Your job contains 1 sequence.
>025154
MATLGCQFHCRMHHISQNVKAKRFISCSTNPPQSNIKVIINGAVKEIGRAAVIAVTKARG
MEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVY
DNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISAS
FHYKNVEIVESRPNARVRYMTRTLISMQVCLRHIYLYPKFQNNNSFHTKRKLKIASSIIG
VGEILILSKILPSAQKN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 025154
(257 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2173043 - symbol:CRR1 "chlororespiration reduc... 717 7.7e-71 1
TIGR_CMR|CHY_1151 - symbol:CHY_1151 "dihydrodipicolinate ... 155 2.0e-09 1
TIGR_CMR|CBU_1709 - symbol:CBU_1709 "dihydrodipicolinate ... 143 3.1e-09 2
TIGR_CMR|BA_1555 - symbol:BA_1555 "dihydrodipicolinate re... 144 5.2e-08 1
UNIPROTKB|P63895 - symbol:dapB "4-hydroxy-tetrahydrodipic... 140 1.4e-07 1
TIGR_CMR|DET_0971 - symbol:DET_0971 "dihydrodipicolinate ... 130 2.6e-06 1
>TAIR|locus:2173043 [details] [associations]
symbol:CRR1 "chlororespiration reduction 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008839 "4-hydroxy-tetrahydrodipicolinate
reductase" evidence=IEA;IGI;ISS] [GO:0009089 "lysine biosynthetic
process via diaminopimelate" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0070402 "NADPH binding" evidence=IEA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0019684
"photosynthesis, light reaction" evidence=IMP] [GO:0009773
"photosynthetic electron transport in photosystem I" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0010103
"stomatal complex morphogenesis" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0016556 "mRNA
modification" evidence=RCA] [GO:0030154 "cell differentiation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR000846 InterPro:IPR011770
InterPro:IPR022663 InterPro:IPR023940 Pfam:PF01113 Pfam:PF05173
PIRSF:PIRSF000161 UniPathway:UPA00034 InterPro:IPR016040
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009570
Gene3D:3.40.50.720 GO:GO:0016491 GO:GO:0070402 GO:GO:0009089
GO:GO:0019877 EMBL:AB015478 eggNOG:COG0289 KO:K00215
PANTHER:PTHR20836 EMBL:AY084406 EMBL:BT030092 IPI:IPI00522022
RefSeq:NP_200023.1 UniGene:At.29638 HSSP:P72024
ProteinModelPortal:Q9FJ82 SMR:Q9FJ82 STRING:Q9FJ82 PaxDb:Q9FJ82
PRIDE:Q9FJ82 EnsemblPlants:AT5G52100.1 GeneID:835286
KEGG:ath:AT5G52100 TAIR:At5g52100 HOGENOM:HOG000227154
InParanoid:Q9FJ82 OMA:IHVHAVR PhylomeDB:Q9FJ82
ProtClustDB:CLSN2687455 Genevestigator:Q9FJ82 GO:GO:0019684
TIGRFAMs:TIGR00036 Uniprot:Q9FJ82
Length = 298
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 143/189 (75%), Positives = 164/189 (86%)
Query: 9 HCRMHHISQNVKAKR-FISCSTNPP-QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGA 66
+C +S+++K R SCS + P Q+NIKVIINGA KEIGRAAV+AVTKARGME+AGA
Sbjct: 5 NCHFFQLSRHLKPSRPSFSCSASQPSQNNIKVIINGAAKEIGRAAVVAVTKARGMELAGA 64
Query: 67 IDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQA 126
+D+H VGEDIG++CDME+PLEIPV+SDLTMVLGSISQ K VVIDFTD STVY+NVKQA
Sbjct: 65 VDNHFVGEDIGLLCDMEEPLEIPVVSDLTMVLGSISQGKEVGVVIDFTDPSTVYENVKQA 124
Query: 127 TAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNV 186
TAFGM+SVVYVP I+ ETVSALSA CDKA+MGCL+APTLSIGSILLQQA I ASFHY NV
Sbjct: 125 TAFGMKSVVYVPRIKPETVSALSALCDKATMGCLVAPTLSIGSILLQQAVIMASFHYNNV 184
Query: 187 EIVESRPNA 195
E+VESRPNA
Sbjct: 185 ELVESRPNA 193
>TIGR_CMR|CHY_1151 [details] [associations]
symbol:CHY_1151 "dihydrodipicolinate reductase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008839 "4-hydroxy-tetrahydrodipicolinate reductase"
evidence=ISS] [GO:0009089 "lysine biosynthetic process via
diaminopimelate" evidence=ISS] HAMAP:MF_00102 InterPro:IPR000846
InterPro:IPR011770 InterPro:IPR022663 InterPro:IPR022664
InterPro:IPR023940 Pfam:PF01113 Pfam:PF05173 PIRSF:PIRSF000161
PROSITE:PS01298 UniPathway:UPA00034 InterPro:IPR016040
GO:GO:0005737 Gene3D:3.40.50.720 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0070402 GO:GO:0009089 GO:GO:0019877
eggNOG:COG0289 KO:K00215 GO:GO:0008839 PANTHER:PTHR20836
HOGENOM:HOG000227154 TIGRFAMs:TIGR00036 RefSeq:YP_359996.1
ProteinModelPortal:Q3ACY8 STRING:Q3ACY8 GeneID:3727402
KEGG:chy:CHY_1151 PATRIC:21275442 OMA:RLHSVRL
BioCyc:CHYD246194:GJCN-1150-MONOMER Uniprot:Q3ACY8
Length = 263
Score = 155 (59.6 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 47/178 (26%), Positives = 86/178 (48%)
Query: 37 KVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTM 96
++++ GA ++GR + E+ G +D +VG+D G + + + L V +L
Sbjct: 3 RIVMLGACGKMGREISKNLLMHSEHELVGFVDVVNVGQDFGEILGISR-LGKTVEDNLKE 61
Query: 97 VLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKAS 156
V+ + +V+DF+ AS + N+ A +R V E + + + +
Sbjct: 62 VILKTNPE----IVLDFSRASGAFTNILIALENKVRVVSGTTGFSQEQIKKIEDVSNANN 117
Query: 157 MGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARVRYMTRTLISMQVCLRHI 214
+GC+IAP SIG++LL + A A+ ++ +VEI+E N +V + T I L I
Sbjct: 118 LGCIIAPNFSIGALLLMKLAQMAAKYFSHVEIIEYHHNLKVDAPSGTAIKTAELLSSI 175
>TIGR_CMR|CBU_1709 [details] [associations]
symbol:CBU_1709 "dihydrodipicolinate reductase"
species:227377 "Coxiella burnetii RSA 493" [GO:0008839
"4-hydroxy-tetrahydrodipicolinate reductase" evidence=ISS]
[GO:0009089 "lysine biosynthetic process via diaminopimelate"
evidence=ISS] HAMAP:MF_00102 InterPro:IPR000846 InterPro:IPR011770
InterPro:IPR022663 InterPro:IPR022664 InterPro:IPR023940
Pfam:PF01113 Pfam:PF05173 PIRSF:PIRSF000161 PROSITE:PS01298
UniPathway:UPA00034 InterPro:IPR016040 GO:GO:0005737
Gene3D:3.40.50.720 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0070402 GO:GO:0009089 GO:GO:0019877 eggNOG:COG0289 KO:K00215
GO:GO:0008839 PANTHER:PTHR20836 HOGENOM:HOG000227154 OMA:IHVHAVR
TIGRFAMs:TIGR00036 ProtClustDB:PRK00048 EMBL:M74242 PIR:B44791
RefSeq:NP_820690.1 ProteinModelPortal:P24703 PRIDE:P24703
GeneID:1209620 KEGG:cbu:CBU_1709 PATRIC:17932153
BioCyc:CBUR227377:GJ7S-1681-MONOMER Uniprot:P24703
Length = 239
Score = 143 (55.4 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 37/126 (29%), Positives = 64/126 (50%)
Query: 88 IPVMSDLTMVLGSISQSK-ARA-------VVIDFTDASTVYDNVKQATAFGMRSVVYVPH 139
I SDL +V G+ Q A+ VVIDFT +V+ N + G R V+
Sbjct: 22 ITAQSDLELVSGTGRQDDLAKTIQTTHADVVIDFTTPQSVFHNAEIIIQSGARPVIGTTG 81
Query: 140 IQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARVRY 199
+ LE ++ L C +G ++AP S+G++L+ + A A+ ++ +VEI+E + ++
Sbjct: 82 LTLEQIALLDKQCRNKKLGAIVAPNFSVGAVLMMKYAKEAAHYFPDVEIIEMHHSQKIDA 141
Query: 200 MTRTLI 205
+ T I
Sbjct: 142 PSGTAI 147
Score = 41 (19.5 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGME-VAG 65
I VIING ++GR +T +E V+G
Sbjct: 3 INVIINGINGKMGRVVKENITAQSDLELVSG 33
>TIGR_CMR|BA_1555 [details] [associations]
symbol:BA_1555 "dihydrodipicolinate reductase"
species:198094 "Bacillus anthracis str. Ames" [GO:0008839
"4-hydroxy-tetrahydrodipicolinate reductase" evidence=ISS]
[GO:0009089 "lysine biosynthetic process via diaminopimelate"
evidence=ISS] HAMAP:MF_00102 InterPro:IPR000846 InterPro:IPR011770
InterPro:IPR022663 InterPro:IPR022664 InterPro:IPR023940
Pfam:PF01113 Pfam:PF05173 PIRSF:PIRSF000161 PROSITE:PS01298
UniPathway:UPA00034 InterPro:IPR016040 GO:GO:0005737
Gene3D:3.40.50.720 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0070402 GO:GO:0009089 GO:GO:0019877
eggNOG:COG0289 KO:K00215 GO:GO:0008839 PANTHER:PTHR20836
HOGENOM:HOG000227154 TIGRFAMs:TIGR00036 RefSeq:NP_844005.1
RefSeq:YP_018177.1 RefSeq:YP_027711.1 ProteinModelPortal:Q81SU0
DNASU:1086847 EnsemblBacteria:EBBACT00000009988
EnsemblBacteria:EBBACT00000018736 EnsemblBacteria:EBBACT00000020843
GeneID:1086847 GeneID:2815987 GeneID:2851184 KEGG:ban:BA_1555
KEGG:bar:GBAA_1555 KEGG:bat:BAS1442 OMA:IVMAPNM
ProtClustDB:PRK00048 BioCyc:BANT260799:GJAJ-1516-MONOMER
BioCyc:BANT261594:GJ7F-1579-MONOMER Uniprot:Q81SU0
Length = 266
Score = 144 (55.7 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 40/155 (25%), Positives = 76/155 (49%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLT 95
+KVII G +G AV+ + + + A+D GE I + M L+ + +DL
Sbjct: 4 MKVIIAGPRGRMGHEAVLLMERTEHFNLVAAVDYKHGGEKISDLPGMPA-LDATIYADLH 62
Query: 96 MVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKA 155
L + V++D T +V A G+RSV+ E + L+ +
Sbjct: 63 TCLEEVEAD----VLLDLTTPEVGKQHVTLAVERGLRSVIGTTGFTEEELKQLTETAKEK 118
Query: 156 SMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE 190
++G +IAP +IG++L+ + + A+ ++++VE++E
Sbjct: 119 AVGTIIAPNFAIGAVLMMKFSQMAAKYFQDVEVIE 153
>UNIPROTKB|P63895 [details] [associations]
symbol:dapB "4-hydroxy-tetrahydrodipicolinate reductase"
species:170187 "Streptococcus pneumoniae TIGR4" [GO:0005515
"protein binding" evidence=IPI] HAMAP:MF_00102 InterPro:IPR000846
InterPro:IPR011770 InterPro:IPR022663 InterPro:IPR022664
InterPro:IPR023940 Pfam:PF01113 Pfam:PF05173 PIRSF:PIRSF000161
PROSITE:PS01298 UniPathway:UPA00034 InterPro:IPR016040
GO:GO:0005737 Gene3D:3.40.50.720 EMBL:AE005672
GenomeReviews:AE005672_GR GO:GO:0070402 GO:GO:0009089 GO:GO:0019877
eggNOG:COG0289 KO:K00215 GO:GO:0008839 PANTHER:PTHR20836
HOGENOM:HOG000227154 TIGRFAMs:TIGR00036 OMA:IVMAPNM
ProtClustDB:PRK00048 PIR:A95181 RefSeq:NP_346002.1
ProteinModelPortal:P63895 EnsemblBacteria:EBSTRT00000026496
GeneID:931285 KEGG:spn:SP_1555 PATRIC:19707539 Uniprot:P63895
Length = 255
Score = 140 (54.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 47/157 (29%), Positives = 73/157 (46%)
Query: 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS-HSVGEDIGMVCDMEQPLEIPVMSD 93
+I+VII G ++G+AA V +++ +D S E G IPV D
Sbjct: 2 SIRVIIAGFKGKMGQAACQMVLTDPDLDLVAVLDPFESESEWQG----------IPVFKD 51
Query: 94 LTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCD 153
+ G + V +DFT + Y+N + A G VV E ++ L F
Sbjct: 52 KADLAGFEAD-----VWVDFTTPAVAYENTRFALENGFAPVVGTTGFTSEEIAELKEFSR 106
Query: 154 KASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE 190
+G LIAP ++G++LL Q A A+ ++ NVEI+E
Sbjct: 107 AQDLGGLIAPNFALGAVLLMQFATQAAKYFPNVEIIE 143
>TIGR_CMR|DET_0971 [details] [associations]
symbol:DET_0971 "dihydrodipicolinate reductase"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0008839
"4-hydroxy-tetrahydrodipicolinate reductase" evidence=ISS]
[GO:0009089 "lysine biosynthetic process via diaminopimelate"
evidence=ISS] HAMAP:MF_00102 InterPro:IPR000846 InterPro:IPR011770
InterPro:IPR022663 InterPro:IPR022664 InterPro:IPR023940
Pfam:PF01113 Pfam:PF05173 PIRSF:PIRSF000161 PROSITE:PS01298
UniPathway:UPA00034 InterPro:IPR016040 GO:GO:0005737
Gene3D:3.40.50.720 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0070402 GO:GO:0009089 GO:GO:0019877 eggNOG:COG0289 KO:K00215
GO:GO:0008839 PANTHER:PTHR20836 HOGENOM:HOG000227154
TIGRFAMs:TIGR00036 ProtClustDB:PRK00048 OMA:RLHSVRL
RefSeq:YP_181694.1 ProteinModelPortal:Q3Z7V5 STRING:Q3Z7V5
GeneID:3229677 KEGG:det:DET0971 PATRIC:21608991
BioCyc:DETH243164:GJNF-972-MONOMER Uniprot:Q3Z7V5
Length = 263
Score = 130 (50.8 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 38/155 (24%), Positives = 75/155 (48%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLT 95
IKV+++GA ++G+ + + + + GA+D + + + + IP +DL+
Sbjct: 4 IKVVVHGASGKMGQEVLKTLCQENNLLPVGAVDIRAKSPALPLP---DGSGSIPYSADLS 60
Query: 96 MVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKA 155
VL SQ+K V++DFT A ++ A A + V+ E +S +
Sbjct: 61 SVL---SQTKPD-VMVDFTIAKASMPAIRIAAAHKVNLVIGTTGFSPEEISEIEQLAKTN 116
Query: 156 SMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE 190
+G ++AP ++G+I++ A AS + E++E
Sbjct: 117 DIGIIVAPNFALGAIIMVHLAQEASRFLASAEVIE 151
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.132 0.375 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 257 257 0.00086 114 3 11 22 0.40 33
32 0.48 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 575 (61 KB)
Total size of DFA: 163 KB (2097 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.79u 0.09s 19.88t Elapsed: 00:00:01
Total cpu time: 19.79u 0.09s 19.88t Elapsed: 00:00:01
Start: Thu May 9 18:25:08 2013 End: Thu May 9 18:25:09 2013