BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>025155
MASASSLKPISYSLNLPNSRSSSSETQRLLGFKSSFSSHHRNLSLSTTHQDVSRRSSKNN
VTTKAFFFNKPSSQPDSSRPANNKVQELFVYEINERDRNSPAILKLSQKPEHLTIGDLVP
FTNKLYTGDLQKRIGITAGLCVLIKHEPEKKGDRFEAIYSFYFGDYGHISVQGAYLTYED
TYLAVTGGSGIFEGVYGQVKLHQIVFPYKLFYTFYLKGVADLPQELLVKPVEPSPTVEAA
PAAKATEPHAAISNFTN

High Scoring Gene Products

Symbol, full name Information P value
AOC3
allene oxide cyclase 3
protein from Arabidopsis thaliana 2.9e-71
AOC4
allene oxide cyclase 4
protein from Arabidopsis thaliana 7.0e-70
AOC2
allene oxide cyclase 2
protein from Arabidopsis thaliana 4.8e-62
AOC1
allene oxide cyclase 1
protein from Arabidopsis thaliana 1.0e-61

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  025155
        (257 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2085974 - symbol:AOC3 "allene oxide cyclase 3"...   721  2.9e-71   1
TAIR|locus:2205349 - symbol:AOC4 "allene oxide cyclase 4"...   708  7.0e-70   1
TAIR|locus:2086009 - symbol:AOC2 "allene oxide cyclase 2"...   634  4.8e-62   1
TAIR|locus:2085999 - symbol:AOC1 "allene oxide cyclase 1"...   631  1.0e-61   1


>TAIR|locus:2085974 [details] [associations]
            symbol:AOC3 "allene oxide cyclase 3" species:3702
            "Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM]
            [GO:0016853 "isomerase activity" evidence=IEA] [GO:0009695
            "jasmonic acid biosynthetic process" evidence=RCA;TAS] [GO:0046423
            "allene-oxide cyclase activity" evidence=ISS] [GO:0005886 "plasma
            membrane" evidence=IDA] [GO:0005774 "vacuolar membrane"
            evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0009651
            "response to salt stress" evidence=IEP] [GO:0009620 "response to
            fungus" evidence=IEP;RCA] [GO:0006612 "protein targeting to
            membrane" evidence=RCA] [GO:0009611 "response to wounding"
            evidence=RCA] [GO:0009723 "response to ethylene stimulus"
            evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
            pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
            stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
            signaling pathway" evidence=RCA] [GO:0010363 "regulation of
            plant-type hypersensitive response" evidence=RCA] [GO:0035556
            "intracellular signal transduction" evidence=RCA] [GO:0043069
            "negative regulation of programmed cell death" evidence=RCA]
            [GO:0050832 "defense response to fungus" evidence=RCA] [GO:0052542
            "defense response by callose deposition" evidence=RCA]
            InterPro:IPR009410 Pfam:PF06351 ProDom:PD329160 GO:GO:0005886
            GO:GO:0005774 GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR
            EMBL:AB028607 GO:GO:0009695 GO:GO:0009651 GO:GO:0009620
            eggNOG:NOG246500 HOGENOM:HOG000240167 KO:K10525
            ProtClustDB:PLN02343 GO:GO:0046423 EMBL:AJ308485 EMBL:AY087359
            IPI:IPI00526976 RefSeq:NP_566777.1 UniGene:At.27910
            ProteinModelPortal:Q9LS01 SMR:Q9LS01 STRING:Q9LS01 PaxDb:Q9LS01
            PRIDE:Q9LS01 EnsemblPlants:AT3G25780.1 GeneID:822169
            KEGG:ath:AT3G25780 GeneFarm:2627 TAIR:At3g25780 InParanoid:Q9LS01
            OMA:TYEESYL PhylomeDB:Q9LS01 Genevestigator:Q9LS01
            GermOnline:AT3G25780 Uniprot:Q9LS01
        Length = 258

 Score = 721 (258.9 bits), Expect = 2.9e-71, P = 2.9e-71
 Identities = 154/261 (59%), Positives = 179/261 (68%)

Query:     2 ASASSLKPIXXXXXXXXXXXXXXETQRLLGFKSSFSSHHRNLSLSTTHQDVSRRS----S 57
             ++A SL+ I                  LLGF  SF    +NL +S+   D S RS    S
Sbjct:     5 SAAMSLESISMTTLNNLSRNHQSHRSSLLGFSRSF----QNLGISSNGPDFSSRSRSTTS 60

Query:    58 KNNVTTKAFFFNKPSSQPDSSRPANNKVQELFVYEINERDRNSPAILKLSQKPEHLTIGD 117
             KN   T+AFF+N    + ++SRP+  K+QEL VYE+NE DRNSPA+LKL +KP  L +GD
Sbjct:    61 KNLNVTRAFFWNW-GKKTENSRPS--KIQELNVYELNEGDRNSPAVLKLGKKPTELCLGD 117

Query:   118 LVPFTNKLYTGDLQKRIGITAGLCVLIKHEPEKKGDRFEAIYSFYFGDYGHISVQGAYLT 177
             LVPFTNKLYTGDL+KR+GITAGLCVLI+H PEK GDRFEA YSFYFGDYGH+SVQG YLT
Sbjct:   118 LVPFTNKLYTGDLKKRVGITAGLCVLIQHVPEKSGDRFEASYSFYFGDYGHLSVQGQYLT 177

Query:   178 YEDTYLAVTGGSGIFEGVYGQVKLHQIVFPYKLFYTFYLKGVA-DLPQELLVKPVEPSPT 236
             YEDT+LAVTGGSGIFEG YGQVKL Q+V+P KLFYTFYLKG+A DLP EL    V PS  
Sbjct:   178 YEDTFLAVTGGSGIFEGAYGQVKLRQLVYPTKLFYTFYLKGLANDLPLELTGTAVTPSKD 237

Query:   237 VXXXXXXXXXXXXXXISNFTN 257
             V              ISNFTN
Sbjct:   238 VKPAPEAKAMEPSGVISNFTN 258


>TAIR|locus:2205349 [details] [associations]
            symbol:AOC4 "allene oxide cyclase 4" species:3702
            "Arabidopsis thaliana" [GO:0009507 "chloroplast"
            evidence=ISM;IEA;IDA] [GO:0009695 "jasmonic acid biosynthetic
            process" evidence=TAS] [GO:0016853 "isomerase activity"
            evidence=IEA] [GO:0046423 "allene-oxide cyclase activity"
            evidence=ISS] [GO:0005886 "plasma membrane" evidence=IDA]
            InterPro:IPR009410 Pfam:PF06351 ProDom:PD329160 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009507 EMBL:AC011810
            GO:GO:0009695 eggNOG:NOG246500 HOGENOM:HOG000240167 KO:K10525
            ProtClustDB:PLN02343 GO:GO:0046423 EMBL:AJ308486 EMBL:AY141993
            EMBL:AY057636 IPI:IPI00548611 PIR:D86267 RefSeq:NP_172786.1
            UniGene:At.16133 ProteinModelPortal:Q93ZC5 SMR:Q93ZC5 STRING:Q93ZC5
            PaxDb:Q93ZC5 PRIDE:Q93ZC5 DNASU:837888 EnsemblPlants:AT1G13280.1
            GeneID:837888 KEGG:ath:AT1G13280 GeneFarm:2625 TAIR:At1g13280
            InParanoid:Q93ZC5 OMA:FFRTICS PhylomeDB:Q93ZC5
            Genevestigator:Q93ZC5 GermOnline:AT1G13280 Uniprot:Q93ZC5
        Length = 254

 Score = 708 (254.3 bits), Expect = 7.0e-70, P = 7.0e-70
 Identities = 148/230 (64%), Positives = 165/230 (71%)

Query:    30 LGFKSSFSSHHRNLSLSTTHQDVSRRSSKNNVTTKAFFFNK-PSSQPDSSRPANNKVQEL 88
             LGF  SF  H  N  +S+    +S R+     +T  FF     SS  D SRP   K+QEL
Sbjct:    31 LGFSRSF--H--NQRISSNSPGLSTRARSTTSSTGGFFRTICSSSSNDYSRPT--KIQEL 84

Query:    89 FVYEINERDRNSPAILKLSQKPEHLTIGDLVPFTNKLYTGDLQKRIGITAGLCVLIKHEP 148
              VYE NE DRNSPA+LKL +KP+ L +GDLVPFTNKLYTGDL KRIGITAGLCVLI+H P
Sbjct:    85 NVYEFNEGDRNSPAVLKLGKKPDQLCLGDLVPFTNKLYTGDLTKRIGITAGLCVLIQHVP 144

Query:   149 EKKGDRFEAIYSFYFGDYGHISVQGAYLTYEDTYLAVTGGSGIFEGVYGQVKLHQIVFPY 208
             EKKGDRFEA YSFYFGDYGHISVQG YLTYEDT+LA+TGGSG+FEG YGQVKL Q+V+P 
Sbjct:   145 EKKGDRFEASYSFYFGDYGHISVQGPYLTYEDTFLAITGGSGVFEGAYGQVKLRQLVYPT 204

Query:   209 KLFYTFYLKGVA-DLPQELLVKPVEPSPTVXXXXXXXXXXXXXXISNFTN 257
             KLFYTFYLKGVA DLP EL  K VEPS  V              I+NFTN
Sbjct:   205 KLFYTFYLKGVAADLPVELTGKHVEPSKEVKPAAEAQATQPGATIANFTN 254


>TAIR|locus:2086009 [details] [associations]
            symbol:AOC2 "allene oxide cyclase 2" species:3702
            "Arabidopsis thaliana" [GO:0009507 "chloroplast"
            evidence=ISM;IEA;IDA] [GO:0016853 "isomerase activity"
            evidence=IEA] [GO:0009695 "jasmonic acid biosynthetic process"
            evidence=TAS] [GO:0046423 "allene-oxide cyclase activity"
            evidence=ISS;IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
            [GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
            [GO:0009409 "response to cold" evidence=IEP] [GO:0010319 "stromule"
            evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
            InterPro:IPR009410 Pfam:PF06351 ProDom:PD329160 GO:GO:0009570
            EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AB028607 GO:GO:0009695
            GO:GO:0009409 GO:GO:0009941 GO:GO:0009535 HOGENOM:HOG000240167
            KO:K10525 ProtClustDB:PLN02343 GO:GO:0046423 EMBL:AJ308484
            EMBL:AY054131 EMBL:AF380630 IPI:IPI00520951 RefSeq:NP_566776.1
            UniGene:At.6411 PDB:1Z8K PDB:2BRJ PDB:2DIO PDB:2GIN PDB:2Q4I
            PDBsum:1Z8K PDBsum:2BRJ PDBsum:2DIO PDBsum:2GIN PDBsum:2Q4I
            ProteinModelPortal:Q9LS02 SMR:Q9LS02 STRING:Q9LS02 PaxDb:Q9LS02
            PRIDE:Q9LS02 DNASU:822168 EnsemblPlants:AT3G25770.1 GeneID:822168
            KEGG:ath:AT3G25770 GeneFarm:2623 TAIR:At3g25770 eggNOG:NOG312289
            InParanoid:Q9LS02 OMA:NIENPRP PhylomeDB:Q9LS02
            BioCyc:MetaCyc:AT3G25770-MONOMER EvolutionaryTrace:Q9LS02
            Genevestigator:Q9LS02 GermOnline:AT3G25770 GO:GO:0010319
            Uniprot:Q9LS02
        Length = 253

 Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
 Identities = 143/261 (54%), Positives = 170/261 (65%)

Query:     2 ASASSLKPIXXXXXXXXXXXXXXETQRLLGFKSSFSSHHRNLSLSTTHQDVSRRSS---K 58
             +SA SL+ I                  LLG   SF    +NL +S+   D S  SS   K
Sbjct:     3 SSAVSLQSISMTTLNNLSCNQQFHRSSLLGSSKSF----QNLGISSNGSDFSYPSSFTAK 58

Query:    59 NNVT-TKAFFFNKPSSQPDSSRPANNKVQELFVYEINERDRNSPAILKLSQKPEHLTIGD 117
              N+T ++A   N     P   RP+  KVQEL VYEINE DR+SP ILK +       +GD
Sbjct:    59 KNLTASRALSQNGNIENP---RPS--KVQELSVYEINELDRHSPKILK-NAFSLMFGLGD 112

Query:   118 LVPFTNKLYTGDLQKRIGITAGLCVLIKHEPEKKGDRFEAIYSFYFGDYGHISVQGAYLT 177
             LVPFTNKLYTGDL+KR+GITAGLCV+I+H PEKKG+RFEA YSFYFGDYGH+SVQG YLT
Sbjct:   113 LVPFTNKLYTGDLKKRVGITAGLCVVIEHVPEKKGERFEATYSFYFGDYGHLSVQGPYLT 172

Query:   178 YEDTYLAVTGGSGIFEGVYGQVKLHQIVFPYKLFYTFYLKGVA-DLPQELLVKPVEPSPT 236
             YED++LA+TGG+GIFEG YGQVKL Q+V+P KLFYTFYLKG+A DLP EL   PV PS  
Sbjct:   173 YEDSFLAITGGAGIFEGAYGQVKLQQLVYPTKLFYTFYLKGLANDLPLELTGTPVPPSKD 232

Query:   237 VXXXXXXXXXXXXXXISNFTN 257
             +              ISN+TN
Sbjct:   233 IEPAPEAKALEPSGVISNYTN 253


>TAIR|locus:2085999 [details] [associations]
            symbol:AOC1 "allene oxide cyclase 1" species:3702
            "Arabidopsis thaliana" [GO:0009507 "chloroplast"
            evidence=ISM;IEA;IDA] [GO:0016853 "isomerase activity"
            evidence=IEA] [GO:0009695 "jasmonic acid biosynthetic process"
            evidence=TAS] [GO:0046423 "allene-oxide cyclase activity"
            evidence=ISS] [GO:0009941 "chloroplast envelope" evidence=IDA]
            [GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
            [GO:0009269 "response to desiccation" evidence=IEP]
            InterPro:IPR009410 Pfam:PF06351 ProDom:PD329160 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0006950 EMBL:AB028607 GO:GO:0009695
            GO:GO:0009941 GO:GO:0009535 EMBL:AJ308483 EMBL:AK175392
            EMBL:AK176777 EMBL:AB039931 IPI:IPI00525444 RefSeq:NP_189204.1
            UniGene:At.26518 PDB:1ZVC PDBsum:1ZVC ProteinModelPortal:Q9LS03
            SMR:Q9LS03 STRING:Q9LS03 PaxDb:Q9LS03 PRIDE:Q9LS03 DNASU:822167
            EnsemblPlants:AT3G25760.1 GeneID:822167 KEGG:ath:AT3G25760
            GeneFarm:2276 TAIR:At3g25760 eggNOG:NOG246500 HOGENOM:HOG000240167
            InParanoid:Q9LS03 KO:K10525 OMA:GNTENPR PhylomeDB:Q9LS03
            ProtClustDB:PLN02343 EvolutionaryTrace:Q9LS03 Genevestigator:Q9LS03
            GermOnline:AT3G25760 GO:GO:0046423 Uniprot:Q9LS03
        Length = 254

 Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
 Identities = 141/263 (53%), Positives = 173/263 (65%)

Query:     1 MASAS-SLKPIXXXXXXXXXXXXXXETQRLLGFKSSFSSHHRNLSLSTTHQDVSRRSS-- 57
             MAS++ SL+ I                  LLGF  SF    +N  +S+     S  +S  
Sbjct:     1 MASSTISLQSISMTTLNNLSYSKQFHRSSLLGFSKSF----QNFGISSNGPGSSSPTSFT 56

Query:    58 -KNNVT-TKAFFFNKPSSQPDSSRPANNKVQELFVYEINERDRNSPAILKLSQKPEHLTI 115
              K  +T T+A   N  +++  + RP+  KVQEL VYEIN+ DR+SP ILK +       +
Sbjct:    57 PKKKLTPTRALSQNLGNTE--NPRPS--KVQELSVYEINDLDRHSPKILK-NAFSFRFGL 111

Query:   116 GDLVPFTNKLYTGDLQKRIGITAGLCVLIKHEPEKKGDRFEAIYSFYFGDYGHISVQGAY 175
             GDLVPFTNKLYTGDL+KR+GITAGLCV+I+H PEK GDRFEA YSFYFGDYGH+SVQG Y
Sbjct:   112 GDLVPFTNKLYTGDLKKRVGITAGLCVVIEHVPEKNGDRFEATYSFYFGDYGHLSVQGPY 171

Query:   176 LTYEDTYLAVTGGSGIFEGVYGQVKLHQIVFPYKLFYTFYLKGVA-DLPQELLVKPVEPS 234
             LTYED++LA+TGG+GIFEG YGQVKL Q+V+P KLFYTFYLKG+A DLP EL+  PV PS
Sbjct:   172 LTYEDSFLAITGGAGIFEGAYGQVKLQQLVYPTKLFYTFYLKGLANDLPLELIGTPVPPS 231

Query:   235 PTVXXXXXXXXXXXXXXISNFTN 257
               V              +SNFTN
Sbjct:   232 KDVEPAPEAKALKPSGVVSNFTN 254


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.135   0.389    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      257       229   0.00082  113 3  11 22  0.42    33
                                                     32  0.42    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  559 (59 KB)
  Total size of DFA:  160 KB (2096 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.18u 0.10s 21.28t   Elapsed:  00:00:01
  Total cpu time:  21.18u 0.10s 21.28t   Elapsed:  00:00:01
  Start:  Thu May  9 18:25:41 2013   End:  Thu May  9 18:25:42 2013

Back to top