BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>025148
MKATQSKSPIFKYFLISIFLTLPLLLLLLLFSLKAAVHPPPLPQNVALAESEDLRIRPGY
SSYDAYIQRQLNKTLNPKLRTTWTTRDWDRKIQVFAKFFDDLKRKKLLSNESKALCIGAR
VGQEVEALKRVGVSDSVGIDLVPYPPLVIEGDFHRQPFDDETFDFEFSNVFDHALYPDKF
VMEIERTLKPGGVCVLHVALSKRADKYSANDLFSVKPLVKLFKRSEMVRVRKVDGFGLDT
EVVFRKNAKSLNAIQRP

High Scoring Gene Products

Symbol, full name Information P value
AT1G24480 protein from Arabidopsis thaliana 1.9e-74
AT4G24805 protein from Arabidopsis thaliana 1.4e-69
AT5G01710 protein from Arabidopsis thaliana 2.4e-18
AT3G53400 protein from Arabidopsis thaliana 1.9e-12
CPUORF47
conserved peptide upstream open reading frame 47
protein from Arabidopsis thaliana 1.2e-07

The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  025148
        (257 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2023986 - symbol:AT1G24480 species:3702 "Arabi...   751  1.9e-74   1
TAIR|locus:504955468 - symbol:AT4G24805 species:3702 "Ara...   705  1.4e-69   1
TAIR|locus:2149790 - symbol:AT5G01710 species:3702 "Arabi...   229  2.4e-18   1
TAIR|locus:2052936 - symbol:AT2G16030 species:3702 "Arabi...   211  3.2e-17   1
TAIR|locus:2116412 - symbol:AT4G26730 species:3702 "Arabi...   200  4.7e-16   1
TAIR|locus:2084021 - symbol:AT3G53400 "AT3G53400" species...   174  1.9e-12   1
TAIR|locus:2143478 - symbol:CPUORF47 "conserved peptide u...   142  1.2e-07   1


>TAIR|locus:2023986 [details] [associations]
            symbol:AT1G24480 species:3702 "Arabidopsis thaliana"
            [GO:0005576 "extracellular region" evidence=ISM] [GO:0008152
            "metabolic process" evidence=IEA] [GO:0008168 "methyltransferase
            activity" evidence=IEA] InterPro:IPR013216 Pfam:PF08241
            EMBL:CP002684 GO:GO:0008168 EMBL:AC000103 UniGene:At.49913
            HOGENOM:HOG000242554 ProtClustDB:CLSN2690325 IPI:IPI00538959
            PIR:G86378 RefSeq:NP_173857.2 ProteinModelPortal:Q9FYL5 SMR:Q9FYL5
            PRIDE:Q9FYL5 EnsemblPlants:AT1G24480.1 GeneID:839064
            KEGG:ath:AT1G24480 TAIR:At1g24480 InParanoid:Q9FYL5 OMA:VWATRDW
            PhylomeDB:Q9FYL5 Genevestigator:Q9FYL5 Uniprot:Q9FYL5
        Length = 239

 Score = 751 (269.4 bits), Expect = 1.9e-74, P = 1.9e-74
 Identities = 146/201 (72%), Positives = 164/201 (81%)

Query:    50 ESEDLRIRPGYSSYDAYIQRQLNKTLNPKLXXXXXXXXXXXKIQVFAXXXXXXXXXXXXS 109
             E E +RIRPGY+SYD YIQRQLNKTLNP+L           KI+VF+            S
Sbjct:    33 EKELIRIRPGYTSYDYYIQRQLNKTLNPRLRTIWMTRDWDRKIKVFSRFFQDLKRQGLLS 92

Query:   110 NESKALCIGARVGQEVEALKRVGVSDSVGIDLVPYPPLVIEGDFHRQPFDDETFDFEFSN 169
              +SK LC+GARVGQEVEALKRVGV+DSVG+DLVPYPPLV++GDFH QPFDDETFDFEFSN
Sbjct:    93 KDSKCLCLGARVGQEVEALKRVGVNDSVGMDLVPYPPLVVKGDFHHQPFDDETFDFEFSN 152

Query:   170 VFDHALYPDKFVMEIERTLKPGGVCVLHVALSKRADKYSANDLFSVKPLVKLFKRSEMVR 229
             VFDHALYPDKFV EIERTL+PGG+CVLHVALS R+DKYSANDLFSV+ LVKLF++SE+V 
Sbjct:   153 VFDHALYPDKFVGEIERTLRPGGLCVLHVALSTRSDKYSANDLFSVEALVKLFRQSEVVH 212

Query:   230 VRKVDGFGLDTEVVFRKNAKS 250
             VR VDGFGLDTEVVFRK   S
Sbjct:   213 VRNVDGFGLDTEVVFRKKRDS 233


>TAIR|locus:504955468 [details] [associations]
            symbol:AT4G24805 species:3702 "Arabidopsis thaliana"
            [GO:0005576 "extracellular region" evidence=ISM] [GO:0008152
            "metabolic process" evidence=IEA] [GO:0008168 "methyltransferase
            activity" evidence=IEA] InterPro:IPR013216 Pfam:PF08241
            EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0008168 EMBL:AY035095
            EMBL:AY063058 IPI:IPI00531311 RefSeq:NP_680738.1 UniGene:At.22473
            ProteinModelPortal:Q94C79 PaxDb:Q94C79 PRIDE:Q94C79
            EnsemblPlants:AT4G24805.1 GeneID:828583 KEGG:ath:AT4G24805
            TAIR:At4g24805 eggNOG:NOG146127 HOGENOM:HOG000242554
            InParanoid:Q94C79 OMA:ALCIGAR ProtClustDB:CLSN2690325
            Genevestigator:Q94C79 Uniprot:Q94C79
        Length = 247

 Score = 705 (253.2 bits), Expect = 1.4e-69, P = 1.4e-69
 Identities = 138/204 (67%), Positives = 160/204 (78%)

Query:    45 NVALAESEDLRIRP-GYSSYDAYIQRQLNKTLNPKLXXXXXXXXXXXKIQVFAXXXXXXX 103
             +V     E +RIR  GYSSY+AYI+ QLNKT NPKL           K++VF+       
Sbjct:    42 SVTSVADEGIRIRHHGYSSYEAYIKHQLNKTQNPKLRKVWTTRDWDRKVRVFSTFFRRLS 101

Query:   104 XXXXXSNESKALCIGARVGQEVEALKRVGVSDSVGIDLVPYPPLVIEGDFHRQPFDDETF 163
                  SN+SKAL IGARVGQEV AL+ +GV DSVGIDLVP PPLV++GDFH QPFD+ETF
Sbjct:   102 DRGLLSNQSKALSIGARVGQEVAALRLIGVEDSVGIDLVPRPPLVVKGDFHAQPFDEETF 161

Query:   164 DFEFSNVFDHALYPDKFVMEIERTLKPGGVCVLHVALSKRADKYSANDLFSVKPLVKLFK 223
             DFEFSNVFDHALYP+KFV EIERTLKPGGVCVLHV++S + DKYSANDL SVKPLVKLFK
Sbjct:   162 DFEFSNVFDHALYPEKFVGEIERTLKPGGVCVLHVSISGKTDKYSANDLLSVKPLVKLFK 221

Query:   224 RSEMVRVRKVDGFGLDTEVVFRKN 247
             RS++V +RK+DGFGLDTE+VFRKN
Sbjct:   222 RSKVVEMRKIDGFGLDTEIVFRKN 245


>TAIR|locus:2149790 [details] [associations]
            symbol:AT5G01710 species:3702 "Arabidopsis thaliana"
            [GO:0008152 "metabolic process" evidence=IEA] [GO:0008168
            "methyltransferase activity" evidence=IEA] [GO:0006944 "cellular
            membrane fusion" evidence=RCA] [GO:0048193 "Golgi vesicle
            transport" evidence=RCA] InterPro:IPR013216 Pfam:PF08241
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0008168 EMBL:AL161946
            InterPro:IPR006342 Pfam:PF05050 EMBL:AY056223 EMBL:AY142665
            EMBL:AF083794 IPI:IPI00529890 PIR:T48192 RefSeq:NP_195791.1
            UniGene:At.25489 ProteinModelPortal:Q9M005 SMR:Q9M005 PaxDb:Q9M005
            PRIDE:Q9M005 EnsemblPlants:AT5G01710.1 GeneID:831693
            KEGG:ath:AT5G01710 TAIR:At5g01710 eggNOG:NOG260407
            HOGENOM:HOG000030521 InParanoid:Q9M005 OMA:SFEINHD PhylomeDB:Q9M005
            ProtClustDB:CLSN2687136 ArrayExpress:Q9M005 Genevestigator:Q9M005
            Uniprot:Q9M005
        Length = 513

 Score = 229 (85.7 bits), Expect = 2.4e-18, P = 2.4e-18
 Identities = 54/147 (36%), Positives = 76/147 (51%)

Query:    92 IQVFAXXXXXXXXXXXXSNESKALCIGARVGQEVEALKRVGVSDSVGIDLVPYPPLVIEG 151
             +Q ++            S ESK LC+   +GQEV +L+ +GV +SVGI      PLV+ G
Sbjct:    91 VQFYSSIFQDLIADGYLSPESKTLCVETAIGQEVHSLREIGVKNSVGISKKASRPLVVRG 150

Query:   152 DFHRQPFDDETFDFEFS--NVFDHALYPDKFVMEIERTLKPGGVCVLHVALSKRADKYSA 209
             + H  PF+D  FDF FS  +    +L   +F  EI RTLKP G  V+HV          A
Sbjct:   151 EGHAIPFEDNAFDFVFSGGDRLGKSLKQLEFADEITRTLKPEGFAVVHVG---------A 201

Query:   210 NDLFSVKPLVKLFKRSEMVRVRKVDGF 236
              D +S    + LF    +V++R +DGF
Sbjct:   202 TDTYSFNSFLDLFNSCRLVKMRDIDGF 228


>TAIR|locus:2052936 [details] [associations]
            symbol:AT2G16030 species:3702 "Arabidopsis thaliana"
            [GO:0008152 "metabolic process" evidence=IEA] [GO:0008168
            "methyltransferase activity" evidence=IEA] InterPro:IPR013216
            Pfam:PF08241 EMBL:CP002685 GO:GO:0008168 EMBL:AC007134
            UniGene:At.52759 UniGene:At.40327 ProtClustDB:CLSN2719849
            EMBL:BT008620 EMBL:AK229593 IPI:IPI00527238 PIR:H84535
            RefSeq:NP_179201.1 ProteinModelPortal:Q9XII4 SMR:Q9XII4
            EnsemblPlants:AT2G16030.1 GeneID:816100 KEGG:ath:AT2G16030
            TAIR:At2g16030 InParanoid:Q9XII4 OMA:NARIWSS PhylomeDB:Q9XII4
            Genevestigator:Q9XII4 Uniprot:Q9XII4
        Length = 231

 Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
 Identities = 52/137 (37%), Positives = 77/137 (56%)

Query:   110 NESKALCIGARVGQEVEALKRVGVSDSVGIDLVPYPPLVIEGDFHRQPFDDETFDFEFSN 169
             N +KALC+ A  G  + AL ++G+SD   ++LV   PLV   D H  PF D  FDF F+ 
Sbjct:    98 NHTKALCLSAGAGHALMALSQIGLSDVTAVELVDSIPLVKRADPHNLPFFDGVFDFAFTA 157

Query:   170 VFDHALYPDKFVMEIERTLKPGGVCVLHVALSKRADKYSANDLFSVKPLVKLFKRSEMVR 229
                 AL+P +FV E+ERT++ GG CV+ V      D+   +D   V+ + +LF  S++V 
Sbjct:   158 HLAEALFPWQFVEEMERTVRRGGFCVVSV------DECGGDD---VRDIARLFHNSKVVD 208

Query:   230 VRKVDGFGLD-TEVVFR 245
             V  V   G   T ++F+
Sbjct:   209 VANVTLEGSKKTSILFK 225


>TAIR|locus:2116412 [details] [associations]
            symbol:AT4G26730 species:3702 "Arabidopsis thaliana"
            [GO:0008152 "metabolic process" evidence=IEA] [GO:0008168
            "methyltransferase activity" evidence=IEA] InterPro:IPR013216
            Pfam:PF08241 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035440
            EMBL:AL161565 GO:GO:0008168 IPI:IPI00533733 PIR:T04796
            RefSeq:NP_194403.1 UniGene:At.50367 ProteinModelPortal:Q9SZ14
            SMR:Q9SZ14 PRIDE:Q9SZ14 EnsemblPlants:AT4G26730.1 GeneID:828780
            KEGG:ath:AT4G26730 TAIR:At4g26730 eggNOG:NOG243011
            HOGENOM:HOG000241524 InParanoid:Q9SZ14 OMA:MDGHVRR PhylomeDB:Q9SZ14
            ProtClustDB:CLSN2719849 ArrayExpress:Q9SZ14 Genevestigator:Q9SZ14
            Uniprot:Q9SZ14
        Length = 208

 Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
 Identities = 48/124 (38%), Positives = 69/124 (55%)

Query:   110 NESKALCIGARVGQEVEALKRVGVSDSVGIDLVPYPPLVIEGDFHRQPFDDETFDFEFSN 169
             N +KALC+    G    AL ++G+SD   ++LV   PLV   D H  PF D  FDF F+ 
Sbjct:    63 NHTKALCLSDGAGHAPMALSQIGLSDVTAVELVDSIPLVKRADPHNLPFFDRVFDFVFTA 122

Query:   170 VFDHALYPDKFVMEIERTLKPGGVCVLHVALSKRADKYSANDLFSVKPLVKLFKRSEMVR 229
                 AL+P +FV E+ERT++ GG CV+ V      D+ S +D   V+ + + F  S++V 
Sbjct:   123 HLAEALFPWRFVEEMERTVRRGGFCVVAV------DECSGDD---VRDIARFFHNSKIVD 173

Query:   230 VRKV 233
             V  V
Sbjct:   174 VANV 177


>TAIR|locus:2084021 [details] [associations]
            symbol:AT3G53400 "AT3G53400" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002686
            GenomeReviews:BA000014_GR EMBL:AL132966 HOGENOM:HOG000015115
            ProtClustDB:CLSN2684919 IPI:IPI00520296 PIR:T45880
            RefSeq:NP_190908.1 UniGene:At.28564 ProteinModelPortal:Q9LFH7
            SMR:Q9LFH7 PRIDE:Q9LFH7 EnsemblPlants:AT3G53400.1 GeneID:824508
            KEGG:ath:AT3G53400 TAIR:At3g53400 eggNOG:NOG274358
            InParanoid:Q9LFH7 OMA:FERRIHY PhylomeDB:Q9LFH7
            Genevestigator:Q9LFH7 Uniprot:Q9LFH7
        Length = 466

 Score = 174 (66.3 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 52/144 (36%), Positives = 75/144 (52%)

Query:   109 SNESKALCIGARVGQEVEALKRVGVSDSVGIDLVPYPPLVIEG-DFHRQ-PFDDETFDFE 166
             SN+SKALCIG R    V A+ R G+SD V +  +P P    +   F  +  ++D +F F 
Sbjct:   116 SNDSKALCIGRRSVSAVLAMNRQGISD-VSVAYMP-PVFAFKHRKFTSELHYEDASFGFV 173

Query:   167 FSNVFDHALYPDKFVMEIERTLKPGGVCVLHVALSKRADKYSANDLF-SVKPLVKLFKRS 225
             FS   +    P   V EIER LKPGG   + V  +  +D   +N+L  SV P+  L K S
Sbjct:   174 FSMDLESVAVPASLVYEIERILKPGGTGAMLVGTTSGSD---SNELVRSVSPVSSLLKNS 230

Query:   226 EMVRVRKVDGFGLDTEVVFRKNAK 249
              +V V  +   G    VVF+++ +
Sbjct:   231 SVVHVASL---GKQVLVVFKRDGE 251


>TAIR|locus:2143478 [details] [associations]
            symbol:CPUORF47 "conserved peptide upstream open reading
            frame 47" species:3702 "Arabidopsis thaliana" [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008152 "metabolic process"
            evidence=IEA] [GO:0008168 "methyltransferase activity"
            evidence=IEA] InterPro:IPR013216 Pfam:PF08241 EMBL:CP002688
            GO:GO:0008168 GO:GO:0032259 EMBL:AL163002 UniGene:At.28243
            UniGene:At.63785 IPI:IPI00846400 RefSeq:NP_001078522.1
            ProteinModelPortal:A8MQH8 SMR:A8MQH8 EnsemblPlants:AT5G03190.2
            GeneID:831909 KEGG:ath:AT5G03190 TAIR:At5g03190 eggNOG:NOG266335
            HOGENOM:HOG000015115 OMA:ICYVDEL PhylomeDB:A8MQH8
            ProtClustDB:CLSN2684919 Genevestigator:A8MQH8 Uniprot:A8MQH8
        Length = 475

 Score = 142 (55.0 bits), Expect = 1.2e-07, P = 1.2e-07
 Identities = 45/138 (32%), Positives = 64/138 (46%)

Query:   111 ESKALCIGARVGQEVEALKRVGVSDSVGIDLVPYPPLVIEGDFHRQPFD-DETFDFEFSN 169
             ++K LCIG      V   K +G S   G+   P          +      D++FDF    
Sbjct:   129 DAKILCIGQGSDSAVSGFKEMGFSVVQGVPKHPLFSFFSRKHVNELELSGDKSFDFVLCG 188

Query:   170 VFDHALYPDKFVMEIERTLKPGGVCVLHVALSKRADKYSANDLFSVKPLVKLFKRSEMVR 229
               DH   P   V+E+ER LKPGG   + V+ +       AN L  VK +    K+SE+VR
Sbjct:   189 DVDHVASPALLVLEMERVLKPGGTGAVLVSTN-------ANRL--VKSVTSGLKQSEIVR 239

Query:   230 VRKVDGFGLDTEVVFRKN 247
             V  +D F   T +VF++N
Sbjct:   240 VNNLDKF---TVIVFKRN 254


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.137   0.395    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      257       214   0.00085  112 3  11 22  0.37    33
                                                     31  0.49    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  567 (60 KB)
  Total size of DFA:  145 KB (2089 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.52u 0.14s 15.66t   Elapsed:  00:00:01
  Total cpu time:  15.52u 0.14s 15.66t   Elapsed:  00:00:01
  Start:  Thu May  9 18:12:44 2013   End:  Thu May  9 18:12:45 2013

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