Query 025149
Match_columns 257
No_of_seqs 187 out of 1286
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 04:41:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025149.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025149hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3q6z_A Poly [ADP-ribose] polym 100.0 9.2E-48 3.1E-52 334.6 19.4 179 72-256 28-214 (214)
2 3q71_A Poly [ADP-ribose] polym 100.0 2.4E-46 8.3E-51 326.8 21.5 170 79-255 37-215 (221)
3 4abl_A Poly [ADP-ribose] polym 100.0 3.7E-46 1.3E-50 317.4 21.7 168 67-254 9-181 (183)
4 1spv_A Putative polyprotein/ph 100.0 3.5E-46 1.2E-50 317.9 21.4 170 80-255 2-175 (184)
5 1yd9_A Core histone macro-H2A. 100.0 2.5E-46 8.4E-51 321.1 19.9 171 77-254 15-190 (193)
6 2xd7_A Core histone macro-H2A. 100.0 2.6E-46 8.7E-51 321.0 19.9 170 77-253 15-192 (193)
7 2x47_A Macro domain-containing 100.0 2E-45 6.8E-50 324.1 21.2 172 74-255 53-232 (235)
8 3kh6_A Poly [ADP-ribose] polym 100.0 1.1E-43 3.8E-48 305.6 20.7 167 68-254 21-192 (199)
9 2dx6_A Hypothetical protein TT 100.0 2.4E-43 8.1E-48 293.6 18.4 158 81-251 2-159 (159)
10 1vhu_A Hypothetical protein AF 100.0 2.4E-43 8.2E-48 306.3 15.6 174 76-256 17-202 (211)
11 3eti_A X (ADRP) domain, macro 100.0 1.3E-43 4.4E-48 297.9 12.4 155 80-252 9-167 (168)
12 3gqe_A Non-structural protein 100.0 3.2E-41 1.1E-45 283.2 16.3 157 80-254 3-161 (168)
13 3gpg_A NSP3, non-structural pr 100.0 1.1E-41 3.6E-46 286.1 13.2 155 80-253 9-166 (168)
14 3ejg_A Non-structural protein 100.0 8.3E-41 2.8E-45 285.9 14.0 152 80-252 37-192 (193)
15 2acf_A Replicase polyprotein 1 100.0 1.4E-40 4.7E-45 282.8 14.2 158 73-255 14-175 (182)
16 3ejf_A Non-structural protein 100.0 2E-40 6.8E-45 280.0 12.4 162 77-251 10-175 (176)
17 2vri_A Non-structural protein 100.0 3.2E-40 1.1E-44 278.8 10.9 165 70-253 8-172 (174)
18 1njr_A 32.1 kDa protein in ADH 100.0 2.1E-38 7E-43 285.7 8.8 187 28-247 20-242 (284)
19 4gua_A Non-structural polyprot 100.0 5.2E-35 1.8E-39 279.0 15.8 156 80-254 343-501 (670)
20 2jyc_A Uncharacterized protein 100.0 4.4E-29 1.5E-33 208.0 14.8 142 77-239 16-158 (160)
21 2eee_A Uncharacterized protein 100.0 6.7E-29 2.3E-33 204.5 14.5 140 80-240 8-148 (149)
22 2fg1_A Conserved hypothetical 99.9 1.9E-26 6.5E-31 191.4 12.4 137 82-225 5-147 (158)
23 3sig_A PArg, poly(ADP-ribose) 99.1 2.5E-10 8.6E-15 102.2 9.1 92 162-253 172-276 (277)
24 2kwv_A RAD30 homolog B, DNA po 49.2 1.8 6.1E-05 27.9 -1.4 35 12-46 8-42 (48)
25 2vg0_A Short-chain Z-isoprenyl 48.4 26 0.0009 29.7 5.4 48 181-229 33-80 (227)
26 3dhn_A NAD-dependent epimerase 48.2 46 0.0016 26.5 6.8 44 159-203 68-111 (227)
27 3ugs_B Undecaprenyl pyrophosph 34.3 48 0.0016 28.2 4.8 46 182-228 37-82 (225)
28 4h8e_A Undecaprenyl pyrophosph 30.3 55 0.0019 28.3 4.6 40 181-220 54-93 (256)
29 3h2s_A Putative NADH-flavin re 26.2 70 0.0024 25.2 4.3 41 159-202 63-103 (224)
30 3lgd_A Adenosine deaminase CEC 23.9 4.6E+02 0.016 24.7 10.2 55 176-230 194-253 (508)
31 3pao_A Adenosine deaminase; st 23.6 1.9E+02 0.0067 25.3 7.1 54 176-230 72-128 (326)
32 2zvr_A Uncharacterized protein 23.2 2.7E+02 0.0093 22.9 7.8 62 178-240 109-170 (290)
33 3sgv_B Undecaprenyl pyrophosph 23.0 61 0.0021 28.1 3.4 41 180-220 46-86 (253)
34 2vg3_A Undecaprenyl pyrophosph 22.7 90 0.0031 27.4 4.6 40 181-220 85-124 (284)
35 3ew7_A LMO0794 protein; Q8Y8U8 21.5 1E+02 0.0034 24.1 4.4 42 159-204 62-103 (221)
36 3dct_B Nuclear receptor coacti 21.2 30 0.001 18.2 0.7 8 4-11 6-13 (21)
37 2d2r_A Undecaprenyl pyrophosph 20.1 74 0.0025 27.3 3.4 40 181-220 45-84 (245)
No 1
>3q6z_A Poly [ADP-ribose] polymerase 14; structural genomics consortium, SGC, ADP-ribose binding, TRA; HET: APR; 2.23A {Homo sapiens}
Probab=100.00 E-value=9.2e-48 Score=334.59 Aligned_cols=179 Identities=32% Similarity=0.485 Sum_probs=163.5
Q ss_pred CceeecCCCceEEEEEcccceeccCCCCcEEEEcCCCCCCCCCcHHHHHHHHhChHHHHHHhhcCccCCCcccCCCcEEE
Q 025149 72 DGHFKLSESAALVINKGDITKWSVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELREACCKVPEVRPEVRCPIGEARI 151 (257)
Q Consensus 72 ~~~f~~~~n~~I~I~~GDIt~~~v~~~~DaIVNaaN~~l~~~gGvs~aI~~aaG~~l~~e~~~~~~~~~~~~~~~G~v~i 151 (257)
...+.+.++.+|++++||||++++ ||||||||+.+.++|||++||++++|++|++||+++++. .+++++|++++
T Consensus 28 ~~~~~~~~g~~I~v~~GDIt~~~v----DaIVNaAN~~l~~ggGV~~AI~~aaG~~l~~ec~~~~~~--~g~~~~G~a~i 101 (214)
T 3q6z_A 28 FSRTVLAPGVVLIVQQGDLARLPV----DVVVNASNEDLKHYGGLAAALSKAAGPELQADCDQIVKR--EGRLLPGNATI 101 (214)
T ss_dssp CEEEEEETTEEEEEEECCTTSCSS----SEEEEEECTTCCCCSHHHHHHHHHHCTHHHHHHHHHHHH--HCCCCTTCEEE
T ss_pred EEEEEcCCCcEEEEEecccccCcC----CEEEeCCCCCCCCCchHHHHHHHhhhHHHHHHHHHHHHH--cCCCCCCeEEE
Confidence 345566778999999999999876 999999999999999999999999999999999987632 23799999999
Q ss_pred eeCCCCCCCeEEEEeCCccCCCCC--cHHHHHHHHHHHHHHHHHcCCcEEEecccccCCCCCCHHHHHHHHHHHHHHHhc
Q 025149 152 TPGFKLPASHVIHTVGPIYDADSN--PEASLRNAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVALSTVKEFAN 229 (257)
Q Consensus 152 T~ag~L~~k~IIH~V~P~~~~~~~--~~~~L~~~y~~~L~~A~~~~~~SIAfP~LgTG~~g~p~~~~A~~~l~ai~~fl~ 229 (257)
|++|+||||||||+|+|.|+.+.. ..+.|++||++||+.|.+++++|||||+||||++|||++++|++|++++++|++
T Consensus 102 T~~~~L~~k~VIH~VgP~~~~~~~~~~~~~L~~~y~~~L~~A~~~~i~SIAfP~IstG~~g~P~~~aA~i~~~av~~fl~ 181 (214)
T 3q6z_A 102 SKAGKLPYHHVIHAVGPRWSGYEAPRCVYLLRRAVQLSLCLAEKYKYRSIAIPAISSGVFGFPLGRCVETIVSAIKENFQ 181 (214)
T ss_dssp EECTTSSSSEEEEEECCCCCGGGHHHHHHHHHHHHHHHHHHHHHTTCSEEEECCTTSSTTCCCHHHHHHHHHHHHHHHTS
T ss_pred EcCCCCCCCEEEEecCCcccCCCcchHHHHHHHHHHHHHHHHHHcCCcEEEECcccCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999987542 357999999999999999999999999999999999999999999999999985
Q ss_pred ------CCCeEEEEecChHHHHHHHHHHHHHhh
Q 025149 230 ------DFKEVHFVLFSDDIYNVWLNKAKELLE 256 (257)
Q Consensus 230 ------~l~~V~fv~~~~~~~~~f~~~~~~~~~ 256 (257)
.+++|+||+|+++++++|+++++++|+
T Consensus 182 ~~~~~~~l~~V~fv~~d~~~~~~f~~~l~~~f~ 214 (214)
T 3q6z_A 182 FKKDGHCLKEIYLVDVSEKTVEAFAEAVKTVFK 214 (214)
T ss_dssp SCC--CCCCEEEEEESSHHHHHHHHHHHHHHC-
T ss_pred hcCCCCCCCEEEEEeCCHHHHHHHHHHHHHhhC
Confidence 478999999999999999999999984
No 2
>3q71_A Poly [ADP-ribose] polymerase 14; structural genomics, structural genomics consortium, SGC, transferase, PARP14 macro 2; HET: AR6; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.4e-46 Score=326.78 Aligned_cols=170 Identities=23% Similarity=0.389 Sum_probs=156.4
Q ss_pred CCceEEEEEcccceeccCCCCcEEEEcCCCCC-CCCCcHHHHHHHHhChHHHHHHhhcCccCCCcccCCCcEEEeeCCCC
Q 025149 79 ESAALVINKGDITKWSVDGSSDAIVNPANERM-LGGGGADGAIHRAAGPELREACCKVPEVRPEVRCPIGEARITPGFKL 157 (257)
Q Consensus 79 ~n~~I~I~~GDIt~~~v~~~~DaIVNaaN~~l-~~~gGvs~aI~~aaG~~l~~e~~~~~~~~~~~~~~~G~v~iT~ag~L 157 (257)
++.+|+|++||||++++ |||||+||+.| .++|||++||+++||++|++||+++.+ ++++++|++++|++|+|
T Consensus 37 ~g~~I~i~~GDIt~~~v----DAIVNaAN~~l~~~gGGV~~AI~~aaG~~L~~ec~~~~~---~~~~~~G~a~iT~g~~L 109 (221)
T 3q71_A 37 GGLQMLLVKEGVQNAKT----DVVVNSVPLDLVLSRGPLSKSLLEKAGPELQEELDTVGQ---GVAVSMGTVLKTSSWNL 109 (221)
T ss_dssp TCCEEEEEESCGGGCCS----SEEEEECCTTCCTTSSHHHHHHHHHHCTHHHHHHHHHHH---TSCCCTTCEEEEECTTS
T ss_pred CCcEEEEEeCcccCCcC----CEEEECCCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhc---cCCCCCCeEEEEcCCCC
Confidence 46999999999999876 99999999999 578999999999999999999998752 34799999999999999
Q ss_pred CCCeEEEEeCCccCCCCC-cHHHHHHHHHHHHHHHHHcCCcEEEecccccCCCCCCHHHHHHHHHHHHHHHhc-----CC
Q 025149 158 PASHVIHTVGPIYDADSN-PEASLRNAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVALSTVKEFAN-----DF 231 (257)
Q Consensus 158 ~~k~IIH~V~P~~~~~~~-~~~~L~~~y~~~L~~A~~~~~~SIAfP~LgTG~~g~p~~~~A~~~l~ai~~fl~-----~l 231 (257)
|||||||+|+|.|+.+.. +.+.|++||++||++|.+++++|||||+||||++|||++++|++|++++++|++ .+
T Consensus 110 p~k~VIHtVgP~~~~~~~~~~~~L~~~y~~~L~~A~e~~i~SIAfPaIsTG~~G~P~~~aA~i~~~~v~~fl~~~~~~~l 189 (221)
T 3q71_A 110 DCRYVLHVVAPEWRNGSTSSLKIMEDIIRECMEITESLSLKSIAFPAIGTGNLGFPKNIFAELIISEVFKFSSKNQLKTL 189 (221)
T ss_dssp SSSEEEEECCCCCTTTCHHHHHHHHHHHHHHHHHHHHTTCCEEEEECTTSSTTCCCHHHHHHHHHHHHHHHHHHCCCSSC
T ss_pred CCCEEEEeCCCCCcCCCchHHHHHHHHHHHHHHHHHHhCCceEeeccccCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 999999999999987652 458999999999999999999999999999999999999999999999999985 47
Q ss_pred CeEEEEecCh--HHHHHHHHHHHHHh
Q 025149 232 KEVHFVLFSD--DIYNVWLNKAKELL 255 (257)
Q Consensus 232 ~~V~fv~~~~--~~~~~f~~~~~~~~ 255 (257)
++|+||+|++ ++|++|.++|++.|
T Consensus 190 ~~V~fv~f~~d~~~~~~f~~~l~~r~ 215 (221)
T 3q71_A 190 QEVHFLLHPSDHENIQAFSDEFARRA 215 (221)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 8999999965 57899999999987
No 3
>4abl_A Poly [ADP-ribose] polymerase 14; transferase, PARP14; 1.15A {Homo sapiens} PDB: 4abk_A
Probab=100.00 E-value=3.7e-46 Score=317.40 Aligned_cols=168 Identities=23% Similarity=0.339 Sum_probs=156.0
Q ss_pred CCCCCCceeecCCCceEEEEEcccceeccCCCCcEEEEcCCCCCCCCCcHHHHHHHHhChHHHHHHhhcCccCCCcccCC
Q 025149 67 DQRSEDGHFKLSESAALVINKGDITKWSVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELREACCKVPEVRPEVRCPI 146 (257)
Q Consensus 67 ~~~~~~~~f~~~~n~~I~I~~GDIt~~~v~~~~DaIVNaaN~~l~~~gGvs~aI~~aaG~~l~~e~~~~~~~~~~~~~~~ 146 (257)
++....+.+++. +.+|++++||||++++ |||||+||+.+.+++||++||++++|++|++||+++. ++++
T Consensus 9 ~~~~~~~~~~ig-~~~i~i~~GDIt~~~~----DaIVNaaN~~l~~ggGV~~aI~~aaG~~l~~ec~~~~------~~~~ 77 (183)
T 4abl_A 9 SPDSGVYEMKIG-SIIFQVASGDITKEEA----DVIVNSTSNSFNLKAGVSKAILECAGQNVERECSQQA------QQRK 77 (183)
T ss_dssp CSSTTCEEEEET-TEEEEEEESCGGGCBC----SEEEEEECTTSCCCSTHHHHHHHHHCHHHHHHHHHHH------HHSC
T ss_pred cCCCCceEEEEC-CEEEEEEeCcccCccc----CEEEECCCCCCCCCccHHHHHHHHhhHHHHHHHHHhc------CCCC
Confidence 344556666775 4999999999999876 9999999999999999999999999999999999874 6899
Q ss_pred CcEEEeeCCCCCCCeEEEEeCCccCCCCCcHHHHHHHHHHHHHHHHHcCCcEEEecccccCCCCCCHHHHHHHHHHHHHH
Q 025149 147 GEARITPGFKLPASHVIHTVGPIYDADSNPEASLRNAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVALSTVKE 226 (257)
Q Consensus 147 G~v~iT~ag~L~~k~IIH~V~P~~~~~~~~~~~L~~~y~~~L~~A~~~~~~SIAfP~LgTG~~g~p~~~~A~~~l~ai~~ 226 (257)
|++++|++|+||||||||+|+|.| |++||++||+.|.+++++|||||+||||++|||++++|++|++++++
T Consensus 78 G~a~iT~~~~L~~k~VIH~vgP~~---------L~~~y~~~L~~a~~~~~~SIAfP~IstG~~g~p~~~aa~i~~~~v~~ 148 (183)
T 4abl_A 78 NDYIITGGGFLRCKNIIHVIGGND---------VKSSVSSVLQECEKKNYSSICLPAIGTGNAKQHPDKVAEAIIDAIED 148 (183)
T ss_dssp CSEEEEECTTSBSSEEEEEETTSC---------HHHHHHHHHHHHHHTTCCEEEECCTTSSTTCCCHHHHHHHHHHHHHH
T ss_pred CceEEecCCCCCCCEEEEeCcHHH---------HHHHHHHHHHHHHHcCCCeEeeccccCCCCCcCHHHHHHHHHHHHHH
Confidence 999999999999999999999975 99999999999999999999999999999999999999999999999
Q ss_pred Hhc-----CCCeEEEEecChHHHHHHHHHHHHH
Q 025149 227 FAN-----DFKEVHFVLFSDDIYNVWLNKAKEL 254 (257)
Q Consensus 227 fl~-----~l~~V~fv~~~~~~~~~f~~~~~~~ 254 (257)
|++ .+++|+||+|+++++++|.+++++.
T Consensus 149 fl~~~~~~~l~~V~fv~f~~~~~~~f~~~l~kr 181 (183)
T 4abl_A 149 FVQKGSAQSVKKVKVVIFLPQVLDVFYANMKKR 181 (183)
T ss_dssp HHHTTCCSSCCEEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHhcCCCCCCEEEEEECCHHHHHHHHHHHHhh
Confidence 985 4789999999999999999999874
No 4
>1spv_A Putative polyprotein/phosphatase; structural genomoics, alpha/beta monomeric protein, structural genomics, PSI, protein structure initiative; HET: MES; 2.00A {Escherichia coli} SCOP: c.50.1.2
Probab=100.00 E-value=3.5e-46 Score=317.89 Aligned_cols=170 Identities=44% Similarity=0.702 Sum_probs=157.3
Q ss_pred CceEEEEEcccceeccCCCCcEEEEcCCCCCCCCCcHHHHHHHHhChHHHHHHhhcCccCCCcccCCCcEEEeeCCCCCC
Q 025149 80 SAALVINKGDITKWSVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELREACCKVPEVRPEVRCPIGEARITPGFKLPA 159 (257)
Q Consensus 80 n~~I~I~~GDIt~~~v~~~~DaIVNaaN~~l~~~gGvs~aI~~aaG~~l~~e~~~~~~~~~~~~~~~G~v~iT~ag~L~~ 159 (257)
+.+|++++||||++++ |||||+||+.+.++|||++||++++|++|++||+++++. .+++++|++++|++++|||
T Consensus 2 ~~~i~i~~GDIt~~~~----DaIVNaaN~~l~~ggGv~~aI~~aaG~~l~~e~~~~~~~--~g~~~~G~a~iT~~~~L~~ 75 (184)
T 1spv_A 2 KTRIHVVQGDITKLAV----DVIVNAANPSLMGGGGVDGAIHRAAGPALLDACLKVRQQ--QGDCPTGHAVITLAGDLPA 75 (184)
T ss_dssp -CCEEEEESCGGGCCC----SEEEEECCTTCSCCSHHHHHHHHHHCHHHHHHHHHHHHH--HCSCCTTCEEEECCTTSSS
T ss_pred CCeEEEEeCcCCcCCC----CEEEECCCCCCCCCchHHHHHHHHhCHHHHHHHHHHHHh--cCCCCCCCEEEeeCCCCCC
Confidence 3679999999999976 999999999999999999999999999999999987532 2379999999999999999
Q ss_pred CeEEEEeCCccCCCC-CcHHHHHHHHHHHHHHHHHcCCcEEEecccccCCCCCCHHHHHHHHHHHHHHHhc---CCCeEE
Q 025149 160 SHVIHTVGPIYDADS-NPEASLRNAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVALSTVKEFAN---DFKEVH 235 (257)
Q Consensus 160 k~IIH~V~P~~~~~~-~~~~~L~~~y~~~L~~A~~~~~~SIAfP~LgTG~~g~p~~~~A~~~l~ai~~fl~---~l~~V~ 235 (257)
|||||+|||.|+++. ...+.|++||++||+.|.+++++|||||+||||++|||++++|++|++++++|++ .+++|+
T Consensus 76 k~VIH~vgP~~~~~~~~~~~~L~~~y~~~L~~a~~~~~~SIAfP~IstG~~g~p~~~aa~i~~~~v~~~l~~~~~~~~V~ 155 (184)
T 1spv_A 76 KAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANSYTSVAFPAISTGVYGYPRAAAAEIAVKTVSEFITRHALPEQVY 155 (184)
T ss_dssp SEEEEECCCCCSSSSSSHHHHHHHHHHHHHHHHHHTTCSEEEECCTTSSTTCCCHHHHHHHHHHHHHHHHHHCCSSSEEE
T ss_pred CEEEEEcCCcccCCCcchHHHHHHHHHHHHHHHHHhCCceEEeccccCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCEEE
Confidence 999999999998754 4578999999999999999999999999999999999999999999999999986 578999
Q ss_pred EEecChHHHHHHHHHHHHHh
Q 025149 236 FVLFSDDIYNVWLNKAKELL 255 (257)
Q Consensus 236 fv~~~~~~~~~f~~~~~~~~ 255 (257)
||+|+++++++|++.++++|
T Consensus 156 ~v~~~~~~~~~~~~~l~~~~ 175 (184)
T 1spv_A 156 FVCYDEENAHLYERLLTQQG 175 (184)
T ss_dssp EEESSHHHHHHHHHHHHCC-
T ss_pred EEECCHHHHHHHHHHHHHhC
Confidence 99999999999999999887
No 5
>1yd9_A Core histone macro-H2A.1; alpha-beta structure, A1PP domain, macro-domain, structural protein; 1.60A {Rattus norvegicus} SCOP: c.50.1.2 PDB: 1zr3_A* 2fxk_A 3iid_A* 3iif_A* 1zr5_A
Probab=100.00 E-value=2.5e-46 Score=321.07 Aligned_cols=171 Identities=27% Similarity=0.482 Sum_probs=157.5
Q ss_pred cCCCceEEEEEcccceeccCCCCcEEEEcCCCCCCCCCcHHHHHHHHhChHHHHHHhhcCccCCCcccCCCcEEEeeCCC
Q 025149 77 LSESAALVINKGDITKWSVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELREACCKVPEVRPEVRCPIGEARITPGFK 156 (257)
Q Consensus 77 ~~~n~~I~I~~GDIt~~~v~~~~DaIVNaaN~~l~~~gGvs~aI~~aaG~~l~~e~~~~~~~~~~~~~~~G~v~iT~ag~ 156 (257)
+..+.+|++++||||++++ |||||+||+.+.++|||++||++++|++|++||+++++. .+++++|++++|++|+
T Consensus 15 ~~~~~~i~i~~GDIt~~~~----DaIVNaaN~~l~~ggGv~~aI~~aaG~~l~~ec~~~~~~--~g~~~~G~a~iT~~~~ 88 (193)
T 1yd9_A 15 LFLGQKLQVVQADIASIDS----DAVVHPTNTDFYIGGEVGSTLEKKGGKEFVEAVLELRKK--NGPLEVAGAAVSAGHG 88 (193)
T ss_dssp CTTSCEEEEECSCGGGCCC----SEEEEECCTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHH--HCSCCTTCEEEEECTT
T ss_pred cCCCCEEEEEeCccCcCcC----CEEEECCCccCCCCchHHHHHHHHhhHHHHHHHHHHHHH--cCCCCCCCEEEecCCC
Confidence 3447899999999999976 999999999999999999999999999999999987532 2379999999999999
Q ss_pred CCCCeEEEEeCCccCCCCCcHHHHHHHHHHHHHHHHHcCCcEEEecccccCCCCCCHHHHHHHHHHHHHHHhc-----CC
Q 025149 157 LPASHVIHTVGPIYDADSNPEASLRNAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVALSTVKEFAN-----DF 231 (257)
Q Consensus 157 L~~k~IIH~V~P~~~~~~~~~~~L~~~y~~~L~~A~~~~~~SIAfP~LgTG~~g~p~~~~A~~~l~ai~~fl~-----~l 231 (257)
||||||||+|+|.|+. ....+.|++||++||++|.+++++|||||+||||++|||++++|++|++++++|++ .+
T Consensus 89 L~~k~VIH~vgP~~~~-~~~~~~L~~~y~~~L~~a~~~~~~SIAfP~IstG~~g~p~~~aa~i~~~~v~~~l~~~~~~~l 167 (193)
T 1yd9_A 89 LPAKFVIHCNSPVWGS-DKCEELLEKTVKNCLALADDRKLKSIAFPSIGSGRNGFPKQTAAQLILKAISSYFVSTMSSSI 167 (193)
T ss_dssp SSSSEEEEECCCCTTS-TTHHHHHHHHHHHHHHHHHHTTCSEEEECCCSBSTTCBCHHHHHHHHHHHHHHHHTTCTTCCC
T ss_pred CCCCEEEEeCCCCcCC-cchHHHHHHHHHHHHHHHHHhCCceEeecccccCCCCCCHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 9999999999999975 34678999999999999999999999999999999999999999999999999985 47
Q ss_pred CeEEEEecChHHHHHHHHHHHHH
Q 025149 232 KEVHFVLFSDDIYNVWLNKAKEL 254 (257)
Q Consensus 232 ~~V~fv~~~~~~~~~f~~~~~~~ 254 (257)
++|+||+|+++++++|.++++++
T Consensus 168 ~~V~fv~~~~~~~~~~~~~l~~~ 190 (193)
T 1yd9_A 168 KTVYFVLFDSESIGIYVQEMAKL 190 (193)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT
T ss_pred CEEEEEECCHHHHHHHHHHHHhh
Confidence 89999999999999999998764
No 6
>2xd7_A Core histone macro-H2A.2; chromosomal protein, nucleosome core, chromatin regulator, nucleus, DNA-binding protein, phosphoprotein; 2.09A {Homo sapiens}
Probab=100.00 E-value=2.6e-46 Score=320.95 Aligned_cols=170 Identities=25% Similarity=0.403 Sum_probs=157.5
Q ss_pred cCCCceEEEEEccccee---ccCCCCcEEEEcCCCCCCCCCcHHHHHHHHhChHHHHHHhhcCccCCCcccCCCcEEEee
Q 025149 77 LSESAALVINKGDITKW---SVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELREACCKVPEVRPEVRCPIGEARITP 153 (257)
Q Consensus 77 ~~~n~~I~I~~GDIt~~---~v~~~~DaIVNaaN~~l~~~gGvs~aI~~aaG~~l~~e~~~~~~~~~~~~~~~G~v~iT~ 153 (257)
+..+.+|++++||||++ ++ |||||+||+.+.++|||++||++++|++|++||+++++. .+++++|++++|+
T Consensus 15 ~~~~~~i~i~~GDIt~~~~~~~----DaIVNaaN~~l~~ggGv~~aI~~aaG~~l~~ec~~~~~~--~g~~~~G~a~iT~ 88 (193)
T 2xd7_A 15 LVLGQKLSLTQSDISHIGSMRV----EGIVHPTTAEIDLKEDIGKALEKAGGKEFLETVKELRKS--QGPLEVAEAAVSQ 88 (193)
T ss_dssp CTTSCEEEEEECCGGGGGGCCC----SEEEEEECTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHH--TCSCCTTCEEEEE
T ss_pred cCCCCEEEEEeCcccccCCCCC----CEEEECCCccCCCccHHHHHHHHHhhHHHHHHHHHHHHH--cCCCCCCCeEEee
Confidence 44478999999999999 76 999999999999999999999999999999999987643 2379999999999
Q ss_pred CCCCCCCeEEEEeCCccCCCCCcHHHHHHHHHHHHHHHHHcCCcEEEecccccCCCCCCHHHHHHHHHHHHHHHhc----
Q 025149 154 GFKLPASHVIHTVGPIYDADSNPEASLRNAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVALSTVKEFAN---- 229 (257)
Q Consensus 154 ag~L~~k~IIH~V~P~~~~~~~~~~~L~~~y~~~L~~A~~~~~~SIAfP~LgTG~~g~p~~~~A~~~l~ai~~fl~---- 229 (257)
+|+||||||||+|||.|+.. ...+.|++||++||++|.+++++|||||+||||++|||++++|++|++++++|++
T Consensus 89 ~~~L~~k~VIH~vgP~~~~~-~~~~~L~~~y~~~L~~a~~~~~~SIAfP~IstG~~g~p~~~aa~i~~~~v~~~l~~~~~ 167 (193)
T 2xd7_A 89 SSGLAAKFVIHCHIPQWGSD-KCEEQLEETIKNCLSAAEDKKLKSVAFPPFPSGRNCFPKQTAAQVTLKAISAHFDDSSA 167 (193)
T ss_dssp CTTSSSSEEEEEECCCTTST-THHHHHHHHHHHHHHHHHHTTCSEEEECCCCCSTTCCCHHHHHHHHHHHHHHHHHHCSS
T ss_pred CCCCCCCEEEEECCCcCCCc-chHHHHHHHHHHHHHHHHHcCCCEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999754 5678999999999999999999999999999999999999999999999999985
Q ss_pred -CCCeEEEEecChHHHHHHHHHHHH
Q 025149 230 -DFKEVHFVLFSDDIYNVWLNKAKE 253 (257)
Q Consensus 230 -~l~~V~fv~~~~~~~~~f~~~~~~ 253 (257)
.+++|+||+|+++++++|++++++
T Consensus 168 ~~l~~V~fv~~~~~~~~~~~~~l~~ 192 (193)
T 2xd7_A 168 SSLKNVYFLLFDSESIGIYVQEMAK 192 (193)
T ss_dssp CCCCEEEEEECSHHHHHHHHHHHHC
T ss_pred CCCCEEEEEECCHHHHHHHHHHHhh
Confidence 388999999999999999998874
No 7
>2x47_A Macro domain-containing protein 1; signaling protein, signal transduction, estrogen signaling; 1.70A {Homo sapiens}
Probab=100.00 E-value=2e-45 Score=324.06 Aligned_cols=172 Identities=40% Similarity=0.727 Sum_probs=159.2
Q ss_pred eeecCC--CceEEEEEcccceeccCCCCcEEEEcCCCCCCCCCcHHHHHHHHhChHHHHHHhhcCccCCCcccCCCcEEE
Q 025149 74 HFKLSE--SAALVINKGDITKWSVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELREACCKVPEVRPEVRCPIGEARI 151 (257)
Q Consensus 74 ~f~~~~--n~~I~I~~GDIt~~~v~~~~DaIVNaaN~~l~~~gGvs~aI~~aaG~~l~~e~~~~~~~~~~~~~~~G~v~i 151 (257)
.|+... |.+|+|++||||++++ |||||+||+.+.++|||++||++++|++|++||+++. .+++|++++
T Consensus 53 ~~~~~~~~~~~i~i~~GDIt~~~v----DaIVNaAN~~l~~ggGV~~AI~~aaG~~l~~ec~~~g------~~~~G~a~i 122 (235)
T 2x47_A 53 RYKKDKQLNEKISLLRSDITKLEV----DAIVNAANSSLLGGGGVDGCIHRAAGPLLTDECRTLQ------SCKTGKAKI 122 (235)
T ss_dssp CCCCCHHHHTTEEEEESCGGGEES----SEEEEECCTTCSCCSHHHHHHHHHHCHHHHHHHHTSC------CCCBTCEEE
T ss_pred CCCcccccCCEEEEEeCccCcccC----CEEEEecCcccCCccHHHHHHHHHhCHHHHHHHHHhC------CCCCCceEE
Confidence 444443 6899999999999976 9999999999999999999999999999999998752 699999999
Q ss_pred eeCCCCCCCeEEEEeCCccCCCC--CcHHHHHHHHHHHHHHHHHcCCcEEEecccccCCCCCCHHHHHHHHHHHHHHHhc
Q 025149 152 TPGFKLPASHVIHTVGPIYDADS--NPEASLRNAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVALSTVKEFAN 229 (257)
Q Consensus 152 T~ag~L~~k~IIH~V~P~~~~~~--~~~~~L~~~y~~~L~~A~~~~~~SIAfP~LgTG~~g~p~~~~A~~~l~ai~~fl~ 229 (257)
|++|+||||||||+|||.|+++. ...+.|++||++||++|.+++++|||||+||||++|||++++|++|++++++|++
T Consensus 123 T~~~~L~~k~VIH~vgP~~~~~~~~~~~~~L~~~y~~~L~~A~e~~i~SIAfP~IstG~~g~p~~~aa~i~~~~v~~fl~ 202 (235)
T 2x47_A 123 TGGYRLPAKYVIHTVGPIAYGEPSASQAAELRSCYLSSLDLLLEHRLRSVAFPCISTGVFGYPCEAAAEIVLATLREWLE 202 (235)
T ss_dssp EECTTSSSSEEEEEBCCCCTTCCCHHHHHHHHHHHHHHHHHHHHTTCCEEEECCTTCSTTSCCHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCCCEEEEecCccccCCCCcchHHHHHHHHHHHHHHHHHhCCceEEeccccCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999997632 3568999999999999999999999999999999999999999999999999985
Q ss_pred ----CCCeEEEEecChHHHHHHHHHHHHHh
Q 025149 230 ----DFKEVHFVLFSDDIYNVWLNKAKELL 255 (257)
Q Consensus 230 ----~l~~V~fv~~~~~~~~~f~~~~~~~~ 255 (257)
.+++|+||+|+++++++|.+.++.+|
T Consensus 203 ~~~~~l~~V~fv~f~~~~~~~y~~~l~~~f 232 (235)
T 2x47_A 203 QHKDKVDRLIICVFLEKDEDIYRSRLPHYF 232 (235)
T ss_dssp HHGGGCSEEEEEECSHHHHHHHHHHHHHHS
T ss_pred hCCCCCCeEEEEECCHHHHHHHHHHHHHhc
Confidence 48899999999999999999999987
No 8
>3kh6_A Poly [ADP-ribose] polymerase 15; macro, PARP, BAL3, B-aggressive lymphoma protein 3, SGC, structural genomics consortium, alternative splicing; HET: APR; 2.20A {Homo sapiens} PDB: 3v2b_A*
Probab=100.00 E-value=1.1e-43 Score=305.59 Aligned_cols=167 Identities=23% Similarity=0.369 Sum_probs=154.1
Q ss_pred CCCCCceeecCCCceEEEEEcccceeccCCCCcEEEEcCCCCCCCCCcHHHHHHHHhChHHHHHHhhcCccCCCcccCCC
Q 025149 68 QRSEDGHFKLSESAALVINKGDITKWSVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELREACCKVPEVRPEVRCPIG 147 (257)
Q Consensus 68 ~~~~~~~f~~~~n~~I~I~~GDIt~~~v~~~~DaIVNaaN~~l~~~gGvs~aI~~aaG~~l~~e~~~~~~~~~~~~~~~G 147 (257)
+....+.+++. +.+|++++||||++++ |||||+||+.+.+++||++||++++|++|++||+++. .+++|
T Consensus 21 ~~~~~~~~~i~-~~~i~i~~GDIt~~~v----DaIVNaaN~~l~~ggGV~~AI~~aaG~~l~~ec~~~~------~~~~G 89 (199)
T 3kh6_A 21 QSMTAYEMKIG-AITFQVATGDIATEQV----DVIVNSTARTFNRKSGVSRAILEGAGQAVESECAVLA------AQPHR 89 (199)
T ss_dssp CCCCEEEEEET-TEEEEEEESCGGGCCS----SEEEEEECTTSCCCSTHHHHHHHHHCHHHHHHHHHHH------TSCCC
T ss_pred CCCCceEEEEC-CEEEEEEecccccCcC----CEEEECCCCCCCCCchHHHHHHHHhhHHHHHHHHHhC------CCCCC
Confidence 44445666666 4999999999999876 9999999999999999999999999999999999864 68999
Q ss_pred cEEEeeCCCCCCCeEEEEeCCccCCCCCcHHHHHHHHHHHHHHHHHcCCcEEEecccccCCCCCCHHHHHHHHHHHHHHH
Q 025149 148 EARITPGFKLPASHVIHTVGPIYDADSNPEASLRNAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVALSTVKEF 227 (257)
Q Consensus 148 ~v~iT~ag~L~~k~IIH~V~P~~~~~~~~~~~L~~~y~~~L~~A~~~~~~SIAfP~LgTG~~g~p~~~~A~~~l~ai~~f 227 (257)
++++|++|+||||||||+|+|. .|++||++||+.|.+++++|||||+||||++|||++++|++|++++++|
T Consensus 90 ~a~iT~g~~L~~k~VIH~vgp~---------~L~~~y~~~L~~a~~~~i~SIAfP~IgtG~~G~p~~~aa~i~~~~v~~f 160 (199)
T 3kh6_A 90 DFIITPGGCLKCKIIIHVPGGK---------DVRKTVTSVLEECEQRKYTSVSLPAIGTGNAGKNPITVADNIIDAIVDF 160 (199)
T ss_dssp SSEEEECTTSSSSEEEEEETTS---------CHHHHHHHHHHHHHHTTCCEEEECCTTSSTTCCCHHHHHHHHHHHHHHH
T ss_pred eEEEecCCCCCCCEEEEeCCCH---------HHHHHHHHHHHHHHHcCCCEEeecccccCCCCcCHHHHHHHHHHHHHHH
Confidence 9999999999999999999984 4999999999999999999999999999999999999999999999999
Q ss_pred hc-----CCCeEEEEecChHHHHHHHHHHHHH
Q 025149 228 AN-----DFKEVHFVLFSDDIYNVWLNKAKEL 254 (257)
Q Consensus 228 l~-----~l~~V~fv~~~~~~~~~f~~~~~~~ 254 (257)
++ .+++|+||+|+++++++|.+++++.
T Consensus 161 l~~~~~~~l~~V~fv~f~~~~~~~f~~~l~~~ 192 (199)
T 3kh6_A 161 SSQHSTPSLKTVKVVIFQPELLNIFYDSMKKR 192 (199)
T ss_dssp HHHCSSCSCCEEEEEESSTHHHHHHHHHHHTT
T ss_pred HHhcCCCCCCEEEEEECCHHHHHHHHHHHHhc
Confidence 85 4789999999999999999999864
No 9
>2dx6_A Hypothetical protein TTHA0132; conserved hypothetical protein, structural genomics, NPPSFA; 1.78A {Thermus thermophilus} PDB: 3v45_A
Probab=100.00 E-value=2.4e-43 Score=293.57 Aligned_cols=158 Identities=32% Similarity=0.442 Sum_probs=148.8
Q ss_pred ceEEEEEcccceeccCCCCcEEEEcCCCCCCCCCcHHHHHHHHhChHHHHHHhhcCccCCCcccCCCcEEEeeCCCCCCC
Q 025149 81 AALVINKGDITKWSVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELREACCKVPEVRPEVRCPIGEARITPGFKLPAS 160 (257)
Q Consensus 81 ~~I~I~~GDIt~~~v~~~~DaIVNaaN~~l~~~gGvs~aI~~aaG~~l~~e~~~~~~~~~~~~~~~G~v~iT~ag~L~~k 160 (257)
.+|++++||||++++ |||||++|+.+.+++||+++|++++|++++++|++.. ++++|++++|++++||||
T Consensus 2 ~~i~i~~GDI~~~~~----daIVnaaN~~l~~ggGv~~aI~~~~G~~l~~~c~~~g------~~~~G~a~it~~~~L~~~ 71 (159)
T 2dx6_A 2 ARIRVVQGDITEFQG----DAIVNAANNYLKLGAGVAGAILRKGGPSIQEECDRIG------KIRVGEAAVTGAGNLPVR 71 (159)
T ss_dssp CEEEEEESCGGGCCS----SEEEEEEETTCCCCSTTHHHHHHHHCTHHHHHHHHHC------CCCTTCEEEEECTTSSSS
T ss_pred eEEEEEECcCCcCCC----CEEEECCCCCCCCCchHHHHHHHHhCHHHHHHHHhcC------CCCCCcEEEecCCCCCCC
Confidence 368999999999876 9999999999999999999999999999999999752 699999999999999999
Q ss_pred eEEEEeCCccCCCCCcHHHHHHHHHHHHHHHHHcCCcEEEecccccCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEecC
Q 025149 161 HVIHTVGPIYDADSNPEASLRNAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVALSTVKEFANDFKEVHFVLFS 240 (257)
Q Consensus 161 ~IIH~V~P~~~~~~~~~~~L~~~y~~~L~~A~~~~~~SIAfP~LgTG~~g~p~~~~A~~~l~ai~~fl~~l~~V~fv~~~ 240 (257)
||||+|+|.|+ . .+.+.|++||++||+.|.+++++|||||+||||++|+|+++++++|++++++| ..+++|+||+|+
T Consensus 72 ~Vih~vgp~~~-~-~~~~~L~~~~~~~L~~a~~~~~~sIa~P~igtG~~g~p~~~~a~i~~~~~~~~-~~~~~V~~v~~~ 148 (159)
T 2dx6_A 72 YVIHAAVLGDE-P-ASLETVRKATKSALEKAVELGLKTVAFPLLGTGVGGLPVEAVARVMLEEIKKA-PDTLEVTLYGYR 148 (159)
T ss_dssp EEEEEEEESSS-C-CCHHHHHHHHHHHHHHHHHTTCSEEEECCTTSSTTCCCHHHHHHHHHHHHTTS-CTTCEEEEEESS
T ss_pred EEEEEeCCCCC-C-chHHHHHHHHHHHHHHHHHcCCcEEEECCccCCCCCCCHHHHHHHHHHHHHhc-CCCCEEEEEECC
Confidence 99999999998 2 45789999999999999999999999999999999999999999999999999 778999999999
Q ss_pred hHHHHHHHHHH
Q 025149 241 DDIYNVWLNKA 251 (257)
Q Consensus 241 ~~~~~~f~~~~ 251 (257)
+++++.|++.+
T Consensus 149 ~~~~~~~~~~l 159 (159)
T 2dx6_A 149 EEDAEAIRRAL 159 (159)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhC
Confidence 99999998753
No 10
>1vhu_A Hypothetical protein AF1521; structural genomics, unknown function; HET: MSE MES; 1.34A {Archaeoglobus fulgidus} SCOP: c.50.1.2 PDB: 2bfq_A* 1hjz_A* 2bfr_A*
Probab=100.00 E-value=2.4e-43 Score=306.33 Aligned_cols=174 Identities=33% Similarity=0.465 Sum_probs=157.3
Q ss_pred ecCCCceEEEEEcccceeccCCCCcEEEEcCCCCCCCCCcHHHHHHHHhC----hHHHHHHhhcCccCCCcccCCCcEEE
Q 025149 76 KLSESAALVINKGDITKWSVDGSSDAIVNPANERMLGGGGADGAIHRAAG----PELREACCKVPEVRPEVRCPIGEARI 151 (257)
Q Consensus 76 ~~~~n~~I~I~~GDIt~~~v~~~~DaIVNaaN~~l~~~gGvs~aI~~aaG----~~l~~e~~~~~~~~~~~~~~~G~v~i 151 (257)
++. +.+|++++||||++++ |||||+||+.+.+++||++||++++| ++|+++|+++++..++..+++|++++
T Consensus 17 ~~~-~~~i~i~~GDIt~~~v----DaIVNaaN~~l~~ggGV~~aI~~aaG~~~~~~l~~ec~~~~~~~g~~~~~~G~a~i 91 (211)
T 1vhu_A 17 KVG-DITLKLAQGDITQYPA----KAIVNAANKRLEHGGGVAYAIAKACAGDAGLYTEISKKAMREQFGRDYIDHGEVVV 91 (211)
T ss_dssp EET-TEEEEEEESCGGGSCC----SEEEEEECTTCCCCSHHHHHHHHHHHSSHHHHHHHHHHHHHHHHSSSCCCTTCCEE
T ss_pred eEC-CEEEEEEecccCcCCC----CEEEECCCccccCccHHHHHHHHHhCCCchHHHHHHHHHHHHHcCCCcccCCcEEE
Confidence 454 4799999999999976 99999999999999999999999999 99999999865422111299999999
Q ss_pred eeCCCCCC---CeEEEEeCC----ccCCCCCcHHHHHHHHHHHHHHHHHcCCcEEEecccccCCCCCCHHHHHHHHHHHH
Q 025149 152 TPGFKLPA---SHVIHTVGP----IYDADSNPEASLRNAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVALSTV 224 (257)
Q Consensus 152 T~ag~L~~---k~IIH~V~P----~~~~~~~~~~~L~~~y~~~L~~A~~~~~~SIAfP~LgTG~~g~p~~~~A~~~l~ai 224 (257)
|++++||| |||||+||| .|.+ ...+.|++||++||+.|.+++++|||||+||||++|||++++|++|++++
T Consensus 92 T~~~~L~~~g~k~VIH~vgP~~~~~~~~--~~~~~L~~~y~~~L~~A~~~~i~SIAfP~IstG~~G~p~~~aa~i~~~~v 169 (211)
T 1vhu_A 92 TPAMNLEERGIKYVFHTVGPICSGMWSE--ELKEKLYKAFLGPLEKAEEMGVESIAFPAVSAGIYGCDLEKVVETFLEAV 169 (211)
T ss_dssp EECGGGGGGTCCEEEEEECCCCTTCCCH--HHHHHHHHHHHHHHHHHHHHTCCEEEECCTTSSTTCCCHHHHHHHHHHHH
T ss_pred EECCCCCccCcCEEEEecCCccccccCc--chHHHHHHHHHHHHHHHHHcCCCEEEeccccCCCCCCCHHHHHHHHHHHH
Confidence 99999999 999999999 8853 46789999999999999999999999999999999999999999999999
Q ss_pred HHHhc-CCCeEEEEecChHHHHHHHHHHHHHhh
Q 025149 225 KEFAN-DFKEVHFVLFSDDIYNVWLNKAKELLE 256 (257)
Q Consensus 225 ~~fl~-~l~~V~fv~~~~~~~~~f~~~~~~~~~ 256 (257)
++|++ ++++|+||+|+++.+++|.+.++.+++
T Consensus 170 ~~~l~~~l~~V~~v~~~~~~~~~~~~~l~~~~~ 202 (211)
T 1vhu_A 170 KNFKGSAVKEVALVIYDRKSAEVALKVFERSLE 202 (211)
T ss_dssp HHCCCSSCCEEEEEESSHHHHHHHHHHHHHHC-
T ss_pred HHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhc
Confidence 99984 278999999999999999999998874
No 11
>3eti_A X (ADRP) domain, macro domain of non-structural protein 3; coronavirus, X domain, RNA binding protein; 2.20A {Feline infectious peritonitis virus} PDB: 3ew5_A* 3jzt_A*
Probab=100.00 E-value=1.3e-43 Score=297.88 Aligned_cols=155 Identities=23% Similarity=0.271 Sum_probs=142.5
Q ss_pred CceEEEEEcccce----eccCCCCcEEEEcCCCCCCCCCcHHHHHHHHhChHHHHHHhhcCccCCCcccCCCcEEEeeCC
Q 025149 80 SAALVINKGDITK----WSVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELREACCKVPEVRPEVRCPIGEARITPGF 155 (257)
Q Consensus 80 n~~I~I~~GDIt~----~~v~~~~DaIVNaaN~~l~~~gGvs~aI~~aaG~~l~~e~~~~~~~~~~~~~~~G~v~iT~ag 155 (257)
..+|++++||||+ +++ |||||+||+.|.++|||++||++++|++|++||+++++.+ +++++|++++|++|
T Consensus 9 ~~~i~l~~GDIt~~~~~~~v----DaIVNaAN~~l~~ggGV~~AI~~aaG~~l~~ec~~~~~~~--g~~~~G~a~iT~g~ 82 (168)
T 3eti_A 9 AGKVSFYQGDLDVLINFLEP----DVLVNAANGDLRHVGGVARAIDVFTGGKLTKRSKEYLKSS--KAIAPGNAVLFENV 82 (168)
T ss_dssp ETTEEEEESCHHHHHHHHCC----SEEEEEECTTCCCCSTTHHHHHHHTTTHHHHHHHHHHTTS--CCCCTTEEEEEEEE
T ss_pred CCeEEEEeCcccccCCCCCC----CEEEeCCCcccCCCchHHHHHHHHHHHHHHHHHHHHHHHc--CCCCCCCEEEecCC
Confidence 4689999999999 665 9999999999999999999999999999999999987432 47999999999999
Q ss_pred CCCCCeEEEEeCCccCCCCCcHHHHHHHHHHHHHHHHHcCCcEEEecccccCCCCCCHHHHHHHHHHHHHHHhcCCCeEE
Q 025149 156 KLPASHVIHTVGPIYDADSNPEASLRNAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVALSTVKEFANDFKEVH 235 (257)
Q Consensus 156 ~L~~k~IIH~V~P~~~~~~~~~~~L~~~y~~~L~~A~~~~~~SIAfP~LgTG~~g~p~~~~A~~~l~ai~~fl~~l~~V~ 235 (257)
|||+||||+|||.|... ...+.|++||++||+. .+|||||+||||+||||++++|++|++++++ ++|+
T Consensus 83 -l~~~~VIHtVgP~~~~~-~~~~~L~~~y~~~L~~-----~~SIAfP~IstG~~g~P~~~aa~i~~~~v~~-----~~V~ 150 (168)
T 3eti_A 83 -LEHLSVMNAVGPRNGDS-RVEGKLCNVYKAIAKC-----DGKILTPLISVGIFKVKLEVSLQCLLKTVTD-----RDLN 150 (168)
T ss_dssp -ETTEEEEEEECCCTTST-THHHHHHHHHHHHHTS-----CSCEEECCTTBSTTCBCHHHHHHHHHHHCCS-----SCEE
T ss_pred -CCccEEEEecCCCCCcc-hHHHHHHHHHHHHHHh-----cCceeecccccCCCCCCHHHHHHHHHHHHhc-----CeEE
Confidence 99999999999999653 4578999999999974 4899999999999999999999999999987 7999
Q ss_pred EEecChHHHHHHHHHHH
Q 025149 236 FVLFSDDIYNVWLNKAK 252 (257)
Q Consensus 236 fv~~~~~~~~~f~~~~~ 252 (257)
||+|+++++++|++.+.
T Consensus 151 ~v~f~~~~~~~~~~~l~ 167 (168)
T 3eti_A 151 VFVYTDQERVTIENFFN 167 (168)
T ss_dssp EEECCHHHHHHHHHHHH
T ss_pred EEEcCHHHHHHHHHHhc
Confidence 99999999999998764
No 12
>3gqe_A Non-structural protein 3; macro domain, X domain, venezuelan equine encephalitis virus alphavirus; HET: BCN; 2.30A {Venezuelan equine encephalitis virus} PDB: 3gqo_A*
Probab=100.00 E-value=3.2e-41 Score=283.21 Aligned_cols=157 Identities=21% Similarity=0.324 Sum_probs=141.7
Q ss_pred CceEEEEEcccceeccCCCCcEEEEcCCCCCCCCCcHHHHHHHHhChHHHHHHhhcCccCCCcccCCCcEEEeeCCCCCC
Q 025149 80 SAALVINKGDITKWSVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELREACCKVPEVRPEVRCPIGEARITPGFKLPA 159 (257)
Q Consensus 80 n~~I~I~~GDIt~~~v~~~~DaIVNaaN~~l~~~gGvs~aI~~aaG~~l~~e~~~~~~~~~~~~~~~G~v~iT~ag~L~~ 159 (257)
+.+|++|+||||++++ |||||+||+.|.+++||++||++++|++++ .+++++|++++|++ +|
T Consensus 3 ~~~i~v~~GDIt~~~v----DAIVNaAN~~l~~ggGV~~aI~~aaG~~l~-----------~~~~~~G~a~iT~~---~~ 64 (168)
T 3gqe_A 3 APSYHVVRGDIATATE----GVIINAANSKGQPGGGVCGALYKKFPESFD-----------LQPIEVGKARLVKG---AA 64 (168)
T ss_dssp CCEEEEEESCGGGCCS----SEEEEEECTTSCCTTGGGSHHHHHCGGGCC-----------CCCCCTTCEEEECC---TT
T ss_pred CCeEEEEeCcccCccc----CEEEeCCCcccCCCccHHHHHHHHhhHHhc-----------CCCcCCCcEEEEcC---CC
Confidence 5899999999999976 999999999999999999999999999652 23799999999998 49
Q ss_pred CeEEEEeCCccCCCCC--cHHHHHHHHHHHHHHHHHcCCcEEEecccccCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEE
Q 025149 160 SHVIHTVGPIYDADSN--PEASLRNAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVALSTVKEFANDFKEVHFV 237 (257)
Q Consensus 160 k~IIH~V~P~~~~~~~--~~~~L~~~y~~~L~~A~~~~~~SIAfP~LgTG~~g~p~~~~A~~~l~ai~~fl~~l~~V~fv 237 (257)
|||||+|||.|+++.. ..+.|++||++||++|.+++++|||||+||||+||||++++|+.|.+.+..+-.++++|+||
T Consensus 65 k~VIH~VgP~~~~~~~~~~~~~L~~~y~~~L~~a~~~~~~SIAfP~IstG~~g~p~~~aa~~i~~~l~~~~~~~~~V~iv 144 (168)
T 3gqe_A 65 KHIIHAVGPNFNKVSEVEGDKQLAEAYESIAKIVNDNNYKSVAIPLLSTGIFSGNKDRLTQSLNHLLTALDTTDADVAIY 144 (168)
T ss_dssp CCEEEEECCCTTTSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECTTSSTTSCSSCCHHHHHHHHHHHHTTSCCEEEEE
T ss_pred CEEEEcCCCccCCCCchhHHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHCCCCCCeEEEE
Confidence 9999999999987652 25789999999999999999999999999999999999999998777666665678899999
Q ss_pred ecChHHHHHHHHHHHHH
Q 025149 238 LFSDDIYNVWLNKAKEL 254 (257)
Q Consensus 238 ~~~~~~~~~f~~~~~~~ 254 (257)
+|+++.++.|++++.+.
T Consensus 145 ~fd~~~~~~~~~~~~~~ 161 (168)
T 3gqe_A 145 CRDKKWEMTLKEAVARR 161 (168)
T ss_dssp ESCHHHHHHHHHHHHHC
T ss_pred EcCHHHHHHHHHHHHhh
Confidence 99999999999988764
No 13
>3gpg_A NSP3, non-structural protein 3; macro domain, X domain, alphavirus, VIZI enzymes involved in replication, ATP-binding, cell membrane endosome; 1.65A {Chikungunya virus} PDB: 3gpo_A* 3gpq_A
Probab=100.00 E-value=1.1e-41 Score=286.05 Aligned_cols=155 Identities=21% Similarity=0.258 Sum_probs=140.3
Q ss_pred CceEEEEEcccceeccCCCCcEEEEcCCCCCCCCCcHHHHHHHHhChHHHHHHhhcCccCCCcccCCCcEEEeeCCCCCC
Q 025149 80 SAALVINKGDITKWSVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELREACCKVPEVRPEVRCPIGEARITPGFKLPA 159 (257)
Q Consensus 80 n~~I~I~~GDIt~~~v~~~~DaIVNaaN~~l~~~gGvs~aI~~aaG~~l~~e~~~~~~~~~~~~~~~G~v~iT~ag~L~~ 159 (257)
-+..+||+||||++++ |||||+||+.|.++|||++||++++|++++ .+++++|++++|+++ |
T Consensus 9 ~~~~~~~~GDIt~~~v----DAIVNaAN~~l~~ggGV~~aI~~aaG~~l~-----------~~~~~~G~a~iT~~~---~ 70 (168)
T 3gpg_A 9 APSYRVKRMDIAKNDE----ECVVNAANPRGLPGDGVCKAVYKKWPESFK-----------NSATPVGTAKTVMCG---T 70 (168)
T ss_dssp CCCC-CEESCGGGCCS----SCEEEECCTTCCCCSHHHHHHHHHCGGGGT-----------TCCCCTTCEEEEEET---T
T ss_pred CCceEEEeCcCCcccC----CEEEeCCCcccCCCchHHHHHHHHhhHHhh-----------cCCCCCCCEEEecCC---C
Confidence 4678899999999976 999999999999999999999999999752 237999999999994 9
Q ss_pred CeEEEEeCCccCCCCC--cHHHHHHHHHHHHHHHHHcCCcEEEecccccCCCCCCHHHHHHHHHHHHHHHhcC-CCeEEE
Q 025149 160 SHVIHTVGPIYDADSN--PEASLRNAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVALSTVKEFAND-FKEVHF 236 (257)
Q Consensus 160 k~IIH~V~P~~~~~~~--~~~~L~~~y~~~L~~A~~~~~~SIAfP~LgTG~~g~p~~~~A~~~l~ai~~fl~~-l~~V~f 236 (257)
|||||+|||.|+.+.. ..+.|++||++||++|.+++++|||||+||||+||||++++|+ +++++++|+++ +++|+|
T Consensus 71 k~VIHtVGP~~~~~~~~~~~~~L~~~y~~~L~~A~~~~~~SIAfP~IstGi~g~P~~~aa~-ai~~v~~~~~~~~~~V~f 149 (168)
T 3gpg_A 71 YPVIHAVGPNFSNYSESEGDRELAAAYREVAKEVTRLGVNSVAIPLLSTGVYSGGKDRLTQ-SLNHLFTAMDSTDADVVI 149 (168)
T ss_dssp EEEEEECCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHTCSEEEEECTTSSTTSTTSCCHHH-HC-CHHHHHTTCCSEEEE
T ss_pred CEEEEeCCCCcCCCCcchHHHHHHHHHHHHHHHHHHhCCcEEEECccccCCCCCCHHHHHH-HHHHHHHhccCCCCEEEE
Confidence 9999999999987652 2478999999999999999999999999999999999999999 89999999874 789999
Q ss_pred EecChHHHHHHHHHHHH
Q 025149 237 VLFSDDIYNVWLNKAKE 253 (257)
Q Consensus 237 v~~~~~~~~~f~~~~~~ 253 (257)
|+|++++++.|++.+++
T Consensus 150 v~f~~~~~~~y~~~l~~ 166 (168)
T 3gpg_A 150 YCRDKEWEKKISEAIQM 166 (168)
T ss_dssp EESCHHHHHHHHHHHHT
T ss_pred EECCHHHHHHHHHHHhc
Confidence 99999999999999875
No 14
>3ejg_A Non-structural protein 3; HCOV 229E, X-domain, macro domain, NSP3, ADRP, hydrolase, ribosomal frameshifting, RNA-binding; 1.78A {Human coronavirus 229E} PDB: 3ewr_A* 3ewq_A*
Probab=100.00 E-value=8.3e-41 Score=285.89 Aligned_cols=152 Identities=22% Similarity=0.298 Sum_probs=138.9
Q ss_pred CceEEEEEcccce----eccCCCCcEEEEcCCCCCCCCCcHHHHHHHHhChHHHHHHhhcCccCCCcccCCCcEEEeeCC
Q 025149 80 SAALVINKGDITK----WSVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELREACCKVPEVRPEVRCPIGEARITPGF 155 (257)
Q Consensus 80 n~~I~I~~GDIt~----~~v~~~~DaIVNaaN~~l~~~gGvs~aI~~aaG~~l~~e~~~~~~~~~~~~~~~G~v~iT~ag 155 (257)
+.+|++|+||||+ +++ |||||+||+.|.++|||++||++++|++|++||+++++. .+++++|++++|++|
T Consensus 37 ~~~i~l~~GDIt~~~~~~~v----DAIVNaAN~~L~~ggGV~~AI~~aaG~~l~~ec~~l~~~--~g~~~~G~a~iT~~~ 110 (193)
T 3ejg_A 37 HDNVAFYQGDVDTVVNGVDF----DFIVNAANENLAHGGGLAKALDVYTKGKLQRLSKEHIGL--AGKVKVGTGVMVECD 110 (193)
T ss_dssp ETTEEEEECCHHHHHHHCCC----SEEEEEECTTCCCCSHHHHHHHHHTTTHHHHHHHHHHHH--HCSCCTTCEEEEEET
T ss_pred CCeEEEEeCcccccCcCCCc----CEEEeCCCcccCCCchHHHHHHHHhhHHHHHHHHHHHHH--cCCCCCCCEEEecCC
Confidence 6799999999999 555 999999999999999999999999999999999987642 237999999999999
Q ss_pred CCCCCeEEEEeCCccCCCCCcHHHHHHHHHHHHHHHHHcCCcEEEecccccCCCCCCHHHHHHHHHHHHHHHhcCCCeEE
Q 025149 156 KLPASHVIHTVGPIYDADSNPEASLRNAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVALSTVKEFANDFKEVH 235 (257)
Q Consensus 156 ~L~~k~IIH~V~P~~~~~~~~~~~L~~~y~~~L~~A~~~~~~SIAfP~LgTG~~g~p~~~~A~~~l~ai~~fl~~l~~V~ 235 (257)
+| ||||+|||.|.. ...+.|++||++||+. .+|||||+||||+||||++++|+++++++++ .+|+
T Consensus 111 ~L---~VIHtVGP~~~~--~~~~~L~~~y~~~L~~-----~~SIAfPaIstGi~G~P~~~aa~ial~~v~~-----~~V~ 175 (193)
T 3ejg_A 111 SL---RIFNVVGPRKGK--HERDLLIKAYNTINNE-----QGTPLTPILSCGIFGIKLETSLEVLLDVCNT-----KEVK 175 (193)
T ss_dssp TE---EEEEEECCCSST--THHHHHHHHHHHHHHS-----SSCEEECCTTCGGGCCCHHHHHHHHHHHCCS-----SCEE
T ss_pred Ce---eEEEecCCCCCc--hHHHHHHHHHHHHHHh-----cCceeecccccCCCCCCHHHHHHHHHHHHhc-----CeEE
Confidence 99 999999999965 4678999999999973 3799999999999999999999999999988 4999
Q ss_pred EEecChHHHHHHHHHHH
Q 025149 236 FVLFSDDIYNVWLNKAK 252 (257)
Q Consensus 236 fv~~~~~~~~~f~~~~~ 252 (257)
||+|+++++++|++.+.
T Consensus 176 fv~f~~~~~~~~~~~l~ 192 (193)
T 3ejg_A 176 VFVYTDTEVCKVKDFVS 192 (193)
T ss_dssp EEECSHHHHHHHHHHHH
T ss_pred EEEcCHHHHHHHHHHhc
Confidence 99999999999998764
No 15
>2acf_A Replicase polyprotein 1AB; ADRP domain, SARS NSP-3, APPR-1-P phosphatase, structural GE joint center for structural genomics, JCSG; 1.40A {Sars coronavirus TOR2} SCOP: c.50.1.2 PDB: 2fav_A*
Probab=100.00 E-value=1.4e-40 Score=282.84 Aligned_cols=158 Identities=25% Similarity=0.395 Sum_probs=138.3
Q ss_pred ceeecCCCceEEEEEccccee----ccCCCCcEEEEcCCCCCCCCCcHHHHHHHHhChHHHHHHhhcCccCCCcccCCCc
Q 025149 73 GHFKLSESAALVINKGDITKW----SVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELREACCKVPEVRPEVRCPIGE 148 (257)
Q Consensus 73 ~~f~~~~n~~I~I~~GDIt~~----~v~~~~DaIVNaaN~~l~~~gGvs~aI~~aaG~~l~~e~~~~~~~~~~~~~~~G~ 148 (257)
..|.+ +.+|++++||||++ ++ |||||+||+.|.++|||++||++++|++|++||+++++. .+++++|+
T Consensus 14 ~~~~~--~~~i~i~~GDIt~~~~~~~v----DAIVNaAN~~l~~ggGV~~AI~~aaG~~l~~ec~~~~~~--~g~~~~G~ 85 (182)
T 2acf_A 14 GYLKL--TDNVAIKCVDIVKEAQSANP----MVIVNAANIHLKHGGGVAGALNKATNGAMQKESDDYIKL--NGPLTVGG 85 (182)
T ss_dssp SCEEC--SSSEEEEESCHHHHHHHHCC----SEEEEECCTTCCCCSHHHHHHHHHTTTHHHHHHHHHHHH--HCCCCTTC
T ss_pred ccccc--CCeEEEEeCcccccccCCCC----CEEEECCCCCCCCCchHHHHHHHHhCHHHHHHHHHHHHH--cCCCCCCc
Confidence 34444 67899999999999 65 999999999999999999999999999999999987642 23799999
Q ss_pred EEEeeCCCCCCCeEEEEeCCccCCCCCcHHHHHHHHHHHHHHHHHcCCcEEEecccccCCCCCCHHHHHHHHHHHHHHHh
Q 025149 149 ARITPGFKLPASHVIHTVGPIYDADSNPEASLRNAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVALSTVKEFA 228 (257)
Q Consensus 149 v~iT~ag~L~~k~IIH~V~P~~~~~~~~~~~L~~~y~~~L~~A~~~~~~SIAfP~LgTG~~g~p~~~~A~~~l~ai~~fl 228 (257)
+++|++|+|+ +||||+|||.|+.+. +.+.|++||+++ ++++|||||+||||+||||++++|++|++++++
T Consensus 86 a~iT~~~~L~-~~VIH~vgP~~~~~~-~~~~L~~~y~~~------~~~~SIAfP~IstGi~G~p~~~aa~i~~~~v~~-- 155 (182)
T 2acf_A 86 SCLLSGHNLA-KKCLHVVGPNLNAGE-DIQLLKAAYENF------NSQDILLAPLLSAGIFGAKPLQSLQVCVQTVRT-- 155 (182)
T ss_dssp EEEEECTTTC-SEEEEECCCCGGGTC-CTTHHHHHHHGG------GGSSEEEECCTTCGGGCCCHHHHHHHHHHHCCS--
T ss_pred EEEeeCCCCC-ceEEEECCCCCCCCc-hHHHHHHHHHHh------cCCCEEEECCcccCCCCCCHHHHHHHHHHHHhC--
Confidence 9999999995 899999999998643 567999999986 689999999999999999999999999999885
Q ss_pred cCCCeEEEEecChHHHHHHHHHHHHHh
Q 025149 229 NDFKEVHFVLFSDDIYNVWLNKAKELL 255 (257)
Q Consensus 229 ~~l~~V~fv~~~~~~~~~f~~~~~~~~ 255 (257)
+|+||+|+++.|+ +.++.||
T Consensus 156 ----~V~~v~~d~~~y~---~~l~~~~ 175 (182)
T 2acf_A 156 ----QVYIAVNDKALYE---QVVMDYL 175 (182)
T ss_dssp ----EEEEEESCHHHHH---HHHHHHC
T ss_pred ----cEEEEECCHHHHH---HHHHHhC
Confidence 9999999998554 4455555
No 16
>3ejf_A Non-structural protein 3; IBV, coronavirus, X-domain, macro domain, NSP3, ADRP, hydrolase, ribosomal frameshifting; 1.60A {Avian infectious bronchitis virus} PDB: 3eke_A* 3ewo_A 3ewp_A*
Probab=100.00 E-value=2e-40 Score=280.03 Aligned_cols=162 Identities=22% Similarity=0.252 Sum_probs=139.1
Q ss_pred cCCCceEEEEEcccceeccCC----CCcEEEEcCCCCCCCCCcHHHHHHHHhChHHHHHHhhcCccCCCcccCCCcEEEe
Q 025149 77 LSESAALVINKGDITKWSVDG----SSDAIVNPANERMLGGGGADGAIHRAAGPELREACCKVPEVRPEVRCPIGEARIT 152 (257)
Q Consensus 77 ~~~n~~I~I~~GDIt~~~v~~----~~DaIVNaaN~~l~~~gGvs~aI~~aaG~~l~~e~~~~~~~~~~~~~~~G~v~iT 152 (257)
...+..|++|+||||+++||+ ++|||||+||+.|.++|||++||+++||++|++||+++++.+ ++++ +++|
T Consensus 10 ~~~~~~i~v~~GDIt~~~vDa~~~~~~DaIVNaAN~~L~~ggGV~~AI~~aaG~~l~~ec~~~~~~~--g~~~---a~iT 84 (176)
T 3ejf_A 10 KPKFLEYKTCVGDLTVVIAKALDEFKEFCIVNAANEHMTHGSGVAKAIADFCGLDFVEYCEDYVKKH--GPQQ---RLVT 84 (176)
T ss_dssp CCSSCEEEEEESCHHHHHHHHHHHHSSEEEEEECCTTCCCCSHHHHHHHHHHCHHHHHHHHHHHHHH--CCCS---EEEE
T ss_pred CCCCceEEEEeeeCeEEeecccccCCCCEEEeCCCcccCCCchHHHHHHHHhhHHHHHHHHHHHHhc--CCCC---eeec
Confidence 344789999999999998743 678999999999999999999999999999999999886432 2465 8999
Q ss_pred eCCCCCCCeEEEEeCCccCCCCCcHHHHHHHHHHHHHHHHHcCCcEEEecccccCCCCCCHHHHHHHHHHHHHHHhcCCC
Q 025149 153 PGFKLPASHVIHTVGPIYDADSNPEASLRNAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVALSTVKEFANDFK 232 (257)
Q Consensus 153 ~ag~L~~k~IIH~V~P~~~~~~~~~~~L~~~y~~~L~~A~~~~~~SIAfP~LgTG~~g~p~~~~A~~~l~ai~~fl~~l~ 232 (257)
+++.|++++|||+|||.|... +.++.|++||++||+ ++++|||||+||||+||||++++|++|++++++ ..-
T Consensus 85 ~G~~l~t~~VIHtVGP~~~~~-~~~~~L~~~y~~~L~----~~~~SIAfPaIstGi~g~P~~~aA~ia~~~v~~---~~v 156 (176)
T 3ejf_A 85 PSFVKGIQCVNNVVGPRHGDN-NLHEKLVAAYKNVLV----DGVVNYVVPVLSLGIFGVDFKMSIDAMREAFEG---CTI 156 (176)
T ss_dssp CCCSTTEEEEEEECCCCTTCS-CHHHHHHHHHHTTCC----TTCCEEEEECCCTTSTTCCHHHHHHHHHHHHTT---CCC
T ss_pred ccccccCCEEEEeCCCCCCCc-cHHHHHHHHHHHHHH----cCCcEEEECccccCCCCCCHHHHHHHHHHHhhh---cce
Confidence 999999999999999999653 467899999999998 899999999999999999999999999999984 222
Q ss_pred eEEEEecChHHHHHHHHHH
Q 025149 233 EVHFVLFSDDIYNVWLNKA 251 (257)
Q Consensus 233 ~V~fv~~~~~~~~~f~~~~ 251 (257)
+|.+..+|++.+++|...+
T Consensus 157 ~v~~~~~D~e~~~~~~~~~ 175 (176)
T 3ejf_A 157 RVLLFSLSQEHIDYFDVTC 175 (176)
T ss_dssp EEEEEESCHHHHHHHHHTC
T ss_pred EEEEEcCCHHHHHHHHHHh
Confidence 4444444588899888754
No 17
>2vri_A Non-structural protein 3; RNA replication, nucleotide-binding, endonuclease, macro domain, viral protein, ATP-binding, exonuclease; 1.8A {Human coronavirus NL63}
Probab=100.00 E-value=3.2e-40 Score=278.82 Aligned_cols=165 Identities=22% Similarity=0.256 Sum_probs=144.5
Q ss_pred CCCceeecCCCceEEEEEcccceeccCCCCcEEEEcCCCCCCCCCcHHHHHHHHhChHHHHHHhhcCccCCCcccCCCcE
Q 025149 70 SEDGHFKLSESAALVINKGDITKWSVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELREACCKVPEVRPEVRCPIGEA 149 (257)
Q Consensus 70 ~~~~~f~~~~n~~I~I~~GDIt~~~v~~~~DaIVNaaN~~l~~~gGvs~aI~~aaG~~l~~e~~~~~~~~~~~~~~~G~v 149 (257)
+...+|.+ +.+|++++||||++..+.++|||||+||+.+.+++||++||++++|++|++||+++++. .+++++|++
T Consensus 8 ~~~~pf~~--~~~i~i~~GDIt~~~~~~~~DaIVNaaN~~l~~ggGv~~AI~~aaG~~l~~ec~~~~~~--~g~~~~G~a 83 (174)
T 2vri_A 8 PFTKPFAV--YKNVKFYLGDISHLVNCVSFDFVVNAANENLLHGGGVARAIDILTEGQLQSLSKDYISS--NGPLKVGAG 83 (174)
T ss_dssp EECCCSEE--ETTEEEEESCHHHHTTTSCCSEEEEEECTTCCCCSHHHHHHHHHTTTHHHHHHHHHHHH--HCSCCTTCE
T ss_pred CcCCccCC--CCeEEEEeccccccccCCCccEEEECCCccCCCCCcHhHHHHHHhhHHHHHHHHHHHHh--cCCCCCCeE
Confidence 34455655 57899999999998322245999999999999999999999999999999999987642 237999999
Q ss_pred EEeeCCCCCCCeEEEEeCCccCCCCCcHHHHHHHHHHHHHHHHHcCCcEEEecccccCCCCCCHHHHHHHHHHHHHHHhc
Q 025149 150 RITPGFKLPASHVIHTVGPIYDADSNPEASLRNAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVALSTVKEFAN 229 (257)
Q Consensus 150 ~iT~ag~L~~k~IIH~V~P~~~~~~~~~~~L~~~y~~~L~~A~~~~~~SIAfP~LgTG~~g~p~~~~A~~~l~ai~~fl~ 229 (257)
++|++++| ||||+|||.|.. . ..+.|++||++||+. .+|||||+||||++|||++++|++|++++++
T Consensus 84 ~iT~~~~l---~VIH~vgP~~~~-~-~~~~L~~~y~~~L~~-----~~SIAfP~IstG~~g~p~~~aa~i~~~~v~~--- 150 (174)
T 2vri_A 84 VMLECEKF---NVFNVVGPRTGK-H-EHSLLVEAYNSILFE-----NGIPLMPLLSCGIFGVRIENSLKALFSCDIN--- 150 (174)
T ss_dssp EEEECSSC---EEEEEECCCSST-T-HHHHHHHHHHHHHHS-----SSCEEEECSSCGGGCCCHHHHHHHHHTSCCC---
T ss_pred EEEECCCC---EEEEEcCCCCCc-c-hHHHHHHHHHHHHhh-----CCcEEeCccccCCCCCCHHHHHHHHHHHHhh---
Confidence 99999998 999999999964 2 678999999999984 3499999999999999999999999998876
Q ss_pred CCCeEEEEecChHHHHHHHHHHHH
Q 025149 230 DFKEVHFVLFSDDIYNVWLNKAKE 253 (257)
Q Consensus 230 ~l~~V~fv~~~~~~~~~f~~~~~~ 253 (257)
++|+|++|+++.+++|.+.|++
T Consensus 151 --~~V~~v~f~~~~~~~~~~~l~~ 172 (174)
T 2vri_A 151 --KPLQVFVYSSNEEQAVLKFLDG 172 (174)
T ss_dssp --SCEEEEECSHHHHHHHHHHHHT
T ss_pred --CcEEEEEcCHHHHHHHHHHHhh
Confidence 7899999999999999998865
No 18
>1njr_A 32.1 kDa protein in ADH3-RCA1 intergenic region; structural genomics, dimer, two domain organization, PSI, PR structure initiative; HET: XYL; 1.90A {Saccharomyces cerevisiae} SCOP: c.50.1.2 PDB: 1txz_A* 1ty8_A*
Probab=100.00 E-value=2.1e-38 Score=285.73 Aligned_cols=187 Identities=15% Similarity=0.122 Sum_probs=151.7
Q ss_pred cceeecchhHHHHhhhccccccCCCcceeecceeeeccCCCCCCCceeecCCCceEEEEEccccee--------c-cCCC
Q 025149 28 SRTSVSDNSLATRAKAKTISVGDRGVGVTAVSVTMSFSSDQRSEDGHFKLSESAALVINKGDITKW--------S-VDGS 98 (257)
Q Consensus 28 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~n~~I~I~~GDIt~~--------~-v~~~ 98 (257)
.+...++++++.|.++.... . +. .+.+|++++||||++ + ++++
T Consensus 20 ~l~d~~~~~v~a~~~~~~~~------------~---------------~~-~~~~i~i~~GDIt~l~~~~~~~~~~~~~~ 71 (284)
T 1njr_A 20 ILCDTNEVVTNLWQESIPHA------------Y---------------IQ-NDKYLCIHHGHLQSLMDSMRKGDAIHHGH 71 (284)
T ss_dssp EEEESCHHHHHHHHHHCC-----------------------------------CCEEEEESCHHHHHHHHHTTCC----C
T ss_pred EEECCCHHHHHHHHHHhhhh------------c---------------CC-CCCEEEEEeCCHhhhhhhccccccccCCC
Confidence 34778999999998764311 0 11 147899999999999 1 1223
Q ss_pred CcEEEEcCCCCCCCCCcHHHHHHHHhC-hHHHHHHhhcCccCCCcccCCCcEEEeeCC----------CCCCCeEEEEeC
Q 025149 99 SDAIVNPANERMLGGGGADGAIHRAAG-PELREACCKVPEVRPEVRCPIGEARITPGF----------KLPASHVIHTVG 167 (257)
Q Consensus 99 ~DaIVNaaN~~l~~~gGvs~aI~~aaG-~~l~~e~~~~~~~~~~~~~~~G~v~iT~ag----------~L~~k~IIH~V~ 167 (257)
+||||||||+.+.++|||++||++++| +.++++|+++++ .+.+++|++++|+++ +||||||||+||
T Consensus 72 vDAIVNaANs~l~~gGGVd~AI~raaGg~~l~~ec~~~~~---~g~~~~G~a~iT~~~~~~~~~~~~~~L~~k~VIHtvg 148 (284)
T 1njr_A 72 SYAIVSPGNSYGYLGGGFDKALYNYFGGKPFETWFRNQLG---GRYHTVGSATVVDLQRCLEEKTIECRDGIRYIIHVPT 148 (284)
T ss_dssp CEEEEECCBTTCCCCSSHHHHHHHHHTSHHHHHHHHHHTT---TSCCCTTCCEEEEGGGGGCC----CCTTEEEEEECCC
T ss_pred ccEEEeCCCCCCCCCchHHHHHHHhhCcHHHHHHHHHHHh---cCCCCCCeEEEEECCcccccccchhcCCCCEEEEeCC
Confidence 499999999999999999999999975 778999998763 236999999999999 999999999999
Q ss_pred CccCCCC---------CcHHHHHHHHHHHHHHHHHcCCcEEEecccccCCCCCCHHHHHHHHHHHHHHHhcCC-------
Q 025149 168 PIYDADS---------NPEASLRNAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVALSTVKEFANDF------- 231 (257)
Q Consensus 168 P~~~~~~---------~~~~~L~~~y~~~L~~A~~~~~~SIAfP~LgTG~~g~p~~~~A~~~l~ai~~fl~~l------- 231 (257)
|.|..+. ...+.|++||++||+.| +++++|||||+||||+||||++++|++|++++++|+...
T Consensus 149 p~~~~~~~~d~~~p~~~~~~~L~~~~~~~L~~a-e~~i~SIAfPaIsTGv~G~P~~~aA~i~~~av~~f~~~~~~s~~~~ 227 (284)
T 1njr_A 149 VVAPSAPIFNPQNPLKTGFEPVFNAMWNALMHS-PKDIDGLIIPGLCTGYAGVPPIISCKSMAFALRLYMAGDHISKELK 227 (284)
T ss_dssp BSCSSSCSCCTTCHHHHTHHHHHHHHHHHHHTS-CTTCSEEEECCTTCSTTCCCHHHHHHHHHHHHHHHHTGGGSCHHHH
T ss_pred CccCCCCCcccccccccHHHHHHHHHHHHHHHH-HhCCCEEEECcccccCCCCCHHHHHHHHHHHHHHHHHhCCcccccc
Confidence 9997652 13589999999999999 999999999999999999999999999999999998632
Q ss_pred CeEEEEecChHHHHHH
Q 025149 232 KEVHFVLFSDDIYNVW 247 (257)
Q Consensus 232 ~~V~fv~~~~~~~~~f 247 (257)
+.|+||.| +..|+.|
T Consensus 228 ~~vi~~~~-~~~~~~~ 242 (284)
T 1njr_A 228 NVLIMYYL-QYPFEPF 242 (284)
T ss_dssp HHHHHHHT-TCCCGGG
T ss_pred eEEEEEEC-HHHHHHH
Confidence 34666666 4445554
No 19
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=100.00 E-value=5.2e-35 Score=278.96 Aligned_cols=156 Identities=22% Similarity=0.281 Sum_probs=140.3
Q ss_pred CceEEEEEcccceeccCCCCcEEEEcCCCCCCCCCcHHHHHHHHhChHHHHHHhhcCccCCCcccCCCcEEEeeCCCCCC
Q 025149 80 SAALVINKGDITKWSVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELREACCKVPEVRPEVRCPIGEARITPGFKLPA 159 (257)
Q Consensus 80 n~~I~I~~GDIt~~~v~~~~DaIVNaaN~~l~~~gGvs~aI~~aaG~~l~~e~~~~~~~~~~~~~~~G~v~iT~ag~L~~ 159 (257)
-+...|++||||+.++ |||||+||+.+.+||||++|||+++|+++.+ +.+++|++++|+++ .
T Consensus 343 APsfrIIRgDITk~~v----DAIVNAANtsL~gGgGVdGAIhraaG~~ll~-----------~~~~tG~AkIT~g~---a 404 (670)
T 4gua_A 343 APSYRTKRENIADCQE----EAVVNAANPLGRPGEGVCRAIYKRWPTSFTD-----------SATETGTARMTVCL---G 404 (670)
T ss_dssp CCCEEEECSCGGGCCS----SEEEEECCTTCCCCSSHHHHHHHHCGGGGTT-----------CCCCTTCEEEEEET---T
T ss_pred CcceeEEecccccccc----CEEEeCCCCCCCCcCCHhHHHHHHhhHHHhc-----------CCCCcceEEEecCC---C
Confidence 5789999999999976 9999999999999999999999999988653 15789999999998 5
Q ss_pred CeEEEEeCCccCCCCCc--HHHHHHHHHHHHHHHHHcCCcEEEecccccCCCCCCHHHHHHHHHHHHHHHhcCC-CeEEE
Q 025149 160 SHVIHTVGPIYDADSNP--EASLRNAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVALSTVKEFANDF-KEVHF 236 (257)
Q Consensus 160 k~IIH~V~P~~~~~~~~--~~~L~~~y~~~L~~A~~~~~~SIAfP~LgTG~~g~p~~~~A~~~l~ai~~fl~~l-~~V~f 236 (257)
|||||+|||.|+++... .++|++||+++|++|.+++++|||||+||||+||||++ .++++++++.+|+++. .+|++
T Consensus 405 KyIIHtVGPvw~~g~~~E~~~lLascYrnsLkLA~e~~~kSIAFPLISTGIYG~PKd-al~IAl~~I~~fL~~~D~dV~I 483 (670)
T 4gua_A 405 KKVIHAVGPDFRKHPEAEALKLLQNAYHAVADLVNEHNIKSVAIPLLSTGIYAAGKD-RLEVSLNCLTTALDRTDADVTI 483 (670)
T ss_dssp EEEEEECCCCTTSSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEECCTTSSSTTTTSC-CHHHHHHHHHHHHTTSSCEEEE
T ss_pred ceEEEcCCCCccCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEEccccccCCCCCHH-HHHHHHHHHHHHHhccCCEEEE
Confidence 99999999999987743 36899999999999999999999999999999999987 5899999999999854 48999
Q ss_pred EecChHHHHHHHHHHHHH
Q 025149 237 VLFSDDIYNVWLNKAKEL 254 (257)
Q Consensus 237 v~~~~~~~~~f~~~~~~~ 254 (257)
++||++..+.++++++..
T Consensus 484 vcfDKkwe~~Ik~ai~~r 501 (670)
T 4gua_A 484 YCLDKKWKERIDAALQLK 501 (670)
T ss_dssp ECSCHHHHHHHHHHHHHH
T ss_pred EEecChHHHHHHHHHHHH
Confidence 999999888887776643
No 20
>2jyc_A Uncharacterized protein C6ORF130; macro domain, A1PP domain, BC011709, protein structure initiative, PSI-2; NMR {Homo sapiens} PDB: 2lgr_A
Probab=99.96 E-value=4.4e-29 Score=207.97 Aligned_cols=142 Identities=13% Similarity=0.203 Sum_probs=121.8
Q ss_pred cCCCceEEEEEcccceeccCCCCcEEEEcCCCCCCCCCcHHHHHHHHhChHHHHHHhhcCccCCCcccCCCcEEEeeCCC
Q 025149 77 LSESAALVINKGDITKWSVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELREACCKVPEVRPEVRCPIGEARITPGFK 156 (257)
Q Consensus 77 ~~~n~~I~I~~GDIt~~~v~~~~DaIVNaaN~~l~~~gGvs~aI~~aaG~~l~~e~~~~~~~~~~~~~~~G~v~iT~ag~ 156 (257)
+.++.+|++++||||+.+ .+|+|||++|+++.+++||+++|++++|. + .+|++. .+++|++.+|+++
T Consensus 16 ~~~~~~i~~v~GDIt~~~---~~daIVnaaN~~~~~GgGVa~ai~~~~p~-~-~e~~~~-------~~~~G~a~it~~~- 82 (160)
T 2jyc_A 16 DPEGSRITYVKGDLFACP---KTDSLAHCISEDCRMGAGIAVLFKKKFGG-V-QELLNQ-------QKKSGEVAVLKRD- 82 (160)
T ss_dssp CCCSCSEEEEESCSSSSC---SSCEEEEEECTTCCCCSSTHHHHHHHHCC-H-HHHHHH-------CCCTTCEEEEEET-
T ss_pred cCCCceEEEEeCcCCCCC---CCCEEEEccCCcCCCCCcHHHHHHHHChH-H-HHHhcc-------CCCCCcEEEEecC-
Confidence 445789999999999875 14999999999999999999999999955 4 577652 6899999999985
Q ss_pred CCCCeEEEEeCCc-cCCCCCcHHHHHHHHHHHHHHHHHcCCcEEEecccccCCCCCCHHHHHHHHHHHHHHHhcCCCeEE
Q 025149 157 LPASHVIHTVGPI-YDADSNPEASLRNAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVALSTVKEFANDFKEVH 235 (257)
Q Consensus 157 L~~k~IIH~V~P~-~~~~~~~~~~L~~~y~~~L~~A~~~~~~SIAfP~LgTG~~g~p~~~~A~~~l~ai~~fl~~l~~V~ 235 (257)
.+||||+++|. |.. ..+.+.|++||+++++.|.+++++|||||.||||++|+|+++++++|.+++.+. +|.
T Consensus 83 --~~~Vih~vg~~~~~~-~~~~~~l~~~l~~~l~~a~~~~~~sIa~P~IgtGi~G~p~~~v~~ii~~~~~~~-----~i~ 154 (160)
T 2jyc_A 83 --GRYIYYLITKKRASH-KPTYENLQKSLEAMKSHCLKNGVTDLSMPRIGCGLDRLQWENVSAMIEEVFEAT-----DIK 154 (160)
T ss_dssp --TEEEEEEECSSSTTS-CCCHHHHHHHHHHHHHHHHHHTCCEEEEESCCSSCSSSCHHHHHHHHHHHHTTS-----CCE
T ss_pred --CcEEEEEecCCCCCC-CChHHHHHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCHHHHHHHHHHHHhhC-----CCe
Confidence 69999999998 654 446789999999999999999999999999999999999999999987776542 455
Q ss_pred EEec
Q 025149 236 FVLF 239 (257)
Q Consensus 236 fv~~ 239 (257)
+++|
T Consensus 155 v~Vy 158 (160)
T 2jyc_A 155 ITVY 158 (160)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5555
No 21
>2eee_A Uncharacterized protein C6ORF130; macro domain, A1PP domain, ADP-ribose binding, rossmann fold, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l8r_A*
Probab=99.96 E-value=6.7e-29 Score=204.46 Aligned_cols=140 Identities=13% Similarity=0.212 Sum_probs=120.2
Q ss_pred CceEEEEEcccceeccCCCCcEEEEcCCCCCCCCCcHHHHHHHHhChHHHHHHhhcCccCCCcccCCCcEEEeeCCCCCC
Q 025149 80 SAALVINKGDITKWSVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELREACCKVPEVRPEVRCPIGEARITPGFKLPA 159 (257)
Q Consensus 80 n~~I~I~~GDIt~~~v~~~~DaIVNaaN~~l~~~gGvs~aI~~aaG~~l~~e~~~~~~~~~~~~~~~G~v~iT~ag~L~~ 159 (257)
+.+|++++||||+.+ .+|+|||++|+++.+++||+++|+++++ ++ ++|++ +.+++|++.+|+++ +
T Consensus 8 ~~~i~~v~GDIt~~~---~~daIVnaaN~~~~~G~Gva~ai~~~~p-~~-~~~~~-------~~~~~G~a~it~~~---~ 72 (149)
T 2eee_A 8 GSRITYVKGDLFACP---KTDSLAHCISEDCRMGAGIAVLFKKKFG-GV-QELLN-------QQKKSGEVAVLKRD---G 72 (149)
T ss_dssp SCCCEEECSCSSSSC---SSCEEEEEEETTCCCCSTTHHHHHHHTC-CH-HHHHT-------TCCCTTCEEEEESS---S
T ss_pred CeeEEEEecccccCC---CCcEEEEEeCCCCCcCCcHHHHHHHHCc-HH-HHHhc-------ccCCCccEEEEEcC---C
Confidence 578999999999975 1499999999999999999999999995 45 57764 16899999999985 7
Q ss_pred CeEEEEeCCc-cCCCCCcHHHHHHHHHHHHHHHHHcCCcEEEecccccCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEe
Q 025149 160 SHVIHTVGPI-YDADSNPEASLRNAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVALSTVKEFANDFKEVHFVL 238 (257)
Q Consensus 160 k~IIH~V~P~-~~~~~~~~~~L~~~y~~~L~~A~~~~~~SIAfP~LgTG~~g~p~~~~A~~~l~ai~~fl~~l~~V~fv~ 238 (257)
+||||+++|. |.. ..+.+.|++||+++++.|.+++++|||||.||||++|+|+++++++|.+++.+ . +|.+++
T Consensus 73 ~~Vih~v~~~~~~~-~~~~~~l~~~l~~~l~~a~~~~~~sIa~P~IgtG~~G~~~~~v~~ii~~~~~~----~-~i~v~V 146 (149)
T 2eee_A 73 RYIYYLITKKRASH-KPTYENLQKSLEAMKSHCLKNGVTDLSMPRIGCGLDRLQWENVSAMIEEVFEA----T-DIKITV 146 (149)
T ss_dssp SEEEEEEEESSTTS-CCCHHHHHHHHHHHHHHHHHHTCCEEECCCCCCTTTTCCHHHHHHHHHHHHTT----C-CCEEEE
T ss_pred CEEEEEEecCCCCC-CCCHHHHHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCHHHHHHHHHHHhcc----C-CceEEE
Confidence 9999999998 654 44678999999999999999999999999999999999999999998776653 2 466666
Q ss_pred cC
Q 025149 239 FS 240 (257)
Q Consensus 239 ~~ 240 (257)
|+
T Consensus 147 y~ 148 (149)
T 2eee_A 147 YT 148 (149)
T ss_dssp EC
T ss_pred Ee
Confidence 53
No 22
>2fg1_A Conserved hypothetical protein BT1257; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.25A {Bacteroides thetaiotaomicron} SCOP: c.50.1.2 PDB: 2afc_A
Probab=99.94 E-value=1.9e-26 Score=191.40 Aligned_cols=137 Identities=17% Similarity=0.122 Sum_probs=113.5
Q ss_pred eEEEEEcccceeccCCCCcEEEEcCCCCCCCCCcHHHHHHHHhChHHHHHHhhcCccCCCcccCCCcEEEeeCCCCCCCe
Q 025149 82 ALVINKGDITKWSVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELREACCKVPEVRPEVRCPIGEARITPGFKLPASH 161 (257)
Q Consensus 82 ~I~I~~GDIt~~~v~~~~DaIVNaaN~~l~~~gGvs~aI~~aaG~~l~~e~~~~~~~~~~~~~~~G~v~iT~ag~L~~k~ 161 (257)
.|++++||||+... +++|+|||++|+.+.+|+||+++|++++ |++.+++++..+. .+.+++|++.+|+++ +.+|
T Consensus 5 ~i~~v~GDit~~~~-~~~daIvn~~N~~~~~G~Gva~ai~~~~-p~~~~~~~~~~~~--~~~~~~G~~~i~~~~--~~~~ 78 (158)
T 2fg1_A 5 EILYIKGDATAPIG-SGVKVITHICNDIGGWGKGFVLALSKKW-KMPEEAYRQWYKS--QEEFTLGAVQFVNVE--NKLY 78 (158)
T ss_dssp CCEEEESCTTSCCS-SSCEEEEEEEETTCCCCSTHHHHHHHHC-SHHHHHHHHHHHH--TSSCSTTCEEEEEEE--TTEE
T ss_pred EEEEEecccCCCCC-CCCeEEEEEecCCCCcCccHHHHHHHHC-ChHHHHHHHHHhh--ccCcCCccEEEEecC--CCeE
Confidence 68999999999311 1349999999999999999999999999 7777776654321 236899999999984 2499
Q ss_pred EEEEeCCc-cCCCC-C----cHHHHHHHHHHHHHHHHHcCCcEEEecccccCCCCCCHHHHHHHHHHHHH
Q 025149 162 VIHTVGPI-YDADS-N----PEASLRNAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVALSTVK 225 (257)
Q Consensus 162 IIH~V~P~-~~~~~-~----~~~~L~~~y~~~L~~A~~~~~~SIAfP~LgTG~~g~p~~~~A~~~l~ai~ 225 (257)
|||+++|. |..+. . ..+.|++||+++++.|.+++. |||||.||||++|+|++++++++.+.+.
T Consensus 79 Vi~~v~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~a~~~~~-sIa~P~Ig~G~~G~~w~~v~~ii~~~l~ 147 (158)
T 2fg1_A 79 VANMIGQHGIYKDSKGLPPIRYDAVRQCLKEVALFTIAHKA-SVHMPRIGCGLAGGKWELMEQIIKEELI 147 (158)
T ss_dssp EEEEEEESSSSCCTTCCCSBCHHHHHHHHHHHHHHHHHHTC-EEEECCTTCSTTCCCHHHHHHHHHHHTG
T ss_pred EEEEEEEcccCCCCCCCccccHHHHHHHHHHHHHHHHHhCC-eEEecCcCCCCCCCCHHHHHHHHHHHhc
Confidence 99999998 76433 1 578999999999999999997 9999999999999999999998755543
No 23
>3sig_A PArg, poly(ADP-ribose) glycohydrolase; HET: AR6; 1.28A {Thermomonospora curvata} PDB: 3sih_A 3sii_A* 3sij_A
Probab=99.09 E-value=2.5e-10 Score=102.17 Aligned_cols=92 Identities=18% Similarity=0.274 Sum_probs=78.9
Q ss_pred EEEEeCCccCCCC------CcHHHHHHHHHHHHHHHHHcCCcEEEecccccCCCCCCHHHHHHHHHHHHH---HHhcCCC
Q 025149 162 VIHTVGPIYDADS------NPEASLRNAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVALSTVK---EFANDFK 232 (257)
Q Consensus 162 IIH~V~P~~~~~~------~~~~~L~~~y~~~L~~A~~~~~~SIAfP~LgTG~~g~p~~~~A~~~l~ai~---~fl~~l~ 232 (257)
||.++.|+|..-. ...+.|+..++.+|..|.++|+++|++|++|||+||.|++++|+++.+.+. +|...++
T Consensus 172 vit~aApn~~~~~~~~~~~~~~~~l~~rir~vL~iA~~~g~~~LVLGA~GCGvfgnpp~~VA~~~~~vL~~~~~f~~~f~ 251 (277)
T 3sig_A 172 FLTSPAPNRRAIGDLRTVEEIGRVLRGRAAKVLAAARHHGHRRLVLGAWGCGVFGNDPAQVAETFAGLLLDGGPFAGRFA 251 (277)
T ss_dssp EEEECCCCHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCTTSSTTCCCHHHHHHHHHHHHSTTCTTTTTCS
T ss_pred EEEecCCCCccccCccchHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcccCcCCCCHHHHHHHHHHHHhhcchhcCCce
Confidence 6888888774211 124789999999999999999999999999999999999999999999998 4666899
Q ss_pred eEEEEecCh----HHHHHHHHHHHH
Q 025149 233 EVHFVLFSD----DIYNVWLNKAKE 253 (257)
Q Consensus 233 ~V~fv~~~~----~~~~~f~~~~~~ 253 (257)
+|+|.++++ ..+++|.++|++
T Consensus 252 ~VvFAv~d~~~~~~n~~~F~~~F~~ 276 (277)
T 3sig_A 252 HVVFAVWDTAPGAPRHAAFARRFGS 276 (277)
T ss_dssp EEEEECCCCSTTCHHHHHHHHHC--
T ss_pred EEEEEEecCCCcchHHHHHHHHHhh
Confidence 999999987 689999998875
No 24
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=49.16 E-value=1.8 Score=27.90 Aligned_cols=35 Identities=14% Similarity=0.397 Sum_probs=30.7
Q ss_pred CCCCCCcccccCCCCccceeecchhHHHHhhhccc
Q 025149 12 PATQLPQATNSSTFPKSRTSVSDNSLATRAKAKTI 46 (257)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 46 (257)
|-..||..++++.|+-.-..+|.|.|..|.+++..
T Consensus 8 p~~~lP~~VD~eVF~~LP~dIQ~Ells~~~~e~~~ 42 (48)
T 2kwv_A 8 PLQALPEGVDQEVFKQLPADIQEEILSGKSRENLK 42 (48)
T ss_dssp CTTSSCTTCCGGGTTTSCHHHHHHHTTCCCSCCCC
T ss_pred ccccCCCCCCHHHHHHCcHHHHHHHHhcchHHhhc
Confidence 56789999999999999999999999999877543
No 25
>2vg0_A Short-chain Z-isoprenyl diphosphate synthetase; peptidoglycan synthesis, cell WALL biogenesis/degradation, secreted, cell shape; HET: GPP; 1.7A {Mycobacterium tuberculosis} PDB: 2vfw_A* 2vg1_A*
Probab=48.35 E-value=26 Score=29.72 Aligned_cols=48 Identities=13% Similarity=0.115 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHcCCcEEEecccccCCCCCCHHHHHHHHHHHHHHHhc
Q 025149 181 RNAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVALSTVKEFAN 229 (257)
Q Consensus 181 ~~~y~~~L~~A~~~~~~SIAfP~LgTG~~g~p~~~~A~~~l~ai~~fl~ 229 (257)
...+++++..|.+.|++.+.+=++||+++.=|.++. ..+++-+.+++.
T Consensus 33 ~~~l~~i~~~c~~~GI~~lTlYaFSteN~kRp~~Ev-~~Lm~l~~~~l~ 80 (227)
T 2vg0_A 33 AAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDEL-AALIEIITDVVE 80 (227)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEEEETGGGGSCHHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeecccccCCCHHHH-HHHHHHHHHHHH
Confidence 457778888888999999999999999999999988 445566666654
No 26
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=48.19 E-value=46 Score=26.50 Aligned_cols=44 Identities=14% Similarity=0.184 Sum_probs=26.7
Q ss_pred CCeEEEEeCCccCCCCCcHHHHHHHHHHHHHHHHHcCCcEEEecc
Q 025149 159 ASHVIHTVGPIYDADSNPEASLRNAYKNSLSVAKENNIQYIAFTA 203 (257)
Q Consensus 159 ~k~IIH~V~P~~~~~~~~~~~L~~~y~~~L~~A~~~~~~SIAfP~ 203 (257)
++.|||++++.|.... ....-.....++++.|.+.+.+.+.+-.
T Consensus 68 ~d~vi~~a~~~~~~~~-~~~~n~~~~~~l~~~~~~~~~~~~v~~S 111 (227)
T 3dhn_A 68 ADAVISAFNPGWNNPD-IYDETIKVYLTIIDGVKKAGVNRFLMVG 111 (227)
T ss_dssp CSEEEECCCC-------CCSHHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCEEEEeCcCCCCChh-HHHHHHHHHHHHHHHHHHhCCCEEEEeC
Confidence 5799999998765432 1112234567888888888888777643
No 27
>3ugs_B Undecaprenyl pyrophosphate synthase; niaid, csgid, structural genomics, center for structural GEN infectious diseases; HET: FFT; 2.46A {Campylobacter jejuni} SCOP: c.101.1.0
Probab=34.33 E-value=48 Score=28.19 Aligned_cols=46 Identities=17% Similarity=0.247 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHcCCcEEEecccccCCCCCCHHHHHHHHHHHHHHHh
Q 025149 182 NAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVALSTVKEFA 228 (257)
Q Consensus 182 ~~y~~~L~~A~~~~~~SIAfP~LgTG~~g~p~~~~A~~~l~ai~~fl 228 (257)
..++++++.|.+.|++.+.+=++||.++.=|++++...| +-+.+++
T Consensus 37 ~~~~~i~~~c~~lGI~~lTlYaFStENw~Rp~~EV~~Lm-~L~~~~l 82 (225)
T 3ugs_B 37 KTMQKLMEVCMEENISNLSLFAFSTENWKRPKDEIDFIF-ELLDRCL 82 (225)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEEESGGGGSCHHHHHHHH-HHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEEEEcccccCCCHHHHHHHH-HHHHHHH
Confidence 466777788889999999999999999999999887653 4444444
No 28
>4h8e_A Undecaprenyl pyrophosphate synthase; alpha-helix, prenyl transferase, cell WALL biosynthesis, FAR diphosphate binding; HET: FPP; 1.30A {Staphylococcus aureus subsp}
Probab=30.30 E-value=55 Score=28.35 Aligned_cols=40 Identities=18% Similarity=0.292 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHcCCcEEEecccccCCCCCCHHHHHHHH
Q 025149 181 RNAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVA 220 (257)
Q Consensus 181 ~~~y~~~L~~A~~~~~~SIAfP~LgTG~~g~p~~~~A~~~ 220 (257)
...++++++.|.+.|++.+.+=++||.++.=|.+++...|
T Consensus 54 ~~~~~~iv~~c~~lGI~~lTlYaFStENwkRp~~EV~~Lm 93 (256)
T 4h8e_A 54 MQTIKKITRIASDIGVKYLTLYAFSTENWSRPESEVNYIM 93 (256)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEEEETTGGGSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEEchhhhCCCHHHHHHHH
Confidence 3567788888889999999999999999999999887554
No 29
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=26.19 E-value=70 Score=25.24 Aligned_cols=41 Identities=7% Similarity=0.124 Sum_probs=29.0
Q ss_pred CCeEEEEeCCccCCCCCcHHHHHHHHHHHHHHHHHcCCcEEEec
Q 025149 159 ASHVIHTVGPIYDADSNPEASLRNAYKNSLSVAKENNIQYIAFT 202 (257)
Q Consensus 159 ~k~IIH~V~P~~~~~~~~~~~L~~~y~~~L~~A~~~~~~SIAfP 202 (257)
++.|||++++.|.... ...-....+++++.|.+.+ +.+.+.
T Consensus 63 ~d~vi~~ag~~~~~~~--~~~n~~~~~~l~~a~~~~~-~~~v~~ 103 (224)
T 3h2s_A 63 VDAVVDALSVPWGSGR--GYLHLDFATHLVSLLRNSD-TLAVFI 103 (224)
T ss_dssp CSEEEECCCCCTTSSC--THHHHHHHHHHHHTCTTCC-CEEEEE
T ss_pred CCEEEECCccCCCcch--hhHHHHHHHHHHHHHHHcC-CcEEEE
Confidence 6899999998875432 2334446688888888888 666664
No 30
>3lgd_A Adenosine deaminase CECR1; TIM barrel, dimerization and receptor binding domains, glyco hydrolase, growth factor, secreted; HET: NAG; 2.00A {Homo sapiens} PDB: 3lgg_A*
Probab=23.93 E-value=4.6e+02 Score=24.68 Aligned_cols=55 Identities=13% Similarity=0.073 Sum_probs=43.0
Q ss_pred cHHHHHHHHHHHHHHHHHcCCcEEEe----c-ccccCCCCCCHHHHHHHHHHHHHHHhcC
Q 025149 176 PEASLRNAYKNSLSVAKENNIQYIAF----T-AISCGVYGYPYEEAAAVALSTVKEFAND 230 (257)
Q Consensus 176 ~~~~L~~~y~~~L~~A~~~~~~SIAf----P-~LgTG~~g~p~~~~A~~~l~ai~~fl~~ 230 (257)
.+..++..++++|+.+.+.|+.-+=+ | ...+...|++.++..+++.+++.++.+.
T Consensus 194 ~~~~~~~~~~e~l~d~a~dgV~Y~ElR~~f~p~~~~~g~~l~~~~vv~~v~~~~~~~~~~ 253 (508)
T 3lgd_A 194 YAPVFRDYVFRSMQEFYEDNVLYMEIRARLLPVYELSGEHHDEEWSVKTYQEVAQKFVET 253 (508)
T ss_dssp BHHHHHHHHHHHHHHHHHTTEEEEEEEECCCCCBCTTSCBCCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCceEEEEeecCchHhhccCCCCCHHHHHHHHHHHHHHHHHh
Confidence 45788899999999999999876643 3 3444335799999999999999998753
No 31
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=23.64 E-value=1.9e+02 Score=25.33 Aligned_cols=54 Identities=17% Similarity=0.176 Sum_probs=42.1
Q ss_pred cHHHHHHHHHHHHHHHHHcCCcEE--Ee-cccccCCCCCCHHHHHHHHHHHHHHHhcC
Q 025149 176 PEASLRNAYKNSLSVAKENNIQYI--AF-TAISCGVYGYPYEEAAAVALSTVKEFAND 230 (257)
Q Consensus 176 ~~~~L~~~y~~~L~~A~~~~~~SI--Af-P~LgTG~~g~p~~~~A~~~l~ai~~fl~~ 230 (257)
+++.++...+.+++.+.+.|+..+ -| |-..++ .|++.+...+.++++++++.+.
T Consensus 72 t~ed~~~~a~~~~~~~~~dgV~y~Eir~~P~~~~~-~gl~~~~~v~~v~~~~~~a~~~ 128 (326)
T 3pao_A 72 TEQDFYDLTWAYLQKCKAQNVVHVEPFFDPQTHTD-RGIPFEVVLAGIRAALRDGEKL 128 (326)
T ss_dssp SHHHHHHHHHHHHHHHHHTTEEEECCEECHHHHHT-TTCCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCCeEEEEEEChHHhcc-CCCCHHHHHHHHHHHHHHHHhh
Confidence 467889999999999988888765 23 555553 6789999999999999887653
No 32
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=23.16 E-value=2.7e+02 Score=22.92 Aligned_cols=62 Identities=16% Similarity=0.083 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEecccccCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEecC
Q 025149 178 ASLRNAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVALSTVKEFANDFKEVHFVLFS 240 (257)
Q Consensus 178 ~~L~~~y~~~L~~A~~~~~~SIAfP~LgTG~~g~p~~~~A~~~l~ai~~fl~~l~~V~fv~~~ 240 (257)
+.....++.+++.|.+.|.+.|..|..|. ..+.+.++.-+.+.+.+++..+..++|.+++-+
T Consensus 109 ~~~~~~~~~~i~~A~~lG~~~v~~~~~g~-~~~~~~~~~~~~~~~~l~~l~~~a~~v~l~lEn 170 (290)
T 2zvr_A 109 KKAIERVVKHTEVAGMFGALVIIGLVRGR-REGRSYEETEELFIESMKRLLELTEHAKFVIEP 170 (290)
T ss_dssp HHHHHHHHHHHHHHHHHTCEEEESGGGCC-CTTSCHHHHHHHHHHHHHHHHHHCSSCCEEECC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEecCCCC-CCCcCHHHHHHHHHHHHHHHHHHhccCEEEEEe
Confidence 45556788999999999999998554232 234566777777777777665422226666643
No 33
>3sgv_B Undecaprenyl pyrophosphate synthase; alpha/beta, transferase; HET: 2BJ; 1.61A {Escherichia coli} PDB: 1jp3_A* 1v7u_A* 1x06_A* 1x07_A* 2e98_A* 2e99_A* 2e9a_A* 2e9c_A* 2e9d_A* 1ueh_A 3sgt_B* 3qas_B* 3sgx_A* 3sh0_B* 3th8_A* 4h2j_A* 4h2m_A* 4h2o_B* 4h38_A* 4h3a_A* ...
Probab=22.97 E-value=61 Score=28.05 Aligned_cols=41 Identities=22% Similarity=0.318 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHcCCcEEEecccccCCCCCCHHHHHHHH
Q 025149 180 LRNAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVA 220 (257)
Q Consensus 180 L~~~y~~~L~~A~~~~~~SIAfP~LgTG~~g~p~~~~A~~~ 220 (257)
=...++++++.|.+.|++.+.+=++||.++.=|++++...|
T Consensus 46 G~~~l~~i~~~c~~lGI~~lTlYaFStENwkRp~~EV~~Lm 86 (253)
T 3sgv_B 46 GAKSVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSALM 86 (253)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECC-----------CHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEEEchhccCCCHHHHHHHH
Confidence 34567788888889999999999999999999998887554
No 34
>2vg3_A Undecaprenyl pyrophosphate synthetase; transferase, cell WALL biogenesis/degradation, cell cycle, P transferase; HET: GPP; 1.8A {Mycobacterium tuberculosis} PDB: 2vg2_A* 2vg4_A
Probab=22.73 E-value=90 Score=27.40 Aligned_cols=40 Identities=18% Similarity=0.119 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHcCCcEEEecccccCCCCCCHHHHHHHH
Q 025149 181 RNAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVA 220 (257)
Q Consensus 181 ~~~y~~~L~~A~~~~~~SIAfP~LgTG~~g~p~~~~A~~~ 220 (257)
...+++++..|.+.|++.+.+=++||.++.=|.++....|
T Consensus 85 ~~~l~~iv~~c~~lGI~~LTlYaFStENwkRp~~EV~~Lm 124 (284)
T 2vg3_A 85 EAVVIDIACGAIELGIKWLSLYAFSTENWKRSPEEVRFLM 124 (284)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEEEETTGGGSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeccCcccCCCHHHHHHHH
Confidence 3678888888899999999999999999999999876554
No 35
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=21.47 E-value=1e+02 Score=24.11 Aligned_cols=42 Identities=12% Similarity=0.045 Sum_probs=28.2
Q ss_pred CCeEEEEeCCccCCCCCcHHHHHHHHHHHHHHHHHcCCcEEEeccc
Q 025149 159 ASHVIHTVGPIYDADSNPEASLRNAYKNSLSVAKENNIQYIAFTAI 204 (257)
Q Consensus 159 ~k~IIH~V~P~~~~~~~~~~~L~~~y~~~L~~A~~~~~~SIAfP~L 204 (257)
++.|||++++..... ..-....+++++.|.+.+.+.+.+..=
T Consensus 62 ~d~vi~~ag~~~~~~----~~~~~~~~~l~~a~~~~~~~~~v~~SS 103 (221)
T 3ew7_A 62 QNVVVDAYGISPDEA----EKHVTSLDHLISVLNGTVSPRLLVVGG 103 (221)
T ss_dssp CSEEEECCCSSTTTT----TSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred CCEEEECCcCCcccc----chHHHHHHHHHHHHHhcCCceEEEEec
Confidence 688999998854321 123346778888888877777777543
No 36
>3dct_B Nuclear receptor coactivator 1; FXR, GW4064, alpha-helical sandwich, alternative splicing, DNA-binding, metal-binding nucleus, repressor; HET: 064; 2.50A {Homo sapiens} PDB: 3dcu_B* 3hc5_B* 3hc6_B* 3rvf_B*
Probab=21.22 E-value=30 Score=18.16 Aligned_cols=8 Identities=50% Similarity=1.111 Sum_probs=6.8
Q ss_pred HHHHHhhc
Q 025149 4 RRLIRFLL 11 (257)
Q Consensus 4 ~~~~~~~~ 11 (257)
.+|+||||
T Consensus 6 hqllryll 13 (21)
T 3dct_B 6 HQLLRYLL 13 (26)
T ss_pred HHHHHHHH
Confidence 47899998
No 37
>2d2r_A Undecaprenyl pyrophosphate synthase; prenyltransferase, transferase; 1.88A {Helicobacter pylori} PDB: 2dtn_A
Probab=20.09 E-value=74 Score=27.27 Aligned_cols=40 Identities=13% Similarity=0.160 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHcCCcEEEecccccCCCCCCHHHHHHHH
Q 025149 181 RNAYKNSLSVAKENNIQYIAFTAISCGVYGYPYEEAAAVA 220 (257)
Q Consensus 181 ~~~y~~~L~~A~~~~~~SIAfP~LgTG~~g~p~~~~A~~~ 220 (257)
...+++++..|.+.|++.+.+=++||.++.=|.+++...|
T Consensus 45 ~~~l~~iv~~c~~~GI~~lTlYaFSteNwkRp~~EV~~Lm 84 (245)
T 2d2r_A 45 VKTLKDITIWCANHKLECLTLYAFSTENWKRPKSEVDFLM 84 (245)
T ss_dssp HHHHHHHHHHHHTTTCSEEEEECC----------CHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeccCcccCCCHHHHHHHH
Confidence 4678888888999999999999999999999987766553
Done!