E-value=88 Score=26.67 Aligned_cols=41 Identities=12% Similarity=0.042 Sum_probs=23.5
Q ss_pred hHHHHHHHHHHHHHHHHHH--hhHHHHHHHHHHHhcccccchh
Q 025146 94 LGFLTSILFIFFVGVFASS--WLGATVFWLGEWFIKRLPFMKH 134 (257)
Q Consensus 94 lglli~llli~liG~La~~--~~g~~l~~~~e~ll~rIPlvks 134 (257)
.+.++.+++-+.+|++..+ ..+++++...=.+..-+|.+-.
T Consensus 83 ~~~~l~~~lg~~~a~~l~~~~~~~~~~~~~~~~~~~~iP~~v~ 125 (284)
T 2onk_C 83 ISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVA 125 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCCSSHHHHHHHHHHHHHSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHccCcchHHHHHHHHHHHHHHHHHHH
Confidence 3444555555666666554 2456666665556667776443
No 20
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=39.06 E-value=28 Score=32.04 Aligned_cols=42 Identities=14% Similarity=0.182 Sum_probs=35.0
Q ss_pred CCCCeEEEEecCCCCCCceEEEEecCCeecC-CCCHHHHHHHH
Q 025146 185 GDEELCSVYVPTNHLYIGDIFLVNSEEIIRP-NLSVREGIEII 226 (257)
Q Consensus 185 ~~~~~v~VfvPtsPptsG~l~~Vp~~~V~~l-DmsvEeAmk~i 226 (257)
.+++.+.+|+|-.|.+-|.++++|++.+..+ |++-||...+.
T Consensus 313 ~e~~~~~a~~~~~p~~pgh~lviPk~h~~~~~~l~~~~~~~l~ 355 (440)
T 1ems_A 313 YSTPHSFVFVNLKPVTDGHVLVSPKRVVPRLTDLTDAETADLF 355 (440)
T ss_dssp EECSSEEEEECSSCSSTTCEEEEESSCCSCGGGSCHHHHHHHH
T ss_pred EECCCEEEEEcCCcCCCCeEEEEEccccCChhHCCHHHHHHHH
Confidence 3577899999999988899999999998776 89888765544
No 21
>1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A*
Probab=36.01 E-value=34 Score=31.08 Aligned_cols=38 Identities=16% Similarity=0.183 Sum_probs=32.3
Q ss_pred CCCeEEEEecCCCCCCceEEEEecCCeecC-CCCHHHHH
Q 025146 186 DEELCSVYVPTNHLYIGDIFLVNSEEIIRP-NLSVREGI 223 (257)
Q Consensus 186 ~~~~v~VfvPtsPptsG~l~~Vp~~~V~~l-DmsvEeAm 223 (257)
+++.+.+|+|-.|.+-|-++++|++.+..+ |++-||.-
T Consensus 215 E~e~~~af~~~~p~~pgh~lViPK~Hv~~l~dL~~~e~~ 253 (348)
T 1gup_A 215 ETEHWLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRS 253 (348)
T ss_dssp ECSSEEEECCTTCCSTTCEEEEESSCCSSGGGCCHHHHH
T ss_pred eCCcEEEEEccCCCCceEEEEEeCcccCChHHCCHHHHH
Confidence 467899999999988899999999999776 88877754
No 22
>3i24_A HIT family hydrolase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.50A {Vibrio fischeri ES114}
Probab=30.09 E-value=55 Score=26.15 Aligned_cols=39 Identities=18% Similarity=0.216 Sum_probs=28.7
Q ss_pred CCeEEEEecCCCCCCceEEEEecCCeecC-CCCHHHHHHH
Q 025146 187 EELCSVYVPTNHLYIGDIFLVNSEEIIRP-NLSVREGIEI 225 (257)
Q Consensus 187 ~~~v~VfvPtsPptsG~l~~Vp~~~V~~l-DmsvEeAmk~ 225 (257)
.+.+.||+=-.|.+-|.++++|++.+..+ |++.|++..+
T Consensus 19 ~~~~~v~L~~~p~~pGh~LV~pk~Hv~~l~dL~~e~~~~l 58 (149)
T 3i24_A 19 LPLCKVLLIKEDIGPWLILVPRIEELKEIHHMTDEQQIQF 58 (149)
T ss_dssp CSSEEEEEECBSSTTEEEEEESCTTCSSGGGSCHHHHHHH
T ss_pred CCCEEEEEcCCCCCCEEEEEeCccccCChhHCCHHHHHHH
Confidence 45667777777766688877777788776 8999986543
No 23
>2rdd_B UPF0092 membrane protein YAJC; drug resistance, multidrug efflux, transporter, antiporter, novel transmembrane helix, ACRB, inner membrane; HET: AIC; 3.50A {Escherichia coli}
Probab=29.47 E-value=31 Score=21.40 Aligned_cols=18 Identities=11% Similarity=0.238 Sum_probs=11.9
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 025146 55 GCVVLFPVAVTFLVTWWF 72 (257)
Q Consensus 55 GLlvlLPl~vTi~il~wl 72 (257)
|+..++|+++.+.++|++
T Consensus 2 ~~~~~l~~v~~~~ifYFl 19 (37)
T 2rdd_B 2 PMSLILMLVVFGLIFYFM 19 (37)
T ss_dssp CCHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHH
Confidence 455677777776666654
No 24
>3ohe_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.20A {Marinobacter aquaeolei}
Probab=29.34 E-value=57 Score=25.50 Aligned_cols=39 Identities=15% Similarity=0.226 Sum_probs=29.1
Q ss_pred CCeEEEEecCCCCCCceEEEEecCCeecC-CCCHHHHHHH
Q 025146 187 EELCSVYVPTNHLYIGDIFLVNSEEIIRP-NLSVREGIEI 225 (257)
Q Consensus 187 ~~~v~VfvPtsPptsG~l~~Vp~~~V~~l-DmsvEeAmk~ 225 (257)
.+...||+=-.|.+-|.++++|++.+..+ |++.|++..+
T Consensus 19 ~~~~~v~l~~~p~~pGh~lV~~k~h~~~l~dl~~~~~~~l 58 (137)
T 3ohe_A 19 SRLCDVLLMNDNTWPWVILVPRVSGIREIYELPNEQQQRL 58 (137)
T ss_dssp CSSEEEEEESCTTSCEEEEEESCTTCCSGGGSCHHHHHHH
T ss_pred CCcEEEEEcCCCCCCEEEEEecccccCChHHCCHHHHHHH
Confidence 45667777766766788888887888776 8999986544
No 25
>3tx3_A Uncharacterized protein involved in cysteine BIOS; structural genomics, PSI-biology, NEW YORK consortium on MEM protein structure, nycomps; HET: LDA; 2.30A {Idiomarina loihiensis}
Probab=28.30 E-value=2.9e+02 Score=23.84 Aligned_cols=13 Identities=15% Similarity=0.478 Sum_probs=8.6
Q ss_pred HHHHHHHHHHHHH
Q 025146 57 VVLFPVAVTFLVT 69 (257)
Q Consensus 57 lvlLPl~vTi~il 69 (257)
.+++|+.+++.+.
T Consensus 32 ~vl~Pllinl~L~ 44 (249)
T 3tx3_A 32 YVVVPILTNLILF 44 (249)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3567777777654
No 26
>1q90_G Cytochrome B6F complex subunit PETG; membrane protein complex, photosynthesis, electron transfer, oxydoreductase, chlorophyll; HET: HEM CL1 BCR TDS SQD LFA LMG; 3.10A {Chlamydomonas reinhardtii} SCOP: f.23.26.1
Probab=23.39 E-value=87 Score=19.80 Aligned_cols=22 Identities=18% Similarity=0.480 Sum_probs=17.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHhh
Q 025146 93 GLGFLTSILFIFFVGVFASSWL 114 (257)
Q Consensus 93 glglli~llli~liG~La~~~~ 114 (257)
..|+++.++-+.++|+++..+.
T Consensus 6 L~GIVlGlipvtlaGLfv~Ay~ 27 (37)
T 1q90_G 6 LCGIVLGLVPVTIAGLFVTAYL 27 (37)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHhhHHHHHHHHHHHHHH
Confidence 3578888888999999988764
No 27
>3i4s_A Histidine triad protein; hydrolase, phosphatase, HIT superfamily, PSI-2, NYSGXRC, STR genomics, protein structure initiative; 1.75A {Bradyrhizobium japonicum}
Probab=23.12 E-value=92 Score=24.83 Aligned_cols=38 Identities=16% Similarity=0.221 Sum_probs=25.8
Q ss_pred CeEEEEecCCCCCCceEEEEecC-CeecC-CCCHHHHHHHH
Q 025146 188 ELCSVYVPTNHLYIGDIFLVNSE-EIIRP-NLSVREGIEII 226 (257)
Q Consensus 188 ~~v~VfvPtsPptsG~l~~Vp~~-~V~~l-DmsvEeAmk~i 226 (257)
....||+ ..|++-|.+++||++ -+..+ |++.|++..+.
T Consensus 25 p~~~v~l-~~~~~~~H~LVIPk~~H~~~l~dL~~e~~~~l~ 64 (149)
T 3i4s_A 25 PLSKVLV-IKDANYPWLLLVPRRPDAVEIIDLDEVQQAQLM 64 (149)
T ss_dssp SSEEEEE-ESCTTSCEEEEEECCTTCCSGGGSCHHHHHHHH
T ss_pred CceEEEE-CCCCCCCEEEEEecccccCChhHCCHHHHHHHH
Confidence 3445555 245556678899999 48776 89998875543
No 28
>1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A*
Probab=21.24 E-value=90 Score=28.34 Aligned_cols=37 Identities=11% Similarity=0.134 Sum_probs=31.2
Q ss_pred CCCeEEEEecCCCCCCceEEEEecCCeecC-CCCHHHH
Q 025146 186 DEELCSVYVPTNHLYIGDIFLVNSEEIIRP-NLSVREG 222 (257)
Q Consensus 186 ~~~~v~VfvPtsPptsG~l~~Vp~~~V~~l-DmsvEeA 222 (257)
+++.+.+|+|-.|.+-|-++++|++-+..+ |++-|+.
T Consensus 230 E~e~~~af~~~~p~~P~h~lViPk~Hv~~l~dl~~~e~ 267 (351)
T 1z84_A 230 ESSHFVSVAPFAATYPFEIWIIPKDHSSHFHHLDDVKA 267 (351)
T ss_dssp ECSSEEEEECTTCSSTTCEEEEESSCCSCGGGCCHHHH
T ss_pred cCCcEEEEeccCCCCCeEEEEEeccccCChHHCCHHHH
Confidence 468899999999987889999999998765 7887764
Done!