Query 025146
Match_columns 257
No_of_seqs 120 out of 624
Neff 5.5
Searched_HMMs 13730
Date Mon Mar 25 04:38:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025146.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/025146hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1y23a_ d.13.1.1 (A:) Hit {Bac 73.4 1.5 0.00011 32.5 3.9 38 186-223 20-58 (139)
2 d1fita_ d.13.1.1 (A:) FHIT (fr 70.7 2.2 0.00016 32.1 4.4 42 186-227 17-59 (146)
3 d2oika1 d.13.1.1 (A:6-144) His 61.9 5.3 0.00038 29.4 5.0 42 186-227 19-61 (139)
4 d1emsa1 d.13.1.1 (A:281-440) N 57.1 5.6 0.00041 30.4 4.4 40 186-225 34-74 (160)
5 d1guqa2 d.13.1.2 (A:178-348) G 52.9 7.6 0.00055 29.3 4.6 38 186-223 38-76 (171)
6 d1xqua_ d.13.1.1 (A:) Putative 47.6 3.9 0.00028 29.2 1.9 33 186-218 21-54 (113)
7 d1z84a2 d.13.1.2 (A:196-351) G 44.0 14 0.001 27.5 4.8 38 186-223 35-73 (156)
8 d1kpfa_ d.13.1.1 (A:) Protein 38.5 11 0.00081 26.6 3.2 36 186-221 19-55 (111)
9 d2axtl1 f.23.31.1 (L:1-37) Pho 24.1 39 0.0029 19.7 3.3 22 94-115 15-36 (37)
10 d1q90g_ f.23.26.1 (G:) PetG su 23.0 46 0.0033 18.5 3.3 21 94-114 7-27 (30)
No 1
>d1y23a_ d.13.1.1 (A:) Hit {Bacillus subtilis [TaxId: 1423]}
Probab=73.44 E-value=1.5 Score=32.49 Aligned_cols=38 Identities=8% Similarity=0.183 Sum_probs=32.9
Q ss_pred CCCeEEEEecCCCCCCceEEEEecCCeecC-CCCHHHHH
Q 025146 186 DEELCSVYVPTNHLYIGDIFLVNSEEIIRP-NLSVREGI 223 (257)
Q Consensus 186 ~~~~v~VfvPtsPptsG~l~~Vp~~~V~~l-DmsvEeAm 223 (257)
+++++.+|++..|.+-|.++++|++.+..+ |++.|+..
T Consensus 20 ede~~~af~d~~P~~~GH~LViPk~H~~~~~dL~~~~~~ 58 (139)
T d1y23a_ 20 EDEHVLAFLDISQVTKGHTLVIPKTHIENVYEFTDELAK 58 (139)
T ss_dssp ECSSEEEEECTTCSSTTCEEEEESSCCSSGGGCCHHHHH
T ss_pred ECCCEEEEecCCCCCCcEEEEEEecccccccccchHHHH
Confidence 467899999999988999999999999876 88887764
No 2
>d1fita_ d.13.1.1 (A:) FHIT (fragile histidine triad protein) {Human (Homo sapiens) [TaxId: 9606]}
Probab=70.65 E-value=2.2 Score=32.11 Aligned_cols=42 Identities=17% Similarity=0.208 Sum_probs=35.3
Q ss_pred CCCeEEEEecCCCCCCceEEEEecCCeecC-CCCHHHHHHHHh
Q 025146 186 DEELCSVYVPTNHLYIGDIFLVNSEEIIRP-NLSVREGIEIIV 227 (257)
Q Consensus 186 ~~~~v~VfvPtsPptsG~l~~Vp~~~V~~l-DmsvEeAmk~ii 227 (257)
+++.+.+|++..|-+-|.++++|++-+..+ |++-||+..+.-
T Consensus 17 e~e~~~afld~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~ 59 (146)
T d1fita_ 17 KTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQ 59 (146)
T ss_dssp ECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHH
T ss_pred ECCCEEEEECCCCCCCcEEEEEecceehHHHHhhHHHHHHHHH
Confidence 578899999999988999999999999876 899877664443
No 3
>d2oika1 d.13.1.1 (A:6-144) Histidine triad protein Mfla2506 {Methylobacillus flagellatus [TaxId: 405]}
Probab=61.93 E-value=5.3 Score=29.42 Aligned_cols=42 Identities=19% Similarity=0.270 Sum_probs=34.4
Q ss_pred CCCeEEEEecCCCCCCceEEEEecCCeecC-CCCHHHHHHHHh
Q 025146 186 DEELCSVYVPTNHLYIGDIFLVNSEEIIRP-NLSVREGIEIIV 227 (257)
Q Consensus 186 ~~~~v~VfvPtsPptsG~l~~Vp~~~V~~l-DmsvEeAmk~ii 227 (257)
.++.+.||+.--|.+-|.++++|++.+..+ |++-|++..+.-
T Consensus 19 e~~~~~v~l~~~p~~pGh~Lvipk~H~~~l~dL~~~e~~~l~~ 61 (139)
T d2oika1 19 QDALCRVVHVENQDYPGFCRVILNRHVKEMSDLRPAERDHLML 61 (139)
T ss_dssp ECSSEEEEECCCTTCTTCEEEEESSCCSCGGGSCHHHHHHHHH
T ss_pred ECCCEEEEEcCCCCCCcEEEEecccccchhhhccHHHHHHHHH
Confidence 357788999888866799999999999876 999998766643
No 4
>d1emsa1 d.13.1.1 (A:281-440) NIT-FHIT fusion protein, C-terminal domain {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=57.13 E-value=5.6 Score=30.44 Aligned_cols=40 Identities=15% Similarity=0.216 Sum_probs=34.1
Q ss_pred CCCeEEEEecCCCCCCceEEEEecCCeecC-CCCHHHHHHH
Q 025146 186 DEELCSVYVPTNHLYIGDIFLVNSEEIIRP-NLSVREGIEI 225 (257)
Q Consensus 186 ~~~~v~VfvPtsPptsG~l~~Vp~~~V~~l-DmsvEeAmk~ 225 (257)
.++.+.+|+.-.|.+-|-++++|++-+..+ |++-||...+
T Consensus 34 ede~~~af~Di~P~~pgH~LVIPK~H~~~l~dL~~ee~~~l 74 (160)
T d1emsa1 34 STPHSFVFVNLKPVTDGHVLVSPKRVVPRLTDLTDAETADL 74 (160)
T ss_dssp ECSSEEEEECSSCSSTTCEEEEESSCCSCGGGSCHHHHHHH
T ss_pred eCCCEEEEECCCCCCCCeEEEEEecccchhhhhhhHHHHHH
Confidence 578899999999988899999999999876 8998876433
No 5
>d1guqa2 d.13.1.2 (A:178-348) Galactose-1-phosphate uridylyltransferase {Escherichia coli [TaxId: 562]}
Probab=52.90 E-value=7.6 Score=29.31 Aligned_cols=38 Identities=16% Similarity=0.183 Sum_probs=31.7
Q ss_pred CCCeEEEEecCCCCCCceEEEEecCCeecC-CCCHHHHH
Q 025146 186 DEELCSVYVPTNHLYIGDIFLVNSEEIIRP-NLSVREGI 223 (257)
Q Consensus 186 ~~~~v~VfvPtsPptsG~l~~Vp~~~V~~l-DmsvEeAm 223 (257)
.++.+.+|+|-+|..-|-+.++|++.+..+ |++-++.-
T Consensus 38 e~e~~~af~~~~p~~p~h~lIiPk~h~~~~~~l~~~e~~ 76 (171)
T d1guqa2 38 ETEHWLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRS 76 (171)
T ss_dssp ECSSEEEECCTTCCSTTCEEEEESSCCSSGGGCCHHHHH
T ss_pred ECCeEEEEEcCCCCCcceEEEecchhcCChhhCCHHHHH
Confidence 468899999999988899999999999765 78866543
No 6
>d1xqua_ d.13.1.1 (A:) Putative hydrolase {Clostridium thermocellum [TaxId: 1515]}
Probab=47.61 E-value=3.9 Score=29.17 Aligned_cols=33 Identities=12% Similarity=0.161 Sum_probs=27.1
Q ss_pred CCCeEEEEecCCCCCCceEEEEecCCeecC-CCC
Q 025146 186 DEELCSVYVPTNHLYIGDIFLVNSEEIIRP-NLS 218 (257)
Q Consensus 186 ~~~~v~VfvPtsPptsG~l~~Vp~~~V~~l-Dms 218 (257)
+++.+.+|++..|.+-|-++++|++-+..+ |++
T Consensus 21 ede~~~af~d~~P~~~gH~LViPk~H~~~~~~l~ 54 (113)
T d1xqua_ 21 EDERVIAIKDINPAAPVHVLIIPKEHIANVKEIN 54 (113)
T ss_dssp ECSSEEEEECSSCSSSEEEEEEESSCCSSGGGCC
T ss_pred eCCCEEEEECCCCCCCceEEEeecccccchhhcc
Confidence 467889999999988999999999887654 444
No 7
>d1z84a2 d.13.1.2 (A:196-351) Galactose-1-phosphate uridylyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=43.98 E-value=14 Score=27.53 Aligned_cols=38 Identities=11% Similarity=0.157 Sum_probs=31.6
Q ss_pred CCCeEEEEecCCCCCCceEEEEecCCeecC-CCCHHHHH
Q 025146 186 DEELCSVYVPTNHLYIGDIFLVNSEEIIRP-NLSVREGI 223 (257)
Q Consensus 186 ~~~~v~VfvPtsPptsG~l~~Vp~~~V~~l-DmsvEeAm 223 (257)
.++.+.+|+|-+|-.-|-+.++|++.+..+ |++-++..
T Consensus 35 e~~~~~a~~p~~p~~p~h~lIiPk~h~~~~~~l~~~e~~ 73 (156)
T d1z84a2 35 ESSHFVSVAPFAATYPFEIWIIPKDHSSHFHHLDDVKAV 73 (156)
T ss_dssp ECSSEEEEECTTCSSTTCEEEEESSCCSCGGGCCHHHHH
T ss_pred ECCCEEEEEccCCCcCcEEEEEecchhhhhccCCHHHHH
Confidence 367899999999977899999999999876 78887543
No 8
>d1kpfa_ d.13.1.1 (A:) Protein kinase C inhibitor-1, PKCI-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.54 E-value=11 Score=26.59 Aligned_cols=36 Identities=6% Similarity=0.150 Sum_probs=29.1
Q ss_pred CCCeEEEEecCCCCCCceEEEEecCCeecC-CCCHHH
Q 025146 186 DEELCSVYVPTNHLYIGDIFLVNSEEIIRP-NLSVRE 221 (257)
Q Consensus 186 ~~~~v~VfvPtsPptsG~l~~Vp~~~V~~l-DmsvEe 221 (257)
++|.+.+|+...|.+-|-++++|++-+..+ |++.|+
T Consensus 19 ede~~~af~D~~P~~~gH~LViPk~H~~~~~~l~~~~ 55 (111)
T d1kpfa_ 19 EDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDD 55 (111)
T ss_dssp ECSSEEEEECSSCSSSEEEEEEESSCCSCGGGCCGGG
T ss_pred eCCCEEEEecCCCCCCceEEEeecchhcchhhhhhHH
Confidence 467888999988988999999999988765 666553
No 9
>d2axtl1 f.23.31.1 (L:1-37) Photosystem II reaction center protein L, PsbL {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=24.08 E-value=39 Score=19.68 Aligned_cols=22 Identities=18% Similarity=0.368 Sum_probs=16.2
Q ss_pred hHHHHHHHHHHHHHHHHHHhhH
Q 025146 94 LGFLTSILFIFFVGVFASSWLG 115 (257)
Q Consensus 94 lglli~llli~liG~La~~~~g 115 (257)
-++-..+++||++|++.++|+.
T Consensus 15 tsLy~GlLlifvl~vLFssYfF 36 (37)
T d2axtl1 15 TSLYLGLLLILVLALLFSSYFF 36 (37)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHhc
Confidence 3455567788999999888753
No 10
>d1q90g_ f.23.26.1 (G:) PetG subunit of the cytochrome b6f complex {Chlamydomonas reinhardtii [TaxId: 3055]}
Probab=23.05 E-value=46 Score=18.51 Aligned_cols=21 Identities=19% Similarity=0.572 Sum_probs=15.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhh
Q 025146 94 LGFLTSILFIFFVGVFASSWL 114 (257)
Q Consensus 94 lglli~llli~liG~La~~~~ 114 (257)
.|+++.++=+.++|+++..|+
T Consensus 7 ~GivlGlipiTl~Glfv~Ayl 27 (30)
T d1q90g_ 7 CGIVLGLVPVTIAGLFVTAYL 27 (30)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHhhHHHHHHHHHHHHHH
Confidence 467777778888998887654
Done!