BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 025153
         (257 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9Y7U3|GEP4_SCHPO Probable phosphatidylglycerophosphatase, mitochondrial
           OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
           GN=gep4 PE=3 SV=2
          Length = 209

 Score = 36.6 bits (83), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 10/97 (10%)

Query: 142 INVEGIVSSTVVFAKDRHLALPHVTVP-------DIRYIDWAELQRR-GFKGVVFDKDNT 193
           IN+EGI +        R + +PH T P       +I Y    + Q     + +V DKDN 
Sbjct: 3   INIEGIQAFCQTIRNPRRI-IPHATFPTFSQIPCNINYFLEQKFQVPVDIRALVLDKDNC 61

Query: 194 LTAPYSLTLWGPLSSSIEQCKSVFGH-DIAVFSNSAG 229
           +T P   T+       I + ++++G  ++ + SNS G
Sbjct: 62  ITLPNETTIAEAELKKIREFQNIYGEKNVILLSNSIG 98


>sp|Q96AY3|FKB10_HUMAN Peptidyl-prolyl cis-trans isomerase FKBP10 OS=Homo sapiens
           GN=FKBP10 PE=1 SV=1
          Length = 582

 Score = 32.0 bits (71), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 9/69 (13%)

Query: 58  PTANSFSKEQEENLRKDNKLHPDQNHTFLDQFYSSADTNKLGNQDPES------QNQEQD 111
           P AN F   ++ +L KD ++ P++  TF+    S      +  QDPE       QNQ+++
Sbjct: 501 PPANLF---EDMDLNKDGEVPPEEFSTFIKAQVSEGKGRLMPGQDPEKTIGDMFQNQDRN 557

Query: 112 EEPRYNKDK 120
           ++ +   D+
Sbjct: 558 QDGKITVDE 566


>sp|Q9UT05|TPP2_SCHPO Tripeptidyl-peptidase 2 homolog OS=Schizosaccharomyces pombe
           (strain 972 / ATCC 24843) GN=tpp2 PE=1 SV=1
          Length = 1274

 Score = 31.2 bits (69), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 8/90 (8%)

Query: 119 DKYWTVLCTNMWWSQLK-AALGQRINVEGIVSSTVVFAKDRHLALPHVTVPDIRYIDWAE 177
           D Y   LC   WWS L+   L   +N  GI    VV  K+ +L    ++   ++ +D A 
Sbjct: 786 DSYTLELCMAQWWSSLEPMVLDIDVNFHGI---KVVNGKEINL----ISSQGLKRVDCAS 838

Query: 178 LQRRGFKGVVFDKDNTLTAPYSLTLWGPLS 207
           ++R  FK  +  KD   +   + T+  PL 
Sbjct: 839 IRRENFKPDITLKDYVDSFKPTNTVIKPLG 868


>sp|Q3B756|FUZZY_RAT Protein fuzzy homolog OS=Rattus norvegicus GN=Fuz PE=2 SV=2
          Length = 415

 Score = 30.8 bits (68), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 15/59 (25%), Positives = 22/59 (37%)

Query: 73  KDNKLHPDQNHTFLDQFYSSADTNKLGNQDPESQNQEQDEEPRYNKDKYWTVLCTNMWW 131
           KD +  P+Q    L  FY+   T     +   ++ QE    P       + VL   M W
Sbjct: 317 KDKEPSPEQRRRLLRNFYTLVATTHFPPEPGPAEKQEDTVHPAQTPRACYLVLGPGMGW 375


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.320    0.133    0.423 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,460,305
Number of Sequences: 539616
Number of extensions: 3888031
Number of successful extensions: 10661
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 10635
Number of HSP's gapped (non-prelim): 37
length of query: 257
length of database: 191,569,459
effective HSP length: 115
effective length of query: 142
effective length of database: 129,513,619
effective search space: 18390933898
effective search space used: 18390933898
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)