BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025154
(257 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FJ82|DAPB3_ARATH Putative 4-hydroxy-tetrahydrodipicolinate reductase 3,
chloroplastic OS=Arabidopsis thaliana GN=DAPB3 PE=2 SV=1
Length = 298
Score = 291 bits (745), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 146/197 (74%), Positives = 167/197 (84%), Gaps = 6/197 (3%)
Query: 1 MATLGCQFHCRMHHISQNVKAKR-FISCS-TNPPQSNIKVIINGAVKEIGRAAVIAVTKA 58
MA + C F +S+++K R SCS + P Q+NIKVIINGA KEIGRAAV+AVTKA
Sbjct: 1 MAAVNCHFF----QLSRHLKPSRPSFSCSASQPSQNNIKVIINGAAKEIGRAAVVAVTKA 56
Query: 59 RGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDAST 118
RGME+AGA+D+H VGEDIG++CDME+PLEIPV+SDLTMVLGSISQ K VVIDFTD ST
Sbjct: 57 RGMELAGAVDNHFVGEDIGLLCDMEEPLEIPVVSDLTMVLGSISQGKEVGVVIDFTDPST 116
Query: 119 VYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAIS 178
VY+NVKQATAFGM+SVVYVP I+ ETVSALSA CDKA+MGCL+APTLSIGSILLQQA I
Sbjct: 117 VYENVKQATAFGMKSVVYVPRIKPETVSALSALCDKATMGCLVAPTLSIGSILLQQAVIM 176
Query: 179 ASFHYKNVEIVESRPNA 195
ASFHY NVE+VESRPNA
Sbjct: 177 ASFHYNNVELVESRPNA 193
>sp|P72642|DAPB_SYNY3 4-hydroxy-tetrahydrodipicolinate reductase OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=dapB PE=3 SV=1
Length = 275
Score = 138 bits (348), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/223 (37%), Positives = 126/223 (56%), Gaps = 6/223 (2%)
Query: 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSV--GEDIGMVCDMEQPLEIPV 90
Q I V++NGA ++GR + AV +A +++ GA+D + G+DIG V + PLE+PV
Sbjct: 4 QDLIPVVVNGAAGKMGREVIKAVAQAPDLQLVGAVDHNPSLQGQDIGEVVGIA-PLEVPV 62
Query: 91 MSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSA 150
++DL VL +Q K + V++DFT S VYDNV+ A A+G+R VV + + + L
Sbjct: 63 LADLQSVLVLATQEKIQGVMVDFTHPSGVYDNVRSAIAYGVRPVVGTTGLSEQQIQDLGD 122
Query: 151 FCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARVRYMTRTLISMQVC 210
F +KAS GCLIAP +IG +L+QQAA+ A ++ +VEI+E N + + T I
Sbjct: 123 FAEKASTGCLIAPNFAIGVLLMQQAAVQACQYFDHVEIIELHHNQKADAPSGTAIKTAQM 182
Query: 211 LRHIYLYPKFQNNNSFHTKRKLKIASSIIGVGEILILSKILPS 253
L + K N + K + A +G G+I I S LP
Sbjct: 183 LAEMG---KTFNPPAVEEKETIAGAKGGLGPGQIPIHSIRLPG 222
>sp|B8HRK9|DAPB_CYAP4 4-hydroxy-tetrahydrodipicolinate reductase OS=Cyanothece sp.
(strain PCC 7425 / ATCC 29141) GN=dapB PE=3 SV=1
Length = 275
Score = 138 bits (347), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 107/166 (64%), Gaps = 3/166 (1%)
Query: 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSV--GEDIGMVCDMEQPLEIPV 90
Q I VI+NGA ++GR V AV +A + + GA+D + G+DIG V + PLE+P+
Sbjct: 4 QGAIPVIVNGAAGKMGREVVKAVAQAADLTLFGAVDRNPSLQGQDIGEVVGI-GPLEVPL 62
Query: 91 MSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSA 150
++DL +L + +Q V++DFT ++VYDNV+ A A+G+R VV + E + L+
Sbjct: 63 LADLQSLLVAAAQEPQAGVMVDFTHPNSVYDNVRMAIAYGVRPVVGTTGLSPEQIRDLAT 122
Query: 151 FCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR 196
F DKASMGCLI P SIG +LLQQAAI AS ++ +VEI+E N +
Sbjct: 123 FADKASMGCLIIPNFSIGMVLLQQAAIQASQYFDHVEIIELHHNQK 168
>sp|B2J0A9|DAPB_NOSP7 4-hydroxy-tetrahydrodipicolinate reductase OS=Nostoc punctiforme
(strain ATCC 29133 / PCC 73102) GN=dapB PE=3 SV=1
Length = 278
Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 110/178 (61%), Gaps = 6/178 (3%)
Query: 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSV---GEDIGMVCDMEQPLEIP 89
Q+ I VI+NGA ++GR + AV +A + + GAID HS+ +D G + + +PLE+P
Sbjct: 4 QAPIPVIVNGAAGKMGREVIKAVAQAPDLNLVGAID-HSLEHQDKDAGELAGLSEPLEVP 62
Query: 90 VMSDLTMVLGSISQSK--ARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSA 147
+ + L +LG ++ + V++DFT +VYDN++ A A+G+R VV + E +
Sbjct: 63 ITNQLEPMLGYVAGDRQSPPGVIVDFTHPDSVYDNIRSAIAYGIRPVVGTTGLSPEQIQD 122
Query: 148 LSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARVRYMTRTLI 205
L+ F DKAS GCLI P SIG +LLQQAAI+AS ++ +VEI+E N + + T I
Sbjct: 123 LADFADKASTGCLIIPNFSIGMVLLQQAAIAASKYFDHVEIIELHHNQKADAPSGTAI 180
>sp|Q8YU19|DAPB_NOSS1 4-hydroxy-tetrahydrodipicolinate reductase OS=Nostoc sp. (strain
PCC 7120 / UTEX 2576) GN=dapB PE=3 SV=1
Length = 278
Score = 132 bits (332), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 108/177 (61%), Gaps = 4/177 (2%)
Query: 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS--HSVGEDIGMVCDMEQPLEIPV 90
Q+ I VI+NGA ++GR V AV +A + + GAIDS G+D G + + +PLE+P+
Sbjct: 4 QAPIPVIVNGAAGKMGREVVKAVAQAPDLNLLGAIDSSPEHQGKDAGELAGLSEPLEVPI 63
Query: 91 MSDLTMVLGSISQSK--ARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSAL 148
+ L +LG ++ + V++DFT +VYDNV+ A A+G+R VV + + L
Sbjct: 64 TNQLEPMLGYVAGERQGPPGVIVDFTHPDSVYDNVRSAIAYGIRPVVGTTGLSPAQIQNL 123
Query: 149 SAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARVRYMTRTLI 205
+ F +KAS GCLI P SIG +LLQQAA++AS ++ +VEI+E N + + T I
Sbjct: 124 ADFAEKASTGCLIIPNFSIGMVLLQQAAVTASQYFDHVEIIELHHNQKADAPSGTAI 180
>sp|B7KBV6|DAPB_CYAP7 4-hydroxy-tetrahydrodipicolinate reductase OS=Cyanothece sp.
(strain PCC 7424) GN=dapB PE=3 SV=1
Length = 275
Score = 132 bits (332), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 106/175 (60%), Gaps = 3/175 (1%)
Query: 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSV--GEDIGMVCDMEQPLEIPV 90
+S I V++NGA ++G+ + AV++A M + GA+D + GED G V P+E+P+
Sbjct: 4 ESPIPVVVNGAAGKMGKEVIKAVSQAEDMMLVGAVDLNPKYRGEDAGEVAGC-GPVEVPI 62
Query: 91 MSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSA 150
+ DL VL +Q K + V++DFT VYDN++ A A+G+R VV + E + L
Sbjct: 63 LDDLQSVLVLATQEKVQGVMVDFTHPDGVYDNIRSAIAYGVRPVVGTTGLSGEQIKDLGE 122
Query: 151 FCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARVRYMTRTLI 205
F +KAS GCLI P SIG ILLQQAA+ AS ++ +VEI+E N + + T I
Sbjct: 123 FAEKASTGCLIVPNFSIGMILLQQAAVQASQYFDHVEIIELHHNQKADAPSGTAI 177
>sp|Q3MFY8|DAPB_ANAVT 4-hydroxy-tetrahydrodipicolinate reductase OS=Anabaena variabilis
(strain ATCC 29413 / PCC 7937) GN=dapB PE=3 SV=1
Length = 278
Score = 131 bits (330), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 108/177 (61%), Gaps = 4/177 (2%)
Query: 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS--HSVGEDIGMVCDMEQPLEIPV 90
Q+ I VI+NGA ++GR V A+ +A + + GAIDS G+D G + + +PLE+P+
Sbjct: 4 QAPIPVIVNGAAGKMGREVVKAIAQAPDLNLLGAIDSSPEHQGKDAGELAGLSEPLEVPI 63
Query: 91 MSDLTMVLGSISQSK--ARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSAL 148
+ L +LG ++ + V++DFT +VYDNV+ A A+G+R VV + + L
Sbjct: 64 TNQLEPMLGYVAGERQGPPGVIVDFTHPDSVYDNVRSAIAYGIRPVVGTTGLSPAQIQNL 123
Query: 149 SAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARVRYMTRTLI 205
+ F +KAS GCLI P SIG +LLQQAA++AS ++ +VEI+E N + + T I
Sbjct: 124 ADFAEKASTGCLIIPNFSIGMVLLQQAAVTASQYFDHVEIIELHHNQKADAPSGTAI 180
>sp|Q9S3W8|DAPB_MASLA 4-hydroxy-tetrahydrodipicolinate reductase OS=Mastigocladus
laminosus GN=dapB PE=3 SV=1
Length = 278
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 106/177 (59%), Gaps = 4/177 (2%)
Query: 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSV--GEDIGMVCDMEQPLEIPV 90
Q+ I VI+NGA ++GR + AV +A M + GA+D++ G+D G V + +P E+P+
Sbjct: 4 QTPIPVIVNGAAGKMGRETIKAVVQAADMTLMGAVDTNPEYQGKDAGEVAGLNEPTEVPI 63
Query: 91 MSDLTMVLGSISQSK--ARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSAL 148
L +L ++ + V++DFT VYDNV+ A A+G+R VV + + + L
Sbjct: 64 TDQLEPILAYVAGERHLQPGVMVDFTHPDAVYDNVRSAIAYGIRPVVGTTGLSSKQIEQL 123
Query: 149 SAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARVRYMTRTLI 205
+ F +KAS GCLI P SIG +LLQQAAI+AS ++ +VEI+E N + + T I
Sbjct: 124 ADFAEKASTGCLIIPNFSIGMVLLQQAAIAASQYFDHVEIIELHHNQKADAPSGTAI 180
>sp|Q10YI1|DAPB_TRIEI 4-hydroxy-tetrahydrodipicolinate reductase OS=Trichodesmium
erythraeum (strain IMS101) GN=dapB PE=3 SV=1
Length = 275
Score = 128 bits (322), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 113/203 (55%), Gaps = 6/203 (2%)
Query: 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS--VGEDIGMVCDMEQPLEIPV 90
Q++ VI+ GA ++GR + V A M + GAI+ +G+DIG + PLE+P+
Sbjct: 4 QTSTPVIVCGAAGKMGREVIKTVANASDMTLLGAIECQPEYIGQDIGELIG-SGPLEVPI 62
Query: 91 MSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSA 150
++DL +L +Q K AV++DFT +VY+NV+ A A+G+R VV + E + L+
Sbjct: 63 LNDLQGILVMAAQEKQPAVMVDFTHPDSVYENVRSAIAYGVRPVVGTTGLSQEQIQDLAE 122
Query: 151 FCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARVRYMTRTLISMQVC 210
F +KAS+G LI P SIG +LLQQAAI+AS H+ +VEI+E N + + T I
Sbjct: 123 FAEKASIGTLIIPNFSIGMVLLQQAAIAASKHFDHVEIIELHHNQKADAPSGTAIKTAQM 182
Query: 211 LRHI---YLYPKFQNNNSFHTKR 230
L + Y P + R
Sbjct: 183 LSELGKTYNVPNVEETEKIEGAR 205
>sp|B7JW41|DAPB_CYAP8 4-hydroxy-tetrahydrodipicolinate reductase OS=Cyanothece sp.
(strain PCC 8801) GN=dapB PE=3 SV=1
Length = 275
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 106/174 (60%), Gaps = 3/174 (1%)
Query: 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS--VGEDIGMVCDMEQPLEIPVM 91
S I V++NGA ++GR V AV +A M + GA+D + G+D+G V LE+P++
Sbjct: 5 SLIPVVVNGAAGKMGREVVKAVAQAEDMMLVGAVDYNPNYRGQDVGEVAGC-GALEVPIV 63
Query: 92 SDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAF 151
DL +L +Q K + V++DFT +VY+NV+ A A+G+R VV + E + L+ F
Sbjct: 64 DDLQSILVLATQEKIQGVMVDFTHPDSVYENVRSAIAYGVRPVVGTTGLTEEQLKDLADF 123
Query: 152 CDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARVRYMTRTLI 205
DKAS GCL+ P SIG +LLQQAA+ AS ++ +VEI+E N + + T I
Sbjct: 124 ADKASTGCLVIPNFSIGMVLLQQAAVQASQYFDHVEIIELHHNQKADAPSGTAI 177
>sp|Q5N0M4|DAPB_SYNP6 4-hydroxy-tetrahydrodipicolinate reductase OS=Synechococcus sp.
(strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=dapB
PE=3 SV=1
Length = 273
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 117/220 (53%), Gaps = 6/220 (2%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAI--DSHSVGEDIGMVCDMEQPLEIPVMSD 93
I V++NGA ++GR + A+ A + + GAI + G+DIG + + PLE+PV +D
Sbjct: 5 IPVVVNGATGKMGRETIKAIAAADDVTLVGAIARSADVQGQDIGEIVGL-GPLEVPVTND 63
Query: 94 LTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCD 153
L +L SQ + VV+DFT +YDNV++A A+G+R VV + E + L+ F +
Sbjct: 64 LEGMLCLASQEREVPVVVDFTHPDCIYDNVRKAIAYGVRPVVGTTGLNNEQLQELAEFAE 123
Query: 154 KASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARVRYMTRTLISMQVCLRH 213
KAS+GCL+ P SIG +LL QAAI AS Y +VEI+E + + + T I L
Sbjct: 124 KASVGCLVIPNFSIGMVLLMQAAIQASRFYDHVEILELHHDQKADAPSGTAIKTAQMLAE 183
Query: 214 IYLYPKFQNNNSFHTKRKLKIASSIIGVGEILILSKILPS 253
+ K N K + A +G I I S LP
Sbjct: 184 LG---KTFNPPKVTEKETMPGARGAVGPENIRIHSVRLPG 220
>sp|Q31LA3|DAPB_SYNE7 4-hydroxy-tetrahydrodipicolinate reductase OS=Synechococcus
elongatus (strain PCC 7942) GN=dapB PE=3 SV=1
Length = 273
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 98/157 (62%), Gaps = 3/157 (1%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAI--DSHSVGEDIGMVCDMEQPLEIPVMSD 93
I V++NGA ++GR + A+ A + + GAI + G+DIG + + PLE+PV +D
Sbjct: 5 IPVVVNGATGKMGRETIKAIAAADDVTLVGAIARSADVQGQDIGEIVGL-GPLEVPVTND 63
Query: 94 LTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCD 153
L +L SQ + VV+DFT +YDNV++A A+G+R VV + E + L+ F +
Sbjct: 64 LEGMLCLASQEREVPVVVDFTHPDCIYDNVRKAIAYGVRPVVGTTGLNNEQLQELAEFAE 123
Query: 154 KASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE 190
KAS+GCL+ P SIG +LL QAAI AS Y +VEI+E
Sbjct: 124 KASVGCLVIPNFSIGMVLLMQAAIQASRFYDHVEILE 160
>sp|Q8DHH2|DAPB_THEEB 4-hydroxy-tetrahydrodipicolinate reductase OS=Thermosynechococcus
elongatus (strain BP-1) GN=dapB PE=3 SV=1
Length = 276
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 98/170 (57%), Gaps = 5/170 (2%)
Query: 27 CSTNPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPL 86
C + P I VI+ GA+ ++GR V AV +A + A+D VGEDIG + L
Sbjct: 5 CMSTP----ISVIVVGALGKMGREVVKAVHQAPDTALYAAVDRKQVGEDIGEALGLGT-L 59
Query: 87 EIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVS 146
EIP+ L V + +Q K V++DFT VY+NV+ A A+G+ VV + E +
Sbjct: 60 EIPISGSLQEVCVAAAQEKQPVVMVDFTHPQAVYENVRMAIAYGVYPVVGTTGLSPEQIE 119
Query: 147 ALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR 196
L+ F DKA MG +IAP SIG +LLQ+AAI AS ++ +VEI+E N +
Sbjct: 120 ELAEFADKADMGAVIAPNFSIGMVLLQEAAIRASQYFDHVEIIELHHNQK 169
>sp|B1XIL4|DAPB_SYNP2 4-hydroxy-tetrahydrodipicolinate reductase OS=Synechococcus sp.
(strain ATCC 27264 / PCC 7002 / PR-6) GN=dapB PE=3 SV=1
Length = 275
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 103/174 (59%), Gaps = 3/174 (1%)
Query: 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS--VGEDIGMVCDMEQPLEIPVM 91
+ I V+INGA ++GR V AV A ME+ A+D + +G+D G + +E+P++
Sbjct: 5 NKIPVVINGAGGKMGREVVKAVAGAADMEIIAAVDKNPALLGQDAGEIAGC-GAVEVPIV 63
Query: 92 SDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAF 151
+DL L +QSK + V++DFT S VY N + A A+G+R VV + E ++ L F
Sbjct: 64 NDLEASLVMATQSKIQGVMVDFTHPSGVYANTRAAIAYGVRPVVGTTGLSEEQINDLKEF 123
Query: 152 CDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARVRYMTRTLI 205
+KAS G LI P SIG +LLQQA++ A+ ++ +VEI+E N + + T I
Sbjct: 124 AEKASTGALIIPNFSIGVVLLQQASLQAAKYFDHVEIIELHHNQKADAPSGTAI 177
>sp|Q7NLC0|DAPB_GLOVI 4-hydroxy-tetrahydrodipicolinate reductase OS=Gloeobacter violaceus
(strain PCC 7421) GN=dapB PE=3 SV=1
Length = 269
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 95/161 (59%), Gaps = 1/161 (0%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLT 95
I V++ G ++GR V AV A M V GA+D + ED G + + P+++ V +L
Sbjct: 3 IPVVVVGCAGKMGREVVKAVHAAPDMAVVGAVDRSHIDEDAGELAGI-GPIDVLVTDNLE 61
Query: 96 MVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKA 155
+ ++Q +A V++DFT +YD V+ A A+G+R VV + E + L+ F DKA
Sbjct: 62 ITCAMVAQERAPGVMVDFTHPRGIYDRVRSAIAYGVRPVVGTTGLPPEHIEELAEFADKA 121
Query: 156 SMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR 196
S GC++AP +IG ILLQQA + A+ ++ +VEI+E N +
Sbjct: 122 STGCIVAPNFAIGMILLQQACLRAAEYFDHVEIIELHHNRK 162
>sp|B0CE31|DAPB_ACAM1 4-hydroxy-tetrahydrodipicolinate reductase OS=Acaryochloris marina
(strain MBIC 11017) GN=dapB PE=3 SV=1
Length = 275
Score = 108 bits (270), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 114/222 (51%), Gaps = 14/222 (6%)
Query: 38 VIINGAVKEIGRAAVIAVTKARGMEVAGAID------SHSVGEDIGMVCDMEQPLEIPVM 91
VI+ GA ++GR + AV +A + + A+D S GE +G+ L I +
Sbjct: 9 VIVTGAAGKMGREVIKAVVQADDLRLYAAVDRNPDVFSLDAGELVGL-----DTLNIELT 63
Query: 92 SDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAF 151
++L VL + +Q K V++DFT S+VY N++ A A+G+ V+ + E ++ L+ F
Sbjct: 64 NELEPVLAAAAQEKQPCVMVDFTHPSSVYSNIRSAIAYGVFPVIGTTGLSDEQMNDLTEF 123
Query: 152 CDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARVRYMTRTLISMQVCL 211
+KASMGCL+ P SIG +LLQQAA+ AS ++ +VEI+E N + + T + L
Sbjct: 124 TEKASMGCLVIPNFSIGMVLLQQAAVQASQYFDHVEIIELHHNQKADAPSGTAVKTAQLL 183
Query: 212 RHIYLYPKFQNNNSFHTKRKLKIASSIIGVGEILILSKILPS 253
+ K N K L A +G I I S LP
Sbjct: 184 GDL---GKTYNPALVEEKEHLAGARGSLGSENIRIHSIRLPG 222
>sp|Q7V1N1|DAPB_PROMP 4-hydroxy-tetrahydrodipicolinate reductase OS=Prochlorococcus
marinus subsp. pastoris (strain CCMP1986 / MED4) GN=dapB
PE=3 SV=1
Length = 282
Score = 98.2 bits (243), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 108/202 (53%), Gaps = 10/202 (4%)
Query: 38 VIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH--SVGEDIGMVCDMEQPLEIPVMSDLT 95
V+++GA+ +G V +V + E+ AID++ + GE+I + ++++ ++ V +DL
Sbjct: 11 VLVSGALGRMGSEVVNSVLNSSDCELVAAIDTNKKNNGENISQLLNLKKS-DVLVSNDLE 69
Query: 96 MVLGSISQS----KARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAF 151
L SISQ K + V++DFT +VY+N + A A+G+ VV + ++ L+ F
Sbjct: 70 GSLCSISQDYRNEKIKPVLVDFTHPDSVYENTRSAIAYGISPVVGTTGLTPSQINDLAIF 129
Query: 152 CDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARVRYMTRTLISMQVCL 211
KA++GC I P S+G +LLQQAA A+ Y N+E++E N + + T I +
Sbjct: 130 AQKANIGCAIIPNFSVGMVLLQQAASVAAKFYDNIELIEMHHNQKADSPSGTCIKTAEMI 189
Query: 212 RHIYLYPKFQNNNSFHTKRKLK 233
YPK N + LK
Sbjct: 190 EE---YPKKYNQSLVEESESLK 208
>sp|A5GSL5|DAPB_SYNR3 4-hydroxy-tetrahydrodipicolinate reductase OS=Synechococcus sp.
(strain RCC307) GN=dapB PE=3 SV=1
Length = 273
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 93/174 (53%), Gaps = 3/174 (1%)
Query: 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS--HSVGEDIGMVCDMEQPLEIPVM 91
I V++ GA+ +G + AV A ++ GAID+ GED+G+ + + LE+ +
Sbjct: 3 DQIPVVVAGALGRMGAEVIKAVHTAGDCQLVGAIDTCPGREGEDVGLALGLGE-LEVALT 61
Query: 92 SDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAF 151
D L SQ AV++DFT VY++ + A A+G+ V+ + E + L++F
Sbjct: 62 QDFEGALCLASQQHPGAVLVDFTHPKVVYEHTRAAIAYGVTPVIGTTGLAPEQLQELASF 121
Query: 152 CDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARVRYMTRTLI 205
KASMG + P S+G +LLQQAA +A+ Y + E+VE N + + T I
Sbjct: 122 AAKASMGGAVIPNFSVGMVLLQQAAAAAARFYDHAELVELHHNRKADAPSGTCI 175
>sp|Q7V7D4|DAPB_PROMM 4-hydroxy-tetrahydrodipicolinate reductase OS=Prochlorococcus
marinus (strain MIT 9313) GN=dapB PE=3 SV=1
Length = 283
Score = 87.4 bits (215), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 111/225 (49%), Gaps = 20/225 (8%)
Query: 29 TNPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH------SVGEDIGMVCDM 82
T+ P I V++ GA+ +G + AV A E+ GA+D+ +GE++G+
Sbjct: 2 TSVPPELIPVVVVGALGRMGAEVIKAVHLASDCELVGAVDTTPGKEGVEIGEELGIGV-- 59
Query: 83 EQPLEIPVMSDLTMVLGSISQSKAR------AVVIDFTDASTVYDNVKQATAFGMRSVVY 136
L++ + SD+ L S+SQS R AV++DFT S VY++ + A A+G+ V+
Sbjct: 60 ---LDVALTSDIEACLCSVSQSFHRTGPGQGAVLVDFTHPSVVYEHTRAAFAYGVHPVIG 116
Query: 137 VPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR 196
+ + + LS F KASMG + P S+G +LLQQAA +A+ Y N E+ E N +
Sbjct: 117 TTGLSHQQLVDLSEFAAKASMGGAVIPNFSVGMVLLQQAAAAAARFYDNAELTELHHNRK 176
Query: 197 VRYMTRTLI---SMQVCLRHIYLYPKFQNNNSFHTKRKLKIASSI 238
+ T I M L + P+ + S R AS +
Sbjct: 177 ADAPSGTCIKTAEMMEELGKSFNSPEVDEHESLTGSRGGLRASGL 221
>sp|Q7VC38|DAPB_PROMA 4-hydroxy-tetrahydrodipicolinate reductase OS=Prochlorococcus
marinus (strain SARG / CCMP1375 / SS120) GN=dapB PE=3
SV=1
Length = 276
Score = 85.1 bits (209), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 93/167 (55%), Gaps = 7/167 (4%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSV--GEDIGMVCDMEQPLEIPVMSD 93
I V++ GA+ ++G + A+ K+ E+ AID+ + G DIG M+Q +++ V +D
Sbjct: 4 IPVLVAGALGKMGSEVIKAIYKSNDCELVAAIDNANEMEGVDIGTALGMDQ-MDVAVTAD 62
Query: 94 LTMVL----GSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALS 149
L L S+ S AV+IDFT + VY++ + + A+G+ V+ + + + L
Sbjct: 63 LEGSLCVASQSVRNSSGNAVLIDFTHPNVVYEHSRASIAYGVHPVIGTTGLSIVQLEELR 122
Query: 150 AFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR 196
F +KAS+G I P S+G +LLQQAA +A+ Y E+ ES N +
Sbjct: 123 EFANKASIGAAIIPNFSVGMVLLQQAAAAAASFYDYAELTESHHNQK 169
>sp|Q3AYN5|DAPB_SYNS9 4-hydroxy-tetrahydrodipicolinate reductase OS=Synechococcus sp.
(strain CC9902) GN=dapB PE=3 SV=1
Length = 277
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 97/178 (54%), Gaps = 7/178 (3%)
Query: 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS--HSVGEDIGMVCDMEQPLEIPVM 91
S I V++ GA+ +G + AV A ++ GAID+ G D+G+ +++ LE+ V
Sbjct: 3 SPIPVVVAGALGRMGAEVINAVVNAEDCQLVGAIDNTPGKEGTDVGLELGIKE-LEVAVT 61
Query: 92 SDLTMVLGSISQS----KARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSA 147
+D L ++SQS AV++DFT S V+D+ + A A+G+ V+ + ++
Sbjct: 62 ADFEGCLCAVSQSVRNSDQNAVLVDFTHPSVVFDHTRAAIAYGVHPVIGTTGLSPIQLND 121
Query: 148 LSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARVRYMTRTLI 205
L+ F KAS+G + P S+G +LLQQAA +A+ Y + E+ E N + + T I
Sbjct: 122 LTEFSAKASIGGAVIPNFSVGMVLLQQAAAAAARFYDHAELTELHHNRKADAPSGTCI 179
>sp|Q46KV7|DAPB_PROMT 4-hydroxy-tetrahydrodipicolinate reductase OS=Prochlorococcus
marinus (strain NATL2A) GN=dapB PE=3 SV=1
Length = 282
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 95/179 (53%), Gaps = 9/179 (5%)
Query: 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS--VGEDIGMVCDMEQPLEIPVMS 92
+I V++ GA+ +G V A+ ++ ++ GAID+ G+DIG + + + L++ + S
Sbjct: 7 SIPVLVAGAMGRMGSEVVKAINSSKDFQLVGAIDNQKDKEGQDIGSLLGLGE-LDVFLSS 65
Query: 93 DLTMVLGSISQ------SKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVS 146
D L + SQ S AV++DFT Y + + + A+G+ V+ I + +
Sbjct: 66 DFEGSLCAASQNVPKDGSNNGAVLVDFTHPKFAYKHTRTSIAYGVHPVIGTTGITADQLD 125
Query: 147 ALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARVRYMTRTLI 205
LS F DKAS+G I P S+G +LLQQAA +A+ Y+ E+ E N + + T I
Sbjct: 126 DLSKFADKASLGSAIIPNFSVGMVLLQQAAAAAARFYEFAELTEMHHNKKADAPSGTCI 184
>sp|Q24UK0|DAPB_DESHY 4-hydroxy-tetrahydrodipicolinate reductase OS=Desulfitobacterium
hafniense (strain Y51) GN=dapB PE=3 SV=1
Length = 267
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 84/156 (53%), Gaps = 4/156 (2%)
Query: 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDL 94
I+V ++GA ++GR V + M++ GA D+ G DIG + M PL I + L
Sbjct: 3 KIRVFVSGAGGKMGREVVRTILDQEDMQLVGASDARQQGRDIGELLAM-APLGIEITGPL 61
Query: 95 TMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDK 154
+ + +++A +++DFT+ +V N K A A G+ V+ + +S + D+
Sbjct: 62 EVA--HLKETRAD-IMVDFTNPQSVLKNAKCALAAGVVPVLGTTGLDEADISEIRDLVDQ 118
Query: 155 ASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE 190
+G IAP +IG+IL+ + A A+ ++ +VEI+E
Sbjct: 119 TKVGAFIAPNFAIGAILMMRFAQEAAKYFPHVEIIE 154
>sp|B8FQZ3|DAPB_DESHD 4-hydroxy-tetrahydrodipicolinate reductase OS=Desulfitobacterium
hafniense (strain DCB-2 / DSM 10664) GN=dapB PE=3 SV=1
Length = 267
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 84/156 (53%), Gaps = 4/156 (2%)
Query: 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDL 94
I+V ++GA ++GR V + M++ GA D+ G DIG + M PL I + L
Sbjct: 3 KIRVFVSGAGGKMGREVVRTILDQEDMQLVGASDARQQGRDIGELLAM-APLGIEITGPL 61
Query: 95 TMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDK 154
+ + +++A +++DFT+ +V N K A A G+ V+ + +S + D+
Sbjct: 62 EVA--HLKETRAD-IMVDFTNPQSVLKNAKCALAAGVVPVLGTTGLDEADISEIRDLVDQ 118
Query: 155 ASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE 190
+G IAP +IG+IL+ + A A+ ++ +VEI+E
Sbjct: 119 TKVGAFIAPNFAIGAILMMRFAQEAAKYFPHVEIIE 154
>sp|Q7U807|DAPB_SYNPX 4-hydroxy-tetrahydrodipicolinate reductase OS=Synechococcus sp.
(strain WH8102) GN=dapB PE=3 SV=1
Length = 277
Score = 74.7 bits (182), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 7/177 (3%)
Query: 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS--HSVGEDIGMVCDMEQPLEIPVMS 92
+I V++ GA+ +G + AV + + GAID+ G DI + LE+ V +
Sbjct: 4 SIPVVVAGALGRMGAEVIKAVVGSADCMLVGAIDNTPGKEGSDI-GLELGLGELEVAVTA 62
Query: 93 DLTMVLGSISQS----KARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSAL 148
D L ++SQS +A AV++DFT S VY++ + A A+G+ V+ + E +S L
Sbjct: 63 DFEGCLCAVSQSVRDAEAGAVLVDFTHPSVVYEHTRAAIAYGVHPVIGTTGLSPEQLSDL 122
Query: 149 SAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARVRYMTRTLI 205
F KAS+G + P S+G +LLQQAA +A+ Y + E+ E N + + T I
Sbjct: 123 CQFAAKASIGGAVIPNFSVGMVLLQQAAAAAARFYDHAELTELHHNCKADAPSGTCI 179
>sp|Q3AIK8|DAPB_SYNSC 4-hydroxy-tetrahydrodipicolinate reductase OS=Synechococcus sp.
(strain CC9605) GN=dapB PE=3 SV=1
Length = 277
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 93/176 (52%), Gaps = 7/176 (3%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS--HSVGEDIGMVCDMEQPLEIPVMSD 93
I V++ GA+ +G + AV A + GAID+ G D+ + LE+ V +D
Sbjct: 5 IPVVVAGALGRMGAEVIKAVVGAEDCSLVGAIDNTPGKEGADV-GLELGLGELEVAVTAD 63
Query: 94 LTMVLGSISQS----KARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALS 149
L ++SQS + AV++DFT S VY++ + A A+G+ V+ + E ++ L+
Sbjct: 64 FEGCLCAVSQSVRDSGSGAVLVDFTHPSVVYEHTRAAIAYGVHPVIGTTGLSPEQLNDLT 123
Query: 150 AFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARVRYMTRTLI 205
F KAS+G + P S+G +LLQQAA +A+ Y + E+ E N + + T I
Sbjct: 124 EFSAKASVGGAVIPNFSVGMVLLQQAAAAAARFYDHAELTELHHNRKADAPSGTCI 179
>sp|B5YEB2|DAPB_DICT6 4-hydroxy-tetrahydrodipicolinate reductase OS=Dictyoglomus
thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12)
GN=dapB PE=3 SV=1
Length = 268
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 80/163 (49%), Gaps = 11/163 (6%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQ-PLEIPVMSDL 94
IK I+ GA ++GR A+ A +E+ GAID + GE + ++ LE
Sbjct: 2 IKTILFGACGKMGRVIGKALIDAVDIELVGAIDPYFKGEKYEKIIGTDKISLE------- 54
Query: 95 TMVLGSISQSKAR-AVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCD 153
VLGSI + K V +DFT+A Y N+K+ G R VV + E ++
Sbjct: 55 --VLGSIEELKEDFDVAVDFTNAEAAYQNIKKILQMGKRMVVGTTGLTQEMINEFKDLAV 112
Query: 154 KASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR 196
K + LIAP ++G++L+ Q A ++ +VEI+E N +
Sbjct: 113 KNNTAILIAPNFALGAVLMIQLAKQVVKYFPDVEIIELHHNEK 155
>sp|Q8EQD3|DAPB_OCEIH 4-hydroxy-tetrahydrodipicolinate reductase OS=Oceanobacillus
iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 /
HTE831) GN=dapB PE=3 SV=1
Length = 265
Score = 71.2 bits (173), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 4/162 (2%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLT 95
I +I+ G +G AV +TK + +D G ++G + L++P+ +D+
Sbjct: 3 INIIVAGPRGRMGYEAVQMITKEDSFRLVACLDHKHDGLNLGELEQFSDDLQVPIYTDID 62
Query: 96 MVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKA 155
L Q +A V +D T Y + K A + +R VV E +S L +
Sbjct: 63 SCL---KQHQAD-VFVDLTTPEVGYKHTKTALEYKVRPVVGTTGFTDEQLSELKELSKQQ 118
Query: 156 SMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARV 197
GC+IAP +IG++L+ + + A+ ++ NVEI+E + ++
Sbjct: 119 QRGCIIAPNFAIGAVLMMKFSKMAAKYFPNVEIIEKHHDQKL 160
>sp|B1HTF0|DAPB_LYSSC 4-hydroxy-tetrahydrodipicolinate reductase OS=Lysinibacillus
sphaericus (strain C3-41) GN=dapB PE=3 SV=1
Length = 265
Score = 70.9 bits (172), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 81/156 (51%), Gaps = 4/156 (2%)
Query: 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDL 94
+I+V I GA ++G AV V K ME+ +D VG+ + + +P+ +++
Sbjct: 2 SIRVAIAGARGKMGAEAVHTVMKHDKMELVAVLDYKEVGKTLADLDMFPASYTVPIFTEM 61
Query: 95 TMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDK 154
+ ++ + V++D T+ +VY++ K+A +R V+ + LS +
Sbjct: 62 H----DLVEATSPDVLVDLTNPHSVYNHTKEALNLNVRPVIGTTGFTDAQLEELSTIAKE 117
Query: 155 ASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE 190
+GC+IAP +IG+IL+ + A A+ + +VEI+E
Sbjct: 118 KELGCIIAPNFAIGAILMMKFAKEAAKYLPDVEIIE 153
>sp|B8DC19|DAPB_LISMH 4-hydroxy-tetrahydrodipicolinate reductase OS=Listeria
monocytogenes serotype 4a (strain HCC23) GN=dapB PE=3
SV=1
Length = 263
Score = 70.9 bits (172), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 5/155 (3%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLT 95
++V ++G +G V V + +E+ +D ++I + + L++PV +L+
Sbjct: 1 MRVAVSGFKGRMGHEVVKTVLREADLELVAVLDHEPKEKNINEIVEF-SSLDVPVFGNLS 59
Query: 96 MVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKA 155
+L I V+DFT Y N K G+R+VV E +S L + +
Sbjct: 60 EMLEEIKPD----CVVDFTTPKVGYSNTKTILEHGVRAVVGTTGFTPEQISELRSIAESK 115
Query: 156 SMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE 190
+G LIAP ++G++L+ Q A A+ ++ NVEI+E
Sbjct: 116 KIGALIAPNFAVGAVLMMQFAQKAAKYFPNVEIIE 150
>sp|C1KWK7|DAPB_LISMC 4-hydroxy-tetrahydrodipicolinate reductase OS=Listeria
monocytogenes serotype 4b (strain CLIP80459) GN=dapB
PE=3 SV=1
Length = 263
Score = 70.9 bits (172), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 5/155 (3%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLT 95
++V ++G +G V V + +E+ +D ++I + + L++PV +L+
Sbjct: 1 MRVAVSGFKGRMGHEVVKTVLREADLELVAVLDHEPKEKNINEIVEF-SSLDVPVFGNLS 59
Query: 96 MVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKA 155
+L I V+DFT Y N K G+R+VV E +S L + +
Sbjct: 60 EMLEEIKPD----CVVDFTTPKVGYSNTKTILEHGVRAVVGTTGFTPEQISELRSIAESK 115
Query: 156 SMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE 190
+G LIAP ++G++L+ Q A A+ ++ NVEI+E
Sbjct: 116 KIGALIAPNFAVGAVLMMQFAQKAAKYFPNVEIIE 150
>sp|Q71YA8|DAPB_LISMF 4-hydroxy-tetrahydrodipicolinate reductase OS=Listeria
monocytogenes serotype 4b (strain F2365) GN=dapB PE=3
SV=1
Length = 263
Score = 70.9 bits (172), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 5/155 (3%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLT 95
++V ++G +G V V + +E+ +D ++I + + L++PV +L+
Sbjct: 1 MRVAVSGFKGRMGHEVVKTVLREADLELVAVLDHEPKEKNINEIVEF-SSLDVPVFGNLS 59
Query: 96 MVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKA 155
+L I V+DFT Y N K G+R+VV E +S L + +
Sbjct: 60 EMLEEIKPD----CVVDFTTPKVGYSNTKTILEHGVRAVVGTTGFTPEQISELRSIAESK 115
Query: 156 SMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE 190
+G LIAP ++G++L+ Q A A+ ++ NVEI+E
Sbjct: 116 KIGALIAPNFAVGAVLMMQFAQKAAKYFPNVEIIE 150
>sp|Q8Y5Z6|DAPB_LISMO 4-hydroxy-tetrahydrodipicolinate reductase OS=Listeria
monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
GN=dapB PE=3 SV=1
Length = 263
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 5/155 (3%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLT 95
++V ++G +G V V + +E+ +D ++I + + L++PV +L+
Sbjct: 1 MRVAVSGFKGRMGHEVVKTVLREADLELVAVLDHEPKEKNINEMVEF-SSLDVPVFGNLS 59
Query: 96 MVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKA 155
+L I V+DFT Y N K G+R+VV E +S L +
Sbjct: 60 EMLEEIKPD----CVVDFTTPKVGYSNTKTILEHGVRAVVGTTGFTPEQISELRTIAESK 115
Query: 156 SMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE 190
+G LIAP ++G++L+ Q A A+ ++ NVEI+E
Sbjct: 116 KIGALIAPNFAVGAVLMMQFAQKAAKYFPNVEIIE 150
>sp|Q92AA1|DAPB_LISIN 4-hydroxy-tetrahydrodipicolinate reductase OS=Listeria innocua
serovar 6a (strain CLIP 11262) GN=dapB PE=3 SV=1
Length = 263
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 5/155 (3%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLT 95
+KV ++G +G V + + +E+ +D ++I + + L++PV DL+
Sbjct: 1 MKVAVSGFKGRMGHEVVKTILREEDLELVAVLDHEPKEKNIREIVEF-SSLDVPVYGDLS 59
Query: 96 MVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKA 155
+L I V+DFT Y N K +R+VV E +S L + +
Sbjct: 60 EMLEEIKPD----CVVDFTIPKVGYSNTKTILEHSVRAVVGTTGFTPEQISELKSIAESK 115
Query: 156 SMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE 190
+G LIAP ++G++L+ Q A A+ ++ NVEI+E
Sbjct: 116 KIGALIAPNFAVGAVLMMQFAQKAAKYFPNVEIIE 150
>sp|A0AK12|DAPB_LISW6 4-hydroxy-tetrahydrodipicolinate reductase OS=Listeria welshimeri
serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334)
GN=dapB PE=3 SV=1
Length = 263
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 79/155 (50%), Gaps = 5/155 (3%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLT 95
+KV ++G +G V V + +E+ +D ++I + + L++PV ++L+
Sbjct: 1 MKVAVSGFKGRMGHEVVKTVLREEDLELVAVLDHEPKEKNIREIVEF-SSLDVPVYANLS 59
Query: 96 MVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKA 155
+L ++K VV DFT Y N K G+R+VV E + +L +
Sbjct: 60 EML---EEAKPDCVV-DFTTPKVGYSNTKTILEHGVRAVVGTTGFTPEQIESLREIAETK 115
Query: 156 SMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE 190
+G LIAP ++G++L+ Q A A+ ++ NVEI+E
Sbjct: 116 KIGALIAPNFAVGAVLMMQFAQKAAKYFPNVEIIE 150
>sp|Q2RJL2|DAPB_MOOTA 4-hydroxy-tetrahydrodipicolinate reductase OS=Moorella
thermoacetica (strain ATCC 39073) GN=dapB PE=3 SV=1
Length = 267
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 78/157 (49%), Gaps = 5/157 (3%)
Query: 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSD 93
+ I+V++ GA +GR + + + V GA+D VG DIG + + P + + D
Sbjct: 3 ATIRVVVTGAAGRMGREMTRGLLQTEDIAVVGAVDRREVGVDIGSLNGL-PPAGVIIQED 61
Query: 94 LTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCD 153
L V+ S V++DFT A+ N + A G+ V+ I LE + L C+
Sbjct: 62 LAGVIASARPE----VMVDFTVAAAALANARLAVEQGVSPVIGTTGISLERLDELHQLCE 117
Query: 154 KASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE 190
+G ++AP S+G+IL+ A A+ ++ EI+E
Sbjct: 118 ARQVGAVVAPNFSLGAILMMHFAEEAARYFPRAEIIE 154
>sp|Q88W01|DAPB_LACPL 4-hydroxy-tetrahydrodipicolinate reductase OS=Lactobacillus
plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1)
GN=dapB PE=3 SV=1
Length = 261
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 86/189 (45%), Gaps = 10/189 (5%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLT 95
+KVI+ G +G A V E+ G D+ S +++G D + +P DL
Sbjct: 2 VKVIVAGYKGRMGSTAAQMVIDNPDFELVGVYDARSEEQNLGE-DDRFKGQNVPAFHDL- 59
Query: 96 MVLGSISQSKARAVV-IDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDK 154
Q K A V IDFT + VY+N K A G+ V+ + E V+ L
Sbjct: 60 ------DQIKTDATVWIDFTIPTAVYENAKFALNHGISPVIGTTGMTDEQVAELQKLAKD 113
Query: 155 ASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARVRYMTRTLISMQVCLRHI 214
+G LIAP I ++LL Q A A+ ++ +VEI+E + ++ + T IS + +
Sbjct: 114 KQVGGLIAPNFGISAVLLMQFAQQAAKYFPDVEIIEMHHDDKIDSPSGTAISTAKKIAEV 173
Query: 215 YLYPKFQNN 223
PK Q N
Sbjct: 174 R-QPKEQGN 181
>sp|A7GN70|DAPB_BACCN 4-hydroxy-tetrahydrodipicolinate reductase OS=Bacillus cereus
subsp. cytotoxis (strain NVH 391-98) GN=dapB PE=3 SV=1
Length = 266
Score = 67.8 bits (164), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 6/189 (3%)
Query: 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDL 94
+IKVII G +G AV+ + + + A+D GE I + M L++P+ DL
Sbjct: 3 DIKVIIAGPRGRMGHEAVLLMERTPHFQFVAAVDYKHGGEKISDLPGM-PALDVPIYEDL 61
Query: 95 TMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDK 154
L I V++D T +V A G+RSV+ E + L+ +
Sbjct: 62 HTCLDEIEAD----VLLDLTTPEVGKKHVTLAVEHGLRSVIGTTGFTEEELQHLTNIAKE 117
Query: 155 ASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARVRYMTRTLISMQVCLRHI 214
+G +IAP +IG++L+ + + A+ ++++VEI+E + ++ + T + +R
Sbjct: 118 KEVGTIIAPNFAIGAVLMMKFSQMAAKYFQDVEIIELHHDQKLDAPSGTAVKTVDLIRQ- 176
Query: 215 YLYPKFQNN 223
+ PK Q +
Sbjct: 177 HREPKQQGH 185
>sp|Q834S6|DAPB_ENTFA 4-hydroxy-tetrahydrodipicolinate reductase OS=Enterococcus faecalis
(strain ATCC 700802 / V583) GN=dapB PE=3 SV=1
Length = 259
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 70/155 (45%), Gaps = 9/155 (5%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLT 95
IK+I+ G +G A V + E+ G D H E + + IPV L
Sbjct: 2 IKIIVAGFKGRMGSTATQMVLETADFELVGVYDPHEAQETVSFNDETA----IPVFQRLE 57
Query: 96 MVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKA 155
VL V IDFT Y N + A GM VV E ++ L+ +
Sbjct: 58 EVLAVKPD-----VWIDFTVPEAAYPNTRFALEHGMAPVVGTTGFTEEQINELTNLSREK 112
Query: 156 SMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE 190
++G LIAP +IG++L+ Q A A+ ++ +VEI+E
Sbjct: 113 AIGGLIAPNFAIGAVLMMQFAQKAAQYFPDVEIIE 147
>sp|Q8DUL9|DAPB_STRMU 4-hydroxy-tetrahydrodipicolinate reductase OS=Streptococcus mutans
serotype c (strain ATCC 700610 / UA159) GN=dapB PE=3
SV=1
Length = 255
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 14/185 (7%)
Query: 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDL 94
+IKVI+ G +G AV + +E+A +D + ++I V PV +D
Sbjct: 2 SIKVIVAGFKGRMGSTAVDMIKNDSELELAALLDPFAAEKEIDGV---------PVFTDK 52
Query: 95 TMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDK 154
+ ++G ++ V +DFT Y+N A G R VV E ++ L
Sbjct: 53 SDLVGLDAE-----VWVDFTIPKVAYENTHFALENGFRPVVGTTGFTQEQIADLMTLSAD 107
Query: 155 ASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARVRYMTRTLISMQVCLRHI 214
+G LIAP +IG++LL + A AS ++ ++EI+E + + + T + +R
Sbjct: 108 KKLGGLIAPNFAIGAVLLMEFAAKASKYFPDLEIIELHHDKKKDAPSGTAVKTAELIREA 167
Query: 215 YLYPK 219
Y K
Sbjct: 168 RAYKK 172
>sp|A3CMU3|DAPB_STRSV 4-hydroxy-tetrahydrodipicolinate reductase OS=Streptococcus
sanguinis (strain SK36) GN=dapB PE=3 SV=1
Length = 255
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 75/156 (48%), Gaps = 14/156 (8%)
Query: 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDL 94
+IKVII G ++G+AA VT+ +E+ G +D + D ++ +PV +
Sbjct: 2 SIKVIIAGFKGKMGQAAYKMVTEDSELELVGLLDPFT---------DEKEVAGVPVFNAK 52
Query: 95 TMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDK 154
+ G + V +DFT YDN + A G VV E + L +
Sbjct: 53 EELAGLEAH-----VWVDFTTPKVAYDNTRFALEQGFCPVVGTTGFTPEQLEELITLSRE 107
Query: 155 ASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE 190
+G LIAP ++G++LL Q A A+ ++ NVEI+E
Sbjct: 108 KKLGGLIAPNFALGAVLLMQFAAQAAKYFANVEIIE 143
>sp|A8AX95|DAPB_STRGC 4-hydroxy-tetrahydrodipicolinate reductase OS=Streptococcus
gordonii (strain Challis / ATCC 35105 / CH1 / DL1 /
V288) GN=dapB PE=3 SV=1
Length = 255
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 14/156 (8%)
Query: 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDL 94
IK+II G ++G+AA VT+ +E+ G +D + D ++ +PV +
Sbjct: 2 GIKIIIAGFKGKMGQAAYKMVTEDPELELVGLLDPFT---------DEKEVAGVPVFNAK 52
Query: 95 TMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDK 154
+ G + V +DFT YDN + A G VV E + L +
Sbjct: 53 EELAGLEAH-----VWVDFTTPKVAYDNTRFALEQGFCPVVGTTGFTPEQLEELITLSRE 107
Query: 155 ASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE 190
+G LIAP ++G++LL Q A A+ ++ NVEI+E
Sbjct: 108 KQLGGLIAPNFALGAVLLMQFAAQAAKYFPNVEIIE 143
>sp|B8E2S7|DAPB_DICTD 4-hydroxy-tetrahydrodipicolinate reductase OS=Dictyoglomus turgidum
(strain Z-1310 / DSM 6724) GN=dapB PE=3 SV=1
Length = 268
Score = 64.3 bits (155), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 83/180 (46%), Gaps = 11/180 (6%)
Query: 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQ-PLEIPVMSDL 94
IK ++ GA ++G+ A+ A +E+ GAID + GE + +++ LE
Sbjct: 2 IKTVLFGACGKMGKVIGKALIDATDIELVGAIDPYFKGEKYEKIIGIDKISLE------- 54
Query: 95 TMVLGSISQ-SKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCD 153
V+ SI + + V IDFT+A Y N+K+ G R VV + E +
Sbjct: 55 --VVESIDELQEDFDVAIDFTNAEAAYQNIKKVLQKGKRMVVGTTGLTQEMMEEFKDLAV 112
Query: 154 KASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARVRYMTRTLISMQVCLRH 213
K LIAP ++G++L+ Q A ++ +VEI+E N + + T I LR
Sbjct: 113 KNKTAILIAPNFALGAVLMIQLAKQVVKYFPDVEIIELHHNEKADAPSGTAILTAEVLRE 172
>sp|Q63DK0|DAPB_BACCZ 4-hydroxy-tetrahydrodipicolinate reductase OS=Bacillus cereus
(strain ZK / E33L) GN=dapB PE=3 SV=1
Length = 266
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDL 94
IKVII G +G AV+ + + + A+D GE I + M L+ P+ +DL
Sbjct: 3 EIKVIIAGPRGRMGHEAVLLMERTEHFNLVAAVDYKHGGEKISDLPGM-PALDAPIYADL 61
Query: 95 TMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDK 154
L + V++D T +V A G+RSV+ E + L+ +
Sbjct: 62 HTCLEEVEAD----VLLDLTTPEVGKQHVTLAVERGLRSVIGTTGFTEEELKQLTEIAKE 117
Query: 155 ASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE 190
++G +IAP +IG++L+ + + A+ ++++VE++E
Sbjct: 118 KAVGTIIAPNFAIGAVLMMKFSQMAAKYFQDVEVIE 153
>sp|Q73AW1|DAPB_BACC1 4-hydroxy-tetrahydrodipicolinate reductase OS=Bacillus cereus
(strain ATCC 10987) GN=dapB PE=3 SV=1
Length = 266
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDL 94
IKVII G +G AV+ + + + A+D GE I + M L+ P+ +DL
Sbjct: 3 EIKVIIAGPRGRMGHEAVLLMERTEHFNLVAAVDYKHGGEKISDLPGM-PALDTPIYADL 61
Query: 95 TMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDK 154
L + V++D T +V A G+RSV+ E + L+ +
Sbjct: 62 HTCLEEVEAD----VLLDLTTPEVGKQHVTLAVERGLRSVIGTTGFTEEELKQLTETAKE 117
Query: 155 ASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE 190
++G +IAP +IG++L+ + + A+ ++++VE++E
Sbjct: 118 KAVGTIIAPNFAIGAVLMMKFSQMAAKYFQDVEVIE 153
>sp|B9IVQ5|DAPB_BACCQ 4-hydroxy-tetrahydrodipicolinate reductase OS=Bacillus cereus
(strain Q1) GN=dapB PE=3 SV=1
Length = 266
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Query: 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDL 94
IKVII G +G AV+ + + + A+D GE I + M L+ P+ DL
Sbjct: 3 EIKVIIAGPRGRMGHEAVLLMERTEHFNLVAAVDYKHGGEKISDLPGM-PALDTPIYGDL 61
Query: 95 TMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDK 154
L + V++D T +V A G+RSV+ E + L+ +
Sbjct: 62 HTCLEEVEAD----VLLDLTTPEVGKQHVTLAVERGLRSVIGTTGFTEEELKQLTETAKE 117
Query: 155 ASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE 190
++G +IAP +IG++L+ + + A+ ++++VE++E
Sbjct: 118 KAVGTIIAPNFAIGAVLMMKFSQMAAKYFQDVEVIE 153
>sp|B7HL46|DAPB_BACC7 4-hydroxy-tetrahydrodipicolinate reductase OS=Bacillus cereus
(strain AH187) GN=dapB PE=3 SV=1
Length = 266
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Query: 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDL 94
IKVII G +G AV+ + + + A+D GE I + M L+ P+ DL
Sbjct: 3 EIKVIIAGPRGRMGHEAVLLMERTEHFNLVAAVDYKHGGEKISDLPGM-PALDTPIYGDL 61
Query: 95 TMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDK 154
L + V++D T +V A G+RSV+ E + L+ +
Sbjct: 62 HTCLEEVEAD----VLLDLTTPEVGKQHVTLAVERGLRSVIGTTGFTEEELKQLTETAKE 117
Query: 155 ASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE 190
++G +IAP +IG++L+ + + A+ ++++VE++E
Sbjct: 118 KAVGTIIAPNFAIGAVLMMKFSQMAAKYFQDVEVIE 153
>sp|B5E6K0|DAPB_STRP4 4-hydroxy-tetrahydrodipicolinate reductase OS=Streptococcus
pneumoniae serotype 19F (strain G54) GN=dapB PE=3 SV=1
Length = 255
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID---SHSVGEDIGMVCDMEQPLEIPVM 91
+I+VII G ++G+AA V +++ +D S S +DI PV
Sbjct: 2 SIRVIIAGFKGKMGQAACQMVLTDPDLDLVAVLDPFESESEWQDI------------PVF 49
Query: 92 SDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAF 151
D + G + V +DFT + Y+N + A G VV E ++ L F
Sbjct: 50 KDKADLAGFEAD-----VWVDFTTPAVAYENTRFALENGFAPVVGTTGFTSEEIAELKEF 104
Query: 152 CDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE 190
+G LIAP ++G++LL Q A A+ ++ NVEI+E
Sbjct: 105 SRAQDLGGLIAPNFALGAVLLMQFATQAAKYFPNVEIIE 143
>sp|Q81FP4|DAPB_BACCR 4-hydroxy-tetrahydrodipicolinate reductase OS=Bacillus cereus
(strain ATCC 14579 / DSM 31) GN=dapB PE=3 SV=1
Length = 266
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDL 94
IKVII G +G AV+ + + + A+D GE I + M L P+ +DL
Sbjct: 3 EIKVIIAGPRGRMGHEAVLLMERTEHFNLVAAVDYKHGGEKISDLPGM-PALHAPIYADL 61
Query: 95 TMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDK 154
L + V++D T +V A G+RSV+ E ++ L+ +
Sbjct: 62 HTCLDEVEAD----VLLDLTTPEVGKQHVTLAVERGLRSVIGTTGFTEEELTRLTENAKE 117
Query: 155 ASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE 190
++G +IAP +IG++L+ + + A+ ++++VE++E
Sbjct: 118 KAVGTIIAPNFAIGAVLMMKFSQMAAKYFQDVEVIE 153
>sp|Q0AXH2|DAPB_SYNWW 4-hydroxy-tetrahydrodipicolinate reductase OS=Syntrophomonas wolfei
subsp. wolfei (strain Goettingen) GN=dapB PE=3 SV=1
Length = 266
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 80/154 (51%), Gaps = 5/154 (3%)
Query: 37 KVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTM 96
+VI+ GA+ ++G+ + A+ +E+ A+D + GE + + + L+I + +DL
Sbjct: 6 RVIVAGALGKMGKETLKAIAGDEELELIAAVDIKAKGEKVADLIGI-AGLDISLENDLDE 64
Query: 97 VLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKAS 156
VL ++ V++DFT+ V++N + A G+ V+ + + L +
Sbjct: 65 VL----ENYQPDVLVDFTNPQAVFNNARSALKIGVFCVIGTTGLNEIEIKELEKLAGEKQ 120
Query: 157 MGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE 190
+G I P +IG++L+ + A A+ ++ VEI+E
Sbjct: 121 VGVAIIPNFAIGAVLMMKFASEAAKYFPEVEIIE 154
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.132 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,108,272
Number of Sequences: 539616
Number of extensions: 2715751
Number of successful extensions: 7659
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 122
Number of HSP's successfully gapped in prelim test: 178
Number of HSP's that attempted gapping in prelim test: 7429
Number of HSP's gapped (non-prelim): 304
length of query: 257
length of database: 191,569,459
effective HSP length: 115
effective length of query: 142
effective length of database: 129,513,619
effective search space: 18390933898
effective search space used: 18390933898
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)