Query 025154
Match_columns 257
No_of_seqs 261 out of 1697
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 04:46:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025154.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025154hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ijp_A DHPR, dihydrodipicolina 100.0 2.2E-61 7.6E-66 439.1 23.5 211 34-253 20-255 (288)
2 4f3y_A DHPR, dihydrodipicolina 100.0 1.5E-60 5E-65 430.9 23.4 209 35-253 7-240 (272)
3 3qy9_A DHPR, dihydrodipicolina 100.0 4.3E-58 1.5E-62 408.7 19.2 195 35-253 3-215 (243)
4 1dih_A Dihydrodipicolinate red 100.0 5.1E-56 1.8E-60 401.1 20.8 211 34-253 4-239 (273)
5 1vm6_A DHPR, dihydrodipicolina 100.0 6.9E-55 2.4E-59 383.1 21.1 178 35-253 12-195 (228)
6 1p9l_A Dihydrodipicolinate red 100.0 1.3E-54 4.4E-59 386.8 23.1 192 36-253 1-213 (245)
7 1oi7_A Succinyl-COA synthetase 99.7 1.2E-16 4.2E-21 144.7 13.8 120 34-169 6-126 (288)
8 1f06_A MESO-diaminopimelate D- 99.7 1.4E-17 4.8E-22 152.3 7.1 154 35-204 3-163 (320)
9 2yv2_A Succinyl-COA synthetase 99.7 3E-16 1E-20 142.7 13.8 119 35-169 13-133 (297)
10 2yv1_A Succinyl-COA ligase [AD 99.7 3.5E-16 1.2E-20 142.1 12.7 119 35-169 13-132 (294)
11 2nu8_A Succinyl-COA ligase [AD 99.7 9.4E-16 3.2E-20 138.7 15.2 120 34-169 6-126 (288)
12 4had_A Probable oxidoreductase 99.6 4.1E-16 1.4E-20 142.5 10.6 149 32-192 20-173 (350)
13 2dc1_A L-aspartate dehydrogena 99.6 6.5E-15 2.2E-19 128.4 11.6 144 36-204 1-150 (236)
14 3kux_A Putative oxidoreductase 99.6 6.6E-14 2.2E-18 128.6 18.7 147 32-192 4-154 (352)
15 4fb5_A Probable oxidoreductase 99.6 1E-14 3.5E-19 133.7 13.2 145 35-191 25-180 (393)
16 4ew6_A D-galactose-1-dehydroge 99.6 1.7E-14 5.9E-19 132.0 14.6 117 35-167 25-143 (330)
17 3rc1_A Sugar 3-ketoreductase; 99.6 9.5E-15 3.2E-19 134.5 12.5 146 35-192 27-176 (350)
18 3ec7_A Putative dehydrogenase; 99.6 2.4E-14 8.3E-19 132.1 15.1 150 34-195 22-178 (357)
19 3evn_A Oxidoreductase, GFO/IDH 99.6 3E-14 1E-18 129.7 14.8 146 34-191 4-153 (329)
20 3i23_A Oxidoreductase, GFO/IDH 99.6 8.5E-14 2.9E-18 127.8 17.9 149 34-193 1-153 (349)
21 3euw_A MYO-inositol dehydrogen 99.6 2.7E-14 9.2E-19 130.5 14.4 150 34-195 3-155 (344)
22 4hkt_A Inositol 2-dehydrogenas 99.6 3.6E-14 1.2E-18 129.0 13.4 148 34-194 2-152 (331)
23 3e9m_A Oxidoreductase, GFO/IDH 99.5 3.7E-14 1.3E-18 129.3 13.1 147 34-192 4-154 (330)
24 3db2_A Putative NADPH-dependen 99.5 2.5E-14 8.7E-19 131.3 11.8 146 34-191 4-152 (354)
25 3q2i_A Dehydrogenase; rossmann 99.5 6.5E-14 2.2E-18 128.6 14.3 146 34-191 12-161 (354)
26 3fhl_A Putative oxidoreductase 99.5 1.1E-13 3.7E-18 127.7 15.8 144 34-192 4-152 (362)
27 1ydw_A AX110P-like protein; st 99.5 4.6E-14 1.6E-18 129.9 12.9 123 34-166 5-132 (362)
28 3e18_A Oxidoreductase; dehydro 99.5 7.5E-14 2.6E-18 128.9 14.3 145 35-192 5-152 (359)
29 3moi_A Probable dehydrogenase; 99.5 3.3E-14 1.1E-18 132.4 11.9 145 35-191 2-150 (387)
30 3cea_A MYO-inositol 2-dehydrog 99.5 1.2E-13 4.3E-18 125.7 15.5 149 33-193 6-160 (346)
31 2ho3_A Oxidoreductase, GFO/IDH 99.5 9.9E-14 3.4E-18 125.8 14.7 132 35-177 1-136 (325)
32 3c1a_A Putative oxidoreductase 99.5 4.3E-14 1.5E-18 127.7 11.9 138 30-179 5-145 (315)
33 3ezy_A Dehydrogenase; structur 99.5 4.3E-14 1.5E-18 129.2 12.0 149 35-195 2-154 (344)
34 3e82_A Putative oxidoreductase 99.5 2.1E-13 7.3E-18 126.1 16.4 145 34-192 6-154 (364)
35 1lc0_A Biliverdin reductase A; 99.5 1.5E-13 5E-18 123.9 14.5 121 33-169 5-129 (294)
36 3mz0_A Inositol 2-dehydrogenas 99.5 7.3E-14 2.5E-18 127.7 12.7 149 35-195 2-157 (344)
37 3u3x_A Oxidoreductase; structu 99.5 5.3E-14 1.8E-18 130.1 11.8 165 13-191 5-175 (361)
38 1zh8_A Oxidoreductase; TM0312, 99.5 8E-14 2.7E-18 127.7 12.7 147 34-192 17-169 (340)
39 2nvw_A Galactose/lactose metab 99.5 1.2E-13 4.2E-18 132.8 13.7 172 9-192 5-202 (479)
40 4gqa_A NAD binding oxidoreduct 99.5 5.7E-14 1.9E-18 131.4 11.1 134 33-176 24-169 (412)
41 3f4l_A Putative oxidoreductase 99.5 1.2E-13 4.1E-18 126.5 12.7 147 35-193 2-153 (345)
42 1tlt_A Putative oxidoreductase 99.5 1.5E-13 5.2E-18 124.2 13.0 119 35-165 5-125 (319)
43 3upl_A Oxidoreductase; rossman 99.5 2.8E-13 9.5E-18 129.5 15.2 157 34-200 22-200 (446)
44 1h6d_A Precursor form of gluco 99.5 8.2E-14 2.8E-18 132.1 11.3 149 33-193 81-238 (433)
45 3o9z_A Lipopolysaccaride biosy 99.5 4E-13 1.4E-17 122.1 15.4 124 34-167 2-134 (312)
46 3ohs_X Trans-1,2-dihydrobenzen 99.5 1.3E-13 4.6E-18 125.5 12.2 149 35-195 2-156 (334)
47 3m2t_A Probable dehydrogenase; 99.5 2.3E-13 7.8E-18 125.6 13.7 148 35-193 5-156 (359)
48 3uuw_A Putative oxidoreductase 99.5 1.2E-13 4E-18 124.4 11.3 121 35-167 6-128 (308)
49 3gdo_A Uncharacterized oxidore 99.5 2.9E-13 9.9E-18 124.8 14.1 131 34-176 4-138 (358)
50 2glx_A 1,5-anhydro-D-fructose 99.5 3.2E-13 1.1E-17 122.3 12.8 144 36-192 1-149 (332)
51 3oa2_A WBPB; oxidoreductase, s 99.5 7.9E-13 2.7E-17 120.4 15.2 128 34-167 2-135 (318)
52 3bio_A Oxidoreductase, GFO/IDH 99.5 1.8E-13 6.3E-18 124.1 10.9 125 35-176 9-137 (304)
53 2ixa_A Alpha-N-acetylgalactosa 99.5 8.6E-13 2.9E-17 125.1 15.8 156 30-194 15-180 (444)
54 4h3v_A Oxidoreductase domain p 99.5 1.7E-13 5.7E-18 125.5 9.7 146 35-192 6-165 (390)
55 3oqb_A Oxidoreductase; structu 99.4 1.5E-13 5.3E-18 127.2 9.1 147 34-191 5-169 (383)
56 4gmf_A Yersiniabactin biosynth 99.4 1.5E-13 5.2E-18 128.4 8.7 119 34-166 6-129 (372)
57 3dty_A Oxidoreductase, GFO/IDH 99.4 4.2E-13 1.4E-17 125.3 11.4 152 33-192 10-172 (398)
58 3ip3_A Oxidoreductase, putativ 99.4 4.6E-13 1.6E-17 122.2 10.5 147 34-192 1-156 (337)
59 3btv_A Galactose/lactose metab 99.4 9.3E-13 3.2E-17 124.9 10.9 148 34-192 19-182 (438)
60 3v5n_A Oxidoreductase; structu 99.4 9.1E-13 3.1E-17 124.1 10.6 151 34-192 36-197 (417)
61 2p2s_A Putative oxidoreductase 99.4 3.4E-12 1.1E-16 116.2 13.6 144 35-191 4-153 (336)
62 3mwd_B ATP-citrate synthase; A 99.4 2.2E-12 7.6E-17 119.2 11.9 124 34-165 9-139 (334)
63 3do5_A HOM, homoserine dehydro 99.3 1E-12 3.5E-17 121.0 7.6 139 35-179 2-157 (327)
64 1xea_A Oxidoreductase, GFO/IDH 99.3 5.1E-12 1.7E-16 114.5 11.4 130 35-176 2-136 (323)
65 3ing_A Homoserine dehydrogenas 99.3 1.7E-12 5.7E-17 119.5 7.0 148 35-190 4-168 (325)
66 3mtj_A Homoserine dehydrogenas 99.2 1E-11 3.5E-16 118.6 8.7 133 35-179 10-152 (444)
67 1j5p_A Aspartate dehydrogenase 99.2 1.9E-11 6.7E-16 108.8 9.3 115 35-172 12-128 (253)
68 3c8m_A Homoserine dehydrogenas 99.2 9.1E-12 3.1E-16 114.6 6.6 139 35-179 6-163 (331)
69 2fp4_A Succinyl-COA ligase [GD 99.2 1.6E-10 5.4E-15 105.3 14.5 115 36-165 14-131 (305)
70 1ebf_A Homoserine dehydrogenas 99.0 7.1E-10 2.4E-14 103.1 10.2 126 34-169 3-149 (358)
71 2czc_A Glyceraldehyde-3-phosph 99.0 2.1E-09 7.3E-14 98.7 10.0 95 35-138 2-111 (334)
72 2g0t_A Conserved hypothetical 98.9 3.2E-09 1.1E-13 98.6 9.8 118 35-161 22-149 (350)
73 2ejw_A HDH, homoserine dehydro 98.9 9.9E-10 3.4E-14 101.3 6.1 120 35-172 3-131 (332)
74 2d59_A Hypothetical protein PH 98.9 1.3E-08 4.4E-13 82.7 11.8 113 35-171 22-137 (144)
75 1b7g_O Protein (glyceraldehyde 98.9 5E-09 1.7E-13 96.7 10.0 94 35-137 1-108 (340)
76 1y81_A Conserved hypothetical 98.9 1.9E-08 6.5E-13 81.3 12.0 113 34-170 13-128 (138)
77 2obn_A Hypothetical protein; s 98.8 6E-09 2E-13 96.7 7.2 114 37-160 9-131 (349)
78 1cf2_P Protein (glyceraldehyde 98.8 1.6E-08 5.5E-13 93.2 9.9 96 35-139 1-111 (337)
79 1iuk_A Hypothetical protein TT 98.8 2.2E-08 7.5E-13 81.1 9.6 115 35-171 13-130 (140)
80 3pff_A ATP-citrate synthase; p 98.8 2.3E-08 7.8E-13 101.8 10.8 124 33-164 494-624 (829)
81 3abi_A Putative uncharacterize 98.7 4.1E-09 1.4E-13 97.3 4.1 131 35-179 16-150 (365)
82 1nvm_B Acetaldehyde dehydrogen 98.7 4.2E-08 1.4E-12 89.5 9.6 99 34-140 3-107 (312)
83 2duw_A Putative COA-binding pr 98.7 5.3E-08 1.8E-12 79.2 9.1 113 35-169 13-128 (145)
84 3ff4_A Uncharacterized protein 98.7 9E-08 3.1E-12 76.1 9.0 111 35-171 4-117 (122)
85 4ina_A Saccharopine dehydrogen 98.6 1E-07 3.6E-12 89.4 9.2 147 35-191 1-167 (405)
86 2ep5_A 350AA long hypothetical 98.6 3E-07 1E-11 84.9 10.6 99 34-139 3-110 (350)
87 3dr3_A N-acetyl-gamma-glutamyl 98.5 5.8E-07 2E-11 82.9 11.7 100 35-140 4-109 (337)
88 2ozp_A N-acetyl-gamma-glutamyl 98.5 4.3E-07 1.5E-11 83.8 10.1 98 35-140 4-102 (345)
89 2dt5_A AT-rich DNA-binding pro 98.4 7.7E-07 2.6E-11 77.0 8.7 112 35-174 80-198 (211)
90 2z2v_A Hypothetical protein PH 98.4 6.3E-07 2.1E-11 83.2 8.1 135 35-191 16-157 (365)
91 1r0k_A 1-deoxy-D-xylulose 5-ph 98.4 5.4E-07 1.8E-11 84.6 7.5 121 34-160 3-147 (388)
92 1xyg_A Putative N-acetyl-gamma 98.4 7.1E-07 2.4E-11 82.8 8.2 97 35-140 16-115 (359)
93 1ys4_A Aspartate-semialdehyde 98.4 1.7E-06 6E-11 79.8 10.8 98 35-137 8-114 (354)
94 2vt3_A REX, redox-sensing tran 98.4 1.3E-06 4.4E-11 75.8 9.2 90 35-138 85-178 (215)
95 3e5r_O PP38, glyceraldehyde-3- 98.3 7E-07 2.4E-11 82.4 7.3 99 35-139 3-127 (337)
96 2uyy_A N-PAC protein; long-cha 98.3 3.4E-06 1.2E-10 75.5 11.0 137 13-165 5-151 (316)
97 3d1l_A Putative NADP oxidoredu 98.3 1.2E-06 4.1E-11 76.6 7.4 97 35-144 10-109 (266)
98 3ic5_A Putative saccharopine d 98.3 1.1E-05 3.8E-10 60.7 11.5 105 34-154 4-115 (118)
99 2ph5_A Homospermidine synthase 98.3 2.4E-06 8.1E-11 82.2 9.2 140 35-180 13-175 (480)
100 2yyy_A Glyceraldehyde-3-phosph 98.3 8.6E-07 2.9E-11 81.9 5.9 96 35-138 2-114 (343)
101 2ahr_A Putative pyrroline carb 98.2 2.3E-06 7.8E-11 74.4 7.7 98 34-147 2-100 (259)
102 2csu_A 457AA long hypothetical 98.2 3.4E-06 1.2E-10 80.6 9.3 111 35-164 8-128 (457)
103 2r00_A Aspartate-semialdehyde 98.2 3.6E-06 1.2E-10 77.4 9.0 92 34-137 2-96 (336)
104 2h78_A Hibadh, 3-hydroxyisobut 98.2 1.2E-05 4.2E-10 71.4 11.4 117 34-166 2-125 (302)
105 1yb4_A Tartronic semialdehyde 98.2 8.2E-06 2.8E-10 71.9 10.0 112 35-163 3-121 (295)
106 4huj_A Uncharacterized protein 98.2 2.4E-06 8.4E-11 73.2 6.3 127 26-167 14-153 (220)
107 3keo_A Redox-sensing transcrip 98.1 5.8E-06 2E-10 71.6 8.4 91 34-138 83-180 (212)
108 3cky_A 2-hydroxymethyl glutara 98.1 1.7E-05 5.9E-10 70.1 11.6 115 34-164 3-124 (301)
109 4dll_A 2-hydroxy-3-oxopropiona 98.1 2.4E-05 8.3E-10 70.6 12.8 118 32-165 28-151 (320)
110 3pef_A 6-phosphogluconate dehy 98.1 3.1E-05 1E-09 68.5 12.9 112 36-163 2-120 (287)
111 1u8f_O GAPDH, glyceraldehyde-3 98.1 3.8E-06 1.3E-10 77.3 7.1 96 35-135 3-120 (335)
112 3doj_A AT3G25530, dehydrogenas 98.1 3E-05 1E-09 69.7 12.7 117 31-163 17-140 (310)
113 3k96_A Glycerol-3-phosphate de 98.1 1.6E-05 5.4E-10 73.5 10.8 125 34-169 28-168 (356)
114 2cvz_A Dehydrogenase, 3-hydrox 98.1 1.7E-05 5.8E-10 69.5 10.2 113 35-165 1-117 (289)
115 2nqt_A N-acetyl-gamma-glutamyl 98.1 9.9E-06 3.4E-10 75.0 8.9 98 35-140 9-113 (352)
116 2gf2_A Hibadh, 3-hydroxyisobut 98.1 1.9E-05 6.4E-10 69.7 10.3 117 36-169 1-124 (296)
117 4dpk_A Malonyl-COA/succinyl-CO 98.1 9.3E-06 3.2E-10 75.4 8.5 131 34-171 6-160 (359)
118 4dpl_A Malonyl-COA/succinyl-CO 98.1 9.3E-06 3.2E-10 75.4 8.5 131 34-171 6-160 (359)
119 3hsk_A Aspartate-semialdehyde 98.0 1.6E-05 5.5E-10 74.4 9.9 99 35-139 19-126 (381)
120 3qsg_A NAD-binding phosphogluc 98.0 3.5E-05 1.2E-09 69.4 11.6 115 34-160 23-141 (312)
121 3cps_A Glyceraldehyde 3-phosph 98.0 7.3E-06 2.5E-10 76.1 7.2 102 32-138 14-138 (354)
122 1vpd_A Tartronate semialdehyde 98.0 3.1E-05 1.1E-09 68.4 11.0 113 35-163 5-124 (299)
123 1t4b_A Aspartate-semialdehyde 98.0 4.1E-05 1.4E-09 71.2 12.3 93 35-139 1-99 (367)
124 1vkn_A N-acetyl-gamma-glutamyl 98.0 1.6E-05 5.3E-10 73.8 8.8 98 34-140 12-110 (351)
125 1gr0_A Inositol-3-phosphate sy 98.0 9.5E-05 3.2E-09 68.6 13.4 136 33-175 13-210 (367)
126 3b1j_A Glyceraldehyde 3-phosph 98.0 1.5E-05 5.1E-10 73.6 8.0 94 35-132 2-117 (339)
127 4e21_A 6-phosphogluconate dehy 98.0 8.6E-05 2.9E-09 68.7 13.2 117 33-162 20-139 (358)
128 1rm4_O Glyceraldehyde 3-phosph 98.0 1.4E-05 4.7E-10 73.8 7.6 99 35-138 1-123 (337)
129 3pwk_A Aspartate-semialdehyde 98.0 2.3E-05 8E-10 73.0 9.1 94 35-140 2-98 (366)
130 1i36_A Conserved hypothetical 98.0 5.5E-05 1.9E-09 65.7 11.0 104 36-154 1-104 (264)
131 3qha_A Putative oxidoreductase 97.9 0.00012 4.2E-09 65.2 13.3 112 35-163 15-130 (296)
132 2hjs_A USG-1 protein homolog; 97.9 2.3E-05 7.9E-10 72.1 8.7 91 35-137 6-99 (340)
133 3tri_A Pyrroline-5-carboxylate 97.9 7.8E-05 2.7E-09 66.3 11.9 114 35-166 3-124 (280)
134 3pdu_A 3-hydroxyisobutyrate de 97.9 4.2E-05 1.4E-09 67.6 10.0 115 35-165 1-122 (287)
135 2axq_A Saccharopine dehydrogen 97.9 6.9E-05 2.4E-09 71.8 12.1 130 35-179 23-161 (467)
136 2d2i_A Glyceraldehyde 3-phosph 97.9 2E-05 6.8E-10 73.8 7.8 93 35-132 2-117 (380)
137 3c24_A Putative oxidoreductase 97.9 1E-05 3.6E-10 71.5 5.4 111 35-165 11-125 (286)
138 1gad_O D-glyceraldehyde-3-phos 97.9 2.8E-05 9.6E-10 71.4 8.2 101 35-140 1-122 (330)
139 3a06_A 1-deoxy-D-xylulose 5-ph 97.9 3.1E-05 1.1E-09 72.1 8.5 117 36-160 4-139 (376)
140 3obb_A Probable 3-hydroxyisobu 97.9 0.00011 3.7E-09 66.3 11.7 114 34-163 2-122 (300)
141 3cmc_O GAPDH, glyceraldehyde-3 97.9 1.8E-05 6.3E-10 72.8 6.6 96 35-135 1-118 (334)
142 3nkl_A UDP-D-quinovosamine 4-d 97.9 0.00015 5E-09 57.1 10.9 35 35-70 4-38 (141)
143 3uw3_A Aspartate-semialdehyde 97.9 0.00011 3.8E-09 68.7 11.8 94 34-139 3-102 (377)
144 3l6d_A Putative oxidoreductase 97.9 0.0001 3.5E-09 66.1 11.1 118 32-165 6-128 (306)
145 2x5j_O E4PDH, D-erythrose-4-ph 97.8 2.9E-05 1E-09 71.5 7.6 100 35-139 2-126 (339)
146 1jay_A Coenzyme F420H2:NADP+ o 97.8 5E-05 1.7E-09 63.7 8.4 120 36-168 1-138 (212)
147 4ezb_A Uncharacterized conserv 97.8 0.0002 7E-09 64.7 12.3 112 34-160 23-143 (317)
148 3pzr_A Aspartate-semialdehyde 97.8 0.00013 4.5E-09 68.0 11.1 92 36-139 1-98 (370)
149 3tz6_A Aspartate-semialdehyde 97.8 6.6E-05 2.2E-09 69.4 8.6 92 36-138 2-95 (344)
150 1ff9_A Saccharopine reductase; 97.8 0.00019 6.4E-09 68.3 12.0 129 35-179 3-141 (450)
151 3b1f_A Putative prephenate deh 97.8 0.00021 7.3E-09 62.9 11.4 112 35-160 6-123 (290)
152 4gbj_A 6-phosphogluconate dehy 97.7 0.00036 1.2E-08 62.6 12.8 115 36-166 6-125 (297)
153 3gt0_A Pyrroline-5-carboxylate 97.7 4.2E-05 1.5E-09 66.2 6.4 98 35-146 2-106 (247)
154 2rcy_A Pyrroline carboxylate r 97.7 0.00016 5.6E-09 62.5 9.4 92 35-146 4-100 (262)
155 2vns_A Metalloreductase steap3 97.7 0.00022 7.4E-09 60.8 9.9 121 30-169 23-152 (215)
156 2izz_A Pyrroline-5-carboxylate 97.7 0.0002 6.9E-09 64.6 10.1 98 35-145 22-126 (322)
157 1hdg_O Holo-D-glyceraldehyde-3 97.7 6.6E-05 2.3E-09 69.0 6.7 95 36-135 1-119 (332)
158 3g0o_A 3-hydroxyisobutyrate de 97.6 0.00028 9.7E-09 62.9 10.4 115 34-164 6-128 (303)
159 2pgd_A 6-phosphogluconate dehy 97.6 0.00067 2.3E-08 64.8 13.3 123 35-166 2-129 (482)
160 2iz1_A 6-phosphogluconate dehy 97.6 0.00057 1.9E-08 65.2 12.3 122 35-165 5-130 (474)
161 3e48_A Putative nucleoside-dip 97.5 0.00088 3E-08 58.2 12.2 112 36-160 1-136 (289)
162 1z82_A Glycerol-3-phosphate de 97.5 6.9E-05 2.4E-09 67.8 5.2 122 34-167 13-144 (335)
163 1pgj_A 6PGDH, 6-PGDH, 6-phosph 97.5 0.00031 1E-08 67.2 9.8 122 36-166 2-131 (478)
164 2zyd_A 6-phosphogluconate dehy 97.5 0.00058 2E-08 65.4 11.7 123 34-165 14-140 (480)
165 3ggo_A Prephenate dehydrogenas 97.5 0.00089 3E-08 60.5 12.2 102 35-151 33-141 (314)
166 2i76_A Hypothetical protein; N 97.5 9.7E-06 3.3E-10 71.6 -1.2 93 35-143 2-95 (276)
167 1evy_A Glycerol-3-phosphate de 97.5 0.00027 9.4E-09 64.4 8.4 120 37-167 17-158 (366)
168 3c85_A Putative glutathione-re 97.5 0.0024 8.4E-08 52.1 13.4 132 35-180 39-176 (183)
169 3dhn_A NAD-dependent epimerase 97.5 0.00088 3E-08 55.9 10.8 86 34-134 3-108 (227)
170 2g5c_A Prephenate dehydrogenas 97.4 0.0013 4.3E-08 57.6 11.6 103 35-152 1-110 (281)
171 1yj8_A Glycerol-3-phosphate de 97.4 0.0001 3.4E-09 67.8 4.4 141 9-167 3-176 (375)
172 1f0y_A HCDH, L-3-hydroxyacyl-C 97.4 0.00066 2.2E-08 60.4 9.5 32 35-69 15-46 (302)
173 2f1k_A Prephenate dehydrogenas 97.4 0.0015 5.3E-08 56.9 11.5 99 36-151 1-104 (279)
174 1obf_O Glyceraldehyde 3-phosph 97.4 0.00018 6E-09 66.3 5.5 97 35-135 1-121 (335)
175 4fgw_A Glycerol-3-phosphate de 97.4 0.00083 2.8E-08 63.0 10.2 137 25-169 24-188 (391)
176 2yv3_A Aspartate-semialdehyde 97.3 0.00027 9.3E-09 64.7 6.5 90 36-138 1-93 (331)
177 3pid_A UDP-glucose 6-dehydroge 97.3 0.0031 1.1E-07 59.8 13.8 116 34-165 35-178 (432)
178 1x0v_A GPD-C, GPDH-C, glycerol 97.3 0.0011 3.8E-08 59.8 10.3 123 35-167 8-159 (354)
179 3gg2_A Sugar dehydrogenase, UD 97.3 0.0021 7.2E-08 61.0 12.6 120 36-167 3-159 (450)
180 4a7p_A UDP-glucose dehydrogena 97.3 0.0026 8.7E-08 60.5 13.1 123 34-168 7-163 (446)
181 2ep7_A GAPDH, glyceraldehyde-3 97.3 0.00017 5.7E-09 66.6 4.6 97 35-136 2-120 (342)
182 1yqg_A Pyrroline-5-carboxylate 97.3 0.00051 1.8E-08 59.3 7.0 112 36-166 1-114 (263)
183 2p4q_A 6-phosphogluconate dehy 97.2 0.0034 1.2E-07 60.4 13.2 119 36-163 11-134 (497)
184 3dtt_A NADP oxidoreductase; st 97.2 0.0023 7.9E-08 55.3 11.0 91 34-137 18-124 (245)
185 2o3j_A UDP-glucose 6-dehydroge 97.2 0.0042 1.4E-07 59.3 13.6 73 32-114 6-94 (481)
186 3r6d_A NAD-dependent epimerase 97.2 0.00094 3.2E-08 55.8 8.0 87 35-132 4-101 (221)
187 4gwg_A 6-phosphogluconate dehy 97.2 0.0053 1.8E-07 59.0 14.0 121 34-163 3-128 (484)
188 3m2p_A UDP-N-acetylglucosamine 97.2 0.0029 1E-07 55.5 11.1 88 35-134 2-105 (311)
189 2g1u_A Hypothetical protein TM 97.1 0.0047 1.6E-07 49.3 11.2 122 36-173 20-147 (155)
190 1lss_A TRK system potassium up 97.1 0.01 3.4E-07 45.4 12.4 125 35-175 4-134 (140)
191 3dqp_A Oxidoreductase YLBE; al 97.1 0.0012 4.1E-08 55.1 7.3 84 36-132 1-99 (219)
192 2wm3_A NMRA-like family domain 97.1 0.0084 2.9E-07 52.2 13.0 90 35-135 5-112 (299)
193 2b4r_O Glyceraldehyde-3-phosph 97.1 0.00075 2.6E-08 62.3 6.3 97 35-136 11-130 (345)
194 2raf_A Putative dinucleotide-b 97.0 0.0021 7.2E-08 54.4 8.5 74 34-141 18-94 (209)
195 3fr7_A Putative ketol-acid red 97.0 0.0018 6.3E-08 62.5 8.6 118 36-169 55-186 (525)
196 1bg6_A N-(1-D-carboxylethyl)-L 97.0 0.0032 1.1E-07 56.5 9.5 93 35-139 4-110 (359)
197 1txg_A Glycerol-3-phosphate de 97.0 0.0015 5E-08 58.3 7.2 121 36-167 1-142 (335)
198 3pym_A GAPDH 3, glyceraldehyde 97.0 0.0014 4.9E-08 60.2 7.1 98 35-136 1-120 (332)
199 2g82_O GAPDH, glyceraldehyde-3 96.9 0.0013 4.5E-08 60.3 6.8 98 36-139 1-120 (331)
200 1mv8_A GMD, GDP-mannose 6-dehy 96.9 0.0064 2.2E-07 57.1 11.7 68 36-114 1-84 (436)
201 2qyt_A 2-dehydropantoate 2-red 96.9 0.0018 6.2E-08 57.1 7.3 95 33-142 6-122 (317)
202 3fwz_A Inner membrane protein 96.9 0.0074 2.5E-07 47.4 10.1 129 30-175 2-137 (140)
203 3dmy_A Protein FDRA; predicted 96.9 0.003 1E-07 60.8 9.0 76 86-165 19-94 (480)
204 1hdo_A Biliverdin IX beta redu 96.9 0.0073 2.5E-07 49.0 10.3 83 36-132 4-104 (206)
205 2q3e_A UDP-glucose 6-dehydroge 96.9 0.015 5.1E-07 55.1 13.8 71 34-114 4-90 (467)
206 3slg_A PBGP3 protein; structur 96.9 0.0035 1.2E-07 56.3 8.9 91 35-137 24-140 (372)
207 3c7a_A Octopine dehydrogenase; 96.8 0.0054 1.8E-07 56.6 10.0 106 35-150 2-131 (404)
208 4e12_A Diketoreductase; oxidor 96.8 0.0044 1.5E-07 54.6 9.0 100 35-145 4-129 (283)
209 3ew7_A LMO0794 protein; Q8Y8U8 96.8 0.011 3.6E-07 48.7 10.8 84 36-134 1-99 (221)
210 3qvo_A NMRA family protein; st 96.8 0.011 3.9E-07 49.9 11.1 87 35-134 23-121 (236)
211 2y0c_A BCEC, UDP-glucose dehyd 96.8 0.02 6.9E-07 54.6 13.9 121 34-166 7-164 (478)
212 3g79_A NDP-N-acetyl-D-galactos 96.8 0.014 4.8E-07 55.9 12.7 125 33-166 16-183 (478)
213 4egb_A DTDP-glucose 4,6-dehydr 96.8 0.01 3.5E-07 52.6 11.1 96 34-134 23-145 (346)
214 3i6i_A Putative leucoanthocyan 96.8 0.0092 3.1E-07 53.3 10.8 33 35-68 10-42 (346)
215 3ktd_A Prephenate dehydrogenas 96.7 0.0099 3.4E-07 54.5 11.0 106 35-151 8-114 (341)
216 3h2s_A Putative NADH-flavin re 96.7 0.0071 2.4E-07 50.1 8.9 32 36-68 1-32 (224)
217 3lvf_P GAPDH 1, glyceraldehyde 96.7 0.003 1E-07 58.1 7.2 98 35-136 4-122 (338)
218 3v1y_O PP38, glyceraldehyde-3- 96.7 0.0028 9.6E-08 58.3 6.7 97 35-136 3-124 (337)
219 2hmt_A YUAA protein; RCK, KTN, 96.7 0.02 6.7E-07 43.9 10.7 126 35-176 6-137 (144)
220 4dib_A GAPDH, glyceraldehyde 3 96.7 0.002 6.7E-08 59.5 5.6 100 34-137 3-123 (345)
221 3oj0_A Glutr, glutamyl-tRNA re 96.6 0.0014 4.9E-08 51.7 4.1 67 35-115 21-89 (144)
222 2ew2_A 2-dehydropantoate 2-red 96.6 0.0052 1.8E-07 53.8 8.1 99 35-142 3-113 (316)
223 2jl1_A Triphenylmethane reduct 96.6 0.0055 1.9E-07 52.8 8.1 120 36-168 1-145 (287)
224 1vl0_A DTDP-4-dehydrorhamnose 96.6 0.0026 8.9E-08 55.1 6.0 85 31-135 8-110 (292)
225 1jw9_B Molybdopterin biosynthe 96.6 0.0051 1.7E-07 53.7 7.8 33 36-70 32-64 (249)
226 2zcu_A Uncharacterized oxidore 96.6 0.0079 2.7E-07 51.7 8.9 118 37-167 1-141 (286)
227 3doc_A Glyceraldehyde 3-phosph 96.5 0.0041 1.4E-07 57.2 6.9 100 35-138 2-124 (335)
228 2i99_A MU-crystallin homolog; 96.5 0.0043 1.5E-07 55.8 6.9 87 35-135 135-224 (312)
229 1dlj_A UDP-glucose dehydrogena 96.5 0.03 1E-06 52.0 12.7 115 36-166 1-143 (402)
230 2rir_A Dipicolinate synthase, 96.5 0.0035 1.2E-07 55.9 6.0 116 35-169 157-274 (300)
231 2b69_A UDP-glucuronate decarbo 96.5 0.0075 2.6E-07 53.6 8.2 44 22-67 15-58 (343)
232 2x4g_A Nucleoside-diphosphate- 96.4 0.013 4.3E-07 51.7 9.2 33 35-68 13-45 (342)
233 3sc6_A DTDP-4-dehydrorhamnose 96.4 0.0029 9.9E-08 54.7 4.9 80 36-135 6-103 (287)
234 2q1s_A Putative nucleotide sug 96.4 0.0068 2.3E-07 54.9 7.5 34 33-67 30-64 (377)
235 2r6j_A Eugenol synthase 1; phe 96.4 0.011 3.9E-07 51.8 8.7 121 36-168 12-160 (318)
236 1np3_A Ketol-acid reductoisome 96.4 0.0099 3.4E-07 54.0 8.6 91 35-141 16-110 (338)
237 3cin_A MYO-inositol-1-phosphat 96.4 0.019 6.7E-07 53.8 10.5 138 33-174 11-230 (394)
238 3c1o_A Eugenol synthase; pheny 96.4 0.0079 2.7E-07 52.8 7.5 127 34-168 3-158 (321)
239 1ks9_A KPA reductase;, 2-dehyd 96.3 0.017 5.9E-07 49.9 9.4 94 36-142 1-102 (291)
240 2pv7_A T-protein [includes: ch 96.3 0.043 1.5E-06 48.6 12.2 89 35-151 21-112 (298)
241 1qyd_A Pinoresinol-lariciresin 96.3 0.012 4.2E-07 51.2 8.4 126 35-168 4-162 (313)
242 3h9e_O Glyceraldehyde-3-phosph 96.3 0.013 4.4E-07 54.1 8.6 100 34-138 6-127 (346)
243 1qyc_A Phenylcoumaran benzylic 96.3 0.012 4.1E-07 51.2 8.0 125 35-168 4-158 (308)
244 3e8x_A Putative NAD-dependent 96.2 0.012 4.2E-07 49.4 7.8 84 35-132 21-124 (236)
245 3ruf_A WBGU; rossmann fold, UD 96.2 0.018 6.1E-07 51.1 9.1 34 34-68 24-57 (351)
246 3llv_A Exopolyphosphatase-rela 96.2 0.0077 2.6E-07 46.9 5.7 125 35-175 6-135 (141)
247 3ids_C GAPDH, glyceraldehyde-3 96.2 0.01 3.6E-07 54.9 7.4 96 35-135 2-133 (359)
248 3ehe_A UDP-glucose 4-epimerase 96.2 0.034 1.2E-06 48.5 10.5 32 35-68 1-32 (313)
249 2tmg_A Protein (glutamate dehy 96.2 0.047 1.6E-06 51.5 12.0 136 36-185 210-362 (415)
250 3d4o_A Dipicolinate synthase s 96.2 0.01 3.5E-07 52.7 7.1 115 35-169 155-272 (293)
251 2gas_A Isoflavone reductase; N 96.1 0.014 4.7E-07 50.7 7.8 93 35-135 2-109 (307)
252 2dpo_A L-gulonate 3-dehydrogen 96.1 0.018 6.2E-07 52.1 8.8 99 35-144 6-130 (319)
253 2bll_A Protein YFBG; decarboxy 96.1 0.042 1.4E-06 48.3 10.9 33 36-68 1-33 (345)
254 1pzg_A LDH, lactate dehydrogen 96.1 0.068 2.3E-06 48.4 12.6 74 33-114 7-86 (331)
255 3rui_A Ubiquitin-like modifier 96.1 0.0078 2.7E-07 55.4 6.3 98 35-140 34-174 (340)
256 2yy7_A L-threonine dehydrogena 96.1 0.015 5.2E-07 50.5 7.9 33 35-67 2-35 (312)
257 1e6u_A GDP-fucose synthetase; 96.1 0.016 5.3E-07 50.7 7.9 81 35-134 3-103 (321)
258 1rpn_A GDP-mannose 4,6-dehydra 96.1 0.021 7.2E-07 50.2 8.7 37 31-68 10-46 (335)
259 3l9w_A Glutathione-regulated p 96.1 0.054 1.8E-06 50.7 11.8 120 35-171 4-130 (413)
260 4id9_A Short-chain dehydrogena 96.0 0.021 7.2E-07 50.5 8.6 89 33-134 17-122 (347)
261 3l4b_C TRKA K+ channel protien 96.0 0.037 1.3E-06 46.4 9.7 144 36-194 1-154 (218)
262 1xq6_A Unknown protein; struct 96.0 0.013 4.3E-07 49.1 6.7 34 34-67 3-37 (253)
263 3i83_A 2-dehydropantoate 2-red 96.0 0.0069 2.4E-07 54.2 5.3 117 35-165 2-129 (320)
264 2yjz_A Metalloreductase steap4 95.0 0.0012 4E-08 55.9 0.0 91 34-141 18-109 (201)
265 1oc2_A DTDP-glucose 4,6-dehydr 96.0 0.02 6.8E-07 50.7 8.0 33 35-67 4-37 (348)
266 4b8w_A GDP-L-fucose synthase; 95.9 0.032 1.1E-06 47.9 9.2 27 33-59 4-30 (319)
267 1mx3_A CTBP1, C-terminal bindi 95.9 0.013 4.4E-07 53.9 6.8 65 35-115 168-232 (347)
268 1zud_1 Adenylyltransferase THI 95.9 0.022 7.4E-07 49.7 7.9 32 36-69 29-60 (251)
269 1vjp_A MYO-inositol-1-phosphat 95.9 0.027 9.2E-07 52.6 8.7 139 34-175 12-231 (394)
270 3gpi_A NAD-dependent epimerase 95.9 0.017 5.7E-07 49.9 7.0 32 35-68 3-34 (286)
271 3hwr_A 2-dehydropantoate 2-red 95.9 0.032 1.1E-06 49.9 9.0 104 34-152 18-133 (318)
272 2q1w_A Putative nucleotide sug 95.8 0.032 1.1E-06 49.4 8.9 33 34-67 20-52 (333)
273 2c5a_A GDP-mannose-3', 5'-epim 95.8 0.041 1.4E-06 49.8 9.7 34 34-68 28-61 (379)
274 1n2s_A DTDP-4-, DTDP-glucose o 95.8 0.0099 3.4E-07 51.5 5.4 82 36-134 1-100 (299)
275 4dgs_A Dehydrogenase; structur 95.8 0.04 1.4E-06 50.5 9.6 60 35-114 171-230 (340)
276 3ba1_A HPPR, hydroxyphenylpyru 95.8 0.032 1.1E-06 50.9 8.9 62 35-116 164-225 (333)
277 2hk9_A Shikimate dehydrogenase 95.8 0.018 6.2E-07 50.6 6.9 70 35-118 129-198 (275)
278 2ydy_A Methionine adenosyltran 95.8 0.023 7.9E-07 49.6 7.6 87 35-134 2-106 (315)
279 2c20_A UDP-glucose 4-epimerase 95.7 0.045 1.5E-06 47.9 9.1 32 35-67 1-32 (330)
280 3enk_A UDP-glucose 4-epimerase 95.7 0.046 1.6E-06 48.1 9.1 32 35-67 5-36 (341)
281 3ius_A Uncharacterized conserv 95.6 0.043 1.5E-06 47.1 8.7 33 34-68 4-36 (286)
282 2x6t_A ADP-L-glycero-D-manno-h 95.6 0.041 1.4E-06 49.0 8.8 98 36-135 47-160 (357)
283 3ko8_A NAD-dependent epimerase 95.6 0.065 2.2E-06 46.5 9.8 31 36-67 1-31 (312)
284 1orr_A CDP-tyvelose-2-epimeras 95.6 0.031 1.1E-06 49.1 7.7 32 35-67 1-32 (347)
285 3hn2_A 2-dehydropantoate 2-red 95.6 0.042 1.4E-06 48.9 8.5 104 35-152 2-116 (312)
286 2w2k_A D-mandelate dehydrogena 95.6 0.019 6.6E-07 52.5 6.4 68 35-116 163-230 (348)
287 3k6j_A Protein F01G10.3, confi 95.5 0.033 1.1E-06 53.2 8.1 38 29-69 48-85 (460)
288 2bka_A CC3, TAT-interacting pr 95.5 0.14 4.7E-06 42.7 11.2 32 35-67 18-51 (242)
289 1sb8_A WBPP; epimerase, 4-epim 95.5 0.068 2.3E-06 47.5 9.7 32 35-67 27-58 (352)
290 3sxp_A ADP-L-glycero-D-mannohe 95.5 0.14 4.6E-06 45.7 11.6 35 34-68 9-44 (362)
291 2pzm_A Putative nucleotide sug 95.4 0.063 2.2E-06 47.4 9.2 34 34-68 19-52 (330)
292 4gsl_A Ubiquitin-like modifier 95.4 0.028 9.7E-07 55.5 7.4 96 35-140 326-466 (615)
293 1zcj_A Peroxisomal bifunctiona 95.4 0.081 2.8E-06 50.1 10.4 34 33-69 35-68 (463)
294 3st7_A Capsular polysaccharide 95.4 0.023 7.9E-07 51.1 6.4 100 36-160 1-126 (369)
295 1x7d_A Ornithine cyclodeaminas 95.4 0.021 7.2E-07 52.4 6.0 92 35-135 129-224 (350)
296 3oh8_A Nucleoside-diphosphate 95.3 0.048 1.6E-06 51.9 8.6 33 35-68 147-179 (516)
297 2rh8_A Anthocyanidin reductase 95.3 0.14 4.8E-06 45.0 11.1 33 35-68 9-41 (338)
298 2d5c_A AROE, shikimate 5-dehyd 95.3 0.0051 1.7E-07 53.6 1.6 107 37-164 118-228 (263)
299 1t2d_A LDH-P, L-lactate dehydr 95.3 0.2 6.9E-06 45.2 12.3 71 34-114 3-80 (322)
300 2bma_A Glutamate dehydrogenase 95.3 0.11 3.8E-06 49.7 11.0 136 35-185 252-415 (470)
301 4h7p_A Malate dehydrogenase; s 95.3 0.12 4.1E-06 47.4 10.9 91 11-113 4-107 (345)
302 3aog_A Glutamate dehydrogenase 95.3 0.07 2.4E-06 50.7 9.4 136 35-185 235-387 (440)
303 1smk_A Malate dehydrogenase, g 95.2 0.067 2.3E-06 48.4 8.8 97 35-138 8-125 (326)
304 1ur5_A Malate dehydrogenase; o 95.2 0.032 1.1E-06 50.0 6.5 71 35-114 2-78 (309)
305 1eq2_A ADP-L-glycero-D-mannohe 95.1 0.075 2.6E-06 45.8 8.6 92 37-135 1-113 (310)
306 2d0i_A Dehydrogenase; structur 95.1 0.02 6.9E-07 52.1 5.1 65 35-116 146-210 (333)
307 1leh_A Leucine dehydrogenase; 95.1 0.015 5.1E-07 53.9 4.2 109 36-166 174-285 (364)
308 1gy8_A UDP-galactose 4-epimera 95.1 0.11 3.7E-06 46.8 9.9 33 35-67 2-34 (397)
309 3hja_A GAPDH, glyceraldehyde-3 95.1 0.021 7.1E-07 52.9 5.1 36 31-68 17-52 (356)
310 1kew_A RMLB;, DTDP-D-glucose 4 95.1 0.16 5.5E-06 44.9 10.9 32 36-67 1-32 (361)
311 2hrz_A AGR_C_4963P, nucleoside 95.1 0.081 2.8E-06 46.6 8.9 33 35-67 14-52 (342)
312 1r6d_A TDP-glucose-4,6-dehydra 95.1 0.23 7.9E-06 43.5 11.7 32 36-67 1-37 (337)
313 1xgk_A Nitrogen metabolite rep 95.1 0.13 4.5E-06 46.4 10.2 115 35-160 5-146 (352)
314 4b4o_A Epimerase family protei 95.0 0.027 9.1E-07 49.0 5.3 32 36-68 1-32 (298)
315 1zej_A HBD-9, 3-hydroxyacyl-CO 95.0 0.095 3.2E-06 46.9 9.1 66 36-114 13-81 (293)
316 2hun_A 336AA long hypothetical 95.0 0.18 6.1E-06 44.1 10.7 33 35-67 3-36 (336)
317 3vtf_A UDP-glucose 6-dehydroge 95.0 0.21 7.3E-06 47.3 11.8 129 28-165 13-176 (444)
318 1ek6_A UDP-galactose 4-epimera 95.0 0.092 3.1E-06 46.3 8.8 32 35-67 2-33 (348)
319 1y8q_A Ubiquitin-like 1 activa 95.0 0.095 3.3E-06 47.9 9.1 91 36-136 37-156 (346)
320 3vh1_A Ubiquitin-like modifier 95.0 0.031 1E-06 55.1 6.1 32 36-69 328-359 (598)
321 2i6t_A Ubiquitin-conjugating e 95.0 0.14 4.9E-06 45.9 10.1 68 34-113 13-84 (303)
322 3h5n_A MCCB protein; ubiquitin 94.9 0.087 3E-06 48.3 8.7 92 36-136 119-240 (353)
323 2ggs_A 273AA long hypothetical 94.9 0.18 6.1E-06 42.7 10.1 30 36-67 1-30 (273)
324 3jtm_A Formate dehydrogenase, 94.8 0.03 1E-06 51.5 5.3 65 35-114 164-228 (351)
325 3ay3_A NAD-dependent epimerase 94.8 0.04 1.4E-06 47.1 5.8 32 35-67 2-33 (267)
326 1v9l_A Glutamate dehydrogenase 94.8 0.12 4E-06 48.9 9.4 135 36-185 211-368 (421)
327 2j6i_A Formate dehydrogenase; 94.8 0.027 9.3E-07 51.9 5.0 68 34-116 163-231 (364)
328 3hhp_A Malate dehydrogenase; M 94.8 0.047 1.6E-06 49.4 6.4 69 36-113 1-76 (312)
329 2gn4_A FLAA1 protein, UDP-GLCN 94.7 0.08 2.7E-06 47.5 7.8 32 36-67 22-54 (344)
330 3vku_A L-LDH, L-lactate dehydr 94.6 0.065 2.2E-06 48.8 7.0 35 34-69 8-42 (326)
331 3rft_A Uronate dehydrogenase; 94.6 0.072 2.5E-06 45.8 7.0 31 35-66 3-33 (267)
332 3g17_A Similar to 2-dehydropan 94.6 0.019 6.3E-07 50.8 3.3 81 35-126 2-82 (294)
333 2v6g_A Progesterone 5-beta-red 94.6 0.089 3E-06 46.6 7.7 32 36-68 2-38 (364)
334 3h8v_A Ubiquitin-like modifier 94.6 0.11 3.8E-06 46.6 8.3 33 35-69 36-68 (292)
335 2gcg_A Glyoxylate reductase/hy 94.6 0.051 1.7E-06 49.2 6.2 65 35-115 155-219 (330)
336 3eag_A UDP-N-acetylmuramate:L- 94.5 0.13 4.4E-06 46.2 8.7 87 35-134 4-94 (326)
337 3aoe_E Glutamate dehydrogenase 94.5 0.19 6.6E-06 47.3 10.1 136 35-186 218-367 (419)
338 1tt5_A APPBP1, amyloid protein 94.5 0.15 5.2E-06 49.4 9.6 95 36-136 33-155 (531)
339 1z7e_A Protein aRNA; rossmann 94.5 0.18 6.3E-06 49.3 10.4 35 34-68 314-348 (660)
340 1omo_A Alanine dehydrogenase; 94.5 0.047 1.6E-06 49.3 5.6 89 35-136 125-216 (322)
341 4g2n_A D-isomer specific 2-hyd 94.4 0.084 2.9E-06 48.4 7.3 63 35-114 173-235 (345)
342 1q0q_A 1-deoxy-D-xylulose 5-ph 94.4 0.54 1.9E-05 44.0 12.7 97 34-135 8-130 (406)
343 3ajr_A NDP-sugar epimerase; L- 94.4 0.11 3.6E-06 45.2 7.7 31 37-67 1-32 (317)
344 3ghy_A Ketopantoate reductase 94.4 0.075 2.6E-06 47.7 6.9 93 35-140 3-107 (335)
345 1id1_A Putative potassium chan 94.4 0.32 1.1E-05 38.1 9.9 121 36-171 4-133 (153)
346 3gqv_A Enoyl reductase; medium 94.3 0.23 7.8E-06 45.1 10.0 31 36-67 166-196 (371)
347 2hjr_A Malate dehydrogenase; m 94.3 0.4 1.4E-05 43.3 11.5 70 35-114 14-90 (328)
348 3ego_A Probable 2-dehydropanto 94.3 0.067 2.3E-06 47.6 6.3 99 35-151 2-111 (307)
349 3mog_A Probable 3-hydroxybutyr 94.3 0.072 2.5E-06 50.9 6.8 32 35-69 5-36 (483)
350 1t2a_A GDP-mannose 4,6 dehydra 94.3 0.13 4.5E-06 46.0 8.2 32 36-68 25-56 (375)
351 1gpj_A Glutamyl-tRNA reductase 94.3 0.059 2E-06 50.1 6.0 90 35-138 167-266 (404)
352 4dqv_A Probable peptide synthe 94.3 0.17 5.8E-06 47.6 9.3 37 32-68 70-108 (478)
353 3gvc_A Oxidoreductase, probabl 94.2 0.14 4.8E-06 44.7 8.0 80 36-139 30-112 (277)
354 3u62_A Shikimate dehydrogenase 94.2 0.068 2.3E-06 46.8 6.0 66 37-115 110-175 (253)
355 3ado_A Lambda-crystallin; L-gu 94.2 0.23 7.8E-06 45.1 9.6 30 37-69 8-37 (319)
356 2pk3_A GDP-6-deoxy-D-LYXO-4-he 94.2 0.14 4.7E-06 44.6 7.9 33 34-67 11-43 (321)
357 1hyh_A L-hicdh, L-2-hydroxyiso 94.2 0.19 6.3E-06 44.7 8.9 72 35-116 1-79 (309)
358 2ekl_A D-3-phosphoglycerate de 94.2 0.059 2E-06 48.5 5.6 64 35-115 142-205 (313)
359 2nac_A NAD-dependent formate d 94.2 0.075 2.6E-06 49.6 6.5 66 35-115 191-256 (393)
360 1qp8_A Formate dehydrogenase; 94.2 0.13 4.3E-06 46.2 7.7 60 34-114 123-182 (303)
361 3v2g_A 3-oxoacyl-[acyl-carrier 94.1 0.64 2.2E-05 40.2 12.1 107 13-139 6-118 (271)
362 3un1_A Probable oxidoreductase 94.1 0.16 5.3E-06 43.8 8.1 74 36-139 29-105 (260)
363 1db3_A GDP-mannose 4,6-dehydra 94.1 0.16 5.5E-06 45.1 8.4 32 35-67 1-32 (372)
364 1mld_A Malate dehydrogenase; o 94.1 0.079 2.7E-06 47.7 6.3 72 36-113 1-75 (314)
365 1rkx_A CDP-glucose-4,6-dehydra 94.1 0.47 1.6E-05 41.9 11.4 33 35-68 9-41 (357)
366 1gdh_A D-glycerate dehydrogena 94.1 0.075 2.6E-06 48.0 6.1 65 35-115 146-211 (320)
367 2b4q_A Rhamnolipids biosynthes 94.0 0.25 8.5E-06 42.9 9.1 82 36-139 30-114 (276)
368 2p5y_A UDP-glucose 4-epimerase 94.0 0.21 7.2E-06 43.3 8.6 30 36-66 1-30 (311)
369 2z1m_A GDP-D-mannose dehydrata 93.9 0.19 6.6E-06 43.8 8.4 32 35-67 3-34 (345)
370 3v8b_A Putative dehydrogenase, 93.8 0.32 1.1E-05 42.4 9.6 83 36-139 29-114 (283)
371 4f6l_B AUSA reductase domain p 93.8 0.09 3.1E-06 49.6 6.3 37 32-69 147-183 (508)
372 2dbq_A Glyoxylate reductase; D 93.8 0.075 2.6E-06 48.2 5.5 66 34-116 149-214 (334)
373 4f6c_A AUSA reductase domain p 93.8 0.22 7.4E-06 45.7 8.7 36 33-69 67-102 (427)
374 2wtb_A MFP2, fatty acid multif 93.7 0.15 5E-06 51.2 8.1 35 32-69 309-343 (725)
375 3gg9_A D-3-phosphoglycerate de 93.7 0.043 1.5E-06 50.4 3.9 64 35-114 160-223 (352)
376 4ea9_A Perosamine N-acetyltran 93.7 0.43 1.5E-05 40.0 9.9 84 34-133 11-98 (220)
377 2c07_A 3-oxoacyl-(acyl-carrier 93.7 0.81 2.8E-05 39.5 12.0 83 36-139 45-130 (285)
378 1b8p_A Protein (malate dehydro 93.7 0.056 1.9E-06 48.8 4.5 97 34-138 4-133 (329)
379 2zqz_A L-LDH, L-lactate dehydr 93.6 0.079 2.7E-06 48.0 5.4 39 30-69 4-42 (326)
380 1wwk_A Phosphoglycerate dehydr 93.6 0.093 3.2E-06 47.1 5.8 64 35-115 142-205 (307)
381 1y8q_B Anthracycline-, ubiquit 93.6 0.35 1.2E-05 48.0 10.2 95 36-140 18-144 (640)
382 1pqw_A Polyketide synthase; ro 93.5 0.12 4.2E-06 42.2 6.0 30 36-66 40-69 (198)
383 3qlj_A Short chain dehydrogena 93.5 0.78 2.7E-05 40.5 11.7 114 13-139 3-123 (322)
384 3gvx_A Glycerate dehydrogenase 93.5 0.098 3.3E-06 46.8 5.7 60 35-114 122-181 (290)
385 3nep_X Malate dehydrogenase; h 93.5 0.069 2.3E-06 48.3 4.7 33 36-69 1-33 (314)
386 1udb_A Epimerase, UDP-galactos 93.4 0.32 1.1E-05 42.6 8.9 30 36-66 1-30 (338)
387 3hdj_A Probable ornithine cycl 93.4 0.14 4.9E-06 46.1 6.7 90 36-137 122-214 (313)
388 1bgv_A Glutamate dehydrogenase 93.4 0.26 8.8E-06 46.9 8.7 125 35-171 230-379 (449)
389 2ewd_A Lactate dehydrogenase,; 93.4 0.39 1.3E-05 42.8 9.5 71 34-114 3-80 (317)
390 2c29_D Dihydroflavonol 4-reduc 93.4 0.37 1.3E-05 42.2 9.3 33 35-68 5-37 (337)
391 1wdk_A Fatty oxidation complex 93.3 0.13 4.5E-06 51.4 6.9 35 32-69 311-345 (715)
392 4e3z_A Putative oxidoreductase 93.3 0.82 2.8E-05 39.1 11.2 83 35-139 26-113 (272)
393 3fi9_A Malate dehydrogenase; s 93.3 0.13 4.5E-06 47.1 6.3 70 35-113 8-83 (343)
394 4aj2_A L-lactate dehydrogenase 93.3 0.37 1.3E-05 43.8 9.3 74 32-113 16-94 (331)
395 2qk4_A Trifunctional purine bi 93.3 0.34 1.2E-05 45.0 9.3 116 35-160 24-144 (452)
396 2y1e_A 1-deoxy-D-xylulose 5-ph 93.3 0.35 1.2E-05 45.1 9.1 93 35-135 21-134 (398)
397 4dvj_A Putative zinc-dependent 93.1 0.24 8.3E-06 44.8 7.9 94 36-137 173-271 (363)
398 3ldh_A Lactate dehydrogenase; 93.0 0.51 1.7E-05 43.0 9.8 72 34-113 20-96 (330)
399 4da9_A Short-chain dehydrogena 93.0 1.2 4E-05 38.6 11.8 85 36-140 30-117 (280)
400 3mjf_A Phosphoribosylamine--gl 93.0 0.17 6E-06 47.1 6.8 115 34-159 2-122 (431)
401 3rih_A Short chain dehydrogena 93.0 0.84 2.9E-05 40.1 10.9 84 36-139 42-128 (293)
402 4g65_A TRK system potassium up 92.9 0.62 2.1E-05 44.0 10.6 164 35-209 3-179 (461)
403 3au8_A 1-deoxy-D-xylulose 5-ph 92.9 1 3.4E-05 43.0 11.8 122 34-160 76-228 (488)
404 3pp8_A Glyoxylate/hydroxypyruv 92.9 0.18 6.2E-06 45.5 6.7 63 35-114 139-201 (315)
405 3hg7_A D-isomer specific 2-hyd 92.9 0.18 6.1E-06 45.8 6.6 63 35-114 140-202 (324)
406 1guz_A Malate dehydrogenase; o 92.9 0.69 2.4E-05 41.1 10.4 70 36-114 1-77 (310)
407 2hcy_A Alcohol dehydrogenase 1 92.9 0.36 1.2E-05 43.2 8.6 31 36-67 171-201 (347)
408 3gvi_A Malate dehydrogenase; N 92.9 0.18 6.2E-06 45.7 6.6 69 35-113 7-82 (324)
409 2cuk_A Glycerate dehydrogenase 92.9 0.28 9.5E-06 44.0 7.7 60 34-115 143-202 (311)
410 1sc6_A PGDH, D-3-phosphoglycer 92.8 0.23 8E-06 46.4 7.4 61 35-114 145-205 (404)
411 2yfq_A Padgh, NAD-GDH, NAD-spe 92.8 0.092 3.1E-06 49.6 4.7 120 35-171 212-354 (421)
412 3d7l_A LIN1944 protein; APC893 92.8 0.12 4E-06 42.1 4.7 32 34-67 2-33 (202)
413 3pqe_A L-LDH, L-lactate dehydr 92.7 0.074 2.5E-06 48.4 3.8 34 34-69 4-38 (326)
414 1hye_A L-lactate/malate dehydr 92.7 0.081 2.8E-06 47.4 3.9 34 36-69 1-34 (313)
415 2ph3_A 3-oxoacyl-[acyl carrier 92.7 0.55 1.9E-05 39.0 8.9 82 36-139 2-89 (245)
416 1dxy_A D-2-hydroxyisocaproate 92.5 0.29 9.9E-06 44.4 7.5 103 35-157 145-252 (333)
417 4hy3_A Phosphoglycerate oxidor 92.5 0.16 5.4E-06 47.0 5.7 63 35-114 176-238 (365)
418 3lp8_A Phosphoribosylamine-gly 92.5 0.19 6.6E-06 47.0 6.3 112 35-159 21-138 (442)
419 4e5n_A Thermostable phosphite 92.4 0.14 4.7E-06 46.6 5.1 64 35-114 145-208 (330)
420 3gaz_A Alcohol dehydrogenase s 92.4 0.12 4.1E-06 46.4 4.7 98 36-139 152-249 (343)
421 2g76_A 3-PGDH, D-3-phosphoglyc 92.4 0.26 8.8E-06 44.9 7.0 64 35-115 165-228 (335)
422 3k92_A NAD-GDH, NAD-specific g 92.4 0.3 1E-05 46.1 7.6 117 35-167 221-350 (424)
423 3sju_A Keto reductase; short-c 92.4 1.5 5E-05 37.9 11.6 82 37-139 26-110 (279)
424 3qwb_A Probable quinone oxidor 92.2 0.21 7E-06 44.5 6.0 95 36-138 150-249 (334)
425 3p7m_A Malate dehydrogenase; p 92.2 0.21 7.2E-06 45.2 6.1 32 35-69 5-37 (321)
426 3l77_A Short-chain alcohol deh 92.2 0.45 1.5E-05 39.7 7.8 85 35-139 2-89 (235)
427 1sny_A Sniffer CG10964-PA; alp 92.2 0.6 2.1E-05 39.5 8.7 84 35-139 21-111 (267)
428 3pi7_A NADH oxidoreductase; gr 92.2 1.2 4.2E-05 39.7 11.1 30 37-67 167-196 (349)
429 1tt5_B Ubiquitin-activating en 92.1 0.7 2.4E-05 43.6 9.8 31 36-68 41-71 (434)
430 2o23_A HADH2 protein; HSD17B10 92.1 1.4 4.9E-05 37.0 11.0 80 36-139 13-95 (265)
431 1ygy_A PGDH, D-3-phosphoglycer 92.0 0.077 2.6E-06 51.2 3.1 67 34-117 141-207 (529)
432 2aef_A Calcium-gated potassium 92.0 0.57 2E-05 39.3 8.3 153 35-207 9-177 (234)
433 1oju_A MDH, malate dehydrogena 92.0 0.082 2.8E-06 47.3 3.1 69 36-113 1-76 (294)
434 3k5i_A Phosphoribosyl-aminoimi 92.0 0.37 1.3E-05 44.4 7.6 50 9-67 5-54 (403)
435 3don_A Shikimate dehydrogenase 91.9 0.15 5.2E-06 45.2 4.7 67 36-115 118-184 (277)
436 1qor_A Quinone oxidoreductase; 91.9 0.18 6.3E-06 44.6 5.3 31 36-67 142-172 (327)
437 2p4h_X Vestitone reductase; NA 91.9 0.44 1.5E-05 41.2 7.6 31 36-67 2-32 (322)
438 1xg5_A ARPG836; short chain de 91.9 2.1 7.1E-05 36.6 11.8 85 36-139 33-120 (279)
439 3orf_A Dihydropteridine reduct 91.9 0.81 2.8E-05 38.8 9.1 33 33-66 20-52 (251)
440 3lk7_A UDP-N-acetylmuramoylala 91.8 1.3 4.6E-05 41.3 11.3 139 35-191 9-168 (451)
441 2pi1_A D-lactate dehydrogenase 91.8 0.22 7.4E-06 45.3 5.6 62 35-114 141-202 (334)
442 1yb1_A 17-beta-hydroxysteroid 91.7 1.5 5E-05 37.5 10.7 83 36-139 32-117 (272)
443 1z45_A GAL10 bifunctional prot 91.7 0.62 2.1E-05 45.7 9.3 32 35-67 11-42 (699)
444 1c1d_A L-phenylalanine dehydro 91.7 0.21 7.3E-06 46.0 5.5 109 35-166 175-286 (355)
445 1j4a_A D-LDH, D-lactate dehydr 91.7 0.21 7E-06 45.3 5.3 63 35-115 146-208 (333)
446 2bgk_A Rhizome secoisolaricire 91.6 0.84 2.9E-05 38.7 9.0 82 36-139 17-101 (278)
447 1ldn_A L-lactate dehydrogenase 91.6 0.29 1E-05 43.8 6.2 34 35-70 6-40 (316)
448 1wly_A CAAR, 2-haloacrylate re 91.5 0.23 7.8E-06 44.1 5.4 31 36-67 147-177 (333)
449 3ip1_A Alcohol dehydrogenase, 91.4 0.53 1.8E-05 43.2 7.9 30 36-68 215-245 (404)
450 3i4f_A 3-oxoacyl-[acyl-carrier 91.4 1.4 4.6E-05 37.3 10.0 85 35-139 7-94 (264)
451 3u5t_A 3-oxoacyl-[acyl-carrier 91.3 0.99 3.4E-05 38.8 9.2 81 37-139 29-114 (267)
452 1ez4_A Lactate dehydrogenase; 91.3 0.15 5E-06 46.0 4.0 34 35-69 5-38 (318)
453 3evt_A Phosphoglycerate dehydr 91.3 0.25 8.6E-06 44.8 5.5 63 35-114 137-199 (324)
454 3vps_A TUNA, NAD-dependent epi 91.3 0.19 6.6E-06 43.3 4.6 34 34-68 6-39 (321)
455 1yo6_A Putative carbonyl reduc 91.3 0.77 2.6E-05 38.0 8.2 80 36-139 4-90 (250)
456 3cxt_A Dehydrogenase with diff 91.2 1.9 6.4E-05 37.6 11.1 83 36-139 35-120 (291)
457 3kvo_A Hydroxysteroid dehydrog 91.1 3.8 0.00013 36.8 13.3 88 36-139 46-138 (346)
458 4b7c_A Probable oxidoreductase 91.0 0.42 1.4E-05 42.4 6.6 31 36-67 151-181 (336)
459 1v3u_A Leukotriene B4 12- hydr 91.0 0.4 1.4E-05 42.5 6.5 94 36-138 147-246 (333)
460 2v6b_A L-LDH, L-lactate dehydr 90.9 0.64 2.2E-05 41.3 7.7 31 36-69 1-33 (304)
461 2rhc_B Actinorhodin polyketide 90.9 3.3 0.00011 35.5 12.2 83 36-139 23-108 (277)
462 3gms_A Putative NADPH:quinone 90.9 0.58 2E-05 41.7 7.4 97 36-138 146-245 (340)
463 4eye_A Probable oxidoreductase 90.8 0.49 1.7E-05 42.3 7.0 32 36-68 161-192 (342)
464 1y6j_A L-lactate dehydrogenase 90.8 0.47 1.6E-05 42.6 6.8 33 35-69 7-40 (318)
465 3ftp_A 3-oxoacyl-[acyl-carrier 90.8 1 3.5E-05 38.8 8.8 83 36-139 29-114 (270)
466 1uls_A Putative 3-oxoacyl-acyl 90.8 2 7E-05 36.1 10.5 78 36-139 6-86 (245)
467 2dtx_A Glucose 1-dehydrogenase 90.8 3 0.0001 35.5 11.7 30 36-66 9-38 (264)
468 2ehd_A Oxidoreductase, oxidore 90.7 1.6 5.4E-05 36.1 9.7 79 36-139 6-87 (234)
469 3tjr_A Short chain dehydrogena 90.7 2.8 9.6E-05 36.5 11.7 83 36-139 32-117 (301)
470 3gem_A Short chain dehydrogena 90.7 0.66 2.2E-05 39.8 7.4 77 37-139 29-108 (260)
471 1wma_A Carbonyl reductase [NAD 90.7 1.6 5.4E-05 36.5 9.7 33 35-67 4-36 (276)
472 3l6e_A Oxidoreductase, short-c 90.7 0.74 2.5E-05 38.7 7.6 82 35-140 3-87 (235)
473 3d0o_A L-LDH 1, L-lactate dehy 90.7 0.19 6.4E-06 45.2 4.0 34 35-69 6-39 (317)
474 2j3h_A NADP-dependent oxidored 90.6 0.28 9.5E-06 43.7 5.1 31 36-67 157-187 (345)
475 3qiv_A Short-chain dehydrogena 90.6 3.1 0.00011 34.8 11.5 84 36-140 10-96 (253)
476 3oid_A Enoyl-[acyl-carrier-pro 90.6 2.9 9.9E-05 35.5 11.4 82 36-139 5-91 (258)
477 1yxm_A Pecra, peroxisomal tran 90.6 1.7 5.8E-05 37.5 10.1 30 36-66 19-48 (303)
478 3dfz_A SIRC, precorrin-2 dehyd 90.5 0.55 1.9E-05 40.4 6.7 86 36-134 32-119 (223)
479 4fc7_A Peroxisomal 2,4-dienoyl 90.5 4.3 0.00015 34.8 12.5 84 36-139 28-114 (277)
480 4fcc_A Glutamate dehydrogenase 90.5 1.4 4.9E-05 41.8 10.0 138 35-186 235-398 (450)
481 3jyn_A Quinone oxidoreductase; 90.5 0.22 7.5E-06 44.2 4.2 97 36-138 142-241 (325)
482 4iiu_A 3-oxoacyl-[acyl-carrier 90.5 2.7 9.3E-05 35.6 11.2 84 36-139 27-113 (267)
483 4dyv_A Short-chain dehydrogena 90.5 0.45 1.5E-05 41.2 6.2 102 13-139 5-111 (272)
484 4dup_A Quinone oxidoreductase; 90.5 0.43 1.5E-05 42.9 6.2 31 36-67 169-199 (353)
485 3k5p_A D-3-phosphoglycerate de 90.4 0.54 1.9E-05 44.2 7.1 61 35-114 156-216 (416)
486 2eih_A Alcohol dehydrogenase; 90.4 0.26 8.9E-06 44.0 4.7 32 35-67 167-198 (343)
487 3uxy_A Short-chain dehydrogena 90.4 0.97 3.3E-05 38.9 8.2 53 12-65 5-57 (266)
488 1nff_A Putative oxidoreductase 90.4 1.9 6.5E-05 36.7 10.1 80 36-139 8-90 (260)
489 3tqh_A Quinone oxidoreductase; 90.3 0.2 6.9E-06 44.3 3.9 87 36-137 154-246 (321)
490 1uzm_A 3-oxoacyl-[acyl-carrier 90.3 2.5 8.6E-05 35.6 10.7 30 36-66 16-45 (247)
491 1zsy_A Mitochondrial 2-enoyl t 90.3 0.34 1.2E-05 43.6 5.4 95 37-136 170-270 (357)
492 3rkr_A Short chain oxidoreduct 90.3 3.2 0.00011 35.2 11.4 84 36-140 30-116 (262)
493 1ja9_A 4HNR, 1,3,6,8-tetrahydr 90.3 1.9 6.5E-05 36.3 9.9 84 36-139 22-108 (274)
494 2c0c_A Zinc binding alcohol de 90.2 0.56 1.9E-05 42.3 6.8 94 36-138 165-263 (362)
495 3grp_A 3-oxoacyl-(acyl carrier 90.2 0.84 2.9E-05 39.3 7.7 81 36-140 28-111 (266)
496 4iin_A 3-ketoacyl-acyl carrier 90.2 2.8 9.6E-05 35.7 11.0 84 36-139 30-116 (271)
497 1xdw_A NAD+-dependent (R)-2-hy 90.2 0.58 2E-05 42.3 6.8 61 35-114 146-206 (331)
498 1yb5_A Quinone oxidoreductase; 90.1 0.85 2.9E-05 41.0 7.9 31 36-67 172-202 (351)
499 2yq5_A D-isomer specific 2-hyd 90.1 0.52 1.8E-05 43.1 6.5 61 35-114 148-208 (343)
500 1zk4_A R-specific alcohol dehy 90.0 1.7 5.7E-05 36.2 9.3 82 36-139 7-91 (251)
No 1
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=100.00 E-value=2.2e-61 Score=439.14 Aligned_cols=211 Identities=15% Similarity=0.198 Sum_probs=193.5
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecC---CCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEE
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH---SVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVV 110 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~---~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVv 110 (257)
.|+||+|+||+||||+.+++++.++++++|+|++|+. ..|+|+++++|.+ +.|+++++|++++++ ++||+
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~-~~gv~v~~dl~~ll~------~aDVv 92 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSD-FLGVRITDDPESAFS------NTEGI 92 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCS-CCSCBCBSCHHHHTT------SCSEE
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccC-cCCceeeCCHHHHhc------CCCEE
Confidence 5799999999999999999999999999999999953 4689999999885 789999999999985 79999
Q ss_pred EEcCChHhHHHHHHHHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCchHHHHHHHHHHHHhcC---CCCCeE
Q 025154 111 IDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASF---HYKNVE 187 (257)
Q Consensus 111 IDFT~p~~~~~~~~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfSlGvnll~~~a~~l~~---~~~DiE 187 (257)
||||+|+++.+++.+|+++|+|+|+|||||++++.++|+++|++ +|+|||||||+||||+.++++.+++ .+||+|
T Consensus 93 IDFT~p~a~~~~~~~~l~~Gv~vViGTTG~~~e~~~~L~~aa~~--~~~~~a~N~SiGv~ll~~l~~~aa~~l~~~~die 170 (288)
T 3ijp_A 93 LDFSQPQASVLYANYAAQKSLIHIIGTTGFSKTEEAQIADFAKY--TTIVKSGNMSLGVNLLANLVKRAAKALDDDFDIE 170 (288)
T ss_dssp EECSCHHHHHHHHHHHHHHTCEEEECCCCCCHHHHHHHHHHHTT--SEEEECSCCCHHHHHHHHHHHHHHHHSCTTSEEE
T ss_pred EEcCCHHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHhCc--CCEEEECCCcHHHHHHHHHHHHHHHhcCCCCCEE
Confidence 99999999999999999999999999999999999999999998 9999999999999997776555443 468999
Q ss_pred EEeccCCCCCCCCCccHHHHHH---------------hhhccccCCCCCCCceeeeeecCCccee----eccCCcEEEEE
Q 025154 188 IVESRPNARVRYMTRTLISMQV---------------CLRHIYLYPKFQNNNSFHTKRKLKIASS----IIGVGEILILS 248 (257)
Q Consensus 188 IiE~HH~~K~DapSGTa~~l~~---------------~~r~g~~~~r~~~~Igi~s~R~G~IvG~----f~g~~E~iel~ 248 (257)
|+|+||++|+|||||||++++. |.|+|..++|.+++|+|||+|+|+|||+ |.|+||+|||+
T Consensus 171 IiE~HH~~K~DaPSGTA~~la~~i~~~~~~~~~~~~~~~r~g~~g~r~~~~i~i~s~R~g~ivg~h~V~f~~~~e~i~i~ 250 (288)
T 3ijp_A 171 IYEMHHANKVDSPSGTALLLGQAAAEGRNIMLKNVSVNGRSGHTGKREKGTIGFACSRGGTVIGDHSITFAGENERIVLS 250 (288)
T ss_dssp EEEEECTTCCCSSCHHHHHHHHHHHHHTTSCHHHHEEECGGGCCSCCCTTCEEEEEEECTTCCEEEEEEEEETTEEEEEE
T ss_pred EEEccCCCCCCCCCHHHHHHHHHHHHHhCCCcccccccccccccCCcCCCCccEEEEECCCCCEEEEEEecCCCcEEEEE
Confidence 9999999999999999999963 4678888999999999999999999999 99999999999
Q ss_pred eecCC
Q 025154 249 KILPS 253 (257)
Q Consensus 249 h~~~~ 253 (257)
|.--|
T Consensus 251 H~a~s 255 (288)
T 3ijp_A 251 HIAQE 255 (288)
T ss_dssp EEECC
T ss_pred EEeCc
Confidence 98654
No 2
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=100.00 E-value=1.5e-60 Score=430.89 Aligned_cols=209 Identities=21% Similarity=0.261 Sum_probs=191.8
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecC---CCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH---SVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVI 111 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~---~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvI 111 (257)
||||+|+||+|+||+.+++.+.++++++|++++|+. ..|+|+++++|.. + ++++++|++++++ ++||||
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~-~-gv~v~~dl~~ll~------~~DVVI 78 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQ-T-GVALTDDIERVCA------EADYLI 78 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCC-C-SCBCBCCHHHHHH------HCSEEE
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCC-C-CceecCCHHHHhc------CCCEEE
Confidence 699999999999999999999999999999999954 4689999998874 4 9999999999996 699999
Q ss_pred EcCChHhHHHHHHHHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCchHHHHHHHHHHHHhcC---CCCCeEE
Q 025154 112 DFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASF---HYKNVEI 188 (257)
Q Consensus 112 DFT~p~~~~~~~~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfSlGvnll~~~a~~l~~---~~~DiEI 188 (257)
|||+|+++.+++..|+++|+|+|+|||||++++.++|+++|++ +|+|||||||+||||+.++++.+++ .+||+||
T Consensus 79 DfT~p~a~~~~~~~al~~G~~vVigTTG~s~~~~~~L~~aa~~--~~vv~a~N~s~Gv~l~~~~~~~aa~~l~~~~diei 156 (272)
T 4f3y_A 79 DFTLPEGTLVHLDAALRHDVKLVIGTTGFSEPQKAQLRAAGEK--IALVFSANMSVGVNVTMKLLEFAAKQFAQGYDIEI 156 (272)
T ss_dssp ECSCHHHHHHHHHHHHHHTCEEEECCCCCCHHHHHHHHHHTTT--SEEEECSCCCHHHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred EcCCHHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHhcc--CCEEEECCCCHHHHHHHHHHHHHHHhcCcCCCEEE
Confidence 9999999999999999999999999999999999999999998 9999999999999997777655544 4689999
Q ss_pred EeccCCCCCCCCCccHHHHHH---------------hhhccccCCCCCCCceeeeeecCCccee----eccCCcEEEEEe
Q 025154 189 VESRPNARVRYMTRTLISMQV---------------CLRHIYLYPKFQNNNSFHTKRKLKIASS----IIGVGEILILSK 249 (257)
Q Consensus 189 iE~HH~~K~DapSGTa~~l~~---------------~~r~g~~~~r~~~~Igi~s~R~G~IvG~----f~g~~E~iel~h 249 (257)
+|+||++|+|||||||++++. |.|+|..++|.+++|+|||+|+|+|||+ |.++||+|||+|
T Consensus 157 ~E~HH~~K~DaPSGTA~~la~~i~~~~~~~~~~~~~~~r~g~~g~r~~~~i~i~s~R~g~ivg~h~v~f~~~~e~i~i~H 236 (272)
T 4f3y_A 157 IEAHHRHKVDAPSGTALMMGETIAAATGRSLDDCAVYGRHGVTGERDPSTIGFSAIRGGDIVGDHTVLFAGIGERIEITH 236 (272)
T ss_dssp EEEECTTCCSSSCHHHHHHHHHHHHTTTCCHHHHEEECCCSCCCSCCTTCEEEEEEECTTCCEEEEEEEECSSEEEEEEE
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHHHhCcccccccccccccccCCCCCCccCEEEEECCCCceEEEEEEcCCCcEEEEEE
Confidence 999999999999999999953 4578888999999999999999999999 999999999999
Q ss_pred ecCC
Q 025154 250 ILPS 253 (257)
Q Consensus 250 ~~~~ 253 (257)
.--|
T Consensus 237 ~a~~ 240 (272)
T 4f3y_A 237 KSAS 240 (272)
T ss_dssp EECC
T ss_pred EeCc
Confidence 8654
No 3
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=100.00 E-value=4.3e-58 Score=408.70 Aligned_cols=195 Identities=17% Similarity=0.224 Sum_probs=176.4
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
||||+|+|+ ||||+.+++.+.+.++ +|++++|+... .+.++++++|+++++ ++||+||||
T Consensus 3 MmkI~ViGa-GrMG~~i~~~l~~~~~-eLva~~d~~~~-----------~~~gv~v~~dl~~l~-------~~DVvIDft 62 (243)
T 3qy9_A 3 SMKILLIGY-GAMNQRVARLAEEKGH-EIVGVIENTPK-----------ATTPYQQYQHIADVK-------GADVAIDFS 62 (243)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTC-EEEEEECSSCC-------------CCSCBCSCTTTCT-------TCSEEEECS
T ss_pred ceEEEEECc-CHHHHHHHHHHHhCCC-EEEEEEecCcc-----------ccCCCceeCCHHHHh-------CCCEEEEeC
Confidence 799999998 9999999999999999 99999996521 145788999998876 489999999
Q ss_pred ChHhHHHHHHHHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCchHHHHHHHHHHHHhcCCC--CCeEEEecc
Q 025154 115 DASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHY--KNVEIVESR 192 (257)
Q Consensus 115 ~p~~~~~~~~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfSlGvnll~~~a~~l~~~~--~DiEIiE~H 192 (257)
.|+.+.++++ +++|+|+|+|||||++++.++|+++|++ +|+|||||||+||||+.++++.+++++ ||+||+|+|
T Consensus 63 ~p~a~~~~~~--l~~g~~vVigTTG~s~e~~~~l~~aa~~--~~v~~a~N~S~Gv~l~~~~~~~aa~~l~~~dieI~E~H 138 (243)
T 3qy9_A 63 NPNLLFPLLD--EDFHLPLVVATTGEKEKLLNKLDELSQN--MPVFFSANMSYGVHALTKILAAAVPLLDDFDIELTEAH 138 (243)
T ss_dssp CHHHHHHHHT--SCCCCCEEECCCSSHHHHHHHHHHHTTT--SEEEECSSCCHHHHHHHHHHHHHHHHTTTSEEEEEEEE
T ss_pred ChHHHHHHHH--HhcCCceEeCCCCCCHHHHHHHHHHHhc--CCEEEECCccHHHHHHHHHHHHHHHhcCCCCEEEEEcC
Confidence 9999999998 8999999999999999999999999999 999999999999999888877766644 999999999
Q ss_pred CCCCCCCCCccHHHHHH------------hhhccccCCCCCCCceeeeeecCCccee----eccCCcEEEEEeecCC
Q 025154 193 PNARVRYMTRTLISMQV------------CLRHIYLYPKFQNNNSFHTKRKLKIASS----IIGVGEILILSKILPS 253 (257)
Q Consensus 193 H~~K~DapSGTa~~l~~------------~~r~g~~~~r~~~~Igi~s~R~G~IvG~----f~g~~E~iel~h~~~~ 253 (257)
|++|+|||||||++++. |+|+|..++|+.++|||||+|+|+|||+ |+|+||+|||+|.--|
T Consensus 139 H~~K~DaPSGTA~~la~~i~~~~~~~~~~~~r~~~~~~r~~~~i~i~s~R~g~ivg~h~v~f~~~~e~i~i~H~a~s 215 (243)
T 3qy9_A 139 HNKKVDAPSGTLEKLYDVIVSLKENVTPVYDRHELNEKRQPQDIGIHSIRGGTIVGEHEVLFAGTDETIQITHRAQS 215 (243)
T ss_dssp CTTCCSSSCHHHHHHHHHHHHHSTTCEEECCCTTTCCCCCTTEEEEEEEECTTCCEEEEEEEEETTEEEEEEEEESC
T ss_pred CCCCCCCCCHHHHHHHHHHHhcCcccccccccccccCCccCCcceEEEEECCCCcEEEEEEEcCCCcEEEEEEEeCc
Confidence 99999999999999964 3567777899999999999999999999 9999999999998654
No 4
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=100.00 E-value=5.1e-56 Score=401.08 Aligned_cols=211 Identities=22% Similarity=0.286 Sum_probs=188.5
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecC---CCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEE
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH---SVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVV 110 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~---~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVv 110 (257)
.+|||+|+|++|+||+.+++.+.+.++++|++++|+. ..|++++++++.. +.++++++|++++++ .+|||
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~-~~~v~~~~dl~~~l~------~~DvV 76 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAG-KTGVTVQSSLDAVKD------DFDVF 76 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSS-CCSCCEESCSTTTTT------SCSEE
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCC-cCCceecCCHHHHhc------CCCEE
Confidence 3589999999999999999999989999999999954 2377888887764 678999999998885 69999
Q ss_pred EEcCChHhHHHHHHHHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCchHHHHHHHHHHHHhcC---CCCCeE
Q 025154 111 IDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASF---HYKNVE 187 (257)
Q Consensus 111 IDFT~p~~~~~~~~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfSlGvnll~~~a~~l~~---~~~DiE 187 (257)
||||+|+.+.+++.+|+++|+|+|+|||||++++.++|++++++ +|++|+||||+|+|++.++++.+++ .+||||
T Consensus 77 IDft~p~~~~~~~~~a~~~G~~vVigTtG~~~e~~~~L~~~a~~--~~vv~a~N~siGvn~~~~l~~~aa~~~~~~~die 154 (273)
T 1dih_A 77 IDFTRPEGTLNHLAFCRQHGKGMVIGTTGFDEAGKQAIRDAAAD--IAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIE 154 (273)
T ss_dssp EECSCHHHHHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHTTT--SCEEECSCCCHHHHHHHHHHHHHHHHHTTTSEEE
T ss_pred EEcCChHHHHHHHHHHHhCCCCEEEECCCCCHHHHHHHHHhcCC--CCEEEEecCcHHHHHHHHHHHHHHHhcCCCCCEE
Confidence 99999999999999999999999999999999999999999988 8999999999999986665444433 469999
Q ss_pred EEeccCCCCCCCCCccHHHHHH---------------hhhccccCCCCCCCceeeeeecCCccee----eccCCcEEEEE
Q 025154 188 IVESRPNARVRYMTRTLISMQV---------------CLRHIYLYPKFQNNNSFHTKRKLKIASS----IIGVGEILILS 248 (257)
Q Consensus 188 IiE~HH~~K~DapSGTa~~l~~---------------~~r~g~~~~r~~~~Igi~s~R~G~IvG~----f~g~~E~iel~ 248 (257)
|+|+||++|+|+|||||++++. +.|+|+.++|++++|+|||+|+|+|+|+ |+++||+|||+
T Consensus 155 iiE~Hh~~K~DaPSGTA~~~ae~i~~~~~~~~~~~~~~~r~~~~~~r~~~~i~i~s~R~g~vvg~h~v~f~~~ge~i~i~ 234 (273)
T 1dih_A 155 IIEAHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGEHTAMFADIGERLEIT 234 (273)
T ss_dssp EEEEECTTCCSSSCHHHHHHHHHHHHHTTCCGGGTEECCCCSCCCSCCTTCEEEEEEECTTCCEEEEEEEEETTEEEEEE
T ss_pred EEEeecCCCCCCCCHHHHHHHHHHHHhhCCCccccccccccCccCCCCCCcceEEEEeCCCCCccEEEEEcCCCcEEEEE
Confidence 9999999999999999999963 3477888899999999999999999999 99999999999
Q ss_pred eecCC
Q 025154 249 KILPS 253 (257)
Q Consensus 249 h~~~~ 253 (257)
|.--|
T Consensus 235 H~a~~ 239 (273)
T 1dih_A 235 HKASS 239 (273)
T ss_dssp EEECS
T ss_pred EEeCC
Confidence 98654
No 5
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=100.00 E-value=6.9e-55 Score=383.08 Aligned_cols=178 Identities=20% Similarity=0.224 Sum_probs=158.6
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
-||.+|+|++|||||.+++. .++++++|++++|+.. + ++ ++ ++||+||||
T Consensus 12 ~~~~~v~Ga~GrMG~~i~~~-~~~~~~elv~~id~~~---~----------------~~----l~------~~DVvIDFT 61 (228)
T 1vm6_A 12 HMKYGIVGYSGRMGQEIQKV-FSEKGHELVLKVDVNG---V----------------EE----LD------SPDVVIDFS 61 (228)
T ss_dssp CCEEEEETTTSHHHHHHHHH-HHHTTCEEEEEEETTE---E----------------EE----CS------CCSEEEECS
T ss_pred cceeEEEEecCHHHHHHHHH-HhCCCCEEEEEEcCCC---c----------------cc----cc------CCCEEEECC
Confidence 47999999999999999885 4789999999999631 0 01 12 589999999
Q ss_pred ChHhHHHHHHHHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCchHHHHHHHHHHHHhcC--CCCCeEEEecc
Q 025154 115 DASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASF--HYKNVEIVESR 192 (257)
Q Consensus 115 ~p~~~~~~~~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfSlGvnll~~~a~~l~~--~~~DiEIiE~H 192 (257)
+|+++++++++|+++|+|+|+|||||+++|.+.|++++++ +|+|||||||+||||+.++++.+++ ++|||||+|+|
T Consensus 62 ~P~a~~~~~~~~~~~g~~~ViGTTG~~~~~~~~l~~~a~~--~~vv~apNfSlGvnll~~l~~~aA~~l~~ydiEIiE~H 139 (228)
T 1vm6_A 62 SPEALPKTVDLCKKYRAGLVLGTTALKEEHLQMLRELSKE--VPVVQAYNFSIGINVLKRFLSELVKVLEDWDVEIVETH 139 (228)
T ss_dssp CGGGHHHHHHHHHHHTCEEEECCCSCCHHHHHHHHHHTTT--SEEEECSCCCHHHHHHHHHHHHHHHHTTTSEEEEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHHhh--CCEEEeccccHHHHHHHHHHHHHHHhcCCCCEEEEEcC
Confidence 9999999999999999999999999999999999999988 9999999999999998777666554 36899999999
Q ss_pred CCCCCCCCCccHHHHHHhhhccccCCCCCCCceeeeeecCCccee----eccCCcEEEEEeecCC
Q 025154 193 PNARVRYMTRTLISMQVCLRHIYLYPKFQNNNSFHTKRKLKIASS----IIGVGEILILSKILPS 253 (257)
Q Consensus 193 H~~K~DapSGTa~~l~~~~r~g~~~~r~~~~Igi~s~R~G~IvG~----f~g~~E~iel~h~~~~ 253 (257)
|++|+|||||||++++... +++|+|||+|+|+|||+ |.++||+|||+|.--|
T Consensus 140 H~~K~DAPSGTAl~lae~i---------~~~I~i~svR~g~ivg~H~V~F~~~gE~iei~H~a~s 195 (228)
T 1vm6_A 140 HRFKKDAPSGTAILLESAL---------GKSVPIHSLRVGGVPGDHVVVFGNIGETIEIKHRAIS 195 (228)
T ss_dssp CTTCCCSSCHHHHHHHHHT---------TSCCCEEEEECTTCCCEEEEEEECSSEEEEEEEEECC
T ss_pred CCCCCCCCCHHHHHHHHhc---------ccCCCEEEEECCCCcEEEEEEEeCCCcEEEEEEEeCc
Confidence 9999999999999999764 36899999999999999 9999999999998654
No 6
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=100.00 E-value=1.3e-54 Score=386.77 Aligned_cols=192 Identities=20% Similarity=0.257 Sum_probs=170.7
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcCC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT~ 115 (257)
|||+|+||+||||+.+++.+.+.++++|++++|+. +|+++++. .++||+||||+
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~---------------------~dl~~~~~-----~~~DvvIDfT~ 54 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG---------------------DPLSLLTD-----GNTEVVIDFTH 54 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT---------------------CCTHHHHH-----TTCCEEEECSC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC---------------------CCHHHHhc-----cCCcEEEEccC
Confidence 69999999999999999999888999999999852 23455554 37999999999
Q ss_pred hHhHHHHHHHHHHcCCCeEEeCCCCCHHHHHHHHHHhhhc-CceEEEccCchHHHHHHHHHHHHhcCCCCCeEEEeccCC
Q 025154 116 ASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKA-SMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPN 194 (257)
Q Consensus 116 p~~~~~~~~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~-gipvl~spNfSlGvnll~~~a~~l~~~~~DiEIiE~HH~ 194 (257)
|+++.+++.+|+++|+|+|+|||||++++.++|+++|+++ ++|++|+||||+|+|++.++++.++++++||||+|+||+
T Consensus 55 p~a~~~~~~~a~~~g~~~VigTTG~~~e~~~~l~~aa~~~~~~~vv~a~N~siGv~ll~~l~~~aa~~~~dieIiE~HH~ 134 (245)
T 1p9l_A 55 PDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHP 134 (245)
T ss_dssp TTTHHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHHTSTTCEEEECSCCCHHHHHHHHHHHHHGGGCSEEEEEEEECT
T ss_pred hHHHHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHHHHHhCCCCCEEEECCccHHHHHHHHHHHHHHhhcCCEEEEECccc
Confidence 9999999999999999999999999999999999999965 799999999999999999999999887789999999999
Q ss_pred CCCCCCCccHHHHHHhh--------------hccccCCCCC--CCceeeeeecCCccee----eccCCcEEEEEeecCC
Q 025154 195 ARVRYMTRTLISMQVCL--------------RHIYLYPKFQ--NNNSFHTKRKLKIASS----IIGVGEILILSKILPS 253 (257)
Q Consensus 195 ~K~DapSGTa~~l~~~~--------------r~g~~~~r~~--~~Igi~s~R~G~IvG~----f~g~~E~iel~h~~~~ 253 (257)
+|+|||||||+++++.. |++..+.|.. ++|+|||+|+|+|||+ |+|+||+|||+|.--|
T Consensus 135 ~K~DaPSGTA~~lae~i~~~~~~~~~~~~~~~~~~~g~r~~~~~~i~i~s~R~g~ivg~h~V~f~~~~e~i~i~H~a~s 213 (245)
T 1p9l_A 135 HKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLD 213 (245)
T ss_dssp TCCSSSCHHHHHHHHHHHHHTTTSCCCCCCCCSCCTTTTCEEETTEEEEEEECTTCCEEEEEEEEETTEEEEEEEEECS
T ss_pred CCCCCCCHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCcceEEEEECCCCCeEEEEEEcCCCcEEEEEEEeCc
Confidence 99999999999997422 3333455543 6999999999999999 9999999999998654
No 7
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=99.70 E-value=1.2e-16 Score=144.73 Aligned_cols=120 Identities=16% Similarity=0.193 Sum_probs=102.9
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEc
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDF 113 (257)
..+||+|+|++|+||+.+++.+.+. ++++++.+++...|.. ..|+++|++++++.++ ..+|++|+|
T Consensus 6 ~~~~VaVvGasG~~G~~~~~~l~~~-g~~~v~~VnP~~~g~~---------i~G~~vy~sl~el~~~----~~~Dv~Ii~ 71 (288)
T 1oi7_A 6 RETRVLVQGITGREGQFHTKQMLTY-GTKIVAGVTPGKGGME---------VLGVPVYDTVKEAVAH----HEVDASIIF 71 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTCTTCE---------ETTEEEESSHHHHHHH----SCCSEEEEC
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHc-CCeEEEEECCCCCCce---------ECCEEeeCCHHHHhhc----CCCCEEEEe
Confidence 3579999999999999999988765 8999988887532221 2589999999999853 379999999
Q ss_pred CChHhHHHHHHHHHHcCCC-eEEeCCCCCHHHHHHHHHHhhhcCceEEEccCchHHH
Q 025154 114 TDASTVYDNVKQATAFGMR-SVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGS 169 (257)
Q Consensus 114 T~p~~~~~~~~~a~~~Gi~-vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfSlGv 169 (257)
++|+.+.+.++.|+++|++ +|+.|+||++++.++|.++|++.|+. ++.|| ++|+
T Consensus 72 vp~~~~~~~~~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~a~~~gi~-vigPN-c~Gi 126 (288)
T 1oi7_A 72 VPAPAAADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKALGSR-LIGGN-CPGI 126 (288)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTCE-EEESS-SCEE
T ss_pred cCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCE-EEeCC-CCeE
Confidence 9999999999999999999 78899999998889999999997774 78899 7777
No 8
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=99.70 E-value=1.4e-17 Score=152.32 Aligned_cols=154 Identities=13% Similarity=0.064 Sum_probs=121.7
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
+|||+|+|+ |+||+.+++.+.+.++++|++++|+.... .+ ..++++++|+++++. ++||||++|
T Consensus 3 ~irV~IiG~-G~mG~~~~~~l~~~~~~elvav~d~~~~~----~~-----~~gv~~~~d~~~ll~------~~DvViiat 66 (320)
T 1f06_A 3 NIRVAIVGY-GNLGRSVEKLIAKQPDMDLVGIFSRRATL----DT-----KTPVFDVADVDKHAD------DVDVLFLCM 66 (320)
T ss_dssp CEEEEEECC-SHHHHHHHHHHTTCSSEEEEEEEESSSCC----SS-----SSCEEEGGGGGGTTT------TCSEEEECS
T ss_pred CCEEEEEee-cHHHHHHHHHHhcCCCCEEEEEEcCCHHH----hh-----cCCCceeCCHHHHhc------CCCEEEEcC
Confidence 689999995 99999999999888899999999964211 11 146778889988873 799999999
Q ss_pred ChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHH-HHHHHHhhhcCceEEEccCchHHHHHHHHHHHH-hcCCC----CCeE
Q 025154 115 DASTVYDNVKQATAFGMRSVVYVP-HIQLETV-SALSAFCDKASMGCLIAPTLSIGSILLQQAAIS-ASFHY----KNVE 187 (257)
Q Consensus 115 ~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~-~~L~~~a~~~gipvl~spNfSlGvnll~~~a~~-l~~~~----~DiE 187 (257)
.|..+.+++..|+++|+++|++++ +.+.++. ++|.++|++++.-.++..||+.|++.+.++... +.... +..+
T Consensus 67 p~~~h~~~~~~al~aG~~Vv~ekp~~~~~~~~~~~l~~~a~~~~~v~v~~~~~~p~~~~l~~~l~~~~~~~g~~~~~~~~ 146 (320)
T 1f06_A 67 GSATDIPEQAPKFAQFACTVDTYDNHRDIPRHRQVMNEAATAAGNVALVSTGWDPGMFSINRVYAAAVLAEHQQHTFWGP 146 (320)
T ss_dssp CTTTHHHHHHHHHTTTSEEECCCCCGGGHHHHHHHHHHHHHHHTCEEECSCSBTTBHHHHHHHHHHHHCSSEEEEEEECS
T ss_pred CcHHHHHHHHHHHHCCCEEEECCCCcCCHHHHHHHHHHHHHhCCCEEEEecCChHHHHHHHHHHhhccccccceecccCC
Confidence 999999999999999999999998 5677777 889999998774445555999999876666543 22122 1336
Q ss_pred EEeccCCCCCCCCCccH
Q 025154 188 IVESRPNARVRYMTRTL 204 (257)
Q Consensus 188 IiE~HH~~K~DapSGTa 204 (257)
..|.||..+++.++|++
T Consensus 147 ~~~~~~~~~~~~~~gi~ 163 (320)
T 1f06_A 147 GLSQGHSDALRRIPGVQ 163 (320)
T ss_dssp EECHHHHHHHHTSTTCS
T ss_pred CcccccccchhhcCchh
Confidence 67899999998877753
No 9
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=99.68 E-value=3e-16 Score=142.72 Aligned_cols=119 Identities=20% Similarity=0.310 Sum_probs=101.3
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCC-ccEEEEc
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKA-RAVVIDF 113 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~-~DVvIDF 113 (257)
..||+|+|++||||+.+++.+.+. ++++++.+++...|.. ..|+++|++++++.++ .. +|++|+|
T Consensus 13 ~~~vvV~Gasg~~G~~~~~~l~~~-g~~~v~~VnP~~~g~~---------i~G~~vy~sl~el~~~----~~~~DvaIi~ 78 (297)
T 2yv2_A 13 ETRVLVQGITGREGSFHAKAMLEY-GTKVVAGVTPGKGGSE---------VHGVPVYDSVKEALAE----HPEINTSIVF 78 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTCTTCE---------ETTEEEESSHHHHHHH----CTTCCEEEEC
T ss_pred CCEEEEECCCCCHHHHHHHHHHhC-CCcEEEEeCCCCCCce---------ECCEeeeCCHHHHhhc----CCCCCEEEEe
Confidence 458999999999999999988765 8888888886432221 2589999999999852 24 9999999
Q ss_pred CChHhHHHHHHHHHHcCCC-eEEeCCCCCHHHHHHHHHHhhhcCceEEEccCchHHH
Q 025154 114 TDASTVYDNVKQATAFGMR-SVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGS 169 (257)
Q Consensus 114 T~p~~~~~~~~~a~~~Gi~-vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfSlGv 169 (257)
++|+.+.+.++.|+++|++ +|+.|+||++++.++|.++|++.|+. ++.|| ++|+
T Consensus 79 vp~~~~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~-viGPN-c~Gi 133 (297)
T 2yv2_A 79 VPAPFAPDAVYEAVDAGIRLVVVITEGIPVHDTMRFVNYARQKGAT-IIGPN-CPGA 133 (297)
T ss_dssp CCGGGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCE-EECSS-SCEE
T ss_pred cCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCE-EEcCC-CCee
Confidence 9999999999999999999 88889999998889999999997774 78899 7776
No 10
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=99.67 E-value=3.5e-16 Score=142.09 Aligned_cols=119 Identities=19% Similarity=0.333 Sum_probs=101.5
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
..||+|+|++|+||+.+++.+.+ .++++++.+++...|++ -.|+++|++++++.++ .++|++|+|+
T Consensus 13 ~~~v~V~Gasg~~G~~~~~~l~~-~g~~~V~~VnP~~~g~~---------i~G~~vy~sl~el~~~----~~~Dv~ii~v 78 (294)
T 2yv1_A 13 NTKAIVQGITGRQGSFHTKKMLE-CGTKIVGGVTPGKGGQN---------VHGVPVFDTVKEAVKE----TDANASVIFV 78 (294)
T ss_dssp TCCEEEETTTSHHHHHHHHHHHH-TTCCEEEEECTTCTTCE---------ETTEEEESSHHHHHHH----HCCCEEEECC
T ss_pred CCEEEEECCCCCHHHHHHHHHHh-CCCeEEEEeCCCCCCce---------ECCEeeeCCHHHHhhc----CCCCEEEEcc
Confidence 45899999999999999998876 48888888886432221 2579999999999853 2799999999
Q ss_pred ChHhHHHHHHHHHHcCCC-eEEeCCCCCHHHHHHHHHHhhhcCceEEEccCchHHH
Q 025154 115 DASTVYDNVKQATAFGMR-SVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGS 169 (257)
Q Consensus 115 ~p~~~~~~~~~a~~~Gi~-vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfSlGv 169 (257)
+|+.+.+.++.|+++|++ +|+.|+||++++.++|.++|++.|+. ++.|| ++|+
T Consensus 79 p~~~~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~-viGPN-c~Gi 132 (294)
T 2yv1_A 79 PAPFAKDAVFEAIDAGIELIVVITEHIPVHDTMEFVNYAEDVGVK-IIGPN-TPGI 132 (294)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTCE-EECSS-CCEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCE-EEcCC-Ccee
Confidence 999999999999999999 78889999998889999999998774 78899 7787
No 11
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=99.67 E-value=9.4e-16 Score=138.74 Aligned_cols=120 Identities=18% Similarity=0.279 Sum_probs=102.0
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEc
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDF 113 (257)
.++||+|+|++|+||+.+++.+.+. ++++++.+++...|.+ ..|+++|+|++++.++ ..+|++|+|
T Consensus 6 ~~~rVaViG~sG~~G~~~~~~l~~~-g~~~V~~V~p~~~g~~---------~~G~~vy~sl~el~~~----~~~D~viI~ 71 (288)
T 2nu8_A 6 KNTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGKGGTT---------HLGLPVFNTVREAVAA----TGATASVIY 71 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTCTTCE---------ETTEEEESSHHHHHHH----HCCCEEEEC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-CCeEEEEeCCCcccce---------eCCeeccCCHHHHhhc----CCCCEEEEe
Confidence 4589999999999999999998865 7899999987532221 3579999999999853 379999999
Q ss_pred CChHhHHHHHHHHHHcCCCe-EEeCCCCCHHHHHHHHHHhhhcCceEEEccCchHHH
Q 025154 114 TDASTVYDNVKQATAFGMRS-VVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGS 169 (257)
Q Consensus 114 T~p~~~~~~~~~a~~~Gi~v-ViGTTG~s~e~~~~L~~~a~~~gipvl~spNfSlGv 169 (257)
++|+.+.+.++.|+++|+++ |+.|+|++.++.++|.++|++.|+. ++.|| ++|+
T Consensus 72 tP~~~~~~~~~ea~~~Gi~~iVi~t~G~~~~~~~~l~~~A~~~gv~-liGPN-c~Gi 126 (288)
T 2nu8_A 72 VPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVR-MIGPN-TPGV 126 (288)
T ss_dssp CCGGGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCE-EECSS-CCEE
T ss_pred cCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCE-EEecC-Ccce
Confidence 99999999999999999996 6778899998888999999998885 58999 5565
No 12
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=99.65 E-value=4.1e-16 Score=142.54 Aligned_cols=149 Identities=16% Similarity=0.095 Sum_probs=114.5
Q ss_pred CCCCceEEEEcCCChHHHH-HHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCee-eecCHHHHHhccccCCCccE
Q 025154 32 PQSNIKVIINGAVKEIGRA-AVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIP-VMSDLTMVLGSISQSKARAV 109 (257)
Q Consensus 32 ~~~~ikV~V~Ga~GrMG~~-i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~-v~~dl~~~l~~~~~~~~~DV 109 (257)
.++||||||+|+ |+||+. ++..+...++++|+|++|+.. ..+.+++ ++++++ +|+|+++++++ .++|+
T Consensus 20 ~~~mirigiIG~-G~ig~~~~~~~~~~~~~~~lvav~d~~~--~~a~~~a---~~~g~~~~y~d~~ell~~----~~iDa 89 (350)
T 4had_A 20 FQSMLRFGIIST-AKIGRDNVVPAIQDAENCVVTAIASRDL--TRAREMA---DRFSVPHAFGSYEEMLAS----DVIDA 89 (350)
T ss_dssp --CCEEEEEESC-CHHHHHTHHHHHHHCSSEEEEEEECSSH--HHHHHHH---HHHTCSEEESSHHHHHHC----SSCSE
T ss_pred ccCccEEEEEcC-hHHHHHHHHHHHHhCCCeEEEEEECCCH--HHHHHHH---HHcCCCeeeCCHHHHhcC----CCCCE
Confidence 378999999995 999986 577888889999999999641 1223333 245664 79999999975 67999
Q ss_pred EEEcCChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccCchH--HHHHHHHHHHHhcCCCCCe
Q 025154 110 VIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTLSI--GSILLQQAAISASFHYKNV 186 (257)
Q Consensus 110 vIDFT~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spNfSl--Gvnll~~~a~~l~~~~~Di 186 (257)
|+..|++..+.+.+..|+++|+||+|++| ..+.++.++|.++|+++|+.+.+..|+-. .+..++++.+. +..-++
T Consensus 90 V~I~tP~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~~~~l~v~~~~R~~p~~~~~k~~i~~--G~iG~i 167 (350)
T 4had_A 90 VYIPLPTSQHIEWSIKAADAGKHVVCEKPLALKAGDIDAVIAARDRNKVVVTEAYMITYSPVWQKVRSLIDE--GAIGSL 167 (350)
T ss_dssp EEECSCGGGHHHHHHHHHHTTCEEEECSCCCSSGGGGHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHHHT--TTTSSE
T ss_pred EEEeCCCchhHHHHHHHHhcCCEEEEeCCcccchhhHHHHHHHHHHcCCceeEeeeeecCHHHHHhhHhhhc--CCCCcc
Confidence 99999999999999999999999999999 78889999999999999999998877544 33334444421 123355
Q ss_pred EEEecc
Q 025154 187 EIVESR 192 (257)
Q Consensus 187 EIiE~H 192 (257)
..++.+
T Consensus 168 ~~i~~~ 173 (350)
T 4had_A 168 RHVQGA 173 (350)
T ss_dssp EEEEEE
T ss_pred eeeeEE
Confidence 555543
No 13
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=99.59 E-value=6.5e-15 Score=128.42 Aligned_cols=144 Identities=15% Similarity=0.168 Sum_probs=115.6
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcCC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT~ 115 (257)
|||+|+|+ |+||+.+++.+. .++++|++++|+.. .. .. +++|++++++ .++|+||+++.
T Consensus 1 m~vgiIG~-G~mG~~~~~~l~-~~g~~lv~v~d~~~---~~-------~~----~~~~~~~l~~-----~~~DvVv~~~~ 59 (236)
T 2dc1_A 1 MLVGLIGY-GAIGKFLAEWLE-RNGFEIAAILDVRG---EH-------EK----MVRGIDEFLQ-----REMDVAVEAAS 59 (236)
T ss_dssp CEEEEECC-SHHHHHHHHHHH-HTTCEEEEEECSSC---CC-------TT----EESSHHHHTT-----SCCSEEEECSC
T ss_pred CEEEEECC-CHHHHHHHHHHh-cCCCEEEEEEecCc---ch-------hh----hcCCHHHHhc-----CCCCEEEECCC
Confidence 69999995 999999999887 68999999998642 11 01 6789999884 37999999999
Q ss_pred hHhHHHHHHHHHHcCCCeEEeCCCCC-HHHH-HHHHHHhhhcCceEEEccCchHHHHHHHHHHHHhcCCCCCeEEEeccC
Q 025154 116 ASTVYDNVKQATAFGMRSVVYVPHIQ-LETV-SALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRP 193 (257)
Q Consensus 116 p~~~~~~~~~a~~~Gi~vViGTTG~s-~e~~-~~L~~~a~~~gipvl~spNfSlGvnll~~~a~~l~~~~~DiEIiE~HH 193 (257)
++.+.+++..++++|+++|+.+|+.. .++. ++|.++++++|+.+++.+|++-|+..+.... + ....+.+.+.+|
T Consensus 60 ~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~~~i~~~~~g~~~~~~~~~--~--~~~~~~~~~~~~ 135 (236)
T 2dc1_A 60 QQAVKDYAEKILKAGIDLIVLSTGAFADRDFLSRVREVCRKTGRRVYIASGAIGGLDAIFSAS--E--LIEEIVLTTRKN 135 (236)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHCCCEEECCTTCSCHHHHHHTG--G--GEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCcEEEECcccCChHHHHHHHHHHHHhcCCeEEecCccccChHHHHHhh--c--cccEEEEEEEcC
Confidence 99999999999999999999999763 3444 7899999999999999999999987654221 2 234567778888
Q ss_pred CCCCCCC----CccH
Q 025154 194 NARVRYM----TRTL 204 (257)
Q Consensus 194 ~~K~Dap----SGTa 204 (257)
..+.+.+ .|++
T Consensus 136 ~~~~~~~~~~~~G~~ 150 (236)
T 2dc1_A 136 WRQFGRKGVIFEGSA 150 (236)
T ss_dssp GGGTTSCEEEEEEEH
T ss_pred hHHcCcceEEEeccH
Confidence 8888776 4555
No 14
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=99.59 E-value=6.6e-14 Score=128.56 Aligned_cols=147 Identities=22% Similarity=0.221 Sum_probs=116.4
Q ss_pred CCCCceEEEEcCCChHHHH-HHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEE
Q 025154 32 PQSNIKVIINGAVKEIGRA-AVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVV 110 (257)
Q Consensus 32 ~~~~ikV~V~Ga~GrMG~~-i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVv 110 (257)
+..|+||+|+|+ |+||+. +++.+...++++|++++|+.. ..+.. ...++++|+|+++++++ .++|+|
T Consensus 4 M~~~~rvgiiG~-G~~g~~~~~~~~~~~~~~~l~av~d~~~--~~~~~-----~~~~~~~~~~~~~ll~~----~~vD~V 71 (352)
T 3kux_A 4 MADKIKVGLLGY-GYASKTFHAPLIMGTPGLELAGVSSSDA--SKVHA-----DWPAIPVVSDPQMLFND----PSIDLI 71 (352)
T ss_dssp TTCCEEEEEECC-SHHHHHTHHHHHHTSTTEEEEEEECSCH--HHHHT-----TCSSCCEESCHHHHHHC----SSCCEE
T ss_pred ccCCceEEEECC-CHHHHHHHHHHHhhCCCcEEEEEECCCH--HHHHh-----hCCCCceECCHHHHhcC----CCCCEE
Confidence 445799999995 999996 899888889999999999641 11111 12467889999999974 579999
Q ss_pred EEcCChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccCc--hHHHHHHHHHHHHhcCCCCCeE
Q 025154 111 IDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTL--SIGSILLQQAAISASFHYKNVE 187 (257)
Q Consensus 111 IDFT~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spNf--SlGvnll~~~a~~l~~~~~DiE 187 (257)
+.+|.+..+.+.+..|+++|+||++++| ..+.++.++|.++|+++|+.+.++.|+ .-.+.-++++.+. +..-++.
T Consensus 72 ~i~tp~~~H~~~~~~al~aGkhV~~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~--g~iG~i~ 149 (352)
T 3kux_A 72 VIPTPNDTHFPLAQSALAAGKHVVVDKPFTVTLSQANALKEHADDAGLLLSVFHNRRWDSDFLTLKTLLAE--GSLGNVV 149 (352)
T ss_dssp EECSCTTTHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHH--TTTCSEE
T ss_pred EEeCChHHHHHHHHHHHHCCCcEEEECCCcCCHHHHHHHHHHHHHcCCeEEEEeecccCHHHHHHHHHHhc--CCCCceE
Confidence 9999999999999999999999999999 899999999999999999988887774 4444445555432 2344666
Q ss_pred EEecc
Q 025154 188 IVESR 192 (257)
Q Consensus 188 IiE~H 192 (257)
-++.+
T Consensus 150 ~~~~~ 154 (352)
T 3kux_A 150 YFESH 154 (352)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66654
No 15
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=99.59 E-value=1e-14 Score=133.72 Aligned_cols=145 Identities=9% Similarity=0.008 Sum_probs=111.0
Q ss_pred CceEEEEcCCChHHHHHHHHHHh-------cCCcEEEEEEecCCCCcchhhhhcCCCCCCe-eeecCHHHHHhccccCCC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTK-------ARGMEVAGAIDSHSVGEDIGMVCDMEQPLEI-PVMSDLTMVLGSISQSKA 106 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~-------~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv-~v~~dl~~~l~~~~~~~~ 106 (257)
++||||+|+ |+||+.+++.+.. .++++|+|++|+.. ..+.+++ +++++ .+|+|+++++++ .+
T Consensus 25 kirvgiIG~-G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~--~~a~~~a---~~~g~~~~y~d~~ell~~----~~ 94 (393)
T 4fb5_A 25 PLGIGLIGT-GYMGKCHALAWNAVKTVFGDVERPRLVHLAEANA--GLAEARA---GEFGFEKATADWRALIAD----PE 94 (393)
T ss_dssp CCEEEEECC-SHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC----TTHHHHH---HHHTCSEEESCHHHHHHC----TT
T ss_pred CccEEEEcC-CHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCH--HHHHHHH---HHhCCCeecCCHHHHhcC----CC
Confidence 589999995 9999999886643 36889999999642 1222333 24566 479999999975 68
Q ss_pred ccEEEEcCChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccCchHH--HHHHHHHHHHhcCCC
Q 025154 107 RAVVIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTLSIG--SILLQQAAISASFHY 183 (257)
Q Consensus 107 ~DVvIDFT~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spNfSlG--vnll~~~a~~l~~~~ 183 (257)
+|+|+..|++..+.+.+..|+++|+||+|++| ..+.+|.++|.++|+++|+.+.+.-|+-.- +.-++++.+. +..
T Consensus 95 iDaV~IatP~~~H~~~a~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~vg~~~R~~p~~~~~k~~i~~--G~i 172 (393)
T 4fb5_A 95 VDVVSVTTPNQFHAEMAIAALEAGKHVWCEKPMAPAYADAERMLATAERSGKVAALGYNYIQNPVMRHIRKLVGD--GVI 172 (393)
T ss_dssp CCEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHSSSCEEECCGGGGCHHHHHHHHHHHT--TTT
T ss_pred CcEEEECCChHHHHHHHHHHHhcCCeEEEccCCcccHHHHHHhhhhHHhcCCccccccccccChHHHHHHHHHHc--CCC
Confidence 99999999999999999999999999999999 889999999999999999999988886543 3234444322 234
Q ss_pred CCeEEEec
Q 025154 184 KNVEIVES 191 (257)
Q Consensus 184 ~DiEIiE~ 191 (257)
-++..++.
T Consensus 173 G~i~~v~~ 180 (393)
T 4fb5_A 173 GRVNHVRV 180 (393)
T ss_dssp CSEEEEEE
T ss_pred ccccceee
Confidence 46655553
No 16
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=99.58 E-value=1.7e-14 Score=132.00 Aligned_cols=117 Identities=15% Similarity=0.184 Sum_probs=103.3
Q ss_pred CceEEEEcCCChHHH-HHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEc
Q 025154 35 NIKVIINGAVKEIGR-AAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~-~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDF 113 (257)
|+||+|+|+ |+||+ .+++.+...++++|++++|+.. +..++++|+|+++++++ ..++|+|+.+
T Consensus 25 ~~rvgiiG~-G~ig~~~~~~~l~~~~~~~lvav~d~~~------------~~~g~~~~~~~~~ll~~---~~~vD~V~i~ 88 (330)
T 4ew6_A 25 PINLAIVGV-GKIVRDQHLPSIAKNANFKLVATASRHG------------TVEGVNSYTTIEAMLDA---EPSIDAVSLC 88 (330)
T ss_dssp CEEEEEECC-SHHHHHTHHHHHHHCTTEEEEEEECSSC------------CCTTSEEESSHHHHHHH---CTTCCEEEEC
T ss_pred CceEEEEec-CHHHHHHHHHHHHhCCCeEEEEEEeCCh------------hhcCCCccCCHHHHHhC---CCCCCEEEEe
Confidence 699999995 99999 7999999999999999998642 13578899999999962 0369999999
Q ss_pred CChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccCchH
Q 025154 114 TDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTLSI 167 (257)
Q Consensus 114 T~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spNfSl 167 (257)
|.+..+.+.+..|+++|++|+++++ +.+.++.++|.++|+++|+.++++.|+-.
T Consensus 89 tp~~~H~~~~~~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~ 143 (330)
T 4ew6_A 89 MPPQYRYEAAYKALVAGKHVFLEKPPGATLSEVADLEALANKQGASLFASWHSRY 143 (330)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGG
T ss_pred CCcHHHHHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHHHhcCCeEEEEehhhc
Confidence 9999999999999999999999999 78999999999999999999988877654
No 17
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=99.58 E-value=9.5e-15 Score=134.48 Aligned_cols=146 Identities=11% Similarity=0.002 Sum_probs=114.9
Q ss_pred CceEEEEcCCChHHH-HHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEc
Q 025154 35 NIKVIINGAVKEIGR-AAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~-~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDF 113 (257)
++||+|+|+ |+||+ .+++.+...++++|++++|+.. ..+..++ +..+++.++|+++++++ .++|+|+.+
T Consensus 27 ~~rigiIG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~--~~~~~~a---~~~g~~~~~~~~~ll~~----~~~D~V~i~ 96 (350)
T 3rc1_A 27 PIRVGVIGC-ADIAWRRALPALEAEPLTEVTAIASRRW--DRAKRFT---ERFGGEPVEGYPALLER----DDVDAVYVP 96 (350)
T ss_dssp CEEEEEESC-CHHHHHTHHHHHHHCTTEEEEEEEESSH--HHHHHHH---HHHCSEEEESHHHHHTC----TTCSEEEEC
T ss_pred ceEEEEEcC-cHHHHHHHHHHHHhCCCeEEEEEEcCCH--HHHHHHH---HHcCCCCcCCHHHHhcC----CCCCEEEEC
Confidence 589999995 99998 7899998889999999999641 1222333 24578888999999964 579999999
Q ss_pred CChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccCc--hHHHHHHHHHHHHhcCCCCCeEEEe
Q 025154 114 TDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTL--SIGSILLQQAAISASFHYKNVEIVE 190 (257)
Q Consensus 114 T~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spNf--SlGvnll~~~a~~l~~~~~DiEIiE 190 (257)
|.+..+.+.+..|+++|++|+++++ +.+.++.++|.++|+++|+.++++.|+ .-.+..++++.+. +..-++..++
T Consensus 97 tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~--G~iG~i~~v~ 174 (350)
T 3rc1_A 97 LPAVLHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARERGLLLMENFMFLHHPQHRQVADMLDE--GVIGEIRSFA 174 (350)
T ss_dssp CCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEECGGGGCTHHHHHHHHHHT--TTTCSEEEEE
T ss_pred CCcHHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEecccCCHHHHHHHHHHhc--CCCCCeEEEE
Confidence 9999999999999999999999999 889999999999999999988877664 3444445555431 1234666555
Q ss_pred cc
Q 025154 191 SR 192 (257)
Q Consensus 191 ~H 192 (257)
.+
T Consensus 175 ~~ 176 (350)
T 3rc1_A 175 AS 176 (350)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 18
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=99.58 E-value=2.4e-14 Score=132.09 Aligned_cols=150 Identities=16% Similarity=0.076 Sum_probs=116.2
Q ss_pred CCceEEEEcCCChHHHHHHHHHH-hcCCcEEEEEEecCCCCcchhhhhcCCCCCC--eeeecCHHHHHhccccCCCccEE
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVT-KARGMEVAGAIDSHSVGEDIGMVCDMEQPLE--IPVMSDLTMVLGSISQSKARAVV 110 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~-~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~g--v~v~~dl~~~l~~~~~~~~~DVv 110 (257)
.++||+|+|+ |.||+.+++.+. ..++++|++++|+.. ..+..++ ..++ +.+|+|+++++++ .++|+|
T Consensus 22 ~~~rvgiIG~-G~~g~~~~~~l~~~~~~~~lvav~d~~~--~~~~~~a---~~~g~~~~~~~~~~~ll~~----~~~D~V 91 (357)
T 3ec7_A 22 MTLKAGIVGI-GMIGSDHLRRLANTVSGVEVVAVCDIVA--GRAQAAL---DKYAIEAKDYNDYHDLIND----KDVEVV 91 (357)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHHTCTTEEEEEEECSST--THHHHHH---HHHTCCCEEESSHHHHHHC----TTCCEE
T ss_pred CeeeEEEECC-cHHHHHHHHHHHhhCCCcEEEEEEeCCH--HHHHHHH---HHhCCCCeeeCCHHHHhcC----CCCCEE
Confidence 3689999995 999999999998 679999999999642 1222222 1334 6789999999974 579999
Q ss_pred EEcCChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceE-EEccC--chHHHHHHHHHHHHhcCCCCCe
Q 025154 111 IDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGC-LIAPT--LSIGSILLQQAAISASFHYKNV 186 (257)
Q Consensus 111 IDFT~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipv-l~spN--fSlGvnll~~~a~~l~~~~~Di 186 (257)
+..|.+..+.+.+..|+++|++|++.++ ..+.++.++|.++|+++|+.+ .++.| |.-.+..++++.+. +..-++
T Consensus 92 ~i~tp~~~h~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~~v~~~~R~~p~~~~~k~~i~~--g~iG~i 169 (357)
T 3ec7_A 92 IITASNEAHADVAVAALNANKYVFCEKPLAVTAADCQRVIEAEQKNGKRMVQIGFMRRYDKGYVQLKNIIDS--GEIGQP 169 (357)
T ss_dssp EECSCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHTSCCEEEECGGGGSHHHHHHHHHHHH--TTTCSE
T ss_pred EEcCCcHHHHHHHHHHHHCCCCEEeecCccCCHHHHHHHHHHHHHhCCeEEEEeecccCCHHHHHHHHHHhc--CCCCCe
Confidence 9999999999999999999999999999 889999999999999999877 56666 44444445555432 234566
Q ss_pred EEEeccCCC
Q 025154 187 EIVESRPNA 195 (257)
Q Consensus 187 EIiE~HH~~ 195 (257)
..+...++.
T Consensus 170 ~~v~~~~~~ 178 (357)
T 3ec7_A 170 LMVHGRHYN 178 (357)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEeC
Confidence 666655443
No 19
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=99.57 E-value=3e-14 Score=129.69 Aligned_cols=146 Identities=16% Similarity=0.134 Sum_probs=114.6
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCee-eecCHHHHHhccccCCCccEEEE
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIP-VMSDLTMVLGSISQSKARAVVID 112 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~-v~~dl~~~l~~~~~~~~~DVvID 112 (257)
.|+||+|+|+ |+||+.+++.+...++++|++++|+.. ..+..++ ...+++ +|+|+++++++ .++|+|+.
T Consensus 4 ~~~rigiiG~-G~ig~~~~~~l~~~~~~~~~av~d~~~--~~~~~~a---~~~~~~~~~~~~~~ll~~----~~~D~V~i 73 (329)
T 3evn_A 4 SKVRYGVVST-AKVAPRFIEGVRLAGNGEVVAVSSRTL--ESAQAFA---NKYHLPKAYDKLEDMLAD----ESIDVIYV 73 (329)
T ss_dssp -CEEEEEEBC-CTTHHHHHHHHHHHCSEEEEEEECSCS--STTCC------CCCCSCEESCHHHHHTC----TTCCEEEE
T ss_pred CceEEEEEec-hHHHHHHHHHHHhCCCcEEEEEEcCCH--HHHHHHH---HHcCCCcccCCHHHHhcC----CCCCEEEE
Confidence 3689999995 999999999998889999999999642 1112222 256775 79999999974 57999999
Q ss_pred cCChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccCc--hHHHHHHHHHHHHhcCCCCCeEEE
Q 025154 113 FTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTL--SIGSILLQQAAISASFHYKNVEIV 189 (257)
Q Consensus 113 FT~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spNf--SlGvnll~~~a~~l~~~~~DiEIi 189 (257)
+|.+..+.+.+..|+++|++|++.++ ..+.++.++|.++|+++|+.++.+.|+ .-.+..++++.+. +..-++.-+
T Consensus 74 ~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~~~~i~~--g~iG~i~~v 151 (329)
T 3evn_A 74 ATINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCNLFLMEAQKSVFIPMTQVIKKLLAS--GEIGEVISI 151 (329)
T ss_dssp CSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCEEEECSSCSSHHHHHHHHHHHT--TTTCSEEEE
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHHcCCEEEEEEcccCCHHHHHHHHHHhC--CCCCCeEEE
Confidence 99999999999999999999999999 889999999999999999999988876 4555445555431 123455555
Q ss_pred ec
Q 025154 190 ES 191 (257)
Q Consensus 190 E~ 191 (257)
+.
T Consensus 152 ~~ 153 (329)
T 3evn_A 152 SS 153 (329)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 20
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=99.57 E-value=8.5e-14 Score=127.80 Aligned_cols=149 Identities=20% Similarity=0.148 Sum_probs=117.8
Q ss_pred CCceEEEEcCCChHHH-HHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEE
Q 025154 34 SNIKVIINGAVKEIGR-AAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVID 112 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~-~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvID 112 (257)
+|+||+|+|+ |+||+ .++..+...++++|++++|+. ..+...+-.+ ..++++|+|+++++++ .++|+|+.
T Consensus 1 M~~rvgiiG~-G~~g~~~~~~~l~~~~~~~l~av~d~~-~~~~~a~~~~---~~~~~~~~~~~~ll~~----~~~D~V~i 71 (349)
T 3i23_A 1 MTVKMGFIGF-GKSANRYHLPYVMIRETLEVKTIFDLH-VNEKAAAPFK---EKGVNFTADLNELLTD----PEIELITI 71 (349)
T ss_dssp CCEEEEEECC-SHHHHHTTHHHHTTCTTEEEEEEECTT-CCHHHHHHHH---TTTCEEESCTHHHHSC----TTCCEEEE
T ss_pred CeeEEEEEcc-CHHHHHHHHHHHhhCCCeEEEEEECCC-HHHHHHHhhC---CCCCeEECCHHHHhcC----CCCCEEEE
Confidence 3689999995 99998 788888888999999999975 2333322111 1467899999999974 57999999
Q ss_pred cCChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccCc--hHHHHHHHHHHHHhcCCCCCeEEE
Q 025154 113 FTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTL--SIGSILLQQAAISASFHYKNVEIV 189 (257)
Q Consensus 113 FT~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spNf--SlGvnll~~~a~~l~~~~~DiEIi 189 (257)
.|.+..+.+.+..|+++|+||++.++ ..+.++.++|.++|+++|+.+.++.|+ .-.+.-++++.+. +..-++.-+
T Consensus 72 ~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~--g~iG~i~~~ 149 (349)
T 3i23_A 72 CTPAHTHYDLAKQAILAGKSVIVEKPFCDTLEHAEELFALGQEKGVVVMPYQNRRFDGDYLAMKQVVEQ--GFLGEINEV 149 (349)
T ss_dssp CSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHH--TTTCSEEEE
T ss_pred eCCcHHHHHHHHHHHHcCCEEEEECCCcCCHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHHhc--CCCCCEEEE
Confidence 99999999999999999999999999 889999999999999999999988884 4444445555432 234467667
Q ss_pred eccC
Q 025154 190 ESRP 193 (257)
Q Consensus 190 E~HH 193 (257)
+.+.
T Consensus 150 ~~~~ 153 (349)
T 3i23_A 150 ETHI 153 (349)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 7653
No 21
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=99.57 E-value=2.7e-14 Score=130.48 Aligned_cols=150 Identities=13% Similarity=0.134 Sum_probs=118.1
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEc
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDF 113 (257)
.|+||+|+|+ |.||+.+++.+...++++|++++|+.. ..+..++ ...++++++|+++++++ .++|+|+.+
T Consensus 3 ~~~rvgiiG~-G~~g~~~~~~l~~~~~~~l~av~d~~~--~~~~~~a---~~~g~~~~~~~~~~l~~----~~~D~V~i~ 72 (344)
T 3euw_A 3 LTLRIALFGA-GRIGHVHAANIAANPDLELVVIADPFI--EGAQRLA---EANGAEAVASPDEVFAR----DDIDGIVIG 72 (344)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHHCTTEEEEEEECSSH--HHHHHHH---HTTTCEEESSHHHHTTC----SCCCEEEEC
T ss_pred CceEEEEECC-cHHHHHHHHHHHhCCCcEEEEEECCCH--HHHHHHH---HHcCCceeCCHHHHhcC----CCCCEEEEe
Confidence 4789999995 999999999999889999999999641 1222333 24578889999999974 579999999
Q ss_pred CChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccCchHH--HHHHHHHHHHhcCCCCCeEEEe
Q 025154 114 TDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTLSIG--SILLQQAAISASFHYKNVEIVE 190 (257)
Q Consensus 114 T~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spNfSlG--vnll~~~a~~l~~~~~DiEIiE 190 (257)
|.+..+.+.+..|+++|++|++.++ +.+.++.++|.++|+++|+.++++.|+-.- +..++++.+. +..-++..++
T Consensus 73 tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~--g~iG~i~~v~ 150 (344)
T 3euw_A 73 SPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGDGASKVMLGFNRRFDPSFAAINARVAN--QEIGNLEQLV 150 (344)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGGGGGGEEECCGGGGCHHHHHHHHHHHT--TTTSSEEEEE
T ss_pred CCchhhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHhcCCeEEecchhhcCHHHHHHHHHHhc--CCCCceEEEE
Confidence 9999999999999999999999999 899999999999999999988887776442 2234444322 1344676666
Q ss_pred ccCCC
Q 025154 191 SRPNA 195 (257)
Q Consensus 191 ~HH~~ 195 (257)
.+.+.
T Consensus 151 ~~~~~ 155 (344)
T 3euw_A 151 IISRD 155 (344)
T ss_dssp EEEEC
T ss_pred EEecC
Confidence 65544
No 22
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=99.55 E-value=3.6e-14 Score=128.98 Aligned_cols=148 Identities=14% Similarity=0.126 Sum_probs=115.8
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEc
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDF 113 (257)
+|+||+|+|+ |+||+.+++.+...++++|++++|+.. ..+..++ ...+++ ++|+++++++ .++|+|+.+
T Consensus 2 m~~~vgiiG~-G~~g~~~~~~l~~~~~~~l~av~d~~~--~~~~~~~---~~~~~~-~~~~~~~l~~----~~~D~V~i~ 70 (331)
T 4hkt_A 2 MTVRFGLLGA-GRIGKVHAKAVSGNADARLVAVADAFP--AAAEAIA---GAYGCE-VRTIDAIEAA----ADIDAVVIC 70 (331)
T ss_dssp -CEEEEEECC-SHHHHHHHHHHHHCTTEEEEEEECSSH--HHHHHHH---HHTTCE-ECCHHHHHHC----TTCCEEEEC
T ss_pred CceEEEEECC-CHHHHHHHHHHhhCCCcEEEEEECCCH--HHHHHHH---HHhCCC-cCCHHHHhcC----CCCCEEEEe
Confidence 3689999995 999999999999889999999999641 1222333 245778 9999999974 579999999
Q ss_pred CChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccCch--HHHHHHHHHHHHhcCCCCCeEEEe
Q 025154 114 TDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTLS--IGSILLQQAAISASFHYKNVEIVE 190 (257)
Q Consensus 114 T~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spNfS--lGvnll~~~a~~l~~~~~DiEIiE 190 (257)
|.+..+.+.+..|+++|++|++.+| +.+.++.++|.++++++|+.++++.|+- -.+..++++.+. +..-++..++
T Consensus 71 tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~--g~iG~i~~~~ 148 (331)
T 4hkt_A 71 TPTDTHADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSDTKAKLMVGFNRRFDPHFMAVRKAIDD--GRIGEVEMVT 148 (331)
T ss_dssp SCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHT--TTTCSEEEEE
T ss_pred CCchhHHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEcccccCCHHHHHHHHHHHc--CCCCceEEEE
Confidence 9999999999999999999999999 8999999999999999999888877743 333334444422 1234666666
Q ss_pred ccCC
Q 025154 191 SRPN 194 (257)
Q Consensus 191 ~HH~ 194 (257)
.+.+
T Consensus 149 ~~~~ 152 (331)
T 4hkt_A 149 ITSR 152 (331)
T ss_dssp EEEE
T ss_pred EEec
Confidence 5544
No 23
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=99.55 E-value=3.7e-14 Score=129.26 Aligned_cols=147 Identities=14% Similarity=0.079 Sum_probs=115.5
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCe-eeecCHHHHHhccccCCCccEEEE
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEI-PVMSDLTMVLGSISQSKARAVVID 112 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv-~v~~dl~~~l~~~~~~~~~DVvID 112 (257)
.|+||+|+|+ |+||+.+++.+.+.++++|++++|+.. ..+..++ ...++ .+|+|+++++++ .++|+|+.
T Consensus 4 ~~~~igiiG~-G~~g~~~~~~l~~~~~~~l~av~d~~~--~~~~~~~---~~~~~~~~~~~~~~ll~~----~~~D~V~i 73 (330)
T 3e9m_A 4 DKIRYGIMST-AQIVPRFVAGLRESAQAEVRGIASRRL--ENAQKMA---KELAIPVAYGSYEELCKD----ETIDIIYI 73 (330)
T ss_dssp CCEEEEECSC-CTTHHHHHHHHHHSSSEEEEEEBCSSS--HHHHHHH---HHTTCCCCBSSHHHHHHC----TTCSEEEE
T ss_pred CeEEEEEECc-hHHHHHHHHHHHhCCCcEEEEEEeCCH--HHHHHHH---HHcCCCceeCCHHHHhcC----CCCCEEEE
Confidence 3689999995 999999999999889999999998642 2223333 24566 479999999974 57999999
Q ss_pred cCChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccCch--HHHHHHHHHHHHhcCCCCCeEEE
Q 025154 113 FTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTLS--IGSILLQQAAISASFHYKNVEIV 189 (257)
Q Consensus 113 FT~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spNfS--lGvnll~~~a~~l~~~~~DiEIi 189 (257)
+|.+..+.+.+..|+++|++|++.+| +.+.++.++|.++|+++|+.++++.|+- -.+..++++.+. +..-++..+
T Consensus 74 ~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~--g~iG~i~~i 151 (330)
T 3e9m_A 74 PTYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEAQKSVFLPITQKVKATIQE--GGLGEILWV 151 (330)
T ss_dssp CCCGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEECCSGGGCHHHHHHHHHHHT--TTTCSEEEE
T ss_pred cCCCHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEEhhhhCHHHHHHHHHHhC--CCCCCeEEE
Confidence 99999999999999999999999999 8999999999999999999998888854 334335554431 123456555
Q ss_pred ecc
Q 025154 190 ESR 192 (257)
Q Consensus 190 E~H 192 (257)
+.+
T Consensus 152 ~~~ 154 (330)
T 3e9m_A 152 QSV 154 (330)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 24
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=99.54 E-value=2.5e-14 Score=131.28 Aligned_cols=146 Identities=11% Similarity=0.082 Sum_probs=114.4
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEc
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDF 113 (257)
.++||+|+|+ |.||+.+++.+...++++|++++|+.. ..+..++ ...+++.++|+++++++ .++|+|+.+
T Consensus 4 ~~~~vgiiG~-G~~g~~~~~~l~~~~~~~lvav~d~~~--~~~~~~~---~~~g~~~~~~~~~~l~~----~~~D~V~i~ 73 (354)
T 3db2_A 4 NPVGVAAIGL-GRWAYVMADAYTKSEKLKLVTCYSRTE--DKREKFG---KRYNCAGDATMEALLAR----EDVEMVIIT 73 (354)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHTTCSSEEEEEEECSSH--HHHHHHH---HHHTCCCCSSHHHHHHC----SSCCEEEEC
T ss_pred CcceEEEEcc-CHHHHHHHHHHHhCCCcEEEEEECCCH--HHHHHHH---HHcCCCCcCCHHHHhcC----CCCCEEEEe
Confidence 4689999995 999999999998889999999999641 1122222 23577789999999964 579999999
Q ss_pred CChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccCchHHH--HHHHHHHHHhcCCCCCeEEEe
Q 025154 114 TDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTLSIGS--ILLQQAAISASFHYKNVEIVE 190 (257)
Q Consensus 114 T~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spNfSlGv--nll~~~a~~l~~~~~DiEIiE 190 (257)
|.+..+.+.+..|+++|++|++.++ +.+.++.++|.++|+++|+.++++.|+-.-= ..++++.+. +..-++.-++
T Consensus 74 tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~R~~p~~~~~k~~i~~--g~iG~i~~v~ 151 (354)
T 3db2_A 74 VPNDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGHSSRRLGALRKMKEMIDT--KEIGEVSSIE 151 (354)
T ss_dssp SCTTSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEECGGGGSHHHHHHHHHHHT--TTTCCEEEEE
T ss_pred CChHHHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEeechhcCHHHHHHHHHHhc--CCCCCeEEEE
Confidence 9999999999999999999999999 8999999999999999999888877765433 234444321 1234555555
Q ss_pred c
Q 025154 191 S 191 (257)
Q Consensus 191 ~ 191 (257)
.
T Consensus 152 ~ 152 (354)
T 3db2_A 152 A 152 (354)
T ss_dssp E
T ss_pred E
Confidence 3
No 25
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=99.54 E-value=6.5e-14 Score=128.55 Aligned_cols=146 Identities=16% Similarity=0.140 Sum_probs=115.4
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhc-CCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEE
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKA-RGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVID 112 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~-~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvID 112 (257)
.|+||+|+|+ |.||+.+++.+... ++++|++++|+.. ..+..++ ...++++++|+++++++ .++|+|+.
T Consensus 12 ~~~rvgiiG~-G~~g~~~~~~l~~~~~~~~lvav~d~~~--~~~~~~~---~~~~~~~~~~~~~ll~~----~~~D~V~i 81 (354)
T 3q2i_A 12 RKIRFALVGC-GRIANNHFGALEKHADRAELIDVCDIDP--AALKAAV---ERTGARGHASLTDMLAQ----TDADIVIL 81 (354)
T ss_dssp SCEEEEEECC-STTHHHHHHHHHHTTTTEEEEEEECSSH--HHHHHHH---HHHCCEEESCHHHHHHH----CCCSEEEE
T ss_pred CcceEEEEcC-cHHHHHHHHHHHhCCCCeEEEEEEcCCH--HHHHHHH---HHcCCceeCCHHHHhcC----CCCCEEEE
Confidence 5799999995 99999999999887 8999999999641 1122222 24577889999999974 57999999
Q ss_pred cCChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccC--chHHHHHHHHHHHHhcCCCCCeEEE
Q 025154 113 FTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPT--LSIGSILLQQAAISASFHYKNVEIV 189 (257)
Q Consensus 113 FT~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spN--fSlGvnll~~~a~~l~~~~~DiEIi 189 (257)
+|.+..+.+.+..|+++|++|+++++ ..+.++.++|.++++++|+.++++.| |+-.+..++++.+. +..-++..+
T Consensus 82 ~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~--g~iG~i~~v 159 (354)
T 3q2i_A 82 TTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQNRRNATLQLLKRAMQE--KRFGRIYMV 159 (354)
T ss_dssp CSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHHHT--TTTCSEEEE
T ss_pred CCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEEcccCCHHHHHHHHHHhc--CCCCceEEE
Confidence 99999999999999999999999999 88999999999999999999988877 44444445444431 123455555
Q ss_pred ec
Q 025154 190 ES 191 (257)
Q Consensus 190 E~ 191 (257)
+.
T Consensus 160 ~~ 161 (354)
T 3q2i_A 160 NV 161 (354)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 26
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=99.54 E-value=1.1e-13 Score=127.73 Aligned_cols=144 Identities=12% Similarity=0.068 Sum_probs=115.3
Q ss_pred CCceEEEEcCCChHHHH-HHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCC-CeeeecCHHHHHhccccCCCccEEE
Q 025154 34 SNIKVIINGAVKEIGRA-AVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPL-EIPVMSDLTMVLGSISQSKARAVVI 111 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~-i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~-gv~v~~dl~~~l~~~~~~~~~DVvI 111 (257)
.|+||+|+|+ |+||+. ++..+...++++|++++|+.. .+ +. ... ++++|+|+++++++ .++|+|+
T Consensus 4 ~~~rvgiiG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~-~~-~~------~~~~~~~~~~~~~~ll~~----~~vD~V~ 70 (362)
T 3fhl_A 4 EIIKTGLAAF-GMSGQVFHAPFISTNPHFELYKIVERSK-EL-SK------ERYPQASIVRSFKELTED----PEIDLIV 70 (362)
T ss_dssp CCEEEEESCC-SHHHHHTTHHHHHHCTTEEEEEEECSSC-CG-GG------TTCTTSEEESCSHHHHTC----TTCCEEE
T ss_pred CceEEEEECC-CHHHHHHHHHHHhhCCCeEEEEEEcCCH-HH-HH------HhCCCCceECCHHHHhcC----CCCCEEE
Confidence 4689999995 999997 888888889999999999652 11 11 133 67889999999974 5799999
Q ss_pred EcCChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccCc--hHHHHHHHHHHHHhcCCCCCeEE
Q 025154 112 DFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTL--SIGSILLQQAAISASFHYKNVEI 188 (257)
Q Consensus 112 DFT~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spNf--SlGvnll~~~a~~l~~~~~DiEI 188 (257)
.+|.+..+.+.+..|+++|++|++.++ ..+.++.++|.++|+++|+.+.++.|+ .-.+.-++++.+. +..-++.-
T Consensus 71 i~tp~~~H~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~--G~iG~i~~ 148 (362)
T 3fhl_A 71 VNTPDNTHYEYAGMALEAGKNVVVEKPFTSTTKQGEELIALAKKKGLMLSVYQNRRWDADFLTVRDILAK--SLLGRLVE 148 (362)
T ss_dssp ECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGSHHHHHHHHHHHT--TTTSSEEE
T ss_pred EeCChHHHHHHHHHHHHCCCeEEEecCCCCCHHHHHHHHHHHHHcCCEEEEEecceeCHHHHHHHHHHHc--CCCCCeEE
Confidence 999999999999999999999999999 889999999999999999999988884 4455445555432 12345655
Q ss_pred Eecc
Q 025154 189 VESR 192 (257)
Q Consensus 189 iE~H 192 (257)
++.+
T Consensus 149 v~~~ 152 (362)
T 3fhl_A 149 YEST 152 (362)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5554
No 27
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=99.54 E-value=4.6e-14 Score=129.93 Aligned_cols=123 Identities=11% Similarity=0.144 Sum_probs=102.4
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCC----eeeecCHHHHHhccccCCCccE
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLE----IPVMSDLTMVLGSISQSKARAV 109 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~g----v~v~~dl~~~l~~~~~~~~~DV 109 (257)
.||||+|+|+ |+||+.+++.+...++++|++++|+.. ..+..++. ..+ +.+++|+++++++ .++|+
T Consensus 5 ~~~~vgiiG~-G~ig~~~~~~l~~~~~~~lv~v~d~~~--~~~~~~a~---~~~~~~~~~~~~~~~~ll~~----~~~D~ 74 (362)
T 1ydw_A 5 TQIRIGVMGC-ADIARKVSRAIHLAPNATISGVASRSL--EKAKAFAT---ANNYPESTKIHGSYESLLED----PEIDA 74 (362)
T ss_dssp -CEEEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSH--HHHHHHHH---HTTCCTTCEEESSHHHHHHC----TTCCE
T ss_pred CceEEEEECc-hHHHHHHHHHHhhCCCcEEEEEEcCCH--HHHHHHHH---HhCCCCCCeeeCCHHHHhcC----CCCCE
Confidence 4699999995 999999999998889999999999641 11222221 233 5679999999974 47999
Q ss_pred EEEcCChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccCch
Q 025154 110 VIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTLS 166 (257)
Q Consensus 110 vIDFT~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spNfS 166 (257)
|+.+|.+..+.+++..|+++|+||++++| .++.++.++|.++|+++|+.++.+.|+-
T Consensus 75 V~i~tp~~~h~~~~~~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~g~~~~~~~~~r 132 (362)
T 1ydw_A 75 LYVPLPTSLHVEWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGVQIMDGTMWV 132 (362)
T ss_dssp EEECCCGGGHHHHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTCCEEECCCGG
T ss_pred EEEcCChHHHHHHHHHHHHCCCeEEEecCCcCCHHHHHHHHHHHHHcCCEEEEEEeec
Confidence 99999999999999999999999999997 7899999999999999999998877654
No 28
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=99.54 E-value=7.5e-14 Score=128.88 Aligned_cols=145 Identities=15% Similarity=0.164 Sum_probs=115.4
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
++||+|+|+ |.||+.+++.+...++++|++++|+.. +..+.+ ...++++|+|+++++++ .++|+|+.+|
T Consensus 5 ~~~vgiiG~-G~~g~~~~~~l~~~~~~~l~av~d~~~---~~~~~a---~~~g~~~~~~~~~ll~~----~~~D~V~i~t 73 (359)
T 3e18_A 5 KYQLVIVGY-GGMGSYHVTLASAADNLEVHGVFDILA---EKREAA---AQKGLKIYESYEAVLAD----EKVDAVLIAT 73 (359)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHTSTTEEEEEEECSSH---HHHHHH---HTTTCCBCSCHHHHHHC----TTCCEEEECS
T ss_pred cCcEEEECc-CHHHHHHHHHHHhCCCcEEEEEEcCCH---HHHHHH---HhcCCceeCCHHHHhcC----CCCCEEEEcC
Confidence 589999995 999999999999889999999999641 111222 25678899999999974 5799999999
Q ss_pred ChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccCch--HHHHHHHHHHHHhcCCCCCeEEEec
Q 025154 115 DASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTLS--IGSILLQQAAISASFHYKNVEIVES 191 (257)
Q Consensus 115 ~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spNfS--lGvnll~~~a~~l~~~~~DiEIiE~ 191 (257)
.+..+.+.+..|+++|++|++.++ ..+.++.++|.++|+++|+.+.++.|+- -.+..++++.+. +..-++..++.
T Consensus 74 p~~~h~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~--g~iG~i~~~~~ 151 (359)
T 3e18_A 74 PNDSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQNRRWDEDFLIIKEMFEQ--KTIGEMFHLES 151 (359)
T ss_dssp CGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHHH--TTTSSEEEEEE
T ss_pred CcHHHHHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEEeeeccCHHHHHHHHHHHc--CCCCCeEEEEE
Confidence 999999999999999999999998 8899999999999999999888877754 333335544432 23346655554
Q ss_pred c
Q 025154 192 R 192 (257)
Q Consensus 192 H 192 (257)
+
T Consensus 152 ~ 152 (359)
T 3e18_A 152 R 152 (359)
T ss_dssp E
T ss_pred E
Confidence 3
No 29
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=99.53 E-value=3.3e-14 Score=132.37 Aligned_cols=145 Identities=14% Similarity=0.141 Sum_probs=116.0
Q ss_pred CceEEEEcCCC-hHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEc
Q 025154 35 NIKVIINGAVK-EIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (257)
Q Consensus 35 ~ikV~V~Ga~G-rMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDF 113 (257)
||||+|+|+ | .||+.+++.+...++++|++++|+.. ..+.+++ ..+++++|+|+++++++ .++|+|+.+
T Consensus 2 ~~rigiiG~-G~~~~~~~~~~l~~~~~~~l~av~d~~~--~~~~~~a---~~~g~~~~~~~~ell~~----~~vD~V~i~ 71 (387)
T 3moi_A 2 KIRFGICGL-GFAGSVLMAPAMRHHPDAQIVAACDPNE--DVRERFG---KEYGIPVFATLAEMMQH----VQMDAVYIA 71 (387)
T ss_dssp CEEEEEECC-SHHHHTTHHHHHHHCTTEEEEEEECSCH--HHHHHHH---HHHTCCEESSHHHHHHH----SCCSEEEEC
T ss_pred ceEEEEEeC-CHHHHHHHHHHHHhCCCeEEEEEEeCCH--HHHHHHH---HHcCCCeECCHHHHHcC----CCCCEEEEc
Confidence 689999995 9 99999999999899999999999641 1122232 24578899999999975 579999999
Q ss_pred CChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccCchHH--HHHHHHHHHHhcCCCCCeEEEe
Q 025154 114 TDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTLSIG--SILLQQAAISASFHYKNVEIVE 190 (257)
Q Consensus 114 T~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spNfSlG--vnll~~~a~~l~~~~~DiEIiE 190 (257)
|.|..+.+++..|+++|+||++.++ ..+.++.++|.++|+++|+.+.++.|+-.- +.-++++.+. +..-++..++
T Consensus 72 tp~~~H~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~--g~iG~i~~~~ 149 (387)
T 3moi_A 72 SPHQFHCEHVVQASEQGLHIIVEKPLTLSRDEADRMIEAVERAGVHLVVGTSRSHDPVVRTLRAIVQE--GSVGRVSMLN 149 (387)
T ss_dssp SCGGGHHHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHHHTCCEEECCCGGGSHHHHHHHHHHHH--CTTCCEEEEE
T ss_pred CCcHHHHHHHHHHHHCCCceeeeCCccCCHHHHHHHHHHHHHhCCeEEEEeccccCHHHHHHHHHHhc--CCCCCeEEEE
Confidence 9999999999999999999999999 889999999999999999999888876543 3334444422 2334666666
Q ss_pred c
Q 025154 191 S 191 (257)
Q Consensus 191 ~ 191 (257)
.
T Consensus 150 ~ 150 (387)
T 3moi_A 150 C 150 (387)
T ss_dssp E
T ss_pred E
Confidence 5
No 30
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=99.53 E-value=1.2e-13 Score=125.67 Aligned_cols=149 Identities=8% Similarity=0.068 Sum_probs=114.1
Q ss_pred CCCceEEEEcCCChHHHHHHHHHH-hcCCcEEEEEEecCCCCcchhhhhcCCCCCCe-eeecCHHHHHhccccCCCccEE
Q 025154 33 QSNIKVIINGAVKEIGRAAVIAVT-KARGMEVAGAIDSHSVGEDIGMVCDMEQPLEI-PVMSDLTMVLGSISQSKARAVV 110 (257)
Q Consensus 33 ~~~ikV~V~Ga~GrMG~~i~~~i~-~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv-~v~~dl~~~l~~~~~~~~~DVv 110 (257)
..|+||+|+|+ |+||+.+++.+. ..+++++++++|+.. ..+..++ ...++ .+++|++++++. .++|+|
T Consensus 6 ~~~~~v~iiG~-G~ig~~~~~~l~~~~~~~~~vav~d~~~--~~~~~~a---~~~g~~~~~~~~~~~l~~----~~~D~V 75 (346)
T 3cea_A 6 RKPLRAAIIGL-GRLGERHARHLVNKIQGVKLVAACALDS--NQLEWAK---NELGVETTYTNYKDMIDT----ENIDAI 75 (346)
T ss_dssp CCCEEEEEECC-STTHHHHHHHHHHTCSSEEEEEEECSCH--HHHHHHH---HTTCCSEEESCHHHHHTT----SCCSEE
T ss_pred CCcceEEEEcC-CHHHHHHHHHHHhcCCCcEEEEEecCCH--HHHHHHH---HHhCCCcccCCHHHHhcC----CCCCEE
Confidence 34799999995 999999999988 778999999998641 1122222 24566 678999999863 479999
Q ss_pred EEcCChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhc-CceEEEccCc--hHHHHHHHHHHHHhcCCCCCe
Q 025154 111 IDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKA-SMGCLIAPTL--SIGSILLQQAAISASFHYKNV 186 (257)
Q Consensus 111 IDFT~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~-gipvl~spNf--SlGvnll~~~a~~l~~~~~Di 186 (257)
+++|.+..+.+.+..|+++|++|+++++ ..+.++.++|.++++++ |+.++.+.|+ +-++..+.++.+. +..-++
T Consensus 76 ~i~tp~~~h~~~~~~al~~G~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~~~~~~~~r~~p~~~~~~~~i~~--g~iG~i 153 (346)
T 3cea_A 76 FIVAPTPFHPEMTIYAMNAGLNVFCEKPLGLDFNEVDEMAKVIKSHPNQIFQSGFMRRYDDSYRYAKKIVDN--GDIGKI 153 (346)
T ss_dssp EECSCGGGHHHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHTCTTSCEECCCGGGTCHHHHHHHHHHHT--TTTCSE
T ss_pred EEeCChHhHHHHHHHHHHCCCEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEecccccCHHHHHHHHHHHc--CCCCCe
Confidence 9999999999999999999999999986 78889999999999998 8888877774 3355445544421 123466
Q ss_pred EEEeccC
Q 025154 187 EIVESRP 193 (257)
Q Consensus 187 EIiE~HH 193 (257)
..++.++
T Consensus 154 ~~v~~~~ 160 (346)
T 3cea_A 154 IYMRGYG 160 (346)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 6666543
No 31
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=99.53 E-value=9.9e-14 Score=125.75 Aligned_cols=132 Identities=12% Similarity=0.075 Sum_probs=107.7
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCe-eeecCHHHHHhccccCCCccEEEEc
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEI-PVMSDLTMVLGSISQSKARAVVIDF 113 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv-~v~~dl~~~l~~~~~~~~~DVvIDF 113 (257)
||||+|+|+ |+||+.+++.+...+++++++++|+.. ..+..++ ...++ .+++|++++++ .++|+|+.+
T Consensus 1 ~~~vgiiG~-G~~g~~~~~~l~~~~~~~~~~v~d~~~--~~~~~~~---~~~~~~~~~~~~~~~l~-----~~~D~V~i~ 69 (325)
T 2ho3_A 1 MLKLGVIGT-GAISHHFIEAAHTSGEYQLVAIYSRKL--ETAATFA---SRYQNIQLFDQLEVFFK-----SSFDLVYIA 69 (325)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHTTSEEEEEEECSSH--HHHHHHG---GGSSSCEEESCHHHHHT-----SSCSEEEEC
T ss_pred CeEEEEEeC-CHHHHHHHHHHHhCCCeEEEEEEeCCH--HHHHHHH---HHcCCCeEeCCHHHHhC-----CCCCEEEEe
Confidence 689999995 999999999998888999999998641 1122232 23454 67899999983 489999999
Q ss_pred CChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccC--chHHHHHHHHHHH
Q 025154 114 TDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPT--LSIGSILLQQAAI 177 (257)
Q Consensus 114 T~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spN--fSlGvnll~~~a~ 177 (257)
|.+..+.+.+..|+++|++|+++++ ..+.++.++|.++|+++|+.++.+.| |+-++..++++.+
T Consensus 70 tp~~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i~ 136 (325)
T 2ho3_A 70 SPNSLHFAQAKAALSAGKHVILEKPAVSQPQEWFDLIQTAEKNNCFIFEAARNYHEKAFTTIKNFLA 136 (325)
T ss_dssp SCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCEEEECTTTTCHHHHHHHHHHT
T ss_pred CChHHHHHHHHHHHHcCCcEEEecCCcCCHHHHHHHHHHHHHcCCEEEEEEhhhcChHHHHHHHHhh
Confidence 9999999999999999999999987 78899999999999999998887766 4556655655553
No 32
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=99.53 E-value=4.3e-14 Score=127.74 Aligned_cols=138 Identities=19% Similarity=0.190 Sum_probs=108.1
Q ss_pred CCCCCCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccE
Q 025154 30 NPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAV 109 (257)
Q Consensus 30 ~~~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DV 109 (257)
+|...++||+|+|+ |+||+.+++.+.+.+++++++++|+.. ..+..+. .. +++++|+++++++ .++|+
T Consensus 5 p~~~~~~~igiIG~-G~~g~~~~~~l~~~~~~~~v~v~d~~~--~~~~~~~----~~-~~~~~~~~~~l~~----~~~D~ 72 (315)
T 3c1a_A 5 PANNSPVRLALIGA-GRWGKNYIRTIAGLPGAALVRLASSNP--DNLALVP----PG-CVIESDWRSVVSA----PEVEA 72 (315)
T ss_dssp ----CCEEEEEEEC-TTTTTTHHHHHHHCTTEEEEEEEESCH--HHHTTCC----TT-CEEESSTHHHHTC----TTCCE
T ss_pred CCCCCcceEEEECC-cHHHHHHHHHHHhCCCcEEEEEEeCCH--HHHHHHH----hh-CcccCCHHHHhhC----CCCCE
Confidence 34456799999995 999999999998888999999999641 1111121 12 6678999999963 47999
Q ss_pred EEEcCChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccCc--hHHHHHHHHHHHHh
Q 025154 110 VIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTL--SIGSILLQQAAISA 179 (257)
Q Consensus 110 vIDFT~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spNf--SlGvnll~~~a~~l 179 (257)
|+.+|.+..+.+.+..|+++|++|++.++ ..+.++.++|.++|+++|+.++.+.|+ +-.+..++++.+.+
T Consensus 73 V~i~tp~~~h~~~~~~al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i~~l 145 (315)
T 3c1a_A 73 VIIATPPATHAEITLAAIASGKAVLVEKPLTLDLAEAEAVAAAAKATGVMVWVEHTQLFNPAWEALKADLTSI 145 (315)
T ss_dssp EEEESCGGGHHHHHHHHHHTTCEEEEESSSCSCHHHHHHHHHHHHHHCCCEEEECGGGGCHHHHHHHHTHHHH
T ss_pred EEEeCChHHHHHHHHHHHHCCCcEEEcCCCcCCHHHHHHHHHHHHHcCCEEEEeechhcCHHHHHHHHHHHHc
Confidence 99999999999999999999999999986 778999999999999999988887764 44555555555433
No 33
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=99.53 E-value=4.3e-14 Score=129.23 Aligned_cols=149 Identities=11% Similarity=0.071 Sum_probs=116.0
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCee-eecCHHHHHhccccCCCccEEEEc
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIP-VMSDLTMVLGSISQSKARAVVIDF 113 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~-v~~dl~~~l~~~~~~~~~DVvIDF 113 (257)
|+||+|+|+ |.||+.+++.+.+.++++|++++|+.. ..+..++ ...+++ +|+|+++++++ .++|+|+.+
T Consensus 2 ~~rvgiIG~-G~~g~~~~~~l~~~~~~~l~av~d~~~--~~~~~~~---~~~~~~~~~~~~~~ll~~----~~~D~V~i~ 71 (344)
T 3ezy_A 2 SLRIGVIGL-GRIGTIHAENLKMIDDAILYAISDVRE--DRLREMK---EKLGVEKAYKDPHELIED----PNVDAVLVC 71 (344)
T ss_dssp CEEEEEECC-SHHHHHHHHHGGGSTTEEEEEEECSCH--HHHHHHH---HHHTCSEEESSHHHHHHC----TTCCEEEEC
T ss_pred eeEEEEEcC-CHHHHHHHHHHHhCCCcEEEEEECCCH--HHHHHHH---HHhCCCceeCCHHHHhcC----CCCCEEEEc
Confidence 689999995 999999999998889999999999641 1122222 134554 79999999974 579999999
Q ss_pred CChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccCchHH--HHHHHHHHHHhcCCCCCeEEEe
Q 025154 114 TDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTLSIG--SILLQQAAISASFHYKNVEIVE 190 (257)
Q Consensus 114 T~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spNfSlG--vnll~~~a~~l~~~~~DiEIiE 190 (257)
|.+..+.+.+..|+++|++|++.++ ..+.++.++|.++|+++|+.++++.|+-.- +..++++.+. +..-++..++
T Consensus 72 tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~--G~iG~i~~~~ 149 (344)
T 3ezy_A 72 SSTNTHSELVIACAKAKKHVFCEKPLSLNLADVDRMIEETKKADVILFTGFNRRFDRNFKKLKEAVEN--GTIGKPHVLR 149 (344)
T ss_dssp SCGGGHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHHT--TTTSSEEEEE
T ss_pred CCCcchHHHHHHHHhcCCeEEEECCCCCCHHHHHHHHHHHHHhCCcEEEeecccCCHHHHHHHHHHHc--CCCCCeEEEE
Confidence 9999999999999999999999999 899999999999999999988887776443 3234444321 2345777776
Q ss_pred ccCCC
Q 025154 191 SRPNA 195 (257)
Q Consensus 191 ~HH~~ 195 (257)
.+.+.
T Consensus 150 ~~~~~ 154 (344)
T 3ezy_A 150 ITSRD 154 (344)
T ss_dssp EEEEC
T ss_pred EEeeC
Confidence 65443
No 34
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=99.52 E-value=2.1e-13 Score=126.06 Aligned_cols=145 Identities=14% Similarity=0.137 Sum_probs=115.0
Q ss_pred CCceEEEEcCCChHHHH-HHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEE
Q 025154 34 SNIKVIINGAVKEIGRA-AVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVID 112 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~-i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvID 112 (257)
.|+||+|+|+ |+||+. +++.+...++++|++++|+.. ..+.. ...++++|+|+++++++ .++|+|+.
T Consensus 6 ~~~rvgiiG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~--~~~~~-----~~~~~~~~~~~~~ll~~----~~~D~V~i 73 (364)
T 3e82_A 6 NTINIALIGY-GFVGKTFHAPLIRSVPGLNLAFVASRDE--EKVKR-----DLPDVTVIASPEAAVQH----PDVDLVVI 73 (364)
T ss_dssp -CEEEEEECC-SHHHHHTHHHHHHTSTTEEEEEEECSCH--HHHHH-----HCTTSEEESCHHHHHTC----TTCSEEEE
T ss_pred CcceEEEECC-CHHHHHHHHHHHhhCCCeEEEEEEcCCH--HHHHh-----hCCCCcEECCHHHHhcC----CCCCEEEE
Confidence 4699999995 999996 888888889999999999642 11111 12367889999999974 57999999
Q ss_pred cCChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccC--chHHHHHHHHHHHHhcCCCCCeEEE
Q 025154 113 FTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPT--LSIGSILLQQAAISASFHYKNVEIV 189 (257)
Q Consensus 113 FT~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spN--fSlGvnll~~~a~~l~~~~~DiEIi 189 (257)
+|.+..+.+.+..|+++|++|++.+| ..+.++.++|.++|+++|+.+.+..| |.-.+.-++++.+. +..-++.-+
T Consensus 74 ~tp~~~H~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~--g~iG~i~~~ 151 (364)
T 3e82_A 74 ASPNATHAPLARLALNAGKHVVVDKPFTLDMQEARELIALAEEKQRLLSVFHNRRWDSDYLGIRQVIEQ--GTLGAVKHF 151 (364)
T ss_dssp CSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHH--TTTCSEEEE
T ss_pred eCChHHHHHHHHHHHHCCCcEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEeecccCHHHHHHHHHHHc--CCCcceEEE
Confidence 99999999999999999999999999 88999999999999999999988887 45555545555432 133466655
Q ss_pred ecc
Q 025154 190 ESR 192 (257)
Q Consensus 190 E~H 192 (257)
+.+
T Consensus 152 ~~~ 154 (364)
T 3e82_A 152 ESH 154 (364)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 35
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=99.52 E-value=1.5e-13 Score=123.89 Aligned_cols=121 Identities=15% Similarity=0.157 Sum_probs=103.0
Q ss_pred CCCceEEEEcCCChHHHHHHHHHHh---cCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccE
Q 025154 33 QSNIKVIINGAVKEIGRAAVIAVTK---ARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAV 109 (257)
Q Consensus 33 ~~~ikV~V~Ga~GrMG~~i~~~i~~---~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DV 109 (257)
..|+||+|+|+ |.||+.+++.+.. .++++|+++.|+.... ...+++ +.|+++++++ .++|+
T Consensus 5 ~~~~rvgiIG~-G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~a----------~~~g~~-~~~~~ell~~----~~vD~ 68 (294)
T 1lc0_A 5 SGKFGVVVVGV-GRAGSVRLRDLKDPRSAAFLNLIGFVSRRELG----------SLDEVR-QISLEDALRS----QEIDV 68 (294)
T ss_dssp CCSEEEEEECC-SHHHHHHHHHHTSHHHHTTEEEEEEECSSCCC----------EETTEE-BCCHHHHHHC----SSEEE
T ss_pred CCcceEEEEEE-cHHHHHHHHHHhccccCCCEEEEEEECchHHH----------HHcCCC-CCCHHHHhcC----CCCCE
Confidence 45799999995 9999999998876 6889999999864211 134566 5899999974 57999
Q ss_pred EEEcCChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccCchHHH
Q 025154 110 VIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTLSIGS 169 (257)
Q Consensus 110 vIDFT~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spNfSlGv 169 (257)
|+..|.+..+.+++..|+++|+||++.++ ..+.++.++|.++|+++|+.++.+.|+-..=
T Consensus 69 V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~~~~~~r~~p 129 (294)
T 1lc0_A 69 AYICSESSSHEDYIRQFLQAGKHVLVEYPMTLSFAAAQELWELAAQKGRVLHEEHVELLME 129 (294)
T ss_dssp EEECSCGGGHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHTTCCEEEECGGGGSH
T ss_pred EEEeCCcHhHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEEhHhccH
Confidence 99999999999999999999999999998 6789999999999999999999888876554
No 36
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=99.52 E-value=7.3e-14 Score=127.73 Aligned_cols=149 Identities=14% Similarity=0.109 Sum_probs=115.0
Q ss_pred CceEEEEcCCChHHHHHHHHHH-hcCCcEEEEEEecCCCCcchhhhhcCCCCCC--eeeecCHHHHHhccccCCCccEEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVT-KARGMEVAGAIDSHSVGEDIGMVCDMEQPLE--IPVMSDLTMVLGSISQSKARAVVI 111 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~-~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~g--v~v~~dl~~~l~~~~~~~~~DVvI 111 (257)
|+||+|+|+ |.||+.+++.+. ..++++|++++|+.. ..+..+. ..++ +.+|+|+++++++ .++|+|+
T Consensus 2 ~~rigiIG~-G~~g~~~~~~l~~~~~~~~l~av~d~~~--~~~~~~~---~~~g~~~~~~~~~~~ll~~----~~~D~V~ 71 (344)
T 3mz0_A 2 SLRIGVIGT-GAIGKEHINRITNKLSGAEIVAVTDVNQ--EAAQKVV---EQYQLNATVYPNDDSLLAD----ENVDAVL 71 (344)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHTCSSEEEEEEECSSH--HHHHHHH---HHTTCCCEEESSHHHHHHC----TTCCEEE
T ss_pred eEEEEEECc-cHHHHHHHHHHHhhCCCcEEEEEEcCCH--HHHHHHH---HHhCCCCeeeCCHHHHhcC----CCCCEEE
Confidence 689999995 999999999998 679999999999641 1122222 1345 6789999999974 5799999
Q ss_pred EcCChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceE-EEccCc--hHHHHHHHHHHHHhcCCCCCeE
Q 025154 112 DFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGC-LIAPTL--SIGSILLQQAAISASFHYKNVE 187 (257)
Q Consensus 112 DFT~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipv-l~spNf--SlGvnll~~~a~~l~~~~~DiE 187 (257)
.+|.+..+.+.+..|+++|++|++.++ ..+.++.++|.++|+++|+.+ .++.|+ .-.+..++++.+. +..-++.
T Consensus 72 i~tp~~~h~~~~~~al~~Gk~vl~EKP~a~~~~e~~~l~~~a~~~g~~~~~v~~~~r~~p~~~~~k~~i~~--g~iG~i~ 149 (344)
T 3mz0_A 72 VTSWGPAHESSVLKAIKAQKYVFCEKPLATTAEGCMRIVEEEIKVGKRLVQVGFMRRYDSGYVQLKEALDN--HVIGEPL 149 (344)
T ss_dssp ECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHSSCCEEECCGGGGSHHHHHHHHHHHT--TTTSSEE
T ss_pred ECCCchhHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHHCCEEEEEecccccCHHHHHHHHHHHc--CCCCCcE
Confidence 999999999999999999999999999 889999999999999999887 566663 3344334444322 2345676
Q ss_pred EEeccCCC
Q 025154 188 IVESRPNA 195 (257)
Q Consensus 188 IiE~HH~~ 195 (257)
.++..++.
T Consensus 150 ~v~~~~~~ 157 (344)
T 3mz0_A 150 MIHCAHRN 157 (344)
T ss_dssp EEEEEEEC
T ss_pred EEEEEecC
Confidence 66665543
No 37
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=99.52 E-value=5.3e-14 Score=130.10 Aligned_cols=165 Identities=11% Similarity=0.051 Sum_probs=109.8
Q ss_pred cccccccccCccccccCCCCCCCceEEEEcCCChHHH-HHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCC-eee
Q 025154 13 HHISQNVKAKRFISCSTNPPQSNIKVIINGAVKEIGR-AAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLE-IPV 90 (257)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~ikV~V~Ga~GrMG~-~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~g-v~v 90 (257)
||-|+.|.-++...+= +++-.++||||+|+ |++|. .++..+. .++++|++++|+.. ..+..++ ..++ ..+
T Consensus 5 ~~~~~~~~~~~~~~~~-~~Mm~~irvgiiG~-G~~~~~~~~~~~~-~~~~~lvav~d~~~--~~a~~~a---~~~~~~~~ 76 (361)
T 3u3x_A 5 HHHSSGVDLGTENLYF-QSMMDELRFAAVGL-NHNHIYGQVNCLL-RAGARLAGFHEKDD--ALAAEFS---AVYADARR 76 (361)
T ss_dssp ----------------------CCEEEEECC-CSTTHHHHHHHHH-HTTCEEEEEECSCH--HHHHHHH---HHSSSCCE
T ss_pred ccccccccCCCccchh-hhhccCcEEEEECc-CHHHHHHHHHHhh-cCCcEEEEEEcCCH--HHHHHHH---HHcCCCcc
Confidence 5667777777766544 22333589999995 99996 4565554 69999999999641 1222232 1344 578
Q ss_pred ecCHHHHHhccccCCCccEEEEcCChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccCchH--
Q 025154 91 MSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTLSI-- 167 (257)
Q Consensus 91 ~~dl~~~l~~~~~~~~~DVvIDFT~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spNfSl-- 167 (257)
|+|+++++++ .++|+|+..|.+..+.+++..|+++|++|++.++ ..+.++.++|.++|+++|+.+.++.|+-.
T Consensus 77 ~~~~~~ll~~----~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~v~~~~R~~~ 152 (361)
T 3u3x_A 77 IATAEEILED----ENIGLIVSAAVSSERAELAIRAMQHGKDVLVDKPGMTSFDQLAKLRRVQAETGRIFSILYSEHFES 152 (361)
T ss_dssp ESCHHHHHTC----TTCCEEEECCCHHHHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHTTCCCEEEECHHHHTC
T ss_pred cCCHHHHhcC----CCCCEEEEeCChHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEechHhhCC
Confidence 9999999974 5799999999999999999999999999999999 88999999999999999999998888644
Q ss_pred -HHHHHHHHHHHhcCCCCCeEEEec
Q 025154 168 -GSILLQQAAISASFHYKNVEIVES 191 (257)
Q Consensus 168 -Gvnll~~~a~~l~~~~~DiEIiE~ 191 (257)
.+.-++++.+. +..-++..++.
T Consensus 153 p~~~~~k~~i~~--g~iG~i~~~~~ 175 (361)
T 3u3x_A 153 PATVKAGELVAA--GAIGEVVHIVG 175 (361)
T ss_dssp HHHHHHHHHHHT--TTTSSEEEEEE
T ss_pred HHHHHHHHHHHc--CCCCCeEEEEE
Confidence 34334444421 12345555554
No 38
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=99.52 E-value=8e-14 Score=127.68 Aligned_cols=147 Identities=12% Similarity=0.059 Sum_probs=113.0
Q ss_pred CCceEEEEcCCC-hHHHHHHHHHHhc-CCcEEEEEEecCCCCcchhhhhcCCCCCCe-eeecCHHHHHhccccCCCccEE
Q 025154 34 SNIKVIINGAVK-EIGRAAVIAVTKA-RGMEVAGAIDSHSVGEDIGMVCDMEQPLEI-PVMSDLTMVLGSISQSKARAVV 110 (257)
Q Consensus 34 ~~ikV~V~Ga~G-rMG~~i~~~i~~~-~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv-~v~~dl~~~l~~~~~~~~~DVv 110 (257)
.++||+|+|+ | .||+.+++.+... ++++|++++|+.. ..+..++ ..+++ .+|+|+++++++ .++|+|
T Consensus 17 ~~irvgiIG~-G~~~g~~~~~~l~~~~~~~~lvav~d~~~--~~~~~~a---~~~~~~~~~~~~~~ll~~----~~vD~V 86 (340)
T 1zh8_A 17 RKIRLGIVGC-GIAARELHLPALKNLSHLFEITAVTSRTR--SHAEEFA---KMVGNPAVFDSYEELLES----GLVDAV 86 (340)
T ss_dssp CCEEEEEECC-SHHHHHTHHHHHHTTTTTEEEEEEECSSH--HHHHHHH---HHHSSCEEESCHHHHHHS----SCCSEE
T ss_pred CceeEEEEec-CHHHHHHHHHHHHhCCCceEEEEEEcCCH--HHHHHHH---HHhCCCcccCCHHHHhcC----CCCCEE
Confidence 4799999995 9 8999999999887 8999999999641 1122222 13454 689999999974 579999
Q ss_pred EEcCChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccCchH--HHHHHHHHHHHhcCCCCCeE
Q 025154 111 IDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTLSI--GSILLQQAAISASFHYKNVE 187 (257)
Q Consensus 111 IDFT~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spNfSl--Gvnll~~~a~~l~~~~~DiE 187 (257)
+..|.+..+.+.+..|+++|++|++++| ..+.++.++|.++|+++|+.+.++.|+-. .+..++++.+. +..-++.
T Consensus 87 ~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~--g~iG~i~ 164 (340)
T 1zh8_A 87 DLTLPVELNLPFIEKALRKGVHVICEKPISTDVETGKKVVELSEKSEKTVYIAENFRHVPAFWKAKELVES--GAIGDPV 164 (340)
T ss_dssp EECCCGGGHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHCSSCEEEECGGGGCHHHHHHHHHHHT--TTTSSEE
T ss_pred EEeCCchHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHHhc--CCCCCcE
Confidence 9999999999999999999999999999 78999999999999999998888777644 33224443321 2234565
Q ss_pred EEecc
Q 025154 188 IVESR 192 (257)
Q Consensus 188 IiE~H 192 (257)
-++.+
T Consensus 165 ~v~~~ 169 (340)
T 1zh8_A 165 FMNWQ 169 (340)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55543
No 39
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=99.51 E-value=1.2e-13 Score=132.76 Aligned_cols=172 Identities=11% Similarity=0.101 Sum_probs=125.3
Q ss_pred eeeccccccccccCcc---------ccccCCCCCCCceEEEEcCC---ChHHHHHHHHHHhc-CCcEEEEEEecCCCCcc
Q 025154 9 HCRMHHISQNVKAKRF---------ISCSTNPPQSNIKVIINGAV---KEIGRAAVIAVTKA-RGMEVAGAIDSHSVGED 75 (257)
Q Consensus 9 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~ikV~V~Ga~---GrMG~~i~~~i~~~-~~~eLvg~vd~~~~g~d 75 (257)
|-.-||-|.||+.+.- ..++.+|+ .|+||+|+|+. |.||+.+++.+... ++++|++++|+.. ..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m-~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~--~~ 81 (479)
T 2nvw_A 5 HHHHHHSSENLYFQGHMLANNNKRSKLSTVPSS-RPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTL--KS 81 (479)
T ss_dssp ---CTTCGGGTGGGTCCCCCCCTTSGGGSSGGG-CCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCH--HH
T ss_pred cccccccchhHHHHHHHHhhccccccCCCCCCC-CcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCH--HH
Confidence 4456888889887643 22333333 36999999952 99999999999887 8999999999641 11
Q ss_pred hhhhhcCCCCCCee---eecCHHHHHhccccCCCccEEEEcCChHhHHHHHHHHHHcC------CCeEEeCC-CCCHHHH
Q 025154 76 IGMVCDMEQPLEIP---VMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFG------MRSVVYVP-HIQLETV 145 (257)
Q Consensus 76 ~g~~~g~~~~~gv~---v~~dl~~~l~~~~~~~~~DVvIDFT~p~~~~~~~~~a~~~G------i~vViGTT-G~s~e~~ 145 (257)
+..++ ..++++ +|+|+++++++ .++|+|+..|.+..+.+.+..|+++| ++|+|.++ ..+.++.
T Consensus 82 a~~~a---~~~g~~~~~~~~d~~ell~~----~~vD~V~I~tp~~~H~~~~~~al~aG~~~~~~khVl~EKPla~~~~ea 154 (479)
T 2nvw_A 82 SLQTI---EQLQLKHATGFDSLESFAQY----KDIDMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWALAASVQQA 154 (479)
T ss_dssp HHHHH---HHTTCTTCEEESCHHHHHHC----TTCSEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESSSSSSHHHH
T ss_pred HHHHH---HHcCCCcceeeCCHHHHhcC----CCCCEEEEcCCcHHHHHHHHHHHHCCCCcCCceeEEEeCCCcCCHHHH
Confidence 22222 134554 89999999974 57999999999999999999999999 99999998 7889999
Q ss_pred HHHHHHhhhcC-ceEEEccCchH--HHHHHHHHHHHhcCCCCCeEEEecc
Q 025154 146 SALSAFCDKAS-MGCLIAPTLSI--GSILLQQAAISASFHYKNVEIVESR 192 (257)
Q Consensus 146 ~~L~~~a~~~g-ipvl~spNfSl--Gvnll~~~a~~l~~~~~DiEIiE~H 192 (257)
++|.++|+++| +.++++.|+-. .+..++++.+. +..-++..++.+
T Consensus 155 ~~l~~~a~~~g~~~~~v~~~~R~~p~~~~~k~~i~~--G~iG~i~~v~~~ 202 (479)
T 2nvw_A 155 EELYSISQQRANLQTIICLQGRKSPYIVRAKELISE--GCIGDINSIEIS 202 (479)
T ss_dssp HHHHHHHHTCTTCEEEEECGGGGCHHHHHHHHHHHT--TTTCSEEEEEEE
T ss_pred HHHHHHHHHcCCeEEEEEeccccCHHHHHHHHHHHc--CCCCCeEEEEEE
Confidence 99999999999 88887777543 33334444321 123356555544
No 40
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=99.51 E-value=5.7e-14 Score=131.43 Aligned_cols=134 Identities=14% Similarity=0.109 Sum_probs=107.2
Q ss_pred CCCceEEEEcCCChHHHHHHHHHHhc--------CCcEEEEEEecCCCCcchhhhhcCCCCCCe-eeecCHHHHHhcccc
Q 025154 33 QSNIKVIINGAVKEIGRAAVIAVTKA--------RGMEVAGAIDSHSVGEDIGMVCDMEQPLEI-PVMSDLTMVLGSISQ 103 (257)
Q Consensus 33 ~~~ikV~V~Ga~GrMG~~i~~~i~~~--------~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv-~v~~dl~~~l~~~~~ 103 (257)
..+|||||+|+ |.||+.+++.+.+. ++.+|+|++|+.. ..+.+++ +++++ .+|+|+++++++
T Consensus 24 s~klrvgiIG~-G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~--~~a~~~a---~~~~~~~~y~d~~~ll~~--- 94 (412)
T 4gqa_A 24 SARLNIGLIGS-GFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQ--AMAERHA---AKLGAEKAYGDWRELVND--- 94 (412)
T ss_dssp -CEEEEEEECC-SHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSH--HHHHHHH---HHHTCSEEESSHHHHHHC---
T ss_pred cccceEEEEcC-cHHHHHHHHHHHhccccccccCCCeEEEEEEcCCH--HHHHHHH---HHcCCCeEECCHHHHhcC---
Confidence 34699999995 99999999988764 4789999999641 1122222 23455 489999999975
Q ss_pred CCCccEEEEcCChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccCchHHH--HHHHHHH
Q 025154 104 SKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTLSIGS--ILLQQAA 176 (257)
Q Consensus 104 ~~~~DVvIDFT~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spNfSlGv--nll~~~a 176 (257)
.++|+|+..|.+..+.+++..|+++|+||+|.+| ..+.++.++|.++|+++|+.+.+..|+-.-= ..++++.
T Consensus 95 -~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i 169 (412)
T 4gqa_A 95 -PQVDVVDITSPNHLHYTMAMAAIAAGKHVYCEKPLAVNEQQAQEMAQAARRAGVKTMVAFNNIKTPAALLAKQII 169 (412)
T ss_dssp -TTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHHHTCCEEEECGGGTSHHHHHHHHHH
T ss_pred -CCCCEEEECCCcHHHHHHHHHHHHcCCCeEeecCCcCCHHHHHHHHHHHHHhCCeeeeccceecCHHHHHHHHHH
Confidence 6899999999999999999999999999999999 7899999999999999999999887764433 3344444
No 41
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=99.50 E-value=1.2e-13 Score=126.50 Aligned_cols=147 Identities=18% Similarity=0.109 Sum_probs=113.6
Q ss_pred CceEEEEcCCChHHHH-HHH-HHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEE
Q 025154 35 NIKVIINGAVKEIGRA-AVI-AVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVID 112 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~-i~~-~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvID 112 (257)
|+||+|+|+ |+||+. ++. .+...++++|++++|+.... + +... ...++++|+|+++++++ .++|+|+.
T Consensus 2 ~~rvgiiG~-G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~--~-~~~~--~~~~~~~~~~~~~ll~~----~~~D~V~i 71 (345)
T 3f4l_A 2 VINCAFIGF-GKSTTRYHLPYVLNRKDSWHVAHIFRRHAKP--E-EQAP--IYSHIHFTSDLDEVLND----PDVKLVVV 71 (345)
T ss_dssp CEEEEEECC-SHHHHHHTHHHHTTCTTTEEEEEEECSSCCG--G-GGSG--GGTTCEEESCTHHHHTC----TTEEEEEE
T ss_pred ceEEEEEec-CHHHHHHHHHHHHhcCCCeEEEEEEcCCHhH--H-HHHH--hcCCCceECCHHHHhcC----CCCCEEEE
Confidence 689999995 999985 787 55778999999999964211 1 1111 13478899999999974 57999999
Q ss_pred cCChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccCc--hHHHHHHHHHHHHhcCCCCCeEEE
Q 025154 113 FTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTL--SIGSILLQQAAISASFHYKNVEIV 189 (257)
Q Consensus 113 FT~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spNf--SlGvnll~~~a~~l~~~~~DiEIi 189 (257)
.|.+..+.+.+..|+++|++|++.+| ..+.++.++|.++|+++|+.++++.|+ .-.+.-++++.+. +..-++.-+
T Consensus 72 ~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~--g~iG~i~~~ 149 (345)
T 3f4l_A 72 CTHADSHFEYAKRALEAGKNVLVEKPFTPTLAQAKELFALAKSKGLTVTPYQNRRFDSCFLTAKKAIES--GKLGEIVEV 149 (345)
T ss_dssp CSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGCHHHHHHHHHHHH--STTCSEEEE
T ss_pred cCChHHHHHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEechhcCHHHHHHHHHHhc--CCCCCeEEE
Confidence 99999999999999999999999998 789999999999999999999888775 3444445555432 123466666
Q ss_pred eccC
Q 025154 190 ESRP 193 (257)
Q Consensus 190 E~HH 193 (257)
+.+.
T Consensus 150 ~~~~ 153 (345)
T 3f4l_A 150 ESHF 153 (345)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 6653
No 42
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=99.50 E-value=1.5e-13 Score=124.20 Aligned_cols=119 Identities=14% Similarity=0.233 Sum_probs=98.3
Q ss_pred CceEEEEcCCChHHHH-HHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEc
Q 025154 35 NIKVIINGAVKEIGRA-AVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~-i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDF 113 (257)
|+||+|+|+ |+||+. +++.+...++++|++++|+.. ..+..+. ...++++++|++++ . .++|+|+.+
T Consensus 5 ~~~vgiiG~-G~~g~~~~~~~l~~~~~~~lvav~d~~~--~~~~~~~---~~~g~~~~~~~~~l-~-----~~~D~V~i~ 72 (319)
T 1tlt_A 5 KLRIGVVGL-GGIAQKAWLPVLAAASDWTLQGAWSPTR--AKALPIC---ESWRIPYADSLSSL-A-----ASCDAVFVH 72 (319)
T ss_dssp CEEEEEECC-STHHHHTHHHHHHSCSSEEEEEEECSSC--TTHHHHH---HHHTCCBCSSHHHH-H-----TTCSEEEEC
T ss_pred cceEEEECC-CHHHHHHHHHHHHhCCCeEEEEEECCCH--HHHHHHH---HHcCCCccCcHHHh-h-----cCCCEEEEe
Confidence 689999995 999996 888888889999999999642 1122222 13456688899877 4 489999999
Q ss_pred CChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccCc
Q 025154 114 TDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTL 165 (257)
Q Consensus 114 T~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spNf 165 (257)
|.+..+.+.+..|+++|++|++++| +.+.++.++|.++|+++|+.++.+-|+
T Consensus 73 tp~~~h~~~~~~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~~~~~ 125 (319)
T 1tlt_A 73 SSTASHFDVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKLTLMVGFNR 125 (319)
T ss_dssp SCTTHHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEECGG
T ss_pred CCchhHHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEeeec
Confidence 9999999999999999999999986 788999999999999988888776555
No 43
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=99.50 E-value=2.8e-13 Score=129.48 Aligned_cols=157 Identities=19% Similarity=0.139 Sum_probs=114.9
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhh----cCC----------------CCCCeeeecC
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVC----DME----------------QPLEIPVMSD 93 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~----g~~----------------~~~gv~v~~d 93 (257)
.++||||+|+ |+||+.+++.+...++++|++++|... ..+..++ |.. ....+.+|+|
T Consensus 22 k~IRVGIIGa-G~iG~~~~~~l~~~~~veLvAV~D~~~--era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D 98 (446)
T 3upl_A 22 KPIRIGLIGA-GEMGTDIVTQVARMQGIEVGALSARRL--PNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDD 98 (446)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHTTSSSEEEEEEECSST--HHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESC
T ss_pred CceEEEEECC-hHHHHHHHHHHhhCCCcEEEEEEeCCH--HHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECC
Confidence 4799999996 999999999998899999999999642 1111111 100 0124678999
Q ss_pred HHHHHhccccCCCccEEEEcC-ChHhHHHHHHHHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCchHHHHH-
Q 025154 94 LTMVLGSISQSKARAVVIDFT-DASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSIL- 171 (257)
Q Consensus 94 l~~~l~~~~~~~~~DVvIDFT-~p~~~~~~~~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfSlGvnl- 171 (257)
+++++++ .++|+||++| +|+.+.+++..|+++|++||+.+..++.++.++|.++|+++|+-+.++..=.-+..+
T Consensus 99 ~eeLL~d----~dIDaVviaTp~p~~H~e~a~~AL~AGKHVv~~nk~l~~~eg~eL~~~A~e~Gvvl~~~~gdqp~~~~e 174 (446)
T 3upl_A 99 NDLILSN----PLIDVIIDATGIPEVGAETGIAAIRNGKHLVMMNVEADVTIGPYLKAQADKQGVIYSLGAGDEPSSCME 174 (446)
T ss_dssp HHHHHTC----TTCCEEEECSCCHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCCEEECTTSHHHHHHH
T ss_pred HHHHhcC----CCCCEEEEcCCChHHHHHHHHHHHHcCCcEEecCcccCHHHHHHHHHHHHHhCCeeeecCCcchHHHHH
Confidence 9999974 5799999999 567889999999999999999877777788899999999988888877654444422
Q ss_pred HHHHHHHhcCCCCCeEEEeccCCCCCCCC
Q 025154 172 LQQAAISASFHYKNVEIVESRPNARVRYM 200 (257)
Q Consensus 172 l~~~a~~l~~~~~DiEIiE~HH~~K~Dap 200 (257)
+-++++.+ ++.+-....-.+...+-+
T Consensus 175 Lv~~a~~~---G~~~v~~Gkg~~~~~~~~ 200 (446)
T 3upl_A 175 LIEFVSAL---GYEVVSAGKGKNNPLNFD 200 (446)
T ss_dssp HHHHHHHT---TCEEEEEEEEESSCCCTT
T ss_pred HHHHHHhC---CCeEEEeccCcCCcccCC
Confidence 33445444 355555555544444433
No 44
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=99.49 E-value=8.2e-14 Score=132.08 Aligned_cols=149 Identities=9% Similarity=0.027 Sum_probs=112.6
Q ss_pred CCCceEEEEcCCChHHH-HHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCe-----eeecCHHHHHhccccCCC
Q 025154 33 QSNIKVIINGAVKEIGR-AAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEI-----PVMSDLTMVLGSISQSKA 106 (257)
Q Consensus 33 ~~~ikV~V~Ga~GrMG~-~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv-----~v~~dl~~~l~~~~~~~~ 106 (257)
..++||+|+|+ |+||+ .+++.+...++++|++++|+.. ..+..+. ..+++ .+|+|+++++++ .+
T Consensus 81 ~~~irigiIG~-G~~g~~~~~~~l~~~~~~~lvav~d~~~--~~~~~~a---~~~g~~~~~~~~~~~~~~ll~~----~~ 150 (433)
T 1h6d_A 81 DRRFGYAIVGL-GKYALNQILPGFAGCQHSRIEALVSGNA--EKAKIVA---AEYGVDPRKIYDYSNFDKIAKD----PK 150 (433)
T ss_dssp CCCEEEEEECC-SHHHHHTHHHHTTTCSSEEEEEEECSCH--HHHHHHH---HHTTCCGGGEECSSSGGGGGGC----TT
T ss_pred CCceEEEEECC-cHHHHHHHHHHHhhCCCcEEEEEEcCCH--HHHHHHH---HHhCCCcccccccCCHHHHhcC----CC
Confidence 44689999995 99997 8999888888999999999641 1122222 12333 478999999864 57
Q ss_pred ccEEEEcCChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccCchH--HHHHHHHHHHHhcCCC
Q 025154 107 RAVVIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTLSI--GSILLQQAAISASFHY 183 (257)
Q Consensus 107 ~DVvIDFT~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spNfSl--Gvnll~~~a~~l~~~~ 183 (257)
+|+|+.+|.+..+.+++..|+++|+||+++++ .++.++.++|.++|+++|+.++++.|+-. .+..+.++.+. +..
T Consensus 151 vD~V~iatp~~~h~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~--G~i 228 (433)
T 1h6d_A 151 IDAVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMIGYRCHYDPMNRAAVKLIRE--NQL 228 (433)
T ss_dssp CCEEEECSCGGGHHHHHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTCCEEECCGGGGCHHHHHHHHHHHT--TSS
T ss_pred CCEEEEcCCchhHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHhCCeEEEEechhcCHHHHHHHHHHHc--CCC
Confidence 99999999999999999999999999999997 78899999999999999998888777543 33334444321 233
Q ss_pred CCeEEEeccC
Q 025154 184 KNVEIVESRP 193 (257)
Q Consensus 184 ~DiEIiE~HH 193 (257)
-++..++.++
T Consensus 229 G~i~~v~~~~ 238 (433)
T 1h6d_A 229 GKLGMVTTDN 238 (433)
T ss_dssp CSEEEEEEEE
T ss_pred CCcEEEEEEE
Confidence 4666666543
No 45
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=99.49 E-value=4e-13 Score=122.10 Aligned_cols=124 Identities=12% Similarity=0.137 Sum_probs=102.5
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHH--------hccccCC
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVL--------GSISQSK 105 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l--------~~~~~~~ 105 (257)
.|+||+|+|+.|.||+.+++.+... +.+|++++|+...- ..... .-.++.+|+|+++++ ++ .
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~~-~~~lvav~d~~~~~---~~~~~--~~~~~~~~~~~~~ll~~~~~l~~~~----~ 71 (312)
T 3o9z_A 2 HMTRFALTGLAGYIAPRHLKAIKEV-GGVLVASLDPATNV---GLVDS--FFPEAEFFTEPEAFEAYLEDLRDRG----E 71 (312)
T ss_dssp -CCEEEEECTTSSSHHHHHHHHHHT-TCEEEEEECSSCCC---GGGGG--TCTTCEEESCHHHHHHHHHHHHHTT----C
T ss_pred CceEEEEECCChHHHHHHHHHHHhC-CCEEEEEEcCCHHH---HHHHh--hCCCCceeCCHHHHHHHhhhhcccC----C
Confidence 3899999996578999999998865 79999999964211 12211 123678899999998 33 5
Q ss_pred CccEEEEcCChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccCchH
Q 025154 106 ARAVVIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTLSI 167 (257)
Q Consensus 106 ~~DVvIDFT~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spNfSl 167 (257)
++|+|+..|.+..+.++++.|+++|+||++.+| ..+.++.++|.++|+++|+.++.+.|+-.
T Consensus 72 ~vD~V~I~tP~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~ 134 (312)
T 3o9z_A 72 GVDYLSIASPNHLHYPQIRMALRLGANALSEKPLVLWPEEIARLKELEARTGRRVYTVLQLRV 134 (312)
T ss_dssp CCSEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSCHHHHHHHHHHHHHHCCCEEECCGGGG
T ss_pred CCcEEEECCCchhhHHHHHHHHHCCCeEEEECCCCCCHHHHHHHHHHHHHcCCEEEEEeehhc
Confidence 899999999999999999999999999999999 88999999999999999998888777544
No 46
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=99.49 E-value=1.3e-13 Score=125.47 Aligned_cols=149 Identities=11% Similarity=-0.016 Sum_probs=115.1
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcC--CcEEEEEEecCCCCcchhhhhcCCCCCCe-eeecCHHHHHhccccCCCccEEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKAR--GMEVAGAIDSHSVGEDIGMVCDMEQPLEI-PVMSDLTMVLGSISQSKARAVVI 111 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~--~~eLvg~vd~~~~g~d~g~~~g~~~~~gv-~v~~dl~~~l~~~~~~~~~DVvI 111 (257)
|+||+|+| +|+||+.+++.+...+ +++|++++|+.. ..+.+++ ...++ .+|+|+++++++ .++|+|+
T Consensus 2 ~~rigiiG-~G~ig~~~~~~l~~~~~~~~~l~av~d~~~--~~a~~~a---~~~~~~~~~~~~~~ll~~----~~vD~V~ 71 (334)
T 3ohs_X 2 ALRWGIVS-VGLISSDFTAVLQTLPRSEHQVVAVAARDL--SRAKEFA---QKHDIPKAYGSYEELAKD----PNVEVAY 71 (334)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHTTSCTTTEEEEEEECSSH--HHHHHHH---HHHTCSCEESSHHHHHHC----TTCCEEE
T ss_pred ccEEEEEC-chHHHHHHHHHHHhCCCCCeEEEEEEcCCH--HHHHHHH---HHcCCCcccCCHHHHhcC----CCCCEEE
Confidence 68999999 5999999999887766 479999998641 1122232 23466 479999999974 5799999
Q ss_pred EcCChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccCc--hHHHHHHHHHHHHhcCCCCCeEE
Q 025154 112 DFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTL--SIGSILLQQAAISASFHYKNVEI 188 (257)
Q Consensus 112 DFT~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spNf--SlGvnll~~~a~~l~~~~~DiEI 188 (257)
..|.+..+.+++..|+++|+||++.++ ..+.++.++|.++|+++|+.++.+.|+ .-.+.-++++.+. +..-++..
T Consensus 72 i~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~i~~--g~iG~i~~ 149 (334)
T 3ohs_X 72 VGTQHPQHKAAVMLCLAAGKAVLCEKPMGVNAAEVREMVTEARSRGLFLMEAIWTRFFPASEALRSVLAQ--GTLGDLRV 149 (334)
T ss_dssp ECCCGGGHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHTTCCEEEECGGGGSHHHHHHHHHHHH--TTTCSEEE
T ss_pred ECCCcHHHHHHHHHHHhcCCEEEEECCCCCCHHHHHHHHHHHHHhCCEEEEEEhHhcCHHHHHHHHHHhc--CCCCCeEE
Confidence 999999999999999999999999999 789999999999999999988887775 3344335544432 23446766
Q ss_pred EeccCCC
Q 025154 189 VESRPNA 195 (257)
Q Consensus 189 iE~HH~~ 195 (257)
++.+...
T Consensus 150 v~~~~~~ 156 (334)
T 3ohs_X 150 ARAEFGK 156 (334)
T ss_dssp EEEEEEC
T ss_pred EEEEccC
Confidence 6665443
No 47
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=99.49 E-value=2.3e-13 Score=125.62 Aligned_cols=148 Identities=15% Similarity=0.148 Sum_probs=112.6
Q ss_pred CceEEEEcCCChHHHH-HHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCC-CeeeecCHHHHHhccccCCCccEEEE
Q 025154 35 NIKVIINGAVKEIGRA-AVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPL-EIPVMSDLTMVLGSISQSKARAVVID 112 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~-i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~-gv~v~~dl~~~l~~~~~~~~~DVvID 112 (257)
++||+|+|+ |.||+. +++.+.+.++++|++++|+.. ..+..++ ..+ ++++|+|+++++++ .++|+|+.
T Consensus 5 ~~rigiIG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~--~~~~~~a---~~~~~~~~~~~~~~ll~~----~~vD~V~i 74 (359)
T 3m2t_A 5 LIKVGLVGI-GAQMQENLLPSLLQMQDIRIVAACDSDL--ERARRVH---RFISDIPVLDNVPAMLNQ----VPLDAVVM 74 (359)
T ss_dssp CEEEEEECC-SHHHHHTHHHHHHTCTTEEEEEEECSSH--HHHGGGG---GTSCSCCEESSHHHHHHH----SCCSEEEE
T ss_pred cceEEEECC-CHHHHHHHHHHHHhCCCcEEEEEEcCCH--HHHHHHH---HhcCCCcccCCHHHHhcC----CCCCEEEE
Confidence 589999995 999995 889998889999999999641 1122232 133 56789999999975 57899999
Q ss_pred cCChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccCchHHHHHHHHHHHHhc-CCCCCeEEEe
Q 025154 113 FTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISAS-FHYKNVEIVE 190 (257)
Q Consensus 113 FT~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spNfSlGvnll~~~a~~l~-~~~~DiEIiE 190 (257)
+|.+..+.+.+..|+++|++|+|.++ ..+.++.++|.++|+++|+.+.++.|+-.-=. +.++-+.+. +..-++..++
T Consensus 75 ~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~-~~~~k~~i~~g~iG~i~~~~ 153 (359)
T 3m2t_A 75 AGPPQLHFEMGLLAMSKGVNVFVEKPPCATLEELETLIDAARRSDVVSGVGMNFKFARP-VRQLREMTQVDEFGETLHIQ 153 (359)
T ss_dssp CSCHHHHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHTCCEEECCHHHHCHH-HHHHHHHHTSGGGCCEEEEE
T ss_pred cCCcHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEEEEEecccCcHH-HHHHHHHHHCCCCCCeEEEE
Confidence 99999999999999999999999999 88999999999999999988887766544322 222222222 1234666666
Q ss_pred ccC
Q 025154 191 SRP 193 (257)
Q Consensus 191 ~HH 193 (257)
.+.
T Consensus 154 ~~~ 156 (359)
T 3m2t_A 154 LNH 156 (359)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 48
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=99.49 E-value=1.2e-13 Score=124.41 Aligned_cols=121 Identities=17% Similarity=0.232 Sum_probs=101.6
Q ss_pred CceEEEEcCCChHHHH-HHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEc
Q 025154 35 NIKVIINGAVKEIGRA-AVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~-i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDF 113 (257)
|+||+|+|+ |+||+. +++.+...++++|++++|+.. ..+..++ ...+++.|+|++++++ ++|+|+.+
T Consensus 6 ~~~igiIG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~--~~~~~~a---~~~~~~~~~~~~~ll~------~~D~V~i~ 73 (308)
T 3uuw_A 6 NIKMGMIGL-GSIAQKAYLPILTKSERFEFVGAFTPNK--VKREKIC---SDYRIMPFDSIESLAK------KCDCIFLH 73 (308)
T ss_dssp CCEEEEECC-SHHHHHHTHHHHTSCSSSEEEEEECSCH--HHHHHHH---HHHTCCBCSCHHHHHT------TCSEEEEC
T ss_pred cCcEEEEec-CHHHHHHHHHHHHhCCCeEEEEEECCCH--HHHHHHH---HHcCCCCcCCHHHHHh------cCCEEEEe
Confidence 689999995 999996 898888889999999999641 1122232 2346667999999995 79999999
Q ss_pred CChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccCchH
Q 025154 114 TDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTLSI 167 (257)
Q Consensus 114 T~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spNfSl 167 (257)
|.+..+.+.+..|+++|+||++.++ ..+.++.++|.++|+++|+.+.++-|+-.
T Consensus 74 tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~ 128 (308)
T 3uuw_A 74 SSTETHYEIIKILLNLGVHVYVDKPLASTVSQGEELIELSTKKNLNLMVGFNRRF 128 (308)
T ss_dssp CCGGGHHHHHHHHHHTTCEEEECSSSSSSHHHHHHHHHHHHHHTCCEEECCGGGG
T ss_pred CCcHhHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHcCCEEEEeecccc
Confidence 9999999999999999999999988 78899999999999999998887776544
No 49
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=99.49 E-value=2.9e-13 Score=124.78 Aligned_cols=131 Identities=16% Similarity=0.122 Sum_probs=108.2
Q ss_pred CCceEEEEcCCChHHHH-HHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEE
Q 025154 34 SNIKVIINGAVKEIGRA-AVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVID 112 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~-i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvID 112 (257)
.|+||||+|+ |+||+. +++.+...++++|++++|+.. ..+.+. -.++++|+|+++++++ .++|+|+.
T Consensus 4 ~~~rvgiiG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~--~~~~~~-----~~~~~~~~~~~~ll~~----~~vD~V~i 71 (358)
T 3gdo_A 4 DTIKVGILGY-GLSGSVFHGPLLDVLDEYQISKIMTSRT--EEVKRD-----FPDAEVVHELEEITND----PAIELVIV 71 (358)
T ss_dssp TCEEEEEECC-SHHHHHTTHHHHTTCTTEEEEEEECSCH--HHHHHH-----CTTSEEESSTHHHHTC----TTCCEEEE
T ss_pred CcceEEEEcc-CHHHHHHHHHHHhhCCCeEEEEEEcCCH--HHHHhh-----CCCCceECCHHHHhcC----CCCCEEEE
Confidence 4689999995 999996 888888889999999999642 111111 1267889999999974 57999999
Q ss_pred cCChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccCc--hHHHHHHHHHH
Q 025154 113 FTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTL--SIGSILLQQAA 176 (257)
Q Consensus 113 FT~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spNf--SlGvnll~~~a 176 (257)
+|.+..+.+.+..|+++|++|++.+| ..+.++.++|.++|+++|+.+.++.|+ .-.+..++++.
T Consensus 72 ~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i 138 (358)
T 3gdo_A 72 TTPSGLHYEHTMACIQAGKHVVMEKPMTATAEEGETLKRAADEKGVLLSVYHNRRWDNDFLTIKKLI 138 (358)
T ss_dssp CSCTTTHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGSHHHHHHHHHH
T ss_pred cCCcHHHHHHHHHHHHcCCeEEEecCCcCCHHHHHHHHHHHHHcCCeEEEeeecccCHHHHHHHHHH
Confidence 99999999999999999999999999 889999999999999999999988884 44444455554
No 50
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=99.47 E-value=3.2e-13 Score=122.27 Aligned_cols=144 Identities=15% Similarity=0.067 Sum_probs=109.5
Q ss_pred ceEEEEcCCChHHHHH-HHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCee-eecCHHHHHhccccCCCccEEEEc
Q 025154 36 IKVIINGAVKEIGRAA-VIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIP-VMSDLTMVLGSISQSKARAVVIDF 113 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i-~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~-v~~dl~~~l~~~~~~~~~DVvIDF 113 (257)
|||+|+|+ |+||+.+ ++.+.+ +++++++++|+.. ..+..+. ...+++ +++|+++++++ .++|+|+.+
T Consensus 1 ~~vgiiG~-G~~g~~~~~~~l~~-~~~~~vav~d~~~--~~~~~~~---~~~g~~~~~~~~~~~l~~----~~~D~V~i~ 69 (332)
T 2glx_A 1 NRWGLIGA-STIAREWVIGAIRA-TGGEVVSMMSTSA--ERGAAYA---TENGIGKSVTSVEELVGD----PDVDAVYVS 69 (332)
T ss_dssp CEEEEESC-CHHHHHTHHHHHHH-TTCEEEEEECSCH--HHHHHHH---HHTTCSCCBSCHHHHHTC----TTCCEEEEC
T ss_pred CeEEEEcc-cHHHHHhhhHHhhc-CCCeEEEEECCCH--HHHHHHH---HHcCCCcccCCHHHHhcC----CCCCEEEEe
Confidence 68999995 9999998 888877 8999999999641 1122222 134564 78999999863 469999999
Q ss_pred CChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccCchH--HHHHHHHHHHHhcCCCCCeEEEe
Q 025154 114 TDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTLSI--GSILLQQAAISASFHYKNVEIVE 190 (257)
Q Consensus 114 T~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spNfSl--Gvnll~~~a~~l~~~~~DiEIiE 190 (257)
|.|..+.+.+..|+++|++|++.++ ..+.++.++|.++|+++|+.++.+.|+-. ++.-++++.+. +..-++.-++
T Consensus 70 tp~~~h~~~~~~al~~Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i~~--g~iG~i~~v~ 147 (332)
T 2glx_A 70 TTNELHREQTLAAIRAGKHVLCEKPLAMTLEDAREMVVAAREAGVVLGTNHHLRNAAAHRAMRDAIAE--GRIGRPIAAR 147 (332)
T ss_dssp SCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCCGGGSHHHHHHHHHHHT--TTTSSEEEEE
T ss_pred CChhHhHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCEEEEeehhhcCHHHHHHHHHHHc--CCCCCeEEEE
Confidence 9999999999999999999999986 78899999999999999999988877543 44444444421 1233555555
Q ss_pred cc
Q 025154 191 SR 192 (257)
Q Consensus 191 ~H 192 (257)
.+
T Consensus 148 ~~ 149 (332)
T 2glx_A 148 VF 149 (332)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 51
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=99.47 E-value=7.9e-13 Score=120.43 Aligned_cols=128 Identities=13% Similarity=0.122 Sum_probs=102.5
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhc---cc--cCCCcc
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGS---IS--QSKARA 108 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~---~~--~~~~~D 108 (257)
.|+||||+|+.|.||+.+++.+... +.+|++++|+...- ..+.. .-.++++|+|++++++. +. ++.++|
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~~-~~~lvav~d~~~~~---~~~~~--~~~~~~~~~~~~~ll~~~~~l~~~~~~~vD 75 (318)
T 3oa2_A 2 HMKNFALIGAAGYIAPRHMRAIKDT-GNCLVSAYDINDSV---GIIDS--ISPQSEFFTEFEFFLDHASNLKRDSATALD 75 (318)
T ss_dssp -CCEEEEETTTSSSHHHHHHHHHHT-TCEEEEEECSSCCC---GGGGG--TCTTCEEESSHHHHHHHHHHHTTSTTTSCC
T ss_pred CceEEEEECCCcHHHHHHHHHHHhC-CCEEEEEEcCCHHH---HHHHh--hCCCCcEECCHHHHHHhhhhhhhccCCCCc
Confidence 3899999996578999999988865 89999999964211 12221 12367889999999820 00 015899
Q ss_pred EEEEcCChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccCchH
Q 025154 109 VVIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTLSI 167 (257)
Q Consensus 109 VvIDFT~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spNfSl 167 (257)
+|+..|.+..+.+++..|+++|+||++.+| ..+.++.++|.++|+++|+.++.+.|+-.
T Consensus 76 ~V~I~tP~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~ 135 (318)
T 3oa2_A 76 YVSICSPNYLHYPHIAAGLRLGCDVICEKPLVPTPEMLDQLAVIERETDKRLYNILQLRH 135 (318)
T ss_dssp EEEECSCGGGHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHTCCEEECCGGGG
T ss_pred EEEECCCcHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHhCCEEEEEEhhhc
Confidence 999999999999999999999999999999 88999999999999999998888777543
No 52
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=99.47 E-value=1.8e-13 Score=124.10 Aligned_cols=125 Identities=21% Similarity=0.244 Sum_probs=100.8
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCee--eecCHHHHHhccccCCCccEEEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIP--VMSDLTMVLGSISQSKARAVVID 112 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~--v~~dl~~~l~~~~~~~~~DVvID 112 (257)
++||+|+|+ |+||+.+++.+.+.++++|++++|+... .+.. .|++ .++++.+. .++|+||+
T Consensus 9 ~irv~IIG~-G~iG~~~~~~l~~~~~~elvav~d~~~~--~~~~-------~g~~~~~~~~l~~~-------~~~DvVii 71 (304)
T 3bio_A 9 KIRAAIVGY-GNIGRYALQALREAPDFEIAGIVRRNPA--EVPF-------ELQPFRVVSDIEQL-------ESVDVALV 71 (304)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHCTTEEEEEEECC----------------CCTTSCEESSGGGS-------SSCCEEEE
T ss_pred CCEEEEECC-hHHHHHHHHHHhcCCCCEEEEEEcCCHH--HHHH-------cCCCcCCHHHHHhC-------CCCCEEEE
Confidence 689999995 9999999999988899999999986421 1111 2333 24444433 37999999
Q ss_pred cCChHhHHHHHHHHHHcCCCeEEeCC--CCCHHHHHHHHHHhhhcCceEEEccCchHHHHHHHHHH
Q 025154 113 FTDASTVYDNVKQATAFGMRSVVYVP--HIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAA 176 (257)
Q Consensus 113 FT~p~~~~~~~~~a~~~Gi~vViGTT--G~s~e~~~~L~~~a~~~gipvl~spNfSlGvnll~~~a 176 (257)
+|.+..+.+++..|+++|+++++.++ +.+.++.++|.+++++.|+.++++.+|..|+..+.++.
T Consensus 72 atp~~~h~~~~~~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g~~~~v~~~~~p~~~~~~~~i 137 (304)
T 3bio_A 72 CSPSREVERTALEILKKGICTADSFDIHDGILALRRSLGDAAGKSGAAAVIASGWDPGSDSVVRTL 137 (304)
T ss_dssp CSCHHHHHHHHHHHHTTTCEEEECCCCGGGHHHHHHHHHHHHHHHTCEEECSCBBTTBHHHHHHHH
T ss_pred CCCchhhHHHHHHHHHcCCeEEECCCCCCCCHHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHHH
Confidence 99999999999999999999999986 67889999999999999998899999999988665554
No 53
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=99.46 E-value=8.6e-13 Score=125.12 Aligned_cols=156 Identities=11% Similarity=0.053 Sum_probs=114.1
Q ss_pred CCCCCCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCC---eeeec----CHHHHHhccc
Q 025154 30 NPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLE---IPVMS----DLTMVLGSIS 102 (257)
Q Consensus 30 ~~~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~g---v~v~~----dl~~~l~~~~ 102 (257)
.++-.++||+|+| +|.||+.+++.+...++++|++++|+.. ..+..++..-.+.| +.+|+ |+++++++
T Consensus 15 ~~~~~~~rvgiIG-~G~~g~~h~~~l~~~~~~~lvav~d~~~--~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~-- 89 (444)
T 2ixa_A 15 DFNPKKVRIAFIA-VGLRGQTHVENMARRDDVEIVAFADPDP--YMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKD-- 89 (444)
T ss_dssp ----CCEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSCH--HHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTC--
T ss_pred cCCCCCceEEEEe-cCHHHHHHHHHHHhCCCcEEEEEEeCCH--HHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcC--
Confidence 3444579999999 5999999999998889999999999641 11222211000123 56788 99999974
Q ss_pred cCCCccEEEEcCChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccCc--hHHHHHHHHHHHHh
Q 025154 103 QSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTL--SIGSILLQQAAISA 179 (257)
Q Consensus 103 ~~~~~DVvIDFT~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spNf--SlGvnll~~~a~~l 179 (257)
.++|+|+..|.+..+.+++..|+++|++|++.++ ..+.++.++|.++|+++|+.+++..|+ .-++..+.++.+.
T Consensus 90 --~~vD~V~i~tp~~~h~~~~~~al~aGkhV~~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~- 166 (444)
T 2ixa_A 90 --KNIDAVFVSSPWEWHHEHGVAAMKAGKIVGMEVSGAITLEECWDYVKVSEQTGVPLMALENVCYRRDVMAILNMVRK- 166 (444)
T ss_dssp --TTCCEEEECCCGGGHHHHHHHHHHTTCEEEECCCCCSSHHHHHHHHHHHHHHCCCEEECCGGGGCHHHHHHHHHHHT-
T ss_pred --CCCCEEEEcCCcHHHHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEeccccCHHHHHHHHHHHc-
Confidence 5799999999999999999999999999999998 688999999999999999888887664 3343334443321
Q ss_pred cCCCCCeEEEeccCC
Q 025154 180 SFHYKNVEIVESRPN 194 (257)
Q Consensus 180 ~~~~~DiEIiE~HH~ 194 (257)
+..-++.-++.+..
T Consensus 167 -G~iG~i~~v~~~~~ 180 (444)
T 2ixa_A 167 -GMFGELVHGTGGYQ 180 (444)
T ss_dssp -TTTCSEEEEEECCB
T ss_pred -CCCCCeEEEEEEEe
Confidence 13457777776544
No 54
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=99.45 E-value=1.7e-13 Score=125.51 Aligned_cols=146 Identities=14% Similarity=0.098 Sum_probs=109.7
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCc-------EEEEEEecCCCCcchhhhhcCCCCCCe-eeecCHHHHHhccccCCC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGM-------EVAGAIDSHSVGEDIGMVCDMEQPLEI-PVMSDLTMVLGSISQSKA 106 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~-------eLvg~vd~~~~g~d~g~~~g~~~~~gv-~v~~dl~~~l~~~~~~~~ 106 (257)
++||||+|+ |.||+.+++.+...|++ +|++++|+.. ..+..++ .++++ .+|+|+++++++ .+
T Consensus 6 klrvgiIG~-G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~--~~a~~~a---~~~g~~~~~~d~~~ll~~----~~ 75 (390)
T 4h3v_A 6 NLGIGLIGY-AFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDA--EAVRAAA---GKLGWSTTETDWRTLLER----DD 75 (390)
T ss_dssp EEEEEEECH-HHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSH--HHHHHHH---HHHTCSEEESCHHHHTTC----TT
T ss_pred cCcEEEEcC-CHHHHHHHHHHHhCccccccccCceEEEEEcCCH--HHHHHHH---HHcCCCcccCCHHHHhcC----CC
Confidence 589999995 99999999988877654 8999999641 1122222 23455 479999999975 68
Q ss_pred ccEEEEcCChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHH---hhhcCceEEEccCchH--HHHHHHHHHHHhc
Q 025154 107 RAVVIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAF---CDKASMGCLIAPTLSI--GSILLQQAAISAS 180 (257)
Q Consensus 107 ~DVvIDFT~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~---a~~~gipvl~spNfSl--Gvnll~~~a~~l~ 180 (257)
+|+|+..|.+..+.+.+..|+++|+||+|++| +.+.+|.++|.++ ++++|+.+.+.-|+-. .+..++++.+.
T Consensus 76 iDaV~I~tP~~~H~~~~~~al~aGkhVl~EKPla~t~~ea~~l~~~~~~~~~~g~~~~v~~~~R~~p~~~~~k~~i~~-- 153 (390)
T 4h3v_A 76 VQLVDVCTPGDSHAEIAIAALEAGKHVLCEKPLANTVAEAEAMAAAAAKAAAGGIRSMVGFTYRRVPAIALARKLVAD-- 153 (390)
T ss_dssp CSEEEECSCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHHHTTCCEEEECGGGGSHHHHHHHHHHHT--
T ss_pred CCEEEEeCChHHHHHHHHHHHHcCCCceeecCcccchhHHHHHHHHHHHHHhcCCceEEEeeeccCchHHHHHHHHHc--
Confidence 99999999999999999999999999999999 8889998888655 6668888888877644 33334444322
Q ss_pred CCCCCeEEEecc
Q 025154 181 FHYKNVEIVESR 192 (257)
Q Consensus 181 ~~~~DiEIiE~H 192 (257)
+..-++.-++.+
T Consensus 154 g~iG~i~~v~~~ 165 (390)
T 4h3v_A 154 GKIGTVRHVRAQ 165 (390)
T ss_dssp TSSCSEEEEEEE
T ss_pred CCCCcceeeEEE
Confidence 234566666543
No 55
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=99.45 E-value=1.5e-13 Score=127.18 Aligned_cols=147 Identities=14% Similarity=0.179 Sum_probs=111.8
Q ss_pred CCceEEEEcCCChHHHH-HH----HHHHhcCCcEEE---------EEEecCCCCcchhhhhcCCCCCCee-eecCHHHHH
Q 025154 34 SNIKVIINGAVKEIGRA-AV----IAVTKARGMEVA---------GAIDSHSVGEDIGMVCDMEQPLEIP-VMSDLTMVL 98 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~-i~----~~i~~~~~~eLv---------g~vd~~~~g~d~g~~~g~~~~~gv~-v~~dl~~~l 98 (257)
.+|||+|+|++|.||+. ++ +.+...++++|+ +++|+.. ..+..++ ..++++ +|+|+++++
T Consensus 5 ~~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~--~~a~~~a---~~~~~~~~~~~~~~ll 79 (383)
T 3oqb_A 5 QRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSA--EKVEALA---KRFNIARWTTDLDAAL 79 (383)
T ss_dssp EEEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSS--HHHHHHH---HHTTCCCEESCHHHHH
T ss_pred ceeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCH--HHHHHHH---HHhCCCcccCCHHHHh
Confidence 46999999966999998 88 888888877765 5777541 1222333 245674 799999999
Q ss_pred hccccCCCccEEEEcCChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccCch--HHHHHHHHH
Q 025154 99 GSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTLS--IGSILLQQA 175 (257)
Q Consensus 99 ~~~~~~~~~DVvIDFT~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spNfS--lGvnll~~~ 175 (257)
++ .++|+|+.+|.+..+.+++..|+++|+||++.+| +.+.++.++|.++|+++|+.+.++.|+- -.+..++++
T Consensus 80 ~~----~~iD~V~i~tp~~~h~~~~~~al~~Gk~V~~EKP~a~~~~~~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~~~~ 155 (383)
T 3oqb_A 80 AD----KNDTMFFDAATTQARPGLLTQAINAGKHVYCEKPIATNFEEALEVVKLANSKGVKHGTVQDKLFLPGLKKIAFL 155 (383)
T ss_dssp HC----SSCCEEEECSCSSSSHHHHHHHHTTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGSHHHHHHHHH
T ss_pred cC----CCCCEEEECCCchHHHHHHHHHHHCCCeEEEcCCCCCCHHHHHHHHHHHHHcCCeEEEEeccccCHHHHHHHHH
Confidence 75 5799999999999999999999999999999998 7899999999999999999988888743 333334444
Q ss_pred HHHhcCCCCCeEEEec
Q 025154 176 AISASFHYKNVEIVES 191 (257)
Q Consensus 176 a~~l~~~~~DiEIiE~ 191 (257)
.+. +..-++.-++.
T Consensus 156 i~~--g~iG~i~~~~~ 169 (383)
T 3oqb_A 156 RDS--GFFGRILSVRG 169 (383)
T ss_dssp HHT--TTTSSEEEEEE
T ss_pred HHc--CCCCCcEEEEE
Confidence 321 12345655554
No 56
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=99.44 E-value=1.5e-13 Score=128.44 Aligned_cols=119 Identities=16% Similarity=0.270 Sum_probs=98.4
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcC-CcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEE
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKAR-GMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVID 112 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~-~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvID 112 (257)
.++||+|+| +| +|+.+++.+.+.+ +++|+|++|+.. ..+.+++ +.+|++.|+|++++++ ++|+++.
T Consensus 6 ~~~rv~VvG-~G-~g~~h~~a~~~~~~~~elvav~~~~~--~~a~~~a---~~~gv~~~~~~~~l~~------~~D~v~i 72 (372)
T 4gmf_A 6 PKQRVLIVG-AK-FGEMYLNAFMQPPEGLELVGLLAQGS--ARSRELA---HAFGIPLYTSPEQITG------MPDIACI 72 (372)
T ss_dssp -CEEEEEEC-ST-TTHHHHHTTSSCCTTEEEEEEECCSS--HHHHHHH---HHTTCCEESSGGGCCS------CCSEEEE
T ss_pred CCCEEEEEe-hH-HHHHHHHHHHhCCCCeEEEEEECCCH--HHHHHHH---HHhCCCEECCHHHHhc------CCCEEEE
Confidence 378999999 58 8999999887765 699999999642 2233344 3678999999999985 6998887
Q ss_pred cCChHhH----HHHHHHHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCch
Q 025154 113 FTDASTV----YDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLS 166 (257)
Q Consensus 113 FT~p~~~----~~~~~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfS 166 (257)
.|.+..+ .+.++.|+++|++|+++++ ++.+|.++|.++|+++|+.+.+..|+-
T Consensus 73 ~~p~~~h~~~~~~~a~~al~aGkhVl~EKP-l~~~ea~~l~~~A~~~g~~~~v~~~yr 129 (372)
T 4gmf_A 73 VVRSTVAGGAGTQLARHFLARGVHVIQEHP-LHPDDISSLQTLAQEQGCCYWINTFYP 129 (372)
T ss_dssp CCC--CTTSHHHHHHHHHHHTTCEEEEESC-CCHHHHHHHHHHHHHHTCCEEEECSGG
T ss_pred ECCCcccchhHHHHHHHHHHcCCcEEEecC-CCHHHHHHHHHHHHHcCCEEEEcCccc
Confidence 8765555 8999999999999999999 899999999999999999999988774
No 57
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=99.44 E-value=4.2e-13 Score=125.34 Aligned_cols=152 Identities=15% Similarity=0.113 Sum_probs=113.4
Q ss_pred CCCceEEEEcCCCh---HHHHHHHHHHhcCCcEEEE-EEecCCCCcchhhhhcCCCCCCe---eeecCHHHHHhccc-cC
Q 025154 33 QSNIKVIINGAVKE---IGRAAVIAVTKARGMEVAG-AIDSHSVGEDIGMVCDMEQPLEI---PVMSDLTMVLGSIS-QS 104 (257)
Q Consensus 33 ~~~ikV~V~Ga~Gr---MG~~i~~~i~~~~~~eLvg-~vd~~~~g~d~g~~~g~~~~~gv---~v~~dl~~~l~~~~-~~ 104 (257)
-.++||||+|+ |+ ||+.++..+...++++|++ ++|+.. ..+.+++ ..+|+ .+|+|+++++++-. .+
T Consensus 10 m~~~rvgiiG~-G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~--~~a~~~a---~~~g~~~~~~~~~~~~ll~~~~~~~ 83 (398)
T 3dty_A 10 PQPIRWAMVGG-GSQSQIGYIHRCAALRDNTFVLVAGAFDIDP--IRGSAFG---EQLGVDSERCYADYLSMFEQEARRA 83 (398)
T ss_dssp CSCEEEEEEEC-CTTCSSHHHHHHHHHGGGSEEEEEEECCSSH--HHHHHHH---HHTTCCGGGBCSSHHHHHHHHTTCT
T ss_pred cCcceEEEEcC-CccchhHHHHHHHHhhCCCeEEEEEEeCCCH--HHHHHHH---HHhCCCcceeeCCHHHHHhcccccC
Confidence 34799999995 99 9999999988888999998 567531 1122222 24566 58999999996200 00
Q ss_pred CCccEEEEcCChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccCchHHH--HHHHHHHHHhcC
Q 025154 105 KARAVVIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTLSIGS--ILLQQAAISASF 181 (257)
Q Consensus 105 ~~~DVvIDFT~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spNfSlGv--nll~~~a~~l~~ 181 (257)
.++|+|+..|.+..+.+++..|+++|++|++.++ ..+.++.++|.++|+++|+.+.++.|+-.-= ..++++.+. +
T Consensus 84 ~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~--G 161 (398)
T 3dty_A 84 DGIQAVSIATPNGTHYSITKAALEAGLHVVCEKPLCFTVEQAENLRELSHKHNRIVGVTYGYAGHQLIEQAREMIAA--G 161 (398)
T ss_dssp TCCSEEEEESCGGGHHHHHHHHHHTTCEEEECSCSCSCHHHHHHHHHHHHHTTCCEEECCGGGGSHHHHHHHHHHHT--T
T ss_pred CCCCEEEECCCcHHHHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHHhc--C
Confidence 2499999999999999999999999999999999 7899999999999999999998887765432 224443321 1
Q ss_pred CCCCeEEEecc
Q 025154 182 HYKNVEIVESR 192 (257)
Q Consensus 182 ~~~DiEIiE~H 192 (257)
..-++..++.+
T Consensus 162 ~iG~i~~v~~~ 172 (398)
T 3dty_A 162 ELGDVRMVHMQ 172 (398)
T ss_dssp TTCSEEEEEEE
T ss_pred CCCCeEEEEEE
Confidence 33466666653
No 58
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=99.43 E-value=4.6e-13 Score=122.18 Aligned_cols=147 Identities=10% Similarity=0.039 Sum_probs=108.8
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCC--CCcchhhhhcCCCCCC--eeeecCHHHHHhccccCCCccE
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS--VGEDIGMVCDMEQPLE--IPVMSDLTMVLGSISQSKARAV 109 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~--~g~d~g~~~g~~~~~g--v~v~~dl~~~l~~~~~~~~~DV 109 (257)
+|+||+|+|+ |.+|+.+++.+ .++++|++++|+.. ..+...+... +.+ .++|+|+++++++ .++|+
T Consensus 1 M~~rvgiiG~-G~~~~~~~~~l--~~~~~lvav~d~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ll~~----~~vD~ 70 (337)
T 3ip3_A 1 MSLKICVIGS-SGHFRYALEGL--DEECSITGIAPGVPEEDLSKLEKAIS---EMNIKPKKYNNWWEMLEK----EKPDI 70 (337)
T ss_dssp -CEEEEEECS-SSCHHHHHTTC--CTTEEEEEEECSSTTCCCHHHHHHHH---TTTCCCEECSSHHHHHHH----HCCSE
T ss_pred CceEEEEEcc-chhHHHHHHhc--CCCcEEEEEecCCchhhHHHHHHHHH---HcCCCCcccCCHHHHhcC----CCCCE
Confidence 3789999995 88888888876 89999999999642 1222232221 223 4789999999974 57999
Q ss_pred EEEcCChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCce--EEEccCch--HHHHHHHHHHHHhcCCCC
Q 025154 110 VIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMG--CLIAPTLS--IGSILLQQAAISASFHYK 184 (257)
Q Consensus 110 vIDFT~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gip--vl~spNfS--lGvnll~~~a~~l~~~~~ 184 (257)
|+..|.+..+.+.+..|+++|+||++.++ ..+.++.++|.++|+++|+. +.++-|+- -.+.-++++.+. +..-
T Consensus 71 V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~~~v~~~~R~~p~~~~~k~~i~~--g~iG 148 (337)
T 3ip3_A 71 LVINTVFSLNGKILLEALERKIHAFVEKPIATTFEDLEKIRSVYQKVRNEVFFTAMFGIRYRPHFLTAKKLVSE--GAVG 148 (337)
T ss_dssp EEECSSHHHHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTTTCCEEECCGGGGSHHHHHHHHHHHH--TTTS
T ss_pred EEEeCCcchHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCceEEEecccccCCHHHHHHHHHHhc--CCcc
Confidence 99999999999999999999999999999 78899999999999999988 55554432 233334444321 1334
Q ss_pred CeEEEecc
Q 025154 185 NVEIVESR 192 (257)
Q Consensus 185 DiEIiE~H 192 (257)
++..++..
T Consensus 149 ~i~~i~~~ 156 (337)
T 3ip3_A 149 EIRLVNTQ 156 (337)
T ss_dssp SEEEEEEE
T ss_pred ceEEEEEE
Confidence 66666543
No 59
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=99.40 E-value=9.3e-13 Score=124.90 Aligned_cols=148 Identities=11% Similarity=0.053 Sum_probs=112.4
Q ss_pred CCceEEEEcC---CChHHHHHHHHHHhc-CCcEEEEEEecCCCCcchhhhhcCCCCCCe---eeecCHHHHHhccccCCC
Q 025154 34 SNIKVIINGA---VKEIGRAAVIAVTKA-RGMEVAGAIDSHSVGEDIGMVCDMEQPLEI---PVMSDLTMVLGSISQSKA 106 (257)
Q Consensus 34 ~~ikV~V~Ga---~GrMG~~i~~~i~~~-~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv---~v~~dl~~~l~~~~~~~~ 106 (257)
.++||+|+|+ .|.||+.+++.+... ++++|++++|+.. ..+..++ +.+++ .+|+|+++++++ .+
T Consensus 19 ~~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~--~~~~~~a---~~~g~~~~~~~~~~~~ll~~----~~ 89 (438)
T 3btv_A 19 APIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKI--ETSIATI---QRLKLSNATAFPTLESFASS----ST 89 (438)
T ss_dssp CCEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSH--HHHHHHH---HHTTCTTCEEESSHHHHHHC----SS
T ss_pred CCCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCH--HHHHHHH---HHcCCCcceeeCCHHHHhcC----CC
Confidence 4689999995 399999999999988 8999999999641 1112222 13344 489999999974 57
Q ss_pred ccEEEEcCChHhHHHHHHHHHHcC------CCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccCch--HHHHHHHHHHH
Q 025154 107 RAVVIDFTDASTVYDNVKQATAFG------MRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTLS--IGSILLQQAAI 177 (257)
Q Consensus 107 ~DVvIDFT~p~~~~~~~~~a~~~G------i~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spNfS--lGvnll~~~a~ 177 (257)
+|+|+.+|.+..+.+.+..|+++| ++|+++++ ..+.++.++|.++|+++|+.++++-|+- -.+.-++++.+
T Consensus 90 vD~V~i~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~ 169 (438)
T 3btv_A 90 IDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIYKAAAERGVQTIISLQGRKSPYILRAKELIS 169 (438)
T ss_dssp CSEEEECSCHHHHHHHHHHHHHHGGGCTTCCEEEEESSCCSSHHHHHHHHHHHHTTTCEEEEECGGGGCHHHHHHHHHHH
T ss_pred CCEEEEeCCcHHHHHHHHHHHHCCCCcccceeEEecCcccCCHHHHHHHHHHHHHcCCeEEEecccccCHHHHHHHHHHH
Confidence 999999999999999999999999 99999997 7889999999999999898888776643 34433444442
Q ss_pred HhcCCCCCeEEEecc
Q 025154 178 SASFHYKNVEIVESR 192 (257)
Q Consensus 178 ~l~~~~~DiEIiE~H 192 (257)
. +..-++.-++.+
T Consensus 170 ~--G~iG~i~~v~~~ 182 (438)
T 3btv_A 170 Q--GYIGDINSIEIA 182 (438)
T ss_dssp T--TTTCSEEEEEEE
T ss_pred c--CCCCCcEEEEEE
Confidence 1 123355555544
No 60
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=99.40 E-value=9.1e-13 Score=124.13 Aligned_cols=151 Identities=17% Similarity=0.136 Sum_probs=111.7
Q ss_pred CCceEEEEcCCCh---HHHHHHHHHHhcCCcEEEE-EEecCCCCcchhhhhcCCCCCCe---eeecCHHHHHhccc-cCC
Q 025154 34 SNIKVIINGAVKE---IGRAAVIAVTKARGMEVAG-AIDSHSVGEDIGMVCDMEQPLEI---PVMSDLTMVLGSIS-QSK 105 (257)
Q Consensus 34 ~~ikV~V~Ga~Gr---MG~~i~~~i~~~~~~eLvg-~vd~~~~g~d~g~~~g~~~~~gv---~v~~dl~~~l~~~~-~~~ 105 (257)
.++||+|+|+ |+ ||+.++..+...++++|++ ++|+.. ..+.+++ ..+|+ .+|+|+++++++-. ...
T Consensus 36 ~~~rvgiiG~-G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~--~~a~~~a---~~~g~~~~~~~~~~~~ll~~~~~~~~ 109 (417)
T 3v5n_A 36 KRIRLGMVGG-GSGAFIGAVHRIAARLDDHYELVAGALSSTP--EKAEASG---RELGLDPSRVYSDFKEMAIREAKLKN 109 (417)
T ss_dssp CCEEEEEESC-C--CHHHHHHHHHHHHTSCEEEEEEECCSSH--HHHHHHH---HHHTCCGGGBCSCHHHHHHHHHHCTT
T ss_pred CcceEEEEcC-CCchHHHHHHHHHHhhCCCcEEEEEEeCCCH--HHHHHHH---HHcCCCcccccCCHHHHHhcccccCC
Confidence 4689999995 99 9999999888888899997 667531 1122222 23456 58999999996200 002
Q ss_pred CccEEEEcCChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccCchHHH--HHHHHHHHHhcCC
Q 025154 106 ARAVVIDFTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTLSIGS--ILLQQAAISASFH 182 (257)
Q Consensus 106 ~~DVvIDFT~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spNfSlGv--nll~~~a~~l~~~ 182 (257)
++|+|+..|.+..+.+++..|+++|++|+|.++ ..+.++.++|.++|+++|+.++++.|+-.-= ..++++.+. +.
T Consensus 110 ~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~--G~ 187 (417)
T 3v5n_A 110 GIEAVAIVTPNHVHYAAAKEFLKRGIHVICDKPLTSTLADAKKLKKAADESDALFVLTHNYTGYPMVRQAREMIEN--GD 187 (417)
T ss_dssp CCSEEEECSCTTSHHHHHHHHHTTTCEEEEESSSCSSHHHHHHHHHHHHHCSSCEEEECGGGGSHHHHHHHHHHHT--TT
T ss_pred CCcEEEECCCcHHHHHHHHHHHhCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEEEEEecccCCHHHHHHHHHHhc--CC
Confidence 599999999999999999999999999999999 8899999999999999999999888765433 224444321 23
Q ss_pred CCCeEEEecc
Q 025154 183 YKNVEIVESR 192 (257)
Q Consensus 183 ~~DiEIiE~H 192 (257)
.-++..++.+
T Consensus 188 iG~i~~v~~~ 197 (417)
T 3v5n_A 188 IGAVRLVQME 197 (417)
T ss_dssp TCSEEEEEEE
T ss_pred CCCeEEEEEE
Confidence 3466666553
No 61
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=99.39 E-value=3.4e-12 Score=116.16 Aligned_cols=144 Identities=11% Similarity=0.073 Sum_probs=109.3
Q ss_pred CceEEEEcCCChHHH-HHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCC-CeeeecCHHHHHhccccCCCccEEEE
Q 025154 35 NIKVIINGAVKEIGR-AAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPL-EIPVMSDLTMVLGSISQSKARAVVID 112 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~-~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~-gv~v~~dl~~~l~~~~~~~~~DVvID 112 (257)
|+||+|+|+ |.||. .+++.+. .++++|++++|+.. ..+..++ ..+ ++++|+|+++++++ .++|+|+.
T Consensus 4 ~~rvgiiG~-G~~~~~~~~~~l~-~~~~~lvav~d~~~--~~~~~~a---~~~~~~~~~~~~~~ll~~----~~~D~V~i 72 (336)
T 2p2s_A 4 KIRFAAIGL-AHNHIYDMCQQLI-DAGAELAGVFESDS--DNRAKFT---SLFPSVPFAASAEQLITD----ASIDLIAC 72 (336)
T ss_dssp CCEEEEECC-SSTHHHHHHHHHH-HTTCEEEEEECSCT--TSCHHHH---HHSTTCCBCSCHHHHHTC----TTCCEEEE
T ss_pred ccEEEEECC-ChHHHHHhhhhhc-CCCcEEEEEeCCCH--HHHHHHH---HhcCCCcccCCHHHHhhC----CCCCEEEE
Confidence 689999995 99996 5777664 68999999999642 1112222 123 56789999999974 57999999
Q ss_pred cCChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccCchH--H-HHHHHHHHHHhcCCCCCeEE
Q 025154 113 FTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTLSI--G-SILLQQAAISASFHYKNVEI 188 (257)
Q Consensus 113 FT~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spNfSl--G-vnll~~~a~~l~~~~~DiEI 188 (257)
.|.+..+.+.+..|+++|+||++.++ ..+.++.++|.++|+++|+.++++-|+-. . +.-++++.+. +..-++.-
T Consensus 73 ~tp~~~h~~~~~~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~~~~~i~~--g~iG~i~~ 150 (336)
T 2p2s_A 73 AVIPCDRAELALRTLDAGKDFFTAKPPLTTLEQLDAVQRRVAETGRKFAVYFNERINVDSALFAGELVQR--GEIGRVIQ 150 (336)
T ss_dssp CSCGGGHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHCCCEEECCTTTTTCHHHHHHHHHHHT--TTTSSEEE
T ss_pred eCChhhHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeeccccCcHHHHHHHHHHhC--CCCCceEE
Confidence 99999999999999999999999998 68889999999999999998888777643 3 5445555432 12345555
Q ss_pred Eec
Q 025154 189 VES 191 (257)
Q Consensus 189 iE~ 191 (257)
++.
T Consensus 151 v~~ 153 (336)
T 2p2s_A 151 TMG 153 (336)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 62
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=99.38 E-value=2.2e-12 Score=119.15 Aligned_cols=124 Identities=16% Similarity=0.230 Sum_probs=99.4
Q ss_pred CCceEEEEcCCChHHHHHHHH--HHhcCCcEEEEEEecCCCC--cchhhhhcCCCCCCeeeecCHHHHHhccccCC-Ccc
Q 025154 34 SNIKVIINGAVKEIGRAAVIA--VTKARGMEVAGAIDSHSVG--EDIGMVCDMEQPLEIPVMSDLTMVLGSISQSK-ARA 108 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~--i~~~~~~eLvg~vd~~~~g--~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~-~~D 108 (257)
..+||.|.|++|||++.+++. +.++++.++|+++++...| +++. .|. ...|+|+|++++++.++ . ++|
T Consensus 9 ~~tkviV~G~~Gk~~~~ml~~~~~~~r~~~~vVagV~P~~~g~~~~v~--~G~-~~~Gvpvy~sv~ea~~~----~p~~D 81 (334)
T 3mwd_B 9 RHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFY--WGH-KEILIPVFKNMADAMRK----HPEVD 81 (334)
T ss_dssp TTCCEEEESCCHHHHHHHHHHHHHTTCSSCSEEEEECTTSCSEEEEEE--ETT-EEEEEEEESSHHHHHHH----CTTCC
T ss_pred CCCeEEEECCchHHHHHHHHhcccccCCCceEEEEEcCCCCCccceEe--ccC-ccCCceeeCCHHHHhhc----CCCCc
Confidence 347999999999999988876 5677899999999986532 4331 232 24689999999998863 2 579
Q ss_pred EEEEcCChHhHHHHHHHHHH-cCCCeEEe-CCCCCHHHHHHHHHHhhhcCceEEEccCc
Q 025154 109 VVIDFTDASTVYDNVKQATA-FGMRSVVY-VPHIQLETVSALSAFCDKASMGCLIAPTL 165 (257)
Q Consensus 109 VvIDFT~p~~~~~~~~~a~~-~Gi~vViG-TTG~s~e~~~~L~~~a~~~gipvl~spNf 165 (257)
++|+|+.|..+.+.+..+++ +|++.|+. |+||++++.++|.++|+++|+ -++.||-
T Consensus 82 laVi~vp~~~a~~ai~ea~~~~Gv~~vViiT~G~~e~~~~~l~~~a~~~g~-rliGPNc 139 (334)
T 3mwd_B 82 VLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKLIKKADQKGV-TIIGPAT 139 (334)
T ss_dssp EEEECCCTTTHHHHHHHHTTSTTCCEEEECCSCCCHHHHHHHHHHHHHHTC-EEECSSC
T ss_pred EEEEecCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCC-EEEccCC
Confidence 99999999998887766666 99988877 889999888899999999997 5667773
No 63
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=99.35 E-value=1e-12 Score=121.01 Aligned_cols=139 Identities=15% Similarity=0.133 Sum_probs=105.1
Q ss_pred CceEEEEcCCChHHHHHHHHHHhc--------CCcEEEEEEecCCC--C-cchhhhhcCCCCCCeeeec--CHHHHHhcc
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKA--------RGMEVAGAIDSHSV--G-EDIGMVCDMEQPLEIPVMS--DLTMVLGSI 101 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~--------~~~eLvg~vd~~~~--g-~d~g~~~g~~~~~gv~v~~--dl~~~l~~~ 101 (257)
||||+|+| +|.||+.+++.+.+. ++++|++++|+... . .+..++.... .....+++ |+++++++
T Consensus 2 mirvgIiG-~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~-~~~~~~~~~~d~~~ll~~- 78 (327)
T 3do5_A 2 MIKIAIVG-FGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMK-RETGMLRDDAKAIEVVRS- 78 (327)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHH-HHHSSCSBCCCHHHHHHH-
T ss_pred cEEEEEEe-ccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhh-ccCccccCCCCHHHHhcC-
Confidence 89999999 599999999999887 89999999996421 1 1222221100 01123555 99999975
Q ss_pred ccCCCccEEEEcCChHhH----HHHHHHHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCchHHHHHHHHHHH
Q 025154 102 SQSKARAVVIDFTDASTV----YDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAI 177 (257)
Q Consensus 102 ~~~~~~DVvIDFT~p~~~----~~~~~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfSlGvnll~~~a~ 177 (257)
.++|||||+|.+..+ .+++..|+++|++||+...+.-..+.++|.++|+++|+.+++-++..-|.-++..+-+
T Consensus 79 ---~~iDvVv~~tp~~~h~~~a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~g~~~~~ea~v~~g~Pii~~l~~ 155 (327)
T 3do5_A 79 ---ADYDVLIEASVTRVDGGEGVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNGVRLMYEATVGGAMPVVKLAKR 155 (327)
T ss_dssp ---SCCSEEEECCCCC----CHHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHTTCCEECGGGSSTTSCCHHHHHT
T ss_pred ---CCCCEEEECCCCcccchhHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhhCCcEEEEEEeeecCHHHHHHHH
Confidence 689999999977765 8999999999999999877655567889999999999999998888888766655544
Q ss_pred Hh
Q 025154 178 SA 179 (257)
Q Consensus 178 ~l 179 (257)
.+
T Consensus 156 ~l 157 (327)
T 3do5_A 156 YL 157 (327)
T ss_dssp TT
T ss_pred Hh
Confidence 34
No 64
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=99.34 E-value=5.1e-12 Score=114.50 Aligned_cols=130 Identities=12% Similarity=0.093 Sum_probs=99.6
Q ss_pred CceEEEEcCCChHHH-HHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeee-ecCHHHHHhccccCCCccEEEE
Q 025154 35 NIKVIINGAVKEIGR-AAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-MSDLTMVLGSISQSKARAVVID 112 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~-~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v-~~dl~~~l~~~~~~~~~DVvID 112 (257)
|+||+|+|+ |+||+ .+++.+...++++|+ ++|+.. ..+..++ ...+++. +.+..++++ .++|+|+.
T Consensus 2 ~~~igiIG~-G~ig~~~~~~~l~~~~~~~l~-v~d~~~--~~~~~~a---~~~g~~~~~~~~~~~l~-----~~~D~V~i 69 (323)
T 1xea_A 2 SLKIAMIGL-GDIAQKAYLPVLAQWPDIELV-LCTRNP--KVLGTLA---TRYRVSATCTDYRDVLQ-----YGVDAVMI 69 (323)
T ss_dssp CEEEEEECC-CHHHHHTHHHHHTTSTTEEEE-EECSCH--HHHHHHH---HHTTCCCCCSSTTGGGG-----GCCSEEEE
T ss_pred CcEEEEECC-CHHHHHHHHHHHHhCCCceEE-EEeCCH--HHHHHHH---HHcCCCccccCHHHHhh-----cCCCEEEE
Confidence 689999995 99998 599988878899999 888641 1122222 1345553 444444554 48999999
Q ss_pred cCChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccCc--hHHHHHHHHHH
Q 025154 113 FTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTL--SIGSILLQQAA 176 (257)
Q Consensus 113 FT~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spNf--SlGvnll~~~a 176 (257)
+|.|..+.+.+..|+++|++|++.++ ..+.++.++|.++|+++|+.++.+-|+ .-.+..++++.
T Consensus 70 ~tp~~~h~~~~~~al~~Gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i 136 (323)
T 1xea_A 70 HAATDVHSTLAAFFLHLGIPTFVDKPLAASAQECENLYELAEKHHQPLYVGFNRRHIPLYNQHLSEL 136 (323)
T ss_dssp CSCGGGHHHHHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCCEEEECGGGCCHHHHHHCHHH
T ss_pred ECCchhHHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHhcCCeEEEeeccccCHHHHHHHHHH
Confidence 99999999999999999999999987 678899999999999999988877664 44555455554
No 65
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=99.32 E-value=1.7e-12 Score=119.51 Aligned_cols=148 Identities=20% Similarity=0.177 Sum_probs=108.2
Q ss_pred CceEEEEcCCChHHHHHHHHHHhc------CCcEEEEEEecCCC--C--cchhhhhcCCCCCC-ee--eecCHHHHHhcc
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKA------RGMEVAGAIDSHSV--G--EDIGMVCDMEQPLE-IP--VMSDLTMVLGSI 101 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~------~~~eLvg~vd~~~~--g--~d~g~~~g~~~~~g-v~--v~~dl~~~l~~~ 101 (257)
++||+|+| +|.||+.+++.+.+. ++++|+++.|+... . .|...+.....+.+ ++ .+ |+++++.+
T Consensus 4 ~irVgIiG-~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~~~~~~~-d~~e~l~~- 80 (325)
T 3ing_A 4 EIRIILMG-TGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGRISDRAF-SGPEDLMG- 80 (325)
T ss_dssp EEEEEEEC-CSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHSCSCSSBC-CSGGGGTT-
T ss_pred eEEEEEEc-CcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcCCCCcccC-CHHHHhcC-
Confidence 58999999 599999999999876 78999999996421 1 12222211000111 11 23 66777764
Q ss_pred ccCCCccEEEEcCCh----HhHHHHHHHHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCchHHHHHHHHHHH
Q 025154 102 SQSKARAVVIDFTDA----STVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAI 177 (257)
Q Consensus 102 ~~~~~~DVvIDFT~p----~~~~~~~~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfSlGvnll~~~a~ 177 (257)
.++|||||+|.+ +...+++..|+++|+|||+...++..++.++|.++|+++|+.++|-+++.-|+-++..+-+
T Consensus 81 ---~~iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVVtaNK~~la~~~~eL~~lA~~~g~~~~~Ea~vg~giPii~~l~~ 157 (325)
T 3ing_A 81 ---EAADLLVDCTPASRDGVREYSLYRMAFESGMNVVTANKSGLANKWHDIMDSANQNSKYIRYEATVAGGVPLFSVLDY 157 (325)
T ss_dssp ---SCCSEEEECCCCCSSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTCCEECGGGSSTTSCCHHHHHH
T ss_pred ---CCCCEEEECCCCccccchHHHHHHHHHHCCCeEEEcCchhHHHHHHHHHHHHHHcCCeEEEEeeecccCHHHHHHHH
Confidence 689999999965 4447999999999999999888777788899999999999999999999988876655544
Q ss_pred HhcCCCCCeEEEe
Q 025154 178 SASFHYKNVEIVE 190 (257)
Q Consensus 178 ~l~~~~~DiEIiE 190 (257)
.+. ...|.=++
T Consensus 158 ~l~--g~~I~~i~ 168 (325)
T 3ing_A 158 SIL--PSKVKRFR 168 (325)
T ss_dssp TCT--TCCEEEEE
T ss_pred Hhh--CCCeeEEE
Confidence 442 34554444
No 66
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=99.25 E-value=1e-11 Score=118.64 Aligned_cols=133 Identities=14% Similarity=0.171 Sum_probs=106.6
Q ss_pred CceEEEEcCCChHHHHHHHHHHh---------cCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTK---------ARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSK 105 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~---------~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~ 105 (257)
++||+|+| +|.||+.+++.+.+ .++++|++++|+.. .....+. .+..+++|+++++++ .
T Consensus 10 ~irIgIIG-~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~--~~~~~~~-----~~~~~~~d~~ell~d----~ 77 (444)
T 3mtj_A 10 PIHVGLLG-LGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNL--DKAEALA-----GGLPLTTNPFDVVDD----P 77 (444)
T ss_dssp CEEEEEEC-CHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCH--HHHHHHH-----TTCCEESCTHHHHTC----T
T ss_pred cccEEEEC-CCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCH--HHhhhhc-----ccCcccCCHHHHhcC----C
Confidence 47999999 59999999987764 27899999999642 1112222 145679999999975 6
Q ss_pred CccEEEEcCCh-HhHHHHHHHHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCchHHHHHHHHHHHHh
Q 025154 106 ARAVVIDFTDA-STVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISA 179 (257)
Q Consensus 106 ~~DVvIDFT~p-~~~~~~~~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfSlGvnll~~~a~~l 179 (257)
++|+|+++|.+ +.+.+++..|+++|+|||+..+.++.++.++|.++|+++|+.+++-++..-|+-++..+-+.+
T Consensus 78 diDvVve~tp~~~~h~~~~~~AL~aGKhVvtenkal~a~~~~eL~~~A~~~gv~l~~Ea~V~~giPii~~LrelL 152 (444)
T 3mtj_A 78 EIDIVVELIGGLEPARELVMQAIANGKHVVTANKHLVAKYGNEIFAAAQAKGVMVTFEAAVAGGIPIIKALREGL 152 (444)
T ss_dssp TCCEEEECCCSSTTHHHHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCCEECGGGSSTTSCHHHHHHTTT
T ss_pred CCCEEEEcCCCchHHHHHHHHHHHcCCEEEECCcccCHHHHHHHHHHHHHhCCeEEEEEeeeCChHHHHHHHHHH
Confidence 79999999975 899999999999999999998888888889999999999999988777777766655554444
No 67
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=99.24 E-value=1.9e-11 Score=108.81 Aligned_cols=115 Identities=15% Similarity=0.076 Sum_probs=94.9
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
-|||+++| +|.||+.+++. . ++||+++++ .+.+ ++++.+++|++++++ ++|+||+..
T Consensus 12 ~~rV~i~G-~GaIG~~v~~~---~-~leLv~v~~-~k~g-----------elgv~a~~d~d~lla------~pD~VVe~A 68 (253)
T 1j5p_A 12 HMTVLIIG-MGNIGKKLVEL---G-NFEKIYAYD-RISK-----------DIPGVVRLDEFQVPS------DVSTVVECA 68 (253)
T ss_dssp CCEEEEEC-CSHHHHHHHHH---S-CCSEEEEEC-SSCC-----------CCSSSEECSSCCCCT------TCCEEEECS
T ss_pred cceEEEEC-cCHHHHHHHhc---C-CcEEEEEEe-cccc-----------ccCceeeCCHHHHhh------CCCEEEECC
Confidence 48999999 69999999997 4 999999998 3322 226677899999884 799999999
Q ss_pred ChHhHHHHHHHHHHcCCCeEEeCCCC--CHHHHHHHHHHhhhcCceEEEccCchHHHHHH
Q 025154 115 DASTVYDNVKQATAFGMRSVVYVPHI--QLETVSALSAFCDKASMGCLIAPTLSIGSILL 172 (257)
Q Consensus 115 ~p~~~~~~~~~a~~~Gi~vViGTTG~--s~e~~~~L~~~a~~~gipvl~spNfSlGvnll 172 (257)
.++++.+++..++++|+++|+..+|. +++-.++|+++|+++|..+++.+----|.-.+
T Consensus 69 ~~~av~e~~~~iL~aG~dvv~~S~gaLad~~l~~~L~~aA~~gg~~l~vpSGAi~GlD~l 128 (253)
T 1j5p_A 69 SPEAVKEYSLQILKNPVNYIIISTSAFADEVFRERFFSELKNSPARVFFPSGAIGGLDVL 128 (253)
T ss_dssp CHHHHHHHHHHHTTSSSEEEECCGGGGGSHHHHHHHHHHHHTCSCEEECCCTTCCCHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEcChhhhcCHHHHHHHHHHHHHCCCeEEecCCcccchhHH
Confidence 99999999999999999999988874 56667899999999999987755555554333
No 68
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=99.22 E-value=9.1e-12 Score=114.60 Aligned_cols=139 Identities=18% Similarity=0.131 Sum_probs=101.8
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcC-------CcEEEEEEecCCC--Cc--chhhhhcCCCCCCee-eec---CHHHHHh
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKAR-------GMEVAGAIDSHSV--GE--DIGMVCDMEQPLEIP-VMS---DLTMVLG 99 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~-------~~eLvg~vd~~~~--g~--d~g~~~g~~~~~gv~-v~~---dl~~~l~ 99 (257)
++||+|+|+ |.||+.+++.+.+.+ +++|+++.|+... .. +..++.....+.+++ +++ |+++++
T Consensus 6 ~irvgIiG~-G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ll- 83 (331)
T 3c8m_A 6 TINLSIFGL-GNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKGSLDSLEYESISASEAL- 83 (331)
T ss_dssp EEEEEEECC-SHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTTCGGGCCSEECCHHHHH-
T ss_pred EEeEEEEec-CHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccCCcccccCCCCCHHHHh-
Confidence 589999995 999999999988766 6899999996421 01 111111000012332 566 999998
Q ss_pred ccccCCCccEEEEcCChH----hHHHHHHHHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCchHHHHHHHHH
Q 025154 100 SISQSKARAVVIDFTDAS----TVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQA 175 (257)
Q Consensus 100 ~~~~~~~~DVvIDFT~p~----~~~~~~~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfSlGvnll~~~ 175 (257)
+ .++|||||+|.+. .+.+++..|+++|+|||+....+..++.++|.++|+++|+.++|.++..-|+-++..+
T Consensus 84 ~----~~iDvVv~~t~~~~~~~~~~~~~~~AL~aGkhVvtanK~pla~~~~eL~~~A~~~gv~~~~ea~vg~giPii~~l 159 (331)
T 3c8m_A 84 A----RDFDIVVDATPASADGKKELAFYKETFENGKDVVTANKSGLANFWPEIMEYARSNNRRIRYEATVAGGVPLFSFI 159 (331)
T ss_dssp H----SSCSEEEECSCCCSSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTCCEECGGGSSTTSCCHHHH
T ss_pred C----CCCCEEEECCCCCCccchHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHHcCCEEEEEeecccccHHHHHH
Confidence 4 6899999999774 8899999999999999986444445778899999999999999988888775544444
Q ss_pred HHHh
Q 025154 176 AISA 179 (257)
Q Consensus 176 a~~l 179 (257)
-+.+
T Consensus 160 ~~~l 163 (331)
T 3c8m_A 160 DYSV 163 (331)
T ss_dssp HHHS
T ss_pred HHHh
Confidence 4334
No 69
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=99.22 E-value=1.6e-10 Score=105.35 Aligned_cols=115 Identities=13% Similarity=0.151 Sum_probs=95.1
Q ss_pred ceEEEE-cCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 36 IKVIIN-GAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 36 ikV~V~-Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
-.++|+ |++|++|+.+++.+.+ .++++++.+++...|.+ -.|+++|.+++++.++ ..+|++|.|+
T Consensus 14 ~siaVV~Gasg~~G~~~~~~l~~-~G~~~v~~VnP~~~g~~---------i~G~~vy~sl~el~~~----~~vD~avI~v 79 (305)
T 2fp4_A 14 NTKVICQGFTGKQGTFHSQQALE-YGTNLVGGTTPGKGGKT---------HLGLPVFNTVKEAKEQ----TGATASVIYV 79 (305)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHH-HTCEEEEEECTTCTTCE---------ETTEEEESSHHHHHHH----HCCCEEEECC
T ss_pred CcEEEEECCCCCHHHHHHHHHHH-CCCcEEEEeCCCcCcce---------ECCeeeechHHHhhhc----CCCCEEEEec
Confidence 347777 9999999999998765 57888888887533322 2479999999999853 3799999999
Q ss_pred ChHhHHHHHHHHHHcCCCe-EEeCCCCCHHHHHHHHHHhhhc-CceEEEccCc
Q 025154 115 DASTVYDNVKQATAFGMRS-VVYVPHIQLETVSALSAFCDKA-SMGCLIAPTL 165 (257)
Q Consensus 115 ~p~~~~~~~~~a~~~Gi~v-ViGTTG~s~e~~~~L~~~a~~~-gipvl~spNf 165 (257)
.|+.+.+.++.|++.|++. |+-|+|++.++..++.++++++ |+. ++.||.
T Consensus 80 P~~~~~~~~~e~i~~Gi~~iv~~t~G~~~~~~~~l~~~a~~~~gi~-liGPnc 131 (305)
T 2fp4_A 80 PPPFAAAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRLLRQGKTR-LIGPNC 131 (305)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHTTCSSCE-EECSSS
T ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCChHHHHHHHHHHHhcCCcE-EEeCCC
Confidence 9999999999999999998 6788899987777899999998 887 577885
No 70
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=99.04 E-value=7.1e-10 Score=103.12 Aligned_cols=126 Identities=15% Similarity=0.147 Sum_probs=90.3
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcC---CcEEEEEEecCCCCcchhhhhcCCCCC-CeeeecCHHHHHhc---------
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKAR---GMEVAGAIDSHSVGEDIGMVCDMEQPL-EIPVMSDLTMVLGS--------- 100 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~---~~eLvg~vd~~~~g~d~g~~~g~~~~~-gv~v~~dl~~~l~~--------- 100 (257)
.|+||+|+|+ |.||+.+++.+.+.+ +++|+++.|+.. . .+. .++ |+..++++++++++
T Consensus 3 k~i~vgIiG~-G~VG~~~~~~l~~~~~g~~~~vvaV~d~~~--~---~~~---~~~~gi~~~~~~~e~l~~~~~~~~did 73 (358)
T 1ebf_A 3 KVVNVAVIGA-GVVGSAFLDQLLAMKSTITYNLVLLAEAER--S---LIS---KDFSPLNVGSDWKAALAASTTKTLPLD 73 (358)
T ss_dssp SEEEEEEECC-SHHHHHHHHHHHHCCCSSEEEEEEEECSSB--E---EEC---SSCSCCSCTTCHHHHHHTCCCBCCCHH
T ss_pred ceEEEEEEec-CHHHHHHHHHHHhcCCCCCEEEEEEEECCh--h---hhc---cccCCCCccccHHHHHhcccCCCCCHH
Confidence 4699999995 999999999998776 689999998531 1 111 122 45555666666642
Q ss_pred -----cccCCCccEEEEcCChHhHHHHHHHHHHcCCCeEE--eCC-CCCHHHHHHHHHHhhhcCceEEEccCchHHH
Q 025154 101 -----ISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVV--YVP-HIQLETVSALSAFCDKASMGCLIAPTLSIGS 169 (257)
Q Consensus 101 -----~~~~~~~DVvIDFT~p~~~~~~~~~a~~~Gi~vVi--GTT-G~s~e~~~~L~~~a~~~gipvl~spNfSlGv 169 (257)
+.....+|||||.|....+.+....|+++|+|||+ -.+ ..+.++.++|. +|+++|+.++|-++..-|+
T Consensus 74 ~v~e~~~~~~~~DvVV~~t~~~~~a~~~~~AL~aGkhVVtaNkkpla~~~~~~~eL~-~A~~~gv~~~~Ea~vg~gi 149 (358)
T 1ebf_A 74 DLIAHLKTSPKPVILVDNTSSAYIAGFYTKFVENGISIATPNKKAFSSDLATWKALF-SNKPTNGFVYHEATVGAGL 149 (358)
T ss_dssp HHHHHHTTCSSCEEEEECSCCHHHHTTHHHHHHTTCEEECCCCGGGSSCHHHHHHHT-CCCTTCCCEECGGGTTTTS
T ss_pred HHHHHhhhccCCcEEEEcCCChHHHHHHHHHHHCCCeEEecCcccccCCHHHHHHHH-HHHHcCCEEEEccccccCC
Confidence 00001238999999766666666799999999998 333 45557888999 9999999988876666663
No 71
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=98.96 E-value=2.1e-09 Score=98.67 Aligned_cols=95 Identities=21% Similarity=0.242 Sum_probs=74.1
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhc---CC------------CCCCeeeecCHHHHHh
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCD---ME------------QPLEIPVMSDLTMVLG 99 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g---~~------------~~~gv~v~~dl~~~l~ 99 (257)
|+||||+|+ |+||+.+++++.+.|+++|+++.|+. .+.++.++. .. ...++.++.|+++++.
T Consensus 2 ~irVgIiG~-G~iG~~~~r~l~~~~~~elvav~d~~--~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~ 78 (334)
T 2czc_A 2 KVKVGVNGY-GTIGKRVAYAVTKQDDMELIGITKTK--PDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLE 78 (334)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHTCTTEEEEEEEESS--CSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHT
T ss_pred CcEEEEEeE-hHHHHHHHHHHhcCCCCEEEEEEcCC--HHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhcc
Confidence 689999996 99999999999999999999999863 222222221 00 0012356789999884
Q ss_pred ccccCCCccEEEEcCChHhHHHHHHHHHHcCCCeEEeCC
Q 025154 100 SISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVP 138 (257)
Q Consensus 100 ~~~~~~~~DVvIDFT~p~~~~~~~~~a~~~Gi~vViGTT 138 (257)
++|+|+++|.+..+.+++..++++|++|++..+
T Consensus 79 ------~vDvV~~aTp~~~h~~~a~~~l~aGk~Vi~sap 111 (334)
T 2czc_A 79 ------KVDIIVDATPGGIGAKNKPLYEKAGVKAIFQGG 111 (334)
T ss_dssp ------TCSEEEECCSTTHHHHHHHHHHHHTCEEEECTT
T ss_pred ------CCCEEEECCCccccHHHHHHHHHcCCceEeecc
Confidence 799999999889999999999999999887655
No 72
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10
Probab=98.92 E-value=3.2e-09 Score=98.61 Aligned_cols=118 Identities=13% Similarity=0.114 Sum_probs=94.9
Q ss_pred CceEEEEcCCChHHHHHHHHH---Hhc-CCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAV---TKA-RGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVV 110 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i---~~~-~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVv 110 (257)
.-|++|.| .|.||+..++.+ ... +.+++||++ +...|+|++++.+.. +.++++++|++++++ ..+|++
T Consensus 22 ~~~~vi~~-~g~~g~~~aKta~gllr~~~~~~iVgvi-~~~~Gkd~ge~~~g~-~~gipv~~d~~~al~-----~~~d~l 93 (350)
T 2g0t_A 22 GTPAAIVA-WGQLGTAHAKTTYGLLRHSRLFKPVCVV-AEHEGKMASDFVKPV-RYDVPVVSSVEKAKE-----MGAEVL 93 (350)
T ss_dssp TEEEEEEC-TTTTTSGGGHHHHHHHHHCSSEEEEEEE-SSCTTCBGGGTCC-C-CSCCBEESSHHHHHH-----TTCCEE
T ss_pred CCCEEEEe-CCCCChHHHHHHHHHHhhCCCCeEEEEe-ecCCCCcHHHhhCCC-CCCceeeCCHHHHHh-----cCCCEE
Confidence 45899998 699999888855 555 679999999 888999999998332 589999999999997 479998
Q ss_pred EEcC------ChHhHHHHHHHHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEE
Q 025154 111 IDFT------DASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLI 161 (257)
Q Consensus 111 IDFT------~p~~~~~~~~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~ 161 (257)
|--+ .|+...+.+..|+++|++||+|-..+ ..+..+|.++|+++|+.++-
T Consensus 94 vig~a~~gg~l~~~~~~~I~~Al~~G~nVvsglh~~-l~~~pel~~~A~~~Gv~i~d 149 (350)
T 2g0t_A 94 IIGVSNPGGYLEEQIATLVKKALSLGMDVISGLHFK-ISQQTEFLKIAHENGTRIID 149 (350)
T ss_dssp EECCCSCCHHHHHHHHHHHHHHHHTTCEEEECCCC---CCHHHHHHHHHHHTCCEEE
T ss_pred EEEecCCCCCCCHHHHHHHHHHHHcCCcEEeCChhh-hhCCHHHHHHHHHCCCEEEE
Confidence 8764 46788899999999999999988765 33446688899988776663
No 73
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=98.92 E-value=9.9e-10 Score=101.29 Aligned_cols=120 Identities=14% Similarity=0.136 Sum_probs=90.4
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcC--------CcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKAR--------GMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKA 106 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~--------~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~ 106 (257)
++||+|+| +|.||+.+++.+.+.+ +++|++++|+... + ...+ . ...+++|+++++ +
T Consensus 3 ~irvgIiG-~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~-~-~~~~-----~-~~~~~~d~~~ll-------~ 66 (332)
T 2ejw_A 3 ALKIALLG-GGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPR-K-PRAI-----P-QELLRAEPFDLL-------E 66 (332)
T ss_dssp EEEEEEEC-CSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTT-S-CCSS-----C-GGGEESSCCCCT-------T
T ss_pred eeEEEEEc-CCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHH-H-hhcc-----C-cccccCCHHHHh-------C
Confidence 58999999 5999999999998877 7899999996521 1 1101 0 123577888877 4
Q ss_pred ccEEEEcCChH-hHHHHHHHHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCchHHHHHH
Q 025154 107 RAVVIDFTDAS-TVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILL 172 (257)
Q Consensus 107 ~DVvIDFT~p~-~~~~~~~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfSlGvnll 172 (257)
+|||++.|... .+.++++.|+++|+|||+.......++.++|.++|+++ .++|.++..-|+-++
T Consensus 67 iDvVve~t~~~~~a~~~~~~AL~aGKhVVtaNkkpla~~~~eL~~~A~~~--~~~~Ea~vg~giPii 131 (332)
T 2ejw_A 67 ADLVVEAMGGVEAPLRLVLPALEAGIPLITANKALLAEAWESLRPFAEEG--LIYHEASVMAGTPAL 131 (332)
T ss_dssp CSEEEECCCCSHHHHHHHHHHHHTTCCEEECCHHHHHHSHHHHHHHHHTT--CEECGGGTTTTSSSH
T ss_pred CCEEEECCCCcHHHHHHHHHHHHcCCeEEECCchhHHHHHHHHHHHHHhC--CeEEEEEcccCCHHH
Confidence 89999999654 56889999999999999854333346778899999986 888887777774333
No 74
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=98.91 E-value=1.3e-08 Score=82.73 Aligned_cols=113 Identities=16% Similarity=0.108 Sum_probs=88.8
Q ss_pred CceEEEEcCC---ChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEE
Q 025154 35 NIKVIINGAV---KEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVI 111 (257)
Q Consensus 35 ~ikV~V~Ga~---GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvI 111 (257)
+.+|+|+|++ |+||..+++.+.+ .++++. .+++. + .+ -.|+++|.+++++.+ .+|++|
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~-~G~~v~-~Vnp~--~---~~------i~G~~~y~sl~~l~~------~vDlvv 82 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLE-HGYDVY-PVNPK--Y---EE------VLGRKCYPSVLDIPD------KIEVVD 82 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHH-TTCEEE-EECTT--C---SE------ETTEECBSSGGGCSS------CCSEEE
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHH-CCCEEE-EECCC--C---Ce------ECCeeccCCHHHcCC------CCCEEE
Confidence 4579999987 8999999998764 678733 34442 1 11 247889999999864 799999
Q ss_pred EcCChHhHHHHHHHHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCchHHHHH
Q 025154 112 DFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSIL 171 (257)
Q Consensus 112 DFT~p~~~~~~~~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfSlGvnl 171 (257)
-|+.++.+.+.++.|++.|++.++-++|+.. +++.++|+++|+. ++.|| ++|+..
T Consensus 83 i~vp~~~~~~vv~~~~~~gi~~i~~~~g~~~---~~l~~~a~~~Gi~-vvGpn-c~gv~~ 137 (144)
T 2d59_A 83 LFVKPKLTMEYVEQAIKKGAKVVWFQYNTYN---REASKKADEAGLI-IVANR-CMMREH 137 (144)
T ss_dssp ECSCHHHHHHHHHHHHHHTCSEEEECTTCCC---HHHHHHHHHTTCE-EEESC-CHHHHH
T ss_pred EEeCHHHHHHHHHHHHHcCCCEEEECCCchH---HHHHHHHHHcCCE-EEcCC-chhhcc
Confidence 9999999999999999999999888888752 4688889999998 45677 778754
No 75
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=98.89 E-value=5e-09 Score=96.71 Aligned_cols=94 Identities=16% Similarity=0.200 Sum_probs=70.5
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcC--------------CCCCCeeeecCHHHHHhc
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDM--------------EQPLEIPVMSDLTMVLGS 100 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~--------------~~~~gv~v~~dl~~~l~~ 100 (257)
|+||||+|+ |+||+.+++++.++++++|+++.|... +. ....+.. -...+++++++++++++
T Consensus 1 ~ikVgIiGa-G~iG~~~~r~L~~~p~~elvav~d~~~-~~-~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~- 76 (340)
T 1b7g_O 1 MVNVAVNGY-GTIGKRVADAIIKQPDMKLVGVAKTSP-NY-EAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIK- 76 (340)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHTCTTEEEEEEECSSC-SH-HHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHH-
T ss_pred CeEEEEEec-CHHHHHHHHHHHcCCCCEEEEEEcCCh-HH-HHHHHHhcCcceecCcCHHHHhcccccccccCHhHhhc-
Confidence 689999998 999999999999999999999998531 11 1111100 01234455556666654
Q ss_pred cccCCCccEEEEcCChHhHHHHHHHHHHcCCCeEEeC
Q 025154 101 ISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYV 137 (257)
Q Consensus 101 ~~~~~~~DVvIDFT~p~~~~~~~~~a~~~Gi~vViGT 137 (257)
++|+|+++|.+..+.+++..+++.|+++|.=+
T Consensus 77 -----~vDvV~~aTp~~~s~~~a~~~~~aG~kvV~~s 108 (340)
T 1b7g_O 77 -----TSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQG 108 (340)
T ss_dssp -----HCSEEEECCSTTHHHHHHHHHHHTTCEEEECT
T ss_pred -----CCCEEEECCCCchhHHHHHHHHHcCCeEEEeC
Confidence 68999999999999999999999999988643
No 76
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.89 E-value=1.9e-08 Score=81.33 Aligned_cols=113 Identities=13% Similarity=0.158 Sum_probs=86.2
Q ss_pred CCceEEEEcCC---ChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEE
Q 025154 34 SNIKVIINGAV---KEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVV 110 (257)
Q Consensus 34 ~~ikV~V~Ga~---GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVv 110 (257)
.+.+|+|+|++ |+||+.+++.+.+ .+++ +..+++. .. + -.|+++|.+++++.+ .+|++
T Consensus 13 ~p~~IavIGaS~~~g~~G~~~~~~L~~-~G~~-V~~vnp~--~~---~------i~G~~~~~s~~el~~------~vDlv 73 (138)
T 1y81_A 13 EFRKIALVGASKNPAKYGNIILKDLLS-KGFE-VLPVNPN--YD---E------IEGLKCYRSVRELPK------DVDVI 73 (138)
T ss_dssp -CCEEEEETCCSCTTSHHHHHHHHHHH-TTCE-EEEECTT--CS---E------ETTEECBSSGGGSCT------TCCEE
T ss_pred CCCeEEEEeecCCCCCHHHHHHHHHHH-CCCE-EEEeCCC--CC---e------ECCeeecCCHHHhCC------CCCEE
Confidence 35689999965 9999999999864 5787 4445543 11 1 147889999998874 79999
Q ss_pred EEcCChHhHHHHHHHHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCchHHHH
Q 025154 111 IDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSI 170 (257)
Q Consensus 111 IDFT~p~~~~~~~~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfSlGvn 170 (257)
|-+..++.+.+.++.|++.|++.++--++.. .+++.++|+++|+.+ +.|| ++|+.
T Consensus 74 ii~vp~~~v~~v~~~~~~~g~~~i~~~~~~~---~~~l~~~a~~~Gi~~-igpn-c~g~~ 128 (138)
T 1y81_A 74 VFVVPPKVGLQVAKEAVEAGFKKLWFQPGAE---SEEIRRFLEKAGVEY-SFGR-CIMVE 128 (138)
T ss_dssp EECSCHHHHHHHHHHHHHTTCCEEEECTTSC---CHHHHHHHHHHTCEE-ECSC-CHHHH
T ss_pred EEEeCHHHHHHHHHHHHHcCCCEEEEcCccH---HHHHHHHHHHCCCEE-EcCC-cceEE
Confidence 9999999999999999999998776655432 246788889989884 5777 77874
No 77
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=98.80 E-value=6e-09 Score=96.70 Aligned_cols=114 Identities=13% Similarity=0.083 Sum_probs=95.8
Q ss_pred eEEEEcCCChHHHHHHHHH---HhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEc
Q 025154 37 KVIINGAVKEIGRAAVIAV---TKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (257)
Q Consensus 37 kV~V~Ga~GrMG~~i~~~i---~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDF 113 (257)
|++|.+ .|.+|+..+|.+ ...++.++||++|++..|+|++++.|. +.++|++.|++++++ .++|++|.-
T Consensus 9 ~~vi~~-~g~~~~~~aKta~gl~r~~~~~iVgvid~~~~G~d~ge~~g~--~~gipi~~~l~~al~-----~~~d~lvig 80 (349)
T 2obn_A 9 RVAILL-HEGTTGTIGKTGLALLRYSEAPIVAVIDRNCAGQSLREITGI--YRYVPIVKSVEAALE-----YKPQVLVIG 80 (349)
T ss_dssp CEEEEC-TTTSSSSSCHHHHHHHHHCCSCEEEEECGGGTTSCHHHHHCC--CSCCCEESSHHHHGG-----GCCSEEEEC
T ss_pred cEEEEe-CCCCCcHHHHHhHHhhhcCCCcEEEEEeCCCCCCcHHHhcCC--cCCCCccCCHHHHHh-----CCCCEEEEE
Confidence 688888 699998887776 667789999999988889999999996 689999999999997 489999887
Q ss_pred C------ChHhHHHHHHHHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEE
Q 025154 114 T------DASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCL 160 (257)
Q Consensus 114 T------~p~~~~~~~~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl 160 (257)
+ .|+.+.+.+..|+++|++||.|--.+-. +..+|.++|++ |+.++
T Consensus 81 ~a~~gG~l~~~~~~~i~~Al~~G~~Vvsglh~~l~-~~pel~~~A~~-g~~i~ 131 (349)
T 2obn_A 81 IAPKGGGIPDDYWIELKTALQAGMSLVNGLHTPLA-NIPDLNALLQP-GQLIW 131 (349)
T ss_dssp CCCCCC-SCGGGHHHHHHHHHTTCEEEECSSSCCT-TCHHHHHHCCT-TCCEE
T ss_pred ecCCCCCCCHHHHHHHHHHHHcCCcEEeCccchhh-CCHHHHHHHHc-CCEEE
Confidence 5 4778899999999999999998764322 22458899998 88777
No 78
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=98.80 E-value=1.6e-08 Score=93.16 Aligned_cols=96 Identities=20% Similarity=0.228 Sum_probs=72.6
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCC---------------CCCCeeeecCHHHHHh
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDME---------------QPLEIPVMSDLTMVLG 99 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~---------------~~~gv~v~~dl~~~l~ 99 (257)
|+||||+|+ |+||+.+++++.++++++|+++.|... ......++.. ...++.+..++++++.
T Consensus 1 mikVgIiGa-G~iG~~l~r~L~~~~~~elvav~d~~~--~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~ 77 (337)
T 1cf2_P 1 MKAVAINGY-GTVGKRVADAIAQQDDMKVIGVSKTRP--DFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLD 77 (337)
T ss_dssp CEEEEEECC-STTHHHHHHHHHTSSSEEEEEEEESSC--SHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHH
T ss_pred CeEEEEEeE-CHHHHHHHHHHHcCCCcEEEEEEcCCh--hHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhc
Confidence 689999998 999999999999889999999988531 1111111100 0123444457777774
Q ss_pred ccccCCCccEEEEcCChHhHHHHHHHHHHcCCCeEEeCCC
Q 025154 100 SISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPH 139 (257)
Q Consensus 100 ~~~~~~~~DVvIDFT~p~~~~~~~~~a~~~Gi~vViGTTG 139 (257)
++|+|+++|.+..+.+++..++++|++||+-++.
T Consensus 78 ------~vDvV~~atp~~~~~~~a~~~l~aG~~VId~sp~ 111 (337)
T 1cf2_P 78 ------EADIVIDCTPEGIGAKNLKMYKEKGIKAIFQGGE 111 (337)
T ss_dssp ------TCSEEEECCSTTHHHHHHHHHHHHTCCEEECTTS
T ss_pred ------CCCEEEECCCchhhHHHHHHHHHcCCEEEEecCC
Confidence 7999999999999999999999999998876665
No 79
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=98.80 E-value=2.2e-08 Score=81.09 Aligned_cols=115 Identities=12% Similarity=0.079 Sum_probs=89.4
Q ss_pred CceEEEEcCC---ChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEE
Q 025154 35 NIKVIINGAV---KEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVI 111 (257)
Q Consensus 35 ~ikV~V~Ga~---GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvI 111 (257)
+-+|+|+|++ |+||..+++.+. ..+++ +..+++...+. + -.|+++|.+++++-+ .+|++|
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~-~~G~~-v~~vnp~~~~~---~------i~G~~~~~sl~el~~------~vDlav 75 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLR-EQGYR-VLPVNPRFQGE---E------LFGEEAVASLLDLKE------PVDILD 75 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHH-HTTCE-EEEECGGGTTS---E------ETTEECBSSGGGCCS------CCSEEE
T ss_pred CCEEEEECCCCCCCChHHHHHHHHH-HCCCE-EEEeCCCcccC---c------CCCEEecCCHHHCCC------CCCEEE
Confidence 4579999987 899999999876 46787 43455432121 1 137899999998764 799999
Q ss_pred EcCChHhHHHHHHHHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCchHHHHH
Q 025154 112 DFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSIL 171 (257)
Q Consensus 112 DFT~p~~~~~~~~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfSlGvnl 171 (257)
-|..++.+.+.++.|.+.|+..|+=.+|+.. +++.++|+++|+.++ .|| ++|+..
T Consensus 76 i~vp~~~~~~v~~~~~~~gi~~i~~~~g~~~---~~~~~~a~~~Gir~v-gpn-c~g~~~ 130 (140)
T 1iuk_A 76 VFRPPSALMDHLPEVLALRPGLVWLQSGIRH---PEFEKALKEAGIPVV-ADR-CLMVEH 130 (140)
T ss_dssp ECSCHHHHTTTHHHHHHHCCSCEEECTTCCC---HHHHHHHHHTTCCEE-ESC-CHHHHH
T ss_pred EEeCHHHHHHHHHHHHHcCCCEEEEcCCcCH---HHHHHHHHHcCCEEE-cCC-ccceEC
Confidence 9999999999999999999988887888753 468888999998755 577 788754
No 80
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=98.77 E-value=2.3e-08 Score=101.78 Aligned_cols=124 Identities=16% Similarity=0.225 Sum_probs=96.1
Q ss_pred CCCceEEEEcCCChHHHHHHHHHHhc-----CCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCc
Q 025154 33 QSNIKVIINGAVKEIGRAAVIAVTKA-----RGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKAR 107 (257)
Q Consensus 33 ~~~ikV~V~Ga~GrMG~~i~~~i~~~-----~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~ 107 (257)
+...||.|.|++|| .+.+.+... ++..+|+.+++...|.+...+.|. .+.|+++|.+++++.+. ..++
T Consensus 494 ~~~trviV~G~tg~---~~~~ml~~~~~~~~~~~~vVa~V~P~~~g~~~~~~~G~-~~~Gvp~y~sv~ea~~~---~p~~ 566 (829)
T 3pff_A 494 SRHTKAIVWGMQTR---AVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGH-KEILIPVFKNMADAMRK---HPEV 566 (829)
T ss_dssp CTTCCEEEESCCHH---HHHHHHHHHHHTTCSSCSEEEEECTTSCSEEEEEEETT-EEEEEEEESSHHHHHHH---CTTC
T ss_pred cCCCeEEEECCcHH---HHHHHHHhcccccCCCCcEEEEEcCCCCCccceEEecC-CcCCcccCCcHHHHhhc---cCCC
Confidence 33479999999988 555555543 788999999986544333322343 25689999999998862 0148
Q ss_pred cEEEEcCChHhHHHHHHHHHH-cCCCeEEe-CCCCCHHHHHHHHHHhhhcCceEEEccC
Q 025154 108 AVVIDFTDASTVYDNVKQATA-FGMRSVVY-VPHIQLETVSALSAFCDKASMGCLIAPT 164 (257)
Q Consensus 108 DVvIDFT~p~~~~~~~~~a~~-~Gi~vViG-TTG~s~e~~~~L~~~a~~~gipvl~spN 164 (257)
|++|.|..+..+.+.++.|++ .|++.++. |.||.+.+.++|.++|++.|+ -++.||
T Consensus 567 DlaVI~vP~~~v~~av~ea~~~~Gvk~~Viis~Gf~e~~~~~l~~~A~~~g~-rliGPN 624 (829)
T 3pff_A 567 DVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKLIKKADQKGV-TIIGPA 624 (829)
T ss_dssp CEEEECCCTTTHHHHHHHHTTSTTCCEEEECCSCCCHHHHHHHHHHHHHHTC-EEECSS
T ss_pred cEEEEeCCHHHHHHHHHHHHhhCCCCEEEEeCCCCCHHHHHHHHHHHHHcCC-EEEcCC
Confidence 999999999999999999999 99996655 779998888899999999987 566777
No 81
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=98.75 E-value=4.1e-09 Score=97.29 Aligned_cols=131 Identities=21% Similarity=0.241 Sum_probs=88.5
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeee--ecCHHHHHhccccCCCccEEEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV--MSDLTMVLGSISQSKARAVVID 112 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v--~~dl~~~l~~~~~~~~~DVvID 112 (257)
+|||+|+|| |+||+.+++.+.++.++.+ .|.. .+.+..+........+-+ .+++.+++. ++|+||.
T Consensus 16 ~mkilvlGa-G~vG~~~~~~L~~~~~v~~---~~~~--~~~~~~~~~~~~~~~~d~~d~~~l~~~~~------~~DvVi~ 83 (365)
T 3abi_A 16 HMKVLILGA-GNIGRAIAWDLKDEFDVYI---GDVN--NENLEKVKEFATPLKVDASNFDKLVEVMK------EFELVIG 83 (365)
T ss_dssp CCEEEEECC-SHHHHHHHHHHTTTSEEEE---EESC--HHHHHHHTTTSEEEECCTTCHHHHHHHHT------TCSEEEE
T ss_pred ccEEEEECC-CHHHHHHHHHHhcCCCeEE---EEcC--HHHHHHHhccCCcEEEecCCHHHHHHHHh------CCCEEEE
Confidence 589999997 9999999998876544333 3321 111111111000001111 223445553 7899999
Q ss_pred cCChHhHHHHHHHHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCchHHH-HH-HHHHHHHh
Q 025154 113 FTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGS-IL-LQQAAISA 179 (257)
Q Consensus 113 FT~p~~~~~~~~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfSlGv-nl-l~~~a~~l 179 (257)
...|......++.|+++|+++|- +|. ..++..+|.+.|+++|+.++...-|.-|+ |+ +.++++.+
T Consensus 84 ~~p~~~~~~v~~~~~~~g~~yvD-~s~-~~~~~~~l~~~a~~~g~~~i~~~G~~PG~~~~~a~~~~~~~ 150 (365)
T 3abi_A 84 ALPGFLGFKSIKAAIKSKVDMVD-VSF-MPENPLELRDEAEKAQVTIVFDAGFAPGLSNILMGRIFQEL 150 (365)
T ss_dssp CCCGGGHHHHHHHHHHHTCEEEE-CCC-CSSCGGGGHHHHHHTTCEEECCCBTTTBHHHHHHHHHHHHS
T ss_pred ecCCcccchHHHHHHhcCcceEe-eec-cchhhhhhhhhhccCCceeeecCCCCCchHHHHHHHHHHhc
Confidence 99999999999999999999874 444 33455678999999999999999999998 33 45555554
No 82
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=98.71 E-value=4.2e-08 Score=89.51 Aligned_cols=99 Identities=20% Similarity=0.243 Sum_probs=75.6
Q ss_pred CCceEEEEcCCChHHHHHHHHHHh-cCCcEEEEEEecCC-C-CcchhhhhcCCCCCCee-eecCHHHHHhccccCCCccE
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTK-ARGMEVAGAIDSHS-V-GEDIGMVCDMEQPLEIP-VMSDLTMVLGSISQSKARAV 109 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~-~~~~eLvg~vd~~~-~-g~d~g~~~g~~~~~gv~-v~~dl~~~l~~~~~~~~~DV 109 (257)
.++||+|+| +|.||+.+++.+.+ .+++++++++|+.. . ++...+ ..+++ .+++++++++.. ...++|+
T Consensus 3 ~~irVaIIG-~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~------~~g~~~~~~~~e~ll~~~-~~~~iDv 74 (312)
T 1nvm_B 3 QKLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQ------RMGVTTTYAGVEGLIKLP-EFADIDF 74 (312)
T ss_dssp SCEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHH------HTTCCEESSHHHHHHHSG-GGGGEEE
T ss_pred CCCEEEEEc-CcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHH------HcCCCcccCCHHHHHhcc-CCCCCcE
Confidence 368999999 59999999999866 89999999999642 1 222221 34554 356788887510 0025899
Q ss_pred EEEcCChHhHHHHHHHHHHc--CCCeEEeCCCC
Q 025154 110 VIDFTDASTVYDNVKQATAF--GMRSVVYVPHI 140 (257)
Q Consensus 110 vIDFT~p~~~~~~~~~a~~~--Gi~vViGTTG~ 140 (257)
|++.|.++.+.+++..|+++ |++|++.++-+
T Consensus 75 V~~atp~~~h~~~a~~al~a~~Gk~Vi~ekp~~ 107 (312)
T 1nvm_B 75 VFDATSASAHVQNEALLRQAKPGIRLIDLTPAA 107 (312)
T ss_dssp EEECSCHHHHHHHHHHHHHHCTTCEEEECSTTC
T ss_pred EEECCChHHHHHHHHHHHHhCCCCEEEEcCccc
Confidence 99999999999999999999 99999988743
No 83
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.71 E-value=5.3e-08 Score=79.21 Aligned_cols=113 Identities=12% Similarity=0.131 Sum_probs=84.2
Q ss_pred CceEEEEcCC---ChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEE
Q 025154 35 NIKVIINGAV---KEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVI 111 (257)
Q Consensus 35 ~ikV~V~Ga~---GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvI 111 (257)
+.+|+|+|++ |+||..+++.+.+ .+++ +..+++...|.. -.|+++|.+++++.+ .+|++|
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~-~G~~-v~~vnp~~~g~~---------i~G~~~~~sl~el~~------~~Dlvi 75 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLD-QGYH-VIPVSPKVAGKT---------LLGQQGYATLADVPE------KVDMVD 75 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHH-HTCC-EEEECSSSTTSE---------ETTEECCSSTTTCSS------CCSEEE
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHH-CCCE-EEEeCCcccccc---------cCCeeccCCHHHcCC------CCCEEE
Confidence 4579999986 8999999998865 4677 445555432221 247889999998764 799999
Q ss_pred EcCChHhHHHHHHHHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCchHHH
Q 025154 112 DFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGS 169 (257)
Q Consensus 112 DFT~p~~~~~~~~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfSlGv 169 (257)
-|+.++.+.+.+..|++.|+.-|+-.+|-. .+++.++|+++|+.++ .|| ++|+
T Consensus 76 i~vp~~~v~~v~~~~~~~g~~~i~i~~~~~---~~~l~~~a~~~Gi~~i-gpn-c~g~ 128 (145)
T 2duw_A 76 VFRNSEAAWGVAQEAIAIGAKTLWLQLGVI---NEQAAVLAREAGLSVV-MDR-CPAI 128 (145)
T ss_dssp CCSCSTHHHHHHHHHHHHTCCEEECCTTCC---CHHHHHHHHTTTCEEE-CSC-CHHH
T ss_pred EEeCHHHHHHHHHHHHHcCCCEEEEcCChH---HHHHHHHHHHcCCEEE-cCC-eeeE
Confidence 999999999999999999976554444422 2467888899888754 677 8887
No 84
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=98.66 E-value=9e-08 Score=76.13 Aligned_cols=111 Identities=14% Similarity=0.171 Sum_probs=88.4
Q ss_pred CceEEEEcCC---ChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEE
Q 025154 35 NIKVIINGAV---KEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVI 111 (257)
Q Consensus 35 ~ikV~V~Ga~---GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvI 111 (257)
|-+|+|+||+ +|.|..+.+.+.+. ++++.. +.+.. +++ .|.+.|.+++++- . +|+++
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~-g~~V~p-VnP~~-----~~i------~G~~~y~sl~dlp------~-vDlav 63 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSH-GHEFIP-VGRKK-----GEV------LGKTIINERPVIE------G-VDTVT 63 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHH-TCCEEE-ESSSC-----SEE------TTEECBCSCCCCT------T-CCEEE
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHC-CCeEEE-ECCCC-----CcC------CCeeccCChHHCC------C-CCEEE
Confidence 3459999997 78999999988754 677665 44431 222 4678898988764 4 99999
Q ss_pred EcCChHhHHHHHHHHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCchHHHHH
Q 025154 112 DFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSIL 171 (257)
Q Consensus 112 DFT~p~~~~~~~~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfSlGvnl 171 (257)
-|+.|+.+.+.++.|.+.|+..|+=++|+.. +++.+.|+++|+.++ +| ++|+.+
T Consensus 64 i~~p~~~v~~~v~e~~~~g~k~v~~~~G~~~---~e~~~~a~~~Girvv--~n-C~gv~l 117 (122)
T 3ff4_A 64 LYINPQNQLSEYNYILSLKPKRVIFNPGTEN---EELEEILSENGIEPV--IG-CTLVML 117 (122)
T ss_dssp ECSCHHHHGGGHHHHHHHCCSEEEECTTCCC---HHHHHHHHHTTCEEE--ES-CHHHHH
T ss_pred EEeCHHHHHHHHHHHHhcCCCEEEECCCCCh---HHHHHHHHHcCCeEE--CC-cCeEEe
Confidence 9999999999999999999999998899864 468888999999988 46 888854
No 85
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=98.60 E-value=1e-07 Score=89.43 Aligned_cols=147 Identities=11% Similarity=0.097 Sum_probs=95.5
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCc-EEEEEEecCCC-Ccch-hhhhcCCCCCCee-------eecCHHHHHhccccC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDSHSV-GEDI-GMVCDMEQPLEIP-------VMSDLTMVLGSISQS 104 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~-eLvg~vd~~~~-g~d~-g~~~g~~~~~gv~-------v~~dl~~~l~~~~~~ 104 (257)
|+||+|+|| |.+|+.+++.+.+.++. ..+.++++... .+.. .++.... ...+. -.+++++++++
T Consensus 1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~-~~~~~~~~~D~~d~~~l~~~l~~---- 74 (405)
T 4ina_A 1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKG-YGEIDITTVDADSIEELVALINE---- 74 (405)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTT-CCCCEEEECCTTCHHHHHHHHHH----
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhc-CCceEEEEecCCCHHHHHHHHHh----
Confidence 679999998 99999999999887765 44556665310 1111 1111000 00111 12356666652
Q ss_pred CCccEEEEcCChHhHHHHHHHHHHcCCCeEEeCCCCC--------HHHHHHHHHHhhhcCceEEEccCchHHHHH--HHH
Q 025154 105 KARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQ--------LETVSALSAFCDKASMGCLIAPTLSIGSIL--LQQ 174 (257)
Q Consensus 105 ~~~DVvIDFT~p~~~~~~~~~a~~~Gi~vViGTTG~s--------~e~~~~L~~~a~~~gipvl~spNfSlGvnl--l~~ 174 (257)
.++|+||..+.|......+..|++.|+++|- ++++. -.+...+.+.|+++|+.++..++|.-|+.- ...
T Consensus 75 ~~~DvVin~ag~~~~~~v~~a~l~~g~~vvD-~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~g~G~~PG~~~l~a~~ 153 (405)
T 4ina_A 75 VKPQIVLNIALPYQDLTIMEACLRTGVPYLD-TANYEHPDLAKFEYKEQWAFHDRYKEKGVMALLGSGFDPGVTNVFCAY 153 (405)
T ss_dssp HCCSEEEECSCGGGHHHHHHHHHHHTCCEEE-SSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEECCBTTTBHHHHHHHH
T ss_pred hCCCEEEECCCcccChHHHHHHHHhCCCEEE-ecCCCCcccchhhhHHHHHHHHHHHHhCCEEEEcCCCCccHHHHHHHH
Confidence 2489999999998889999999999999885 54432 123356888899999999999999999852 333
Q ss_pred HHHHhcCCCCCeEEEec
Q 025154 175 AAISASFHYKNVEIVES 191 (257)
Q Consensus 175 ~a~~l~~~~~DiEIiE~ 191 (257)
+++.. +.+++.++.
T Consensus 154 ~~~~~---~~~i~~i~i 167 (405)
T 4ina_A 154 AQKHY---FDEIHEIDI 167 (405)
T ss_dssp HHHHT---CSEEEEEEE
T ss_pred HHHhc---cCcccEEEE
Confidence 34332 335555554
No 86
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=98.55 E-value=3e-07 Score=84.89 Aligned_cols=99 Identities=15% Similarity=0.139 Sum_probs=70.0
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEe-cCCCCcchhhhhcCCC-------CCCeeeec-CHHHHHhccccC
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID-SHSVGEDIGMVCDMEQ-------PLEIPVMS-DLTMVLGSISQS 104 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd-~~~~g~d~g~~~g~~~-------~~gv~v~~-dl~~~l~~~~~~ 104 (257)
.|+||+|+||+|++|+.+++.+.++|+++|+++.+ ....|+...+..+... ...+.+.+ ++++ ++
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~----- 76 (350)
T 2ep5_A 3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTNYED-HK----- 76 (350)
T ss_dssp CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECSSGGG-GT-----
T ss_pred CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeCCHHH-hc-----
Confidence 46899999999999999999999999999999884 3334554433221100 01222322 3333 33
Q ss_pred CCccEEEEcCChHhHHHHHHHHHHcCCCeEEeCCC
Q 025154 105 KARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPH 139 (257)
Q Consensus 105 ~~~DVvIDFT~p~~~~~~~~~a~~~Gi~vViGTTG 139 (257)
++|+|+..+....+.+.+..+++.|+++|.-+..
T Consensus 77 -~vDvVf~atp~~~s~~~a~~~~~aG~~VId~s~~ 110 (350)
T 2ep5_A 77 -DVDVVLSALPNELAESIELELVKNGKIVVSNASP 110 (350)
T ss_dssp -TCSEEEECCCHHHHHHHHHHHHHTTCEEEECSST
T ss_pred -CCCEEEECCChHHHHHHHHHHHHCCCEEEECCcc
Confidence 7999997777788899999999999998876654
No 87
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=98.53 E-value=5.8e-07 Score=82.93 Aligned_cols=100 Identities=19% Similarity=0.150 Sum_probs=75.1
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecC---CCCcchhhhhc-CCCCCCeeeec--CHHHHHhccccCCCcc
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH---SVGEDIGMVCD-MEQPLEIPVMS--DLTMVLGSISQSKARA 108 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~---~~g~d~g~~~g-~~~~~gv~v~~--dl~~~l~~~~~~~~~D 108 (257)
|+||+|+||+|.+|+.+++.+.++|+++|+++..+. ..|+.+.++.. .....+..+.+ +.+++++ ++|
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~~~~~------~~D 77 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSP------GVD 77 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGGGTCT------TCS
T ss_pred ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHHHHhc------CCC
Confidence 799999999999999999999999999999998865 67777665421 10011344433 4555433 799
Q ss_pred EEEEcCChHhHHHHHHHHHHcCCCeEEeCCCC
Q 025154 109 VVIDFTDASTVYDNVKQATAFGMRSVVYVPHI 140 (257)
Q Consensus 109 VvIDFT~p~~~~~~~~~a~~~Gi~vViGTTG~ 140 (257)
+|+..+......+.+..+++.|+.+|-=+.-|
T Consensus 78 vvf~a~p~~~s~~~~~~~~~~g~~vIDlSa~f 109 (337)
T 3dr3_A 78 VVFLATAHEVSHDLAPQFLEAGCVVFDLSGAF 109 (337)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCEEEECSSTT
T ss_pred EEEECCChHHHHHHHHHHHHCCCEEEEcCCcc
Confidence 99966666677899999999999988766655
No 88
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=98.50 E-value=4.3e-07 Score=83.84 Aligned_cols=98 Identities=12% Similarity=0.042 Sum_probs=70.8
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCC-CCeeeecCHHHHHhccccCCCccEEEEc
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQP-LEIPVMSDLTMVLGSISQSKARAVVIDF 113 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~-~gv~v~~dl~~~l~~~~~~~~~DVvIDF 113 (257)
|+||+|+||+|++|+.+++.+.++++++|+++.+....|+...+..+.-.. ..+.+ .++++ +. ++|+|+..
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~-~~~~~-~~------~vDvV~~a 75 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKF-VPPEK-LE------PADILVLA 75 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBC-BCGGG-CC------CCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcccccc-cchhH-hc------CCCEEEEc
Confidence 689999999999999999999999999999988855455554432211000 12222 23443 32 79999988
Q ss_pred CChHhHHHHHHHHHHcCCCeEEeCCCC
Q 025154 114 TDASTVYDNVKQATAFGMRSVVYVPHI 140 (257)
Q Consensus 114 T~p~~~~~~~~~a~~~Gi~vViGTTG~ 140 (257)
+....+.+.+..+++.|+.+|.-+..|
T Consensus 76 ~g~~~s~~~a~~~~~aG~~VId~Sa~~ 102 (345)
T 2ozp_A 76 LPHGVFAREFDRYSALAPVLVDLSADF 102 (345)
T ss_dssp CCTTHHHHTHHHHHTTCSEEEECSSTT
T ss_pred CCcHHHHHHHHHHHHCCCEEEEcCccc
Confidence 877888999999999999977655434
No 89
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=98.41 E-value=7.7e-07 Score=76.97 Aligned_cols=112 Identities=14% Similarity=0.138 Sum_probs=77.7
Q ss_pred CceEEEEcCCChHHHHHHHHH-HhcCCcEEEEEEecC--CCCcchhhhhcCCCCCCeee--ecCHHHHHhccccCCCccE
Q 025154 35 NIKVIINGAVKEIGRAAVIAV-TKARGMEVAGAIDSH--SVGEDIGMVCDMEQPLEIPV--MSDLTMVLGSISQSKARAV 109 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i-~~~~~~eLvg~vd~~--~~g~d~g~~~g~~~~~gv~v--~~dl~~~l~~~~~~~~~DV 109 (257)
.+||+|+|| |.+|+.+++.+ ... +++++|++|.+ ..|+.+ .++++ +++++++++ + ++|+
T Consensus 80 ~~rV~IIGa-G~~G~~la~~~~~~~-g~~iVg~~D~dp~k~g~~i---------~gv~V~~~~dl~ell~----~-~ID~ 143 (211)
T 2dt5_A 80 KWGLCIVGM-GRLGSALADYPGFGE-SFELRGFFDVDPEKVGRPV---------RGGVIEHVDLLPQRVP----G-RIEI 143 (211)
T ss_dssp CEEEEEECC-SHHHHHHHHCSCCCS-SEEEEEEEESCTTTTTCEE---------TTEEEEEGGGHHHHST----T-TCCE
T ss_pred CCEEEEECc-cHHHHHHHHhHhhcC-CcEEEEEEeCCHHHHhhhh---------cCCeeecHHhHHHHHH----c-CCCE
Confidence 479999996 99999999863 234 89999999953 323222 23444 678888875 2 7999
Q ss_pred EEEcCChHhHHHHHHHHHHcCCCeEEe-CC-CCCHHHHHHHHHHhhhcCceEEEccCchHHHHHHHH
Q 025154 110 VIDFTDASTVYDNVKQATAFGMRSVVY-VP-HIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQ 174 (257)
Q Consensus 110 vIDFT~p~~~~~~~~~a~~~Gi~vViG-TT-G~s~e~~~~L~~~a~~~gipvl~spNfSlGvnll~~ 174 (257)
+|..++...+.+.+..|.+.|++.|+- |+ .++.+ + .-++...+++.....|..
T Consensus 144 ViIA~Ps~~~~ei~~~l~~aGi~~Ilnf~P~~l~vp----------~--~v~v~~vdl~~~l~~l~~ 198 (211)
T 2dt5_A 144 ALLTVPREAAQKAADLLVAAGIKGILNFAPVVLEVP----------K--EVAVENVDFLAGLTRLSF 198 (211)
T ss_dssp EEECSCHHHHHHHHHHHHHHTCCEEEECSSSCCCCC----------T--TSEEEECCSHHHHHHHHH
T ss_pred EEEeCCchhHHHHHHHHHHcCCCEEEECCcccccCC----------C--CcEEEecCHHHHHHHHHH
Confidence 998887777789999999999996544 54 33322 1 135666677766544433
No 90
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=98.38 E-value=6.3e-07 Score=83.22 Aligned_cols=135 Identities=19% Similarity=0.189 Sum_probs=93.1
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCC-ee----eecCHHHHHhccccCCCccE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLE-IP----VMSDLTMVLGSISQSKARAV 109 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~g-v~----v~~dl~~~l~~~~~~~~~DV 109 (257)
..||+|+|+ |+||+.+++.+.+. .++ .+.|+.. ..+..++. ..+ +. -.++++++++ ++|+
T Consensus 16 ~~~v~IiGa-G~iG~~ia~~L~~~--~~V-~V~~R~~--~~a~~la~---~~~~~~~d~~~~~~l~~ll~------~~Dv 80 (365)
T 2z2v_A 16 HMKVLILGA-GNIGRAIAWDLKDE--FDV-YIGDVNN--ENLEKVKE---FATPLKVDASNFDKLVEVMK------EFEL 80 (365)
T ss_dssp CCEEEEECC-SHHHHHHHHHHTTT--SEE-EEEESCH--HHHHHHTT---TSEEEECCTTCHHHHHHHHT------TCSC
T ss_pred CCeEEEEcC-CHHHHHHHHHHHcC--CeE-EEEECCH--HHHHHHHh---hCCeEEEecCCHHHHHHHHh------CCCE
Confidence 569999996 99999999988765 554 5667531 12223321 112 11 1245666664 7999
Q ss_pred EEEcCChHhHHHHHHHHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCchHHHH-H-HHHHHHHhcCCCCCeE
Q 025154 110 VIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSI-L-LQQAAISASFHYKNVE 187 (257)
Q Consensus 110 vIDFT~p~~~~~~~~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfSlGvn-l-l~~~a~~l~~~~~DiE 187 (257)
||..+.+..+.+.++.|++.|+++|- ++.. .++..+|.+.|+++|+.++....|.-|+. + ..++++.+ |++
T Consensus 81 VIn~~P~~~~~~v~~a~l~~G~~~vD-~s~~-~~~~~~l~~~Ak~aG~~~l~g~G~dPG~~~~~a~~~~~~~-----~v~ 153 (365)
T 2z2v_A 81 VIGALPGFLGFKSIKAAIKSKVDMVD-VSFM-PENPLELRDEAEKAQVTIVFDAGFAPGLSNILMGRIFQEL-----DLK 153 (365)
T ss_dssp EEECCCHHHHHHHHHHHHHTTCCEEE-CCCC-SSCGGGGHHHHHHTTCEEECSCBTTTBHHHHHHHHHHHHS-----CEE
T ss_pred EEECCChhhhHHHHHHHHHhCCeEEE-ccCC-cHHHHHHHHHHHHcCCEEEECCCCcchHHHHHHHHHHHhc-----CCC
Confidence 99998888788899999999999886 3333 33445788889999999998888888883 3 45555443 266
Q ss_pred EEec
Q 025154 188 IVES 191 (257)
Q Consensus 188 IiE~ 191 (257)
-++.
T Consensus 154 ~i~~ 157 (365)
T 2z2v_A 154 EGYI 157 (365)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5554
No 91
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=98.37 E-value=5.4e-07 Score=84.63 Aligned_cols=121 Identities=9% Similarity=0.023 Sum_probs=77.6
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCC-cEEEEEE-ecCC---------CCc------c---hhhhhc-CCCCCCeee--
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARG-MEVAGAI-DSHS---------VGE------D---IGMVCD-MEQPLEIPV-- 90 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~-~eLvg~v-d~~~---------~g~------d---~g~~~g-~~~~~gv~v-- 90 (257)
.|+||+|.|+||.+|+.+++.+.+.|+ ++++++. +++. .+. | ..++.. . ...++.+
T Consensus 3 ~m~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~ag~ni~~l~~~~~~f~~~~v~v~d~~~~~~l~~~l-~~~~~~v~~ 81 (388)
T 1r0k_A 3 QPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEAL-AGSSVEAAA 81 (388)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHT-TTCSSEEEE
T ss_pred CceEEEEECCCeEeHHHHHHHHHhCcCcEEEEEEEcCCCHHHHHHHHHHcCCcEEEEcChHHHHHHHHHh-ccCCcEEEe
Confidence 368999999999999999999998887 9999873 3210 000 0 000000 0 0011222
Q ss_pred -ecCHHHHHhccccCCCccEEEEcCChHhHHHHHHHHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEE
Q 025154 91 -MSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCL 160 (257)
Q Consensus 91 -~~dl~~~l~~~~~~~~~DVvIDFT~p~~~~~~~~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl 160 (257)
.+++.++++. . +|+||+.+.-.........|+++|++|++.-=......-+.|.++|+++|+.++
T Consensus 82 g~~~~~el~~~----~-iDvVV~ai~G~aGl~ptlaAi~aGK~VvlANKE~lv~~G~~l~~~A~~~gv~li 147 (388)
T 1r0k_A 82 GADALVEAAMM----G-ADWTMAAIIGCAGLKATLAAIRKGKTVALANKESLVSAGGLMIDAVREHGTTLL 147 (388)
T ss_dssp SHHHHHHHHTS----C-CSEEEECCCSGGGHHHHHHHHHTTSEEEECCSHHHHTTHHHHHHHHHHHTCEEE
T ss_pred CccHHHHHHcC----C-CCEEEEeCCCHHHHHHHHHHHHCCCEEEEeCcHHHHhhHHHHHHHHHHcCCEEE
Confidence 2234455542 4 999999986677888899999999999985211122223567788888776664
No 92
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=98.37 E-value=7.1e-07 Score=82.82 Aligned_cols=97 Identities=12% Similarity=0.115 Sum_probs=68.9
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCC-C--CCeeeecCHHHHHhccccCCCccEEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQ-P--LEIPVMSDLTMVLGSISQSKARAVVI 111 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~-~--~gv~v~~dl~~~l~~~~~~~~~DVvI 111 (257)
++||+|+||+|++|+.+++.+.++++++|+++.++...|+......+.-. . ..+.+. + ++.++ ++|+|+
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~~-~-~~~~~------~vDvVf 87 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVSV-K-DADFS------TVDAVF 87 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBCG-G-GCCGG------GCSEEE
T ss_pred CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcccccceec-c-hhHhc------CCCEEE
Confidence 48999999999999999999999999999998886555554443221100 0 112222 2 33332 689999
Q ss_pred EcCChHhHHHHHHHHHHcCCCeEEeCCCC
Q 025154 112 DFTDASTVYDNVKQATAFGMRSVVYVPHI 140 (257)
Q Consensus 112 DFT~p~~~~~~~~~a~~~Gi~vViGTTG~ 140 (257)
..+....+.+.+..+ +.|+.+|.-+..|
T Consensus 88 ~atp~~~s~~~a~~~-~aG~~VId~sa~~ 115 (359)
T 1xyg_A 88 CCLPHGTTQEIIKEL-PTALKIVDLSADF 115 (359)
T ss_dssp ECCCTTTHHHHHHTS-CTTCEEEECSSTT
T ss_pred EcCCchhHHHHHHHH-hCCCEEEECCccc
Confidence 888778889999999 9999877655544
No 93
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=98.37 E-value=1.7e-06 Score=79.79 Aligned_cols=98 Identities=16% Similarity=0.097 Sum_probs=69.2
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEe-cCCCCcchhhhhcCCC-------CCCeeee-cCHHHHHhccccCC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID-SHSVGEDIGMVCDMEQ-------PLEIPVM-SDLTMVLGSISQSK 105 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd-~~~~g~d~g~~~g~~~-------~~gv~v~-~dl~~~l~~~~~~~ 105 (257)
|+||+|+||+|++|+.+++.+.++++++|+++.+ +...|+...+..+... ...+.+. .+++++++ .
T Consensus 8 ~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 82 (354)
T 1ys4_A 8 KIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEF-----E 82 (354)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTSGGG-----T
T ss_pred cceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHHHhc-----C
Confidence 4899999999999999999998899999999885 3344555543322100 0011221 24445432 2
Q ss_pred CccEEEEcCChHhHHHHHHHHHHcCCCeEEeC
Q 025154 106 ARAVVIDFTDASTVYDNVKQATAFGMRSVVYV 137 (257)
Q Consensus 106 ~~DVvIDFT~p~~~~~~~~~a~~~Gi~vViGT 137 (257)
++|+|+..+....+.+.+..+++.|+.||.-.
T Consensus 83 ~~DvV~~atp~~~~~~~a~~~~~aG~~VId~s 114 (354)
T 1ys4_A 83 DVDIVFSALPSDLAKKFEPEFAKEGKLIFSNA 114 (354)
T ss_dssp TCCEEEECCCHHHHHHHHHHHHHTTCEEEECC
T ss_pred CCCEEEECCCchHHHHHHHHHHHCCCEEEECC
Confidence 69999988888888999999999999966543
No 94
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=98.36 E-value=1.3e-06 Score=75.77 Aligned_cols=90 Identities=21% Similarity=0.336 Sum_probs=61.3
Q ss_pred CceEEEEcCCChHHHHHHHH-HHhcCCcEEEEEEecC--CCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEE
Q 025154 35 NIKVIINGAVKEIGRAAVIA-VTKARGMEVAGAIDSH--SVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVI 111 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~-i~~~~~~eLvg~vd~~--~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvI 111 (257)
.+||+|+|| |++|+.+++. ....++++++|++|.+ ..|+.+. ..++..++++++++++ . |++|
T Consensus 85 ~~rV~IIGA-G~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i~-------gv~V~~~~dl~eli~~-----~-D~Vi 150 (215)
T 2vt3_A 85 MTDVILIGV-GNLGTAFLHYNFTKNNNTKISMAFDINESKIGTEVG-------GVPVYNLDDLEQHVKD-----E-SVAI 150 (215)
T ss_dssp --CEEEECC-SHHHHHHHHCC------CCEEEEEESCTTTTTCEET-------TEEEEEGGGHHHHCSS-----C-CEEE
T ss_pred CCEEEEEcc-CHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHhc-------CCeeechhhHHHHHHh-----C-CEEE
Confidence 468999996 9999999994 3456789999999953 3333221 1223336788888863 4 9988
Q ss_pred EcCChHhHHHHHHHHHHcCCC-eEEeCC
Q 025154 112 DFTDASTVYDNVKQATAFGMR-SVVYVP 138 (257)
Q Consensus 112 DFT~p~~~~~~~~~a~~~Gi~-vViGTT 138 (257)
..++...+.+.+..|.+.|++ ++.-++
T Consensus 151 IAvPs~~~~ei~~~l~~aGi~~Ilnf~P 178 (215)
T 2vt3_A 151 LTVPAVAAQSITDRLVALGIKGILNFTP 178 (215)
T ss_dssp ECSCHHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EecCchhHHHHHHHHHHcCCCEEEEcCc
Confidence 777777778999999999999 445454
No 95
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=98.34 E-value=7e-07 Score=82.36 Aligned_cols=99 Identities=17% Similarity=0.231 Sum_probs=67.9
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEec-CCCCcchhhhh------cC----------CCC-----CCeeeec
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS-HSVGEDIGMVC------DM----------EQP-----LEIPVMS 92 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~-~~~g~d~g~~~------g~----------~~~-----~gv~v~~ 92 (257)
|+||||+|+ |++|+.+++++.++|+++|+++.|+ ... ..++.++ |. +.. ..+.++.
T Consensus 3 ~ikVgI~G~-GrIGr~l~R~l~~~p~vevvaI~d~~~~~-~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v~~ 80 (337)
T 3e5r_O 3 KIKIGINGF-GRIGRLVARVALQSEDVELVAVNDPFITT-DYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFG 80 (337)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHTCSSEEEEEEECSSSCH-HHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEEEC
T ss_pred ceEEEEECc-CHHHHHHHHHHhCCCCeEEEEEECCCCCH-HHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEEEe
Confidence 379999997 9999999999999999999999884 110 0001111 10 000 0123343
Q ss_pred --CHHHH-HhccccCCCccEEEEcCChHhHHHHHHHHHHcCCC-eEEeCCC
Q 025154 93 --DLTMV-LGSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVVYVPH 139 (257)
Q Consensus 93 --dl~~~-l~~~~~~~~~DVvIDFT~p~~~~~~~~~a~~~Gi~-vViGTTG 139 (257)
|++++ ..+ .++|+|+++|....+.+.+..+++.|+. +||-.++
T Consensus 81 ~~dp~~l~w~~----~~vDvV~eaTg~~~~~e~a~~~l~aGak~VVIs~pa 127 (337)
T 3e5r_O 81 IRNPDEIPWAE----AGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPS 127 (337)
T ss_dssp CSCGGGCCHHH----HTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred cCChHHccccc----cCCCEEEECCCchhhHHHHHHHHHcCCCEEEEecCC
Confidence 66665 111 2799999999999999999999999985 6666553
No 96
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=98.31 E-value=3.4e-06 Score=75.52 Aligned_cols=137 Identities=17% Similarity=0.096 Sum_probs=74.6
Q ss_pred cccccccccCcccccc--CCCCC-CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCee
Q 025154 13 HHISQNVKAKRFISCS--TNPPQ-SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIP 89 (257)
Q Consensus 13 ~~~~~~~~~~~~~~~~--~~~~~-~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~ 89 (257)
||-|+.+.-+-..-+- +.|.. .++||+|+|+ |.||+.+++.+.. .++++ .++|+.. .....+. ..|+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~iIG~-G~mG~~~a~~l~~-~g~~V-~~~~~~~--~~~~~~~----~~g~~ 75 (316)
T 2uyy_A 5 HHHSSGVDLGTENLYFQSMGSITPTDKKIGFLGL-GLMGSGIVSNLLK-MGHTV-TVWNRTA--EKCDLFI----QEGAR 75 (316)
T ss_dssp --------------------CCCCCSSCEEEECC-SHHHHHHHHHHHH-TTCCE-EEECSSG--GGGHHHH----HTTCE
T ss_pred cccccccCccccceeecCCCCCCCCCCeEEEEcc-cHHHHHHHHHHHh-CCCEE-EEEeCCH--HHHHHHH----HcCCE
Confidence 5556665554443333 33332 2489999995 9999999998875 46775 4566531 1222222 23566
Q ss_pred eecCHHHHHhccccCCCccEEEEcCC-hHhHHHHHHH------HHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEc
Q 025154 90 VMSDLTMVLGSISQSKARAVVIDFTD-ASTVYDNVKQ------ATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIA 162 (257)
Q Consensus 90 v~~dl~~~l~~~~~~~~~DVvIDFT~-p~~~~~~~~~------a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~s 162 (257)
+++++++++. ++|+||..+. |....+.+.. .+..|..+|..++ .+.+..+.|.+...+.++.++-+
T Consensus 76 ~~~~~~~~~~------~~DvVi~av~~~~~~~~v~~~~~~~~~~l~~~~~vv~~s~-~~~~~~~~l~~~~~~~~~~~v~~ 148 (316)
T 2uyy_A 76 LGRTPAEVVS------TCDITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMST-VDADTVTELAQVIVSRGGRFLEA 148 (316)
T ss_dssp ECSCHHHHHH------HCSEEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSC-CCHHHHHHHHHHHHHTTCEEEEC
T ss_pred EcCCHHHHHh------cCCEEEEeCCCHHHHHHHHcCchhHhhcCCCCCEEEECCC-CCHHHHHHHHHHHHHcCCEEEEc
Confidence 7788888875 6899997776 5655555442 2334555554444 45555666776665556666655
Q ss_pred cCc
Q 025154 163 PTL 165 (257)
Q Consensus 163 pNf 165 (257)
|.+
T Consensus 149 p~~ 151 (316)
T 2uyy_A 149 PVS 151 (316)
T ss_dssp CEE
T ss_pred Ccc
Confidence 544
No 97
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=98.30 E-value=1.2e-06 Score=76.56 Aligned_cols=97 Identities=14% Similarity=0.133 Sum_probs=69.5
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
+|||+|+|+ |+||+.+++.+... +++++.++|+.. ..+..+. ...++.++++++++++ ++|+||.++
T Consensus 10 ~m~i~iiG~-G~mG~~~a~~l~~~-g~~~v~~~~~~~--~~~~~~~---~~~g~~~~~~~~~~~~------~~Dvvi~av 76 (266)
T 3d1l_A 10 DTPIVLIGA-GNLATNLAKALYRK-GFRIVQVYSRTE--ESARELA---QKVEAEYTTDLAEVNP------YAKLYIVSL 76 (266)
T ss_dssp GCCEEEECC-SHHHHHHHHHHHHH-TCCEEEEECSSH--HHHHHHH---HHTTCEEESCGGGSCS------CCSEEEECC
T ss_pred CCeEEEEcC-CHHHHHHHHHHHHC-CCeEEEEEeCCH--HHHHHHH---HHcCCceeCCHHHHhc------CCCEEEEec
Confidence 479999995 99999999988754 678788888531 1122222 1246777888888774 799999999
Q ss_pred ChHhHHHHHHHHHH---cCCCeEEeCCCCCHHH
Q 025154 115 DASTVYDNVKQATA---FGMRSVVYVPHIQLET 144 (257)
Q Consensus 115 ~p~~~~~~~~~a~~---~Gi~vViGTTG~s~e~ 144 (257)
.+..+.+.+....+ .+..+|..++|++.+.
T Consensus 77 ~~~~~~~v~~~l~~~~~~~~ivv~~s~~~~~~~ 109 (266)
T 3d1l_A 77 KDSAFAELLQGIVEGKREEALMVHTAGSIPMNV 109 (266)
T ss_dssp CHHHHHHHHHHHHTTCCTTCEEEECCTTSCGGG
T ss_pred CHHHHHHHHHHHHhhcCCCcEEEECCCCCchHH
Confidence 88877666665544 4666777777887544
No 98
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.28 E-value=1.1e-05 Score=60.71 Aligned_cols=105 Identities=15% Similarity=0.171 Sum_probs=69.0
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeee----e---cCHHHHHhccccCCC
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV----M---SDLTMVLGSISQSKA 106 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v----~---~dl~~~l~~~~~~~~ 106 (257)
.++||+|+|+ |.||+.+++.+......+++ ++++.. .....+. ..++.. . +++++++ .+
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~-~~~r~~--~~~~~~~----~~~~~~~~~d~~~~~~~~~~~------~~ 69 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVT-VADHDL--AALAVLN----RMGVATKQVDAKDEAGLAKAL------GG 69 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCSSEEEE-EEESCH--HHHHHHH----TTTCEEEECCTTCHHHHHHHT------TT
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCCCceEE-EEeCCH--HHHHHHH----hCCCcEEEecCCCHHHHHHHH------cC
Confidence 3579999998 99999999988865437765 455431 1112221 112211 1 2334444 37
Q ss_pred ccEEEEcCChHhHHHHHHHHHHcCCCeEEeCCCCCHHHHHHHHHHhhh
Q 025154 107 RAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDK 154 (257)
Q Consensus 107 ~DVvIDFT~p~~~~~~~~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~ 154 (257)
+|+||+++.+......+..|.+.|++.+.-++ +.+..+.+.+++++
T Consensus 70 ~d~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~ 115 (118)
T 3ic5_A 70 FDAVISAAPFFLTPIIAKAAKAAGAHYFDLTE--DVAATNAVRALVED 115 (118)
T ss_dssp CSEEEECSCGGGHHHHHHHHHHTTCEEECCCS--CHHHHHHHHHHHHC
T ss_pred CCEEEECCCchhhHHHHHHHHHhCCCEEEecC--cHHHHHHHHHHHHh
Confidence 99999999888889999999999999886333 23445666666655
No 99
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=98.26 E-value=2.4e-06 Score=82.18 Aligned_cols=140 Identities=11% Similarity=0.133 Sum_probs=90.4
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEE--EEecCCCCcchhhhhcCCCCCCeeee-cCHHHHHhccccCCCccEEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAG--AIDSHSVGEDIGMVCDMEQPLEIPVM-SDLTMVLGSISQSKARAVVI 111 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg--~vd~~~~g~d~g~~~g~~~~~gv~v~-~dl~~~l~~~~~~~~~DVvI 111 (257)
++||.|+|+ |.||+.+++.+.+++++.++. ++|+...+.++.+..|.. ...+.+. +|.+++++.+.+ +.|+||
T Consensus 13 ~~rVlIIGa-GgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~-~~~~~Vdadnv~~~l~aLl~--~~DvVI 88 (480)
T 2ph5_A 13 KNRFVILGF-GCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVS-FKLQQITPQNYLEVIGSTLE--ENDFLI 88 (480)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCE-EEECCCCTTTHHHHTGGGCC--TTCEEE
T ss_pred CCCEEEECc-CHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCc-eeEEeccchhHHHHHHHHhc--CCCEEE
Confidence 468999995 999999999999988874222 346554456655544431 1223333 344444433222 249999
Q ss_pred EcCChHhHHHHHHHHHHcCCCeEEeCCC--CC---H------------HHHHHHHHHh-hhcCceEEEccCchHHHH--H
Q 025154 112 DFTDASTVYDNVKQATAFGMRSVVYVPH--IQ---L------------ETVSALSAFC-DKASMGCLIAPTLSIGSI--L 171 (257)
Q Consensus 112 DFT~p~~~~~~~~~a~~~Gi~vViGTTG--~s---~------------e~~~~L~~~a-~~~gipvl~spNfSlGvn--l 171 (257)
+.+.|....+.+++|++.|++.+- |+. |+ . +..+.+++.+ +++| ..+...-|.-|+. +
T Consensus 89 N~s~~~~~l~Im~acleaGv~YlD-Ta~E~~~p~~~~~~~~p~~~~~Y~~~~~~~~~~~~~~G-tAilg~G~nPGvvsvf 166 (480)
T 2ph5_A 89 DVSIGISSLALIILCNQKGALYIN-AATEPWKEEFVMEKMALNRRTNYSLREEVLRLKDKTQK-TALITHGANPGLVSHF 166 (480)
T ss_dssp ECCSSSCHHHHHHHHHHHTCEEEE-SSCCCCCC----------CCCHHHHHHHHHTTTTTCCS-CEECSCBTTTBHHHHH
T ss_pred ECCccccCHHHHHHHHHcCCCEEE-CCCCcccccccccccCcchhhhHHHHHHHHHHHHhcCC-cEEecCCCCccHHHHH
Confidence 999999999999999999999885 432 11 1 2223466665 4467 6777888888885 2
Q ss_pred HHHHHHHhc
Q 025154 172 LQQAAISAS 180 (257)
Q Consensus 172 l~~~a~~l~ 180 (257)
+.++++.++
T Consensus 167 ~~~Al~~la 175 (480)
T 2ph5_A 167 IKEALLNIA 175 (480)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHhHh
Confidence 444444443
No 100
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=98.26 E-value=8.6e-07 Score=81.91 Aligned_cols=96 Identities=21% Similarity=0.221 Sum_probs=65.4
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCC--------------CCcc--hhhhhcCCCCCCeeeecCHHHHH
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS--------------VGED--IGMVCDMEQPLEIPVMSDLTMVL 98 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~--------------~g~d--~g~~~g~~~~~gv~v~~dl~~~l 98 (257)
|+||||+|+ |++|+.+++++.++++++|+++.|... .|+. .+.+... ...++.+..+.++++
T Consensus 2 mikVgI~G~-G~IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~-~~~~l~v~~~~~~~~ 79 (343)
T 2yyy_A 2 PAKVLINGY-GSIGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLF-EDAGIPVEGTILDII 79 (343)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHH-HHTTCCCCCBGGGTG
T ss_pred ceEEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecc-cCCeEEECCchHHhc
Confidence 689999997 999999999998889999999988420 0110 0111000 011333444555555
Q ss_pred hccccCCCccEEEEcCChHhHHHHHH-HHHHcCCCeEEeCC
Q 025154 99 GSISQSKARAVVIDFTDASTVYDNVK-QATAFGMRSVVYVP 138 (257)
Q Consensus 99 ~~~~~~~~~DVvIDFT~p~~~~~~~~-~a~~~Gi~vViGTT 138 (257)
. ++|+|++.|....+.+.+. .+++.|++||+..+
T Consensus 80 ~------~vDiV~eatg~~~s~~~a~~~~l~aG~~VI~sap 114 (343)
T 2yyy_A 80 E------DADIVVDGAPKKIGKQNLENIYKPHKVKAILQGG 114 (343)
T ss_dssp G------GCSEEEECCCTTHHHHHHHHTTTTTTCEEEECTT
T ss_pred c------CCCEEEECCCccccHHHHHHHHHHCCCEEEECCC
Confidence 3 6999998877677788885 89999998776443
No 101
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=98.23 E-value=2.3e-06 Score=74.44 Aligned_cols=98 Identities=16% Similarity=0.177 Sum_probs=66.0
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEc
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDF 113 (257)
+||||+|+| +|.||+.+++.+... +.+ |.++|+.. .....+. ...|+.++++++++++ ++|+||..
T Consensus 2 ~~m~i~iiG-~G~mG~~~a~~l~~~-g~~-v~~~~~~~--~~~~~~~---~~~g~~~~~~~~~~~~------~~D~Vi~~ 67 (259)
T 2ahr_A 2 NAMKIGIIG-VGKMASAIIKGLKQT-PHE-LIISGSSL--ERSKEIA---EQLALPYAMSHQDLID------QVDLVILG 67 (259)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHTTS-SCE-EEEECSSH--HHHHHHH---HHHTCCBCSSHHHHHH------TCSEEEEC
T ss_pred CccEEEEEC-CCHHHHHHHHHHHhC-CCe-EEEECCCH--HHHHHHH---HHcCCEeeCCHHHHHh------cCCEEEEE
Confidence 368999999 599999999988754 444 56777531 1122222 1235667889999885 79999999
Q ss_pred CChHhHHHHHHHHHHcCCCeEEeC-CCCCHHHHHH
Q 025154 114 TDASTVYDNVKQATAFGMRSVVYV-PHIQLETVSA 147 (257)
Q Consensus 114 T~p~~~~~~~~~a~~~Gi~vViGT-TG~s~e~~~~ 147 (257)
+.|..+.+.+... +.|. +|+-+ .|.+.+++++
T Consensus 68 v~~~~~~~v~~~l-~~~~-~vv~~~~~~~~~~l~~ 100 (259)
T 2ahr_A 68 IKPQLFETVLKPL-HFKQ-PIISMAAGISLQRLAT 100 (259)
T ss_dssp SCGGGHHHHHTTS-CCCS-CEEECCTTCCHHHHHH
T ss_pred eCcHhHHHHHHHh-ccCC-EEEEeCCCCCHHHHHH
Confidence 8888777766543 4666 45555 5888765443
No 102
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=98.22 E-value=3.4e-06 Score=80.55 Aligned_cols=111 Identities=14% Similarity=0.151 Sum_probs=84.7
Q ss_pred CceEEEEcCCC---hHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEE
Q 025154 35 NIKVIINGAVK---EIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVI 111 (257)
Q Consensus 35 ~ikV~V~Ga~G---rMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvI 111 (257)
+-+|+|+|+++ ++|..+.+.+.+.. -..+..+++. +. + -.|+++|.+++++.+ .+|++|
T Consensus 8 p~siAVvGas~~~~~~g~~v~~~l~~~g-~~~v~pVnP~--~~---~------i~G~~~y~sl~~lp~------~~Dlav 69 (457)
T 2csu_A 8 PKGIAVIGASNDPKKLGYEVFKNLKEYK-KGKVYPVNIK--EE---E------VQGVKAYKSVKDIPD------EIDLAI 69 (457)
T ss_dssp CSEEEEETCCSCTTSHHHHHHHHHTTCC-SSEEEEECSS--CS---E------ETTEECBSSTTSCSS------CCSEEE
T ss_pred CCeEEEECcCCCCCchHHHHHHHHHHcC-CCEEEEECCC--CC---e------ECCEeccCCHHHcCC------CCCEEE
Confidence 45799999974 78999999887654 3445556653 21 1 247899999998864 799999
Q ss_pred EcCChHhHHHHHHHHHHcCCCeEE-eCCCCCH--H----HHHHHHHHhhhcCceEEEccC
Q 025154 112 DFTDASTVYDNVKQATAFGMRSVV-YVPHIQL--E----TVSALSAFCDKASMGCLIAPT 164 (257)
Q Consensus 112 DFT~p~~~~~~~~~a~~~Gi~vVi-GTTG~s~--e----~~~~L~~~a~~~gipvl~spN 164 (257)
-|+.|+.+.+.++.|.+.|++.|+ =|.||.+ + ..+++.++|+++|+.++ .||
T Consensus 70 i~vp~~~~~~~v~e~~~~Gi~~vv~~s~G~~e~g~~g~~~~~~l~~~a~~~g~~vi-GPn 128 (457)
T 2csu_A 70 IVVPKRFVKDTLIQCGEKGVKGVVIITAGFGETGEEGKREEKELVEIAHKYGMRII-GPN 128 (457)
T ss_dssp ECSCHHHHHHHHHHHHHHTCCEEEECCCSSTTSCHHHHHHHHHHHHHHHHHTCEEE-CSS
T ss_pred EecCHHHHHHHHHHHHHcCCCEEEEecCCCCccccccHHHHHHHHHHHHHcCCEEE-cCC
Confidence 999999999999999999999654 4558853 1 25678899999898765 455
No 103
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=98.21 E-value=3.6e-06 Score=77.36 Aligned_cols=92 Identities=12% Similarity=0.053 Sum_probs=66.7
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhc--CCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHH-HHhccccCCCccEE
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKA--RGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTM-VLGSISQSKARAVV 110 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~--~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~-~l~~~~~~~~~DVv 110 (257)
.|+||+|+||+|+.|+.+++.+.++ |+++|+++.++...|+... +.+ ..+.+. +++. .+ .++|+|
T Consensus 2 ~~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~-~~~----~~i~~~-~~~~~~~------~~vDvV 69 (336)
T 2r00_A 2 QQFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYR-FNG----KTVRVQ-NVEEFDW------SQVHIA 69 (336)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEE-ETT----EEEEEE-EGGGCCG------GGCSEE
T ss_pred CccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCcee-ecC----ceeEEe-cCChHHh------cCCCEE
Confidence 3799999999999999999999888 8999999887544454332 111 123332 2221 22 268999
Q ss_pred EEcCChHhHHHHHHHHHHcCCCeEEeC
Q 025154 111 IDFTDASTVYDNVKQATAFGMRSVVYV 137 (257)
Q Consensus 111 IDFT~p~~~~~~~~~a~~~Gi~vViGT 137 (257)
++.+....+.+.+..+++.|+.+|.-+
T Consensus 70 f~a~g~~~s~~~a~~~~~~G~~vId~s 96 (336)
T 2r00_A 70 LFSAGGELSAKWAPIAAEAGVVVIDNT 96 (336)
T ss_dssp EECSCHHHHHHHHHHHHHTTCEEEECS
T ss_pred EECCCchHHHHHHHHHHHcCCEEEEcC
Confidence 988888888999999999999766544
No 104
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=98.17 E-value=1.2e-05 Score=71.45 Aligned_cols=117 Identities=15% Similarity=0.119 Sum_probs=77.5
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEc
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDF 113 (257)
.|+||+|+|+ |.||+.+++.+.+ .++++. ++|+.. ..+..+. ..|+..++++++++. ++|+||-.
T Consensus 2 ~m~~I~iiG~-G~mG~~~a~~l~~-~G~~V~-~~d~~~--~~~~~~~----~~g~~~~~~~~~~~~------~aDvvi~~ 66 (302)
T 2h78_A 2 HMKQIAFIGL-GHMGAPMATNLLK-AGYLLN-VFDLVQ--SAVDGLV----AAGASAARSARDAVQ------GADVVISM 66 (302)
T ss_dssp -CCEEEEECC-STTHHHHHHHHHH-TTCEEE-EECSSH--HHHHHHH----HTTCEECSSHHHHHT------TCSEEEEC
T ss_pred CCCEEEEEee-cHHHHHHHHHHHh-CCCeEE-EEcCCH--HHHHHHH----HCCCeEcCCHHHHHh------CCCeEEEE
Confidence 3789999995 9999999998875 477765 456531 1122222 236778889999885 79999977
Q ss_pred CC-hHhHHHHHH---H---HHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCch
Q 025154 114 TD-ASTVYDNVK---Q---ATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLS 166 (257)
Q Consensus 114 T~-p~~~~~~~~---~---a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfS 166 (257)
.. +..+.+.+. . .+..+. +|+-++.......+++.+..++.|+.++-+|++.
T Consensus 67 vp~~~~~~~v~~~~~~~~~~l~~~~-~vi~~st~~~~~~~~l~~~~~~~g~~~~~~pv~~ 125 (302)
T 2h78_A 67 LPASQHVEGLYLDDDGLLAHIAPGT-LVLECSTIAPTSARKIHAAARERGLAMLDAPVSG 125 (302)
T ss_dssp CSCHHHHHHHHHSSSCGGGSSCSSC-EEEECSCCCHHHHHHHHHHHHHTTCCEEECCEES
T ss_pred CCCHHHHHHHHcCchhHHhcCCCCc-EEEECCCCCHHHHHHHHHHHHHcCCEEEEEEccC
Confidence 64 444444443 1 223344 4555555556666677777777778888888776
No 105
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=98.17 E-value=8.2e-06 Score=71.92 Aligned_cols=112 Identities=13% Similarity=0.091 Sum_probs=70.6
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
||||+|+|+ |.||+.+++.+.. .++++. ++| .. ..+..+. ..|+.+++++++++. ++|+||-.+
T Consensus 3 ~m~i~iiG~-G~~G~~~a~~l~~-~g~~V~-~~~-~~--~~~~~~~----~~g~~~~~~~~~~~~------~~D~vi~~v 66 (295)
T 1yb4_A 3 AMKLGFIGL-GIMGSPMAINLAR-AGHQLH-VTT-IG--PVADELL----SLGAVNVETARQVTE------FADIIFIMV 66 (295)
T ss_dssp -CEEEECCC-STTHHHHHHHHHH-TTCEEE-ECC-SS--CCCHHHH----TTTCBCCSSHHHHHH------TCSEEEECC
T ss_pred CCEEEEEcc-CHHHHHHHHHHHh-CCCEEE-EEc-CH--HHHHHHH----HcCCcccCCHHHHHh------cCCEEEEEC
Confidence 579999995 9999999998875 477875 455 31 2222332 236677889998885 799999777
Q ss_pred ChHh-HHHHHH------HHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEcc
Q 025154 115 DAST-VYDNVK------QATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAP 163 (257)
Q Consensus 115 ~p~~-~~~~~~------~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~sp 163 (257)
.... ....+. ..+..|..+|.-+++ +....++|.+..++.++.++-+|
T Consensus 67 p~~~~~~~v~~~~~~l~~~l~~~~~vv~~s~~-~~~~~~~l~~~~~~~g~~~~~~p 121 (295)
T 1yb4_A 67 PDTPQVEDVLFGEHGCAKTSLQGKTIVDMSSI-SPIETKRFAQRVNEMGADYLDAP 121 (295)
T ss_dssp SSHHHHHHHHHSTTSSTTSCCTTEEEEECSCC-CHHHHHHHHHHHHTTTEEEEECC
T ss_pred CCHHHHHHHHhCchhHhhcCCCCCEEEECCCC-CHHHHHHHHHHHHHcCCeEEEcc
Confidence 4444 333333 123445656655555 44455667776666566655444
No 106
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=98.16 E-value=2.4e-06 Score=73.17 Aligned_cols=127 Identities=19% Similarity=0.038 Sum_probs=74.2
Q ss_pred cccCCCCCCCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCC
Q 025154 26 SCSTNPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSK 105 (257)
Q Consensus 26 ~~~~~~~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~ 105 (257)
+|.+....+||||+|+| +|.||+.+++.+.+ .+++++.++++.. ..+..+. ...++..+.+..+.++
T Consensus 14 ~~~~~~~m~mmkI~IIG-~G~mG~~la~~l~~-~g~~V~~v~~r~~--~~~~~l~---~~~g~~~~~~~~~~~~------ 80 (220)
T 4huj_A 14 GTENLYFQSMTTYAIIG-AGAIGSALAERFTA-AQIPAIIANSRGP--ASLSSVT---DRFGASVKAVELKDAL------ 80 (220)
T ss_dssp ---CTTGGGSCCEEEEE-CHHHHHHHHHHHHH-TTCCEEEECTTCG--GGGHHHH---HHHTTTEEECCHHHHT------
T ss_pred cccchhhhcCCEEEEEC-CCHHHHHHHHHHHh-CCCEEEEEECCCH--HHHHHHH---HHhCCCcccChHHHHh------
Confidence 34444445578999999 59999999998875 4788877677531 1122222 1224444444444553
Q ss_pred CccEEEEcCChHhHHHHHHHHHH-cCCCeEEeCCCCC-----HH------HHHHHHHHhhhcCceEEEc-cCchH
Q 025154 106 ARAVVIDFTDASTVYDNVKQATA-FGMRSVVYVPHIQ-----LE------TVSALSAFCDKASMGCLIA-PTLSI 167 (257)
Q Consensus 106 ~~DVvIDFT~p~~~~~~~~~a~~-~Gi~vViGTTG~s-----~e------~~~~L~~~a~~~gipvl~s-pNfSl 167 (257)
.+|+||-.+.|..+.+.+..... .+..+|.-+.|+. .+ ..+.|++.... .+++.+ ||+..
T Consensus 81 ~aDvVilavp~~~~~~v~~~l~~~~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~~--~~vv~~~~~~~~ 153 (220)
T 4huj_A 81 QADVVILAVPYDSIADIVTQVSDWGGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVPG--AKVVKAFNTLPA 153 (220)
T ss_dssp TSSEEEEESCGGGHHHHHTTCSCCTTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHSTT--CEEEEESCSSCH
T ss_pred cCCEEEEeCChHHHHHHHHHhhccCCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCCC--CCEEECCCCCCH
Confidence 79999988888877777654321 2444454454662 11 34556666543 566655 44443
No 107
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=98.15 E-value=5.8e-06 Score=71.63 Aligned_cols=91 Identities=21% Similarity=0.234 Sum_probs=68.3
Q ss_pred CCceEEEEcCCChHHHHHHHHH-HhcCCcEEEEEEecC---CCCc-chhhhhcCCCCCCeeee--cCHHHHHhccccCCC
Q 025154 34 SNIKVIINGAVKEIGRAAVIAV-TKARGMEVAGAIDSH---SVGE-DIGMVCDMEQPLEIPVM--SDLTMVLGSISQSKA 106 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i-~~~~~~eLvg~vd~~---~~g~-d~g~~~g~~~~~gv~v~--~dl~~~l~~~~~~~~ 106 (257)
.+.||+|+|| |.+|+++++.+ ....+++++|++|.+ ..|+ .+ .|++|+ +++++++++ .+
T Consensus 83 ~~~~V~IvGa-G~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i---------~GvpV~~~~dL~~~v~~----~~ 148 (212)
T 3keo_A 83 STTNVMLVGC-GNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTE---------DGIPVYGISTINDHLID----SD 148 (212)
T ss_dssp SCEEEEEECC-SHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBCT---------TCCBEEEGGGHHHHC-C----CS
T ss_pred CCCEEEEECc-CHHHHHHHHhhhcccCCeEEEEEEeCCchhccCceeE---------CCeEEeCHHHHHHHHHH----cC
Confidence 4579999997 99999999874 245789999999953 3333 21 256664 577777764 68
Q ss_pred ccEEEEcCChHhHHHHHHHHHHcCCCeEEeCC
Q 025154 107 RAVVIDFTDASTVYDNVKQATAFGMRSVVYVP 138 (257)
Q Consensus 107 ~DVvIDFT~p~~~~~~~~~a~~~Gi~vViGTT 138 (257)
+|++|..++.....+.+..+.+.|++-+.--|
T Consensus 149 Id~vIIAvPs~~aq~v~d~lv~~GIk~I~nFa 180 (212)
T 3keo_A 149 IETAILTVPSTEAQEVADILVKAGIKGILSFS 180 (212)
T ss_dssp CCEEEECSCGGGHHHHHHHHHHHTCCEEEECS
T ss_pred CCEEEEecCchhHHHHHHHHHHcCCCEEEEcC
Confidence 99999777777778899999999999886543
No 108
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=98.14 E-value=1.7e-05 Score=70.10 Aligned_cols=115 Identities=17% Similarity=0.187 Sum_probs=73.5
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEc
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDF 113 (257)
.+|||+|+|+ |.||+.+++.+.. .+++++ ++|+. ......+. ..|+.+++++++++. ++|+||..
T Consensus 3 ~~~~i~iiG~-G~~G~~~a~~l~~-~g~~V~-~~~~~--~~~~~~~~----~~g~~~~~~~~~~~~------~~D~vi~~ 67 (301)
T 3cky_A 3 KSIKIGFIGL-GAMGKPMAINLLK-EGVTVY-AFDLM--EANVAAVV----AQGAQACENNQKVAA------ASDIIFTS 67 (301)
T ss_dssp -CCEEEEECC-CTTHHHHHHHHHH-TTCEEE-EECSS--HHHHHHHH----TTTCEECSSHHHHHH------HCSEEEEC
T ss_pred CCCEEEEECc-cHHHHHHHHHHHH-CCCeEE-EEeCC--HHHHHHHH----HCCCeecCCHHHHHh------CCCEEEEE
Confidence 3589999995 9999999998875 477865 56653 11122222 236777889998885 68999977
Q ss_pred CC-hHhHHHHHH------HHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccC
Q 025154 114 TD-ASTVYDNVK------QATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPT 164 (257)
Q Consensus 114 T~-p~~~~~~~~------~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spN 164 (257)
+. |......+. ..++.|..+|.-++|. .+..+.|.+..++.++.++-+|-
T Consensus 68 vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~-~~~~~~l~~~~~~~g~~~~~~p~ 124 (301)
T 3cky_A 68 LPNAGIVETVMNGPGGVLSACKAGTVIVDMSSVS-PSSTLKMAKVAAEKGIDYVDAPV 124 (301)
T ss_dssp CSSHHHHHHHHHSTTCHHHHSCTTCEEEECCCCC-HHHHHHHHHHHHHTTCEEEECCE
T ss_pred CCCHHHHHHHHcCcchHhhcCCCCCEEEECCCCC-HHHHHHHHHHHHHcCCeEEEccC
Confidence 74 443444332 2345577666666665 33455676666655666665543
No 109
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=98.14 E-value=2.4e-05 Score=70.65 Aligned_cols=118 Identities=12% Similarity=0.115 Sum_probs=76.9
Q ss_pred CCCCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEE
Q 025154 32 PQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVI 111 (257)
Q Consensus 32 ~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvI 111 (257)
...++||+|+|+ |.||+.+++.+.. .++++. ++|+.. ..+..+. ..|+..+++++++++ ++|+||
T Consensus 28 ~~~~~~I~iIG~-G~mG~~~a~~l~~-~G~~V~-~~dr~~--~~~~~l~----~~g~~~~~~~~e~~~------~aDvVi 92 (320)
T 4dll_A 28 DPYARKITFLGT-GSMGLPMARRLCE-AGYALQ-VWNRTP--ARAASLA----ALGATIHEQARAAAR------DADIVV 92 (320)
T ss_dssp -CCCSEEEEECC-TTTHHHHHHHHHH-TTCEEE-EECSCH--HHHHHHH----TTTCEEESSHHHHHT------TCSEEE
T ss_pred ccCCCEEEEECc-cHHHHHHHHHHHh-CCCeEE-EEcCCH--HHHHHHH----HCCCEeeCCHHHHHh------cCCEEE
Confidence 345689999995 9999999998874 578765 466531 1222332 347788899999985 799988
Q ss_pred EcCC-hHhHHHHHH-----HHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCc
Q 025154 112 DFTD-ASTVYDNVK-----QATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTL 165 (257)
Q Consensus 112 DFT~-p~~~~~~~~-----~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNf 165 (257)
-... +..+.+.+. ..+..|.-+| -++..+.+..+++.+..++.|+.++-+|-+
T Consensus 93 ~~vp~~~~~~~v~~~~~~~~~l~~~~~vi-~~st~~~~~~~~~~~~~~~~g~~~~~~pv~ 151 (320)
T 4dll_A 93 SMLENGAVVQDVLFAQGVAAAMKPGSLFL-DMASITPREARDHAARLGALGIAHLDTPVS 151 (320)
T ss_dssp ECCSSHHHHHHHHTTTCHHHHCCTTCEEE-ECSCCCHHHHHHHHHHHHHTTCEEEECCEE
T ss_pred EECCCHHHHHHHHcchhHHhhCCCCCEEE-ecCCCCHHHHHHHHHHHHHcCCEEEeCCCc
Confidence 7765 334444332 1234455444 444455666677777777777777766644
No 110
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=98.13 E-value=3.1e-05 Score=68.52 Aligned_cols=112 Identities=15% Similarity=0.109 Sum_probs=75.1
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcCC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT~ 115 (257)
|||+|+| +|.||+.+++.+.. .+++++ ++|+.. ..+..+. ..++..+++++++++ ++|+||-...
T Consensus 2 ~~i~iIG-~G~mG~~~a~~l~~-~G~~V~-~~dr~~--~~~~~~~----~~g~~~~~~~~~~~~------~aDvvi~~vp 66 (287)
T 3pef_A 2 QKFGFIG-LGIMGSAMAKNLVK-AGCSVT-IWNRSP--EKAEELA----ALGAERAATPCEVVE------SCPVTFAMLA 66 (287)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHH-TTCEEE-EECSSG--GGGHHHH----HTTCEECSSHHHHHH------HCSEEEECCS
T ss_pred CEEEEEe-ecHHHHHHHHHHHH-CCCeEE-EEcCCH--HHHHHHH----HCCCeecCCHHHHHh------cCCEEEEEcC
Confidence 6999999 59999999998875 578876 567531 1222332 346778899999986 6899987765
Q ss_pred -hHhHHHHH------HHHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEcc
Q 025154 116 -ASTVYDNV------KQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAP 163 (257)
Q Consensus 116 -p~~~~~~~------~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~sp 163 (257)
|..+.+.+ ..+++.|.. |+-+++.+.+..+++.+..++.|+..+-+|
T Consensus 67 ~~~~~~~v~~~~~~l~~~l~~~~~-vi~~st~~~~~~~~~~~~~~~~g~~~~~~p 120 (287)
T 3pef_A 67 DPAAAEEVCFGKHGVLEGIGEGRG-YVDMSTVDPATSQRIGVAVVAKGGRFLEAP 120 (287)
T ss_dssp SHHHHHHHHHSTTCHHHHCCTTCE-EEECSCCCHHHHHHHHHHHHHTTCEEEECC
T ss_pred CHHHHHHHHcCcchHhhcCCCCCE-EEeCCCCCHHHHHHHHHHHHHhCCEEEECC
Confidence 44555444 233445554 445566667777777777777677665544
No 111
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=98.12 E-value=3.8e-06 Score=77.28 Aligned_cols=96 Identities=19% Similarity=0.227 Sum_probs=64.6
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEec-CCCCcc---------hhhhhcCC---------CCCCeeee--cC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS-HSVGED---------IGMVCDME---------QPLEIPVM--SD 93 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~-~~~g~d---------~g~~~g~~---------~~~gv~v~--~d 93 (257)
|+||||+|+ |++|+.+++++.++++++|+++.|+ ...+.- -+.+.+.. ....+.++ .|
T Consensus 3 ~ikVgI~G~-G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~~d 81 (335)
T 1u8f_O 3 KVKVGVNGF-GRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERD 81 (335)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSS
T ss_pred ceEEEEEcc-CHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEecCC
Confidence 479999996 9999999999999999999999884 211100 00010000 00012333 36
Q ss_pred HHHH-HhccccCCCccEEEEcCChHhHHHHHHHHHHcCCCeEE
Q 025154 94 LTMV-LGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVV 135 (257)
Q Consensus 94 l~~~-l~~~~~~~~~DVvIDFT~p~~~~~~~~~a~~~Gi~vVi 135 (257)
++++ ..+ .++|+|++.|....+.+.+..+++.|..+|+
T Consensus 82 ~~~l~~~~----~~vDvV~eatg~~~~~e~a~~~l~aGak~V~ 120 (335)
T 1u8f_O 82 PSKIKWGD----AGAEYVVESTGVFTTMEKAGAHLQGGAKRVI 120 (335)
T ss_dssp GGGCCTTT----TTCCEEEECSSSCCSHHHHGGGGGGTCSEEE
T ss_pred HHHCcccc----CCCCEEEECCCchhhHHHHHHHHhCCCeEEE
Confidence 6665 211 3799999999888889999999999955554
No 112
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=98.11 E-value=3e-05 Score=69.70 Aligned_cols=117 Identities=13% Similarity=0.126 Sum_probs=75.8
Q ss_pred CCCCCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEE
Q 025154 31 PPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVV 110 (257)
Q Consensus 31 ~~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVv 110 (257)
+...|+||+|+| +|.||+.+++.+.. .++++. ++|+.. ..+..+. ..|+..+++++++++ .+|+|
T Consensus 17 ~~~~m~~I~iIG-~G~mG~~~A~~l~~-~G~~V~-~~dr~~--~~~~~l~----~~g~~~~~~~~~~~~------~aDvv 81 (310)
T 3doj_A 17 RGSHMMEVGFLG-LGIMGKAMSMNLLK-NGFKVT-VWNRTL--SKCDELV----EHGASVCESPAEVIK------KCKYT 81 (310)
T ss_dssp -CCCSCEEEEEC-CSHHHHHHHHHHHH-TTCEEE-EECSSG--GGGHHHH----HTTCEECSSHHHHHH------HCSEE
T ss_pred ccccCCEEEEEC-ccHHHHHHHHHHHH-CCCeEE-EEeCCH--HHHHHHH----HCCCeEcCCHHHHHH------hCCEE
Confidence 345589999999 59999999998875 577765 467531 1222332 346778889999886 68998
Q ss_pred EEcCC-hHhHHHHH---H---HHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEcc
Q 025154 111 IDFTD-ASTVYDNV---K---QATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAP 163 (257)
Q Consensus 111 IDFT~-p~~~~~~~---~---~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~sp 163 (257)
|-... |..+.+.+ . ..+..|. +|+-+++.+.+..+++.+..++.|+.++-+|
T Consensus 82 i~~vp~~~~~~~v~~~~~~l~~~l~~g~-~vv~~st~~~~~~~~~~~~~~~~g~~~v~~p 140 (310)
T 3doj_A 82 IAMLSDPCAALSVVFDKGGVLEQICEGK-GYIDMSTVDAETSLKINEAITGKGGRFVEGP 140 (310)
T ss_dssp EECCSSHHHHHHHHHSTTCGGGGCCTTC-EEEECSCCCHHHHHHHHHHHHHTTCEEEECC
T ss_pred EEEcCCHHHHHHHHhCchhhhhccCCCC-EEEECCCCCHHHHHHHHHHHHHcCCEEEeCC
Confidence 87663 44444444 2 1233444 4555556667777777777776676655444
No 113
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=98.10 E-value=1.6e-05 Score=73.51 Aligned_cols=125 Identities=13% Similarity=0.156 Sum_probs=76.8
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhh----------cCCCCCCeeeecCHHHHHhcccc
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVC----------DMEQPLEIPVMSDLTMVLGSISQ 103 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~----------g~~~~~gv~v~~dl~~~l~~~~~ 103 (257)
.+|||+|+|+ |.||..++..+.+ .+.++. ++++.. ..+..+. +..-+.++.+++|++++++
T Consensus 28 ~~mkI~VIGa-G~mG~alA~~La~-~G~~V~-l~~r~~--~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~---- 98 (356)
T 3k96_A 28 FKHPIAILGA-GSWGTALALVLAR-KGQKVR-LWSYES--DHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLE---- 98 (356)
T ss_dssp CCSCEEEECC-SHHHHHHHHHHHT-TTCCEE-EECSCH--HHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHT----
T ss_pred cCCeEEEECc-cHHHHHHHHHHHH-CCCeEE-EEeCCH--HHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHh----
Confidence 3689999995 9999999998874 466654 455420 1111111 1100123567889988885
Q ss_pred CCCccEEEEcCChHhHHHHHHHHH---HcCCCeEEeCCCCCHHH---HHHHHHHhhhcCceEEEccCchHHH
Q 025154 104 SKARAVVIDFTDASTVYDNVKQAT---AFGMRSVVYVPHIQLET---VSALSAFCDKASMGCLIAPTLSIGS 169 (257)
Q Consensus 104 ~~~~DVvIDFT~p~~~~~~~~~a~---~~Gi~vViGTTG~s~e~---~~~L~~~a~~~gipvl~spNfSlGv 169 (257)
++|+||-...+....+.+.... ..+..+|.-+.|+..+. .+.+++......+.++..|||.--+
T Consensus 99 --~aDvVilaVp~~~~~~vl~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~~l~~~~~~vlsgP~~a~ev 168 (356)
T 3k96_A 99 --GVTDILIVVPSFAFHEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATELGQVPMAVISGPSLATEV 168 (356)
T ss_dssp --TCCEEEECCCHHHHHHHHHHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHHHHCSCCEEEEESSCCHHHH
T ss_pred --cCCEEEECCCHHHHHHHHHHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHHHcCCCCEEEEECccHHHHH
Confidence 7999996666655555554433 34566777777887642 1234443323346788999998654
No 114
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=98.08 E-value=1.7e-05 Score=69.54 Aligned_cols=113 Identities=13% Similarity=-0.008 Sum_probs=69.1
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
|+||+|+|+ |.||+.+++.+.. ++++. ++|+.. .....+. ..|+.+++ +++++. ++|+||..+
T Consensus 1 M~~i~iiG~-G~~G~~~a~~l~~--g~~V~-~~~~~~--~~~~~~~----~~g~~~~~-~~~~~~------~~D~vi~~v 63 (289)
T 2cvz_A 1 MEKVAFIGL-GAMGYPMAGHLAR--RFPTL-VWNRTF--EKALRHQ----EEFGSEAV-PLERVA------EARVIFTCL 63 (289)
T ss_dssp -CCEEEECC-STTHHHHHHHHHT--TSCEE-EECSST--HHHHHHH----HHHCCEEC-CGGGGG------GCSEEEECC
T ss_pred CCeEEEEcc-cHHHHHHHHHHhC--CCeEE-EEeCCH--HHHHHHH----HCCCcccC-HHHHHh------CCCEEEEeC
Confidence 579999995 9999999998875 78854 566531 1122222 11344444 666664 699999887
Q ss_pred ChHh-HHHHHHHH---HHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCc
Q 025154 115 DAST-VYDNVKQA---TAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTL 165 (257)
Q Consensus 115 ~p~~-~~~~~~~a---~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNf 165 (257)
.+.. ....+... ++.|..+|.-++ ......+.|.+..++.++.++-+|++
T Consensus 64 ~~~~~~~~v~~~l~~~l~~~~~vv~~s~-~~~~~~~~l~~~~~~~g~~~~~~p~~ 117 (289)
T 2cvz_A 64 PTTREVYEVAEALYPYLREGTYWVDATS-GEPEASRRLAERLREKGVTYLDAPVS 117 (289)
T ss_dssp SSHHHHHHHHHHHTTTCCTTEEEEECSC-CCHHHHHHHHHHHHTTTEEEEECCEE
T ss_pred CChHHHHHHHHHHHhhCCCCCEEEECCC-CCHHHHHHHHHHHHHcCCEEEEecCC
Confidence 6454 44444332 234554554333 44455567777777667777777754
No 115
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=98.07 E-value=9.9e-06 Score=75.01 Aligned_cols=98 Identities=14% Similarity=0.085 Sum_probs=67.1
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcC-----CcEEEEEEecCCCCcchhhhhcCCCC-CCeeeec-CHHHHHhccccCCCc
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKAR-----GMEVAGAIDSHSVGEDIGMVCDMEQP-LEIPVMS-DLTMVLGSISQSKAR 107 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~-----~~eLvg~vd~~~~g~d~g~~~g~~~~-~gv~v~~-dl~~~l~~~~~~~~~ 107 (257)
||||+|+||+|++|+.+++.+.+++ .++++.+.++...|+....+.+.-.. ..+.+.+ +.++ +. ++
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~~~~-~~------~~ 81 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTEAAV-LG------GH 81 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECCHHH-HT------TC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccCCHHH-hc------CC
Confidence 6899999999999999999999888 89999987755445544432110000 1222221 3333 42 68
Q ss_pred cEEEEcCChHhHHHHHHHHHHcCCCeEEeCCCC
Q 025154 108 AVVIDFTDASTVYDNVKQATAFGMRSVVYVPHI 140 (257)
Q Consensus 108 DVvIDFT~p~~~~~~~~~a~~~Gi~vViGTTG~ 140 (257)
|+|+..+....+.+.+..+ +.|+.+|.=++-|
T Consensus 82 DvVf~alg~~~s~~~~~~~-~~G~~vIDlSa~~ 113 (352)
T 2nqt_A 82 DAVFLALPHGHSAVLAQQL-SPETLIIDCGADF 113 (352)
T ss_dssp SEEEECCTTSCCHHHHHHS-CTTSEEEECSSTT
T ss_pred CEEEECCCCcchHHHHHHH-hCCCEEEEECCCc
Confidence 9999766666778888888 9998877655544
No 116
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=98.07 E-value=1.9e-05 Score=69.72 Aligned_cols=117 Identities=14% Similarity=0.089 Sum_probs=74.8
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcCC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT~ 115 (257)
|||+|+|+ |.||+.+++.+.. .++++. ++|+.. .....+. ..|+.+++++++++. ++|+||-.+.
T Consensus 1 m~i~iiG~-G~mG~~~a~~l~~-~g~~V~-~~~~~~--~~~~~~~----~~g~~~~~~~~~~~~------~~Dvvi~~vp 65 (296)
T 2gf2_A 1 MPVGFIGL-GNMGNPMAKNLMK-HGYPLI-IYDVFP--DACKEFQ----DAGEQVVSSPADVAE------KADRIITMLP 65 (296)
T ss_dssp CCEEEECC-STTHHHHHHHHHH-TTCCEE-EECSST--HHHHHHH----TTTCEECSSHHHHHH------HCSEEEECCS
T ss_pred CeEEEEec-cHHHHHHHHHHHH-CCCEEE-EEeCCH--HHHHHHH----HcCCeecCCHHHHHh------cCCEEEEeCC
Confidence 58999995 9999999998875 467754 566531 2222332 346777889988885 6899997763
Q ss_pred -hHhHHHHHHH------HHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCchHHH
Q 025154 116 -ASTVYDNVKQ------ATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGS 169 (257)
Q Consensus 116 -p~~~~~~~~~------a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfSlGv 169 (257)
|....+.+.. .++.|.-+| -++|.+.+..+++.+...+.++..+ ...++.|.
T Consensus 66 ~~~~~~~v~~~~~~~~~~l~~~~~vv-~~s~~~~~~~~~~~~~~~~~g~~~~-~~p~~~g~ 124 (296)
T 2gf2_A 66 TSINAIEAYSGANGILKKVKKGSLLI-DSSTIDPAVSKELAKEVEKMGAVFM-DAPVSGGV 124 (296)
T ss_dssp SHHHHHHHHHSTTSGGGTCCTTCEEE-ECSCCCHHHHHHHHHHHHHTTCEEE-ECCEESHH
T ss_pred CHHHHHHHHhCchhHHhcCCCCCEEE-ECCCCCHHHHHHHHHHHHHcCCEEE-EcCCCCCh
Confidence 4444444432 123455444 4889988877777666554454443 33455563
No 117
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=98.06 E-value=9.3e-06 Score=75.39 Aligned_cols=131 Identities=16% Similarity=0.189 Sum_probs=86.1
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCC----C---CCeeeec-CHHHHHhccccCC
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQ----P---LEIPVMS-DLTMVLGSISQSK 105 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~----~---~gv~v~~-dl~~~l~~~~~~~ 105 (257)
.++||+|+||+|-.|+.+++++.++|.++|+.+..+...|+...++..... + .+..+.+ +.++ + .
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~~~-~------~ 78 (359)
T 4dpk_A 6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPTDPKL-M------D 78 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEECCGGG-C------T
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeCCHHH-h------c
Confidence 468999999999999999999999999999998876677877765321000 0 0222321 3222 3 2
Q ss_pred CccEEEEcCChHhHHHHHHHHHHcCCCeEEeCC-------------CCCHHHHHHHHHHhhhcC--ceEEEccC-chHHH
Q 025154 106 ARAVVIDFTDASTVYDNVKQATAFGMRSVVYVP-------------HIQLETVSALSAFCDKAS--MGCLIAPT-LSIGS 169 (257)
Q Consensus 106 ~~DVvIDFT~p~~~~~~~~~a~~~Gi~vViGTT-------------G~s~e~~~~L~~~a~~~g--ipvl~spN-fSlGv 169 (257)
++|+|+..+....+.+.+..+++.|+.+|.=+. +++.++++.++..-++.| ..++=.|| +..++
T Consensus 79 ~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~~~iIanPgC~tt~~ 158 (359)
T 4dpk_A 79 DVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWKGFIVTTPLCTAQGA 158 (359)
T ss_dssp TCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCSSEEEECCCHHHHHH
T ss_pred CCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccCccEEECCCcHHHHH
Confidence 799999777777888999999999998886443 345555444443211111 24676777 44444
Q ss_pred HH
Q 025154 170 IL 171 (257)
Q Consensus 170 nl 171 (257)
.+
T Consensus 159 ~l 160 (359)
T 4dpk_A 159 AI 160 (359)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 118
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=98.06 E-value=9.3e-06 Score=75.39 Aligned_cols=131 Identities=16% Similarity=0.189 Sum_probs=86.0
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCC----C---CCeeeec-CHHHHHhccccCC
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQ----P---LEIPVMS-DLTMVLGSISQSK 105 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~----~---~gv~v~~-dl~~~l~~~~~~~ 105 (257)
.++||+|+||+|-.|+.+++++.++|.++|+.+..+...|+...++..... + .+..+.+ +.++ + .
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~~~-~------~ 78 (359)
T 4dpl_A 6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPTDPKL-M------D 78 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEECCGGG-C------T
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeCCHHH-h------c
Confidence 468999999999999999999999999999998876677877765321000 0 0222321 3222 3 2
Q ss_pred CccEEEEcCChHhHHHHHHHHHHcCCCeEEeCC-------------CCCHHHHHHHHHHhhhcC--ceEEEccC-chHHH
Q 025154 106 ARAVVIDFTDASTVYDNVKQATAFGMRSVVYVP-------------HIQLETVSALSAFCDKAS--MGCLIAPT-LSIGS 169 (257)
Q Consensus 106 ~~DVvIDFT~p~~~~~~~~~a~~~Gi~vViGTT-------------G~s~e~~~~L~~~a~~~g--ipvl~spN-fSlGv 169 (257)
++|+|+..+....+.+.+..+++.|+.+|.=+. +++.++++.++..-++.| ..++=.|| +..++
T Consensus 79 ~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~~~iIanPgC~tt~~ 158 (359)
T 4dpl_A 79 DVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWKGFIVTTPLCTAQGA 158 (359)
T ss_dssp TCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCSSEEEECCCHHHHHH
T ss_pred CCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccCccEEECCCcHHHHH
Confidence 799999777777888999999999998886443 345555444443211111 24676777 34444
Q ss_pred HH
Q 025154 170 IL 171 (257)
Q Consensus 170 nl 171 (257)
.+
T Consensus 159 ~l 160 (359)
T 4dpl_A 159 AI 160 (359)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 119
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=98.05 E-value=1.6e-05 Score=74.43 Aligned_cols=99 Identities=20% Similarity=0.142 Sum_probs=69.1
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEe-cCCCCcchhhhhcCCCC-------CCeeeec-CHHHHHhccccCC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID-SHSVGEDIGMVCDMEQP-------LEIPVMS-DLTMVLGSISQSK 105 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd-~~~~g~d~g~~~g~~~~-------~gv~v~~-dl~~~l~~~~~~~ 105 (257)
|+||+|+||+|-.|+.+++++.++|.++|+.++. +...|+...++...... ....+.+ +.++.++
T Consensus 19 ~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~~~~------ 92 (381)
T 3hsk_A 19 VKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQECKPEGNFL------ 92 (381)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCEESSSCTTGG------
T ss_pred ccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHhcccccccccccccccceEEeCchhhhcc------
Confidence 5899999999999999999999999999998874 44667776543211000 0122211 1111232
Q ss_pred CccEEEEcCChHhHHHHHHHHHHcCCCeEEeCCC
Q 025154 106 ARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPH 139 (257)
Q Consensus 106 ~~DVvIDFT~p~~~~~~~~~a~~~Gi~vViGTTG 139 (257)
++|+|+..+....+.+.+..+++.|+.+|-=+..
T Consensus 93 ~~Dvvf~alp~~~s~~~~~~~~~~G~~VIDlSa~ 126 (381)
T 3hsk_A 93 ECDVVFSGLDADVAGDIEKSFVEAGLAVVSNAKN 126 (381)
T ss_dssp GCSEEEECCCHHHHHHHHHHHHHTTCEEEECCST
T ss_pred cCCEEEECCChhHHHHHHHHHHhCCCEEEEcCCc
Confidence 6899986666677788999999999998865543
No 120
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=98.04 E-value=3.5e-05 Score=69.44 Aligned_cols=115 Identities=16% Similarity=0.099 Sum_probs=71.9
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEc
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDF 113 (257)
.|+||+|+| +|.||+.+++.+.+. +++-|.++|+.........+. ..|+.++++++++++ ++|+||-.
T Consensus 23 ~~~~I~iIG-~G~mG~~~A~~L~~~-G~~~V~~~dr~~~~~~~~~~~----~~g~~~~~~~~e~~~------~aDvVi~~ 90 (312)
T 3qsg_A 23 NAMKLGFIG-FGEAASAIASGLRQA-GAIDMAAYDAASAESWRPRAE----ELGVSCKASVAEVAG------ECDVIFSL 90 (312)
T ss_dssp --CEEEEEC-CSHHHHHHHHHHHHH-SCCEEEEECSSCHHHHHHHHH----HTTCEECSCHHHHHH------HCSEEEEC
T ss_pred CCCEEEEEC-ccHHHHHHHHHHHHC-CCCeEEEEcCCCCHHHHHHHH----HCCCEEeCCHHHHHh------cCCEEEEe
Confidence 368999999 599999999988754 662344667531001111221 346778889999885 68999988
Q ss_pred CChHhHHHHHHHHHHc--CCCeEEeCCCCCHHHHHHHHHHhhhc--CceEE
Q 025154 114 TDASTVYDNVKQATAF--GMRSVVYVPHIQLETVSALSAFCDKA--SMGCL 160 (257)
Q Consensus 114 T~p~~~~~~~~~a~~~--Gi~vViGTTG~s~e~~~~L~~~a~~~--gipvl 160 (257)
..+....+.+....+. .-.+|+-++...+...+++.+..++. |+..+
T Consensus 91 vp~~~~~~~~~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~v 141 (312)
T 3qsg_A 91 VTAQAALEVAQQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYA 141 (312)
T ss_dssp SCTTTHHHHHHHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEEE
T ss_pred cCchhHHHHHHhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEE
Confidence 7777666665544432 22366666666666666666665554 44443
No 121
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=98.03 E-value=7.3e-06 Score=76.09 Aligned_cols=102 Identities=19% Similarity=0.168 Sum_probs=63.7
Q ss_pred CCCCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEec-CCCCc---------chhhhhcC----CCC-----CCeeeec
Q 025154 32 PQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS-HSVGE---------DIGMVCDM----EQP-----LEIPVMS 92 (257)
Q Consensus 32 ~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~-~~~g~---------d~g~~~g~----~~~-----~gv~v~~ 92 (257)
...|+||+|+|+ |++|+.+++++.++|+++|+++-|+ ...+. ..+.+.+. +.. ..+.++.
T Consensus 14 ~~~~ikVgI~G~-G~iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~v~~ 92 (354)
T 3cps_A 14 LYFQGTLGINGF-GRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVKVFQ 92 (354)
T ss_dssp ----CEEEEECC-SHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEEEEC
T ss_pred cCcceEEEEECC-CHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEEEEe
Confidence 344789999998 9999999999999999999999882 21110 00001000 000 0223432
Q ss_pred --CHHHHH-hccccCCCccEEEEcCChHhHHHHHHHHHHcCCC-eEEeCC
Q 025154 93 --DLTMVL-GSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVVYVP 138 (257)
Q Consensus 93 --dl~~~l-~~~~~~~~~DVvIDFT~p~~~~~~~~~a~~~Gi~-vViGTT 138 (257)
|++++. .+ .++|+|++.|......+.+...++.|.. +||-.+
T Consensus 93 ~~dp~~i~w~~----~~vDvV~eatg~~~s~e~a~~~l~~GakkvVId~p 138 (354)
T 3cps_A 93 AKDPAEIPWGA----SGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAP 138 (354)
T ss_dssp CSCGGGCCHHH----HTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSC
T ss_pred cCChHHCCccc----CCCCEEEECCCchhhHHHHHHHHHcCCcEEEEeCC
Confidence 555431 00 2689999988878888899888999974 555443
No 122
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=98.03 E-value=3.1e-05 Score=68.43 Aligned_cols=113 Identities=17% Similarity=0.132 Sum_probs=71.9
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
+|||+|+| .|.||+.+++.+.. .++++ .++|+.. .....+. ..|+.++.+++++++ ++|+||..+
T Consensus 5 ~m~i~iiG-~G~~G~~~a~~l~~-~g~~V-~~~~~~~--~~~~~~~----~~g~~~~~~~~~~~~------~~D~vi~~v 69 (299)
T 1vpd_A 5 TMKVGFIG-LGIMGKPMSKNLLK-AGYSL-VVSDRNP--EAIADVI----AAGAETASTAKAIAE------QCDVIITML 69 (299)
T ss_dssp -CEEEEEC-CSTTHHHHHHHHHH-TTCEE-EEECSCH--HHHHHHH----HTTCEECSSHHHHHH------HCSEEEECC
T ss_pred cceEEEEC-chHHHHHHHHHHHh-CCCEE-EEEeCCH--HHHHHHH----HCCCeecCCHHHHHh------CCCEEEEEC
Confidence 47999999 59999999998875 46775 4666531 1122222 236777889988885 689999877
Q ss_pred C-hHhHHHHH------HHHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEcc
Q 025154 115 D-ASTVYDNV------KQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAP 163 (257)
Q Consensus 115 ~-p~~~~~~~------~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~sp 163 (257)
. |......+ ...++.|..+|.-+++. ....+.|.+...+.|+.++-+|
T Consensus 70 ~~~~~~~~~~~~~~~l~~~l~~~~~vv~~s~~~-~~~~~~l~~~~~~~g~~~~~~p 124 (299)
T 1vpd_A 70 PNSPHVKEVALGENGIIEGAKPGTVLIDMSSIA-PLASREISDALKAKGVEMLDAP 124 (299)
T ss_dssp SSHHHHHHHHHSTTCHHHHCCTTCEEEECSCCC-HHHHHHHHHHHHTTTCEEEECC
T ss_pred CCHHHHHHHHhCcchHhhcCCCCCEEEECCCCC-HHHHHHHHHHHHHcCCeEEEec
Confidence 6 44444333 23345566666555555 4445567776666566655443
No 123
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=98.03 E-value=4.1e-05 Score=71.20 Aligned_cols=93 Identities=12% Similarity=0.037 Sum_probs=62.9
Q ss_pred CceEEEEcCCChHHHHHHH-HHHhc--CCcEEEEEEecCCCCcchhhhhcCCCCCCeeee--cCHHHHHhccccCCCccE
Q 025154 35 NIKVIINGAVKEIGRAAVI-AVTKA--RGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVM--SDLTMVLGSISQSKARAV 109 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~-~i~~~--~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~--~dl~~~l~~~~~~~~~DV 109 (257)
|+||+|+||+|+.|+.+++ ++.++ +..++...... ..|+....+.+ ..+.+. ++.++ +. ++|+
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~-s~G~~v~~~~g----~~i~~~~~~~~~~-~~------~~Dv 68 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTS-QLGQAAPSFGG----TTGTLQDAFDLEA-LK------ALDI 68 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS-STTSBCCGGGT----CCCBCEETTCHHH-HH------TCSE
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeC-CCCCCccccCC----CceEEEecCChHH-hc------CCCE
Confidence 6899999999999999999 55443 23455544333 34654432222 133443 24554 43 7999
Q ss_pred EEEcCChHhHHHHHHHHHHcCCC-eEEeCCC
Q 025154 110 VIDFTDASTVYDNVKQATAFGMR-SVVYVPH 139 (257)
Q Consensus 110 vIDFT~p~~~~~~~~~a~~~Gi~-vViGTTG 139 (257)
|++.+......+++..+++.|++ +||.-++
T Consensus 69 Vf~a~g~~~s~~~a~~~~~~G~k~vVID~ss 99 (367)
T 1t4b_A 69 IVTCQGGDYTNEIYPKLRESGWQGYWIDAAS 99 (367)
T ss_dssp EEECSCHHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred EEECCCchhHHHHHHHHHHCCCCEEEEcCCh
Confidence 99888888899999999999984 6666553
No 124
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=98.01 E-value=1.6e-05 Score=73.78 Aligned_cols=98 Identities=15% Similarity=0.097 Sum_probs=68.5
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeec-CHHHHHhccccCCCccEEEE
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMS-DLTMVLGSISQSKARAVVID 112 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~-dl~~~l~~~~~~~~~DVvID 112 (257)
-|+||+|+||+|..|+.+++++.++|.++|+.+.+....|+...++...- ...+.+.+ +.+++.+ ++|+++-
T Consensus 12 ~~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG~~~~~~~p~~-~~~l~~~~~~~~~~~~------~~Dvvf~ 84 (351)
T 1vkn_A 12 HMIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPST-LENSILSEFDPEKVSK------NCDVLFT 84 (351)
T ss_dssp CCEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGG-CCCCBCBCCCHHHHHH------HCSEEEE
T ss_pred ceeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcccccCChHHhChhh-ccCceEEeCCHHHhhc------CCCEEEE
Confidence 48999999999999999999999999999999777666787776542210 12233322 4555543 6899884
Q ss_pred cCChHhHHHHHHHHHHcCCCeEEeCCCC
Q 025154 113 FTDASTVYDNVKQATAFGMRSVVYVPHI 140 (257)
Q Consensus 113 FT~p~~~~~~~~~a~~~Gi~vViGTTG~ 140 (257)
.+....+.+.+..+ .|+.||--...|
T Consensus 85 alp~~~s~~~~~~~--~g~~VIDlSsdf 110 (351)
T 1vkn_A 85 ALPAGASYDLVREL--KGVKIIDLGADF 110 (351)
T ss_dssp CCSTTHHHHHHTTC--CSCEEEESSSTT
T ss_pred CCCcHHHHHHHHHh--CCCEEEECChhh
Confidence 44445666777666 788877545444
No 125
>1gr0_A Inositol-3-phosphate synthase; isomerase, oxidoreductase, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: NAD; 1.95A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3
Probab=97.97 E-value=9.5e-05 Score=68.65 Aligned_cols=136 Identities=15% Similarity=0.170 Sum_probs=92.4
Q ss_pred CCCceEEEEcCCChHHHHHHHHHHhcC----------------------CcEEEEEEe--cCCCCcchhhhhcCC-----
Q 025154 33 QSNIKVIINGAVKEIGRAAVIAVTKAR----------------------GMEVAGAID--SHSVGEDIGMVCDME----- 83 (257)
Q Consensus 33 ~~~ikV~V~Ga~GrMG~~i~~~i~~~~----------------------~~eLvg~vd--~~~~g~d~g~~~g~~----- 83 (257)
..++||+|+|. |..|+++++-+...+ ++++++++| ..+.|+++.+..-..
T Consensus 13 ~~~~rVaIVGv-GN~GsaLv~Gi~~yk~~~~~~~~~Gl~~~~~g~~~~~Di~iVaafDId~~KVG~~l~~A~~~~~n~~~ 91 (367)
T 1gr0_A 13 STEVRVAIVGV-GNCASSLVQGVEYYYNADDTSTVPGLMHVRFGPYHVRDVKFVAAFDVDAKKVGFDLSDAIFASENNTI 91 (367)
T ss_dssp -CCEEEEEECC-SHHHHHHHHHHHHTTTCCTTSCCTTCSCSEETTEEGGGEEEEEEEECBTTTTTSBHHHHTTSTTCCCC
T ss_pred ccCCCEEEECc-ChHHHHHHHHHHHHhccCcccccCCccccccCCccCCCeEEEEEEcCChHHHHHHhhCCEecCCCchh
Confidence 44799999997 999999999665444 778999999 346676654321000
Q ss_pred -----CCCCee-----------------------eecCHHHHHhccccCCCccEEEEcC---ChHhHHHHHHHHHHcCCC
Q 025154 84 -----QPLEIP-----------------------VMSDLTMVLGSISQSKARAVVIDFT---DASTVYDNVKQATAFGMR 132 (257)
Q Consensus 84 -----~~~gv~-----------------------v~~dl~~~l~~~~~~~~~DVvIDFT---~p~~~~~~~~~a~~~Gi~ 132 (257)
.+.++. ...|+.+.+++ .++||+|.+- +-++..-++.+|++.|++
T Consensus 92 ~~~~v~~~~v~v~~g~~ldgia~~~~~~i~~s~~~~~Di~~~~~~----~~~dVvV~~lp~gs~~aS~~YA~Aal~ag~~ 167 (367)
T 1gr0_A 92 KIADVAPTNVIVQRGPTLDGIGKYYADTIELSDAEPVDVVQALKE----AKVDVLVSYLPVGSEEADKFYAQCAIDAGVA 167 (367)
T ss_dssp CCSCCCCCCCBCEECCCTTSCCHHHHTTSCBCSSCCCCHHHHHHH----TTCSEEEECCCTTCHHHHHHHHHHHHHHTCE
T ss_pred hhhcccccCceEccCCCCCchhhhhhhccccccchhhHHHHHHHH----hCCcEEEEeeeCCCcCHHHHHHHHHHHcCCc
Confidence 000110 12255555654 6899999874 345666788899999999
Q ss_pred eEEeCCCCCHHHHHHHHHHhhhcCceEEEccCch--HHHHHHHHH
Q 025154 133 SVVYVPHIQLETVSALSAFCDKASMGCLIAPTLS--IGSILLQQA 175 (257)
Q Consensus 133 vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfS--lGvnll~~~ 175 (257)
.|-|++-+... ...+.++++++|+|++ .--|= .|-.++...
T Consensus 168 fvN~~P~~~~~-~P~~~el~~~~g~pi~-GdD~Ksq~G~T~~k~~ 210 (367)
T 1gr0_A 168 FVNALPVFIAS-DPVWAKKFTDARVPIV-GDDIKSQVGATITHRV 210 (367)
T ss_dssp EEECSSCCSTT-SHHHHHHHHHHTCEEE-ESSBCCSSCHHHHHHH
T ss_pred eEecCCccccC-CHHHHHHHHHcCCCEe-ccccccccCCChHHHH
Confidence 99999966542 2458888899888855 55566 788765443
No 126
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=97.97 E-value=1.5e-05 Score=73.56 Aligned_cols=94 Identities=17% Similarity=0.155 Sum_probs=62.6
Q ss_pred CceEEEEcCCChHHHHHHHHHHhc--CCcEEEEEEecC-------------CCCcchhhhhcCCC-----CCCeeee--c
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKA--RGMEVAGAIDSH-------------SVGEDIGMVCDMEQ-----PLEIPVM--S 92 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~--~~~eLvg~vd~~-------------~~g~d~g~~~g~~~-----~~gv~v~--~ 92 (257)
|+||||+|+ |++|+.+++++.++ |+++|+++.|.. ..|+..+++.-.+. ...++++ .
T Consensus 2 ~ikVgI~G~-G~IGr~v~r~l~~~~~~~~evvaInd~~~~~~~~~l~~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~ 80 (339)
T 3b1j_A 2 TIRVAINGF-GRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCDR 80 (339)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHCSCCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECCS
T ss_pred ceEEEEECC-CHHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHhccccccCCCCCcEEEcCCeeeecCceEEEEecC
Confidence 489999998 99999999999888 999999987631 11221111100000 0123333 3
Q ss_pred CHHHHHhccccCCCccEEEEcCChHhHHHHHHHHHHcCCC
Q 025154 93 DLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMR 132 (257)
Q Consensus 93 dl~~~l~~~~~~~~~DVvIDFT~p~~~~~~~~~a~~~Gi~ 132 (257)
|++++.- .+.++|+|++.|......+.+...++.|..
T Consensus 81 dp~~l~w---~~~~vDvV~e~tg~~~s~e~a~~~l~~Gak 117 (339)
T 3b1j_A 81 NPLNLPW---KEWDIDLVIESTGVFVTAEGASKHIQAGAK 117 (339)
T ss_dssp CGGGSCT---TTTTCCEEEECSSSCCBHHHHHHHHHTTCS
T ss_pred ChHHCcc---cccCCCEEEECCCccccHHHHHHHHHcCCc
Confidence 5655421 002689999998777788889999999988
No 127
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=97.97 E-value=8.6e-05 Score=68.67 Aligned_cols=117 Identities=12% Similarity=0.037 Sum_probs=72.5
Q ss_pred CCCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEE
Q 025154 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVID 112 (257)
Q Consensus 33 ~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvID 112 (257)
-.+|||+|+| +|.||+.+++.+.+ .+++++ ++|+.. ..+..+. ..|+..+++++++++.. ..+|+||-
T Consensus 20 m~~mkIgiIG-lG~mG~~~A~~L~~-~G~~V~-v~dr~~--~~~~~l~----~~g~~~~~s~~e~~~~a---~~~DvVi~ 87 (358)
T 4e21_A 20 FQSMQIGMIG-LGRMGADMVRRLRK-GGHECV-VYDLNV--NAVQALE----REGIAGARSIEEFCAKL---VKPRVVWL 87 (358)
T ss_dssp --CCEEEEEC-CSHHHHHHHHHHHH-TTCEEE-EECSCH--HHHHHHH----TTTCBCCSSHHHHHHHS---CSSCEEEE
T ss_pred hcCCEEEEEC-chHHHHHHHHHHHh-CCCEEE-EEeCCH--HHHHHHH----HCCCEEeCCHHHHHhcC---CCCCEEEE
Confidence 3458999999 59999999998875 567765 567531 1222332 34677788999988620 23499997
Q ss_pred cCChHhHHHHHHHHH---HcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEc
Q 025154 113 FTDASTVYDNVKQAT---AFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIA 162 (257)
Q Consensus 113 FT~p~~~~~~~~~a~---~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~s 162 (257)
...+..+.+.+.... +.|.-+|..+|.. .....++.+..++.|+..+=+
T Consensus 88 ~vp~~~v~~vl~~l~~~l~~g~iiId~st~~-~~~~~~~~~~l~~~g~~~vda 139 (358)
T 4e21_A 88 MVPAAVVDSMLQRMTPLLAANDIVIDGGNSH-YQDDIRRADQMRAQGITYVDV 139 (358)
T ss_dssp CSCGGGHHHHHHHHGGGCCTTCEEEECSSCC-HHHHHHHHHHHHTTTCEEEEE
T ss_pred eCCHHHHHHHHHHHHhhCCCCCEEEeCCCCC-hHHHHHHHHHHHHCCCEEEeC
Confidence 776665555554443 3455555555544 444555666666667765533
No 128
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=97.96 E-value=1.4e-05 Score=73.76 Aligned_cols=99 Identities=22% Similarity=0.187 Sum_probs=66.5
Q ss_pred CceEEEEcCCChHHHHHHHHHHhc--CCcEEEEEEec-------------CCCCcchhhhh---cC---CCCCCeeee--
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKA--RGMEVAGAIDS-------------HSVGEDIGMVC---DM---EQPLEIPVM-- 91 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~--~~~eLvg~vd~-------------~~~g~d~g~~~---g~---~~~~gv~v~-- 91 (257)
|+||||+|+ |++|+.+++++.++ |+++|+++-|. ...|+..+++. +. .....+.++
T Consensus 1 ~ikVgInG~-G~IGr~llR~l~~~~~p~~eivaInd~~~~~~~a~ll~sds~~G~~~~~v~~~~~~~l~v~g~~i~v~~~ 79 (337)
T 1rm4_O 1 KLKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSD 79 (337)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHTCSSCSEEEEEEECTTCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEECC
T ss_pred CeEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEEEcCCCHHHHHHHhcccccCCCccceeEEecCCeEEECCeEEEEEec
Confidence 689999998 99999999999988 99999998852 11232222211 10 000112333
Q ss_pred cCHHHH-HhccccCCCccEEEEcCChHhHHHHHHHHHHcCCCeEEeCC
Q 025154 92 SDLTMV-LGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVP 138 (257)
Q Consensus 92 ~dl~~~-l~~~~~~~~~DVvIDFT~p~~~~~~~~~a~~~Gi~vViGTT 138 (257)
.|++++ ..+ .++|+|++.|......+.+...++.|..+|+=+.
T Consensus 80 ~dp~~i~w~~----~gvDiV~eatg~~~s~e~a~~~l~~Gak~V~iSa 123 (337)
T 1rm4_O 80 RNPVNLPWGD----MGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITA 123 (337)
T ss_dssp SCGGGSCHHH----HTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESS
T ss_pred CChhhCcccc----cCCCEEEECCCchhhHHHHHHHHHcCCEEEEECC
Confidence 345443 111 2689999988878888999999999998887543
No 129
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=97.96 E-value=2.3e-05 Score=72.96 Aligned_cols=94 Identities=15% Similarity=0.141 Sum_probs=67.9
Q ss_pred CceEEEEcCCChHHHHHHHHHHhc--CCcEEEEEEecCCCCcchhhhhcCCCCCCeeeec-CHHHHHhccccCCCccEEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKA--RGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMS-DLTMVLGSISQSKARAVVI 111 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~--~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~-dl~~~l~~~~~~~~~DVvI 111 (257)
++||+|+||+|..|+.+++.+.++ |..+|+.+..+...|+... +.+ .+..+.+ +.+ .+ .++|+|+
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~-~~~----~~~~~~~~~~~-~~------~~~Dvvf 69 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLK-FKD----QDITIEETTET-AF------EGVDIAL 69 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEE-ETT----EEEEEEECCTT-TT------TTCSEEE
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcce-ecC----CCceEeeCCHH-Hh------cCCCEEE
Confidence 589999999999999999988876 7888888766555565443 111 1222221 222 23 2799999
Q ss_pred EcCChHhHHHHHHHHHHcCCCeEEeCCCC
Q 025154 112 DFTDASTVYDNVKQATAFGMRSVVYVPHI 140 (257)
Q Consensus 112 DFT~p~~~~~~~~~a~~~Gi~vViGTTG~ 140 (257)
..+....+.+.+..+++.|+.+|--+.-|
T Consensus 70 ~a~~~~~s~~~a~~~~~~G~~vIDlSa~~ 98 (366)
T 3pwk_A 70 FSAGSSTSAKYAPYAVKAGVVVVDNTSYF 98 (366)
T ss_dssp ECSCHHHHHHHHHHHHHTTCEEEECSSTT
T ss_pred ECCChHhHHHHHHHHHHCCCEEEEcCCcc
Confidence 88877888999999999999887655543
No 130
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=97.96 E-value=5.5e-05 Score=65.67 Aligned_cols=104 Identities=18% Similarity=0.148 Sum_probs=68.8
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcCC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT~ 115 (257)
|||+|+|+ |.||+.+++.+.+ .++++.. +|+.........+. ..|+. +++++++. ++|+||-...
T Consensus 1 M~I~iIG~-G~mG~~la~~l~~-~g~~V~~-~~~~~~~~~~~~~~----~~g~~--~~~~~~~~------~aDvvi~~v~ 65 (264)
T 1i36_A 1 LRVGFIGF-GEVAQTLASRLRS-RGVEVVT-SLEGRSPSTIERAR----TVGVT--ETSEEDVY------SCPVVISAVT 65 (264)
T ss_dssp CEEEEESC-SHHHHHHHHHHHH-TTCEEEE-CCTTCCHHHHHHHH----HHTCE--ECCHHHHH------TSSEEEECSC
T ss_pred CeEEEEec-hHHHHHHHHHHHH-CCCeEEE-eCCccCHHHHHHHH----HCCCc--CCHHHHHh------cCCEEEEECC
Confidence 58999995 9999999998875 5778766 45421111122222 12444 67777775 7999998887
Q ss_pred hHhHHHHHHHHHHcCCCeEEeCCCCCHHHHHHHHHHhhh
Q 025154 116 ASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDK 154 (257)
Q Consensus 116 p~~~~~~~~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~ 154 (257)
+....+.+....+.-.++|+-+++.+.+..+.|.+...+
T Consensus 66 ~~~~~~~~~~~~~~~~~~vi~~s~~~~~~~~~l~~~~~~ 104 (264)
T 1i36_A 66 PGVALGAARRAGRHVRGIYVDINNISPETVRMASSLIEK 104 (264)
T ss_dssp GGGHHHHHHHHHTTCCSEEEECSCCCHHHHHHHHHHCSS
T ss_pred CHHHHHHHHHHHHhcCcEEEEccCCCHHHHHHHHHHHhh
Confidence 776666665555443337777777777666777777665
No 131
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=97.95 E-value=0.00012 Score=65.22 Aligned_cols=112 Identities=14% Similarity=0.097 Sum_probs=72.6
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
++||+|+| .|.||+.+++.+.+ .++++. ++|+.. ..+..+. ..|+..++++++++ . +|+||-..
T Consensus 15 ~~~I~vIG-~G~mG~~~A~~l~~-~G~~V~-~~dr~~--~~~~~~~----~~g~~~~~~~~~~~------~-aDvvi~~v 78 (296)
T 3qha_A 15 QLKLGYIG-LGNMGAPMATRMTE-WPGGVT-VYDIRI--EAMTPLA----EAGATLADSVADVA------A-ADLIHITV 78 (296)
T ss_dssp CCCEEEEC-CSTTHHHHHHHHTT-STTCEE-EECSST--TTSHHHH----HTTCEECSSHHHHT------T-SSEEEECC
T ss_pred CCeEEEEC-cCHHHHHHHHHHHH-CCCeEE-EEeCCH--HHHHHHH----HCCCEEcCCHHHHH------h-CCEEEEEC
Confidence 46999999 59999999998764 577765 457532 1122232 24677888999987 4 99988766
Q ss_pred C-hHhHHHHHHHHHH---cCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEcc
Q 025154 115 D-ASTVYDNVKQATA---FGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAP 163 (257)
Q Consensus 115 ~-p~~~~~~~~~a~~---~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~sp 163 (257)
. +..+.+.+....+ .|. +|+-++.......+++.+..++.|+.++-+|
T Consensus 79 p~~~~~~~v~~~l~~~l~~g~-ivv~~st~~~~~~~~~~~~~~~~g~~~~~~p 130 (296)
T 3qha_A 79 LDDAQVREVVGELAGHAKPGT-VIAIHSTISDTTAVELARDLKARDIHIVDAP 130 (296)
T ss_dssp SSHHHHHHHHHHHHTTCCTTC-EEEECSCCCHHHHHHHHHHHGGGTCEEEECC
T ss_pred CChHHHHHHHHHHHHhcCCCC-EEEEeCCCCHHHHHHHHHHHHHcCCEEEeCC
Confidence 5 4444545444433 344 4444555556666777777776677666554
No 132
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=97.94 E-value=2.3e-05 Score=72.05 Aligned_cols=91 Identities=16% Similarity=0.155 Sum_probs=64.3
Q ss_pred CceEEEEcCCChHHHHHHHHHH--hcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeec-CHHHHHhccccCCCccEEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVT--KARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMS-DLTMVLGSISQSKARAVVI 111 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~--~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~-dl~~~l~~~~~~~~~DVvI 111 (257)
+|||+|+||+|++|+.+++.+. ..+.++|+++.++...|+... +.+ ..+.+.+ +.++ + .++|+|+
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~-~~g----~~i~~~~~~~~~-~------~~~DvV~ 73 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMG-FAE----SSLRVGDVDSFD-F------SSVGLAF 73 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEE-ETT----EEEECEEGGGCC-G------GGCSEEE
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccc-cCC----cceEEecCCHHH-h------cCCCEEE
Confidence 4799999999999999999988 568999998877543343221 111 1222221 2222 3 2689999
Q ss_pred EcCChHhHHHHHHHHHHcCCCeEEeC
Q 025154 112 DFTDASTVYDNVKQATAFGMRSVVYV 137 (257)
Q Consensus 112 DFT~p~~~~~~~~~a~~~Gi~vViGT 137 (257)
..+......+.+..+++.|+.+|.=+
T Consensus 74 ~a~g~~~s~~~a~~~~~aG~kvId~S 99 (340)
T 2hjs_A 74 FAAAAEVSRAHAERARAAGCSVIDLS 99 (340)
T ss_dssp ECSCHHHHHHHHHHHHHTTCEEEETT
T ss_pred EcCCcHHHHHHHHHHHHCCCEEEEeC
Confidence 87777888899999999999877544
No 133
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=97.94 E-value=7.8e-05 Score=66.27 Aligned_cols=114 Identities=9% Similarity=0.091 Sum_probs=72.5
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCc---EEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGM---EVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVI 111 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~---eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvI 111 (257)
++||+|+|+ |.||+.+++.+... ++ + +.++|+.. .....+. ..+|+.++.|..++++ ++|+||
T Consensus 3 ~~~I~iIG~-G~mG~aia~~l~~~-g~~~~~-V~v~dr~~--~~~~~l~---~~~gi~~~~~~~~~~~------~aDvVi 68 (280)
T 3tri_A 3 TSNITFIGG-GNMARNIVVGLIAN-GYDPNR-ICVTNRSL--DKLDFFK---EKCGVHTTQDNRQGAL------NADVVV 68 (280)
T ss_dssp CSCEEEESC-SHHHHHHHHHHHHT-TCCGGG-EEEECSSS--HHHHHHH---HTTCCEEESCHHHHHS------SCSEEE
T ss_pred CCEEEEEcc-cHHHHHHHHHHHHC-CCCCCe-EEEEeCCH--HHHHHHH---HHcCCEEeCChHHHHh------cCCeEE
Confidence 579999995 99999999988754 34 4 34667531 2223332 2357888889888885 799999
Q ss_pred EcCChHhHHHHHHHHHHc---CCCeEEe-CCCCCHHHHHHHHHHhhhcCceEE-EccCch
Q 025154 112 DFTDASTVYDNVKQATAF---GMRSVVY-VPHIQLETVSALSAFCDKASMGCL-IAPTLS 166 (257)
Q Consensus 112 DFT~p~~~~~~~~~a~~~---Gi~vViG-TTG~s~e~~~~L~~~a~~~gipvl-~spNfS 166 (257)
-...|....+.+...... +..+|+- +.|++.++ |+++... +.+++ .-||..
T Consensus 69 lav~p~~~~~vl~~l~~~~l~~~~iiiS~~agi~~~~---l~~~l~~-~~~vvr~mPn~p 124 (280)
T 3tri_A 69 LAVKPHQIKMVCEELKDILSETKILVISLAVGVTTPL---IEKWLGK-ASRIVRAMPNTP 124 (280)
T ss_dssp ECSCGGGHHHHHHHHHHHHHTTTCEEEECCTTCCHHH---HHHHHTC-CSSEEEEECCGG
T ss_pred EEeCHHHHHHHHHHHHhhccCCCeEEEEecCCCCHHH---HHHHcCC-CCeEEEEecCCh
Confidence 888887777666554432 3335544 55888654 4444332 13444 336654
No 134
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=97.94 E-value=4.2e-05 Score=67.64 Aligned_cols=115 Identities=16% Similarity=0.141 Sum_probs=74.8
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
|+||+|+| +|.||+.+++.+.+. ++++. ++|+.. ..+..+. ..|+.++++++++++ ++|+||-..
T Consensus 1 M~~I~iiG-~G~mG~~~a~~l~~~-G~~V~-~~dr~~--~~~~~~~----~~g~~~~~~~~~~~~------~advvi~~v 65 (287)
T 3pdu_A 1 MTTYGFLG-LGIMGGPMAANLVRA-GFDVT-VWNRNP--AKCAPLV----ALGARQASSPAEVCA------ACDITIAML 65 (287)
T ss_dssp CCCEEEEC-CSTTHHHHHHHHHHH-TCCEE-EECSSG--GGGHHHH----HHTCEECSCHHHHHH------HCSEEEECC
T ss_pred CCeEEEEc-cCHHHHHHHHHHHHC-CCeEE-EEcCCH--HHHHHHH----HCCCeecCCHHHHHH------cCCEEEEEc
Confidence 67999999 599999999988754 67765 466531 1122222 236777889999886 689998776
Q ss_pred ChH-hHHHHH---HH---HHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCc
Q 025154 115 DAS-TVYDNV---KQ---ATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTL 165 (257)
Q Consensus 115 ~p~-~~~~~~---~~---a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNf 165 (257)
.+. .+.+.+ .. .+..|. +|+-++..+.+..+++.+..++.|+.++-+|.+
T Consensus 66 ~~~~~~~~v~~~~~~l~~~l~~g~-~vv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~ 122 (287)
T 3pdu_A 66 ADPAAAREVCFGANGVLEGIGGGR-GYIDMSTVDDETSTAIGAAVTARGGRFLEAPVS 122 (287)
T ss_dssp SSHHHHHHHHHSTTCGGGTCCTTC-EEEECSCCCHHHHHHHHHHHHHTTCEEEECCEE
T ss_pred CCHHHHHHHHcCchhhhhcccCCC-EEEECCCCCHHHHHHHHHHHHHcCCEEEECCcc
Confidence 544 444444 22 223444 445555556666677777777767777666644
No 135
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.93 E-value=6.9e-05 Score=71.75 Aligned_cols=130 Identities=16% Similarity=0.109 Sum_probs=86.4
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeee----e---cCHHHHHhccccCCCc
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV----M---SDLTMVLGSISQSKAR 107 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v----~---~dl~~~l~~~~~~~~~ 107 (257)
+.||+|+|+ |.+|+.+++.+.+.++.++ .++++.. ..+..++. ..++.. . +++.+++. ++
T Consensus 23 ~k~VlIiGA-GgiG~aia~~L~~~~g~~V-~v~~R~~--~ka~~la~---~~~~~~~~~D~~d~~~l~~~l~------~~ 89 (467)
T 2axq_A 23 GKNVLLLGS-GFVAQPVIDTLAANDDINV-TVACRTL--ANAQALAK---PSGSKAISLDVTDDSALDKVLA------DN 89 (467)
T ss_dssp CEEEEEECC-STTHHHHHHHHHTSTTEEE-EEEESSH--HHHHHHHG---GGTCEEEECCTTCHHHHHHHHH------TS
T ss_pred CCEEEEECC-hHHHHHHHHHHHhCCCCeE-EEEECCH--HHHHHHHH---hcCCcEEEEecCCHHHHHHHHc------CC
Confidence 568999997 9999999999987767874 4556431 11222221 112211 1 23445554 79
Q ss_pred cEEEEcCChHhHHHHHHHHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCchHHHH--HHHHHHHHh
Q 025154 108 AVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSI--LLQQAAISA 179 (257)
Q Consensus 108 DVvIDFT~p~~~~~~~~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfSlGvn--ll~~~a~~l 179 (257)
|+||..+.+.........|++.|++++. ++-++++ ...+.+.|+++|+.++-...|.-|+. ++.+++.++
T Consensus 90 DvVIn~tp~~~~~~v~~a~l~~g~~vvd-~~~~~p~-~~~Ll~~Ak~aGv~~i~g~G~~PG~~~~~a~~li~q~ 161 (467)
T 2axq_A 90 DVVISLIPYTFHPNVVKSAIRTKTDVVT-SSYISPA-LRELEPEIVKAGITVMNEIGLDPGIDHLYAVKTIDEV 161 (467)
T ss_dssp SEEEECSCGGGHHHHHHHHHHHTCEEEE-CSCCCHH-HHHHHHHHHHHTCEEECSCBBTTBHHHHHHHHHHHHH
T ss_pred CEEEECCchhhhHHHHHHHHhcCCEEEE-eecCCHH-HHHHHHHHHHcCCEEEecCCcCccchHHHHHHHHHHH
Confidence 9999998777666778899999999875 3434554 46677788888999887777766653 234444444
No 136
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=97.91 E-value=2e-05 Score=73.81 Aligned_cols=93 Identities=16% Similarity=0.182 Sum_probs=62.4
Q ss_pred CceEEEEcCCChHHHHHHHHHHhc--CCcEEEEEEec-------------CCCCcchhhhh--c--C-CCCCCeeee--c
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKA--RGMEVAGAIDS-------------HSVGEDIGMVC--D--M-EQPLEIPVM--S 92 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~--~~~eLvg~vd~-------------~~~g~d~g~~~--g--~-~~~~gv~v~--~ 92 (257)
|+||+|+|+ |++|+.+++++.++ ++++|+++-|. ...|+..+++. + + .....+.++ .
T Consensus 2 ~ikVgInGf-GrIGr~vlR~l~~~~~~~veIVaInd~~d~~~~a~ll~yds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~ 80 (380)
T 2d2i_A 2 TIRVAINGF-GRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCDR 80 (380)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHCSSCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECCS
T ss_pred CcEEEEECc-CHHHHHHHHHHhcCCCCCEEEEEEecCCCHHHHHHhhcccccCCCCCCcEEEeCCeEEECCeEEEEEecC
Confidence 489999997 99999999999887 89999998763 11222211110 0 0 000113332 3
Q ss_pred CHHHHH-hccccCCCccEEEEcCChHhHHHHHHHHHHcCCC
Q 025154 93 DLTMVL-GSISQSKARAVVIDFTDASTVYDNVKQATAFGMR 132 (257)
Q Consensus 93 dl~~~l-~~~~~~~~~DVvIDFT~p~~~~~~~~~a~~~Gi~ 132 (257)
|++++. .+ .++|+|++.|......+.+...++.|..
T Consensus 81 dp~~l~w~~----~gvDvV~e~TG~f~s~e~a~~hl~aGak 117 (380)
T 2d2i_A 81 NPLNLPWKE----WDIDLVIESTGVFVTAEGASKHIQAGAK 117 (380)
T ss_dssp CGGGCCHHH----HTCCEEEECSSSCCBHHHHHHHHHTTCS
T ss_pred ChHHCCccc----CCCCEEEECCCccccHHHHHHHHHcCCc
Confidence 555542 10 2689999998877888899999999988
No 137
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=97.90 E-value=1e-05 Score=71.52 Aligned_cols=111 Identities=15% Similarity=0.123 Sum_probs=69.7
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
||||+|+|++|.||+.+++.+.. .+++++ ++|+.. .....+. ..|+.+. ++.++++ ++|+||.+.
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~-~g~~V~-~~~r~~--~~~~~~~----~~g~~~~-~~~~~~~------~aDvVi~av 75 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHD-SAHHLA-AIEIAP--EGRDRLQ----GMGIPLT-DGDGWID------EADVVVLAL 75 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH-SSSEEE-EECCSH--HHHHHHH----HTTCCCC-CSSGGGG------TCSEEEECS
T ss_pred CCEEEEECCCCHHHHHHHHHHHh-CCCEEE-EEECCH--HHHHHHH----hcCCCcC-CHHHHhc------CCCEEEEcC
Confidence 57999999669999999998875 567876 566531 1122222 1234333 5556664 799999888
Q ss_pred ChHhHHHHHHHHHH---cCCCeEEeCCCCCHHHHHHHHHHhhhcCceEE-EccCc
Q 025154 115 DASTVYDNVKQATA---FGMRSVVYVPHIQLETVSALSAFCDKASMGCL-IAPTL 165 (257)
Q Consensus 115 ~p~~~~~~~~~a~~---~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl-~spNf 165 (257)
.|....+.+..... .+.-+|..++|.+.+ .++++ ..+..++ ..||+
T Consensus 76 ~~~~~~~v~~~l~~~l~~~~ivv~~s~~~~~~---~l~~~--~~~~~~v~~~P~~ 125 (286)
T 3c24_A 76 PDNIIEKVAEDIVPRVRPGTIVLILDAAAPYA---GVMPE--RADITYFIGHPCH 125 (286)
T ss_dssp CHHHHHHHHHHHGGGSCTTCEEEESCSHHHHH---TCSCC--CTTSEEEEEEECC
T ss_pred CchHHHHHHHHHHHhCCCCCEEEECCCCchhH---HHHhh--hCCCeEEecCCCC
Confidence 88877666655433 355555566676432 23332 2346777 77777
No 138
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=97.89 E-value=2.8e-05 Score=71.42 Aligned_cols=101 Identities=25% Similarity=0.218 Sum_probs=66.5
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCc-------c--hhhhhcCC----CCC-----Ceeeec--CH
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGE-------D--IGMVCDME----QPL-----EIPVMS--DL 94 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~-------d--~g~~~g~~----~~~-----gv~v~~--dl 94 (257)
|+||||+|+ |++|+.+++++.++|+++|+++-+....+. | -+.+.+.. ..+ .+.++. |+
T Consensus 1 ~ikVgI~G~-G~iG~~l~R~l~~~~~veiv~i~~~~~~~~~a~l~~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~dp 79 (330)
T 1gad_O 1 TIKVGINGF-GRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDP 79 (330)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred CeEEEEECc-CHHHHHHHHHHHcCCCeEEEEEcCCCChhHHhHhhcccccCCCCCCeEEEcCCEEEECCEEEEEEEcCCh
Confidence 689999995 999999999999999999999987421111 0 01110000 000 122332 45
Q ss_pred HHHH-hccccCCCccEEEEcCChHhHHHHHHHHHHcCCCeEEeCCCC
Q 025154 95 TMVL-GSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHI 140 (257)
Q Consensus 95 ~~~l-~~~~~~~~~DVvIDFT~p~~~~~~~~~a~~~Gi~vViGTTG~ 140 (257)
+++- .. .++|+|++.|......+.+...++.|..+|+=+..+
T Consensus 80 ~~i~w~~----~~vDvVf~atg~~~s~e~a~~~l~~GakvVdlSa~~ 122 (330)
T 1gad_O 80 ANLKWDE----VGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPS 122 (330)
T ss_dssp GGGCHHH----HTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred hhCcccc----ccCCEEEECCCccccHHHHHHHHHCCCEEEEECCCC
Confidence 5431 10 268999998888888899999999999987654433
No 139
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=97.88 E-value=3.1e-05 Score=72.12 Aligned_cols=117 Identities=9% Similarity=0.111 Sum_probs=74.9
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeee-----cC--------------HHH
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVM-----SD--------------LTM 96 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~-----~d--------------l~~ 96 (257)
.||+|.|+||.+|+..++.+.+.+++++++..... +...+.....+++..++ .+ +.+
T Consensus 4 k~i~ILGsTGSIG~~tldVi~~~~~~~vvaL~a~~----n~~~l~~q~~~f~p~~v~v~~~~~~~~~l~~~~~G~~~l~e 79 (376)
T 3a06_A 4 RTLVILGATGSIGTQTLDVLKKVKGIRLIGISFHS----NLELAFKIVKEFNVKNVAITGDVEFEDSSINVWKGSHSIEE 79 (376)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSCSEEEEEEEESS----CHHHHHHHHHHHTCCEEEECSSCCCCCSSSEEEESTTHHHH
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCeEEEEEEccC----CHHHHHHHHHHcCCCEEEEccHHHHHHHHHHHccCHHHHHH
Confidence 68999999999999999999888789999985421 11111100001111111 11 245
Q ss_pred HHhccccCCCccEEEEcCChHhHHHHHHHHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEE
Q 025154 97 VLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCL 160 (257)
Q Consensus 97 ~l~~~~~~~~~DVvIDFT~p~~~~~~~~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl 160 (257)
++.. .++|+|+-.+.-...+.....|+++|++|.+.-=.-.-..-+.+.++++++|+.++
T Consensus 80 l~~~----~~~D~Vv~AivG~aGL~ptlaAi~aGK~vaLANKEsLV~aG~li~~~a~~~g~~ll 139 (376)
T 3a06_A 80 MLEA----LKPDITMVAVSGFSGLRAVLASLEHSKRVCLANKESLVCGGFLVKKKLKEKGTELI 139 (376)
T ss_dssp HHHH----HCCSEEEECCCSTTHHHHHHHHHHHCSEEEECCSHHHHHHHHHHHHHHHHHCCEEE
T ss_pred HhcC----CCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEeChHHHHhhHHHHHHHHHHcCCEEE
Confidence 5542 46999999988889999999999999999983211111223456666666555443
No 140
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=97.87 E-value=0.00011 Score=66.34 Aligned_cols=114 Identities=15% Similarity=0.147 Sum_probs=77.2
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEc
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDF 113 (257)
.|.||+++| .|.||..+++.+.+ .++++. ++|+.. ..+..+. ..|....+++.++.+ .+|+||-.
T Consensus 2 ~M~kIgfIG-lG~MG~~mA~~L~~-~G~~v~-v~dr~~--~~~~~l~----~~Ga~~a~s~~e~~~------~~dvv~~~ 66 (300)
T 3obb_A 2 HMKQIAFIG-LGHMGAPMATNLLK-AGYLLN-VFDLVQ--SAVDGLV----AAGASAARSARDAVQ------GADVVISM 66 (300)
T ss_dssp -CCEEEEEC-CSTTHHHHHHHHHH-TTCEEE-EECSSH--HHHHHHH----HTTCEECSSHHHHHT------TCSEEEEC
T ss_pred CcCEEEEee-ehHHHHHHHHHHHh-CCCeEE-EEcCCH--HHHHHHH----HcCCEEcCCHHHHHh------cCCceeec
Confidence 367999999 69999999999874 578765 577531 1122332 346778889999885 78987754
Q ss_pred -CChHhHHHHHHH------HHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEcc
Q 025154 114 -TDASTVYDNVKQ------ATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAP 163 (257)
Q Consensus 114 -T~p~~~~~~~~~------a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~sp 163 (257)
+.++.+.+.+.. .++.|. +||-+|..+++..+++.+.+++.|+..+=+|
T Consensus 67 l~~~~~v~~V~~~~~g~~~~~~~g~-iiId~sT~~p~~~~~~a~~~~~~G~~~lDaP 122 (300)
T 3obb_A 67 LPASQHVEGLYLDDDGLLAHIAPGT-LVLECSTIAPTSARKIHAAARERGLAMLDAP 122 (300)
T ss_dssp CSCHHHHHHHHHSSSSSTTSCCC-C-EEEECSCCCHHHHHHHHHHHHTTTCEEEECC
T ss_pred CCchHHHHHHHhchhhhhhcCCCCC-EEEECCCCCHHHHHHHHHHHHHcCCEEEecC
Confidence 345555555432 112233 5555555678888889999988888877665
No 141
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=97.87 E-value=1.8e-05 Score=72.80 Aligned_cols=96 Identities=25% Similarity=0.256 Sum_probs=63.3
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecC-------------CCCcchhhhh--c--C-CCCCCeeeec--CH
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH-------------SVGEDIGMVC--D--M-EQPLEIPVMS--DL 94 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~-------------~~g~d~g~~~--g--~-~~~~gv~v~~--dl 94 (257)
|+||||+|+ |++|+.+++++.++|+++++++-+.. ..|+-.+++. + + .....+.++. |+
T Consensus 1 mikVgI~G~-G~iGr~l~R~l~~~~~veivain~~~~~~~~~~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~dp 79 (334)
T 3cmc_O 1 AVKVGINGF-GRIGRNVFRAALKNPDIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERDP 79 (334)
T ss_dssp CEEEEEESC-SHHHHHHHHHHTTCTTEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred CeEEEEECC-CHHHHHHHHHHhCCCCeEEEEEeCCCCHHHHHHHhccCCcCCCcCceEEEccCcEEECCEEEEEEecCCh
Confidence 689999998 99999999999999999999988741 1111100000 0 0 0001244442 55
Q ss_pred HHHH-hccccCCCccEEEEcCChHhHHHHHHHHHHcCCC-eEE
Q 025154 95 TMVL-GSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVV 135 (257)
Q Consensus 95 ~~~l-~~~~~~~~~DVvIDFT~p~~~~~~~~~a~~~Gi~-vVi 135 (257)
+++- .+ .++|+|++.|......+.+...++.|.. +||
T Consensus 80 ~~i~w~~----~~vDvV~~atg~~~s~e~a~~~l~~Gak~vVI 118 (334)
T 3cmc_O 80 ENLAWGE----IGVDIVVESTGRFTKREDAAKHLEAGAKKVII 118 (334)
T ss_dssp GGCCTGG----GTCCEEEECSSSCCBHHHHTHHHHTTCSEEEE
T ss_pred hhcCccc----CccCEEEECCCchhhHHHHHHHHHCCCCEEEE
Confidence 5441 11 2689999988878888899999999973 444
No 142
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=97.86 E-value=0.00015 Score=57.09 Aligned_cols=35 Identities=23% Similarity=0.290 Sum_probs=31.3
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH 70 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~ 70 (257)
+.||+|+|+ |.+|+.+++.+...++++++|.+|..
T Consensus 4 ~~~vlIiGa-G~~g~~l~~~l~~~~g~~vvg~~d~~ 38 (141)
T 3nkl_A 4 KKKVLIYGA-GSAGLQLANMLRQGKEFHPIAFIDDD 38 (141)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHSSSEEEEEEECSC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCcEEEEEEECC
Confidence 468999995 99999999999888899999999853
No 143
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=97.85 E-value=0.00011 Score=68.68 Aligned_cols=94 Identities=14% Similarity=0.078 Sum_probs=67.0
Q ss_pred CCceEEEEcCCChHHHHHHH-HHHhcC--CcEEEEEEecCCCCcchhhhhcCCCCCCeeee--cCHHHHHhccccCCCcc
Q 025154 34 SNIKVIINGAVKEIGRAAVI-AVTKAR--GMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVM--SDLTMVLGSISQSKARA 108 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~-~i~~~~--~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~--~dl~~~l~~~~~~~~~D 108 (257)
+++||+|+||||-.|+.+++ ++.++| ..+++.+..+ ..|+...++.+. ...+. ++.++ ++ ++|
T Consensus 3 ~~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~-~aG~~~~~~~~~----~~~v~~~~~~~~-~~------~vD 70 (377)
T 3uw3_A 3 GSMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTS-NAGGKAPSFAKN----ETTLKDATSIDD-LK------KCD 70 (377)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS-CTTSBCCTTCCS----CCBCEETTCHHH-HH------TCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEech-hcCCCHHHcCCC----ceEEEeCCChhH-hc------CCC
Confidence 56899999999999999999 888887 6888776554 556655444321 22332 24444 33 799
Q ss_pred EEEEcCChHhHHHHHHHHHHcCCC-eEEeCCC
Q 025154 109 VVIDFTDASTVYDNVKQATAFGMR-SVVYVPH 139 (257)
Q Consensus 109 VvIDFT~p~~~~~~~~~a~~~Gi~-vViGTTG 139 (257)
+|+..+....+.+.+..+++.|+. +||-.++
T Consensus 71 vvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss 102 (377)
T 3uw3_A 71 VIITCQGGDYTNDVFPKLRAAGWNGYWIDAAS 102 (377)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred EEEECCChHHHHHHHHHHHHCCCCEEEEeCCc
Confidence 999777777778999999999973 5665543
No 144
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=97.85 E-value=0.0001 Score=66.13 Aligned_cols=118 Identities=12% Similarity=0.068 Sum_probs=74.3
Q ss_pred CCCCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEE
Q 025154 32 PQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVI 111 (257)
Q Consensus 32 ~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvI 111 (257)
...++||+|+| .|.||+.+++.+.+ .++++. ++|+.. .....+. ..|+..+++++++++ .+|+||
T Consensus 6 ~~~~~~IgiIG-~G~mG~~~A~~l~~-~G~~V~-~~dr~~--~~~~~~~----~~g~~~~~~~~e~~~------~aDvVi 70 (306)
T 3l6d_A 6 ESFEFDVSVIG-LGAMGTIMAQVLLK-QGKRVA-IWNRSP--GKAAALV----AAGAHLCESVKAALS------ASPATI 70 (306)
T ss_dssp CCCSCSEEEEC-CSHHHHHHHHHHHH-TTCCEE-EECSSH--HHHHHHH----HHTCEECSSHHHHHH------HSSEEE
T ss_pred ccCCCeEEEEC-CCHHHHHHHHHHHH-CCCEEE-EEeCCH--HHHHHHH----HCCCeecCCHHHHHh------cCCEEE
Confidence 34568999999 59999999998875 577765 466531 1122222 235677889999886 689988
Q ss_pred EcCChHh-HHHHHH----HHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCc
Q 025154 112 DFTDAST-VYDNVK----QATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTL 165 (257)
Q Consensus 112 DFT~p~~-~~~~~~----~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNf 165 (257)
-...+.. +.+.+. ..+..|.-+ +-++..+.+..+++.+..++.|+.++-+|-+
T Consensus 71 ~~vp~~~~~~~v~~~~~l~~~~~g~iv-id~st~~~~~~~~l~~~~~~~g~~~vdapv~ 128 (306)
T 3l6d_A 71 FVLLDNHATHEVLGMPGVARALAHRTI-VDYTTNAQDEGLALQGLVNQAGGHYVKGMIV 128 (306)
T ss_dssp ECCSSHHHHHHHHTSTTHHHHTTTCEE-EECCCCCTTHHHHHHHHHHHTTCEEEEEEEE
T ss_pred EEeCCHHHHHHHhcccchhhccCCCEE-EECCCCCHHHHHHHHHHHHHcCCeEEecccc
Confidence 7765333 443332 123445444 4444455556667777777767777665443
No 145
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=97.84 E-value=2.9e-05 Score=71.54 Aligned_cols=100 Identities=23% Similarity=0.209 Sum_probs=65.6
Q ss_pred CceEEEEcCCChHHHHHHHHHHh---cCCcEEEEEEecC-------------CCCcchhhhh--c--C-CCCCCeeee--
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTK---ARGMEVAGAIDSH-------------SVGEDIGMVC--D--M-EQPLEIPVM-- 91 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~---~~~~eLvg~vd~~-------------~~g~d~g~~~--g--~-~~~~gv~v~-- 91 (257)
|+||+|+|+ |++|+.+++++.+ +|+++|+++.+.. ..|+-.+++. + + .....+.++
T Consensus 2 ~ikVgI~G~-G~iGr~l~r~l~~~~~~~~~eivai~~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~ 80 (339)
T 2x5j_O 2 TVRVAINGF-GRIGRNVVRALYESGRRAEITVVAINELADAAGMAHLLKYDTSHGRFAWEVRQERDQLFVGDDAIRVLHE 80 (339)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHTSGGGTEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECC
T ss_pred CeEEEEECc-CHHHHHHHHHHHcCCCCCCEEEEEEeCCCCHHHHHHHhcccccCCCCCceEEEcCCeeEECCEEEEEEec
Confidence 489999997 9999999999988 8999999988731 0111110000 0 0 000123444
Q ss_pred cCHHHHH-hccccCCCccEEEEcCChHhHHHHHHHHHHcCCC-eEEeCCC
Q 025154 92 SDLTMVL-GSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVVYVPH 139 (257)
Q Consensus 92 ~dl~~~l-~~~~~~~~~DVvIDFT~p~~~~~~~~~a~~~Gi~-vViGTTG 139 (257)
.|++++. .+ .++|+|++.|......+.+...++.|.. +||-.++
T Consensus 81 ~dp~~l~~~~----~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~a 126 (339)
T 2x5j_O 81 RSLQSLPWRE----LGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPG 126 (339)
T ss_dssp SSGGGCCHHH----HTCSEEEECSSSCCSHHHHHHHHHTTCSEEEESSCC
T ss_pred CChHHCcccc----cCCCEEEECCCccccHHHHHHHHHcCCCEEEEeccc
Confidence 3555431 11 2689999999888888999999999988 5555554
No 146
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=97.84 E-value=5e-05 Score=63.70 Aligned_cols=120 Identities=10% Similarity=0.064 Sum_probs=70.9
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcC-C---CCCCeeeecCHHHHHhccccCCCccEEE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDM-E---QPLEIPVMSDLTMVLGSISQSKARAVVI 111 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~-~---~~~gv~v~~dl~~~l~~~~~~~~~DVvI 111 (257)
|||+|+|++|.||+.+++.+.+ .++++.. +++.. .....+... + ....+. .++++++++ ++|+||
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~-~g~~V~~-~~r~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~------~~D~Vi 69 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLAT-LGHEIVV-GSRRE--EKAEAKAAEYRRIAGDASIT-GMKNEDAAE------ACDIAV 69 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHT-TTCEEEE-EESSH--HHHHHHHHHHHHHHSSCCEE-EEEHHHHHH------HCSEEE
T ss_pred CeEEEEcCCCHHHHHHHHHHHH-CCCEEEE-EeCCH--HHHHHHHHHhccccccCCCC-hhhHHHHHh------cCCEEE
Confidence 5899999679999999998875 5677664 55431 111111100 0 001233 467777775 699999
Q ss_pred EcCChHhHHHHHHHHHH--cCCCeEEeCCCCCH-----------HHHHHHHHHhhhcCceEEEc-cCchHH
Q 025154 112 DFTDASTVYDNVKQATA--FGMRSVVYVPHIQL-----------ETVSALSAFCDKASMGCLIA-PTLSIG 168 (257)
Q Consensus 112 DFT~p~~~~~~~~~a~~--~Gi~vViGTTG~s~-----------e~~~~L~~~a~~~gipvl~s-pNfSlG 168 (257)
..+.+....+.+....+ .+..+|.-++|++. ...++|.+.... ..++.+ +|++..
T Consensus 70 ~~~~~~~~~~~~~~l~~~~~~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~--~~~v~~~~~~~~~ 138 (212)
T 1jay_A 70 LTIPWEHAIDTARDLKNILREKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLES--EKVVSALHTIPAA 138 (212)
T ss_dssp ECSCHHHHHHHHHHTHHHHTTSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTC--SCEEECCTTCCHH
T ss_pred EeCChhhHHHHHHHHHHHcCCCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCC--CeEEEEccchHHH
Confidence 98887776655543221 36667777777762 113445554433 566665 344433
No 147
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=97.80 E-value=0.0002 Score=64.65 Aligned_cols=112 Identities=11% Similarity=0.047 Sum_probs=71.2
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCC-cEEEEEEecCCC--C---cchhhhhcCCCCCCeeeec-CHHHHHhccccCCC
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARG-MEVAGAIDSHSV--G---EDIGMVCDMEQPLEIPVMS-DLTMVLGSISQSKA 106 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~-~eLvg~vd~~~~--g---~d~g~~~g~~~~~gv~v~~-dl~~~l~~~~~~~~ 106 (257)
.++||+|+| +|.||..+++.+.. .+ +++. ++|+... . .....+. ..|+ ++ +++++++ +
T Consensus 23 M~m~IgvIG-~G~mG~~lA~~L~~-~G~~~V~-~~dr~~~~~~~~~~~~~~~~----~~g~--~~~s~~e~~~------~ 87 (317)
T 4ezb_A 23 MMTTIAFIG-FGEAAQSIAGGLGG-RNAARLA-AYDLRFNDPAASGALRARAA----ELGV--EPLDDVAGIA------C 87 (317)
T ss_dssp SCCEEEEEC-CSHHHHHHHHHHHT-TTCSEEE-EECGGGGCTTTHHHHHHHHH----HTTC--EEESSGGGGG------G
T ss_pred cCCeEEEEC-ccHHHHHHHHHHHH-cCCCeEE-EEeCCCccccchHHHHHHHH----HCCC--CCCCHHHHHh------c
Confidence 357999999 59999999998874 46 7766 5665310 0 0111121 2344 55 7777775 6
Q ss_pred ccEEEEcCChHhHHHHHHHHHHc--CCCeEEeCCCCCHHHHHHHHHHhhhcCceEE
Q 025154 107 RAVVIDFTDASTVYDNVKQATAF--GMRSVVYVPHIQLETVSALSAFCDKASMGCL 160 (257)
Q Consensus 107 ~DVvIDFT~p~~~~~~~~~a~~~--Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl 160 (257)
+|+||-...+....+.+...... .-.+|+-+++.++...+++.+..++.|+..+
T Consensus 88 aDvVi~avp~~~~~~~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~ 143 (317)
T 4ezb_A 88 ADVVLSLVVGAATKAVAASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFV 143 (317)
T ss_dssp CSEEEECCCGGGHHHHHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEE
T ss_pred CCEEEEecCCHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEE
Confidence 89999877777666666544432 1235666666667777777777766565544
No 148
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=97.79 E-value=0.00013 Score=67.96 Aligned_cols=92 Identities=14% Similarity=0.005 Sum_probs=65.3
Q ss_pred ceEEEEcCCChHHHHHHH-HHHhcC--CcEEEEEEecCCCCcchhhhhcCCCCCCeeee--cCHHHHHhccccCCCccEE
Q 025154 36 IKVIINGAVKEIGRAAVI-AVTKAR--GMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVM--SDLTMVLGSISQSKARAVV 110 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~-~i~~~~--~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~--~dl~~~l~~~~~~~~~DVv 110 (257)
|||+|+||||-.|+.+++ ++.++| ..+++.+..+. .|+...++.+. ...+. ++.++ ++ ++|+|
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~-aG~~~~~~~~~----~~~~~~~~~~~~-~~------~~Dvv 68 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ-IGVPAPNFGKD----AGMLHDAFDIES-LK------QLDAV 68 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBCCCSSSC----CCBCEETTCHHH-HT------TCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccc-cCcCHHHhCCC----ceEEEecCChhH-hc------cCCEE
Confidence 699999999999999999 888888 67888765543 56655443321 22332 24444 43 79999
Q ss_pred EEcCChHhHHHHHHHHHHcCC-CeEEeCCC
Q 025154 111 IDFTDASTVYDNVKQATAFGM-RSVVYVPH 139 (257)
Q Consensus 111 IDFT~p~~~~~~~~~a~~~Gi-~vViGTTG 139 (257)
+..+....+.+.+..+++.|. .+||-.++
T Consensus 69 f~a~~~~~s~~~~~~~~~~G~k~~VID~ss 98 (370)
T 3pzr_A 69 ITCQGGSYTEKVYPALRQAGWKGYWIDAAS 98 (370)
T ss_dssp EECSCHHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred EECCChHHHHHHHHHHHHCCCCEEEEeCCc
Confidence 977777777899999999997 35655543
No 149
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=97.77 E-value=6.6e-05 Score=69.36 Aligned_cols=92 Identities=14% Similarity=0.096 Sum_probs=66.7
Q ss_pred ceEEEEcCCChHHHHHHHHHHhc--CCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEc
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKA--RGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~--~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDF 113 (257)
|||+|+||+|-.|+.+++++.++ |..+|+.+......|+... +.+ ..+.+.+--.+.+ .++|+|+..
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~-~~~----~~~~~~~~~~~~~------~~~Dvvf~a 70 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLA-FRG----QEIEVEDAETADP------SGLDIALFS 70 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEE-ETT----EEEEEEETTTSCC------TTCSEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCcee-ecC----CceEEEeCCHHHh------ccCCEEEEC
Confidence 79999999999999999998887 8888988776556666554 221 1223321111223 278999988
Q ss_pred CChHhHHHHHHHHHHcCCCeEEeCC
Q 025154 114 TDASTVYDNVKQATAFGMRSVVYVP 138 (257)
Q Consensus 114 T~p~~~~~~~~~a~~~Gi~vViGTT 138 (257)
+....+.+.+..+++.|+.+|--+.
T Consensus 71 ~~~~~s~~~a~~~~~~G~~vID~Sa 95 (344)
T 3tz6_A 71 AGSAMSKVQAPRFAAAGVTVIDNSS 95 (344)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEECSS
T ss_pred CChHHHHHHHHHHHhCCCEEEECCC
Confidence 8888889999999999998776544
No 150
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=97.77 E-value=0.00019 Score=68.28 Aligned_cols=129 Identities=12% Similarity=0.082 Sum_probs=83.5
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCC-Ceee----e---cCHHHHHhccccCCC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPL-EIPV----M---SDLTMVLGSISQSKA 106 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~-gv~v----~---~dl~~~l~~~~~~~~ 106 (257)
+.+|+|+| +|.||+.+++.+.+ .+.+ +.++++.. ..+..+.. .. ++.. . ++++++++ +
T Consensus 3 ~k~VlViG-aG~iG~~ia~~L~~-~G~~-V~v~~R~~--~~a~~la~---~~~~~~~~~~Dv~d~~~l~~~l~------~ 68 (450)
T 1ff9_A 3 TKSVLMLG-SGFVTRPTLDVLTD-SGIK-VTVACRTL--ESAKKLSA---GVQHSTPISLDVNDDAALDAEVA------K 68 (450)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHT-TTCE-EEEEESSH--HHHHHTTT---TCTTEEEEECCTTCHHHHHHHHT------T
T ss_pred CCEEEEEC-CCHHHHHHHHHHHh-CcCE-EEEEECCH--HHHHHHHH---hcCCceEEEeecCCHHHHHHHHc------C
Confidence 46899999 59999999998875 6777 44566431 11222221 11 1211 1 23445563 7
Q ss_pred ccEEEEcCChHhHHHHHHHHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCchHHHH--HHHHHHHHh
Q 025154 107 RAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSI--LLQQAAISA 179 (257)
Q Consensus 107 ~DVvIDFT~p~~~~~~~~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfSlGvn--ll~~~a~~l 179 (257)
+|+||..+.+.........|++.|++++.- +-..+ ....+.++|+++|+.++...+|.-|+. ++.+++...
T Consensus 69 ~DvVIn~a~~~~~~~i~~a~l~~g~~vvd~-~~~~~-~~~~l~~aA~~aGv~~i~g~g~~pg~~~~~a~~li~q~ 141 (450)
T 1ff9_A 69 HDLVISLIPYTFHATVIKSAIRQKKHVVTT-SYVSP-AMMELDQAAKDAGITVMNEIGLDPGIDHLYAIKTIEEV 141 (450)
T ss_dssp SSEEEECCC--CHHHHHHHHHHHTCEEEES-SCCCH-HHHHTHHHHHHTTCEEECSCBBTTBHHHHHHHHHHHHH
T ss_pred CcEEEECCccccchHHHHHHHhCCCeEEEe-ecccH-HHHHHHHHHHHCCCeEEeCCCCcCchHHHHHHHHHHHh
Confidence 999999887666666778889999998753 33444 446788888999999998888866663 345555444
No 151
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=97.76 E-value=0.00021 Score=62.85 Aligned_cols=112 Identities=12% Similarity=0.159 Sum_probs=67.0
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcC-CcEEEEEEecCCCCcchhhhhcCCCCCCe--eeecCHHHHHhccccCCCccEEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKAR-GMEVAGAIDSHSVGEDIGMVCDMEQPLEI--PVMSDLTMVLGSISQSKARAVVI 111 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~-~~eLvg~vd~~~~g~d~g~~~g~~~~~gv--~v~~dl~~~l~~~~~~~~~DVvI 111 (257)
|+||+|+| +|.||+.+++.+.... +.++. ++|+.. .....+. ..|+ ..+.++++++. ++|+||
T Consensus 6 ~~~I~iIG-~G~mG~~~a~~l~~~g~~~~V~-~~d~~~--~~~~~~~----~~g~~~~~~~~~~~~~~------~aDvVi 71 (290)
T 3b1f_A 6 EKTIYIAG-LGLIGASLALGIKRDHPHYKIV-GYNRSD--RSRDIAL----ERGIVDEATADFKVFAA------LADVII 71 (290)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHHCTTSEEE-EECSSH--HHHHHHH----HTTSCSEEESCTTTTGG------GCSEEE
T ss_pred cceEEEEe-eCHHHHHHHHHHHhCCCCcEEE-EEcCCH--HHHHHHH----HcCCcccccCCHHHhhc------CCCEEE
Confidence 57999999 5999999999887653 56654 566431 1122221 1233 35667777764 699999
Q ss_pred EcCChHhHHHHHHHHHHc---CCCeEEeCCCCCHHHHHHHHHHhhhcCceEE
Q 025154 112 DFTDASTVYDNVKQATAF---GMRSVVYVPHIQLETVSALSAFCDKASMGCL 160 (257)
Q Consensus 112 DFT~p~~~~~~~~~a~~~---Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl 160 (257)
-...|....+.+...... .-.+|+-+++......+.+.++..+.++.++
T Consensus 72 lavp~~~~~~v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~~v 123 (290)
T 3b1f_A 72 LAVPIKKTIDFIKILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQFV 123 (290)
T ss_dssp ECSCHHHHHHHHHHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCEEE
T ss_pred EcCCHHHHHHHHHHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCEEE
Confidence 888888777777665443 1235553444333333556555443234443
No 152
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=97.74 E-value=0.00036 Score=62.63 Aligned_cols=115 Identities=14% Similarity=0.146 Sum_probs=75.4
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcCC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT~ 115 (257)
-||+++| .|.||..+++.+.+ .+++++ ++|+.. .....+. +.|..+.+++.++.+ .+||||-.-.
T Consensus 6 ~kIgfIG-LG~MG~~mA~~L~~-~G~~V~-v~dr~~--~~~~~l~----~~G~~~~~s~~e~~~------~~dvvi~~l~ 70 (297)
T 4gbj_A 6 EKIAFLG-LGNLGTPIAEILLE-AGYELV-VWNRTA--SKAEPLT----KLGATVVENAIDAIT------PGGIVFSVLA 70 (297)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHH-TTCEEE-EC---------CTTT----TTTCEECSSGGGGCC------TTCEEEECCS
T ss_pred CcEEEEe-cHHHHHHHHHHHHH-CCCeEE-EEeCCH--HHHHHHH----HcCCeEeCCHHHHHh------cCCceeeecc
Confidence 3899999 69999999999874 688876 467431 1112222 457788889999885 7898876543
Q ss_pred -hHhHHHH----HHHHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCch
Q 025154 116 -ASTVYDN----VKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLS 166 (257)
Q Consensus 116 -p~~~~~~----~~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfS 166 (257)
+....+. +...+..|. +||-++..+++..+++.+.+++.|+..+=+|=+.
T Consensus 71 ~~~~~~~v~~~~~~~~~~~~~-iiid~sT~~p~~~~~~~~~~~~~g~~~ldapVsG 125 (297)
T 4gbj_A 71 DDAAVEELFSMELVEKLGKDG-VHVSMSTISPETSRQLAQVHEWYGAHYVGAPIFA 125 (297)
T ss_dssp SHHHHHHHSCHHHHHHHCTTC-EEEECSCCCHHHHHHHHHHHHHTTCEEEECCEEC
T ss_pred chhhHHHHHHHHHHhhcCCCe-EEEECCCCChHHHHHHHHHHHhcCCceecCCcCC
Confidence 3333332 233344444 4555555668888889999998898888777543
No 153
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=97.73 E-value=4.2e-05 Score=66.23 Aligned_cols=98 Identities=9% Similarity=0.110 Sum_probs=63.7
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCc----EEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGM----EVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVV 110 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~----eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVv 110 (257)
|+||+|+| +|+||+.+++.+.+. ++ ++. ++|+.. ..+..+. ...|+.++++++++++ ++|+|
T Consensus 2 ~~~i~iIG-~G~mG~~~a~~l~~~-g~~~~~~V~-~~~r~~--~~~~~~~---~~~g~~~~~~~~e~~~------~aDvV 67 (247)
T 3gt0_A 2 DKQIGFIG-CGNMGMAMIGGMINK-NIVSSNQII-CSDLNT--ANLKNAS---EKYGLTTTTDNNEVAK------NADIL 67 (247)
T ss_dssp CCCEEEEC-CSHHHHHHHHHHHHT-TSSCGGGEE-EECSCH--HHHHHHH---HHHCCEECSCHHHHHH------HCSEE
T ss_pred CCeEEEEC-ccHHHHHHHHHHHhC-CCCCCCeEE-EEeCCH--HHHHHHH---HHhCCEEeCChHHHHH------hCCEE
Confidence 57999999 599999999988754 44 544 566531 1122222 1246778889999885 69999
Q ss_pred EEcCChHhHHHHHHHHH---HcCCCeEEeCCCCCHHHHH
Q 025154 111 IDFTDASTVYDNVKQAT---AFGMRSVVYVPHIQLETVS 146 (257)
Q Consensus 111 IDFT~p~~~~~~~~~a~---~~Gi~vViGTTG~s~e~~~ 146 (257)
|-.+.|....+.+.... +.+.-+|.-+.|.+.++++
T Consensus 68 ilav~~~~~~~v~~~l~~~l~~~~~vvs~~~gi~~~~l~ 106 (247)
T 3gt0_A 68 ILSIKPDLYASIINEIKEIIKNDAIIVTIAAGKSIESTE 106 (247)
T ss_dssp EECSCTTTHHHHC---CCSSCTTCEEEECSCCSCHHHHH
T ss_pred EEEeCHHHHHHHHHHHHhhcCCCCEEEEecCCCCHHHHH
Confidence 98888877777665443 2344445456688865443
No 154
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=97.68 E-value=0.00016 Score=62.47 Aligned_cols=92 Identities=10% Similarity=0.046 Sum_probs=63.2
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCC---cEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARG---MEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVI 111 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~---~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvI 111 (257)
+|||+|+|+ |.||+.+++.+..... .++ .++|+... ..|+.++++++++++ ++|+||
T Consensus 4 ~m~i~iiG~-G~mG~~~a~~l~~~g~~~~~~v-~~~~~~~~------------~~g~~~~~~~~~~~~------~~D~vi 63 (262)
T 2rcy_A 4 NIKLGFMGL-GQMGSALAHGIANANIIKKENL-FYYGPSKK------------NTTLNYMSSNEELAR------HCDIIV 63 (262)
T ss_dssp SSCEEEECC-SHHHHHHHHHHHHHTSSCGGGE-EEECSSCC------------SSSSEECSCHHHHHH------HCSEEE
T ss_pred CCEEEEECc-CHHHHHHHHHHHHCCCCCCCeE-EEEeCCcc------------cCceEEeCCHHHHHh------cCCEEE
Confidence 479999995 9999999998875431 444 45665321 135667778888875 699999
Q ss_pred EcCChHhHHHHHHHHHH--cCCCeEEeCCCCCHHHHH
Q 025154 112 DFTDASTVYDNVKQATA--FGMRSVVYVPHIQLETVS 146 (257)
Q Consensus 112 DFT~p~~~~~~~~~a~~--~Gi~vViGTTG~s~e~~~ 146 (257)
-...|....+.+..... .+..+|+-+.|++.+.++
T Consensus 64 ~~v~~~~~~~v~~~l~~~l~~~~vv~~~~gi~~~~l~ 100 (262)
T 2rcy_A 64 CAVKPDIAGSVLNNIKPYLSSKLLISICGGLNIGKLE 100 (262)
T ss_dssp ECSCTTTHHHHHHHSGGGCTTCEEEECCSSCCHHHHH
T ss_pred EEeCHHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHH
Confidence 88887777766655433 244566667788876433
No 155
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=97.68 E-value=0.00022 Score=60.76 Aligned_cols=121 Identities=13% Similarity=0.062 Sum_probs=69.3
Q ss_pred CCCCCCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccE
Q 025154 30 NPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAV 109 (257)
Q Consensus 30 ~~~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DV 109 (257)
.|+..++||+|+| +|.||+.+++.+.. .++++. ++++.. .....+. ..++.++ +++++++ ++|+
T Consensus 23 ~~~~~~~~I~iiG-~G~~G~~la~~l~~-~g~~V~-~~~r~~--~~~~~~~----~~g~~~~-~~~~~~~------~~Dv 86 (215)
T 2vns_A 23 KVPDEAPKVGILG-SGDFARSLATRLVG-SGFKVV-VGSRNP--KRTARLF----PSAAQVT-FQEEAVS------SPEV 86 (215)
T ss_dssp ------CCEEEEC-CSHHHHHHHHHHHH-TTCCEE-EEESSH--HHHHHHS----BTTSEEE-EHHHHTT------SCSE
T ss_pred CCCCCCCEEEEEc-cCHHHHHHHHHHHH-CCCEEE-EEeCCH--HHHHHHH----HcCCcee-cHHHHHh------CCCE
Confidence 3555578999999 59999999998875 467765 466531 1122222 2255555 7777774 7999
Q ss_pred EEEcCChHhHHHHH--HHHHHcCCCeEEeCCCCCHHHH-------HHHHHHhhhcCceEEEccCchHHH
Q 025154 110 VIDFTDASTVYDNV--KQATAFGMRSVVYVPHIQLETV-------SALSAFCDKASMGCLIAPTLSIGS 169 (257)
Q Consensus 110 vIDFT~p~~~~~~~--~~a~~~Gi~vViGTTG~s~e~~-------~~L~~~a~~~gipvl~spNfSlGv 169 (257)
||..+.+....+.+ .... .+..+|.-++|.+.+.+ +.+++... +.+++.+-|+--+.
T Consensus 87 Vi~av~~~~~~~v~~l~~~~-~~~~vv~~s~g~~~~~l~~~~~~~~~l~~~l~--~~~vv~~~n~~~~~ 152 (215)
T 2vns_A 87 IFVAVFREHYSSLCSLSDQL-AGKILVDVSNPTEQEHLQHRESNAEYLASLFP--TCTVVKAFNVISAW 152 (215)
T ss_dssp EEECSCGGGSGGGGGGHHHH-TTCEEEECCCCCHHHHHHCSSCHHHHHHHHCT--TSEEEEECTTBCHH
T ss_pred EEECCChHHHHHHHHHHHhc-CCCEEEEeCCCcccccccccccHHHHHHHHCC--CCeEEeccccccHh
Confidence 99877664432222 2233 56667766778765432 22333332 24677666764443
No 156
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=97.67 E-value=0.0002 Score=64.61 Aligned_cols=98 Identities=11% Similarity=0.064 Sum_probs=64.8
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCC----cEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARG----MEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVV 110 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~----~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVv 110 (257)
+|||+|+|+ |.||..++..+.+. + .++. ++++......+..+. ..|+.+.++..+++. .+|+|
T Consensus 22 ~mkI~iIG~-G~mG~ala~~L~~~-G~~~~~~V~-v~~r~~~~~~~~~l~----~~G~~~~~~~~e~~~------~aDvV 88 (322)
T 2izz_A 22 SMSVGFIGA-GQLAFALAKGFTAA-GVLAAHKIM-ASSPDMDLATVSALR----KMGVKLTPHNKETVQ------HSDVL 88 (322)
T ss_dssp CCCEEEESC-SHHHHHHHHHHHHT-TSSCGGGEE-EECSCTTSHHHHHHH----HHTCEEESCHHHHHH------HCSEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHHC-CCCCcceEE-EECCCccHHHHHHHH----HcCCEEeCChHHHhc------cCCEE
Confidence 579999995 99999999988754 4 5554 566532101222232 346777788888875 69999
Q ss_pred EEcCChHhHHHHHHHHHH---cCCCeEEeCCCCCHHHH
Q 025154 111 IDFTDASTVYDNVKQATA---FGMRSVVYVPHIQLETV 145 (257)
Q Consensus 111 IDFT~p~~~~~~~~~a~~---~Gi~vViGTTG~s~e~~ 145 (257)
|-...|....+.+..... .+.-+|.-++|++.+++
T Consensus 89 ilav~~~~~~~vl~~l~~~l~~~~ivvs~s~gi~~~~l 126 (322)
T 2izz_A 89 FLAVKPHIIPFILDEIGADIEDRHIVVSCAAGVTISSI 126 (322)
T ss_dssp EECSCGGGHHHHHHHHGGGCCTTCEEEECCTTCCHHHH
T ss_pred EEEeCHHHHHHHHHHHHhhcCCCCEEEEeCCCCCHHHH
Confidence 988888877777765433 24444444568886543
No 157
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=97.65 E-value=6.6e-05 Score=69.01 Aligned_cols=95 Identities=22% Similarity=0.199 Sum_probs=62.4
Q ss_pred ceEEEEcCCChHHHHHHHHHHhc--CCcEEEEEEecC-------------CCCcchhhhhcCC-----CCCCeeeec--C
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKA--RGMEVAGAIDSH-------------SVGEDIGMVCDME-----QPLEIPVMS--D 93 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~--~~~eLvg~vd~~-------------~~g~d~g~~~g~~-----~~~gv~v~~--d 93 (257)
+||+|+|+ |++|+.+++++.++ |+++|+++-|.. ..|+-.+++.-.+ ....+.++. |
T Consensus 1 ~kVgI~G~-G~iGr~llR~l~~~~~p~~eivain~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~d 79 (332)
T 1hdg_O 1 ARVAINGF-GRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPD 79 (332)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred CEEEEEcc-CHHHHHHHHHHHhCCCCCeEEEEEEcCCChHHhhhhccCcCcCCCcCCcEEEcCCEEEECCeEEEEEecCC
Confidence 58999998 99999999999988 999999987731 1122111100000 001244442 5
Q ss_pred HHHH-HhccccCCCccEEEEcCChHhHHHHHHHHHHcCCC-eEE
Q 025154 94 LTMV-LGSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVV 135 (257)
Q Consensus 94 l~~~-l~~~~~~~~~DVvIDFT~p~~~~~~~~~a~~~Gi~-vVi 135 (257)
++++ ..+ .++|+|++.|......+.+...++.|.. +||
T Consensus 80 p~~l~w~~----~~vDvV~~atg~~~s~e~a~~~l~aGakkvVI 119 (332)
T 1hdg_O 80 PSKLPWKD----LGVDFVIESTGVFRNREKAELHLQAGAKKVII 119 (332)
T ss_dssp GGGSCHHH----HTCCEEEECSSSCCBHHHHTHHHHTTCSEEEE
T ss_pred hHHCcccc----cCCCEEEECCccchhHHHHHHHHHcCCcEEEE
Confidence 5544 111 2689999988877788899999999983 444
No 158
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=97.63 E-value=0.00028 Score=62.87 Aligned_cols=115 Identities=13% Similarity=0.124 Sum_probs=71.0
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeee-ecCHHHHHhccccCCCccEEEE
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-MSDLTMVLGSISQSKARAVVID 112 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v-~~dl~~~l~~~~~~~~~DVvID 112 (257)
.++||+|+| +|.||+.+++.+.+ .++++. ++|+.. ..+..+. ..|+.. +++++++++ .+|+||-
T Consensus 6 ~~~~I~iIG-~G~mG~~~a~~l~~-~G~~V~-~~dr~~--~~~~~~~----~~g~~~~~~~~~e~~~------~aDvvi~ 70 (303)
T 3g0o_A 6 TDFHVGIVG-LGSMGMGAARSCLR-AGLSTW-GADLNP--QACANLL----AEGACGAAASAREFAG------VVDALVI 70 (303)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHHH-TTCEEE-EECSCH--HHHHHHH----HTTCSEEESSSTTTTT------TCSEEEE
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHH-CCCeEE-EEECCH--HHHHHHH----HcCCccccCCHHHHHh------cCCEEEE
Confidence 357999999 59999999998875 577765 456531 1122222 234555 778888874 7999987
Q ss_pred cCChHh-HHHHH---H---HHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccC
Q 025154 113 FTDAST-VYDNV---K---QATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPT 164 (257)
Q Consensus 113 FT~p~~-~~~~~---~---~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spN 164 (257)
...+.. ....+ . ..++.|.-+ +-++..+....+++.+..++.|+.++-+|-
T Consensus 71 ~vp~~~~~~~v~~~~~~l~~~l~~g~iv-v~~st~~~~~~~~~~~~~~~~g~~~~~~pv 128 (303)
T 3g0o_A 71 LVVNAAQVRQVLFGEDGVAHLMKPGSAV-MVSSTISSADAQEIAAALTALNLNMLDAPV 128 (303)
T ss_dssp CCSSHHHHHHHHC--CCCGGGSCTTCEE-EECSCCCHHHHHHHHHHHHTTTCEEEECCE
T ss_pred ECCCHHHHHHHHhChhhHHhhCCCCCEE-EecCCCCHHHHHHHHHHHHHcCCeEEeCCC
Confidence 765443 33332 1 223345444 444545666667777777766776665553
No 159
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=97.61 E-value=0.00067 Score=64.84 Aligned_cols=123 Identities=9% Similarity=0.050 Sum_probs=75.0
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhc-CCCCCCeeeecCHHHHHhccccCCCccEEEEc
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCD-MEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g-~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDF 113 (257)
+|||+|+|+ |.||+.++..+.. .++++ .++|+.. ..+..+.. .....++..+.|++++++.+ .++|+||-.
T Consensus 2 ~m~IgvIG~-G~mG~~lA~~La~-~G~~V-~v~dr~~--~~~~~l~~~~~~g~gi~~~~~~~e~v~~l---~~aDvVila 73 (482)
T 2pgd_A 2 QADIALIGL-AVMGQNLILNMND-HGFVV-CAFNRTV--SKVDDFLANEAKGTKVLGAHSLEEMVSKL---KKPRRIILL 73 (482)
T ss_dssp CBSEEEECC-SHHHHHHHHHHHH-TTCCE-EEECSST--HHHHHHHHTTTTTSSCEECSSHHHHHHHB---CSSCEEEEC
T ss_pred CCeEEEECh-HHHHHHHHHHHHH-CCCeE-EEEeCCH--HHHHHHHhccccCCCeEEeCCHHHHHhhc---cCCCEEEEe
Confidence 479999995 9999999998875 56775 4667531 22222321 00004577788999887411 269999977
Q ss_pred CChH-hHHHHHHH---HHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCch
Q 025154 114 TDAS-TVYDNVKQ---ATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLS 166 (257)
Q Consensus 114 T~p~-~~~~~~~~---a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfS 166 (257)
..+. .+.+.+.. .++.|..+|..+++... +..++.+..++.|+.++-+|++.
T Consensus 74 Vp~~~~v~~vl~~l~~~l~~g~iII~~s~~~~~-~~~~l~~~l~~~g~~~v~~pv~g 129 (482)
T 2pgd_A 74 VKAGQAVDNFIEKLVPLLDIGDIIIDGGNSEYR-DTMRRCRDLKDKGILFVGSGVSG 129 (482)
T ss_dssp SCTTHHHHHHHHHHHHHCCTTCEEEECSCCCHH-HHHHHHHHHHHTTCEEEEEEEES
T ss_pred CCChHHHHHHHHHHHhhcCCCCEEEECCCCCHH-HHHHHHHHHHHcCCeEeCCCCCC
Confidence 6553 44444433 34456666666677644 33445555555567776666643
No 160
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=97.58 E-value=0.00057 Score=65.22 Aligned_cols=122 Identities=12% Similarity=0.093 Sum_probs=74.7
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
++||+|+|+ |.||+.+++.+.. .++++ .++|+.. ..+..+.......++..+.|++++++.+ .++|+||-..
T Consensus 5 ~~~IgvIG~-G~mG~~lA~~L~~-~G~~V-~v~dr~~--~~~~~l~~~~~~~gi~~~~s~~e~v~~l---~~aDvVilav 76 (474)
T 2iz1_A 5 QANFGVVGM-AVMGKNLALNVES-RGYTV-AIYNRTT--SKTEEVFKEHQDKNLVFTKTLEEFVGSL---EKPRRIMLMV 76 (474)
T ss_dssp TBSEEEECC-SHHHHHHHHHHHH-TTCCE-EEECSSH--HHHHHHHHHTTTSCEEECSSHHHHHHTB---CSSCEEEECC
T ss_pred CCcEEEEee-HHHHHHHHHHHHh-CCCEE-EEEcCCH--HHHHHHHHhCcCCCeEEeCCHHHHHhhc---cCCCEEEEEc
Confidence 479999995 9999999998875 56775 4666531 1122222100012677788999987510 1499999777
Q ss_pred Ch-HhHHHHHHH---HHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCc
Q 025154 115 DA-STVYDNVKQ---ATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTL 165 (257)
Q Consensus 115 ~p-~~~~~~~~~---a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNf 165 (257)
.+ ..+.+.+.. .++.|..+|..+++... ..+++.+..++.|+.++-+|++
T Consensus 77 p~~~~v~~vl~~l~~~l~~g~iiId~s~~~~~-~~~~l~~~l~~~g~~~v~~pv~ 130 (474)
T 2iz1_A 77 QAGAATDATIKSLLPLLDIGDILIDGGNTHFP-DTMRRNAELADSGINFIGTGVS 130 (474)
T ss_dssp CTTHHHHHHHHHHGGGCCTTCEEEECSCCCHH-HHHHHHHHTTTSSCEEEEEEEC
T ss_pred cCchHHHHHHHHHHhhCCCCCEEEECCCCCHH-HHHHHHHHHHHCCCeEECCCCC
Confidence 65 344444443 23456666666667643 3455666666667766656654
No 161
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=97.55 E-value=0.00088 Score=58.16 Aligned_cols=112 Identities=10% Similarity=0.070 Sum_probs=68.2
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeee----ecC---HHHHHhccccCCCcc
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV----MSD---LTMVLGSISQSKARA 108 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v----~~d---l~~~l~~~~~~~~~D 108 (257)
|||.|+|++|.+|+.+++.+.+.++.++++...+.. ....+. ..++.+ ..| +++++ .++|
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~---~~~~~~----~~~v~~~~~D~~d~~~l~~~~------~~~d 67 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVE---KVPDDW----RGKVSVRQLDYFNQESMVEAF------KGMD 67 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGG---GSCGGG----BTTBEEEECCTTCHHHHHHHT------TTCS
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHH---HHHHhh----hCCCEEEEcCCCCHHHHHHHH------hCCC
Confidence 689999999999999999987666888887765321 111111 123322 123 34455 3799
Q ss_pred EEEEcCCh--------HhHHHHHHHHHHcCCC-eE-EeCCC------CC-HHHHHHHHHHhhhcCceEE
Q 025154 109 VVIDFTDA--------STVYDNVKQATAFGMR-SV-VYVPH------IQ-LETVSALSAFCDKASMGCL 160 (257)
Q Consensus 109 VvIDFT~p--------~~~~~~~~~a~~~Gi~-vV-iGTTG------~s-~e~~~~L~~~a~~~gipvl 160 (257)
+||....+ ..+...+..|.+.|+. +| +.+.| +. ......+++..++.|+++.
T Consensus 68 ~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~~~~~~~~~~~~~~~~e~~~~~~g~~~~ 136 (289)
T 3e48_A 68 TVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYADQHNNPFHMSPYFGYASRLLSTSGIDYT 136 (289)
T ss_dssp EEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESCCSTTCCSTTHHHHHHHHHHHHHHCCEEE
T ss_pred EEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcccCCCCCCCCccchhHHHHHHHHHHcCCCEE
Confidence 99987642 4456677888888965 44 22222 11 1122356666666677654
No 162
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=97.55 E-value=6.9e-05 Score=67.76 Aligned_cols=122 Identities=11% Similarity=0.162 Sum_probs=72.3
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCC-------CCCCeeeecCHHHHHhccccCCC
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDME-------QPLEIPVMSDLTMVLGSISQSKA 106 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~-------~~~gv~v~~dl~~~l~~~~~~~~ 106 (257)
.++||+|+|+ |.||..++..+.+ .+.++. ++++. ...+..+...+ ...++.+++++++ ++ .
T Consensus 13 ~~~kI~iIG~-G~mG~ala~~L~~-~G~~V~-~~~r~--~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~------~ 80 (335)
T 1z82_A 13 MEMRFFVLGA-GSWGTVFAQMLHE-NGEEVI-LWARR--KEIVDLINVSHTSPYVEESKITVRATNDLEE-IK------K 80 (335)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHH-TTCEEE-EECSS--HHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CC------T
T ss_pred cCCcEEEECc-CHHHHHHHHHHHh-CCCeEE-EEeCC--HHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hc------C
Confidence 4689999995 9999999998874 467754 45542 11112221100 0013567788877 53 7
Q ss_pred ccEEEEcCChHhHHHHHHHHHHcCCCeEEeCCCCCHHHHHHHHHHhhh---cCceEEEccCchH
Q 025154 107 RAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDK---ASMGCLIAPTLSI 167 (257)
Q Consensus 107 ~DVvIDFT~p~~~~~~~~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~---~gipvl~spNfSl 167 (257)
+|+||-+..+..+.+.+......+..+|.-+.|++.++.+.+.+...+ ...+++..||+..
T Consensus 81 aDvVil~vk~~~~~~v~~~l~~~~~~vv~~~nGi~~~~~~~l~~~~~~~~~~~~~~~~~P~~~~ 144 (335)
T 1z82_A 81 EDILVIAIPVQYIREHLLRLPVKPSMVLNLSKGIEIKTGKRVSEIVEEILGCPYAVLSGPSHAE 144 (335)
T ss_dssp TEEEEECSCGGGHHHHHTTCSSCCSEEEECCCCCCTTTCCCHHHHHHHHTCCCEEEEESSCCHH
T ss_pred CCEEEEECCHHHHHHHHHHhCcCCCEEEEEeCCCCCCccCcHHHHHHHHcCCceEEEECCccHH
Confidence 999997777766666554322245556665657765433333333221 1357888999865
No 163
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=97.54 E-value=0.00031 Score=67.24 Aligned_cols=122 Identities=10% Similarity=0.056 Sum_probs=71.9
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcC-C---CCCCeeeecCHHHHHhccccCCCccEEE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDM-E---QPLEIPVMSDLTMVLGSISQSKARAVVI 111 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~-~---~~~gv~v~~dl~~~l~~~~~~~~~DVvI 111 (257)
|||+|+|+ |.||+.++..+.. .++++ .++|+.. ..+..+... + ...++..+.|++++++.+ .++|+||
T Consensus 2 MkIgVIG~-G~mG~~lA~~La~-~G~~V-~v~dr~~--~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l---~~aDvVi 73 (478)
T 1pgj_A 2 MDVGVVGL-GVMGANLALNIAE-KGFKV-AVFNRTY--SKSEEFMKANASAPFAGNLKAFETMEAFAASL---KKPRKAL 73 (478)
T ss_dssp BSEEEECC-SHHHHHHHHHHHH-TTCCE-EEECSSH--HHHHHHHHHTTTSTTGGGEEECSCHHHHHHHB---CSSCEEE
T ss_pred CEEEEECh-HHHHHHHHHHHHH-CCCEE-EEEeCCH--HHHHHHHHhcCCCCCCCCeEEECCHHHHHhcc---cCCCEEE
Confidence 69999995 9999999998875 56775 4666531 112222210 0 011266788998887511 1599999
Q ss_pred EcCChH-hHHHHHH---HHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCch
Q 025154 112 DFTDAS-TVYDNVK---QATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLS 166 (257)
Q Consensus 112 DFT~p~-~~~~~~~---~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfS 166 (257)
-...+. .+.+.+. ..++.|..+|..++|... ..+++.+..++.|+..+-+|+++
T Consensus 74 laVp~~~~v~~vl~~l~~~l~~g~iIId~sng~~~-~~~~l~~~l~~~g~~~v~~pv~g 131 (478)
T 1pgj_A 74 ILVQAGAATDSTIEQLKKVFEKGDILVDTGNAHFK-DQGRRAQQLEAAGLRFLGMGISG 131 (478)
T ss_dssp ECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCCHH-HHHHHHHHHHTTTCEEEEEEEES
T ss_pred EecCChHHHHHHHHHHHhhCCCCCEEEECCCCChH-HHHHHHHHHHHCCCeEEEeeccC
Confidence 776553 4444443 334456666666677643 33445555555566655555543
No 164
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=97.53 E-value=0.00058 Score=65.45 Aligned_cols=123 Identities=10% Similarity=0.053 Sum_probs=74.2
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEc
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDF 113 (257)
+++||+|+|+ |.||+.+++.+.+ .+++++ ++++.. ..+..+.......++..++|++++++.+ .++|+||-.
T Consensus 14 ~~~~IgvIGl-G~MG~~lA~~La~-~G~~V~-v~~r~~--~~~~~l~~~~~~~gi~~~~s~~e~v~~l---~~aDvVil~ 85 (480)
T 2zyd_A 14 SKQQIGVVGM-AVMGRNLALNIES-RGYTVS-IFNRSR--EKTEEVIAENPGKKLVPYYTVKEFVESL---ETPRRILLM 85 (480)
T ss_dssp -CBSEEEECC-SHHHHHHHHHHHT-TTCCEE-EECSSH--HHHHHHHHHSTTSCEEECSSHHHHHHTB---CSSCEEEEC
T ss_pred CCCeEEEEcc-HHHHHHHHHHHHh-CCCeEE-EEeCCH--HHHHHHHhhCCCCCeEEeCCHHHHHhCC---CCCCEEEEE
Confidence 3578999995 9999999998874 577764 566431 1122222100002677788999887510 139999877
Q ss_pred CCh-HhHHHHHHHHH---HcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCc
Q 025154 114 TDA-STVYDNVKQAT---AFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTL 165 (257)
Q Consensus 114 T~p-~~~~~~~~~a~---~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNf 165 (257)
..+ ..+.+.+.... +.|.-+|..++|... ..+++.+..++.|+.++-+|++
T Consensus 86 Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~~~-~t~~l~~~l~~~g~~~v~~pv~ 140 (480)
T 2zyd_A 86 VKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQ-DTIRRNRELSAEGFNFIGTGVS 140 (480)
T ss_dssp SCSSSHHHHHHHHHGGGCCTTCEEEECSCCCHH-HHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHhhcCCCCEEEECCCCCHH-HHHHHHHHHHHCCCCeeCCccc
Confidence 655 35555554433 345666667777643 3344555555556766655554
No 165
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=97.52 E-value=0.00089 Score=60.51 Aligned_cols=102 Identities=17% Similarity=0.138 Sum_probs=63.3
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCc--EEEEEEecCCCCcchhhhhcCCCCCCe--eeecCHHH-HHhccccCCCccE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGM--EVAGAIDSHSVGEDIGMVCDMEQPLEI--PVMSDLTM-VLGSISQSKARAV 109 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~--eLvg~vd~~~~g~d~g~~~g~~~~~gv--~v~~dl~~-~l~~~~~~~~~DV 109 (257)
++||+|+| .|.||+.+++.+.. .++ +++ ++|+.. ....... ..|+ ..++++++ ++. ++|+
T Consensus 33 ~~kI~IIG-~G~mG~slA~~l~~-~G~~~~V~-~~dr~~--~~~~~a~----~~G~~~~~~~~~~~~~~~------~aDv 97 (314)
T 3ggo_A 33 MQNVLIVG-VGFMGGSFAKSLRR-SGFKGKIY-GYDINP--ESISKAV----DLGIIDEGTTSIAKVEDF------SPDF 97 (314)
T ss_dssp CSEEEEES-CSHHHHHHHHHHHH-TTCCSEEE-EECSCH--HHHHHHH----HTTSCSEEESCTTGGGGG------CCSE
T ss_pred CCEEEEEe-eCHHHHHHHHHHHh-CCCCCEEE-EEECCH--HHHHHHH----HCCCcchhcCCHHHHhhc------cCCE
Confidence 37999999 59999999998875 456 655 466531 1112121 2344 35678887 664 7999
Q ss_pred EEEcCChHhHHHHHHHHHHc--CCCeEEeCCCCCHHHHHHHHHH
Q 025154 110 VIDFTDASTVYDNVKQATAF--GMRSVVYVPHIQLETVSALSAF 151 (257)
Q Consensus 110 vIDFT~p~~~~~~~~~a~~~--Gi~vViGTTG~s~e~~~~L~~~ 151 (257)
||....+....+.+...... .-.+|+-+++......+.+++.
T Consensus 98 Vilavp~~~~~~vl~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~ 141 (314)
T 3ggo_A 98 VMLSSPVRTFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENI 141 (314)
T ss_dssp EEECSCGGGHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHH
T ss_pred EEEeCCHHHHHHHHHHHhhccCCCcEEEECCCCcHHHHHHHHHh
Confidence 99888887777666555432 2235555555443334555544
No 166
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=97.49 E-value=9.7e-06 Score=71.64 Aligned_cols=93 Identities=9% Similarity=0.028 Sum_probs=51.6
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
||||+|+|+ |+||+.+++.+... ++++.++|+.. .....+.. ..++ .+.|++++++ ++|+||-.+
T Consensus 2 ~m~I~iIG~-G~mG~~la~~l~~~--~~v~~v~~~~~--~~~~~~~~---~~g~-~~~~~~~~~~------~~DvVilav 66 (276)
T 2i76_A 2 SLVLNFVGT-GTLTRFFLECLKDR--YEIGYILSRSI--DRARNLAE---VYGG-KAATLEKHPE------LNGVVFVIV 66 (276)
T ss_dssp --CCEEESC-CHHHHHHHHTTC------CCCEECSSH--HHHHHHHH---HTCC-CCCSSCCCCC---------CEEECS
T ss_pred CceEEEEeC-CHHHHHHHHHHHHc--CcEEEEEeCCH--HHHHHHHH---HcCC-ccCCHHHHHh------cCCEEEEeC
Confidence 579999995 99999999987654 67766777531 11222221 2344 5667766663 689999888
Q ss_pred ChHhHHHHHHHHHHcCCCeEEeCC-CCCHH
Q 025154 115 DASTVYDNVKQATAFGMRSVVYVP-HIQLE 143 (257)
Q Consensus 115 ~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e 143 (257)
.|....+.+......+. +|+-++ +++.+
T Consensus 67 ~~~~~~~v~~~l~~~~~-ivi~~s~~~~~~ 95 (276)
T 2i76_A 67 PDRYIKTVANHLNLGDA-VLVHCSGFLSSE 95 (276)
T ss_dssp CTTTHHHHHTTTCCSSC-CEEECCSSSCGG
T ss_pred ChHHHHHHHHHhccCCC-EEEECCCCCcHH
Confidence 77776666544332343 444444 55443
No 167
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=97.49 E-value=0.00027 Score=64.40 Aligned_cols=120 Identities=14% Similarity=0.228 Sum_probs=72.2
Q ss_pred eEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhh----------cCCCCCCeeeecCHHHHHhccccCCC
Q 025154 37 KVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVC----------DMEQPLEIPVMSDLTMVLGSISQSKA 106 (257)
Q Consensus 37 kV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~----------g~~~~~gv~v~~dl~~~l~~~~~~~~ 106 (257)
||+|+|+ |.||..++..+. ..++++. ++++.. ..+..+. +..-+.++.+++|+++++. +
T Consensus 17 kI~iIG~-G~mG~~la~~L~-~~G~~V~-~~~r~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 85 (366)
T 1evy_A 17 KAVVFGS-GAFGTALAMVLS-KKCREVC-VWHMNE--EEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYN------G 85 (366)
T ss_dssp EEEEECC-SHHHHHHHHHHT-TTEEEEE-EECSCH--HHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHT------T
T ss_pred eEEEECC-CHHHHHHHHHHH-hCCCEEE-EEECCH--HHHHHHHHcCcccccccccccccceeeeCCHHHHHc------C
Confidence 9999995 999999998876 4566654 455421 1111111 0000124666788888774 7
Q ss_pred ccEEEEcCChHhHHHHHHH-------HHHc-CCCeEEeCCCCCHHHHHHHHHHhhhc-C---ceEEEccCchH
Q 025154 107 RAVVIDFTDASTVYDNVKQ-------ATAF-GMRSVVYVPHIQLETVSALSAFCDKA-S---MGCLIAPTLSI 167 (257)
Q Consensus 107 ~DVvIDFT~p~~~~~~~~~-------a~~~-Gi~vViGTTG~s~e~~~~L~~~a~~~-g---ipvl~spNfSl 167 (257)
+|+||-...+....+.+.. .+.. +..+|.-+.|++.+..+.+.+..++. + .+++..||+.-
T Consensus 86 aDvVilav~~~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~~~~~~~~~~l~~~~~~~~~~v~~gp~~~~ 158 (366)
T 1evy_A 86 AEIILFVIPTQFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPSPLLSVLAGPSFAI 158 (366)
T ss_dssp CSSEEECCCHHHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCTTTCCCHHHHHTTTSCGGGEEEEESSCCHH
T ss_pred CCEEEECCChHHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCCccccCHHHHHHHHCCCCcEEEEeCCChHH
Confidence 9999977776555544433 3445 77777666587654332333332221 2 57888999875
No 168
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.48 E-value=0.0024 Score=52.13 Aligned_cols=132 Identities=13% Similarity=0.059 Sum_probs=75.3
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeee-e---cCHHHHHhccccCCCccEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-M---SDLTMVLGSISQSKARAVV 110 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v-~---~dl~~~l~~~~~~~~~DVv 110 (257)
..+|+|+|+ |+||+.+++.+.+..+.+++ ++|... .....+. ..|+.+ + .+.+. +.+...-.++|++
T Consensus 39 ~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~-vid~~~--~~~~~~~----~~g~~~~~gd~~~~~~-l~~~~~~~~ad~v 109 (183)
T 3c85_A 39 HAQVLILGM-GRIGTGAYDELRARYGKISL-GIEIRE--EAAQQHR----SEGRNVISGDATDPDF-WERILDTGHVKLV 109 (183)
T ss_dssp TCSEEEECC-SHHHHHHHHHHHHHHCSCEE-EEESCH--HHHHHHH----HTTCCEEECCTTCHHH-HHTBCSCCCCCEE
T ss_pred CCcEEEECC-CHHHHHHHHHHHhccCCeEE-EEECCH--HHHHHHH----HCCCCEEEcCCCCHHH-HHhccCCCCCCEE
Confidence 468999995 99999999988653267766 456431 1111221 123332 2 23332 2210000368999
Q ss_pred EEcCCh-HhHHHHHHHHHHcC-CCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCchHHHHHHHHHHHHhc
Q 025154 111 IDFTDA-STVYDNVKQATAFG-MRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISAS 180 (257)
Q Consensus 111 IDFT~p-~~~~~~~~~a~~~G-i~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfSlGvnll~~~a~~l~ 180 (257)
|..+.. +.....+..+.+.+ ...|+..+ -+.+..+.+ ++.|+..+++|....|-.+.+.+.+.+.
T Consensus 110 i~~~~~~~~~~~~~~~~~~~~~~~~ii~~~-~~~~~~~~l----~~~G~~~vi~p~~~~a~~l~~~~~~~~~ 176 (183)
T 3c85_A 110 LLAMPHHQGNQTALEQLQRRNYKGQIAAIA-EYPDQLEGL----LESGVDAAFNIYSEAGSGFARHVCKQLE 176 (183)
T ss_dssp EECCSSHHHHHHHHHHHHHTTCCSEEEEEE-SSHHHHHHH----HHHTCSEEEEHHHHHHHHHHHHHHHHHC
T ss_pred EEeCCChHHHHHHHHHHHHHCCCCEEEEEE-CCHHHHHHH----HHcCCCEEEchHHHHHHHHHHHHHHhcC
Confidence 987753 33344445555555 33333333 234444444 3457888999999888888887777764
No 169
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=97.47 E-value=0.00088 Score=55.95 Aligned_cols=86 Identities=19% Similarity=0.259 Sum_probs=53.0
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeee-------ecCHHHHHhccccCCC
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-------MSDLTMVLGSISQSKA 106 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v-------~~dl~~~l~~~~~~~~ 106 (257)
.|+||.|+|++|.+|+.+++.+.+ .+.++++...+.. ....+ ..++.+ .++++++++ +
T Consensus 3 ~m~~ilItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~---~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~------~ 67 (227)
T 3dhn_A 3 KVKKIVLIGASGFVGSALLNEALN-RGFEVTAVVRHPE---KIKIE-----NEHLKVKKADVSSLDEVCEVCK------G 67 (227)
T ss_dssp CCCEEEEETCCHHHHHHHHHHHHT-TTCEEEEECSCGG---GCCCC-----CTTEEEECCCTTCHHHHHHHHT------T
T ss_pred CCCEEEEEcCCchHHHHHHHHHHH-CCCEEEEEEcCcc---cchhc-----cCceEEEEecCCCHHHHHHHhc------C
Confidence 478999999999999999998875 4688876543211 00000 012221 223445553 7
Q ss_pred ccEEEEcCCh------------HhHHHHHHHHHHcCC-CeE
Q 025154 107 RAVVIDFTDA------------STVYDNVKQATAFGM-RSV 134 (257)
Q Consensus 107 ~DVvIDFT~p------------~~~~~~~~~a~~~Gi-~vV 134 (257)
+|+||....+ ......++.|.+.|+ .+|
T Consensus 68 ~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v 108 (227)
T 3dhn_A 68 ADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFL 108 (227)
T ss_dssp CSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEE
T ss_pred CCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEE
Confidence 9999987543 234556677777775 344
No 170
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=97.43 E-value=0.0013 Score=57.56 Aligned_cols=103 Identities=17% Similarity=0.160 Sum_probs=61.0
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCc--EEEEEEecCCCCcchhhhhcCCCCCCee--eecCHHHHHhccccCCCccEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGM--EVAGAIDSHSVGEDIGMVCDMEQPLEIP--VMSDLTMVLGSISQSKARAVV 110 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~--eLvg~vd~~~~g~d~g~~~g~~~~~gv~--v~~dl~~~l~~~~~~~~~DVv 110 (257)
|+||+|+| .|.||+.+++.+.. .++ +++ ++|+.. .....+. ..|+. .++|+++++. .++|+|
T Consensus 1 m~~I~iIG-~G~mG~~~a~~l~~-~g~~~~V~-~~d~~~--~~~~~~~----~~g~~~~~~~~~~~~~~-----~~aDvV 66 (281)
T 2g5c_A 1 MQNVLIVG-VGFMGGSFAKSLRR-SGFKGKIY-GYDINP--ESISKAV----DLGIIDEGTTSIAKVED-----FSPDFV 66 (281)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHH-TTCCSEEE-EECSCH--HHHHHHH----HTTSCSEEESCGGGGGG-----TCCSEE
T ss_pred CcEEEEEe-cCHHHHHHHHHHHh-cCCCcEEE-EEeCCH--HHHHHHH----HCCCcccccCCHHHHhc-----CCCCEE
Confidence 57999999 59999999998875 455 654 466531 1111111 22332 3567777663 168999
Q ss_pred EEcCChHhHHHHHHHHH---HcCCCeEEeCCCCCHHHHHHHHHHh
Q 025154 111 IDFTDASTVYDNVKQAT---AFGMRSVVYVPHIQLETVSALSAFC 152 (257)
Q Consensus 111 IDFT~p~~~~~~~~~a~---~~Gi~vViGTTG~s~e~~~~L~~~a 152 (257)
|..+.|....+.+.... +.+. +|+-+++......+.+.+..
T Consensus 67 ilavp~~~~~~v~~~l~~~l~~~~-iv~~~~~~~~~~~~~l~~~l 110 (281)
T 2g5c_A 67 MLSSPVRTFREIAKKLSYILSEDA-TVTDQGSVKGKLVYDLENIL 110 (281)
T ss_dssp EECSCHHHHHHHHHHHHHHSCTTC-EEEECCSCCTHHHHHHHHHH
T ss_pred EEcCCHHHHHHHHHHHHhhCCCCc-EEEECCCCcHHHHHHHHHhc
Confidence 98888887776665443 3344 44433333333334455443
No 171
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=97.40 E-value=0.0001 Score=67.78 Aligned_cols=141 Identities=17% Similarity=0.221 Sum_probs=75.5
Q ss_pred eeeccccccccccCccccccCCCCCCCceEEEEcCCChHHHHHHHHHHhcCC-------cEEEEEEecCCC--Cc-chhh
Q 025154 9 HCRMHHISQNVKAKRFISCSTNPPQSNIKVIINGAVKEIGRAAVIAVTKARG-------MEVAGAIDSHSV--GE-DIGM 78 (257)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~-------~eLvg~vd~~~~--g~-d~g~ 78 (257)
|-.-||.-.|+--.+ +..|+||+|+|+ |.||..++..+.+. + .++. ++++... ++ .+..
T Consensus 3 ~~~~~~~~~~~~~~~--------~~~~~kI~iIGa-G~mG~alA~~L~~~-G~~~~~~~~~V~-~~~r~~~~~~~~~~~~ 71 (375)
T 1yj8_A 3 HHHHHHMYRNLFDKL--------KDGPLKISILGS-GNWASAISKVVGTN-AKNNYLFENEVR-MWIRDEFVNGERMVDI 71 (375)
T ss_dssp -------CCSHHHHH--------HHSCBCEEEECC-SHHHHHHHHHHHHH-HHHCTTBCSCEE-EECCSCC---CCHHHH
T ss_pred cchhHHHHHHHHhcC--------ccCCCEEEEECc-CHHHHHHHHHHHHc-CCccCCCCCeEE-EEECChhhhhHHHHHH
Confidence 334567666653211 123679999995 99999999988753 3 5544 4554311 00 1111
Q ss_pred hh----------cCCCCCCeeeecCHHHHHhccccCCCccEEEEcCChHhHHHHHHHHHH-------cCCCeEEeCCCCC
Q 025154 79 VC----------DMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATA-------FGMRSVVYVPHIQ 141 (257)
Q Consensus 79 ~~----------g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT~p~~~~~~~~~a~~-------~Gi~vViGTTG~s 141 (257)
+. +..-+.++.+++|+++++. ++|+||-+..+....+.+..... .+..+|.-+.|++
T Consensus 72 l~~~~~~~~~~~~~~~~~~i~~~~~~~ea~~------~aDvVilav~~~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~ 145 (375)
T 1yj8_A 72 INNKHENTKYLKGVPLPHNIVAHSDLASVIN------DADLLIFIVPCQYLESVLASIKESESIKIASHAKAISLTKGFI 145 (375)
T ss_dssp HHHHCBCTTTSTTCBCCTTEEEESSTHHHHT------TCSEEEECCCHHHHHHHHHHHTC---CCCCTTCEEEECCCSCE
T ss_pred HHhcCcccccCCcccCcCCeEEECCHHHHHc------CCCEEEEcCCHHHHHHHHHHHhhhhhccCCCCCEEEEeCCccc
Confidence 11 1000124667788888774 79999977776665555554332 2444555555876
Q ss_pred HH-----HH-HHHHHHhhhcCceEEEccCchH
Q 025154 142 LE-----TV-SALSAFCDKASMGCLIAPTLSI 167 (257)
Q Consensus 142 ~e-----~~-~~L~~~a~~~gipvl~spNfSl 167 (257)
.+ .. +.+.+..- ...+++..||++-
T Consensus 146 ~~~~~~~~l~~~l~~~~~-~~~~v~~gp~~a~ 176 (375)
T 1yj8_A 146 VKKNQMKLCSNYISDFLN-IPCSALSGANIAM 176 (375)
T ss_dssp EETTEEECHHHHHHHHSS-SCEEEEECSCCHH
T ss_pred cCCccccCHHHHHHHHcC-CCEEEEeCCchHH
Confidence 41 11 22333211 2367888999875
No 172
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=97.40 E-value=0.00066 Score=60.38 Aligned_cols=32 Identities=19% Similarity=0.259 Sum_probs=26.0
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEec
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~ 69 (257)
|.||+|+|+ |.||..++..+.. .+++++ ++|+
T Consensus 15 ~~~I~VIG~-G~mG~~iA~~la~-~G~~V~-~~d~ 46 (302)
T 1f0y_A 15 VKHVTVIGG-GLMGAGIAQVAAA-TGHTVV-LVDQ 46 (302)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHH-TTCEEE-EECS
T ss_pred CCEEEEECC-CHHHHHHHHHHHh-CCCeEE-EEEC
Confidence 568999996 9999999998774 578865 5664
No 173
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=97.38 E-value=0.0015 Score=56.87 Aligned_cols=99 Identities=13% Similarity=0.188 Sum_probs=62.8
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCe--eeecCHHHHHhccccCCCccEEEEc
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEI--PVMSDLTMVLGSISQSKARAVVIDF 113 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv--~v~~dl~~~l~~~~~~~~~DVvIDF 113 (257)
|||+|+|+ |.||+.+++.+.. .+++++. +|+.. .....+. +.|+ .++++++++ . ++|+||..
T Consensus 1 m~i~iiG~-G~~G~~~a~~l~~-~g~~V~~-~~~~~--~~~~~~~----~~g~~~~~~~~~~~~-~------~~D~vi~a 64 (279)
T 2f1k_A 1 MKIGVVGL-GLIGASLAGDLRR-RGHYLIG-VSRQQ--STCEKAV----ERQLVDEAGQDLSLL-Q------TAKIIFLC 64 (279)
T ss_dssp CEEEEECC-SHHHHHHHHHHHH-TTCEEEE-ECSCH--HHHHHHH----HTTSCSEEESCGGGG-T------TCSEEEEC
T ss_pred CEEEEEcC-cHHHHHHHHHHHH-CCCEEEE-EECCH--HHHHHHH----hCCCCccccCCHHHh-C------CCCEEEEE
Confidence 58999995 9999999998875 4677654 56431 1122221 2233 246777777 5 79999988
Q ss_pred CChHhHHHHHHHHHH---cCCCeEEeCCCCCHHHHHHHHHH
Q 025154 114 TDASTVYDNVKQATA---FGMRSVVYVPHIQLETVSALSAF 151 (257)
Q Consensus 114 T~p~~~~~~~~~a~~---~Gi~vViGTTG~s~e~~~~L~~~ 151 (257)
+.|....+.+..... .+. +|+-+.+.+....+.+.+.
T Consensus 65 v~~~~~~~~~~~l~~~~~~~~-~vv~~~~~~~~~~~~~~~~ 104 (279)
T 2f1k_A 65 TPIQLILPTLEKLIPHLSPTA-IVTDVASVKTAIAEPASQL 104 (279)
T ss_dssp SCHHHHHHHHHHHGGGSCTTC-EEEECCSCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCCCCC-EEEECCCCcHHHHHHHHHH
Confidence 888777776665433 243 4555566666555555443
No 174
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=97.37 E-value=0.00018 Score=66.33 Aligned_cols=97 Identities=22% Similarity=0.200 Sum_probs=60.9
Q ss_pred CceEEEEcCCChHHHHHHHHHHhc---CCcEEEEEEecC-------------CCCcchhhhh--cC---CCCCCeeee--
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKA---RGMEVAGAIDSH-------------SVGEDIGMVC--DM---EQPLEIPVM-- 91 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~---~~~eLvg~vd~~-------------~~g~d~g~~~--g~---~~~~gv~v~-- 91 (257)
|+||||+|+ ||+||.+.+++.++ +++++|++-|.. ..|+--+++. +. .....+.++
T Consensus 1 ~ikVaInGf-GrIGr~v~r~l~~~~~~~~~evvaInd~~~~~~~a~ll~ydS~hg~f~~~v~~~~~~l~v~g~~i~v~~~ 79 (335)
T 1obf_O 1 TIRVAINGY-GRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDAN 79 (335)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECC
T ss_pred CcEEEEECC-CHHHHHHHHHHHhcCCCCCcEEEEEeCCCCHHHHHHHhccCCcCCCCCCCEEEeCCEEEECCEEEEEEEc
Confidence 579999996 99999999998887 899999998731 0111000000 00 000123444
Q ss_pred cCHHHHHhccccCCCccEEEEcCChHhHHHHHHHHHHcCCC-eEE
Q 025154 92 SDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVV 135 (257)
Q Consensus 92 ~dl~~~l~~~~~~~~~DVvIDFT~p~~~~~~~~~a~~~Gi~-vVi 135 (257)
.|++++-= .+.++|+|++.|-.....+.+..+++.|.. +|+
T Consensus 80 ~dp~~~~w---~~~gvDiV~estG~f~s~e~a~~h~~aGakkVvi 121 (335)
T 1obf_O 80 RNPAQLPW---GALKVDVVLECTGFFTTKEKAGAHIKGGAKKVII 121 (335)
T ss_dssp SCGGGSCT---TTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEE
T ss_pred CCcccCCc---cccCCCEEEEccCccccHHHHHHHHHcCCCEEEE
Confidence 24444310 013799999887666777888888888876 444
No 175
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=97.37 E-value=0.00083 Score=63.03 Aligned_cols=137 Identities=12% Similarity=0.100 Sum_probs=73.9
Q ss_pred ccccCCCCCCCceEEEEcCCChHHHHHHHHHHhcCC-c-----EEEEEEecC--CCCcchhh-----------hhcCCCC
Q 025154 25 ISCSTNPPQSNIKVIINGAVKEIGRAAVIAVTKARG-M-----EVAGAIDSH--SVGEDIGM-----------VCDMEQP 85 (257)
Q Consensus 25 ~~~~~~~~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~-~-----eLvg~vd~~--~~g~d~g~-----------~~g~~~~ 85 (257)
.+++....+.|+||+|+|+ |.+|.+++..+.+... + .-|-.+.+. ..++...+ +-+..-+
T Consensus 24 ~~~~~~~~~~p~KI~ViGa-GsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp 102 (391)
T 4fgw_A 24 SSVSLKAAEKPFKVTVIGS-GNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLP 102 (391)
T ss_dssp ---------CCEEEEEECC-SHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCC
T ss_pred ccccccccCCCCeEEEECc-CHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCC
Confidence 3444555667899999996 9999999998875321 0 112223221 11111111 1122123
Q ss_pred CCeeeecCHHHHHhccccCCCccEEEEcCChHhHHHHHHHH---HHcCCCeEEeCCCCCHHH------HHHHHHHhhhcC
Q 025154 86 LEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQA---TAFGMRSVVYVPHIQLET------VSALSAFCDKAS 156 (257)
Q Consensus 86 ~gv~v~~dl~~~l~~~~~~~~~DVvIDFT~p~~~~~~~~~a---~~~Gi~vViGTTG~s~e~------~~~L~~~a~~~g 156 (257)
.++.+++|++++++ ++|++|-..+.....+.++.. +..+.++|..+=|+.... -+.+.+.-. ..
T Consensus 103 ~~i~~t~dl~~al~------~ad~ii~avPs~~~r~~l~~l~~~~~~~~~iv~~~KGie~~~~~~~~~se~i~e~~~-~~ 175 (391)
T 4fgw_A 103 DNLVANPDLIDSVK------DVDIIVFNIPHQFLPRICSQLKGHVDSHVRAISCLKGFEVGAKGVQLLSSYITEELG-IQ 175 (391)
T ss_dssp SSEEEESCHHHHHT------TCSEEEECSCGGGHHHHHHHHTTTSCTTCEEEECCCSCEEETTEEECHHHHHHHHHC-CE
T ss_pred CCcEEeCCHHHHHh------cCCEEEEECChhhhHHHHHHhccccCCCceeEEeccccccccccchhHHHHHHHHhC-cc
Confidence 46778999999995 799988444444444444443 345677888777874211 122333211 12
Q ss_pred ceEEEccCchHHH
Q 025154 157 MGCLIAPTLSIGS 169 (257)
Q Consensus 157 ipvl~spNfSlGv 169 (257)
+.++-.|||+--|
T Consensus 176 ~~vLsGPs~A~EV 188 (391)
T 4fgw_A 176 CGALSGANIATEV 188 (391)
T ss_dssp EEEEECSCCHHHH
T ss_pred ceeccCCchHHHh
Confidence 6678889998766
No 176
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=97.34 E-value=0.00027 Score=64.66 Aligned_cols=90 Identities=18% Similarity=0.123 Sum_probs=58.4
Q ss_pred ceEEEEcCCChHHHHHHHHHH--hcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeec-CHHHHHhccccCCCccEEEE
Q 025154 36 IKVIINGAVKEIGRAAVIAVT--KARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMS-DLTMVLGSISQSKARAVVID 112 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~--~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~-dl~~~l~~~~~~~~~DVvID 112 (257)
|||+|+||+|++|+.+++.+. ..|..+++........|+... +.+ ..+.+++ +.++ + ++|+|++
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~~~g~~l~-~~g----~~i~v~~~~~~~-~-------~~DvV~~ 67 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYASPRSAGVRLA-FRG----EEIPVEPLPEGP-L-------PVDLVLA 67 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECGGGSSCEEE-ETT----EEEEEEECCSSC-C-------CCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeeccccCCCEEE-EcC----ceEEEEeCChhh-c-------CCCEEEE
Confidence 689999999999999999988 556666654333222232221 110 1233322 2111 1 4899997
Q ss_pred cCChHhHHHHHHHHHHcCCCeEEeCC
Q 025154 113 FTDASTVYDNVKQATAFGMRSVVYVP 138 (257)
Q Consensus 113 FT~p~~~~~~~~~a~~~Gi~vViGTT 138 (257)
.+......+.+..+++.|..+|.-+.
T Consensus 68 a~g~~~s~~~a~~~~~~G~~vId~s~ 93 (331)
T 2yv3_A 68 SAGGGISRAKALVWAEGGALVVDNSS 93 (331)
T ss_dssp CSHHHHHHHHHHHHHHTTCEEEECSS
T ss_pred CCCccchHHHHHHHHHCCCEEEECCC
Confidence 77777888999999999987765443
No 177
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=97.32 E-value=0.0031 Score=59.78 Aligned_cols=116 Identities=16% Similarity=0.206 Sum_probs=70.0
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCC--------------CCCCeeeecCHHHHHh
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDME--------------QPLEIPVMSDLTMVLG 99 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~--------------~~~gv~v~~dl~~~l~ 99 (257)
.+|||+|+| +|.||..++..+++ ++++++ +|... ..+..+.... ...++.+++|+++++.
T Consensus 35 ~~mkIaVIG-lG~mG~~lA~~La~--G~~V~~-~D~~~--~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~ 108 (432)
T 3pid_A 35 EFMKITISG-TGYVGLSNGVLIAQ--NHEVVA-LDIVQ--AKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYR 108 (432)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHT--TSEEEE-ECSCH--HHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHT
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHc--CCeEEE-EecCH--HHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHh
Confidence 368999999 59999999987764 888775 66421 1111111000 0125677889988885
Q ss_pred ccccCCCccEEEEcCChH-----------hHH---HHHHHHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCc
Q 025154 100 SISQSKARAVVIDFTDAS-----------TVY---DNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTL 165 (257)
Q Consensus 100 ~~~~~~~~DVvIDFT~p~-----------~~~---~~~~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNf 165 (257)
++|++|..+... .+. +.+.. ++.|.-+|..+| ..+...+++.+...+ ..++++|-|
T Consensus 109 ------~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~ST-v~pgtt~~l~~~l~~--~~v~~sPe~ 178 (432)
T 3pid_A 109 ------NADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKST-IPVGFTRDIKERLGI--DNVIFSPEF 178 (432)
T ss_dssp ------TCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSC-CCTTHHHHHHHHHTC--CCEEECCCC
T ss_pred ------CCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCC-CChHHHHHHHHHHhh--ccEeecCcc
Confidence 799988775322 222 22333 555655555444 333344455555555 467889987
No 178
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=97.32 E-value=0.0011 Score=59.78 Aligned_cols=123 Identities=12% Similarity=0.119 Sum_probs=71.5
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCC-------cEEEEEEecCCC--Cc-chhhhh----------cCCCCCCeeeecCH
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARG-------MEVAGAIDSHSV--GE-DIGMVC----------DMEQPLEIPVMSDL 94 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~-------~eLvg~vd~~~~--g~-d~g~~~----------g~~~~~gv~v~~dl 94 (257)
+|||+|+|+ |.||..++..+.+. + .++ -++++... ++ ....+. +..-+.++.+++|+
T Consensus 8 ~mkI~iIG~-G~mG~~~a~~l~~~-g~~~~~~~~~V-~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (354)
T 1x0v_A 8 SKKVCIVGS-GNWGSAIAKIVGGN-AAQLAQFDPRV-TMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDV 84 (354)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHH-HHHCTTEEEEE-EEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSH
T ss_pred CCeEEEECC-CHHHHHHHHHHHhc-CCcccCCCCeE-EEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCH
Confidence 379999995 99999999988753 3 554 45554311 00 111111 00001245667888
Q ss_pred HHHHhccccCCCccEEEEcCChHhHHHHHHHHHH---cCCCeEEeCCCCCH-----HHH-HHHHHHhhhcCceEEEccCc
Q 025154 95 TMVLGSISQSKARAVVIDFTDASTVYDNVKQATA---FGMRSVVYVPHIQL-----ETV-SALSAFCDKASMGCLIAPTL 165 (257)
Q Consensus 95 ~~~l~~~~~~~~~DVvIDFT~p~~~~~~~~~a~~---~Gi~vViGTTG~s~-----e~~-~~L~~~a~~~gipvl~spNf 165 (257)
++++. ++|+||-...+....+.+..... .+..+|.-++|++. +.. +.+.+..- ...+++..||+
T Consensus 85 ~~~~~------~aD~Vilav~~~~~~~v~~~i~~~l~~~~ivv~~~~Gi~~~~~~~~~l~~~l~~~~~-~~~~v~~gp~~ 157 (354)
T 1x0v_A 85 VQAAE------DADILIFVVPHQFIGKICDQLKGHLKANATGISLIKGVDEGPNGLKLISEVIGERLG-IPMSVLMGANI 157 (354)
T ss_dssp HHHHT------TCSEEEECCCGGGHHHHHHHHTTCSCTTCEEEECCCCBCSSSSSCCBHHHHHHHHHT-CCEEEEECSCC
T ss_pred HHHHc------CCCEEEEeCCHHHHHHHHHHHHhhCCCCCEEEEECCccCCCCCccccHHHHHHHHcC-CCEEEEECCCc
Confidence 88774 79999977777666665554332 35556666667752 111 22333211 12678889998
Q ss_pred hH
Q 025154 166 SI 167 (257)
Q Consensus 166 Sl 167 (257)
+-
T Consensus 158 a~ 159 (354)
T 1x0v_A 158 AS 159 (354)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 179
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=97.32 E-value=0.0021 Score=61.03 Aligned_cols=120 Identities=10% Similarity=0.137 Sum_probs=69.5
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhh-cCC---------------CCCCeeeecCHHHHHh
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVC-DME---------------QPLEIPVMSDLTMVLG 99 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~-g~~---------------~~~gv~v~~dl~~~l~ 99 (257)
|||+|+|+ |.||..++..+++ .+++++ ++|... ..+..+. +.. ....+.+++|+++++.
T Consensus 3 mkI~VIG~-G~vG~~lA~~La~-~G~~V~-~~D~~~--~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~ 77 (450)
T 3gg2_A 3 LDIAVVGI-GYVGLVSATCFAE-LGANVR-CIDTDR--NKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVP 77 (450)
T ss_dssp CEEEEECC-SHHHHHHHHHHHH-TTCEEE-EECSCH--HHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGG
T ss_pred CEEEEECc-CHHHHHHHHHHHh-cCCEEE-EEECCH--HHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHh
Confidence 79999995 9999999998874 578877 566431 0111111 000 0124667889998875
Q ss_pred ccccCCCccEEEEcCChH----------hHHHHH---HHHHHcCCCeEEeCCCCCHHHHHHHHHHhhh--------cCce
Q 025154 100 SISQSKARAVVIDFTDAS----------TVYDNV---KQATAFGMRSVVYVPHIQLETVSALSAFCDK--------ASMG 158 (257)
Q Consensus 100 ~~~~~~~~DVvIDFT~p~----------~~~~~~---~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~--------~gip 158 (257)
++|++|-...+. .+.+.+ ...++.|.-+|..+| ..+...+++.+..++ ...+
T Consensus 78 ------~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~ST-v~pgt~~~l~~~l~~~~~~~~~~~d~~ 150 (450)
T 3gg2_A 78 ------EADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKST-VPVGSYRLIRKAIQEELDKREVLIDFD 150 (450)
T ss_dssp ------GCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSC-CCTTHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred ------cCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeee-CCCcchHHHHHHHHHhccccCcCccee
Confidence 699988765322 333333 333445666666555 322222233222221 2378
Q ss_pred EEEccCchH
Q 025154 159 CLIAPTLSI 167 (257)
Q Consensus 159 vl~spNfSl 167 (257)
++++|.|.-
T Consensus 151 v~~~Pe~a~ 159 (450)
T 3gg2_A 151 IASNPEFLK 159 (450)
T ss_dssp EEECCCCCC
T ss_pred EEechhhhc
Confidence 999998764
No 180
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=97.31 E-value=0.0026 Score=60.54 Aligned_cols=123 Identities=12% Similarity=0.152 Sum_probs=72.3
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCC----------------CCCCeeeecCHHHH
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDME----------------QPLEIPVMSDLTMV 97 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~----------------~~~gv~v~~dl~~~ 97 (257)
+.+||+|+| +|.||..++..+++ .++++++ +|... ..+..+.... .+..+.+++|++++
T Consensus 7 ~~~~~~vIG-lG~vG~~~A~~La~-~G~~V~~-~D~~~--~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea 81 (446)
T 4a7p_A 7 GSVRIAMIG-TGYVGLVSGACFSD-FGHEVVC-VDKDA--RKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEG 81 (446)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHH-TTCEEEE-ECSCS--TTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHH
T ss_pred CceEEEEEc-CCHHHHHHHHHHHH-CCCEEEE-EeCCH--HHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHH
Confidence 357999999 59999999988774 5788775 56431 1112221100 01236678899888
Q ss_pred HhccccCCCccEEEEc--CChH---------hHHHHHHHH---HHcCCCeEEeCCCCCHHHHHHHHHHhhh----cCceE
Q 025154 98 LGSISQSKARAVVIDF--TDAS---------TVYDNVKQA---TAFGMRSVVYVPHIQLETVSALSAFCDK----ASMGC 159 (257)
Q Consensus 98 l~~~~~~~~~DVvIDF--T~p~---------~~~~~~~~a---~~~Gi~vViGTTG~s~e~~~~L~~~a~~----~gipv 159 (257)
++ ++|++|-. |.++ .+.+.++.. ++.|.-+|..+| ..+...+++.+..++ ...++
T Consensus 82 ~~------~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~ST-v~pgtt~~l~~~l~e~~~~~d~~v 154 (446)
T 4a7p_A 82 VK------DADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKST-VPVGTGDEVERIIAEVAPNSGAKV 154 (446)
T ss_dssp HT------TCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSC-CCTTHHHHHHHHHHHHSTTSCCEE
T ss_pred Hh------cCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCC-CCchHHHHHHHHHHHhCCCCCceE
Confidence 85 79998876 3322 244433333 345555555444 443333344333332 34899
Q ss_pred EEccCchHH
Q 025154 160 LIAPTLSIG 168 (257)
Q Consensus 160 l~spNfSlG 168 (257)
+.+|.|.-=
T Consensus 155 ~~~Pe~a~e 163 (446)
T 4a7p_A 155 VSNPEFLRE 163 (446)
T ss_dssp EECCCCCCT
T ss_pred EeCcccccc
Confidence 999998643
No 181
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=97.30 E-value=0.00017 Score=66.64 Aligned_cols=97 Identities=27% Similarity=0.243 Sum_probs=60.7
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecC-------------CCCcchhhhhcCCC-----CCCeeeec--CH
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH-------------SVGEDIGMVCDMEQ-----PLEIPVMS--DL 94 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~-------------~~g~d~g~~~g~~~-----~~gv~v~~--dl 94 (257)
++||+|+|+ ||+||.+.+++.+++++++|++-|.. ..|+--+++.-.+. ...+.++. |+
T Consensus 2 ~ikV~InGf-GrIGr~v~r~l~~~~~~evvaInd~~~~~~~a~ll~yDs~hG~~~~~v~~~~~~l~v~Gk~i~v~~~~dp 80 (342)
T 2ep7_A 2 AIKVGINGF-GRIGRSFFRASWGREEIEIVAINDLTDAKHLAHLLKYDSVHGIFKGSVEAKDDSIVVDGKEIKVFAQKDP 80 (342)
T ss_dssp -CEEEEECC-SHHHHHHHHHHTTCTTCEEEEEECSSCHHHHHHHHHEETTTEECSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred ceEEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCChHHHhhhhhcccccccCCCcEEEcCCEEEECCEEEEEEEcCCh
Confidence 379999996 99999999998888899999997731 11211011000000 01234443 44
Q ss_pred HHHH-hccccCCCccEEEEcCChHhHHHHHHHHHHcCCC-eEEe
Q 025154 95 TMVL-GSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVVY 136 (257)
Q Consensus 95 ~~~l-~~~~~~~~~DVvIDFT~p~~~~~~~~~a~~~Gi~-vViG 136 (257)
+++- .+ .++|+|++.|-.....+.+..+++.|.. ||+-
T Consensus 81 ~~~~w~~----~gvDiV~estG~~~s~e~a~~hl~aGakkVvis 120 (342)
T 2ep7_A 81 SQIPWGD----LGVDVVIEATGVFRDRENASKHLQGGAKKVIIT 120 (342)
T ss_dssp GGCCHHH----HTCSEEEECSSSCCBHHHHTTTGGGTCSEEEES
T ss_pred hhCCccc----cCCCEEEECCCchhhhhhhHHHHhcCCCEEEec
Confidence 3321 10 2689999888777778888888898875 3443
No 182
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=97.26 E-value=0.00051 Score=59.34 Aligned_cols=112 Identities=13% Similarity=0.167 Sum_probs=64.8
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCC-cEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARG-MEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~-~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
|||+|+|+ |.||+.+++.+... + .++ .++|+.. .....+. ..+|+.+++++++++ ++|+||-.+
T Consensus 1 m~i~iiG~-G~mG~~~a~~l~~~-g~~~v-~~~~r~~--~~~~~~~---~~~g~~~~~~~~~~~-------~~D~vi~~v 65 (263)
T 1yqg_A 1 MNVYFLGG-GNMAAAVAGGLVKQ-GGYRI-YIANRGA--EKRERLE---KELGVETSATLPELH-------SDDVLILAV 65 (263)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHH-CSCEE-EEECSSH--HHHHHHH---HHTCCEEESSCCCCC-------TTSEEEECS
T ss_pred CEEEEECc-hHHHHHHHHHHHHC-CCCeE-EEECCCH--HHHHHHH---HhcCCEEeCCHHHHh-------cCCEEEEEe
Confidence 58999995 99999999988754 4 554 4566531 1122222 123666666665544 489999888
Q ss_pred ChHhHHHHHHHHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEE-EccCch
Q 025154 115 DASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCL-IAPTLS 166 (257)
Q Consensus 115 ~p~~~~~~~~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl-~spNfS 166 (257)
.|....+.+......+..+|.-+.|++.+ .|++...+ +..++ .-||..
T Consensus 66 ~~~~~~~v~~~l~~~~~ivv~~~~g~~~~---~l~~~~~~-~~~~v~~~~~~~ 114 (263)
T 1yqg_A 66 KPQDMEAACKNIRTNGALVLSVAAGLSVG---TLSRYLGG-TRRIVRVMPNTP 114 (263)
T ss_dssp CHHHHHHHHTTCCCTTCEEEECCTTCCHH---HHHHHTTS-CCCEEEEECCGG
T ss_pred CchhHHHHHHHhccCCCEEEEecCCCCHH---HHHHHcCC-CCcEEEEcCCHH
Confidence 77666555543221244444434688863 45555443 23333 235643
No 183
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=97.24 E-value=0.0034 Score=60.41 Aligned_cols=119 Identities=11% Similarity=0.043 Sum_probs=72.6
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhc-CCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCD-MEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g-~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
.||+|+| .|.||+.++..+.. .+++++ ++|+.. ..+..+.. .....++..+.|++++++.+ .++|+||-..
T Consensus 11 ~~IgvIG-lG~MG~~lA~~La~-~G~~V~-v~dr~~--~~~~~l~~~~~~~~gi~~~~s~~e~v~~l---~~aDvVil~V 82 (497)
T 2p4q_A 11 ADFGLIG-LAVMGQNLILNAAD-HGFTVC-AYNRTQ--SKVDHFLANEAKGKSIIGATSIEDFISKL---KRPRKVMLLV 82 (497)
T ss_dssp CSEEEEC-CSHHHHHHHHHHHH-TTCCEE-EECSSS--HHHHHHHHTTTTTSSEECCSSHHHHHHTS---CSSCEEEECC
T ss_pred CCEEEEe-eHHHHHHHHHHHHH-CCCEEE-EEeCCH--HHHHHHHcccccCCCeEEeCCHHHHHhcC---CCCCEEEEEc
Confidence 3899999 59999999998875 577764 566531 22223321 10004677788999987511 1399998776
Q ss_pred Ch-HhHHHHHHHHH---HcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEcc
Q 025154 115 DA-STVYDNVKQAT---AFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAP 163 (257)
Q Consensus 115 ~p-~~~~~~~~~a~---~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~sp 163 (257)
.+ ..+.+.+.... +.|.-+|.++|+... ..+++.+..++.|+.++-+|
T Consensus 83 p~~~~v~~vl~~l~~~l~~g~iIId~s~~~~~-~~~~l~~~l~~~g~~~v~~p 134 (497)
T 2p4q_A 83 KAGAPVDALINQIVPLLEKGDIIIDGGNSHFP-DSNRRYEELKKKGILFVGSG 134 (497)
T ss_dssp CSSHHHHHHHHHHGGGCCTTCEEEECSCCCHH-HHHHHHHHHHHTTCEEEEEE
T ss_pred CChHHHHHHHHHHHHhCCCCCEEEECCCCChh-HHHHHHHHHHHcCCceeCCC
Confidence 55 35555554433 345556666776643 34455555555567666444
No 184
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=97.24 E-value=0.0023 Score=55.30 Aligned_cols=91 Identities=14% Similarity=0.148 Sum_probs=56.6
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCC---cc---------hhhhhcCCCCCCeeeecCHHHHHhcc
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVG---ED---------IGMVCDMEQPLEIPVMSDLTMVLGSI 101 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g---~d---------~g~~~g~~~~~gv~v~~dl~~~l~~~ 101 (257)
.++||+|+| +|.||+.+++.+.. .++++. ++|+...- +. ..++. ...+...+.+++++++
T Consensus 18 ~~~kIgiIG-~G~mG~alA~~L~~-~G~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~e~~~-- 89 (245)
T 3dtt_A 18 QGMKIAVLG-TGTVGRTMAGALAD-LGHEVT-IGTRDPKATLARAEPDAMGAPPFSQWL---PEHPHVHLAAFADVAA-- 89 (245)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHHH-TTCEEE-EEESCHHHHHTCC-------CCHHHHG---GGSTTCEEEEHHHHHH--
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHH-CCCEEE-EEeCChhhhhhhhhhhhhcchhhhHHH---hhcCceeccCHHHHHh--
Confidence 457999999 59999999998875 477765 45643100 00 11222 1223445678888875
Q ss_pred ccCCCccEEEEcCChHhHHHHHHH----HHHcCCCeEEeC
Q 025154 102 SQSKARAVVIDFTDASTVYDNVKQ----ATAFGMRSVVYV 137 (257)
Q Consensus 102 ~~~~~~DVvIDFT~p~~~~~~~~~----a~~~Gi~vViGT 137 (257)
.+|+||-...+....+.+.. .+ .|.-+|..+
T Consensus 90 ----~aDvVilavp~~~~~~~~~~i~~~~l-~g~ivi~~s 124 (245)
T 3dtt_A 90 ----GAELVVNATEGASSIAALTAAGAENL-AGKILVDIA 124 (245)
T ss_dssp ----HCSEEEECSCGGGHHHHHHHHCHHHH-TTSEEEECC
T ss_pred ----cCCEEEEccCcHHHHHHHHHhhhhhc-CCCEEEECC
Confidence 69999988777666555533 23 555555544
No 185
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=97.23 E-value=0.0042 Score=59.29 Aligned_cols=73 Identities=12% Similarity=0.122 Sum_probs=46.1
Q ss_pred CCCCceEEEEcCCChHHHHHHHHHHhc-CCcEEEEEEecCCCCcchhhhhcCC---------------CCCCeeeecCHH
Q 025154 32 PQSNIKVIINGAVKEIGRAAVIAVTKA-RGMEVAGAIDSHSVGEDIGMVCDME---------------QPLEIPVMSDLT 95 (257)
Q Consensus 32 ~~~~ikV~V~Ga~GrMG~~i~~~i~~~-~~~eLvg~vd~~~~g~d~g~~~g~~---------------~~~gv~v~~dl~ 95 (257)
+..||||+|+| .|.||..++..+++. +++++++ +|... ..+..+.... ...++.+++|++
T Consensus 6 ~~~~mkI~VIG-~G~vG~~~A~~La~~g~g~~V~~-~D~~~--~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~ 81 (481)
T 2o3j_A 6 FGKVSKVVCVG-AGYVGGPTCAMIAHKCPHITVTV-VDMNT--AKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIP 81 (481)
T ss_dssp SCCCCEEEEEC-CSTTHHHHHHHHHHHCTTSEEEE-ECSCH--HHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHH
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHhcCCCCEEEE-EECCH--HHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHH
Confidence 34468999999 599999999988865 3788775 56320 0011111000 012456678887
Q ss_pred HHHhccccCCCccEEEEcC
Q 025154 96 MVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 96 ~~l~~~~~~~~~DVvIDFT 114 (257)
+.+. ++|++|-..
T Consensus 82 ~~~~------~aDvvii~V 94 (481)
T 2o3j_A 82 KAIA------EADLIFISV 94 (481)
T ss_dssp HHHH------HCSEEEECC
T ss_pred HHhh------cCCEEEEec
Confidence 7775 689988763
No 186
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=97.22 E-value=0.00094 Score=55.84 Aligned_cols=87 Identities=15% Similarity=0.042 Sum_probs=52.1
Q ss_pred Cce-EEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeee-------ecCHHHHHhccccCCC
Q 025154 35 NIK-VIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-------MSDLTMVLGSISQSKA 106 (257)
Q Consensus 35 ~ik-V~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v-------~~dl~~~l~~~~~~~~ 106 (257)
||| |.|+|++|.+|+.+++.+.+..++++++...... ....++... ..++.+ .++++++++ +
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~--~~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~------~ 73 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLK--TRIPPEIID--HERVTVIEGSFQNPGXLEQAVT------N 73 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHH--HHSCHHHHT--STTEEEEECCTTCHHHHHHHHT------T
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCcc--ccchhhccC--CCceEEEECCCCCHHHHHHHHc------C
Confidence 566 9999999999999999988567888876543211 011111100 112221 123344553 7
Q ss_pred ccEEEEcCCh---HhHHHHHHHHHHcCCC
Q 025154 107 RAVVIDFTDA---STVYDNVKQATAFGMR 132 (257)
Q Consensus 107 ~DVvIDFT~p---~~~~~~~~~a~~~Gi~ 132 (257)
+|+||....+ + ....+..+.+.|..
T Consensus 74 ~d~vv~~ag~~n~~-~~~~~~~~~~~~~~ 101 (221)
T 3r6d_A 74 AEVVFVGAMESGSD-MASIVKALSRXNIR 101 (221)
T ss_dssp CSEEEESCCCCHHH-HHHHHHHHHHTTCC
T ss_pred CCEEEEcCCCCChh-HHHHHHHHHhcCCC
Confidence 8999976532 3 45556666777754
No 187
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=97.20 E-value=0.0053 Score=59.01 Aligned_cols=121 Identities=11% Similarity=0.097 Sum_probs=70.3
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCC-CCCCeeeecCHHHHHhccccCCCccEEEE
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDME-QPLEIPVMSDLTMVLGSISQSKARAVVID 112 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~-~~~gv~v~~dl~~~l~~~~~~~~~DVvID 112 (257)
.|+||+|+| .|.||+.+++.+.. .+++++ ++|+.. ..+..+...+ ....+..+.+++++.+.+ ..+|+||-
T Consensus 3 ~~~kIgiIG-lG~MG~~lA~~L~~-~G~~V~-v~dr~~--~~~~~l~~~g~~g~~i~~~~s~~e~v~~l---~~aDvVil 74 (484)
T 4gwg_A 3 AQADIALIG-LAVMGQNLILNMND-HGFVVC-AFNRTV--SKVDDFLANEAKGTKVVGAQSLKEMVSKL---KKPRRIIL 74 (484)
T ss_dssp CCBSEEEEC-CSHHHHHHHHHHHH-TTCCEE-EECSST--HHHHHHHHTTTTTSSCEECSSHHHHHHTB---CSSCEEEE
T ss_pred CCCEEEEEC-hhHHHHHHHHHHHH-CCCEEE-EEeCCH--HHHHHHHhcccCCCceeccCCHHHHHhhc---cCCCEEEE
Confidence 468999999 59999999998875 577765 567531 1222222110 011334468899887521 25899887
Q ss_pred cCChH-hHHHHHHHH---HHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEcc
Q 025154 113 FTDAS-TVYDNVKQA---TAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAP 163 (257)
Q Consensus 113 FT~p~-~~~~~~~~a---~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~sp 163 (257)
...+. .+.+.+... ++.|.-+|-++|+...+ ..++.+..++.|+..+=+|
T Consensus 75 ~Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~~~~-t~~~~~~l~~~Gi~fvd~p 128 (484)
T 4gwg_A 75 LVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSEYRD-TTRRCRDLKAKGILFVGSG 128 (484)
T ss_dssp CSCSSHHHHHHHHHHGGGCCTTCEEEECSCCCHHH-HHHHHHHHHHTTCEEEEEE
T ss_pred ecCChHHHHHHHHHHHHhcCCCCEEEEcCCCCchH-HHHHHHHHHhhccccccCC
Confidence 66553 444444433 34566666666665433 3344444455566655443
No 188
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=97.17 E-value=0.0029 Score=55.48 Aligned_cols=88 Identities=16% Similarity=0.203 Sum_probs=55.2
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCC-CCCCeeeecCHHHHHhccccCCCccEEEEc
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDME-QPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~-~~~gv~v~~dl~~~l~~~~~~~~~DVvIDF 113 (257)
|+||.|+|++|.+|+.+++.+.+ .+.++++..... +.. .+.+.. -..++. .++++++++ ++|+||.+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~--~~~--~~~~~~~~~~Dl~-~~~~~~~~~------~~d~Vih~ 69 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKN-DGNTPIILTRSI--GNK--AINDYEYRVSDYT-LEDLINQLN------DVDAVVHL 69 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEESCC--C-------CCEEEECCCC-HHHHHHHTT------TCSEEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHh-CCCEEEEEeCCC--Ccc--cCCceEEEEcccc-HHHHHHhhc------CCCEEEEc
Confidence 57999999999999999998875 478887655431 111 010000 011222 344555663 79999987
Q ss_pred CCh--------------HhHHHHHHHHHHcCCC-eE
Q 025154 114 TDA--------------STVYDNVKQATAFGMR-SV 134 (257)
Q Consensus 114 T~p--------------~~~~~~~~~a~~~Gi~-vV 134 (257)
..+ ..+...++.|.+.|+. +|
T Consensus 70 a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v 105 (311)
T 3m2p_A 70 AATRGSQGKISEFHDNEILTQNLYDACYENNISNIV 105 (311)
T ss_dssp CCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred cccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 532 2345677888888887 54
No 189
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.15 E-value=0.0047 Score=49.27 Aligned_cols=122 Identities=12% Similarity=0.168 Sum_probs=68.0
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeee-ec---CHHHHHhccccCCCccEEE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-MS---DLTMVLGSISQSKARAVVI 111 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v-~~---dl~~~l~~~~~~~~~DVvI 111 (257)
.+|+|+|+ |.||+.+++.+.. .+.+++ ++|+.. .....+. ...++.+ .. +.+.+.+. .-..+|+||
T Consensus 20 ~~v~IiG~-G~iG~~la~~L~~-~g~~V~-vid~~~--~~~~~~~---~~~g~~~~~~d~~~~~~l~~~--~~~~ad~Vi 89 (155)
T 2g1u_A 20 KYIVIFGC-GRLGSLIANLASS-SGHSVV-VVDKNE--YAFHRLN---SEFSGFTVVGDAAEFETLKEC--GMEKADMVF 89 (155)
T ss_dssp CEEEEECC-SHHHHHHHHHHHH-TTCEEE-EEESCG--GGGGGSC---TTCCSEEEESCTTSHHHHHTT--TGGGCSEEE
T ss_pred CcEEEECC-CHHHHHHHHHHHh-CCCeEE-EEECCH--HHHHHHH---hcCCCcEEEecCCCHHHHHHc--CcccCCEEE
Confidence 58999995 9999999998865 467766 455431 1111111 0123322 22 22222110 003689999
Q ss_pred EcCChHhHHHHH-HHHHH-cCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCchHHHHHHH
Q 025154 112 DFTDASTVYDNV-KQATA-FGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQ 173 (257)
Q Consensus 112 DFT~p~~~~~~~-~~a~~-~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfSlGvnll~ 173 (257)
..+..+.....+ ..+.. .+...++..+.- .+..+.+ ++.|+. +++|....+-.+.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~-~~~~~~l----~~~G~~-vi~p~~~~a~~l~~ 147 (155)
T 2g1u_A 90 AFTNDDSTNFFISMNARYMFNVENVIARVYD-PEKIKIF----EENGIK-TICPAVLMIEKVKE 147 (155)
T ss_dssp ECSSCHHHHHHHHHHHHHTSCCSEEEEECSS-GGGHHHH----HTTTCE-EECHHHHHHHHHHH
T ss_pred EEeCCcHHHHHHHHHHHHHCCCCeEEEEECC-HHHHHHH----HHCCCc-EEcHHHHHHHHHHH
Confidence 988665554444 44444 566666655421 2222333 347788 99898888765443
No 190
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.11 E-value=0.01 Score=45.42 Aligned_cols=125 Identities=12% Similarity=0.261 Sum_probs=70.9
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCee-eec---CHHHHHhccccCCCccEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIP-VMS---DLTMVLGSISQSKARAVV 110 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~-v~~---dl~~~l~~~~~~~~~DVv 110 (257)
.|||+|+|+ |+||+.+++.+.+ .+.+++ ++|+.. .....+.. ..++. +.. +.+.+.+. .-.++|++
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~-~g~~v~-~~d~~~--~~~~~~~~---~~~~~~~~~d~~~~~~l~~~--~~~~~d~v 73 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSE-KGHDIV-LIDIDK--DICKKASA---EIDALVINGDCTKIKTLEDA--GIEDADMY 73 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHH-TTCEEE-EEESCH--HHHHHHHH---HCSSEEEESCTTSHHHHHHT--TTTTCSEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHh-CCCeEE-EEECCH--HHHHHHHH---hcCcEEEEcCCCCHHHHHHc--CcccCCEE
Confidence 369999996 9999999998875 467766 456431 11122210 12332 222 33332210 00368999
Q ss_pred EEcCChHhHHH-HHHHHHHcC-CCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCchHHHHHHHHH
Q 025154 111 IDFTDASTVYD-NVKQATAFG-MRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQA 175 (257)
Q Consensus 111 IDFT~p~~~~~-~~~~a~~~G-i~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfSlGvnll~~~ 175 (257)
|..+..+.... ....+.+.+ ..+|+-+++... .+.+ ++.|+..+++|.+..+-.+...+
T Consensus 74 i~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~--~~~l----~~~g~~~v~~p~~~~~~~~~~~~ 134 (140)
T 1lss_A 74 IAVTGKEEVNLMSSLLAKSYGINKTIARISEIEY--KDVF----ERLGVDVVVSPELIAANYIEKLI 134 (140)
T ss_dssp EECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTH--HHHH----HHTTCSEEECHHHHHHHHHHHHH
T ss_pred EEeeCCchHHHHHHHHHHHcCCCEEEEEecCHhH--HHHH----HHcCCCEEECHHHHHHHHHHHHh
Confidence 98875544433 334444555 356665666443 2334 34678889999988887655443
No 191
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=97.08 E-value=0.0012 Score=55.09 Aligned_cols=84 Identities=7% Similarity=0.169 Sum_probs=50.4
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeee----ecC-HHHHHhccccCCCccEE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV----MSD-LTMVLGSISQSKARAVV 110 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v----~~d-l~~~l~~~~~~~~~DVv 110 (257)
|||.|+|++|.+|+.+++.+.+ .+.++++...+.. ....+ .++.+ ..| .+++.+.+ .++|+|
T Consensus 1 M~ilItGatG~iG~~l~~~L~~-~g~~V~~~~R~~~---~~~~~------~~~~~~~~D~~d~~~~~~~~~---~~~d~v 67 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLST-TDYQIYAGARKVE---QVPQY------NNVKAVHFDVDWTPEEMAKQL---HGMDAI 67 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTT-SSCEEEEEESSGG---GSCCC------TTEEEEECCTTSCHHHHHTTT---TTCSEE
T ss_pred CeEEEECCCCHHHHHHHHHHHH-CCCEEEEEECCcc---chhhc------CCceEEEecccCCHHHHHHHH---cCCCEE
Confidence 5899999999999999998875 5788887654321 00000 11211 123 33332211 368999
Q ss_pred EEcCCh----------HhHHHHHHHHHHcCCC
Q 025154 111 IDFTDA----------STVYDNVKQATAFGMR 132 (257)
Q Consensus 111 IDFT~p----------~~~~~~~~~a~~~Gi~ 132 (257)
|..... ......++.|.+.|+.
T Consensus 68 i~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~ 99 (219)
T 3dqp_A 68 INVSGSGGKSLLKVDLYGAVKLMQAAEKAEVK 99 (219)
T ss_dssp EECCCCTTSSCCCCCCHHHHHHHHHHHHTTCC
T ss_pred EECCcCCCCCcEeEeHHHHHHHHHHHHHhCCC
Confidence 987532 2355666777777754
No 192
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=97.07 E-value=0.0084 Score=52.20 Aligned_cols=90 Identities=12% Similarity=0.073 Sum_probs=54.5
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeee----ecC---HHHHHhccccCCCc
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV----MSD---LTMVLGSISQSKAR 107 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v----~~d---l~~~l~~~~~~~~~ 107 (257)
+++|.|+|++|.+|+.+++.+.+..+.++.+...... ......+. ..++.+ ..| ++++++ ++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~-~~~~~~l~----~~~~~~~~~D~~d~~~l~~~~~------~~ 73 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPR-KKAAKELR----LQGAEVVQGDQDDQVIMELALN------GA 73 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTT-SHHHHHHH----HTTCEEEECCTTCHHHHHHHHT------TC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCC-CHHHHHHH----HCCCEEEEecCCCHHHHHHHHh------cC
Confidence 4689999999999999999988764488877653321 11111111 112222 123 444553 69
Q ss_pred cEEEEcCCh----------HhHHHHHHHHHHcCCC-eEE
Q 025154 108 AVVIDFTDA----------STVYDNVKQATAFGMR-SVV 135 (257)
Q Consensus 108 DVvIDFT~p----------~~~~~~~~~a~~~Gi~-vVi 135 (257)
|+||..+.+ ......+..|.+.|+. +|.
T Consensus 74 d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~ 112 (299)
T 2wm3_A 74 YATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVY 112 (299)
T ss_dssp SEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred CEEEEeCCCCccccchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 999987642 1234566777778875 444
No 193
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=97.06 E-value=0.00075 Score=62.33 Aligned_cols=97 Identities=22% Similarity=0.177 Sum_probs=60.7
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecC--------------CCCcchhhh--hcCC---CCCCeeeec--C
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH--------------SVGEDIGMV--CDME---QPLEIPVMS--D 93 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~--------------~~g~d~g~~--~g~~---~~~gv~v~~--d 93 (257)
.+||+|.| +||+||.+.+++.++++++||++-|+. --|+--+++ .+.. ....+.++. |
T Consensus 11 ~~kv~ING-fGrIGr~v~ra~~~~~~~evvaInd~~~~~~~~a~l~~yDS~hg~~~~~v~~~~~~l~v~Gk~i~v~~~~d 89 (345)
T 2b4r_O 11 ATKLGING-FGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKD 89 (345)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESSCEEEEECCSS
T ss_pred heEEEEeC-CchHHHHHHHHHhhCCCcEEEEEcCCCCChHHHHHHhccCCCCCcCCCCEEEcCCEEEECCEEEEEEEcCC
Confidence 58999999 699999999999999999999998821 001100000 0000 001233342 4
Q ss_pred HHHHH-hccccCCCccEEEEcCChHhHHHHHHHHHHcCCC-eEEe
Q 025154 94 LTMVL-GSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVVY 136 (257)
Q Consensus 94 l~~~l-~~~~~~~~~DVvIDFT~p~~~~~~~~~a~~~Gi~-vViG 136 (257)
++++- .+ .++|+|++.|-.....+.+..+++.|.. +||-
T Consensus 90 p~~~~w~~----~gvDiV~estG~f~s~e~a~~hl~aGakkVVIs 130 (345)
T 2b4r_O 90 PSQIPWGK----CQVDVVCESTGVFLTKELASSHLKGGAKKVIMS 130 (345)
T ss_dssp GGGCCHHH----HTCSEEEECSSSCCSHHHHTHHHHTTCSEEEES
T ss_pred cccCcccc----cCCCEEEECcCccccHhhHHHHHHCCCCEEEEC
Confidence 43321 10 2689999887666677788888888875 4553
No 194
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=97.04 E-value=0.0021 Score=54.36 Aligned_cols=74 Identities=19% Similarity=0.150 Sum_probs=48.4
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEc
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDF 113 (257)
.++||+|+| .|.||+.+++.+.+ .+.++. ++|+.. + .+ .++|+||-.
T Consensus 18 ~~~~I~iiG-~G~mG~~la~~l~~-~g~~V~-~~~~~~-------------~-----------~~------~~aD~vi~a 64 (209)
T 2raf_A 18 QGMEITIFG-KGNMGQAIGHNFEI-AGHEVT-YYGSKD-------------Q-----------AT------TLGEIVIMA 64 (209)
T ss_dssp --CEEEEEC-CSHHHHHHHHHHHH-TTCEEE-EECTTC-------------C-----------CS------SCCSEEEEC
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHH-CCCEEE-EEcCCH-------------H-----------Hh------ccCCEEEEc
Confidence 467999999 59999999998874 567765 345421 0 12 368998877
Q ss_pred CChHhHHHHHHH---HHHcCCCeEEeCCCCC
Q 025154 114 TDASTVYDNVKQ---ATAFGMRSVVYVPHIQ 141 (257)
Q Consensus 114 T~p~~~~~~~~~---a~~~Gi~vViGTTG~s 141 (257)
..+....+.+.. .++ +..+|.-++|++
T Consensus 65 v~~~~~~~v~~~l~~~~~-~~~vi~~~~g~~ 94 (209)
T 2raf_A 65 VPYPALAALAKQYATQLK-GKIVVDITNPLN 94 (209)
T ss_dssp SCHHHHHHHHHHTHHHHT-TSEEEECCCCBC
T ss_pred CCcHHHHHHHHHHHHhcC-CCEEEEECCCCC
Confidence 776655555443 344 666666667775
No 195
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=97.00 E-value=0.0018 Score=62.54 Aligned_cols=118 Identities=12% Similarity=0.068 Sum_probs=72.5
Q ss_pred ceEEEEcCCChHHHHHHHHHHhc-----CCcEEEEEEecCCCCcchhhhhcCCCCCCeee----ecCHHHHHhccccCCC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKA-----RGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV----MSDLTMVLGSISQSKA 106 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~-----~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v----~~dl~~~l~~~~~~~~ 106 (257)
.||+|+| +|.||..+++.+... .+++++...++.....+... ..|+.+ ..++++++. .
T Consensus 55 KkIgIIG-lGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~------e~G~~v~d~ta~s~aEAa~------~ 121 (525)
T 3fr7_A 55 KQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEAR------AAGFTEESGTLGDIWETVS------G 121 (525)
T ss_dssp SEEEEEC-CTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHH------HTTCCTTTTCEEEHHHHHH------H
T ss_pred CEEEEEe-EhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHH------HCCCEEecCCCCCHHHHHh------c
Confidence 6999999 599999999998765 27777655554211111111 234443 357888885 6
Q ss_pred ccEEEEcCChHhHHHHHHH---HHHcCCCeEEeCCCCCHHHHHH-HHHHhhhcCceEE-EccCchHHH
Q 025154 107 RAVVIDFTDASTVYDNVKQ---ATAFGMRSVVYVPHIQLETVSA-LSAFCDKASMGCL-IAPTLSIGS 169 (257)
Q Consensus 107 ~DVvIDFT~p~~~~~~~~~---a~~~Gi~vViGTTG~s~e~~~~-L~~~a~~~gipvl-~spNfSlGv 169 (257)
+|+||-...|....+.+.. .++.|. +|+=..|++-+.++. ....-+. ++|+ +.||..-=+
T Consensus 122 ADVVILaVP~~~~~eVl~eI~p~LK~Ga-ILs~AaGf~I~~le~~~i~~p~d--v~VVrVmPNtPg~~ 186 (525)
T 3fr7_A 122 SDLVLLLISDAAQADNYEKIFSHMKPNS-ILGLSHGFLLGHLQSAGLDFPKN--ISVIAVCPKGMGPS 186 (525)
T ss_dssp CSEEEECSCHHHHHHHHHHHHHHSCTTC-EEEESSSHHHHHHHHTTCCCCTT--SEEEEEEESSCHHH
T ss_pred CCEEEECCChHHHHHHHHHHHHhcCCCC-eEEEeCCCCHHHHhhhcccCCCC--CcEEEEecCCCchh
Confidence 9999988877665554433 233343 456677987544332 1122233 6666 889988443
No 196
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=96.97 E-value=0.0032 Score=56.53 Aligned_cols=93 Identities=15% Similarity=0.127 Sum_probs=57.2
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhh---cC---CCC----CCe-eeecCHHHHHhcccc
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVC---DM---EQP----LEI-PVMSDLTMVLGSISQ 103 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~---g~---~~~----~gv-~v~~dl~~~l~~~~~ 103 (257)
+|||+|+|+ |.||+.++..+.. .++++. ++++.. .....+. +. +.. ..+ .+++++++++.
T Consensus 4 ~mki~iiG~-G~~G~~~a~~L~~-~g~~V~-~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 74 (359)
T 1bg6_A 4 SKTYAVLGL-GNGGHAFAAYLAL-KGQSVL-AWDIDA--QRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVK---- 74 (359)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHH-TTCEEE-EECSCH--HHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHT----
T ss_pred cCeEEEECC-CHHHHHHHHHHHh-CCCEEE-EEeCCH--HHHHHHHhcCCeEEeccccccccccceecCCHHHHHh----
Confidence 479999995 9999999998764 567754 566431 1111111 00 000 011 35678888774
Q ss_pred CCCccEEEEcCChHhHHHHHHHHH---HcCCCeEEeCCC
Q 025154 104 SKARAVVIDFTDASTVYDNVKQAT---AFGMRSVVYVPH 139 (257)
Q Consensus 104 ~~~~DVvIDFT~p~~~~~~~~~a~---~~Gi~vViGTTG 139 (257)
++|+||-++.+..+.+.+.... +.+..+|.- .|
T Consensus 75 --~~D~vi~~v~~~~~~~~~~~l~~~l~~~~~vv~~-~~ 110 (359)
T 1bg6_A 75 --DADVILIVVPAIHHASIAANIASYISEGQLIILN-PG 110 (359)
T ss_dssp --TCSEEEECSCGGGHHHHHHHHGGGCCTTCEEEES-SC
T ss_pred --cCCEEEEeCCchHHHHHHHHHHHhCCCCCEEEEc-CC
Confidence 7999998887777666665543 345556654 45
No 197
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=96.97 E-value=0.0015 Score=58.28 Aligned_cols=121 Identities=15% Similarity=0.130 Sum_probs=67.4
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEec--CCCCcchhhhhcCCC--C-----CCeeeec--CHHHHHhccccC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS--HSVGEDIGMVCDMEQ--P-----LEIPVMS--DLTMVLGSISQS 104 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~--~~~g~d~g~~~g~~~--~-----~gv~v~~--dl~~~l~~~~~~ 104 (257)
|||+|+|+ |.||+.++..+.+ .+.++. ++++ . ......+...+. . ..+.+++ ++++++.
T Consensus 1 m~I~iiG~-G~mG~~~a~~L~~-~g~~V~-~~~r~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~----- 70 (335)
T 1txg_A 1 MIVSILGA-GAMGSALSVPLVD-NGNEVR-IWGTEFD--TEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLE----- 70 (335)
T ss_dssp CEEEEESC-CHHHHHHHHHHHH-HCCEEE-EECCGGG--HHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHT-----
T ss_pred CEEEEECc-CHHHHHHHHHHHh-CCCeEE-EEEccCC--HHHHHHHHHhCcCcccCccccceEEecHHhHHHHHh-----
Confidence 58999995 9999999998875 456655 4554 2 111222211100 0 1124555 7777764
Q ss_pred CCccEEEEcCChHhHHHHHHHHH--HcCCCeEEeCCCC---CHHHHHHHHHHhhh--c---CceEEEccCchH
Q 025154 105 KARAVVIDFTDASTVYDNVKQAT--AFGMRSVVYVPHI---QLETVSALSAFCDK--A---SMGCLIAPTLSI 167 (257)
Q Consensus 105 ~~~DVvIDFT~p~~~~~~~~~a~--~~Gi~vViGTTG~---s~e~~~~L~~~a~~--~---gipvl~spNfSl 167 (257)
++|+||-.+.+....+.+.... ..+..+|.-+.|+ .+...+.+.+...+ . ..++...||+..
T Consensus 71 -~~D~vi~~v~~~~~~~v~~~i~~l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~p~~~~ 142 (335)
T 1txg_A 71 -NAEVVLLGVSTDGVLPVMSRILPYLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDLRERTVAITGPAIAR 142 (335)
T ss_dssp -TCSEEEECSCGGGHHHHHHHHTTTCCSCEEEECCCSEEEETTEEEEHHHHHHTTSTTCGGGEEEEESSCCHH
T ss_pred -cCCEEEEcCChHHHHHHHHHHhcCCCCCEEEEEcCcCccCCCCcCccHHHHHHHhcCCCCcEEEEECCCcHH
Confidence 7999998877776666555432 2344444434477 32111233333222 1 146778888753
No 198
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=96.96 E-value=0.0014 Score=60.17 Aligned_cols=98 Identities=22% Similarity=0.238 Sum_probs=61.4
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCC--------------CCcchhhhhcCC-----CCCCeeee--cC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS--------------VGEDIGMVCDME-----QPLEIPVM--SD 93 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~--------------~g~d~g~~~g~~-----~~~gv~v~--~d 93 (257)
|+||+|.| .||+||.+.|++.+.+++++|++=|+.. -|+--+++.-.+ ....+.++ .|
T Consensus 1 ~~kv~ING-fGrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~i~Gk~I~v~~e~d 79 (332)
T 3pym_A 1 MVRVAING-FGRIGRLVMRIALSRPNVEVVALNDPFITNDYAAYMFKYDSTHGRYAGEVSHDDKHIIVDGKKIATYQERD 79 (332)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHSTTCEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred CeEEEEEC-CCcHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhcccCCCCCCCCcEEEcCCEEEECCEEEEEEeecc
Confidence 68999999 5999999999998888999999877410 011111110000 00123443 34
Q ss_pred HHHHHhccccCCCccEEEEcCChHhHHHHHHHHHHcCCC-eEEe
Q 025154 94 LTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVVY 136 (257)
Q Consensus 94 l~~~l~~~~~~~~~DVvIDFT~p~~~~~~~~~a~~~Gi~-vViG 136 (257)
++++-= .+.++|++++.|-.....+.+...++.|.. |||-
T Consensus 80 p~~i~w---~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIs 120 (332)
T 3pym_A 80 PANLPW---GSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVIT 120 (332)
T ss_dssp GGGSCT---TTTTCSEEEECSSSSCSHHHHHHHHHTTCSEEEES
T ss_pred cccCCc---cccCccEEEEecccccCHHHHHHHHHcCCCEEEEC
Confidence 544310 013789999877666777888888888875 4443
No 199
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=96.95 E-value=0.0013 Score=60.32 Aligned_cols=98 Identities=27% Similarity=0.223 Sum_probs=62.6
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEec-------------CCCCcchhhhhcCC-----CCCCeeeec--CHH
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS-------------HSVGEDIGMVCDME-----QPLEIPVMS--DLT 95 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~-------------~~~g~d~g~~~g~~-----~~~gv~v~~--dl~ 95 (257)
+||||+|+ |++||.+.+++.++ +++++++-|. ...|+-.+++.-.+ ....+.++. |++
T Consensus 1 ikVgInG~-G~IGr~vlr~l~~~-~~evvaind~~~~~~~a~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~dp~ 78 (331)
T 2g82_O 1 MKVGINGF-GRIGRQVFRILHSR-GVEVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPK 78 (331)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHH-TCCEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGG
T ss_pred CEEEEECc-CHHHHHHHHHHHhC-CCEEEEEecCCCHHHHhHhhhccccCCCCCceEEEcCCEEEECCEEEEEEecCChh
Confidence 59999997 99999999998887 9999987762 11232111110000 011344542 454
Q ss_pred HHH-hccccCCCccEEEEcCChHhHHHHHHHHHHcCC-CeEEeCCC
Q 025154 96 MVL-GSISQSKARAVVIDFTDASTVYDNVKQATAFGM-RSVVYVPH 139 (257)
Q Consensus 96 ~~l-~~~~~~~~~DVvIDFT~p~~~~~~~~~a~~~Gi-~vViGTTG 139 (257)
++- .+ .++|+|++.|......+.+...++.|. .+||..++
T Consensus 79 ~l~w~~----~gvDiV~estG~~~s~e~a~~~l~aGakkvVIsaps 120 (331)
T 2g82_O 79 EIPWAE----AGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPA 120 (331)
T ss_dssp GSCTTT----TTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred hCcccc----cCCCEEEECCCchhhHHHHHHHHHCCCCEEEECCCC
Confidence 432 11 268999988877778888888999986 35555443
No 200
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=96.94 E-value=0.0064 Score=57.08 Aligned_cols=68 Identities=21% Similarity=0.329 Sum_probs=43.7
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCC---------------CC-eeeecCHHHHHh
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQP---------------LE-IPVMSDLTMVLG 99 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~---------------~g-v~v~~dl~~~l~ 99 (257)
|||+|+| +|.||..++..+++ .++++++ +|... ..+..+.....+ .+ +..++|+++++.
T Consensus 1 mkI~VIG-~G~vG~~~A~~la~-~G~~V~~-~d~~~--~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~ 75 (436)
T 1mv8_A 1 MRISIFG-LGYVGAVCAGCLSA-RGHEVIG-VDVSS--TKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVL 75 (436)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHH-TTCEEEE-ECSCH--HHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHH
T ss_pred CEEEEEC-CCHHHHHHHHHHHH-CCCEEEE-EECCH--HHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhc
Confidence 5899999 59999999988775 5778654 56420 111111100000 22 667889988775
Q ss_pred ccccCCCccEEEEcC
Q 025154 100 SISQSKARAVVIDFT 114 (257)
Q Consensus 100 ~~~~~~~~DVvIDFT 114 (257)
++|++|-..
T Consensus 76 ------~aDvviiaV 84 (436)
T 1mv8_A 76 ------DSDVSFICV 84 (436)
T ss_dssp ------TCSEEEECC
T ss_pred ------cCCEEEEEc
Confidence 799998776
No 201
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=96.92 E-value=0.0018 Score=57.12 Aligned_cols=95 Identities=13% Similarity=0.120 Sum_probs=57.0
Q ss_pred CCCceEEEEcCCChHHHHHHHHHHhcC----C-cEEEEEEecCCCCcchhhhhcCCCCCCee--------------eecC
Q 025154 33 QSNIKVIINGAVKEIGRAAVIAVTKAR----G-MEVAGAIDSHSVGEDIGMVCDMEQPLEIP--------------VMSD 93 (257)
Q Consensus 33 ~~~ikV~V~Ga~GrMG~~i~~~i~~~~----~-~eLvg~vd~~~~g~d~g~~~g~~~~~gv~--------------v~~d 93 (257)
..||||+|+|+ |.||..++..+.+.+ + .++. ++++. .....+.. +.|+. ++++
T Consensus 6 ~~~m~I~iiG~-G~mG~~~a~~L~~~~~~~~g~~~V~-~~~r~---~~~~~l~~---~~g~~~~~~~~~~~~~~~~~~~~ 77 (317)
T 2qyt_A 6 QQPIKIAVFGL-GGVGGYYGAMLALRAAATDGLLEVS-WIARG---AHLEAIRA---AGGLRVVTPSRDFLARPTCVTDN 77 (317)
T ss_dssp -CCEEEEEECC-SHHHHHHHHHHHHHHHHTTSSEEEE-EECCH---HHHHHHHH---HTSEEEECSSCEEEECCSEEESC
T ss_pred CCCCEEEEECc-CHHHHHHHHHHHhCccccCCCCCEE-EEEcH---HHHHHHHh---cCCeEEEeCCCCeEEecceEecC
Confidence 34589999995 999999999887651 5 6665 34431 11222211 01222 2345
Q ss_pred HHHHHhccccCCCccEEEEcCChHhHHHHHHHHHH---cCCCeEEeCCCCCH
Q 025154 94 LTMVLGSISQSKARAVVIDFTDASTVYDNVKQATA---FGMRSVVYVPHIQL 142 (257)
Q Consensus 94 l~~~l~~~~~~~~~DVvIDFT~p~~~~~~~~~a~~---~Gi~vViGTTG~s~ 142 (257)
.+. + ..+|+||-.+.+..+.+.+..... .+..+|.-++|+..
T Consensus 78 ~~~-~------~~~D~vil~vk~~~~~~v~~~i~~~l~~~~~iv~~~nG~~~ 122 (317)
T 2qyt_A 78 PAE-V------GTVDYILFCTKDYDMERGVAEIRPMIGQNTKILPLLNGADI 122 (317)
T ss_dssp HHH-H------CCEEEEEECCSSSCHHHHHHHHGGGEEEEEEEEECSCSSSH
T ss_pred ccc-c------CCCCEEEEecCcccHHHHHHHHHhhcCCCCEEEEccCCCCc
Confidence 443 4 379999988777666555544332 35566766789875
No 202
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.90 E-value=0.0074 Score=47.42 Aligned_cols=129 Identities=9% Similarity=0.059 Sum_probs=72.7
Q ss_pred CCCCCCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeee-ec---CHHHHHhccccCC
Q 025154 30 NPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-MS---DLTMVLGSISQSK 105 (257)
Q Consensus 30 ~~~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v-~~---dl~~~l~~~~~~~ 105 (257)
+|.+.+.+|.|+|+ |+||+.+++.+.+ .+++++. +|... ..+..+. ..|+.+ +. +.+ .+.+. .-.
T Consensus 2 ~~~~~~~~viIiG~-G~~G~~la~~L~~-~g~~v~v-id~~~--~~~~~~~----~~g~~~i~gd~~~~~-~l~~a-~i~ 70 (140)
T 3fwz_A 2 NAVDICNHALLVGY-GRVGSLLGEKLLA-SDIPLVV-IETSR--TRVDELR----ERGVRAVLGNAANEE-IMQLA-HLE 70 (140)
T ss_dssp CCCCCCSCEEEECC-SHHHHHHHHHHHH-TTCCEEE-EESCH--HHHHHHH----HTTCEEEESCTTSHH-HHHHT-TGG
T ss_pred CcccCCCCEEEECc-CHHHHHHHHHHHH-CCCCEEE-EECCH--HHHHHHH----HcCCCEEECCCCCHH-HHHhc-Ccc
Confidence 45555679999995 9999999998874 5777764 55421 1111121 123332 22 222 22210 003
Q ss_pred CccEEEEcCChHhH-HHHHHHHHHc--CCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCchHHHHHHHHH
Q 025154 106 ARAVVIDFTDASTV-YDNVKQATAF--GMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQA 175 (257)
Q Consensus 106 ~~DVvIDFT~p~~~-~~~~~~a~~~--Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfSlGvnll~~~ 175 (257)
++|++|-.+..+.. ...+..+.+. ++++|.=. .+++..+.|+ +.|+-.++.|....+-.++..+
T Consensus 71 ~ad~vi~~~~~~~~n~~~~~~a~~~~~~~~iiar~--~~~~~~~~l~----~~G~d~vi~p~~~~a~~i~~~l 137 (140)
T 3fwz_A 71 CAKWLILTIPNGYEAGEIVASARAKNPDIEIIARA--HYDDEVAYIT----ERGANQVVMGEREIARTMLELL 137 (140)
T ss_dssp GCSEEEECCSCHHHHHHHHHHHHHHCSSSEEEEEE--SSHHHHHHHH----HTTCSEEEEHHHHHHHHHHHHH
T ss_pred cCCEEEEECCChHHHHHHHHHHHHHCCCCeEEEEE--CCHHHHHHHH----HCCCCEEECchHHHHHHHHHHh
Confidence 68988876654333 3344444443 44544322 3455555554 4678889999888887665543
No 203
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=96.89 E-value=0.003 Score=60.75 Aligned_cols=76 Identities=8% Similarity=0.070 Sum_probs=64.6
Q ss_pred CCeeeecCHHHHHhccccCCCccEEEEcCChHhHHHHHHHHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCc
Q 025154 86 LEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTL 165 (257)
Q Consensus 86 ~gv~v~~dl~~~l~~~~~~~~~DVvIDFT~p~~~~~~~~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNf 165 (257)
.++|+|..+.++.+. ...+|+.|.|..++.+.+.++.|.++|+++||=|.||..++.++|.++|+++|+.+ +.||-
T Consensus 19 ~~~Pv~~~~~~~~~~---p~~~DlavI~vPa~~v~~~v~e~~~~Gv~~viis~Gf~~~~~~~l~~~A~~~g~rl-iGPNc 94 (480)
T 3dmy_A 19 QALTQVRRWDSACQK---LPDANLALISVAGEYAAELANQALDRNLNVMMFSDNVTLEDEIQLKTRAREKGLLV-MGPDC 94 (480)
T ss_dssp -CCEEESSHHHHHHH---STTCCEEEECSCHHHHHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHHHTTCCE-ECSSC
T ss_pred CCCcccchHHHHHhc---CCCCCEEEEecCHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHHHHHcCCEE-EecCc
Confidence 368999888887653 13689999999999999999999999999888788999877788999999988755 68998
No 204
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=96.89 E-value=0.0073 Score=49.05 Aligned_cols=83 Identities=22% Similarity=0.264 Sum_probs=51.0
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeee-------ecCHHHHHhccccCCCcc
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-------MSDLTMVLGSISQSKARA 108 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v-------~~dl~~~l~~~~~~~~~D 108 (257)
+||.|+|++|.+|+.+++.+.+. +.++++...+.. ....+. ..++.+ .++++++++ ++|
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~-g~~V~~~~r~~~---~~~~~~----~~~~~~~~~D~~~~~~~~~~~~------~~d 69 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQA-GYEVTVLVRDSS---RLPSEG----PRPAHVVVGDVLQAADVDKTVA------GQD 69 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCGG---GSCSSS----CCCSEEEESCTTSHHHHHHHHT------TCS
T ss_pred CEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEEeChh---hccccc----CCceEEEEecCCCHHHHHHHHc------CCC
Confidence 68999999999999999998764 688876553211 000000 112211 123444553 689
Q ss_pred EEEEcCCh-----------HhHHHHHHHHHHcCCC
Q 025154 109 VVIDFTDA-----------STVYDNVKQATAFGMR 132 (257)
Q Consensus 109 VvIDFT~p-----------~~~~~~~~~a~~~Gi~ 132 (257)
+||.+..+ ......++.|.+.++.
T Consensus 70 ~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 104 (206)
T 1hdo_A 70 AVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVD 104 (206)
T ss_dssp EEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCC
T ss_pred EEEECccCCCCCCccchHHHHHHHHHHHHHHhCCC
Confidence 99987632 2345666777777764
No 205
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=96.88 E-value=0.015 Score=55.14 Aligned_cols=71 Identities=11% Similarity=0.122 Sum_probs=45.5
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcC-CcEEEEEEecCCCCcchhh---------------hhcCCCCCCeeeecCHHHH
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKAR-GMEVAGAIDSHSVGEDIGM---------------VCDMEQPLEIPVMSDLTMV 97 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~-~~eLvg~vd~~~~g~d~g~---------------~~g~~~~~gv~v~~dl~~~ 97 (257)
.||||+|+| +|.||..++..+++.. ++++++ +|... ..+.. +.......++..++|++++
T Consensus 4 ~~mkI~VIG-~G~mG~~lA~~La~~g~G~~V~~-~d~~~--~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~ 79 (467)
T 2q3e_A 4 EIKKICCIG-AGYVGGPTCSVIAHMCPEIRVTV-VDVNE--SRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDA 79 (467)
T ss_dssp CCCEEEEEC-CSTTHHHHHHHHHHHCTTSEEEE-ECSCH--HHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHH
T ss_pred CccEEEEEC-CCHHHHHHHHHHHhcCCCCEEEE-EECCH--HHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHH
Confidence 468999999 5999999999887652 788654 56420 00111 1100001256677888887
Q ss_pred HhccccCCCccEEEEcC
Q 025154 98 LGSISQSKARAVVIDFT 114 (257)
Q Consensus 98 l~~~~~~~~~DVvIDFT 114 (257)
+. ++|++|-..
T Consensus 80 ~~------~aDvViiaV 90 (467)
T 2q3e_A 80 IK------EADLVFISV 90 (467)
T ss_dssp HH------HCSEEEECC
T ss_pred Hh------cCCEEEEEc
Confidence 75 689988764
No 206
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=96.86 E-value=0.0035 Score=56.28 Aligned_cols=91 Identities=18% Similarity=0.182 Sum_probs=56.5
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeee-ec----C---HHHHHhccccCCC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-MS----D---LTMVLGSISQSKA 106 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v-~~----d---l~~~l~~~~~~~~ 106 (257)
|+||.|+|++|.+|+.+++.+.+.++.++++...+.. ....+.. ..++.+ .. | ++++++ +
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~---~~~~~~~---~~~v~~~~~Dl~~d~~~~~~~~~------~ 91 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTD---RLGDLVK---HERMHFFEGDITINKEWVEYHVK------K 91 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCT---TTGGGGG---STTEEEEECCTTTCHHHHHHHHH------H
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChh---hhhhhcc---CCCeEEEeCccCCCHHHHHHHhc------c
Confidence 5799999999999999999998777889887654321 1111111 122322 11 2 334453 6
Q ss_pred ccEEEEcC---ChHh---------------HHHHHHHHHHcCCCeEEeC
Q 025154 107 RAVVIDFT---DAST---------------VYDNVKQATAFGMRSVVYV 137 (257)
Q Consensus 107 ~DVvIDFT---~p~~---------------~~~~~~~a~~~Gi~vViGT 137 (257)
+|+||.+. .+.. +...++.|.+.|..+|.-.
T Consensus 92 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~v~~S 140 (372)
T 3slg_A 92 CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPS 140 (372)
T ss_dssp CSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHTCEEEEEC
T ss_pred CCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEeC
Confidence 99999854 2221 1346777778887776433
No 207
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=96.82 E-value=0.0054 Score=56.56 Aligned_cols=106 Identities=14% Similarity=0.066 Sum_probs=60.4
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEe---cCCCCcchhhhhcC-C------CCCC--------ee-eecCHH
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID---SHSVGEDIGMVCDM-E------QPLE--------IP-VMSDLT 95 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd---~~~~g~d~g~~~g~-~------~~~g--------v~-v~~dl~ 95 (257)
||||+|+|+ |.||..++..++...+.++.. ++ +. ...+..+... + ...+ +. +++|++
T Consensus 2 ~mkI~ViGa-G~~G~~~a~~La~~~G~~V~~-~~~~~r~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (404)
T 3c7a_A 2 TVKVCVCGG-GNGAHTLSGLAASRDGVEVRV-LTLFADE--AERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPE 77 (404)
T ss_dssp CEEEEEECC-SHHHHHHHHHHTTSTTEEEEE-ECCSTTH--HHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHH
T ss_pred CceEEEECC-CHHHHHHHHHHHhCCCCEEEE-EeCCCCc--HHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHH
Confidence 589999996 999999998876445777664 45 21 0111111100 0 0001 22 567888
Q ss_pred HHHhccccCCCccEEEEcCChHhHHHHHHHHHH---cCCCeEE--eCCCCCHHHHHHHHH
Q 025154 96 MVLGSISQSKARAVVIDFTDASTVYDNVKQATA---FGMRSVV--YVPHIQLETVSALSA 150 (257)
Q Consensus 96 ~~l~~~~~~~~~DVvIDFT~p~~~~~~~~~a~~---~Gi~vVi--GTTG~s~e~~~~L~~ 150 (257)
+++. .+|+||-++.+....+.+..... .+..||. ++.|+..+..+.+.+
T Consensus 78 ~a~~------~aD~Vilav~~~~~~~v~~~l~~~l~~~~ivv~~~~~~G~~~~~~~~l~~ 131 (404)
T 3c7a_A 78 IAIS------GADVVILTVPAFAHEGYFQAMAPYVQDSALIVGLPSQAGFEFQCRDILGD 131 (404)
T ss_dssp HHHT------TCSEEEECSCGGGHHHHHHHHTTTCCTTCEEEETTCCTTHHHHHHHHHGG
T ss_pred HHhC------CCCEEEEeCchHHHHHHHHHHHhhCCCCcEEEEcCCCccHHHHHHHHHHh
Confidence 8774 79999988776666655554432 3444554 445543332234443
No 208
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=96.82 E-value=0.0044 Score=54.62 Aligned_cols=100 Identities=13% Similarity=0.105 Sum_probs=57.9
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhh---------------cCCC------CCCeeeecC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVC---------------DMEQ------PLEIPVMSD 93 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~---------------g~~~------~~gv~v~~d 93 (257)
+.||+|+|+ |.||+.+++.++. .+++++. +|+.. ..+.... +... ...+..++|
T Consensus 4 ~~kV~VIGa-G~mG~~iA~~la~-~G~~V~l-~d~~~--~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~ 78 (283)
T 4e12_A 4 ITNVTVLGT-GVLGSQIAFQTAF-HGFAVTA-YDINT--DALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDD 78 (283)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHH-TTCEEEE-ECSSH--HHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESC
T ss_pred CCEEEEECC-CHHHHHHHHHHHh-CCCeEEE-EeCCH--HHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCC
Confidence 468999995 9999999998774 5888664 66431 0111100 0000 012456788
Q ss_pred HHHHHhccccCCCccEEEEcCChH--hHHHHHHH---HHHcCCCeEEeCCCCCHHHH
Q 025154 94 LTMVLGSISQSKARAVVIDFTDAS--TVYDNVKQ---ATAFGMRSVVYVPHIQLETV 145 (257)
Q Consensus 94 l~~~l~~~~~~~~~DVvIDFT~p~--~~~~~~~~---a~~~Gi~vViGTTG~s~e~~ 145 (257)
+++++. ++|+||....++ .....+.. .+..+.-++.-|++++.+++
T Consensus 79 ~~~~~~------~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~~~l 129 (283)
T 4e12_A 79 LAQAVK------DADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPSDL 129 (283)
T ss_dssp HHHHTT------TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHH
T ss_pred HHHHhc------cCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCHHHH
Confidence 888874 799999876543 33333333 33334434445667876543
No 209
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=96.81 E-value=0.011 Score=48.71 Aligned_cols=84 Identities=20% Similarity=0.232 Sum_probs=50.6
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeee-ecCHH----HHHhccccCCCccEE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-MSDLT----MVLGSISQSKARAVV 110 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v-~~dl~----~~l~~~~~~~~~DVv 110 (257)
|||.|+|++|.+|+.+++.+.+ .+.++++...+. .....+. .++.+ .-|+. +.+. .+|+|
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~-~g~~V~~~~R~~---~~~~~~~-----~~~~~~~~D~~d~~~~~~~------~~d~v 65 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKN-RGHEVTAIVRNA---GKITQTH-----KDINILQKDIFDLTLSDLS------DQNVV 65 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEEEESCS---HHHHHHC-----SSSEEEECCGGGCCHHHHT------TCSEE
T ss_pred CeEEEEcCCchhHHHHHHHHHh-CCCEEEEEEcCc---hhhhhcc-----CCCeEEeccccChhhhhhc------CCCEE
Confidence 6899999999999999998875 478888765432 1111111 11211 11221 4453 79999
Q ss_pred EEcCCh---------HhHHHHHHHHHHcC-CCeE
Q 025154 111 IDFTDA---------STVYDNVKQATAFG-MRSV 134 (257)
Q Consensus 111 IDFT~p---------~~~~~~~~~a~~~G-i~vV 134 (257)
|.+..+ ..+...+..|.+.| ..+|
T Consensus 66 i~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v 99 (221)
T 3ew7_A 66 VDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLL 99 (221)
T ss_dssp EECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEE
T ss_pred EECCcCCccccchHHHHHHHHHHHHHhcCCceEE
Confidence 987632 33455666666664 3444
No 210
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=96.80 E-value=0.011 Score=49.88 Aligned_cols=87 Identities=13% Similarity=0.149 Sum_probs=50.5
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeee-------ecCHHHHHhccccCCCc
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-------MSDLTMVLGSISQSKAR 107 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v-------~~dl~~~l~~~~~~~~~ 107 (257)
|++|.|+|++|.+|+.+++.+.+....++++...... ....+. ..++.+ .++++++++ .+
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~---~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~------~~ 89 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPA---KIHKPY----PTNSQIIMGDVLNHAALKQAMQ------GQ 89 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGG---GSCSSC----CTTEEEEECCTTCHHHHHHHHT------TC
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChh---hhcccc----cCCcEEEEecCCCHHHHHHHhc------CC
Confidence 6789999999999999999887543377776543211 111111 112221 123445553 68
Q ss_pred cEEEEcCChH----hHHHHHHHHHHcCCC-eE
Q 025154 108 AVVIDFTDAS----TVYDNVKQATAFGMR-SV 134 (257)
Q Consensus 108 DVvIDFT~p~----~~~~~~~~a~~~Gi~-vV 134 (257)
|+||....+. .+...+..+.+.|+. +|
T Consensus 90 D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV 121 (236)
T 3qvo_A 90 DIVYANLTGEDLDIQANSVIAAMKACDVKRLI 121 (236)
T ss_dssp SEEEEECCSTTHHHHHHHHHHHHHHTTCCEEE
T ss_pred CEEEEcCCCCchhHHHHHHHHHHHHcCCCEEE
Confidence 9988654322 223455666677764 44
No 211
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=96.78 E-value=0.02 Score=54.65 Aligned_cols=121 Identities=12% Similarity=0.119 Sum_probs=67.1
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCC----C------------CCCeeeecCHHHH
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDME----Q------------PLEIPVMSDLTMV 97 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~----~------------~~gv~v~~dl~~~ 97 (257)
+.|||+|+| +|.||..++..++ ..++++++ +|... ..+..+.... . ...+.+++|+++.
T Consensus 7 ~~~~I~VIG-~G~vG~~lA~~la-~~G~~V~~-~d~~~--~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a 81 (478)
T 2y0c_A 7 GSMNLTIIG-SGSVGLVTGACLA-DIGHDVFC-LDVDQ--AKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAA 81 (478)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHH-HTTCEEEE-ECSCH--HHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHH
T ss_pred CCceEEEEC-cCHHHHHHHHHHH-hCCCEEEE-EECCH--HHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHH
Confidence 458999999 5999999998876 45788664 55320 0111111000 0 1135677888877
Q ss_pred HhccccCCCccEEEEcCC-h---------HhHHHHHHHHH---HcCCCeEEeCCCCCHHHHHHHHHHhhh--------cC
Q 025154 98 LGSISQSKARAVVIDFTD-A---------STVYDNVKQAT---AFGMRSVVYVPHIQLETVSALSAFCDK--------AS 156 (257)
Q Consensus 98 l~~~~~~~~~DVvIDFT~-p---------~~~~~~~~~a~---~~Gi~vViGTTG~s~e~~~~L~~~a~~--------~g 156 (257)
+. .+|++|-... | ..+.+.++... +.+.-+|. +++......+++.+..++ ..
T Consensus 82 ~~------~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~-~STv~~gt~~~l~~~l~~~~~~g~~~~~ 154 (478)
T 2y0c_A 82 VA------HGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVD-KSTVPVGTAERVRAAVAEELAKRGGDQM 154 (478)
T ss_dssp HH------HCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEE-CSCCCTTHHHHHHHHHHHHHHHTTCCCC
T ss_pred hh------cCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEE-eCCcCCCchHHHHHHHHHHhcCCCCCcc
Confidence 75 6899887653 3 45555444333 33444444 444333222223222221 12
Q ss_pred ceEEEccCch
Q 025154 157 MGCLIAPTLS 166 (257)
Q Consensus 157 ipvl~spNfS 166 (257)
.+++++|.|.
T Consensus 155 ~~v~~~Pe~~ 164 (478)
T 2y0c_A 155 FSVVSNPEFL 164 (478)
T ss_dssp EEEEECCCCC
T ss_pred EEEEEChhhh
Confidence 5788999876
No 212
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=96.77 E-value=0.014 Score=55.94 Aligned_cols=125 Identities=18% Similarity=0.094 Sum_probs=68.7
Q ss_pred CCCceEEEEcCCChHHHHHHHHHHhcCCc-EEEEEEecCCC--CcchhhhhcCCC------------------CCCeeee
Q 025154 33 QSNIKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDSHSV--GEDIGMVCDMEQ------------------PLEIPVM 91 (257)
Q Consensus 33 ~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~-eLvg~vd~~~~--g~d~g~~~g~~~------------------~~gv~v~ 91 (257)
..+|||+|+| .|.||..++..+++.+++ ++++ +|.... ...+..+..... ...+..+
T Consensus 16 ~~~mkIaVIG-lG~mG~~lA~~la~~~G~~~V~~-~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~t 93 (478)
T 3g79_A 16 GPIKKIGVLG-MGYVGIPAAVLFADAPCFEKVLG-FQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECT 93 (478)
T ss_dssp CSCCEEEEEC-CSTTHHHHHHHHHHSTTCCEEEE-ECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEEC-cCHHHHHHHHHHHHhCCCCeEEE-EECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEe
Confidence 4568999999 599999999988866588 8775 664321 001222211000 1235566
Q ss_pred cCHHHHHhccccCCCccEEEEcC-ChH--------------hHHHHHHHHHHcCCCeEEeCC---CCCHHHHHHHH-HHh
Q 025154 92 SDLTMVLGSISQSKARAVVIDFT-DAS--------------TVYDNVKQATAFGMRSVVYVP---HIQLETVSALS-AFC 152 (257)
Q Consensus 92 ~dl~~~l~~~~~~~~~DVvIDFT-~p~--------------~~~~~~~~a~~~Gi~vViGTT---G~s~e~~~~L~-~~a 152 (257)
+| .+++. ++|++|... +|. ...+.+...++.|.-||..+| |.+.+-.+.+. +..
T Consensus 94 td-~ea~~------~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~~ile~~~ 166 (478)
T 3g79_A 94 PD-FSRIS------ELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAKQILEEES 166 (478)
T ss_dssp SC-GGGGG------GCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHHHHHHHHH
T ss_pred Cc-HHHHh------cCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHHHHHHHhc
Confidence 67 45553 689988653 221 122333444556665555554 44443333332 211
Q ss_pred h-h--cCceEEEccCch
Q 025154 153 D-K--ASMGCLIAPTLS 166 (257)
Q Consensus 153 ~-~--~gipvl~spNfS 166 (257)
. + ....++++|.|-
T Consensus 167 g~~~~~d~~v~~~Pe~~ 183 (478)
T 3g79_A 167 GLKAGEDFALAHAPERV 183 (478)
T ss_dssp CCCBTTTBEEEECCCCC
T ss_pred CCCcCCceeEEeCCccC
Confidence 1 0 126899999874
No 213
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=96.77 E-value=0.01 Score=52.58 Aligned_cols=96 Identities=10% Similarity=0.141 Sum_probs=54.6
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhc-CCcEEEEEEecCCCCcchhhhhcCCCCCCeee-e------cCHHHHHhccccCC
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKA-RGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-M------SDLTMVLGSISQSK 105 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~-~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v-~------~dl~~~l~~~~~~~ 105 (257)
.+|||.|+||+|.+|+.+++.+.+. ..+++++.-.... ......+.......++.+ . ++++++++. .
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~ 97 (346)
T 4egb_A 23 NAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTY-SGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKE----R 97 (346)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCT-TCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHH----H
T ss_pred CCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEecccc-ccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhh----c
Confidence 4689999999999999999998865 3477766543211 111111111100123322 1 234445542 2
Q ss_pred CccEEEEcCCh---H---------------hHHHHHHHHHHcCCC-eE
Q 025154 106 ARAVVIDFTDA---S---------------TVYDNVKQATAFGMR-SV 134 (257)
Q Consensus 106 ~~DVvIDFT~p---~---------------~~~~~~~~a~~~Gi~-vV 134 (257)
++|+||.+..+ . .+...++.|.+.|+. +|
T Consensus 98 ~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v 145 (346)
T 4egb_A 98 DVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLV 145 (346)
T ss_dssp TCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEE
T ss_pred CCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 59999987531 1 135667888888877 44
No 214
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=96.77 E-value=0.0092 Score=53.26 Aligned_cols=33 Identities=24% Similarity=0.130 Sum_probs=27.2
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEe
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (257)
++||.|+||+|.+|+.+++.+.+. +.++.+...
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~-g~~V~~l~R 42 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDA-HRPTYILAR 42 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHT-TCCEEEEEC
T ss_pred CCeEEEECCCcHHHHHHHHHHHHC-CCCEEEEEC
Confidence 579999999999999999998865 578776554
No 215
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=96.74 E-value=0.0099 Score=54.50 Aligned_cols=106 Identities=13% Similarity=0.103 Sum_probs=64.4
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
++||+|+| .|.||..+++.+.. .++++. ++|+.. ....... ..|+..++++++++.+- ...+|+||-..
T Consensus 8 ~~kIgIIG-~G~mG~slA~~L~~-~G~~V~-~~dr~~--~~~~~a~----~~G~~~~~~~~e~~~~a--~~~aDlVilav 76 (341)
T 3ktd_A 8 SRPVCILG-LGLIGGSLLRDLHA-ANHSVF-GYNRSR--SGAKSAV----DEGFDVSADLEATLQRA--AAEDALIVLAV 76 (341)
T ss_dssp SSCEEEEC-CSHHHHHHHHHHHH-TTCCEE-EECSCH--HHHHHHH----HTTCCEESCHHHHHHHH--HHTTCEEEECS
T ss_pred CCEEEEEe-ecHHHHHHHHHHHH-CCCEEE-EEeCCH--HHHHHHH----HcCCeeeCCHHHHHHhc--ccCCCEEEEeC
Confidence 46899999 59999999998875 467765 566531 1111121 34666678888877410 01479999888
Q ss_pred ChHhHHHHHHHHHHcC-CCeEEeCCCCCHHHHHHHHHH
Q 025154 115 DASTVYDNVKQATAFG-MRSVVYVPHIQLETVSALSAF 151 (257)
Q Consensus 115 ~p~~~~~~~~~a~~~G-i~vViGTTG~s~e~~~~L~~~ 151 (257)
.+....+.+....... -.+|+=+++...+-.+.+++.
T Consensus 77 P~~~~~~vl~~l~~~~~~~iv~Dv~Svk~~i~~~~~~~ 114 (341)
T 3ktd_A 77 PMTAIDSLLDAVHTHAPNNGFTDVVSVKTAVYDAVKAR 114 (341)
T ss_dssp CHHHHHHHHHHHHHHCTTCCEEECCSCSHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHccCCCCEEEEcCCCChHHHHHHHHh
Confidence 8776666665443332 134544555555444555543
No 216
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=96.70 E-value=0.0071 Score=50.12 Aligned_cols=32 Identities=28% Similarity=0.446 Sum_probs=27.3
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEe
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (257)
|||.|+|++|.+|+.+++.+.+. +.++++...
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~-g~~V~~~~R 32 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRR-GHEVLAVVR 32 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEES
T ss_pred CEEEEEcCCCHHHHHHHHHHHHC-CCEEEEEEe
Confidence 68999999999999999998764 788887653
No 217
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=96.70 E-value=0.003 Score=58.08 Aligned_cols=98 Identities=24% Similarity=0.288 Sum_probs=61.5
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecC-------------CCCcchhhhhcCC-----CCCCeeee--cCH
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH-------------SVGEDIGMVCDME-----QPLEIPVM--SDL 94 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~-------------~~g~d~g~~~g~~-----~~~gv~v~--~dl 94 (257)
++||+|.| .||+||.+.|++.+.+++++|++-|.. --|+--+++.-.+ ....+.++ .|+
T Consensus 4 ~~kv~ING-fGrIGr~v~R~~~~~~~~~ivaind~~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~inGk~I~v~~e~dp 82 (338)
T 3lvf_P 4 AVKVAING-FGRIGRLAFRRIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVKSFSEPDA 82 (338)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSCG
T ss_pred cEEEEEEC-CCcHHHHHHHHHHHCCCceEEEEecCCCHHHHHHHhccCCCCCCcCCeEEEcCCEEEECCEEEEEEEeccc
Confidence 47999999 599999999999888899999987621 0011111110000 00123443 455
Q ss_pred HHHHhccccCCCccEEEEcCChHhHHHHHHHHHHcCCC-eEEe
Q 025154 95 TMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVVY 136 (257)
Q Consensus 95 ~~~l~~~~~~~~~DVvIDFT~p~~~~~~~~~a~~~Gi~-vViG 136 (257)
+++-= .+.++|++++.|-.....+.+...++.|.. |||-
T Consensus 83 ~~i~w---~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIS 122 (338)
T 3lvf_P 83 SKLPW---KDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLIS 122 (338)
T ss_dssp GGSCT---TTTTCSEEEECSSSCCBHHHHHHHHHTTCSEEEES
T ss_pred ccCCc---cccCCCEEEEccCCcCCHHHHHHHHHcCCCEEEEC
Confidence 54311 013789999877666777888888888875 4443
No 218
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=96.67 E-value=0.0028 Score=58.30 Aligned_cols=97 Identities=18% Similarity=0.173 Sum_probs=59.2
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecC--------------CCCcchh-hhhcCCC------CCCeeee--
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH--------------SVGEDIG-MVCDMEQ------PLEIPVM-- 91 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~--------------~~g~d~g-~~~g~~~------~~gv~v~-- 91 (257)
|+||+|.| .||+||.+.|++.+.+++++|++-|+. --|+--+ ++.-..+ ...+.++
T Consensus 3 ~~kv~ING-fGrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~~~~v~~~~~~~l~i~Gk~I~v~~e 81 (337)
T 3v1y_O 3 KIKIGING-FGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFGI 81 (337)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTCSSEEEEEEECTTSCHHHHHHHHHCCTTTCCCCSSCEEEEETTEEEETTEEEEEECC
T ss_pred ceEEEEEC-CChHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhhhccCCCcccCceEEEcCCcEEEECCEEEEEEEe
Confidence 68999999 599999999999888899999987741 0011111 1000000 0113333
Q ss_pred cCHHHHH-hccccCCCccEEEEcCChHhHHHHHHHHHHcCCC-eEEe
Q 025154 92 SDLTMVL-GSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVVY 136 (257)
Q Consensus 92 ~dl~~~l-~~~~~~~~~DVvIDFT~p~~~~~~~~~a~~~Gi~-vViG 136 (257)
.|++++- .+ .++|++++.|-.....+.+...++.|.. |||-
T Consensus 82 ~dp~~i~w~~----~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIs 124 (337)
T 3v1y_O 82 RNPDEIPWAE----AGAEYVVESTGVFTDKEKAAAHLKGGAKKVVIS 124 (337)
T ss_dssp SSGGGCCHHH----HTCCEEEECSSSCCSHHHHTHHHHTTCCEEEES
T ss_pred cCcccCCccc----cCCcEEEEeccccCCHHHHHHHHHcCCCEEEEC
Confidence 3443321 00 2688888877666667777778888865 4443
No 219
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=96.66 E-value=0.02 Score=43.86 Aligned_cols=126 Identities=17% Similarity=0.177 Sum_probs=71.8
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCee-ee---cCHHHHHhccccCCCccEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIP-VM---SDLTMVLGSISQSKARAVV 110 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~-v~---~dl~~~l~~~~~~~~~DVv 110 (257)
|.+|+|+|+ |.+|+.+++.+.. .+.+++ ++|+.. .....+. ..+.. +. .+.+.+.+. .-.++|++
T Consensus 6 ~~~v~I~G~-G~iG~~~a~~l~~-~g~~v~-~~d~~~--~~~~~~~----~~~~~~~~~d~~~~~~l~~~--~~~~~d~v 74 (144)
T 2hmt_A 6 NKQFAVIGL-GRFGGSIVKELHR-MGHEVL-AVDINE--EKVNAYA----SYATHAVIANATEENELLSL--GIRNFEYV 74 (144)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHH-TTCCCE-EEESCH--HHHHTTT----TTCSEEEECCTTCHHHHHTT--TGGGCSEE
T ss_pred CCcEEEECC-CHHHHHHHHHHHH-CCCEEE-EEeCCH--HHHHHHH----HhCCEEEEeCCCCHHHHHhc--CCCCCCEE
Confidence 457999996 9999999998875 466755 455421 1111111 11222 22 233332210 00368999
Q ss_pred EEcCCh--HhHHHHHHHHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCchHHHHHHHHHH
Q 025154 111 IDFTDA--STVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAA 176 (257)
Q Consensus 111 IDFT~p--~~~~~~~~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfSlGvnll~~~a 176 (257)
|..+.. +.....+..+.+.+.+-++... -+.+..+.++ +.|+..++.|....+-.+...+.
T Consensus 75 i~~~~~~~~~~~~~~~~~~~~~~~~ii~~~-~~~~~~~~l~----~~g~~~vi~p~~~~~~~l~~~~~ 137 (144)
T 2hmt_A 75 IVAIGANIQASTLTTLLLKELDIPNIWVKA-QNYYHHKVLE----KIGADRIIHPEKDMGVKIAQSLS 137 (144)
T ss_dssp EECCCSCHHHHHHHHHHHHHTTCSEEEEEC-CSHHHHHHHH----HHTCSEEECHHHHHHHHHHHHHH
T ss_pred EECCCCchHHHHHHHHHHHHcCCCeEEEEe-CCHHHHHHHH----HcCCCEEECccHHHHHHHHHHHh
Confidence 988753 3344566667777876555433 1233333343 35678888998888776665554
No 220
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=96.66 E-value=0.002 Score=59.50 Aligned_cols=100 Identities=21% Similarity=0.195 Sum_probs=62.0
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCC-------------CCcchhhhhcCC-----CCCCeeee--cC
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS-------------VGEDIGMVCDME-----QPLEIPVM--SD 93 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~-------------~g~d~g~~~g~~-----~~~gv~v~--~d 93 (257)
.|+||+|.| .||+||.+.|++.+.+++++|++-|+.. -|+--+++.-.+ ....+.++ .|
T Consensus 3 ~~~kv~ING-fGrIGr~v~Ra~~~~~~~~ivaINd~~d~~~~a~llkyDS~hG~f~~~v~~~~~~l~inGk~I~v~~e~d 81 (345)
T 4dib_A 3 AMTRVAING-FGRIGRMVFRQAIKESAFEIVAINASYPSETLAHLIKYDTVHGKFDGTVEAFEDHLLVDGKMIRLLNNRD 81 (345)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHTTCSSSEEEEEECSSCHHHHHHHHHEETTTEECSSCEEECSSEEEETTEEEEEECCSC
T ss_pred ccEEEEEEC-CCcHHHHHHHHHHhCCCceEEEEcCCCCHHHHHHHhcccCCCCCCCCcEEEcCCEEEECCEEEEEeecCC
Confidence 379999999 5999999999988888999999877410 011001110000 00123443 34
Q ss_pred HHHHHhccccCCCccEEEEcCChHhHHHHHHHHHHcCCC-eEEeC
Q 025154 94 LTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVVYV 137 (257)
Q Consensus 94 l~~~l~~~~~~~~~DVvIDFT~p~~~~~~~~~a~~~Gi~-vViGT 137 (257)
++++-= .+.++|++++.|--....+.+...++.|.. |||-.
T Consensus 82 p~~i~w---~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISa 123 (345)
T 4dib_A 82 PKELPW---TDLGVEVVIEATGKFNSKEKAILHVEAGAKKVILTA 123 (345)
T ss_dssp GGGSCT---TTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESS
T ss_pred hhhCCc---cccCccEEEEeccCcCCHHHHHHHHHCCCCEEEECC
Confidence 554311 013789999877666677888888888875 44433
No 221
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=96.65 E-value=0.0014 Score=51.68 Aligned_cols=67 Identities=10% Similarity=0.192 Sum_probs=46.5
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCC--eeeecCHHHHHhccccCCCccEEEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLE--IPVMSDLTMVLGSISQSKARAVVID 112 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~g--v~v~~dl~~~l~~~~~~~~~DVvID 112 (257)
..||+|+|+ |.||+.+++.+.. .+++ +.++++.. ..+..++. .++ +..++++++++. ++|+||.
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~-~g~~-v~v~~r~~--~~~~~~a~---~~~~~~~~~~~~~~~~~------~~Divi~ 86 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSY-PQYK-VTVAGRNI--DHVRAFAE---KYEYEYVLINDIDSLIK------NNDVIIT 86 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCT-TTCE-EEEEESCH--HHHHHHHH---HHTCEEEECSCHHHHHH------TCSEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHh-CCCE-EEEEcCCH--HHHHHHHH---HhCCceEeecCHHHHhc------CCCEEEE
Confidence 458999995 9999999998765 6888 77888641 11222221 122 335678888885 7999998
Q ss_pred cCC
Q 025154 113 FTD 115 (257)
Q Consensus 113 FT~ 115 (257)
.|.
T Consensus 87 at~ 89 (144)
T 3oj0_A 87 ATS 89 (144)
T ss_dssp CSC
T ss_pred eCC
Confidence 875
No 222
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=96.64 E-value=0.0052 Score=53.81 Aligned_cols=99 Identities=16% Similarity=0.190 Sum_probs=54.1
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhh--cCC--C-----CCCeeeecCHHHHHhccccCC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVC--DME--Q-----PLEIPVMSDLTMVLGSISQSK 105 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~--g~~--~-----~~gv~v~~dl~~~l~~~~~~~ 105 (257)
||||+|+|+ |.||+.++..+.+ .++++.. +++.. .....+. +.. . ...+.++ +.+++.+.+ .
T Consensus 3 ~m~i~iiG~-G~~G~~~a~~l~~-~g~~V~~-~~r~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~---~ 73 (316)
T 2ew2_A 3 AMKIAIAGA-GAMGSRLGIMLHQ-GGNDVTL-IDQWP--AHIEAIRKNGLIADFNGEEVVANLPIF-SPEEIDHQN---E 73 (316)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHH-TTCEEEE-ECSCH--HHHHHHHHHCEEEEETTEEEEECCCEE-CGGGCCTTS---C
T ss_pred CCeEEEECc-CHHHHHHHHHHHh-CCCcEEE-EECCH--HHHHHHHhCCEEEEeCCCeeEecceee-cchhhcccC---C
Confidence 689999995 9999999998874 5677654 55421 1111111 000 0 0011112 222322100 2
Q ss_pred CccEEEEcCChHhHHHHHHHHHH---cCCCeEEeCCCCCH
Q 025154 106 ARAVVIDFTDASTVYDNVKQATA---FGMRSVVYVPHIQL 142 (257)
Q Consensus 106 ~~DVvIDFT~p~~~~~~~~~a~~---~Gi~vViGTTG~s~ 142 (257)
++|+||-.+.+....+.+..... .+..+|.-++|++.
T Consensus 74 ~~d~vi~~v~~~~~~~v~~~l~~~l~~~~~iv~~~~g~~~ 113 (316)
T 2ew2_A 74 QVDLIIALTKAQQLDAMFKAIQPMITEKTYVLCLLNGLGH 113 (316)
T ss_dssp CCSEEEECSCHHHHHHHHHHHGGGCCTTCEEEECCSSSCT
T ss_pred CCCEEEEEeccccHHHHHHHHHHhcCCCCEEEEecCCCCc
Confidence 68999987777766665554433 35556666678864
No 223
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=96.64 E-value=0.0055 Score=52.80 Aligned_cols=120 Identities=11% Similarity=0.126 Sum_probs=69.9
Q ss_pred ceEEEEcCCChHHHHHHHHHHhc-CCcEEEEEEecCCCCcchhhhhcCCCCCCeee----ecC---HHHHHhccccCCCc
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKA-RGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV----MSD---LTMVLGSISQSKAR 107 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~-~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v----~~d---l~~~l~~~~~~~~~ 107 (257)
++|.|+|++|.+|+.+++.+.+. ++.++++...+.. ....+.. .++.+ ..| ++++++ ++
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~---~~~~l~~----~~~~~~~~D~~d~~~l~~~~~------~~ 67 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVE---KASTLAD----QGVEVRHGDYNQPESLQKAFA------GV 67 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTT---TTHHHHH----TTCEEEECCTTCHHHHHHHTT------TC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHH---HHhHHhh----cCCeEEEeccCCHHHHHHHHh------cC
Confidence 47999999999999999988765 4788887553321 1111110 12211 123 344453 69
Q ss_pred cEEEEcCCh--------HhHHHHHHHHHHcCC-CeE-EeCCCC------CHHHHHHHHHHhhhcCceEE-EccCchHH
Q 025154 108 AVVIDFTDA--------STVYDNVKQATAFGM-RSV-VYVPHI------QLETVSALSAFCDKASMGCL-IAPTLSIG 168 (257)
Q Consensus 108 DVvIDFT~p--------~~~~~~~~~a~~~Gi-~vV-iGTTG~------s~e~~~~L~~~a~~~gipvl-~spNfSlG 168 (257)
|+||.+..+ ......++.|.+.|+ ++| +++.+- -.......+++.++.|+++. +-|++=.|
T Consensus 68 d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~y~~~K~~~E~~~~~~~~~~~ilrp~~~~~ 145 (287)
T 2jl1_A 68 SKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAFAEESIIPLAHVHLATEYAIRTTNIPYTFLRNALYTD 145 (287)
T ss_dssp SEEEECCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGCCSTHHHHHHHHHHHHHHTTCCEEEEEECCBHH
T ss_pred CEEEEcCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCCCCchHHHHHHHHHHHHHcCCCeEEEECCEecc
Confidence 999988642 244566778888887 444 333221 11223345666666677655 45555444
No 224
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=96.63 E-value=0.0026 Score=55.11 Aligned_cols=85 Identities=21% Similarity=0.270 Sum_probs=53.0
Q ss_pred CCCCCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEE
Q 025154 31 PPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVV 110 (257)
Q Consensus 31 ~~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVv 110 (257)
|++..+||.|+|++|.+|+.+++.+.+ .+.++++. ++.. + |+. -.++++++++. ..+|+|
T Consensus 8 ~~~~~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~-~r~~-~-Dl~------------d~~~~~~~~~~----~~~d~v 67 (292)
T 1vl0_A 8 HHHHHMKILITGANGQLGREIQKQLKG-KNVEVIPT-DVQD-L-DIT------------NVLAVNKFFNE----KKPNVV 67 (292)
T ss_dssp ----CEEEEEESTTSHHHHHHHHHHTT-SSEEEEEE-CTTT-C-CTT------------CHHHHHHHHHH----HCCSEE
T ss_pred cccccceEEEECCCChHHHHHHHHHHh-CCCeEEec-cCcc-C-CCC------------CHHHHHHHHHh----cCCCEE
Confidence 566789999999999999999998875 57887764 4321 1 111 12234555641 268999
Q ss_pred EEcCCh---H---------------hHHHHHHHHHHcCCCeEE
Q 025154 111 IDFTDA---S---------------TVYDNVKQATAFGMRSVV 135 (257)
Q Consensus 111 IDFT~p---~---------------~~~~~~~~a~~~Gi~vVi 135 (257)
|.+... . .....++.|.+.|+.+|.
T Consensus 68 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~iv~ 110 (292)
T 1vl0_A 68 INCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQ 110 (292)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEE
T ss_pred EECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 987531 1 134566777787877663
No 225
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.63 E-value=0.0051 Score=53.66 Aligned_cols=33 Identities=27% Similarity=0.315 Sum_probs=25.3
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH 70 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~ 70 (257)
.||+|+|+ |.+|..+++.+... ++.=+.++|..
T Consensus 32 ~~VlVvG~-Gg~G~~va~~La~~-Gv~~i~lvD~d 64 (249)
T 1jw9_B 32 SRVLIVGL-GGLGCAASQYLASA-GVGNLTLLDFD 64 (249)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHH-TCSEEEEECCC
T ss_pred CeEEEEee-CHHHHHHHHHHHHc-CCCeEEEEcCC
Confidence 58999996 99999999988754 66444567743
No 226
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=96.61 E-value=0.0079 Score=51.65 Aligned_cols=118 Identities=12% Similarity=0.159 Sum_probs=68.2
Q ss_pred eEEEEcCCChHHHHHHHHHHhc-CCcEEEEEEecCCCCcchhhhhcCCCCCCeee----e---cCHHHHHhccccCCCcc
Q 025154 37 KVIINGAVKEIGRAAVIAVTKA-RGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV----M---SDLTMVLGSISQSKARA 108 (257)
Q Consensus 37 kV~V~Ga~GrMG~~i~~~i~~~-~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v----~---~dl~~~l~~~~~~~~~D 108 (257)
||.|+|++|.+|+.+++.+.+. ++.++++...... ....+.. .++.+ . ++++++++ ++|
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~---~~~~~~~----~~~~~~~~D~~d~~~~~~~~~------~~d 67 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPA---KAQALAA----QGITVRQADYGDEAALTSALQ------GVE 67 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTT---TCHHHHH----TTCEEEECCTTCHHHHHHHTT------TCS
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChH---hhhhhhc----CCCeEEEcCCCCHHHHHHHHh------CCC
Confidence 5899999999999999988765 4788887553221 1111110 12211 1 23344553 689
Q ss_pred EEEEcCCh------HhHHHHHHHHHHcCCC-eE-EeCCCC------CHHHHHHHHHHhhhcCceEE-EccCchH
Q 025154 109 VVIDFTDA------STVYDNVKQATAFGMR-SV-VYVPHI------QLETVSALSAFCDKASMGCL-IAPTLSI 167 (257)
Q Consensus 109 VvIDFT~p------~~~~~~~~~a~~~Gi~-vV-iGTTG~------s~e~~~~L~~~a~~~gipvl-~spNfSl 167 (257)
+||....+ ..+...++.|.+.|+. +| +++.+- -.......+++.++.|+++. +-|++=.
T Consensus 68 ~vi~~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~y~~sK~~~e~~~~~~~~~~~ilrp~~~~ 141 (286)
T 2zcu_A 68 KLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLHADTSPLGLADEHIETEKMLADSGIVYTLLRNGWYS 141 (286)
T ss_dssp EEEECC--------CHHHHHHHHHHHHTCCEEEEEEETTTTTCCSTTHHHHHHHHHHHHHHCSEEEEEEECCBH
T ss_pred EEEEeCCCCchHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCCcchhHHHHHHHHHHHHHcCCCeEEEeChHHh
Confidence 99987643 3456677788888864 44 333221 12233456666666677755 4566533
No 227
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=96.55 E-value=0.0041 Score=57.16 Aligned_cols=100 Identities=20% Similarity=0.190 Sum_probs=61.0
Q ss_pred CceEEEEcCCChHHHHHHHHHHhc--CCcEEEEEEecCC-------------CCcchhhhhcCC-----CCCCeeee--c
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKA--RGMEVAGAIDSHS-------------VGEDIGMVCDME-----QPLEIPVM--S 92 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~--~~~eLvg~vd~~~-------------~g~d~g~~~g~~-----~~~gv~v~--~ 92 (257)
++||+|.| .||+||.+.|++.+. +++++|++-|+.. -|+--+++.-.+ ....+.++ .
T Consensus 2 ~~kv~ING-fGrIGr~v~Ra~~~~~~~~~~ivaiNd~~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~i~Gk~I~v~~e~ 80 (335)
T 3doc_A 2 AVRVAING-FGRIGRNILRAIVESGRTDIQVVAINDLGPVETNAHLLRYDSVHGRFPKEVEVAGDTIDVGYGPIKVHAVR 80 (335)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHHTTCCSEEEEEEECSSCHHHHHHHHHEETTTEECSSCCEECSSEEESSSSEEEEECCS
T ss_pred CEEEEEEC-CCcHHHHHHHHHHhccCCCeEEEEEeCCCCHHHHHHHhcccCCCCCCCCeEEEecCEEEECCEEEEEEeec
Confidence 58999999 599999999998876 6899999877410 011111110000 01124443 2
Q ss_pred CHHHHHhccccCCCccEEEEcCChHhHHHHHHHHHHcCCC-eEEeCC
Q 025154 93 DLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVVYVP 138 (257)
Q Consensus 93 dl~~~l~~~~~~~~~DVvIDFT~p~~~~~~~~~a~~~Gi~-vViGTT 138 (257)
|++++-= .+.++|++++.|--....+.+...++.|.. |||-.+
T Consensus 81 dp~~i~w---~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsap 124 (335)
T 3doc_A 81 NPAELPW---KEENVDIALECTGIFTSRDKAALHLEAGAKRVIVSAP 124 (335)
T ss_dssp STTSSCT---TTTTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSC
T ss_pred ccccccc---cccCCCEEEEccCccCCHHHHHHHHHcCCCEEEECCC
Confidence 4443210 013789999877666677888888888865 444333
No 228
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=96.54 E-value=0.0043 Score=55.82 Aligned_cols=87 Identities=15% Similarity=0.075 Sum_probs=57.4
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCC--eeeecCHHHHHhccccCCCccEEEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLE--IPVMSDLTMVLGSISQSKARAVVID 112 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~g--v~v~~dl~~~l~~~~~~~~~DVvID 112 (257)
.++|+|+|+ |.||+.+++.+....+++-+.++|+.. ..+..+.. ..+ +.++++++++++ .+|+||-
T Consensus 135 ~~~igiIG~-G~~g~~~a~~l~~~~g~~~V~v~dr~~--~~~~~l~~---~~~~~~~~~~~~~e~v~------~aDiVi~ 202 (312)
T 2i99_A 135 SEVLCILGA-GVQAYSHYEIFTEQFSFKEVRIWNRTK--ENAEKFAD---TVQGEVRVCSSVQEAVA------GADVIIT 202 (312)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHCCCSEEEEECSSH--HHHHHHHH---HSSSCCEECSSHHHHHT------TCSEEEE
T ss_pred CcEEEEECC-cHHHHHHHHHHHHhCCCcEEEEEcCCH--HHHHHHHH---HhhCCeEEeCCHHHHHh------cCCEEEE
Confidence 469999995 999999999988765676677787541 11222321 223 667789999885 6999987
Q ss_pred cCChHhHHHHHH-HHHHcCCCeEE
Q 025154 113 FTDASTVYDNVK-QATAFGMRSVV 135 (257)
Q Consensus 113 FT~p~~~~~~~~-~a~~~Gi~vVi 135 (257)
.|. .. .+.+. ..++.|..++.
T Consensus 203 atp-~~-~~v~~~~~l~~g~~vi~ 224 (312)
T 2i99_A 203 VTL-AT-EPILFGEWVKPGAHINA 224 (312)
T ss_dssp CCC-CS-SCCBCGGGSCTTCEEEE
T ss_pred EeC-CC-CcccCHHHcCCCcEEEe
Confidence 763 21 22221 35567877665
No 229
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=96.50 E-value=0.03 Score=52.05 Aligned_cols=115 Identities=14% Similarity=0.157 Sum_probs=64.5
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCC--------------CCCeeeecCHHHHHhcc
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQ--------------PLEIPVMSDLTMVLGSI 101 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~--------------~~gv~v~~dl~~~l~~~ 101 (257)
|||+|+|+ |.||..++..+.+ ++++++ +|... ..+..+...+. ...+..++++++.+.
T Consensus 1 MkI~VIG~-G~vG~~~A~~La~--G~~V~~-~d~~~--~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~-- 72 (402)
T 1dlj_A 1 MKIAVAGS-GYVGLSLGVLLSL--QNEVTI-VDILP--SKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYK-- 72 (402)
T ss_dssp CEEEEECC-SHHHHHHHHHHTT--TSEEEE-ECSCH--HHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHH--
T ss_pred CEEEEECC-CHHHHHHHHHHhC--CCEEEE-EECCH--HHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhc--
Confidence 58999995 9999999988775 788665 56420 11111110000 113456778877775
Q ss_pred ccCCCccEEEEcCChH-----------hHHHHHHHH--HHcCCCeEE-eCCCCCHHHHHHHHHHhhhcCceEEEccCch
Q 025154 102 SQSKARAVVIDFTDAS-----------TVYDNVKQA--TAFGMRSVV-YVPHIQLETVSALSAFCDKASMGCLIAPTLS 166 (257)
Q Consensus 102 ~~~~~~DVvIDFT~p~-----------~~~~~~~~a--~~~Gi~vVi-GTTG~s~e~~~~L~~~a~~~gipvl~spNfS 166 (257)
.+|++|-...+. .+.+.++.. +..|.-+|. .|.+... .+++.+...+ -+++++|-|.
T Consensus 73 ----~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~l~~~~iVV~~ST~~~g~--~~~l~~~~~~--~~v~~~Pe~~ 143 (402)
T 1dlj_A 73 ----EAELVIIATPTNYNSRINYFDTQHVETVIKEVLSVNSHATLIIKSTIPIGF--ITEMRQKFQT--DRIIFSPEFL 143 (402)
T ss_dssp ----HCSEEEECCCCCEETTTTEECCHHHHHHHHHHHHHCSSCEEEECSCCCTTH--HHHHHHHTTC--SCEEECCCCC
T ss_pred ----CCCEEEEecCCCcccCCCCccHHHHHHHHHHHHhhCCCCEEEEeCCCCccH--HHHHHHHhCC--CeEEECCccc
Confidence 689988776433 243333322 344544554 3444432 3345555444 2777777653
No 230
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=96.49 E-value=0.0035 Score=55.87 Aligned_cols=116 Identities=12% Similarity=0.112 Sum_probs=68.2
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeee--ecCHHHHHhccccCCCccEEEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV--MSDLTMVLGSISQSKARAVVID 112 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v--~~dl~~~l~~~~~~~~~DVvID 112 (257)
..+|+|+|+ |+||+.+++.+.. -++++. ++|+.. .....+. +.|+.+ +.++++++. .+|+||.
T Consensus 157 g~~v~IiG~-G~iG~~~a~~l~~-~G~~V~-~~d~~~--~~~~~~~----~~g~~~~~~~~l~~~l~------~aDvVi~ 221 (300)
T 2rir_A 157 GSQVAVLGL-GRTGMTIARTFAA-LGANVK-VGARSS--AHLARIT----EMGLVPFHTDELKEHVK------DIDICIN 221 (300)
T ss_dssp TSEEEEECC-SHHHHHHHHHHHH-TTCEEE-EEESSH--HHHHHHH----HTTCEEEEGGGHHHHST------TCSEEEE
T ss_pred CCEEEEEcc-cHHHHHHHHHHHH-CCCEEE-EEECCH--HHHHHHH----HCCCeEEchhhHHHHhh------CCCEEEE
Confidence 468999995 9999999998764 577765 466531 1111111 123332 357888774 7999998
Q ss_pred cCChHhHHHHHHHHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCchHHH
Q 025154 113 FTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGS 169 (257)
Q Consensus 113 FT~p~~~~~~~~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfSlGv 169 (257)
.+.+....+.....++.|.-+|--..|-.. .+ + +.+++.|+.++..||++-++
T Consensus 222 ~~p~~~i~~~~~~~mk~g~~lin~a~g~~~--~~-~-~~a~~~G~~~i~~pg~~g~v 274 (300)
T 2rir_A 222 TIPSMILNQTVLSSMTPKTLILDLASRPGG--TD-F-KYAEKQGIKALLAPGLPGIV 274 (300)
T ss_dssp CCSSCCBCHHHHTTSCTTCEEEECSSTTCS--BC-H-HHHHHHTCEEEECCCHHHHH
T ss_pred CCChhhhCHHHHHhCCCCCEEEEEeCCCCC--cC-H-HHHHHCCCEEEECCCCCCcH
Confidence 876533222222223444333322222111 11 3 45566788888999999877
No 231
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=96.49 E-value=0.0075 Score=53.57 Aligned_cols=44 Identities=14% Similarity=0.132 Sum_probs=27.6
Q ss_pred CccccccCCCCCCCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEE
Q 025154 22 KRFISCSTNPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (257)
Q Consensus 22 ~~~~~~~~~~~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (257)
+-+.....++. .++||.|+|++|.+|+.+++.+.+ .+.++++..
T Consensus 15 ~~~~~~~~~~~-~~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~ 58 (343)
T 2b69_A 15 ENLYFQGHMEK-DRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVD 58 (343)
T ss_dssp -------------CCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEE
T ss_pred ccccccccccc-CCCEEEEEcCccHHHHHHHHHHHH-CCCEEEEEe
Confidence 33444444333 467999999999999999998875 478887654
No 232
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=96.43 E-value=0.013 Score=51.71 Aligned_cols=33 Identities=21% Similarity=0.270 Sum_probs=27.9
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEe
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (257)
+|||.|+|++|.+|+.+++.+.+ .+.++++...
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~r 45 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRA-AGHDLVLIHR 45 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHH-TTCEEEEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHH-CCCEEEEEec
Confidence 56999999999999999998875 4788887553
No 233
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=96.43 E-value=0.0029 Score=54.68 Aligned_cols=80 Identities=16% Similarity=0.196 Sum_probs=52.6
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcCC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT~ 115 (257)
|||.|+|++|.+|+.+++.+.+ .+.++++.. +.. -| +.-.++++++++. .++|+||.+..
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~-r~~--~D------------~~d~~~~~~~~~~----~~~d~vi~~a~ 65 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNP-EEYDIYPFD-KKL--LD------------ITNISQVQQVVQE----IRPHIIIHCAA 65 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCT-TTEEEEEEC-TTT--SC------------TTCHHHHHHHHHH----HCCSEEEECCC
T ss_pred eEEEEECCCCHHHHHHHHHHHh-CCCEEEEec-ccc--cC------------CCCHHHHHHHHHh----cCCCEEEECCc
Confidence 5999999999999999998765 478877643 311 11 1112344556642 26999998752
Q ss_pred ---hH---------------hHHHHHHHHHHcCCCeEE
Q 025154 116 ---AS---------------TVYDNVKQATAFGMRSVV 135 (257)
Q Consensus 116 ---p~---------------~~~~~~~~a~~~Gi~vVi 135 (257)
+. .+...++.|.+.|+.+|.
T Consensus 66 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~ 103 (287)
T 3sc6_A 66 YTKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLVY 103 (287)
T ss_dssp CCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTCEEEE
T ss_pred ccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 11 134567888888887763
No 234
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=96.40 E-value=0.0068 Score=54.86 Aligned_cols=34 Identities=21% Similarity=0.231 Sum_probs=28.2
Q ss_pred CCCceEEEEcCCChHHHHHHHHHHhcCC-cEEEEEE
Q 025154 33 QSNIKVIINGAVKEIGRAAVIAVTKARG-MEVAGAI 67 (257)
Q Consensus 33 ~~~ikV~V~Ga~GrMG~~i~~~i~~~~~-~eLvg~v 67 (257)
-.||+|.|+|++|.+|+.+++.+.+. + .++++..
T Consensus 30 ~~~~~ilVtGatG~iG~~l~~~L~~~-g~~~V~~~~ 64 (377)
T 2q1s_A 30 LANTNVMVVGGAGFVGSNLVKRLLEL-GVNQVHVVD 64 (377)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHT-TCSEEEEEC
T ss_pred hCCCEEEEECCccHHHHHHHHHHHHc-CCceEEEEE
Confidence 34679999999999999999998864 6 8887653
No 235
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=96.40 E-value=0.011 Score=51.81 Aligned_cols=121 Identities=14% Similarity=0.152 Sum_probs=71.2
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcc--hhhhhcCCCCCCeee----ecC---HHHHHhccccCCC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGED--IGMVCDMEQPLEIPV----MSD---LTMVLGSISQSKA 106 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d--~g~~~g~~~~~gv~v----~~d---l~~~l~~~~~~~~ 106 (257)
.||.|+|++|.+|+.+++.+.+. +.++.+...... ... ...+. ..++.+ .+| +.++++ +
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l~R~~~-~~~~~~~~l~----~~~v~~v~~Dl~d~~~l~~a~~------~ 79 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKL-GHPTYVFTRPNS-SKTTLLDEFQ----SLGAIIVKGELDEHEKLVELMK------K 79 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHT-TCCEEEEECTTC-SCHHHHHHHH----HTTCEEEECCTTCHHHHHHHHT------T
T ss_pred CeEEEECCCchHHHHHHHHHHHC-CCcEEEEECCCC-chhhHHHHhh----cCCCEEEEecCCCHHHHHHHHc------C
Confidence 48999999999999999998864 678776543321 110 11111 112322 123 444553 7
Q ss_pred ccEEEEcCCh---HhHHHHHHHHHHcC-CCeEEeCC-CCC--------H-----HHHHHHHHHhhhcCceEE-EccCchH
Q 025154 107 RAVVIDFTDA---STVYDNVKQATAFG-MRSVVYVP-HIQ--------L-----ETVSALSAFCDKASMGCL-IAPTLSI 167 (257)
Q Consensus 107 ~DVvIDFT~p---~~~~~~~~~a~~~G-i~vViGTT-G~s--------~-----e~~~~L~~~a~~~gipvl-~spNfSl 167 (257)
+|+||..+.+ ......+..|.+.| +.-++-++ |.+ + .....++++.++.++++. +.||+=.
T Consensus 80 ~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~lr~~~~~ 159 (318)
T 2r6j_A 80 VDVVISALAFPQILDQFKILEAIKVAGNIKRFLPSDFGVEEDRINALPPFEALIERKRMIRRAIEEANIPYTYVSANCFA 159 (318)
T ss_dssp CSEEEECCCGGGSTTHHHHHHHHHHHCCCCEEECSCCSSCTTTCCCCHHHHHHHHHHHHHHHHHHHTTCCBEEEECCEEH
T ss_pred CCEEEECCchhhhHHHHHHHHHHHhcCCCCEEEeeccccCcccccCCCCcchhHHHHHHHHHHHHhcCCCeEEEEcceeh
Confidence 9999988753 44567778888888 66555322 311 1 112346666676676654 5566544
Q ss_pred H
Q 025154 168 G 168 (257)
Q Consensus 168 G 168 (257)
+
T Consensus 160 ~ 160 (318)
T 2r6j_A 160 S 160 (318)
T ss_dssp H
T ss_pred h
Confidence 4
No 236
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=96.40 E-value=0.0099 Score=53.99 Aligned_cols=91 Identities=18% Similarity=0.155 Sum_probs=57.1
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
++||+|+| +|.||+.+++.+.. .+++++ ++++.. ....+.+ ...|+.++ ++++++. .+|+||-.+
T Consensus 16 ~~~I~IIG-~G~mG~alA~~L~~-~G~~V~-~~~~~~--~~~~~~a---~~~G~~~~-~~~e~~~------~aDvVilav 80 (338)
T 1np3_A 16 GKKVAIIG-YGSQGHAHACNLKD-SGVDVT-VGLRSG--SATVAKA---EAHGLKVA-DVKTAVA------AADVVMILT 80 (338)
T ss_dssp TSCEEEEC-CSHHHHHHHHHHHH-TTCCEE-EECCTT--CHHHHHH---HHTTCEEE-CHHHHHH------TCSEEEECS
T ss_pred CCEEEEEC-chHHHHHHHHHHHH-CcCEEE-EEECCh--HHHHHHH---HHCCCEEc-cHHHHHh------cCCEEEEeC
Confidence 46899999 59999999998875 567765 455431 1111111 12455556 8888875 799999888
Q ss_pred ChHhHHHHHH-HH---HHcCCCeEEeCCCCC
Q 025154 115 DASTVYDNVK-QA---TAFGMRSVVYVPHIQ 141 (257)
Q Consensus 115 ~p~~~~~~~~-~a---~~~Gi~vViGTTG~s 141 (257)
.+....+.+. .. ++.|. +|+-++|++
T Consensus 81 p~~~~~~v~~~~i~~~l~~~~-ivi~~~gv~ 110 (338)
T 1np3_A 81 PDEFQGRLYKEEIEPNLKKGA-TLAFAHGFS 110 (338)
T ss_dssp CHHHHHHHHHHHTGGGCCTTC-EEEESCCHH
T ss_pred CcHHHHHHHHHHHHhhCCCCC-EEEEcCCch
Confidence 7777766665 32 22344 444455643
No 237
>3cin_A MYO-inositol-1-phosphate synthase-related protein; structura genomics, joint center for structural genomics, JCSG; HET: NAD; 1.70A {Thermotoga maritima MSB8}
Probab=96.37 E-value=0.019 Score=53.76 Aligned_cols=138 Identities=13% Similarity=0.184 Sum_probs=81.7
Q ss_pred CCCceEEEEcCCChHHHHHHHHHHhc--------------------CCcEEEEEEec--CCCCcchhhhhcC--------
Q 025154 33 QSNIKVIINGAVKEIGRAAVIAVTKA--------------------RGMEVAGAIDS--HSVGEDIGMVCDM-------- 82 (257)
Q Consensus 33 ~~~ikV~V~Ga~GrMG~~i~~~i~~~--------------------~~~eLvg~vd~--~~~g~d~g~~~g~-------- 82 (257)
-.|+||+|+|. |..++.+++-+... ++.++++++|. .+.|+++.+..-.
T Consensus 11 ~~mIrVaIvGv-GnvASTlvqGv~~~r~g~~~~~G~p~~~~~p~~~~Di~vvgg~DId~~kvgk~l~eAi~~~~n~~~~~ 89 (394)
T 3cin_A 11 HHMVKVLILGQ-GYVASTFVAGLEKLRKGEIEPYGVPLARELPIGFEDIKIVGSYDVDRAKIGKKLSEVVKQYWNDVDSL 89 (394)
T ss_dssp -CCEEEEEECC-SHHHHHHHHHHHHHHTTSSCCTTCTTTTCSSSCGGGEEEEEEEECBTTTTTSBHHHHHHHHCTTCCCC
T ss_pred cceeEEEEecC-CHHHHHHHHHHHHHHcCCCCCccccccccCCCCCCCcEEEEEecCCcchhHHHHHHHHhhchhccccc
Confidence 36999999996 99999998877421 35678999993 4667776543200
Q ss_pred CC--CC----------Cee-------ee----cCHHHHHhccccCCCccEEEEcC------Ch---H-------------
Q 025154 83 EQ--PL----------EIP-------VM----SDLTMVLGSISQSKARAVVIDFT------DA---S------------- 117 (257)
Q Consensus 83 ~~--~~----------gv~-------v~----~dl~~~l~~~~~~~~~DVvIDFT------~p---~------------- 117 (257)
.. +. +.+ .. .+.+++..+ .++.+.||+|... .+ +
T Consensus 90 ~~~p~~~~~v~~~~~~~~~~~~~~~~~~~~~~e~i~~~~k~-~~~~~~~Vvvn~asTE~ylpvgs~~~~~~a~~~~~~~~ 168 (394)
T 3cin_A 90 TSDPEIRKGVHLGSVRNLPIEAEGLEDSMTLKEAVDTLVKE-WTELDPDVIVNTCTTEAFVPFGNKEDLLKAIENNDKER 168 (394)
T ss_dssp SSCCBCEECCCTTTTTTSSCCBCCGGGSSCHHHHHHHHHHH-HHHHCCSEEEECCCCCCCCCCSSHHHHHHHHHTTCTTT
T ss_pred cCccccccCcccccccCcCccccchhhhhhHHHhHHHHHHH-hhhccceeEeeecccccCCCCCCHHHHHHHhhcccccc
Confidence 00 00 000 00 112222110 0113678999732 11 1
Q ss_pred --hHHHHHHHHH-----HcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCchHHHHHHHH
Q 025154 118 --TVYDNVKQAT-----AFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQ 174 (257)
Q Consensus 118 --~~~~~~~~a~-----~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfSlGvnll~~ 174 (257)
++.-++..|+ +.|++.|-|++-|... ...+.++++++|+|++= --|-.|-.++..
T Consensus 169 i~as~~YA~AAl~~aa~~aG~~fvN~~P~~ia~-~P~~~ela~~~gvpi~G-dD~ktG~T~~k~ 230 (394)
T 3cin_A 169 LTATQVYAYAAALYANKRGGAAFVNVIPTFIAN-DPAFVELAKENNLVVFG-DDGATGATPFTA 230 (394)
T ss_dssp CCHHHHHHHHHHHHHHHHTCEEEEECSSSCSTT-CHHHHHHHHHTTEEEEC-SSBSCSHHHHHH
T ss_pred CChhHHHHHHHHHhhhhhcCCceecCCCccccC-cHHHHHHHHHcCCcEec-ccccccchhHHH
Confidence 2223334444 8999999999977642 24688889998988873 337888875433
No 238
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=96.37 E-value=0.0079 Score=52.83 Aligned_cols=127 Identities=14% Similarity=0.122 Sum_probs=71.5
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCc---chhhhhcCCCCCCeee----ec---CHHHHHhcccc
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGE---DIGMVCDMEQPLEIPV----MS---DLTMVLGSISQ 103 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~---d~g~~~g~~~~~gv~v----~~---dl~~~l~~~~~ 103 (257)
.|++|.|+|++|.+|+.+++.+.+. +.++.+.......+. ....+... ...++.+ .. ++.++++
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~l~~~-~~~~v~~v~~D~~d~~~l~~a~~---- 76 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSF-SHPTFIYARPLTPDSTPSSVQLREEF-RSMGVTIIEGEMEEHEKMVSVLK---- 76 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHT-TCCEEEEECCCCTTCCHHHHHHHHHH-HHTTCEEEECCTTCHHHHHHHHT----
T ss_pred cccEEEEEcCCchhHHHHHHHHHhC-CCcEEEEECCcccccChHHHHHHHHh-hcCCcEEEEecCCCHHHHHHHHc----
Confidence 3678999999999999999998864 678776543220110 01101000 0112322 12 3445553
Q ss_pred CCCccEEEEcCCh---HhHHHHHHHHHHcC-CCeEEeCC-CCCH-------------HHHHHHHHHhhhcCceEE-EccC
Q 025154 104 SKARAVVIDFTDA---STVYDNVKQATAFG-MRSVVYVP-HIQL-------------ETVSALSAFCDKASMGCL-IAPT 164 (257)
Q Consensus 104 ~~~~DVvIDFT~p---~~~~~~~~~a~~~G-i~vViGTT-G~s~-------------e~~~~L~~~a~~~gipvl-~spN 164 (257)
.+|+||....+ ......+..|.+.| +.-++-+. |.+. .....++++.++.++++. +.||
T Consensus 77 --~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~lrp~ 154 (321)
T 3c1o_A 77 --QVDIVISALPFPMISSQIHIINAIKAAGNIKRFLPSDFGCEEDRIKPLPPFESVLEKKRIIRRAIEAAALPYTYVSAN 154 (321)
T ss_dssp --TCSEEEECCCGGGSGGGHHHHHHHHHHCCCCEEECSCCSSCGGGCCCCHHHHHHHHHHHHHHHHHHHHTCCBEEEECC
T ss_pred --CCCEEEECCCccchhhHHHHHHHHHHhCCccEEeccccccCccccccCCCcchHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 69999988653 45667788888888 65444322 3211 012345666666565543 4576
Q ss_pred chHH
Q 025154 165 LSIG 168 (257)
Q Consensus 165 fSlG 168 (257)
+=.|
T Consensus 155 ~~~~ 158 (321)
T 3c1o_A 155 CFGA 158 (321)
T ss_dssp EEHH
T ss_pred eecc
Confidence 6544
No 239
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=96.34 E-value=0.017 Score=49.89 Aligned_cols=94 Identities=19% Similarity=0.158 Sum_probs=55.8
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCC----eee-ecCHHHHHhccccCCCccEE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLE----IPV-MSDLTMVLGSISQSKARAVV 110 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~g----v~v-~~dl~~~l~~~~~~~~~DVv 110 (257)
|||+|+|+ |.||..++..+.+ .+.++.. +++... ....+.... ..+ ..+ .++. +.+. ++|+|
T Consensus 1 m~i~iiG~-G~~G~~~a~~l~~-~g~~V~~-~~r~~~--~~~~l~~~~-~~~~~~~~~~~~~~~-~~~~------~~d~v 67 (291)
T 1ks9_A 1 MKITVLGC-GALGQLWLTALCK-QGHEVQG-WLRVPQ--PYCSVNLVE-TDGSIFNESLTANDP-DFLA------TSDLL 67 (291)
T ss_dssp CEEEEECC-SHHHHHHHHHHHH-TTCEEEE-ECSSCC--SEEEEEEEC-TTSCEEEEEEEESCH-HHHH------TCSEE
T ss_pred CeEEEECc-CHHHHHHHHHHHh-CCCCEEE-EEcCcc--ceeeEEEEc-CCCceeeeeeeecCc-cccC------CCCEE
Confidence 58999996 9999999998874 5677654 554311 111111000 011 111 3444 4453 69999
Q ss_pred EEcCChHhHHHHHHHHHH---cCCCeEEeCCCCCH
Q 025154 111 IDFTDASTVYDNVKQATA---FGMRSVVYVPHIQL 142 (257)
Q Consensus 111 IDFT~p~~~~~~~~~a~~---~Gi~vViGTTG~s~ 142 (257)
|-...+..+.+.+..... .+..+|.-++|++.
T Consensus 68 i~~v~~~~~~~v~~~l~~~l~~~~~vv~~~~g~~~ 102 (291)
T 1ks9_A 68 LVTLKAWQVSDAVKSLASTLPVTTPILLIHNGMGT 102 (291)
T ss_dssp EECSCGGGHHHHHHHHHTTSCTTSCEEEECSSSCT
T ss_pred EEEecHHhHHHHHHHHHhhCCCCCEEEEecCCCCc
Confidence 988777766665554433 35667766778754
No 240
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=96.33 E-value=0.043 Score=48.60 Aligned_cols=89 Identities=13% Similarity=0.182 Sum_probs=56.8
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
+.||+|+|+.|.||..+++.+.. .++++. ++|+.. + .++++++. .+|+||-..
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~-~G~~V~-~~~~~~---~----------------~~~~~~~~------~aDvVilav 73 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRA-SGYPIS-ILDRED---W----------------AVAESILA------NADVVIVSV 73 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHT-TTCCEE-EECTTC---G----------------GGHHHHHT------TCSEEEECS
T ss_pred CCEEEEEcCCCHHHHHHHHHHHh-CCCeEE-EEECCc---c----------------cCHHHHhc------CCCEEEEeC
Confidence 46999999449999999998874 466655 345421 0 13455563 789999888
Q ss_pred ChHhHHHHHHHHHH---cCCCeEEeCCCCCHHHHHHHHHH
Q 025154 115 DASTVYDNVKQATA---FGMRSVVYVPHIQLETVSALSAF 151 (257)
Q Consensus 115 ~p~~~~~~~~~a~~---~Gi~vViGTTG~s~e~~~~L~~~ 151 (257)
.|....+.+..... .+. +|+-+++......+.+.+.
T Consensus 74 p~~~~~~vl~~l~~~l~~~~-iv~~~~svk~~~~~~~~~~ 112 (298)
T 2pv7_A 74 PINLTLETIERLKPYLTENM-LLADLTSVKREPLAKMLEV 112 (298)
T ss_dssp CGGGHHHHHHHHGGGCCTTS-EEEECCSCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhcCCCc-EEEECCCCCcHHHHHHHHh
Confidence 88777776665433 233 5655556555444555443
No 241
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=96.31 E-value=0.012 Score=51.18 Aligned_cols=126 Identities=18% Similarity=0.180 Sum_probs=70.5
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCC-cc-hhhhhcCCCCCCeee----ecC---HHHHHhccccCC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVG-ED-IGMVCDMEQPLEIPV----MSD---LTMVLGSISQSK 105 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g-~d-~g~~~g~~~~~gv~v----~~d---l~~~l~~~~~~~ 105 (257)
|++|.|+|++|.+|+.+++.+.+. +.++++........ .+ ...+... ...++.+ ..| +.++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~l~~~~~------ 75 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISL-GHPTYVLFRPEVVSNIDKVQMLLYF-KQLGAKLIEASLDDHQRLVDALK------ 75 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT-TCCEEEECCSCCSSCHHHHHHHHHH-HTTTCEEECCCSSCHHHHHHHHT------
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC-CCcEEEEECCCcccchhHHHHHHHH-HhCCeEEEeCCCCCHHHHHHHHh------
Confidence 678999999999999999998764 67877644321100 00 1111000 0123322 123 445553
Q ss_pred CccEEEEcCCh-------HhHHHHHHHHHHcC-CCeEEeC-CCCC---------H-----HHHHHHHHHhhhcCceEE-E
Q 025154 106 ARAVVIDFTDA-------STVYDNVKQATAFG-MRSVVYV-PHIQ---------L-----ETVSALSAFCDKASMGCL-I 161 (257)
Q Consensus 106 ~~DVvIDFT~p-------~~~~~~~~~a~~~G-i~vViGT-TG~s---------~-----e~~~~L~~~a~~~gipvl-~ 161 (257)
++|+||..+.+ ......+..|.+.| +.-++-+ -|.+ + .....++++.++.|+++. +
T Consensus 76 ~~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~~p~~~~y~sK~~~e~~~~~~g~~~~il 155 (313)
T 1qyd_A 76 QVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYV 155 (313)
T ss_dssp TCSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCCCSSTTHHHHHHHHHHHHHHHTTCCBCEE
T ss_pred CCCEEEECCccccchhhHHHHHHHHHHHHhcCCCceEEecCCcCCccccccCCCCCcchHHHHHHHHHHHHhcCCCeEEE
Confidence 79999987632 35567788888888 6544422 1310 0 122346666666666643 3
Q ss_pred ccCchHH
Q 025154 162 APTLSIG 168 (257)
Q Consensus 162 spNfSlG 168 (257)
-|++=.|
T Consensus 156 rp~~~~~ 162 (313)
T 1qyd_A 156 SSNMFAG 162 (313)
T ss_dssp ECCEEHH
T ss_pred Eeceecc
Confidence 4555444
No 242
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=96.29 E-value=0.013 Score=54.10 Aligned_cols=100 Identities=22% Similarity=0.237 Sum_probs=60.8
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCC--------------CCcchhhhhcCC-----CCCCeeee--c
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS--------------VGEDIGMVCDME-----QPLEIPVM--S 92 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~--------------~g~d~g~~~g~~-----~~~gv~v~--~ 92 (257)
.|+||+|+| .||+||.+++.+.+.+ ++++++-|+.. -|+--+++.-.+ ....+.++ .
T Consensus 6 ~~~kvgInG-FGRIGrlv~R~~~~~~-veivainDp~~d~~~~a~l~~yDS~hG~f~~~v~~~~~~l~i~Gk~I~v~~e~ 83 (346)
T 3h9e_O 6 RELTVGING-FGRIGRLVLRACMEKG-VKVVAVNDPFIDPEYMVYMFKYDSTHGRYKGSVEFRNGQLVVDNHEISVYQCK 83 (346)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCS
T ss_pred CeeEEEEEC-CChHHHHHHHHHHhCC-CEEEEEeCCCCChhHhcccccccCCCCCCCCcEEEcCCEEEECCEEEEEEecC
Confidence 478999999 5999999999887664 99999887410 011111110000 00123343 2
Q ss_pred CHHHHHhccccCCCccEEEEcCChHhHHHHHHHHHHcCC-CeEEeCC
Q 025154 93 DLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGM-RSVVYVP 138 (257)
Q Consensus 93 dl~~~l~~~~~~~~~DVvIDFT~p~~~~~~~~~a~~~Gi-~vViGTT 138 (257)
|++++-= .+.++|++++.|-.....+.+...++.|. .+||-.+
T Consensus 84 dp~~i~W---~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkVVIsap 127 (346)
T 3h9e_O 84 EPKQIPW---RAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAP 127 (346)
T ss_dssp SGGGCCG---GGGTSCEEEECSSSCCSHHHHHHHHHTTCSEEEESSC
T ss_pred ChhhCCc---ccccccEEEEeccccCCHHHHHHHHHcCCCEEEECCC
Confidence 4443310 01268999988777777788888888886 3555443
No 243
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=96.27 E-value=0.012 Score=51.18 Aligned_cols=125 Identities=13% Similarity=0.145 Sum_probs=71.1
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCc---c-hhhhhcCCCCCCeee----ec---CHHHHHhcccc
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGE---D-IGMVCDMEQPLEIPV----MS---DLTMVLGSISQ 103 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~---d-~g~~~g~~~~~gv~v----~~---dl~~~l~~~~~ 103 (257)
|+||.|+|++|.+|+.+++.+.+. +.++.+. ++..... + ...+... ...++.+ .+ ++.++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~l-~R~~~~~~~~~~~~~~~~l-~~~~v~~v~~D~~d~~~l~~~~~---- 76 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDL-GHPTFLL-VRESTASSNSEKAQLLESF-KASGANIVHGSIDDHASLVEAVK---- 76 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT-TCCEEEE-CCCCCTTTTHHHHHHHHHH-HTTTCEEECCCTTCHHHHHHHHH----
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC-CCCEEEE-ECCcccccCHHHHHHHHHH-HhCCCEEEEeccCCHHHHHHHHc----
Confidence 678999999999999999998864 6777654 3321111 0 0000000 0123322 12 3445554
Q ss_pred CCCccEEEEcCCh---HhHHHHHHHHHHcC-CCeEEeCC-CCC--------H-----HHHHHHHHHhhhcCceEE-EccC
Q 025154 104 SKARAVVIDFTDA---STVYDNVKQATAFG-MRSVVYVP-HIQ--------L-----ETVSALSAFCDKASMGCL-IAPT 164 (257)
Q Consensus 104 ~~~~DVvIDFT~p---~~~~~~~~~a~~~G-i~vViGTT-G~s--------~-----e~~~~L~~~a~~~gipvl-~spN 164 (257)
++|+||....+ ......+..|.+.| +.-++-.+ |.+ + .....++++.++.|+++. +.||
T Consensus 77 --~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~~g~~~~~~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~~r~~ 154 (308)
T 1qyc_A 77 --NVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSN 154 (308)
T ss_dssp --TCSEEEECCCGGGSGGGHHHHHHHHHHCCCSEEECSCCSSCTTSCCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECC
T ss_pred --CCCEEEECCcchhhhhHHHHHHHHHhcCCCceEeecccccCccccccCCcchhHHHHHHHHHHHHHhcCCCeEEEEec
Confidence 69999988753 34567778888888 65555322 311 1 112345666666666644 4566
Q ss_pred chHH
Q 025154 165 LSIG 168 (257)
Q Consensus 165 fSlG 168 (257)
+=.|
T Consensus 155 ~~~~ 158 (308)
T 1qyc_A 155 CFAG 158 (308)
T ss_dssp EEHH
T ss_pred eecc
Confidence 5444
No 244
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.25 E-value=0.012 Score=49.42 Aligned_cols=84 Identities=14% Similarity=0.250 Sum_probs=52.1
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCe-e-ee----cCHHHHHhccccCCCcc
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEI-P-VM----SDLTMVLGSISQSKARA 108 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv-~-v~----~dl~~~l~~~~~~~~~D 108 (257)
.+||.|+|++|.+|+.+++.+.+ .+.++++...+. .....+.. .++ . +. +++.+.+. ++|
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~-~G~~V~~~~R~~---~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~------~~D 86 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKN-KGHEPVAMVRNE---EQGPELRE----RGASDIVVANLEEDFSHAFA------SID 86 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEESSG---GGHHHHHH----TTCSEEEECCTTSCCGGGGT------TCS
T ss_pred CCeEEEECCCChHHHHHHHHHHh-CCCeEEEEECCh---HHHHHHHh----CCCceEEEcccHHHHHHHHc------CCC
Confidence 47999999999999999999875 578887755321 11222211 122 1 11 44455553 799
Q ss_pred EEEEcCCh--------------HhHHHHHHHHHHcCCC
Q 025154 109 VVIDFTDA--------------STVYDNVKQATAFGMR 132 (257)
Q Consensus 109 VvIDFT~p--------------~~~~~~~~~a~~~Gi~ 132 (257)
+||....+ ......++.|.+.+..
T Consensus 87 ~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~ 124 (236)
T 3e8x_A 87 AVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIK 124 (236)
T ss_dssp EEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCC
T ss_pred EEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCC
Confidence 99987532 1234566667677654
No 245
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=96.22 E-value=0.018 Score=51.10 Aligned_cols=34 Identities=24% Similarity=0.186 Sum_probs=28.5
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEe
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (257)
.++||.|+|++|.+|+.+++.+.+ .+.++++...
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r 57 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLK-LNQVVIGLDN 57 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEEC
T ss_pred CCCeEEEECCCcHHHHHHHHHHHH-CCCEEEEEeC
Confidence 357999999999999999998875 5788887654
No 246
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.18 E-value=0.0077 Score=46.88 Aligned_cols=125 Identities=11% Similarity=0.123 Sum_probs=70.0
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeee-e---cCHHHHHhccccCCCccEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-M---SDLTMVLGSISQSKARAVV 110 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v-~---~dl~~~l~~~~~~~~~DVv 110 (257)
|.+|.|+|+ |++|+.+++.+.+ .+.+++. +|... .....+. ..++.+ + .+.+.+.+. .-.++|++
T Consensus 6 ~~~v~I~G~-G~iG~~la~~L~~-~g~~V~~-id~~~--~~~~~~~----~~~~~~~~gd~~~~~~l~~~--~~~~~d~v 74 (141)
T 3llv_A 6 RYEYIVIGS-EAAGVGLVRELTA-AGKKVLA-VDKSK--EKIELLE----DEGFDAVIADPTDESFYRSL--DLEGVSAV 74 (141)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHH-TTCCEEE-EESCH--HHHHHHH----HTTCEEEECCTTCHHHHHHS--CCTTCSEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHH-CCCeEEE-EECCH--HHHHHHH----HCCCcEEECCCCCHHHHHhC--CcccCCEE
Confidence 568999996 9999999998875 4777764 55431 1111121 112222 2 233222210 01368988
Q ss_pred EEcCCh-HhHHHHHHHHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCchHHHHHHHHH
Q 025154 111 IDFTDA-STVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQA 175 (257)
Q Consensus 111 IDFT~p-~~~~~~~~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfSlGvnll~~~ 175 (257)
|..+.. +.....+..+.+.+...|+... -+.+..+.+ ++.|+-.+++|....|-.+...+
T Consensus 75 i~~~~~~~~n~~~~~~a~~~~~~~iia~~-~~~~~~~~l----~~~G~~~vi~p~~~~~~~l~~~i 135 (141)
T 3llv_A 75 LITGSDDEFNLKILKALRSVSDVYAIVRV-SSPKKKEEF----EEAGANLVVLVADAVKQAFMDKI 135 (141)
T ss_dssp EECCSCHHHHHHHHHHHHHHCCCCEEEEE-SCGGGHHHH----HHTTCSEEEEHHHHHHHHHHHHH
T ss_pred EEecCCHHHHHHHHHHHHHhCCceEEEEE-cChhHHHHH----HHcCCCEEECHHHHHHHHHHHHH
Confidence 876653 3334445555566644444333 223334445 34678889999888887665544
No 247
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=96.18 E-value=0.01 Score=54.93 Aligned_cols=96 Identities=24% Similarity=0.201 Sum_probs=57.6
Q ss_pred CceEEEEcCCChHHHHHHHH----HHhcCCcEEEEEEecCC--------------CCcchhhhhc--------CCC----
Q 025154 35 NIKVIINGAVKEIGRAAVIA----VTKARGMEVAGAIDSHS--------------VGEDIGMVCD--------MEQ---- 84 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~----i~~~~~~eLvg~vd~~~--------------~g~d~g~~~g--------~~~---- 84 (257)
++||+|.| .||+||.+.++ +.+.+++++|++-|+.. -|+--+++.- .+.
T Consensus 2 ~~kv~ING-FGrIGr~v~Ra~~~~~~~~~~~~vvaINd~~~d~~~~a~llkyDS~hG~f~~~v~~~~~~~~~~~~~~l~i 80 (359)
T 3ids_C 2 PIKVGING-FGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFKYEVTTTKSSPSVAKDDTLVV 80 (359)
T ss_dssp CEEEEEEC-TTHHHHHHHHHHHHTTCBTTTEEEEEEECSSCCHHHHHHHHHEETTTEECSSCEEEECSCTTSSSCCEEEE
T ss_pred ceEEEEEC-CChHHHHHHHHhHHHHhcCCCcEEEEEecCCCCHHHHHHHhcccCCCCCEeeEEEecccccccCCCCEEEE
Confidence 58999999 59999999998 56667899999987310 0110011100 000
Q ss_pred -CCCeeeec---CHHHHH-hccccCCCccEEEEcCChHhHHHHHHHHHHcCCC-eEE
Q 025154 85 -PLEIPVMS---DLTMVL-GSISQSKARAVVIDFTDASTVYDNVKQATAFGMR-SVV 135 (257)
Q Consensus 85 -~~gv~v~~---dl~~~l-~~~~~~~~~DVvIDFT~p~~~~~~~~~a~~~Gi~-vVi 135 (257)
...+.++. |++++- .+ .++|+|++.|--....+.+...++.|.. |||
T Consensus 81 nGk~I~v~~~e~dp~~i~w~~----~gvDiVlesTG~f~s~e~A~~hl~aGAkkViI 133 (359)
T 3ids_C 81 NGHRILCVKAQRNPADLPWGK----LGVEYVIESTGLFTAKAAAEGHLRGGARKVVI 133 (359)
T ss_dssp TTEEEEECCCCSSTTTSCHHH----HTCCEEEECSSSCCBHHHHTHHHHTTCCEEEE
T ss_pred CCEEEEEEEccCCcccCCccc----cCccEEEEeccccCCHHHHHHHHHcCCCEEEE
Confidence 01233442 333321 00 2688989877666667777788888865 444
No 248
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=96.17 E-value=0.034 Score=48.49 Aligned_cols=32 Identities=16% Similarity=0.230 Sum_probs=24.4
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEe
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (257)
|++|.|+|++|.+|+.+++.+.+. + .++.+..
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~-g-~~v~~~~ 32 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSES-N-EIVVIDN 32 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTT-S-CEEEECC
T ss_pred CCEEEEECCCchHHHHHHHHHHhC-C-CEEEEEc
Confidence 679999999999999999988754 4 5555443
No 249
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=96.17 E-value=0.047 Score=51.47 Aligned_cols=136 Identities=13% Similarity=0.153 Sum_probs=78.5
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecC-----CCCcchhhhhcCCCC------C-CeeeecCHHHHHhcccc
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH-----SVGEDIGMVCDMEQP------L-EIPVMSDLTMVLGSISQ 103 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~-----~~g~d~g~~~g~~~~------~-gv~v~~dl~~~l~~~~~ 103 (257)
.||+|.| .|.||+..++.+.+..+.+++++.|+. ..|-|...+...... + +.. +-+.++++.
T Consensus 210 ~~vaVqG-~GnVG~~~a~~L~e~~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~l~~y~~a~-~~~~~eil~---- 283 (415)
T 2tmg_A 210 ATVAVQG-FGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGE-RITNEELLE---- 283 (415)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCCEEEEEECSSCEEECTTCCCHHHHHHHHHHSSCSTTCSSSE-EECHHHHTT----
T ss_pred CEEEEEC-CcHHHHHHHHHHHHhcCCEEEEEEeCCCeEECCCCCCHHHHHHHHHhhCCcccCCCce-EcCchhhhc----
Confidence 6899999 599999999987753799999999953 234454333211000 0 111 124567775
Q ss_pred CCCccEEEEcCChHhHHHHHHHHHHcCCCeEEeCC--CCCHHHHHHHHHHhhhcCceEE--EccCchHHHHH-HHHHHHH
Q 025154 104 SKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVP--HIQLETVSALSAFCDKASMGCL--IAPTLSIGSIL-LQQAAIS 178 (257)
Q Consensus 104 ~~~~DVvIDFT~p~~~~~~~~~a~~~Gi~vViGTT--G~s~e~~~~L~~~a~~~gipvl--~spNfSlGvnl-l~~~a~~ 178 (257)
.++||+|.++..... +..-+.+.+..+|++-- .++++..+.| +++|+.++ +..|-. ||.. -.+..+-
T Consensus 284 -~~~DIliP~A~~n~i--~~~~a~~l~ak~V~EgAN~p~t~~a~~~l----~~~Gi~~~PD~~aNaG-GV~~s~~E~vqN 355 (415)
T 2tmg_A 284 -LDVDILVPAALEGAI--HAGNAERIKAKAVVEGANGPTTPEADEIL----SRRGILVVPDILANAG-GVTVSYFEWVQD 355 (415)
T ss_dssp -CSCSEEEECSSTTSB--CHHHHTTCCCSEEECCSSSCBCHHHHHHH----HHTTCEEECHHHHTCH-HHHHHHHHHHHH
T ss_pred -CCCcEEEecCCcCcc--CcccHHHcCCeEEEeCCCcccCHHHHHHH----HHCCCEEEChHHHhCC-CceEEEEEEEec
Confidence 489999998765443 12333455888888765 4565443333 24445444 334533 6654 1123334
Q ss_pred hcCCCCC
Q 025154 179 ASFHYKN 185 (257)
Q Consensus 179 l~~~~~D 185 (257)
+...+|+
T Consensus 356 ~~~~~w~ 362 (415)
T 2tmg_A 356 LQSFFWD 362 (415)
T ss_dssp HTTCCCC
T ss_pred CccccCC
Confidence 4434454
No 250
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=96.16 E-value=0.01 Score=52.66 Aligned_cols=115 Identities=17% Similarity=0.161 Sum_probs=67.7
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeee--ecCHHHHHhccccCCCccEEEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV--MSDLTMVLGSISQSKARAVVID 112 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v--~~dl~~~l~~~~~~~~~DVvID 112 (257)
..+|+|+| .|+||+.+++.+. .-++++. ++|+.. .....+. ..|+.. +.++++++. .+|+||.
T Consensus 155 g~~v~IiG-~G~iG~~~a~~l~-~~G~~V~-~~dr~~--~~~~~~~----~~g~~~~~~~~l~~~l~------~aDvVi~ 219 (293)
T 3d4o_A 155 GANVAVLG-LGRVGMSVARKFA-ALGAKVK-VGARES--DLLARIA----EMGMEPFHISKAAQELR------DVDVCIN 219 (293)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHH-HTTCEEE-EEESSH--HHHHHHH----HTTSEEEEGGGHHHHTT------TCSEEEE
T ss_pred CCEEEEEe-eCHHHHHHHHHHH-hCCCEEE-EEECCH--HHHHHHH----HCCCeecChhhHHHHhc------CCCEEEE
Confidence 45899999 4999999999876 4567765 466531 1111111 123333 357788774 7999998
Q ss_pred cCChHhHHHHHHHHHHcCCCeEEeCC-CCCHHHHHHHHHHhhhcCceEEEccCchHHH
Q 025154 113 FTDASTVYDNVKQATAFGMRSVVYVP-HIQLETVSALSAFCDKASMGCLIAPTLSIGS 169 (257)
Q Consensus 113 FT~p~~~~~~~~~a~~~Gi~vViGTT-G~s~e~~~~L~~~a~~~gipvl~spNfSlGv 169 (257)
.+.+....+.....++.|.-+| =+. |-.. .+ + +.+++.|+.++..||+.-.+
T Consensus 220 ~~p~~~i~~~~l~~mk~~~~li-n~ar~~~~--~~-~-~~a~~~Gv~~~~~~~l~~~v 272 (293)
T 3d4o_A 220 TIPALVVTANVLAEMPSHTFVI-DLASKPGG--TD-F-RYAEKRGIKALLVPGLPGIV 272 (293)
T ss_dssp CCSSCCBCHHHHHHSCTTCEEE-ECSSTTCS--BC-H-HHHHHHTCEEEECCCHHHHH
T ss_pred CCChHHhCHHHHHhcCCCCEEE-EecCCCCC--CC-H-HHHHHCCCEEEECCCCCccc
Confidence 8754322222222344444333 332 2111 11 2 44566788888899998777
No 251
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=96.15 E-value=0.014 Score=50.75 Aligned_cols=93 Identities=20% Similarity=0.269 Sum_probs=56.0
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcc----hhhhhcCCCCCCeee----ecC---HHHHHhcccc
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGED----IGMVCDMEQPLEIPV----MSD---LTMVLGSISQ 103 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d----~g~~~g~~~~~gv~v----~~d---l~~~l~~~~~ 103 (257)
|++|.|+|++|.+|+.+++.+.+. +.++++...+.....+ ...+... ...++.+ ..| +.++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~~~~~~~~~~~~~~~~l-~~~~v~~v~~D~~d~~~l~~~~~---- 75 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKA-GNPTYALVRKTITAANPETKEELIDNY-QSLGVILLEGDINDHETLVKAIK---- 75 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHH-TCCEEEEECCSCCSSCHHHHHHHHHHH-HHTTCEEEECCTTCHHHHHHHHT----
T ss_pred CcEEEEECCCchHHHHHHHHHHhC-CCcEEEEECCCcccCChHHHHHHHHHH-HhCCCEEEEeCCCCHHHHHHHHh----
Confidence 678999999999999999998865 5777764432201111 1001000 0112322 123 344553
Q ss_pred CCCccEEEEcCC---hHhHHHHHHHHHHcC-CCeEE
Q 025154 104 SKARAVVIDFTD---ASTVYDNVKQATAFG-MRSVV 135 (257)
Q Consensus 104 ~~~~DVvIDFT~---p~~~~~~~~~a~~~G-i~vVi 135 (257)
.+|+||.... .......+..|.+.| +.-++
T Consensus 76 --~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v 109 (307)
T 2gas_A 76 --QVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFF 109 (307)
T ss_dssp --TCSEEEECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred --CCCEEEECCcccccccHHHHHHHHHhcCCceEEe
Confidence 6999998764 355677788888888 65554
No 252
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=96.14 E-value=0.018 Score=52.13 Aligned_cols=99 Identities=12% Similarity=0.051 Sum_probs=57.1
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhh-------------hcCCC--------CCCeeeecC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMV-------------CDMEQ--------PLEIPVMSD 93 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~-------------~g~~~--------~~gv~v~~d 93 (257)
+.||+|+|+ |.||..++..++. .+++++ ++|+.. ..+..+ .|... ...+..++|
T Consensus 6 ~~kI~vIGa-G~MG~~iA~~la~-~G~~V~-l~d~~~--~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~ 80 (319)
T 2dpo_A 6 AGDVLIVGS-GLVGRSWAMLFAS-GGFRVK-LYDIEP--RQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTN 80 (319)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHH-TTCCEE-EECSCH--HHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECC
T ss_pred CceEEEEee-CHHHHHHHHHHHH-CCCEEE-EEeCCH--HHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCC
Confidence 468999995 9999999998774 578765 467431 001111 01100 002567789
Q ss_pred HHHHHhccccCCCccEEEEcCChH--hHHHHHHH---HHHcCCCeEEeCCCCCHHH
Q 025154 94 LTMVLGSISQSKARAVVIDFTDAS--TVYDNVKQ---ATAFGMRSVVYVPHIQLET 144 (257)
Q Consensus 94 l~~~l~~~~~~~~~DVvIDFT~p~--~~~~~~~~---a~~~Gi~vViGTTG~s~e~ 144 (257)
++++++ ++|+||.....+ .....+.. .+..+.-++.-|++++..+
T Consensus 81 ~~eav~------~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~~ 130 (319)
T 2dpo_A 81 LAEAVE------GVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSK 130 (319)
T ss_dssp HHHHTT------TEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHH
T ss_pred HHHHHh------cCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCChHHHH
Confidence 998885 799999776432 22233332 2233443445567887644
No 253
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=96.13 E-value=0.042 Score=48.27 Aligned_cols=33 Identities=24% Similarity=0.218 Sum_probs=28.3
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEe
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (257)
|||.|+|++|.+|+.+++.+.+.++.++++...
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r 33 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDI 33 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEES
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeC
Confidence 589999999999999999998766888887543
No 254
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=96.13 E-value=0.068 Score=48.44 Aligned_cols=74 Identities=18% Similarity=0.125 Sum_probs=45.9
Q ss_pred CCCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCC---C--cchhhhhc-CCCCCCeeeecCHHHHHhccccCCC
Q 025154 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSV---G--EDIGMVCD-MEQPLEIPVMSDLTMVLGSISQSKA 106 (257)
Q Consensus 33 ~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~---g--~d~g~~~g-~~~~~gv~v~~dl~~~l~~~~~~~~ 106 (257)
+.++||+|+|+ |.||..++..++...-++ +..+|.... + .+...... ...+..+..++|+++.+. +
T Consensus 7 ~~~~kI~VIGa-G~vG~~lA~~la~~g~~~-V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~------~ 78 (331)
T 1pzg_A 7 QRRKKVAMIGS-GMIGGTMGYLCALRELAD-VVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALT------G 78 (331)
T ss_dssp SCCCEEEEECC-SHHHHHHHHHHHHHTCCE-EEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHT------T
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCe-EEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhC------C
Confidence 33579999997 999999999887643237 667875421 1 11111100 001234555789987774 7
Q ss_pred ccEEEEcC
Q 025154 107 RAVVIDFT 114 (257)
Q Consensus 107 ~DVvIDFT 114 (257)
+|+||...
T Consensus 79 aDiVi~a~ 86 (331)
T 1pzg_A 79 ADCVIVTA 86 (331)
T ss_dssp CSEEEECC
T ss_pred CCEEEEcc
Confidence 99988653
No 255
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=96.12 E-value=0.0078 Score=55.41 Aligned_cols=98 Identities=11% Similarity=0.115 Sum_probs=61.1
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCC----------------CCcchhh-----hhcCCCCCCeeeec-
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS----------------VGEDIGM-----VCDMEQPLEIPVMS- 92 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~----------------~g~d~g~-----~~g~~~~~gv~v~~- 92 (257)
..||.|+|+ |..|..+++.+.. .++.=+.++|... .|+.-.+ +..+.....+..+.
T Consensus 34 ~~~VlIvGa-GGlGs~va~~La~-aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~~~ 111 (340)
T 3rui_A 34 NTKVLLLGA-GTLGCYVSRALIA-WGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKL 111 (340)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHH-TTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEECC
T ss_pred CCEEEEECC-CHHHHHHHHHHHH-cCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEEec
Confidence 358999996 9999999999874 5776666777321 1111111 11110011121121
Q ss_pred --------------------CHHHHHhccccCCCccEEEEcC-ChHhHHHHHHHHHHcCCCeEEeCCCC
Q 025154 93 --------------------DLTMVLGSISQSKARAVVIDFT-DASTVYDNVKQATAFGMRSVVYVPHI 140 (257)
Q Consensus 93 --------------------dl~~~l~~~~~~~~~DVvIDFT-~p~~~~~~~~~a~~~Gi~vViGTTG~ 140 (257)
++.+++. ++|+|||.| ++++-...-..|.++|+|+|.+..||
T Consensus 112 ~i~~~g~~~~~~~~~~~~~~~l~~~l~------~~DlVvd~tDn~~tR~lin~~c~~~~~plI~aa~G~ 174 (340)
T 3rui_A 112 SIPMIGHKLVNEEAQHKDFDRLRALIK------EHDIIFLLVDSRESRWLPSLLSNIENKTVINAALGF 174 (340)
T ss_dssp CCCCTTSCCSCHHHHHHHHHHHHHHHH------HCSEEEECCSSTGGGHHHHHHHHHTTCEEEEEEECS
T ss_pred cccccCcccchhhhhcCCHHHHHhhhc------cCCEEEecCCCHHHHHHHHHHHHHcCCcEEEeeecc
Confidence 2344554 689999998 45655667789999999999876565
No 256
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=96.12 E-value=0.015 Score=50.49 Aligned_cols=33 Identities=27% Similarity=0.293 Sum_probs=27.7
Q ss_pred CceEEEEcCCChHHHHHHHHHHhc-CCcEEEEEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKA-RGMEVAGAI 67 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~-~~~eLvg~v 67 (257)
++||.|+|++|.+|+.+++.+.+. ++.++++..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~ 35 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASD 35 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEE
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEc
Confidence 368999999999999999998876 477877654
No 257
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=96.08 E-value=0.016 Score=50.72 Aligned_cols=81 Identities=12% Similarity=0.045 Sum_probs=50.8
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
+|||.|+|++|.+|+.+++.+.+ .+.++++. ++... -| +.-.++++++++. .++|+||.+.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~-~g~~v~~~-~r~~~-~D------------~~d~~~~~~~~~~----~~~d~vih~a 63 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQ-RGDVELVL-RTRDE-LN------------LLDSRAVHDFFAS----ERIDQVYLAA 63 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTT-CTTEEEEC-CCTTT-CC------------TTCHHHHHHHHHH----HCCSEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHh-CCCeEEEE-ecCcc-CC------------ccCHHHHHHHHHh----cCCCEEEEcC
Confidence 47999999999999999998875 57777663 32210 01 1112344555542 2699999875
Q ss_pred Ch-------------------HhHHHHHHHHHHcCC-CeE
Q 025154 115 DA-------------------STVYDNVKQATAFGM-RSV 134 (257)
Q Consensus 115 ~p-------------------~~~~~~~~~a~~~Gi-~vV 134 (257)
.+ ......++.|.+.++ .+|
T Consensus 64 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v 103 (321)
T 1e6u_A 64 AKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLL 103 (321)
T ss_dssp CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred eecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEE
Confidence 31 122355677778887 444
No 258
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=96.07 E-value=0.021 Score=50.20 Aligned_cols=37 Identities=14% Similarity=0.225 Sum_probs=27.7
Q ss_pred CCCCCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEe
Q 025154 31 PPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (257)
Q Consensus 31 ~~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (257)
|++.++||.|+|++|.+|+.+++.+.+ .+.++++...
T Consensus 10 ~~~~~~~vlVTGatG~iG~~l~~~L~~-~g~~V~~~~r 46 (335)
T 1rpn_A 10 HGSMTRSALVTGITGQDGAYLAKLLLE-KGYRVHGLVA 46 (335)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHH-TTCEEEEEEC
T ss_pred ccccCCeEEEECCCChHHHHHHHHHHH-CCCeEEEEeC
Confidence 566789999999999999999998876 4788887554
No 259
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=96.05 E-value=0.054 Score=50.74 Aligned_cols=120 Identities=15% Similarity=0.158 Sum_probs=71.7
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeee-ec---CHHHHHhccccCCCccEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-MS---DLTMVLGSISQSKARAVV 110 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v-~~---dl~~~l~~~~~~~~~DVv 110 (257)
.++|.|+|+ |++|+.+++.+.+ .+.+++. +|.+. ..+..+. ..|+++ +. +.+- +.+. .-.++|+|
T Consensus 4 ~~~viIiG~-Gr~G~~va~~L~~-~g~~vvv-Id~d~--~~v~~~~----~~g~~vi~GDat~~~~-L~~a-gi~~A~~v 72 (413)
T 3l9w_A 4 GMRVIIAGF-GRFGQITGRLLLS-SGVKMVV-LDHDP--DHIETLR----KFGMKVFYGDATRMDL-LESA-GAAKAEVL 72 (413)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHH-TTCCEEE-EECCH--HHHHHHH----HTTCCCEESCTTCHHH-HHHT-TTTTCSEE
T ss_pred CCeEEEECC-CHHHHHHHHHHHH-CCCCEEE-EECCH--HHHHHHH----hCCCeEEEcCCCCHHH-HHhc-CCCccCEE
Confidence 468999995 9999999998874 5777764 56431 1111111 223433 22 3322 2210 00368988
Q ss_pred EEcCC-hHhHHHHHHHHHHcCCC--eEEeCCCCCHHHHHHHHHHhhhcCceEEEccCchHHHHH
Q 025154 111 IDFTD-ASTVYDNVKQATAFGMR--SVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSIL 171 (257)
Q Consensus 111 IDFT~-p~~~~~~~~~a~~~Gi~--vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfSlGvnl 171 (257)
|-.+. ++.....+..+.+.+.+ +|+=+ .+.++.+.|.+ .|+-.++.|+|-.|..|
T Consensus 73 iv~~~~~~~n~~i~~~ar~~~p~~~Iiara--~~~~~~~~L~~----~Gad~Vi~~~~~~a~~l 130 (413)
T 3l9w_A 73 INAIDDPQTNLQLTEMVKEHFPHLQIIARA--RDVDHYIRLRQ----AGVEKPERETFEGALKT 130 (413)
T ss_dssp EECCSSHHHHHHHHHHHHHHCTTCEEEEEE--SSHHHHHHHHH----TTCSSCEETTHHHHHHH
T ss_pred EECCCChHHHHHHHHHHHHhCCCCeEEEEE--CCHHHHHHHHH----CCCCEEECccHHHHHHH
Confidence 86664 55556667777777755 44322 34555566643 56778899999888765
No 260
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=96.05 E-value=0.021 Score=50.55 Aligned_cols=89 Identities=21% Similarity=0.221 Sum_probs=51.9
Q ss_pred CCCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEE
Q 025154 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVID 112 (257)
Q Consensus 33 ~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvID 112 (257)
..+++|.|+|++|.+|+.+++.+.+ .+.++++...... ...+..+ ..++.-.++++++++ ++|+||.
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~-~G~~V~~~~r~~~-~~~~~~~-----~~Dl~d~~~~~~~~~------~~d~vih 83 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRT-QGRTVRGFDLRPS-GTGGEEV-----VGSLEDGQALSDAIM------GVSAVLH 83 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHH-TTCCEEEEESSCC-SSCCSEE-----ESCTTCHHHHHHHHT------TCSEEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHh-CCCEEEEEeCCCC-CCCccEE-----ecCcCCHHHHHHHHh------CCCEEEE
Confidence 4468999999999999999998875 4788877543221 1000000 011111223455563 7999998
Q ss_pred cCCh----------------HhHHHHHHHHHHcCC-CeE
Q 025154 113 FTDA----------------STVYDNVKQATAFGM-RSV 134 (257)
Q Consensus 113 FT~p----------------~~~~~~~~~a~~~Gi-~vV 134 (257)
+..+ ..+...++.|.+.|+ .+|
T Consensus 84 ~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V 122 (347)
T 4id9_A 84 LGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFV 122 (347)
T ss_dssp CCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEE
T ss_pred CCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEE
Confidence 6421 123556778888887 444
No 261
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.04 E-value=0.037 Score=46.39 Aligned_cols=144 Identities=15% Similarity=0.151 Sum_probs=76.4
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeee-ec---CHHHHHhccccCCCccEEE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-MS---DLTMVLGSISQSKARAVVI 111 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v-~~---dl~~~l~~~~~~~~~DVvI 111 (257)
|||.|+|+ |+||+.+++.+.+ .+.+++ ++|... ..+..+.. ..++.+ +. +.+.+.+. .-.++|++|
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~-~g~~v~-vid~~~--~~~~~l~~---~~~~~~i~gd~~~~~~l~~a--~i~~ad~vi 70 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLS-RKYGVV-IINKDR--ELCEEFAK---KLKATIIHGDGSHKEILRDA--EVSKNDVVV 70 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHH-TTCCEE-EEESCH--HHHHHHHH---HSSSEEEESCTTSHHHHHHH--TCCTTCEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHh-CCCeEE-EEECCH--HHHHHHHH---HcCCeEEEcCCCCHHHHHhc--CcccCCEEE
Confidence 68999995 9999999998875 577777 456431 11112211 123322 22 22222110 003789988
Q ss_pred EcCChHhHHHHH-HHHHH-cCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCchHHHHHHHHHHHH----hcCCCCC
Q 025154 112 DFTDASTVYDNV-KQATA-FGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAIS----ASFHYKN 185 (257)
Q Consensus 112 DFT~p~~~~~~~-~~a~~-~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfSlGvnll~~~a~~----l~~~~~D 185 (257)
-.+..+.....+ ..+.+ ++..-++.... +++..+.+ ++.|+-.+++|....+-.+...+... +.....+
T Consensus 71 ~~~~~d~~n~~~~~~a~~~~~~~~iia~~~-~~~~~~~l----~~~G~d~vi~p~~~~~~~l~~~~~~~~~~~~~~~~~~ 145 (218)
T 3l4b_C 71 ILTPRDEVNLFIAQLVMKDFGVKRVVSLVN-DPGNMEIF----KKMGITTVLNLTTLITNTVEALIFPDEFSSIIPLEQG 145 (218)
T ss_dssp ECCSCHHHHHHHHHHHHHTSCCCEEEECCC-SGGGHHHH----HHHTCEECCCHHHHHHHHHHHHHCTTSCEECSCCSTT
T ss_pred EecCCcHHHHHHHHHHHHHcCCCeEEEEEe-CcchHHHH----HHCCCCEEECHHHHHHHHHHHHhccCCceEEEEeCCC
Confidence 777555443333 34444 56665655443 23344445 44567788888877666544333210 0011224
Q ss_pred eEEEeccCC
Q 025154 186 VEIVESRPN 194 (257)
Q Consensus 186 iEIiE~HH~ 194 (257)
+++.|..=.
T Consensus 146 ~~~~e~~v~ 154 (218)
T 3l4b_C 146 IEFLSVNVE 154 (218)
T ss_dssp EEEEEEECC
T ss_pred cEEEEEEEC
Confidence 777776543
No 262
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=96.03 E-value=0.013 Score=49.08 Aligned_cols=34 Identities=15% Similarity=0.256 Sum_probs=29.0
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcC-CcEEEEEE
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKAR-GMEVAGAI 67 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~-~~eLvg~v 67 (257)
.+++|.|+|++|.+|+.+++.+.+.. +.++++..
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~ 37 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLV 37 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEE
Confidence 36789999999999999999998765 78888754
No 263
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=96.01 E-value=0.0069 Score=54.24 Aligned_cols=117 Identities=14% Similarity=0.128 Sum_probs=65.8
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhh----hhc-CCCCC---CeeeecCHHHHHhccccCCC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGM----VCD-MEQPL---EIPVMSDLTMVLGSISQSKA 106 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~----~~g-~~~~~---gv~v~~dl~~~l~~~~~~~~ 106 (257)
+|||+|+|+ |.||..++..+.+ .+.++.. +++... +.+.+ +.+ ..... .+.++++++++. ..
T Consensus 2 ~mkI~IiGa-GaiG~~~a~~L~~-~g~~V~~-~~r~~~-~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~------~~ 71 (320)
T 3i83_A 2 SLNILVIGT-GAIGSFYGALLAK-TGHCVSV-VSRSDY-ETVKAKGIRIRSATLGDYTFRPAAVVRSAAELE------TK 71 (320)
T ss_dssp -CEEEEESC-CHHHHHHHHHHHH-TTCEEEE-ECSTTH-HHHHHHCEEEEETTTCCEEECCSCEESCGGGCS------SC
T ss_pred CCEEEEECc-CHHHHHHHHHHHh-CCCeEEE-EeCChH-HHHHhCCcEEeecCCCcEEEeeeeeECCHHHcC------CC
Confidence 479999996 9999999998875 4666654 454321 11111 000 00000 234567777654 27
Q ss_pred ccEEEEcCChHhHHHHH---HHHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCc
Q 025154 107 RAVVIDFTDASTVYDNV---KQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTL 165 (257)
Q Consensus 107 ~DVvIDFT~p~~~~~~~---~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNf 165 (257)
+|+||-++.+....+.+ ...+..+..+|+-..|+..+ +.|++.... -.++.++.|
T Consensus 72 ~DlVilavK~~~~~~~l~~l~~~l~~~t~Iv~~~nGi~~~--~~l~~~~~~--~~vl~g~~~ 129 (320)
T 3i83_A 72 PDCTLLCIKVVEGADRVGLLRDAVAPDTGIVLISNGIDIE--PEVAAAFPD--NEVISGLAF 129 (320)
T ss_dssp CSEEEECCCCCTTCCHHHHHTTSCCTTCEEEEECSSSSCS--HHHHHHSTT--SCEEEEEEE
T ss_pred CCEEEEecCCCChHHHHHHHHhhcCCCCEEEEeCCCCChH--HHHHHHCCC--CcEEEEEEE
Confidence 89999777554443333 33344566777777898643 245554433 245555444
No 264
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=94.97 E-value=0.0012 Score=55.94 Aligned_cols=91 Identities=12% Similarity=0.058 Sum_probs=54.0
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEc
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDF 113 (257)
..|||+|+|+ |.||+.+++.+.+ .++++. ++++... ...+. ..++.+. +++++++ .+|+||-.
T Consensus 18 ~~~~I~iIG~-G~mG~~la~~L~~-~G~~V~-~~~r~~~---~~~~~----~~g~~~~-~~~~~~~------~aDvVila 80 (201)
T 2yjz_A 18 KQGVVCIFGT-GDFGKSLGLKMLQ-CGYSVV-FGSRNPQ---VSSLL----PRGAEVL-CYSEAAS------RSDVIVLA 80 (201)
Confidence 4579999995 9999999998764 456654 3554311 11121 2345544 6667664 79998876
Q ss_pred CChHhHHHHHHHH-HHcCCCeEEeCCCCC
Q 025154 114 TDASTVYDNVKQA-TAFGMRSVVYVPHIQ 141 (257)
Q Consensus 114 T~p~~~~~~~~~a-~~~Gi~vViGTTG~s 141 (257)
+.+....+.+... ...+.-+|.-++|++
T Consensus 81 v~~~~~~~v~~l~~~~~~~ivI~~~~G~~ 109 (201)
T 2yjz_A 81 VHREHYDFLAELADSLKGRVLIDVSNNQK 109 (201)
Confidence 6655443333111 223555565566774
No 265
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=95.95 E-value=0.02 Score=50.65 Aligned_cols=33 Identities=21% Similarity=0.161 Sum_probs=28.2
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcC-CcEEEEEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKAR-GMEVAGAI 67 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~-~~eLvg~v 67 (257)
|++|.|+|++|.+|+.+++.+.+.. +.++++..
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~ 37 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLD 37 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEe
Confidence 6899999999999999999988653 78887654
No 266
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=95.95 E-value=0.032 Score=47.91 Aligned_cols=27 Identities=15% Similarity=0.375 Sum_probs=23.4
Q ss_pred CCCceEEEEcCCChHHHHHHHHHHhcC
Q 025154 33 QSNIKVIINGAVKEIGRAAVIAVTKAR 59 (257)
Q Consensus 33 ~~~ikV~V~Ga~GrMG~~i~~~i~~~~ 59 (257)
-.|+||.|+|++|.+|+.+++.+.+..
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~~~g 30 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVADGA 30 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHHTTT
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhcC
Confidence 357899999999999999999988653
No 267
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=95.93 E-value=0.013 Score=53.86 Aligned_cols=65 Identities=20% Similarity=0.179 Sum_probs=45.1
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
.++|+|+| +|+||+.+++.+. .-++++.+ +|+... ..... ..|+..+.++++++. .+|+|+...
T Consensus 168 g~tvGIIG-~G~IG~~vA~~l~-~~G~~V~~-~d~~~~-~~~~~------~~g~~~~~~l~ell~------~aDvV~l~~ 231 (347)
T 1mx3_A 168 GETLGIIG-LGRVGQAVALRAK-AFGFNVLF-YDPYLS-DGVER------ALGLQRVSTLQDLLF------HSDCVTLHC 231 (347)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHH-TTTCEEEE-ECTTSC-TTHHH------HHTCEECSSHHHHHH------HCSEEEECC
T ss_pred CCEEEEEe-ECHHHHHHHHHHH-HCCCEEEE-ECCCcc-hhhHh------hcCCeecCCHHHHHh------cCCEEEEcC
Confidence 46899999 5999999999876 46888764 665321 11111 234545568999986 699988765
Q ss_pred C
Q 025154 115 D 115 (257)
Q Consensus 115 ~ 115 (257)
.
T Consensus 232 P 232 (347)
T 1mx3_A 232 G 232 (347)
T ss_dssp C
T ss_pred C
Confidence 4
No 268
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=95.91 E-value=0.022 Score=49.72 Aligned_cols=32 Identities=22% Similarity=0.314 Sum_probs=26.0
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEec
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~ 69 (257)
.||.|+|+ |.+|+.+++.+.. .++.-+.++|.
T Consensus 29 ~~VlvvG~-GglG~~va~~La~-~Gvg~i~lvD~ 60 (251)
T 1zud_1 29 SQVLIIGL-GGLGTPAALYLAG-AGVGTLVLADD 60 (251)
T ss_dssp CEEEEECC-STTHHHHHHHHHH-TTCSEEEEECC
T ss_pred CcEEEEcc-CHHHHHHHHHHHH-cCCCeEEEEeC
Confidence 58999996 9999999998874 57766667774
No 269
>1vjp_A MYO-inositol-1-phosphate synthase-related protein; TM1419, structural genomics, JCSG, PSI, protein structure initiative; HET: NAD; 1.70A {Thermotoga maritima} PDB: 3cin_A*
Probab=95.88 E-value=0.027 Score=52.58 Aligned_cols=139 Identities=13% Similarity=0.177 Sum_probs=89.8
Q ss_pred CCceEEEEcCCChHHHHHHHHHHh--cC------------------CcEEEEEEe--cCCCCcchhhhhcC----CCC--
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTK--AR------------------GMEVAGAID--SHSVGEDIGMVCDM----EQP-- 85 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~--~~------------------~~eLvg~vd--~~~~g~d~g~~~g~----~~~-- 85 (257)
-|+||.|+| -|...+.+++-+.. +. ++++|+++| .++.|+|+.+..-. ..+
T Consensus 12 ~~~~~~~~G-vGn~ASslvqGie~yk~~~~~~~Gl~~~~~~~y~~~DievvaafDVd~~KVGkdl~eai~~~pn~Vp~~l 90 (394)
T 1vjp_A 12 HMVKVLILG-QGYVASTFVAGLEKLRKGEIEPYGVPLARELPIGFEDIKIVGSYDVDRAKIGKKLSEVVKQYWNDVDSLT 90 (394)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHHHHHHTTSSCCTTCTTTTCSSSCGGGEEEEEEEECBTTTTTSBHHHHHHHHCTTCCCCS
T ss_pred heeeeEEEE-ehHHHHHHHHHHHHHHcCCCCCccccchhccCCCcCceEEEEEEeccccccCCcHHHHHhhCcCCCCccc
Confidence 389999999 59999999986642 11 279999999 45778887653311 001
Q ss_pred CCeeee-----c----------------CHHHHHhcc---ccCCCccEEEEcC------C---hH---------------
Q 025154 86 LEIPVM-----S----------------DLTMVLGSI---SQSKARAVVIDFT------D---AS--------------- 117 (257)
Q Consensus 86 ~gv~v~-----~----------------dl~~~l~~~---~~~~~~DVvIDFT------~---p~--------------- 117 (257)
.+|.|. + ++++..+++ .++.++||||... . .+
T Consensus 91 ~~V~V~~G~~ldg~~~~~~~~~~~~e~~s~~e~v~~vv~~lk~~~~DVvIn~~STE~~~p~gs~~~l~~ai~~~~~~~i~ 170 (394)
T 1vjp_A 91 SDPEIRKGVHLGSVRNLPIEAEGLEDSMTLKEAVDTLVKEWTELDPDVIVNTCTTEAFVPFGNKEDLLKAIENNDKERLT 170 (394)
T ss_dssp SCCBCEECCCTTTTTTSSCCBCCGGGSSCHHHHHHHHHHHHHHHCCSEEEECCCCCCCCCCSSHHHHHHHHHTTCTTTCC
T ss_pred CCCEEEeccccCcccccchhhhccccccchhhHHHHHHHHHHHcCCCEEEEecCccCCCCCCCHHHHHHHHhcCCCCccC
Confidence 233220 0 112222111 1235799999985 1 12
Q ss_pred hHHHHHHHHHH-----cCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCchHHHHHHHHH
Q 025154 118 TVYDNVKQATA-----FGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQA 175 (257)
Q Consensus 118 ~~~~~~~~a~~-----~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfSlGvnll~~~ 175 (257)
++.-++.+|++ .|++.|-||+.|... ...+.++++++|+|++ .--|-.|..++...
T Consensus 171 aS~~YA~AAl~~~~~~aG~~fVN~~P~~ia~-~P~~~ela~~~gvpi~-GDD~ktGqT~lks~ 231 (394)
T 1vjp_A 171 ATQVYAYAAALYANKRGGAAFVNVIPTFIAN-DPAFVELAKENNLVVF-GDDGATGATPFTAD 231 (394)
T ss_dssp HHHHHHHHHHHHHHHHTCEEEEECSSSCSTT-CHHHHHHHHHTTEEEE-CSSBSCSHHHHHHH
T ss_pred hHHHHHHHHHhhccccCCcceEecCCccccC-CHHHHHHHHHcCCCEE-ccccCCCCCchHHH
Confidence 45557788899 999999999976531 2458888888888855 55589999875444
No 270
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=95.87 E-value=0.017 Score=49.92 Aligned_cols=32 Identities=28% Similarity=0.426 Sum_probs=26.7
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEe
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (257)
|+||.|+|+ |.+|+.+++.+.+ .+.++++...
T Consensus 3 ~~~ilVtGa-G~iG~~l~~~L~~-~g~~V~~~~r 34 (286)
T 3gpi_A 3 LSKILIAGC-GDLGLELARRLTA-QGHEVTGLRR 34 (286)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHH-TTCCEEEEEC
T ss_pred CCcEEEECC-CHHHHHHHHHHHH-CCCEEEEEeC
Confidence 579999995 9999999998875 4788887654
No 271
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=95.86 E-value=0.032 Score=49.93 Aligned_cols=104 Identities=14% Similarity=0.165 Sum_probs=62.0
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhh--cC-------CCCCCeeeecCHHHHHhccccC
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVC--DM-------EQPLEIPVMSDLTMVLGSISQS 104 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~--g~-------~~~~gv~v~~dl~~~l~~~~~~ 104 (257)
.++||+|+|+ |.||..++..+.+ .+.++....+. ..+..+. |. ..+..+.++++++++
T Consensus 18 ~~~kI~IiGa-Ga~G~~~a~~L~~-~G~~V~l~~~~----~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~------- 84 (318)
T 3hwr_A 18 QGMKVAIMGA-GAVGCYYGGMLAR-AGHEVILIARP----QHVQAIEATGLRLETQSFDEQVKVSASSDPSAV------- 84 (318)
T ss_dssp --CEEEEESC-SHHHHHHHHHHHH-TTCEEEEECCH----HHHHHHHHHCEEEECSSCEEEECCEEESCGGGG-------
T ss_pred cCCcEEEECc-CHHHHHHHHHHHH-CCCeEEEEEcH----hHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHHc-------
Confidence 4789999996 9999999998874 56777655221 1111111 00 001133446677553
Q ss_pred CCccEEEEcCChHhHHHHHHHHH---HcCCCeEEeCCCCCHHHHHHHHHHh
Q 025154 105 KARAVVIDFTDASTVYDNVKQAT---AFGMRSVVYVPHIQLETVSALSAFC 152 (257)
Q Consensus 105 ~~~DVvIDFT~p~~~~~~~~~a~---~~Gi~vViGTTG~s~e~~~~L~~~a 152 (257)
.++|+||-++.+....+.+.... ..+..+|+-+.|+..++ .|.+..
T Consensus 85 ~~~D~vilavk~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~--~l~~~~ 133 (318)
T 3hwr_A 85 QGADLVLFCVKSTDTQSAALAMKPALAKSALVLSLQNGVENAD--TLRSLL 133 (318)
T ss_dssp TTCSEEEECCCGGGHHHHHHHHTTTSCTTCEEEEECSSSSHHH--HHHHHC
T ss_pred CCCCEEEEEcccccHHHHHHHHHHhcCCCCEEEEeCCCCCcHH--HHHHHc
Confidence 27999997777666655555433 34566777788998743 455443
No 272
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=95.85 E-value=0.032 Score=49.40 Aligned_cols=33 Identities=30% Similarity=0.362 Sum_probs=27.6
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEE
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (257)
.|++|.|+|++|.+|+.+++.+.+ .+.++++..
T Consensus 20 ~~~~vlVTGatG~iG~~l~~~L~~-~g~~V~~~~ 52 (333)
T 2q1w_A 20 HMKKVFITGICGQIGSHIAELLLE-RGDKVVGID 52 (333)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEE
T ss_pred CCCEEEEeCCccHHHHHHHHHHHH-CCCEEEEEE
Confidence 367999999999999999998875 478888764
No 273
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=95.84 E-value=0.041 Score=49.78 Aligned_cols=34 Identities=24% Similarity=0.169 Sum_probs=28.5
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEe
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (257)
.|+||.|+|++|.+|+.+++.+.+ .+.++++...
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r 61 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKH-EGHYVIASDW 61 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEES
T ss_pred cCCeEEEECCccHHHHHHHHHHHH-CCCeEEEEEC
Confidence 468999999999999999998875 4788887543
No 274
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=95.84 E-value=0.0099 Score=51.46 Aligned_cols=82 Identities=13% Similarity=0.136 Sum_probs=51.4
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcCC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT~ 115 (257)
|||.|+|++|.+|+.+++.+. .+.++++. ++... .. ..++.-.++++++++. .++|+||.+..
T Consensus 1 m~ilVtGatG~iG~~l~~~L~--~g~~V~~~-~r~~~------~~----~~D~~d~~~~~~~~~~----~~~d~vih~a~ 63 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA--PVGNLIAL-DVHSK------EF----CGDFSNPKGVAETVRK----LRPDVIVNAAA 63 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT--TTSEEEEE-CTTCS------SS----CCCTTCHHHHHHHHHH----HCCSEEEECCC
T ss_pred CeEEEECCCCHHHHHHHHHhh--cCCeEEEe-ccccc------cc----cccCCCHHHHHHHHHh----cCCCEEEECcc
Confidence 589999999999999999887 48888864 33210 00 1111112344556641 24999999752
Q ss_pred h------------------HhHHHHHHHHHHcCCCeE
Q 025154 116 A------------------STVYDNVKQATAFGMRSV 134 (257)
Q Consensus 116 p------------------~~~~~~~~~a~~~Gi~vV 134 (257)
+ ......++.|.+.|+.+|
T Consensus 64 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v 100 (299)
T 1n2s_A 64 HTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVV 100 (299)
T ss_dssp CCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEE
T ss_pred cCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCcEE
Confidence 1 113456677777787766
No 275
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=95.82 E-value=0.04 Score=50.49 Aligned_cols=60 Identities=17% Similarity=0.166 Sum_probs=43.1
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
.++|+|+| +|+||+.+++.+. .-++++. ++|+... . ..+...+.++++++. .+|+|+-..
T Consensus 171 gktiGIIG-lG~IG~~vA~~l~-~~G~~V~-~~dr~~~-~----------~~~~~~~~sl~ell~------~aDvVil~v 230 (340)
T 4dgs_A 171 GKRIGVLG-LGQIGRALASRAE-AFGMSVR-YWNRSTL-S----------GVDWIAHQSPVDLAR------DSDVLAVCV 230 (340)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHH-TTTCEEE-EECSSCC-T----------TSCCEECSSHHHHHH------TCSEEEECC
T ss_pred CCEEEEEC-CCHHHHHHHHHHH-HCCCEEE-EEcCCcc-c----------ccCceecCCHHHHHh------cCCEEEEeC
Confidence 46999999 5999999999876 5678876 4665311 0 123344678999996 799988554
No 276
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=95.82 E-value=0.032 Score=50.87 Aligned_cols=62 Identities=11% Similarity=0.074 Sum_probs=44.2
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
.++|+|+| +|+||+.+++.+. .-++++. ++|+... . ..++..+.++++++. .+|+|+-..
T Consensus 164 g~~vgIIG-~G~iG~~vA~~l~-~~G~~V~-~~dr~~~--~---------~~g~~~~~~l~ell~------~aDvVil~v 223 (333)
T 3ba1_A 164 GKRVGIIG-LGRIGLAVAERAE-AFDCPIS-YFSRSKK--P---------NTNYTYYGSVVELAS------NSDILVVAC 223 (333)
T ss_dssp TCCEEEEC-CSHHHHHHHHHHH-TTTCCEE-EECSSCC--T---------TCCSEEESCHHHHHH------TCSEEEECS
T ss_pred CCEEEEEC-CCHHHHHHHHHHH-HCCCEEE-EECCCch--h---------ccCceecCCHHHHHh------cCCEEEEec
Confidence 46899999 5999999999876 4678865 4665311 0 113445678999885 799998766
Q ss_pred Ch
Q 025154 115 DA 116 (257)
Q Consensus 115 ~p 116 (257)
.+
T Consensus 224 P~ 225 (333)
T 3ba1_A 224 PL 225 (333)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 277
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=95.78 E-value=0.018 Score=50.59 Aligned_cols=70 Identities=19% Similarity=0.252 Sum_probs=47.7
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
.+||+|+|+ |.||+.+++.+.+. +++ +.++++.. ..+.++. ...++.+++++++++. ++|+||..|
T Consensus 129 ~~~v~iiGa-G~~g~aia~~L~~~-g~~-V~v~~r~~--~~~~~l~---~~~g~~~~~~~~~~~~------~aDiVi~at 194 (275)
T 2hk9_A 129 EKSILVLGA-GGASRAVIYALVKE-GAK-VFLWNRTK--EKAIKLA---QKFPLEVVNSPEEVID------KVQVIVNTT 194 (275)
T ss_dssp GSEEEEECC-SHHHHHHHHHHHHH-TCE-EEEECSSH--HHHHHHT---TTSCEEECSCGGGTGG------GCSEEEECS
T ss_pred CCEEEEECc-hHHHHHHHHHHHHc-CCE-EEEEECCH--HHHHHHH---HHcCCeeehhHHhhhc------CCCEEEEeC
Confidence 368999995 99999999988765 554 44666531 1223333 2446666668877774 699999887
Q ss_pred ChHh
Q 025154 115 DAST 118 (257)
Q Consensus 115 ~p~~ 118 (257)
.+..
T Consensus 195 p~~~ 198 (275)
T 2hk9_A 195 SVGL 198 (275)
T ss_dssp STTS
T ss_pred CCCC
Confidence 6543
No 278
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=95.78 E-value=0.023 Score=49.57 Aligned_cols=87 Identities=15% Similarity=0.169 Sum_probs=49.7
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
++||.|+|++|.+|+.+++.+.+ .+.++++...+...+ + +. ..++.-.++++++++. ..+|+||.+.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~---~-~~----~~Dl~d~~~~~~~~~~----~~~d~vih~A 68 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQ-NNWHAVGCGFRRARP---K-FE----QVNLLDSNAVHHIIHD----FQPHVIVHCA 68 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHT-TTCEEEEEC--------------------------CHHHHHH----HCCSEEEECC
T ss_pred CCeEEEECCCcHHHHHHHHHHHh-CCCeEEEEccCCCCC---C-eE----EecCCCHHHHHHHHHh----hCCCEEEECC
Confidence 36899999999999999998875 578887654221100 0 10 1122223455566642 2589999875
Q ss_pred Ch------------------HhHHHHHHHHHHcCCCeE
Q 025154 115 DA------------------STVYDNVKQATAFGMRSV 134 (257)
Q Consensus 115 ~p------------------~~~~~~~~~a~~~Gi~vV 134 (257)
.. ..+...++.|.+.|..+|
T Consensus 69 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v 106 (315)
T 2ydy_A 69 AERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLI 106 (315)
T ss_dssp -------------------CHHHHHHHHHHHHHTCEEE
T ss_pred cccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEE
Confidence 32 123456777777787766
No 279
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=95.68 E-value=0.045 Score=47.92 Aligned_cols=32 Identities=25% Similarity=0.296 Sum_probs=26.8
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (257)
|+||.|+|++|.+|+.+++.+.+ .+.++++..
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~ 32 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVD-EGLSVVVVD 32 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHH-TTCEEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHh-CCCEEEEEe
Confidence 68999999999999999998875 478887754
No 280
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=95.66 E-value=0.046 Score=48.07 Aligned_cols=32 Identities=19% Similarity=0.315 Sum_probs=27.1
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (257)
+++|.|+|++|.+|+.+++.+.+ .+.++++..
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~-~G~~V~~~~ 36 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLA-HGYDVVIAD 36 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEC
T ss_pred CcEEEEecCCcHHHHHHHHHHHH-CCCcEEEEe
Confidence 57999999999999999998875 478877653
No 281
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=95.65 E-value=0.043 Score=47.09 Aligned_cols=33 Identities=15% Similarity=0.143 Sum_probs=27.3
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEe
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (257)
+||||.|+|| |.+|+.+++.+.+. +.++++...
T Consensus 4 m~~~ilVtGa-G~iG~~l~~~L~~~-g~~V~~~~r 36 (286)
T 3ius_A 4 MTGTLLSFGH-GYTARVLSRALAPQ-GWRIIGTSR 36 (286)
T ss_dssp -CCEEEEETC-CHHHHHHHHHHGGG-TCEEEEEES
T ss_pred CcCcEEEECC-cHHHHHHHHHHHHC-CCEEEEEEc
Confidence 4689999998 99999999988754 788887654
No 282
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=95.64 E-value=0.041 Score=49.03 Aligned_cols=98 Identities=10% Similarity=0.050 Sum_probs=51.8
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcCC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT~ 115 (257)
++|.|+|++|.+|+.+++.+.+....++++. ++.........+.+..-...+.-.++++++++. ..-.++|+||.+..
T Consensus 47 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~-~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~~~~d~Vih~A~ 124 (357)
T 2x6t_A 47 RMIIVTGGAGFIGSNIVKALNDKGITDILVV-DNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAG-EEFGDVEAIFHEGA 124 (357)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTTCCCEEEE-ECCSSGGGGGGTTTSCCSEEEEHHHHHHHHHTT-CCCSSCCEEEECCS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCcEEEEE-ecCCCcchhhcccCceEeeecCcHHHHHHHHhh-cccCCCCEEEECCc
Confidence 6899999999999999999886532777765 432111111111111000001111233444430 00015999998752
Q ss_pred h--------H--------hHHHHHHHHHHcCCCeEE
Q 025154 116 A--------S--------TVYDNVKQATAFGMRSVV 135 (257)
Q Consensus 116 p--------~--------~~~~~~~~a~~~Gi~vVi 135 (257)
+ + .+...++.|.+.|+.+|.
T Consensus 125 ~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~r~V~ 160 (357)
T 2x6t_A 125 CSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLY 160 (357)
T ss_dssp CCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEE
T ss_pred ccCCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 1 1 234566777777876663
No 283
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=95.61 E-value=0.065 Score=46.48 Aligned_cols=31 Identities=23% Similarity=0.347 Sum_probs=26.4
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (257)
|||.|+|++|.+|+.+++.+.+ .+.++++..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~ 31 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVE-LGYEVVVVD 31 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHh-CCCEEEEEe
Confidence 5899999999999999999875 578877653
No 284
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=95.58 E-value=0.031 Score=49.12 Aligned_cols=32 Identities=16% Similarity=0.199 Sum_probs=27.0
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (257)
|+||.|+|++|.+|+.+++.+.+ .+.++++..
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~-~g~~V~~~~ 32 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALS-QGIDLIVFD 32 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHH-TTCEEEEEE
T ss_pred CcEEEEeCCCchhHHHHHHHHHh-CCCEEEEEe
Confidence 67999999999999999998875 578887654
No 285
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=95.56 E-value=0.042 Score=48.90 Aligned_cols=104 Identities=13% Similarity=0.092 Sum_probs=59.6
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCC-----CCC---CeeeecCHHHHHhccccCCC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDME-----QPL---EIPVMSDLTMVLGSISQSKA 106 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~-----~~~---gv~v~~dl~~~l~~~~~~~~ 106 (257)
+|||+|+|+ |.||..++..+.+ .+.++. ++++... +.+.+ .|.. ... .+.+++++++ + ..
T Consensus 2 ~mkI~IiGa-GaiG~~~a~~L~~-~g~~V~-~~~r~~~-~~i~~-~g~~~~~~~g~~~~~~~~~~~~~~~-~------~~ 69 (312)
T 3hn2_A 2 SLRIAIVGA-GALGLYYGALLQR-SGEDVH-FLLRRDY-EAIAG-NGLKVFSINGDFTLPHVKGYRAPEE-I------GP 69 (312)
T ss_dssp --CEEEECC-STTHHHHHHHHHH-TSCCEE-EECSTTH-HHHHH-TCEEEEETTCCEEESCCCEESCHHH-H------CC
T ss_pred CCEEEEECc-CHHHHHHHHHHHH-CCCeEE-EEEcCcH-HHHHh-CCCEEEcCCCeEEEeeceeecCHHH-c------CC
Confidence 479999996 9999999988875 456655 3444321 11110 0100 000 2344677765 3 37
Q ss_pred ccEEEEcCChHhHHHHHHHH---HHcCCCeEEeCCCCCHHHHHHHHHHh
Q 025154 107 RAVVIDFTDASTVYDNVKQA---TAFGMRSVVYVPHIQLETVSALSAFC 152 (257)
Q Consensus 107 ~DVvIDFT~p~~~~~~~~~a---~~~Gi~vViGTTG~s~e~~~~L~~~a 152 (257)
+|+||-++.+....+.+... +..+..+|+-.-|+..+ +.|.+..
T Consensus 70 ~D~vilavk~~~~~~~l~~l~~~l~~~~~iv~l~nGi~~~--~~l~~~~ 116 (312)
T 3hn2_A 70 MDLVLVGLKTFANSRYEELIRPLVEEGTQILTLQNGLGNE--EALATLF 116 (312)
T ss_dssp CSEEEECCCGGGGGGHHHHHGGGCCTTCEEEECCSSSSHH--HHHHHHT
T ss_pred CCEEEEecCCCCcHHHHHHHHhhcCCCCEEEEecCCCCcH--HHHHHHC
Confidence 99999787666555444443 34456677777799753 2455543
No 286
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=95.56 E-value=0.019 Score=52.49 Aligned_cols=68 Identities=13% Similarity=0.041 Sum_probs=45.4
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
..+|+|+| .|+||+.+++.+...-++++. ++|+... ...... ..++...+++++++. .+|+|+...
T Consensus 163 g~~vgIIG-~G~IG~~vA~~l~~~~G~~V~-~~d~~~~--~~~~~~----~~g~~~~~~l~ell~------~aDvVil~v 228 (348)
T 2w2k_A 163 GHVLGAVG-LGAIQKEIARKAVHGLGMKLV-YYDVAPA--DAETEK----ALGAERVDSLEELAR------RSDCVSVSV 228 (348)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCCEEE-EECSSCC--CHHHHH----HHTCEECSSHHHHHH------HCSEEEECC
T ss_pred CCEEEEEE-ECHHHHHHHHHHHHhcCCEEE-EECCCCc--chhhHh----hcCcEEeCCHHHHhc------cCCEEEEeC
Confidence 46899999 599999999987625678876 4665321 111111 224445568888885 699999776
Q ss_pred Ch
Q 025154 115 DA 116 (257)
Q Consensus 115 ~p 116 (257)
.+
T Consensus 229 p~ 230 (348)
T 2w2k_A 229 PY 230 (348)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 287
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=95.53 E-value=0.033 Score=53.16 Aligned_cols=38 Identities=21% Similarity=0.231 Sum_probs=29.2
Q ss_pred CCCCCCCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEec
Q 025154 29 TNPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (257)
Q Consensus 29 ~~~~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~ 69 (257)
+.|+..+.||+|+|+ |.||..++..++ ..+++++. +|.
T Consensus 48 ~~~~~~i~kVaVIGa-G~MG~~IA~~la-~aG~~V~l-~D~ 85 (460)
T 3k6j_A 48 NSEAYDVNSVAIIGG-GTMGKAMAICFG-LAGIETFL-VVR 85 (460)
T ss_dssp SCCCCCCCEEEEECC-SHHHHHHHHHHH-HTTCEEEE-ECS
T ss_pred cCCcccCCEEEEECC-CHHHHHHHHHHH-HCCCeEEE-EEC
Confidence 444555789999995 999999998877 45888764 564
No 288
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=95.50 E-value=0.14 Score=42.71 Aligned_cols=32 Identities=31% Similarity=0.363 Sum_probs=26.3
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCc--EEEEEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGM--EVAGAI 67 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~--eLvg~v 67 (257)
+++|.|+|++|.+|+.+++.+.+. +. ++++..
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~-G~~~~V~~~~ 51 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQ-GLFSKVTLIG 51 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHH-TCCSEEEEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHcC-CCCCEEEEEE
Confidence 358999999999999999998865 55 777654
No 289
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=95.49 E-value=0.068 Score=47.46 Aligned_cols=32 Identities=22% Similarity=0.193 Sum_probs=27.5
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (257)
|++|.|+|++|.+|+.+++.+.+. +.++++..
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~ 58 (352)
T 1sb8_A 27 PKVWLITGVAGFIGSNLLETLLKL-DQKVVGLD 58 (352)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHHC-CCEEEEEe
Confidence 579999999999999999988754 78887654
No 290
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=95.47 E-value=0.14 Score=45.74 Aligned_cols=35 Identities=14% Similarity=0.176 Sum_probs=29.6
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhc-CCcEEEEEEe
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKA-RGMEVAGAID 68 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~-~~~eLvg~vd 68 (257)
.+++|.|+|++|.+|+.+++.+.+. .+.++++...
T Consensus 9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r 44 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDK 44 (362)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEEC
Confidence 3579999999999999999998864 6899887653
No 291
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=95.43 E-value=0.063 Score=47.40 Aligned_cols=34 Identities=18% Similarity=0.310 Sum_probs=28.0
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEe
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (257)
..|+|.|+|++|.+|+.+++.+.+ .+.++++...
T Consensus 19 ~~~~vlVTGasG~iG~~l~~~L~~-~g~~V~~~~r 52 (330)
T 2pzm_A 19 SHMRILITGGAGCLGSNLIEHWLP-QGHEILVIDN 52 (330)
T ss_dssp TCCEEEEETTTSHHHHHHHHHHGG-GTCEEEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH-CCCEEEEEEC
Confidence 347999999999999999998875 4788876543
No 292
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=95.43 E-value=0.028 Score=55.47 Aligned_cols=96 Identities=13% Similarity=0.125 Sum_probs=59.4
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCC----------------CCcchhh-----hhcCCCCCCeee--e
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS----------------VGEDIGM-----VCDMEQPLEIPV--M 91 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~----------------~g~d~g~-----~~g~~~~~gv~v--~ 91 (257)
..||+|+|+ |..|..+++.++. .|+.=+.++|... .|+.-.+ +..+ ..++.+ +
T Consensus 326 ~arVLIVGa-GGLGs~vA~~La~-aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~i--NP~V~v~~~ 401 (615)
T 4gsl_A 326 NTKVLLLGA-GTLGCYVSRALIA-WGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRI--FPLMDATGV 401 (615)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHH-TTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHH--CTTCEEEEE
T ss_pred CCeEEEECC-CHHHHHHHHHHHH-cCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhh--CCCcEEEEe
Confidence 358999996 9999999998875 5776667788421 1111000 1111 012221 1
Q ss_pred c---------------------CHHHHHhccccCCCccEEEEcCC-hHhHHHHHHHHHHcCCCeEEeCCCC
Q 025154 92 S---------------------DLTMVLGSISQSKARAVVIDFTD-ASTVYDNVKQATAFGMRSVVYVPHI 140 (257)
Q Consensus 92 ~---------------------dl~~~l~~~~~~~~~DVvIDFT~-p~~~~~~~~~a~~~Gi~vViGTTG~ 140 (257)
. ++++++. ++|+|||.|. +++-...-..|.++++|+|.+..||
T Consensus 402 ~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~------~~DlVvd~tDn~~tR~~ln~~c~~~~~PlI~aalG~ 466 (615)
T 4gsl_A 402 KLSIPMIGHKLVNEEAQHKDFDRLRALIK------EHDIIFLLVDSRESRWLPSLLSNIENKTVINAALGF 466 (615)
T ss_dssp CCCCCCTTCCCSCHHHHHHHHHHHHHHHH------HCSEEEECCSSGGGTHHHHHHHHHTTCEEEEEEECS
T ss_pred eccccccCccccchhhhcCCHHHHHHHhh------cCCEEEecCCCHHHHHHHHHHHHHcCCeEEEEEccc
Confidence 1 2334453 6899999884 5555667788889999988765454
No 293
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=95.42 E-value=0.081 Score=50.11 Aligned_cols=34 Identities=29% Similarity=0.417 Sum_probs=26.7
Q ss_pred CCCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEec
Q 025154 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (257)
Q Consensus 33 ~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~ 69 (257)
..++||+|+|+ |.||..++..++ ..+++++ ++|.
T Consensus 35 ~~~~kV~VIGa-G~MG~~iA~~la-~~G~~V~-l~D~ 68 (463)
T 1zcj_A 35 QPVSSVGVLGL-GTMGRGIAISFA-RVGISVV-AVES 68 (463)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHH-TTTCEEE-EECS
T ss_pred CCCCEEEEECc-CHHHHHHHHHHH-hCCCeEE-EEEC
Confidence 34679999996 999999998876 4678865 4564
No 294
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=95.42 E-value=0.023 Score=51.07 Aligned_cols=100 Identities=10% Similarity=0.105 Sum_probs=61.5
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcCC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT~ 115 (257)
|||.|+||+|.+|+.+++.+.+....+++. +|.. .+ .++++++++ ++|+||.+..
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~-~d~~---~d---------------~~~l~~~~~------~~d~Vih~a~ 55 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFE-VHRQ---TK---------------EEELESALL------KADFIVHLAG 55 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEE-CCTT---CC---------------HHHHHHHHH------HCSEEEECCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEE-ECCC---CC---------------HHHHHHHhc------cCCEEEECCc
Confidence 689999999999999999998765446664 3321 11 123455664 6899998642
Q ss_pred --------------hHhHHHHHHHHHHcCCC--eE-EeCCC---CC-----HHHH-HHHHHHhhhcCceEE
Q 025154 116 --------------ASTVYDNVKQATAFGMR--SV-VYVPH---IQ-----LETV-SALSAFCDKASMGCL 160 (257)
Q Consensus 116 --------------p~~~~~~~~~a~~~Gi~--vV-iGTTG---~s-----~e~~-~~L~~~a~~~gipvl 160 (257)
...+...++.|.+.|+. +| +.|.+ .+ .-.. +.+++++++.|+++.
T Consensus 56 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ 126 (369)
T 3st7_A 56 VNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQDNPYGESKLQGEQLLREYAEEYGNTVY 126 (369)
T ss_dssp SBCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGSCSHHHHHHHHHHHHHHHHHHHHCCCEE
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcCCCCchHHHHHHHHHHHHHHHHhCCCEE
Confidence 22345677888888855 55 33321 11 1112 235666666666654
No 295
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=95.38 E-value=0.021 Score=52.41 Aligned_cols=92 Identities=14% Similarity=0.088 Sum_probs=58.6
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcC-CCCCC--eeeecCHHHHHhccccCCCccEEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDM-EQPLE--IPVMSDLTMVLGSISQSKARAVVI 111 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~-~~~~g--v~v~~dl~~~l~~~~~~~~~DVvI 111 (257)
..+|+|+|+ |.||+.+++.+....+.+-+.++++.. ..+..+... ....+ +.+++++++++. ++|+||
T Consensus 129 ~~~v~iIGa-G~~a~~~a~al~~~~~~~~V~V~~r~~--~~a~~la~~~~~~~g~~~~~~~~~~eav~------~aDiVi 199 (350)
T 1x7d_A 129 ARKMALIGN-GAQSEFQALAFHKHLGIEEIVAYDTDP--LATAKLIANLKEYSGLTIRRASSVAEAVK------GVDIIT 199 (350)
T ss_dssp CCEEEEECC-STTHHHHHHHHHHHSCCCEEEEECSSH--HHHHHHHHHHTTCTTCEEEECSSHHHHHT------TCSEEE
T ss_pred CCeEEEECC-cHHHHHHHHHHHHhCCCcEEEEEcCCH--HHHHHHHHHHHhccCceEEEeCCHHHHHh------cCCEEE
Confidence 468999995 999999998876666677788888641 112222210 00114 456789999885 799999
Q ss_pred EcCChHhHHHHH-HHHHHcCCCeEE
Q 025154 112 DFTDASTVYDNV-KQATAFGMRSVV 135 (257)
Q Consensus 112 DFT~p~~~~~~~-~~a~~~Gi~vVi 135 (257)
-.|......+.+ ..+++.|.+++.
T Consensus 200 ~aTps~~~~pvl~~~~l~~G~~V~~ 224 (350)
T 1x7d_A 200 TVTADKAYATIITPDMLEPGMHLNA 224 (350)
T ss_dssp ECCCCSSEEEEECGGGCCTTCEEEE
T ss_pred EeccCCCCCceecHHHcCCCCEEEE
Confidence 877543211111 235678888874
No 296
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=95.34 E-value=0.048 Score=51.88 Aligned_cols=33 Identities=27% Similarity=0.390 Sum_probs=28.6
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEe
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (257)
||||.|+|++|.+|+.+++.+.+ .+.++++...
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~-~G~~V~~l~R 179 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQT-GGHEVIQLVR 179 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHH-TTCEEEEEES
T ss_pred CCEEEEECCCCHHHHHHHHHHHH-CCCEEEEEEC
Confidence 78999999999999999998875 4788887654
No 297
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=95.34 E-value=0.14 Score=44.95 Aligned_cols=33 Identities=12% Similarity=0.188 Sum_probs=28.3
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEe
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (257)
++||.|+|++|.+|+.+++.+.+ .+.++++...
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~-~G~~V~~~~r 41 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQ-KGYAVNTTVR 41 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHH-TTCEEEEEES
T ss_pred CCEEEEECCchHHHHHHHHHHHH-CCCEEEEEEc
Confidence 57899999999999999998875 5888887654
No 298
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=95.34 E-value=0.0051 Score=53.60 Aligned_cols=107 Identities=11% Similarity=0.078 Sum_probs=60.7
Q ss_pred eEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcCCh
Q 025154 37 KVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDA 116 (257)
Q Consensus 37 kV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT~p 116 (257)
||+|+|+ |+||+.+++.+.+. +++ +.++++.. ..+.++.. ..+.. +++++++ . ++|+||-.|.+
T Consensus 118 ~v~iiG~-G~~g~~~a~~l~~~-g~~-v~v~~r~~--~~~~~l~~---~~~~~-~~~~~~~-~------~~Divi~~tp~ 181 (263)
T 2d5c_A 118 PALVLGA-GGAGRAVAFALREA-GLE-VWVWNRTP--QRALALAE---EFGLR-AVPLEKA-R------EARLLVNATRV 181 (263)
T ss_dssp CEEEECC-SHHHHHHHHHHHHT-TCC-EEEECSSH--HHHHHHHH---HHTCE-ECCGGGG-G------GCSEEEECSST
T ss_pred eEEEECC-cHHHHHHHHHHHHC-CCE-EEEEECCH--HHHHHHHH---Hhccc-hhhHhhc-c------CCCEEEEccCC
Confidence 8999995 99999999988754 555 45666531 11222221 12333 4577666 5 69999988865
Q ss_pred HhHH---HHH-HHHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccC
Q 025154 117 STVY---DNV-KQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPT 164 (257)
Q Consensus 117 ~~~~---~~~-~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gipvl~spN 164 (257)
..+. ..+ ..+++.|..++ -.. +++.+. ++.+.+++.|+.++ ++
T Consensus 182 ~~~~~~~~~l~~~~l~~g~~vi-D~~-~~p~~t-~l~~~a~~~g~~~v--~g 228 (263)
T 2d5c_A 182 GLEDPSASPLPAELFPEEGAAV-DLV-YRPLWT-RFLREAKAKGLKVQ--TG 228 (263)
T ss_dssp TTTCTTCCSSCGGGSCSSSEEE-ESC-CSSSSC-HHHHHHHHTTCEEE--CS
T ss_pred CCCCCCCCCCCHHHcCCCCEEE-Eee-cCCccc-HHHHHHHHCcCEEE--Cc
Confidence 5321 111 23345565443 322 222222 36666777777554 55
No 299
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=95.33 E-value=0.2 Score=45.17 Aligned_cols=71 Identities=15% Similarity=0.142 Sum_probs=43.2
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCc-EEEEEEecCCC---C--cchhhhhc-CCCCCCeeeecCHHHHHhccccCCC
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDSHSV---G--EDIGMVCD-MEQPLEIPVMSDLTMVLGSISQSKA 106 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~-eLvg~vd~~~~---g--~d~g~~~g-~~~~~gv~v~~dl~~~l~~~~~~~~ 106 (257)
.++||+|+|+ |.||..++..++.. ++ + +..+|.... | .+....+. ......+..+.|+ +.+. +
T Consensus 3 ~~~kI~VIGa-G~vG~~ia~~la~~-g~~~-v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~------~ 72 (322)
T 1t2d_A 3 PKAKIVLVGS-GMIGGVMATLIVQK-NLGD-VVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLA------G 72 (322)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHT-TCCE-EEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGT------T
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhC-CCCe-EEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhC------C
Confidence 3579999997 99999999887754 55 7 777885321 0 11111100 0012235556788 5563 7
Q ss_pred ccEEEEcC
Q 025154 107 RAVVIDFT 114 (257)
Q Consensus 107 ~DVvIDFT 114 (257)
+|+||...
T Consensus 73 aD~Vi~a~ 80 (322)
T 1t2d_A 73 ADVVIVTA 80 (322)
T ss_dssp CSEEEECC
T ss_pred CCEEEEeC
Confidence 99988653
No 300
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=95.33 E-value=0.11 Score=49.69 Aligned_cols=136 Identities=13% Similarity=0.137 Sum_probs=81.5
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecC-----CCCc---chhhhhc-----------CCCCC-CeeeecCH
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH-----SVGE---DIGMVCD-----------MEQPL-EIPVMSDL 94 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~-----~~g~---d~g~~~g-----------~~~~~-gv~v~~dl 94 (257)
..||+|.| .|.+|+..++.+. +.+.++|++.|+. ..|- ++..+.. ....+ +....+ .
T Consensus 252 g~~vaVqG-~GnVG~~~a~~L~-~~GakvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~~~~~~~~~a~~v~-~ 328 (470)
T 2bma_A 252 KQTAVVSG-SGNVALYCVQKLL-HLNVKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIKEYLNHSSTAKYFP-N 328 (470)
T ss_dssp GCEEEEEC-SSHHHHHHHHHHH-HTTCEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGGGGGGTCSSCEECS-S
T ss_pred CCEEEEEC-CcHHHHHHHHHHH-HCCCEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHHHhhcCCcEEec-C
Confidence 36899999 5999999999876 4699999999942 3354 3322211 00000 222222 1
Q ss_pred HHHHhccccCCCccEEEEcCChHhH-HHHHHHHHHcCCCeEEeCC--CCCHHHHHHHHHHhhhcCceEEEccCchH---H
Q 025154 95 TMVLGSISQSKARAVVIDFTDASTV-YDNVKQATAFGMRSVVYVP--HIQLETVSALSAFCDKASMGCLIAPTLSI---G 168 (257)
Q Consensus 95 ~~~l~~~~~~~~~DVvIDFT~p~~~-~~~~~~a~~~Gi~vViGTT--G~s~e~~~~L~~~a~~~gipvl~spNfSl---G 168 (257)
++++. .++||+|-+..+... .+++...++++..+|++-- .+++|..+.| +++| |++.|-+.. |
T Consensus 329 ~~~~~-----~~~DI~iPcA~~~~I~~~na~~l~~~~ak~V~EgAN~p~T~eA~~~L----~~rG--Il~~PD~~aNAGG 397 (470)
T 2bma_A 329 EKPWG-----VPCTLAFPCATQNDVDLDQAKLLQKNGCILVGEGANMPSTVDAINLF----KSNN--IIYCPSKAANAGG 397 (470)
T ss_dssp CCTTS-----SCCSEEEECSSTTCBCSHHHHHHHHTTCCEEECCSSSCBCHHHHHHH----HHTT--CEEECHHHHTTHH
T ss_pred cCeee-----cCccEEEeccccCcCCHHHHHHHHhcCcEEEEeCCCCCCCHHHHHHH----HHCC--cEEEChHHhhCCC
Confidence 34554 489999998765444 6788888889999999865 3455543333 3334 555554442 6
Q ss_pred HHH--HHHHHHHhcCCCCC
Q 025154 169 SIL--LQQAAISASFHYKN 185 (257)
Q Consensus 169 vnl--l~~~a~~l~~~~~D 185 (257)
|.. ++ ..+.+....|+
T Consensus 398 V~~S~~E-~~qn~~~~~w~ 415 (470)
T 2bma_A 398 VAISGLE-MSQNFQFSHWT 415 (470)
T ss_dssp HHHHHHH-HHHHHTTCCCC
T ss_pred ceeeHHH-hhccccccCCC
Confidence 654 33 33344444554
No 301
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=95.32 E-value=0.12 Score=47.44 Aligned_cols=91 Identities=21% Similarity=0.266 Sum_probs=44.7
Q ss_pred eccccccccccCccccccCCCCCCCceEEEEcCCChHHHHHHHHHHhcCCc------EEEEEEecCC-----CCc--chh
Q 025154 11 RMHHISQNVKAKRFISCSTNPPQSNIKVIINGAVKEIGRAAVIAVTKARGM------EVAGAIDSHS-----VGE--DIG 77 (257)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~------eLvg~vd~~~-----~g~--d~g 77 (257)
|.||---+++++.+ .+...+++||+|+||+|.+|+.++-+++..+=+ +| ..+|.+. .|. |+.
T Consensus 4 ~~~~~~~~~~~~~~----~~~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL-~L~Di~~~~~~~~Gva~DL~ 78 (345)
T 4h7p_A 4 HHHHHMGTLEAQTQ----GPGSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVEL-RLLDIEPALKALAGVEAELE 78 (345)
T ss_dssp ----------------------CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEE-EEECCGGGHHHHHHHHHHHH
T ss_pred cccccccccccccc----CCCCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEE-EEECCCCccccchhhhhhhh
Confidence 34444456666632 222345689999999999999999877654422 34 4677421 111 111
Q ss_pred hhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEc
Q 025154 78 MVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (257)
Q Consensus 78 ~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDF 113 (257)
... ......+.++++..+.+. ++||||--
T Consensus 79 ~~~-~~~~~~~~~~~~~~~a~~------~advVvi~ 107 (345)
T 4h7p_A 79 DCA-FPLLDKVVVTADPRVAFD------GVAIAIMC 107 (345)
T ss_dssp HTT-CTTEEEEEEESCHHHHTT------TCSEEEEC
T ss_pred hcC-ccCCCcEEEcCChHHHhC------CCCEEEEC
Confidence 111 101123556788888884 89988854
No 302
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=95.28 E-value=0.07 Score=50.69 Aligned_cols=136 Identities=14% Similarity=0.070 Sum_probs=77.1
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecC-----CCCcchhhhhcCCCCCC----e--eeecCHHHHHhcccc
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH-----SVGEDIGMVCDMEQPLE----I--PVMSDLTMVLGSISQ 103 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~-----~~g~d~g~~~g~~~~~g----v--~v~~dl~~~l~~~~~ 103 (257)
..||+|.| .|.+|+..++.+.+ .+.+++++.|+. ..|-|..++.......+ . ..+-+.++++.
T Consensus 235 g~~vaVqG-fGnVG~~~a~~L~e-~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~i~~y~~a~~i~~~ei~~---- 308 (440)
T 3aog_A 235 GARVAIQG-FGNVGNAAARAFHD-HGARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFGGVRGYPKAEPLPAADFWG---- 308 (440)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHH-TTCEEEEEECSSCEEECTTCCCHHHHHHHHHHTSSSTTCTTSEECCHHHHTT----
T ss_pred CCEEEEec-cCHHHHHHHHHHHH-CCCEEEEEEcCCcEEECCCCCCHHHHHHHHHhcCCcccCCCceEcCchhhhc----
Confidence 36899999 59999999998764 689999999953 23445443321100011 0 01224567775
Q ss_pred CCCccEEEEcCChHhH-HHHHHHHHHcCCCeEEeCC--CCCHHHHHHHHHHhhhcCceEE--EccCchHHHHH-HHHHHH
Q 025154 104 SKARAVVIDFTDASTV-YDNVKQATAFGMRSVVYVP--HIQLETVSALSAFCDKASMGCL--IAPTLSIGSIL-LQQAAI 177 (257)
Q Consensus 104 ~~~~DVvIDFT~p~~~-~~~~~~a~~~Gi~vViGTT--G~s~e~~~~L~~~a~~~gipvl--~spNfSlGvnl-l~~~a~ 177 (257)
.++||+|.++.+... .+++. +.+..+|++-- .++++..+.| +++|+.++ +..|-. ||.+ -.+..+
T Consensus 309 -~~~DIlvPcA~~n~i~~~na~---~l~ak~VvEgAN~p~t~eA~~iL----~~~GI~~~PD~~aNaG-GV~vS~~E~~q 379 (440)
T 3aog_A 309 -LPVEFLVPAALEKQITEQNAW---RIRARIVAEGANGPTTPAADDIL----LEKGVLVVPDVIANAG-GVTVSYFEWVQ 379 (440)
T ss_dssp -CCCSEEEECSSSSCBCTTTGG---GCCCSEEECCSSSCBCHHHHHHH----HHHTCEEECHHHHTTH-HHHHHHHHHHH
T ss_pred -CCCcEEEecCCcCccchhhHH---HcCCcEEEecCccccCHHHHHHH----HHCCCEEEChHHHhCC-CceEEEEEEEe
Confidence 489999998764433 23332 44888888765 3455443333 23344443 333433 6654 122333
Q ss_pred HhcCCCCC
Q 025154 178 SASFHYKN 185 (257)
Q Consensus 178 ~l~~~~~D 185 (257)
-+....|+
T Consensus 380 N~~~~~w~ 387 (440)
T 3aog_A 380 DFNSYFWT 387 (440)
T ss_dssp HTTTCCCC
T ss_pred cCccCcCC
Confidence 44444554
No 303
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=95.24 E-value=0.067 Score=48.36 Aligned_cols=97 Identities=15% Similarity=0.069 Sum_probs=55.0
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCC-cEEEEEEecCCCCcchhhhhcCCCCCCeee---ecCHHHHHhccccCCCccEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARG-MEVAGAIDSHSVGEDIGMVCDMEQPLEIPV---MSDLTMVLGSISQSKARAVV 110 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~-~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v---~~dl~~~l~~~~~~~~~DVv 110 (257)
+|||+|+||+|.+|..++..+....- .+|+. +|....-..+.++.....+..+.. ++|+++++. ++|+|
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l-~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~------gaDvV 80 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHL-YDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALT------GMDLI 80 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEE-EESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHT------TCSEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEE-EeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcC------CCCEE
Confidence 58999999889999999988775421 45554 774321001112221100112222 336777774 79998
Q ss_pred EEcC-C---h------------HhHHHHHHHHHHcCCC-eEEeCC
Q 025154 111 IDFT-D---A------------STVYDNVKQATAFGMR-SVVYVP 138 (257)
Q Consensus 111 IDFT-~---p------------~~~~~~~~~a~~~Gi~-vViGTT 138 (257)
|-.. . | +.+.+.++.+.+++.+ +|+=.|
T Consensus 81 i~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S 125 (326)
T 1smk_A 81 IVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS 125 (326)
T ss_dssp EECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred EEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence 8653 1 2 3445666777777643 444344
No 304
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=95.20 E-value=0.032 Score=50.02 Aligned_cols=71 Identities=10% Similarity=-0.004 Sum_probs=42.8
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcc--hhhhhcC----CCCCCeeeecCHHHHHhccccCCCcc
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGED--IGMVCDM----EQPLEIPVMSDLTMVLGSISQSKARA 108 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d--~g~~~g~----~~~~gv~v~~dl~~~l~~~~~~~~~D 108 (257)
++||+|+|+ |.||..++..+....-++ +..+|....-.+ +.++... .....+..++|+ +.+. ++|
T Consensus 2 ~~kI~VIGa-G~vG~~~a~~la~~g~~~-v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~------~aD 72 (309)
T 1ur5_A 2 RKKISIIGA-GFVGSTTAHWLAAKELGD-IVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTA------NSD 72 (309)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCSE-EEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGT------TCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCe-EEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHC------CCC
Confidence 479999997 999999998887654347 777885321000 1111110 012234445787 4553 799
Q ss_pred EEEEcC
Q 025154 109 VVIDFT 114 (257)
Q Consensus 109 VvIDFT 114 (257)
+||...
T Consensus 73 ~Vi~a~ 78 (309)
T 1ur5_A 73 VIVVTS 78 (309)
T ss_dssp EEEECC
T ss_pred EEEEcC
Confidence 988653
No 305
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=95.14 E-value=0.075 Score=45.85 Aligned_cols=92 Identities=12% Similarity=0.108 Sum_probs=51.6
Q ss_pred eEEEEcCCChHHHHHHHHHHhcCC-cEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCC----CccEEE
Q 025154 37 KVIINGAVKEIGRAAVIAVTKARG-MEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSK----ARAVVI 111 (257)
Q Consensus 37 kV~V~Ga~GrMG~~i~~~i~~~~~-~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~----~~DVvI 111 (257)
||.|+|++|.+|+.+++.+.+. + .++++. ++.........+.+..-...+.-.++++++++ . ++|+||
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~-g~~~V~~~-~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-----~~~~~~~d~vi 73 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDK-GITDILVV-DNLKDGTKFVNLVDLNIADYMDKEDFLIQIMA-----GEEFGDVEAIF 73 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTT-TCCCEEEE-ECCSSGGGGHHHHTSCCSEEEEHHHHHHHHHT-----TCCCSSCCEEE
T ss_pred CEEEEcCccHHHHHHHHHHHHC-CCcEEEEE-ccCCCCchhhhcCcceeccccccHHHHHHHHh-----ccccCCCcEEE
Confidence 5899999999999999998865 5 777765 43211111111211100001111123344443 2 499999
Q ss_pred EcCC--------hH--------hHHHHHHHHHHcCCCeEE
Q 025154 112 DFTD--------AS--------TVYDNVKQATAFGMRSVV 135 (257)
Q Consensus 112 DFT~--------p~--------~~~~~~~~a~~~Gi~vVi 135 (257)
.+.. ++ .....++.|.+.|+.+|.
T Consensus 74 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~ 113 (310)
T 1eq2_A 74 HEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLY 113 (310)
T ss_dssp ECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEE
T ss_pred ECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 8752 11 234567777788877663
No 306
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=95.14 E-value=0.02 Score=52.05 Aligned_cols=65 Identities=22% Similarity=0.202 Sum_probs=43.7
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
.++|+|+| .|+||+.+++.+. .-++++. ++|+... .+.. . ..|+.. .++++++. .+|+|+...
T Consensus 146 g~~vgIIG-~G~iG~~vA~~l~-~~G~~V~-~~d~~~~-~~~~--~----~~g~~~-~~l~e~l~------~aDiVil~v 208 (333)
T 2d0i_A 146 GKKVGILG-MGAIGKAIARRLI-PFGVKLY-YWSRHRK-VNVE--K----ELKARY-MDIDELLE------KSDIVILAL 208 (333)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHG-GGTCEEE-EECSSCC-HHHH--H----HHTEEE-CCHHHHHH------HCSEEEECC
T ss_pred cCEEEEEc-cCHHHHHHHHHHH-HCCCEEE-EECCCcc-hhhh--h----hcCcee-cCHHHHHh------hCCEEEEcC
Confidence 46899999 5999999999876 4578875 4665321 1111 1 234443 48888885 699999776
Q ss_pred Ch
Q 025154 115 DA 116 (257)
Q Consensus 115 ~p 116 (257)
.+
T Consensus 209 p~ 210 (333)
T 2d0i_A 209 PL 210 (333)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 307
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=95.13 E-value=0.015 Score=53.90 Aligned_cols=109 Identities=7% Similarity=0.116 Sum_probs=63.7
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcCC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT~ 115 (257)
.+|+|+|+ |+||+.+++.+. ..+++++ +.|+.. ..+.+++. .++... -+.++++. .++||+|-...
T Consensus 174 ktV~V~G~-G~VG~~~A~~L~-~~GakVv-v~D~~~--~~l~~~a~---~~ga~~-v~~~~ll~-----~~~DIvip~a~ 239 (364)
T 1leh_A 174 LAVSVQGL-GNVAKALCKKLN-TEGAKLV-VTDVNK--AAVSAAVA---EEGADA-VAPNAIYG-----VTCDIFAPCAL 239 (364)
T ss_dssp CEEEEECC-SHHHHHHHHHHH-HTTCEEE-EECSCH--HHHHHHHH---HHCCEE-CCGGGTTT-----CCCSEEEECSC
T ss_pred CEEEEECc-hHHHHHHHHHHH-HCCCEEE-EEcCCH--HHHHHHHH---HcCCEE-EChHHHhc-----cCCcEeeccch
Confidence 58999995 999999999887 4588988 788531 11222221 123222 24456664 37999887654
Q ss_pred hHhH-HHHHHHHHHcCCCeEEeCCCC--CHHHHHHHHHHhhhcCceEEEccCch
Q 025154 116 ASTV-YDNVKQATAFGMRSVVYVPHI--QLETVSALSAFCDKASMGCLIAPTLS 166 (257)
Q Consensus 116 p~~~-~~~~~~a~~~Gi~vViGTTG~--s~e~~~~L~~~a~~~gipvl~spNfS 166 (257)
.... .+++ ...|..+|++++.. +.++ ..++.++.| +++.|-+.
T Consensus 240 ~~~I~~~~~---~~lg~~iV~e~An~p~t~~e---a~~~L~~~G--i~~~Pd~~ 285 (364)
T 1leh_A 240 GAVLNDFTI---PQLKAKVIAGSADNQLKDPR---HGKYLHELG--IVYAPDYV 285 (364)
T ss_dssp SCCBSTTHH---HHCCCSEECCSCSCCBSSHH---HHHHHHHHT--CEECCHHH
T ss_pred HHHhCHHHH---HhCCCcEEEeCCCCCcccHH---HHHHHHhCC--CEEeccee
Confidence 4332 2233 23488899887743 2222 333345544 46666554
No 308
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=95.13 E-value=0.11 Score=46.80 Aligned_cols=33 Identities=21% Similarity=0.257 Sum_probs=27.3
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (257)
.|+|.|+|++|.+|+.+++.+.+..+.++++..
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~ 34 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVD 34 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEe
Confidence 469999999999999999988724578888654
No 309
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=95.12 E-value=0.021 Score=52.89 Aligned_cols=36 Identities=25% Similarity=0.416 Sum_probs=28.0
Q ss_pred CCCCCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEe
Q 025154 31 PPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (257)
Q Consensus 31 ~~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (257)
|+..++||+|+|+ ||+||.+.+++.+. ++++|++=|
T Consensus 17 ~~~~~~kVaInGf-GrIGr~vlr~l~e~-~~~ivaInd 52 (356)
T 3hja_A 17 QGPGSMKLAINGF-GRIGRNVFKIAFER-GIDIVAIND 52 (356)
T ss_dssp -----CEEEEECC-SHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred cCCCCeEEEEECC-CHHHHHHHHHHHHC-CCCEEEEeC
Confidence 3445689999997 99999999988876 899998865
No 310
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=95.12 E-value=0.16 Score=44.92 Aligned_cols=32 Identities=28% Similarity=0.333 Sum_probs=27.7
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (257)
|||.|+|++|.+|+.+++.+.+..+.++++..
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~ 32 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNID 32 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEE
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEe
Confidence 58999999999999999999876578887654
No 311
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=95.12 E-value=0.081 Score=46.60 Aligned_cols=33 Identities=18% Similarity=0.187 Sum_probs=26.4
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCC------cEEEEEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARG------MEVAGAI 67 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~------~eLvg~v 67 (257)
+|+|.|+|++|.+|+.+++.+.+... .++++..
T Consensus 14 ~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~ 52 (342)
T 2hrz_A 14 GMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLID 52 (342)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEE
Confidence 57999999999999999999886531 6776543
No 312
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=95.07 E-value=0.23 Score=43.48 Aligned_cols=32 Identities=19% Similarity=0.194 Sum_probs=26.8
Q ss_pred ceEEEEcCCChHHHHHHHHHHhc--CC---cEEEEEE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKA--RG---MEVAGAI 67 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~--~~---~eLvg~v 67 (257)
|||.|+|++|.+|+.+++.+.+. ++ .++++..
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~ 37 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLD 37 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEE
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEE
Confidence 58999999999999999998864 26 7887654
No 313
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=95.05 E-value=0.13 Score=46.36 Aligned_cols=115 Identities=10% Similarity=0.137 Sum_probs=63.5
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeee-e-c---C---HHHHHhccccCCC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-M-S---D---LTMVLGSISQSKA 106 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v-~-~---d---l~~~l~~~~~~~~ 106 (257)
+++|.|+|++|.+|+.+++.+.+ .+.++++...+.. ......+.. ..++.+ . | | +.++++ .
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~R~~~-~~~~~~l~~---~~~v~~v~~D~l~d~~~l~~~~~------~ 73 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAA-VGHHVRAQVHSLK-GLIAEELQA---IPNVTLFQGPLLNNVPLMDTLFE------G 73 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHH-TTCCEEEEESCSC-SHHHHHHHT---STTEEEEESCCTTCHHHHHHHHT------T
T ss_pred CCEEEEECCCCHHHHHHHHHHHh-CCCEEEEEECCCC-hhhHHHHhh---cCCcEEEECCccCCHHHHHHHHh------c
Confidence 46899999999999999998875 5788877553221 111111211 112221 1 2 3 344553 6
Q ss_pred ccEEEEcCCh------HhHHHHHHHHHHcC-C-CeEE-eCCC--C------C--HHHHHHHHHHhhhcCceEE
Q 025154 107 RAVVIDFTDA------STVYDNVKQATAFG-M-RSVV-YVPH--I------Q--LETVSALSAFCDKASMGCL 160 (257)
Q Consensus 107 ~DVvIDFT~p------~~~~~~~~~a~~~G-i-~vVi-GTTG--~------s--~e~~~~L~~~a~~~gipvl 160 (257)
+|+||..+.. ......+..|.+.| + .+|. .+.+ . + .......+++.+..|+++.
T Consensus 74 ~d~Vi~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~~~~~~~~~~~~y~~sK~~~E~~~~~~gi~~~ 146 (352)
T 1xgk_A 74 AHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPST 146 (352)
T ss_dssp CSEEEECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHHHTSSSCEE
T ss_pred CCEEEEcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCccccccCCCCCccHHHHHHHHHHHHHHcCCCEE
Confidence 8998875532 22345667777888 5 4553 3322 0 0 0223445666666566544
No 314
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=95.03 E-value=0.027 Score=49.02 Aligned_cols=32 Identities=28% Similarity=0.403 Sum_probs=27.9
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEe
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (257)
|||.|+|++|-+|+.+++.+.+ .++++++...
T Consensus 1 MkILVTGatGfIG~~L~~~L~~-~G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNA-RGHEVTLVSR 32 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHH-CCCEEEEEEC
Confidence 7999999999999999998874 5899887653
No 315
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=95.03 E-value=0.095 Score=46.94 Aligned_cols=66 Identities=21% Similarity=0.306 Sum_probs=39.8
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcC-CCC--CCeeeecCHHHHHhccccCCCccEEEE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDM-EQP--LEIPVMSDLTMVLGSISQSKARAVVID 112 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~-~~~--~gv~v~~dl~~~l~~~~~~~~~DVvID 112 (257)
.||+|+|+ |.||..+++.++ .+++++ ++|... ..+...... .+. .++...+|+++ +. ++|+||.
T Consensus 13 ~~V~vIG~-G~MG~~iA~~la--aG~~V~-v~d~~~--~~~~~~~~~l~~~~~~~i~~~~~~~~-~~------~aDlVie 79 (293)
T 1zej_A 13 MKVFVIGA-GLMGRGIAIAIA--SKHEVV-LQDVSE--KALEAAREQIPEELLSKIEFTTTLEK-VK------DCDIVME 79 (293)
T ss_dssp CEEEEECC-SHHHHHHHHHHH--TTSEEE-EECSCH--HHHHHHHHHSCGGGGGGEEEESSCTT-GG------GCSEEEE
T ss_pred CeEEEEee-CHHHHHHHHHHH--cCCEEE-EEECCH--HHHHHHHHHHHHHHhCCeEEeCCHHH-Hc------CCCEEEE
Confidence 58999995 999999999887 688865 566431 001111000 000 14555667765 43 5788776
Q ss_pred cC
Q 025154 113 FT 114 (257)
Q Consensus 113 FT 114 (257)
..
T Consensus 80 av 81 (293)
T 1zej_A 80 AV 81 (293)
T ss_dssp CC
T ss_pred cC
Confidence 64
No 316
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=95.00 E-value=0.18 Score=44.14 Aligned_cols=33 Identities=18% Similarity=0.295 Sum_probs=27.5
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcC-CcEEEEEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKAR-GMEVAGAI 67 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~-~~eLvg~v 67 (257)
+|||.|+|++|.+|+.+++.+.+.. +.++++..
T Consensus 3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~ 36 (336)
T 2hun_A 3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINID 36 (336)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEe
Confidence 3689999999999999999988764 58887654
No 317
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.99 E-value=0.21 Score=47.34 Aligned_cols=129 Identities=11% Similarity=0.072 Sum_probs=71.0
Q ss_pred cCCCCC-CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecC-------CCCc------chhhhhcC-CCCCCeeeec
Q 025154 28 STNPPQ-SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH-------SVGE------DIGMVCDM-EQPLEIPVMS 92 (257)
Q Consensus 28 ~~~~~~-~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~-------~~g~------d~g~~~g~-~~~~gv~v~~ 92 (257)
+.-|.. .|-+|+|+| +|-||--++..++ +.+++++| +|.. ..|+ ...+++.. -......+++
T Consensus 13 ~~~p~~~~m~~IaViG-lGYVGLp~A~~~A-~~G~~V~g-~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt 89 (444)
T 3vtf_A 13 GLVPRGSHMASLSVLG-LGYVGVVHAVGFA-LLGHRVVG-YDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAE 89 (444)
T ss_dssp CCCCTTCCCCEEEEEC-CSHHHHHHHHHHH-HHTCEEEE-ECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECS
T ss_pred CcCCCCCCCCEEEEEc-cCHHHHHHHHHHH-hCCCcEEE-EECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEc
Confidence 344443 367999999 6999998887666 45888876 5632 1111 11111100 0022356678
Q ss_pred CHHHHHhccccCCCccEEEEcC-Ch------------HhHHHHHHHHHH---cCCCeEEeCC---CCCHHHHHH-HHHHh
Q 025154 93 DLTMVLGSISQSKARAVVIDFT-DA------------STVYDNVKQATA---FGMRSVVYVP---HIQLETVSA-LSAFC 152 (257)
Q Consensus 93 dl~~~l~~~~~~~~~DVvIDFT-~p------------~~~~~~~~~a~~---~Gi~vViGTT---G~s~e~~~~-L~~~a 152 (257)
|+++++. .+|++|-.- +| ..+.+.+...++ .|.=||+.+| |.+++-... +++..
T Consensus 90 ~~~~ai~------~ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~~~~ 163 (444)
T 3vtf_A 90 SAEEAVA------ATDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAVAEEA 163 (444)
T ss_dssp SHHHHHH------TSSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHHHTTT
T ss_pred CHHHHHh------cCCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHHHHhC
Confidence 8888775 689877552 22 223333333343 2445666666 777654433 33333
Q ss_pred hhcCceEEEccCc
Q 025154 153 DKASMGCLIAPTL 165 (257)
Q Consensus 153 ~~~gipvl~spNf 165 (257)
......+.++|=|
T Consensus 164 ~~~~f~v~~~PEr 176 (444)
T 3vtf_A 164 GGVKFSVASNPEF 176 (444)
T ss_dssp TTCCCEEEECCCC
T ss_pred CCCCceeecCccc
Confidence 2223667777765
No 318
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=94.98 E-value=0.092 Score=46.26 Aligned_cols=32 Identities=22% Similarity=0.261 Sum_probs=27.0
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (257)
+++|.|+|++|.+|+.+++.+.+ .+.++++..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~ 33 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLE-AGYLPVVID 33 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHH-TTCCEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHH-CCCEEEEEe
Confidence 46899999999999999998875 478887654
No 319
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=94.97 E-value=0.095 Score=47.88 Aligned_cols=91 Identities=13% Similarity=0.095 Sum_probs=56.1
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecC----------------CCCcchh-----hhhcCCCCCCeee--e-
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH----------------SVGEDIG-----MVCDMEQPLEIPV--M- 91 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~----------------~~g~d~g-----~~~g~~~~~gv~v--~- 91 (257)
.||.|+|+ |..|..+++.+.. .|+.=+.++|.. ..|+.-. .+..+ ...+.+ +
T Consensus 37 ~~VlivG~-GGlG~~ia~~La~-~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~l--np~v~v~~~~ 112 (346)
T 1y8q_A 37 SRVLLVGL-KGLGAEIAKNLIL-AGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNL--NPMVDVKVDT 112 (346)
T ss_dssp CEEEEECC-SHHHHHHHHHHHH-HTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHT--CTTSEEEEEC
T ss_pred CeEEEECC-CHHHHHHHHHHHH-cCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhH--CCCeEEEEEe
Confidence 48999996 9999999999874 466555677632 1111110 11111 112222 2
Q ss_pred cC----HHHHHhccccCCCccEEEEcCC-hHhHHHHHHHHHHcCCCeEEe
Q 025154 92 SD----LTMVLGSISQSKARAVVIDFTD-ASTVYDNVKQATAFGMRSVVY 136 (257)
Q Consensus 92 ~d----l~~~l~~~~~~~~~DVvIDFT~-p~~~~~~~~~a~~~Gi~vViG 136 (257)
.+ .++.+. .+|+|||.+. ++.-...-..|.++++|+|.+
T Consensus 113 ~~~~~~~~~~~~------~~dvVv~~~d~~~~r~~ln~~~~~~~ip~i~~ 156 (346)
T 1y8q_A 113 EDIEKKPESFFT------QFDAVCLTCCSRDVIVKVDQICHKNSIKFFTG 156 (346)
T ss_dssp SCGGGCCHHHHT------TCSEEEEESCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cccCcchHHHhc------CCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 12 245553 7899999874 455566668888899999865
No 320
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=94.97 E-value=0.031 Score=55.09 Aligned_cols=32 Identities=28% Similarity=0.355 Sum_probs=26.2
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEec
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~ 69 (257)
.||.|+|+ |..|..+++.++ ..|+.=+.++|.
T Consensus 328 ~kVLIVGa-GGLGs~va~~La-~aGVG~ItLvD~ 359 (598)
T 3vh1_A 328 TKVLLLGA-GTLGCYVSRALI-AWGVRKITFVDN 359 (598)
T ss_dssp CEEEEECC-SHHHHHHHHHHH-TTTCCEEEEECC
T ss_pred CeEEEECC-CHHHHHHHHHHH-HcCCCEEEEECC
Confidence 58999996 999999999887 457766667773
No 321
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=94.96 E-value=0.14 Score=45.90 Aligned_cols=68 Identities=21% Similarity=0.255 Sum_probs=41.0
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCc--EEEEEEecCC--CCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccE
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGM--EVAGAIDSHS--VGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAV 109 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~--eLvg~vd~~~--~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DV 109 (257)
.|+||+|+|+ |.||..++..+... ++ +|+ .+|... .|. +.++.... ...+..+.|+ +.+. ++|+
T Consensus 13 ~~~kV~ViGa-G~vG~~~a~~l~~~-g~~~ev~-L~Di~~~~~g~-a~dl~~~~-~~~i~~t~d~-~~l~------~aD~ 80 (303)
T 2i6t_A 13 TVNKITVVGG-GELGIACTLAISAK-GIADRLV-LLDLSEGTKGA-TMDLEIFN-LPNVEISKDL-SASA------HSKV 80 (303)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHH-TCCSEEE-EECCC-----C-HHHHHHHT-CTTEEEESCG-GGGT------TCSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhc-CCCCEEE-EEcCCcchHHH-HHHHhhhc-CCCeEEeCCH-HHHC------CCCE
Confidence 3689999996 99999999887644 44 444 567432 111 11222111 1256667888 4453 7999
Q ss_pred EEEc
Q 025154 110 VIDF 113 (257)
Q Consensus 110 vIDF 113 (257)
||..
T Consensus 81 Vi~a 84 (303)
T 2i6t_A 81 VIFT 84 (303)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 8865
No 322
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=94.92 E-value=0.087 Score=48.28 Aligned_cols=92 Identities=16% Similarity=0.212 Sum_probs=55.2
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCC------------cchhh---------hhcCCCCCCeeeec--
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVG------------EDIGM---------VCDMEQPLEIPVMS-- 92 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g------------~d~g~---------~~g~~~~~gv~v~~-- 92 (257)
-||.|+|+ |..|..+++.++. .++.=+.++|..... .|+|. +..+.....+..+.
T Consensus 119 ~~VlvvG~-GglGs~va~~La~-aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~ 196 (353)
T 3h5n_A 119 AKVVILGC-GGIGNHVSVILAT-SGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIALN 196 (353)
T ss_dssp CEEEEECC-SHHHHHHHHHHHH-HTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEECC
T ss_pred CeEEEECC-CHHHHHHHHHHHh-CCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEeecc
Confidence 58999996 9999999998875 466556677743110 11110 00000011121111
Q ss_pred -----CHHHHHhccccCCCccEEEEcCC-hH-hHHHHHHHHHHcCCCeEEe
Q 025154 93 -----DLTMVLGSISQSKARAVVIDFTD-AS-TVYDNVKQATAFGMRSVVY 136 (257)
Q Consensus 93 -----dl~~~l~~~~~~~~~DVvIDFT~-p~-~~~~~~~~a~~~Gi~vViG 136 (257)
++++ + .++|+|||.+. ++ .-...-..|.++|+|+|.+
T Consensus 197 i~~~~~~~~-~------~~~DlVvd~~Dn~~~~r~~ln~~c~~~~~p~i~~ 240 (353)
T 3h5n_A 197 INDYTDLHK-V------PEADIWVVSADHPFNLINWVNKYCVRANQPYINA 240 (353)
T ss_dssp CCSGGGGGG-S------CCCSEEEECCCCSTTHHHHHHHHHHHTTCCEEEE
T ss_pred cCchhhhhH-h------ccCCEEEEecCChHHHHHHHHHHHHHhCCCEEEE
Confidence 1333 4 37999999884 44 4555668899999999965
No 323
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=94.87 E-value=0.18 Score=42.65 Aligned_cols=30 Identities=20% Similarity=0.310 Sum_probs=25.3
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (257)
|||.|+|++|.+|+.+++.+. . +.++++..
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~-g~~V~~~~ 30 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLS-E-RHEVIKVY 30 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHT-T-TSCEEEEE
T ss_pred CEEEEECCCChhHHHHHHHHh-c-CCeEEEec
Confidence 589999999999999999887 3 68877644
No 324
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=94.83 E-value=0.03 Score=51.52 Aligned_cols=65 Identities=14% Similarity=0.083 Sum_probs=44.8
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
-++|+|+| +|+||+.+++.+. .-++++. ++|+.. .+..... ..|+...+++++++. .+|+|+-..
T Consensus 164 gktvGIIG-~G~IG~~vA~~l~-~~G~~V~-~~dr~~--~~~~~~~----~~g~~~~~~l~ell~------~aDvV~l~~ 228 (351)
T 3jtm_A 164 GKTIGTVG-AGRIGKLLLQRLK-PFGCNLL-YHDRLQ--MAPELEK----ETGAKFVEDLNEMLP------KCDVIVINM 228 (351)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHG-GGCCEEE-EECSSC--CCHHHHH----HHCCEECSCHHHHGG------GCSEEEECS
T ss_pred CCEEeEEE-eCHHHHHHHHHHH-HCCCEEE-EeCCCc--cCHHHHH----hCCCeEcCCHHHHHh------cCCEEEECC
Confidence 46999999 5999999999876 4588865 566532 1111111 235555679999996 699988654
No 325
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=94.81 E-value=0.04 Score=47.07 Aligned_cols=32 Identities=19% Similarity=0.159 Sum_probs=26.0
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (257)
|.+|.|+|++|.+|+.+++.+.+ .+.++++..
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~ 33 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGT-LAHEVRLSD 33 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGG-TEEEEEECC
T ss_pred CceEEEECCCCHHHHHHHHHHHh-CCCEEEEEe
Confidence 45899999999999999998875 467776543
No 326
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=94.80 E-value=0.12 Score=48.85 Aligned_cols=135 Identities=13% Similarity=0.163 Sum_probs=77.4
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecC-----CCCcchhhhhcCCCCCCe------------eeecCHHHHH
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH-----SVGEDIGMVCDMEQPLEI------------PVMSDLTMVL 98 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~-----~~g~d~g~~~g~~~~~gv------------~v~~dl~~~l 98 (257)
.+|+|.| .|.||+..++.+. +.+.++|++.|+. ..|-|..++.......+. ..+.+.++++
T Consensus 211 k~vaVqG-~GnVG~~aa~~L~-e~GakVVavsD~~G~i~dp~GlD~~~l~~~k~~~g~~~v~~y~~~~~~~~~~~~~~~~ 288 (421)
T 1v9l_A 211 KTVAIQG-MGNVGRWTAYWLE-KMGAKVIAVSDINGVAYRKEGLNVELIQKNKGLTGPALVELFTTKDNAEFVKNPDAIF 288 (421)
T ss_dssp CEEEEEC-CSHHHHHHHHHHH-TTTCEEEEEECSSCEEECTTCCCTHHHHHTTTSCHHHHHHHHHHTSCCCCCSSTTGGG
T ss_pred CEEEEEC-cCHHHHHHHHHHH-HCCCEEEEEECCCcEEECCCCCCHHHHHHHHHhhCCccccccccccCceEeCCchhhh
Confidence 6899999 5999999998776 5699999999953 234454444322212221 1121335666
Q ss_pred hccccCCCccEEEEcCChHhHHHHHHHHHHcCCCeEEeCC--CCCHHHHHHHHHHhhhcCceEEEccCchH---HHHH-H
Q 025154 99 GSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVP--HIQLETVSALSAFCDKASMGCLIAPTLSI---GSIL-L 172 (257)
Q Consensus 99 ~~~~~~~~~DVvIDFT~p~~~~~~~~~a~~~Gi~vViGTT--G~s~e~~~~L~~~a~~~gipvl~spNfSl---Gvnl-l 172 (257)
. .++||++-+..+.... ...+-+.+..+|++-- .++++..+ .+.++ .|++.|-+.. ||.. -
T Consensus 289 ~-----~~~Dil~P~A~~~~I~--~~~a~~l~ak~V~EgAN~p~t~~a~~---~l~~~---Gi~~~PD~~aNaGGV~~S~ 355 (421)
T 1v9l_A 289 K-----LDVDIFVPAAIENVIR--GDNAGLVKARLVVEGANGPTTPEAER---ILYER---GVVVVPDILANAGGVIMSY 355 (421)
T ss_dssp G-----CCCSEEEECSCSSCBC--TTTTTTCCCSEEECCSSSCBCHHHHH---HHHTT---TCEEECHHHHSTHHHHHHH
T ss_pred c-----CCccEEEecCcCCccc--hhhHHHcCceEEEecCCCcCCHHHHH---HHHHC---CCEEeChHHhhCCCeeeeH
Confidence 5 4899999876544331 1222345889998865 35554332 23333 4555554432 6654 1
Q ss_pred HHHHHHhcCCCCC
Q 025154 173 QQAAISASFHYKN 185 (257)
Q Consensus 173 ~~~a~~l~~~~~D 185 (257)
.+..+-+....|+
T Consensus 356 ~E~~qn~~~~~w~ 368 (421)
T 1v9l_A 356 LEWVENLQWYIWD 368 (421)
T ss_dssp HHHHHHHTTCCCC
T ss_pred HHHHhhccccCCC
Confidence 2233444444444
No 327
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=94.79 E-value=0.027 Score=51.93 Aligned_cols=68 Identities=9% Similarity=0.097 Sum_probs=45.7
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcE-EEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEE
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGME-VAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVID 112 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~e-Lvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvID 112 (257)
...+|+|+| +|+||+.+++.+. .-+++ +. ++|+.....+ .. ...|+...+++++++. .+|+|+.
T Consensus 163 ~g~tvgIIG-~G~IG~~vA~~l~-~~G~~~V~-~~d~~~~~~~--~~----~~~g~~~~~~l~ell~------~aDvV~l 227 (364)
T 2j6i_A 163 EGKTIATIG-AGRIGYRVLERLV-PFNPKELL-YYDYQALPKD--AE----EKVGARRVENIEELVA------QADIVTV 227 (364)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHG-GGCCSEEE-EECSSCCCHH--HH----HHTTEEECSSHHHHHH------TCSEEEE
T ss_pred CCCEEEEEC-cCHHHHHHHHHHH-hCCCcEEE-EECCCccchh--HH----HhcCcEecCCHHHHHh------cCCEEEE
Confidence 346899999 5999999999876 45785 65 4664321111 11 1345555678999986 7999997
Q ss_pred cCCh
Q 025154 113 FTDA 116 (257)
Q Consensus 113 FT~p 116 (257)
....
T Consensus 228 ~~P~ 231 (364)
T 2j6i_A 228 NAPL 231 (364)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 7643
No 328
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=94.77 E-value=0.047 Score=49.38 Aligned_cols=69 Identities=22% Similarity=0.230 Sum_probs=41.0
Q ss_pred ceEEEEcCCChHHHHHHHHHHhc-CCcEEEEEEecCC--CCcchhhhhcCCCCCCeeee----cCHHHHHhccccCCCcc
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKA-RGMEVAGAIDSHS--VGEDIGMVCDMEQPLEIPVM----SDLTMVLGSISQSKARA 108 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~-~~~eLvg~vd~~~--~g~d~g~~~g~~~~~gv~v~----~dl~~~l~~~~~~~~~D 108 (257)
|||+|+||+|.+|+.++..+... +-..=+..+|... .|. +-++... +..+.+. ++..+.+. ++|
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~-a~Dl~~~--~~~~~v~~~~~~~~~~~~~------~aD 71 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGV-AVDLSHI--PTAVKIKGFSGEDATPALE------GAD 71 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHH-HHHHHTS--CSSEEEEEECSSCCHHHHT------TCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhH-HHHhhCC--CCCceEEEecCCCcHHHhC------CCC
Confidence 69999998899999999888765 4333344677542 111 1122222 2333443 24445553 799
Q ss_pred EEEEc
Q 025154 109 VVIDF 113 (257)
Q Consensus 109 VvIDF 113 (257)
++|-.
T Consensus 72 ivii~ 76 (312)
T 3hhp_A 72 VVLIS 76 (312)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 88854
No 329
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=94.70 E-value=0.08 Score=47.50 Aligned_cols=32 Identities=16% Similarity=0.239 Sum_probs=26.6
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCc-EEEEEE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGM-EVAGAI 67 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~-eLvg~v 67 (257)
++|.|+|++|.+|+.+++.+.+.++. ++++..
T Consensus 22 k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~ 54 (344)
T 2gn4_A 22 QTILITGGTGSFGKCFVRKVLDTTNAKKIIVYS 54 (344)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEE
Confidence 68999999999999999999876465 776543
No 330
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=94.64 E-value=0.065 Score=48.80 Aligned_cols=35 Identities=23% Similarity=0.290 Sum_probs=26.1
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEec
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~ 69 (257)
.++||+|+|+ |.||..++..+...+-+.=+..+|.
T Consensus 8 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~ 42 (326)
T 3vku_A 8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDI 42 (326)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 3579999996 9999999988876554433345774
No 331
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=94.63 E-value=0.072 Score=45.77 Aligned_cols=31 Identities=16% Similarity=0.213 Sum_probs=25.4
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGA 66 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~ 66 (257)
|.+|.|+|++|.+|+.+++.+.+ .+.+++..
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~-~G~~V~~~ 33 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAP-MAEILRLA 33 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGG-GEEEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHh-cCCEEEEE
Confidence 46799999999999999998875 46776644
No 332
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=94.62 E-value=0.019 Score=50.80 Aligned_cols=81 Identities=11% Similarity=0.050 Sum_probs=44.2
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
+|||+|+|+ |.||..++..+.+. +.++. ++++...+.+.....| .....+..+..+.+. ..+|+||-++
T Consensus 2 ~mkI~iiGa-Ga~G~~~a~~L~~~-g~~V~-~~~r~~~~~~~~~~~g---~~~~~~~~~~~~~~~-----~~~D~vilav 70 (294)
T 3g17_A 2 SLSVAIIGP-GAVGTTIAYELQQS-LPHTT-LIGRHAKTITYYTVPH---APAQDIVVKGYEDVT-----NTFDVIIIAV 70 (294)
T ss_dssp -CCEEEECC-SHHHHHHHHHHHHH-CTTCE-EEESSCEEEEEESSTT---SCCEEEEEEEGGGCC-----SCEEEEEECS
T ss_pred CcEEEEECC-CHHHHHHHHHHHHC-CCeEE-EEEeccCcEEEEecCC---eeccceecCchHhcC-----CCCCEEEEeC
Confidence 479999996 99999999888754 44444 3443311111110001 111233333333332 3789999888
Q ss_pred ChHhHHHHHHHH
Q 025154 115 DASTVYDNVKQA 126 (257)
Q Consensus 115 ~p~~~~~~~~~a 126 (257)
.+..+.+.+...
T Consensus 71 k~~~~~~~l~~l 82 (294)
T 3g17_A 71 KTHQLDAVIPHL 82 (294)
T ss_dssp CGGGHHHHGGGH
T ss_pred CccCHHHHHHHH
Confidence 776666555433
No 333
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=94.60 E-value=0.089 Score=46.56 Aligned_cols=32 Identities=19% Similarity=0.187 Sum_probs=26.6
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCC-----cEEEEEEe
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARG-----MEVAGAID 68 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~-----~eLvg~vd 68 (257)
+||.|+|++|.+|+.+++.+.+ .+ .++++...
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~-~g~~~~~~~V~~~~r 38 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPL-ADTPGGPWKVYGVAR 38 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTS-TTCTTCSEEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHh-CCCCCCceEEEEEeC
Confidence 6899999999999999998875 45 78776553
No 334
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=94.59 E-value=0.11 Score=46.64 Aligned_cols=33 Identities=21% Similarity=0.287 Sum_probs=26.0
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEec
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~ 69 (257)
..||.|+|+ |..|..+++.++.. ++-=+.++|.
T Consensus 36 ~~~VlVvGa-GGlGs~va~~La~a-GVG~i~lvD~ 68 (292)
T 3h8v_A 36 TFAVAIVGV-GGVGSVTAEMLTRC-GIGKLLLFDY 68 (292)
T ss_dssp GCEEEEECC-SHHHHHHHHHHHHH-TCSEEEEECC
T ss_pred CCeEEEECc-CHHHHHHHHHHHHc-CCCEEEEECC
Confidence 359999996 99999999988754 6555567774
No 335
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=94.59 E-value=0.051 Score=49.18 Aligned_cols=65 Identities=11% Similarity=0.089 Sum_probs=43.8
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
.++|+|+| +|+||+.+++.+. ..++++. ++|+... ...... ..++... ++++++. .+|+||...
T Consensus 155 g~~vgIIG-~G~iG~~iA~~l~-~~G~~V~-~~d~~~~--~~~~~~----~~g~~~~-~l~e~l~------~aDvVi~~v 218 (330)
T 2gcg_A 155 QSTVGIIG-LGRIGQAIARRLK-PFGVQRF-LYTGRQP--RPEEAA----EFQAEFV-STPELAA------QSDFIVVAC 218 (330)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHG-GGTCCEE-EEESSSC--CHHHHH----TTTCEEC-CHHHHHH------HCSEEEECC
T ss_pred CCEEEEEC-cCHHHHHHHHHHH-HCCCEEE-EECCCCc--chhHHH----hcCceeC-CHHHHHh------hCCEEEEeC
Confidence 46899999 5999999999876 4578865 4664321 111111 2345444 8888885 689998776
Q ss_pred C
Q 025154 115 D 115 (257)
Q Consensus 115 ~ 115 (257)
.
T Consensus 219 p 219 (330)
T 2gcg_A 219 S 219 (330)
T ss_dssp C
T ss_pred C
Confidence 4
No 336
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.52 E-value=0.13 Score=46.19 Aligned_cols=87 Identities=16% Similarity=0.061 Sum_probs=47.8
Q ss_pred CceEEEEcCCChHHHH-HHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeee--cCHHHHHhccccCCCccEEE
Q 025154 35 NIKVIINGAVKEIGRA-AVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVM--SDLTMVLGSISQSKARAVVI 111 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~-i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~--~dl~~~l~~~~~~~~~DVvI 111 (257)
|+||.++|. |++|.. +++.+. +.++++. +.|..........+. ..|++++ .+.+.+.+ .++|+||
T Consensus 4 ~~~i~~iGi-Gg~Gms~~A~~L~-~~G~~V~-~~D~~~~~~~~~~L~----~~gi~v~~g~~~~~l~~-----~~~d~vV 71 (326)
T 3eag_A 4 MKHIHIIGI-GGTFMGGLAAIAK-EAGFEVS-GCDAKMYPPMSTQLE----ALGIDVYEGFDAAQLDE-----FKADVYV 71 (326)
T ss_dssp CCEEEEESC-CSHHHHHHHHHHH-HTTCEEE-EEESSCCTTHHHHHH----HTTCEEEESCCGGGGGS-----CCCSEEE
T ss_pred CcEEEEEEE-CHHHHHHHHHHHH-hCCCEEE-EEcCCCCcHHHHHHH----hCCCEEECCCCHHHcCC-----CCCCEEE
Confidence 679999995 999996 776554 6788876 477532111112222 3466664 34444431 1589877
Q ss_pred EcC-ChHhHHHHHHHHHHcCCCeE
Q 025154 112 DFT-DASTVYDNVKQATAFGMRSV 134 (257)
Q Consensus 112 DFT-~p~~~~~~~~~a~~~Gi~vV 134 (257)
--+ .|.. .+.+..|.++|+|++
T Consensus 72 ~Spgi~~~-~p~~~~a~~~gi~v~ 94 (326)
T 3eag_A 72 IGNVAKRG-MDVVEAILNLGLPYI 94 (326)
T ss_dssp ECTTCCTT-CHHHHHHHHTTCCEE
T ss_pred ECCCcCCC-CHHHHHHHHcCCcEE
Confidence 432 1222 233444555555543
No 337
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=94.50 E-value=0.19 Score=47.35 Aligned_cols=136 Identities=20% Similarity=0.271 Sum_probs=77.8
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecC-----CCCcchhhhhcCCCCCC-eee-ecCHHHHHhccccCCCc
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH-----SVGEDIGMVCDMEQPLE-IPV-MSDLTMVLGSISQSKAR 107 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~-----~~g~d~g~~~g~~~~~g-v~v-~~dl~~~l~~~~~~~~~ 107 (257)
..+|+|.| .|.+|+..++.+. +.+.++|++.|+. ..|-|...+.......+ +.- .-+.++++. .++
T Consensus 218 gk~vaVqG-~GnVG~~~a~~L~-~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~g~v~~~~~~~~e~~~-----~~~ 290 (419)
T 3aoe_E 218 GARVVVQG-LGQVGAAVALHAE-RLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEATGSLPRLDLAPEEVFG-----LEA 290 (419)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHH-HTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHSSCSCCCBCTTTGGG-----SSC
T ss_pred CCEEEEEC-cCHHHHHHHHHHH-HCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHhhCCcceeeccchhhhc-----cCc
Confidence 36899999 5999999999876 4699999999962 33545443321100111 100 012245555 489
Q ss_pred cEEEEcCChHhH-HHHHHHHHHcCCCeEEeCC--CCCHHHHHHHHHHhhhcCceEEEccCchH---HHHH-HHHHHHHhc
Q 025154 108 AVVIDFTDASTV-YDNVKQATAFGMRSVVYVP--HIQLETVSALSAFCDKASMGCLIAPTLSI---GSIL-LQQAAISAS 180 (257)
Q Consensus 108 DVvIDFT~p~~~-~~~~~~a~~~Gi~vViGTT--G~s~e~~~~L~~~a~~~gipvl~spNfSl---Gvnl-l~~~a~~l~ 180 (257)
||++-++.+... .+++ .+.+..+|++-- .++++..+.| .++ .|++.|-+.. ||.. -.+..+-+.
T Consensus 291 DVliP~A~~n~i~~~~A---~~l~ak~V~EgAN~p~t~~A~~~L---~~~---Gi~~~PD~~aNaGGV~~S~~E~~qn~~ 361 (419)
T 3aoe_E 291 EVLVLAAREGALDGDRA---RQVQAQAVVEVANFGLNPEAEAYL---LGK---GALVVPDLLSGGGGLLASYLEWVQDLN 361 (419)
T ss_dssp SEEEECSCTTCBCHHHH---TTCCCSEEEECSTTCBCHHHHHHH---HHH---TCEEECHHHHTCHHHHHHHHHHHHHHH
T ss_pred eEEEecccccccccchH---hhCCceEEEECCCCcCCHHHHHHH---HHC---CCEEECHHHHhCCCchhhHHHHhhccc
Confidence 999998866544 3333 345899999865 3455443333 333 4555554432 6643 122344444
Q ss_pred CCCCCe
Q 025154 181 FHYKNV 186 (257)
Q Consensus 181 ~~~~Di 186 (257)
...|+-
T Consensus 362 ~~~w~~ 367 (419)
T 3aoe_E 362 MFFWSP 367 (419)
T ss_dssp TCCCCH
T ss_pred ccCCCH
Confidence 445543
No 338
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=94.49 E-value=0.15 Score=49.35 Aligned_cols=95 Identities=14% Similarity=0.117 Sum_probs=58.9
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCC----------------CCcchh-----hhhcCCCCCCeee---e
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS----------------VGEDIG-----MVCDMEQPLEIPV---M 91 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~----------------~g~d~g-----~~~g~~~~~gv~v---~ 91 (257)
.||.|+|+ |..|..+++.+. ..|+.=+.++|... .|+.-. .+..+ ...+.+ .
T Consensus 33 ~~VlvvG~-GGlGseiak~La-~aGVg~itlvD~D~Ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~l--Np~v~v~~~~ 108 (531)
T 1tt5_A 33 AHVCLINA-TATGTEILKNLV-LPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQEL--NSDVSGSFVE 108 (531)
T ss_dssp CEEEEECC-SHHHHHHHHHHH-TTTCSEEEEECCCBBCHHHHHHCTTCCGGGBTSBHHHHHHHHHHTT--CTTSBCCEES
T ss_pred CeEEEECc-CHHHHHHHHHHH-HcCCCeEEEEeCCEechhhcccCccCChhhcCcHHHHHHHHHHHHh--CCCCeEEEeC
Confidence 58999996 999999999987 56776667788321 121111 11111 112222 2
Q ss_pred cCHHHHHh---ccccCCCccEEEEcCC-hHhHHHHHHHHHHcCCCeEEe
Q 025154 92 SDLTMVLG---SISQSKARAVVIDFTD-ASTVYDNVKQATAFGMRSVVY 136 (257)
Q Consensus 92 ~dl~~~l~---~~~~~~~~DVvIDFT~-p~~~~~~~~~a~~~Gi~vViG 136 (257)
.+++++++ ++. ..+|+|||.+. ++.-......|.++++|+|.+
T Consensus 109 ~~~~~~~~~~~~~~--~~~DvVi~~~d~~~~r~~ln~~c~~~~iplI~~ 155 (531)
T 1tt5_A 109 ESPENLLDNDPSFF--CRFTVVVATQLPESTSLRLADVLWNSQIPLLIC 155 (531)
T ss_dssp SCHHHHHHSCGGGG--GGCSEEEEESCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCcchhhhhhHHHh--cCCCEEEEeCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 34443211 000 26899999984 555566778899999999976
No 339
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=94.48 E-value=0.18 Score=49.25 Aligned_cols=35 Identities=23% Similarity=0.177 Sum_probs=29.6
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEe
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (257)
.+++|.|+|++|.+|+.+++.+.+.++.++++...
T Consensus 314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r 348 (660)
T 1z7e_A 314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDI 348 (660)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEES
T ss_pred cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEc
Confidence 46799999999999999999988766788876543
No 340
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=94.45 E-value=0.047 Score=49.30 Aligned_cols=89 Identities=10% Similarity=0.009 Sum_probs=57.2
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcC-CCC-CCeeeecCHHHHHhccccCCCccEEEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDM-EQP-LEIPVMSDLTMVLGSISQSKARAVVID 112 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~-~~~-~gv~v~~dl~~~l~~~~~~~~~DVvID 112 (257)
..+|+|+|+ |.||+.+++.+....+.+.+.++++.. ..+.+++.. ... .++. ++++++++ + +|+||-
T Consensus 125 ~~~v~iIGa-G~~a~~~~~al~~~~~~~~V~v~~r~~--~~a~~la~~~~~~~~~~~-~~~~~e~v-~------aDvVi~ 193 (322)
T 1omo_A 125 SSVFGFIGC-GTQAYFQLEALRRVFDIGEVKAYDVRE--KAAKKFVSYCEDRGISAS-VQPAEEAS-R------CDVLVT 193 (322)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHSCCCEEEEECSSH--HHHHHHHHHHHHTTCCEE-ECCHHHHT-S------SSEEEE
T ss_pred CCEEEEEcC-cHHHHHHHHHHHHhCCccEEEEECCCH--HHHHHHHHHHHhcCceEE-ECCHHHHh-C------CCEEEE
Confidence 469999995 999999999988766788888888641 112222210 000 2345 78888876 3 899997
Q ss_pred cCChHhHHHHH-HHHHHcCCCeEEe
Q 025154 113 FTDASTVYDNV-KQATAFGMRSVVY 136 (257)
Q Consensus 113 FT~p~~~~~~~-~~a~~~Gi~vViG 136 (257)
.|.... ..+ ..+++.|++++.-
T Consensus 194 aTp~~~--pv~~~~~l~~G~~V~~i 216 (322)
T 1omo_A 194 TTPSRK--PVVKAEWVEEGTHINAI 216 (322)
T ss_dssp CCCCSS--CCBCGGGCCTTCEEEEC
T ss_pred eeCCCC--ceecHHHcCCCeEEEEC
Confidence 775321 222 2456788887743
No 341
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=94.45 E-value=0.084 Score=48.41 Aligned_cols=63 Identities=17% Similarity=0.164 Sum_probs=44.3
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
-.+|+|+| +|+||+.+++.+. .-++++.+ +|+.. .+... . .++...+++++++. .+|+|+-..
T Consensus 173 gktvGIIG-lG~IG~~vA~~l~-~~G~~V~~-~dr~~--~~~~~-~-----~g~~~~~~l~ell~------~sDvV~l~~ 235 (345)
T 4g2n_A 173 GRRLGIFG-MGRIGRAIATRAR-GFGLAIHY-HNRTR--LSHAL-E-----EGAIYHDTLDSLLG------ASDIFLIAA 235 (345)
T ss_dssp TCEEEEES-CSHHHHHHHHHHH-TTTCEEEE-ECSSC--CCHHH-H-----TTCEECSSHHHHHH------TCSEEEECS
T ss_pred CCEEEEEE-eChhHHHHHHHHH-HCCCEEEE-ECCCC--cchhh-h-----cCCeEeCCHHHHHh------hCCEEEEec
Confidence 36899999 6999999999876 45888765 66532 11111 1 14445579999996 799988655
No 342
>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A
Probab=94.43 E-value=0.54 Score=44.00 Aligned_cols=97 Identities=11% Similarity=0.087 Sum_probs=58.2
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCC-cEEEEEEecCCCCcchhhhhcCC---C----------------------CCC
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARG-MEVAGAIDSHSVGEDIGMVCDME---Q----------------------PLE 87 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~-~eLvg~vd~~~~g~d~g~~~g~~---~----------------------~~g 87 (257)
+|.||.|.|+||-+|+.....+.+.|+ +++++..... ++..+.... . ..+
T Consensus 8 ~~k~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aL~ag~----nv~~L~~q~~~f~p~~v~v~d~~~~~~L~~~l~~~~~~ 83 (406)
T 1q0q_A 8 GMKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGK----NVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSR 83 (406)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESS----CHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCC
T ss_pred CceeEEEEccCcHHHHHHHHHHHhCCCccEEEEEEcCC----CHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhcCCCC
Confidence 578999999999999999999998876 9999987632 111111000 0 012
Q ss_pred eeeecCHHHHHhccccCCCccEEEEcCChHhHHHHHHHHHHcCCCeEE
Q 025154 88 IPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVV 135 (257)
Q Consensus 88 v~v~~dl~~~l~~~~~~~~~DVvIDFT~p~~~~~~~~~a~~~Gi~vVi 135 (257)
+.++.-.+.+. ++++..++|+|+-.-.-.+-+.-...|++.|+.+-.
T Consensus 84 ~~v~~G~~~l~-~~a~~~~~D~Vv~AIvG~aGL~PTlaAi~aGK~iaL 130 (406)
T 1q0q_A 84 TEVLSGQQAAC-DMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILL 130 (406)
T ss_dssp CEEEESHHHHH-HHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEE
T ss_pred cEEEeCHHHHH-HHhcCCCCCEEEEccccHhHHHHHHHHHHCCCeEEE
Confidence 22322222221 122224578877665555555556667788888776
No 343
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Probab=94.43 E-value=0.11 Score=45.22 Aligned_cols=31 Identities=16% Similarity=0.262 Sum_probs=25.7
Q ss_pred eEEEEcCCChHHHHHHHHHHhc-CCcEEEEEE
Q 025154 37 KVIINGAVKEIGRAAVIAVTKA-RGMEVAGAI 67 (257)
Q Consensus 37 kV~V~Ga~GrMG~~i~~~i~~~-~~~eLvg~v 67 (257)
||.|+|++|.+|+.+++.+.+. .+.++++..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~ 32 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASD 32 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEE
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEec
Confidence 6899999999999999998876 467777653
No 344
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=94.42 E-value=0.075 Score=47.71 Aligned_cols=93 Identities=16% Similarity=0.197 Sum_probs=54.7
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhh--cCC-------CCCCeeeecCHHHHHhccccCC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVC--DME-------QPLEIPVMSDLTMVLGSISQSK 105 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~--g~~-------~~~gv~v~~dl~~~l~~~~~~~ 105 (257)
+|||+|+|+ |.||..++..+.+ .+.++. ++++. .....+. |.. ....+.++++++++ .
T Consensus 3 ~mkI~IiGa-G~~G~~~a~~L~~-~g~~V~-~~~r~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~------ 69 (335)
T 3ghy_A 3 LTRICIVGA-GAVGGYLGARLAL-AGEAIN-VLARG---ATLQALQTAGLRLTEDGATHTLPVRATHDAAAL-G------ 69 (335)
T ss_dssp CCCEEEESC-CHHHHHHHHHHHH-TTCCEE-EECCH---HHHHHHHHTCEEEEETTEEEEECCEEESCHHHH-C------
T ss_pred CCEEEEECc-CHHHHHHHHHHHH-CCCEEE-EEECh---HHHHHHHHCCCEEecCCCeEEEeeeEECCHHHc-C------
Confidence 579999996 9999999998875 456554 34431 1111111 000 01123446788764 3
Q ss_pred CccEEEEcCChHhHHHHHHHHH---HcCCCeEEeCCCC
Q 025154 106 ARAVVIDFTDASTVYDNVKQAT---AFGMRSVVYVPHI 140 (257)
Q Consensus 106 ~~DVvIDFT~p~~~~~~~~~a~---~~Gi~vViGTTG~ 140 (257)
++|+||-++.+....+.+.... ..+..+|+-+.|+
T Consensus 70 ~~D~Vilavk~~~~~~~~~~l~~~l~~~~~iv~~~nGi 107 (335)
T 3ghy_A 70 EQDVVIVAVKAPALESVAAGIAPLIGPGTCVVVAMNGV 107 (335)
T ss_dssp CCSEEEECCCHHHHHHHHGGGSSSCCTTCEEEECCSSS
T ss_pred CCCEEEEeCCchhHHHHHHHHHhhCCCCCEEEEECCCC
Confidence 7999997776665555444332 2355666666784
No 345
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.38 E-value=0.32 Score=38.12 Aligned_cols=121 Identities=14% Similarity=0.185 Sum_probs=64.0
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCC--cchhhhhcCCCCCCeee-e---cCHHHHHhccccCCCccE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVG--EDIGMVCDMEQPLEIPV-M---SDLTMVLGSISQSKARAV 109 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g--~d~g~~~g~~~~~gv~v-~---~dl~~~l~~~~~~~~~DV 109 (257)
.+|.|+|+ |++|+.+++.+.+ .+.+++. +|+.... +.+.+.. +.++.+ + .+.+.+.+. .-.++|+
T Consensus 4 ~~vlI~G~-G~vG~~la~~L~~-~g~~V~v-id~~~~~~~~~~~~~~----~~~~~~i~gd~~~~~~l~~a--~i~~ad~ 74 (153)
T 1id1_A 4 DHFIVCGH-SILAINTILQLNQ-RGQNVTV-ISNLPEDDIKQLEQRL----GDNADVIPGDSNDSSVLKKA--GIDRCRA 74 (153)
T ss_dssp SCEEEECC-SHHHHHHHHHHHH-TTCCEEE-EECCCHHHHHHHHHHH----CTTCEEEESCTTSHHHHHHH--TTTTCSE
T ss_pred CcEEEECC-CHHHHHHHHHHHH-CCCCEEE-EECCChHHHHHHHHhh----cCCCeEEEcCCCCHHHHHHc--ChhhCCE
Confidence 47999995 9999999998875 4677775 4442100 0111111 123322 2 222222110 0037898
Q ss_pred EEEcCChHhH-HHHHHHHHHc-C-CCeEEeCCCCCHHHHHHHHHHhhhcCceEEEccCchHHHHH
Q 025154 110 VIDFTDASTV-YDNVKQATAF-G-MRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSIL 171 (257)
Q Consensus 110 vIDFT~p~~~-~~~~~~a~~~-G-i~vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfSlGvnl 171 (257)
+|-.+..+.. ......+.+. + .++|.-..+ ++..+.+ ++.|+..+++|....+-.+
T Consensus 75 vi~~~~~d~~n~~~~~~a~~~~~~~~ii~~~~~--~~~~~~l----~~~G~~~vi~p~~~~~~~l 133 (153)
T 1id1_A 75 ILALSDNDADNAFVVLSAKDMSSDVKTVLAVSD--SKNLNKI----KMVHPDIILSPQLFGSEIL 133 (153)
T ss_dssp EEECSSCHHHHHHHHHHHHHHTSSSCEEEECSS--GGGHHHH----HTTCCSEEECHHHHHHHHH
T ss_pred EEEecCChHHHHHHHHHHHHHCCCCEEEEEECC--HHHHHHH----HHcCCCEEEcHHHHHHHHH
Confidence 8877754443 3333444454 4 455544443 2333344 4467777888877666433
No 346
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=94.35 E-value=0.23 Score=45.09 Aligned_cols=31 Identities=10% Similarity=0.172 Sum_probs=26.1
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (257)
-+|.|+|++|.+|...++++. ..+.++++..
T Consensus 166 ~~VlV~Ga~G~vG~~a~qla~-~~Ga~Vi~~~ 196 (371)
T 3gqv_A 166 VYVLVYGGSTATATVTMQMLR-LSGYIPIATC 196 (371)
T ss_dssp CEEEEESTTSHHHHHHHHHHH-HTTCEEEEEE
T ss_pred cEEEEECCCcHHHHHHHHHHH-HCCCEEEEEe
Confidence 479999998999999998765 5688888775
No 347
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=94.32 E-value=0.4 Score=43.25 Aligned_cols=70 Identities=21% Similarity=0.245 Sum_probs=42.7
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCc-EEEEEEecCCC---C--cchhhhhc-CCCCCCeeeecCHHHHHhccccCCCc
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDSHSV---G--EDIGMVCD-MEQPLEIPVMSDLTMVLGSISQSKAR 107 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~-eLvg~vd~~~~---g--~d~g~~~g-~~~~~gv~v~~dl~~~l~~~~~~~~~ 107 (257)
++||+|+|+ |.||..++..++. .++ + +..+|.... + .+...... ...+..+..++|+ +.+. ++
T Consensus 14 ~~kI~ViGa-G~vG~~iA~~la~-~g~~~-V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~------~a 83 (328)
T 2hjr_A 14 RKKISIIGA-GQIGSTIALLLGQ-KDLGD-VYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQ------NS 83 (328)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHH-TTCCE-EEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGT------TC
T ss_pred CCEEEEECC-CHHHHHHHHHHHh-CCCCe-EEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHC------CC
Confidence 369999997 9999999987765 455 7 667885421 1 01111110 0012245556788 5553 79
Q ss_pred cEEEEcC
Q 025154 108 AVVIDFT 114 (257)
Q Consensus 108 DVvIDFT 114 (257)
|+||...
T Consensus 84 D~VI~av 90 (328)
T 2hjr_A 84 DVVIITA 90 (328)
T ss_dssp SEEEECC
T ss_pred CEEEEcC
Confidence 9988764
No 348
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=94.31 E-value=0.067 Score=47.61 Aligned_cols=99 Identities=10% Similarity=0.083 Sum_probs=56.5
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecC----------HHHHHhccccC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSD----------LTMVLGSISQS 104 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~d----------l~~~l~~~~~~ 104 (257)
+|||+|+|+ |.||..++..+. .+.++.. +++.. .....+. +.|+.+..+ .++..
T Consensus 2 ~mkI~IiGa-Ga~G~~~a~~L~--~g~~V~~-~~r~~--~~~~~l~----~~G~~~~~~~~~~~~~~~~~~~~~------ 65 (307)
T 3ego_A 2 SLKIGIIGG-GSVGLLCAYYLS--LYHDVTV-VTRRQ--EQAAAIQ----SEGIRLYKGGEEFRADCSADTSIN------ 65 (307)
T ss_dssp CCEEEEECC-SHHHHHHHHHHH--TTSEEEE-ECSCH--HHHHHHH----HHCEEEEETTEEEEECCEEESSCC------
T ss_pred CCEEEEECC-CHHHHHHHHHHh--cCCceEE-EECCH--HHHHHHH----hCCceEecCCCeeccccccccccc------
Confidence 589999996 999999998877 5777664 44321 1111121 112222110 01222
Q ss_pred CCccEEEEcCChHhHHHHHHHHHHcCCC-eEEeCCCCCHHHHHHHHHH
Q 025154 105 KARAVVIDFTDASTVYDNVKQATAFGMR-SVVYVPHIQLETVSALSAF 151 (257)
Q Consensus 105 ~~~DVvIDFT~p~~~~~~~~~a~~~Gi~-vViGTTG~s~e~~~~L~~~ 151 (257)
..+|+||-++.+..+.+.+......+-. +|+-.-|+..+ +.|+++
T Consensus 66 ~~~D~vilavK~~~~~~~l~~l~~~~~~~ivs~~nGi~~~--e~l~~~ 111 (307)
T 3ego_A 66 SDFDLLVVTVKQHQLQSVFSSLERIGKTNILFLQNGMGHI--HDLKDW 111 (307)
T ss_dssp SCCSEEEECCCGGGHHHHHHHTTSSCCCEEEECCSSSHHH--HHHHTC
T ss_pred CCCCEEEEEeCHHHHHHHHHHhhcCCCCeEEEecCCccHH--HHHHHh
Confidence 3789999888777776666554332211 66666788754 245544
No 349
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=94.31 E-value=0.072 Score=50.93 Aligned_cols=32 Identities=19% Similarity=0.238 Sum_probs=25.4
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEec
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~ 69 (257)
+.||+|+|+ |.||..++..++. .+++++ ++|.
T Consensus 5 ~~kVgVIGa-G~MG~~IA~~la~-aG~~V~-l~D~ 36 (483)
T 3mog_A 5 VQTVAVIGS-GTMGAGIAEVAAS-HGHQVL-LYDI 36 (483)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHH-TTCCEE-EECS
T ss_pred CCEEEEECc-CHHHHHHHHHHHH-CCCeEE-EEEC
Confidence 458999995 9999999998774 578765 4664
No 350
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=94.30 E-value=0.13 Score=45.96 Aligned_cols=32 Identities=22% Similarity=0.306 Sum_probs=27.1
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEe
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (257)
++|.|+|++|.+|+.+++.+.+ .+.++++...
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r 56 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLE-KGYEVHGIVR 56 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEEEEC
T ss_pred cEEEEECCCchHHHHHHHHHHH-CCCEEEEEEC
Confidence 5899999999999999998876 4788887553
No 351
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=94.29 E-value=0.059 Score=50.09 Aligned_cols=90 Identities=20% Similarity=0.263 Sum_probs=52.7
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCc-EEEEEEecCCCCcchhhhhcCCCCCCeee--ecCHHHHHhccccCCCccEEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDSHSVGEDIGMVCDMEQPLEIPV--MSDLTMVLGSISQSKARAVVI 111 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~-eLvg~vd~~~~g~d~g~~~g~~~~~gv~v--~~dl~~~l~~~~~~~~~DVvI 111 (257)
..+|+|+|+ |.||+.+++.+... ++ +++ ++++.. ..+.+++. .+|..+ ++++++++. .+|+||
T Consensus 167 g~~VlIiGa-G~iG~~~a~~l~~~-G~~~V~-v~~r~~--~ra~~la~---~~g~~~~~~~~l~~~l~------~aDvVi 232 (404)
T 1gpj_A 167 DKTVLVVGA-GEMGKTVAKSLVDR-GVRAVL-VANRTY--ERAVELAR---DLGGEAVRFDELVDHLA------RSDVVV 232 (404)
T ss_dssp TCEEEEESC-CHHHHHHHHHHHHH-CCSEEE-EECSSH--HHHHHHHH---HHTCEECCGGGHHHHHH------TCSEEE
T ss_pred CCEEEEECh-HHHHHHHHHHHHHC-CCCEEE-EEeCCH--HHHHHHHH---HcCCceecHHhHHHHhc------CCCEEE
Confidence 358999996 99999999988754 66 554 556431 11112221 122222 457777774 799999
Q ss_pred EcCChHh-H--HHHHHH-HHH---cCCCeEEeCC
Q 025154 112 DFTDAST-V--YDNVKQ-ATA---FGMRSVVYVP 138 (257)
Q Consensus 112 DFT~p~~-~--~~~~~~-a~~---~Gi~vViGTT 138 (257)
+.|.... . .+.+.. +++ .+.-++++..
T Consensus 233 ~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia 266 (404)
T 1gpj_A 233 SATAAPHPVIHVDDVREALRKRDRRSPILIIDIA 266 (404)
T ss_dssp ECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECC
T ss_pred EccCCCCceecHHHHHHHHHhccCCCCEEEEEcc
Confidence 9984222 1 144444 343 3555667754
No 352
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=94.28 E-value=0.17 Score=47.58 Aligned_cols=37 Identities=16% Similarity=0.214 Sum_probs=30.8
Q ss_pred CCCCceEEEEcCCChHHHHHHHHHHhcC--CcEEEEEEe
Q 025154 32 PQSNIKVIINGAVKEIGRAAVIAVTKAR--GMEVAGAID 68 (257)
Q Consensus 32 ~~~~ikV~V~Ga~GrMG~~i~~~i~~~~--~~eLvg~vd 68 (257)
...+++|.|+|++|.+|+.+++.+.+.+ +.++++...
T Consensus 70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R 108 (478)
T 4dqv_A 70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVR 108 (478)
T ss_dssp CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 3457899999999999999999998765 678887664
No 353
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=94.23 E-value=0.14 Score=44.66 Aligned_cols=80 Identities=21% Similarity=0.257 Sum_probs=50.3
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCcc-EEEEcC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VvIDFT 114 (257)
.++.|+|++|.+|+.+++.+.+ .+.+++. +++.. ....++. +.+. ..+. +..|.|
T Consensus 30 k~vlVTGas~gIG~aia~~la~-~G~~V~~-~~r~~--~~~~~~~---------------~~~~-----~~~~~~~~Dv~ 85 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLAD-EGCHVLC-ADIDG--DAADAAA---------------TKIG-----CGAAACRVDVS 85 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHHH-TTCEEEE-EESSH--HHHHHHH---------------HHHC-----SSCEEEECCTT
T ss_pred CEEEEECCCcHHHHHHHHHHHH-CCCEEEE-EeCCH--HHHHHHH---------------HHcC-----CcceEEEecCC
Confidence 4689999999999999998875 5787764 44321 1111110 1111 1222 446888
Q ss_pred ChHhHHHHHHHHHHc--CCCeEEeCCC
Q 025154 115 DASTVYDNVKQATAF--GMRSVVYVPH 139 (257)
Q Consensus 115 ~p~~~~~~~~~a~~~--Gi~vViGTTG 139 (257)
.++...+.+..+.+. ++.+|+-..|
T Consensus 86 d~~~v~~~~~~~~~~~g~iD~lvnnAg 112 (277)
T 3gvc_A 86 DEQQIIAMVDACVAAFGGVDKLVANAG 112 (277)
T ss_dssp CHHHHHHHHHHHHHHHSSCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 888888777766554 6888876654
No 354
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=94.23 E-value=0.068 Score=46.76 Aligned_cols=66 Identities=20% Similarity=0.259 Sum_probs=43.2
Q ss_pred eEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcCC
Q 025154 37 KVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (257)
Q Consensus 37 kV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT~ 115 (257)
||+|+|+ |.||+.++..+.. .+.+=+-++++.. ..+.+++ ..++...++++++.+. ++|+||..|+
T Consensus 110 ~vliiGa-Gg~a~ai~~~L~~-~G~~~I~v~nR~~--~ka~~la---~~~~~~~~~~~~~~~~------~aDiVInatp 175 (253)
T 3u62_A 110 PVVVVGA-GGAARAVIYALLQ-MGVKDIWVVNRTI--ERAKALD---FPVKIFSLDQLDEVVK------KAKSLFNTTS 175 (253)
T ss_dssp SEEEECC-SHHHHHHHHHHHH-TTCCCEEEEESCH--HHHHTCC---SSCEEEEGGGHHHHHH------TCSEEEECSS
T ss_pred eEEEECc-HHHHHHHHHHHHH-cCCCEEEEEeCCH--HHHHHHH---HHcccCCHHHHHhhhc------CCCEEEECCC
Confidence 8999996 9999999998875 4563344566531 1222232 2334334567777775 7999998774
No 355
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=94.23 E-value=0.23 Score=45.09 Aligned_cols=30 Identities=27% Similarity=0.434 Sum_probs=24.5
Q ss_pred eEEEEcCCChHHHHHHHHHHhcCCcEEEEEEec
Q 025154 37 KVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (257)
Q Consensus 37 kV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~ 69 (257)
||+|+|+ |-||+.|+...+ ..+++++ ++|.
T Consensus 8 ~VaViGa-G~MG~giA~~~a-~~G~~V~-l~D~ 37 (319)
T 3ado_A 8 DVLIVGS-GLVGRSWAMLFA-SGGFRVK-LYDI 37 (319)
T ss_dssp EEEEECC-SHHHHHHHHHHH-HTTCCEE-EECS
T ss_pred eEEEECC-cHHHHHHHHHHH-hCCCeEE-EEEC
Confidence 8999996 999999998766 5688866 5664
No 356
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=94.18 E-value=0.14 Score=44.59 Aligned_cols=33 Identities=21% Similarity=0.408 Sum_probs=26.9
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEE
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (257)
++++|.|+|++|.+|+.+++.+.+ .+.++++..
T Consensus 11 ~~~~vlVTGatG~iG~~l~~~L~~-~G~~V~~~~ 43 (321)
T 2pk3_A 11 GSMRALITGVAGFVGKYLANHLTE-QNVEVFGTS 43 (321)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHH-TTCEEEEEE
T ss_pred CcceEEEECCCChHHHHHHHHHHH-CCCEEEEEe
Confidence 467999999999999999998875 478888744
No 357
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=94.17 E-value=0.19 Score=44.69 Aligned_cols=72 Identities=19% Similarity=0.148 Sum_probs=40.9
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCC-cEEEEEEecCC--C-C--cchhhhhcCCCCCCeee-ecCHHHHHhccccCCCc
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARG-MEVAGAIDSHS--V-G--EDIGMVCDMEQPLEIPV-MSDLTMVLGSISQSKAR 107 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~-~eLvg~vd~~~--~-g--~d~g~~~g~~~~~gv~v-~~dl~~~l~~~~~~~~~ 107 (257)
||||+|+|+ |.||..++..+....- .+++ .+|... . + .+....... ....+.+ +.|+ +.+. ++
T Consensus 1 m~kI~VIGa-G~~G~~la~~L~~~g~~~~V~-l~d~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~d~-~~~~------~a 70 (309)
T 1hyh_A 1 ARKIGIIGL-GNVGAAVAHGLIAQGVADDYV-FIDANEAKVKADQIDFQDAMAN-LEAHGNIVINDW-AALA------DA 70 (309)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCSEEE-EECSSHHHHHHHHHHHHHHGGG-SSSCCEEEESCG-GGGT------TC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCEEE-EEcCCHHHHHHHHHHHHhhhhh-cCCCeEEEeCCH-HHhC------CC
Confidence 579999995 9999999998875531 3444 566431 0 0 011100000 0112344 4677 5553 79
Q ss_pred cEEEEcCCh
Q 025154 108 AVVIDFTDA 116 (257)
Q Consensus 108 DVvIDFT~p 116 (257)
|+||-...+
T Consensus 71 DvViiav~~ 79 (309)
T 1hyh_A 71 DVVISTLGN 79 (309)
T ss_dssp SEEEECCSC
T ss_pred CEEEEecCC
Confidence 999876643
No 358
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=94.17 E-value=0.059 Score=48.51 Aligned_cols=64 Identities=22% Similarity=0.165 Sum_probs=43.5
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
..+|+|+| +|+||+.+++.+. .-++++. ++|+.. ... ... ..|+.. .++++++. .+|+|+...
T Consensus 142 g~~vgIIG-~G~IG~~~A~~l~-~~G~~V~-~~d~~~--~~~-~~~----~~g~~~-~~l~ell~------~aDvVvl~~ 204 (313)
T 2ekl_A 142 GKTIGIVG-FGRIGTKVGIIAN-AMGMKVL-AYDILD--IRE-KAE----KINAKA-VSLEELLK------NSDVISLHV 204 (313)
T ss_dssp TCEEEEES-CSHHHHHHHHHHH-HTTCEEE-EECSSC--CHH-HHH----HTTCEE-CCHHHHHH------HCSEEEECC
T ss_pred CCEEEEEe-eCHHHHHHHHHHH-HCCCEEE-EECCCc--chh-HHH----hcCcee-cCHHHHHh------hCCEEEEec
Confidence 46899999 5999999999877 4578876 466532 111 111 234443 48888885 689988765
Q ss_pred C
Q 025154 115 D 115 (257)
Q Consensus 115 ~ 115 (257)
.
T Consensus 205 P 205 (313)
T 2ekl_A 205 T 205 (313)
T ss_dssp C
T ss_pred c
Confidence 3
No 359
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=94.16 E-value=0.075 Score=49.64 Aligned_cols=66 Identities=15% Similarity=0.096 Sum_probs=44.7
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
.++|+|+| .|+||+.+++.+. .-++++. ++|+.....+... ..|+..+.++++++. .+|+|+...
T Consensus 191 gktvGIIG-lG~IG~~vA~~l~-a~G~~V~-~~d~~~~~~~~~~------~~G~~~~~~l~ell~------~aDvV~l~~ 255 (393)
T 2nac_A 191 AMHVGTVA-AGRIGLAVLRRLA-PFDVHLH-YTDRHRLPESVEK------ELNLTWHATREDMYP------VCDVVTLNC 255 (393)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHG-GGTCEEE-EECSSCCCHHHHH------HHTCEECSSHHHHGG------GCSEEEECS
T ss_pred CCEEEEEe-ECHHHHHHHHHHH-hCCCEEE-EEcCCccchhhHh------hcCceecCCHHHHHh------cCCEEEEec
Confidence 46899999 5999999999876 4578876 4664321111111 234555578999885 699988765
Q ss_pred C
Q 025154 115 D 115 (257)
Q Consensus 115 ~ 115 (257)
.
T Consensus 256 P 256 (393)
T 2nac_A 256 P 256 (393)
T ss_dssp C
T ss_pred C
Confidence 3
No 360
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=94.15 E-value=0.13 Score=46.22 Aligned_cols=60 Identities=20% Similarity=0.187 Sum_probs=42.0
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEc
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDF 113 (257)
..++|+|+| +|+||+.+++.+. .-++++. ++|+... .. +...+.++++++. .+|+|+-.
T Consensus 123 ~g~~vgIIG-~G~IG~~~A~~l~-~~G~~V~-~~dr~~~-~~-----------~~~~~~~l~ell~------~aDvV~l~ 181 (303)
T 1qp8_A 123 QGEKVAVLG-LGEIGTRVGKILA-ALGAQVR-GFSRTPK-EG-----------PWRFTNSLEEALR------EARAAVCA 181 (303)
T ss_dssp TTCEEEEES-CSTHHHHHHHHHH-HTTCEEE-EECSSCC-CS-----------SSCCBSCSHHHHT------TCSEEEEC
T ss_pred CCCEEEEEc-cCHHHHHHHHHHH-HCCCEEE-EECCCcc-cc-----------CcccCCCHHHHHh------hCCEEEEe
Confidence 346899999 5999999999876 4678876 4665321 10 1223467888885 79998866
Q ss_pred C
Q 025154 114 T 114 (257)
Q Consensus 114 T 114 (257)
.
T Consensus 182 ~ 182 (303)
T 1qp8_A 182 L 182 (303)
T ss_dssp C
T ss_pred C
Confidence 5
No 361
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=94.14 E-value=0.64 Score=40.17 Aligned_cols=107 Identities=16% Similarity=0.162 Sum_probs=53.8
Q ss_pred cccccccccCccccccCC---CCCCCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCee
Q 025154 13 HHISQNVKAKRFISCSTN---PPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIP 89 (257)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~---~~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~ 89 (257)
||.+.+.++.+..+...- ..-...++.|+|++|.+|+.+++.+.+ .+.+++....+.. ....++
T Consensus 6 ~~~~~~~~~~~~~~~~~mm~~~~l~gk~~lVTGas~GIG~aia~~la~-~G~~V~~~~~~~~--~~~~~~---------- 72 (271)
T 3v2g_A 6 HHSSGVDLGTENLYFQSMMTSISLAGKTAFVTGGSRGIGAAIAKRLAL-EGAAVALTYVNAA--ERAQAV---------- 72 (271)
T ss_dssp --------------CHHHHTTTCCTTCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEESSCH--HHHHHH----------
T ss_pred cccccccccccccchhhhccccCCCCCEEEEeCCCcHHHHHHHHHHHH-CCCEEEEEeCCCH--HHHHHH----------
Confidence 455555665555544321 111224699999999999999998875 5888765543320 111111
Q ss_pred eecCHHHHHhccccCCCcc-EEEEcCChHhHHHHHHHHHHc--CCCeEEeCCC
Q 025154 90 VMSDLTMVLGSISQSKARA-VVIDFTDASTVYDNVKQATAF--GMRSVVYVPH 139 (257)
Q Consensus 90 v~~dl~~~l~~~~~~~~~D-VvIDFT~p~~~~~~~~~a~~~--Gi~vViGTTG 139 (257)
.+.+... ...+. +..|.+.++...+.+..+.+. ++.+|+=..|
T Consensus 73 -----~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg 118 (271)
T 3v2g_A 73 -----VSEIEQA--GGRAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAG 118 (271)
T ss_dssp -----HHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred -----HHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcEEEECCC
Confidence 0111100 01111 446788888888877766654 7888886655
No 362
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=94.13 E-value=0.16 Score=43.79 Aligned_cols=74 Identities=22% Similarity=0.174 Sum_probs=48.0
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCcc-EEEEcC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VvIDFT 114 (257)
.+|.|+|++|.+|+.+++.+.+ .+.+++.. ++... ... .. .+. +..|.|
T Consensus 29 k~vlVTGas~gIG~aia~~l~~-~G~~V~~~-~r~~~--~~~-------~~-------------------~~~~~~~Dv~ 78 (260)
T 3un1_A 29 KVVVITGASQGIGAGLVRAYRD-RNYRVVAT-SRSIK--PSA-------DP-------------------DIHTVAGDIS 78 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHHH-TTCEEEEE-ESSCC--CCS-------ST-------------------TEEEEESCTT
T ss_pred CEEEEeCCCCHHHHHHHHHHHH-CCCEEEEE-eCChh--hcc-------cC-------------------ceEEEEccCC
Confidence 4689999999999999998875 57887754 33210 000 00 111 345678
Q ss_pred ChHhHHHHHHHHHHc--CCCeEEeCCC
Q 025154 115 DASTVYDNVKQATAF--GMRSVVYVPH 139 (257)
Q Consensus 115 ~p~~~~~~~~~a~~~--Gi~vViGTTG 139 (257)
.++...+.+..+.+. ++.+|+-..|
T Consensus 79 d~~~v~~~~~~~~~~~g~iD~lv~nAg 105 (260)
T 3un1_A 79 KPETADRIVREGIERFGRIDSLVNNAG 105 (260)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHCCCCCEEEECCC
Confidence 887777777666554 6788776654
No 363
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=94.13 E-value=0.16 Score=45.11 Aligned_cols=32 Identities=22% Similarity=0.281 Sum_probs=27.0
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (257)
|++|.|+|++|.+|+.+++.+.+ .+.++++..
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~ 32 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLE-KGYEVHGIK 32 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEC
T ss_pred CCEEEEECCCChHHHHHHHHHHH-CCCEEEEEE
Confidence 57899999999999999998875 478877653
No 364
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=94.11 E-value=0.079 Score=47.66 Aligned_cols=72 Identities=17% Similarity=0.099 Sum_probs=42.2
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeee---cCHHHHHhccccCCCccEEEE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVM---SDLTMVLGSISQSKARAVVID 112 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~---~dl~~~l~~~~~~~~~DVvID 112 (257)
|||+|+|++|.+|+.++..+....-..-+..+|....-..+.++.....+..+..+ +|+++++. ++|+||-
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~------~aDvVvi 74 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLK------GCDVVVI 74 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHT------TCSEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecCCCCHHHHhC------CCCEEEE
Confidence 69999998899999999887754322224467754210111122211111123332 57888774 7998885
Q ss_pred c
Q 025154 113 F 113 (257)
Q Consensus 113 F 113 (257)
.
T Consensus 75 ~ 75 (314)
T 1mld_A 75 P 75 (314)
T ss_dssp C
T ss_pred C
Confidence 4
No 365
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=94.10 E-value=0.47 Score=41.90 Aligned_cols=33 Identities=18% Similarity=0.147 Sum_probs=27.6
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEe
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (257)
+++|.|+|++|.+|+.+++.+.+ .+.++++...
T Consensus 9 ~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r 41 (357)
T 1rkx_A 9 GKRVFVTGHTGFKGGWLSLWLQT-MGATVKGYSL 41 (357)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEES
T ss_pred CCEEEEECCCchHHHHHHHHHHh-CCCeEEEEeC
Confidence 36899999999999999998875 4788877553
No 366
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=94.08 E-value=0.075 Score=47.99 Aligned_cols=65 Identities=15% Similarity=0.148 Sum_probs=44.5
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEec-CCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEc
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS-HSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~-~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDF 113 (257)
..+|+|+| .|+||+.+++.+. .-++++. ++|+ ... .. ... ..|+...+++++++. .+|+|+..
T Consensus 146 g~~vgIIG-~G~IG~~~A~~l~-~~G~~V~-~~d~~~~~-~~--~~~----~~g~~~~~~l~ell~------~aDvVil~ 209 (320)
T 1gdh_A 146 NKTLGIYG-FGSIGQALAKRAQ-GFDMDID-YFDTHRAS-SS--DEA----SYQATFHDSLDSLLS------VSQFFSLN 209 (320)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHH-TTTCEEE-EECSSCCC-HH--HHH----HHTCEECSSHHHHHH------HCSEEEEC
T ss_pred CCEEEEEC-cCHHHHHHHHHHH-HCCCEEE-EECCCCcC-hh--hhh----hcCcEEcCCHHHHHh------hCCEEEEe
Confidence 46899999 5999999999877 4578876 4665 421 11 111 234555558999885 69998876
Q ss_pred CC
Q 025154 114 TD 115 (257)
Q Consensus 114 T~ 115 (257)
..
T Consensus 210 ~p 211 (320)
T 1gdh_A 210 AP 211 (320)
T ss_dssp CC
T ss_pred cc
Confidence 53
No 367
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=93.97 E-value=0.25 Score=42.86 Aligned_cols=82 Identities=11% Similarity=0.108 Sum_probs=47.7
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCcc-EEEEcC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VvIDFT 114 (257)
.+|.|+|++|.+|+.+++.+.+ .+.+++. +++.. ....++. +.+.. ..++. +..|.+
T Consensus 30 k~vlVTGas~gIG~aia~~L~~-~G~~V~~-~~r~~--~~~~~~~---------------~~l~~---~~~~~~~~~Dv~ 87 (276)
T 2b4q_A 30 RIALVTGGSRGIGQMIAQGLLE-AGARVFI-CARDA--EACADTA---------------TRLSA---YGDCQAIPADLS 87 (276)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEE-ECSCH--HHHHHHH---------------HHHTT---SSCEEECCCCTT
T ss_pred CEEEEeCCCChHHHHHHHHHHH-CCCEEEE-EeCCH--HHHHHHH---------------HHHHh---cCceEEEEeeCC
Confidence 4799999999999999998875 5788664 44321 1111110 11110 00111 124677
Q ss_pred ChHhHHHHHHHHHHc--CCCeEEeCCC
Q 025154 115 DASTVYDNVKQATAF--GMRSVVYVPH 139 (257)
Q Consensus 115 ~p~~~~~~~~~a~~~--Gi~vViGTTG 139 (257)
.++...+.+..+.+. ++.+|+-..|
T Consensus 88 d~~~v~~~~~~~~~~~g~iD~lvnnAg 114 (276)
T 2b4q_A 88 SEAGARRLAQALGELSARLDILVNNAG 114 (276)
T ss_dssp SHHHHHHHHHHHHHHCSCCSEEEECCC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 777777766665543 5777776554
No 368
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=93.95 E-value=0.21 Score=43.32 Aligned_cols=30 Identities=33% Similarity=0.506 Sum_probs=25.8
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGA 66 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~ 66 (257)
|||.|+|++|.+|+.+++.+.+ .+.++++.
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~-~G~~V~~~ 30 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLA-RGLEVAVL 30 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHT-TTCEEEEE
T ss_pred CEEEEEeCCcHHHHHHHHHHHH-CCCEEEEE
Confidence 5899999999999999998875 57887764
No 369
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=93.93 E-value=0.19 Score=43.81 Aligned_cols=32 Identities=25% Similarity=0.306 Sum_probs=26.9
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (257)
.++|.|+|++|.+|+.+++.+.+ .+.++++..
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~-~G~~V~~~~ 34 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLE-KGYEVYGAD 34 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEC
T ss_pred CCEEEEECCCChHHHHHHHHHHH-CCCEEEEEE
Confidence 36899999999999999998875 478887654
No 370
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=93.83 E-value=0.32 Score=42.36 Aligned_cols=83 Identities=19% Similarity=0.239 Sum_probs=49.7
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCcc-EEEEcC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VvIDFT 114 (257)
..+.|+|++|.+|+.+++.+.+ .+..++. +++.. ....++. +.+.. ....+. +..|.+
T Consensus 29 k~~lVTGas~GIG~aia~~la~-~G~~V~~-~~r~~--~~~~~~~---------------~~l~~--~~~~~~~~~~Dv~ 87 (283)
T 3v8b_A 29 PVALITGAGSGIGRATALALAA-DGVTVGA-LGRTR--TEVEEVA---------------DEIVG--AGGQAIALEADVS 87 (283)
T ss_dssp CEEEEESCSSHHHHHHHHHHHH-TTCEEEE-EESSH--HHHHHHH---------------HHHTT--TTCCEEEEECCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHH-CCCEEEE-EeCCH--HHHHHHH---------------HHHHh--cCCcEEEEEccCC
Confidence 3689999999999999998875 5777765 34321 1111110 11110 001111 345788
Q ss_pred ChHhHHHHHHHHHHc--CCCeEEeCCC
Q 025154 115 DASTVYDNVKQATAF--GMRSVVYVPH 139 (257)
Q Consensus 115 ~p~~~~~~~~~a~~~--Gi~vViGTTG 139 (257)
.++...+.+..+.+. ++.+++=..|
T Consensus 88 d~~~v~~~~~~~~~~~g~iD~lVnnAg 114 (283)
T 3v8b_A 88 DELQMRNAVRDLVLKFGHLDIVVANAG 114 (283)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence 888887777766554 6888875544
No 371
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=93.78 E-value=0.09 Score=49.61 Aligned_cols=37 Identities=14% Similarity=0.140 Sum_probs=30.4
Q ss_pred CCCCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEec
Q 025154 32 PQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (257)
Q Consensus 32 ~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~ 69 (257)
...|++|.|+|++|.+|+.+++.+ ...+.++++....
T Consensus 147 ~~~~~~VLVTGatG~iG~~l~~~L-~~~g~~V~~l~R~ 183 (508)
T 4f6l_B 147 HRPLGNTLLTGATGFLGAYLIEAL-QGYSHRIYCFIRA 183 (508)
T ss_dssp BCCCEEEEESCTTSHHHHHHHHHT-BTTEEEEEEEEES
T ss_pred cCCCCeEEEECCccchHHHHHHHH-HhcCCEEEEEECC
Confidence 345789999999999999999988 4668888877543
No 372
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=93.76 E-value=0.075 Score=48.19 Aligned_cols=66 Identities=17% Similarity=0.127 Sum_probs=44.1
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEc
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDF 113 (257)
..++|+|+| +|+||+.+++.+.. -++++. ++|+... .+ ... ..|+. +.++++++. .+|+|+..
T Consensus 149 ~g~~vgIIG-~G~iG~~iA~~l~~-~G~~V~-~~d~~~~-~~--~~~----~~g~~-~~~l~~~l~------~aDvVil~ 211 (334)
T 2dbq_A 149 YGKTIGIIG-LGRIGQAIAKRAKG-FNMRIL-YYSRTRK-EE--VER----ELNAE-FKPLEDLLR------ESDFVVLA 211 (334)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHH-TTCEEE-EECSSCC-HH--HHH----HHCCE-ECCHHHHHH------HCSEEEEC
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHh-CCCEEE-EECCCcc-hh--hHh----hcCcc-cCCHHHHHh------hCCEEEEC
Confidence 346899999 59999999998874 578865 4665321 11 111 12343 358888885 69999877
Q ss_pred CCh
Q 025154 114 TDA 116 (257)
Q Consensus 114 T~p 116 (257)
..+
T Consensus 212 vp~ 214 (334)
T 2dbq_A 212 VPL 214 (334)
T ss_dssp CCC
T ss_pred CCC
Confidence 643
No 373
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=93.76 E-value=0.22 Score=45.68 Aligned_cols=36 Identities=14% Similarity=0.154 Sum_probs=29.6
Q ss_pred CCCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEec
Q 025154 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (257)
Q Consensus 33 ~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~ 69 (257)
..|++|.|+|++|.+|+.+++.+ ...+.++++...+
T Consensus 67 ~~~~~vlVTGatG~iG~~l~~~L-~~~g~~V~~~~R~ 102 (427)
T 4f6c_A 67 RPLGNTLLTGATGFLGAYLIEAL-QGYSHRIYCFIRA 102 (427)
T ss_dssp CCCEEEEEECTTSHHHHHHHHHH-TTTEEEEEEEEEC
T ss_pred CCCCEEEEecCCcHHHHHHHHHH-HcCCCEEEEEECC
Confidence 44679999999999999999988 4568888876643
No 374
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=93.74 E-value=0.15 Score=51.20 Aligned_cols=35 Identities=23% Similarity=0.245 Sum_probs=27.0
Q ss_pred CCCCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEec
Q 025154 32 PQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (257)
Q Consensus 32 ~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~ 69 (257)
+..+.||+|+|+ |.||..++..++ ..+++++ ++|.
T Consensus 309 ~~~~~kV~VIGa-G~MG~~iA~~la-~aG~~V~-l~D~ 343 (725)
T 2wtb_A 309 PRKIKKVAIIGG-GLMGSGIATALI-LSNYPVI-LKEV 343 (725)
T ss_dssp CCCCCCEEEECC-SHHHHHHHHHHH-TTTCCEE-EECS
T ss_pred cccCcEEEEEcC-CHhhHHHHHHHH-hCCCEEE-EEEC
Confidence 344679999995 999999999876 4578765 4564
No 375
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=93.74 E-value=0.043 Score=50.44 Aligned_cols=64 Identities=16% Similarity=0.030 Sum_probs=44.8
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
..+|+|+| +|+||+.+++.+. .-++++++ +|+.. ...... ..|+...+++++++. .+|+|+-..
T Consensus 160 g~tvGIIG-lG~IG~~vA~~l~-~~G~~V~~-~d~~~---~~~~~~----~~g~~~~~~l~ell~------~aDiV~l~~ 223 (352)
T 3gg9_A 160 GQTLGIFG-YGKIGQLVAGYGR-AFGMNVLV-WGREN---SKERAR----ADGFAVAESKDALFE------QSDVLSVHL 223 (352)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHH-HTTCEEEE-ECSHH---HHHHHH----HTTCEECSSHHHHHH------HCSEEEECC
T ss_pred CCEEEEEe-ECHHHHHHHHHHH-hCCCEEEE-ECCCC---CHHHHH----hcCceEeCCHHHHHh------hCCEEEEec
Confidence 46999999 6999999999876 45888775 56421 111111 245666679999996 689988654
No 376
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=93.74 E-value=0.43 Score=39.96 Aligned_cols=84 Identities=19% Similarity=0.258 Sum_probs=53.9
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecC---HHHHHhccccCCCcc-E
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSD---LTMVLGSISQSKARA-V 109 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~d---l~~~l~~~~~~~~~D-V 109 (257)
.|.|+.|+|| |..|+.+++.+.+ .++++++.+|..... .. -.|++++.. ++++.+ ...| +
T Consensus 11 ~~k~v~IiGA-Gg~g~~v~~~l~~-~~~~~vgfiDd~~~~---~~------~~g~~Vlg~~~~~~~~~~-----~~~~~v 74 (220)
T 4ea9_A 11 AIGGVVIIGG-GGHAKVVIESLRA-CGETVAAIVDADPTR---RA------VLGVPVVGDDLALPMLRE-----QGLSRL 74 (220)
T ss_dssp CSSCEEEECC-SHHHHHHHHHHHH-TTCCEEEEECSCC------C------BTTBCEEESGGGHHHHHH-----TTCCEE
T ss_pred CCCCEEEEcC-CHHHHHHHHHHHh-CCCEEEEEEeCCccc---Cc------CCCeeEECCHHHHHHhhc-----ccccEE
Confidence 3558999997 9999999998875 789999999954211 11 236677543 444443 2344 4
Q ss_pred EEEcCChHhHHHHHHHHHHcCCCe
Q 025154 110 VIDFTDASTVYDNVKQATAFGMRS 133 (257)
Q Consensus 110 vIDFT~p~~~~~~~~~a~~~Gi~v 133 (257)
+|=...+..-.+..+.+.+.|..+
T Consensus 75 ~iAIg~~~~R~~i~~~l~~~g~~~ 98 (220)
T 4ea9_A 75 FVAIGDNRLRQKLGRKARDHGFSL 98 (220)
T ss_dssp EECCCCHHHHHHHHHHHHHTTCEE
T ss_pred EEecCCHHHHHHHHHHHHhcCCCc
Confidence 442234555667777777777543
No 377
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=93.73 E-value=0.81 Score=39.47 Aligned_cols=83 Identities=14% Similarity=0.120 Sum_probs=49.6
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCcc-EEEEcC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VvIDFT 114 (257)
.+|.|+|++|.+|+.+++.+.+ .+.+++. +++.. ....++. +.+.. ...++. +..|++
T Consensus 45 k~vlITGasggIG~~la~~L~~-~G~~V~~-~~r~~--~~~~~~~---------------~~l~~--~~~~~~~~~~Dl~ 103 (285)
T 2c07_A 45 KVALVTGAGRGIGREIAKMLAK-SVSHVIC-ISRTQ--KSCDSVV---------------DEIKS--FGYESSGYAGDVS 103 (285)
T ss_dssp CEEEEESTTSHHHHHHHHHHTT-TSSEEEE-EESSH--HHHHHHH---------------HHHHT--TTCCEEEEECCTT
T ss_pred CEEEEECCCcHHHHHHHHHHHH-cCCEEEE-EcCCH--HHHHHHH---------------HHHHh--cCCceeEEECCCC
Confidence 4799999999999999998874 5788876 55321 1111110 11110 001122 345788
Q ss_pred ChHhHHHHHHHHHHc--CCCeEEeCCC
Q 025154 115 DASTVYDNVKQATAF--GMRSVVYVPH 139 (257)
Q Consensus 115 ~p~~~~~~~~~a~~~--Gi~vViGTTG 139 (257)
.++...+.+..+.+. ++.+|+-..|
T Consensus 104 d~~~v~~~~~~~~~~~~~id~li~~Ag 130 (285)
T 2c07_A 104 KKEEISEVINKILTEHKNVDILVNNAG 130 (285)
T ss_dssp CHHHHHHHHHHHHHHCSCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 888777776655442 5788776654
No 378
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=93.67 E-value=0.056 Score=48.85 Aligned_cols=97 Identities=12% Similarity=0.101 Sum_probs=56.6
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCc------EEEEEEecC----C---CCcchhhhhcC--CCCCCeeeecCHHHHH
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGM------EVAGAIDSH----S---VGEDIGMVCDM--EQPLEIPVMSDLTMVL 98 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~------eLvg~vd~~----~---~g~d~g~~~g~--~~~~gv~v~~dl~~~l 98 (257)
.+|||+|+||+|.+|+.++..+....-+ +|+. +|.. . .| .+.++... ....++..++++.+.+
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l-~Di~~~~~~~~~~g-~~~dl~~~~~~~~~~i~~~~~~~~al 81 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQL-LEIPNEKAQKALQG-VMMEIDDCAFPLLAGMTAHADPMTAF 81 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEE-ECCSCHHHHHHHHH-HHHHHHTTTCTTEEEEEEESSHHHHT
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEE-EcCCCccccccchh-hHHHHhhhcccccCcEEEecCcHHHh
Confidence 3589999998899999999888764322 6665 7753 1 01 01112110 0012345567888888
Q ss_pred hccccCCCccEEEEcCC----h------------HhHHHHHHHHHHcC-CC-eEEeCC
Q 025154 99 GSISQSKARAVVIDFTD----A------------STVYDNVKQATAFG-MR-SVVYVP 138 (257)
Q Consensus 99 ~~~~~~~~~DVvIDFT~----p------------~~~~~~~~~a~~~G-i~-vViGTT 138 (257)
. ++|+||-... | ....+.++.+.+++ .. .|+=.|
T Consensus 82 ~------~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~S 133 (329)
T 1b8p_A 82 K------DADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVG 133 (329)
T ss_dssp T------TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred C------CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcc
Confidence 4 7998885431 1 12345666777774 44 444444
No 379
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=93.64 E-value=0.079 Score=48.04 Aligned_cols=39 Identities=21% Similarity=0.244 Sum_probs=27.3
Q ss_pred CCCCCCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEec
Q 025154 30 NPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (257)
Q Consensus 30 ~~~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~ 69 (257)
.+...++||+|+|+ |.+|..++-.+...+-+.=+..+|.
T Consensus 4 ~~~~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di 42 (326)
T 2zqz_A 4 ITDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDI 42 (326)
T ss_dssp --CCCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred cccCCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeC
Confidence 34555689999997 9999999988776553333445674
No 380
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=93.64 E-value=0.093 Score=47.10 Aligned_cols=64 Identities=22% Similarity=0.170 Sum_probs=43.4
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
..+|+|+| .|+||+.+++.+. .-++++. ++|+... . .... ..|+.. .++++++. .+|+|+...
T Consensus 142 g~~vgIiG-~G~IG~~~A~~l~-~~G~~V~-~~d~~~~-~--~~~~----~~g~~~-~~l~ell~------~aDvV~l~~ 204 (307)
T 1wwk_A 142 GKTIGIIG-FGRIGYQVAKIAN-ALGMNIL-LYDPYPN-E--ERAK----EVNGKF-VDLETLLK------ESDVVTIHV 204 (307)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHH-HTTCEEE-EECSSCC-H--HHHH----HTTCEE-CCHHHHHH------HCSEEEECC
T ss_pred CceEEEEc-cCHHHHHHHHHHH-HCCCEEE-EECCCCC-h--hhHh----hcCccc-cCHHHHHh------hCCEEEEec
Confidence 46899999 5999999999876 4578876 4665321 1 1111 234443 47888885 699988765
Q ss_pred C
Q 025154 115 D 115 (257)
Q Consensus 115 ~ 115 (257)
.
T Consensus 205 p 205 (307)
T 1wwk_A 205 P 205 (307)
T ss_dssp C
T ss_pred C
Confidence 3
No 381
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=93.56 E-value=0.35 Score=47.98 Aligned_cols=95 Identities=13% Similarity=0.136 Sum_probs=59.6
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCC------------CCcchh---------hhhcCCCCCCeee--e-
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS------------VGEDIG---------MVCDMEQPLEIPV--M- 91 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~------------~g~d~g---------~~~g~~~~~gv~v--~- 91 (257)
.||+|+|+ |..|..+++.++. .|+.=+.++|... ...|+| .+..+ ..++.+ +
T Consensus 18 s~VlVVGa-GGLGsevak~La~-aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~i--NP~v~V~a~~ 93 (640)
T 1y8q_B 18 GRVLVVGA-GGIGCELLKNLVL-TGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQF--YPKANIVAYH 93 (640)
T ss_dssp CEEEEECC-SHHHHHHHHHHHH-HTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTT--CTTCEEEEEE
T ss_pred CeEEEECc-CHHHHHHHHHHHH-cCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHH--CCCCeEEEEe
Confidence 58999996 9999999999874 4666666777321 011211 01111 122322 1
Q ss_pred cCH------HHHHhccccCCCccEEEEcC-ChHhHHHHHHHHHHcCCCeEEe-CCCC
Q 025154 92 SDL------TMVLGSISQSKARAVVIDFT-DASTVYDNVKQATAFGMRSVVY-VPHI 140 (257)
Q Consensus 92 ~dl------~~~l~~~~~~~~~DVvIDFT-~p~~~~~~~~~a~~~Gi~vViG-TTG~ 140 (257)
..+ ++.+. .+|+|||.+ .+++-...-..|.++++|+|.+ +.|+
T Consensus 94 ~~i~~~~~~~~~~~------~~DlVvda~Dn~~aR~~ln~~c~~~~iPlI~~g~~G~ 144 (640)
T 1y8q_B 94 DSIMNPDYNVEFFR------QFILVMNALDNRAARNHVNRMCLAADVPLIESGTAGY 144 (640)
T ss_dssp SCTTSTTSCHHHHT------TCSEEEECCSCHHHHHHHHHHHHHHTCCEEEEEEETT
T ss_pred cccchhhhhHhhhc------CCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEEEecc
Confidence 122 34553 799999997 4566666778899999999954 4454
No 382
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=93.53 E-value=0.12 Score=42.15 Aligned_cols=30 Identities=27% Similarity=0.324 Sum_probs=24.2
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGA 66 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~ 66 (257)
-+|.|+|++|.+|+.+++.+.. .+.++++.
T Consensus 40 ~~vlV~Ga~ggiG~~~~~~~~~-~G~~V~~~ 69 (198)
T 1pqw_A 40 ERVLIHSATGGVGMAAVSIAKM-IGARIYTT 69 (198)
T ss_dssp CEEEETTTTSHHHHHHHHHHHH-HTCEEEEE
T ss_pred CEEEEeeCCChHHHHHHHHHHH-cCCEEEEE
Confidence 4799999999999999987764 46776653
No 383
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=93.52 E-value=0.78 Score=40.51 Aligned_cols=114 Identities=20% Similarity=0.169 Sum_probs=52.1
Q ss_pred cccccccccCccccccCCCCCC--CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeee
Q 025154 13 HHISQNVKAKRFISCSTNPPQS--NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV 90 (257)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~--~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v 90 (257)
||+.-..+-+++..+...++.. ...+.|+|++|.+|+.+++.+++ .+.+++.. ++.. +.+... ..-
T Consensus 3 ~~~~~~~~~~~~~~~~p~~m~~l~gk~vlVTGas~GIG~aia~~la~-~G~~Vv~~-~r~~-~~~~~~---------~~~ 70 (322)
T 3qlj_A 3 HHHHHHMGTLEAQTQGPGSMGVVDGRVVIVTGAGGGIGRAHALAFAA-EGARVVVN-DIGV-GLDGSP---------ASG 70 (322)
T ss_dssp -------------------CCTTTTCEEEETTTTSHHHHHHHHHHHH-TTCEEEEE-CCCB-CTTSSB---------TCT
T ss_pred cccccccceeeeeccCCchhcccCCCEEEEECCCcHHHHHHHHHHHH-CCCEEEEE-eCcc-cccccc---------ccc
Confidence 4444444445555555333321 23688999999999999998875 57877643 3210 000000 000
Q ss_pred ecCHHHHHhccccCCCccE---EEEcCChHhHHHHHHHHHHc--CCCeEEeCCC
Q 025154 91 MSDLTMVLGSISQSKARAV---VIDFTDASTVYDNVKQATAF--GMRSVVYVPH 139 (257)
Q Consensus 91 ~~dl~~~l~~~~~~~~~DV---vIDFT~p~~~~~~~~~a~~~--Gi~vViGTTG 139 (257)
.+.++++.+++. ....++ ..|.+.++...+.+..+.+. ++.+|+=..|
T Consensus 71 ~~~~~~~~~~~~-~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg 123 (322)
T 3qlj_A 71 GSAAQSVVDEIT-AAGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAG 123 (322)
T ss_dssp TSHHHHHHHHHH-HTTCEEEEECCCTTSHHHHHHHHHHHHHHHSCCCEEECCCC
T ss_pred HHHHHHHHHHHH-hcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 001111111100 012232 34778888888877777665 7888886655
No 384
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=93.52 E-value=0.098 Score=46.81 Aligned_cols=60 Identities=18% Similarity=0.076 Sum_probs=42.3
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
..+|+|+| .|+||+.+++.+.. -++++.+ +|+.. ... ..+...+++++++. .+|+|+-..
T Consensus 122 g~tvGIIG-lG~IG~~vA~~l~~-~G~~V~~-~dr~~--~~~---------~~~~~~~~l~ell~------~aDiV~l~~ 181 (290)
T 3gvx_A 122 GKALGILG-YGGIGRRVAHLAKA-FGMRVIA-YTRSS--VDQ---------NVDVISESPADLFR------QSDFVLIAI 181 (290)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHH-HTCEEEE-ECSSC--CCT---------TCSEECSSHHHHHH------HCSEEEECC
T ss_pred cchheeec-cCchhHHHHHHHHh-hCcEEEE-Eeccc--ccc---------ccccccCChHHHhh------ccCeEEEEe
Confidence 46999999 59999999998874 5888775 56431 110 11334568999986 689888654
No 385
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=93.47 E-value=0.069 Score=48.33 Aligned_cols=33 Identities=21% Similarity=0.294 Sum_probs=24.8
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEec
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~ 69 (257)
|||+|+|+ |.||..++..+...+-..=+..+|.
T Consensus 1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~ 33 (314)
T 3nep_X 1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDI 33 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECS
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 69999996 9999999988876543323345774
No 386
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=93.42 E-value=0.32 Score=42.62 Aligned_cols=30 Identities=20% Similarity=0.419 Sum_probs=25.9
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGA 66 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~ 66 (257)
|||.|+|++|.+|+.+++.+.+ .+.++++.
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~-~G~~V~~~ 30 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQ-NGHDVIIL 30 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHH-CCCEEEEE
Confidence 5899999999999999998875 57888764
No 387
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=93.41 E-value=0.14 Score=46.11 Aligned_cols=90 Identities=12% Similarity=0.013 Sum_probs=56.1
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchh-hhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIG-MVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g-~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
.+|+|+| +|.||+.+++.+......+-+.++++. ..+... ++... ....+.+. |+++++. ++|+||-.|
T Consensus 122 ~~v~iIG-aG~~a~~~~~al~~~~~~~~V~v~~r~-~a~~la~~l~~~-~g~~~~~~-~~~eav~------~aDIVi~aT 191 (313)
T 3hdj_A 122 SVLGLFG-AGTQGAEHAAQLSARFALEAILVHDPY-ASPEILERIGRR-CGVPARMA-APADIAA------QADIVVTAT 191 (313)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHSCCCEEEEECTT-CCHHHHHHHHHH-HTSCEEEC-CHHHHHH------HCSEEEECC
T ss_pred cEEEEEC-ccHHHHHHHHHHHHhCCCcEEEEECCc-HHHHHHHHHHHh-cCCeEEEe-CHHHHHh------hCCEEEEcc
Confidence 5899999 599999999998875557777788875 222221 11100 01123445 9999986 699999777
Q ss_pred ChHhHHHHH-HHHHHcCCCeE-EeC
Q 025154 115 DASTVYDNV-KQATAFGMRSV-VYV 137 (257)
Q Consensus 115 ~p~~~~~~~-~~a~~~Gi~vV-iGT 137 (257)
.... ..+ ...++.|.+++ +|+
T Consensus 192 ~s~~--pvl~~~~l~~G~~V~~vGs 214 (313)
T 3hdj_A 192 RSTT--PLFAGQALRAGAFVGAIGS 214 (313)
T ss_dssp CCSS--CSSCGGGCCTTCEEEECCC
T ss_pred CCCC--cccCHHHcCCCcEEEECCC
Confidence 4321 111 22356777776 454
No 388
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=93.39 E-value=0.26 Score=46.90 Aligned_cols=125 Identities=13% Similarity=0.194 Sum_probs=75.2
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecC-----CCCc----chhhhhcCCCC-----------CCeeeecCH
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH-----SVGE----DIGMVCDMEQP-----------LEIPVMSDL 94 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~-----~~g~----d~g~~~g~~~~-----------~gv~v~~dl 94 (257)
..+|+|.| .|.||+..++.+.+ .+.+||++.|+. ..|- |+..+...... ++....+ .
T Consensus 230 g~~v~VqG-~GnVG~~~a~~L~~-~GakvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~~y~~~~~a~~i~-~ 306 (449)
T 1bgv_A 230 GKTVALAG-FGNVAWGAAKKLAE-LGAKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDYADKFGVQFFP-G 306 (449)
T ss_dssp TCEEEECC-SSHHHHHHHHHHHH-HTCEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTHHHHHHHTCEEEE-T
T ss_pred CCEEEEEC-CCHHHHHHHHHHHH-CCCEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChhhcccccCCEEeC-c
Confidence 36899999 59999999987764 589999999942 2243 22222211000 0112111 2
Q ss_pred HHHHhccccCCCccEEEEcCChHhH-HHHHHHHHHcCCCeEEeCC--CCCHHHHHHHHHHhhhcCceEE--EccCchHHH
Q 025154 95 TMVLGSISQSKARAVVIDFTDASTV-YDNVKQATAFGMRSVVYVP--HIQLETVSALSAFCDKASMGCL--IAPTLSIGS 169 (257)
Q Consensus 95 ~~~l~~~~~~~~~DVvIDFT~p~~~-~~~~~~a~~~Gi~vViGTT--G~s~e~~~~L~~~a~~~gipvl--~spNfSlGv 169 (257)
++++. .++||++-+..+... .+++.....+|+.+|++-- .++++.. +.+.++.|+-++ +..|=. ||
T Consensus 307 ~e~~~-----~~~Dil~P~A~~~~I~~~na~~l~a~g~kiV~EgAN~p~T~eA~---~~l~~~~Gi~~~PD~~aNaG-GV 377 (449)
T 1bgv_A 307 EKPWG-----QKVDIIMPCATQNDVDLEQAKKIVANNVKYYIEVANMPTTNEAL---RFLMQQPNMVVAPSKAVNAG-GV 377 (449)
T ss_dssp CCGGG-----SCCSEEECCSCTTCBCHHHHHHHHHTTCCEEECCSSSCBCHHHH---HHHHHCTTCEEECHHHHTTH-HH
T ss_pred hhhhc-----CCcceeeccccccccchhhHHHHHhcCCeEEEeCCCCcCCHHHH---HHHHHcCCEEEEChHHhcCC-Cc
Confidence 34554 489999987765444 6788888889999999865 4566543 333333254444 334433 66
Q ss_pred HH
Q 025154 170 IL 171 (257)
Q Consensus 170 nl 171 (257)
..
T Consensus 378 ~~ 379 (449)
T 1bgv_A 378 LV 379 (449)
T ss_dssp HH
T ss_pred ee
Confidence 54
No 389
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=93.37 E-value=0.39 Score=42.78 Aligned_cols=71 Identities=15% Similarity=0.096 Sum_probs=42.7
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCc-EEEEEEecCCCCcch--hhhhc----CCCCCCeeeecCHHHHHhccccCCC
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDSHSVGEDI--GMVCD----MEQPLEIPVMSDLTMVLGSISQSKA 106 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~-eLvg~vd~~~~g~d~--g~~~g----~~~~~gv~v~~dl~~~l~~~~~~~~ 106 (257)
.++||+|+|+ |.||..++..+... ++ + +..+|....-.+. -++.. ......+..++|+ +.+. +
T Consensus 3 ~~~kI~VIGa-G~~G~~ia~~la~~-g~~~-V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~------~ 72 (317)
T 2ewd_A 3 ERRKIAVIGS-GQIGGNIAYIVGKD-NLAD-VVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADIS------G 72 (317)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHH-TCCE-EEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGT------T
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhC-CCce-EEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhC------C
Confidence 3579999997 99999999988754 55 7 5667753210000 00000 0002245556787 5553 7
Q ss_pred ccEEEEcC
Q 025154 107 RAVVIDFT 114 (257)
Q Consensus 107 ~DVvIDFT 114 (257)
+|+||...
T Consensus 73 aDiVi~av 80 (317)
T 2ewd_A 73 SDVVIITA 80 (317)
T ss_dssp CSEEEECC
T ss_pred CCEEEEeC
Confidence 99988765
No 390
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=93.36 E-value=0.37 Score=42.20 Aligned_cols=33 Identities=27% Similarity=0.380 Sum_probs=27.5
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEe
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (257)
+.+|.|+|++|.+|+.+++.+.+ .+.++++...
T Consensus 5 ~~~vlVTGatGfIG~~l~~~L~~-~G~~V~~~~r 37 (337)
T 2c29_D 5 SETVCVTGASGFIGSWLVMRLLE-RGYTVRATVR 37 (337)
T ss_dssp -CEEEETTTTSHHHHHHHHHHHH-TTCEEEEEES
T ss_pred CCEEEEECCchHHHHHHHHHHHH-CCCEEEEEEC
Confidence 46899999999999999998875 5788887654
No 391
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=93.33 E-value=0.13 Score=51.44 Aligned_cols=35 Identities=14% Similarity=0.202 Sum_probs=27.0
Q ss_pred CCCCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEec
Q 025154 32 PQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (257)
Q Consensus 32 ~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~ 69 (257)
+...+||+|+|+ |.||..++..++. .+++++ ++|.
T Consensus 311 ~~~i~kV~VIGa-G~MG~~iA~~la~-aG~~V~-l~D~ 345 (715)
T 1wdk_A 311 AKDVKQAAVLGA-GIMGGGIAYQSAS-KGTPIL-MKDI 345 (715)
T ss_dssp CCCCSSEEEECC-HHHHHHHHHHHHH-TTCCEE-EECS
T ss_pred cccCCEEEEECC-ChhhHHHHHHHHh-CCCEEE-EEEC
Confidence 344678999995 9999999998774 578766 4664
No 392
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=93.33 E-value=0.82 Score=39.08 Aligned_cols=83 Identities=14% Similarity=0.184 Sum_probs=51.8
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCcc---EEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA---VVI 111 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D---VvI 111 (257)
+.+|.|+|++|.+|+.+++.+.+ .+.+++...++.. .....+ .+.+.+ ...+ +..
T Consensus 26 ~k~vlITGas~gIG~a~a~~l~~-~G~~V~~~~~~~~--~~~~~~---------------~~~~~~----~~~~~~~~~~ 83 (272)
T 4e3z_A 26 TPVVLVTGGSRGIGAAVCRLAAR-QGWRVGVNYAANR--EAADAV---------------VAAITE----SGGEAVAIPG 83 (272)
T ss_dssp SCEEEETTTTSHHHHHHHHHHHH-TTCEEEEEESSCH--HHHHHH---------------HHHHHH----TTCEEEEEEC
T ss_pred CCEEEEECCCchHHHHHHHHHHH-CCCEEEEEcCCCh--hHHHHH---------------HHHHHh----cCCcEEEEEc
Confidence 34689999999999999998875 5788765544321 111111 111111 1222 345
Q ss_pred EcCChHhHHHHHHHHHHc--CCCeEEeCCC
Q 025154 112 DFTDASTVYDNVKQATAF--GMRSVVYVPH 139 (257)
Q Consensus 112 DFT~p~~~~~~~~~a~~~--Gi~vViGTTG 139 (257)
|.+.++.....+..+.+. ++.+|+=..|
T Consensus 84 Dl~~~~~v~~~~~~~~~~~g~id~li~nAg 113 (272)
T 4e3z_A 84 DVGNAADIAAMFSAVDRQFGRLDGLVNNAG 113 (272)
T ss_dssp CTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CCCCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence 788888888777776654 7888876655
No 393
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=93.30 E-value=0.13 Score=47.10 Aligned_cols=70 Identities=21% Similarity=0.249 Sum_probs=43.2
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCC-cEEEEEEecCC---CC--cchhhhhcCCCCCCeeeecCHHHHHhccccCCCcc
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARG-MEVAGAIDSHS---VG--EDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA 108 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~-~eLvg~vd~~~---~g--~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D 108 (257)
++||+|+|++|.+|+.++..+....- -+| ..+|... .| .|+.... . ....+.+++|+.+.+. ++|
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~ev-vLiDi~~~k~~g~a~DL~~~~-~-~~~~i~~t~d~~~al~------dAD 78 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNL-CLYDPFAVGLEGVAEEIRHCG-F-EGLNLTFTSDIKEALT------DAK 78 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCE-EEECSCHHHHHHHHHHHHHHC-C-TTCCCEEESCHHHHHT------TEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEE-EEEeCCchhHHHHHHhhhhCc-C-CCCceEEcCCHHHHhC------CCC
Confidence 57999999779999999977665432 244 3567431 11 1121111 1 1234556788888774 799
Q ss_pred EEEEc
Q 025154 109 VVIDF 113 (257)
Q Consensus 109 VvIDF 113 (257)
+||-.
T Consensus 79 vVvit 83 (343)
T 3fi9_A 79 YIVSS 83 (343)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 88854
No 394
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=93.29 E-value=0.37 Score=43.81 Aligned_cols=74 Identities=16% Similarity=0.145 Sum_probs=41.6
Q ss_pred CCCCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCC---CC--cchhhhhcCCCCCCeeeecCHHHHHhccccCCC
Q 025154 32 PQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS---VG--EDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKA 106 (257)
Q Consensus 32 ~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~---~g--~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~ 106 (257)
...++||+|+|+ |.||..++..+....-..=+..+|... .| .|............+...+|+++ + .+
T Consensus 16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~~-~------~~ 87 (331)
T 4aj2_A 16 QVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYSV-T------AN 87 (331)
T ss_dssp -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGGG-G------TT
T ss_pred cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHHH-h------CC
Confidence 455789999997 999999998877554322234577431 11 11221111101122334567775 4 37
Q ss_pred ccEEEEc
Q 025154 107 RAVVIDF 113 (257)
Q Consensus 107 ~DVvIDF 113 (257)
+|+||-.
T Consensus 88 aDiVvi~ 94 (331)
T 4aj2_A 88 SKLVIIT 94 (331)
T ss_dssp EEEEEEC
T ss_pred CCEEEEc
Confidence 9988754
No 395
>2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens}
Probab=93.29 E-value=0.34 Score=45.00 Aligned_cols=116 Identities=14% Similarity=0.139 Sum_probs=59.8
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCC-Ceee-ecCHHHHHhccccCCCccEEEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPL-EIPV-MSDLTMVLGSISQSKARAVVID 112 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~-gv~v-~~dl~~~l~~~~~~~~~DVvID 112 (257)
++||+|+|+ |.-...+++.+.+..+++.+.+.... .+. ..+. .. -+.+ +.|.+++++ +++..++|+|+-
T Consensus 24 ~~~IlIlG~-g~r~~al~~~~a~~~g~~~v~~~~~~-~~~--~~~~----~~~~~~~~~~d~~~l~~-~~~~~~~d~V~~ 94 (452)
T 2qk4_A 24 AARVLIIGS-GGREHTLAWKLAQSHHVKQVLVAPGN-AGT--ACSE----KISNTAISISDHTALAQ-FCKEKKIEFVVV 94 (452)
T ss_dssp SEEEEEEEC-SHHHHHHHHHHTTCTTEEEEEEEECC-GGG--SBSS----SEEECCCCSSCHHHHHH-HHHHHTCCEEEE
T ss_pred CcEEEEECC-CHHHHHHHHHHHhcCCCCEEEEECCC-hhh--hhhc----cccccccCCCCHHHHHH-HHHHcCCCEEEE
Confidence 479999996 63223455556667788765544321 111 1111 10 1111 456666553 223347898774
Q ss_pred cCChHhHHHHHHHHHHcCCCeEEeCC--CCCH-HHHHHHHHHhhhcCceEE
Q 025154 113 FTDASTVYDNVKQATAFGMRSVVYVP--HIQL-ETVSALSAFCDKASMGCL 160 (257)
Q Consensus 113 FT~p~~~~~~~~~a~~~Gi~vViGTT--G~s~-e~~~~L~~~a~~~gipvl 160 (257)
.+-.......+..+.+.|++++ |.+ .... .+....++++++.|+|+.
T Consensus 95 ~~E~~~~~~~~~~l~~~gi~~~-g~~~~~~~~~~dK~~~k~~l~~~gip~p 144 (452)
T 2qk4_A 95 GPEAPLAAGIVGNLRSAGVQCF-GPTAEAAQLESSKRFAKEFMDRHGIPTA 144 (452)
T ss_dssp CSSHHHHTTHHHHHHHTTCCEE-SCCTTTTHHHHBHHHHHHHHHHTTCCBC
T ss_pred CCcHHHHHHHHHHHHhcCCcEe-CcCHHHHHHhcCHHHHHHHHHHCCCCCC
Confidence 3321112245556667899976 443 2211 223346677788887753
No 396
>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A
Probab=93.27 E-value=0.35 Score=45.14 Aligned_cols=93 Identities=15% Similarity=0.165 Sum_probs=58.5
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCC-cEEEEEEe-cCCCCcchhhhhcCC---CCC-------------Ceeee---cC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARG-MEVAGAID-SHSVGEDIGMVCDME---QPL-------------EIPVM---SD 93 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~-~eLvg~vd-~~~~g~d~g~~~g~~---~~~-------------gv~v~---~d 93 (257)
|.||.|.|+||-+|+.....+.+.|+ +++++... ... +..+.... .+. ++.++ +.
T Consensus 21 mk~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aLaa~g~n----v~~L~~q~~~f~p~~v~v~d~~~~~~~~~~v~~G~~~ 96 (398)
T 2y1e_A 21 RLRVVVLGSTGSIGTQALQVIADNPDRFEVVGLAAGGAH----LDTLLRQRAQTGVTNIAVADEHAAQRVGDIPYHGSDA 96 (398)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTTEEEEEEEECSSC----HHHHHHHHHHHCCCCEEESCHHHHHHHCCCSEESTTH
T ss_pred ceEEEEEccCcHHHHHHHHHHHhCCCceEEEEEEecCCC----HHHHHHHHHHcCCCEEEEcCHHHhhhcCCEEEecHHH
Confidence 67899999999999999999998876 99999887 321 11111000 010 11111 11
Q ss_pred HHHHHhccccCCCccEEEEcCChHhHHHHHHHHHHcCCCeEE
Q 025154 94 LTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVV 135 (257)
Q Consensus 94 l~~~l~~~~~~~~~DVvIDFT~p~~~~~~~~~a~~~Gi~vVi 135 (257)
+.++.. ..++|+|+-.-.-.+-+.-...|++.|+.+-.
T Consensus 97 l~~~a~----~~~~D~Vv~AIvG~aGL~PTlaAi~aGK~iaL 134 (398)
T 2y1e_A 97 ATRLVE----QTEADVVLNALVGALGLRPTLAALKTGARLAL 134 (398)
T ss_dssp HHHHHH----HSCCSEEEECCCSGGGHHHHHHHHHHTCEEEE
T ss_pred HHHHhc----CCCCCEEEEeCcCHHHHHHHHHHHHCCCceEE
Confidence 223332 24689888766655556666677888888766
No 397
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=93.15 E-value=0.24 Score=44.82 Aligned_cols=94 Identities=15% Similarity=0.145 Sum_probs=52.8
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCee--e--ecCHHHHHhccccCCCccEEE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIP--V--MSDLTMVLGSISQSKARAVVI 111 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~--v--~~dl~~~l~~~~~~~~~DVvI 111 (257)
-+|.|+|++|.+|...++++....+.++++...+. ... +++ .++|.. + .+++.+.+.++ ....+|++|
T Consensus 173 ~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~---~~~-~~~---~~lGad~vi~~~~~~~~~v~~~-~~~g~Dvvi 244 (363)
T 4dvj_A 173 PAILIVGGAGGVGSIAVQIARQRTDLTVIATASRP---ETQ-EWV---KSLGAHHVIDHSKPLAAEVAAL-GLGAPAFVF 244 (363)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSH---HHH-HHH---HHTTCSEEECTTSCHHHHHHTT-CSCCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCH---HHH-HHH---HHcCCCEEEeCCCCHHHHHHHh-cCCCceEEE
Confidence 47999998899999999877654678877654321 011 111 012221 1 12344433322 223699999
Q ss_pred EcCChHhHHHHHHHHH-HcCCCeEEeC
Q 025154 112 DFTDASTVYDNVKQAT-AFGMRSVVYV 137 (257)
Q Consensus 112 DFT~p~~~~~~~~~a~-~~Gi~vViGT 137 (257)
|++-.....+.+..++ ..|.=+++|.
T Consensus 245 d~~g~~~~~~~~~~~l~~~G~iv~~g~ 271 (363)
T 4dvj_A 245 STTHTDKHAAEIADLIAPQGRFCLIDD 271 (363)
T ss_dssp ECSCHHHHHHHHHHHSCTTCEEEECSC
T ss_pred ECCCchhhHHHHHHHhcCCCEEEEECC
Confidence 9987554544444444 4454444544
No 398
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=93.04 E-value=0.51 Score=43.01 Aligned_cols=72 Identities=18% Similarity=0.163 Sum_probs=41.5
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCC---CC--cchhhhhcCCCCCCeeeecCHHHHHhccccCCCcc
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS---VG--EDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA 108 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~---~g--~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D 108 (257)
.++||+|+|+ |.||..++..++...-+.=+..+|... .| .|+...........+..++|+++ + .++|
T Consensus 20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~------~daD 91 (330)
T 3ldh_A 20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-S------AGSK 91 (330)
T ss_dssp CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-C------SSCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-h------CCCC
Confidence 4689999997 999999998887654332234567421 11 11111111101123444667776 5 3799
Q ss_pred EEEEc
Q 025154 109 VVIDF 113 (257)
Q Consensus 109 VvIDF 113 (257)
+||-.
T Consensus 92 iVIit 96 (330)
T 3ldh_A 92 LVVIT 96 (330)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 98854
No 399
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=93.03 E-value=1.2 Score=38.63 Aligned_cols=85 Identities=20% Similarity=0.203 Sum_probs=51.0
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCcc-EEEEcC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VvIDFT 114 (257)
..+.|.|++|.+|+.+++.+++ .+.+++....+.. ....++. +++-.. ...+. +..|.+
T Consensus 30 k~~lVTGas~GIG~aia~~la~-~G~~V~~~~~~~~--~~~~~~~--------------~~~~~~---~~~~~~~~~Dv~ 89 (280)
T 4da9_A 30 PVAIVTGGRRGIGLGIARALAA-SGFDIAITGIGDA--EGVAPVI--------------AELSGL---GARVIFLRADLA 89 (280)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEEEESCCH--HHHHHHH--------------HHHHHT---TCCEEEEECCTT
T ss_pred CEEEEecCCCHHHHHHHHHHHH-CCCeEEEEeCCCH--HHHHHHH--------------HHHHhc---CCcEEEEEecCC
Confidence 3589999999999999998875 5788765432210 1111110 111110 01222 345788
Q ss_pred ChHhHHHHHHHHHHc--CCCeEEeCCCC
Q 025154 115 DASTVYDNVKQATAF--GMRSVVYVPHI 140 (257)
Q Consensus 115 ~p~~~~~~~~~a~~~--Gi~vViGTTG~ 140 (257)
.++...+.+..+.+. ++.+|+=..|.
T Consensus 90 d~~~v~~~~~~~~~~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 90 DLSSHQATVDAVVAEFGRIDCLVNNAGI 117 (280)
T ss_dssp SGGGHHHHHHHHHHHHSCCCEEEEECC-
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 888888877777665 78888766654
No 400
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=92.98 E-value=0.17 Score=47.11 Aligned_cols=115 Identities=13% Similarity=0.098 Sum_probs=59.2
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeee-ecCHHHHHhccccCCCccEEEE
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-MSDLTMVLGSISQSKARAVVID 112 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v-~~dl~~~l~~~~~~~~~DVvID 112 (257)
+||||.|+|. |.=-.+++..+.+++++.-+.+... ..|. ..+.. ...+.+ +.|++.+++ +++..++|++|-
T Consensus 2 ~~mkvlviG~-ggre~ala~~l~~s~~v~~v~~~pg-n~g~--~~~~~---~~~~~~~~~d~~~l~~-~a~~~~id~vv~ 73 (431)
T 3mjf_A 2 NAMNILIIGN-GGREHALGWKAAQSPLADKIYVAPG-NAGT--ALEPT---LENVDIAATDIAGLLA-FAQSHDIGLTIV 73 (431)
T ss_dssp -CEEEEEEEC-SHHHHHHHHHHTTCTTEEEEEEEEC-CHHH--HHCTT---CEECCCCTTCHHHHHH-HHHHTTEEEEEE
T ss_pred CCcEEEEECC-CHHHHHHHHHHHhCCCCCEEEEECC-CHHH--hhhcc---cceecCCcCCHHHHHH-HHHHhCcCEEEE
Confidence 4799999994 7444467777777877654433331 1111 11110 001222 346666543 233357887764
Q ss_pred cCChHh--HHHHHHHHHHcCCCeEEeCCC--CC-HHHHHHHHHHhhhcCceE
Q 025154 113 FTDAST--VYDNVKQATAFGMRSVVYVPH--IQ-LETVSALSAFCDKASMGC 159 (257)
Q Consensus 113 FT~p~~--~~~~~~~a~~~Gi~vViGTTG--~s-~e~~~~L~~~a~~~gipv 159 (257)
. |+. ....+..+.+.|+|++ |.+- .. .......++++++.|+|+
T Consensus 74 g--~e~~l~~~~~~~l~~~Gi~~~-Gp~~~a~~~~~dK~~~k~~l~~~GIpt 122 (431)
T 3mjf_A 74 G--PEAPLVIGVVDAFRAAGLAIF-GPTQAAAQLEGSKAFTKDFLARHNIPS 122 (431)
T ss_dssp C--SHHHHHTTHHHHHHHTTCCEE-SCCHHHHHHHHCHHHHHHHHHHTTCSB
T ss_pred C--CchHHHHHHHHHHHhcCCCee-CCCHHHHHHhhCHHHHHHHHHHcCCCC
Confidence 3 333 2356666778899976 4431 00 011223455666666664
No 401
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=92.97 E-value=0.84 Score=40.05 Aligned_cols=84 Identities=23% Similarity=0.338 Sum_probs=50.6
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCcc-EEEEcC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VvIDFT 114 (257)
.+|.|+|++|.+|+.+++.+++ .+.+++.. ++.. ....++ .+.+.+.. ...+. +..|.+
T Consensus 42 k~vlVTGas~GIG~aia~~la~-~G~~V~~~-~r~~--~~~~~~---------------~~~l~~~~-~~~~~~~~~Dv~ 101 (293)
T 3rih_A 42 RSVLVTGGTKGIGRGIATVFAR-AGANVAVA-ARSP--RELSSV---------------TAELGELG-AGNVIGVRLDVS 101 (293)
T ss_dssp CEEEETTTTSHHHHHHHHHHHH-TTCEEEEE-ESSG--GGGHHH---------------HHHHTTSS-SSCEEEEECCTT
T ss_pred CEEEEeCCCcHHHHHHHHHHHH-CCCEEEEE-ECCH--HHHHHH---------------HHHHHhhC-CCcEEEEEEeCC
Confidence 3689999999999999998875 57777653 4321 111111 11111000 00122 346888
Q ss_pred ChHhHHHHHHHHHHc--CCCeEEeCCC
Q 025154 115 DASTVYDNVKQATAF--GMRSVVYVPH 139 (257)
Q Consensus 115 ~p~~~~~~~~~a~~~--Gi~vViGTTG 139 (257)
.++...+.+..+.+. ++.+|+=..|
T Consensus 102 d~~~v~~~~~~~~~~~g~iD~lvnnAg 128 (293)
T 3rih_A 102 DPGSCADAARTVVDAFGALDVVCANAG 128 (293)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 888888777766554 6788876654
No 402
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=92.95 E-value=0.62 Score=44.03 Aligned_cols=164 Identities=13% Similarity=0.176 Sum_probs=85.4
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeee-e---cCHHHHHhccccCCCccEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-M---SDLTMVLGSISQSKARAVV 110 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v-~---~dl~~~l~~~~~~~~~DVv 110 (257)
.|||.|+|+ |++|+.+++.+. ..+.+++ ++|... ..+..+. +.+++.+ + .+++-+.+. .-.++|++
T Consensus 3 ~M~iiI~G~-G~vG~~la~~L~-~~~~~v~-vId~d~--~~~~~~~---~~~~~~~i~Gd~~~~~~L~~A--gi~~ad~~ 72 (461)
T 4g65_A 3 AMKIIILGA-GQVGGTLAENLV-GENNDIT-IVDKDG--DRLRELQ---DKYDLRVVNGHASHPDVLHEA--GAQDADML 72 (461)
T ss_dssp CEEEEEECC-SHHHHHHHHHTC-STTEEEE-EEESCH--HHHHHHH---HHSSCEEEESCTTCHHHHHHH--TTTTCSEE
T ss_pred cCEEEEECC-CHHHHHHHHHHH-HCCCCEE-EEECCH--HHHHHHH---HhcCcEEEEEcCCCHHHHHhc--CCCcCCEE
Confidence 589999996 999999999875 5677776 677531 1111221 1234433 2 233322211 01478998
Q ss_pred EEcCChHhHH-HHHHHHHH-cCCCeEEeCCCCCHHHHHHHHHHhh--hcCceEEEccCchHHHHHHHHHHHH----hcC-
Q 025154 111 IDFTDASTVY-DNVKQATA-FGMRSVVYVPHIQLETVSALSAFCD--KASMGCLIAPTLSIGSILLQQAAIS----ASF- 181 (257)
Q Consensus 111 IDFT~p~~~~-~~~~~a~~-~Gi~vViGTTG~s~e~~~~L~~~a~--~~gipvl~spNfSlGvnll~~~a~~----l~~- 181 (257)
|=.|.-+... -....|.+ ++.+-++.-. .+++..+..+.+-. .-|+-.+++|-..+.-.+.+.+... ...
T Consensus 73 ia~t~~De~Nl~~~~~Ak~~~~~~~~iar~-~~~~~~~~~~~l~~~~~~giD~iIsPe~~~a~~I~~~i~~p~~~~~~~f 151 (461)
T 4g65_A 73 VAVTNTDETNMAACQVAFTLFNTPNRIARI-RSPQYLAQKEALFKSGAIPVDHLIAPEELVTSYIERLIQYPGALQVVSF 151 (461)
T ss_dssp EECCSCHHHHHHHHHHHHHHHCCSSEEEEC-CCHHHHTTHHHHTTTSSSCCSEEECHHHHHHHHHHHHHTSTTCSEEEEE
T ss_pred EEEcCChHHHHHHHHHHHHhcCCccceeEe-ccchhhhhhhhhhhcccCCcceeecHHHHHHHHHHHhccCCCeEEEEEe
Confidence 8777544432 22233333 3666565443 23433333333332 3467779988877766554433110 000
Q ss_pred CCCCeEEEeccCCCCCCCCCccHHHHHH
Q 025154 182 HYKNVEIVESRPNARVRYMTRTLISMQV 209 (257)
Q Consensus 182 ~~~DiEIiE~HH~~K~DapSGTa~~l~~ 209 (257)
.+..++++|..=...----+-+..++..
T Consensus 152 ~~g~~~l~e~~v~~~s~l~g~~l~~l~~ 179 (461)
T 4g65_A 152 AEEKVSLVAVKAYYGGPLVGNALSALRE 179 (461)
T ss_dssp TTTTEEEEEEECCTTSSSTTCBHHHHHH
T ss_pred ccceEEEEEEEecCCCeecCCcHHHHHh
Confidence 1346788877433322223556666653
No 403
>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*
Probab=92.94 E-value=1 Score=43.02 Aligned_cols=122 Identities=14% Similarity=0.085 Sum_probs=67.9
Q ss_pred CCceEEEEcCCChHHHHHHHHHHh---cC-CcEEEEEEecCCCC---cc----------------hhhhhcC-C--CCCC
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTK---AR-GMEVAGAIDSHSVG---ED----------------IGMVCDM-E--QPLE 87 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~---~~-~~eLvg~vd~~~~g---~d----------------~g~~~g~-~--~~~g 87 (257)
.|.||.|.|+||-+|+.....+.+ .| .+++++........ +. +.++-.. . ...+
T Consensus 76 ~mk~I~ILGSTGSIGtqTLdVi~~~p~~pd~f~V~aLaAg~Nv~lL~eQ~~ef~P~~v~v~d~~~~~~L~~~l~~~~~~~ 155 (488)
T 3au8_A 76 KPINVAIFGSTGSIGTNALNIIRECNKIENVFNVKALYVNKSVNELYEQAREFLPEYLCIHDKSVYEELKELVKNIKDYK 155 (488)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHHHHSCCEEEEEEEESSCHHHHHHHHHHHCCSEEEESCGGGTHHHHTGGGGSTTCC
T ss_pred cceEEEEEccCcHHHHHHHHHHHcccCCCCeEEEEEEEcCCCHHHHHHHHHHcCCCEEEEcCHHHHHHHHHHhhhhcCCC
Confidence 466899999999999999998887 44 59999987622100 00 0000000 0 0012
Q ss_pred eeeecCHHHHHhccccCCCccEEEEcCChHhHHHHHHHHHHcCCCeEEeCCCCCHHHH----HHHHHHhhhc-CceEE
Q 025154 88 IPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETV----SALSAFCDKA-SMGCL 160 (257)
Q Consensus 88 v~v~~dl~~~l~~~~~~~~~DVvIDFT~p~~~~~~~~~a~~~Gi~vViGTTG~s~e~~----~~L~~~a~~~-gipvl 160 (257)
+.+..-.+.+. ++++..++|+|+-.-.-.+-+.-...|++.|+.+-.. +.|-+ +.+.++++++ |..++
T Consensus 156 ~~v~~G~egl~-e~a~~~~~D~Vv~AIvG~aGL~PTlaAi~aGK~IALA----NKESLV~aG~Lv~~~a~~~~g~~Il 228 (488)
T 3au8_A 156 PIILCGDEGMK-EICSSNSIDKIVIGIDSFQGLYSTMYAIMNNKIVALA----NKESIVSAGFFLKKLLNIHKNAKII 228 (488)
T ss_dssp CEEEEHHHHHH-HHHHCTTCCEEEECCCHHHHHHHHHHHHHTTCEEEEC----CSHHHHHHHHHHHHHHHHSTTCEEE
T ss_pred ceEEeCHHHHH-HHhcCCCCCEEEEccccHhHHHHHHHHHHCCCcEEEe----cchhhhhchHHHHHHHHhcCCCeEE
Confidence 22322111111 1122245888887666666667777788888888773 33322 2355566665 55554
No 404
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=92.94 E-value=0.18 Score=45.50 Aligned_cols=63 Identities=17% Similarity=0.163 Sum_probs=40.9
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
-++|+|+| +|+||+.+++.+. .-++++.+ +|+.. .....+. ......++++++. .+|+|+-..
T Consensus 139 g~tvGIiG-~G~IG~~vA~~l~-~~G~~V~~-~dr~~--~~~~~~~------~~~~~~~l~ell~------~aDiV~l~~ 201 (315)
T 3pp8_A 139 EFSVGIMG-AGVLGAKVAESLQ-AWGFPLRC-WSRSR--KSWPGVE------SYVGREELRAFLN------QTRVLINLL 201 (315)
T ss_dssp TCCEEEEC-CSHHHHHHHHHHH-TTTCCEEE-EESSC--CCCTTCE------EEESHHHHHHHHH------TCSEEEECC
T ss_pred CCEEEEEe-eCHHHHHHHHHHH-HCCCEEEE-EcCCc--hhhhhhh------hhcccCCHHHHHh------hCCEEEEec
Confidence 46899999 5999999999876 45888875 55431 1111000 0011257888886 799988554
No 405
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=92.94 E-value=0.18 Score=45.82 Aligned_cols=63 Identities=17% Similarity=0.264 Sum_probs=42.0
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
-.+|+|+| +|+||+.+++.+. .-++++.+ +|+.. .....+ .+...+.++++++. .+|+|+-..
T Consensus 140 g~tvGIIG-lG~IG~~vA~~l~-~~G~~V~~-~dr~~--~~~~~~------~~~~~~~~l~ell~------~aDvV~l~l 202 (324)
T 3hg7_A 140 GRTLLILG-TGSIGQHIAHTGK-HFGMKVLG-VSRSG--RERAGF------DQVYQLPALNKMLA------QADVIVSVL 202 (324)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHH-HTTCEEEE-ECSSC--CCCTTC------SEEECGGGHHHHHH------TCSEEEECC
T ss_pred cceEEEEE-ECHHHHHHHHHHH-hCCCEEEE-EcCCh--HHhhhh------hcccccCCHHHHHh------hCCEEEEeC
Confidence 46899999 6999999999886 45888775 56431 111110 11223568899886 799888554
No 406
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=92.93 E-value=0.69 Score=41.13 Aligned_cols=70 Identities=13% Similarity=0.127 Sum_probs=41.9
Q ss_pred ceEEEEcCCChHHHHHHHHHHhc-CCcEEEEEEecCCCCcc-hh-hhhcC----CCCCCeeeecCHHHHHhccccCCCcc
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKA-RGMEVAGAIDSHSVGED-IG-MVCDM----EQPLEIPVMSDLTMVLGSISQSKARA 108 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~-~~~eLvg~vd~~~~g~d-~g-~~~g~----~~~~gv~v~~dl~~~l~~~~~~~~~D 108 (257)
|||+|+|+ |.||..++..+... .+.+++ .+|....-.+ .. ++... .....+..++|+++ +. ++|
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~-l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~------~aD 71 (310)
T 1guz_A 1 MKITVIGA-GNVGATTAFRLAEKQLARELV-LLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TA------NSD 71 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEE-EECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GT------TCS
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEE-EEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HC------CCC
Confidence 59999997 99999999988764 256655 4664311000 00 11100 01223455678876 53 799
Q ss_pred EEEEcC
Q 025154 109 VVIDFT 114 (257)
Q Consensus 109 VvIDFT 114 (257)
+||...
T Consensus 72 vViiav 77 (310)
T 1guz_A 72 IVIITA 77 (310)
T ss_dssp EEEECC
T ss_pred EEEEeC
Confidence 988765
No 407
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=92.92 E-value=0.36 Score=43.15 Aligned_cols=31 Identities=35% Similarity=0.331 Sum_probs=25.0
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (257)
-+|.|+|++|.+|+.+++.+. ..+.++++..
T Consensus 171 ~~vlV~Ga~ggiG~~~~~~a~-~~Ga~V~~~~ 201 (347)
T 2hcy_A 171 HWVAISGAAGGLGSLAVQYAK-AMGYRVLGID 201 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEE
T ss_pred CEEEEECCCchHHHHHHHHHH-HCCCcEEEEc
Confidence 479999999999999998776 4577877643
No 408
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=92.91 E-value=0.18 Score=45.74 Aligned_cols=69 Identities=19% Similarity=0.138 Sum_probs=40.3
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCc-EEEEEEecCCC---C--cchhhhhc-CCCCCCeeeecCHHHHHhccccCCCc
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDSHSV---G--EDIGMVCD-MEQPLEIPVMSDLTMVLGSISQSKAR 107 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~-eLvg~vd~~~~---g--~d~g~~~g-~~~~~gv~v~~dl~~~l~~~~~~~~~ 107 (257)
++||+|+|+ |.||..++..+.. .++ +| ..+|.... | .|...... ...+..+..++|+ +.+. ++
T Consensus 7 ~~kI~viGa-G~vG~~~a~~l~~-~~~~~v-~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~------~a 76 (324)
T 3gvi_A 7 RNKIALIGS-GMIGGTLAHLAGL-KELGDV-VLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIE------GA 76 (324)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHH-TTCCEE-EEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGT------TC
T ss_pred CCEEEEECC-CHHHHHHHHHHHh-CCCCeE-EEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHC------CC
Confidence 479999997 9999999987764 455 64 45674320 1 11111100 0012334446777 4553 79
Q ss_pred cEEEEc
Q 025154 108 AVVIDF 113 (257)
Q Consensus 108 DVvIDF 113 (257)
|+||-.
T Consensus 77 DiVIia 82 (324)
T 3gvi_A 77 DVVIVT 82 (324)
T ss_dssp SEEEEC
T ss_pred CEEEEc
Confidence 988865
No 409
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=92.87 E-value=0.28 Score=44.04 Aligned_cols=60 Identities=22% Similarity=0.188 Sum_probs=41.9
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEc
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDF 113 (257)
...+|+|+| +|+||+.+++.+.. -++++. ++|+..... . + .+.++++++. .+|+|+-.
T Consensus 143 ~g~~vgIIG-~G~IG~~~A~~l~~-~G~~V~-~~d~~~~~~----------~--~-~~~~l~ell~------~aDvV~l~ 200 (311)
T 2cuk_A 143 QGLTLGLVG-MGRIGQAVAKRALA-FGMRVV-YHARTPKPL----------P--Y-PFLSLEELLK------EADVVSLH 200 (311)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHH-TTCEEE-EECSSCCSS----------S--S-CBCCHHHHHH------HCSEEEEC
T ss_pred CCCEEEEEE-ECHHHHHHHHHHHH-CCCEEE-EECCCCccc----------c--c-ccCCHHHHHh------hCCEEEEe
Confidence 346899999 59999999998874 578875 466532100 1 1 2568888885 68998876
Q ss_pred CC
Q 025154 114 TD 115 (257)
Q Consensus 114 T~ 115 (257)
..
T Consensus 201 ~p 202 (311)
T 2cuk_A 201 TP 202 (311)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 410
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=92.85 E-value=0.23 Score=46.37 Aligned_cols=61 Identities=23% Similarity=0.113 Sum_probs=43.0
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
-.+|||+| +|+||+.+++.+. .-++++. ++|+... .. ..++....++++++. .+|+|+-..
T Consensus 145 gktlGiIG-lG~IG~~vA~~l~-~~G~~V~-~~d~~~~-~~---------~~~~~~~~~l~ell~------~aDvV~l~~ 205 (404)
T 1sc6_A 145 GKKLGIIG-YGHIGTQLGILAE-SLGMYVY-FYDIENK-LP---------LGNATQVQHLSDLLN------MSDVVSLHV 205 (404)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHH-HTTCEEE-EECSSCC-CC---------CTTCEECSCHHHHHH------HCSEEEECC
T ss_pred CCEEEEEe-ECHHHHHHHHHHH-HCCCEEE-EEcCCch-hc---------cCCceecCCHHHHHh------cCCEEEEcc
Confidence 35899999 6999999999876 4689876 4675311 00 112444568999986 689988654
No 411
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=92.84 E-value=0.092 Score=49.58 Aligned_cols=120 Identities=13% Similarity=0.186 Sum_probs=62.7
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecC----------CCCcchhhhhcCCCCCC-------eeeecCHHHH
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH----------SVGEDIGMVCDMEQPLE-------IPVMSDLTMV 97 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~----------~~g~d~g~~~g~~~~~g-------v~v~~dl~~~ 97 (257)
..||+|.| .|.+|+..++.+. +.+.++|++.|+. ..|-|..++.......+ .... +.+++
T Consensus 212 g~~vaVqG-~GnVG~~~a~~L~-~~GakvVavsD~~~~~~~G~i~d~~Gld~~~l~~~~~~~g~i~~~~~a~~i-~~~~~ 288 (421)
T 2yfq_A 212 DAKIAVQG-FGNVGTFTVKNIE-RQGGKVCAIAEWDRNEGNYALYNENGIDFKELLAYKEANKTLIGFPGAERI-TDEEF 288 (421)
T ss_dssp GSCEEEEC-CSHHHHHHHHHHH-HTTCCEEECCBCCSSSCSBCCBCSSCCCHHHHHHHHHHHCC----------------
T ss_pred CCEEEEEC-cCHHHHHHHHHHH-HCCCEEEEEEecCCCccceEEECCCCCCHHHHHHHHHhcCCcccCCCceEe-Cccch
Confidence 36899999 5999999999876 4689999999865 12334333221100000 1111 22455
Q ss_pred HhccccCCCccEEEEcCChHhH-HHHHHHHHHcCCCeEEeCC--CCCHHHHHHHHHHhhhcCceEEEccCch---HHHHH
Q 025154 98 LGSISQSKARAVVIDFTDASTV-YDNVKQATAFGMRSVVYVP--HIQLETVSALSAFCDKASMGCLIAPTLS---IGSIL 171 (257)
Q Consensus 98 l~~~~~~~~~DVvIDFT~p~~~-~~~~~~a~~~Gi~vViGTT--G~s~e~~~~L~~~a~~~gipvl~spNfS---lGvnl 171 (257)
+. .++||+|-++.+... .+++. +.+..+|++.- .++++-.+.|+ ++|+ ++.|-+. =||.+
T Consensus 289 ~~-----~~~DIliP~A~~n~i~~~~A~---~l~ak~VvEgAN~P~t~ea~~il~----~~GI--~~~Pd~~aNaGGV~v 354 (421)
T 2yfq_A 289 WT-----KEYDIIVPAALENVITGERAK---TINAKLVCEAANGPTTPEGDKVLT----ERGI--NLTPDILTNSGGVLV 354 (421)
T ss_dssp -----------CEEECSCSSCSCHHHHT---TCCCSEEECCSSSCSCHHHHHHHH----HHTC--EEECHHHHTTHHHHH
T ss_pred hc-----CCccEEEEcCCcCcCCcccHH---HcCCeEEEeCCccccCHHHHHHHH----HCCC--EEEChHHHhCCCeEE
Confidence 54 479999998865443 33333 44888888764 34554433343 4444 4545333 26654
No 412
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=92.76 E-value=0.12 Score=42.08 Aligned_cols=32 Identities=25% Similarity=0.328 Sum_probs=27.0
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEE
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (257)
+||||.|+|++|.+|+.+++.+. .+.+++...
T Consensus 2 ~kM~vlVtGasg~iG~~~~~~l~--~g~~V~~~~ 33 (202)
T 3d7l_A 2 NAMKILLIGASGTLGSAVKERLE--KKAEVITAG 33 (202)
T ss_dssp CSCEEEEETTTSHHHHHHHHHHT--TTSEEEEEE
T ss_pred CCcEEEEEcCCcHHHHHHHHHHH--CCCeEEEEe
Confidence 45799999999999999999887 588877543
No 413
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=92.74 E-value=0.074 Score=48.37 Aligned_cols=34 Identities=26% Similarity=0.252 Sum_probs=25.8
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCc-EEEEEEec
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDS 69 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~-eLvg~vd~ 69 (257)
.++||+|+|+ |.||..++..+....-. +|+ .+|.
T Consensus 4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~-l~D~ 38 (326)
T 3pqe_A 4 HVNKVALIGA-GFVGSSYAFALINQGITDELV-VIDV 38 (326)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEE-EECS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCceEE-EEec
Confidence 3679999996 99999999988765433 444 5664
No 414
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=92.66 E-value=0.081 Score=47.43 Aligned_cols=34 Identities=29% Similarity=0.310 Sum_probs=25.5
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEec
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~ 69 (257)
|||+|+||+|.+|+.++..+....-..-+..+|.
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di 34 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGR 34 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEEC
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcC
Confidence 5999999999999999988876543232445664
No 415
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=92.65 E-value=0.55 Score=39.01 Aligned_cols=82 Identities=22% Similarity=0.295 Sum_probs=50.1
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCcc----EEE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA----VVI 111 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D----VvI 111 (257)
.+|.|+|++|.+|+.+++.+.+ .+.+++...++.. ....++ .+.+.. ...+ +..
T Consensus 2 k~vlITGasggiG~~~a~~l~~-~G~~v~~~~~r~~--~~~~~~---------------~~~~~~----~~~~~~~~~~~ 59 (245)
T 2ph3_A 2 RKALITGASRGIGRAIALRLAE-DGFALAIHYGQNR--EKAEEV---------------AEEARR----RGSPLVAVLGA 59 (245)
T ss_dssp CEEEETTTTSHHHHHHHHHHHT-TTCEEEEEESSCH--HHHHHH---------------HHHHHH----TTCSCEEEEEC
T ss_pred CEEEEeCCCchHHHHHHHHHHH-CCCEEEEEcCCCH--HHHHHH---------------HHHHHh----cCCceEEEEec
Confidence 4799999999999999998875 5788877655421 111111 011110 1112 334
Q ss_pred EcCChHhHHHHHHHHHHc--CCCeEEeCCC
Q 025154 112 DFTDASTVYDNVKQATAF--GMRSVVYVPH 139 (257)
Q Consensus 112 DFT~p~~~~~~~~~a~~~--Gi~vViGTTG 139 (257)
|.+.++...+.+..+.+. ++.+|+=..|
T Consensus 60 D~~~~~~~~~~~~~~~~~~~~~d~li~~Ag 89 (245)
T 2ph3_A 60 NLLEAEAATALVHQAAEVLGGLDTLVNNAG 89 (245)
T ss_dssp CTTSHHHHHHHHHHHHHHHTCCCEEEECCC
T ss_pred cCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 778887777666655443 6788876655
No 416
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=92.54 E-value=0.29 Score=44.36 Aligned_cols=103 Identities=15% Similarity=0.094 Sum_probs=58.6
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
..+|+|+| +|+||+.+++.+. .-++++. ++|+... .... .. + .+.++++++. .+|+|+...
T Consensus 145 g~~vgIiG-~G~IG~~~A~~l~-~~G~~V~-~~d~~~~-~~~~-------~~-~-~~~~l~ell~------~aDvV~~~~ 205 (333)
T 1dxy_A 145 QQTVGVMG-TGHIGQVAIKLFK-GFGAKVI-AYDPYPM-KGDH-------PD-F-DYVSLEDLFK------QSDVIDLHV 205 (333)
T ss_dssp GSEEEEEC-CSHHHHHHHHHHH-HTTCEEE-EECSSCC-SSCC-------TT-C-EECCHHHHHH------HCSEEEECC
T ss_pred CCEEEEEC-cCHHHHHHHHHHH-HCCCEEE-EECCCcc-hhhH-------hc-c-ccCCHHHHHh------cCCEEEEcC
Confidence 36899999 5999999999876 4688876 5665321 1110 11 2 2458999886 699988765
Q ss_pred Ch-HhHH----HHHHHHHHcCCCeEEeCCCCCHHHHHHHHHHhhhcCc
Q 025154 115 DA-STVY----DNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASM 157 (257)
Q Consensus 115 ~p-~~~~----~~~~~a~~~Gi~vViGTTG~s~e~~~~L~~~a~~~gi 157 (257)
.. +.+. +.....++.|.-+|--.+|--.++ +.|.++.+++++
T Consensus 206 P~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~-~aL~~aL~~g~i 252 (333)
T 1dxy_A 206 PGIEQNTHIINEAAFNLMKPGAIVINTARPNLIDT-QAMLSNLKSGKL 252 (333)
T ss_dssp CCCGGGTTSBCHHHHHHSCTTEEEEECSCTTSBCH-HHHHHHHHTTSE
T ss_pred CCchhHHHHhCHHHHhhCCCCcEEEECCCCcccCH-HHHHHHHHhCCc
Confidence 32 1111 222333455554444344422222 345555555444
No 417
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=92.49 E-value=0.16 Score=47.00 Aligned_cols=63 Identities=14% Similarity=0.138 Sum_probs=43.2
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
-.+|+|+| +|+||+.+++.+. .-++++.+ +|+.. . ..... ..|+. +.++++++. .+|+|+-..
T Consensus 176 gktvGIIG-lG~IG~~vA~~l~-~fG~~V~~-~d~~~--~-~~~~~----~~g~~-~~~l~ell~------~aDvV~l~~ 238 (365)
T 4hy3_A 176 GSEIGIVG-FGDLGKALRRVLS-GFRARIRV-FDPWL--P-RSMLE----ENGVE-PASLEDVLT------KSDFIFVVA 238 (365)
T ss_dssp SSEEEEEC-CSHHHHHHHHHHT-TSCCEEEE-ECSSS--C-HHHHH----HTTCE-ECCHHHHHH------SCSEEEECS
T ss_pred CCEEEEec-CCcccHHHHHhhh-hCCCEEEE-ECCCC--C-HHHHh----hcCee-eCCHHHHHh------cCCEEEEcC
Confidence 35899999 6999999999765 56888764 66532 1 11111 23443 468999996 799988654
No 418
>3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis}
Probab=92.45 E-value=0.19 Score=47.04 Aligned_cols=112 Identities=10% Similarity=0.083 Sum_probs=60.2
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeee-ecCHHHHHhccccCCCccEEEEc
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-MSDLTMVLGSISQSKARAVVIDF 113 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v-~~dl~~~l~~~~~~~~~DVvIDF 113 (257)
+|||.|+|. |.-..+++..+.+++++.-+.+.. ...|... .. . .+.+ +.|++.+++ +++..++|++|-
T Consensus 21 ~m~ilvlG~-ggre~ala~~l~~s~~v~~v~~~p-gn~g~~~--~~----~-~~~i~~~d~~~l~~-~a~~~~id~vv~- 89 (442)
T 3lp8_A 21 SMNVLVIGS-GGREHSMLHHIRKSTLLNKLFIAP-GREGMSG--LA----D-IIDIDINSTIEVIQ-VCKKEKIELVVI- 89 (442)
T ss_dssp CEEEEEEEC-SHHHHHHHHHHTTCTTEEEEEEEE-CCGGGTT--TS----E-ECCCCTTCHHHHHH-HHHHTTCCEEEE-
T ss_pred CCEEEEECC-ChHHHHHHHHHHhCCCCCEEEEEC-CChHHhh--cc----c-eeecCcCCHHHHHH-HHHHhCCCEEEE-
Confidence 489999994 755566777777788766544443 1112110 00 0 0111 346666543 233357897774
Q ss_pred CChHhHH--HHHHHHHHcCCCeEEeCCC--CC-HHHHHHHHHHhhhcCceE
Q 025154 114 TDASTVY--DNVKQATAFGMRSVVYVPH--IQ-LETVSALSAFCDKASMGC 159 (257)
Q Consensus 114 T~p~~~~--~~~~~a~~~Gi~vViGTTG--~s-~e~~~~L~~~a~~~gipv 159 (257)
.|+... ..+..+.+.|+|++ |.+- .. .......++++++.|+|+
T Consensus 90 -g~E~~l~~~~~~~l~~~Gi~~~-Gp~~~a~~~~~dK~~~k~~l~~~GIp~ 138 (442)
T 3lp8_A 90 -GPETPLMNGLSDALTEEGILVF-GPSKAAARLESSKGFTKELCMRYGIPT 138 (442)
T ss_dssp -CSHHHHHTTHHHHHHHTTCEEE-SCCHHHHHHHHCHHHHHHHHHHHTCCB
T ss_pred -CCcHHHHHHHHHHHHhcCCcEe-cCCHHHHHHhhCHHHHHHHHHHCCCCC
Confidence 244433 45566678898876 4431 00 111223556667777764
No 419
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=92.44 E-value=0.14 Score=46.56 Aligned_cols=64 Identities=14% Similarity=0.110 Sum_probs=42.7
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
..+|+|+| +|+||+.+++.+. .-++++. ++|+.. ....... ..|+. +.++++++. .+|+|+-..
T Consensus 145 g~tvGIIG-~G~IG~~vA~~l~-~~G~~V~-~~d~~~--~~~~~~~----~~g~~-~~~l~ell~------~aDvV~l~~ 208 (330)
T 4e5n_A 145 NATVGFLG-MGAIGLAMADRLQ-GWGATLQ-YHEAKA--LDTQTEQ----RLGLR-QVACSELFA------SSDFILLAL 208 (330)
T ss_dssp TCEEEEEC-CSHHHHHHHHHTT-TSCCEEE-EECSSC--CCHHHHH----HHTEE-ECCHHHHHH------HCSEEEECC
T ss_pred CCEEEEEe-eCHHHHHHHHHHH-HCCCEEE-EECCCC--CcHhHHH----hcCce-eCCHHHHHh------hCCEEEEcC
Confidence 46999999 6999999999765 5688866 466532 1111111 22443 348999986 689988654
No 420
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=92.43 E-value=0.12 Score=46.40 Aligned_cols=98 Identities=15% Similarity=0.091 Sum_probs=53.9
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcCC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT~ 115 (257)
-+|.|+|++|.+|...++++. ..+.++++. .+.. ..+...-+|. .. +.-..++.+.+.+...+..+|++||++-
T Consensus 152 ~~VlV~Ga~g~iG~~~~q~a~-~~Ga~Vi~~-~~~~-~~~~~~~lGa--~~-i~~~~~~~~~~~~~~~~~g~D~vid~~g 225 (343)
T 3gaz_A 152 QTVLIQGGGGGVGHVAIQIAL-ARGARVFAT-ARGS-DLEYVRDLGA--TP-IDASREPEDYAAEHTAGQGFDLVYDTLG 225 (343)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEE-ECHH-HHHHHHHHTS--EE-EETTSCHHHHHHHHHTTSCEEEEEESSC
T ss_pred CEEEEecCCCHHHHHHHHHHH-HCCCEEEEE-eCHH-HHHHHHHcCC--CE-eccCCCHHHHHHHHhcCCCceEEEECCC
Confidence 379999988999999998765 568898887 4321 0111111111 11 1111233333321111236899999987
Q ss_pred hHhHHHHHHHHHHcCCCeEEeCCC
Q 025154 116 ASTVYDNVKQATAFGMRSVVYVPH 139 (257)
Q Consensus 116 p~~~~~~~~~a~~~Gi~vViGTTG 139 (257)
.+.....+..+...|.=+++|..+
T Consensus 226 ~~~~~~~~~~l~~~G~iv~~g~~~ 249 (343)
T 3gaz_A 226 GPVLDASFSAVKRFGHVVSCLGWG 249 (343)
T ss_dssp THHHHHHHHHEEEEEEEEESCCCS
T ss_pred cHHHHHHHHHHhcCCeEEEEcccC
Confidence 655444555444455555555543
No 421
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=92.42 E-value=0.26 Score=44.88 Aligned_cols=64 Identities=16% Similarity=0.185 Sum_probs=43.4
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
..+|+|+| +|+||+.+++.+. .-++++. ++|+.. ..+ ... ..|+. +.++++++. .+|+|+...
T Consensus 165 g~tvgIIG-lG~IG~~vA~~l~-~~G~~V~-~~d~~~-~~~--~~~----~~g~~-~~~l~ell~------~aDvV~l~~ 227 (335)
T 2g76_A 165 GKTLGILG-LGRIGREVATRMQ-SFGMKTI-GYDPII-SPE--VSA----SFGVQ-QLPLEEIWP------LCDFITVHT 227 (335)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHH-TTTCEEE-EECSSS-CHH--HHH----HTTCE-ECCHHHHGG------GCSEEEECC
T ss_pred cCEEEEEe-ECHHHHHHHHHHH-HCCCEEE-EECCCc-chh--hhh----hcCce-eCCHHHHHh------cCCEEEEec
Confidence 46899999 6999999999876 4578876 466532 111 111 23443 358889885 699988765
Q ss_pred C
Q 025154 115 D 115 (257)
Q Consensus 115 ~ 115 (257)
.
T Consensus 228 P 228 (335)
T 2g76_A 228 P 228 (335)
T ss_dssp C
T ss_pred C
Confidence 3
No 422
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=92.42 E-value=0.3 Score=46.11 Aligned_cols=117 Identities=19% Similarity=0.273 Sum_probs=72.3
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecC-----CCCcchhhhhcCCCCCC-e---e-eecCHHHHHhccccC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH-----SVGEDIGMVCDMEQPLE-I---P-VMSDLTMVLGSISQS 104 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~-----~~g~d~g~~~g~~~~~g-v---~-v~~dl~~~l~~~~~~ 104 (257)
..||+|.| .|.+|+..++.+.+ .+.++|++.|+. ..|-|..++.......+ + + -+-+.++++.
T Consensus 221 g~~vaVqG-~GnVG~~aa~~l~e-~GakVVavsD~~G~iyd~~GlD~~~l~~~~~~~g~i~~~~a~~~~~~~i~~----- 293 (424)
T 3k92_A 221 NARIIIQG-FGNAGSFLAKFMHD-AGAKVIGISDANGGLYNPDGLDIPYLLDKRDSFGMVTNLFTDVITNEELLE----- 293 (424)
T ss_dssp GCEEEEEC-CSHHHHHHHHHHHH-HTCEEEEEECSSCEEECTTCCCHHHHHHHCCSSSCCGGGCSCCBCHHHHHH-----
T ss_pred cCEEEEEC-CCHHHHHHHHHHHH-CCCEEEEEECCCCcEECCCCCCHHHHHHHHHHhCCCCCCCcEEecCcccee-----
Confidence 36899999 59999999998764 589999999953 34666655443221222 1 1 1124577776
Q ss_pred CCccEEEEcCChHhH-HHHHHHHHHcCCCeEEeCC-C-CCHHHHHHHHHHhhhcCceEEEccCchH
Q 025154 105 KARAVVIDFTDASTV-YDNVKQATAFGMRSVVYVP-H-IQLETVSALSAFCDKASMGCLIAPTLSI 167 (257)
Q Consensus 105 ~~~DVvIDFT~p~~~-~~~~~~a~~~Gi~vViGTT-G-~s~e~~~~L~~~a~~~gipvl~spNfSl 167 (257)
.++||+|-+...... .+++. +.+..+|++-- + +++|..+.| +++ .|+|.|-+..
T Consensus 294 ~~~DIliPcA~~n~I~~~~a~---~l~ak~V~EgAN~p~t~eA~~iL----~~r--GI~~~PD~~a 350 (424)
T 3k92_A 294 KDCDILVPAAISNQITAKNAH---NIQASIVVERANGPTTIDATKIL----NER--GVLLVPDILA 350 (424)
T ss_dssp SCCSEEEECSCSSCBCTTTGG---GCCCSEEECCSSSCBCHHHHHHH----HHT--TCEEECHHHH
T ss_pred ccccEEeecCcccccChhhHh---hcCceEEEcCCCCCCCHHHHHHH----HHC--CCEEECchHh
Confidence 589999988753322 23333 34888888765 2 455433333 333 4666676654
No 423
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=92.36 E-value=1.5 Score=37.88 Aligned_cols=82 Identities=17% Similarity=0.217 Sum_probs=50.7
Q ss_pred eEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCcc-EEEEcCC
Q 025154 37 KVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFTD 115 (257)
Q Consensus 37 kV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VvIDFT~ 115 (257)
++.|+|++|.+|+.+++.+++ .+.+++. +++.. ....++. +++-+. ...+. +..|.|.
T Consensus 26 ~~lVTGas~GIG~aia~~la~-~G~~V~~-~~r~~--~~~~~~~--------------~~l~~~---~~~~~~~~~Dv~d 84 (279)
T 3sju_A 26 TAFVTGVSSGIGLAVARTLAA-RGIAVYG-CARDA--KNVSAAV--------------DGLRAA---GHDVDGSSCDVTS 84 (279)
T ss_dssp EEEEESTTSHHHHHHHHHHHH-TTCEEEE-EESCH--HHHHHHH--------------HHHHTT---TCCEEEEECCTTC
T ss_pred EEEEeCCCCHHHHHHHHHHHH-CCCEEEE-EeCCH--HHHHHHH--------------HHHHhc---CCcEEEEECCCCC
Confidence 689999999999999998875 5788764 44321 1111110 111110 01222 3458888
Q ss_pred hHhHHHHHHHHHHc--CCCeEEeCCC
Q 025154 116 ASTVYDNVKQATAF--GMRSVVYVPH 139 (257)
Q Consensus 116 p~~~~~~~~~a~~~--Gi~vViGTTG 139 (257)
++...+.+..+.+. ++.+|+-..|
T Consensus 85 ~~~v~~~~~~~~~~~g~id~lv~nAg 110 (279)
T 3sju_A 85 TDEVHAAVAAAVERFGPIGILVNSAG 110 (279)
T ss_dssp HHHHHHHHHHHHHHHCSCCEEEECCC
T ss_pred HHHHHHHHHHHHHHcCCCcEEEECCC
Confidence 88888877776654 6888886655
No 424
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=92.25 E-value=0.21 Score=44.46 Aligned_cols=95 Identities=11% Similarity=0.054 Sum_probs=49.9
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCe--ee-e--cCHHHHHhccccCCCccEE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEI--PV-M--SDLTMVLGSISQSKARAVV 110 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv--~v-~--~dl~~~l~~~~~~~~~DVv 110 (257)
-+|.|+|++|.+|...++.+. ..+.++++...+. .....+. .+|. .+ + .++.+.+.+...+..+|++
T Consensus 150 ~~vlV~Ga~g~iG~~~~~~a~-~~Ga~Vi~~~~~~---~~~~~~~----~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~v 221 (334)
T 3qwb_A 150 DYVLLFAAAGGVGLILNQLLK-MKGAHTIAVASTD---EKLKIAK----EYGAEYLINASKEDILRQVLKFTNGKGVDAS 221 (334)
T ss_dssp CEEEESSTTBHHHHHHHHHHH-HTTCEEEEEESSH---HHHHHHH----HTTCSEEEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCH---HHHHHHH----HcCCcEEEeCCCchHHHHHHHHhCCCCceEE
Confidence 479999988999999998765 5678877654321 1111111 1121 11 1 2222222211112357888
Q ss_pred EEcCChHhHHHHHHHHHHcCCCeEEeCC
Q 025154 111 IDFTDASTVYDNVKQATAFGMRSVVYVP 138 (257)
Q Consensus 111 IDFT~p~~~~~~~~~a~~~Gi~vViGTT 138 (257)
||++-.+.....+......|.=+.+|..
T Consensus 222 id~~g~~~~~~~~~~l~~~G~iv~~G~~ 249 (334)
T 3qwb_A 222 FDSVGKDTFEISLAALKRKGVFVSFGNA 249 (334)
T ss_dssp EECCGGGGHHHHHHHEEEEEEEEECCCT
T ss_pred EECCChHHHHHHHHHhccCCEEEEEcCC
Confidence 8877654444444444445555555543
No 425
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=92.23 E-value=0.21 Score=45.18 Aligned_cols=32 Identities=22% Similarity=0.272 Sum_probs=24.6
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCc-EEEEEEec
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDS 69 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~-eLvg~vd~ 69 (257)
++||+|+|+ |.||..++..+... ++ +|+ .+|.
T Consensus 5 ~~kI~iiGa-G~vG~~~a~~l~~~-~~~~v~-l~Di 37 (321)
T 3p7m_A 5 RKKITLVGA-GNIGGTLAHLALIK-QLGDVV-LFDI 37 (321)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHT-TCCEEE-EECS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhC-CCceEE-EEeC
Confidence 579999996 99999999877654 44 544 5674
No 426
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=92.21 E-value=0.45 Score=39.65 Aligned_cols=85 Identities=19% Similarity=0.180 Sum_probs=47.8
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCcc-EEEEc
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDF 113 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VvIDF 113 (257)
|.++.|+|++|.+|+.+++.+.+ .+.+++. +++.. ....++. +++... ....+. +..|.
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~-~G~~V~~-~~r~~--~~~~~~~--------------~~~~~~--~~~~~~~~~~D~ 61 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALAR-DGYALAL-GARSV--DRLEKIA--------------HELMQE--QGVEVFYHHLDV 61 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHH-TTCEEEE-EESCH--HHHHHHH--------------HHHHHH--HCCCEEEEECCT
T ss_pred CCEEEEECCCcHHHHHHHHHHHH-CCCEEEE-EeCCH--HHHHHHH--------------HHHHhh--cCCeEEEEEecc
Confidence 34689999999999999999875 5777654 34321 1111110 111100 001122 23477
Q ss_pred CChHhHHHHHHHHHHc--CCCeEEeCCC
Q 025154 114 TDASTVYDNVKQATAF--GMRSVVYVPH 139 (257)
Q Consensus 114 T~p~~~~~~~~~a~~~--Gi~vViGTTG 139 (257)
|.++...+.+..+.+. ++.+|+=..|
T Consensus 62 ~~~~~v~~~~~~~~~~~g~id~li~~Ag 89 (235)
T 3l77_A 62 SKAESVEEFSKKVLERFGDVDVVVANAG 89 (235)
T ss_dssp TCHHHHHHHCC-HHHHHSSCSEEEECCC
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEECCc
Confidence 7777777666655543 6777776654
No 427
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=92.19 E-value=0.6 Score=39.49 Aligned_cols=84 Identities=12% Similarity=0.090 Sum_probs=50.1
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCC--cEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCcc-EEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARG--MEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVI 111 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~--~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VvI 111 (257)
+.+|.|+|++|.+|+.+++.+.+... .+++.. ++.... ... ++++... ..... +..
T Consensus 21 ~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~-~r~~~~--~~~---------------~~~l~~~---~~~~~~~~~ 79 (267)
T 1sny_A 21 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTT-CRNREQ--AKE---------------LEDLAKN---HSNIHILEI 79 (267)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEE-ESCTTS--CHH---------------HHHHHHH---CTTEEEEEC
T ss_pred CCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEE-ecChhh--hHH---------------HHHhhcc---CCceEEEEe
Confidence 45799999999999999999886432 777654 332100 000 1111110 01222 345
Q ss_pred EcCChHhHHHHHHHHHHc----CCCeEEeCCC
Q 025154 112 DFTDASTVYDNVKQATAF----GMRSVVYVPH 139 (257)
Q Consensus 112 DFT~p~~~~~~~~~a~~~----Gi~vViGTTG 139 (257)
|++.++...+.+..+.+. ++.+|+=..|
T Consensus 80 Dl~~~~~v~~~~~~~~~~~g~~~id~li~~Ag 111 (267)
T 1sny_A 80 DLRNFDAYDKLVADIEGVTKDQGLNVLFNNAG 111 (267)
T ss_dssp CTTCGGGHHHHHHHHHHHHGGGCCSEEEECCC
T ss_pred cCCChHHHHHHHHHHHHhcCCCCccEEEECCC
Confidence 778888777766655442 5888876655
No 428
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=92.16 E-value=1.2 Score=39.66 Aligned_cols=30 Identities=3% Similarity=0.178 Sum_probs=23.4
Q ss_pred eEEEEcCCChHHHHHHHHHHhcCCcEEEEEE
Q 025154 37 KVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (257)
Q Consensus 37 kV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (257)
+|.|.|++|.+|...++++.. .+.++++..
T Consensus 167 ~vli~gg~g~vG~~a~qla~~-~Ga~Vi~~~ 196 (349)
T 3pi7_A 167 AFVMTAGASQLCKLIIGLAKE-EGFRPIVTV 196 (349)
T ss_dssp EEEESSTTSHHHHHHHHHHHH-HTCEEEEEE
T ss_pred EEEEeCCCcHHHHHHHHHHHH-CCCEEEEEe
Confidence 577777789999999987664 577877654
No 429
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=92.12 E-value=0.7 Score=43.58 Aligned_cols=31 Identities=26% Similarity=0.377 Sum_probs=25.4
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEe
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (257)
.||.|+|+ |..|..+++.++. .++.=+.++|
T Consensus 41 ~~VlvvG~-GGlGs~va~~La~-aGvg~i~ivD 71 (434)
T 1tt5_B 41 CKVLVIGA-GGLGCELLKNLAL-SGFRQIHVID 71 (434)
T ss_dssp CCEEEECS-STHHHHHHHHHHH-TTCCCEEEEE
T ss_pred CEEEEECc-CHHHHHHHHHHHH-cCCCEEEEEc
Confidence 58999996 9999999999874 5665566777
No 430
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=92.11 E-value=1.4 Score=36.97 Aligned_cols=80 Identities=16% Similarity=0.141 Sum_probs=49.1
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCcc-EEEEcC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VvIDFT 114 (257)
.+|.|+|++|.+|+.+++.+.+ .+.+++.. ++.. ....++. +.+. ..+. +..|++
T Consensus 13 k~vlVTGasggiG~~~a~~l~~-~G~~V~~~-~r~~--~~~~~~~---------------~~~~-----~~~~~~~~D~~ 68 (265)
T 2o23_A 13 LVAVITGGASGLGLATAERLVG-QGASAVLL-DLPN--SGGEAQA---------------KKLG-----NNCVFAPADVT 68 (265)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEEE-ECTT--SSHHHHH---------------HHHC-----TTEEEEECCTT
T ss_pred CEEEEECCCChHHHHHHHHHHH-CCCEEEEE-eCCc--HhHHHHH---------------HHhC-----CceEEEEcCCC
Confidence 4799999999999999999875 57887654 4321 1111110 0111 1222 345778
Q ss_pred ChHhHHHHHHHHHHc--CCCeEEeCCC
Q 025154 115 DASTVYDNVKQATAF--GMRSVVYVPH 139 (257)
Q Consensus 115 ~p~~~~~~~~~a~~~--Gi~vViGTTG 139 (257)
.++...+.+..+.+. ++.+|+-..|
T Consensus 69 ~~~~v~~~~~~~~~~~g~id~li~~Ag 95 (265)
T 2o23_A 69 SEKDVQTALALAKGKFGRVDVAVNCAG 95 (265)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHCCCCCEEEECCc
Confidence 887777666655443 6778776554
No 431
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=92.03 E-value=0.077 Score=51.19 Aligned_cols=67 Identities=16% Similarity=0.173 Sum_probs=45.4
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEc
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDF 113 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDF 113 (257)
..++|+|+| +|+||+.+++.+.. -++++++ +|+.. .. .... ..|+... ++++++. .+|+|+-.
T Consensus 141 ~g~~vgIIG-~G~IG~~vA~~l~~-~G~~V~~-~d~~~-~~--~~a~----~~g~~~~-~l~e~~~------~aDvV~l~ 203 (529)
T 1ygy_A 141 FGKTVGVVG-LGRIGQLVAQRIAA-FGAYVVA-YDPYV-SP--ARAA----QLGIELL-SLDDLLA------RADFISVH 203 (529)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHT-TTCEEEE-ECTTS-CH--HHHH----HHTCEEC-CHHHHHH------HCSEEEEC
T ss_pred CCCEEEEEe-eCHHHHHHHHHHHh-CCCEEEE-ECCCC-Ch--hHHH----hcCcEEc-CHHHHHh------cCCEEEEC
Confidence 346999999 69999999998874 5788764 57532 11 1111 2344444 7888885 69998877
Q ss_pred CChH
Q 025154 114 TDAS 117 (257)
Q Consensus 114 T~p~ 117 (257)
+.+.
T Consensus 204 ~P~~ 207 (529)
T 1ygy_A 204 LPKT 207 (529)
T ss_dssp CCCS
T ss_pred CCCc
Confidence 6544
No 432
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=92.02 E-value=0.57 Score=39.29 Aligned_cols=153 Identities=9% Similarity=0.047 Sum_probs=79.1
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeee-e---cCHHHHHhccccCCCccEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-M---SDLTMVLGSISQSKARAVV 110 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v-~---~dl~~~l~~~~~~~~~DVv 110 (257)
..+|.|+|+ |++|+.+++.+.+ .+. +-++|... .....+. .++.+ + .+.+.+.+. .-.++|++
T Consensus 9 ~~~viI~G~-G~~G~~la~~L~~-~g~--v~vid~~~--~~~~~~~-----~~~~~i~gd~~~~~~l~~a--~i~~ad~v 75 (234)
T 2aef_A 9 SRHVVICGW-SESTLECLRELRG-SEV--FVLAEDEN--VRKKVLR-----SGANFVHGDPTRVSDLEKA--NVRGARAV 75 (234)
T ss_dssp -CEEEEESC-CHHHHHHHHHSTT-SEE--EEEESCGG--GHHHHHH-----TTCEEEESCTTCHHHHHHT--TCTTCSEE
T ss_pred CCEEEEECC-ChHHHHHHHHHHh-CCe--EEEEECCH--HHHHHHh-----cCCeEEEcCCCCHHHHHhc--CcchhcEE
Confidence 458999995 9999999998764 455 44666431 1111111 12222 2 233322110 00378988
Q ss_pred EEcCChHhH-HHHHHHHHHcCCC--eEEeCCCCCHHHHHHHHHHhhhcCceEEEccCchHHHHHHH--------HHH-HH
Q 025154 111 IDFTDASTV-YDNVKQATAFGMR--SVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQ--------QAA-IS 178 (257)
Q Consensus 111 IDFT~p~~~-~~~~~~a~~~Gi~--vViGTTG~s~e~~~~L~~~a~~~gipvl~spNfSlGvnll~--------~~a-~~ 178 (257)
|-.+..+.. ...+..|.+.+.+ +|.=. .+++..+.++ +.|+-.+++|....+-.+.. .+. ..
T Consensus 76 i~~~~~d~~n~~~~~~a~~~~~~~~iia~~--~~~~~~~~l~----~~G~~~vi~p~~~~a~~l~~~~~~~~~~~~~~~~ 149 (234)
T 2aef_A 76 IVDLESDSETIHCILGIRKIDESVRIIAEA--ERYENIEQLR----MAGADQVISPFVISGRLMSRSIDDGYEAMFVQDV 149 (234)
T ss_dssp EECCSCHHHHHHHHHHHHHHCSSSEEEEEC--SSGGGHHHHH----HHTCSEEECHHHHHHHHHHHTSSCSHHHHHHHHH
T ss_pred EEcCCCcHHHHHHHHHHHHHCCCCeEEEEE--CCHhHHHHHH----HCCCCEEECHHHHHHHHHHHHHcCccHHHHHHHH
Confidence 866654433 3444556666654 44323 2334444454 45677889998888876532 222 22
Q ss_pred hcCCCCCeEEEeccCCCCCCCCCccHHHH
Q 025154 179 ASFHYKNVEIVESRPNARVRYMTRTLISM 207 (257)
Q Consensus 179 l~~~~~DiEIiE~HH~~K~DapSGTa~~l 207 (257)
+. ...+.++.|..=...-..-+-|..++
T Consensus 150 ~~-~~~~~~~~e~~V~~~s~~~Gk~l~el 177 (234)
T 2aef_A 150 LA-EESTRRMVEVPIPEGSKLEGVSVLDA 177 (234)
T ss_dssp HC----CCEEEEEECCTTBTTTTCBHHHH
T ss_pred hc-CCCCceEEEEEECCCCccCCCCHHHh
Confidence 22 12256777765332211224566555
No 433
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=92.01 E-value=0.082 Score=47.34 Aligned_cols=69 Identities=19% Similarity=0.276 Sum_probs=40.1
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCc-EEEEEEecCC---CC--cchhhhhc-CCCCCCeeeecCHHHHHhccccCCCcc
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDSHS---VG--EDIGMVCD-MEQPLEIPVMSDLTMVLGSISQSKARA 108 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~-eLvg~vd~~~---~g--~d~g~~~g-~~~~~gv~v~~dl~~~l~~~~~~~~~D 108 (257)
|||+|+|+ |.||..++..+....-. +|+ .+|... .| .|...... ...+..+..++| .+.+. ++|
T Consensus 1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~-L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~------~aD 71 (294)
T 1oju_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIA-LVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLK------GSE 71 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEE-EECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGT------TCS
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEE-EEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhC------CCC
Confidence 69999997 99999999887765433 444 566431 01 11111110 101223445667 55664 799
Q ss_pred EEEEc
Q 025154 109 VVIDF 113 (257)
Q Consensus 109 VvIDF 113 (257)
+||-.
T Consensus 72 iVVia 76 (294)
T 1oju_A 72 IIVVT 76 (294)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 88864
No 434
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=91.96 E-value=0.37 Score=44.39 Aligned_cols=50 Identities=24% Similarity=0.250 Sum_probs=26.4
Q ss_pred eeeccccccccccCccccccCCCCCCCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEE
Q 025154 9 HCRMHHISQNVKAKRFISCSTNPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (257)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (257)
|-.-||-|.|+-- ..|+-.+.||+|+|+ |..|+++++.+.+ -+++++.+-
T Consensus 5 ~~~~~~~~~~~~~-------~~~mm~~~~I~ilGg-G~lg~~l~~aa~~-lG~~v~~~d 54 (403)
T 3k5i_A 5 HHHHHHSSENLYF-------QGHMWNSRKVGVLGG-GQLGRMLVESANR-LNIQVNVLD 54 (403)
T ss_dssp -----------------------CCSCCEEEEECC-SHHHHHHHHHHHH-HTCEEEEEE
T ss_pred cccccccccceeE-------eccCCCCCEEEEECC-CHHHHHHHHHHHH-CCCEEEEEE
Confidence 3345666766642 223323469999995 9999999998765 588887654
No 435
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=91.95 E-value=0.15 Score=45.22 Aligned_cols=67 Identities=12% Similarity=0.038 Sum_probs=38.9
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcCC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTD 115 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT~ 115 (257)
.++.|+|+ |.||+.++..+.. .+..-+-++++.. ..+.+++ .......++++++++. .+|+||..|.
T Consensus 118 k~vlvlGa-Gg~g~aia~~L~~-~G~~~v~v~~R~~--~~a~~la---~~~~~~~~~~~~~~~~------~aDiVInaTp 184 (277)
T 3don_A 118 AYILILGA-GGASKGIANELYK-IVRPTLTVANRTM--SRFNNWS---LNINKINLSHAESHLD------EFDIIINTTP 184 (277)
T ss_dssp CCEEEECC-SHHHHHHHHHHHT-TCCSCCEEECSCG--GGGTTCC---SCCEEECHHHHHHTGG------GCSEEEECCC
T ss_pred CEEEEECC-cHHHHHHHHHHHH-CCCCEEEEEeCCH--HHHHHHH---HhcccccHhhHHHHhc------CCCEEEECcc
Confidence 48999996 9999999998874 4663334555431 1122222 1122222445555553 6788886664
No 436
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=91.94 E-value=0.18 Score=44.58 Aligned_cols=31 Identities=16% Similarity=0.266 Sum_probs=24.9
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (257)
-+|.|+|++|.+|+.+++.+.. .+.++++..
T Consensus 142 ~~vlV~Ga~ggiG~~~~~~a~~-~G~~V~~~~ 172 (327)
T 1qor_A 142 EQFLFHAAAGGVGLIACQWAKA-LGAKLIGTV 172 (327)
T ss_dssp CEEEESSTTBHHHHHHHHHHHH-HTCEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHH-cCCEEEEEe
Confidence 4799999899999999997764 467776543
No 437
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=91.87 E-value=0.44 Score=41.21 Aligned_cols=31 Identities=19% Similarity=0.306 Sum_probs=26.5
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (257)
.||.|+|++|.+|+.+++.+.+ .+.++++..
T Consensus 2 k~vlVTGatG~iG~~l~~~L~~-~G~~V~~~~ 32 (322)
T 2p4h_X 2 GRVCVTGGTGFLGSWIIKSLLE-NGYSVNTTI 32 (322)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH-TTCEEEEEC
T ss_pred CEEEEECChhHHHHHHHHHHHH-CCCEEEEEE
Confidence 4799999999999999998875 578888655
No 438
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=91.86 E-value=2.1 Score=36.60 Aligned_cols=85 Identities=14% Similarity=0.211 Sum_probs=48.8
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCcc-EEEEcC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VvIDFT 114 (257)
.+|.|+|++|.+|+.+++.+.+ .+.+++.. ++.. ....++. +++-.. ....... +..|++
T Consensus 33 k~vlVTGasggIG~~la~~l~~-~G~~V~~~-~r~~--~~~~~~~--------------~~~~~~-~~~~~~~~~~~Dl~ 93 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALVQ-QGLKVVGC-ARTV--GNIEELA--------------AECKSA-GYPGTLIPYRCDLS 93 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH-TTCEEEEE-ESCH--HHHHHHH--------------HHHHHT-TCSSEEEEEECCTT
T ss_pred CEEEEECCCchHHHHHHHHHHH-CCCEEEEE-ECCh--HHHHHHH--------------HHHHhc-CCCceEEEEEecCC
Confidence 4699999999999999999875 57887654 4321 1111110 011110 0000111 235788
Q ss_pred ChHhHHHHHHHHHHc--CCCeEEeCCC
Q 025154 115 DASTVYDNVKQATAF--GMRSVVYVPH 139 (257)
Q Consensus 115 ~p~~~~~~~~~a~~~--Gi~vViGTTG 139 (257)
.++.....+..+.+. ++.+|+-..|
T Consensus 94 ~~~~v~~~~~~~~~~~g~iD~vi~~Ag 120 (279)
T 1xg5_A 94 NEEDILSMFSAIRSQHSGVDICINNAG 120 (279)
T ss_dssp CHHHHHHHHHHHHHHHCCCSEEEECCC
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence 888777666654432 6888876655
No 439
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=91.85 E-value=0.81 Score=38.76 Aligned_cols=33 Identities=9% Similarity=0.208 Sum_probs=25.5
Q ss_pred CCCceEEEEcCCChHHHHHHHHHHhcCCcEEEEE
Q 025154 33 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGA 66 (257)
Q Consensus 33 ~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~ 66 (257)
.++.+|.|+|++|.+|+.+++.+.+ .+.+++..
T Consensus 20 ~m~k~vlITGas~gIG~~la~~l~~-~G~~V~~~ 52 (251)
T 3orf_A 20 HMSKNILVLGGSGALGAEVVKFFKS-KSWNTISI 52 (251)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHH-TTCEEEEE
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHH-CCCEEEEE
Confidence 3345799999999999999998875 57886643
No 440
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=91.80 E-value=1.3 Score=41.26 Aligned_cols=139 Identities=17% Similarity=0.116 Sum_probs=76.3
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCC--CcchhhhhcCCCCCCeeee--cCHHHHHhccccCCCccEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSV--GEDIGMVCDMEQPLEIPVM--SDLTMVLGSISQSKARAVV 110 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~--g~d~g~~~g~~~~~gv~v~--~dl~~~l~~~~~~~~~DVv 110 (257)
..||.|+|. |+.|...++.+. ..++++.+ .|.... ......+. ..|++++ .+.+++++ ..+|+|
T Consensus 9 ~k~v~viG~-G~sG~s~A~~l~-~~G~~V~~-~D~~~~~~~~~~~~L~----~~gi~~~~g~~~~~~~~-----~~~d~v 76 (451)
T 3lk7_A 9 NKKVLVLGL-ARSGEAAARLLA-KLGAIVTV-NDGKPFDENPTAQSLL----EEGIKVVCGSHPLELLD-----EDFCYM 76 (451)
T ss_dssp TCEEEEECC-TTTHHHHHHHHH-HTTCEEEE-EESSCGGGCHHHHHHH----HTTCEEEESCCCGGGGG-----SCEEEE
T ss_pred CCEEEEEee-CHHHHHHHHHHH-hCCCEEEE-EeCCcccCChHHHHHH----hCCCEEEECCChHHhhc-----CCCCEE
Confidence 358999996 999999987665 56888765 674321 11112221 3466664 23444553 138988
Q ss_pred EEcC-ChHhHHHHHHHHHHcCCCeE--------------EeCCCCCH--HHHHHHHHHhhhcCceEEEccCchHHHHHHH
Q 025154 111 IDFT-DASTVYDNVKQATAFGMRSV--------------VYVPHIQL--ETVSALSAFCDKASMGCLIAPTLSIGSILLQ 173 (257)
Q Consensus 111 IDFT-~p~~~~~~~~~a~~~Gi~vV--------------iGTTG~s~--e~~~~L~~~a~~~gipvl~spNfSlGvnll~ 173 (257)
|--+ .|.. .+.+..|.+.|+|++ ||-||-+- -....|..+-++.|..+....|+......+
T Consensus 77 v~spgi~~~-~p~~~~a~~~gi~v~~~~e~~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g~~~~~~Gnig~~~~~~- 154 (451)
T 3lk7_A 77 IKNPGIPYN-NPMVKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNAGGQRGLLAGNIGFPASEV- 154 (451)
T ss_dssp EECTTSCTT-SHHHHHHHHTTCCEECHHHHHHHHCCSEEEEEECSSCHHHHHHHHHHHHHHTTCCEEEEETSSSCHHHH-
T ss_pred EECCcCCCC-ChhHHHHHHCCCcEEeHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhcCCCEEEeeecChhhhhh-
Confidence 7543 2322 234566667776644 55555321 122345555566666667778854433211
Q ss_pred HHHHHhcCCCCCeEEEec
Q 025154 174 QAAISASFHYKNVEIVES 191 (257)
Q Consensus 174 ~~a~~l~~~~~DiEIiE~ 191 (257)
. ......|+-|+|.
T Consensus 155 --~--~~~~~~d~~VlE~ 168 (451)
T 3lk7_A 155 --V--QAANDKDTLVMEL 168 (451)
T ss_dssp --T--TTCCTTCEEEEEC
T ss_pred --h--hcCCCCCEEEEEC
Confidence 1 1112468888885
No 441
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=91.79 E-value=0.22 Score=45.35 Aligned_cols=62 Identities=18% Similarity=0.114 Sum_probs=42.0
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
-++|+|+| +|+||+.+++.+. .-++++.+ +|+.. ..... ..++. +.++++++. .+|+|+-..
T Consensus 141 g~tvgIiG-~G~IG~~vA~~l~-~~G~~V~~-~d~~~--~~~~~------~~g~~-~~~l~ell~------~aDvV~l~~ 202 (334)
T 2pi1_A 141 RLTLGVIG-TGRIGSRVAMYGL-AFGMKVLC-YDVVK--REDLK------EKGCV-YTSLDELLK------ESDVISLHV 202 (334)
T ss_dssp GSEEEEEC-CSHHHHHHHHHHH-HTTCEEEE-ECSSC--CHHHH------HTTCE-ECCHHHHHH------HCSEEEECC
T ss_pred CceEEEEC-cCHHHHHHHHHHH-HCcCEEEE-ECCCc--chhhH------hcCce-ecCHHHHHh------hCCEEEEeC
Confidence 46899999 6999999999876 45888764 56431 11110 12333 345999986 699988654
No 442
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=91.73 E-value=1.5 Score=37.52 Aligned_cols=83 Identities=19% Similarity=0.223 Sum_probs=49.6
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCcc-EEEEcC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VvIDFT 114 (257)
.+|.|+|++|.+|+.+++.+.+ .+.+++. +++.. ....++. +++-+. ..+.. +..|++
T Consensus 32 k~vlITGasggIG~~la~~L~~-~G~~V~~-~~r~~--~~~~~~~--------------~~l~~~---~~~~~~~~~Dl~ 90 (272)
T 1yb1_A 32 EIVLITGAGHGIGRLTAYEFAK-LKSKLVL-WDINK--HGLEETA--------------AKCKGL---GAKVHTFVVDCS 90 (272)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEE-EESCH--HHHHHHH--------------HHHHHT---TCCEEEEECCTT
T ss_pred CEEEEECCCchHHHHHHHHHHH-CCCEEEE-EEcCH--HHHHHHH--------------HHHHhc---CCeEEEEEeeCC
Confidence 5799999999999999999875 4788665 44321 1111110 011110 01222 346778
Q ss_pred ChHhHHHHHHHHHHc--CCCeEEeCCC
Q 025154 115 DASTVYDNVKQATAF--GMRSVVYVPH 139 (257)
Q Consensus 115 ~p~~~~~~~~~a~~~--Gi~vViGTTG 139 (257)
.++...+.+..+.+. ++.+||-..|
T Consensus 91 ~~~~v~~~~~~~~~~~g~iD~li~~Ag 117 (272)
T 1yb1_A 91 NREDIYSSAKKVKAEIGDVSILVNNAG 117 (272)
T ss_dssp CHHHHHHHHHHHHHHTCCCSEEEECCC
T ss_pred CHHHHHHHHHHHHHHCCCCcEEEECCC
Confidence 888777766655543 6788876665
No 443
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=91.72 E-value=0.62 Score=45.66 Aligned_cols=32 Identities=22% Similarity=0.353 Sum_probs=27.1
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (257)
+++|.|+|++|.+|+.+++.+.+ .+.+++++.
T Consensus 11 ~~~ilVTGatG~IG~~l~~~L~~-~G~~V~~~~ 42 (699)
T 1z45_A 11 SKIVLVTGGAGYIGSHTVVELIE-NGYDCVVAD 42 (699)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHH-CcCEEEEEE
Confidence 46899999999999999998875 478887654
No 444
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=91.69 E-value=0.21 Score=45.98 Aligned_cols=109 Identities=16% Similarity=0.221 Sum_probs=64.6
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
-.+|+|.| .|++|+.+++.+. .-+++++ +.|+.. +..++. ..++.... +.++++. .++||++=..
T Consensus 175 GktV~I~G-~GnVG~~~A~~l~-~~GakVv-vsD~~~---~~~~~a---~~~ga~~v-~~~ell~-----~~~DIliP~A 239 (355)
T 1c1d_A 175 GLTVLVQG-LGAVGGSLASLAA-EAGAQLL-VADTDT---ERVAHA---VALGHTAV-ALEDVLS-----TPCDVFAPCA 239 (355)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHH-HTTCEEE-EECSCH---HHHHHH---HHTTCEEC-CGGGGGG-----CCCSEEEECS
T ss_pred CCEEEEEC-cCHHHHHHHHHHH-HCCCEEE-EEeCCc---cHHHHH---HhcCCEEe-ChHHhhc-----CccceecHhH
Confidence 35899999 5999999999876 4589999 888541 101111 12343332 5667775 3789988544
Q ss_pred ChHhH-HHHHHHHHHcCCCeEEeCCC--CCHHHHHHHHHHhhhcCceEEEccCch
Q 025154 115 DASTV-YDNVKQATAFGMRSVVYVPH--IQLETVSALSAFCDKASMGCLIAPTLS 166 (257)
Q Consensus 115 ~p~~~-~~~~~~a~~~Gi~vViGTTG--~s~e~~~~L~~~a~~~gipvl~spNfS 166 (257)
..... .+++. ..+..+|+++.. ++.++. .+ +-+++ .+++.|-+.
T Consensus 240 ~~~~I~~~~~~---~lk~~iVie~AN~p~t~~eA--~~-~L~~~--gIlv~Pd~~ 286 (355)
T 1c1d_A 240 MGGVITTEVAR---TLDCSVVAGAANNVIADEAA--SD-ILHAR--GILYAPDFV 286 (355)
T ss_dssp CSCCBCHHHHH---HCCCSEECCSCTTCBCSHHH--HH-HHHHT--TCEECCHHH
T ss_pred HHhhcCHHHHh---hCCCCEEEECCCCCCCCHHH--HH-HHHhC--CEEEECCeE
Confidence 43222 23332 447889998874 333232 23 33443 466666544
No 445
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=91.67 E-value=0.21 Score=45.32 Aligned_cols=63 Identities=14% Similarity=0.110 Sum_probs=42.5
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
..+|+|+| +|+||+.+++.+. .-++++. ++|+.. ..... .. +...+++++++. .+|+|+...
T Consensus 146 g~~vgIiG-~G~IG~~~A~~l~-~~G~~V~-~~d~~~-~~~~~-------~~-~~~~~~l~ell~------~aDvV~l~~ 207 (333)
T 1j4a_A 146 DQVVGVVG-TGHIGQVFMQIME-GFGAKVI-TYDIFR-NPELE-------KK-GYYVDSLDDLYK------QADVISLHV 207 (333)
T ss_dssp GSEEEEEC-CSHHHHHHHHHHH-HTTCEEE-EECSSC-CHHHH-------HT-TCBCSCHHHHHH------HCSEEEECS
T ss_pred CCEEEEEc-cCHHHHHHHHHHH-HCCCEEE-EECCCc-chhHH-------hh-CeecCCHHHHHh------hCCEEEEcC
Confidence 36899999 5999999999876 4578875 466532 11111 11 223358889885 699988765
Q ss_pred C
Q 025154 115 D 115 (257)
Q Consensus 115 ~ 115 (257)
.
T Consensus 208 p 208 (333)
T 1j4a_A 208 P 208 (333)
T ss_dssp C
T ss_pred C
Confidence 3
No 446
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=91.65 E-value=0.84 Score=38.73 Aligned_cols=82 Identities=23% Similarity=0.217 Sum_probs=48.1
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCcc-EEEEcC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VvIDFT 114 (257)
.+|.|+|++|.+|+.+++.+.+ .+.+++.. ++.. ....++. +.+.. ..... +..|++
T Consensus 17 k~vlITGasggiG~~~a~~l~~-~G~~V~~~-~r~~--~~~~~~~---------------~~~~~---~~~~~~~~~D~~ 74 (278)
T 2bgk_A 17 KVAIITGGAGGIGETTAKLFVR-YGAKVVIA-DIAD--DHGQKVC---------------NNIGS---PDVISFVHCDVT 74 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH-TTCEEEEE-ESCH--HHHHHHH---------------HHHCC---TTTEEEEECCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHH-CCCEEEEE-cCCh--hHHHHHH---------------HHhCC---CCceEEEECCCC
Confidence 5799999999999999999875 57887654 4321 0011110 11110 00122 345778
Q ss_pred ChHhHHHHHHHHHHc--CCCeEEeCCC
Q 025154 115 DASTVYDNVKQATAF--GMRSVVYVPH 139 (257)
Q Consensus 115 ~p~~~~~~~~~a~~~--Gi~vViGTTG 139 (257)
.++.....+..+.+. ++.+|+-..|
T Consensus 75 ~~~~~~~~~~~~~~~~~~id~li~~Ag 101 (278)
T 2bgk_A 75 KDEDVRNLVDTTIAKHGKLDIMFGNVG 101 (278)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence 887776666555433 6888874443
No 447
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=91.55 E-value=0.29 Score=43.83 Aligned_cols=34 Identities=26% Similarity=0.394 Sum_probs=25.2
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCc-EEEEEEecC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDSH 70 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~-eLvg~vd~~ 70 (257)
++||+|+|+ |.||..++..+....-. +|+ .+|..
T Consensus 6 ~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~-l~Di~ 40 (316)
T 1ldn_A 6 GARVVVIGA-GFVGASYVFALMNQGIADEIV-LIDAN 40 (316)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHHTCCSEEE-EECSS
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCCCEEE-EEeCC
Confidence 579999997 99999999887655322 444 56743
No 448
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=91.45 E-value=0.23 Score=44.14 Aligned_cols=31 Identities=26% Similarity=0.313 Sum_probs=24.9
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (257)
-+|.|+|++|.+|+.+++.+.. .+.++++..
T Consensus 147 ~~vlV~Ga~ggiG~~~~~~a~~-~G~~Vi~~~ 177 (333)
T 1wly_A 147 DYVLIHAAAGGMGHIMVPWARH-LGATVIGTV 177 (333)
T ss_dssp CEEEETTTTSTTHHHHHHHHHH-TTCEEEEEE
T ss_pred CEEEEECCccHHHHHHHHHHHH-CCCEEEEEe
Confidence 4799999999999999987764 577876543
No 449
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=91.40 E-value=0.53 Score=43.16 Aligned_cols=30 Identities=33% Similarity=0.354 Sum_probs=23.3
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCc-EEEEEEe
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGM-EVAGAID 68 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~-eLvg~vd 68 (257)
-+|.|+|+ |.+|...++++. .-+. ++++ ++
T Consensus 215 ~~VlV~Ga-G~vG~~aiqlak-~~Ga~~Vi~-~~ 245 (404)
T 3ip1_A 215 DNVVILGG-GPIGLAAVAILK-HAGASKVIL-SE 245 (404)
T ss_dssp CEEEEECC-SHHHHHHHHHHH-HTTCSEEEE-EC
T ss_pred CEEEEECC-CHHHHHHHHHHH-HcCCCEEEE-EC
Confidence 37999997 999999998765 5677 6665 44
No 450
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=91.38 E-value=1.4 Score=37.31 Aligned_cols=85 Identities=13% Similarity=0.179 Sum_probs=52.9
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCcc-EEEEc
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDF 113 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VvIDF 113 (257)
|.++.|+|++|.+|+.+++.+.+ .+.+++....+.. .....+ .+.+... ...+. +..|.
T Consensus 7 ~k~vlVTGas~gIG~~~a~~l~~-~G~~v~~~~~~~~--~~~~~~---------------~~~~~~~--~~~~~~~~~Dl 66 (264)
T 3i4f_A 7 VRHALITAGTKGLGKQVTEKLLA-KGYSVTVTYHSDT--TAMETM---------------KETYKDV--EERLQFVQADV 66 (264)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHH-TTCEEEEEESSCH--HHHHHH---------------HHHTGGG--GGGEEEEECCT
T ss_pred cCEEEEeCCCchhHHHHHHHHHH-CCCEEEEEcCCCh--HHHHHH---------------HHHHHhc--CCceEEEEecC
Confidence 44689999999999999998875 5788876544321 000100 1111100 01222 34688
Q ss_pred CChHhHHHHHHHHHHc--CCCeEEeCCC
Q 025154 114 TDASTVYDNVKQATAF--GMRSVVYVPH 139 (257)
Q Consensus 114 T~p~~~~~~~~~a~~~--Gi~vViGTTG 139 (257)
+.++...+.+..+.+. ++.+|+=..|
T Consensus 67 ~~~~~v~~~~~~~~~~~g~id~lv~~Ag 94 (264)
T 3i4f_A 67 TKKEDLHKIVEEAMSHFGKIDFLINNAG 94 (264)
T ss_dssp TSHHHHHHHHHHHHHHHSCCCEEECCCC
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEECCc
Confidence 9888888877776654 7888886666
No 451
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=91.34 E-value=0.99 Score=38.83 Aligned_cols=81 Identities=19% Similarity=0.204 Sum_probs=50.8
Q ss_pred eEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCcc---EEEEc
Q 025154 37 KVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA---VVIDF 113 (257)
Q Consensus 37 kV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D---VvIDF 113 (257)
.+.|+|++|.+|+.+++.+.+ .+..++....+.. ....++. +.+.. ...+ +..|.
T Consensus 29 ~~lVTGas~GIG~aia~~la~-~G~~Vv~~~~~~~--~~~~~~~---------------~~~~~----~~~~~~~~~~Dl 86 (267)
T 3u5t_A 29 VAIVTGASRGIGAAIAARLAS-DGFTVVINYAGKA--AAAEEVA---------------GKIEA----AGGKALTAQADV 86 (267)
T ss_dssp EEEEESCSSHHHHHHHHHHHH-HTCEEEEEESSCS--HHHHHHH---------------HHHHH----TTCCEEEEECCT
T ss_pred EEEEeCCCCHHHHHHHHHHHH-CCCEEEEEcCCCH--HHHHHHH---------------HHHHh----cCCeEEEEEcCC
Confidence 589999999999999998875 4788775444321 1111111 11111 1122 34588
Q ss_pred CChHhHHHHHHHHHHc--CCCeEEeCCC
Q 025154 114 TDASTVYDNVKQATAF--GMRSVVYVPH 139 (257)
Q Consensus 114 T~p~~~~~~~~~a~~~--Gi~vViGTTG 139 (257)
|.++...+.+..+.+. ++.+++-..|
T Consensus 87 ~~~~~v~~~~~~~~~~~g~iD~lvnnAG 114 (267)
T 3u5t_A 87 SDPAAVRRLFATAEEAFGGVDVLVNNAG 114 (267)
T ss_dssp TCHHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 8888888877776654 6777776554
No 452
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=91.32 E-value=0.15 Score=46.04 Aligned_cols=34 Identities=21% Similarity=0.258 Sum_probs=25.6
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEec
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~ 69 (257)
.+||+|+|+ |.+|..++-.+...+-+.=+..+|.
T Consensus 5 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di 38 (318)
T 1ez4_A 5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDV 38 (318)
T ss_dssp BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeC
Confidence 389999997 9999999988776643433445774
No 453
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=91.32 E-value=0.25 Score=44.79 Aligned_cols=63 Identities=17% Similarity=0.319 Sum_probs=42.0
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
-.+|+|+| +|+||+.+++.+. .-++++.+ +|+.. .....+ .....+.++++++. .+|+|+-..
T Consensus 137 gktvGIiG-lG~IG~~vA~~l~-~~G~~V~~-~dr~~--~~~~~~------~~~~~~~~l~ell~------~aDvV~l~l 199 (324)
T 3evt_A 137 GQQLLIYG-TGQIGQSLAAKAS-ALGMHVIG-VNTTG--HPADHF------HETVAFTATADALA------TANFIVNAL 199 (324)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHH-HTTCEEEE-EESSC--CCCTTC------SEEEEGGGCHHHHH------HCSEEEECC
T ss_pred CCeEEEEC-cCHHHHHHHHHHH-hCCCEEEE-ECCCc--chhHhH------hhccccCCHHHHHh------hCCEEEEcC
Confidence 46899999 6999999999876 45898875 56431 111110 01122467888886 689988654
No 454
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=91.32 E-value=0.19 Score=43.34 Aligned_cols=34 Identities=26% Similarity=0.302 Sum_probs=27.8
Q ss_pred CCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEe
Q 025154 34 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (257)
Q Consensus 34 ~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (257)
.|+||.|+|++|.+|+.+++.+.+. +.++++...
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r 39 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVAS-GEEVTVLDD 39 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT-TCCEEEECC
T ss_pred CCCeEEEECCCChHHHHHHHHHHHC-CCEEEEEec
Confidence 3679999999999999999998864 778776543
No 455
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=91.29 E-value=0.77 Score=37.99 Aligned_cols=80 Identities=14% Similarity=0.155 Sum_probs=49.3
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCC--cEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCcc-EEEE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARG--MEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVID 112 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~--~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VvID 112 (257)
.+|.|+|++|.+|+.+++.+.+. + .+++.. ++.. ....++. +. .. .... +..|
T Consensus 4 k~vlItGasggiG~~la~~l~~~-g~~~~V~~~-~r~~--~~~~~l~---------------~~-~~----~~~~~~~~D 59 (250)
T 1yo6_A 4 GSVVVTGANRGIGLGLVQQLVKD-KNIRHIIAT-ARDV--EKATELK---------------SI-KD----SRVHVLPLT 59 (250)
T ss_dssp SEEEESSCSSHHHHHHHHHHHTC-TTCCEEEEE-ESSG--GGCHHHH---------------TC-CC----TTEEEEECC
T ss_pred CEEEEecCCchHHHHHHHHHHhc-CCCcEEEEE-ecCH--HHHHHHH---------------hc-cC----CceEEEEee
Confidence 47999999999999999998864 5 777654 3321 1111111 00 00 1222 3467
Q ss_pred cCChHhHHHHHHHHHHc----CCCeEEeCCC
Q 025154 113 FTDASTVYDNVKQATAF----GMRSVVYVPH 139 (257)
Q Consensus 113 FT~p~~~~~~~~~a~~~----Gi~vViGTTG 139 (257)
++.++...+.+..+.+. ++.+|+-..|
T Consensus 60 ~~~~~~~~~~~~~~~~~~g~~~id~li~~Ag 90 (250)
T 1yo6_A 60 VTCDKSLDTFVSKVGEIVGSDGLSLLINNAG 90 (250)
T ss_dssp TTCHHHHHHHHHHHHHHHGGGCCCEEEECCC
T ss_pred cCCHHHHHHHHHHHHHhcCCCCCcEEEECCc
Confidence 88888777766655443 6888876655
No 456
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=91.25 E-value=1.9 Score=37.61 Aligned_cols=83 Identities=20% Similarity=0.117 Sum_probs=49.5
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCcc-EEEEcC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VvIDFT 114 (257)
.+|.|+|++|.+|+.+++.+.+ .+.+++.. ++.. ....++. +++-+. ...+. +..|.+
T Consensus 35 k~vlVTGas~gIG~aia~~L~~-~G~~V~~~-~r~~--~~~~~~~--------------~~l~~~---~~~~~~~~~Dv~ 93 (291)
T 3cxt_A 35 KIALVTGASYGIGFAIASAYAK-AGATIVFN-DINQ--ELVDRGM--------------AAYKAA---GINAHGYVCDVT 93 (291)
T ss_dssp CEEEEETCSSHHHHHHHHHHHH-TTCEEEEE-ESSH--HHHHHHH--------------HHHHHT---TCCCEEEECCTT
T ss_pred CEEEEeCCCcHHHHHHHHHHHH-CCCEEEEE-eCCH--HHHHHHH--------------HHHHhc---CCeEEEEEecCC
Confidence 4799999999999999998875 57887653 4321 1111110 111110 01222 346888
Q ss_pred ChHhHHHHHHHHHHc--CCCeEEeCCC
Q 025154 115 DASTVYDNVKQATAF--GMRSVVYVPH 139 (257)
Q Consensus 115 ~p~~~~~~~~~a~~~--Gi~vViGTTG 139 (257)
.++...+.+..+.+. ++.+|+-..|
T Consensus 94 d~~~v~~~~~~~~~~~g~iD~lvnnAg 120 (291)
T 3cxt_A 94 DEDGIQAMVAQIESEVGIIDILVNNAG 120 (291)
T ss_dssp CHHHHHHHHHHHHHHTCCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHcCCCcEEEECCC
Confidence 888877777665543 4788876554
No 457
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=91.13 E-value=3.8 Score=36.81 Aligned_cols=88 Identities=19% Similarity=0.303 Sum_probs=53.2
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCcc---EEEE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA---VVID 112 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D---VvID 112 (257)
..|.|+|++|.+|+++++.+++ .+.+++........... + ...++++.+++. ..... +..|
T Consensus 46 k~vlVTGas~GIG~aia~~La~-~Ga~Vvl~~r~~~~~~~---l-----------~~~l~~~~~~~~-~~g~~~~~~~~D 109 (346)
T 3kvo_A 46 CTVFITGASRGIGKAIALKAAK-DGANIVIAAKTAQPHPK---L-----------LGTIYTAAEEIE-AVGGKALPCIVD 109 (346)
T ss_dssp CEEEEETTTSHHHHHHHHHHHT-TTCEEEEEESCCSCCSS---S-----------CCCHHHHHHHHH-HTTCEEEEEECC
T ss_pred CEEEEeCCChHHHHHHHHHHHH-CCCEEEEEECChhhhhh---h-----------HHHHHHHHHHHH-hcCCeEEEEEcc
Confidence 3689999999999999998875 57887654332111100 0 011111111000 01222 3468
Q ss_pred cCChHhHHHHHHHHHHc--CCCeEEeCCC
Q 025154 113 FTDASTVYDNVKQATAF--GMRSVVYVPH 139 (257)
Q Consensus 113 FT~p~~~~~~~~~a~~~--Gi~vViGTTG 139 (257)
.+.++.+...+..+.+. ++.+||=..|
T Consensus 110 v~d~~~v~~~~~~~~~~~g~iDilVnnAG 138 (346)
T 3kvo_A 110 VRDEQQISAAVEKAIKKFGGIDILVNNAS 138 (346)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 89999988888877765 8898886655
No 458
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=91.00 E-value=0.42 Score=42.40 Aligned_cols=31 Identities=29% Similarity=0.418 Sum_probs=25.5
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (257)
-+|.|+|++|.+|..+++++. ..+.++++..
T Consensus 151 ~~vlI~Ga~g~iG~~~~~~a~-~~Ga~Vi~~~ 181 (336)
T 4b7c_A 151 ETVVISGAAGAVGSVAGQIAR-LKGCRVVGIA 181 (336)
T ss_dssp CEEEESSTTSHHHHHHHHHHH-HTTCEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHH-HCCCEEEEEe
Confidence 479999999999999998766 5678887654
No 459
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=90.99 E-value=0.4 Score=42.47 Aligned_cols=94 Identities=17% Similarity=0.219 Sum_probs=49.7
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCe--ee-e---cCHHHHHhccccCCCccE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEI--PV-M---SDLTMVLGSISQSKARAV 109 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv--~v-~---~dl~~~l~~~~~~~~~DV 109 (257)
-+|.|+|++|.+|+.+++.+. ..+.++++. ++.. .....+. .+|. .+ + .++.+.+.+... ..+|+
T Consensus 147 ~~vlV~Ga~ggiG~~~~~~~~-~~G~~V~~~-~~~~--~~~~~~~----~~g~~~~~d~~~~~~~~~~~~~~~~-~~~d~ 217 (333)
T 1v3u_A 147 ETVLVSAAAGAVGSVVGQIAK-LKGCKVVGA-AGSD--EKIAYLK----QIGFDAAFNYKTVNSLEEALKKASP-DGYDC 217 (333)
T ss_dssp CEEEEESTTBHHHHHHHHHHH-HTTCEEEEE-ESSH--HHHHHHH----HTTCSEEEETTSCSCHHHHHHHHCT-TCEEE
T ss_pred CEEEEecCCCcHHHHHHHHHH-HCCCEEEEE-eCCH--HHHHHHH----hcCCcEEEecCCHHHHHHHHHHHhC-CCCeE
Confidence 479999999999999998766 467787754 4321 1111111 1111 11 1 234443332111 25899
Q ss_pred EEEcCChHhHHHHHHHHHHcCCCeEEeCC
Q 025154 110 VIDFTDASTVYDNVKQATAFGMRSVVYVP 138 (257)
Q Consensus 110 vIDFT~p~~~~~~~~~a~~~Gi~vViGTT 138 (257)
+||.+-.+.....+......|.=+++|..
T Consensus 218 vi~~~g~~~~~~~~~~l~~~G~~v~~g~~ 246 (333)
T 1v3u_A 218 YFDNVGGEFLNTVLSQMKDFGKIAICGAI 246 (333)
T ss_dssp EEESSCHHHHHHHHTTEEEEEEEEECCCC
T ss_pred EEECCChHHHHHHHHHHhcCCEEEEEecc
Confidence 99888654433333333334554555644
No 460
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=90.91 E-value=0.64 Score=41.29 Aligned_cols=31 Identities=29% Similarity=0.430 Sum_probs=24.0
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCc--EEEEEEec
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGM--EVAGAIDS 69 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~--eLvg~vd~ 69 (257)
|||+|+|+ |.||..++..+... ++ +|+ .+|.
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~-g~~~eV~-L~D~ 33 (304)
T 2v6b_A 1 MKVGVVGT-GFVGSTAAFALVLR-GSCSELV-LVDR 33 (304)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHT-TCCSEEE-EECS
T ss_pred CEEEEECC-CHHHHHHHHHHHhC-CCCCEEE-EEeC
Confidence 59999997 99999999877654 55 554 5664
No 461
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=90.89 E-value=3.3 Score=35.46 Aligned_cols=83 Identities=13% Similarity=0.090 Sum_probs=49.8
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCcc-EEEEcC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VvIDFT 114 (257)
.++.|+|++|.+|+.+++.+.+ .+.+++. +++.. ....++. +++-+. ..++. +..|.+
T Consensus 23 k~vlVTGas~gIG~~ia~~l~~-~G~~V~~-~~r~~--~~~~~~~--------------~~l~~~---~~~~~~~~~Dv~ 81 (277)
T 2rhc_B 23 EVALVTGATSGIGLEIARRLGK-EGLRVFV-CARGE--EGLRTTL--------------KELREA---GVEADGRTCDVR 81 (277)
T ss_dssp CEEEEETCSSHHHHHHHHHHHH-TTCEEEE-EESCH--HHHHHHH--------------HHHHHT---TCCEEEEECCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHH-CCCEEEE-EeCCH--HHHHHHH--------------HHHHhc---CCceEEEECCCC
Confidence 4799999999999999998875 5788765 44321 1111110 111110 01222 346788
Q ss_pred ChHhHHHHHHHHHHc--CCCeEEeCCC
Q 025154 115 DASTVYDNVKQATAF--GMRSVVYVPH 139 (257)
Q Consensus 115 ~p~~~~~~~~~a~~~--Gi~vViGTTG 139 (257)
.++.....+..+.+. ++.+|+=..|
T Consensus 82 ~~~~v~~~~~~~~~~~g~iD~lv~~Ag 108 (277)
T 2rhc_B 82 SVPEIEALVAAVVERYGPVDVLVNNAG 108 (277)
T ss_dssp CHHHHHHHHHHHHHHTCSCSEEEECCC
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence 888877777665543 5788876554
No 462
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=90.86 E-value=0.58 Score=41.66 Aligned_cols=97 Identities=8% Similarity=0.011 Sum_probs=52.9
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeee-e--cCHHHHHhccccCCCccEEEE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-M--SDLTMVLGSISQSKARAVVID 112 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v-~--~dl~~~l~~~~~~~~~DVvID 112 (257)
-+|.|+|+.|.+|...++++. ..+.++++...+...-..+.+ +|. ...+ + .++.+.+.++..+..+|++||
T Consensus 146 ~~VlV~Ga~g~iG~~~~~~a~-~~Ga~Vi~~~~~~~~~~~~~~-lga----~~~~~~~~~~~~~~~~~~~~~~g~Dvvid 219 (340)
T 3gms_A 146 DVLLVNACGSAIGHLFAQLSQ-ILNFRLIAVTRNNKHTEELLR-LGA----AYVIDTSTAPLYETVMELTNGIGADAAID 219 (340)
T ss_dssp CEEEESSTTSHHHHHHHHHHH-HHTCEEEEEESSSTTHHHHHH-HTC----SEEEETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred CEEEEeCCccHHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHh-CCC----cEEEeCCcccHHHHHHHHhCCCCCcEEEE
Confidence 479999997899999998766 457887765433211111111 111 1111 1 233332221111236899999
Q ss_pred cCChHhHHHHHHHHHHcCCCeEEeCC
Q 025154 113 FTDASTVYDNVKQATAFGMRSVVYVP 138 (257)
Q Consensus 113 FT~p~~~~~~~~~a~~~Gi~vViGTT 138 (257)
++-.......+......|.=+.+|..
T Consensus 220 ~~g~~~~~~~~~~l~~~G~iv~~G~~ 245 (340)
T 3gms_A 220 SIGGPDGNELAFSLRPNGHFLTIGLL 245 (340)
T ss_dssp SSCHHHHHHHHHTEEEEEEEEECCCT
T ss_pred CCCChhHHHHHHHhcCCCEEEEEeec
Confidence 88766665555444445555556654
No 463
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=90.84 E-value=0.49 Score=42.29 Aligned_cols=32 Identities=28% Similarity=0.429 Sum_probs=25.9
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEe
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAID 68 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd 68 (257)
-+|.|+|++|.+|...++.+. ..+.++++...
T Consensus 161 ~~VlV~Gasg~iG~~~~~~a~-~~Ga~Vi~~~~ 192 (342)
T 4eye_A 161 ETVLVLGAAGGIGTAAIQIAK-GMGAKVIAVVN 192 (342)
T ss_dssp CEEEESSTTSHHHHHHHHHHH-HTTCEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHH-HcCCEEEEEeC
Confidence 379999999999999998765 56788876554
No 464
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=90.83 E-value=0.47 Score=42.57 Aligned_cols=33 Identities=30% Similarity=0.355 Sum_probs=24.8
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCc-EEEEEEec
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGM-EVAGAIDS 69 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~-eLvg~vd~ 69 (257)
++||+|+|+ |.+|..++-.+....-+ +|+ .+|.
T Consensus 7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~-L~Di 40 (318)
T 1y6j_A 7 RSKVAIIGA-GFVGASAAFTMALRQTANELV-LIDV 40 (318)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHHTTCSSEEE-EECC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCEEE-EEeC
Confidence 579999997 99999999887755322 454 5674
No 465
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=90.82 E-value=1 Score=38.85 Aligned_cols=83 Identities=22% Similarity=0.319 Sum_probs=50.8
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCc-cEEEEcC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKAR-AVVIDFT 114 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~-DVvIDFT 114 (257)
..+.|.|++|.+|+.+++.+.+ .+.+++.. ++.. ....++. ..+.+. . ... -+..|.+
T Consensus 29 k~~lVTGas~GIG~aia~~la~-~G~~V~~~-~r~~--~~~~~~~-----------~~~~~~-~-----~~~~~~~~Dv~ 87 (270)
T 3ftp_A 29 QVAIVTGASRGIGRAIALELAR-RGAMVIGT-ATTE--AGAEGIG-----------AAFKQA-G-----LEGRGAVLNVN 87 (270)
T ss_dssp CEEEETTCSSHHHHHHHHHHHH-TTCEEEEE-ESSH--HHHHHHH-----------HHHHHH-T-----CCCEEEECCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHH-CCCEEEEE-eCCH--HHHHHHH-----------HHHHhc-C-----CcEEEEEEeCC
Confidence 3688999999999999998875 57877653 4321 1111110 000110 0 122 2456888
Q ss_pred ChHhHHHHHHHHHHc--CCCeEEeCCC
Q 025154 115 DASTVYDNVKQATAF--GMRSVVYVPH 139 (257)
Q Consensus 115 ~p~~~~~~~~~a~~~--Gi~vViGTTG 139 (257)
.++.....+..+.+. ++.+|+-..|
T Consensus 88 d~~~v~~~~~~~~~~~g~iD~lvnnAg 114 (270)
T 3ftp_A 88 DATAVDALVESTLKEFGALNVLVNNAG 114 (270)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 888888777766554 6888886654
No 466
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=90.77 E-value=2 Score=36.07 Aligned_cols=78 Identities=26% Similarity=0.336 Sum_probs=48.0
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCcc-EEEEcC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VvIDFT 114 (257)
.++.|+|++|.+|+.+++.+.+ .+.+++.. ++.. ... +++.++ .... +..|++
T Consensus 6 k~vlVTGas~giG~~ia~~l~~-~G~~V~~~-~r~~--~~~------------------~~~~~~----~~~~~~~~D~~ 59 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAK-EGARLVAC-DIEE--GPL------------------REAAEA----VGAHPVVMDVA 59 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH-TTCEEEEE-ESCH--HHH------------------HHHHHT----TTCEEEECCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHH-CCCEEEEE-eCCH--HHH------------------HHHHHH----cCCEEEEecCC
Confidence 4799999999999999998875 57887654 4321 111 111111 0122 345778
Q ss_pred ChHhHHHHHHHHHHc--CCCeEEeCCC
Q 025154 115 DASTVYDNVKQATAF--GMRSVVYVPH 139 (257)
Q Consensus 115 ~p~~~~~~~~~a~~~--Gi~vViGTTG 139 (257)
.++...+.+..+.+. ++.+|+=..|
T Consensus 60 ~~~~~~~~~~~~~~~~g~id~lvn~Ag 86 (245)
T 1uls_A 60 DPASVERGFAEALAHLGRLDGVVHYAG 86 (245)
T ss_dssp CHHHHHHHHHHHHHHHSSCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 877776666655443 5777776655
No 467
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=90.75 E-value=3 Score=35.53 Aligned_cols=30 Identities=33% Similarity=0.397 Sum_probs=25.2
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGA 66 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~ 66 (257)
.+|.|.|++|.+|+.+++.+.+ .+.+++..
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~-~G~~V~~~ 38 (264)
T 2dtx_A 9 KVVIVTGASMGIGRAIAERFVD-EGSKVIDL 38 (264)
T ss_dssp CEEEEESCSSHHHHHHHHHHHH-TTCEEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHH-CCCEEEEE
Confidence 4799999999999999998875 57777654
No 468
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=90.75 E-value=1.6 Score=36.11 Aligned_cols=79 Identities=15% Similarity=0.186 Sum_probs=48.4
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCcc-EEEEcC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VvIDFT 114 (257)
.+|.|+|++|.+|+.+++.+.+ .+.+++.. ++.. ... +++.+++ .... +..|.+
T Consensus 6 k~vlVtGasggiG~~~a~~l~~-~G~~V~~~-~r~~--~~~------------------~~~~~~~---~~~~~~~~D~~ 60 (234)
T 2ehd_A 6 GAVLITGASRGIGEATARLLHA-KGYRVGLM-ARDE--KRL------------------QALAAEL---EGALPLPGDVR 60 (234)
T ss_dssp CEEEESSTTSHHHHHHHHHHHH-TTCEEEEE-ESCH--HHH------------------HHHHHHS---TTCEEEECCTT
T ss_pred CEEEEECCCcHHHHHHHHHHHH-CCCEEEEE-ECCH--HHH------------------HHHHHHh---hhceEEEecCC
Confidence 4699999999999999999875 57887654 3321 111 1111100 0122 345778
Q ss_pred ChHhHHHHHHHHHHc--CCCeEEeCCC
Q 025154 115 DASTVYDNVKQATAF--GMRSVVYVPH 139 (257)
Q Consensus 115 ~p~~~~~~~~~a~~~--Gi~vViGTTG 139 (257)
.++...+.+..+.+. ++.+|+-..|
T Consensus 61 ~~~~~~~~~~~~~~~~~~id~li~~Ag 87 (234)
T 2ehd_A 61 EEGDWARAVAAMEEAFGELSALVNNAG 87 (234)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 887777666655443 6777776655
No 469
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=90.74 E-value=2.8 Score=36.54 Aligned_cols=83 Identities=17% Similarity=0.207 Sum_probs=52.4
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCcc-EEEEcC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VvIDFT 114 (257)
.+|.|+|++|.+|+.+++.+.+ .+.+++. +++.. ....++. +++-.. ...+. +..|.|
T Consensus 32 k~vlVTGas~gIG~~la~~l~~-~G~~V~~-~~r~~--~~~~~~~--------------~~l~~~---~~~~~~~~~Dv~ 90 (301)
T 3tjr_A 32 RAAVVTGGASGIGLATATEFAR-RGARLVL-SDVDQ--PALEQAV--------------NGLRGQ---GFDAHGVVCDVR 90 (301)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEE-EESCH--HHHHHHH--------------HHHHHT---TCCEEEEECCTT
T ss_pred CEEEEeCCCCHHHHHHHHHHHH-CCCEEEE-EECCH--HHHHHHH--------------HHHHhc---CCceEEEEccCC
Confidence 3699999999999999998875 5788665 44321 1111110 111110 01222 456889
Q ss_pred ChHhHHHHHHHHHHc--CCCeEEeCCC
Q 025154 115 DASTVYDNVKQATAF--GMRSVVYVPH 139 (257)
Q Consensus 115 ~p~~~~~~~~~a~~~--Gi~vViGTTG 139 (257)
.++...+.+..+.+. ++.+|+=..|
T Consensus 91 d~~~v~~~~~~~~~~~g~id~lvnnAg 117 (301)
T 3tjr_A 91 HLDEMVRLADEAFRLLGGVDVVFSNAG 117 (301)
T ss_dssp CHHHHHHHHHHHHHHHSSCSEEEECCC
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence 998888888777654 7888887765
No 470
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=90.70 E-value=0.66 Score=39.83 Aligned_cols=77 Identities=16% Similarity=0.199 Sum_probs=48.8
Q ss_pred eEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCcc-EEEEcCC
Q 025154 37 KVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFTD 115 (257)
Q Consensus 37 kV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VvIDFT~ 115 (257)
+|.|+|++|.+|+.+++.+.+ .+.+++. +++.. ... .+.+.+ .... +..|.+.
T Consensus 29 ~vlVTGas~gIG~aia~~l~~-~G~~V~~-~~r~~--~~~------------------~~~~~~----~~~~~~~~Dv~~ 82 (260)
T 3gem_A 29 PILITGASQRVGLHCALRLLE-HGHRVII-SYRTE--HAS------------------VTELRQ----AGAVALYGDFSC 82 (260)
T ss_dssp CEEESSTTSHHHHHHHHHHHH-TTCCEEE-EESSC--CHH------------------HHHHHH----HTCEEEECCTTS
T ss_pred EEEEECCCCHHHHHHHHHHHH-CCCEEEE-EeCCh--HHH------------------HHHHHh----cCCeEEECCCCC
Confidence 689999999999999998875 4777664 44321 110 011110 1222 3457888
Q ss_pred hHhHHHHHHHHHHc--CCCeEEeCCC
Q 025154 116 ASTVYDNVKQATAF--GMRSVVYVPH 139 (257)
Q Consensus 116 p~~~~~~~~~a~~~--Gi~vViGTTG 139 (257)
++...+.+..+.+. ++.+|+=..|
T Consensus 83 ~~~v~~~~~~~~~~~g~iD~lv~nAg 108 (260)
T 3gem_A 83 ETGIMAFIDLLKTQTSSLRAVVHNAS 108 (260)
T ss_dssp HHHHHHHHHHHHHHCSCCSEEEECCC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 88887777766654 5778775554
No 471
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=90.70 E-value=1.6 Score=36.53 Aligned_cols=33 Identities=21% Similarity=0.163 Sum_probs=27.1
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (257)
+.+|.|+|++|.+|+.+++.+.+..+.+++...
T Consensus 4 ~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~ 36 (276)
T 1wma_A 4 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTA 36 (276)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEe
Confidence 457999999999999999998864678877543
No 472
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=90.67 E-value=0.74 Score=38.75 Aligned_cols=82 Identities=22% Similarity=0.287 Sum_probs=50.5
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCcc-EEEEc
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDF 113 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VvIDF 113 (257)
+.++.|+|++|.+|+.+++.+.+ .+.+++. +++.. ....++ .+.+. ..+. +..|.
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~-~G~~V~~-~~r~~--~~~~~~---------------~~~~~-----~~~~~~~~D~ 58 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVE-RGHQVSM-MGRRY--QRLQQQ---------------ELLLG-----NAVIGIVADL 58 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHH-TTCEEEE-EESCH--HHHHHH---------------HHHHG-----GGEEEEECCT
T ss_pred CCEEEEECCCCHHHHHHHHHHHH-CCCEEEE-EECCH--HHHHHH---------------HHHhc-----CCceEEECCC
Confidence 34799999999999999998875 5788664 44321 111111 01111 1122 45678
Q ss_pred CChHhHHHHHHHHHHc--CCCeEEeCCCC
Q 025154 114 TDASTVYDNVKQATAF--GMRSVVYVPHI 140 (257)
Q Consensus 114 T~p~~~~~~~~~a~~~--Gi~vViGTTG~ 140 (257)
|.++...+.+..+.+. ++.+|+=..|.
T Consensus 59 ~~~~~v~~~~~~~~~~~g~id~lvnnAg~ 87 (235)
T 3l6e_A 59 AHHEDVDVAFAAAVEWGGLPELVLHCAGT 87 (235)
T ss_dssp TSHHHHHHHHHHHHHHHCSCSEEEEECCC
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEECCCC
Confidence 8888887777766553 67777765543
No 473
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=90.67 E-value=0.19 Score=45.17 Aligned_cols=34 Identities=18% Similarity=0.242 Sum_probs=25.4
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEec
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS 69 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~ 69 (257)
++||+|+|+ |.+|..++..+....-+.-+..+|.
T Consensus 6 ~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di 39 (317)
T 3d0o_A 6 GNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDL 39 (317)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 479999997 9999999988776543333446774
No 474
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=90.65 E-value=0.28 Score=43.67 Aligned_cols=31 Identities=19% Similarity=0.215 Sum_probs=24.9
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (257)
-+|.|+|++|.+|+.+++.+. ..+.++++..
T Consensus 157 ~~vlI~Ga~g~iG~~~~~~a~-~~G~~V~~~~ 187 (345)
T 2j3h_A 157 ETVYVSAASGAVGQLVGQLAK-MMGCYVVGSA 187 (345)
T ss_dssp CEEEESSTTSHHHHHHHHHHH-HTTCEEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHH-HCCCEEEEEe
Confidence 479999999999999998766 4577876543
No 475
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=90.64 E-value=3.1 Score=34.78 Aligned_cols=84 Identities=21% Similarity=0.266 Sum_probs=51.7
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCcc-EEEEcC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VvIDFT 114 (257)
.+|.|+|++|.+|+.+++.+.+ .+.+++. +++.. ....++. +++.+. ..... +..|.+
T Consensus 10 k~vlITGas~giG~~~a~~l~~-~G~~V~~-~~r~~--~~~~~~~--------------~~~~~~---~~~~~~~~~D~~ 68 (253)
T 3qiv_A 10 KVGIVTGSGGGIGQAYAEALAR-EGAAVVV-ADINA--EAAEAVA--------------KQIVAD---GGTAISVAVDVS 68 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEE-EESCH--HHHHHHH--------------HHHHHT---TCEEEEEECCTT
T ss_pred CEEEEECCCChHHHHHHHHHHH-CCCEEEE-EcCCH--HHHHHHH--------------HHHHhc---CCcEEEEEccCC
Confidence 4689999999999999999875 5788664 44421 1111111 111110 00111 346788
Q ss_pred ChHhHHHHHHHHHHc--CCCeEEeCCCC
Q 025154 115 DASTVYDNVKQATAF--GMRSVVYVPHI 140 (257)
Q Consensus 115 ~p~~~~~~~~~a~~~--Gi~vViGTTG~ 140 (257)
.++.....+..+.+. ++.+|+=..|.
T Consensus 69 ~~~~~~~~~~~~~~~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 69 DPESAKAMADRTLAEFGGIDYLVNNAAI 96 (253)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 888887777766554 78888876654
No 476
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=90.59 E-value=2.9 Score=35.51 Aligned_cols=82 Identities=11% Similarity=0.144 Sum_probs=51.6
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCcc---EEEE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA---VVID 112 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D---VvID 112 (257)
.++.|+|++|.+|+.+++.+.+ .+.+++...++.. ....++ .+.+.+ ...+ +..|
T Consensus 5 k~vlVTGas~gIG~aia~~l~~-~G~~vv~~~~r~~--~~~~~~---------------~~~~~~----~~~~~~~~~~D 62 (258)
T 3oid_A 5 KCALVTGSSRGVGKAAAIRLAE-NGYNIVINYARSK--KAALET---------------AEEIEK----LGVKVLVVKAN 62 (258)
T ss_dssp CEEEESSCSSHHHHHHHHHHHH-TTCEEEEEESSCH--HHHHHH---------------HHHHHT----TTCCEEEEECC
T ss_pred CEEEEecCCchHHHHHHHHHHH-CCCEEEEEcCCCH--HHHHHH---------------HHHHHh----cCCcEEEEEcC
Confidence 4689999999999999998874 6888876555421 111111 011111 1222 3457
Q ss_pred cCChHhHHHHHHHHHHc--CCCeEEeCCC
Q 025154 113 FTDASTVYDNVKQATAF--GMRSVVYVPH 139 (257)
Q Consensus 113 FT~p~~~~~~~~~a~~~--Gi~vViGTTG 139 (257)
.|.++...+.+..+.+. ++.+|+=..|
T Consensus 63 v~~~~~v~~~~~~~~~~~g~id~lv~nAg 91 (258)
T 3oid_A 63 VGQPAKIKEMFQQIDETFGRLDVFVNNAA 91 (258)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 88888888877776553 6788876554
No 477
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=90.57 E-value=1.7 Score=37.48 Aligned_cols=30 Identities=30% Similarity=0.377 Sum_probs=25.3
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGA 66 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~ 66 (257)
.+|.|+|++|.+|+.+++.+.+ .+.+++..
T Consensus 19 k~vlVTGasggIG~~la~~l~~-~G~~V~~~ 48 (303)
T 1yxm_A 19 QVAIVTGGATGIGKAIVKELLE-LGSNVVIA 48 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHH-CCCEEEEE
Confidence 5799999999999999998875 57886654
No 478
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=90.53 E-value=0.55 Score=40.38 Aligned_cols=86 Identities=14% Similarity=0.098 Sum_probs=48.0
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeee-ecCHH-HHHhccccCCCccEEEEc
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-MSDLT-MVLGSISQSKARAVVIDF 113 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v-~~dl~-~~l~~~~~~~~~DVvIDF 113 (257)
.+|.|+|+ |++|..-++.+.+. +.+++ ++++.. ..++..+.. ..++.. ...++ +.+ ..+|.||-.
T Consensus 32 k~VLVVGg-G~va~~ka~~Ll~~-GA~Vt-Vvap~~-~~~l~~l~~---~~~i~~i~~~~~~~dL------~~adLVIaA 98 (223)
T 3dfz_A 32 RSVLVVGG-GTIATRRIKGFLQE-GAAIT-VVAPTV-SAEINEWEA---KGQLRVKRKKVGEEDL------LNVFFIVVA 98 (223)
T ss_dssp CCEEEECC-SHHHHHHHHHHGGG-CCCEE-EECSSC-CHHHHHHHH---TTSCEEECSCCCGGGS------SSCSEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHHC-CCEEE-EECCCC-CHHHHHHHH---cCCcEEEECCCCHhHh------CCCCEEEEC
Confidence 58999996 99999999988754 55554 455432 223333332 122322 12222 223 368888877
Q ss_pred CChHhHHHHHHHHHHcCCCeE
Q 025154 114 TDASTVYDNVKQATAFGMRSV 134 (257)
Q Consensus 114 T~p~~~~~~~~~a~~~Gi~vV 134 (257)
|.-+.....+..+.+.|+++-
T Consensus 99 T~d~~~N~~I~~~ak~gi~VN 119 (223)
T 3dfz_A 99 TNDQAVNKFVKQHIKNDQLVN 119 (223)
T ss_dssp CCCTHHHHHHHHHSCTTCEEE
T ss_pred CCCHHHHHHHHHHHhCCCEEE
Confidence 754444444444445776543
No 479
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=90.50 E-value=4.3 Score=34.77 Aligned_cols=84 Identities=15% Similarity=0.133 Sum_probs=51.4
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCcc-EEEEcC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VvIDFT 114 (257)
.++.|+|++|.+|+.+++.+.+ .+.+++.. ++.. ....+.. ..+.+... ..+. +..|.|
T Consensus 28 k~~lVTGas~GIG~aia~~l~~-~G~~V~~~-~r~~--~~~~~~~-----------~~~~~~~~-----~~~~~~~~Dv~ 87 (277)
T 4fc7_A 28 KVAFITGGGSGIGFRIAEIFMR-HGCHTVIA-SRSL--PRVLTAA-----------RKLAGATG-----RRCLPLSMDVR 87 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHT-TTCEEEEE-ESCH--HHHHHHH-----------HHHHHHHS-----SCEEEEECCTT
T ss_pred CEEEEeCCCchHHHHHHHHHHH-CCCEEEEE-eCCH--HHHHHHH-----------HHHHHhcC-----CcEEEEEcCCC
Confidence 4689999999999999998874 57877653 4321 1111110 00011111 1222 345888
Q ss_pred ChHhHHHHHHHHHHc--CCCeEEeCCC
Q 025154 115 DASTVYDNVKQATAF--GMRSVVYVPH 139 (257)
Q Consensus 115 ~p~~~~~~~~~a~~~--Gi~vViGTTG 139 (257)
.++...+.+..+.+. ++.+|+=..|
T Consensus 88 ~~~~v~~~~~~~~~~~g~id~lv~nAg 114 (277)
T 4fc7_A 88 APPAVMAAVDQALKEFGRIDILINCAA 114 (277)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence 888888887777655 7888886655
No 480
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=90.49 E-value=1.4 Score=41.80 Aligned_cols=138 Identities=16% Similarity=0.151 Sum_probs=82.3
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecC-----CCCcchhhhhcC--------------CCCCCeeeecCHH
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH-----SVGEDIGMVCDM--------------EQPLEIPVMSDLT 95 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~-----~~g~d~g~~~g~--------------~~~~gv~v~~dl~ 95 (257)
-.||+|-| .|.+|+..++.+. +.+.+++++.|+. ..|-|..++... ..+.+.... +.+
T Consensus 235 Gk~vaVQG-~GnVG~~aa~~L~-e~GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~~~g~~~~-~~~ 311 (450)
T 4fcc_A 235 GMRVSVSG-SGNVAQYAIEKAM-EFGARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAKEFGLVYL-EGQ 311 (450)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHH-HTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHHHHTCEEE-ETC
T ss_pred CCEEEEeC-CChHHHHHHHHHH-hcCCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccccCCcEEe-cCc
Confidence 36899999 5999999999876 5799999988743 234443332100 000122221 224
Q ss_pred HHHhccccCCCccEEEEcCC-hHhHHHHHHHHHHcCCCeEEeCC-C-CCHHHHHHHHHHhhhcCceEEEccCchH---HH
Q 025154 96 MVLGSISQSKARAVVIDFTD-ASTVYDNVKQATAFGMRSVVYVP-H-IQLETVSALSAFCDKASMGCLIAPTLSI---GS 169 (257)
Q Consensus 96 ~~l~~~~~~~~~DVvIDFT~-p~~~~~~~~~a~~~Gi~vViGTT-G-~s~e~~~~L~~~a~~~gipvl~spNfSl---Gv 169 (257)
+++. .++||++=+.. ..-..+++....++|+.+|++-- + .++|..+.| .++ .|+|+|-+.. ||
T Consensus 312 ~i~~-----~~~DI~iPcAl~~~I~~~~a~~L~a~g~k~IaEgAN~p~t~eA~~iL---~~r---GIl~~PD~~aNAGGV 380 (450)
T 4fcc_A 312 QPWS-----VPVDIALPCATQNELDVDAAHQLIANGVKAVAEGANMPTTIEATELF---QQA---GVLFAPGKAANAGGV 380 (450)
T ss_dssp CGGG-----SCCSEEEECSCTTCBCHHHHHHHHHTTCCEEECCSSSCBCHHHHHHH---HHT---TCEEECHHHHTTHHH
T ss_pred cccc-----CCccEEeeccccccccHHHHHHHHhcCceEEecCCCCCCCHHHHHHH---HHC---CCEEEChHHhcCccH
Confidence 4554 48999998764 34446888888889999998743 2 345443333 233 5677776653 55
Q ss_pred HH-HHHHHHHhcCCCCCe
Q 025154 170 IL-LQQAAISASFHYKNV 186 (257)
Q Consensus 170 nl-l~~~a~~l~~~~~Di 186 (257)
.. -.+..+-+..+.|+-
T Consensus 381 i~S~~E~~qn~~~~~w~~ 398 (450)
T 4fcc_A 381 ATSGLEMAQNAARLGWKA 398 (450)
T ss_dssp HHHHHHHHHHHHTCCCCH
T ss_pred hhhHHHHhhhcccCCCCH
Confidence 43 123344444455544
No 481
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=90.49 E-value=0.22 Score=44.18 Aligned_cols=97 Identities=13% Similarity=0.111 Sum_probs=50.8
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeee-e--cCHHHHHhccccCCCccEEEE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV-M--SDLTMVLGSISQSKARAVVID 112 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v-~--~dl~~~l~~~~~~~~~DVvID 112 (257)
-+|.|+|++|.+|...++.+.. .+.++++...+.. ..+...-.|. ...+ + .++.+.+.+...+..+|++||
T Consensus 142 ~~VlV~Ga~g~iG~~~~~~a~~-~Ga~Vi~~~~~~~-~~~~~~~~Ga----~~~~~~~~~~~~~~~~~~~~~~g~Dvvid 215 (325)
T 3jyn_A 142 EIILFHAAAGGVGSLACQWAKA-LGAKLIGTVSSPE-KAAHAKALGA----WETIDYSHEDVAKRVLELTDGKKCPVVYD 215 (325)
T ss_dssp CEEEESSTTSHHHHHHHHHHHH-HTCEEEEEESSHH-HHHHHHHHTC----SEEEETTTSCHHHHHHHHTTTCCEEEEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHH-CCCEEEEEeCCHH-HHHHHHHcCC----CEEEeCCCccHHHHHHHHhCCCCceEEEE
Confidence 4799999889999999987664 5778776553211 0011000110 0111 1 122222221111235788888
Q ss_pred cCChHhHHHHHHHHHHcCCCeEEeCC
Q 025154 113 FTDASTVYDNVKQATAFGMRSVVYVP 138 (257)
Q Consensus 113 FT~p~~~~~~~~~a~~~Gi~vViGTT 138 (257)
++-.+.....+......|.=+++|.+
T Consensus 216 ~~g~~~~~~~~~~l~~~G~iv~~g~~ 241 (325)
T 3jyn_A 216 GVGQDTWLTSLDSVAPRGLVVSFGNA 241 (325)
T ss_dssp SSCGGGHHHHHTTEEEEEEEEECCCT
T ss_pred CCChHHHHHHHHHhcCCCEEEEEecC
Confidence 87655444444444455555556654
No 482
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=90.47 E-value=2.7 Score=35.64 Aligned_cols=84 Identities=17% Similarity=0.233 Sum_probs=51.1
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCcc-EEEEcC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VvIDFT 114 (257)
.+|.|+|++|.+|+.+++.+.+ .+.+++....+.. ....+. .+++.+. ..... +..|++
T Consensus 27 k~vlVTGas~gIG~~la~~l~~-~G~~v~i~~~r~~--~~~~~~--------------~~~l~~~---~~~~~~~~~Dl~ 86 (267)
T 4iiu_A 27 RSVLVTGASKGIGRAIARQLAA-DGFNIGVHYHRDA--AGAQET--------------LNAIVAN---GGNGRLLSFDVA 86 (267)
T ss_dssp CEEEETTTTSHHHHHHHHHHHH-TTCEEEEEESSCH--HHHHHH--------------HHHHHHT---TCCEEEEECCTT
T ss_pred CEEEEECCCChHHHHHHHHHHH-CCCEEEEEeCCch--HHHHHH--------------HHHHHhc---CCceEEEEecCC
Confidence 3699999999999999998875 5788765554321 011110 0111110 01222 345788
Q ss_pred ChHhHHHHHHHHHHc--CCCeEEeCCC
Q 025154 115 DASTVYDNVKQATAF--GMRSVVYVPH 139 (257)
Q Consensus 115 ~p~~~~~~~~~a~~~--Gi~vViGTTG 139 (257)
.++...+.+..+.+. ++.+|+-..|
T Consensus 87 ~~~~~~~~~~~~~~~~g~id~li~nAg 113 (267)
T 4iiu_A 87 NREQCREVLEHEIAQHGAWYGVVSNAG 113 (267)
T ss_dssp CHHHHHHHHHHHHHHHCCCSEEEECCC
T ss_pred CHHHHHHHHHHHHHHhCCccEEEECCC
Confidence 888887777766554 6777776655
No 483
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=90.47 E-value=0.45 Score=41.22 Aligned_cols=102 Identities=21% Similarity=0.218 Sum_probs=50.4
Q ss_pred ccccccccc--CccccccCCCCCCCceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeee
Q 025154 13 HHISQNVKA--KRFISCSTNPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPV 90 (257)
Q Consensus 13 ~~~~~~~~~--~~~~~~~~~~~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v 90 (257)
||-|+-|.+ ++..+.+-.+.. ...+.|+|++|.+|+.+++.+.+ .+.+++. +++.. ....++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~m~~~~-~k~~lVTGas~GIG~aia~~la~-~G~~V~~-~~r~~--~~~~~~~---------- 69 (272)
T 4dyv_A 5 HHHSSGVDLGTENLYFQSMSKTG-KKIAIVTGAGSGVGRAVAVALAG-AGYGVAL-AGRRL--DALQETA---------- 69 (272)
T ss_dssp ------------------------CCEEEETTTTSHHHHHHHHHHHH-TTCEEEE-EESCH--HHHHHHH----------
T ss_pred ccccccccCCcceeehhhhcCCC-CCEEEEeCCCcHHHHHHHHHHHH-CCCEEEE-EECCH--HHHHHHH----------
Confidence 444554432 333333322222 24578899999999999998875 5787664 44321 1111110
Q ss_pred ecCHHHHHhccccCCCcc-EEEEcCChHhHHHHHHHHHHc--CCCeEEeCCC
Q 025154 91 MSDLTMVLGSISQSKARA-VVIDFTDASTVYDNVKQATAF--GMRSVVYVPH 139 (257)
Q Consensus 91 ~~dl~~~l~~~~~~~~~D-VvIDFT~p~~~~~~~~~a~~~--Gi~vViGTTG 139 (257)
+.+. .++. +..|.|.++...+.+..+.+. ++.+|+=..|
T Consensus 70 -----~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg 111 (272)
T 4dyv_A 70 -----AEIG-----DDALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAG 111 (272)
T ss_dssp -----HHHT-----SCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred -----HHhC-----CCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 1111 1222 456888888888877766554 7888876554
No 484
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=90.46 E-value=0.43 Score=42.87 Aligned_cols=31 Identities=32% Similarity=0.417 Sum_probs=24.9
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (257)
-+|.|+|++|.+|..+++.+. ..+.++++..
T Consensus 169 ~~VlV~Gg~g~iG~~~~~~a~-~~Ga~Vi~~~ 199 (353)
T 4dup_A 169 ESVLIHGGTSGIGTTAIQLAR-AFGAEVYATA 199 (353)
T ss_dssp CEEEESSTTSHHHHHHHHHHH-HTTCEEEEEE
T ss_pred CEEEEEcCCCHHHHHHHHHHH-HcCCEEEEEe
Confidence 379999888999999998766 5688876654
No 485
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=90.40 E-value=0.54 Score=44.18 Aligned_cols=61 Identities=20% Similarity=0.107 Sum_probs=42.4
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
-.+|+|+| +|+||+.+++.+. .-++++.+ +|+... .. ..+.....++++++. .+|+|+-..
T Consensus 156 gktvGIIG-lG~IG~~vA~~l~-~~G~~V~~-yd~~~~-~~---------~~~~~~~~sl~ell~------~aDvV~lhv 216 (416)
T 3k5p_A 156 GKTLGIVG-YGNIGSQVGNLAE-SLGMTVRY-YDTSDK-LQ---------YGNVKPAASLDELLK------TSDVVSLHV 216 (416)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHH-HTTCEEEE-ECTTCC-CC---------BTTBEECSSHHHHHH------HCSEEEECC
T ss_pred CCEEEEEe-eCHHHHHHHHHHH-HCCCEEEE-ECCcch-hc---------ccCcEecCCHHHHHh------hCCEEEEeC
Confidence 35899999 6999999999876 45888764 664310 00 112334578999996 699888554
No 486
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=90.38 E-value=0.26 Score=44.01 Aligned_cols=32 Identities=19% Similarity=0.156 Sum_probs=25.6
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEE
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (257)
.-+|.|+|++|.+|+.+++.+. ..+.++++..
T Consensus 167 g~~vlV~Gasg~iG~~~~~~a~-~~G~~Vi~~~ 198 (343)
T 2eih_A 167 GDDVLVMAAGSGVSVAAIQIAK-LFGARVIATA 198 (343)
T ss_dssp TCEEEECSTTSTTHHHHHHHHH-HTTCEEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHH-HCCCEEEEEe
Confidence 3589999999999999998776 4577877643
No 487
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=90.36 E-value=0.97 Score=38.88 Aligned_cols=53 Identities=25% Similarity=0.211 Sum_probs=25.1
Q ss_pred ccccccccccCccccccCCCCCCCceEEEEcCCChHHHHHHHHHHhcCCcEEEE
Q 025154 12 MHHISQNVKAKRFISCSTNPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAG 65 (257)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg 65 (257)
-||-.++-+....++..+-..-...++.|+|++|.+|+.+++.+++ .+.+++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~m~~l~gk~vlVTGas~gIG~aia~~la~-~G~~V~~ 57 (266)
T 3uxy_A 5 HHHSSGVDLGTENLYFQSMQGFEGKVALVTGAAGGIGGAVVTALRA-AGARVAV 57 (266)
T ss_dssp ---------------------CTTCEEEESSTTSHHHHHHHHHHHH-TTCEEEE
T ss_pred ccCCCCCCCCCCCcchhhhhCCCCCEEEEeCCCcHHHHHHHHHHHH-CCCEEEE
Confidence 3455555555444444332222234689999999999999998875 5777664
No 488
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=90.36 E-value=1.9 Score=36.66 Aligned_cols=80 Identities=21% Similarity=0.259 Sum_probs=49.2
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCcc-EEEEcC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VvIDFT 114 (257)
.+|.|.|++|.+|+.+++.+.+ .+.+++.. ++.. ....++. +.+. .... +..|.+
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~-~G~~V~~~-~r~~--~~~~~~~---------------~~~~-----~~~~~~~~D~~ 63 (260)
T 1nff_A 8 KVALVSGGARGMGASHVRAMVA-EGAKVVFG-DILD--EEGKAMA---------------AELA-----DAARYVHLDVT 63 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-TTCEEEEE-ESCH--HHHHHHH---------------HHTG-----GGEEEEECCTT
T ss_pred CEEEEeCCCCHHHHHHHHHHHH-CCCEEEEE-eCCH--HHHHHHH---------------HHhh-----cCceEEEecCC
Confidence 4699999999999999998875 57887653 4321 1111110 1111 0122 345788
Q ss_pred ChHhHHHHHHHHHHc--CCCeEEeCCC
Q 025154 115 DASTVYDNVKQATAF--GMRSVVYVPH 139 (257)
Q Consensus 115 ~p~~~~~~~~~a~~~--Gi~vViGTTG 139 (257)
.++...+.+..+.+. ++.+|+=..|
T Consensus 64 ~~~~v~~~~~~~~~~~g~iD~lv~~Ag 90 (260)
T 1nff_A 64 QPAQWKAAVDTAVTAFGGLHVLVNNAG 90 (260)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 888877777665543 6888876554
No 489
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=90.32 E-value=0.2 Score=44.31 Aligned_cols=87 Identities=15% Similarity=0.187 Sum_probs=51.0
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCee--e-ecC---HHHHHhccccCCCccE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIP--V-MSD---LTMVLGSISQSKARAV 109 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~--v-~~d---l~~~l~~~~~~~~~DV 109 (257)
-+|.|+|++|.+|...++.+. ..+.++++..... .. +++ .++|.. + +.+ +.+.+ ..+|+
T Consensus 154 ~~vlV~Ga~G~vG~~a~q~a~-~~Ga~vi~~~~~~----~~-~~~---~~lGa~~~i~~~~~~~~~~~~------~g~D~ 218 (321)
T 3tqh_A 154 DVVLIHAGAGGVGHLAIQLAK-QKGTTVITTASKR----NH-AFL---KALGAEQCINYHEEDFLLAIS------TPVDA 218 (321)
T ss_dssp CEEEESSTTSHHHHHHHHHHH-HTTCEEEEEECHH----HH-HHH---HHHTCSEEEETTTSCHHHHCC------SCEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHH-HcCCEEEEEeccc----hH-HHH---HHcCCCEEEeCCCcchhhhhc------cCCCE
Confidence 379999988999999998765 5688888765321 11 111 012221 1 222 33333 37999
Q ss_pred EEEcCChHhHHHHHHHHHHcCCCeEEeC
Q 025154 110 VIDFTDASTVYDNVKQATAFGMRSVVYV 137 (257)
Q Consensus 110 vIDFT~p~~~~~~~~~a~~~Gi~vViGT 137 (257)
+||++-.+.....++.....|.=+.+|.
T Consensus 219 v~d~~g~~~~~~~~~~l~~~G~iv~~g~ 246 (321)
T 3tqh_A 219 VIDLVGGDVGIQSIDCLKETGCIVSVPT 246 (321)
T ss_dssp EEESSCHHHHHHHGGGEEEEEEEEECCS
T ss_pred EEECCCcHHHHHHHHhccCCCEEEEeCC
Confidence 9999976666444443344454444543
No 490
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=90.28 E-value=2.5 Score=35.55 Aligned_cols=30 Identities=27% Similarity=0.370 Sum_probs=25.2
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGA 66 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~ 66 (257)
.+|.|.|++|.+|+.+++.+.+ .+.+++..
T Consensus 16 k~vlVTGas~gIG~~ia~~l~~-~G~~V~~~ 45 (247)
T 1uzm_A 16 RSVLVTGGNRGIGLAIAQRLAA-DGHKVAVT 45 (247)
T ss_dssp CEEEETTTTSHHHHHHHHHHHH-TTCEEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHH-CCCEEEEE
Confidence 4799999999999999998875 57887654
No 491
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=90.27 E-value=0.34 Score=43.58 Aligned_cols=95 Identities=13% Similarity=0.163 Sum_probs=51.8
Q ss_pred eEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCee-eec--CH--HHHHhccccCC-CccEE
Q 025154 37 KVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIP-VMS--DL--TMVLGSISQSK-ARAVV 110 (257)
Q Consensus 37 kV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~-v~~--dl--~~~l~~~~~~~-~~DVv 110 (257)
+|.|.|++|.+|...++++. .-+.++++++++.....+..+++ ..+|.. +.+ +. +++. ++.... .+|++
T Consensus 170 ~VlV~Ga~G~vG~~aiqlak-~~Ga~vi~~~~~~~~~~~~~~~~---~~lGa~~vi~~~~~~~~~~~-~~~~~~~~~Dvv 244 (357)
T 1zsy_A 170 SVIQNASNSGVGQAVIQIAA-ALGLRTINVVRDRPDIQKLSDRL---KSLGAEHVITEEELRRPEMK-NFFKDMPQPRLA 244 (357)
T ss_dssp EEEESSTTSHHHHHHHHHHH-HHTCEEEEEECCCSCHHHHHHHH---HHTTCSEEEEHHHHHSGGGG-GTTSSSCCCSEE
T ss_pred EEEEeCCcCHHHHHHHHHHH-HcCCEEEEEecCccchHHHHHHH---HhcCCcEEEecCcchHHHHH-HHHhCCCCceEE
Confidence 79999999999999998765 45888888886531100011111 122321 111 10 1111 111111 48999
Q ss_pred EEcCChHhHHHHHHHHHHcCCCeEEe
Q 025154 111 IDFTDASTVYDNVKQATAFGMRSVVY 136 (257)
Q Consensus 111 IDFT~p~~~~~~~~~a~~~Gi~vViG 136 (257)
||++-.+.....+..+...|.=+.+|
T Consensus 245 id~~g~~~~~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 245 LNCVGGKSSTELLRQLARGGTMVTYG 270 (357)
T ss_dssp EESSCHHHHHHHHTTSCTTCEEEECC
T ss_pred EECCCcHHHHHHHHhhCCCCEEEEEe
Confidence 99987655555444434455555555
No 492
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=90.27 E-value=3.2 Score=35.15 Aligned_cols=84 Identities=14% Similarity=0.148 Sum_probs=50.5
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCcc-EEEEcC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VvIDFT 114 (257)
.+|.|+|++|.+|+.+++.+.+ .+.+++. +++.. ....++. +++.+. ...+. +..|.+
T Consensus 30 k~vlITGas~gIG~~la~~l~~-~G~~V~~-~~r~~--~~~~~~~--------------~~~~~~---~~~~~~~~~D~~ 88 (262)
T 3rkr_A 30 QVAVVTGASRGIGAAIARKLGS-LGARVVL-TARDV--EKLRAVE--------------REIVAA---GGEAESHACDLS 88 (262)
T ss_dssp CEEEESSTTSHHHHHHHHHHHH-TTCEEEE-EESCH--HHHHHHH--------------HHHHHT---TCEEEEEECCTT
T ss_pred CEEEEECCCChHHHHHHHHHHH-CCCEEEE-EECCH--HHHHHHH--------------HHHHHh---CCceeEEEecCC
Confidence 4799999999999999998875 5788664 44321 1111110 111110 01122 346788
Q ss_pred ChHhHHHHHHHHHHc--CCCeEEeCCCC
Q 025154 115 DASTVYDNVKQATAF--GMRSVVYVPHI 140 (257)
Q Consensus 115 ~p~~~~~~~~~a~~~--Gi~vViGTTG~ 140 (257)
.++.....+..+.+. ++.+|+=..|.
T Consensus 89 ~~~~v~~~~~~~~~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 89 HSDAIAAFATGVLAAHGRCDVLVNNAGV 116 (262)
T ss_dssp CHHHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCCc
Confidence 888887777665443 58888766654
No 493
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=90.25 E-value=1.9 Score=36.32 Aligned_cols=84 Identities=21% Similarity=0.239 Sum_probs=48.4
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCcc-EEEEcC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VvIDFT 114 (257)
.+|.|+|++|.+|+.+++.+.+ .+.+++....... ....++. +++-.. ..+.. +..|++
T Consensus 22 k~vlItGasggiG~~la~~l~~-~G~~v~~~~r~~~--~~~~~~~--------------~~l~~~---~~~~~~~~~D~~ 81 (274)
T 1ja9_A 22 KVALTTGAGRGIGRGIAIELGR-RGASVVVNYGSSS--KAAEEVV--------------AELKKL---GAQGVAIQADIS 81 (274)
T ss_dssp CEEEETTTTSHHHHHHHHHHHH-TTCEEEEEESSCH--HHHHHHH--------------HHHHHT---TCCEEEEECCTT
T ss_pred CEEEEeCCCchHHHHHHHHHHH-CCCEEEEEcCCch--HHHHHHH--------------HHHHhc---CCcEEEEEecCC
Confidence 5799999999999999999875 4788776432120 1111110 011100 01122 345778
Q ss_pred ChHhHHHHHHHHHHc--CCCeEEeCCC
Q 025154 115 DASTVYDNVKQATAF--GMRSVVYVPH 139 (257)
Q Consensus 115 ~p~~~~~~~~~a~~~--Gi~vViGTTG 139 (257)
.++...+.+..+.+. ++.+|+-..|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~d~vi~~Ag 108 (274)
T 1ja9_A 82 KPSEVVALFDKAVSHFGGLDFVMSNSG 108 (274)
T ss_dssp SHHHHHHHHHHHHHHHSCEEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 887777666655443 6777765544
No 494
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=90.23 E-value=0.56 Score=42.32 Aligned_cols=94 Identities=20% Similarity=0.176 Sum_probs=50.5
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCe--ee-e--cCHHHHHhccccCCCccEE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEI--PV-M--SDLTMVLGSISQSKARAVV 110 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv--~v-~--~dl~~~l~~~~~~~~~DVv 110 (257)
-+|.|+|++|.+|..+++.+.. .+.++++...+. .....+. .+|. .+ + .++.+.+.+.. ...+|++
T Consensus 165 ~~VlV~Ga~G~iG~~~~q~a~~-~Ga~Vi~~~~~~---~~~~~~~----~~Ga~~~~~~~~~~~~~~~~~~~-~~g~D~v 235 (362)
T 2c0c_A 165 KKVLVTAAAGGTGQFAMQLSKK-AKCHVIGTCSSD---EKSAFLK----SLGCDRPINYKTEPVGTVLKQEY-PEGVDVV 235 (362)
T ss_dssp CEEEETTTTBTTHHHHHHHHHH-TTCEEEEEESSH---HHHHHHH----HTTCSEEEETTTSCHHHHHHHHC-TTCEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHh-CCCEEEEEECCH---HHHHHHH----HcCCcEEEecCChhHHHHHHHhc-CCCCCEE
Confidence 3799999889999999987664 578876544221 0111111 1121 11 1 23333332110 1358999
Q ss_pred EEcCChHhHHHHHHHHHHcCCCeEEeCC
Q 025154 111 IDFTDASTVYDNVKQATAFGMRSVVYVP 138 (257)
Q Consensus 111 IDFT~p~~~~~~~~~a~~~Gi~vViGTT 138 (257)
||++........+..+...|.=+.+|..
T Consensus 236 id~~g~~~~~~~~~~l~~~G~iv~~g~~ 263 (362)
T 2c0c_A 236 YESVGGAMFDLAVDALATKGRLIVIGFI 263 (362)
T ss_dssp EECSCTHHHHHHHHHEEEEEEEEECCCG
T ss_pred EECCCHHHHHHHHHHHhcCCEEEEEeCC
Confidence 9988664444444444445554555543
No 495
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=90.21 E-value=0.84 Score=39.27 Aligned_cols=81 Identities=17% Similarity=0.225 Sum_probs=49.4
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCcc-EEEEcC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VvIDFT 114 (257)
.++.|+|++|.+|+.+++.+.+ .+..++. +++.. .... ++.+++ ...+. +..|.|
T Consensus 28 k~vlVTGas~gIG~aia~~la~-~G~~V~~-~~r~~--~~~~------------------~~~~~~--~~~~~~~~~Dv~ 83 (266)
T 3grp_A 28 RKALVTGATGGIGEAIARCFHA-QGAIVGL-HGTRE--DKLK------------------EIAADL--GKDVFVFSANLS 83 (266)
T ss_dssp CEEEESSTTSHHHHHHHHHHHH-TTCEEEE-EESCH--HHHH------------------HHHHHH--CSSEEEEECCTT
T ss_pred CEEEEeCCCcHHHHHHHHHHHH-CCCEEEE-EeCCH--HHHH------------------HHHHHh--CCceEEEEeecC
Confidence 3689999999999999998875 5777654 34321 1111 111110 01222 335778
Q ss_pred ChHhHHHHHHHHHHc--CCCeEEeCCCC
Q 025154 115 DASTVYDNVKQATAF--GMRSVVYVPHI 140 (257)
Q Consensus 115 ~p~~~~~~~~~a~~~--Gi~vViGTTG~ 140 (257)
.++.....+..+.+. ++.+|+=..|.
T Consensus 84 d~~~v~~~~~~~~~~~g~iD~lvnnAg~ 111 (266)
T 3grp_A 84 DRKSIKQLAEVAEREMEGIDILVNNAGI 111 (266)
T ss_dssp SHHHHHHHHHHHHHHHTSCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 888777777666554 67888766553
No 496
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=90.20 E-value=2.8 Score=35.72 Aligned_cols=84 Identities=20% Similarity=0.235 Sum_probs=51.3
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCcc-EEEEcC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VvIDFT 114 (257)
.+|.|+|++|.+|+.+++.+.+ .+.+++...... .+..+ .+.+.+.+. ...+. +..|++
T Consensus 30 k~vlITGas~gIG~~la~~l~~-~G~~V~~~~r~~---~~~~~--------------~~~~~~~~~--~~~~~~~~~D~~ 89 (271)
T 4iin_A 30 KNVLITGASKGIGAEIAKTLAS-MGLKVWINYRSN---AEVAD--------------ALKNELEEK--GYKAAVIKFDAA 89 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHH-TTCEEEEEESSC---HHHHH--------------HHHHHHHHT--TCCEEEEECCTT
T ss_pred CEEEEECCCcHHHHHHHHHHHH-CCCEEEEEeCCC---HHHHH--------------HHHHHHHhc--CCceEEEECCCC
Confidence 4799999999999999999875 578877544322 11100 011111110 01222 345788
Q ss_pred ChHhHHHHHHHHHHc--CCCeEEeCCC
Q 025154 115 DASTVYDNVKQATAF--GMRSVVYVPH 139 (257)
Q Consensus 115 ~p~~~~~~~~~a~~~--Gi~vViGTTG 139 (257)
.++...+.+..+.+. ++.+|+=..|
T Consensus 90 ~~~~v~~~~~~~~~~~g~id~li~nAg 116 (271)
T 4iin_A 90 SESDFIEAIQTIVQSDGGLSYLVNNAG 116 (271)
T ss_dssp CHHHHHHHHHHHHHHHSSCCEEEECCC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 888888777766554 7888876655
No 497
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=90.17 E-value=0.58 Score=42.27 Aligned_cols=61 Identities=23% Similarity=0.266 Sum_probs=41.8
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
..+|+|+| +|+||+.+++.+. .-++++. ++|+... .... .. + .+.++++++. .+|+|+...
T Consensus 146 g~~vgIiG-~G~IG~~~A~~l~-~~G~~V~-~~d~~~~-~~~~-------~~-~-~~~~l~ell~------~aDvV~~~~ 206 (331)
T 1xdw_A 146 NCTVGVVG-LGRIGRVAAQIFH-GMGATVI-GEDVFEI-KGIE-------DY-C-TQVSLDEVLE------KSDIITIHA 206 (331)
T ss_dssp GSEEEEEC-CSHHHHHHHHHHH-HTTCEEE-EECSSCC-CSCT-------TT-C-EECCHHHHHH------HCSEEEECC
T ss_pred CCEEEEEC-cCHHHHHHHHHHH-HCCCEEE-EECCCcc-HHHH-------hc-c-ccCCHHHHHh------hCCEEEEec
Confidence 46899999 5999999999876 4688865 4665321 1110 11 2 2458999886 689988754
No 498
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=90.14 E-value=0.85 Score=40.97 Aligned_cols=31 Identities=29% Similarity=0.463 Sum_probs=25.1
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEE
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAI 67 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~v 67 (257)
-+|.|+|++|.+|+.+++.+. ..+.++++..
T Consensus 172 ~~vlV~GasggiG~~~~~~a~-~~Ga~Vi~~~ 202 (351)
T 1yb5_A 172 ESVLVHGASGGVGLAACQIAR-AYGLKILGTA 202 (351)
T ss_dssp CEEEEETCSSHHHHHHHHHHH-HTTCEEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHH-HCCCEEEEEe
Confidence 379999999999999998776 4678876543
No 499
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=90.09 E-value=0.52 Score=43.08 Aligned_cols=61 Identities=26% Similarity=0.261 Sum_probs=41.8
Q ss_pred CceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCccEEEEcC
Q 025154 35 NIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFT 114 (257)
Q Consensus 35 ~ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~DVvIDFT 114 (257)
-.+|+|+| +|+||+.+++.+. .-++++.+ +|+.. .. .. ..++ -+.++++++. .+|+|+-..
T Consensus 148 gktvgIiG-lG~IG~~vA~~l~-~~G~~V~~-~d~~~--~~--~~-----~~~~-~~~~l~ell~------~aDvV~l~~ 208 (343)
T 2yq5_A 148 NLTVGLIG-VGHIGSAVAEIFS-AMGAKVIA-YDVAY--NP--EF-----EPFL-TYTDFDTVLK------EADIVSLHT 208 (343)
T ss_dssp GSEEEEEC-CSHHHHHHHHHHH-HTTCEEEE-ECSSC--CG--GG-----TTTC-EECCHHHHHH------HCSEEEECC
T ss_pred CCeEEEEe-cCHHHHHHHHHHh-hCCCEEEE-ECCCh--hh--hh-----hccc-cccCHHHHHh------cCCEEEEcC
Confidence 35899999 6999999999876 45888764 66532 11 11 1122 2348999986 699988654
No 500
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=90.05 E-value=1.7 Score=36.22 Aligned_cols=82 Identities=17% Similarity=0.119 Sum_probs=48.4
Q ss_pred ceEEEEcCCChHHHHHHHHHHhcCCcEEEEEEecCCCCcchhhhhcCCCCCCeeeecCHHHHHhccccCCCcc-EEEEcC
Q 025154 36 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARA-VVIDFT 114 (257)
Q Consensus 36 ikV~V~Ga~GrMG~~i~~~i~~~~~~eLvg~vd~~~~g~d~g~~~g~~~~~gv~v~~dl~~~l~~~~~~~~~D-VvIDFT 114 (257)
.+|.|+|++|.+|+.+++.+.+ .+.+++. +++.. ....++. +.+.. ...+. +..|++
T Consensus 7 k~vlVtGasggiG~~~a~~l~~-~G~~V~~-~~r~~--~~~~~~~---------------~~~~~---~~~~~~~~~D~~ 64 (251)
T 1zk4_A 7 KVAIITGGTLGIGLAIATKFVE-EGAKVMI-TGRHS--DVGEKAA---------------KSVGT---PDQIQFFQHDSS 64 (251)
T ss_dssp CEEEETTTTSHHHHHHHHHHHH-TTCEEEE-EESCH--HHHHHHH---------------HHHCC---TTTEEEEECCTT
T ss_pred cEEEEeCCCChHHHHHHHHHHH-CCCEEEE-EeCCH--HHHHHHH---------------HHhhc---cCceEEEECCCC
Confidence 4799999999999999999875 5788765 34321 0111100 11110 00222 345788
Q ss_pred ChHhHHHHHHHHHHc--CCCeEEeCCC
Q 025154 115 DASTVYDNVKQATAF--GMRSVVYVPH 139 (257)
Q Consensus 115 ~p~~~~~~~~~a~~~--Gi~vViGTTG 139 (257)
.++...+.+..+.+. ++.+|+-..|
T Consensus 65 ~~~~~~~~~~~~~~~~~~id~li~~Ag 91 (251)
T 1zk4_A 65 DEDGWTKLFDATEKAFGPVSTLVNNAG 91 (251)
T ss_dssp CHHHHHHHHHHHHHHHSSCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence 887777666655432 5777776554
Done!