Query 025159
Match_columns 257
No_of_seqs 117 out of 1314
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 04:52:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025159.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025159hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zgd_A Chalcone reductase; pol 100.0 5.6E-57 1.9E-61 394.7 22.0 248 7-257 1-250 (312)
2 3h7u_A Aldo-keto reductase; st 100.0 1.6E-56 5.6E-61 395.1 22.6 247 3-257 17-263 (335)
3 3ln3_A Dihydrodiol dehydrogena 100.0 1E-55 3.6E-60 388.7 25.1 244 11-257 5-258 (324)
4 3f7j_A YVGN protein; aldo-keto 100.0 9.2E-56 3.1E-60 380.7 22.7 219 7-257 1-219 (276)
5 3o0k_A Aldo/keto reductase; ss 100.0 4.5E-56 1.6E-60 383.5 20.1 222 4-257 19-240 (283)
6 1afs_A 3-alpha-HSD, 3-alpha-hy 100.0 2.4E-55 8.2E-60 386.1 23.8 244 11-257 4-257 (323)
7 1s1p_A Aldo-keto reductase fam 100.0 6.9E-55 2.3E-59 384.4 24.8 243 12-257 5-257 (331)
8 3buv_A 3-OXO-5-beta-steroid 4- 100.0 1.1E-54 3.6E-59 382.5 25.0 245 10-257 5-260 (326)
9 3b3e_A YVGN protein; aldo-keto 100.0 4.6E-55 1.6E-59 381.5 22.0 220 6-257 34-253 (310)
10 4f40_A Prostaglandin F2-alpha 100.0 4E-55 1.4E-59 378.9 21.4 230 4-257 2-231 (288)
11 1hw6_A 2,5-diketo-D-gluconic a 100.0 8.4E-55 2.9E-59 375.0 22.1 217 12-257 3-219 (278)
12 2wzm_A Aldo-keto reductase; ox 100.0 5.4E-55 1.9E-59 376.9 20.4 217 10-257 9-225 (283)
13 1vbj_A Prostaglandin F synthas 100.0 7E-55 2.4E-59 375.9 20.9 217 9-257 6-222 (281)
14 1mi3_A Xylose reductase, XR; a 100.0 1.8E-54 6E-59 380.5 23.8 242 10-257 3-261 (322)
15 3o3r_A Aldo-keto reductase fam 100.0 3.7E-54 1.3E-58 377.5 25.3 240 12-257 2-250 (316)
16 1qwk_A Aldose reductase, aldo- 100.0 1.2E-54 4.2E-59 380.7 21.4 233 12-257 5-250 (317)
17 1us0_A Aldose reductase; oxido 100.0 4.8E-54 1.7E-58 376.8 24.8 240 12-257 2-250 (316)
18 3up8_A Putative 2,5-diketo-D-g 100.0 8E-55 2.7E-59 378.1 19.2 216 9-257 21-236 (298)
19 3h7r_A Aldo-keto reductase; st 100.0 9.6E-55 3.3E-59 383.1 19.2 240 6-257 20-259 (331)
20 1mzr_A 2,5-diketo-D-gluconate 100.0 4.1E-54 1.4E-58 373.2 21.9 221 6-257 19-239 (296)
21 4gie_A Prostaglandin F synthas 100.0 6.9E-54 2.4E-58 371.4 22.5 221 7-257 9-229 (290)
22 3krb_A Aldose reductase; ssgci 100.0 1.7E-53 5.7E-58 375.9 24.5 233 19-257 20-267 (334)
23 3n2t_A Putative oxidoreductase 100.0 2.7E-53 9.2E-58 376.6 22.2 225 3-257 13-285 (348)
24 1ur3_M Hypothetical oxidoreduc 100.0 1.7E-53 5.7E-58 373.6 19.2 227 9-257 20-268 (319)
25 2bgs_A Aldose reductase; holoe 100.0 8E-53 2.7E-57 372.3 23.6 233 12-257 36-270 (344)
26 1vp5_A 2,5-diketo-D-gluconic a 100.0 4.4E-53 1.5E-57 367.1 21.4 218 13-257 15-232 (298)
27 3eau_A Voltage-gated potassium 100.0 3.5E-53 1.2E-57 373.0 20.9 225 11-257 2-274 (327)
28 1pyf_A IOLS protein; beta-alph 100.0 1.5E-53 5.3E-58 373.0 18.4 220 12-257 1-264 (312)
29 1pz1_A GSP69, general stress p 100.0 5.9E-53 2E-57 372.4 20.9 221 12-257 1-265 (333)
30 3b3d_A YTBE protein, putative 100.0 7.3E-53 2.5E-57 368.7 21.0 224 6-257 34-257 (314)
31 3lut_A Voltage-gated potassium 100.0 7.7E-53 2.6E-57 376.2 21.1 225 10-257 36-308 (367)
32 3n6q_A YGHZ aldo-keto reductas 100.0 4E-52 1.4E-56 368.9 24.9 233 4-257 5-286 (346)
33 3erp_A Putative oxidoreductase 100.0 3.2E-52 1.1E-56 370.3 22.1 227 10-257 32-303 (353)
34 4gac_A Alcohol dehydrogenase [ 100.0 2.7E-52 9.4E-57 366.9 21.0 241 12-257 2-249 (324)
35 1lqa_A TAS protein; TIM barrel 100.0 4.2E-52 1.5E-56 368.8 20.9 238 12-257 1-293 (346)
36 3v0s_A Perakine reductase; AKR 100.0 7.1E-53 2.4E-57 372.4 15.5 220 12-257 1-264 (337)
37 4exb_A Putative uncharacterize 100.0 5E-52 1.7E-56 359.9 17.6 211 5-257 23-256 (292)
38 1ynp_A Oxidoreductase, AKR11C1 100.0 2.3E-51 7.8E-56 359.8 17.9 219 9-257 18-261 (317)
39 1gve_A Aflatoxin B1 aldehyde r 100.0 4.4E-50 1.5E-54 353.3 15.6 213 23-257 4-264 (327)
40 2bp1_A Aflatoxin B1 aldehyde r 100.0 9.6E-50 3.3E-54 355.2 16.2 215 21-257 35-297 (360)
41 3cf4_A Acetyl-COA decarboxylas 97.4 0.00012 4.1E-09 70.8 4.8 100 108-229 231-351 (807)
42 3gd6_A Muconate cycloisomerase 92.8 1.9 6.5E-05 37.9 13.0 153 37-224 141-299 (391)
43 1r0m_A N-acylamino acid racema 92.0 3.4 0.00012 35.9 13.4 147 38-223 148-299 (375)
44 1mdl_A Mandelate racemase; iso 91.4 6.4 0.00022 33.8 15.9 149 37-221 143-298 (359)
45 2ovl_A Putative racemase; stru 91.0 7.2 0.00025 33.7 15.8 149 38-222 146-301 (371)
46 2yci_X 5-methyltetrahydrofolat 90.6 3.9 0.00014 34.0 11.8 130 100-256 32-167 (271)
47 3mwc_A Mandelate racemase/muco 90.5 4.4 0.00015 35.6 12.7 149 39-224 164-316 (400)
48 2og9_A Mandelate racemase/muco 90.2 6.3 0.00022 34.4 13.4 148 38-221 162-316 (393)
49 2oz8_A MLL7089 protein; struct 89.8 9.5 0.00032 33.2 16.2 151 38-220 145-296 (389)
50 3q45_A Mandelate racemase/muco 89.7 9.3 0.00032 33.0 14.2 152 37-224 139-296 (368)
51 2gl5_A Putative dehydratase pr 89.6 10 0.00035 33.2 15.2 150 37-222 149-328 (410)
52 2zc8_A N-acylamino acid racema 89.2 4.6 0.00016 34.9 11.7 147 38-223 141-292 (369)
53 4djd_D C/Fe-SP, corrinoid/iron 89.2 2.1 7.2E-05 36.7 9.1 124 104-256 82-212 (323)
54 2nql_A AGR_PAT_674P, isomerase 89.2 5.2 0.00018 34.9 12.0 151 38-224 164-319 (388)
55 1nu5_A Chloromuconate cycloiso 88.9 11 0.00036 32.6 15.3 151 38-224 142-300 (370)
56 2pp0_A L-talarate/galactarate 88.8 9.5 0.00032 33.4 13.5 147 38-221 175-329 (398)
57 3i6e_A Muconate cycloisomerase 88.7 11 0.00037 32.9 13.7 150 38-224 148-304 (385)
58 2poz_A Putative dehydratase; o 88.0 13 0.00043 32.4 13.9 154 37-223 136-310 (392)
59 2o56_A Putative mandelate race 88.0 13 0.00044 32.5 15.5 150 38-223 152-326 (407)
60 2p8b_A Mandelate racemase/muco 88.0 8.9 0.0003 33.0 12.7 150 38-224 141-298 (369)
61 3qtp_A Enolase 1; glycolysis, 87.8 15 0.0005 32.8 14.2 96 99-221 279-380 (441)
62 2qgy_A Enolase from the enviro 87.6 14 0.00046 32.2 16.4 150 37-222 148-304 (391)
63 1sjd_A N-acylamino acid racema 87.4 13 0.00045 31.9 14.8 148 38-223 141-293 (368)
64 2ox4_A Putative mandelate race 87.4 11 0.00038 32.9 13.1 151 37-223 145-320 (403)
65 3rr1_A GALD, putative D-galact 87.3 15 0.0005 32.3 14.1 150 37-222 124-288 (405)
66 3ozy_A Putative mandelate race 87.3 14 0.00049 32.1 15.2 149 37-221 150-305 (389)
67 2qq6_A Mandelate racemase/muco 86.8 12 0.00042 32.7 13.1 150 38-223 149-321 (410)
68 2rdx_A Mandelate racemase/muco 86.7 15 0.00051 31.8 14.7 149 38-223 145-297 (379)
69 1tzz_A Hypothetical protein L1 86.0 17 0.00056 31.7 15.0 149 38-220 165-325 (392)
70 3qld_A Mandelate racemase/muco 86.0 17 0.00057 31.7 14.1 149 38-224 149-301 (388)
71 1tkk_A Similar to chloromucona 85.9 16 0.00054 31.4 14.3 153 38-224 140-299 (366)
72 2qde_A Mandelate racemase/muco 85.7 11 0.00036 33.0 12.0 149 38-224 145-301 (397)
73 3eez_A Putative mandelate race 84.8 9.3 0.00032 33.2 11.1 152 37-225 144-299 (378)
74 1wuf_A Hypothetical protein LI 84.5 16 0.00056 31.8 12.6 147 38-224 161-313 (393)
75 3stp_A Galactonate dehydratase 84.4 12 0.0004 33.0 11.6 149 37-221 178-339 (412)
76 3jva_A Dipeptide epimerase; en 84.2 19 0.00065 30.8 15.0 151 37-223 138-294 (354)
77 4dwd_A Mandelate racemase/muco 84.2 21 0.0007 31.2 13.3 149 37-222 138-300 (393)
78 2h9a_B CO dehydrogenase/acetyl 84.1 6.9 0.00024 33.2 9.6 122 104-256 76-205 (310)
79 1rvk_A Isomerase/lactonizing e 83.6 21 0.00071 30.8 14.9 148 37-220 148-309 (382)
80 2hxt_A L-fuconate dehydratase; 83.5 23 0.0008 31.3 14.3 147 37-220 197-351 (441)
81 2qdd_A Mandelate racemase/muco 82.7 23 0.00077 30.6 13.2 150 38-224 145-298 (378)
82 3dg3_A Muconate cycloisomerase 82.6 19 0.00066 31.0 12.2 151 38-224 139-296 (367)
83 3ro6_B Putative chloromuconate 82.3 13 0.00044 32.0 10.9 152 37-224 139-297 (356)
84 3fv9_G Mandelate racemase/muco 82.0 12 0.00042 32.5 10.8 153 37-225 144-305 (386)
85 3r0u_A Enzyme of enolase super 81.6 26 0.00087 30.4 17.1 154 37-225 141-301 (379)
86 2gdq_A YITF; mandelate racemas 81.6 25 0.00087 30.4 12.9 146 40-220 141-293 (382)
87 3s5s_A Mandelate racemase/muco 81.6 26 0.00088 30.5 12.6 154 37-225 143-302 (389)
88 3bjs_A Mandelate racemase/muco 81.2 28 0.00097 30.7 13.2 146 38-220 184-338 (428)
89 4e5t_A Mandelate racemase / mu 80.9 28 0.00096 30.4 14.6 150 37-222 150-318 (404)
90 1eye_A DHPS 1, dihydropteroate 80.6 24 0.00081 29.4 13.7 136 100-256 27-175 (280)
91 2hzg_A Mandelate racemase/muco 80.6 28 0.00096 30.3 14.5 150 38-220 145-304 (401)
92 3my9_A Muconate cycloisomerase 80.6 15 0.00051 31.8 10.7 150 38-223 146-302 (377)
93 3sjn_A Mandelate racemase/muco 80.5 15 0.00051 31.8 10.7 149 38-222 146-304 (374)
94 1f6y_A 5-methyltetrahydrofolat 80.1 18 0.00061 29.8 10.5 130 100-256 23-158 (262)
95 4e8g_A Enolase, mandelate race 79.9 30 0.001 30.1 13.0 151 37-225 163-320 (391)
96 3ddm_A Putative mandelate race 79.7 18 0.00063 31.5 11.1 148 39-221 156-309 (392)
97 2pgw_A Muconate cycloisomerase 79.4 30 0.001 29.9 16.4 152 37-223 146-301 (384)
98 3r4e_A Mandelate racemase/muco 77.9 25 0.00085 30.9 11.4 151 37-223 142-331 (418)
99 1wue_A Mandelate racemase/muco 77.5 25 0.00086 30.4 11.3 148 38-224 161-313 (386)
100 2q5c_A NTRC family transcripti 77.5 9.8 0.00033 29.8 7.8 66 150-220 80-148 (196)
101 2zad_A Muconate cycloisomerase 77.3 33 0.0011 29.1 14.7 152 38-224 139-295 (345)
102 1tx2_A DHPS, dihydropteroate s 77.2 25 0.00084 29.6 10.6 93 153-256 103-202 (297)
103 4e4u_A Mandalate racemase/muco 77.0 38 0.0013 29.7 15.1 149 37-221 143-310 (412)
104 3sbf_A Mandelate racemase / mu 76.8 37 0.0013 29.6 13.0 151 37-223 132-312 (401)
105 4dye_A Isomerase; enolase fami 75.5 26 0.00088 30.7 10.8 146 39-223 169-321 (398)
106 1vyr_A Pentaerythritol tetrani 75.1 30 0.001 29.9 10.9 82 89-189 229-318 (364)
107 2pju_A Propionate catabolism o 74.6 13 0.00043 30.0 7.9 68 150-220 92-160 (225)
108 3tji_A Mandelate racemase/muco 74.1 34 0.0012 30.1 11.3 150 37-222 153-332 (422)
109 4hpn_A Putative uncharacterize 74.0 42 0.0014 28.8 11.7 145 40-220 146-296 (378)
110 2r14_A Morphinone reductase; H 73.9 28 0.00094 30.3 10.4 83 89-189 234-323 (377)
111 3v7e_A Ribosome-associated pro 73.8 2.5 8.4E-05 28.4 2.9 58 157-221 3-60 (82)
112 2ps2_A Putative mandelate race 73.7 35 0.0012 29.2 11.2 151 38-225 146-301 (371)
113 4a35_A Mitochondrial enolase s 73.7 48 0.0016 29.4 14.8 149 37-221 200-357 (441)
114 1ydn_A Hydroxymethylglutaryl-C 73.5 13 0.00044 31.0 8.0 128 102-252 25-171 (295)
115 1wv2_A Thiazole moeity, thiazo 73.3 38 0.0013 27.9 16.9 174 12-220 8-193 (265)
116 3rcy_A Mandelate racemase/muco 72.4 51 0.0017 29.1 14.1 150 37-222 145-313 (433)
117 3t6c_A RSPA, putative MAND fam 72.4 52 0.0018 29.1 13.2 67 154-222 280-350 (440)
118 2gou_A Oxidoreductase, FMN-bin 71.2 38 0.0013 29.2 10.6 35 155-189 283-317 (365)
119 3i4k_A Muconate lactonizing en 71.1 50 0.0017 28.5 18.6 152 37-224 147-306 (383)
120 3toy_A Mandelate racemase/muco 71.0 51 0.0017 28.5 14.2 150 37-222 166-323 (383)
121 3u9i_A Mandelate racemase/muco 71.0 52 0.0018 28.6 13.4 154 37-225 164-331 (393)
122 3otr_A Enolase; structural gen 70.9 58 0.002 29.1 12.2 98 99-221 281-383 (452)
123 2ozt_A TLR1174 protein; struct 70.9 47 0.0016 28.0 15.6 154 38-224 116-275 (332)
124 4h1z_A Enolase Q92ZS5; dehydra 70.1 56 0.0019 28.6 15.1 153 37-225 187-344 (412)
125 3p3b_A Mandelate racemase/muco 69.6 53 0.0018 28.4 11.4 144 40-220 150-311 (392)
126 4hb7_A Dihydropteroate synthas 68.7 49 0.0017 27.4 13.3 97 150-257 67-169 (270)
127 3ik4_A Mandelate racemase/muco 68.5 56 0.0019 28.0 14.8 154 37-225 142-301 (365)
128 4h83_A Mandelate racemase/muco 68.4 58 0.002 28.1 11.6 162 22-220 150-318 (388)
129 1aj0_A DHPS, dihydropteroate s 68.1 51 0.0017 27.4 12.9 97 150-256 75-183 (282)
130 3qy7_A Tyrosine-protein phosph 67.4 50 0.0017 27.0 10.3 182 37-252 17-220 (262)
131 4djd_C C/Fe-SP, corrinoid/iron 67.3 43 0.0015 29.9 10.1 118 101-251 104-227 (446)
132 3v3w_A Starvation sensing prot 67.2 66 0.0022 28.3 11.9 151 37-223 148-337 (424)
133 3ugv_A Enolase; enzyme functio 66.1 51 0.0018 28.6 10.5 151 37-223 170-330 (390)
134 2akz_A Gamma enolase, neural; 65.9 64 0.0022 28.6 11.2 94 100-220 271-369 (439)
135 1icp_A OPR1, 12-oxophytodienoa 65.0 39 0.0013 29.3 9.5 127 41-189 168-325 (376)
136 3vcn_A Mannonate dehydratase; 64.5 74 0.0025 27.9 11.9 151 37-223 149-338 (425)
137 3j21_Z 50S ribosomal protein L 64.5 17 0.00057 25.0 5.7 61 153-220 3-63 (99)
138 4hnl_A Mandelate racemase/muco 63.7 75 0.0026 27.7 11.8 151 38-224 153-333 (421)
139 3pdi_B Nitrogenase MOFE cofact 63.7 43 0.0015 29.8 9.7 111 62-192 73-201 (458)
140 1nvm_A HOA, 4-hydroxy-2-oxoval 63.3 45 0.0015 28.4 9.5 105 103-220 30-139 (345)
141 1chr_A Chloromuconate cycloiso 62.4 74 0.0025 27.2 15.7 151 39-225 143-301 (370)
142 4had_A Probable oxidoreductase 62.1 57 0.002 27.3 9.9 86 157-251 40-139 (350)
143 4h3d_A 3-dehydroquinate dehydr 62.1 63 0.0022 26.3 17.3 130 11-174 9-147 (258)
144 3l5l_A Xenobiotic reductase A; 62.0 68 0.0023 27.5 10.4 136 37-189 148-320 (363)
145 3p6l_A Sugar phosphate isomera 61.8 41 0.0014 26.8 8.6 86 154-251 25-130 (262)
146 3tj4_A Mandelate racemase; eno 61.4 78 0.0027 27.1 15.8 149 37-221 150-306 (372)
147 2al1_A Enolase 1, 2-phospho-D- 61.2 83 0.0028 27.8 11.0 94 100-220 274-372 (436)
148 3l9c_A 3-dehydroquinate dehydr 61.0 67 0.0023 26.3 9.8 97 14-123 27-130 (259)
149 1kko_A 3-methylaspartate ammon 60.7 73 0.0025 27.8 10.6 71 151-223 282-361 (413)
150 2y5s_A DHPS, dihydropteroate s 60.4 39 0.0013 28.3 8.3 97 150-256 83-191 (294)
151 2lbw_A H/ACA ribonucleoprotein 60.2 32 0.0011 24.5 6.8 64 151-220 6-69 (121)
152 3fcp_A L-Ala-D/L-Glu epimerase 59.6 85 0.0029 27.0 12.3 151 38-224 147-305 (381)
153 2xzm_U Ribosomal protein L7AE 59.2 36 0.0012 24.6 6.9 64 152-221 7-74 (126)
154 3k13_A 5-methyltetrahydrofolat 59.0 80 0.0027 26.5 12.9 133 100-256 35-176 (300)
155 3mkc_A Racemase; metabolic pro 58.5 91 0.0031 27.0 14.1 146 41-222 160-316 (394)
156 3mqt_A Mandelate racemase/muco 58.4 91 0.0031 27.0 13.8 146 41-222 155-311 (394)
157 1ydo_A HMG-COA lyase; TIM-barr 57.7 47 0.0016 27.9 8.4 100 102-219 27-140 (307)
158 3va8_A Probable dehydratase; e 57.4 64 0.0022 28.6 9.6 148 37-224 190-345 (445)
159 3go2_A Putative L-alanine-DL-g 57.0 90 0.0031 27.2 10.5 66 154-221 251-319 (409)
160 2ftp_A Hydroxymethylglutaryl-C 56.0 87 0.003 26.0 9.9 128 102-252 29-175 (302)
161 3cpq_A 50S ribosomal protein L 55.6 20 0.00068 25.2 4.9 63 151-220 7-69 (110)
162 2ale_A SNU13, NHP2/L7AE family 55.0 27 0.00094 25.5 5.7 64 151-220 18-81 (134)
163 3tr9_A Dihydropteroate synthas 54.4 92 0.0031 26.3 9.6 95 153-256 93-197 (314)
164 3o85_A Ribosomal protein L7AE; 54.3 35 0.0012 24.4 6.2 65 150-220 16-80 (122)
165 1vq8_F 50S ribosomal protein L 54.3 35 0.0012 24.3 6.1 64 151-220 15-78 (120)
166 2vp8_A Dihydropteroate synthas 53.6 91 0.0031 26.4 9.5 63 152-221 103-167 (318)
167 2chr_A Chloromuconate cycloiso 53.0 1.1E+02 0.0036 26.1 14.4 152 38-225 143-301 (370)
168 3iz5_f 60S ribosomal protein L 52.6 20 0.00069 25.4 4.5 64 150-220 11-74 (112)
169 3vdg_A Probable glucarate dehy 52.4 69 0.0024 28.4 9.0 147 37-223 192-346 (445)
170 2fc3_A 50S ribosomal protein L 52.1 33 0.0011 24.5 5.7 64 151-220 14-77 (124)
171 1rlg_A 50S ribosomal protein L 51.4 35 0.0012 24.2 5.7 65 150-220 12-76 (119)
172 3vc5_A Mandelate racemase/muco 51.0 1E+02 0.0036 27.1 10.0 147 37-223 187-341 (441)
173 3v7q_A Probable ribosomal prot 51.0 37 0.0013 23.3 5.7 62 152-220 6-67 (101)
174 3dgb_A Muconate cycloisomerase 50.7 1.2E+02 0.0041 26.0 13.4 151 38-224 148-306 (382)
175 1w41_A 50S ribosomal protein L 49.7 24 0.00082 24.2 4.5 61 153-220 4-64 (101)
176 3moi_A Probable dehydrogenase; 48.9 84 0.0029 26.9 8.9 86 158-252 20-118 (387)
177 3ekg_A Mandelate racemase/muco 48.7 74 0.0025 27.8 8.5 66 154-221 250-321 (404)
178 3uj2_A Enolase 1; enzyme funct 48.2 1.1E+02 0.0038 27.1 9.7 95 100-221 290-391 (449)
179 3rc1_A Sugar 3-ketoreductase; 46.5 96 0.0033 26.1 8.8 88 156-252 43-143 (350)
180 4h62_V Mediator of RNA polymer 46.3 9.1 0.00031 19.7 1.3 18 169-186 4-21 (31)
181 4hkt_A Inositol 2-dehydrogenas 46.2 1.3E+02 0.0043 25.0 9.5 85 158-251 20-116 (331)
182 1zh8_A Oxidoreductase; TM0312, 45.3 99 0.0034 25.9 8.6 86 157-251 35-135 (340)
183 3e9m_A Oxidoreductase, GFO/IDH 45.0 1.1E+02 0.0036 25.5 8.8 85 158-251 22-120 (330)
184 1q7z_A 5-methyltetrahydrofolat 44.8 1.5E+02 0.0052 27.1 10.2 80 168-256 386-471 (566)
185 2dqw_A Dihydropteroate synthas 44.2 1.2E+02 0.0042 25.2 8.8 67 149-222 88-154 (294)
186 3ezy_A Dehydrogenase; structur 43.6 1E+02 0.0035 25.7 8.5 86 157-251 18-117 (344)
187 3dty_A Oxidoreductase, GFO/IDH 43.5 1.2E+02 0.0039 26.1 8.9 84 160-252 34-139 (398)
188 3db2_A Putative NADPH-dependen 43.4 1.2E+02 0.0042 25.3 9.0 86 157-251 21-119 (354)
189 1vpq_A Hypothetical protein TM 42.8 1.4E+02 0.0047 24.5 9.0 99 23-130 12-130 (273)
190 2ptz_A Enolase; lyase, glycoly 42.4 1.8E+02 0.006 25.6 11.0 79 121-221 289-374 (432)
191 1jpd_X L-Ala-D/L-Glu epimerase 42.0 1.2E+02 0.004 25.3 8.5 148 38-225 132-282 (324)
192 1z41_A YQJM, probable NADH-dep 42.0 1.6E+02 0.0053 24.8 12.1 127 42-189 146-302 (338)
193 2bas_A YKUI protein; EAL domai 42.0 90 0.0031 27.3 8.0 115 86-221 105-234 (431)
194 2xvc_A ESCRT-III, SSO0910; cel 41.6 26 0.00089 21.7 3.0 19 149-167 38-56 (59)
195 4e4f_A Mannonate dehydratase; 40.9 1.8E+02 0.0063 25.4 12.5 67 154-222 268-338 (426)
196 2h9a_A Carbon monoxide dehydro 40.9 1.6E+02 0.0056 26.1 9.5 85 150-251 140-226 (445)
197 2aif_A Ribosomal protein L7A; 40.8 45 0.0015 24.3 5.0 65 150-220 26-90 (135)
198 1t57_A Conserved protein MTH16 40.7 94 0.0032 24.4 6.9 71 149-221 35-112 (206)
199 3tha_A Tryptophan synthase alp 40.6 50 0.0017 27.0 5.7 94 150-253 27-145 (252)
200 2yr1_A 3-dehydroquinate dehydr 40.2 1.5E+02 0.005 24.0 18.5 108 7-124 5-122 (257)
201 3mz0_A Inositol 2-dehydrogenas 39.9 1.6E+02 0.0055 24.4 9.4 87 157-252 18-120 (344)
202 3ks6_A Glycerophosphoryl diest 39.8 1.4E+02 0.0048 23.7 9.5 19 203-221 193-211 (250)
203 1v77_A PH1877P, hypothetical p 39.7 1E+02 0.0036 24.0 7.4 90 159-255 91-195 (212)
204 2fym_A Enolase; RNA degradosom 39.6 1.9E+02 0.0066 25.2 10.0 82 120-223 283-371 (431)
205 4ab4_A Xenobiotic reductase B; 39.5 1.8E+02 0.0062 24.9 10.7 76 89-189 221-303 (362)
206 3tqp_A Enolase; energy metabol 39.3 2E+02 0.0068 25.3 13.3 121 70-221 225-365 (428)
207 3v5n_A Oxidoreductase; structu 39.2 1.6E+02 0.0053 25.5 9.2 84 159-251 58-163 (417)
208 3dip_A Enolase; structural gen 38.5 1.1E+02 0.0036 26.7 7.9 67 154-222 254-324 (410)
209 3l8a_A METC, putative aminotra 38.3 1.8E+02 0.0063 24.6 14.4 147 37-224 74-237 (421)
210 2cw6_A Hydroxymethylglutaryl-C 38.1 93 0.0032 25.7 7.2 101 99-220 24-140 (298)
211 2vef_A Dihydropteroate synthas 37.9 1.4E+02 0.0049 25.0 8.3 67 150-221 70-136 (314)
212 1wa3_A 2-keto-3-deoxy-6-phosph 37.7 63 0.0022 24.8 5.8 59 152-219 50-109 (205)
213 3q2i_A Dehydrogenase; rossmann 37.6 1.7E+02 0.0057 24.5 8.9 86 158-252 30-129 (354)
214 4a18_G RPL30; ribosome, eukary 37.5 48 0.0016 22.9 4.5 63 151-220 8-70 (104)
215 3u5e_c L32, RP73, YL38, 60S ri 36.8 46 0.0016 23.0 4.3 64 150-220 7-70 (105)
216 3on1_A BH2414 protein; structu 36.7 45 0.0015 22.8 4.2 62 152-220 5-66 (101)
217 3ec7_A Putative dehydrogenase; 36.5 1.2E+02 0.0041 25.5 7.8 87 157-252 39-141 (357)
218 3gka_A N-ethylmaleimide reduct 36.5 2E+02 0.0069 24.6 9.4 24 166-189 288-311 (361)
219 3mcm_A 2-amino-4-hydroxy-6-hyd 36.0 1.5E+02 0.0051 26.3 8.4 101 153-256 252-364 (442)
220 1ydw_A AX110P-like protein; st 35.9 1.8E+02 0.0061 24.4 8.8 86 159-252 24-125 (362)
221 3gr7_A NADPH dehydrogenase; fl 35.3 2E+02 0.0069 24.2 11.0 88 87-189 209-302 (340)
222 3fkr_A L-2-keto-3-deoxyarabona 35.2 1.9E+02 0.0066 24.0 10.5 127 98-248 25-164 (309)
223 2p3z_A L-rhamnonate dehydratas 35.2 1.4E+02 0.0049 26.0 8.2 65 154-221 262-332 (415)
224 3lmz_A Putative sugar isomeras 34.9 37 0.0013 27.0 4.1 98 106-253 33-130 (257)
225 1x87_A Urocanase protein; stru 34.3 1.1E+02 0.0038 27.6 7.1 85 84-198 160-263 (551)
226 1olt_A Oxygen-independent copr 34.3 1E+02 0.0034 27.2 7.1 124 44-175 154-291 (457)
227 3ohs_X Trans-1,2-dihydrobenzen 34.0 1.9E+02 0.0066 23.8 8.7 78 165-251 28-119 (334)
228 3kux_A Putative oxidoreductase 34.0 2.1E+02 0.007 23.9 9.2 82 159-251 26-120 (352)
229 3p6l_A Sugar phosphate isomera 33.9 90 0.0031 24.6 6.3 33 26-61 11-43 (262)
230 4dxk_A Mandelate racemase / mu 33.9 75 0.0026 27.6 6.1 66 155-222 251-320 (400)
231 3uuw_A Putative oxidoreductase 33.9 1.6E+02 0.0055 24.0 8.1 85 158-251 24-119 (308)
232 3u7q_A Nitrogenase molybdenum- 33.8 1.8E+02 0.0063 26.0 8.8 142 63-224 125-301 (492)
233 1o94_A Tmadh, trimethylamine d 33.7 2.4E+02 0.0082 26.4 10.0 34 154-187 280-314 (729)
234 3euw_A MYO-inositol dehydrogen 33.0 1.5E+02 0.005 24.7 7.8 85 157-250 20-117 (344)
235 3vnd_A TSA, tryptophan synthas 32.9 1.5E+02 0.0052 24.2 7.5 86 149-248 78-171 (267)
236 2fkn_A Urocanate hydratase; ro 32.7 1.1E+02 0.0037 27.7 6.8 123 43-198 111-264 (552)
237 3v5c_A Mandelate racemase/muco 32.6 71 0.0024 27.7 5.7 87 110-222 219-313 (392)
238 3l23_A Sugar phosphate isomera 32.5 1.9E+02 0.0066 23.5 8.3 95 153-251 31-159 (303)
239 2pa6_A Enolase; glycolysis, ly 32.3 2.5E+02 0.0086 24.4 11.2 96 100-222 268-369 (427)
240 2q02_A Putative cytoplasmic pr 32.1 1.1E+02 0.0039 24.0 6.6 67 155-222 23-106 (272)
241 1uwk_A Urocanate hydratase; hy 32.1 1.1E+02 0.0038 27.6 6.7 123 43-198 115-268 (557)
242 1h6d_A Precursor form of gluco 31.8 2E+02 0.0068 25.0 8.6 88 157-252 100-204 (433)
243 4ggi_A UDP-2,3-diacylglucosami 31.7 43 0.0015 27.8 4.0 42 204-253 234-275 (283)
244 3u3x_A Oxidoreductase; structu 31.5 1.8E+02 0.0063 24.4 8.2 79 164-251 49-141 (361)
245 3no3_A Glycerophosphodiester p 31.4 50 0.0017 26.3 4.3 64 158-221 122-203 (238)
246 2xdq_A Light-independent proto 31.0 94 0.0032 27.4 6.4 59 63-130 79-139 (460)
247 2ho3_A Oxidoreductase, GFO/IDH 30.8 1.5E+02 0.0053 24.3 7.5 87 158-252 18-116 (325)
248 2pge_A MENC; OSBS, NYSGXRC, PS 30.7 2.5E+02 0.0085 23.9 11.9 153 38-225 162-323 (377)
249 3o1n_A 3-dehydroquinate dehydr 30.5 2.2E+02 0.0077 23.3 17.0 132 6-170 24-164 (276)
250 1kcz_A Beta-methylaspartase; b 30.1 1.8E+02 0.0061 25.2 8.0 69 151-221 282-359 (413)
251 3tcs_A Racemase, putative; PSI 30.1 2.6E+02 0.009 24.0 13.9 146 41-222 150-309 (388)
252 4gqa_A NAD binding oxidoreduct 30.0 1.7E+02 0.0056 25.1 7.7 78 165-251 58-149 (412)
253 3m2t_A Probable dehydrogenase; 29.9 1.1E+02 0.0036 25.9 6.3 86 157-251 22-121 (359)
254 1y60_A Formaldehyde-activating 29.6 61 0.0021 24.7 4.1 51 63-114 83-147 (169)
255 1ep3_A Dihydroorotate dehydrog 29.6 2.3E+02 0.0078 23.1 8.7 135 38-186 109-263 (311)
256 3eeg_A 2-isopropylmalate synth 29.2 2.5E+02 0.0087 23.5 10.3 98 104-223 29-144 (325)
257 3qn3_A Enolase; structural gen 29.2 2.9E+02 0.0099 24.1 13.3 122 69-223 224-365 (417)
258 4as2_A Phosphorylcholine phosp 28.4 26 0.0009 29.7 2.1 39 204-255 149-191 (327)
259 1nsj_A PRAI, phosphoribosyl an 28.1 1.8E+02 0.0061 22.6 6.9 65 112-196 18-83 (205)
260 3evn_A Oxidoreductase, GFO/IDH 27.7 76 0.0026 26.4 5.0 84 159-251 23-120 (329)
261 3ec1_A YQEH GTPase; atnos1, at 27.6 2.8E+02 0.0096 23.5 10.6 121 37-182 56-181 (369)
262 3fst_A 5,10-methylenetetrahydr 27.2 2.7E+02 0.0093 23.1 10.4 146 43-216 42-204 (304)
263 2hsa_B 12-oxophytodienoate red 27.0 3.1E+02 0.011 23.7 14.1 37 153-189 307-343 (402)
264 2p0o_A Hypothetical protein DU 26.9 1.6E+02 0.0056 25.4 6.9 153 37-223 14-180 (372)
265 2eq9_C Pyruvate dehydrogenase 26.8 48 0.0016 18.4 2.5 19 238-256 4-22 (41)
266 2eq7_C 2-oxoglutarate dehydrog 26.6 51 0.0018 18.1 2.5 19 238-256 3-21 (40)
267 3e82_A Putative oxidoreductase 26.5 2.2E+02 0.0074 24.0 7.7 82 159-251 26-120 (364)
268 3d0c_A Dihydrodipicolinate syn 26.4 2.8E+02 0.0095 23.0 10.6 106 98-221 29-144 (314)
269 1ps9_A 2,4-dienoyl-COA reducta 26.3 3.8E+02 0.013 24.6 13.0 130 42-186 143-302 (671)
270 3ch0_A Glycerophosphodiester p 26.2 1.7E+02 0.0058 23.4 6.8 21 38-58 21-41 (272)
271 3kki_A CAI-1 autoinducer synth 26.2 1.8E+02 0.0062 24.4 7.3 147 38-225 74-227 (409)
272 1qwg_A PSL synthase;, (2R)-pho 25.8 2E+02 0.007 23.3 6.9 78 40-128 85-170 (251)
273 3rfa_A Ribosomal RNA large sub 25.5 3.3E+02 0.011 23.6 10.2 171 37-225 143-349 (404)
274 3kru_A NADH:flavin oxidoreduct 25.4 3.1E+02 0.01 23.2 11.3 36 154-189 266-302 (343)
275 2eq8_C Pyruvate dehydrogenase 25.2 51 0.0017 18.1 2.3 19 238-256 3-21 (40)
276 4ew6_A D-galactose-1-dehydroge 25.0 1.2E+02 0.0041 25.3 5.8 84 157-251 42-134 (330)
277 2ph5_A Homospermidine synthase 24.8 38 0.0013 30.5 2.6 23 39-61 93-115 (480)
278 3e18_A Oxidoreductase; dehydro 24.7 3.1E+02 0.01 22.9 9.1 84 158-251 22-118 (359)
279 2uyg_A 3-dehydroquinate dehydr 24.3 1.6E+02 0.0054 21.9 5.4 79 99-202 24-105 (149)
280 2r6f_A Excinuclease ABC subuni 24.3 2.9E+02 0.0099 27.2 8.8 61 103-179 480-569 (972)
281 3l5a_A NADH/flavin oxidoreduct 24.2 2.6E+02 0.009 24.4 7.9 90 86-185 241-339 (419)
282 3ijw_A Aminoglycoside N3-acety 24.1 1.2E+02 0.004 25.0 5.2 53 104-167 16-69 (268)
283 3guv_A Site-specific recombina 24.0 76 0.0026 23.5 3.9 46 105-165 59-106 (167)
284 3gdo_A Uncharacterized oxidore 23.8 3E+02 0.01 23.0 8.1 81 160-251 25-118 (358)
285 3ecd_A Serine hydroxymethyltra 23.8 3.2E+02 0.011 22.8 8.8 50 173-222 158-208 (425)
286 4fb5_A Probable oxidoreductase 23.8 1.2E+02 0.0041 25.5 5.6 39 204-250 108-146 (393)
287 4gxw_A Adenosine deaminase; am 23.6 3.5E+02 0.012 23.2 10.1 153 42-223 98-267 (380)
288 2glx_A 1,5-anhydro-D-fructose 23.5 3E+02 0.01 22.4 9.4 84 159-251 19-115 (332)
289 3ewb_X 2-isopropylmalate synth 23.5 3.1E+02 0.011 22.5 8.0 124 105-256 29-170 (293)
290 3p0w_A Mandelate racemase/muco 23.4 2.1E+02 0.0071 25.4 7.2 153 37-223 199-358 (470)
291 3l23_A Sugar phosphate isomera 23.4 3E+02 0.01 22.3 8.7 51 26-76 14-71 (303)
292 1vhn_A Putative flavin oxidore 23.3 90 0.0031 26.0 4.6 120 38-185 69-204 (318)
293 1a6f_A RNAse P protein, ribonu 23.3 1.9E+02 0.0066 20.2 5.7 31 87-117 82-112 (119)
294 1w4i_A Pyruvate dehydrogenase 23.1 58 0.002 20.2 2.5 22 235-256 5-26 (62)
295 3sma_A FRBF; N-acetyl transfer 23.1 1.5E+02 0.0052 24.6 5.8 54 103-167 22-76 (286)
296 2opj_A O-succinylbenzoate-COA 23.0 46 0.0016 28.1 2.7 70 154-225 162-232 (327)
297 3oqb_A Oxidoreductase; structu 22.6 1.5E+02 0.0052 25.0 6.0 22 204-225 97-118 (383)
298 3u5c_M 40S ribosomal protein S 22.6 1.1E+02 0.0037 22.7 4.3 65 151-221 26-92 (143)
299 2pz0_A Glycerophosphoryl diest 22.5 1.6E+02 0.0054 23.4 5.8 62 160-221 138-218 (252)
300 3aek_B Light-independent proto 22.5 1.6E+02 0.0055 26.6 6.4 155 64-252 68-257 (525)
301 2nyg_A YOKD protein; PFAM02522 22.5 1.4E+02 0.0047 24.6 5.4 53 103-166 13-66 (273)
302 1w6t_A Enolase; bacterial infe 22.2 4E+02 0.014 23.3 10.5 78 120-219 295-379 (444)
303 2eee_A Uncharacterized protein 22.1 57 0.002 24.0 2.7 26 22-50 112-137 (149)
304 3fxg_A Rhamnonate dehydratase; 22.0 75 0.0025 28.3 3.9 66 154-221 256-326 (455)
305 2w9m_A Polymerase X; SAXS, DNA 22.0 4.5E+02 0.015 23.9 9.7 95 150-255 435-543 (578)
306 1ivn_A Thioesterase I; hydrola 21.9 1.4E+02 0.0047 22.0 5.1 88 165-254 36-138 (190)
307 3btv_A Galactose/lactose metab 21.9 2.5E+02 0.0084 24.4 7.3 84 160-251 43-148 (438)
308 2b0l_A GTP-sensing transcripti 21.9 1.9E+02 0.0066 19.5 5.6 37 148-184 55-98 (102)
309 3gbx_A Serine hydroxymethyltra 21.8 1.4E+02 0.0047 25.1 5.6 49 174-222 156-205 (420)
310 3mz2_A Glycerophosphoryl diest 21.8 2.2E+02 0.0076 23.3 6.7 64 159-222 150-236 (292)
311 3rnm_E Lipoamide acyltransfera 21.6 71 0.0024 19.6 2.6 22 235-256 8-29 (58)
312 3l12_A Putative glycerophospho 21.5 3.1E+02 0.011 22.5 7.6 36 152-187 165-201 (313)
313 2lju_A Putative oxidoreductase 21.4 75 0.0026 22.3 3.0 22 203-224 69-90 (108)
314 3m9w_A D-xylose-binding peripl 21.3 3.1E+02 0.011 21.8 7.6 40 87-127 157-196 (313)
315 3mzn_A Glucarate dehydratase; 21.2 2.5E+02 0.0084 24.8 7.2 153 37-223 181-340 (450)
316 3vnd_A TSA, tryptophan synthas 21.1 3.3E+02 0.011 22.1 9.1 53 190-252 97-151 (267)
317 3dz1_A Dihydrodipicolinate syn 21.1 3.5E+02 0.012 22.3 9.1 127 98-248 25-162 (313)
318 3o1n_A 3-dehydroquinate dehydr 20.8 3.4E+02 0.012 22.1 11.3 79 37-122 116-195 (276)
319 2glo_A Brinker CG9653-PA; prot 20.8 34 0.0012 20.6 1.0 15 241-255 28-42 (59)
320 3k30_A Histamine dehydrogenase 20.6 4.8E+02 0.016 24.1 9.4 33 155-187 284-317 (690)
321 3e96_A Dihydrodipicolinate syn 20.6 3.6E+02 0.012 22.3 9.0 107 98-222 29-145 (316)
322 3obe_A Sugar phosphate isomera 20.4 3.5E+02 0.012 21.9 9.0 38 25-62 21-58 (305)
323 2nvw_A Galactose/lactose metab 20.4 2.8E+02 0.0097 24.5 7.5 84 158-249 60-165 (479)
324 3gqe_A Non-structural protein 20.3 1.6E+02 0.0056 22.2 5.1 46 205-252 93-138 (168)
325 3eeg_A 2-isopropylmalate synth 20.1 3.8E+02 0.013 22.3 8.9 114 27-161 138-254 (325)
No 1
>1zgd_A Chalcone reductase; polyketide, deoxychalcone, isoflavonoid, biosynthesis, plant protein; HET: NAP; 1.70A {Medicago sativa}
Probab=100.00 E-value=5.6e-57 Score=394.74 Aligned_cols=248 Identities=56% Similarity=0.961 Sum_probs=212.1
Q ss_pred CCCCCCCcee-cCC-CCCcCCccceeCCcCCCCChhHHHHHHHHHHHcCCceeeCCCCCCChHHHHHHHHHHHhCCCCCC
Q 025159 7 MGSISIPDVP-LKS-SNRRMPVLGLGTAASPFSGSETTKLAILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGIIKS 84 (257)
Q Consensus 7 ~~~~~m~~~~-l~~-~~~~vs~lglG~~~~~~~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~~lg~~l~~~~~~~~~~~ 84 (257)
|.+.+|++++ |++ +|++||+|||||+.|+ .+.+++.++|+.|++.|||+||||+.||+|+.+|++|++.++.+.+ +
T Consensus 1 ~~~~~m~~~~~l~~~tg~~v~~lglGt~~~~-~~~~~~~~~v~~Al~~G~~~iDTA~~YgsE~~vG~al~~~~~~g~~-~ 78 (312)
T 1zgd_A 1 MGSVEIPTKVLTNTSSQLKMPVVGMGSAPDF-TCKKDTKDAIIEAIKQGYRHFDTAAAYGSEQALGEALKEAIELGLV-T 78 (312)
T ss_dssp ----CCCEEECTTSTTCCEEESBCBCCSCCT-TCCSCHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSC-C
T ss_pred CCCCCCchhhhcCCCCCCCCCceeEcCcccC-CCHHHHHHHHHHHHHcCCCEEECccccCCHHHHHHHHHHHHhcCCC-c
Confidence 6777899999 998 5699999999994433 3567899999999999999999999999999999999987666632 7
Q ss_pred CCcEEEEeccCCCCCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcC
Q 025159 85 RDELFIASKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLG 164 (257)
Q Consensus 85 R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G 164 (257)
|+++||+||+|..+.+++.+++++++||++||+||||+|+||||+...+++...|...+.......+++|++|++|+++|
T Consensus 79 R~~~~i~TK~~~~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~e~~~ale~l~~~G 158 (312)
T 1zgd_A 79 RDDLFVTSKLWVTENHPHLVIPALQKSLKTLQLDYLDLYLIHWPLSSQPGKFSFPIDVADLLPFDVKGVWESMEESLKLG 158 (312)
T ss_dssp GGGCEEEEEECGGGCSGGGHHHHHHHHHHHHTCSCBSEEEECCSCEECTTCCCSSEEGGGEECCCHHHHHHHHHHHHHTT
T ss_pred chheEEEeccCCCCCCHHHHHHHHHHHHHHhCCCceeEEEEeccCcccCccccccccccccccccHHHHHHHHHHHHHcC
Confidence 99999999999888889999999999999999999999999999754332222221111111345789999999999999
Q ss_pred CeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCCCCCCCCccChHHHHHH
Q 025159 165 YTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTIWGSNRVMECEVLKEI 244 (257)
Q Consensus 165 ~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~l~~~~~~~~~~~~~~i 244 (257)
|||+||||||++++++++++.+.++|.++|++||+++++.+++++|+++||++++|+||+. |.+++....+..+.+.++
T Consensus 159 kir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~-G~~~~~~~~~~~~~l~~i 237 (312)
T 1zgd_A 159 LTKAIGVSNFSVKKLENLLSVATVLPAVNQVEMNLAWQQKKLREFCNAHGIVLTAFSPVRK-GASRGPNEVMENDMLKEI 237 (312)
T ss_dssp SBSCEEEESCCHHHHHHHHTTCSSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTTT-TTTTSSCTTTTCHHHHHH
T ss_pred CCCEEEEeCCCHHHHHHHHHhCCCCceEEeeecCcccCCHHHHHHHHHcCCEEEEecCCCC-CCCCCCccccccHHHHHH
Confidence 9999999999999999999999899999999999999988999999999999999999997 877665556678999999
Q ss_pred HHHhCCCcccccC
Q 025159 245 AEAKGKTVAQVLI 257 (257)
Q Consensus 245 a~~~~~s~~qval 257 (257)
|++||+|++|+||
T Consensus 238 a~~~g~s~aqvaL 250 (312)
T 1zgd_A 238 ADAHGKSVAQISL 250 (312)
T ss_dssp HHHHTSCHHHHHH
T ss_pred HHHcCCCHHHHHH
Confidence 9999999999985
No 2
>3h7u_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.25A {Arabidopsis thaliana}
Probab=100.00 E-value=1.6e-56 Score=395.14 Aligned_cols=247 Identities=45% Similarity=0.805 Sum_probs=212.3
Q ss_pred ccCCCCCCCCCceecCCCCCcCCccceeCCcCCCCChhHHHHHHHHHHHcCCceeeCCCCCCChHHHHHHHHHHHhCCCC
Q 025159 3 QGSEMGSISIPDVPLKSSNRRMPVLGLGTAASPFSGSETTKLAILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGII 82 (257)
Q Consensus 3 ~~~~~~~~~m~~~~l~~~~~~vs~lglG~~~~~~~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~~lg~~l~~~~~~~~~ 82 (257)
+|+.|++ .|++++|++| ++||+||||||+ .+.+++.++|+.|++.|||+||||+.||+|+.+|++|++.++++.+
T Consensus 17 ~~~~~~~-~m~~~~L~tg-~~v~~lglGt~~---~~~~~~~~~v~~Al~~Gi~~~DTA~~YgsE~~lG~al~~~~~~g~~ 91 (335)
T 3h7u_A 17 RGSHMAN-AITFFKLNTG-AKFPSVGLGTWQ---ASPGLVGDAVAAAVKIGYRHIDCAQIYGNEKEIGAVLKKLFEDRVV 91 (335)
T ss_dssp --------CCCEEECTTS-CEEESBCEECTT---CCHHHHHHHHHHHHHHTCCEEECCGGGSCHHHHHHHHHHHHHTTSC
T ss_pred CChhhcc-CCceEEcCCC-CEecceeEeCCc---CCHHHHHHHHHHHHHcCCCEEECCcccCCHHHHHHHHHHHHhcCCC
Confidence 4556665 5999999866 999999999998 5778999999999999999999999999999999999998776644
Q ss_pred CCCCcEEEEeccCCCCCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHH
Q 025159 83 KSRDELFIASKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQN 162 (257)
Q Consensus 83 ~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 162 (257)
+|+++||+||+|..+.+++.+++++++||++||+||||+|+||||+...++. .+| ..+.......+++|++|++|++
T Consensus 92 -~R~~v~I~TK~~~~~~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~-~~~-~~~~~~~~~~~e~~~aL~~l~~ 168 (335)
T 3h7u_A 92 -KREDLFITSKLWCTDHDPQDVPEALNRTLKDLQLEYVDLYLIHWPARIKKGS-VGI-KPENLLPVDIPSTWKAMEALYD 168 (335)
T ss_dssp -CGGGCEEEEEECGGGCSTTHHHHHHHHHHHHHTCSCBSEEEECSSCEECSSC-SSC-CGGGEECCCHHHHHHHHHHHHH
T ss_pred -CcceeEEEeeeCCCCCCHHHHHHHHHHHHHHcCCCceeEEEEcCCCcccccc-ccc-cccccccCCHHHHHHHHHHHHH
Confidence 7999999999998888899999999999999999999999999997644322 111 1111223458999999999999
Q ss_pred cCCeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCCCCCCCCccChHHHH
Q 025159 163 LGYTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTIWGSNRVMECEVLK 242 (257)
Q Consensus 163 ~G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~l~~~~~~~~~~~~~ 242 (257)
+||||+||||||++++++++++.+.++|.++|++||+++++.+++++|+++||++++|+||+++|..+++...+..+.+.
T Consensus 169 ~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~sPL~~g~~~~~~~~~~~~~~l~ 248 (335)
T 3h7u_A 169 SGKARAIGVSNFSTKKLADLLELARVPPAVNQVECHPSWRQTKLQEFCKSKGVHLSAYSPLGSPGTTWLKSDVLKNPILN 248 (335)
T ss_dssp TTSBSSEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTCCTTCTTSCCCGGGCHHHH
T ss_pred cCCccEEEecCCCHHHHHHHHHhCCCCeEEEecccccccCCHHHHHHHHHCCCEEEEeccCcCCCCCCCCccccccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998634455555666789999
Q ss_pred HHHHHhCCCcccccC
Q 025159 243 EIAEAKGKTVAQVLI 257 (257)
Q Consensus 243 ~ia~~~~~s~~qval 257 (257)
++|++||+|++|+||
T Consensus 249 ~iA~~~g~t~aqvaL 263 (335)
T 3h7u_A 249 MVAEKLGKSPAQVAL 263 (335)
T ss_dssp HHHHHHTCCHHHHHH
T ss_pred HHHHHHCcCHHHHHH
Confidence 999999999999985
No 3
>3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} SCOP: c.1.7.1
Probab=100.00 E-value=1e-55 Score=388.68 Aligned_cols=244 Identities=36% Similarity=0.653 Sum_probs=213.1
Q ss_pred CCCceecCCCCCcCCccceeCCcCCCCChhHHHHHHHHHHHcCCceeeCCCCCCChHHHHHHHHHHHhCCCCCCCCcEEE
Q 025159 11 SIPDVPLKSSNRRMPVLGLGTAASPFSGSETTKLAILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGIIKSRDELFI 90 (257)
Q Consensus 11 ~m~~~~l~~~~~~vs~lglG~~~~~~~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~~lg~~l~~~~~~~~~~~R~~l~i 90 (257)
.|++++|++| ++||.||||||+++..+.+++.++|+.|++.|||+||||+.||+|+.+|++|++.++++.+ +|+++||
T Consensus 5 ~m~~~~L~tg-~~v~~lglGt~~~~~~~~~~~~~~v~~Al~~Gi~~~DTA~~Yg~E~~lG~al~~~~~~~~~-~R~~~~I 82 (324)
T 3ln3_A 5 XQHCVXLNDG-HLIPALGFGTYXPXEVPXSXSLEAACLALDVGYRHVDTAYAYQVEEEIGQAIQSXIXAGVV-XREDLFV 82 (324)
T ss_dssp -CCEEECTTS-CEEESSEEECCCCTTSCHHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSC-CGGGCEE
T ss_pred CCceEECCCC-CCcCCeeecCCcccCCChHHHHHHHHHHHHcCCCEEECcccccCHHHHHHHHHHhhccCCc-ccceeEE
Confidence 5999999555 9999999999998767889999999999999999999999999999999999998776633 7999999
Q ss_pred EeccCCCCCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCccc---CCCCccHHHHHHHHHHHHHcCCee
Q 025159 91 ASKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKE---DFLPMDFKSVWEAMEECQNLGYTK 167 (257)
Q Consensus 91 ~tK~~~~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~G~ir 167 (257)
+||+|....+++.+++++++||++||+||||+|+||||+...+++...|...+ .+......++|++|++|+++||||
T Consensus 83 ~TK~~~~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~al~~l~~~Gkir 162 (324)
T 3ln3_A 83 TTKLWCTCFRPELVXPALEXSLXXLQLDYVDLYIMHYPVPMXSGDNDFPVNEQGXSLLDTVDFCDTWERLEECXDAGLVX 162 (324)
T ss_dssp EEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEESCSCCBCCSSCSSCBCTTCCBCBCCCCHHHHHHHHHHHHHTTSEE
T ss_pred EeeeCCccCCHHHHHHHHHHHHHHhCCCcceEEEEecCccccccccccccccccccccccCCHHHHHHHHHHHHhcCCee
Confidence 99999888899999999999999999999999999999875543333332211 123456899999999999999999
Q ss_pred EEEecCCCHHHHHHHHHhCCCC--CceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCCCCC-----CCCccChHH
Q 025159 168 AIGVSNFSCKKLGDILATAKIP--PAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTIWG-----SNRVMECEV 240 (257)
Q Consensus 168 ~iGvs~~~~~~l~~~~~~~~~~--p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~l~~-----~~~~~~~~~ 240 (257)
+||||||++++++++++.+.++ |.++|++||++.++.+++++|+++||++++|+||++ |.+.. .+..+..+.
T Consensus 163 ~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~-g~~~~~~~~~~~~~~~~~~ 241 (324)
T 3ln3_A 163 SIGVSNFNHRQLERILNXPGLXYXPVCNQVECHLYLNQRXLLDYCESXDIVLVAYGALGT-QRYXEWVDQNSPVLLNDPV 241 (324)
T ss_dssp EEEEESCCHHHHHHHHTCTTCCCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTSC-CCCTTTSCTTSCCGGGCHH
T ss_pred EEEecCCcHHHHHHHHHhcCccCCceeeEeeeCcccchHHHHHHHHHcCCEEEEecCCCC-CCcccccccCCcchhcCHH
Confidence 9999999999999999988877 999999999999889999999999999999999997 87431 112345689
Q ss_pred HHHHHHHhCCCcccccC
Q 025159 241 LKEIAEAKGKTVAQVLI 257 (257)
Q Consensus 241 ~~~ia~~~~~s~~qval 257 (257)
+.++|++||+|++||||
T Consensus 242 l~~ia~~~g~t~aqvaL 258 (324)
T 3ln3_A 242 LCDVAXXNXRSPALIAL 258 (324)
T ss_dssp HHHHHHHHTSCHHHHHH
T ss_pred HHHHHHhhCCCHHHHHH
Confidence 99999999999999985
No 4
>3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A*
Probab=100.00 E-value=9.2e-56 Score=380.65 Aligned_cols=219 Identities=42% Similarity=0.732 Sum_probs=203.9
Q ss_pred CCCCCCCceecCCCCCcCCccceeCCcCCCCChhHHHHHHHHHHHcCCceeeCCCCCCChHHHHHHHHHHHhCCCCCCCC
Q 025159 7 MGSISIPDVPLKSSNRRMPVLGLGTAASPFSGSETTKLAILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGIIKSRD 86 (257)
Q Consensus 7 ~~~~~m~~~~l~~~~~~vs~lglG~~~~~~~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~~lg~~l~~~~~~~~~~~R~ 86 (257)
|+...|++++|++| ++||+||||||+++ +.+++.++|+.|++.|||+||||+.||+|+.+|++|++. ++ +|+
T Consensus 1 m~~~~m~~~~L~~g-~~v~~lglGt~~~~--~~~~~~~~l~~Al~~G~~~~DTA~~Yg~E~~lG~al~~~---~~--~R~ 72 (276)
T 3f7j_A 1 MPTSLKDTVKLHNG-VEMPWFGLGVFKVE--NGNEATESVKAAIKNGYRSIDTAAIYKNEEGVGIGIKES---GV--ARE 72 (276)
T ss_dssp CCSSTTCEEECTTS-CEEESBCEECTTCC--TTHHHHHHHHHHHHTTCCEEECCGGGSCHHHHHHHHHHH---CS--CGG
T ss_pred CCcCCcceEECCCC-CEecceeecCCcCC--CHHHHHHHHHHHHHcCCCEEECcCcccCHHHHHHHHhhc---CC--Ccc
Confidence 66778999999965 99999999999974 568899999999999999999999999999999999987 76 799
Q ss_pred cEEEEeccCCCCCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe
Q 025159 87 ELFIASKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT 166 (257)
Q Consensus 87 ~l~i~tK~~~~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i 166 (257)
++||+||+|..+.+++.+++++++||++||+||||+|++|||+.. ...++|++|++|+++|||
T Consensus 73 ~~~i~TK~~~~~~~~~~v~~~~~~SL~rLg~dyiDl~~lH~p~~~-----------------~~~~~~~~l~~l~~~Gki 135 (276)
T 3f7j_A 73 ELFITSKVWNEDQGYETTLAAFEKSLERLQLDYLDLYLIHWPGKD-----------------KYKDTWRALEKLYKDGKI 135 (276)
T ss_dssp GCEEEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEESCCCSS-----------------SHHHHHHHHHHHHHTTSE
T ss_pred cEEEEEeeCCCCCCHHHHHHHHHHHHHHhCCCeeEEEEEecCCCC-----------------cHHHHHHHHHHHHHcCCc
Confidence 999999999888889999999999999999999999999999542 168999999999999999
Q ss_pred eEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCCCCCCCCccChHHHHHHHH
Q 025159 167 KAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTIWGSNRVMECEVLKEIAE 246 (257)
Q Consensus 167 r~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~l~~~~~~~~~~~~~~ia~ 246 (257)
|+||||||++++++++++.+.++|.++|++||++.++.+++++|+++||++++|+||++ |.|. ..+.+.++|+
T Consensus 136 r~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~-G~l~------~~~~l~~ia~ 208 (276)
T 3f7j_A 136 RAIGVSNFQVHHLEELLKDAEIKPMVNQVEFHPRLTQKELRDYCKGQGIQLEAWSPLMQ-GQLL------DNEVLTQIAE 208 (276)
T ss_dssp EEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTGG-GTTT------TCHHHHHHHH
T ss_pred cEEEeccCCHHHHHHHHHhcCCCceeeeeeeccccCCHHHHHHHHHCCCEEEEecCCCC-CccC------CCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999997 8653 4589999999
Q ss_pred HhCCCcccccC
Q 025159 247 AKGKTVAQVLI 257 (257)
Q Consensus 247 ~~~~s~~qval 257 (257)
+||+|++|+||
T Consensus 209 ~~g~t~aqval 219 (276)
T 3f7j_A 209 KHNKSVAQVIL 219 (276)
T ss_dssp HHTCCHHHHHH
T ss_pred HhCCCHHHHHH
Confidence 99999999985
No 5
>3o0k_A Aldo/keto reductase; ssgcid, ALS collaborative crystallography; 1.80A {Brucella melitensis biovar}
Probab=100.00 E-value=4.5e-56 Score=383.53 Aligned_cols=222 Identities=40% Similarity=0.694 Sum_probs=201.9
Q ss_pred cCCCCCCCCCceecCCCCCcCCccceeCCcCCCCChhHHHHHHHHHHHcCCceeeCCCCCCChHHHHHHHHHHHhCCCCC
Q 025159 4 GSEMGSISIPDVPLKSSNRRMPVLGLGTAASPFSGSETTKLAILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGIIK 83 (257)
Q Consensus 4 ~~~~~~~~m~~~~l~~~~~~vs~lglG~~~~~~~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~~lg~~l~~~~~~~~~~ 83 (257)
|.+|.+ +|++++|++| ++||+||||||++ +.+++.++|+.|++.|||+||||+.||+|+.+|++|++. ++
T Consensus 19 p~~~~~-~m~~~~L~~g-~~v~~lglGt~~~---~~~~~~~~v~~Al~~Gi~~~DTA~~Yg~E~~lG~al~~~---~~-- 88 (283)
T 3o0k_A 19 PGSMIM-TVPTVKLNDG-NHIPQLGYGVWQI---SNDEAVSAVSEALKAGYRHIDTATIYGNEEGVGKAINGS---GI-- 88 (283)
T ss_dssp --CEEC-CCCEEECTTS-CEEESBCEECCSC---CHHHHHHHHHHHHHHTCCEEECCGGGSCHHHHHHHHHTS---SS--
T ss_pred CccccC-CCceEECCCC-CEECCeeEECccC---CHHHHHHHHHHHHHcCCCEEECcccccCHHHHHHHHHHc---CC--
Confidence 456665 4999999665 9999999999995 678999999999999999999999999999999999975 65
Q ss_pred CCCcEEEEeccCCCCCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHc
Q 025159 84 SRDELFIASKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNL 163 (257)
Q Consensus 84 ~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 163 (257)
+|+++||+||+|..+.+++.+++++++||++||+||||+|++|||+... ....++|++|++|+++
T Consensus 89 ~R~~~~i~TK~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~---------------~~~~e~~~al~~l~~~ 153 (283)
T 3o0k_A 89 ARADIFLTTKLWNSDQGYESTLKAFDTSLKKLGTDYVDLYLIHWPMPSK---------------DLFMETWRAFIKLKEE 153 (283)
T ss_dssp CGGGCEEEEEECGGGCSHHHHHHHHHHHHHHHTSSCEEEEEECCSCSCH---------------HHHHHHHHHHHHHHHT
T ss_pred CcccEEEEEccCCCCCCHHHHHHHHHHHHHHhCCCceeEEEECCCCCCc---------------ccHHHHHHHHHHHHHC
Confidence 7999999999998888899999999999999999999999999996531 1368999999999999
Q ss_pred CCeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCCCCCCCCccChHHHHH
Q 025159 164 GYTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTIWGSNRVMECEVLKE 243 (257)
Q Consensus 164 G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~l~~~~~~~~~~~~~~ 243 (257)
||||+||||||++++++++++.+.++|.++|++||+++++.+++++|+++||++++|+||++ |.|. ..+.+.+
T Consensus 154 Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~-G~l~------~~~~l~~ 226 (283)
T 3o0k_A 154 GRVKSIGVSNFRTADLERLIKESGVTPVLNQIELHPQFQQDELRLFHGKHDIATEAWSPLGQ-GKLL------EDPTLKS 226 (283)
T ss_dssp TSEEEEEEESCCHHHHHHHHHHHSCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCC-C-CT------TCHHHHH
T ss_pred CCcceEEeccCcHHHHHHHHHhCCCCeEEEEeecCcccCcHHHHHHHHHCCcEEEEecCCCC-Cccc------cchHHHH
Confidence 99999999999999999999998999999999999999999999999999999999999997 8663 4589999
Q ss_pred HHHHhCCCcccccC
Q 025159 244 IAEAKGKTVAQVLI 257 (257)
Q Consensus 244 ia~~~~~s~~qval 257 (257)
+|++||+|++|+||
T Consensus 227 ia~~~g~t~aqvaL 240 (283)
T 3o0k_A 227 IAEKHAKSVAQIIL 240 (283)
T ss_dssp HHHHHTSCHHHHHH
T ss_pred HHHHhCCCHHHHHH
Confidence 99999999999985
No 6
>1afs_A 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, NAD; HET: NAP TES; 2.50A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 1lwi_A*
Probab=100.00 E-value=2.4e-55 Score=386.11 Aligned_cols=244 Identities=38% Similarity=0.651 Sum_probs=210.2
Q ss_pred CCCceecCCCCCcCCccceeCCcCCCCChhHHHHHHHHHHHcCCceeeCCCCCCChHHHHHHHHHHHhCCCCCCCCcEEE
Q 025159 11 SIPDVPLKSSNRRMPVLGLGTAASPFSGSETTKLAILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGIIKSRDELFI 90 (257)
Q Consensus 11 ~m~~~~l~~~~~~vs~lglG~~~~~~~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~~lg~~l~~~~~~~~~~~R~~l~i 90 (257)
.|++++|++| ++||.||||||+++..+.+++.++|+.|++.|||+||||+.||+|+.+|++|++.++++.+ +|+++||
T Consensus 4 ~~~~~~L~tg-~~v~~lglGt~~~g~~~~~~~~~~l~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~g~~-~R~~~~I 81 (323)
T 1afs_A 4 ISLRVALNDG-NFIPVLGFGTTVPEKVAKDEVIKATKIAIDNGFRHFDSAYLYEVEEEVGQAIRSKIEDGTV-KREDIFY 81 (323)
T ss_dssp GGCEEECTTS-CEEESSEEECCCCTTSCTTHHHHHHHHHHHTTCCEEECCTTTTCHHHHHHHHHHHHHTTSC-CGGGCEE
T ss_pred CCceEECCCC-CeECCeeEecccCCCCCHHHHHHHHHHHHHcCCCEEECcccccCHHHHHHHHHHHHhcCCC-ChHHeEE
Confidence 3789999765 9999999999988767888999999999999999999999999999999999987766622 7999999
Q ss_pred EeccCCCCCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCccc---CCCCccHHHHHHHHHHHHHcCCee
Q 025159 91 ASKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKE---DFLPMDFKSVWEAMEECQNLGYTK 167 (257)
Q Consensus 91 ~tK~~~~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~G~ir 167 (257)
+||+|....+++.+++++++||++||+||||+|+||||....+++...|.+.+ ........++|++|++|+++||||
T Consensus 82 ~TK~~~~~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~d~~~~~~~~~~~~~e~~~ale~l~~~Gkir 161 (323)
T 1afs_A 82 TSKLWSTFHRPELVRTCLEKTLKSTQLDYVDLYIIHFPMALQPGDIFFPRDEHGKLLFETVDICDTWEAMEKCKDAGLAK 161 (323)
T ss_dssp EEEECGGGCSTTTHHHHHHHHHHHHCCSSEEEEEESCSCEECSSSSSSCBCTTCCBCEECCCHHHHHHHHHHHHHTTSEE
T ss_pred EEecCCCcCCHHHHHHHHHHHHHHhCCCceeEEEecCcCcCCCCcccCcccccccccccCCCHHHHHHHHHHHHHcCCcC
Confidence 99999877788999999999999999999999999999653222211111000 001235789999999999999999
Q ss_pred EEEecCCCHHHHHHHHHhCCC--CCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCCCCC-----CCCccChHH
Q 025159 168 AIGVSNFSCKKLGDILATAKI--PPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTIWG-----SNRVMECEV 240 (257)
Q Consensus 168 ~iGvs~~~~~~l~~~~~~~~~--~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~l~~-----~~~~~~~~~ 240 (257)
+||||||++++++++++.+.+ +|.++|++||++.++.+++++|+++||++++|+||++ |.|++ ....+..+.
T Consensus 162 ~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~-G~l~~~~~~~~~~~~~~~~ 240 (323)
T 1afs_A 162 SIGVSNFNCRQLERILNKPGLKYKPVCNQVECHLYLNQSKMLDYCKSKDIILVSYCTLGS-SRDKTWVDQKSPVLLDDPV 240 (323)
T ss_dssp EEEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTSC-CCCTTTSCTTSCCGGGCHH
T ss_pred EEEeeCCCHHHHHHHHHhcCcCCCCEEEeeccccccchHHHHHHHHHcCCEEEEecCccC-CccccccccCCcchhcCHH
Confidence 999999999999999999888 9999999999999888999999999999999999998 98753 122455789
Q ss_pred HHHHHHHhCCCcccccC
Q 025159 241 LKEIAEAKGKTVAQVLI 257 (257)
Q Consensus 241 ~~~ia~~~~~s~~qval 257 (257)
+.++|++||+|++|+||
T Consensus 241 l~~ia~~~g~s~aqvaL 257 (323)
T 1afs_A 241 LCAIAKKYKQTPALVAL 257 (323)
T ss_dssp HHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHhCCCHHHHHH
Confidence 99999999999999985
No 7
>1s1p_A Aldo-keto reductase family 1 member C3; TIM-barrel, oxidoreductase; HET: NAP; 1.20A {Homo sapiens} SCOP: c.1.7.1 PDB: 1s1r_A* 1s2a_A* 1s2c_A* 3uwe_A* 3r58_A* 3r43_A* 3r7m_A* 3r6i_A* 3r8h_A* 3r94_A* 3r8g_A* 1zq5_A* 1ry8_A* 1xf0_A* 1ry0_A* 2f38_A* 2fgb_A* 4dbs_A* 4dbu_A* 3gug_A* ...
Probab=100.00 E-value=6.9e-55 Score=384.36 Aligned_cols=243 Identities=40% Similarity=0.641 Sum_probs=209.7
Q ss_pred CCceecCCCCCcCCccceeCCcCCCCChhHHHHHHHHHHHcCCceeeCCCCCCChHHHHHHHHHHHhCCCCCCCCcEEEE
Q 025159 12 IPDVPLKSSNRRMPVLGLGTAASPFSGSETTKLAILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGIIKSRDELFIA 91 (257)
Q Consensus 12 m~~~~l~~~~~~vs~lglG~~~~~~~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~~lg~~l~~~~~~~~~~~R~~l~i~ 91 (257)
+++++|++| ++||.||||||.++..+.+++.++|+.|++.|||+||||+.||+|+.+|++|++.++++.+ +|+++||+
T Consensus 5 ~~~~~L~tg-~~v~~lglGt~~~~~~~~~~~~~~l~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~~~~-~R~~~~I~ 82 (331)
T 1s1p_A 5 QQCVKLNDG-HFMPVLGFGTYAPPEVPRSKALEVTKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSV-KREDIFYT 82 (331)
T ss_dssp -CEEECTTS-CEEESEEEECCCCTTSCTTHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSC-CGGGCEEE
T ss_pred CCeEECCCC-CEeCCeeEcCccCCCCCHHHHHHHHHHHHHcCCCEEEccccccCHHHHHHHHHHHHhcCCC-CchheEEE
Confidence 689999666 9999999999987667888999999999999999999999999999999999987766622 79999999
Q ss_pred eccCCCCCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCccc---CCCCccHHHHHHHHHHHHHcCCeeE
Q 025159 92 SKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKE---DFLPMDFKSVWEAMEECQNLGYTKA 168 (257)
Q Consensus 92 tK~~~~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~G~ir~ 168 (257)
||+|....+++.+++++++||++||+||||+|+||||....+++...|.+.+ ........++|++|++|+++||||+
T Consensus 83 TK~~~~~~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~d~~g~~~~~~~~~~e~~~ale~l~~~Gkir~ 162 (331)
T 1s1p_A 83 SKLWSTFHRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPGEELSPTDENGKVIFDIVDLCTTWEAMEKCKDAGLAKS 162 (331)
T ss_dssp EEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCSSCSSCBCTTSCBCBCCCCHHHHHHHHHHHHHTTSEEE
T ss_pred eccCCccCCHHHHHHHHHHHHHHhCCCcEEEEEeccCcccCCCcccCCccccccccccccCHHHHHHHHHHHHHcCCccE
Confidence 9999877889999999999999999999999999999654332222221110 0112357899999999999999999
Q ss_pred EEecCCCHHHHHHHHHhCCC--CCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCCCCC-----CCCccChHHH
Q 025159 169 IGVSNFSCKKLGDILATAKI--PPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTIWG-----SNRVMECEVL 241 (257)
Q Consensus 169 iGvs~~~~~~l~~~~~~~~~--~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~l~~-----~~~~~~~~~~ 241 (257)
||||||++++++++++.+.+ +|.++|++||++.++.+++++|+++||++++|+||++ |.|++ ....+..+.+
T Consensus 163 iGvSn~~~~~l~~~~~~~~~~~~p~v~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~-G~l~~~~~~~~~~~~~~~~l 241 (331)
T 1s1p_A 163 IGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNRSKLLDFCKSKDIVLVAYSALGS-QRDKRWVDPNSPVLLEDPVL 241 (331)
T ss_dssp EEEESCCHHHHHHHHTCTTCCCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTSC-CCCTTTSCTTSCCGGGCHHH
T ss_pred EEEeCCCHHHHHHHHHhcCccCCCceeeeecCCCcChHHHHHHHHHcCCEEEEeccccC-CcccccccCCCcccccCHHH
Confidence 99999999999999999888 8999999999999888999999999999999999997 98753 1224556899
Q ss_pred HHHHHHhCCCcccccC
Q 025159 242 KEIAEAKGKTVAQVLI 257 (257)
Q Consensus 242 ~~ia~~~~~s~~qval 257 (257)
.++|++||+|++|+||
T Consensus 242 ~~ia~~~g~s~aqvaL 257 (331)
T 1s1p_A 242 CALAKKHKRTPALIAL 257 (331)
T ss_dssp HHHHHHHTSCHHHHHH
T ss_pred HHHHHHhCCCHHHHHH
Confidence 9999999999999985
No 8
>3buv_A 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reductase, catalytic tetrad, hepes, NADP, bIle catabolism, disease mutation, lipid metabolism; HET: NAP EPE; 1.35A {Homo sapiens} PDB: 3bur_A* 3bv7_A* 3caq_A* 3cas_A* 3cav_A* 3g1r_A* 3cot_A* 3dop_A* 3cmf_A* 3uzx_A* 3uzw_A* 3uzy_A* 3uzz_A*
Probab=100.00 E-value=1.1e-54 Score=382.49 Aligned_cols=245 Identities=35% Similarity=0.672 Sum_probs=210.3
Q ss_pred CCCCceecCCCCCcCCccceeCCcCCC-CChhHHHHHHHHHHHcCCceeeCCCCCCChHHHHHHHHHHHhCCCCCCCCcE
Q 025159 10 ISIPDVPLKSSNRRMPVLGLGTAASPF-SGSETTKLAILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGIIKSRDEL 88 (257)
Q Consensus 10 ~~m~~~~l~~~~~~vs~lglG~~~~~~-~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~~lg~~l~~~~~~~~~~~R~~l 88 (257)
..|++++|++| ++||.||||||+++. .+.+++.++|+.|++.|||+||||+.||+|..+|++|++.++++.+ +|+++
T Consensus 5 ~~~~~~~L~tg-~~v~~lglGt~~~g~~~~~~~~~~~l~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~g~~-~R~~~ 82 (326)
T 3buv_A 5 AASHRIPLSDG-NSIPIIGLGTYSEPKSTPKGACATSVKVAIDTGYRHIDGAYIYQNEHEVGEAIREKIAEGKV-RREDI 82 (326)
T ss_dssp SSCCEEECTTS-CEEESBCEECCCCGGGCCTTHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSC-CGGGC
T ss_pred CCCCeEECCCC-CeeCCeeEcccCCCCCCCHHHHHHHHHHHHHcCCCEEECccccCCHHHHHHHHHHHHhcCCC-ChhHe
Confidence 34789999665 999999999999763 5778999999999999999999999999999999999987766622 79999
Q ss_pred EEEeccCCCCCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCccc---CCCCccHHHHHHHHHHHHHcCC
Q 025159 89 FIASKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKE---DFLPMDFKSVWEAMEECQNLGY 165 (257)
Q Consensus 89 ~i~tK~~~~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~G~ 165 (257)
||+||+|....+++.+++++++||++||+||||+|+||||+...+++...|...+ ........++|++|++|+++||
T Consensus 83 ~i~TK~~~~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ale~l~~~Gk 162 (326)
T 3buv_A 83 FYCGKLWATNHVPEMVRPTLERTLRVLQLDYVDLYIIEVPMAFKPGDEIYPRDENGKWLYHKSNLCATWEAMEACKDAGL 162 (326)
T ss_dssp EEEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEESCSCCBCCSSCSSCBCTTCCBCBCCCCHHHHHHHHHHHHHTTS
T ss_pred EEEeeeCCCcCCHHHHHHHHHHHHHHhCCCceeEEEEccCCccCCccccCccccccccccccccHHHHHHHHHHHHHcCC
Confidence 9999999888889999999999999999999999999999764332222221111 0112357899999999999999
Q ss_pred eeEEEecCCCHHHHHHHHHhCCCC--CceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCCCCC-----CCCccCh
Q 025159 166 TKAIGVSNFSCKKLGDILATAKIP--PAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTIWG-----SNRVMEC 238 (257)
Q Consensus 166 ir~iGvs~~~~~~l~~~~~~~~~~--p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~l~~-----~~~~~~~ 238 (257)
||+||||||++++++++++.+.++ |.++|++||++.++.+++++|+++||++++|+||++ |.|+. .+..+..
T Consensus 163 ir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~-G~l~~~~~~~~~~~~~~ 241 (326)
T 3buv_A 163 VKSLGVSNFNRRQLELILNKPGLKHKPVSNQVECHPYFTQPKLLKFCQQHDIVITAYSPLGT-SRNPIWVNVSSPPLLKD 241 (326)
T ss_dssp EEEEEEESCCHHHHHHHHTCTTCCSCCCEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCC-CCCTTTSCTTSCCGGGC
T ss_pred ccEEEEeCCCHHHHHHHHHhCCCCCCCeeeeeecccccCcHHHHHHHHHcCCEEEEeccccC-CccccccccCCcccccc
Confidence 999999999999999999998888 999999999999888999999999999999999998 88741 1224557
Q ss_pred HHHHHHHHHhCCCcccccC
Q 025159 239 EVLKEIAEAKGKTVAQVLI 257 (257)
Q Consensus 239 ~~~~~ia~~~~~s~~qval 257 (257)
+.+.++|++||+|++|+||
T Consensus 242 ~~l~~ia~~~g~s~aqvaL 260 (326)
T 3buv_A 242 ALLNSLGKRYNKTAAQIVL 260 (326)
T ss_dssp HHHHHHHHHHTCCHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHH
Confidence 8999999999999999985
No 9
>3b3e_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.80A {Bacillus subtilis} PDB: 3b3d_A
Probab=100.00 E-value=4.6e-55 Score=381.50 Aligned_cols=220 Identities=42% Similarity=0.729 Sum_probs=203.0
Q ss_pred CCCCCCCCceecCCCCCcCCccceeCCcCCCCChhHHHHHHHHHHHcCCceeeCCCCCCChHHHHHHHHHHHhCCCCCCC
Q 025159 6 EMGSISIPDVPLKSSNRRMPVLGLGTAASPFSGSETTKLAILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGIIKSR 85 (257)
Q Consensus 6 ~~~~~~m~~~~l~~~~~~vs~lglG~~~~~~~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~~lg~~l~~~~~~~~~~~R 85 (257)
+|....|++++|++| ++||+||||||+++ +.+++.++|+.|++.|||+||||+.||+|+.+|++|++. ++ +|
T Consensus 34 ~~~~~~m~~~~L~~g-~~v~~lglGt~~~~--~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~E~~lG~al~~~---~~--~R 105 (310)
T 3b3e_A 34 SMPTSLKDTVKLHNG-VEMPWFGLGVFKVE--NGNEATESVKAAIKNGYRSIDTAAIYKNEEGVGIGIKES---GV--AR 105 (310)
T ss_dssp -CCSSTTCEEECTTS-CEEESBCEECTTCC--TTHHHHHHHHHHHHTTCCEEECCGGGSCHHHHHHHHHHS---SS--CG
T ss_pred cccccccceEECCCC-CeeCceeeeCCcCC--CHHHHHHHHHHHHHcCCCEEECCCccCCHHHHHHHHHhc---CC--Cc
Confidence 455566999999865 99999999999973 568899999999999999999999999999999999985 65 79
Q ss_pred CcEEEEeccCCCCCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCC
Q 025159 86 DELFIASKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGY 165 (257)
Q Consensus 86 ~~l~i~tK~~~~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ 165 (257)
+++||+||+|..+.+++.+++++++||++||+||||+|++|||+.. ..+++|++|++|+++||
T Consensus 106 ~~v~I~TK~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~-----------------~~~e~~~al~~l~~~Gk 168 (310)
T 3b3e_A 106 EELFITSKVWNEDQGYETTLAAFEKSLERLQLDYLDLYLIHWPGKD-----------------KYKDTWRALEKLYKDGK 168 (310)
T ss_dssp GGCEEEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEESCCCSS-----------------CHHHHHHHHHHHHHTTS
T ss_pred ceEEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCeeEEEEeeCCCcc-----------------cHHHHHHHHHHHHHcCC
Confidence 9999999999888889999999999999999999999999999642 16899999999999999
Q ss_pred eeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCCCCCCCCccChHHHHHHH
Q 025159 166 TKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTIWGSNRVMECEVLKEIA 245 (257)
Q Consensus 166 ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~l~~~~~~~~~~~~~~ia 245 (257)
||+||||||++++++++++.+.++|.++|++||++.++.+++++|+++||++++|+||++ |.|. ..+.+.++|
T Consensus 169 ir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~-G~l~------~~~~l~~iA 241 (310)
T 3b3e_A 169 IRAIGVSNFQVHHLEELLKDAEIKPMVNQVEFHPRLTQKELRDYCKGQGIQLEAWSPLMQ-GQLL------DNEVLTQIA 241 (310)
T ss_dssp EEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTGG-GTTT------TCHHHHHHH
T ss_pred cceEeecCCCHHHHHHHHHhcCCCcceeeeeccCccCCHHHHHHHHHcCCEEEEeccccC-CCcC------CCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999997 8663 458999999
Q ss_pred HHhCCCcccccC
Q 025159 246 EAKGKTVAQVLI 257 (257)
Q Consensus 246 ~~~~~s~~qval 257 (257)
++||+|++||||
T Consensus 242 ~~~g~t~aqvaL 253 (310)
T 3b3e_A 242 EKHNKSVAQVIL 253 (310)
T ss_dssp HHHTCCHHHHHH
T ss_pred HHhCCCHHHHHH
Confidence 999999999985
No 10
>4f40_A Prostaglandin F2-alpha synthase/D-arabinose dehyd; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CIT; 1.60A {Leishmania major} PDB: 4g5d_A*
Probab=100.00 E-value=4e-55 Score=378.90 Aligned_cols=230 Identities=37% Similarity=0.652 Sum_probs=202.1
Q ss_pred cCCCCCCCCCceecCCCCCcCCccceeCCcCCCCChhHHHHHHHHHHHcCCceeeCCCCCCChHHHHHHHHHHHhCCCCC
Q 025159 4 GSEMGSISIPDVPLKSSNRRMPVLGLGTAASPFSGSETTKLAILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGIIK 83 (257)
Q Consensus 4 ~~~~~~~~m~~~~l~~~~~~vs~lglG~~~~~~~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~~lg~~l~~~~~~~~~~ 83 (257)
+.+|+....++.+|++| ++||.||||||+++. .+++.++|+.|++.|||+||||+.||+|+.+|++|++. ++
T Consensus 2 ~~~m~~~~~~~~~l~~g-~~v~~lglGt~~~~~--~~~~~~~v~~Al~~G~~~~DTA~~Yg~E~~vG~al~~~---~~-- 73 (288)
T 4f40_A 2 PGSMAGVDKAMVTLSNG-VKMPQFGLGVWQSPA--GEVTENAVKWALCAGYRHIDTAAIYKNEESVGAGLRAS---GV-- 73 (288)
T ss_dssp -----CTTTCEEECTTS-CEEESBCEECTTCCT--THHHHHHHHHHHHTTCCEEECCGGGTCHHHHHHHHHHH---TC--
T ss_pred CCccccccCCeEECCCC-CeecceeEECCcCCC--cHHHHHHHHHHHHcCCCeEECcccccCHHHHHHHHHhc---CC--
Confidence 34677777899999888 999999999999763 58899999999999999999999999999999999987 66
Q ss_pred CCCcEEEEeccCCCCCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHc
Q 025159 84 SRDELFIASKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNL 163 (257)
Q Consensus 84 ~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 163 (257)
+|+++||+||+|..+.+++.+++++++||++||+||||+|++|||+...+. ........++|++|++|+++
T Consensus 74 ~R~~~~I~TK~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~llH~p~~~~~~---------~~~~~~~~e~~~al~~l~~~ 144 (288)
T 4f40_A 74 PREDVFITTKLWNTEQGYESTLAAFEESRQKLGVDYIDLYLIHWPRGKDIL---------SKEGKKYLDSWRAFEQLYKE 144 (288)
T ss_dssp CGGGCEEEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEECCCCCHHHH---------HHHCCHHHHHHHHHHHHHHT
T ss_pred ChhhEEEEEecCCCcCCHHHHHHHHHHHHHHhCCCcEEEEEEecCCCCccc---------ccccccHHHHHHHHHHHHHc
Confidence 799999999999988899999999999999999999999999999642100 00012367999999999999
Q ss_pred CCeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCCCCCCCCccChHHHHH
Q 025159 164 GYTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTIWGSNRVMECEVLKE 243 (257)
Q Consensus 164 G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~l~~~~~~~~~~~~~~ 243 (257)
||||+||||||++++++++++.+.++|.++|++||+++++.+++++|+++||++++|+||++ |.|+ ..+.+.+
T Consensus 145 Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~-G~l~------~~~~l~~ 217 (288)
T 4f40_A 145 KKVRAIGVSNFHIHHLEDVLAMCTVTPMVNQVELHPLNNQADLRAFCDAKQIKVEAWSPLGQ-GKLL------SNPILSA 217 (288)
T ss_dssp TSEEEEEEESCCHHHHHHHHTTCSSCCCEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTC---CGG------GCHHHHH
T ss_pred CCccEEEeccCCHHHHHHHHHhCCCCCeEEeccCccccCCHHHHHHHHHCCCEEEEecCCCC-Cccc------ccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999997 8664 3589999
Q ss_pred HHHHhCCCcccccC
Q 025159 244 IAEAKGKTVAQVLI 257 (257)
Q Consensus 244 ia~~~~~s~~qval 257 (257)
+|++||+|++|+||
T Consensus 218 ia~~~g~t~aqvaL 231 (288)
T 4f40_A 218 IGAKYNKTAAQVIL 231 (288)
T ss_dssp HHHHHTCCHHHHHH
T ss_pred HHHHhCCCHHHHHH
Confidence 99999999999985
No 11
>1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP: c.1.7.1 PDB: 1a80_A* 1m9h_A*
Probab=100.00 E-value=8.4e-55 Score=375.02 Aligned_cols=217 Identities=37% Similarity=0.710 Sum_probs=194.3
Q ss_pred CCceecCCCCCcCCccceeCCcCCCCChhHHHHHHHHHHHcCCceeeCCCCCCChHHHHHHHHHHHhCCCCCCCCcEEEE
Q 025159 12 IPDVPLKSSNRRMPVLGLGTAASPFSGSETTKLAILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGIIKSRDELFIA 91 (257)
Q Consensus 12 m~~~~l~~~~~~vs~lglG~~~~~~~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~~lg~~l~~~~~~~~~~~R~~l~i~ 91 (257)
|++++|++ |++||+||||||+++ .+++.++|+.|++.|||+||||+.||+|+.+|++|++. ++ +|+++||+
T Consensus 3 M~~~~l~~-g~~v~~lglGt~~~~---~~~~~~~l~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~---~~--~R~~~~i~ 73 (278)
T 1hw6_A 3 VPSIVLND-GNSIPQLGYGVFKVP---PADTQRAVEEALEVGYRHIDTAAIYGNEEGVGAAIAAS---GI--ARDDLFIT 73 (278)
T ss_dssp CCEEECTT-SCEEESBCEECCSCC---GGGHHHHHHHHHHHTCCEEECGGGTTCCHHHHHHHHHH---CC--CGGGCEEE
T ss_pred CceEECCC-CCccCCeeEECCcCC---hHHHHHHHHHHHHcCCCEEECcccccCHHHHHHHHHHc---CC--ChhhEEEE
Confidence 78999955 599999999999964 48899999999999999999999999999999999986 66 79999999
Q ss_pred eccCCCCCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEEe
Q 025159 92 SKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGV 171 (257)
Q Consensus 92 tK~~~~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGv 171 (257)
||+|..+.+++.+++++++||++||+||||+|++|||+... ....++|++|++|+++||||+|||
T Consensus 74 TK~~~~~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~~---------------~~~~e~~~al~~l~~~Gkir~iGv 138 (278)
T 1hw6_A 74 TKLWNDRHDGDEPAAAIAESLAKLALDQVDLYLVHWPTPAA---------------DNYVHAWEKMIELRAAGLTRSIGV 138 (278)
T ss_dssp EEECCC-----CHHHHHHHHHHHHTCSCEEEEEECCCCTTC---------------SSHHHHHHHHHHHHHTTSEEEEEE
T ss_pred EeeCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEEcCCCCCC---------------CCHHHHHHHHHHHHHcCCccEEEe
Confidence 99998888899999999999999999999999999996421 237899999999999999999999
Q ss_pred cCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCCCCCCCCccChHHHHHHHHHhCCC
Q 025159 172 SNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTIWGSNRVMECEVLKEIAEAKGKT 251 (257)
Q Consensus 172 s~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~l~~~~~~~~~~~~~~ia~~~~~s 251 (257)
|||++++++++++.+.++|.++|++||+++++.+++++|+++||++++|+||++ |. ..++..+.+.++|++||+|
T Consensus 139 Sn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~-G~----~~~~~~~~l~~ia~~~g~s 213 (278)
T 1hw6_A 139 SNHLVPHLERIVAATGVVPAVNQIELHPAYQQREITDWAAAHDVKIESWGPLGQ-GK----YDLFGAEPVTAAAAAHGKT 213 (278)
T ss_dssp ESCCHHHHHHHHHHHSCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTGG-GS----SCCTTSHHHHHHHHHHTCC
T ss_pred cCCCHHHHHHHHHhcCCCceeEEEEeCcccCCHHHHHHHHHcCCEEEEeccccC-CC----ccccccHHHHHHHHHhCCC
Confidence 999999999999999999999999999999989999999999999999999997 73 1234568999999999999
Q ss_pred cccccC
Q 025159 252 VAQVLI 257 (257)
Q Consensus 252 ~~qval 257 (257)
++|+||
T Consensus 214 ~aqvaL 219 (278)
T 1hw6_A 214 PAQAVL 219 (278)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999985
No 12
>2wzm_A Aldo-keto reductase; oxidoreductase; HET: NA7; 1.64A {Mycobacterium smegmatis} PDB: 2wzt_A
Probab=100.00 E-value=5.4e-55 Score=376.92 Aligned_cols=217 Identities=37% Similarity=0.666 Sum_probs=198.2
Q ss_pred CCCCceecCCCCCcCCccceeCCcCCCCChhHHHHHHHHHHHcCCceeeCCCCCCChHHHHHHHHHHHhCCCCCCCCcEE
Q 025159 10 ISIPDVPLKSSNRRMPVLGLGTAASPFSGSETTKLAILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGIIKSRDELF 89 (257)
Q Consensus 10 ~~m~~~~l~~~~~~vs~lglG~~~~~~~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~~lg~~l~~~~~~~~~~~R~~l~ 89 (257)
..|++++|++ |++||.||||||+++ .+++.++|+.|++.|||+||||+.||+|+.+|++|++. ++ +|+++|
T Consensus 9 ~~m~~~~l~~-g~~v~~lglGt~~~~---~~~~~~~v~~Al~~Gi~~iDTA~~Yg~E~~lG~al~~~---~~--~R~~v~ 79 (283)
T 2wzm_A 9 AAIPTVTLND-DNTLPVVGIGVGELS---DSEAERSVSAALEAGYRLIDTAAAYGNEAAVGRAIAAS---GI--PRDEIY 79 (283)
T ss_dssp -CCCEEECTT-SCEEESEEEECTTCC---HHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHT---CC--CGGGCE
T ss_pred CCCceEECCC-CCEEcceeEECCCCC---hHHHHHHHHHHHHcCCCEEECCCcccCHHHHHHHHHhc---CC--CcccEE
Confidence 4499999954 599999999999964 48899999999999999999999999999999999975 65 799999
Q ss_pred EEeccCCCCCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEE
Q 025159 90 IASKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAI 169 (257)
Q Consensus 90 i~tK~~~~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~i 169 (257)
|+||+|..+.+++.+++++++||++||+||||+|++|||+.. .....++|++|++|+++||||+|
T Consensus 80 i~TK~~~~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~---------------~~~~~e~~~al~~l~~~Gkir~i 144 (283)
T 2wzm_A 80 VTTKLATPDQGFTSSQAAARASLERLGLDYVDLYLIHWPGGD---------------TSKYVDSWGGLMKVKEDGIARSI 144 (283)
T ss_dssp EEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEECCCTTC---------------HHHHHHHHHHHHHHHHTTSEEEE
T ss_pred EEeccCCCCCCHHHHHHHHHHHHHHhCCCCEeEEEEcCCCCC---------------CCCHHHHHHHHHHHHHcCCccEE
Confidence 999999888889999999999999999999999999999642 01367999999999999999999
Q ss_pred EecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCCCCCCCCccChHHHHHHHHHhC
Q 025159 170 GVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTIWGSNRVMECEVLKEIAEAKG 249 (257)
Q Consensus 170 Gvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~l~~~~~~~~~~~~~~ia~~~~ 249 (257)
|||||++++++++++.+.++|.++|++||+++++.+++++|+++||++++|+||++ |.+ +..+.+.++|++||
T Consensus 145 GvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~-G~l------~~~~~l~~ia~~~g 217 (283)
T 2wzm_A 145 GVCNFGAEDLETIVSLTYFTPAVNQIELHPLLNQAALREVNAGYNIVTEAYGPLGV-GRL------LDHPAVTAIAEAHG 217 (283)
T ss_dssp EEESCCHHHHHHHHHHHCCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEECTTTT-TGG------GGCHHHHHHHHHHT
T ss_pred EEcCCCHHHHHHHHHhcCCCcccccccCCcccCCHHHHHHHHHCCCEEEEecCCCC-Ccc------cchHHHHHHHHHhC
Confidence 99999999999999999999999999999999988999999999999999999997 743 34689999999999
Q ss_pred CCcccccC
Q 025159 250 KTVAQVLI 257 (257)
Q Consensus 250 ~s~~qval 257 (257)
+|++|+||
T Consensus 218 ~s~aqvaL 225 (283)
T 2wzm_A 218 RTAAQVLL 225 (283)
T ss_dssp CCHHHHHH
T ss_pred CCHHHHHH
Confidence 99999985
No 13
>1vbj_A Prostaglandin F synthase; TIM barrel, oxidoreductase; HET: NAP CIT; 2.10A {Trypanosoma brucei}
Probab=100.00 E-value=7e-55 Score=375.87 Aligned_cols=217 Identities=41% Similarity=0.716 Sum_probs=199.6
Q ss_pred CCCCCceecCCCCCcCCccceeCCcCCCCChhHHHHHHHHHHHcCCceeeCCCCCCChHHHHHHHHHHHhCCCCCCCCcE
Q 025159 9 SISIPDVPLKSSNRRMPVLGLGTAASPFSGSETTKLAILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGIIKSRDEL 88 (257)
Q Consensus 9 ~~~m~~~~l~~~~~~vs~lglG~~~~~~~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~~lg~~l~~~~~~~~~~~R~~l 88 (257)
|..|++++|++| ++||+||||||+++ +.+++.++|+.|++.|||+||||+.||+|+.+|++|++. ++ +|+++
T Consensus 6 ~~~m~~~~l~~g-~~v~~lglGt~~~~--~~~~~~~~v~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~---~~--~R~~~ 77 (281)
T 1vbj_A 6 MALTQSLKLSNG-VMMPVLGFGMWKLQ--DGNEAETATMWAIKSGYRHIDTAAIYKNEESAGRAIASC---GV--PREEL 77 (281)
T ss_dssp TCCCCEEECTTS-CEEESBCEECTTCC--TTHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHS---SS--CGGGC
T ss_pred CCCCceEECCCC-CeecCeeEECCcCC--CHHHHHHHHHHHHHcCCCEEECCcccCCHHHHHHHHHhc---CC--ChhHE
Confidence 456999999655 99999999999974 458899999999999999999999999999999999975 55 79999
Q ss_pred EEEeccCCCCCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeE
Q 025159 89 FIASKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKA 168 (257)
Q Consensus 89 ~i~tK~~~~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~ 168 (257)
||+||+|..+.+++.+++++++||++||+||||+|++|||+ .. ...++|++|++|+++||||+
T Consensus 78 ~i~TK~~~~~~~~~~v~~~~~~SL~rL~~dyiDl~~lH~p~-~~----------------~~~~~~~al~~l~~~Gkir~ 140 (281)
T 1vbj_A 78 FVTTKLWNSDQGYESTLSAFEKSIKKLGLEYVDLYLIHWPG-KD----------------KFIDTWKAFEKLYADKKVRA 140 (281)
T ss_dssp EEEEEECGGGCSHHHHHHHHHHHHHHHTCSCBSEEEESCCC-SS----------------CHHHHHHHHHHHHHTTSBSC
T ss_pred EEEeccCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEcCCC-CC----------------CHHHHHHHHHHHHHCCCccE
Confidence 99999998888899999999999999999999999999996 22 27899999999999999999
Q ss_pred EEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCCCCCCCCccChHHHHHHHHHh
Q 025159 169 IGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTIWGSNRVMECEVLKEIAEAK 248 (257)
Q Consensus 169 iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~l~~~~~~~~~~~~~~ia~~~ 248 (257)
||||||++++++++++.+.++|.++|++||+++++.+++++|+++||++++|+||++ |.+ +..+.+.++|++|
T Consensus 141 iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~-G~~------~~~~~l~~ia~~~ 213 (281)
T 1vbj_A 141 IGVSNFHEHHIEELLKHCKVAPMVNQIELHPLLNQKALCEYCKSKNIAVTAWSPLGQ-GHL------VEDARLKAIGGKY 213 (281)
T ss_dssp EEEESCCHHHHHHHHTSCSSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTGG-GTT------TTCHHHHHHHHTT
T ss_pred EEeeCCCHHHHHHHHHhCCCCceeeeEEeccccCCHHHHHHHHHcCCEEEEecCCcC-CCC------CCCHHHHHHHHHh
Confidence 999999999999999999999999999999999988999999999999999999997 742 3468999999999
Q ss_pred CCCcccccC
Q 025159 249 GKTVAQVLI 257 (257)
Q Consensus 249 ~~s~~qval 257 (257)
|+|++|+||
T Consensus 214 g~s~aqvaL 222 (281)
T 1vbj_A 214 GKTAAQVML 222 (281)
T ss_dssp TCCHHHHHH
T ss_pred CCCHHHHHH
Confidence 999999985
No 14
>1mi3_A Xylose reductase, XR; aldo-keto reductase, beta-alpha barrel, dimer, oxidoreductase; HET: NAD; 1.80A {Candida tenuis} SCOP: c.1.7.1 PDB: 1jez_A* 1k8c_A* 1ye6_A* 1ye4_A* 1sm9_A* 1r38_A* 1z9a_A*
Probab=100.00 E-value=1.8e-54 Score=380.50 Aligned_cols=242 Identities=36% Similarity=0.604 Sum_probs=206.6
Q ss_pred CCCCceecCCCCCcCCccceeCCcCCCCChhHHHHHHHHHHHcCCceeeCCCCCCChHHHHHHHHHHHhCCCCCCCCcEE
Q 025159 10 ISIPDVPLKSSNRRMPVLGLGTAASPFSGSETTKLAILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGIIKSRDELF 89 (257)
Q Consensus 10 ~~m~~~~l~~~~~~vs~lglG~~~~~~~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~~lg~~l~~~~~~~~~~~R~~l~ 89 (257)
..|++++|++| ++||.||||||+ .+.+++.++|+.|++.|||+||||+.||+|+.+|++|++.++.+.+ +|+++|
T Consensus 3 ~~m~~~~L~tg-~~v~~lglGt~~---~~~~~~~~~v~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~g~~-~R~~~~ 77 (322)
T 1mi3_A 3 ASIPDIKLSSG-HLMPSIGFGCWK---LANATAGEQVYQAIKAGYRLFDGAEDYGNEKEVGDGVKRAIDEGLV-KREEIF 77 (322)
T ss_dssp -CCCEEECTTS-CEEESBCEECTT---CCHHHHHHHHHHHHHTTCCEEECCGGGSCHHHHHHHHHHHHHTTSC-CGGGCE
T ss_pred CCCceEECCCC-CEECCeeeeCCc---CCHHHHHHHHHHHHHcCCCEEEccccccCHHHHHHHHHHHhhcCCC-ChhhEE
Confidence 44899999655 999999999998 5789999999999999999999999999999999999987766622 799999
Q ss_pred EEeccCCCCCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCC--CCCCCCCCcc----cC---CCCccHHHHHHHHHHH
Q 025159 90 IASKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSK--PGSYEFPIKK----ED---FLPMDFKSVWEAMEEC 160 (257)
Q Consensus 90 i~tK~~~~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~--~~~~~~~~~~----~~---~~~~~~~~~~~~l~~l 160 (257)
|+||+|....+++.+++++++||++||+||||+|+||||.... +++...|.+. +. ......+++|++|++|
T Consensus 78 i~TK~~~~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~e~~~al~~l 157 (322)
T 1mi3_A 78 LTSKLWNNYHDPKNVETALNKTLADLKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFVYEDVPILETWKALEKL 157 (322)
T ss_dssp EEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCCCTTTCSSCTTCCSSTTCCCBCCCCHHHHHHHHHHH
T ss_pred EEEeeCCCCCCHHHHHHHHHHHHHHhCCCCeeeEEEecCcccccCcccccccccccccccccccccCCCHHHHHHHHHHH
Confidence 9999998888899999999999999999999999999996532 1111111100 00 0123578999999999
Q ss_pred HHcCCeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCCCC--------CC
Q 025159 161 QNLGYTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTIW--------GS 232 (257)
Q Consensus 161 ~~~G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~l~--------~~ 232 (257)
+++||||+||||||++++++++++.+.++|.++|++||++.++.+++++|+++||++++|+||++ |.+. +.
T Consensus 158 ~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~-G~~~~~~~~~~~~~ 236 (322)
T 1mi3_A 158 VAAGKIKSIGVSNFPGALLLDLLRGATIKPAVLQVEHHPYLQQPKLIEFAQKAGVTITAYSSFGP-QSFVEMNQGRALNT 236 (322)
T ss_dssp HHTTSEEEEEEESCCHHHHHHHHHHCSSCCCEEEEECBTTBCCHHHHHHHHHTTCEEEEECTTTT-HHHHTTTCHHHHTS
T ss_pred HHcCCcCEEEEcCCCHHHHHHHHHhCCCCceEeecccCcCcCcHHHHHHHHHcCCEEEEECCCCC-CCcccccccccccC
Confidence 99999999999999999999999999999999999999999889999999999999999999997 7321 12
Q ss_pred CCccChHHHHHHHHHhCCCcccccC
Q 025159 233 NRVMECEVLKEIAEAKGKTVAQVLI 257 (257)
Q Consensus 233 ~~~~~~~~~~~ia~~~~~s~~qval 257 (257)
...+..+.+.++|++||+|++|+||
T Consensus 237 ~~~~~~~~l~~iA~~~g~t~aqvaL 261 (322)
T 1mi3_A 237 PTLFAHDTIKAIAAKYNKTPAEVLL 261 (322)
T ss_dssp CCTTSCHHHHHHHHHHTCCHHHHHH
T ss_pred cccccCHHHHHHHHHcCCCHHHHHH
Confidence 2345679999999999999999985
No 15
>3o3r_A Aldo-keto reductase family 1, member B7; aldose reductase like protein, AKR1B14, oxidoreductase; HET: NAP; 1.86A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 3qkz_A*
Probab=100.00 E-value=3.7e-54 Score=377.53 Aligned_cols=240 Identities=40% Similarity=0.669 Sum_probs=207.6
Q ss_pred CCceecCCCCCcCCccceeCCcCCCCChhHHHHHHHHHHHcCCceeeCCCCCCChHHHHHHHHHHHhCCCCCCCCcEEEE
Q 025159 12 IPDVPLKSSNRRMPVLGLGTAASPFSGSETTKLAILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGIIKSRDELFIA 91 (257)
Q Consensus 12 m~~~~l~~~~~~vs~lglG~~~~~~~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~~lg~~l~~~~~~~~~~~R~~l~i~ 91 (257)
|++++|++| ++||.||||||+ .+.+++.++|+.|++.|||+||||+.||+|+.+|++|++.+.++.+ +|+++||+
T Consensus 2 ~~~~~l~tg-~~v~~lglGt~~---~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~E~~lG~al~~~~~~~~~-~R~~v~I~ 76 (316)
T 3o3r_A 2 TTFVKLRTK-AKMPLVGLGTWK---SPPGQVKEAVKAAIDAGYRHFDCAYVYQNESEVGEAIQEKIKEKAV-RREDLFIV 76 (316)
T ss_dssp CCEEECTTS-CEEESBEEBCTT---CCTTHHHHHHHHHHHTTCCEEECCGGGSCHHHHHHHHHHHHHTTSC-CGGGCEEE
T ss_pred CCeEECCCC-CEeCCeeeECCc---CCcHHHHHHHHHHHHcCCCEEEccCccCCHHHHHHHHHHHHhhCCC-ChHHcEEE
Confidence 578899888 999999999998 4668999999999999999999999999999999999987766533 79999999
Q ss_pred eccCCCCCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccC---CCCccHHHHHHHHHHHHHcCCeeE
Q 025159 92 SKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKED---FLPMDFKSVWEAMEECQNLGYTKA 168 (257)
Q Consensus 92 tK~~~~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~l~~~G~ir~ 168 (257)
||+|+...+++.+++++++||++||+||||+|+||||+...+++...|...+. ......+++|++|++|+++||||+
T Consensus 77 TK~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~al~~l~~~Gkir~ 156 (316)
T 3o3r_A 77 SKLWSTFFEKSLMKEAFQKTLSDLKLDYLDLYLIHWPQGLQAGKEFLPKDSQGKVLMSKSTFLDAWEGMEELVDQGLVKA 156 (316)
T ss_dssp EEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEESCSSCBCCSSCSSCBCTTSCBCBCSCCHHHHHHHHHHHHHTTSEEE
T ss_pred eeeCCCcCCHHHHHHHHHHHHHHcCCCeeeEEEEcCCccccCcccccccccccccccccccHHHHHHHHHHHHHcCCCcE
Confidence 99998888899999999999999999999999999998655443333322111 134568899999999999999999
Q ss_pred EEecCCCHHHHHHHHHhCCC--CCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCCCC----CCCCccChHHHH
Q 025159 169 IGVSNFSCKKLGDILATAKI--PPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTIW----GSNRVMECEVLK 242 (257)
Q Consensus 169 iGvs~~~~~~l~~~~~~~~~--~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~l~----~~~~~~~~~~~~ 242 (257)
||||||++++++++++.+.+ +|.++|++||++.++.+++++|+++||++++|+||++ |... .....+..+.+.
T Consensus 157 iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~-G~~~~~~~~~~~~~~~~~l~ 235 (316)
T 3o3r_A 157 LGVSNFNHFQIERLLNKPGLKHKPVTNQVECHPYLTQEKLIQYCHSKGIAVIAYSPLGS-PDRPYAKPEDPVVLEIPKIK 235 (316)
T ss_dssp EEEESCCHHHHHHHHTCTTCCSCCCEEEEECBTTBCCHHHHHHHHTTTCEEEEECTTCC-TTCTTCCTTSCCSTTCHHHH
T ss_pred EEEecCCHHHHHHHHHhCCCCCCceEeeccCCcccchHHHHHHHHHcCCEEEEecccCC-CCCccccccchhhhcCHHHH
Confidence 99999999999999998765 4999999999999989999999999999999999997 6321 112345568999
Q ss_pred HHHHHhCCCcccccC
Q 025159 243 EIAEAKGKTVAQVLI 257 (257)
Q Consensus 243 ~ia~~~~~s~~qval 257 (257)
++|++||+|++||||
T Consensus 236 ~ia~~~g~t~aqvaL 250 (316)
T 3o3r_A 236 EIAAKHKKTIAQVLI 250 (316)
T ss_dssp HHHHHHTCCHHHHHH
T ss_pred HHHHHhCCCHHHHHH
Confidence 999999999999985
No 16
>1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1
Probab=100.00 E-value=1.2e-54 Score=380.67 Aligned_cols=233 Identities=34% Similarity=0.572 Sum_probs=204.2
Q ss_pred CCceecCCCCCcCCccceeCCcCCCCChhHHHHHHHHHHHcCCceeeCCCCCCChHHHHHHHHHHHhCCCCCCCCcEEEE
Q 025159 12 IPDVPLKSSNRRMPVLGLGTAASPFSGSETTKLAILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGIIKSRDELFIA 91 (257)
Q Consensus 12 m~~~~l~~~~~~vs~lglG~~~~~~~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~~lg~~l~~~~~~~~~~~R~~l~i~ 91 (257)
+++++|++| ++||+||||||+ .+.+++.++|+.|++.|||+||||+.||+|+.+|++|++.++.+.+ +|+++||+
T Consensus 5 ~~~~~l~~g-~~vs~lglGt~~---~~~~~~~~~v~~Al~~Gi~~~DTA~~Yg~E~~vG~al~~~~~~~~~-~R~~~~i~ 79 (317)
T 1qwk_A 5 TASIKLSNG-VEMPVIGLGTWQ---SSPAEVITAVKTAVKAGYRLIDTASVYQNEEAIGTAIKELLEEGVV-KREELFIT 79 (317)
T ss_dssp CCEEECTTS-CEEESBCEECTT---CCHHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHHTSC-CGGGCEEE
T ss_pred cceEECCCC-CEeCCeeEECCc---CCHHHHHHHHHHHHHcCCCEEEccccccCHHHHHHHHHHHhhcCCC-ChhheEEE
Confidence 588999765 999999999998 5778999999999999999999999999999999999986655522 79999999
Q ss_pred eccCCCCCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEEe
Q 025159 92 SKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGV 171 (257)
Q Consensus 92 tK~~~~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGv 171 (257)
||+|....+++.+++++++||++||+||||+|+||||+...++. +.+......++|++|++|+++||||+|||
T Consensus 80 TK~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~-------~~~~~~~~~e~~~al~~l~~~Gkir~iGv 152 (317)
T 1qwk_A 80 TKAWTHELAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAFNDDM-------SEHIASPVEDVWRQFDAVYKAGLAKAVGV 152 (317)
T ss_dssp EEECTTTSSTTTHHHHHHHHHHHHTCSCBSEEEESCSCEECTTS-------CSEECCCHHHHHHHHHHHHHTTSBSSEEE
T ss_pred eeeCCCcCCHHHHHHHHHHHHHHhCCCceeEEEEeccCcccccc-------ccccCCCHHHHHHHHHHHHHcCCeeEEEe
Confidence 99998888899999999999999999999999999996532211 00112347899999999999999999999
Q ss_pred cCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCCCCC-------------CCCccCh
Q 025159 172 SNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTIWG-------------SNRVMEC 238 (257)
Q Consensus 172 s~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~l~~-------------~~~~~~~ 238 (257)
|||++++++++++.+.++|+++|++||+++++.+++++|+++||++++|+||++ |.|+. ....+..
T Consensus 153 Sn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~-G~l~~~~~~~~~~~~~~~~~~~~~~ 231 (317)
T 1qwk_A 153 SNWNNDQISRALALGLTPVHNSQVELHLYFPQHDHVDFCKKHNISVTSYATLGS-PGRVNFTLPTGQKLDWAPAPSDLQD 231 (317)
T ss_dssp ESCCHHHHHHHHTTCSSCCCEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCS-CCEECCBCTTCCBCCCEECSSGGGC
T ss_pred cCCCHHHHHHHHHhcCCccceecceeccccCcHHHHHHHHHcCCEEEEecCccC-CCcccccccccccccccccchhhcc
Confidence 999999999999999999999999999999889999999999999999999997 86531 1223456
Q ss_pred HHHHHHHHHhCCCcccccC
Q 025159 239 EVLKEIAEAKGKTVAQVLI 257 (257)
Q Consensus 239 ~~~~~ia~~~~~s~~qval 257 (257)
+.+.++|++||+|++|+||
T Consensus 232 ~~l~~ia~~~g~s~aqvaL 250 (317)
T 1qwk_A 232 QNVLALAEKTHKTPAQVLL 250 (317)
T ss_dssp HHHHHHHHHHTCCHHHHHH
T ss_pred HHHHHHHHHHCcCHHHHHH
Confidence 8999999999999999985
No 17
>1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT; 0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A* 1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A* 2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A* 2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ...
Probab=100.00 E-value=4.8e-54 Score=376.81 Aligned_cols=240 Identities=41% Similarity=0.685 Sum_probs=206.7
Q ss_pred CCceecCCCCCcCCccceeCCcCCCCChhHHHHHHHHHHHcCCceeeCCCCCCChHHHHHHHHHHHhCCCCCCCCcEEEE
Q 025159 12 IPDVPLKSSNRRMPVLGLGTAASPFSGSETTKLAILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGIIKSRDELFIA 91 (257)
Q Consensus 12 m~~~~l~~~~~~vs~lglG~~~~~~~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~~lg~~l~~~~~~~~~~~R~~l~i~ 91 (257)
+++++|++| ++||+||||||+ .+.+++.++|+.|++.|||+||||+.||+|+.+|++|++.++.+.+ +|+++||+
T Consensus 2 ~~~~~l~tg-~~v~~lglGt~~---~~~~~~~~~l~~Al~~G~~~iDTA~~Yg~E~~vG~al~~~~~~g~~-~R~~~~I~ 76 (316)
T 1us0_A 2 ASRILLNNG-AKMPILGLGTWK---SPPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQEKLREQVV-KREELFIV 76 (316)
T ss_dssp CSEEECTTS-CEEESBCEECTT---CCHHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSS-CGGGCEEE
T ss_pred CceEECCCC-CEECCEeEECCc---CCHHHHHHHHHHHHHcCCCEEEcccccCCHHHHHHHHHHHHhcCCC-ChhHeEEE
Confidence 457899666 999999999998 5788999999999999999999999999999999999987766622 79999999
Q ss_pred eccCCCCCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccC---CCCccHHHHHHHHHHHHHcCCeeE
Q 025159 92 SKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKED---FLPMDFKSVWEAMEECQNLGYTKA 168 (257)
Q Consensus 92 tK~~~~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~l~~~G~ir~ 168 (257)
||+|....+++.+++++++||++||+||||+|+||||+...+++...|...+. .......++|++|++|+++||||+
T Consensus 77 TK~~~~~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ale~l~~~Gkir~ 156 (316)
T 1us0_A 77 SKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKA 156 (316)
T ss_dssp EEECGGGCSHHHHHHHHHHHHHHHTCSCBSEEEESSSCCBCCSSCSSCBCTTSCBCBCSCCHHHHHHHHHHHHHTTSBSC
T ss_pred EeeCCCcCCHHHHHHHHHHHHHHhCCCceeeEEEecCccccccccccccccccccccccccHHHHHHHHHHHHHCCCccE
Confidence 99998888899999999999999999999999999997643322211111110 112357899999999999999999
Q ss_pred EEecCCCHHHHHHHHHhCCC--CCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCCCC----CCCCccChHHHH
Q 025159 169 IGVSNFSCKKLGDILATAKI--PPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTIW----GSNRVMECEVLK 242 (257)
Q Consensus 169 iGvs~~~~~~l~~~~~~~~~--~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~l~----~~~~~~~~~~~~ 242 (257)
||||||++++++++++.+.+ +|.++|++||+++++.+++++|+++||++++|+||++ |.+. +....+..+.+.
T Consensus 157 iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~-G~l~~~~~~~~~~~~~~~l~ 235 (316)
T 1us0_A 157 IGISNFNHLQVEMILNKPGLKYKPAVNQIECHPYLTQEKLIQYCQSKGIVVTAYSPLGS-PDRPWAKPEDPSLLEDPRIK 235 (316)
T ss_dssp EEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCC-TTCTTCCTTSCCTTTCHHHH
T ss_pred EEEecCCHHHHHHHHHhCcccCCceeeehhcCCccCCHHHHHHHHHcCCEEEEeccccc-CccccccCCCcccccCHHHH
Confidence 99999999999999999888 9999999999999888999999999999999999997 8652 112345678999
Q ss_pred HHHHHhCCCcccccC
Q 025159 243 EIAEAKGKTVAQVLI 257 (257)
Q Consensus 243 ~ia~~~~~s~~qval 257 (257)
++|++||+|++|+||
T Consensus 236 ~ia~~~g~s~aqvaL 250 (316)
T 1us0_A 236 AIAAKHNKTTAQVLI 250 (316)
T ss_dssp HHHHHHTCCHHHHHH
T ss_pred HHHHHhCCCHHHHHH
Confidence 999999999999985
No 18
>3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc, PSI-biology, structural genomics; 1.96A {Sinorhizobium meliloti}
Probab=100.00 E-value=8e-55 Score=378.06 Aligned_cols=216 Identities=30% Similarity=0.556 Sum_probs=201.2
Q ss_pred CCCCCceecCCCCCcCCccceeCCcCCCCChhHHHHHHHHHHHcCCceeeCCCCCCChHHHHHHHHHHHhCCCCCCCCcE
Q 025159 9 SISIPDVPLKSSNRRMPVLGLGTAASPFSGSETTKLAILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGIIKSRDEL 88 (257)
Q Consensus 9 ~~~m~~~~l~~~~~~vs~lglG~~~~~~~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~~lg~~l~~~~~~~~~~~R~~l 88 (257)
+..|++++|+ | ++||.||||||++ +.+++.++|+.|++.|||+||||+.||+|+.+|++|++. ++ +|+++
T Consensus 21 ~~~m~~~~l~-g-~~v~~lglGt~~~---~~~~~~~~v~~Al~~Gi~~~DTA~~Yg~E~~lG~al~~~---~~--~R~~v 90 (298)
T 3up8_A 21 QSMMHAVSSN-G-ANIPALGFGTFRM---SGAEVLRILPQALKLGFRHVDTAQIYGNEAEVGEAIQKS---GI--PRADV 90 (298)
T ss_dssp GGSCCEECCT-T-CCEESEEEECTTC---CHHHHHHHHHHHHHHTCCEEECCTTTTCHHHHHHHHHHH---TC--CGGGC
T ss_pred hccCceEEeC-C-eecCCeeEECCcC---CHHHHHHHHHHHHHcCCCEEECCCcccCHHHHHHHHHHc---CC--ChHHE
Confidence 3448999999 5 9999999999995 568999999999999999999999999999999999987 76 79999
Q ss_pred EEEeccCCCCCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeE
Q 025159 89 FIASKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKA 168 (257)
Q Consensus 89 ~i~tK~~~~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~ 168 (257)
||+||+|..+.+++.+++++++||++||+||||+|+||||+... ..+++|++|++|+++||||+
T Consensus 91 ~I~TK~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~~~----------------~~~e~~~al~~l~~~Gkir~ 154 (298)
T 3up8_A 91 FLTTKVWVDNYRHDAFIASVDESLRKLRTDHVDLLLLHWPGSDV----------------PMAERIGALNEVRNAGKVRH 154 (298)
T ss_dssp EEEEEECGGGCSHHHHHHHHHHHHHHHTSSCEEEEEESCSCCSS----------------CHHHHHHHHHHHHHTTSEEE
T ss_pred EEEeccCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEccCCCCC----------------CHHHHHHHHHHHHHcCCccE
Confidence 99999998888999999999999999999999999999997643 37899999999999999999
Q ss_pred EEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCCCCCCCCccChHHHHHHHHHh
Q 025159 169 IGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTIWGSNRVMECEVLKEIAEAK 248 (257)
Q Consensus 169 iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~l~~~~~~~~~~~~~~ia~~~ 248 (257)
||||||++++++++++.++++|.++|++||+++++.+++++|+++||++++|+||++ |.+ +..+.+.++|++|
T Consensus 155 iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~-G~l------~~~~~l~~ia~~~ 227 (298)
T 3up8_A 155 IGISNFNTTQMEEAARLSDAPIATNQVEYHPYLDQTKVLQTARRLGMSLTSYYAMAN-GKV------PADPLLTEIGGRH 227 (298)
T ss_dssp EEEESCCHHHHHHHHHHCSSCEEEEEEECBTTBCCHHHHHHHHHHTCEEEEECTTGG-GHH------HHCHHHHHHHHHH
T ss_pred EEEcCCCHHHHHHHHHhCCCCceEEEEecccccccHHHHHHHHHCCCEEEEECCCcC-Ccc------cccchHHHHHHHc
Confidence 999999999999999999899999999999999999999999999999999999997 754 3458999999999
Q ss_pred CCCcccccC
Q 025159 249 GKTVAQVLI 257 (257)
Q Consensus 249 ~~s~~qval 257 (257)
|+|++|+||
T Consensus 228 g~s~aqvaL 236 (298)
T 3up8_A 228 GKTAAQVAL 236 (298)
T ss_dssp TCCHHHHHH
T ss_pred CCCHHHHHH
Confidence 999999985
No 19
>3h7r_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.40A {Arabidopsis thaliana}
Probab=100.00 E-value=9.6e-55 Score=383.13 Aligned_cols=240 Identities=44% Similarity=0.752 Sum_probs=206.1
Q ss_pred CCCCCCCCceecCCCCCcCCccceeCCcCCCCChhHHHHHHHHHHHcCCceeeCCCCCCChHHHHHHHHHHHhCCCCCCC
Q 025159 6 EMGSISIPDVPLKSSNRRMPVLGLGTAASPFSGSETTKLAILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGIIKSR 85 (257)
Q Consensus 6 ~~~~~~m~~~~l~~~~~~vs~lglG~~~~~~~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~~lg~~l~~~~~~~~~~~R 85 (257)
.|++ +|++++|++| ++||+||||||+ ++.++|+.|++.|||+||||+.||+|+.+|++|++.+.++.+ +|
T Consensus 20 ~~~~-~m~~~~L~tg-~~vs~lglGt~~-------~~~~~v~~Al~~Gi~~~DTA~~YgsE~~lG~al~~~~~~g~~-~R 89 (331)
T 3h7r_A 20 HMAA-PIRFFELNTG-AKLPCVGLGTYA-------MVATAIEQAIKIGYRHIDCASIYGNEKEIGGVLKKLIGDGFV-KR 89 (331)
T ss_dssp ------CCEEECTTS-CEEESBEEECTT-------CCHHHHHHHHHHTCCEEECCGGGSCHHHHHHHHHHHHHTTSS-CG
T ss_pred eccc-CCcEEECCCC-CEecCEeeccHH-------HHHHHHHHHHHcCCCEEECccccCCHHHHHHHHHHHhhcCCC-Cc
Confidence 4444 5999999766 999999999997 578999999999999999999999999999999998766643 79
Q ss_pred CcEEEEeccCCCCCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCC
Q 025159 86 DELFIASKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGY 165 (257)
Q Consensus 86 ~~l~i~tK~~~~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ 165 (257)
+++||+||+|..+.+++.+++++++||++||+||||+|+||||+...++. ..| ..+.......+++|++|++|+++||
T Consensus 90 ~~v~I~TK~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~-~~~-~~~~~~~~~~~e~~~aL~~l~~~Gk 167 (331)
T 3h7r_A 90 EELFITSKLWSNDHLPEDVPKALEKTLQDLQIDYVDLYLIHWPASLKKES-LMP-TPEMLTKPDITSTWKAMEALYDSGK 167 (331)
T ss_dssp GGCEEEEEECGGGCSTTHHHHHHHHHHHHHTCSCBSEEEECCSCEECTTC-SSC-CGGGEECCCHHHHHHHHHHHHHTTS
T ss_pred hhEEEEEeeCCCCCCHHHHHHHHHHHHHHcCCCeeEEEEEecCccccccc-ccc-cccccccCCHHHHHHHHHHHHHcCC
Confidence 99999999998888899999999999999999999999999997644322 112 1111223458999999999999999
Q ss_pred eeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCCCCCCCCccChHHHHHHH
Q 025159 166 TKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTIWGSNRVMECEVLKEIA 245 (257)
Q Consensus 166 ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~l~~~~~~~~~~~~~~ia 245 (257)
||+||||||++++++++++.+.++|.++|++||+++++.+++++|+++||++++|+||+++|..+++...+..+.+.++|
T Consensus 168 ir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~g~~~~~~~~~~~~~~l~~iA 247 (331)
T 3h7r_A 168 ARAIGVSNFSSKKLTDLLNVARVTPAVNQVECHPVWQQQGLHELCKSKGVHLSGYSPLGSQSKGEVRLKVLQNPIVTEVA 247 (331)
T ss_dssp BSSEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTSCSCTTTTTHHHHTCHHHHHHH
T ss_pred CcEEEecCCCHHHHHHHHHhcCCCceeEEeecccccCCHHHHHHHHHCCCEEEEeCCCCCCCCCCCccchhcCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998634444444456679999999
Q ss_pred HHhCCCcccccC
Q 025159 246 EAKGKTVAQVLI 257 (257)
Q Consensus 246 ~~~~~s~~qval 257 (257)
+++|+|++|+||
T Consensus 248 ~~~g~t~aqvaL 259 (331)
T 3h7r_A 248 EKLGKTTAQVAL 259 (331)
T ss_dssp HHHTCCHHHHHH
T ss_pred HHHCcCHHHHHH
Confidence 999999999985
No 20
>1mzr_A 2,5-diketo-D-gluconate reductase A; alpha/beta-barrel, aldo-ketoreductase, NADPH dependant, BACT targets at IGS-CNRS, france, BIGS; 2.13A {Escherichia coli} SCOP: c.1.7.1
Probab=100.00 E-value=4.1e-54 Score=373.25 Aligned_cols=221 Identities=38% Similarity=0.669 Sum_probs=198.1
Q ss_pred CCCCCCCCceecCCCCCcCCccceeCCcCCCCChhHHHHHHHHHHHcCCceeeCCCCCCChHHHHHHHHHHHhCCCCCCC
Q 025159 6 EMGSISIPDVPLKSSNRRMPVLGLGTAASPFSGSETTKLAILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGIIKSR 85 (257)
Q Consensus 6 ~~~~~~m~~~~l~~~~~~vs~lglG~~~~~~~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~~lg~~l~~~~~~~~~~~R 85 (257)
.+....|++++|++| ++||+||||||++ +.+++.++|+.|++.|||+||||+.||+|+.+|++|++. ++ +|
T Consensus 19 ~~~~~~~~~~~L~tg-~~vs~lglGt~~~---~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~E~~vG~al~~~---~~--~R 89 (296)
T 1mzr_A 19 KAGLANPTVIKLQDG-NVMPQLGLGVWQA---SNEEVITAIQKALEVGYRSIDTAAAYKNEEGVGKALKNA---SV--NR 89 (296)
T ss_dssp ----CCCCEEECTTS-CEEESBCEECCSC---CHHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHS---CS--CG
T ss_pred hhcCCCCceEECCCC-CeeCCEeEECCCC---CHHHHHHHHHHHHHcCCCEEECCccccCHHHHHHHHHhc---CC--Cc
Confidence 344567999999765 9999999999995 468899999999999999999999999999999999974 55 79
Q ss_pred CcEEEEeccCCCCCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCC
Q 025159 86 DELFIASKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGY 165 (257)
Q Consensus 86 ~~l~i~tK~~~~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ 165 (257)
+++||+||+|..+. +.+++++++||++||+||||+|++|||+... ....++|++|++|+++||
T Consensus 90 ~~v~I~TK~~~~~~--~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~---------------~~~~e~~~al~~l~~~Gk 152 (296)
T 1mzr_A 90 EELFITTKLWNDDH--KRPREALLDSLKKLQLDYIDLYLMHWPVPAI---------------DHYVEAWKGMIELQKEGL 152 (296)
T ss_dssp GGCEEEEEECGGGT--TCHHHHHHHHHHHHTCSCEEEEEESCCCTTT---------------CCHHHHHHHHHHHHHTTS
T ss_pred ccEEEEeccCCCcH--HHHHHHHHHHHHHhCCCcEEEEEEccCCCCc---------------CCHHHHHHHHHHHHHCCC
Confidence 99999999987655 8999999999999999999999999996420 237899999999999999
Q ss_pred eeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCCCCCCCCccChHHHHHHH
Q 025159 166 TKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTIWGSNRVMECEVLKEIA 245 (257)
Q Consensus 166 ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~l~~~~~~~~~~~~~~ia 245 (257)
||+||||||++++++++++.+.++|.++|++||+++++.+++++|+++||++++|+||++ |.+ .++..+.+.++|
T Consensus 153 ir~iGvSn~~~~~l~~~~~~~~~~p~v~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~-G~~----~~l~~~~l~~ia 227 (296)
T 1mzr_A 153 IKSIGVCNFQIHHLQRLIDETGVTPVINQIELHPLMQQRQLHAWNATHKIQTESWSPLAQ-GGK----GVFDQKVIRDLA 227 (296)
T ss_dssp EEEEEEESCCHHHHHHHHHHHSCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTTT-TCT----TTTTSHHHHHHH
T ss_pred cCEEEEeCCCHHHHHHHHHhcCCCceEEeeecccccCCHHHHHHHHHCCCeEEEeccccC-Ccc----hhcChHHHHHHH
Confidence 999999999999999999988899999999999999988999999999999999999997 743 244568999999
Q ss_pred HHhCCCcccccC
Q 025159 246 EAKGKTVAQVLI 257 (257)
Q Consensus 246 ~~~~~s~~qval 257 (257)
+++|+|++|+||
T Consensus 228 ~~~g~s~aqvaL 239 (296)
T 1mzr_A 228 DKYGKTPAQIVI 239 (296)
T ss_dssp HHHTCCHHHHHH
T ss_pred HHhCCCHHHHHH
Confidence 999999999985
No 21
>4gie_A Prostaglandin F synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: NAP; 1.25A {Trypanosoma cruzi} PDB: 4fzi_A*
Probab=100.00 E-value=6.9e-54 Score=371.43 Aligned_cols=221 Identities=43% Similarity=0.723 Sum_probs=204.6
Q ss_pred CCCCCCCceecCCCCCcCCccceeCCcCCCCChhHHHHHHHHHHHcCCceeeCCCCCCChHHHHHHHHHHHhCCCCCCCC
Q 025159 7 MGSISIPDVPLKSSNRRMPVLGLGTAASPFSGSETTKLAILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGIIKSRD 86 (257)
Q Consensus 7 ~~~~~m~~~~l~~~~~~vs~lglG~~~~~~~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~~lg~~l~~~~~~~~~~~R~ 86 (257)
|+. .|++++|++| ++||.||||||+++ +.+++.++|+.|++.|||+||||+.||||+.+|++++.. +. +|+
T Consensus 9 m~~-~~~~v~Ln~G-~~ip~lGlGtw~~~--d~~e~~~~v~~Al~~Gin~~DTA~~YgsE~~vG~~l~~~---~~--~r~ 79 (290)
T 4gie_A 9 MNC-NYNCVTLHNS-VRMPQLGLGVWRAQ--DGAETANAVRWAIEAGYRHIDTAYIYSNERGVGQGIRES---GV--PRE 79 (290)
T ss_dssp CSS-SSCEEECTTS-CEEESBCEECTTCC--TTHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHH---CC--CGG
T ss_pred cCC-CCCEEEcCCC-CCccceeEECCCCC--CHHHHHHHHHHHHHcCCCEEecccccCCHHHHHHHHHhc---CC--cch
Confidence 544 4999999887 99999999999864 567899999999999999999999999999999999987 76 899
Q ss_pred cEEEEeccCCCCCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe
Q 025159 87 ELFIASKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT 166 (257)
Q Consensus 87 ~l~i~tK~~~~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i 166 (257)
+++|+||++....+++.+++++++||++||+||||+|+||||+.. ...++|++|++|+++|||
T Consensus 80 ~~~i~tk~~~~~~~~~~~~~~~e~SL~rL~~dyiDly~lH~p~~~-----------------~~~e~~~al~~l~~~Gki 142 (290)
T 4gie_A 80 EVWVTTKVWNSDQGYEKTLAAFERSRELLGLEYIDLYLIHWPGKK-----------------KFVDTWKALEKLYEEKKV 142 (290)
T ss_dssp GSEEEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEECCCCSS-----------------SHHHHHHHHHHHHHTTSE
T ss_pred hccccccccccCCChHHHHHHHHHHHHHhCCCceeeEEecCCCCC-----------------cchHHHHHHHHHHHCCCc
Confidence 999999999988899999999999999999999999999998542 367999999999999999
Q ss_pred eEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCCCCCCCCccChHHHHHHHH
Q 025159 167 KAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTIWGSNRVMECEVLKEIAE 246 (257)
Q Consensus 167 r~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~l~~~~~~~~~~~~~~ia~ 246 (257)
|+||||||+++++.++.+.+.++|.++|+++++...+.+++++|+++||++++|+||++ |.+++. ...+.+.++|+
T Consensus 143 r~iGvSn~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~l~~~~~~~gi~~~a~spl~~-G~l~~~---~~~~~l~~iA~ 218 (290)
T 4gie_A 143 RAIGVSNFEPHHLTELFKSCKIRPMVNQVELHPLFQQRTLREFCKQHNIAITAWSPLGS-GEEAGI---LKNHVLGEIAK 218 (290)
T ss_dssp EEEEEESCCHHHHHHHHTTCSSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCS-SGGGCG---GGCHHHHHHHH
T ss_pred ceeeecCCCHHHHHHHHHhccCCCceeeEeccccchhHHHHHHHHHcCceEeeeccccc-cccccc---chhHHHHHHHH
Confidence 99999999999999999999999999999999999899999999999999999999998 987543 34589999999
Q ss_pred HhCCCcccccC
Q 025159 247 AKGKTVAQVLI 257 (257)
Q Consensus 247 ~~~~s~~qval 257 (257)
+||+|++|+||
T Consensus 219 ~~g~t~aqvaL 229 (290)
T 4gie_A 219 KHNKSPAQVVI 229 (290)
T ss_dssp HHTCCHHHHHH
T ss_pred HhCCCHHHHHH
Confidence 99999999985
No 22
>3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, oxidoreductase, S genomics; HET: NAP; 1.75A {Giardia lamblia}
Probab=100.00 E-value=1.7e-53 Score=375.89 Aligned_cols=233 Identities=35% Similarity=0.623 Sum_probs=202.8
Q ss_pred CCCCcCCccceeCCcCCCCChhHHHHHHHHHHHcCCceeeCCCCCCChHHHHHHHHHHHhC---CCCCCCCcEEEEeccC
Q 025159 19 SSNRRMPVLGLGTAASPFSGSETTKLAILEAMKLGYRHFDTATLYQTEQPLGDAIAEALST---GIIKSRDELFIASKLW 95 (257)
Q Consensus 19 ~~~~~vs~lglG~~~~~~~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~~lg~~l~~~~~~---~~~~~R~~l~i~tK~~ 95 (257)
++|.+||.||||||+ .+.+++.++|+.|++.|||+||||+.||+|+.+|++|++.++. ++ +|+++||+||+|
T Consensus 20 ~tg~~vp~lGlGt~~---~~~~~~~~~v~~Al~~Gi~~~DTA~~YgsE~~vG~al~~~~~~~~~g~--~R~~v~I~TK~~ 94 (334)
T 3krb_A 20 GSMQYPPRLGFGTWQ---APPEAVQTAVETALMTGYRHIDCAYVYQNEEAIGRAFGKIFKDASSGI--KREDVWITSKLW 94 (334)
T ss_dssp -CCSSCCSBCEECTT---CCHHHHHHHHHHHHHHTCCEEECCGGGSCHHHHHHHHHHHHHCTTSSC--CGGGCEEEEEEC
T ss_pred CCCCccCCeeeeCCC---CCHHHHHHHHHHHHHcCCCEEECcccccCHHHHHHHHHHHhhhccCCC--ChhhEEEEeeeC
Confidence 335999999999999 5789999999999999999999999999999999999988877 75 899999999999
Q ss_pred CCCCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCC--CCCCCCCCcc---cCCCCccHHHHHHHHHHHHHcCCeeEEE
Q 025159 96 CSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSK--PGSYEFPIKK---EDFLPMDFKSVWEAMEECQNLGYTKAIG 170 (257)
Q Consensus 96 ~~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~--~~~~~~~~~~---~~~~~~~~~~~~~~l~~l~~~G~ir~iG 170 (257)
..+.+++.+++++++||++||+||||+|+||||.... ++....|.+. ........+++|++|++|+++||||+||
T Consensus 95 ~~~~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~d~~g~~~~~~~~~~e~~~al~~l~~~Gkir~iG 174 (334)
T 3krb_A 95 NYNHRPELVREQCKKTMSDLQVDYLDLFLVHWPLAFVRNDVGDLFPKDAEGRAMLEKVPLADTWRAMEQLVEEGLVKHIG 174 (334)
T ss_dssp GGGCSGGGHHHHHHHHHHHHTCSCEEEEEECCSCCBCCCTTCCSSCBCTTSCBCBCCCCHHHHHHHHHHHHHHTSEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCceeEEEEccccccccccccccCcccccccccccCCCHHHHHHHHHHHHHcCCccEEE
Confidence 8888999999999999999999999999999996543 2222222111 1122356889999999999999999999
Q ss_pred ecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCCCCCCC-------CccChHHHHH
Q 025159 171 VSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTIWGSN-------RVMECEVLKE 243 (257)
Q Consensus 171 vs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~l~~~~-------~~~~~~~~~~ 243 (257)
||||++++++++++.+.++|.++|++||+++++.+++++|+++||++++|+||++ |+|+++. ..+..+.+.+
T Consensus 175 vSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~c~~~gI~v~ayspL~~-G~L~~~~~~~~~~~~~~~~~~l~~ 253 (334)
T 3krb_A 175 VSNYTVPLLADLLNYAKIKPLVNQIEIHPWHPNDATVKFCLDNGIGVTAYSPMGG-SYADPRDPSGTQKNVILECKTLKA 253 (334)
T ss_dssp EESCCHHHHHHHHHHCSSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCC-SBC-------CCBCGGGGCHHHHH
T ss_pred EecCCHHHHHHHHHhCCCceEEeeeecCcccccHHHHHHHHHcCCEEEEEecCCC-CcccCCCCCCCcccchhccHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998 9987542 3455799999
Q ss_pred HHHHhCCCcccccC
Q 025159 244 IAEAKGKTVAQVLI 257 (257)
Q Consensus 244 ia~~~~~s~~qval 257 (257)
+|++||+|++||||
T Consensus 254 iA~~~g~s~aqvaL 267 (334)
T 3krb_A 254 IADAKGTSPHCVAL 267 (334)
T ss_dssp HHHHHTSCHHHHHH
T ss_pred HHHHhCcCHHHhHH
Confidence 99999999999985
No 23
>3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR, AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans} SCOP: c.1.7.0
Probab=100.00 E-value=2.7e-53 Score=376.57 Aligned_cols=225 Identities=26% Similarity=0.411 Sum_probs=197.8
Q ss_pred ccCCCCCCCCCceecCCCCCcCCccceeCCcCCC-----CChhHHHHHHHHHHHcCCceeeCCCCCC---ChHHHHHHHH
Q 025159 3 QGSEMGSISIPDVPLKSSNRRMPVLGLGTAASPF-----SGSETTKLAILEAMKLGYRHFDTATLYQ---TEQPLGDAIA 74 (257)
Q Consensus 3 ~~~~~~~~~m~~~~l~~~~~~vs~lglG~~~~~~-----~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg---~e~~lg~~l~ 74 (257)
+++.|. |++++||++|++||+||||||+++. .+.+++.++|+.|++.|||+||||+.|| ||+.+|++|+
T Consensus 13 ~~~~m~---M~~~~lg~tg~~vs~lglGt~~~g~~~~g~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~ 89 (348)
T 3n2t_A 13 RGSHMA---SDTIRIPGIDTPLSRVALGTWAIGGWMWGGPDDDNGVRTIHAALDEGINLIDTAPVYGFGHSEEIVGRALA 89 (348)
T ss_dssp ----CT---TSEECCTTCSSCEESEEEECTTSSCSSSCSTTHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHH
T ss_pred CCCCCC---ceeeecCCCCCccCCEeEeCccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEChhhcCCChHHHHHHHHHh
Confidence 455664 8999999888999999999999863 5788999999999999999999999998 8999999998
Q ss_pred HHHhCCCCCCCCcEEEEecc---C--CC--------CCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCc
Q 025159 75 EALSTGIIKSRDELFIASKL---W--CS--------DAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIK 141 (257)
Q Consensus 75 ~~~~~~~~~~R~~l~i~tK~---~--~~--------~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~ 141 (257)
. .|+++||+||+ | .. +.+++.+++++++||++||+||||+|+||||+...+
T Consensus 90 ~--------~R~~v~I~TK~g~~~~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~-------- 153 (348)
T 3n2t_A 90 E--------KPNKAHVATKLGLHWVGEDEKNMKVFRDSRPARIRKEVEDSLRRLRVETIDLEQIHWPDDKTP-------- 153 (348)
T ss_dssp H--------SCCCCEEEEEECEEEESSSTTTCEEEECCCHHHHHHHHHHHHHHHTCSSEEEEEESSCCTTSC--------
T ss_pred h--------CCCeEEEEEeecCCCcCCCcccccccCCCCHHHHHHHHHHHHHHhCCCcEEEEEecCCCCCCC--------
Confidence 3 59999999999 4 11 258899999999999999999999999999976433
Q ss_pred ccCCCCccHHHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCc--HHHHHHHHHCCceEEE
Q 025159 142 KEDFLPMDFKSVWEAMEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQ--NKLREFCKAKDIQLAA 219 (257)
Q Consensus 142 ~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~--~~~~~~~~~~gi~v~~ 219 (257)
.+++|++|++|+++||||+||||||++++++++++.+ +|+++|++||++++. .+++++|+++||++++
T Consensus 154 --------~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~--~~~~~Q~~~nl~~~~~e~~l~~~~~~~gi~v~a 223 (348)
T 3n2t_A 154 --------IDESARELQKLHQDGKIRALGVSNFSPEQMDIFREVA--PLATIQPPLNLFERTIEKDILPYAEKHNAVVLA 223 (348)
T ss_dssp --------HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHS--CCCEEECBCBTTBCGGGGTHHHHHHHHTCEEEE
T ss_pred --------HHHHHHHHHHHHHhCcceEEecCCCCHHHHHHHHHhC--CccEEEeeecCccCchHHHHHHHHHHcCCeEEE
Confidence 8899999999999999999999999999999999987 578999999999874 7899999999999999
Q ss_pred ecCCCCCCCCCCCCCcc---------------C----------hHHHHHHHHHhCCCcccccC
Q 025159 220 YAPLGARGTIWGSNRVM---------------E----------CEVLKEIAEAKGKTVAQVLI 257 (257)
Q Consensus 220 ~~pl~~~G~l~~~~~~~---------------~----------~~~~~~ia~~~~~s~~qval 257 (257)
|+||++ |+|+++.... . .+.+.++|+++|+|++|+||
T Consensus 224 ~spL~~-G~Ltg~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~iA~~~g~t~aqvaL 285 (348)
T 3n2t_A 224 YGALCR-GLLTGKMNRDTTFPKDDLRSNDPKFQKPNFEKYLAAMDEFEKLAEKRGKSVMAFAV 285 (348)
T ss_dssp BCTTGG-GGGGTCCCTTCCCCTTSGGGGCGGGSTTHHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred eecccC-ccccCCccCCCCCCCcchhhcccccchhhHHHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 999997 9998653211 1 15899999999999999985
No 24
>1ur3_M Hypothetical oxidoreductase YDHF; NADP binding, aldo-keto reductase; 2.57A {Escherichia coli} SCOP: c.1.7.1 PDB: 1og6_A*
Probab=100.00 E-value=1.7e-53 Score=373.58 Aligned_cols=227 Identities=22% Similarity=0.269 Sum_probs=200.7
Q ss_pred CCCCCceecCCCCCcCCccceeCCcCCC--CChhHHHHHHHHHHHcCCceeeCCCCCC---ChHHHHHHHHHHHhCCCCC
Q 025159 9 SISIPDVPLKSSNRRMPVLGLGTAASPF--SGSETTKLAILEAMKLGYRHFDTATLYQ---TEQPLGDAIAEALSTGIIK 83 (257)
Q Consensus 9 ~~~m~~~~l~~~~~~vs~lglG~~~~~~--~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg---~e~~lg~~l~~~~~~~~~~ 83 (257)
..+|++++|++++++||+||||||+++. .+.+++.++|+.|++.|||+||||+.|| ||+.+|++|++. +.
T Consensus 20 ~~~M~~~~Lg~~~~~vs~lglGt~~~g~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~---~~-- 94 (319)
T 1ur3_M 20 AGLVQRITIAPQGPEFSRFVMGYWRLMDWNMSARQLVSFIEEHLDLGVTTVDHADIYGGYQCEAAFGEALKLA---PH-- 94 (319)
T ss_dssp --CCCEEECSTTCCEEESSEEECTTTTTTTCCHHHHHHHHHHHHHHTCCEEECCSSTTTTTHHHHHHHHHHHC---GG--
T ss_pred hhhCceEECCCCCcccccccEeccccCCCCCCHHHHHHHHHHHHHcCCCeEEcccccCCCcHHHHHHHHHHhC---CC--
Confidence 3448999999998899999999999874 5788999999999999999999999999 899999999974 44
Q ss_pred CCCcEEEEeccCCC------------CCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHH
Q 025159 84 SRDELFIASKLWCS------------DAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFK 151 (257)
Q Consensus 84 ~R~~l~i~tK~~~~------------~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~ 151 (257)
+|+++||+||++.. +.+++.+++++++||++||+||||+|++|||+...+ .+
T Consensus 95 ~R~~v~I~TK~~~~~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~----------------~~ 158 (319)
T 1ur3_M 95 LRERMEIVSKCGIATTAREENVIGHYITDRDHIIKSAEQSLINLATDHLDLLLIHRPDPLMD----------------AD 158 (319)
T ss_dssp GTTTCEEEEEECEECTTSTTCSSCEECCCHHHHHHHHHHHHHHHTCSCBSEEEECSCCTTCC----------------HH
T ss_pred CCCeEEEEEeeccCCCCCcccccccCCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCCCC----------------HH
Confidence 69999999999641 467899999999999999999999999999965433 78
Q ss_pred HHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCc---HHHHHHHHHCCceEEEecCCCCCCC
Q 025159 152 SVWEAMEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQ---NKLREFCKAKDIQLAAYAPLGARGT 228 (257)
Q Consensus 152 ~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~---~~~~~~~~~~gi~v~~~~pl~~~G~ 228 (257)
++|++|++|+++||||+||||||++++++++.+.++.+|.++|++||+++++ .+++++|+++||++++|+||++ |.
T Consensus 159 e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~ll~~~~~~gi~v~a~spL~~-G~ 237 (319)
T 1ur3_M 159 EVADAFKHLHQSGKVRHFGVSNFTPAQFALLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGG-GR 237 (319)
T ss_dssp HHHHHHHHHHHTTSBCCEEEESCCHHHHHHHHTTCSSCCCCEEEECBTTBCGGGTSSHHHHHHHHTCCCEEECCCTT-TC
T ss_pred HHHHHHHHHHHCCCccEEEecCCCHHHHHHHHHhcCCCcEEEEccCchhhCchhhHHHHHHHHHcCCeEEEeccccC-cc
Confidence 9999999999999999999999999999999998888999999999999886 3599999999999999999997 88
Q ss_pred CCCCC-CccChHHHHHHHHHhCCCc-ccccC
Q 025159 229 IWGSN-RVMECEVLKEIAEAKGKTV-AQVLI 257 (257)
Q Consensus 229 l~~~~-~~~~~~~~~~ia~~~~~s~-~qval 257 (257)
|+... .....+.+.++|+++|+|+ +|+||
T Consensus 238 L~~~~~~~~~~~~l~~ia~~~g~t~~aqvaL 268 (319)
T 1ur3_M 238 LFNDDYFQPLRDELAVVAEELNAGSIEQVVN 268 (319)
T ss_dssp SSSCGGGHHHHHHHHHHHHHTTCSCHHHHHH
T ss_pred ccCCchhHHHHHHHHHHHHHcCCChHHHHHH
Confidence 75421 1112488999999999999 99985
No 25
>2bgs_A Aldose reductase; holoenzyme, aldo/keto reductase, oxidoreductase; HET: NDP; 1.64A {Hordeum vulgare} PDB: 2bgq_A* 2vdg_A*
Probab=100.00 E-value=8e-53 Score=372.28 Aligned_cols=233 Identities=42% Similarity=0.739 Sum_probs=202.0
Q ss_pred C-CceecCCCCCcCCccceeCCcCCCCChhHHHHHHHHHHH-cCCceeeCCCCCCChHHHHHHHHHHHhCCCCCCCCcEE
Q 025159 12 I-PDVPLKSSNRRMPVLGLGTAASPFSGSETTKLAILEAMK-LGYRHFDTATLYQTEQPLGDAIAEALSTGIIKSRDELF 89 (257)
Q Consensus 12 m-~~~~l~~~~~~vs~lglG~~~~~~~~~~~~~~~l~~Al~-~Gi~~~DtA~~Yg~e~~lg~~l~~~~~~~~~~~R~~l~ 89 (257)
| ++++|++| ++||.||||||+ .+ +++.++|+.|++ .|||+||||+.||+|+.+|++|++.++.++ +|+++|
T Consensus 36 m~~~~~L~tg-~~vp~lglGt~~---~~-~~~~~~l~~Al~~~Gi~~iDTA~~Yg~E~~vG~al~~~~~~g~--~R~~v~ 108 (344)
T 2bgs_A 36 EQDHFVLKSG-HAMPAVGLGTWR---AG-SDTAHSVRTAITEAGYRHVDTAAEYGVEKEVGKGLKAAMEAGI--DRKDLF 108 (344)
T ss_dssp -CCEEECTTS-CEEESBCEECTT---CG-GGHHHHHHHHHHTTCCCEEECCGGGTCHHHHHHHHHHHHHTTC--CGGGCE
T ss_pred CCceEECCCC-CccCCeeEeCCC---Cc-HHHHHHHHHHHHhcCCCEEECCCccCCHHHHHHHHHHhhhcCC--CcccEE
Confidence 5 58899766 999999999998 45 889999999999 999999999999999999999998776675 899999
Q ss_pred EEeccCCCCCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEE
Q 025159 90 IASKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAI 169 (257)
Q Consensus 90 i~tK~~~~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~i 169 (257)
|+||+|....+++.+++++++||++||+||||+|+||||+...+++...|.. +........++|++|++|+++||||+|
T Consensus 109 I~TK~~~~~~~~~~v~~ale~SL~rLg~dyIDl~llH~p~~~~~~~~~~~~~-~~~~~~~~~e~~~aLe~l~~~GkIr~i 187 (344)
T 2bgs_A 109 VTSKIWCTNLAPERVRPALENTLKDLQLDYIDLYHIHWPFRLKDGAHMPPEA-GEVLEFDMEGVWKEMENLVKDGLVKDI 187 (344)
T ss_dssp EEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEESSSCEECTTCCSSCCT-TCEECCCHHHHHHHHHHHHHTTSEEEE
T ss_pred EEeccCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEEecCCcccccccccccc-ccccCCCHHHHHHHHHHHHHcCCccEE
Confidence 9999998778899999999999999999999999999996432211111100 001123578999999999999999999
Q ss_pred EecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCCCCCCCCccChHHHHHHHHHhC
Q 025159 170 GVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTIWGSNRVMECEVLKEIAEAKG 249 (257)
Q Consensus 170 Gvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~l~~~~~~~~~~~~~~ia~~~~ 249 (257)
|||||++++++++++.+.++|.++|++||++.++.+++++|+++||++++|+||++ |. ...+..+.+.++|+++|
T Consensus 188 GvSn~~~~~l~~~~~~~~i~p~v~Q~e~~~~~~~~~ll~~~~~~gI~v~a~spL~~-G~----~~~~~~~~l~~iA~~~g 262 (344)
T 2bgs_A 188 GVCNYTVTKLNRLLRSAKIPPAVCQMEMHPGWKNDKIFEACKKHGIHITAYSPLGS-SE----KNLAHDPVVEKVANKLN 262 (344)
T ss_dssp EEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCT-TT----TCCTTCHHHHHHHHHHT
T ss_pred EEecCCHHHHHHHHHhcCCCceeeecccCcccCcHHHHHHHHHCCCEEEEeCcccC-CC----chhhccHHHHHHHHHhC
Confidence 99999999999999999999999999999999888999999999999999999997 61 23445789999999999
Q ss_pred CCcccccC
Q 025159 250 KTVAQVLI 257 (257)
Q Consensus 250 ~s~~qval 257 (257)
+|++|+||
T Consensus 263 ~s~aqvaL 270 (344)
T 2bgs_A 263 KTPGQVLI 270 (344)
T ss_dssp CCHHHHHH
T ss_pred CCHHHHHH
Confidence 99999985
No 26
>1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics, joint center for structural genomics, PSI, protein structure initiative; HET: NAP; 2.40A {Thermotoga maritima} SCOP: c.1.7.1
Probab=100.00 E-value=4.4e-53 Score=367.11 Aligned_cols=218 Identities=43% Similarity=0.693 Sum_probs=197.1
Q ss_pred CceecCCCCCcCCccceeCCcCCCCChhHHHHHHHHHHHcCCceeeCCCCCCChHHHHHHHHHHHhCCCCCCCCcEEEEe
Q 025159 13 PDVPLKSSNRRMPVLGLGTAASPFSGSETTKLAILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGIIKSRDELFIAS 92 (257)
Q Consensus 13 ~~~~l~~~~~~vs~lglG~~~~~~~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~~lg~~l~~~~~~~~~~~R~~l~i~t 92 (257)
+.+.++++|++||.||||||++ ..+++.++|+.|++.|||+||||+.||+|+.+|++|++.++++.+ +|+++||+|
T Consensus 15 ~~~~~~~tg~~v~~lglGt~~~---~~~~~~~~v~~Al~~Gi~~~DTA~~Yg~E~~vG~al~~~~~~~~~-~R~~v~I~T 90 (298)
T 1vp5_A 15 VPKVTLNNGVEMPILGYGVFQI---PPEKTEECVYEAIKVGYRLIDTAASYMNEEGVGRAIKRAIDEGIV-RREELFVTT 90 (298)
T ss_dssp CCEEECTTSCEEESBCEECTTC---CHHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHTTSC-CGGGCEEEE
T ss_pred CceEeCCCCCCccCeeEeCCcC---ChHHHHHHHHHHHHcCCCEEECCCcccCHHHHHHHHHHhhhccCC-ChhhEEEEe
Confidence 3455666679999999999995 458899999999999999999999999999999999986554332 799999999
Q ss_pred ccCCCCCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEEec
Q 025159 93 KLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGVS 172 (257)
Q Consensus 93 K~~~~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs 172 (257)
|+|..+.+++.+++++++||++||+||||+|++|||+. ...++|++|++|+++||||+||||
T Consensus 91 K~~~~~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~------------------~~~e~~~al~~l~~~Gkir~iGvS 152 (298)
T 1vp5_A 91 KLWVSDVGYESTKKAFEKSLKKLQLEYIDLYLIHQPFG------------------DVHCAWKAMEEMYKDGLVRAIGVS 152 (298)
T ss_dssp EECGGGCSSHHHHHHHHHHHHHHTCSCEEEEEECSSCS------------------CHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred ccCCCCCCHHHHHHHHHHHHHHHCCCcEEEEEecCCCC------------------CHHHHHHHHHHHHHcCCccEEEec
Confidence 99987788899999999999999999999999999953 278999999999999999999999
Q ss_pred CCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCCCCCCCCccChHHHHHHHHHhCCCc
Q 025159 173 NFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTIWGSNRVMECEVLKEIAEAKGKTV 252 (257)
Q Consensus 173 ~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~l~~~~~~~~~~~~~~ia~~~~~s~ 252 (257)
||++++++++++.+.++|.++|++||+++++.+++++|+++||++++|+||++ |. ..++..+.+.++|+++|+|+
T Consensus 153 n~~~~~l~~~~~~~~~~p~v~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~-G~----~~~l~~~~l~~ia~~~g~s~ 227 (298)
T 1vp5_A 153 NFYPDRLMDLMVHHEIVPAVNQIEIHPFYQRQEEIEFMRNYNIQPEAWGPFAE-GR----KNIFQNGVLRSIAEKYGKTV 227 (298)
T ss_dssp SCCHHHHHHHHHHCSSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTGG-GG----GGGGGCHHHHHHHHHHTCCH
T ss_pred CCCHHHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHCCCEEEEeccccc-CC----ccccCcHHHHHHHHHhCCCH
Confidence 99999999999999999999999999999988999999999999999999997 73 12345689999999999999
Q ss_pred ccccC
Q 025159 253 AQVLI 257 (257)
Q Consensus 253 ~qval 257 (257)
+|+||
T Consensus 228 aqvaL 232 (298)
T 1vp5_A 228 AQVIL 232 (298)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99985
No 27
>3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone, NADPH, cytoplasm, ION transport, ionic channel, NADP, phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A* 3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A*
Probab=100.00 E-value=3.5e-53 Score=373.01 Aligned_cols=225 Identities=29% Similarity=0.395 Sum_probs=198.7
Q ss_pred CCCceecCCCCCcCCccceeCC-cCCC-CChhHHHHHHHHHHHcCCceeeCCCCCC---ChHHHHHHHHHHHhCCCCCCC
Q 025159 11 SIPDVPLKSSNRRMPVLGLGTA-ASPF-SGSETTKLAILEAMKLGYRHFDTATLYQ---TEQPLGDAIAEALSTGIIKSR 85 (257)
Q Consensus 11 ~m~~~~l~~~~~~vs~lglG~~-~~~~-~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg---~e~~lg~~l~~~~~~~~~~~R 85 (257)
.|.||+||++|++||+|||||| .+|. .+.+++.++|+.|++.|||+||||+.|| +|+.+|++|++. +. +|
T Consensus 2 ~m~yr~lG~tg~~vs~iglGt~~~~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~---~~--~R 76 (327)
T 3eau_A 2 LQFYRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKK---GW--RR 76 (327)
T ss_dssp CCSEEESTTSSCEEESEEEECTTCCCCCSCHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHH---TC--CG
T ss_pred cchhcccCCCCCcccceeecCccccCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCChHHHHHHHHHhc---CC--cc
Confidence 3889999999999999999997 5553 6788999999999999999999999997 499999999987 66 79
Q ss_pred CcEEEEeccCCC-------CCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHH
Q 025159 86 DELFIASKLWCS-------DAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAME 158 (257)
Q Consensus 86 ~~l~i~tK~~~~-------~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 158 (257)
+++||+||++.. +++++.+++++++||++||+||||+|++|||+...+ .+++|++|+
T Consensus 77 ~~v~I~TK~~~~~~~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~----------------~~e~~~al~ 140 (327)
T 3eau_A 77 SSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTP----------------MEETVRAMT 140 (327)
T ss_dssp GGCEEEEEESBCCSSGGGBSSSHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSC----------------HHHHHHHHH
T ss_pred CeEEEEEeecCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEEeCCCCCCC----------------HHHHHHHHH
Confidence 999999999532 247899999999999999999999999999976433 889999999
Q ss_pred HHHHcCCeeEEEecCCCHHHHHHHHHhCC----CCCceeccccCCCCCc---HHHHHHHHHCCceEEEecCCCCCCCCCC
Q 025159 159 ECQNLGYTKAIGVSNFSCKKLGDILATAK----IPPAANQVEMNPLWQQ---NKLREFCKAKDIQLAAYAPLGARGTIWG 231 (257)
Q Consensus 159 ~l~~~G~ir~iGvs~~~~~~l~~~~~~~~----~~p~~~q~~~~~~~~~---~~~~~~~~~~gi~v~~~~pl~~~G~l~~ 231 (257)
+|+++||||+||||||+++++.++...+. ++|+++|++||+++++ .+++++|+++||++++|+||++ |+|++
T Consensus 141 ~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~-G~Ltg 219 (327)
T 3eau_A 141 HVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLAC-GIVSG 219 (327)
T ss_dssp HHHHTTSEEEEEEESCCHHHHHHHHHHHHHTTCCCCCEEEEECBTTBCHHHHHHHHHHHHHHCCEEEEECTTGG-GGGGT
T ss_pred HHHHcCCeeEEeecCCCHHHHHHHHHHHHHcCCCCceeecccccccccchhHhhHHHHHHHcCCeEEEeccccC-ceecC
Confidence 99999999999999999999999877543 7899999999999875 3689999999999999999998 99987
Q ss_pred CCCcc-----------------------------ChHHHHHHHHHhCCCcccccC
Q 025159 232 SNRVM-----------------------------ECEVLKEIAEAKGKTVAQVLI 257 (257)
Q Consensus 232 ~~~~~-----------------------------~~~~~~~ia~~~~~s~~qval 257 (257)
+.... ..+.+.++|++||+|++|+||
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aqvaL 274 (327)
T 3eau_A 220 KYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAI 274 (327)
T ss_dssp TTTTSCCTTSGGGSTTCHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred cccCCCCCCcccccccccccccccccchhHHHHHHHHHHHHHHHHhCcCHHHHHH
Confidence 53210 127889999999999999985
No 28
>1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1 PDB: 1pz0_A*
Probab=100.00 E-value=1.5e-53 Score=373.04 Aligned_cols=220 Identities=28% Similarity=0.406 Sum_probs=194.6
Q ss_pred CCceecCCCCCcCCccceeCCcCCC------CChhHHHHHHHHHHHcCCceeeCCCCCC---ChHHHHHHHHHHHhCCCC
Q 025159 12 IPDVPLKSSNRRMPVLGLGTAASPF------SGSETTKLAILEAMKLGYRHFDTATLYQ---TEQPLGDAIAEALSTGII 82 (257)
Q Consensus 12 m~~~~l~~~~~~vs~lglG~~~~~~------~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg---~e~~lg~~l~~~~~~~~~ 82 (257)
|++++||++|++||+||||||+++. .+.+++.++|+.|++.|||+||||+.|| ||+.+|++|++.
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~~~~~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~------ 74 (312)
T 1pyf_A 1 MKKAKLGKSDLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREF------ 74 (312)
T ss_dssp -CCEECTTSCCEECSBCEECTTSSCTTTCSSCCHHHHHHHHHHHHHTTCCEEECCTTTTTTHHHHHHHHHHTTS------
T ss_pred CCeeecCCCCCcccCEeEeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHhhhc------
Confidence 7899998877999999999999874 4678999999999999999999999999 899999999853
Q ss_pred CCCCcEEEEecc--CC------CCCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHH
Q 025159 83 KSRDELFIASKL--WC------SDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVW 154 (257)
Q Consensus 83 ~~R~~l~i~tK~--~~------~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (257)
+|+++||+||+ |+ .+.+++.+++++++||++||+||||+|++|||+... ..+++|
T Consensus 75 -~R~~~~i~TK~g~~~~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~----------------~~~e~~ 137 (312)
T 1pyf_A 75 -NREDVVIATKAAHRKQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHT----------------PKDEAV 137 (312)
T ss_dssp -CGGGCEEEEEECEEEETTEEEECCCHHHHHHHHHHHHHHHTSSCBSEEEECSCCSSS----------------CHHHHH
T ss_pred -CCCeEEEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCCCCCCC----------------CHHHHH
Confidence 69999999996 33 457899999999999999999999999999996533 378999
Q ss_pred HHHHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCc--HHHHHHHHHCCceEEEecCCCCCCCCCCC
Q 025159 155 EAMEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQ--NKLREFCKAKDIQLAAYAPLGARGTIWGS 232 (257)
Q Consensus 155 ~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~--~~~~~~~~~~gi~v~~~~pl~~~G~l~~~ 232 (257)
++|++|+++||||+||||||++++++++++.. +|+++|++||+++++ .+++++|+++||++++|+||++ |+|+++
T Consensus 138 ~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~--~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~-G~L~~~ 214 (312)
T 1pyf_A 138 NALNEMKKAGKIRSIGVSNFSLEQLKEANKDG--LVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVS-GLLAGK 214 (312)
T ss_dssp HHHHHHHHTTSBSCEEEESCCHHHHHHHTTTS--CCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEEESTTTT-TGGGTC
T ss_pred HHHHHHHHCCCcCEEEecCCCHHHHHHHHhhC--CceEEeccCCccccchHHHHHHHHHHcCCeEEEeccccc-ccccCC
Confidence 99999999999999999999999999998754 588999999999986 3599999999999999999998 998865
Q ss_pred CCcc-------------------------ChHHHHHHHHHhCCCcccccC
Q 025159 233 NRVM-------------------------ECEVLKEIAEAKGKTVAQVLI 257 (257)
Q Consensus 233 ~~~~-------------------------~~~~~~~ia~~~~~s~~qval 257 (257)
.... ..+.+.++|++||+|++|+||
T Consensus 215 ~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aqvaL 264 (312)
T 1pyf_A 215 YTEDTTFPEGDLRNEQEHFKGERFKENIRKVNKLAPIAEKHNVDIPHIVL 264 (312)
T ss_dssp CCTTCCCCTTCGGGGSGGGSHHHHHHHHHHHHTTHHHHHHTTSCHHHHHH
T ss_pred CCCCCCCCCcccccccccccchhHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 3210 126789999999999999985
No 29
>1pz1_A GSP69, general stress protein 69; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; HET: NAP; 2.20A {Bacillus subtilis} SCOP: c.1.7.1
Probab=100.00 E-value=5.9e-53 Score=372.38 Aligned_cols=221 Identities=28% Similarity=0.398 Sum_probs=198.4
Q ss_pred CCceecCCCCCcCCccceeCCcCCC-----CChhHHHHHHHHHHHcCCceeeCCCCCC---ChHHHHHHHHHHHhCCCCC
Q 025159 12 IPDVPLKSSNRRMPVLGLGTAASPF-----SGSETTKLAILEAMKLGYRHFDTATLYQ---TEQPLGDAIAEALSTGIIK 83 (257)
Q Consensus 12 m~~~~l~~~~~~vs~lglG~~~~~~-----~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg---~e~~lg~~l~~~~~~~~~~ 83 (257)
|++++||++|++||+||||||+++. .+.+++.++|+.|++.|||+||||+.|| ||+.+|++|++. +
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~~~~g~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~---~--- 74 (333)
T 1pz1_A 1 MEYTSIADTGIEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEY---M--- 74 (333)
T ss_dssp CCEEECTTSSCEEESEEEECTGGGCTTTTCCCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHHH---T---
T ss_pred CCceecCCCCCcccCEeEechhhcCCcCCCCCHHHHHHHHHHHHHcCCCeEECccccCCCchHHHHHHHHhcC---C---
Confidence 7899998888999999999999873 4678999999999999999999999999 999999999986 5
Q ss_pred CCCcEEEEeccC---CC-----CCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHH
Q 025159 84 SRDELFIASKLW---CS-----DAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWE 155 (257)
Q Consensus 84 ~R~~l~i~tK~~---~~-----~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (257)
+|+++||+||++ .. +.+++.+++++++||++||+||||+|+||||+... ..+++|+
T Consensus 75 ~R~~~~i~TK~~~~~~~~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~~lH~p~~~~----------------~~~e~~~ 138 (333)
T 1pz1_A 75 KRDQVILATKTALDWKNNQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDPLV----------------PIEETAE 138 (333)
T ss_dssp CGGGCEEEEEECEEESSSCEEECCCHHHHHHHHHHHHHHTTSSCBSEEEECSCCTTS----------------CHHHHHH
T ss_pred CcCeEEEEEeeCccCCCCCCCCCCCHHHHHHHHHHHHHHhCCCceeEEEecCCCCCC----------------CHHHHHH
Confidence 599999999996 31 46789999999999999999999999999996543 3789999
Q ss_pred HHHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCc--HHHHHHHHHCCceEEEecCCCCCCCCCCCC
Q 025159 156 AMEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQ--NKLREFCKAKDIQLAAYAPLGARGTIWGSN 233 (257)
Q Consensus 156 ~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~--~~~~~~~~~~gi~v~~~~pl~~~G~l~~~~ 233 (257)
+|++|+++||||+||||||++++++++++. .+|+++|++||+++++ .+++++|+++||++++|+||++ |+|+++.
T Consensus 139 al~~l~~~Gkir~iGvSn~~~~~l~~~~~~--~~~~~~Q~~~nl~~~~~e~~l~~~~~~~gi~v~a~spL~~-G~Ltg~~ 215 (333)
T 1pz1_A 139 VMKELYDAGKIRAIGVSNFSIEQMDTFRAV--APLHTIQPPYNLFEREMEESVLPYAKDNKITTLLYGSLCR-GLLTGKM 215 (333)
T ss_dssp HHHHHHHTTSBSCEEECSCCHHHHHHHHTT--SCCCEECCBCBTTBCGGGGTHHHHHHHTTCEEEEBCTTGG-GTTSSCC
T ss_pred HHHHHHHCCcCCEEEecCCCHHHHHHHHhc--CCcEEEeccccCccCchHHHHHHHHHHcCceEEEeecccC-CccCCCc
Confidence 999999999999999999999999999886 6788999999999986 7899999999999999999998 9998653
Q ss_pred C---------------ccCh----------HHHHHHHHHhCC-CcccccC
Q 025159 234 R---------------VMEC----------EVLKEIAEAKGK-TVAQVLI 257 (257)
Q Consensus 234 ~---------------~~~~----------~~~~~ia~~~~~-s~~qval 257 (257)
. .... +.+.++|++||+ |++|+||
T Consensus 216 ~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~~s~aqvaL 265 (333)
T 1pz1_A 216 TEEYTFEGDDLRNHDPKFQKPRFKEYLSAVNQLDKLAKTRYGKSVIHLAV 265 (333)
T ss_dssp CTTCCCCTTCGGGSCGGGSTTTHHHHHHHHHHHHHHHHHHHSCCHHHHHH
T ss_pred cccccCCCccccccccccchhhHHHHHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 1 1122 789999999999 9999985
No 30
>3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis}
Probab=100.00 E-value=7.3e-53 Score=368.74 Aligned_cols=224 Identities=38% Similarity=0.655 Sum_probs=204.5
Q ss_pred CCCCCCCCceecCCCCCcCCccceeCCcCCCCChhHHHHHHHHHHHcCCceeeCCCCCCChHHHHHHHHHHHhCCCCCCC
Q 025159 6 EMGSISIPDVPLKSSNRRMPVLGLGTAASPFSGSETTKLAILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGIIKSR 85 (257)
Q Consensus 6 ~~~~~~m~~~~l~~~~~~vs~lglG~~~~~~~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~~lg~~l~~~~~~~~~~~R 85 (257)
+|+.+.-.+++|++| ++||.||||||+++ +.+++.++|+.|++.|||+||||+.||+|..+|+++++.+.+..+ .|
T Consensus 34 ~~~~~~~~~~TLn~G-~~ip~lGlGt~~~~--d~~e~~~~v~~Al~~Gi~~~DTA~~YgnE~~vG~~l~~~~~~~~i-~r 109 (314)
T 3b3d_A 34 SMTTHLQAKATLHNG-VEMPWFGLGVFQVE--EGSELVNAVKTAIVHGYRSIDTAAIYGNEAGVGEGIREGIEEAGI-SR 109 (314)
T ss_dssp -CCSSTTCEEECTTS-CEEESBCEECCSCC--CSHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHHHTC-CG
T ss_pred ccccccCCcEECCCc-CcccceeEECCCCC--CHHHHHHHHHHHHHcCCCEEECccccCChHHHHHHHHHHHHHhCC-Cc
Confidence 556666788999988 99999999999974 568899999999999999999999999999999999876654333 89
Q ss_pred CcEEEEeccCCCCCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCC
Q 025159 86 DELFIASKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGY 165 (257)
Q Consensus 86 ~~l~i~tK~~~~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ 165 (257)
+++++.+|+|..+.+++.+++++++||++||+||||+|++|||+.. ...++|++|++|+++||
T Consensus 110 ~~~~i~~k~~~~~~~~~~~~~~~e~SL~rL~~dyiDL~~~H~~~~~-----------------~~~e~~~al~~l~~~Gk 172 (314)
T 3b3d_A 110 EDLFITSKVWNADLGYEETLAAFETSLSKLGLDYLDLYLIHWPVEG-----------------KYKEAWRALETLYKEGR 172 (314)
T ss_dssp GGCEEEEEECGGGCSHHHHHHHHHHHHHHHTCSCEEEEEESSCCTT-----------------THHHHHHHHHHHHHTTS
T ss_pred ccccccccCcCCCCCHHHHHHHHHHHHHHhCCCccccccccccccc-----------------chhHHHHHHHHHHHCCC
Confidence 9999999999999999999999999999999999999999998642 36799999999999999
Q ss_pred eeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCCCCCCCCccChHHHHHHH
Q 025159 166 TKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTIWGSNRVMECEVLKEIA 245 (257)
Q Consensus 166 ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~l~~~~~~~~~~~~~~ia 245 (257)
||+||||||++++++++++.+.++|.++|+++++...+.+++++|+++||++++|+||++ |.|++ .+.+.++|
T Consensus 173 ir~iGvSn~~~~~l~~~~~~~~i~~~~nq~~~~~~~~~~~ll~~c~~~gI~v~a~sPL~~-G~L~~------~~~~~~ia 245 (314)
T 3b3d_A 173 IKAIGVSNFQIHHLEDLMTAAEIKPMINQVEFHPRLTQKELIRYCQNQGIQMEAWSPLMQ-GQLLD------HPVLADIA 245 (314)
T ss_dssp EEEEEEESCCHHHHHHHTTTCSSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTGG-GTTTT------CHHHHHHH
T ss_pred EeEEEecCCchHHHHHHHHhcCCCeEEEEeccccccchHHHHHHHHHcCCEEEEeccccC-CcccC------chhhHHHH
Confidence 999999999999999999999999999999999988889999999999999999999998 88754 47789999
Q ss_pred HHhCCCcccccC
Q 025159 246 EAKGKTVAQVLI 257 (257)
Q Consensus 246 ~~~~~s~~qval 257 (257)
+++|+|++||||
T Consensus 246 ~~~g~t~aqvaL 257 (314)
T 3b3d_A 246 QTYNKSVAQIIL 257 (314)
T ss_dssp HHTTCCHHHHHH
T ss_pred HHcCCCHHHHHH
Confidence 999999999985
No 31
>3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus}
Probab=100.00 E-value=7.7e-53 Score=376.20 Aligned_cols=225 Identities=29% Similarity=0.417 Sum_probs=199.1
Q ss_pred CCCCceecCCCCCcCCccceeCC-cCCC-CChhHHHHHHHHHHHcCCceeeCCCCCCC---hHHHHHHHHHHHhCCCCCC
Q 025159 10 ISIPDVPLKSSNRRMPVLGLGTA-ASPF-SGSETTKLAILEAMKLGYRHFDTATLYQT---EQPLGDAIAEALSTGIIKS 84 (257)
Q Consensus 10 ~~m~~~~l~~~~~~vs~lglG~~-~~~~-~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~---e~~lg~~l~~~~~~~~~~~ 84 (257)
..| +|+||++|++||+|||||| .+|. .+.+++.++|+.|++.|||+||||+.||+ |+.+|++|++. ++ +
T Consensus 36 ~~m-yr~lG~tg~~vs~iglGt~~~~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~---~~--~ 109 (367)
T 3lut_A 36 LQF-YRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKK---GW--R 109 (367)
T ss_dssp CCS-EEESTTSSCEEESEEEECTTCCCCCSCHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHH---TC--C
T ss_pred hhc-eeecCCCCCcccceeECCccccCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHHHhC---CC--C
Confidence 348 9999999999999999998 5554 67889999999999999999999999984 99999999987 76 7
Q ss_pred CCcEEEEeccCCC-------CCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHH
Q 025159 85 RDELFIASKLWCS-------DAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAM 157 (257)
Q Consensus 85 R~~l~i~tK~~~~-------~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 157 (257)
|+++||+||++.. +.+++.+++++++||++||+||||+|+||||+...+ .+++|++|
T Consensus 110 R~~v~I~TK~~~~~~~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~pd~~~~----------------~~e~~~al 173 (367)
T 3lut_A 110 RSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTP----------------MEETVRAM 173 (367)
T ss_dssp GGGCEEEEEESBCCSSGGGBSSCHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSC----------------HHHHHHHH
T ss_pred CceEEEEeccccCCCCccCCCCCHHHHHHHHHHHHHHhCCCccceEEecCCCCCCC----------------HHHHHHHH
Confidence 9999999999432 346899999999999999999999999999976433 88999999
Q ss_pred HHHHHcCCeeEEEecCCCHHHHHHHHHhCC----CCCceeccccCCCCCcH---HHHHHHHHCCceEEEecCCCCCCCCC
Q 025159 158 EECQNLGYTKAIGVSNFSCKKLGDILATAK----IPPAANQVEMNPLWQQN---KLREFCKAKDIQLAAYAPLGARGTIW 230 (257)
Q Consensus 158 ~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~----~~p~~~q~~~~~~~~~~---~~~~~~~~~gi~v~~~~pl~~~G~l~ 230 (257)
++|+++||||+||||||+++++++++..+. ++|+++|++||+++++. +++++|+++||++++|+||++ |+|+
T Consensus 174 ~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~-G~Lt 252 (367)
T 3lut_A 174 THVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLAC-GIVS 252 (367)
T ss_dssp HHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCHHHHTHHHHHHHHHCCEEEEECTTGG-GGGG
T ss_pred HHHHHcCCeeEEEecCCCHHHHHHHHHHHHHcCCCCceeeeccccceecchhHhHHHHHHHHcCCeEEEeccccc-cccc
Confidence 999999999999999999999999877653 78999999999999864 899999999999999999998 9998
Q ss_pred CCCCcc-----------------------------ChHHHHHHHHHhCCCcccccC
Q 025159 231 GSNRVM-----------------------------ECEVLKEIAEAKGKTVAQVLI 257 (257)
Q Consensus 231 ~~~~~~-----------------------------~~~~~~~ia~~~~~s~~qval 257 (257)
++.... ..+.+.++|++||+|++||||
T Consensus 253 gk~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iA~~~g~t~aqvaL 308 (367)
T 3lut_A 253 GKYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAI 308 (367)
T ss_dssp TTTTTSCCTTSGGGSTTCHHHHHHHTSHHHHHHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred CCcCCCCCCcccccccccccccccccchhhHHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 753210 126889999999999999985
No 32
>3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} SCOP: c.1.7.0 PDB: 4ast_A 4aub_A*
Probab=100.00 E-value=4e-52 Score=368.91 Aligned_cols=233 Identities=24% Similarity=0.353 Sum_probs=198.8
Q ss_pred cCCCCCCCCCceecCCCCCcCCccceeCCc-CCC-CChhHHHHHHHHHHHcCCceeeCCCCCCC-----hHHHHHHHHHH
Q 025159 4 GSEMGSISIPDVPLKSSNRRMPVLGLGTAA-SPF-SGSETTKLAILEAMKLGYRHFDTATLYQT-----EQPLGDAIAEA 76 (257)
Q Consensus 4 ~~~~~~~~m~~~~l~~~~~~vs~lglG~~~-~~~-~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~-----e~~lg~~l~~~ 76 (257)
+.+.....|++++||++|++||.||||||. +|. .+.+++.++|+.|++.|||+||||+.||+ |+.+|++|++.
T Consensus 5 ~~~~~~~~M~~r~lg~tg~~vs~lglGt~~~~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~al~~~ 84 (346)
T 3n6q_A 5 ANPERYGQMQYRYCGKSGLRLPALSLGLWHNFGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLRED 84 (346)
T ss_dssp CCTTTTSSCCEEECTTSSCEEESEEEECSSSCSTTSCHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHHHHHH
T ss_pred cCCCcccCceeEecCCCCCeecCeeecCccccCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCCCcHHHHHHHHHHhh
Confidence 334445569999999999999999999975 443 57789999999999999999999999996 99999999986
Q ss_pred HhCCCCCCCCcEEEEeccC----CC----CCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCc
Q 025159 77 LSTGIIKSRDELFIASKLW----CS----DAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPM 148 (257)
Q Consensus 77 ~~~~~~~~R~~l~i~tK~~----~~----~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~ 148 (257)
+.. .|+++||+||++ +. ..+++.+++++++||++||+||||+|+||||+...+
T Consensus 85 ---~~~-~R~~~~I~TK~g~~~~~~~~~~~~s~~~i~~~~e~SL~rL~~dyiDl~~lH~p~~~~~--------------- 145 (346)
T 3n6q_A 85 ---FAA-YRDELIISTKAGYDMWPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTP--------------- 145 (346)
T ss_dssp ---CTT-TGGGCEEEEEECSCCSSSTTSSSSCHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSC---------------
T ss_pred ---ccc-ccccEEEEEEecccCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEeEEEEeCCCCCCC---------------
Confidence 431 499999999963 22 227899999999999999999999999999976433
Q ss_pred cHHHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHh---CCCCCceeccccCCCCCc--H-HHHHHHHHCCceEEEecC
Q 025159 149 DFKSVWEAMEECQNLGYTKAIGVSNFSCKKLGDILAT---AKIPPAANQVEMNPLWQQ--N-KLREFCKAKDIQLAAYAP 222 (257)
Q Consensus 149 ~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~---~~~~p~~~q~~~~~~~~~--~-~~~~~~~~~gi~v~~~~p 222 (257)
.+++|++|++|+++||||+||||||++++++++++. ..++|+++|++||++++. . +++++|+++||++++|+|
T Consensus 146 -~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~Q~~~~l~~~~~~~~~l~~~~~~~gi~v~a~sp 224 (346)
T 3n6q_A 146 -MEETASALAHAVQSGKALYVGISSYSPERTQKMVELLREWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTP 224 (346)
T ss_dssp -HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHTTTCCCCEEECBCBTTBCHHHHTTHHHHHHHHTCEEEEBST
T ss_pred -HHHHHHHHHHHHHcCCeeEEEeCCCCHHHHHHHHHHHHHcCCCeEEEeccCchhhcCcchhhHHHHHHHcCCeEEEecc
Confidence 789999999999999999999999999999987554 457889999999999885 3 799999999999999999
Q ss_pred CCCCCCCCCCCCc-----------------cCh-----------HHHHHHHHHhCCCcccccC
Q 025159 223 LGARGTIWGSNRV-----------------MEC-----------EVLKEIAEAKGKTVAQVLI 257 (257)
Q Consensus 223 l~~~G~l~~~~~~-----------------~~~-----------~~~~~ia~~~~~s~~qval 257 (257)
|++ |+|+++... +.. +.+.++|++||+|++|+||
T Consensus 225 L~~-G~L~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~iA~~~g~t~aqvaL 286 (346)
T 3n6q_A 225 LAQ-GLLTGKYLNGIPQDSRMHREGNKVRGLTPKMLTEANLNSLRLLNEMAQQRGQSMAQMAL 286 (346)
T ss_dssp TGG-GGGGTSCC-----------------------CCHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred ccC-eecCCCccCCCCCccccccccccccccchhhhhHHHHHHHHHHHHHHHHhCcCHHHHHH
Confidence 998 999865210 111 3899999999999999985
No 33
>3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp}
Probab=100.00 E-value=3.2e-52 Score=370.34 Aligned_cols=227 Identities=23% Similarity=0.369 Sum_probs=197.0
Q ss_pred CCCCceecCCCCCcCCccceeCC-cCCC-CChhHHHHHHHHHHHcCCceeeCCCCCCC-----hHHHHHHHHHHHhCCCC
Q 025159 10 ISIPDVPLKSSNRRMPVLGLGTA-ASPF-SGSETTKLAILEAMKLGYRHFDTATLYQT-----EQPLGDAIAEALSTGII 82 (257)
Q Consensus 10 ~~m~~~~l~~~~~~vs~lglG~~-~~~~-~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~-----e~~lg~~l~~~~~~~~~ 82 (257)
..|++++||++|++||+|||||| .+|. .+.+++.++|+.|++.|||+||||+.||+ |+.+|++|++.+. +
T Consensus 32 ~~M~~r~lg~tg~~vs~lglGt~~~~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~al~~~~~-~-- 108 (353)
T 3erp_A 32 HTMEYRRCGRSGVKLPAISLGLWHNFGDTTRVENSRALLQRAFDLGITHFDLANNYGPPPGSAECNFGRILQEDFL-P-- 108 (353)
T ss_dssp TSCCEEECSSSSCEEESEEEECSSSCSTTSCHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHHHHHHTG-G--
T ss_pred ccceeeecCCCCCccCCeeecChhhcCCCCCHHHHHHHHHHHHHcCCCEEEChhhhCCCCChHHHHHHHHHHhhcc-C--
Confidence 34999999998899999999998 5654 57889999999999999999999999997 9999999997311 1
Q ss_pred CCCCcEEEEeccCCC--------CCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHH
Q 025159 83 KSRDELFIASKLWCS--------DAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVW 154 (257)
Q Consensus 83 ~~R~~l~i~tK~~~~--------~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (257)
.|+++||+||++.. ..+++.+++++++||++||+||||+|+||||+...+ .+++|
T Consensus 109 -~R~~v~I~TK~g~~~~~~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~----------------~~e~~ 171 (353)
T 3erp_A 109 -WRDELIISTKAGYTMWDGPYGDWGSRKYLIASLDQSLKRMGLEYVDIFYHHRPDPETP----------------LKETM 171 (353)
T ss_dssp -GGGGCEEEEEESSCCSSSTTSSTTCHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSC----------------HHHHH
T ss_pred -CCCeEEEEeeeccCCCCCcccCCCCHHHHHHHHHHHHHHhCCCeEeEEEecCCCCCCC----------------HHHHH
Confidence 49999999998421 137899999999999999999999999999976433 78999
Q ss_pred HHHHHHHHcCCeeEEEecCCCHHHHHHHHHhC---CCCCceeccccCCCCC--cHHHHHHHHHCCceEEEecCCCCCCCC
Q 025159 155 EAMEECQNLGYTKAIGVSNFSCKKLGDILATA---KIPPAANQVEMNPLWQ--QNKLREFCKAKDIQLAAYAPLGARGTI 229 (257)
Q Consensus 155 ~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~---~~~p~~~q~~~~~~~~--~~~~~~~~~~~gi~v~~~~pl~~~G~l 229 (257)
++|++|+++||||+||||||++++++++++.+ +++|.++|++||++++ +.+++++|+++||++++|+||++ |+|
T Consensus 172 ~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~Q~~~~~~~~~~e~~ll~~~~~~gI~v~a~spL~~-G~L 250 (353)
T 3erp_A 172 KALDHLVRHGKALYVGISNYPADLARQAIDILEDLGTPCLIHQPKYSLFERWVEDGLLALLQEKGVGSIAFSPLAG-GQL 250 (353)
T ss_dssp HHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCEEEEECBCBTTBCGGGGTHHHHHHHHTCEEEEBSTTGG-GTS
T ss_pred HHHHHHHHCCCccEEEecCCCHHHHHHHHHHHHHcCCCeEEeeccccccccchhhHHHHHHHHcCCeEEEeccccc-ccc
Confidence 99999999999999999999999999987754 3889999999999987 36799999999999999999998 999
Q ss_pred CCCCCc--------------cC-----------hHHHHHHHHHhCCCcccccC
Q 025159 230 WGSNRV--------------ME-----------CEVLKEIAEAKGKTVAQVLI 257 (257)
Q Consensus 230 ~~~~~~--------------~~-----------~~~~~~ia~~~~~s~~qval 257 (257)
+++... +. .+.+.++|+++|+|++|+||
T Consensus 251 tg~~~~~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~l~~iA~~~g~t~aqvaL 303 (353)
T 3erp_A 251 TDRYLNGIPEDSRAASGSRFLKPEQITADKLEKVRRLNELAARRGQKLSQMAL 303 (353)
T ss_dssp SGGGTC-------------------CCHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred CCCccCCCCCcccccccccccccccccHHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 764110 11 14899999999999999985
No 34
>4gac_A Alcohol dehydrogenase [NADP(+)]; TIM barrel, aldheyde reductase AKR1A4, SMAR1, oxidoreductase; HET: FLC; 1.64A {Mus musculus} PDB: 2alr_A 3h4g_A* 3cv7_A* 3fx4_A* 1ae4_A* 1cwn_A* 1hqt_A*
Probab=100.00 E-value=2.7e-52 Score=366.87 Aligned_cols=241 Identities=39% Similarity=0.705 Sum_probs=211.9
Q ss_pred CCceecCCCCCcCCccceeCCcCCCCChhHHHHHHHHHHHcCCceeeCCCCCCChHHHHHHHHHHHhCCCCCCCCcEEEE
Q 025159 12 IPDVPLKSSNRRMPVLGLGTAASPFSGSETTKLAILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGIIKSRDELFIA 91 (257)
Q Consensus 12 m~~~~l~~~~~~vs~lglG~~~~~~~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~~lg~~l~~~~~~~~~~~R~~l~i~ 91 (257)
.+++.|++| ++||.||||||+ .+.+++.++|+.|++.|||+||||+.||||+.+|++|++.........|++++++
T Consensus 2 ~~~v~LntG-~~vp~iGlGtw~---~~~~~a~~~i~~Al~~Gin~~DTA~~YgsE~~vG~al~~~~~~~~~~~r~~~~~~ 77 (324)
T 4gac_A 2 ASSVLLHTG-QKMPLIGLGTWK---SEPGQVKAAIKHALSAGYRHIDCASVYGNETEIGEALKESVGSGKAVPREELFVT 77 (324)
T ss_dssp CCEEECTTS-CEEESBCEECTT---CCHHHHHHHHHHHHHTTCCEEECCGGGSCHHHHHHHHHHHBSTTSSBCGGGCEEE
T ss_pred CCeEECCCC-CEeccceeECCC---CCHHHHHHHHHHHHHcCCCEEECCcccCCHHHHHHHHHhhhcccceecccccccc
Confidence 578899888 999999999998 5789999999999999999999999999999999999987655433379999999
Q ss_pred eccCCCCCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCccc---CCCCccHHHHHHHHHHHHHcCCeeE
Q 025159 92 SKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKE---DFLPMDFKSVWEAMEECQNLGYTKA 168 (257)
Q Consensus 92 tK~~~~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~G~ir~ 168 (257)
+|++....+++.+++++++||++||+||||+|++|||+...++....+...+ .......+++|++|++|+++||||+
T Consensus 78 ~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~al~~l~~~Gkir~ 157 (324)
T 4gac_A 78 SKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTVRYDSTHYKETWKALEVLVAKGLVKA 157 (324)
T ss_dssp EEECGGGCSHHHHHHHHHHHHHHHTCSCBSEEEESCSSEECSSSCSSCBCTTSCBCEECCCHHHHHHHHHHHHHTTSBSC
T ss_pred cccCCCCCCHHHHHHHHHHHHHHhCCCccceeeeccCcccccccccccccccCccccCCCCHHHHHHHHHHHHHCCCeeE
Confidence 9999988899999999999999999999999999999765443332222111 1234568999999999999999999
Q ss_pred EEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCCCCCCC----CccChHHHHHH
Q 025159 169 IGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTIWGSN----RVMECEVLKEI 244 (257)
Q Consensus 169 iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~l~~~~----~~~~~~~~~~i 244 (257)
||||||++++++++...+.+.|.++|+++++...+.+++++|+++||++++|+||++ |.+++.. .....+.+.++
T Consensus 158 iGvSn~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~l~~~~~~~gi~~~a~spL~~-g~~~~~~~~~~~~~~~~~l~~i 236 (324)
T 4gac_A 158 LGLSNFNSRQIDDVLSVASVRPAVLQVECHPYLAQNELIAHCHARGLEVTAYSPLGS-SDRAWRHPDEPVLLEEPVVLAL 236 (324)
T ss_dssp EEEESCCHHHHHHHHHHCSSCCCEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTCC-GGGGGGSTTSCCGGGCHHHHHH
T ss_pred ecCCCCCHHHHHHHHHhCCCCcceeeeccCchhhHHHHHHHHHHhceeeeecCCccc-CccccCCCCCcchhhHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999998 8876433 24557899999
Q ss_pred HHHhCCCcccccC
Q 025159 245 AEAKGKTVAQVLI 257 (257)
Q Consensus 245 a~~~~~s~~qval 257 (257)
|++||+|++||||
T Consensus 237 A~~~g~t~aqvaL 249 (324)
T 4gac_A 237 AEKHGRSPAQILL 249 (324)
T ss_dssp HHHHTCCHHHHHH
T ss_pred HHHhCCCHHHHHH
Confidence 9999999999985
No 35
>1lqa_A TAS protein; TIM barrel, structure 2 function project, S2F, structural GE oxidoreductase; HET: NDP; 1.60A {Escherichia coli} SCOP: c.1.7.1
Probab=100.00 E-value=4.2e-52 Score=368.76 Aligned_cols=238 Identities=28% Similarity=0.357 Sum_probs=197.7
Q ss_pred CCceecCCCCCcCCccceeCCcCCC-CChhHHHHHHHHHHHcCCceeeCCCCC---------C-ChHHHHHHHHHHHhCC
Q 025159 12 IPDVPLKSSNRRMPVLGLGTAASPF-SGSETTKLAILEAMKLGYRHFDTATLY---------Q-TEQPLGDAIAEALSTG 80 (257)
Q Consensus 12 m~~~~l~~~~~~vs~lglG~~~~~~-~~~~~~~~~l~~Al~~Gi~~~DtA~~Y---------g-~e~~lg~~l~~~~~~~ 80 (257)
|++++||++|++||+||||||+|+. .+.+++.++|+.|++.|||+||||+.| | ||+.+|++|++. +
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~~~~~~G~sE~~lG~al~~~---~ 77 (346)
T 1lqa_A 1 MQYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKH---G 77 (346)
T ss_dssp CCEEECTTSSCEEESEEEECTTBTTTBCHHHHHHHHHHHHHTTCCEEECCTTCSSSCCTTTTTHHHHHHHHHHHHH---C
T ss_pred CCeeecCCCCCeecCeeEEccccCCCCCHHHHHHHHHHHHHcCCCEEEChhhcCCCccCCCCCccHHHHHHHHhhc---C
Confidence 7899999777999999999999875 578899999999999999999999999 2 899999999986 5
Q ss_pred CCCCCCcEEEEeccCCC------------CCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCC--CCCCCCCcccCCC
Q 025159 81 IIKSRDELFIASKLWCS------------DAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKP--GSYEFPIKKEDFL 146 (257)
Q Consensus 81 ~~~~R~~l~i~tK~~~~------------~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~--~~~~~~~~~~~~~ 146 (257)
+|+++||+||++.. +.+++.+++++++||++||+||||+|+||||....+ +....+..+ ...
T Consensus 78 ---~R~~~~i~TK~~~~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~d-~~~ 153 (346)
T 1lqa_A 78 ---SREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTD-SAP 153 (346)
T ss_dssp ---CGGGCEEEEEECCSCCTTCCCSSTTCCSSHHHHHHHHHHHHHHHTSSCEEEEEECSCSSCCSCTTCCSCCCCS-SCC
T ss_pred ---CCceEEEEEeECCCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCceeEEEecCccccccccccccccccc-ccc
Confidence 69999999999642 267899999999999999999999999999954321 000000000 001
Q ss_pred CccHHHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHhC---C-CCCceeccccCCCCCc--HHHHHHHHHCCceEEEe
Q 025159 147 PMDFKSVWEAMEECQNLGYTKAIGVSNFSCKKLGDILATA---K-IPPAANQVEMNPLWQQ--NKLREFCKAKDIQLAAY 220 (257)
Q Consensus 147 ~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~---~-~~p~~~q~~~~~~~~~--~~~~~~~~~~gi~v~~~ 220 (257)
....+++|++|++|+++||||+||||||++++++++++.+ . .+|+++|++||++++. .+++++|+++||++++|
T Consensus 154 ~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~l~~~~~~~~l~~~~~~~gi~v~a~ 233 (346)
T 1lqa_A 154 AVSLLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAY 233 (346)
T ss_dssp SSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCTHHHHHHHHHHHHCCEEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCeEEEEecCCCHHHHHHHHHHHHHcCCCCceEEeccCChhhchhHHHHHHHHHHcCCeEEEe
Confidence 2357899999999999999999999999999988877654 2 5789999999999885 78999999999999999
Q ss_pred cCCCCCCCCCCCCCc-----------------cCh-------HHHHHHHHHhCCCcccccC
Q 025159 221 APLGARGTIWGSNRV-----------------MEC-------EVLKEIAEAKGKTVAQVLI 257 (257)
Q Consensus 221 ~pl~~~G~l~~~~~~-----------------~~~-------~~~~~ia~~~~~s~~qval 257 (257)
+||++ |+|+++... ... +.+.++|++||+|++|+||
T Consensus 234 spL~~-G~L~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~s~aqvaL 293 (346)
T 1lqa_A 234 SCLGF-GTLTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQMAL 293 (346)
T ss_dssp CTTGG-GGGGTTTGGGCCCTTCHHHHCTTCCTTCSHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred cchhh-hhhcCccccccCCCcchhhcchhhcccccHHHHHHHHHHHHHHHHHCcCHHHHHH
Confidence 99997 998764210 011 3789999999999999985
No 36
>3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A 3v0t_A* 3uyi_A*
Probab=100.00 E-value=7.1e-53 Score=372.42 Aligned_cols=220 Identities=24% Similarity=0.396 Sum_probs=194.6
Q ss_pred CCceecCCCCCcCCccceeCCcCCC-----CChhHHHHHHHHHHHcCCceeeCCCCCC----ChHHHHHHHHHHHhCCCC
Q 025159 12 IPDVPLKSSNRRMPVLGLGTAASPF-----SGSETTKLAILEAMKLGYRHFDTATLYQ----TEQPLGDAIAEALSTGII 82 (257)
Q Consensus 12 m~~~~l~~~~~~vs~lglG~~~~~~-----~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg----~e~~lg~~l~~~~~~~~~ 82 (257)
|++++||++|++||+||||||+++. .+.+++.++|+.|++.|||+||||+.|| ||+.+|++|++.
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~G~sE~~lG~al~~~------ 74 (337)
T 3v0s_A 1 MPRVKLGTQGLEVSKLGFGCMGLSGDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGENGSNEELLGKALKQL------ 74 (337)
T ss_dssp CCEEECSSSSCEEESSCEECGGGC-------CHHHHHHHHHHHHHTTCCEEECCTTSSSTTHHHHHHHHHHTTS------
T ss_pred CCeeecCCCCceecCeeecccccCCCCCCCCCHHHHHHHHHHHHHcCCCEEEChhhhCCCCcHHHHHHHHHhhc------
Confidence 8899999888999999999998763 4778999999999999999999999998 899999999853
Q ss_pred CCCCcEEEEeccCCC---------CCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHH
Q 025159 83 KSRDELFIASKLWCS---------DAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSV 153 (257)
Q Consensus 83 ~~R~~l~i~tK~~~~---------~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (257)
+|+++||+||++.. +.+++.+++++++||++||+||||+|++|||+...+ .+++
T Consensus 75 -~R~~~~i~TK~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~~lH~p~~~~~----------------~~e~ 137 (337)
T 3v0s_A 75 -PREXIQVGTKFGIHEIGFSGVKAXGTPDYVRSCCEASLKRLDVDYIDLFYIHRIDTTVP----------------IEIT 137 (337)
T ss_dssp -CGGGCEEEEEECEEEEETTEEEECCCHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSC----------------HHHH
T ss_pred -CCcceEEEeeeccccCCCCcccCCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCCCC----------------HHHH
Confidence 69999999999764 457899999999999999999999999999976433 7899
Q ss_pred HHHHHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCc--HHHHHHHHHCCceEEEecCCCCCCCCCC
Q 025159 154 WEAMEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQ--NKLREFCKAKDIQLAAYAPLGARGTIWG 231 (257)
Q Consensus 154 ~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~--~~~~~~~~~~gi~v~~~~pl~~~G~l~~ 231 (257)
|++|++|+++||||+||||||++++++++++.. ++.++|++||+++++ .+++++|+++||++++|+||++ |+|++
T Consensus 138 ~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~--~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~-G~L~g 214 (337)
T 3v0s_A 138 MGELXXLVEEGKIXYVGLSEASPDTIRRAHAVH--PVTALQIEYSLWTRDIEDEIVPLCRQLGIGIVPYSPIGR-GLFWG 214 (337)
T ss_dssp HHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHS--CCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEEESTTHH-HHHHH
T ss_pred HHHHHHHHHCCCeeEEeccCCCHHHHHHHhccC--CceEEEeeccccccchhHHHHHHHHHcCceEEEeccccC-cccCC
Confidence 999999999999999999999999999998875 456999999999885 6899999999999999999997 88764
Q ss_pred CCC------------------------ccChHHHHHHHHHhCCCcccccC
Q 025159 232 SNR------------------------VMECEVLKEIAEAKGKTVAQVLI 257 (257)
Q Consensus 232 ~~~------------------------~~~~~~~~~ia~~~~~s~~qval 257 (257)
+.. ....+.+.++|++||+|++||||
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~g~t~aqvaL 264 (337)
T 3v0s_A 215 KAIKESLPENSVLTSHPRFVGENLEKNKQIYYRIEALSQKHGCTPVQLAL 264 (337)
T ss_dssp HHHHC-------------------------CHHHHHHHHHTTSCHHHHHH
T ss_pred CCCCCCCCCcchhhcccccchhhhhhHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 210 11126899999999999999985
No 37
>4exb_A Putative uncharacterized protein; aldo-keto reductase, NADP+ binding, oxidoreducta; 2.75A {Pseudomonas aeruginosa} PDB: 4exa_A
Probab=100.00 E-value=5e-52 Score=359.88 Aligned_cols=211 Identities=19% Similarity=0.192 Sum_probs=180.0
Q ss_pred CCCCCCCCCceecCCCCCcCCccceeCCcCCC------------CChhHHHHHHHHHHHcCCceeeCCCCCC-ChHHHHH
Q 025159 5 SEMGSISIPDVPLKSSNRRMPVLGLGTAASPF------------SGSETTKLAILEAMKLGYRHFDTATLYQ-TEQPLGD 71 (257)
Q Consensus 5 ~~~~~~~m~~~~l~~~~~~vs~lglG~~~~~~------------~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg-~e~~lg~ 71 (257)
+..+...|++++||++|++||+||||||+++. .+.+++.++|+.|++.|||+||||+.|| +|+.+|+
T Consensus 23 ~~~~~~~m~~r~Lg~tg~~vs~lglGt~~~g~~~~~~~~~~~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~sE~~lG~ 102 (292)
T 4exb_A 23 MIRDTLHDLHRPLGDTGLAVSPLGLGTVKFGRDQGVKYPSGFTIPDDREAADLLALARDLGINLIDTAPAYGRSEERLGP 102 (292)
T ss_dssp CCCSCSTTCCEECTTSSCEECSEEEECSTTTCC---------CCCCHHHHHHHHHHHHHTTCCEEECCTTSTTHHHHHHH
T ss_pred ccCCCCCceeeecCCCCCccCCEeEcccccCCCcccccccccCCCCHHHHHHHHHHHHHcCCCEEEcCCccchHHHHHHH
Confidence 33446679999999888999999999999874 5678999999999999999999999999 9999999
Q ss_pred HHHHHHhCCCCCCCCcEEEEeccCC--------CCCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCccc
Q 025159 72 AIAEALSTGIIKSRDELFIASKLWC--------SDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKE 143 (257)
Q Consensus 72 ~l~~~~~~~~~~~R~~l~i~tK~~~--------~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~ 143 (257)
+|+. +|+++||+||++. .+.+++.+++++++||++||+||||+|+||||....
T Consensus 103 al~~--------~R~~v~I~TK~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~d~----------- 163 (292)
T 4exb_A 103 LLRG--------QREHWVIVSKVGEEFVDGQSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSDGNDL----------- 163 (292)
T ss_dssp HHTT--------TGGGCEEEEEESBC--CCSCCBCCCHHHHHHHHHHHHHHTTSSCEEEEEEECCSCHH-----------
T ss_pred Hhcc--------CCCcEEEEEeeccccCCCCccCCCCHHHHHHHHHHHHHHhCCCceeEEEEecCCCCc-----------
Confidence 9984 5999999999973 246889999999999999999999999999993210
Q ss_pred CCCCccHH-HHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcH-HHHHHHHHCCceEEEec
Q 025159 144 DFLPMDFK-SVWEAMEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQN-KLREFCKAKDIQLAAYA 221 (257)
Q Consensus 144 ~~~~~~~~-~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~-~~~~~~~~~gi~v~~~~ 221 (257)
..... ++|++|++|+++||||+||||||++++++++++. |+++|++||+++++. +++++|+++||++++|+
T Consensus 164 ---~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~----~~~~Q~~~~~~~~~~~~l~~~~~~~gi~v~a~s 236 (292)
T 4exb_A 164 ---DILENSEVYPTLAALKREGLIGAYGLSGKTVEGGLRALRE----GDCAMVTYNLNERAERPVIEYAAAHAKGILVKK 236 (292)
T ss_dssp ---HHHHHSSHHHHHHHHHHTTSEEEEEEECSSHHHHHHHHHH----SSEEEEECSSSCCTTHHHHHHHHHTTCEEEEEC
T ss_pred ---cccchHHHHHHHHHHHHCCCceEEEeCCCCHHHHHHHHHh----hcEEeeccccccCCHHHHHHHHHHCCcEEEEec
Confidence 01234 8999999999999999999999999999999887 889999999999875 99999999999999999
Q ss_pred CCCCCCCCCCCCCccChHHHHHHHHHhCCCcccccC
Q 025159 222 PLGARGTIWGSNRVMECEVLKEIAEAKGKTVAQVLI 257 (257)
Q Consensus 222 pl~~~G~l~~~~~~~~~~~~~~ia~~~~~s~~qval 257 (257)
||++ |+|++ ++|+|++|+||
T Consensus 237 pL~~-G~L~~---------------~~g~t~aqvaL 256 (292)
T 4exb_A 237 ALAS-GHACL---------------GAGQDPVRASF 256 (292)
T ss_dssp CSCC------------------------CCHHHHHH
T ss_pred cccC-CccCC---------------CCCCCHHHHHH
Confidence 9997 87743 37777777764
No 38
>1ynp_A Oxidoreductase, AKR11C1; aldo-keto reductase, NADPH; HET: SUC; 1.25A {Bacillus halodurans} PDB: 1ynq_A*
Probab=100.00 E-value=2.3e-51 Score=359.80 Aligned_cols=219 Identities=20% Similarity=0.315 Sum_probs=189.4
Q ss_pred CCCCCceecCCCCCcCCccceeCCcCCCCChhHHHHHHHHHHHcCCceeeCCCCCC---ChHHHHHHHHHHHhCCCCCCC
Q 025159 9 SISIPDVPLKSSNRRMPVLGLGTAASPFSGSETTKLAILEAMKLGYRHFDTATLYQ---TEQPLGDAIAEALSTGIIKSR 85 (257)
Q Consensus 9 ~~~m~~~~l~~~~~~vs~lglG~~~~~~~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg---~e~~lg~~l~~~~~~~~~~~R 85 (257)
...|++++|+++|++||+||||||+++. +.+++.++|+.|++.|||+||||+.|| ||+.+|++|+. +|
T Consensus 18 ~~~M~~r~lg~tg~~vs~lglGt~~~g~-~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~--------~R 88 (317)
T 1ynp_A 18 GSHMKKRQLGTSDLHVSELGFGCMSLGT-DETKARRIMDEVLELGINYLDTADLYNQGLNEQFVGKALKG--------RR 88 (317)
T ss_dssp --CCCEEECTTSSCEEESBCBCSCCCCS-CHHHHHHHHHHHHHTTCCEEECSCBTTBCCCHHHHHHHHTT--------CG
T ss_pred cCCcceeecCCCCCcccCEeEcCcccCC-CHHHHHHHHHHHHHcCCCeEECccccCCCchHHHHHHHHhc--------CC
Confidence 4569999999888999999999999874 568899999999999999999999998 99999999983 59
Q ss_pred CcEEEEeccCCC----------CCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHH
Q 025159 86 DELFIASKLWCS----------DAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWE 155 (257)
Q Consensus 86 ~~l~i~tK~~~~----------~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (257)
+++||+||++.. +.+++.+++++++||++||+||||+|+||||+...+ .+++|+
T Consensus 89 ~~v~I~TK~~~~~~~~~~~~~~~~~~~~v~~~~e~SL~rL~~dyiDl~llH~p~~~~~----------------~~e~~~ 152 (317)
T 1ynp_A 89 QDIILATKVGNRFEQGKEGWWWDPSKAYIKEAVKDSLRRLQTDYIDLYQLHGGTIDDP----------------IDETIE 152 (317)
T ss_dssp GGCEEEEEC---------------CHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSC----------------HHHHHH
T ss_pred CeEEEEeeeCCCcCCCCccccCCCCHHHHHHHHHHHHHHHCCCcEeEEEecCCCCCCC----------------hHHHHH
Confidence 999999999642 467899999999999999999999999999965433 789999
Q ss_pred HHHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcH-HHHHHHHHCCceEEEecCCCCCCCCCCCCC
Q 025159 156 AMEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQN-KLREFCKAKDIQLAAYAPLGARGTIWGSNR 234 (257)
Q Consensus 156 ~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~-~~~~~~~~~gi~v~~~~pl~~~G~l~~~~~ 234 (257)
+|++|+++||||+||||||++++++++++... +.++|++||++++.. .++++|+++||++++|+||++ |+|+++.+
T Consensus 153 al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~--~~~~Q~~~nl~~~~~e~l~~~~~~~gI~v~a~spL~~-G~L~~~~~ 229 (317)
T 1ynp_A 153 AFEELKQEGVIRYYGISSIRPNVIKEYLKRSN--IVSIMMQYSILDRRPEEWFPLIQEHGVSVVVRGPVAR-GLLSRRPL 229 (317)
T ss_dssp HHHHHHHHTSEEEEEEECCCHHHHHHHHHHSC--CCEEEEECBTTBCGGGGGHHHHHHTTCEEEEECTTGG-GTTSSSCC
T ss_pred HHHHHHhCCceEEEEecCCCHHHHHHHHhcCC--CEEEeccCCchhCCHHHHHHHHHHcCCeEEEecCccC-cccCCCCC
Confidence 99999999999999999999999999999865 579999999998853 499999999999999999998 99886510
Q ss_pred -----c------cChHHHHHHHHHhCCCcccccC
Q 025159 235 -----V------MECEVLKEIAEAKGKTVAQVLI 257 (257)
Q Consensus 235 -----~------~~~~~~~~ia~~~~~s~~qval 257 (257)
. ...+.+.++|+ |+|++|+||
T Consensus 230 ~~~~~~~~~~~~~~~~~l~~ia~--g~s~aqvaL 261 (317)
T 1ynp_A 230 PEGEGYLNYRYDELKLLRESLPT--DRPLHELAL 261 (317)
T ss_dssp CTTCCBTTBCHHHHHHHHHHSCS--SSCHHHHHH
T ss_pred ccccccccccHHHHHHHHHHHHc--CCCHHHHHH
Confidence 0 01267888888 999999985
No 39
>1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A*
Probab=100.00 E-value=4.4e-50 Score=353.28 Aligned_cols=213 Identities=22% Similarity=0.280 Sum_probs=188.8
Q ss_pred cCCccceeCCcCCC-CChhHHHHHHHHHHHcCCceeeCCCCCC---ChHHHHHHHHHHHhCCCCCCCCcEEEEeccCCC-
Q 025159 23 RMPVLGLGTAASPF-SGSETTKLAILEAMKLGYRHFDTATLYQ---TEQPLGDAIAEALSTGIIKSRDELFIASKLWCS- 97 (257)
Q Consensus 23 ~vs~lglG~~~~~~-~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg---~e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~- 97 (257)
.+|+||||||+++. .+.+++.++|+.|++.|||+||||+.|| ||+.+|++|++. +. .|+++||+||+++.
T Consensus 4 ~~~~lglGt~~~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~---~~--~r~~~~i~TK~~~~~ 78 (327)
T 1gve_A 4 ARPATVLGAMEMGRRMDVTSSSASVRAFLQRGHTEIDTAFVYANGQSETILGDLGLGL---GR--SGCKVKIATKAAPMF 78 (327)
T ss_dssp CCCEEEEECTTBTTTBCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHTTSCCCT---TS--TTCCSEEEEEECSCT
T ss_pred CCCCeEEcccccCCCCCHHHHHHHHHHHHHcCCCEEEchhhcCCCchHHHHHHHHhhc---CC--CCCeEEEEEEECCCC
Confidence 47999999999976 4788999999999999999999999994 899999999753 33 47889999999865
Q ss_pred --CCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEEecCCC
Q 025159 98 --DAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGVSNFS 175 (257)
Q Consensus 98 --~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~ 175 (257)
+.+++.+++++++||++||+||||+|+||||+...+ .+++|++|++|+++||||+||||||+
T Consensus 79 ~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~----------------~~e~~~al~~l~~~Gkir~iGvSn~~ 142 (327)
T 1gve_A 79 GKTLKPADVRFQLETSLKRLQCPRVDLFYLHFPDHGTP----------------IEETLQACHQLHQEGKFVELGLSNYV 142 (327)
T ss_dssp TCCSSHHHHHHHHHHHHHHTTCSCEEEEEECSCCTTSC----------------HHHHHHHHHHHHHTTSEEEEEEESCC
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCeEeEEEecCCCCCCC----------------HHHHHHHHHHHHhCCceeEEEecCCC
Confidence 678999999999999999999999999999975433 78999999999999999999999999
Q ss_pred HHHHHHHHHhCC----CCCceeccccCCCCCc--HHHHHHHHHCCceEEEecCCCCCCCCCCCCC-----------ccC-
Q 025159 176 CKKLGDILATAK----IPPAANQVEMNPLWQQ--NKLREFCKAKDIQLAAYAPLGARGTIWGSNR-----------VME- 237 (257)
Q Consensus 176 ~~~l~~~~~~~~----~~p~~~q~~~~~~~~~--~~~~~~~~~~gi~v~~~~pl~~~G~l~~~~~-----------~~~- 237 (257)
+++++++++.+. ++|+++|++||+++++ .+++++|+++||++++|+||++ |+|+++.. .+.
T Consensus 143 ~~~l~~~~~~~~~~g~~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~-G~Ltg~~~~~~~~~~~~~~~~~~ 221 (327)
T 1gve_A 143 SWEVAEICTLCKKNGWIMPTVYQGMYNAITRQVETELFPCLRHFGLRFYAFNPLAG-GLLTGRYKYQDKDGKNPESRFFG 221 (327)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEEEEECBTTBCGGGTTHHHHHHHHTCEEEEECTTGG-GGGGTCCCGGGGGSCCCSSSSSS
T ss_pred HHHHHHHHHHHHHcCCCCeEEEeccCcceecccHHHHHHHHHHcCCeEEEeccccc-ccccCcccCCCccccCCCccccc
Confidence 999999887665 7899999999999886 6899999999999999999998 99887521 111
Q ss_pred -------------------hHHHHHHHHH----hCCCcccccC
Q 025159 238 -------------------CEVLKEIAEA----KGKTVAQVLI 257 (257)
Q Consensus 238 -------------------~~~~~~ia~~----~~~s~~qval 257 (257)
.+.+.++|++ ||+|++|+||
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~~~~~g~s~aqvaL 264 (327)
T 1gve_A 222 NPFSQLYMDRYWKEEHFNGIALVEKALKTTYGPTAPSMISAAV 264 (327)
T ss_dssp CTTHHHHHHHHCSHHHHHHHHHHHHHHHHHHCTTCCCHHHHHH
T ss_pred cccchhhhhcccChHHHHHHHHHHHHHHhhccccCCCHHHHHH
Confidence 1688999999 9999999985
No 40
>2bp1_A Aflatoxin B1 aldehyde reductase member 2; oxidoreductase, aldo-keto reductase family 7, SSA reductase, barrel; HET: FLC NDP; 2.4A {Homo sapiens}
Probab=100.00 E-value=9.6e-50 Score=355.20 Aligned_cols=215 Identities=22% Similarity=0.267 Sum_probs=187.1
Q ss_pred CCcCCccceeCCcCCC-CChhHHHHHHHHHHHcCCceeeCCCCCC---ChHHHHHHHHHHHhCCCCCCCCcEEEEeccCC
Q 025159 21 NRRMPVLGLGTAASPF-SGSETTKLAILEAMKLGYRHFDTATLYQ---TEQPLGDAIAEALSTGIIKSRDELFIASKLWC 96 (257)
Q Consensus 21 ~~~vs~lglG~~~~~~-~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg---~e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~ 96 (257)
+..+|+||||||++|. .+.+++.++|+.|++.|||+||||+.|| +|+.+|++|++. +. .|+++||+||+++
T Consensus 35 ~~~ip~lglGt~~~g~~~~~~~~~~~l~~Al~~Gin~~DTA~~Yg~G~sE~~lG~al~~~---~~--~r~~v~I~TK~~~ 109 (360)
T 2bp1_A 35 PPPRVASVLGTMEMGRRMDAPASAAAVRAFLERGHTELDTAFMYSDGQSETILGGLGLGL---GG--GDCRVKIATKANP 109 (360)
T ss_dssp ---CCEEEEECTTBTTTBCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHTSCCCT---TS--TTCCCEEEEEECC
T ss_pred CCCCCCEEECchhhCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCChHHHHHHHHhhc---cC--CCCeEEEEeeecC
Confidence 3779999999999975 4788999999999999999999999994 899999998632 11 3667999999987
Q ss_pred C---CCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEEecC
Q 025159 97 S---DAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGVSN 173 (257)
Q Consensus 97 ~---~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~ 173 (257)
. +.+++.+++++++||++||+||||+|+||||+...+ .+++|++|++|+++||||+|||||
T Consensus 110 ~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~----------------~~e~~~aL~~l~~~Gkir~iGvSn 173 (360)
T 2bp1_A 110 WDGKSLKPDSVRSQLETSLKRLQCPQVDLFYLHAPDHGTP----------------VEETLHACQRLHQEGKFVELGLSN 173 (360)
T ss_dssp CTTCCSSHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSC----------------HHHHHHHHHHHHHTTSEEEEEEES
T ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCeEeEEEecCCCCCCC----------------HHHHHHHHHHHHHCCCccEEEEeC
Confidence 6 678999999999999999999999999999965433 789999999999999999999999
Q ss_pred CCHHHHHHHHHhCC----CCCceeccccCCCCCc--HHHHHHHHHCCceEEEecCCCCCCCCCCCCC-----------cc
Q 025159 174 FSCKKLGDILATAK----IPPAANQVEMNPLWQQ--NKLREFCKAKDIQLAAYAPLGARGTIWGSNR-----------VM 236 (257)
Q Consensus 174 ~~~~~l~~~~~~~~----~~p~~~q~~~~~~~~~--~~~~~~~~~~gi~v~~~~pl~~~G~l~~~~~-----------~~ 236 (257)
|+.++++++++.+. ++|.++|++||+++++ .+++++|+++||++++|+||++ |+|+++.. .+
T Consensus 174 ~~~~~l~~~~~~~~~~g~~~~~~~Q~~yn~~~~~~e~~l~~~~~~~gi~v~a~spL~~-G~Ltg~~~~~~~~~~~~~~~~ 252 (360)
T 2bp1_A 174 YASWEVAEICTLCKSNGWILPTVYQGMYNATTRQVETELFPCLRHFGLRFYAYNPLAG-GLLTGKYKYEDKDGKQPVGRF 252 (360)
T ss_dssp CCHHHHHHHHHHHHHHTCCCEEEEEEECBTTBCGGGTTHHHHHHHHTCEEEEECTTGG-GGGGTCCCGGGGTTTCCSBTT
T ss_pred CCHHHHHHHHHHHHHcCCCCceEEeeccchhhccchhhHHHHHHHcCCeEEEeccccc-CcccCCccCcCcccccccccc
Confidence 99999999887654 7899999999999876 6899999999999999999998 99987521 11
Q ss_pred --------------------ChHHHHHHHHH----hCCCcccccC
Q 025159 237 --------------------ECEVLKEIAEA----KGKTVAQVLI 257 (257)
Q Consensus 237 --------------------~~~~~~~ia~~----~~~s~~qval 257 (257)
..+.+.++|++ ||+|++|+||
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~~~~~~g~s~aqvaL 297 (360)
T 2bp1_A 253 FGNSWAETYRNRFWKEHHFEAIALVEKALQAAYGASAPSVTSAAL 297 (360)
T ss_dssp BSSTTHHHHHHHHCCHHHHHHHHHHHHHHHHHHGGGCCCHHHHHH
T ss_pred cccccchhhhhcccchhHHHHHHHHHHHHHHhhhhcCCCHHHHHH
Confidence 12688999999 9999999985
No 41
>3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=97.38 E-value=0.00012 Score=70.81 Aligned_cols=100 Identities=11% Similarity=0.017 Sum_probs=71.6
Q ss_pred HHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEE--ecCCCH---H-----
Q 025159 108 LQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIG--VSNFSC---K----- 177 (257)
Q Consensus 108 l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iG--vs~~~~---~----- 177 (257)
++.+|..|++||+|++ +|..+. ....+++++++++..+|+|+++| +|+++. .
T Consensus 231 ~e~sL~~L~~d~vdI~-I~Ghn~-----------------~~~~~iLeaa~~a~~~g~I~~iG~c~T~he~lr~~~~~~~ 292 (807)
T 3cf4_A 231 VEIGMGTIDKSKPFLC-VIGHNV-----------------AGVTYMMDYMEDNNLTDKMEIAGLCCTAIDLTRYKEADRR 292 (807)
T ss_dssp EEESGGGSCTTSCEEE-EESSCC-----------------HHHHHHHHHHHHTTCTTTSEEEEESHHHHHHTTTTCTTCC
T ss_pred eeccccccCCCCceEE-EECCcC-----------------ccHHHHHHHHHHCCCCCCCcEEeeccCCCchhhccccccc
Confidence 4567788999999994 775432 12468899999999999999994 454443 1
Q ss_pred -----------HHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCCC
Q 025159 178 -----------KLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTI 229 (257)
Q Consensus 178 -----------~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~l 229 (257)
...+.+....+ .+.++.|+...+ ++++.|.++|++|++.+|..+.|.+
T Consensus 293 ~~~~pv~G~~~~~~~~i~tGa~--dv~vV~~n~i~~--~ll~~a~~~Gm~Vit~sp~~~~Grp 351 (807)
T 3cf4_A 293 PPYAKVIGSMSKELKVIRSGMP--DVIVVDEQCVRG--DIVPEAQKLKIPVIASNPKIMYGLP 351 (807)
T ss_dssp CCCSEEEESGGGHHHHHHHTCC--SEEEECSSSCCT--THHHHHHHTTCCEEECSTTCCTTCC
T ss_pred cccccccccHHHHHHHhhcCCC--eEEEEEecCCCh--HHHHHHHHCCCEEEEechhhhcCCC
Confidence 23334454444 466677776553 6889999999999999999864654
No 42
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=92.82 E-value=1.9 Score=37.85 Aligned_cols=153 Identities=10% Similarity=0.042 Sum_probs=95.3
Q ss_pred CChhHHHHHHHHHHHcCCceeeCCCCCC--ChHHHHHHHHHHHhCCCCCCCCcEEEE-eccCCCCCChhhHHHHHHHHHH
Q 025159 37 SGSETTKLAILEAMKLGYRHFDTATLYQ--TEQPLGDAIAEALSTGIIKSRDELFIA-SKLWCSDAHRELVVPALQKSLE 113 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg--~e~~lg~~l~~~~~~~~~~~R~~l~i~-tK~~~~~~~~~~i~~~l~~sL~ 113 (257)
.+.++..+..+.+++.|++.|..--... .....=+++|+.+ -+++-|. ..... .++++...+ +-+.|+
T Consensus 141 ~~~e~~~~~a~~~~~~G~~~~KiKvG~~~~~d~~~v~avR~a~-------g~~~~l~~vDan~-~~~~~~A~~-~~~~l~ 211 (391)
T 3gd6_A 141 EEVESNLDVVRQKLEQGFDVFRLYVGKNLDADEEFLSRVKEEF-------GSRVRIKSYDFSH-LLNWKDAHR-AIKRLT 211 (391)
T ss_dssp THHHHHHHHHHHHHHTTCCEEEEECSSCHHHHHHHHHHHHHHH-------GGGCEEEEEECTT-CSCHHHHHH-HHHHHT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeeCCCHHHHHHHHHHHHHHc-------CCCCcEEEecCCC-CcCHHHHHH-HHHHHH
Confidence 3567778888888999999987543222 1222223455442 2455555 55432 334433322 233445
Q ss_pred hhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCCCcee
Q 025159 114 NLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAAN 193 (257)
Q Consensus 114 ~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~ 193 (257)
.+++ ++.++..|... +-++.+.++++.-.|.- |=+-++++.+.++++...++ ++
T Consensus 212 ~~~i---~~~~iEqP~~~--------------------~d~~~~~~l~~~~~iPI-dE~~~~~~~~~~~~~~~~~d--~v 265 (391)
T 3gd6_A 212 KYDL---GLEMIESPAPR--------------------NDFDGLYQLRLKTDYPI-SEHVWSFKQQQEMIKKDAID--IF 265 (391)
T ss_dssp TCCS---SCCEEECCSCT--------------------TCHHHHHHHHHHCSSCE-EEECCCHHHHHHHHHHTCCS--EE
T ss_pred hcCC---CcceecCCCCh--------------------hhHHHHHHHHHHcCCCc-CCCCCCHHHHHHHHHcCCCC--EE
Confidence 4443 33677776421 12567778887666654 99999999999999877665 67
Q ss_pred ccccCCCCC---cHHHHHHHHHCCceEEEecCCC
Q 025159 194 QVEMNPLWQ---QNKLREFCKAKDIQLAAYAPLG 224 (257)
Q Consensus 194 q~~~~~~~~---~~~~~~~~~~~gi~v~~~~pl~ 224 (257)
|+..+-+.- -..+.+.|+++|+.++..+.+.
T Consensus 266 ~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~e 299 (391)
T 3gd6_A 266 NISPVFIGGLTSAKKAAYAAEVASKDVVLGTTQE 299 (391)
T ss_dssp EECHHHHTSHHHHHHHHHHHHHTTCEEEECCCCC
T ss_pred EECchhcCCHHHHHHHHHHHHHcCCEEEecCCCc
Confidence 766544322 2678999999999999876553
No 43
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=91.95 E-value=3.4 Score=35.89 Aligned_cols=147 Identities=16% Similarity=0.096 Sum_probs=88.6
Q ss_pred ChhHHHHHHHHHHHcCCceeeCCCCCC-ChHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHhhC
Q 025159 38 GSETTKLAILEAMKLGYRHFDTATLYQ-TEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLENLQ 116 (257)
Q Consensus 38 ~~~~~~~~l~~Al~~Gi~~~DtA~~Yg-~e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~Lg 116 (257)
+.++..+....+.+.|++.|..-..-. ..+.+ +++|+. - +++-|..... ..++.+. .+-++ .|+.++
T Consensus 148 ~~~~~~~~a~~~~~~G~~~iKik~~~~~d~~~v-~avr~a-------~-~~~~l~vDan-~~~~~~~-~~~~~-~l~~~~ 215 (375)
T 1r0m_A 148 DEQATVDLVRRHVEQGYRRIKLKIKPGWDVQPV-RATREA-------F-PDIRLTVDAN-SAYTLAD-AGRLR-QLDEYD 215 (375)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEECBTTBSHHHH-HHHHHH-------C-TTSCEEEECT-TCCCGGG-HHHHH-TTGGGC
T ss_pred CHHHHHHHHHHHHHhcccEEEEecChHHHHHHH-HHHHHH-------c-CCCeEEEeCC-CCCCHHH-HHHHH-HHHhCC
Confidence 567777888888999999876422111 23333 556665 2 3444455542 3345565 43333 366665
Q ss_pred CCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe-eEEEecCCCHHHHHHHHHhCCCCCceecc
Q 025159 117 LEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT-KAIGVSNFSCKKLGDILATAKIPPAANQV 195 (257)
Q Consensus 117 ~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~p~~~q~ 195 (257)
+++ +..|... +-|+.+.+++++-.| -..|=+-++++.+.++++....+ ++|+
T Consensus 216 i~~-----iEqP~~~--------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d--~v~i 268 (375)
T 1r0m_A 216 LTY-----IEQPLAW--------------------DDLVDHAELARRIRTPLCLDESVASASDARKALALGAGG--VINL 268 (375)
T ss_dssp CSC-----EECCSCT--------------------TCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTSCS--EEEE
T ss_pred CcE-----EECCCCc--------------------ccHHHHHHHHHhCCCCEEecCccCCHHHHHHHHHhCCCC--EEEE
Confidence 544 4566321 124556666665444 34455567899999999876665 7777
Q ss_pred ccCCCCC---cHHHHHHHHHCCceEEEecCC
Q 025159 196 EMNPLWQ---QNKLREFCKAKDIQLAAYAPL 223 (257)
Q Consensus 196 ~~~~~~~---~~~~~~~~~~~gi~v~~~~pl 223 (257)
..+-+.- -..+.+.|+++|+.++..+-+
T Consensus 269 k~~~~GGit~~~~i~~~A~~~g~~~~~~~~~ 299 (375)
T 1r0m_A 269 KVARVGGHAESRRVHDVAQSFGAPVWCGGML 299 (375)
T ss_dssp CTTTTTSHHHHHHHHHHHHHTTCCEEECCCC
T ss_pred CcchhcCHHHHHHHHHHHHHcCCcEEecCcc
Confidence 6655432 267899999999996554433
No 44
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=91.35 E-value=6.4 Score=33.81 Aligned_cols=149 Identities=13% Similarity=0.099 Sum_probs=93.2
Q ss_pred CChhHHHHHHHHHHHcCCceeeCCCCCCChHHH---HHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHH
Q 025159 37 SGSETTKLAILEAMKLGYRHFDTATLYQTEQPL---GDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLE 113 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~~l---g~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~ 113 (257)
.+.++..+....+.+.|++.|..--..++.+.. =+++++.+ + +++-|..+.. ..++.+...+-++. |+
T Consensus 143 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~--g-----~~~~l~vDan-~~~~~~~a~~~~~~-l~ 213 (359)
T 1mdl_A 143 DGVKLATERAVTAAELGFRAVKTRIGYPALDQDLAVVRSIRQAV--G-----DDFGIMVDYN-QSLDVPAAIKRSQA-LQ 213 (359)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEEECCCSSHHHHHHHHHHHHHHH--C-----SSSEEEEECT-TCSCHHHHHHHHHH-HH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHh--C-----CCCEEEEECC-CCCCHHHHHHHHHH-HH
Confidence 356777778888889999998864332232222 22344431 2 3556666653 33455655554444 77
Q ss_pred hhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEE-ecCCCHHHHHHHHHhCCCCCce
Q 025159 114 NLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIG-VSNFSCKKLGDILATAKIPPAA 192 (257)
Q Consensus 114 ~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iG-vs~~~~~~l~~~~~~~~~~p~~ 192 (257)
.++++++ ..|.. .+-|+.+.++++.-.|--++ =+-++++.++++++....+ +
T Consensus 214 ~~~i~~i-----E~P~~--------------------~~~~~~~~~l~~~~~iPI~~de~~~~~~~~~~~i~~~~~d--~ 266 (359)
T 1mdl_A 214 QEGVTWI-----EEPTL--------------------QHDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGACR--L 266 (359)
T ss_dssp HHTCSCE-----ECCSC--------------------TTCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCS--E
T ss_pred HhCCCeE-----ECCCC--------------------hhhHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCC--E
Confidence 7887654 44421 12367777888776664444 3456889999998876655 7
Q ss_pred eccccCCCCC---cHHHHHHHHHCCceEEEec
Q 025159 193 NQVEMNPLWQ---QNKLREFCKAKDIQLAAYA 221 (257)
Q Consensus 193 ~q~~~~~~~~---~~~~~~~~~~~gi~v~~~~ 221 (257)
+|+..+-+.- -..+.+.|+++|+.++.++
T Consensus 267 v~ik~~~~GGi~~~~~i~~~A~~~g~~~~~~~ 298 (359)
T 1mdl_A 267 AMPDAMKIGGVTGWIRASALAQQFGIPMSSHL 298 (359)
T ss_dssp ECCBTTTTTHHHHHHHHHHHHHHTTCCBCCBS
T ss_pred EeecchhhCCHHHHHHHHHHHHHcCCeEeecc
Confidence 7776654332 2678999999999988764
No 45
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=90.99 E-value=7.2 Score=33.72 Aligned_cols=149 Identities=11% Similarity=0.078 Sum_probs=91.4
Q ss_pred ChhHHHHHHHHHHHcCCceeeCCCCCCChHH---HHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHh
Q 025159 38 GSETTKLAILEAMKLGYRHFDTATLYQTEQP---LGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLEN 114 (257)
Q Consensus 38 ~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~~---lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~ 114 (257)
+.++..+....+.+.|++.|..--..++-+. +=+++++.+ + +++-|..+.. ..++++...+-++ .|+.
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~--G-----~d~~l~vDan-~~~~~~~a~~~~~-~l~~ 216 (371)
T 2ovl_A 146 PVADLKTQADRFLAGGFRAIKMKVGRPDLKEDVDRVSALREHL--G-----DSFPLMVDAN-MKWTVDGAIRAAR-ALAP 216 (371)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCSSHHHHHHHHHHHHHHH--C-----TTSCEEEECT-TCSCHHHHHHHHH-HHGG
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHHHHHh--C-----CCCeEEEECC-CCCCHHHHHHHHH-HHHh
Confidence 6777888888889999999875433322111 223344432 2 3444555553 2345555554444 3777
Q ss_pred hCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEE-EecCCCHHHHHHHHHhCCCCCcee
Q 025159 115 LQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAI-GVSNFSCKKLGDILATAKIPPAAN 193 (257)
Q Consensus 115 Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~p~~~ 193 (257)
+++++ +..|... +-|+.+.++++.-.|--+ |=+-++++.++++++....+ ++
T Consensus 217 ~~i~~-----iEqP~~~--------------------~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d--~v 269 (371)
T 2ovl_A 217 FDLHW-----IEEPTIP--------------------DDLVGNARIVRESGHTIAGGENLHTLYDFHNAVRAGSLT--LP 269 (371)
T ss_dssp GCCSE-----EECCSCT--------------------TCHHHHHHHHHHHCSCEEECTTCCSHHHHHHHHHHTCCS--EE
T ss_pred cCCCE-----EECCCCc--------------------ccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCC--EE
Confidence 76653 4555321 125666666665445433 44556899999998877655 77
Q ss_pred ccccCCCCC---cHHHHHHHHHCCceEEEecC
Q 025159 194 QVEMNPLWQ---QNKLREFCKAKDIQLAAYAP 222 (257)
Q Consensus 194 q~~~~~~~~---~~~~~~~~~~~gi~v~~~~p 222 (257)
|+..+-+.- -..+.+.|+++|+.++.++.
T Consensus 270 ~ik~~~~GGi~~~~~i~~~A~~~gi~~~~h~~ 301 (371)
T 2ovl_A 270 EPDVSNIGGYTTFRKVAALAEANNMLLTSHGV 301 (371)
T ss_dssp CCCTTTTTSHHHHHHHHHHHHHTTCCEEECSC
T ss_pred eeCccccCCHHHHHHHHHHHHHcCCeEccccH
Confidence 776654432 26789999999999998753
No 46
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=90.61 E-value=3.9 Score=34.01 Aligned_cols=130 Identities=8% Similarity=-0.014 Sum_probs=82.5
Q ss_pred ChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEEecCCCHHHH
Q 025159 100 HRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGVSNFSCKKL 179 (257)
Q Consensus 100 ~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l 179 (257)
+.+.+.+..++.. .-|.|.||+-.--.. ....+.+...++.+++.-.+ -|.|-+++++.+
T Consensus 32 ~~~~a~~~a~~~v-~~GAdiIDIg~~s~~------------------~eE~~rv~~vi~~l~~~~~~-pisIDT~~~~v~ 91 (271)
T 2yci_X 32 DPRPIQEWARRQA-EKGAHYLDVNTGPTA------------------DDPVRVMEWLVKTIQEVVDL-PCCLDSTNPDAI 91 (271)
T ss_dssp CCHHHHHHHHHHH-HTTCSEEEEECCSCS------------------SCHHHHHHHHHHHHHHHCCC-CEEEECSCHHHH
T ss_pred CHHHHHHHHHHHH-HCCCCEEEEcCCcCc------------------hhHHHHHHHHHHHHHHhCCC-eEEEeCCCHHHH
Confidence 3455555555544 578888887653311 11356666667777665222 388899999999
Q ss_pred HHHHHhCCCCCceeccccCCCCCc--HHHHHHHHHCCceEEEecCCCCCCCCCCCCC----ccChHHHHHHHHHhCCCcc
Q 025159 180 GDILATAKIPPAANQVEMNPLWQQ--NKLREFCKAKDIQLAAYAPLGARGTIWGSNR----VMECEVLKEIAEAKGKTVA 253 (257)
Q Consensus 180 ~~~~~~~~~~p~~~q~~~~~~~~~--~~~~~~~~~~gi~v~~~~pl~~~G~l~~~~~----~~~~~~~~~ia~~~~~s~~ 253 (257)
++.++.+.-.+.+|-++ ... + .++++.|+++|.+++.+..-.. |. +.. ...-....+.|.++|+++.
T Consensus 92 ~aal~a~~Ga~iINdvs--~~~-d~~~~~~~~~a~~~~~vv~m~~d~~-G~---p~t~~~~~~~l~~~~~~a~~~Gi~~~ 164 (271)
T 2yci_X 92 EAGLKVHRGHAMINSTS--ADQ-WKMDIFFPMAKKYEAAIIGLTMNEK-GV---PKDANDRSQLAMELVANADAHGIPMT 164 (271)
T ss_dssp HHHHHHCCSCCEEEEEC--SCH-HHHHHHHHHHHHHTCEEEEESCBTT-BC---CCSHHHHHHHHHHHHHHHHHTTCCGG
T ss_pred HHHHHhCCCCCEEEECC--CCc-cccHHHHHHHHHcCCCEEEEecCCC-CC---CCCHHHHHHHHHHHHHHHHHCCCCcc
Confidence 99999865455566333 332 3 6799999999999999865212 32 111 1112455667788899877
Q ss_pred ccc
Q 025159 254 QVL 256 (257)
Q Consensus 254 qva 256 (257)
++.
T Consensus 165 ~Ii 167 (271)
T 2yci_X 165 ELY 167 (271)
T ss_dssp GEE
T ss_pred cEE
Confidence 664
No 47
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=90.51 E-value=4.4 Score=35.62 Aligned_cols=149 Identities=13% Similarity=0.043 Sum_probs=92.7
Q ss_pred hhHHHHHHHHHHHcCCceeeCCCCCCChHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHhhCCC
Q 025159 39 SETTKLAILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLENLQLE 118 (257)
Q Consensus 39 ~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~Lg~d 118 (257)
.++..+.++.+++.|++.|..--.-......=+++|+.+ | +++-|..... ..++.+. .+ +-+.|+.++++
T Consensus 164 ~e~~~~~a~~~~~~G~~~iKlKv~~~~d~~~v~avR~a~--G-----~~~~L~vDaN-~~w~~~~-~~-~~~~l~~~~i~ 233 (400)
T 3mwc_A 164 IETLIHQVEESLQEGYRRIKIKIKPGWDVEPLQETRRAV--G-----DHFPLWTDAN-SSFELDQ-WE-TFKAMDAAKCL 233 (400)
T ss_dssp HHHHHHHHHHHHHHTCSCEEEECBTTBSHHHHHHHHHHH--C-----TTSCEEEECT-TCCCGGG-HH-HHHHHGGGCCS
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeCcchHHHHHHHHHHhc--C-----CCCEEEEeCC-CCCCHHH-HH-HHHHHHhcCCC
Confidence 788888889999999998764322222223334566552 2 3333444442 2344555 33 34567776655
Q ss_pred cccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe-eEEEecCCCHHHHHHHHHhCCCCCceecccc
Q 025159 119 YIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT-KAIGVSNFSCKKLGDILATAKIPPAANQVEM 197 (257)
Q Consensus 119 ~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~ 197 (257)
+ +..|... +-++.+.++++.-.| -..|=+-++.+.+.++++...++ ++|...
T Consensus 234 ~-----iEqP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d--~v~~k~ 286 (400)
T 3mwc_A 234 F-----HEQPLHY--------------------EALLDLKELGERIETPICLDESLISSRVAEFVAKLGISN--IWNIKI 286 (400)
T ss_dssp C-----EESCSCT--------------------TCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHTTCCS--EEEECH
T ss_pred E-----EeCCCCh--------------------hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhcCCCC--EEEEcc
Confidence 4 4555321 125667777775444 34566778999999999876655 777665
Q ss_pred CCCC---CcHHHHHHHHHCCceEEEecCCC
Q 025159 198 NPLW---QQNKLREFCKAKDIQLAAYAPLG 224 (257)
Q Consensus 198 ~~~~---~~~~~~~~~~~~gi~v~~~~pl~ 224 (257)
+-+. .-..+.+.|+++|+.++..+.+.
T Consensus 287 ~~~GGit~~~~ia~~A~~~gi~~~~~~~~e 316 (400)
T 3mwc_A 287 QRVGGLLEAIKIYKIATDNGIKLWGGTMPE 316 (400)
T ss_dssp HHHTSHHHHHHHHHHHHHTTCEEEECCSCC
T ss_pred hhhCCHHHHHHHHHHHHHcCCEEEecCCCC
Confidence 4432 23678999999999998876553
No 48
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=90.18 E-value=6.3 Score=34.44 Aligned_cols=148 Identities=13% Similarity=0.041 Sum_probs=90.4
Q ss_pred ChhHHHHHHHHHHHcCCceeeCCCCCCChH---HHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHh
Q 025159 38 GSETTKLAILEAMKLGYRHFDTATLYQTEQ---PLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLEN 114 (257)
Q Consensus 38 ~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~---~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~ 114 (257)
+.++..+....+.+.|++.|..--..++-+ .+=+++|+.+ + +++-|..... ..++++...+-++. |+.
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~av--g-----~d~~l~vDan-~~~~~~~a~~~~~~-l~~ 232 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLKVGQPDGALDIARVTAVRKHL--G-----DAVPLMVDAN-QQWDRPTAQRMCRI-FEP 232 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCCSCHHHHHHHHHHHHHHH--C-----TTSCEEEECT-TCCCHHHHHHHHHH-HGG
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHc--C-----CCCEEEEECC-CCCCHHHHHHHHHH-HHh
Confidence 677888888889999999887533222211 1124445442 2 3444444543 34456665555544 777
Q ss_pred hCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEE-EecCCCHHHHHHHHHhCCCCCcee
Q 025159 115 LQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAI-GVSNFSCKKLGDILATAKIPPAAN 193 (257)
Q Consensus 115 Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~p~~~ 193 (257)
++++++ ..|... +-++.+.++++.-.|--+ +=+-++++.++++++....+ ++
T Consensus 233 ~~i~~i-----E~P~~~--------------------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d--~v 285 (393)
T 2og9_A 233 FNLVWI-----EEPLDA--------------------YDHEGHAALALQFDTPIATGEMLTSAAEHGDLIRHRAAD--YL 285 (393)
T ss_dssp GCCSCE-----ECCSCT--------------------TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCS--EE
T ss_pred hCCCEE-----ECCCCc--------------------ccHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHCCCCC--EE
Confidence 776654 444211 225666777766555433 44556899999998876655 66
Q ss_pred ccccCCCC---CcHHHHHHHHHCCceEEEec
Q 025159 194 QVEMNPLW---QQNKLREFCKAKDIQLAAYA 221 (257)
Q Consensus 194 q~~~~~~~---~~~~~~~~~~~~gi~v~~~~ 221 (257)
|+..+-+. .-..+.+.|+++|+.++.++
T Consensus 286 ~ik~~~~GGit~~~~i~~~A~~~gi~~~~h~ 316 (393)
T 2og9_A 286 MPDAPRVGGITPFLKIASLAEHAGLMLAPHF 316 (393)
T ss_dssp CCCHHHHTSHHHHHHHHHHHHHTTCEECCCS
T ss_pred eeCccccCCHHHHHHHHHHHHHcCCEEeccC
Confidence 66554322 23678999999999998664
No 49
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=89.80 E-value=9.5 Score=33.22 Aligned_cols=151 Identities=8% Similarity=-0.011 Sum_probs=91.0
Q ss_pred ChhHHHHHHHHHHHcCCceeeCCCCCCChHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHhhCC
Q 025159 38 GSETTKLAILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLENLQL 117 (257)
Q Consensus 38 ~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~Lg~ 117 (257)
+.++..+....+.+.|++.|..--..++-+..-+.++...+ . --+++-|..... ..++.+...+-++. |+..|
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~-a---~G~~~~l~vDan-~~~~~~~a~~~~~~-l~~~g- 217 (389)
T 2oz8_A 145 DDDAFVSLFSHAASIGYSAFKIKVGHRDFDRDLRRLELLKT-C---VPAGSKVMIDPN-EAWTSKEALTKLVA-IREAG- 217 (389)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHHHT-T---SCTTCEEEEECT-TCBCHHHHHHHHHH-HHHTT-
T ss_pred CHHHHHHHHHHHHHhCCCEEEEccCCCCHHHHHHHHHHHHH-h---hCCCCeEEEECC-CCCCHHHHHHHHHH-HHhcC-
Confidence 67888888888999999988754322232222233443311 1 114556666653 33455655555544 77632
Q ss_pred CcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcC-CeeEEEecCCCHHHHHHHHHhCCCCCceeccc
Q 025159 118 EYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLG-YTKAIGVSNFSCKKLGDILATAKIPPAANQVE 196 (257)
Q Consensus 118 d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G-~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~ 196 (257)
.++.++..|... +-|+.+.++++.- .|--++--+.+++.++++++....+ ++|+.
T Consensus 218 --~~i~~iEqP~~~--------------------~~~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~i~~~~~d--~v~ik 273 (389)
T 2oz8_A 218 --HDLLWVEDPILR--------------------HDHDGLRTLRHAVTWTQINSGEYLDLQGKRLLLEAHAAD--ILNVH 273 (389)
T ss_dssp --CCCSEEESCBCT--------------------TCHHHHHHHHHHCCSSEEEECTTCCHHHHHHHHHTTCCS--EEEEC
T ss_pred --CCceEEeCCCCC--------------------cCHHHHHHHHhhCCCCCEEeCCCCCHHHHHHHHHcCCCC--EEEEC
Confidence 234456666321 2356777777764 5544433333889999998876655 77776
Q ss_pred cCCCCCcHHHHHHHHHCCceEEEe
Q 025159 197 MNPLWQQNKLREFCKAKDIQLAAY 220 (257)
Q Consensus 197 ~~~~~~~~~~~~~~~~~gi~v~~~ 220 (257)
--+..-..+.+.|+++|+.++..
T Consensus 274 -GGit~a~~i~~~A~~~gi~~~~~ 296 (389)
T 2oz8_A 274 -GQVTDVMRIGWLAAELGIPISIG 296 (389)
T ss_dssp -SCHHHHHHHHHHHHHHTCCEEEC
T ss_pred -cCHHHHHHHHHHHHHcCCeEeec
Confidence 22222368899999999999988
No 50
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=89.74 E-value=9.3 Score=33.04 Aligned_cols=152 Identities=11% Similarity=0.058 Sum_probs=93.8
Q ss_pred CChhHHHHHHHHHHHcCCceeeCCCCCC--ChHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHh
Q 025159 37 SGSETTKLAILEAMKLGYRHFDTATLYQ--TEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLEN 114 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg--~e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~ 114 (257)
.+.++..+.++.+++.|++.|-.--... .+...=+++|+.+ + +++-|..... ..++.+...+ +-+.|+.
T Consensus 139 ~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~d~~~v~avR~~~--g-----~~~~l~vDaN-~~~~~~~A~~-~~~~l~~ 209 (368)
T 3q45_A 139 DEPHKMAADAVQIKKNGFEIIKVKVGGSKELDVERIRMIREAA--G-----DSITLRIDAN-QGWSVETAIE-TLTLLEP 209 (368)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHH--C-----SSSEEEEECT-TCBCHHHHHH-HHHHHGG
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEecCCHHHHHHHHHHHHHHh--C-----CCCeEEEECC-CCCChHHHHH-HHHHHhh
Confidence 3677888888888999999886433222 1222334455542 2 4445555542 3344443322 3345566
Q ss_pred hCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe-eEEEecCCCHHHHHHHHHhCCCCCcee
Q 025159 115 LQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT-KAIGVSNFSCKKLGDILATAKIPPAAN 193 (257)
Q Consensus 115 Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~p~~~ 193 (257)
+++++ +..|.. .+-++.+.++++.-.| -..|=+-++++.+.++++...++ ++
T Consensus 210 ~~i~~-----iEqP~~--------------------~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d--~v 262 (368)
T 3q45_A 210 YNIQH-----CEEPVS--------------------RNLYTALPKIRQACRIPIMADESCCNSFDAERLIQIQACD--SF 262 (368)
T ss_dssp GCCSC-----EECCBC--------------------GGGGGGHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCCS--EE
T ss_pred cCCCE-----EECCCC--------------------hhHHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCC--eE
Confidence 66544 455532 1224566677776554 34455678999999999876655 77
Q ss_pred ccccCCCCC---cHHHHHHHHHCCceEEEecCCC
Q 025159 194 QVEMNPLWQ---QNKLREFCKAKDIQLAAYAPLG 224 (257)
Q Consensus 194 q~~~~~~~~---~~~~~~~~~~~gi~v~~~~pl~ 224 (257)
|....-+.- -..+.+.|+++|+.++..+.+.
T Consensus 263 ~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~e 296 (368)
T 3q45_A 263 NLKLSKSAGITNALNIIRLAEQAHMPVQVGGFLE 296 (368)
T ss_dssp EECTTTTTSHHHHHHHHHHHHHTTCCEEECCSSC
T ss_pred EechhhcCCHHHHHHHHHHHHHcCCcEEecCccc
Confidence 777665432 2679999999999999877664
No 51
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=89.58 E-value=10 Score=33.23 Aligned_cols=150 Identities=14% Similarity=0.137 Sum_probs=91.2
Q ss_pred CChhHHHHHHHHHHHcCCceeeCCC------CC-----------C-C--h---HHHHH---HHHHHHhCCCCCCCCcEEE
Q 025159 37 SGSETTKLAILEAMKLGYRHFDTAT------LY-----------Q-T--E---QPLGD---AIAEALSTGIIKSRDELFI 90 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~Gi~~~DtA~------~Y-----------g-~--e---~~lg~---~l~~~~~~~~~~~R~~l~i 90 (257)
.+.++..+....+.+.|++.|..-. .| | + + +..-+ ++|+.+ + +++-|
T Consensus 149 ~~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v~avR~a~--G-----~d~~l 221 (410)
T 2gl5_A 149 VTPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREAM--G-----DDADI 221 (410)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHHHHHHH--C-----SSSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHHHHHHHhc--C-----CCCEE
Confidence 3678888888889999999887542 22 2 0 0 11122 233321 2 35556
Q ss_pred EeccCCCCCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEE-
Q 025159 91 ASKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAI- 169 (257)
Q Consensus 91 ~tK~~~~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~i- 169 (257)
..... ..++++...+-++. |+.+ ++.++..|... +-|+.+.++++.-.|--+
T Consensus 222 ~vDan-~~~~~~~ai~~~~~-l~~~-----~i~~iE~P~~~--------------------~~~~~~~~l~~~~~iPIa~ 274 (410)
T 2gl5_A 222 IVEIH-SLLGTNSAIQFAKA-IEKY-----RIFLYEEPIHP--------------------LNSDNMQKVSRSTTIPIAT 274 (410)
T ss_dssp EEECT-TCSCHHHHHHHHHH-HGGG-----CEEEEECSSCS--------------------SCHHHHHHHHHHCSSCEEE
T ss_pred EEECC-CCCCHHHHHHHHHH-HHhc-----CCCeEECCCCh--------------------hhHHHHHHHHhhCCCCEEe
Confidence 66653 33455554444433 5554 45567776321 225666777776555433
Q ss_pred EecCCCHHHHHHHHHhCCCCCceeccccCCCCC---cHHHHHHHHHCCceEEEecC
Q 025159 170 GVSNFSCKKLGDILATAKIPPAANQVEMNPLWQ---QNKLREFCKAKDIQLAAYAP 222 (257)
Q Consensus 170 Gvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~---~~~~~~~~~~~gi~v~~~~p 222 (257)
|=+-++++.++++++...++ ++|+..+-+.- -..+.+.|+++|+.++.++.
T Consensus 275 dE~~~~~~~~~~~i~~~~~d--~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 328 (410)
T 2gl5_A 275 GERSYTRWGYRELLEKQSIA--VAQPDLCLCGGITEGKKICDYANIYDTTVQVHVC 328 (410)
T ss_dssp CTTCCTTHHHHHHHHTTCCS--EECCCTTTTTHHHHHHHHHHHHHTTTCEECCCCC
T ss_pred cCCcCCHHHHHHHHHcCCCC--EEecCccccCCHHHHHHHHHHHHHcCCeEeecCC
Confidence 44456788999998876655 77776654322 26789999999999998765
No 52
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=89.18 E-value=4.6 Score=34.90 Aligned_cols=147 Identities=18% Similarity=0.096 Sum_probs=86.7
Q ss_pred ChhHHHHHHHHHHHcCCceeeCCCCCC-ChHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHhhC
Q 025159 38 GSETTKLAILEAMKLGYRHFDTATLYQ-TEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLENLQ 116 (257)
Q Consensus 38 ~~~~~~~~l~~Al~~Gi~~~DtA~~Yg-~e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~Lg 116 (257)
+.++..+....+.+.|++.|..-..-. ..+.+ +++|+. - +++.|..... ..++.+. .+ +-+.|+.++
T Consensus 141 ~~~~~~~~a~~~~~~G~~~iKik~~~~~d~~~v-~avr~a-------~-~~~~l~vDan-~~~~~~~-~~-~~~~l~~~~ 208 (369)
T 2zc8_A 141 SVEDTLRVVERHLEEGYRRIKLKIKPGWDYEVL-KAVREA-------F-PEATLTADAN-SAYSLAN-LA-QLKRLDELR 208 (369)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEECBTTBSHHHH-HHHHHH-------C-TTSCEEEECT-TCCCGGG-HH-HHHGGGGGC
T ss_pred CHHHHHHHHHHHHHhhhheeeeecChhHHHHHH-HHHHHH-------c-CCCeEEEecC-CCCCHHH-HH-HHHHHHhCC
Confidence 567777888888899999876422111 23333 566666 2 3333444432 2345555 43 333466655
Q ss_pred CCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCee-EEEecCCCHHHHHHHHHhCCCCCceecc
Q 025159 117 LEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTK-AIGVSNFSCKKLGDILATAKIPPAANQV 195 (257)
Q Consensus 117 ~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~p~~~q~ 195 (257)
++ ++..|... +-++.+.+++++-.|. ..|=+-++++.+.++++....+ ++|+
T Consensus 209 i~-----~iEqP~~~--------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d--~v~i 261 (369)
T 2zc8_A 209 LD-----YIEQPLAY--------------------DDLLDHAKLQRELSTPICLDESLTGAEKARKAIELGAGR--VFNV 261 (369)
T ss_dssp CS-----CEECCSCT--------------------TCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCS--EEEE
T ss_pred Cc-----EEECCCCc--------------------ccHHHHHHHHhhCCCCEEEcCccCCHHHHHHHHHhCCCC--EEEE
Confidence 54 45566321 1245566666654443 4455667899999999876655 6766
Q ss_pred ccCCCCC---cHHHHHHHHHCCceEEEecCC
Q 025159 196 EMNPLWQ---QNKLREFCKAKDIQLAAYAPL 223 (257)
Q Consensus 196 ~~~~~~~---~~~~~~~~~~~gi~v~~~~pl 223 (257)
..+-+.- -..+.+.|+++|+.++..+-+
T Consensus 262 k~~~~GGit~~~~i~~~A~~~g~~~~~~~~~ 292 (369)
T 2zc8_A 262 KPARLGGHGESLRVHALAESAGIPLWMGGML 292 (369)
T ss_dssp CHHHHTSHHHHHHHHHHHHHTTCCEEECCCC
T ss_pred chhhhCCHHHHHHHHHHHHHcCCcEEecCcc
Confidence 5543222 367899999999996554433
No 53
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=89.16 E-value=2.1 Score=36.66 Aligned_cols=124 Identities=14% Similarity=0.105 Sum_probs=81.0
Q ss_pred HHHHHHHHHHhhCCCcccEEEee-cCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEEec-----CCCHH
Q 025159 104 VVPALQKSLENLQLEYIDLYVIH-WPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGVS-----NFSCK 177 (257)
Q Consensus 104 i~~~l~~sL~~Lg~d~lDl~~lh-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs-----~~~~~ 177 (257)
+.+..++..+..|.|.||+-.-- +|... ....++..+.++.+.+.-.+ -|-|- +++++
T Consensus 82 ~~~~A~~~v~~~GAdiIDIg~eStrP~~~---------------~vs~ee~~~~V~~v~~~~~v-PlsIDg~~~~T~~~e 145 (323)
T 4djd_D 82 PGRWAQKCVAEYGADLIYLKLDGADPEGA---------------NHSVDQCVATVKEVLQAVGV-PLVVVGCGDVEKDHE 145 (323)
T ss_dssp HHHHHHHHHHTTCCSEEEEECGGGCTTTT---------------CCCHHHHHHHHHHHHHHCCS-CEEEECCSCHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEcCccCCCCCC---------------CCCHHHHHHHHHHHHhhCCc-eEEEECCCCCCCCHH
Confidence 33333333377898888875432 23211 23456666677777765222 36666 77899
Q ss_pred HHHHHHHhCC-CCCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCCCCCCCCccChHHHHHHHHHhCCCccccc
Q 025159 178 KLGDILATAK-IPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTIWGSNRVMECEVLKEIAEAKGKTVAQVL 256 (257)
Q Consensus 178 ~l~~~~~~~~-~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~l~~~~~~~~~~~~~~ia~~~~~s~~qva 256 (257)
.+++.++.+. .++.+|-+... ....+.+.|+++|.+++.++|... .....+.+.|.++|+++.++.
T Consensus 146 V~eaAleagag~~~lINsv~~~---~~~~m~~laa~~g~~vVlmh~~d~----------~~~~~l~~~a~~~GI~~e~II 212 (323)
T 4djd_D 146 VLEAVAEAAAGENLLLGNAEQE---NYKSLTAACMVHKHNIIARSPLDI----------NICKQLNILINEMNLPLDHIV 212 (323)
T ss_dssp HHHHHHHHTTTSCCEEEEEBTT---BCHHHHHHHHHHTCEEEEECSSCH----------HHHHHHHHHHHTTTCCGGGEE
T ss_pred HHHHHHHhcCCCCCeEEECCcc---cHHHHHHHHHHhCCeEEEEccchH----------HHHHHHHHHHHHcCCCHHHEE
Confidence 9999999875 45677755442 236799999999999999987421 123556677888898877664
No 54
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=89.16 E-value=5.2 Score=34.91 Aligned_cols=151 Identities=13% Similarity=0.080 Sum_probs=92.7
Q ss_pred ChhHHHHHHHHHHHcCCceeeCCCCCCC-h-HHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHhh
Q 025159 38 GSETTKLAILEAMKLGYRHFDTATLYQT-E-QPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLENL 115 (257)
Q Consensus 38 ~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~-e-~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~L 115 (257)
+.++..+..+.+.+.|++.|..--...+ + ..+=+++++.+ + +++-|..+.. ..++.+...+-++. |+.+
T Consensus 164 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~e~v~avr~a~--g-----~d~~l~vDan-~~~~~~~a~~~~~~-l~~~ 234 (388)
T 2nql_A 164 TLKARGELAKYWQDRGFNAFKFATPVADDGPAAEIANLRQVL--G-----PQAKIAADMH-WNQTPERALELIAE-MQPF 234 (388)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEGGGCTTCHHHHHHHHHHHH--C-----TTSEEEEECC-SCSCHHHHHHHHHH-HGGG
T ss_pred CHHHHHHHHHHHHHhCCCEEEEeCCCCChHHHHHHHHHHHHh--C-----CCCEEEEECC-CCCCHHHHHHHHHH-Hhhc
Confidence 6777888888899999998874321111 1 12222344431 2 3556666653 34455655555543 7777
Q ss_pred CCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEE-ecCCCHHHHHHHHHhCCCCCceec
Q 025159 116 QLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIG-VSNFSCKKLGDILATAKIPPAANQ 194 (257)
Q Consensus 116 g~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iG-vs~~~~~~l~~~~~~~~~~p~~~q 194 (257)
+++++ ..|.. .+-|+.+.++++.-.|--++ =+-++++.++++++....+ ++|
T Consensus 235 ~i~~i-----EqP~~--------------------~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d--~v~ 287 (388)
T 2nql_A 235 DPWFA-----EAPVW--------------------TEDIAGLEKVSKNTDVPIAVGEEWRTHWDMRARIERCRIA--IVQ 287 (388)
T ss_dssp CCSCE-----ECCSC--------------------TTCHHHHHHHHTSCCSCEEECTTCCSHHHHHHHHTTSCCS--EEC
T ss_pred CCCEE-----ECCCC--------------------hhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCC--EEE
Confidence 76654 44421 12367777888766664444 3455889999998876555 666
Q ss_pred cccCC--CCCcHHHHHHHHHCCceEEEecCCC
Q 025159 195 VEMNP--LWQQNKLREFCKAKDIQLAAYAPLG 224 (257)
Q Consensus 195 ~~~~~--~~~~~~~~~~~~~~gi~v~~~~pl~ 224 (257)
+..+- +..-..+.+.|+++|+.++.++-+.
T Consensus 288 ik~~~GGit~~~~i~~~A~~~g~~~~~h~~~e 319 (388)
T 2nql_A 288 PEMGHKGITNFIRIGALAAEHGIDVIPHATVG 319 (388)
T ss_dssp CCHHHHCHHHHHHHHHHHHHHTCEECCCCCSS
T ss_pred ecCCCCCHHHHHHHHHHHHHcCCeEEeecCCC
Confidence 65443 1112578899999999999875443
No 55
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=88.90 E-value=11 Score=32.56 Aligned_cols=151 Identities=13% Similarity=0.053 Sum_probs=93.6
Q ss_pred ChhHHHHHHHHHHH-cCCceeeCCCCCCChH---HHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHH
Q 025159 38 GSETTKLAILEAMK-LGYRHFDTATLYQTEQ---PLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLE 113 (257)
Q Consensus 38 ~~~~~~~~l~~Al~-~Gi~~~DtA~~Yg~e~---~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~ 113 (257)
+.++..+....+.+ .|++.|..--..++.+ ..=+++|+.+ -+++-|..+.. ..++.+...+-++ .|+
T Consensus 142 ~~e~~~~~a~~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~-------g~~~~l~vDan-~~~~~~~a~~~~~-~l~ 212 (370)
T 1nu5_A 142 DTARDIDSALEMIETRRHNRFKVKLGARTPAQDLEHIRSIVKAV-------GDRASVRVDVN-QGWDEQTASIWIP-RLE 212 (370)
T ss_dssp CHHHHHHHHHHHHHTTSCSEEEEECSSSCHHHHHHHHHHHHHHH-------GGGCEEEEECT-TCCCHHHHHHHHH-HHH
T ss_pred CHHHHHHHHHHHHHhCCccEEEEecCCCChHHHHHHHHHHHHhc-------CCCCEEEEECC-CCCCHHHHHHHHH-HHH
Confidence 56777788888888 9999987543332211 2223344432 13555666653 2345555554443 577
Q ss_pred hhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeE-EEecCCCHHHHHHHHHhCCCCCce
Q 025159 114 NLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKA-IGVSNFSCKKLGDILATAKIPPAA 192 (257)
Q Consensus 114 ~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~-iGvs~~~~~~l~~~~~~~~~~p~~ 192 (257)
.+++++ +..|... +-|+.+.++++.-.|-- .|=+-++++.+.++++....+ +
T Consensus 213 ~~~i~~-----iEqP~~~--------------------~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d--~ 265 (370)
T 1nu5_A 213 EAGVEL-----VEQPVPR--------------------ANFGALRRLTEQNGVAILADESLSSLSSAFELARDHAVD--A 265 (370)
T ss_dssp HHTCCE-----EECCSCT--------------------TCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHTTCCS--E
T ss_pred hcCcce-----EeCCCCc--------------------ccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCC--E
Confidence 777654 4555321 23566777777655533 344567899999999876655 6
Q ss_pred eccccCCCCC---cHHHHHHHHHCCceEEEecCCC
Q 025159 193 NQVEMNPLWQ---QNKLREFCKAKDIQLAAYAPLG 224 (257)
Q Consensus 193 ~q~~~~~~~~---~~~~~~~~~~~gi~v~~~~pl~ 224 (257)
+|+..+-+.- -..+.+.|+++|+.++..+.+.
T Consensus 266 v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~e 300 (370)
T 1nu5_A 266 FSLKLCNMGGIANTLKVAAVAEAAGISSYGGTMLD 300 (370)
T ss_dssp EEECHHHHTSHHHHHHHHHHHHHHTCEEEECCSSC
T ss_pred EEEchhhcCCHHHHHHHHHHHHHcCCcEEecCCcc
Confidence 7666543322 2678999999999999887654
No 56
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=88.81 E-value=9.5 Score=33.37 Aligned_cols=147 Identities=16% Similarity=0.094 Sum_probs=90.1
Q ss_pred ChhHHHHHHHHHHHcCCceeeCCCCCCC----hHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHH
Q 025159 38 GSETTKLAILEAMKLGYRHFDTATLYQT----EQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLE 113 (257)
Q Consensus 38 ~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~----e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~ 113 (257)
+.++..+....+.+.|++.|..--..++ .+.+ +++++.+ + +++-|..... ..++.+...+-++. |+
T Consensus 175 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v-~avR~av--G-----~d~~l~vDan-~~~~~~~ai~~~~~-l~ 244 (398)
T 2pp0_A 175 PLDQVLKNVVISRENGIGGIKLKVGQPNCAEDIRRL-TAVREAL--G-----DEFPLMVDAN-QQWDRETAIRMGRK-ME 244 (398)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCSCHHHHHHHH-HHHHHHH--C-----SSSCEEEECT-TCSCHHHHHHHHHH-HG
T ss_pred CHHHHHHHHHHHHHhCCCeEEEecCCCCHHHHHHHH-HHHHHHc--C-----CCCeEEEECC-CCCCHHHHHHHHHH-HH
Confidence 6777888888899999998875322222 2222 3445442 2 3444455543 33455655555544 77
Q ss_pred hhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEE-EecCCCHHHHHHHHHhCCCCCce
Q 025159 114 NLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAI-GVSNFSCKKLGDILATAKIPPAA 192 (257)
Q Consensus 114 ~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~p~~ 192 (257)
.+++++ +..|... +-|+.+.++++.-.|--+ |=+-++++.++++++....+ +
T Consensus 245 ~~~i~~-----iEqP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d--~ 297 (398)
T 2pp0_A 245 QFNLIW-----IEEPLDA--------------------YDIEGHAQLAAALDTPIATGEMLTSFREHEQLILGNASD--F 297 (398)
T ss_dssp GGTCSC-----EECCSCT--------------------TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCS--E
T ss_pred HcCCce-----eeCCCCh--------------------hhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCC--E
Confidence 777654 4555321 225666777766555433 44556889999998876655 6
Q ss_pred eccccCCCC---CcHHHHHHHHHCCceEEEec
Q 025159 193 NQVEMNPLW---QQNKLREFCKAKDIQLAAYA 221 (257)
Q Consensus 193 ~q~~~~~~~---~~~~~~~~~~~~gi~v~~~~ 221 (257)
+|+..+-+. .-..+.+.|+++|+.++.++
T Consensus 298 v~ik~~~~GGite~~~i~~~A~~~gi~~~~h~ 329 (398)
T 2pp0_A 298 VQPDAPRVGGISPFLKIMDLAAKHGRKLAPHF 329 (398)
T ss_dssp ECCCHHHHTSHHHHHHHHHHHHHTTCEECCCS
T ss_pred EEeCccccCCHHHHHHHHHHHHHcCCeEeecC
Confidence 666554322 23679999999999998664
No 57
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=88.65 E-value=11 Score=32.85 Aligned_cols=150 Identities=11% Similarity=0.041 Sum_probs=92.8
Q ss_pred ChhHHHHHHHHHHHcCCceeeCCCCCCC---hHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHh
Q 025159 38 GSETTKLAILEAMKLGYRHFDTATLYQT---EQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLEN 114 (257)
Q Consensus 38 ~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~---e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~ 114 (257)
+.++..+.++.+++.|++.|-.--.... +...=+++|+. - +++-|...... .++++...+ +-+.|+.
T Consensus 148 ~~~~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a-------~-~~~~l~vDan~-~~~~~~A~~-~~~~L~~ 217 (385)
T 3i6e_A 148 DFDADIALMERLRADGVGLIKLKTGFRDHAFDIMRLELIARD-------F-PEFRVRVDYNQ-GLEIDEAVP-RVLDVAQ 217 (385)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEECSSSCHHHHHHHHHHHHHH-------C-TTSEEEEECTT-CCCGGGHHH-HHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHh-------C-CCCeEEEECCC-CCCHHHHHH-HHHHHHh
Confidence 5566667778888999998864332221 22233456665 3 55556666533 334444333 3345666
Q ss_pred hCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe-eEEEecCCCHHHHHHHHHhCCCCCcee
Q 025159 115 LQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT-KAIGVSNFSCKKLGDILATAKIPPAAN 193 (257)
Q Consensus 115 Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~p~~~ 193 (257)
+++++ +..|... +-++.+.+++++-.| -..|=+-++...+.++++...++ ++
T Consensus 218 ~~i~~-----iEqP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d--~v 270 (385)
T 3i6e_A 218 FQPDF-----IEQPVRA--------------------HHFELMARLRGLTDVPLLADESVYGPEDMVRAAHEGICD--GV 270 (385)
T ss_dssp TCCSC-----EECCSCT--------------------TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCS--EE
T ss_pred cCCCE-----EECCCCc--------------------ccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHcCCCC--EE
Confidence 66544 4555321 125677788776555 35566778999999998877655 67
Q ss_pred ccccCCCC---CcHHHHHHHHHCCceEEEecCCC
Q 025159 194 QVEMNPLW---QQNKLREFCKAKDIQLAAYAPLG 224 (257)
Q Consensus 194 q~~~~~~~---~~~~~~~~~~~~gi~v~~~~pl~ 224 (257)
|....-+. .-..+.+.|+++|+.++..+.+.
T Consensus 271 ~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~e 304 (385)
T 3i6e_A 271 SIKIMKSGGLTRAQTVARIAAAHGLMAYGGDMFE 304 (385)
T ss_dssp EECHHHHTSHHHHHHHHHHHHHTTCEEEECCCSC
T ss_pred EecccccCCHHHHHHHHHHHHHcCCEEEeCCCCc
Confidence 66654332 23678999999999998765554
No 58
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=88.05 E-value=13 Score=32.41 Aligned_cols=154 Identities=11% Similarity=0.080 Sum_probs=91.0
Q ss_pred CChhHHHHHHHHHHHcCCceeeCCCC------------CC--ChHHHH---HHHHHHHhCCCCCCCCcEEEEeccCCCCC
Q 025159 37 SGSETTKLAILEAMKLGYRHFDTATL------------YQ--TEQPLG---DAIAEALSTGIIKSRDELFIASKLWCSDA 99 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~Gi~~~DtA~~------------Yg--~e~~lg---~~l~~~~~~~~~~~R~~l~i~tK~~~~~~ 99 (257)
.+.++..+....+.+.|++.|..-.. || .+..+. +.++...+. --+++-|..... ..+
T Consensus 136 ~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a----~G~d~~l~vD~n-~~~ 210 (392)
T 2poz_A 136 DTPDEFARAVERPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDA----AGPEIELMVDLS-GGL 210 (392)
T ss_dssp CSHHHHHHHTHHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHH----HCTTSEEEEECT-TCS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHh----cCCCCEEEEECC-CCC
Confidence 46778888888899999998874322 32 112222 222222110 113555666653 234
Q ss_pred ChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEE-ecCCCHHH
Q 025159 100 HRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIG-VSNFSCKK 178 (257)
Q Consensus 100 ~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iG-vs~~~~~~ 178 (257)
+++...+-++. |+.+ ++.++..|... +-|+.+.++++.-.|--++ =+-++++.
T Consensus 211 ~~~~a~~~~~~-l~~~-----~i~~iE~P~~~--------------------~~~~~~~~l~~~~~ipIa~dE~~~~~~~ 264 (392)
T 2poz_A 211 TTDETIRFCRK-IGEL-----DICFVEEPCDP--------------------FDNGALKVISEQIPLPIAVGERVYTRFG 264 (392)
T ss_dssp CHHHHHHHHHH-HGGG-----CEEEEECCSCT--------------------TCHHHHHHHHHHCSSCEEECTTCCHHHH
T ss_pred CHHHHHHHHHH-HHhc-----CCCEEECCCCc--------------------ccHHHHHHHHhhCCCCEEecCCcCCHHH
Confidence 55544444333 5544 45566766321 2256677777765564443 34456888
Q ss_pred HHHHHHhCCCCCceeccccCCCCC---cHHHHHHHHHCCceEEEecCC
Q 025159 179 LGDILATAKIPPAANQVEMNPLWQ---QNKLREFCKAKDIQLAAYAPL 223 (257)
Q Consensus 179 l~~~~~~~~~~p~~~q~~~~~~~~---~~~~~~~~~~~gi~v~~~~pl 223 (257)
++++++....+ ++|+..+-+.- -..+.+.|+++|+.++.++..
T Consensus 265 ~~~~i~~~~~d--~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h~~~ 310 (392)
T 2poz_A 265 FRKIFELQACG--IIQPDIGTAGGLMETKKICAMAEAYNMRVAPHVCG 310 (392)
T ss_dssp HHHHHTTTCCS--EECCCTTTSSCHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred HHHHHHcCCCC--EEecCccccCCHHHHHHHHHHHHHcCCeEecCCCC
Confidence 99988766555 77776654332 268899999999999887654
No 59
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=88.01 E-value=13 Score=32.49 Aligned_cols=150 Identities=16% Similarity=0.113 Sum_probs=92.0
Q ss_pred ChhHHHHHHHHHHHcCCceeeCCCC----CCC-----------h---HHHHH---HHHHHHhCCCCCCCCcEEEEeccCC
Q 025159 38 GSETTKLAILEAMKLGYRHFDTATL----YQT-----------E---QPLGD---AIAEALSTGIIKSRDELFIASKLWC 96 (257)
Q Consensus 38 ~~~~~~~~l~~Al~~Gi~~~DtA~~----Yg~-----------e---~~lg~---~l~~~~~~~~~~~R~~l~i~tK~~~ 96 (257)
+.++..+....+.+.|++.|..-.. +|. + +..-+ ++|+.+ + +++-|.....
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~~~~~~~~~~~~~e~v~avR~a~--G-----~d~~l~vDan- 223 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQNLNGPLTDKILRLGYDRMAAIRDAV--G-----PDVDIIAEMH- 223 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCSCCCSSCCHHHHHHHHHHHHHHHHHH--C-----TTSEEEEECT-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccCCcCccccCcccCCCchhHHHHHHHHHHHHHHhc--C-----CCCEEEEECC-
Confidence 6788888888899999998875321 221 1 11112 233321 2 3566666653
Q ss_pred CCCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEE-EecCCC
Q 025159 97 SDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAI-GVSNFS 175 (257)
Q Consensus 97 ~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~i-Gvs~~~ 175 (257)
..++++...+-++. |+.+++++ +..|... +-|+.+.++++.-.|--+ |=+-++
T Consensus 224 ~~~~~~~a~~~~~~-l~~~~i~~-----iE~P~~~--------------------~~~~~~~~l~~~~~iPIa~dE~~~~ 277 (407)
T 2o56_A 224 AFTDTTSAIQFGRM-IEELGIFY-----YEEPVMP--------------------LNPAQMKQVADKVNIPLAAGERIYW 277 (407)
T ss_dssp TCSCHHHHHHHHHH-HGGGCCSC-----EECSSCS--------------------SSHHHHHHHHHHCCSCEEECTTCCH
T ss_pred CCCCHHHHHHHHHH-HHhcCCCE-----EeCCCCh--------------------hhHHHHHHHHHhCCCCEEeCCCcCC
Confidence 34455655555543 77776654 4555321 225666777766555433 334557
Q ss_pred HHHHHHHHHhCCCCCceeccccCCCCC---cHHHHHHHHHCCceEEEecCC
Q 025159 176 CKKLGDILATAKIPPAANQVEMNPLWQ---QNKLREFCKAKDIQLAAYAPL 223 (257)
Q Consensus 176 ~~~l~~~~~~~~~~p~~~q~~~~~~~~---~~~~~~~~~~~gi~v~~~~pl 223 (257)
++.++++++....+ ++|+..+-+.- -..+.+.|+++|+.++.++..
T Consensus 278 ~~~~~~~i~~~~~d--~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~~ 326 (407)
T 2o56_A 278 RWGYRPFLENGSLS--VIQPDICTCGGITEVKKICDMAHVYDKTVQIHVCG 326 (407)
T ss_dssp HHHHHHHHHTTCCS--EECCCTTTTTHHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred HHHHHHHHHcCCCC--EEecCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 88899998876655 77776654322 267899999999999987664
No 60
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=88.01 E-value=8.9 Score=33.04 Aligned_cols=150 Identities=15% Similarity=0.146 Sum_probs=88.9
Q ss_pred ChhHHHHHHHHHHHcCCceeeCCCCCCChH---HHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHH-HHHHHHHH
Q 025159 38 GSETTKLAILEAMKLGYRHFDTATLYQTEQ---PLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVV-PALQKSLE 113 (257)
Q Consensus 38 ~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~---~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~-~~l~~sL~ 113 (257)
+.++..+....+.+.|++.|..--.. +-+ .+=+++++.+ + +++-|..+.. ..++.+... +-++ .|+
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~iKik~g~-~~~~~~e~v~avr~a~--g-----~~~~l~vDan-~~~~~~~a~~~~~~-~l~ 210 (369)
T 2p8b_A 141 DPENMAEEAASMIQKGYQSFKMKVGT-NVKEDVKRIEAVRERV--G-----NDIAIRVDVN-QGWKNSANTLTALR-SLG 210 (369)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCS-CHHHHHHHHHHHHHHH--C-----TTSEEEEECT-TTTBSHHHHHHHHH-TST
T ss_pred ChHHHHHHHHHHHHcCcCEEEEEeCC-CHHHHHHHHHHHHHHh--C-----CCCeEEEECC-CCCCHHHHHHHHHH-HHH
Confidence 56777788888899999998753221 211 1223344431 2 3455555553 233444433 3222 244
Q ss_pred hhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEE-EecCCCHHHHHHHHHhCCCCCce
Q 025159 114 NLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAI-GVSNFSCKKLGDILATAKIPPAA 192 (257)
Q Consensus 114 ~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~p~~ 192 (257)
.++++ ++..|.. .+-|+.+.++++.-.|--+ |=+-++++.+.++++....+ +
T Consensus 211 ~~~i~-----~iEqP~~--------------------~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d--~ 263 (369)
T 2p8b_A 211 HLNID-----WIEQPVI--------------------ADDIDAMAHIRSKTDLPLMIDEGLKSSREMRQIIKLEAAD--K 263 (369)
T ss_dssp TSCCS-----CEECCBC--------------------TTCHHHHHHHHHTCCSCEEESTTCCSHHHHHHHHHHTCCS--E
T ss_pred hCCCc-----EEECCCC--------------------cccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCC--E
Confidence 44444 4555521 1236677778776555433 44556899999998876655 6
Q ss_pred eccccCCCCC---cHHHHHHHHHCCceEEEecCCC
Q 025159 193 NQVEMNPLWQ---QNKLREFCKAKDIQLAAYAPLG 224 (257)
Q Consensus 193 ~q~~~~~~~~---~~~~~~~~~~~gi~v~~~~pl~ 224 (257)
+|+..+-+.- -..+.+.|+++|+.++..+.+.
T Consensus 264 v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~e 298 (369)
T 2p8b_A 264 VNIKLMKCGGIYPAVKLAHQAEMAGIECQVGSMVE 298 (369)
T ss_dssp EEECHHHHTSHHHHHHHHHHHHHTTCEEEECCSSC
T ss_pred EEeecchhCCHHHHHHHHHHHHHcCCcEEecCCCc
Confidence 6665543222 2578999999999998877653
No 61
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=87.76 E-value=15 Score=32.81 Aligned_cols=96 Identities=9% Similarity=0.060 Sum_probs=62.0
Q ss_pred CChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcC-CeeEEEe--cCCC
Q 025159 99 AHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLG-YTKAIGV--SNFS 175 (257)
Q Consensus 99 ~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G-~ir~iGv--s~~~ 175 (257)
.+++.+.+-..+.++.. ++++|..|-+... |+.+.+|.+.- +|.-+|= ...+
T Consensus 279 ~t~~elid~y~~lle~y-----pI~~IEDPl~~dD--------------------~eg~a~Lt~~lg~i~IvGDEl~vTn 333 (441)
T 3qtp_A 279 KDVDGLIAEYVDYGKHY-----PIASIEDPFAEDD--------------------WAAWNKFTVEHGNFQIVGDDLLVTN 333 (441)
T ss_dssp ECHHHHHHHHHHHHHHS-----CEEEEESCSCTTC--------------------HHHHHHHHHHTTTSEEEESTTTTTC
T ss_pred cCHHHHHHHHHHHhhhc-----ceeeecCCCChHH--------------------HHHHHHHHHhcCCceEEeccccccC
Confidence 35666666666666643 5889998854321 34444444432 6776773 3457
Q ss_pred HHHHHHHHHhCCCCCceeccccCCCCC---cHHHHHHHHHCCceEEEec
Q 025159 176 CKKLGDILATAKIPPAANQVEMNPLWQ---QNKLREFCKAKDIQLAAYA 221 (257)
Q Consensus 176 ~~~l~~~~~~~~~~p~~~q~~~~~~~~---~~~~~~~~~~~gi~v~~~~ 221 (257)
++.+.++++..... ++|+..+-+.. ..++...|+++|++++.-+
T Consensus 334 ~~~i~~~Ie~~a~n--~IlIKvnqiGGITEalkaa~lA~~~G~~vmvsH 380 (441)
T 3qtp_A 334 PARVQMAMDKNACN--SVLIKVNQIGTLTETFKTIKMAQEKGWGVMASH 380 (441)
T ss_dssp HHHHHHHHHHTCCS--EEEECGGGTCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHcCCCC--EEEecccccccHHHHHHHHHHHHHcCCeEEEeC
Confidence 99999998876655 55555554332 2578899999999987533
No 62
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=87.60 E-value=14 Score=32.25 Aligned_cols=150 Identities=11% Similarity=0.083 Sum_probs=92.5
Q ss_pred CChhHHHHHHHHHHHcCCceeeCCCCCCChHHHH---HHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHH
Q 025159 37 SGSETTKLAILEAMKLGYRHFDTATLYQTEQPLG---DAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLE 113 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~~lg---~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~ 113 (257)
.+.++..+....+.+.|++.|..-....+.+..- +++|+.+ + +++-|..+.. ..++.+...+-++. |+
T Consensus 148 ~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a~--G-----~d~~l~vDan-~~~~~~~a~~~~~~-l~ 218 (391)
T 2qgy_A 148 KDTNDYLRQIEKFYGKKYGGIKIYPMLDSLSISIQFVEKVREIV--G-----DELPLMLDLA-VPEDLDQTKSFLKE-VS 218 (391)
T ss_dssp CCHHHHHHHHHHHHHTTCSCEEECCCCSSHHHHHHHHHHHHHHH--C-----SSSCEEEECC-CCSCHHHHHHHHHH-HG
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEccCCChHHHHHHHHHHHHHHh--C-----CCCEEEEEcC-CCCCHHHHHHHHHH-HH
Confidence 4677888888889999999887542222112222 2334331 2 3455555653 23455555554444 77
Q ss_pred hhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEE-EecCCCHHHHHHHHHhCCCCCce
Q 025159 114 NLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAI-GVSNFSCKKLGDILATAKIPPAA 192 (257)
Q Consensus 114 ~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~p~~ 192 (257)
.+++++ +..|.. .+-|+.+.++++.-.|--+ +=+-++++.++++++....+ +
T Consensus 219 ~~~i~~-----iEqP~~--------------------~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d--~ 271 (391)
T 2qgy_A 219 SFNPYW-----IEEPVD--------------------GENISLLTEIKNTFNMKVVTGEKQSGLVHFRELISRNAAD--I 271 (391)
T ss_dssp GGCCSE-----EECSSC--------------------TTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCS--E
T ss_pred hcCCCe-----EeCCCC--------------------hhhHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCC--E
Confidence 777654 455522 1225667777776555433 44556889999999876655 7
Q ss_pred eccccCCCCC---cHHHHHHHHHCCceEEEecC
Q 025159 193 NQVEMNPLWQ---QNKLREFCKAKDIQLAAYAP 222 (257)
Q Consensus 193 ~q~~~~~~~~---~~~~~~~~~~~gi~v~~~~p 222 (257)
+|+..+-+.- -..+.+.|+++|+.++..+.
T Consensus 272 v~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~ 304 (391)
T 2qgy_A 272 FNPDISGMGGLIDIIEISNEASNNGIFISPHCW 304 (391)
T ss_dssp ECCBTTTSSCHHHHHHHHHHHHHTTCEECCBCC
T ss_pred EEECcchhCCHHHHHHHHHHHHHCCCEEeccCC
Confidence 7776654332 25789999999999998865
No 63
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=87.44 E-value=13 Score=31.93 Aligned_cols=148 Identities=14% Similarity=0.150 Sum_probs=89.1
Q ss_pred ChhHHHHHHHHHHHcCCceeeCCCCCC-ChHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHhhC
Q 025159 38 GSETTKLAILEAMKLGYRHFDTATLYQ-TEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLENLQ 116 (257)
Q Consensus 38 ~~~~~~~~l~~Al~~Gi~~~DtA~~Yg-~e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~Lg 116 (257)
+.++..+....+.+.|++.|-.-..-. ..+.+. ++++.+ + +++-|..... ..++.+. .+-+ +.|+.++
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~e~v~-avr~~~--g-----~~~~l~vDan-~~~~~~~-~~~~-~~l~~~~ 209 (368)
T 1sjd_A 141 TIPQLLDVVGGYLDEGYVRIKLKIEPGWDVEPVR-AVRERF--G-----DDVLLQVDAN-TAYTLGD-APQL-ARLDPFG 209 (368)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECBTTBSHHHHH-HHHHHH--C-----TTSEEEEECT-TCCCGGG-HHHH-HTTGGGC
T ss_pred CHHHHHHHHHHHHHhCccEEEEecCchhHHHHHH-HHHHhc--C-----CCceEEEecc-CCCCHHH-HHHH-HHHHhcC
Confidence 567777888888899999876422111 233333 445442 2 2333444432 3345566 4433 3366666
Q ss_pred CCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCee-EEEecCCCHHHHHHHHHhCCCCCceecc
Q 025159 117 LEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTK-AIGVSNFSCKKLGDILATAKIPPAANQV 195 (257)
Q Consensus 117 ~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~p~~~q~ 195 (257)
++ ++..|... +-++.+.++++.-.|- ..|=+-++++.++++++....+ ++|+
T Consensus 210 i~-----~iE~P~~~--------------------~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d--~v~i 262 (368)
T 1sjd_A 210 LL-----LIEQPLEE--------------------EDVLGHAELARRIQTPICLDESIVSARAAADAIKLGAVQ--IVNI 262 (368)
T ss_dssp CS-----EEECCSCT--------------------TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTTCCS--EEEE
T ss_pred CC-----eEeCCCCh--------------------hhHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCC--EEEe
Confidence 55 45666321 2356777777765543 3344567899999999876655 7777
Q ss_pred ccCCCCC---cHHHHHHHHHCCceEEEecCC
Q 025159 196 EMNPLWQ---QNKLREFCKAKDIQLAAYAPL 223 (257)
Q Consensus 196 ~~~~~~~---~~~~~~~~~~~gi~v~~~~pl 223 (257)
..+-+.- -..+.+.|+++|+.++..+-+
T Consensus 263 k~~~~GGit~~~~i~~~A~~~g~~~~~~~~~ 293 (368)
T 1sjd_A 263 KPGRVGGYLEARRVHDVCAAHGIPVWCGGMI 293 (368)
T ss_dssp CTTTTTSHHHHHHHHHHHHHTTCCEEECCCC
T ss_pred cccccCCHHHHHHHHHHHHHcCCcEEeCCcc
Confidence 6654432 268899999999996555444
No 64
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=87.39 E-value=11 Score=32.91 Aligned_cols=151 Identities=13% Similarity=0.104 Sum_probs=90.9
Q ss_pred CChhHHHHHHHHHHHcCCceeeCCCC----CCC-----------hHHH---HH---HHHHHHhCCCCCCCCcEEEEeccC
Q 025159 37 SGSETTKLAILEAMKLGYRHFDTATL----YQT-----------EQPL---GD---AIAEALSTGIIKSRDELFIASKLW 95 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~Gi~~~DtA~~----Yg~-----------e~~l---g~---~l~~~~~~~~~~~R~~l~i~tK~~ 95 (257)
.+.++..+....+.+.|++.|..-.. +|. +..+ -+ ++++.+ + +++-|.....
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~g~~~~~~~~~~~e~v~avr~av--G-----~d~~l~vDan 217 (403)
T 2ox4_A 145 GRKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGVFLEGPLPSETIKIGVERVEAIRNAV--G-----PDVDIIVENH 217 (403)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTCCCSSSCCHHHHHHHHHHHHHHHHHH--C-----TTSEEEEECT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccccCCccccccCcccCCCchHHHHHHHHHHHHHHHHh--C-----CCCeEEEECC
Confidence 36788888888899999998875421 221 1111 12 233321 2 4566666653
Q ss_pred CCCCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEE-ecCC
Q 025159 96 CSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIG-VSNF 174 (257)
Q Consensus 96 ~~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iG-vs~~ 174 (257)
..++++...+-++. |+.+ ++.++..|... +-|+.+.++++.-.|--++ =+-+
T Consensus 218 -~~~~~~~ai~~~~~-l~~~-----~i~~iE~P~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~ 270 (403)
T 2ox4_A 218 -GHTDLVSAIQFAKA-IEEF-----NIFFYEEINTP--------------------LNPRLLKEAKKKIDIPLASGERIY 270 (403)
T ss_dssp -TCSCHHHHHHHHHH-HGGG-----CEEEEECCSCT--------------------TSTHHHHHHHHTCCSCEEECTTCC
T ss_pred -CCCCHHHHHHHHHH-HHhh-----CCCEEeCCCCh--------------------hhHHHHHHHHHhCCCCEEecCCcC
Confidence 33455554444443 5554 45566766321 2256677777766664444 3445
Q ss_pred CHHHHHHHHHhCCCCCceeccccCCCC---CcHHHHHHHHHCCceEEEecCC
Q 025159 175 SCKKLGDILATAKIPPAANQVEMNPLW---QQNKLREFCKAKDIQLAAYAPL 223 (257)
Q Consensus 175 ~~~~l~~~~~~~~~~p~~~q~~~~~~~---~~~~~~~~~~~~gi~v~~~~pl 223 (257)
+++.++++++....+ ++|+..+-+. .-..+.+.|+++|+.++.++..
T Consensus 271 ~~~~~~~~i~~~~~d--~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~~~ 320 (403)
T 2ox4_A 271 SRWGFLPFLEDRSID--VIQPDLGTCGGFTEFKKIADMAHIFEVTVQAHVAG 320 (403)
T ss_dssp HHHHHHHHHHTTCCS--EECCCHHHHTHHHHHHHHHHHHHHTTCEECCCCCS
T ss_pred CHHHHHHHHHcCCCC--EEecCccccCCHHHHHHHHHHHHHcCCEEeecCCC
Confidence 788899998876555 6666554322 2267899999999999987664
No 65
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=87.31 E-value=15 Score=32.33 Aligned_cols=150 Identities=17% Similarity=0.146 Sum_probs=92.6
Q ss_pred CChhHHHHHHHHHHHcCCceeeCCCCCC-----ChH------HHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHH
Q 025159 37 SGSETTKLAILEAMKLGYRHFDTATLYQ-----TEQ------PLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVV 105 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg-----~e~------~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~ 105 (257)
.+.++..+.++.+++.|++.|-.-...+ ... ..=+++|+. --+++-|..... ..++.+...
T Consensus 124 ~~~e~~~~~a~~~~~~G~~~iKl~G~~~~~~~~~~~~~~~d~e~v~avR~a-------vG~d~~L~vDaN-~~~~~~~A~ 195 (405)
T 3rr1_A 124 DRPADVIAGMKALQAGGFDHFKLNGCEEMGIIDTSRAVDAAVARVAEIRSA-------FGNTVEFGLDFH-GRVSAPMAK 195 (405)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEESCCSSSCBCSHHHHHHHHHHHHHHHHT-------TGGGSEEEEECC-SCBCHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCcccccccchhHHHHHHHHHHHHHH-------hCCCceEEEECC-CCCCHHHHH
Confidence 4778888899999999999987611100 111 122334433 124556666643 234444333
Q ss_pred HHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCee-EEEecCCCHHHHHHHHH
Q 025159 106 PALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTK-AIGVSNFSCKKLGDILA 184 (257)
Q Consensus 106 ~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~ 184 (257)
+ +-+.|+.+++++ ++.|... +-++.+.++++.-.|- ..|=+-+++..+.++++
T Consensus 196 ~-~~~~L~~~~i~~-----iEeP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~i~~~~~~~~~l~ 249 (405)
T 3rr1_A 196 V-LIKELEPYRPLF-----IEEPVLA--------------------EQAETYARLAAHTHLPIAAGERMFSRFDFKRVLE 249 (405)
T ss_dssp H-HHHHHGGGCCSC-----EECSSCC--------------------SSTHHHHHHHTTCSSCEEECTTCCSHHHHHHHHH
T ss_pred H-HHHHHHhcCCCE-----EECCCCc--------------------ccHHHHHHHHhcCCCCEEecCCcCCHHHHHHHHH
Confidence 2 334566666544 4566321 1246677787766653 34556788999999998
Q ss_pred hCCCCCceeccccCCCCC---cHHHHHHHHHCCceEEEecC
Q 025159 185 TAKIPPAANQVEMNPLWQ---QNKLREFCKAKDIQLAAYAP 222 (257)
Q Consensus 185 ~~~~~p~~~q~~~~~~~~---~~~~~~~~~~~gi~v~~~~p 222 (257)
...++ ++|....-+.- -..+.+.|+++|+.++.++.
T Consensus 250 ~~a~d--~v~~d~~~~GGitea~kia~lA~~~gi~v~~h~~ 288 (405)
T 3rr1_A 250 AGGVS--ILQPDLSHAGGITECVKIAAMAEAYDVALAPHCP 288 (405)
T ss_dssp HCCCS--EECCBTTTTTHHHHHHHHHHHHHTTTCEECCBCC
T ss_pred HhCCC--eEEEChhhcCCHHHHHHHHHHHHHcCCEEEeCCC
Confidence 77665 77777655432 36789999999999988764
No 66
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=87.27 E-value=14 Score=32.15 Aligned_cols=149 Identities=9% Similarity=0.048 Sum_probs=92.8
Q ss_pred CChhHHHHHHHHHHHcCCceeeCCCCCC--ChHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHh
Q 025159 37 SGSETTKLAILEAMKLGYRHFDTATLYQ--TEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLEN 114 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg--~e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~ 114 (257)
.+.++..+.++.+.+.|++.|..--... .....=+++|+.+ + +++-|..+... .++.+...+ +-+.|+.
T Consensus 150 ~~~e~~~~~a~~~~~~G~~~iKiKvG~~~~~d~~~v~avR~a~--g-----~d~~l~vDan~-~~~~~~A~~-~~~~l~~ 220 (389)
T 3ozy_A 150 LTPDQAADELAGWVEQGFTAAKLKVGRAPRKDAANLRAMRQRV--G-----ADVEILVDANQ-SLGRHDALA-MLRILDE 220 (389)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHH--C-----TTSEEEEECTT-CCCHHHHHH-HHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEeeccCCCHHHHHHHHHHHHHHc--C-----CCceEEEECCC-CcCHHHHHH-HHHHHHh
Confidence 4778888889999999999997543221 1122233455442 2 45556666533 344444333 3345676
Q ss_pred hCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHH-HcCCee-EEEecCCCHHHHHHHHHhCCCCCce
Q 025159 115 LQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQ-NLGYTK-AIGVSNFSCKKLGDILATAKIPPAA 192 (257)
Q Consensus 115 Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~G~ir-~iGvs~~~~~~l~~~~~~~~~~p~~ 192 (257)
+++++ +..|... +-++.+.+++ +.-.|- ..|=+-++++.+.++++...++ +
T Consensus 221 ~~i~~-----iEqP~~~--------------------~d~~~~~~l~~~~~~iPIa~dE~i~~~~~~~~~i~~~~~d--~ 273 (389)
T 3ozy_A 221 AGCYW-----FEEPLSI--------------------DDIEGHRILRAQGTPVRIATGENLYTRNAFNDYIRNDAID--V 273 (389)
T ss_dssp TTCSE-----EESCSCT--------------------TCHHHHHHHHTTCCSSEEEECTTCCHHHHHHHHHHTTCCS--E
T ss_pred cCCCE-----EECCCCc--------------------ccHHHHHHHHhcCCCCCEEeCCCCCCHHHHHHHHHcCCCC--E
Confidence 66554 4555321 1256677887 655553 3344567788899998876655 7
Q ss_pred eccccCCCCC---cHHHHHHHHHCCceEEEec
Q 025159 193 NQVEMNPLWQ---QNKLREFCKAKDIQLAAYA 221 (257)
Q Consensus 193 ~q~~~~~~~~---~~~~~~~~~~~gi~v~~~~ 221 (257)
+|+...-+.- -..+.+.|+++|+.++.++
T Consensus 274 v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h~ 305 (389)
T 3ozy_A 274 LQADASRAGGITEALAISASAASAHLAWNPHT 305 (389)
T ss_dssp ECCCTTTSSCHHHHHHHHHHHHHTTCEECCCC
T ss_pred EEeCccccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 7777665432 2678999999999998774
No 67
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=86.81 E-value=12 Score=32.73 Aligned_cols=150 Identities=13% Similarity=0.156 Sum_probs=89.9
Q ss_pred ChhHHHHHHHHHHHcCCceeeCCC--CCCC-----------h---HHH---HHHHHHHHhCCCCCCCCcEEEEeccCCCC
Q 025159 38 GSETTKLAILEAMKLGYRHFDTAT--LYQT-----------E---QPL---GDAIAEALSTGIIKSRDELFIASKLWCSD 98 (257)
Q Consensus 38 ~~~~~~~~l~~Al~~Gi~~~DtA~--~Yg~-----------e---~~l---g~~l~~~~~~~~~~~R~~l~i~tK~~~~~ 98 (257)
+.++..+....+.+.|++.|-.-. .||. + +.. =+++|+.+ + +++-|..... ..
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~~~~G~~~~~~~~~~~~e~v~avRea~--G-----~d~~l~vDan-~~ 220 (410)
T 2qq6_A 149 SNEEYIAVAREAVERGFDAIKLDVDDITGPLHRDFWNGAISPREHEAMVARVAAVREAV--G-----PEVEVAIDMH-GR 220 (410)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSSTTCSCSSSCCCCHHHHHHHHHHHHHHHHHH--C-----SSSEEEEECT-TC
T ss_pred CHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCcCccccchhhHHHHHHHHHHHHHhc--C-----CCCEEEEECC-CC
Confidence 567777788888899999876432 2331 1 111 12333331 2 4555666653 33
Q ss_pred CChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEE-EecCCCHH
Q 025159 99 AHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAI-GVSNFSCK 177 (257)
Q Consensus 99 ~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~i-Gvs~~~~~ 177 (257)
++++...+-++. |+.++++ ++..|... +-|+.+.++++.-.|--. |=+-++++
T Consensus 221 ~~~~~a~~~~~~-l~~~~i~-----~iEeP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~ 274 (410)
T 2qq6_A 221 FDIPSSIRFARA-MEPFGLL-----WLEEPTPP--------------------ENLDALAEVRRSTSTPICAGENVYTRF 274 (410)
T ss_dssp CCHHHHHHHHHH-HGGGCCS-----EEECCSCT--------------------TCHHHHHHHHTTCSSCEEECTTCCSHH
T ss_pred CCHHHHHHHHHH-HhhcCCC-----eEECCCCh--------------------hhHHHHHHHHhhCCCCEEeCCCcCCHH
Confidence 455555544433 6666654 45666321 226677777776555433 44556889
Q ss_pred HHHHHHHhCCCCCceeccccCCCC---CcHHHHHHHHHCCceEEEecCC
Q 025159 178 KLGDILATAKIPPAANQVEMNPLW---QQNKLREFCKAKDIQLAAYAPL 223 (257)
Q Consensus 178 ~l~~~~~~~~~~p~~~q~~~~~~~---~~~~~~~~~~~~gi~v~~~~pl 223 (257)
.++++++...++ ++|+..+-+. .-..+.+.|+++|+.++.++..
T Consensus 275 ~~~~~i~~~~~d--~v~ik~~~~GGite~~~ia~~A~~~g~~~~~h~~~ 321 (410)
T 2qq6_A 275 DFRELFAKRAVD--YVMPDVAKCGGLAEAKRIANLAELDYIPFAPHNVS 321 (410)
T ss_dssp HHHHHHHTTCCS--EECCBHHHHTHHHHHHHHHHHHHTTTCCBCCBCCS
T ss_pred HHHHHHHcCCCC--EEecCccccCCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 999999876655 6666554322 1257899999999999887653
No 68
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=86.66 E-value=15 Score=31.77 Aligned_cols=149 Identities=13% Similarity=0.098 Sum_probs=91.7
Q ss_pred ChhHHHHHHHHHHHcCCceeeCCCCCCChHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHhhCC
Q 025159 38 GSETTKLAILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLENLQL 117 (257)
Q Consensus 38 ~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~Lg~ 117 (257)
+.++..+..+.+.+.|++.|..--.. +.+..-+.++...+. --+++-|..+.. ..++.+...+-+ +.|+.+
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~iKik~g~-~~~~~~e~v~avr~a----~g~d~~l~vDan-~~~~~~~a~~~~-~~l~~~-- 215 (379)
T 2rdx_A 145 SEAETRAELARHRAAGYRQFQIKVGA-DWQSDIDRIRACLPL----LEPGEKAMADAN-QGWRVDNAIRLA-RATRDL-- 215 (379)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEECCS-CHHHHHHHHHHHGGG----SCTTCEEEEECT-TCSCHHHHHHHH-HHTTTS--
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccC-CHHHHHHHHHHHHHh----cCCCCEEEEECC-CCCCHHHHHHHH-HHHHhC--
Confidence 56778888888999999998753221 323333444433111 124666776754 234444433322 224433
Q ss_pred CcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEE-ecCCCHHHHHHHHHhCCCCCceeccc
Q 025159 118 EYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIG-VSNFSCKKLGDILATAKIPPAANQVE 196 (257)
Q Consensus 118 d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iG-vs~~~~~~l~~~~~~~~~~p~~~q~~ 196 (257)
++ ++..|. . -|+.+.++++.-.|--++ =+-++++.++++++....+ ++|+.
T Consensus 216 ---~i-~iE~P~-------------------~---~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d--~v~ik 267 (379)
T 2rdx_A 216 ---DY-ILEQPC-------------------R---SYEECQQVRRVADQPMKLDECVTGLHMAQRIVADRGAE--ICCLK 267 (379)
T ss_dssp ---CC-EEECCS-------------------S---SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCS--EEEEE
T ss_pred ---Ce-EEeCCc-------------------C---CHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCC--EEEEe
Confidence 44 555551 1 367777888765554443 3456889999999877666 77776
Q ss_pred cCCCCC---cHHHHHHHHHCCceEEEecCC
Q 025159 197 MNPLWQ---QNKLREFCKAKDIQLAAYAPL 223 (257)
Q Consensus 197 ~~~~~~---~~~~~~~~~~~gi~v~~~~pl 223 (257)
.+-+.- -..+.+.|+++|+.++..+-+
T Consensus 268 ~~~~GGit~~~~i~~~A~~~g~~~~~~~~~ 297 (379)
T 2rdx_A 268 ISNLGGLSKARRTRDFLIDNRMPVVAEDSW 297 (379)
T ss_dssp TTTTTSHHHHHHHHHHHHHTTCCEEEECSB
T ss_pred ccccCCHHHHHHHHHHHHHcCCeEEEeecc
Confidence 665432 267899999999999988544
No 69
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=86.03 E-value=17 Score=31.67 Aligned_cols=149 Identities=11% Similarity=0.007 Sum_probs=88.8
Q ss_pred ChhHHHHHHHHHHHcCCceeeCCCCCCChH---HHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHh
Q 025159 38 GSETTKLAILEAMKLGYRHFDTATLYQTEQ---PLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLEN 114 (257)
Q Consensus 38 ~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~---~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~ 114 (257)
+.++..+..+.+.+.|++.|..--..++-+ ..=+++++.+ + +++.|..... ..++.+...+-++. |+.
T Consensus 165 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~--g-----~~~~l~vDan-~~~~~~~a~~~~~~-l~~ 235 (392)
T 1tzz_A 165 GLSMLRGEMRGYLDRGYNVVKMKIGGAPIEEDRMRIEAVLEEI--G-----KDAQLAVDAN-GRFNLETGIAYAKM-LRD 235 (392)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECSSSCHHHHHHHHHHHHHHH--T-----TTCEEEEECT-TCCCHHHHHHHHHH-HTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhc--C-----CCCeEEEECC-CCCCHHHHHHHHHH-HHH
Confidence 667778888888999999887433222211 1222344431 2 3455555553 23455554444433 555
Q ss_pred hCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEE-EecCCCHHHHHHHHHhCCC--CCc
Q 025159 115 LQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAI-GVSNFSCKKLGDILATAKI--PPA 191 (257)
Q Consensus 115 Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~--~p~ 191 (257)
++++ ++..|.. .+-|+.+.++++.-.|--. |=+-++++.++++++.... ...
T Consensus 236 ~~i~-----~iEqP~~--------------------~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~~~~~d 290 (392)
T 1tzz_A 236 YPLF-----WYEEVGD--------------------PLDYALQAALAEFYPGPMATGENLFSHQDARNLLRYGGMRPDRD 290 (392)
T ss_dssp SCCS-----EEECCSC--------------------TTCHHHHHHHTTTCCSCEEECTTCCSHHHHHHHHHHSCCCTTTC
T ss_pred cCCC-----eecCCCC--------------------hhhHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCccCCc
Confidence 5544 4566632 1236777788876555433 3455689999999987721 223
Q ss_pred eeccccCCCCC---cHHHHHHHHHCCce---EEEe
Q 025159 192 ANQVEMNPLWQ---QNKLREFCKAKDIQ---LAAY 220 (257)
Q Consensus 192 ~~q~~~~~~~~---~~~~~~~~~~~gi~---v~~~ 220 (257)
++|+..+-+.- -..+.+.|+++|+. ++.+
T Consensus 291 ~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~~ 325 (392)
T 1tzz_A 291 WLQFDCALSYGLCEYQRTLEVLKTHGWSPSRCIPH 325 (392)
T ss_dssp EECCCTTTTTCHHHHHHHHHHHHHTTCCGGGBCCS
T ss_pred EEEECccccCCHHHHHHHHHHHHHCCCCCceEeec
Confidence 67666554322 26789999999999 8776
No 70
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=86.02 E-value=17 Score=31.72 Aligned_cols=149 Identities=15% Similarity=0.070 Sum_probs=92.0
Q ss_pred ChhHHHHHHHHHHHcCCceeeCCCCCCChHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHhhCC
Q 025159 38 GSETTKLAILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLENLQL 117 (257)
Q Consensus 38 ~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~Lg~ 117 (257)
+.++..+.++.+++.|++.|=.--..+.+...=+++|+. - .++-|..-... .++++...+ + +.|+.
T Consensus 149 ~~e~~~~~~~~~~~~G~~~~K~Kv~~~~d~~~v~avR~~-------~-~~~~l~vDaN~-~~~~~~A~~-~-~~l~~--- 214 (388)
T 3qld_A 149 SLDVLIQSVDAAVEQGFRRVKLKIAPGRDRAAIKAVRLR-------Y-PDLAIAADANG-SYRPEDAPV-L-RQLDA--- 214 (388)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECBTTBSHHHHHHHHHH-------C-TTSEEEEECTT-CCCGGGHHH-H-HHGGG---
T ss_pred CHHHHHHHHHHHHHhCCCeEEEEeCcHHHHHHHHHHHHH-------C-CCCeEEEECCC-CCChHHHHH-H-HHHhh---
Confidence 478888889999999999763322122223333456665 2 33444444322 334454432 3 23333
Q ss_pred CcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe-eEEEecCCCHHHHHHHHHhCCCCCceeccc
Q 025159 118 EYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT-KAIGVSNFSCKKLGDILATAKIPPAANQVE 196 (257)
Q Consensus 118 d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~p~~~q~~ 196 (257)
.++.++..|... +-++.+.++.+.-.| -+.|=|-++...+.++++...++ ++|..
T Consensus 215 --~~i~~iEeP~~~--------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d--~v~~k 270 (388)
T 3qld_A 215 --YDLQFIEQPLPE--------------------DDWFDLAKLQASLRTPVCLDESVRSVRELKLTARLGAAR--VLNVK 270 (388)
T ss_dssp --GCCSCEECCSCT--------------------TCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCS--EEEEC
T ss_pred --CCCcEEECCCCc--------------------ccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCC--EEEEC
Confidence 466778887432 114566667665444 45677888999999998876655 77766
Q ss_pred cCCCC---CcHHHHHHHHHCCceEEEecCCC
Q 025159 197 MNPLW---QQNKLREFCKAKDIQLAAYAPLG 224 (257)
Q Consensus 197 ~~~~~---~~~~~~~~~~~~gi~v~~~~pl~ 224 (257)
.+-+. .-..+.+.|+++|+.++..+.+.
T Consensus 271 ~~~~GGit~~~~ia~~A~~~gi~~~~~~~~e 301 (388)
T 3qld_A 271 PGRLGGFGATLRALDVAGEAGMAAWVGGMYE 301 (388)
T ss_dssp HHHHTSHHHHHHHHHHHHHTTCEEEECCCCC
T ss_pred chhhCCHHHHHHHHHHHHHCCCeEEecCccc
Confidence 54432 23679999999999998776553
No 71
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=85.92 E-value=16 Score=31.37 Aligned_cols=153 Identities=12% Similarity=0.124 Sum_probs=93.0
Q ss_pred ChhHHHHHHHHHHHcCCceeeCCCCCCChH---HHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHh
Q 025159 38 GSETTKLAILEAMKLGYRHFDTATLYQTEQ---PLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLEN 114 (257)
Q Consensus 38 ~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~---~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~ 114 (257)
+.++..+....+.+.|++.|..--..++-+ ..=+++++.+ + +++-|..+.. ..++.+...+-++. |+.
T Consensus 140 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~d~~~v~avr~a~--g-----~~~~l~vDan-~~~~~~~a~~~~~~-l~~ 210 (366)
T 1tkk_A 140 SPEEMAADAENYLKQGFQTLKIKVGKDDIATDIARIQEIRKRV--G-----SAVKLRLDAN-QGWRPKEAVTAIRK-MED 210 (366)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHHH--C-----SSSEEEEECT-TCSCHHHHHHHHHH-HHH
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEeCCCCHHHHHHHHHHHHHHh--C-----CCCeEEEECC-CCCCHHHHHHHHHH-Hhh
Confidence 567777888888899999987533222221 1222344431 2 3555666653 33455555444443 665
Q ss_pred hCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCee-EEEecCCCHHHHHHHHHhCCCCCcee
Q 025159 115 LQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTK-AIGVSNFSCKKLGDILATAKIPPAAN 193 (257)
Q Consensus 115 Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~p~~~ 193 (257)
.+ .++.++..|... +-|+.+.++++.-.|- ..|=+-++++.+.++++....+ ++
T Consensus 211 ~~---~~i~~iEqP~~~--------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d--~v 265 (366)
T 1tkk_A 211 AG---LGIELVEQPVHK--------------------DDLAGLKKVTDATDTPIMADESVFTPRQAFEVLQTRSAD--LI 265 (366)
T ss_dssp TT---CCEEEEECCSCT--------------------TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCCS--EE
T ss_pred cC---CCceEEECCCCc--------------------ccHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHHhCCCC--EE
Confidence 21 245566776321 2256667777655553 3345667899999998876655 66
Q ss_pred ccccCCCCC---cHHHHHHHHHCCceEEEecCCC
Q 025159 194 QVEMNPLWQ---QNKLREFCKAKDIQLAAYAPLG 224 (257)
Q Consensus 194 q~~~~~~~~---~~~~~~~~~~~gi~v~~~~pl~ 224 (257)
|+..+-+.- -..+.+.|+++|+.++..+.+.
T Consensus 266 ~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~e 299 (366)
T 1tkk_A 266 NIKLMKAGGISGAEKINAMAEACGVECMVGSMIE 299 (366)
T ss_dssp EECHHHHTSHHHHHHHHHHHHHHTCCEEECCSSC
T ss_pred EeehhhhcCHHHHHHHHHHHHHcCCcEEecCccc
Confidence 665543322 2678999999999999887653
No 72
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=85.68 E-value=11 Score=32.98 Aligned_cols=149 Identities=11% Similarity=0.127 Sum_probs=91.3
Q ss_pred ChhHHHHHHHHHHHcCCceeeCCCCCCC----hHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHH
Q 025159 38 GSETTKLAILEAMKLGYRHFDTATLYQT----EQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLE 113 (257)
Q Consensus 38 ~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~----e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~ 113 (257)
+.++..+....+.+.|++.|..-.. ++ .+.+ +++++.+ + +++-|..... ..++.+...+-++ .|+
T Consensus 145 ~~e~~~~~a~~~~~~Gf~~vKik~g-~~~~~~~e~v-~avR~a~--g-----~d~~l~vDan-~~~~~~~a~~~~~-~l~ 213 (397)
T 2qde_A 145 EPEAVAEEALAVLREGFHFVKLKAG-GPLKADIAMV-AEVRRAV--G-----DDVDLFIDIN-GAWTYDQALTTIR-ALE 213 (397)
T ss_dssp CHHHHHHHHHHHHHHTCSCEEEECC-SCHHHHHHHH-HHHHHHH--C-----TTSCEEEECT-TCCCHHHHHHHHH-HHG
T ss_pred CHHHHHHHHHHHHHhhhhheeeccc-CCHHHHHHHH-HHHHHhh--C-----CCCEEEEECC-CCCCHHHHHHHHH-HHH
Confidence 5677778888888999998864322 12 2222 3444442 2 3444455543 3345555544443 577
Q ss_pred hhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeE-EEecCCCHHHHHHHHHhCCCCCce
Q 025159 114 NLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKA-IGVSNFSCKKLGDILATAKIPPAA 192 (257)
Q Consensus 114 ~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~-iGvs~~~~~~l~~~~~~~~~~p~~ 192 (257)
.+++++ +..|... +-++.+.++++.-.|-- .|=+-++++.++++++....+ +
T Consensus 214 ~~~i~~-----iEqP~~~--------------------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d--~ 266 (397)
T 2qde_A 214 KYNLSK-----IEQPLPA--------------------WDLDGMARLRGKVATPIYADESAQELHDLLAIINKGAAD--G 266 (397)
T ss_dssp GGCCSC-----EECCSCT--------------------TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCS--E
T ss_pred hCCCCE-----EECCCCh--------------------hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCC--E
Confidence 777654 4555321 23677777777655533 344556889999999876655 6
Q ss_pred eccccCCCCC---cHHHHHHHHHCCceEEEecCCC
Q 025159 193 NQVEMNPLWQ---QNKLREFCKAKDIQLAAYAPLG 224 (257)
Q Consensus 193 ~q~~~~~~~~---~~~~~~~~~~~gi~v~~~~pl~ 224 (257)
+|+..+-+.- -..+.+.|+++|+.++..+-+.
T Consensus 267 v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~e 301 (397)
T 2qde_A 267 LMIKTQKAGGLLKAQRWLTLARLANLPVICGCMVG 301 (397)
T ss_dssp EEECHHHHTSHHHHHHHHHHHHHHTCCEEECCCSC
T ss_pred EEEeccccCCHHHHHHHHHHHHHcCCeEEEecCcc
Confidence 6665543322 2678999999999999886543
No 73
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=84.83 E-value=9.3 Score=33.21 Aligned_cols=152 Identities=11% Similarity=0.118 Sum_probs=92.5
Q ss_pred CChhHHHHHHHHHHHcCCceeeCCCCCCChHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHhhC
Q 025159 37 SGSETTKLAILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLENLQ 116 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~Lg 116 (257)
.++++..+.++.+.+.|++.|..--....+.. -+.++... +. --+++-|..+... .++++...+ +-+.|+.+
T Consensus 144 ~~~e~~~~~a~~~~~~G~~~iKiK~G~~~~~d-~~~v~avR-~a---~g~~~~l~vDan~-~~~~~~a~~-~~~~l~~~- 215 (378)
T 3eez_A 144 KSVEETRAVIDRYRQRGYVAHSVKIGGDVERD-IARIRDVE-DI---REPGEIVLYDVNR-GWTRQQALR-VMRATEDL- 215 (378)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCSCHHHH-HHHHHHHT-TS---CCTTCEEEEECTT-CCCHHHHHH-HHHHTGGG-
T ss_pred CCHHHHHHHHHHHHhCCCCEEEeccCCCHHHH-HHHHHHHH-HH---cCCCceEEEECCC-CCCHHHHHH-HHHHhccC-
Confidence 47788888888999999999985433211111 22233321 11 1246677777543 334443222 22233433
Q ss_pred CCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCee-EEEecCCCHHHHHHHHHhCCCCCceecc
Q 025159 117 LEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTK-AIGVSNFSCKKLGDILATAKIPPAANQV 195 (257)
Q Consensus 117 ~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~p~~~q~ 195 (257)
++ ++..|.. .|+.+.++++.-.|- ..|=+-++++.+.++++...++ ++|.
T Consensus 216 ----~i-~iEqP~~----------------------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d--~v~i 266 (378)
T 3eez_A 216 ----HV-MFEQPGE----------------------TLDDIAAIRPLHSAPVSVDECLVTLQDAARVARDGLAE--VFGI 266 (378)
T ss_dssp ----TC-CEECCSS----------------------SHHHHHHTGGGCCCCEEECTTCCSHHHHHHHHHTTCCS--EEEE
T ss_pred ----Ce-EEecCCC----------------------CHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCC--EEEe
Confidence 45 5566521 256777888776653 3455678899999999876655 7776
Q ss_pred ccCCCC---CcHHHHHHHHHCCceEEEecCCCC
Q 025159 196 EMNPLW---QQNKLREFCKAKDIQLAAYAPLGA 225 (257)
Q Consensus 196 ~~~~~~---~~~~~~~~~~~~gi~v~~~~pl~~ 225 (257)
...-+. .-..+.+.|+++|+.++..+.+.+
T Consensus 267 k~~~~GGit~~~~ia~~A~~~g~~~~~~~~~es 299 (378)
T 3eez_A 267 KLNRVGGLTRAARMRDIALTHGIDMFVMATGGS 299 (378)
T ss_dssp EHHHHTSHHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred CchhcCCHHHHHHHHHHHHHcCCEEEcCCCCCC
Confidence 654332 236789999999999998776643
No 74
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=84.51 E-value=16 Score=31.76 Aligned_cols=147 Identities=18% Similarity=0.133 Sum_probs=89.3
Q ss_pred ChhHHHHHHHHHHHcCCceeeC--CCCCCChHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHhh
Q 025159 38 GSETTKLAILEAMKLGYRHFDT--ATLYQTEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLENL 115 (257)
Q Consensus 38 ~~~~~~~~l~~Al~~Gi~~~Dt--A~~Yg~e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~L 115 (257)
+.++..+.+..+.+.|++.|-. .+.. ..+.+ +++++. - .++-|..-.. ..++++.. + .+++|
T Consensus 161 ~~e~~~~~a~~~~~~G~~~~KiKvg~~~-d~~~v-~avr~a-------~-~~~~l~vDaN-~~~~~~~a-~----~~~~l 224 (393)
T 1wuf_A 161 NVETLLQLVNQYVDQGYERVKLKIAPNK-DIQFV-EAVRKS-------F-PKLSLMADAN-SAYNREDF-L----LLKEL 224 (393)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECBTTB-SHHHH-HHHHTT-------C-TTSEEEEECT-TCCCGGGH-H----HHHTT
T ss_pred CHHHHHHHHHHHHHHhhHhheeccChHH-HHHHH-HHHHHH-------c-CCCEEEEECC-CCCCHHHH-H----HHHHH
Confidence 4677777888888999998642 2111 22222 444543 1 3444554443 23445544 3 23333
Q ss_pred CCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe-eEEEecCCCHHHHHHHHHhCCCCCceec
Q 025159 116 QLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT-KAIGVSNFSCKKLGDILATAKIPPAANQ 194 (257)
Q Consensus 116 g~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~p~~~q 194 (257)
. ..++.++..|... +-++.+.++.+.-.| -..|=|-++...+.++++...++ ++|
T Consensus 225 ~--~~~i~~iEqP~~~--------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d--~v~ 280 (393)
T 1wuf_A 225 D--QYDLEMIEQPFGT--------------------KDFVDHAWLQKQLKTRICLDENIRSVKDVEQAHSIGSCR--AIN 280 (393)
T ss_dssp G--GGTCSEEECCSCS--------------------SCSHHHHHHHTTCSSEEEECTTCCSHHHHHHHHHHTCCS--EEE
T ss_pred H--hCCCeEEECCCCC--------------------cCHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCC--EEE
Confidence 2 2467788888432 114566677765444 34566678899999998876655 777
Q ss_pred cccCCCCC---cHHHHHHHHHCCceEEEecCCC
Q 025159 195 VEMNPLWQ---QNKLREFCKAKDIQLAAYAPLG 224 (257)
Q Consensus 195 ~~~~~~~~---~~~~~~~~~~~gi~v~~~~pl~ 224 (257)
+..+-+.- -..+.+.|+++|+.++..+.+.
T Consensus 281 ik~~~~GGit~~~~ia~~A~~~gi~~~~~~~~e 313 (393)
T 1wuf_A 281 LKLARVGGMSSALKIAEYCALNEILVWCGGMLE 313 (393)
T ss_dssp ECTGGGTSHHHHHHHHHHHHHTTCEEEECCCCC
T ss_pred eChhhhCCHHHHHHHHHHHHHcCCeEEecCCcc
Confidence 76654322 2678999999999998776654
No 75
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=84.37 E-value=12 Score=33.04 Aligned_cols=149 Identities=16% Similarity=0.179 Sum_probs=92.5
Q ss_pred CChhHHHHHHHHHHHcCCceeeCCCCCCC-------hH--HHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHH
Q 025159 37 SGSETTKLAILEAMKLGYRHFDTATLYQT-------EQ--PLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPA 107 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~-------e~--~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~ 107 (257)
.+.++..+..+.+.+.|++.|..--..+. +. ..=+++|+.+ -+++-|...... .++.+...+
T Consensus 178 ~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg~~~~~~die~v~avReav-------G~d~~L~vDaN~-~~~~~~Ai~- 248 (412)
T 3stp_A 178 GSIEAMQKEAEEAMKGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREVI-------GYDNDLMLECYM-GWNLDYAKR- 248 (412)
T ss_dssp CCHHHHHHHHHHHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHHH-------CSSSEEEEECTT-CSCHHHHHH-
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCcccccchHHHHHHHHHHHHHHc-------CCCCeEEEECCC-CCCHHHHHH-
Confidence 36788888889999999999876544331 11 1223344442 245556666543 334444333
Q ss_pred HHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCee-EEEecCCCHHHHHHHHHhC
Q 025159 108 LQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTK-AIGVSNFSCKKLGDILATA 186 (257)
Q Consensus 108 l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~ 186 (257)
+-+.|+.++++ ++..|... +-++.+.++++.-.|- ..|=+-+++..+.++++..
T Consensus 249 ~~~~Le~~~i~-----~iEeP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~li~~~ 303 (412)
T 3stp_A 249 MLPKLAPYEPR-----WLEEPVIA--------------------DDVAGYAELNAMNIVPISGGEHEFSVIGCAELINRK 303 (412)
T ss_dssp HHHHHGGGCCS-----EEECCSCT--------------------TCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTT
T ss_pred HHHHHHhcCCC-----EEECCCCc--------------------ccHHHHHHHHhCCCCCEEeCCCCCCHHHHHHHHHcC
Confidence 23455666544 45666321 1256777888875553 4455678899999999876
Q ss_pred CCCCceeccccCCCC---CcHHHHHHHHHCCceEEEec
Q 025159 187 KIPPAANQVEMNPLW---QQNKLREFCKAKDIQLAAYA 221 (257)
Q Consensus 187 ~~~p~~~q~~~~~~~---~~~~~~~~~~~~gi~v~~~~ 221 (257)
.++ ++|....-+. .-..+.+.|+++|+.++.++
T Consensus 304 a~D--~v~ik~~~~GGit~a~kia~~A~a~gi~v~~h~ 339 (412)
T 3stp_A 304 AVS--VLQYDTNRVGGITAAQKINAIAEAAQIPVIPHA 339 (412)
T ss_dssp CCS--EECCCHHHHTHHHHHHHHHHHHHHHTCCBCCSS
T ss_pred CCC--EEecChhhcCCHHHHHHHHHHHHHcCCEEEecc
Confidence 655 7766654332 12578999999999998765
No 76
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=84.23 E-value=19 Score=30.83 Aligned_cols=151 Identities=13% Similarity=0.127 Sum_probs=94.1
Q ss_pred CChhHHHHHHHHHHHcCCceeeCCCCCC--ChHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHh
Q 025159 37 SGSETTKLAILEAMKLGYRHFDTATLYQ--TEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLEN 114 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg--~e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~ 114 (257)
.+.++..+..+.+++.|++.|-.--.-. .+...=+++|+.+ + +++-|...... .++++.. .+.+++
T Consensus 138 ~~~~~~~~~a~~~~~~G~~~~K~K~g~~~~~d~~~v~avR~a~--g-----~~~~l~vDan~-~~~~~~a----~~~~~~ 205 (354)
T 3jva_A 138 DEPNVMAQKAVEKVKLGFDTLKIKVGTGIEADIARVKAIREAV--G-----FDIKLRLDANQ-AWTPKDA----VKAIQA 205 (354)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHH--C-----TTSEEEEECTT-CSCHHHH----HHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHHHHHc--C-----CCCeEEEECCC-CCCHHHH----HHHHHH
Confidence 3677788888888999999887543221 1222234455542 2 45556666532 2343332 233444
Q ss_pred hCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe-eEEEecCCCHHHHHHHHHhCCCCCcee
Q 025159 115 LQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT-KAIGVSNFSCKKLGDILATAKIPPAAN 193 (257)
Q Consensus 115 Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~p~~~ 193 (257)
|. ..++.++..|... +-++.+.+++++-.| -..|=+-++++.+.++++....+ ++
T Consensus 206 L~--~~~i~~iEqP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d--~v 261 (354)
T 3jva_A 206 LA--DYQIELVEQPVKR--------------------RDLEGLKYVTSQVNTTIMADESCFDAQDALELVKKGTVD--VI 261 (354)
T ss_dssp TT--TSCEEEEECCSCT--------------------TCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHHTCCS--EE
T ss_pred HH--hcCCCEEECCCCh--------------------hhHHHHHHHHHhCCCCEEEcCCcCCHHHHHHHHHcCCCC--EE
Confidence 43 2567777877431 125667777776555 34455678899999998876655 66
Q ss_pred ccccCCCCC---cHHHHHHHHHCCceEEEecCC
Q 025159 194 QVEMNPLWQ---QNKLREFCKAKDIQLAAYAPL 223 (257)
Q Consensus 194 q~~~~~~~~---~~~~~~~~~~~gi~v~~~~pl 223 (257)
|+..+-+.- -..+.+.|+++|+.++..+.+
T Consensus 262 ~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~ 294 (354)
T 3jva_A 262 NIKLMKCGGIHEALKINQICETAGIECMIGCMA 294 (354)
T ss_dssp EECHHHHTSHHHHHHHHHHHHHTTCEEEECCCT
T ss_pred EECchhcCCHHHHHHHHHHHHHcCCeEEecCCC
Confidence 666543322 267899999999999988877
No 77
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=84.18 E-value=21 Score=31.20 Aligned_cols=149 Identities=12% Similarity=0.074 Sum_probs=90.8
Q ss_pred CChhHHHHHH-HHHHHcCCceeeCCCCC-------C--ChHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHH
Q 025159 37 SGSETTKLAI-LEAMKLGYRHFDTATLY-------Q--TEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVP 106 (257)
Q Consensus 37 ~~~~~~~~~l-~~Al~~Gi~~~DtA~~Y-------g--~e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~ 106 (257)
.+.++..+.+ +.+++.|++.|-.--.. . .....=+++|+.+ + +++-|...... .++.+...+
T Consensus 138 ~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~a~--g-----~~~~l~vDaN~-~~~~~~A~~ 209 (393)
T 4dwd_A 138 RSVDEVVREVARRVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVRELL--G-----PDAVIGFDANN-GYSVGGAIR 209 (393)
T ss_dssp SCHHHHHHHHHHHHHHHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHHHH--C-----TTCCEEEECTT-CCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEccCCCCcccccCHHHHHHHHHHHHHHh--C-----CCCeEEEECCC-CCCHHHHHH
Confidence 3567777777 88899999988643321 1 1222233455542 2 34445555432 334443332
Q ss_pred HHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCee-EEEecCCCHHHHHHHHHh
Q 025159 107 ALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTK-AIGVSNFSCKKLGDILAT 185 (257)
Q Consensus 107 ~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~ 185 (257)
+-+.|+.++++ ++..|... +-++.+.++++.-.|- ..|=+-++++.+.++++.
T Consensus 210 -~~~~L~~~~i~-----~iEqP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ 263 (393)
T 4dwd_A 210 -VGRALEDLGYS-----WFEEPVQH--------------------YHVGAMGEVAQRLDITVSAGEQTYTLQALKDLILS 263 (393)
T ss_dssp -HHHHHHHTTCS-----EEECCSCT--------------------TCHHHHHHHHHHCSSEEEBCTTCCSHHHHHHHHHH
T ss_pred -HHHHHHhhCCC-----EEECCCCc--------------------ccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHc
Confidence 33456666654 44555321 1246677777765553 345567789999999887
Q ss_pred CCCCCceeccccCCCCC---cHHHHHHHHHCCceEEEecC
Q 025159 186 AKIPPAANQVEMNPLWQ---QNKLREFCKAKDIQLAAYAP 222 (257)
Q Consensus 186 ~~~~p~~~q~~~~~~~~---~~~~~~~~~~~gi~v~~~~p 222 (257)
. ++ ++|+...-+.- -..+.+.|+++|+.++.++.
T Consensus 264 ~-~d--~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 300 (393)
T 4dwd_A 264 G-VR--MVQPDIVKMGGITGMMQCAALAHAHGVEFVPHQT 300 (393)
T ss_dssp T-CC--EECCCTTTTTHHHHHHHHHHHHHHHTCEECCCCC
T ss_pred C-CC--EEEeCccccCCHHHHHHHHHHHHHcCCEEeecCC
Confidence 6 55 88877665432 26789999999999998776
No 78
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=84.07 E-value=6.9 Score=33.23 Aligned_cols=122 Identities=10% Similarity=0.057 Sum_probs=80.2
Q ss_pred HHHHHHHHHHhhCCCcccEEEee-cCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHc-CCeeEEEe-cC----CCH
Q 025159 104 VVPALQKSLENLQLEYIDLYVIH-WPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNL-GYTKAIGV-SN----FSC 176 (257)
Q Consensus 104 i~~~l~~sL~~Lg~d~lDl~~lh-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-G~ir~iGv-s~----~~~ 176 (257)
+.+..++.. ..|.|.||+=.-- +|... ..+.++.++.++.+++. +.. |.| -+ +++
T Consensus 76 ~~~~A~~~v-~~GAdiIDIg~~StrP~~~---------------~vs~eee~~vV~~v~~~~~vp--lsI~DT~~~~~~~ 137 (310)
T 2h9a_B 76 PVAWAKKCV-EYGADIVALRLVSAHPDGQ---------------NRSGAELAEVCKAVADAIDVP--LMIIGCGVEEKDA 137 (310)
T ss_dssp HHHHHHHHH-HTTCSEEEEECGGGCTTTT---------------CCCHHHHHHHHHHHHHHCSSC--EEEECCSCHHHHH
T ss_pred HHHHHHHHH-HcCCcEEEEeCccCCCCCC---------------CCCHHHHHHHHHHHHHhCCce--EEEECCCCCCCCH
Confidence 333333444 7888888876632 22211 23467777788888775 433 666 66 889
Q ss_pred HHHHHHHHhCC-CCCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCCCCCCCCccChHHHHHHHHHhCCCcccc
Q 025159 177 KKLGDILATAK-IPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTIWGSNRVMECEVLKEIAEAKGKTVAQV 255 (257)
Q Consensus 177 ~~l~~~~~~~~-~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~l~~~~~~~~~~~~~~ia~~~~~s~~qv 255 (257)
+.+++.++.+. -++.+|-+.- . ...++.+.|.++|.+++.+++.. +..-..+.+.|.++|+++.++
T Consensus 138 ~V~eaal~aga~~k~iINdvs~--~-~~~~~~~~aa~~g~~vv~m~~~d----------v~~l~~~~~~a~~~Gi~~e~I 204 (310)
T 2h9a_B 138 EIFPVIGEALSGRNCLLSSATK--D-NYKPIVATCMVHGHSVVASAPLD----------INLSKQLNIMIMEMNLAPNRI 204 (310)
T ss_dssp HHHHHHHHHTTTSCCEEEEECT--T-THHHHHHHHHHHTCEEEEECSSC----------HHHHHHHHHHHHTTTCCGGGE
T ss_pred HHHHHHHHhCCCCCCEEEECCC--C-ccHHHHHHHHHhCCCEEEEChhH----------HHHHHHHHHHHHHCCCChhhE
Confidence 99999999875 4677775543 2 34689999999999999987531 112355566777788877665
Q ss_pred c
Q 025159 256 L 256 (257)
Q Consensus 256 a 256 (257)
.
T Consensus 205 i 205 (310)
T 2h9a_B 205 I 205 (310)
T ss_dssp E
T ss_pred E
Confidence 4
No 79
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=83.58 E-value=21 Score=30.81 Aligned_cols=148 Identities=13% Similarity=0.044 Sum_probs=90.2
Q ss_pred CChhHHHHHHHHHHHcCCceeeCCCC---CC---ChHH---HHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHH
Q 025159 37 SGSETTKLAILEAMKLGYRHFDTATL---YQ---TEQP---LGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPA 107 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~Gi~~~DtA~~---Yg---~e~~---lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~ 107 (257)
.+.++..+..+.+.+.|++.|..-.. |+ .-+. +=+++++.+ + +++-|..+.. ..++++...+-
T Consensus 148 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v~avr~a~--g-----~d~~l~vDan-~~~~~~~a~~~ 219 (382)
T 1rvk_A 148 ATPEDYGRFAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREAV--G-----PDIRLMIDAF-HWYSRTDALAL 219 (382)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHHH--C-----TTSEEEEECC-TTCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCcCccccccchHHHHHHHHHHHHHh--C-----CCCeEEEECC-CCCCHHHHHHH
Confidence 46777888888889999998864322 11 1111 123344431 2 3556666654 23455555444
Q ss_pred HHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeE-EEecCCC-HHHHHHHHHh
Q 025159 108 LQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKA-IGVSNFS-CKKLGDILAT 185 (257)
Q Consensus 108 l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~-iGvs~~~-~~~l~~~~~~ 185 (257)
+ +.|+.++++ ++..|... +-|+.+.++++.-.|-- .|=+-++ ++.++++++.
T Consensus 220 ~-~~l~~~~i~-----~iE~P~~~--------------------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~i~~ 273 (382)
T 1rvk_A 220 G-RGLEKLGFD-----WIEEPMDE--------------------QSLSSYKWLSDNLDIPVVGPESAAGKHWHRAEWIKA 273 (382)
T ss_dssp H-HHHHTTTCS-----EEECCSCT--------------------TCHHHHHHHHHHCSSCEEECSSCSSHHHHHHHHHHT
T ss_pred H-HHHHhcCCC-----EEeCCCCh--------------------hhHHHHHHHHhhCCCCEEEeCCccCcHHHHHHHHHc
Confidence 4 356666655 45565321 22566777776555543 3445567 8999999987
Q ss_pred CCCCCceeccccCCCC---CcHHHHHHHHHCCceEEEe
Q 025159 186 AKIPPAANQVEMNPLW---QQNKLREFCKAKDIQLAAY 220 (257)
Q Consensus 186 ~~~~p~~~q~~~~~~~---~~~~~~~~~~~~gi~v~~~ 220 (257)
...+ ++|+..+-+. .-..+.+.|+++|+.++.+
T Consensus 274 ~~~d--~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 309 (382)
T 1rvk_A 274 GACD--ILRTGVNDVGGITPALKTMHLAEAFGMECEVH 309 (382)
T ss_dssp TCCS--EEEECHHHHTSHHHHHHHHHHHHHTTCCEEEC
T ss_pred CCCC--EEeeCchhcCCHHHHHHHHHHHHHcCCeEeec
Confidence 6655 6766554322 2267899999999999987
No 80
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=83.49 E-value=23 Score=31.29 Aligned_cols=147 Identities=11% Similarity=0.041 Sum_probs=87.9
Q ss_pred CChhHHHHHHHHHHHcCCceeeCCCCCCChH---HHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHH
Q 025159 37 SGSETTKLAILEAMKLGYRHFDTATLYQTEQ---PLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLE 113 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~---~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~ 113 (257)
.+.++..+....+.+.|++.|..-.. ++-+ ..=+++++.+ + +++-|..... ..++.+...+-++. |+
T Consensus 197 ~~~e~~~~~a~~~~~~Gf~~vKik~g-~~~~~d~e~v~avR~a~--G-----~d~~l~vDan-~~~~~~~a~~~~~~-l~ 266 (441)
T 2hxt_A 197 YSDEKLVRLAKEAVADGFRTIKLKVG-ANVQDDIRRCRLARAAI--G-----PDIAMAVDAN-QRWDVGPAIDWMRQ-LA 266 (441)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECC-SCHHHHHHHHHHHHHHH--C-----SSSEEEEECT-TCCCHHHHHHHHHT-TG
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEccC-CCHHHHHHHHHHHHHhc--C-----CCCeEEEECC-CCCCHHHHHHHHHH-HH
Confidence 36777888888899999998874321 1211 1123445432 2 3445555543 23455554444433 66
Q ss_pred hhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHc-CCe-eEEEecCCCHHHHHHHHHhCCCCCc
Q 025159 114 NLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNL-GYT-KAIGVSNFSCKKLGDILATAKIPPA 191 (257)
Q Consensus 114 ~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-G~i-r~iGvs~~~~~~l~~~~~~~~~~p~ 191 (257)
.++++ ++..|... +-++.+.++++. +.| -..|=+-++++.+.++++....+
T Consensus 267 ~~~i~-----~iEqP~~~--------------------~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d-- 319 (441)
T 2hxt_A 267 EFDIA-----WIEEPTSP--------------------DDVLGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQAGAVD-- 319 (441)
T ss_dssp GGCCS-----CEECCSCT--------------------TCHHHHHHHHHHHTTSCEEECTTCCSHHHHHHHHHHTCCS--
T ss_pred hcCCC-----eeeCCCCH--------------------HHHHHHHHHHhhCCCCCEEEeCCcCCHHHHHHHHHcCCCC--
Confidence 66654 45565321 124556666665 233 34556677899999999877655
Q ss_pred eeccccCCCCC---cHHHHHHHHHCCceEEEe
Q 025159 192 ANQVEMNPLWQ---QNKLREFCKAKDIQLAAY 220 (257)
Q Consensus 192 ~~q~~~~~~~~---~~~~~~~~~~~gi~v~~~ 220 (257)
++|+..+-+.- -..+...|+++|+++..+
T Consensus 320 ~v~ik~~~~GGite~~~ia~~A~~~g~~~~~h 351 (441)
T 2hxt_A 320 LIQIDAARVGGVNENLAILLLAAKFGVRVFPH 351 (441)
T ss_dssp EECCCTTTSSHHHHHHHHHHHHHHTTCEECCC
T ss_pred EEEeCcceeCCHHHHHHHHHHHHHcCCeEEEe
Confidence 77776654322 257899999999998644
No 81
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=82.73 E-value=23 Score=30.58 Aligned_cols=150 Identities=11% Similarity=-0.004 Sum_probs=91.7
Q ss_pred ChhHHHHHHHHHHHcCCceeeCCCCCCChHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHhhCC
Q 025159 38 GSETTKLAILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLENLQL 117 (257)
Q Consensus 38 ~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~Lg~ 117 (257)
+.++..+..+.+.+.|++.|..--..++-+..-+.++...+. --+++-|..+.. ..++++ ...+.+++|.
T Consensus 145 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a----~g~~~~l~vDan-~~~~~~----~a~~~~~~l~- 214 (378)
T 2qdd_A 145 TPDQMLGLIAEAAAQGYRTHSAKIGGSDPAQDIARIEAISAG----LPDGHRVTFDVN-RAWTPA----IAVEVLNSVR- 214 (378)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHS----CCTTCEEEEECT-TCCCHH----HHHHHHTSCC-
T ss_pred CHHHHHHHHHHHHHHhhhheeecCCCCChHHHHHHHHHHHHH----hCCCCEEEEeCC-CCCCHH----HHHHHHHHhC-
Confidence 567778888888999999988643322322222333333211 123566666653 233332 3334555553
Q ss_pred CcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEE-EecCCCHHHHHHHHHhCCCCCceeccc
Q 025159 118 EYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAI-GVSNFSCKKLGDILATAKIPPAANQVE 196 (257)
Q Consensus 118 d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~p~~~q~~ 196 (257)
.++ ++..|. . -|+.+.++++.-.|--+ |=+-++++.++++++....+ ++|+.
T Consensus 215 --~~i-~iEqP~-------------------~---d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d--~v~ik 267 (378)
T 2qdd_A 215 --ARD-WIEQPC-------------------Q---TLDQCAHVARRVANPIMLDECLHEFSDHLAAWSRGACE--GVKIK 267 (378)
T ss_dssp --CCC-EEECCS-------------------S---SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCS--EEEEC
T ss_pred --CCc-EEEcCC-------------------C---CHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCC--EEEec
Confidence 466 676662 1 46777788876555433 34456889999998876655 66665
Q ss_pred cCCCCC---cHHHHHHHHHCCceEEEecCCC
Q 025159 197 MNPLWQ---QNKLREFCKAKDIQLAAYAPLG 224 (257)
Q Consensus 197 ~~~~~~---~~~~~~~~~~~gi~v~~~~pl~ 224 (257)
.+-+.- -..+.+.|+++|+.++..+-+.
T Consensus 268 ~~~~GGi~~~~~i~~~A~~~g~~~~~~~~~e 298 (378)
T 2qdd_A 268 PNRVGGLTRARQIRDFGVSVGWQMHIEDVGG 298 (378)
T ss_dssp HHHHTSHHHHHHHHHHHHHHTCEEEECCSSC
T ss_pred ccccCCHHHHHHHHHHHHHcCCeEEecCCCC
Confidence 543322 2578999999999999885443
No 82
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=82.65 E-value=19 Score=30.98 Aligned_cols=151 Identities=7% Similarity=-0.019 Sum_probs=90.2
Q ss_pred ChhHHHHHHHHHHHc-CCceeeCCCCCCC---hHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHH
Q 025159 38 GSETTKLAILEAMKL-GYRHFDTATLYQT---EQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLE 113 (257)
Q Consensus 38 ~~~~~~~~l~~Al~~-Gi~~~DtA~~Yg~---e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~ 113 (257)
+.++..+..+.+++. |++.|-.--.... +...=+++|+.+ | +++-|..... ..++.+...+ +-+.|+
T Consensus 139 ~~~~~~~~a~~~~~~~G~~~~K~K~g~~~~~~d~~~v~avR~a~--g-----~~~~l~vDan-~~~~~~~a~~-~~~~l~ 209 (367)
T 3dg3_A 139 DPVKMVAEAERIRETYGINTFKVKVGRRPVQLDTAVVRALRERF--G-----DAIELYVDGN-RGWSAAESLR-AMREMA 209 (367)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEEECCCSSTHHHHHHHHHHHHHH--G-----GGSEEEEECT-TCSCHHHHHH-HHHHTT
T ss_pred CHHHHHHHHHHHHHhcCccEEEEeeCCChhhhHHHHHHHHHHHh--C-----CCCEEEEECC-CCCCHHHHHH-HHHHHH
Confidence 667778888888888 9998754332221 222234455542 1 4445555543 3344433222 223444
Q ss_pred hhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCee-EEEecCCCHHHHHHHHHhCCCCCce
Q 025159 114 NLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTK-AIGVSNFSCKKLGDILATAKIPPAA 192 (257)
Q Consensus 114 ~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~p~~ 192 (257)
.++ +.+++.|... +-++.+.++++.-.|- ..|=+-++++.+.++++....+ +
T Consensus 210 ~~~-----i~~iEqP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d--~ 262 (367)
T 3dg3_A 210 DLD-----LLFAEELCPA--------------------DDVLSRRRLVGQLDMPFIADESVPTPADVTREVLGGSAT--A 262 (367)
T ss_dssp TSC-----CSCEESCSCT--------------------TSHHHHHHHHHHCSSCEEECTTCSSHHHHHHHHHHTSCS--E
T ss_pred HhC-----CCEEECCCCc--------------------ccHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCC--E
Confidence 444 4455666321 1246667777765553 4466678899999998877665 6
Q ss_pred eccccCCC--CCcHHHHHHHHHCCceEEEecCCC
Q 025159 193 NQVEMNPL--WQQNKLREFCKAKDIQLAAYAPLG 224 (257)
Q Consensus 193 ~q~~~~~~--~~~~~~~~~~~~~gi~v~~~~pl~ 224 (257)
+|+...-+ ..-..+.+.|+++|+.++..+.+.
T Consensus 263 v~~k~~~~Git~~~~ia~~A~~~gi~~~~~~~~e 296 (367)
T 3dg3_A 263 ISIKTARTGFTGSTRVHHLAEGLGLDMVMGNQID 296 (367)
T ss_dssp EEECHHHHTTHHHHHHHHHHHHHTCEEEECCSSC
T ss_pred EEeehhhhhHHHHHHHHHHHHHcCCeEEECCcCC
Confidence 66655443 123678999999999999876554
No 83
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=82.33 E-value=13 Score=31.96 Aligned_cols=152 Identities=13% Similarity=0.067 Sum_probs=91.1
Q ss_pred CChhHHHHHHHHHHHcCCceeeCCCCCC--ChHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHh
Q 025159 37 SGSETTKLAILEAMKLGYRHFDTATLYQ--TEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLEN 114 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg--~e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~ 114 (257)
.+.++..+..+.+++.|++.|..--... .+...=+++|+.+ + +++-|...... .++++...+ +-+.|+.
T Consensus 139 ~~~~~~~~~a~~~~~~G~~~~K~K~G~~~~~d~~~v~avR~~~--g-----~~~~l~vDan~-~~~~~~a~~-~~~~l~~ 209 (356)
T 3ro6_B 139 KPVEETLAEAREHLALGFRVLKVKLCGDEEQDFERLRRLHETL--A-----GRAVVRVDPNQ-SYDRDGLLR-LDRLVQE 209 (356)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHHHHHH--T-----TSSEEEEECTT-CCCHHHHHH-HHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHHh--C-----CCCEEEEeCCC-CCCHHHHHH-HHHHHHh
Confidence 3677788888888999999987543221 1222234455542 2 34555556532 334443332 3356666
Q ss_pred hCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe-eEEEecCCCHHHHHHHHHhC-CCCCce
Q 025159 115 LQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT-KAIGVSNFSCKKLGDILATA-KIPPAA 192 (257)
Q Consensus 115 Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~-~~~p~~ 192 (257)
++++++ ..|... +-++.+.+++++-.| -..|=+-++++.+.++++.. ..+ +
T Consensus 210 ~~i~~i-----EqP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~~d--~ 262 (356)
T 3ro6_B 210 LGIEFI-----EQPFPA--------------------GRTDWLRALPKAIRRRIAADESLLGPADAFALAAPPAACG--I 262 (356)
T ss_dssp TTCCCE-----ECCSCT--------------------TCHHHHHTSCHHHHHTEEESTTCCSHHHHHHHHSSSCSCS--E
T ss_pred cCCCEE-----ECCCCC--------------------CcHHHHHHHHhcCCCCEEeCCcCCCHHHHHHHHhcCCcCC--E
Confidence 666554 455321 124556666654333 34566778899999988865 444 6
Q ss_pred eccccCCCC---CcHHHHHHHHHCCceEEEecCCC
Q 025159 193 NQVEMNPLW---QQNKLREFCKAKDIQLAAYAPLG 224 (257)
Q Consensus 193 ~q~~~~~~~---~~~~~~~~~~~~gi~v~~~~pl~ 224 (257)
+|+..+-+. .-..+.+.|+++|+.++..+.+.
T Consensus 263 v~~k~~~~GGit~~~~i~~~a~~~gi~~~~~~~~e 297 (356)
T 3ro6_B 263 FNIKLMKCGGLAPARRIATIAETAGIDLMWGCMDE 297 (356)
T ss_dssp EEECHHHHCSHHHHHHHHHHHHHHTCEEEECCCSC
T ss_pred EEEcccccCCHHHHHHHHHHHHHcCCEEEecCCcc
Confidence 766654332 23678999999999999876664
No 84
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=82.02 E-value=12 Score=32.51 Aligned_cols=153 Identities=10% Similarity=0.076 Sum_probs=93.7
Q ss_pred CChhHHHHHHHHHHHcCCceeeCCCCC----CC-hHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHH
Q 025159 37 SGSETTKLAILEAMKLGYRHFDTATLY----QT-EQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKS 111 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~Gi~~~DtA~~Y----g~-e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~s 111 (257)
.+.++..+.++.+++.|++.|-.--.. +. +.-+ +.++... +. --+++-|...... .++++ ...+.
T Consensus 144 ~~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~~~~~~~d~-~~v~avR-~a---~G~~~~L~vDaN~-~~~~~----~A~~~ 213 (386)
T 3fv9_G 144 DTPEAMRAKVARHRAQGFKGHSIKIGASEAEGGPALDA-ERITACL-AD---RQPGEWYLADANN-GLTVE----HALRM 213 (386)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCCCTTTTHHHHHH-HHHHHHT-TT---CCTTCEEEEECTT-CCCHH----HHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeccCCCCCCCHHHHH-HHHHHHH-HH---cCCCCeEEEECCC-CCCHH----HHHHH
Confidence 467888888889999999988643221 11 1111 1223221 11 1245666666533 23332 23345
Q ss_pred HHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe-eEEEecCCCHHHHHHHHHhCCCCC
Q 025159 112 LENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT-KAIGVSNFSCKKLGDILATAKIPP 190 (257)
Q Consensus 112 L~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~p 190 (257)
+++|. +.+++ ++..|.. -++.+.+++++-.| -..|=|-++...+.++++...++
T Consensus 214 ~~~l~-~~~~i-~iEeP~~----------------------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~d- 268 (386)
T 3fv9_G 214 LSLLP-PGLDI-VLEAPCA----------------------SWAETKSLRARCALPLLLDELIQTETDLIAAIRDDLCD- 268 (386)
T ss_dssp HHHSC-SSCCC-EEECCCS----------------------SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHTTCCS-
T ss_pred HHHhh-ccCCc-EEecCCC----------------------CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCC-
Confidence 56663 34577 7777731 24667777776555 35566778999999998876655
Q ss_pred ceeccccCCCC---CcHHHHHHHHHCCceEEEecCCCC
Q 025159 191 AANQVEMNPLW---QQNKLREFCKAKDIQLAAYAPLGA 225 (257)
Q Consensus 191 ~~~q~~~~~~~---~~~~~~~~~~~~gi~v~~~~pl~~ 225 (257)
++|....-+. .-..+.+.|+++|+.++..+.+.+
T Consensus 269 -~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es 305 (386)
T 3fv9_G 269 -GVGLKVSKQGGITPMLRQRAIAAAAGMVMSVQDTVGS 305 (386)
T ss_dssp -EEEEEHHHHTSHHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred -EEEECccccCCHHHHHHHHHHHHHcCCEEEeCCCCCC
Confidence 7776654432 236789999999999997766543
No 85
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=81.61 E-value=26 Score=30.43 Aligned_cols=154 Identities=11% Similarity=0.109 Sum_probs=94.1
Q ss_pred CChhHHHHHHHHHHHcCCceeeCCCCCCC--hHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHh
Q 025159 37 SGSETTKLAILEAMKLGYRHFDTATLYQT--EQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLEN 114 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~--e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~ 114 (257)
.++++..+.++.+++.|++.|-.--.... +...=+++|+. --+++-|...... .++++...+ +-+.|+.
T Consensus 141 ~~~e~~~~~a~~~~~~Gf~~~KlK~g~~~~~d~~~v~avR~a-------~g~~~~L~vDaN~-~w~~~~A~~-~~~~l~~ 211 (379)
T 3r0u_A 141 GNVAETIQNIQNGVEANFTAIKVKTGADFNRDIQLLKALDNE-------FSKNIKFRFDANQ-GWNLAQTKQ-FIEEINK 211 (379)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECSSCHHHHHHHHHHHHHH-------CCTTSEEEEECTT-CCCHHHHHH-HHHHHHT
T ss_pred CCHHHHHHHHHHHHHcCCCEEeeecCCCHHHHHHHHHHHHHh-------cCCCCeEEEeCCC-CcCHHHHHH-HHHHHhh
Confidence 36777888888889999998865433221 22223445554 1234455555432 234433222 2233443
Q ss_pred hCCCc-ccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe-eEEEecCCCHHHHHHHHHhCCCCCce
Q 025159 115 LQLEY-IDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT-KAIGVSNFSCKKLGDILATAKIPPAA 192 (257)
Q Consensus 115 Lg~d~-lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~p~~ 192 (257)
| +++.++..|... +-++.+.++++.-.+ -..|=+-++...+.++++...++ +
T Consensus 212 ----~~~~l~~iEeP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d--~ 265 (379)
T 3r0u_A 212 ----YSLNVEIIEQPVKY--------------------YDIKAMAEITKFSNIPVVADESVFDAKDAERVIDEQACN--M 265 (379)
T ss_dssp ----SCCCEEEEECCSCT--------------------TCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHTTCCS--E
T ss_pred ----cCCCcEEEECCCCc--------------------ccHHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcCCCC--E
Confidence 2 567788877431 124666677765444 45677788999999998876655 6
Q ss_pred eccccCCCC---CcHHHHHHHHHCCceEEEecCCCC
Q 025159 193 NQVEMNPLW---QQNKLREFCKAKDIQLAAYAPLGA 225 (257)
Q Consensus 193 ~q~~~~~~~---~~~~~~~~~~~~gi~v~~~~pl~~ 225 (257)
+|....-+. .-..+.+.|+++|+.++..+.+.+
T Consensus 266 v~~k~~~~GGi~~~~~ia~~A~~~gi~~~~~~~~es 301 (379)
T 3r0u_A 266 INIKLAKTGGILEAQKIKKLADSAGISCMVGCMMES 301 (379)
T ss_dssp EEECHHHHTSHHHHHHHHHHHHHTTCEEEECCCSCC
T ss_pred EEECccccCCHHHHHHHHHHHHHcCCEEEEeCCCcc
Confidence 766654332 236789999999999998876643
No 86
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=81.56 E-value=25 Score=30.36 Aligned_cols=146 Identities=7% Similarity=-0.031 Sum_probs=87.4
Q ss_pred hHHHHHHHHHHHcCCceeeCCCCCCChHH---HHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHhhC
Q 025159 40 ETTKLAILEAMKLGYRHFDTATLYQTEQP---LGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLENLQ 116 (257)
Q Consensus 40 ~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~~---lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~Lg 116 (257)
++..+....+.+.|++.|..-...++-+. .=+++|+.+ | +++-|..... ..++.+...+-++ .|+.+
T Consensus 141 e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~a~--G-----~d~~l~vDan-~~~~~~~a~~~~~-~l~~~- 210 (382)
T 2gdq_A 141 SRSVSNVEAQLKKGFEQIKVKIGGTSFKEDVRHINALQHTA--G-----SSITMILDAN-QSYDAAAAFKWER-YFSEW- 210 (382)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECSSSCHHHHHHHHHHHHHHH--C-----TTSEEEEECT-TCCCHHHHHTTHH-HHTTC-
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhh--C-----CCCEEEEECC-CCCCHHHHHHHHH-HHhhc-
Confidence 77778888889999998875332222222 222344432 2 3555555653 2344444333333 24443
Q ss_pred CCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCee-EEEecCCCHHHHHHHHHhCCCCCceecc
Q 025159 117 LEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTK-AIGVSNFSCKKLGDILATAKIPPAANQV 195 (257)
Q Consensus 117 ~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~p~~~q~ 195 (257)
-++.++..|... +-++.+.++++.-.|- ..|=+-++++.++++++....+ ++|+
T Consensus 211 ---~~i~~iEqP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d--~v~i 265 (382)
T 2gdq_A 211 ---TNIGWLEEPLPF--------------------DQPQDYAMLRSRLSVPVAGGENMKGPAQYVPLLSQRCLD--IIQP 265 (382)
T ss_dssp ---SCEEEEECCSCS--------------------SCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCS--EECC
T ss_pred ---cCCeEEECCCCc--------------------ccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCC--EEec
Confidence 045567776321 1256677777765553 3344566899999999876655 7777
Q ss_pred ccCCCCC---cHHHHHHHHHCCceEEEe
Q 025159 196 EMNPLWQ---QNKLREFCKAKDIQLAAY 220 (257)
Q Consensus 196 ~~~~~~~---~~~~~~~~~~~gi~v~~~ 220 (257)
..+-+.- -..+.+.|+++|+.++..
T Consensus 266 k~~~~GGit~~~~i~~~A~~~g~~~~~~ 293 (382)
T 2gdq_A 266 DVMHVNGIDEFRDCLQLARYFGVRASAH 293 (382)
T ss_dssp CTTTTTHHHHHHHHHHHHHHHTCEECCC
T ss_pred CccccCCHHHHHHHHHHHHHcCCEEeec
Confidence 6654322 267899999999999887
No 87
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=81.56 E-value=26 Score=30.52 Aligned_cols=154 Identities=13% Similarity=0.096 Sum_probs=94.6
Q ss_pred CChhHHHHHHHHHHHcCCceeeCCCCC---CChHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHH
Q 025159 37 SGSETTKLAILEAMKLGYRHFDTATLY---QTEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLE 113 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~Gi~~~DtA~~Y---g~e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~ 113 (257)
.+.++..+.++.+++.|++.|=.--.. ..+...=+++|+.+ + ++-|..-.. ..++++.. .+.++
T Consensus 143 ~~~e~~~~~a~~~~~~G~~~iKlKvg~~~~~~d~~~v~avR~~~------~--~~~L~vDaN-~~w~~~~A----~~~~~ 209 (389)
T 3s5s_A 143 GSPERAEEAARRAAAMGFRALKVKVGGRLAASDPARIEAIHAAA------P--GASLILDGN-GGLTAGEA----LALVA 209 (389)
T ss_dssp SCSHHHHHHHHHHHHHTCCEEEEECCGGGTTTHHHHHHHHHHHC------T--TCEEEEECT-TCSCHHHH----HHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEecCCChHHHHHHHHHHHHhC------C--CCeEEEECC-CCCCHHHH----HHHHH
Confidence 366788888889999999987432211 12333344566651 2 223333322 23343332 23344
Q ss_pred hhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe-eEEEecCCCHHHHHHHHHhCCCCCce
Q 025159 114 NLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT-KAIGVSNFSCKKLGDILATAKIPPAA 192 (257)
Q Consensus 114 ~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~p~~ 192 (257)
+|..+.+++.++..|... +-++.+.+|.+.-.| -+.|=|-++...+.++++...++ +
T Consensus 210 ~L~~~~~~i~~iEeP~~~--------------------~d~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~~a~d--~ 267 (389)
T 3s5s_A 210 HARRLGADVALLEQPVPR--------------------DDWDGMKEVTRRAGVDVAADESAASAEDVLRVAAERAAT--V 267 (389)
T ss_dssp HHHHTTCEEEEEECCSCT--------------------TCHHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHTTCCS--E
T ss_pred HHhhCCCCeEEEECCCCc--------------------ccHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCC--E
Confidence 442134589999988542 124566677665444 46678889999999998876655 7
Q ss_pred eccccCC--CCCcHHHHHHHHHCCceEEEecCCCC
Q 025159 193 NQVEMNP--LWQQNKLREFCKAKDIQLAAYAPLGA 225 (257)
Q Consensus 193 ~q~~~~~--~~~~~~~~~~~~~~gi~v~~~~pl~~ 225 (257)
+|....- +..-..+.+.|+++|+.++..+.+.+
T Consensus 268 v~~k~~~GGit~~~~i~~~A~~~gi~~~~~~~~es 302 (389)
T 3s5s_A 268 VNIKLMKGGIAEALDIAAVARAAGLGLMIGGMVES 302 (389)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHTTCEEEECCSSCC
T ss_pred EEecCCCCCHHHHHHHHHHHHHcCCeEEecCCccc
Confidence 7766544 11125789999999999999877654
No 88
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=81.20 E-value=28 Score=30.66 Aligned_cols=146 Identities=15% Similarity=0.187 Sum_probs=89.3
Q ss_pred Ch-hHHHHHHHHHHHcCCceeeCCCCCC---ChHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHH
Q 025159 38 GS-ETTKLAILEAMKLGYRHFDTATLYQ---TEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLE 113 (257)
Q Consensus 38 ~~-~~~~~~l~~Al~~Gi~~~DtA~~Yg---~e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~ 113 (257)
+. ++..+....+.+.|++.|..--... ..+.+ +++++.+ + +++.|..... ..++.+...+-++. |+
T Consensus 184 ~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~d~e~v-~avR~av--G-----~d~~l~vDan-~~~~~~eai~~~~~-L~ 253 (428)
T 3bjs_A 184 QPKESLAEEAQEYIARGYKALKLRIGDAARVDIERV-RHVRKVL--G-----DEVDILTDAN-TAYTMADARRVLPV-LA 253 (428)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCSCHHHHHHHH-HHHHHHH--C-----TTSEEEEECT-TCCCHHHHHHHHHH-HH
T ss_pred ChHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHH-HHHHHhc--C-----CCCEEEEECC-CCCCHHHHHHHHHH-HH
Confidence 56 7777888888899999886532211 11222 3444432 2 3455555543 34456665555544 77
Q ss_pred hhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCC-ee-EEEecCCCHHHHHHHHHhCCCCCc
Q 025159 114 NLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGY-TK-AIGVSNFSCKKLGDILATAKIPPA 191 (257)
Q Consensus 114 ~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~-ir-~iGvs~~~~~~l~~~~~~~~~~p~ 191 (257)
.+++++ +..|... +-++.+.++++.-. |- ..|=+-++++.++++++....+
T Consensus 254 ~~~i~~-----iEqP~~~--------------------~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d-- 306 (428)
T 3bjs_A 254 EIQAGW-----LEEPFAC--------------------NDFASYREVAKITPLVPIAAGENHYTRFEFGQMLDAGAVQ-- 306 (428)
T ss_dssp HTTCSC-----EECCSCT--------------------TCHHHHHHHTTTCSSSCEEECTTCCSHHHHHHHHTTCCEE--
T ss_pred hcCCCE-----EECCCCc--------------------cCHHHHHHHHHhCCCCcEEcCCCcCCHHHHHHHHHhCCCC--
Confidence 777764 4555321 22567777777544 43 3344556889999988765544
Q ss_pred eeccccCCCCC---cHHHHHHHHHCCceEEEe
Q 025159 192 ANQVEMNPLWQ---QNKLREFCKAKDIQLAAY 220 (257)
Q Consensus 192 ~~q~~~~~~~~---~~~~~~~~~~~gi~v~~~ 220 (257)
++|+..+-..- -..+.+.|+++|+.++..
T Consensus 307 ~v~ik~~~~GGitea~~ia~~A~~~gi~~~~~ 338 (428)
T 3bjs_A 307 VWQPDLSKCGGITEGIRIAAMASAYRIPINAH 338 (428)
T ss_dssp EECCBTTTSSCHHHHHHHHHHHHHTTCCBCCB
T ss_pred EEEeCccccCCHHHHHHHHHHHHHcCCeEEec
Confidence 77776654332 267899999999998877
No 89
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=80.92 E-value=28 Score=30.43 Aligned_cols=150 Identities=14% Similarity=0.109 Sum_probs=91.7
Q ss_pred CChhHHHHHHHHHHHcCCceeeCCCC--CC-------Ch------HHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCCh
Q 025159 37 SGSETTKLAILEAMKLGYRHFDTATL--YQ-------TE------QPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHR 101 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~Gi~~~DtA~~--Yg-------~e------~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~ 101 (257)
.+.++..+..+.+++.|++.|-.-.. |. +. ...=+++|+.+ -+++-|...... .++.
T Consensus 150 ~~~e~~~~~a~~~~~~G~~~~KlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~-------G~d~~l~vDan~-~~~~ 221 (404)
T 4e5t_A 150 NDADMAAEAAAKAVDQGFTAVKFDPAGAYTIYDGHQPSLEDLERSEAFCKQIRAAV-------GTKADLLFGTHG-QFTV 221 (404)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCSBCCCHHHHHHHHHHHHHHHHHH-------GGGSEEEECCCS-CBCH
T ss_pred CCHHHHHHHHHHHHHcCCCEEeeCCCCCCcccccccccHHHHHHHHHHHHHHHHHc-------CCCCeEEEeCCC-CcCH
Confidence 46788888888999999999875322 11 11 11223444442 245566666533 3344
Q ss_pred hhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCee-EEEecCCCHHHHH
Q 025159 102 ELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTK-AIGVSNFSCKKLG 180 (257)
Q Consensus 102 ~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~ 180 (257)
+...+ +-+.|+.++++ ++..|... +-++.+.++++.-.|- ..|=+-++++.+.
T Consensus 222 ~~A~~-~~~~l~~~~i~-----~iEeP~~~--------------------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~ 275 (404)
T 4e5t_A 222 SGAKR-LARRLEAYDPL-----WFEEPIPP--------------------EKPEDMAEVARYTSIPVATGERLCTKYEFS 275 (404)
T ss_dssp HHHHH-HHHHHGGGCCS-----EEECCSCT--------------------TCHHHHHHHHHHCSSCEEECTTCCHHHHHH
T ss_pred HHHHH-HHHHHhhcCCc-----EEECCCCc--------------------ccHHHHHHHHhhCCCCEEeCCCcCCHHHHH
Confidence 43332 33456666644 45666321 1245677777765553 3455667888999
Q ss_pred HHHHhCCCCCceeccccCCCCC---cHHHHHHHHHCCceEEEecC
Q 025159 181 DILATAKIPPAANQVEMNPLWQ---QNKLREFCKAKDIQLAAYAP 222 (257)
Q Consensus 181 ~~~~~~~~~p~~~q~~~~~~~~---~~~~~~~~~~~gi~v~~~~p 222 (257)
++++...++ ++|....-+.- -..+.+.|+++|+.+..+..
T Consensus 276 ~~i~~~a~d--~v~~d~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 318 (404)
T 4e5t_A 276 RVLETGAAS--ILQMNLGRVGGLLEAKKIAAMAECHSAQIAPHLY 318 (404)
T ss_dssp HHHHHTCCS--EECCCTTTSSCHHHHHHHHHHHHHTTCEECCCCS
T ss_pred HHHHhCCCC--EEecCccccCCHHHHHHHHHHHHHcCCEEeecCC
Confidence 998877665 77777665432 26789999999999977653
No 90
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=80.62 E-value=24 Score=29.40 Aligned_cols=136 Identities=10% Similarity=0.014 Sum_probs=79.5
Q ss_pred ChhhHHHHHHHHHHhhCCCcccEEEee-cCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEEecCCCHHH
Q 025159 100 HRELVVPALQKSLENLQLEYIDLYVIH-WPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGVSNFSCKK 178 (257)
Q Consensus 100 ~~~~i~~~l~~sL~~Lg~d~lDl~~lh-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~ 178 (257)
+++.+.+..++. -+-|.|.||+---- +|..... ......+.+...++.+++.+. -|.|-+++++.
T Consensus 27 ~~~~a~~~a~~~-v~~GAdiIDIGgestrpga~~v-----------~~~eE~~Rv~pvi~~l~~~~~--piSIDT~~~~v 92 (280)
T 1eye_A 27 DLDDAVKHGLAM-AAAGAGIVDVGGESSRPGATRV-----------DPAVETSRVIPVVKELAAQGI--TVSIDTMRADV 92 (280)
T ss_dssp SHHHHHHHHHHH-HHTTCSEEEEECC-------------------------HHHHHHHHHHHHHTTC--CEEEECSCHHH
T ss_pred CHHHHHHHHHHH-HHCCCCEEEECCccCCCCCCCC-----------CHHHHHHHHHHHHHHhhcCCC--EEEEeCCCHHH
Confidence 445555554333 34688899987421 1211000 011236677778888887643 48999999999
Q ss_pred HHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCCCCC-CC---CccC--------hHHHHHHHH
Q 025159 179 LGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTIWG-SN---RVME--------CEVLKEIAE 246 (257)
Q Consensus 179 l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~l~~-~~---~~~~--------~~~~~~ia~ 246 (257)
++++++... +.+| ..|......++++.++++|++++.+.-- |.-.. .. .+.. -....+.|.
T Consensus 93 a~aAl~aGa--~iIN--dvsg~~~d~~m~~~~a~~~~~vVlmh~~---G~p~tm~~~~~~y~dv~~~v~~~l~~~i~~a~ 165 (280)
T 1eye_A 93 ARAALQNGA--QMVN--DVSGGRADPAMGPLLAEADVPWVLMHWR---AVSADTPHVPVRYGNVVAEVRADLLASVADAV 165 (280)
T ss_dssp HHHHHHTTC--CEEE--ETTTTSSCTTHHHHHHHHTCCEEEECCC---CSCTTCTTSCCCCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCC--CEEE--ECCCCCCCHHHHHHHHHhCCeEEEEcCC---CCCcchhhcCcchhHHHHHHHHHHHHHHHHHH
Confidence 999999743 4455 3333333457999999999999998642 32111 11 0111 124455677
Q ss_pred HhCCCccccc
Q 025159 247 AKGKTVAQVL 256 (257)
Q Consensus 247 ~~~~s~~qva 256 (257)
++|+.+.++.
T Consensus 166 ~~Gi~~~~Ii 175 (280)
T 1eye_A 166 AAGVDPARLV 175 (280)
T ss_dssp HTTCCGGGEE
T ss_pred HcCCChhhEE
Confidence 8898877764
No 91
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=80.62 E-value=28 Score=30.27 Aligned_cols=150 Identities=11% Similarity=0.043 Sum_probs=90.6
Q ss_pred ChhHHHHHHHHHHHcCCceeeCCC-CCC-Ch-HHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCC--ChhhHHHHHHHHH
Q 025159 38 GSETTKLAILEAMKLGYRHFDTAT-LYQ-TE-QPLGDAIAEALSTGIIKSRDELFIASKLWCSDA--HRELVVPALQKSL 112 (257)
Q Consensus 38 ~~~~~~~~l~~Al~~Gi~~~DtA~-~Yg-~e-~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~--~~~~i~~~l~~sL 112 (257)
+.++..+....+.+.|++.|..-. ..| +. +..-+.++...+. --+++-|..+... .+ +.+...+-++. |
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~iKik~spvG~~~~~~~~e~v~avr~a----~G~d~~l~vDan~-~~~~~~~~a~~~~~~-l 218 (401)
T 2hzg_A 145 TPQETLERARAARRDGFAAVKFGWGPIGRGTVAADADQIMAAREG----LGPDGDLMVDVGQ-IFGEDVEAAAARLPT-L 218 (401)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEESTTTTSSCHHHHHHHHHHHHHH----HCSSSEEEEECTT-TTTTCHHHHHTTHHH-H
T ss_pred CHHHHHHHHHHHHHhCCCeEEEcCCCCCCCHHHHHHHHHHHHHHH----hCCCCeEEEECCC-CCCCCHHHHHHHHHH-H
Confidence 677788888889999999987530 023 22 2222333322111 1135566666643 34 55555444444 7
Q ss_pred HhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHH-cCCeeEEE-ecCCCHHHHHHHHHhCCCCC
Q 025159 113 ENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQN-LGYTKAIG-VSNFSCKKLGDILATAKIPP 190 (257)
Q Consensus 113 ~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~G~ir~iG-vs~~~~~~l~~~~~~~~~~p 190 (257)
+.+++++ +..|.. .+-|+.+.++++ .-.|--++ =+-++++.++++++....+
T Consensus 219 ~~~~i~~-----iEqP~~--------------------~~d~~~~~~l~~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d- 272 (401)
T 2hzg_A 219 DAAGVLW-----LEEPFD--------------------AGALAAHAALAGRGARVRIAGGEAAHNFHMAQHLMDYGRIG- 272 (401)
T ss_dssp HHTTCSE-----EECCSC--------------------TTCHHHHHHHHTTCCSSEEEECTTCSSHHHHHHHHHHSCCS-
T ss_pred HhcCCCE-----EECCCC--------------------ccCHHHHHHHHhhCCCCCEEecCCcCCHHHHHHHHHCCCCC-
Confidence 7777654 455532 123677778887 55554343 3455789999999876655
Q ss_pred ceeccccCCCCC---cHHHHHHHHHCCceEEEe
Q 025159 191 AANQVEMNPLWQ---QNKLREFCKAKDIQLAAY 220 (257)
Q Consensus 191 ~~~q~~~~~~~~---~~~~~~~~~~~gi~v~~~ 220 (257)
++|+..+-+.- -..+.+.|+++|+.++.+
T Consensus 273 -~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h 304 (401)
T 2hzg_A 273 -FIQIDCGRIGGLGPAKRVADAAQARGITYVNH 304 (401)
T ss_dssp -EEEECHHHHTSHHHHHHHHHHHHHHTCEEEEC
T ss_pred -EEEeCcchhCCHHHHHHHHHHHHHcCCEEecC
Confidence 66665543322 257899999999999977
No 92
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=80.60 E-value=15 Score=31.82 Aligned_cols=150 Identities=11% Similarity=0.053 Sum_probs=88.7
Q ss_pred ChhHHHHHHHHHHHcCCceeeCCCCCCC---hHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHh
Q 025159 38 GSETTKLAILEAMKLGYRHFDTATLYQT---EQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLEN 114 (257)
Q Consensus 38 ~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~---e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~ 114 (257)
+.++..+.++.+++.|++.|-.--.... +...=+++|+.+ -+++-|...... .++.+...+ +-+.|+.
T Consensus 146 ~~~~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~~-------g~~~~l~vDan~-~~~~~~A~~-~~~~l~~ 216 (377)
T 3my9_A 146 DFDADLERMRAMVPAGHTVFKMKTGVKPHAEELRILETMRGEF-------GERIDLRLDFNQ-ALTPFGAMK-ILRDVDA 216 (377)
T ss_dssp SHHHHHHHHHHHTTTTCCEEEEECSSSCHHHHHHHHHHHHHHH-------GGGSEEEEECTT-CCCTTTHHH-HHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCcHHHHHHHHHHHHHHh-------CCCCeEEEeCCC-CcCHHHHHH-HHHHHhh
Confidence 5566666777888889998864332221 222233455542 144555556532 233343332 3445666
Q ss_pred hCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe-eEEEecCCCHHHHHHHHHhCCCCCcee
Q 025159 115 LQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT-KAIGVSNFSCKKLGDILATAKIPPAAN 193 (257)
Q Consensus 115 Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~p~~~ 193 (257)
+++++ +..|... +-++.+.++++.-.| -..|=+-+++..+.++++....+ ++
T Consensus 217 ~~i~~-----iEqP~~~--------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d--~v 269 (377)
T 3my9_A 217 FRPTF-----IEQPVPR--------------------RHLDAMAGFAAALDTPILADESCFDAVDLMEVVRRQAAD--AI 269 (377)
T ss_dssp TCCSC-----EECCSCT--------------------TCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCS--EE
T ss_pred cCCCE-----EECCCCc--------------------cCHHHHHHHHHhCCCCEEECCccCCHHHHHHHHHcCCCC--EE
Confidence 66544 4555321 125667777775444 34566778899999998877655 66
Q ss_pred ccccCCCC---CcHHHHHHHHHCCceEEEecCC
Q 025159 194 QVEMNPLW---QQNKLREFCKAKDIQLAAYAPL 223 (257)
Q Consensus 194 q~~~~~~~---~~~~~~~~~~~~gi~v~~~~pl 223 (257)
|...+-+. .-..+.+.|+++|+.++..+.+
T Consensus 270 ~~k~~~~GGit~~~~i~~~a~~~gi~~~~~~~~ 302 (377)
T 3my9_A 270 SVKIMKCGGLMKAQSLMAIADTAGLPGYGGTLW 302 (377)
T ss_dssp ECCHHHHTSHHHHHHHHHHHHHHTCCEECCEEC
T ss_pred EecccccCCHHHHHHHHHHHHHcCCeEecCCCC
Confidence 66554332 2367899999999999765544
No 93
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=80.54 E-value=15 Score=31.81 Aligned_cols=149 Identities=17% Similarity=0.123 Sum_probs=90.3
Q ss_pred ChhHHHHHHHHHHHcCCceeeCCCC-CC-C-h--HHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCC-hhhHHHHHHHH
Q 025159 38 GSETTKLAILEAMKLGYRHFDTATL-YQ-T-E--QPLGDAIAEALSTGIIKSRDELFIASKLWCSDAH-RELVVPALQKS 111 (257)
Q Consensus 38 ~~~~~~~~l~~Al~~Gi~~~DtA~~-Yg-~-e--~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~-~~~i~~~l~~s 111 (257)
+.++..+..+.+++.|++.|..-.. +| + + ...=+++|+.+ + +++-|...... .++ ++...+ +-+.
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKlk~g~~g~~~~~d~~~v~avR~a~--g-----~~~~l~vDan~-~~~d~~~A~~-~~~~ 216 (374)
T 3sjn_A 146 KPEDNVAIVQGLKDQGFSSIKFGGGVMGDDPDTDYAIVKAVREAA--G-----PEMEVQIDLAS-KWHTCGHSAM-MAKR 216 (374)
T ss_dssp SGGGGHHHHHHHHTTTCSEEEEECTTTTSCHHHHHHHHHHHHHHH--C-----SSSEEEEECTT-TTCSHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCCCCCHHHHHHHHHHHHHHh--C-----CCCeEEEECCC-CCCCHHHHHH-HHHH
Confidence 3477888889999999999875443 22 2 1 12223445442 2 45555556533 233 333222 2334
Q ss_pred HHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCee-EEEecCCCHHHHHHHHHhCCCCC
Q 025159 112 LENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTK-AIGVSNFSCKKLGDILATAKIPP 190 (257)
Q Consensus 112 L~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~p 190 (257)
|+.+++ .++..|... +-++.+.++++.-.|- ..|=+-++++.+.++++...++
T Consensus 217 l~~~~i-----~~iEqP~~~--------------------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d- 270 (374)
T 3sjn_A 217 LEEFNL-----NWIEEPVLA--------------------DSLISYEKLSRQVSQKIAGGESLTTRYEFQEFITKSNAD- 270 (374)
T ss_dssp SGGGCC-----SEEECSSCT--------------------TCHHHHHHHHHHCSSEEEECTTCCHHHHHHHHHHHHCCS-
T ss_pred hhhcCc-----eEEECCCCc--------------------ccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCC-
Confidence 555554 455666321 1256677777765553 4455667888899998876655
Q ss_pred ceeccccCCCCC---cHHHHHHHHHCCceEEEecC
Q 025159 191 AANQVEMNPLWQ---QNKLREFCKAKDIQLAAYAP 222 (257)
Q Consensus 191 ~~~q~~~~~~~~---~~~~~~~~~~~gi~v~~~~p 222 (257)
++|....-+.- -..+.+.|+++|+.++.++.
T Consensus 271 -~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 304 (374)
T 3sjn_A 271 -IVQPDITRCGGITEMKKIYDIAQMNGTQLIPHGF 304 (374)
T ss_dssp -EECCBTTTSSHHHHHHHHHHHHHHHTCEECCBCC
T ss_pred -EEEeCccccCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 77777655432 26789999999999988776
No 94
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=80.13 E-value=18 Score=29.77 Aligned_cols=130 Identities=15% Similarity=0.027 Sum_probs=75.9
Q ss_pred ChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEEecCCCHHHH
Q 025159 100 HRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGVSNFSCKKL 179 (257)
Q Consensus 100 ~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l 179 (257)
+.+.+.+..++.. .-|.|.||+-.=..+ .+.++-++.+....++-.=--|.|-+++++.+
T Consensus 23 ~~~~a~~~a~~~v-~~GAdiIDIg~g~~~-------------------v~~~ee~~rvv~~i~~~~~~pisIDT~~~~v~ 82 (262)
T 1f6y_A 23 DPAPVQEWARRQE-EGGARALDLNVGPAV-------------------QDKVSAMEWLVEVTQEVSNLTLCLDSTNIKAI 82 (262)
T ss_dssp CHHHHHHHHHHHH-HHTCSEEEEBCC-----------------------CHHHHHHHHHHHHHTTCCSEEEEECSCHHHH
T ss_pred CHHHHHHHHHHHH-HCCCcEEEECCCCCC-------------------CChHHHHHHHHHHHHHhCCCeEEEeCCCHHHH
Confidence 3455555555444 579888888651111 11333333333333331112488999999999
Q ss_pred HHHHHhCCCCCceeccccCCCCCc--HHHHHHHHHCCceEEEecCCCCCCCCCCCCCcc----ChHHHHHHHHHhCCCcc
Q 025159 180 GDILATAKIPPAANQVEMNPLWQQ--NKLREFCKAKDIQLAAYAPLGARGTIWGSNRVM----ECEVLKEIAEAKGKTVA 253 (257)
Q Consensus 180 ~~~~~~~~~~p~~~q~~~~~~~~~--~~~~~~~~~~gi~v~~~~pl~~~G~l~~~~~~~----~~~~~~~ia~~~~~s~~ 253 (257)
++.++.+.-.+.+| ..|.. .+ .++++.++++|++++.+..-.. |. +.... .-....+.|.+.|+++.
T Consensus 83 ~aAl~a~~Ga~iIN--dvs~~-~d~~~~~~~~~a~~~~~vvlmh~~~~-G~---p~t~~~~~~~~~~~~~~a~~~Gi~~~ 155 (262)
T 1f6y_A 83 EAGLKKCKNRAMIN--STNAE-REKVEKLFPLAVEHGAALIGLTMNKT-GI---PKDSDTRLAFAMELVAAADEFGLPME 155 (262)
T ss_dssp HHHHHHCSSCEEEE--EECSC-HHHHHHHHHHHHHTTCEEEEESCCSS-CS---CSSHHHHHHHHHHHHHHHHHHTCCGG
T ss_pred HHHHhhCCCCCEEE--ECCCC-cccHHHHHHHHHHhCCcEEEEcCCCC-CC---CCCHHHHHHHHHHHHHHHHHCCCCcc
Confidence 99999854344455 33333 23 3799999999999999864222 32 11111 11445566788899877
Q ss_pred ccc
Q 025159 254 QVL 256 (257)
Q Consensus 254 qva 256 (257)
++.
T Consensus 156 ~Ii 158 (262)
T 1f6y_A 156 DLY 158 (262)
T ss_dssp GEE
T ss_pred cEE
Confidence 664
No 95
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=79.87 E-value=30 Score=30.13 Aligned_cols=151 Identities=10% Similarity=0.056 Sum_probs=94.4
Q ss_pred CChhHHHHHHHHHHHcCCceeeCCCCC-C--ChHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHH
Q 025159 37 SGSETTKLAILEAMKLGYRHFDTATLY-Q--TEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLE 113 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~Gi~~~DtA~~Y-g--~e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~ 113 (257)
.+.++..+.++.+++.|++.|-.--.- . .+...=+++|+.+ + -+++-|...... .++++ ...+.++
T Consensus 163 ~~~e~~~~~a~~~~~~G~~~~KlKvg~~~~~~d~~~v~avR~a~--g----g~~~~L~vDaN~-~w~~~----~A~~~~~ 231 (391)
T 4e8g_A 163 GQPDEIARIAAEKVAEGFPRLQIKIGGRPVEIDIETVRKVWERI--R----GTGTRLAVDGNR-SLPSR----DALRLSR 231 (391)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCSSCHHHHHHHHHHHHHHH--T----TTTCEEEEECTT-CCCHH----HHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEcCCCCCHHHHHHHHHHHHHHh--C----CCCCeEEEeCCC-CCCHH----HHHHHHH
Confidence 367888888888999999988643322 1 1222223444431 1 145556666533 23333 2334445
Q ss_pred hhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe-eEEEecCCCHHHHHHHHHhCCCCCce
Q 025159 114 NLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT-KAIGVSNFSCKKLGDILATAKIPPAA 192 (257)
Q Consensus 114 ~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~p~~ 192 (257)
+|. + +++ ++..|.. -++.+.++++.-.| -+.|=+-++...+.++++...++ +
T Consensus 232 ~L~-~-~~i-~iEeP~~----------------------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~d--~ 284 (391)
T 4e8g_A 232 ECP-E-IPF-VLEQPCN----------------------TLEEIAAIRGRVQHGIYLDESGEDLSTVIRAAGQGLCD--G 284 (391)
T ss_dssp HCT-T-SCE-EEESCSS----------------------SHHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTCCS--E
T ss_pred HHh-h-cCe-EEecCCc----------------------cHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCC--E
Confidence 554 2 477 7777711 25667788776555 35677788999999998876655 7
Q ss_pred eccccCCCC---CcHHHHHHHHHCCceEEEecCCCC
Q 025159 193 NQVEMNPLW---QQNKLREFCKAKDIQLAAYAPLGA 225 (257)
Q Consensus 193 ~q~~~~~~~---~~~~~~~~~~~~gi~v~~~~pl~~ 225 (257)
+|....-+. .-..+.+.|+++|+.++..+.+.+
T Consensus 285 v~ik~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es 320 (391)
T 4e8g_A 285 FGMKLTRIGGLQQMAAFRDICEARALPHSCDDAWGG 320 (391)
T ss_dssp EEEEHHHHTSHHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred EEeCccccCCHHHHHHHHHHHHHcCCeEEeCCcCCC
Confidence 777654332 236789999999999998876653
No 96
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=79.66 E-value=18 Score=31.49 Aligned_cols=148 Identities=13% Similarity=0.065 Sum_probs=88.1
Q ss_pred hhHHHHHHHHHHHcCCceeeCCCCCCC--hHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHhhC
Q 025159 39 SETTKLAILEAMKLGYRHFDTATLYQT--EQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLENLQ 116 (257)
Q Consensus 39 ~~~~~~~l~~Al~~Gi~~~DtA~~Yg~--e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~Lg 116 (257)
.++..+..+.+++.|++.|..--.... ....=+++|+.+ + +++-|..... ..++++...+ +-+.|+.++
T Consensus 156 ~e~~~~~a~~~~~~G~~~iKlK~g~~~~~d~~~v~avR~a~--g-----~~~~l~vDaN-~~~~~~~A~~-~~~~L~~~~ 226 (392)
T 3ddm_A 156 PENPEDVVARKAAEGYRAFKLKVGFDDARDVRNALHVRELL--G-----AATPLMADAN-QGWDLPRARQ-MAQRLGPAQ 226 (392)
T ss_dssp SSSHHHHHHHHHHHTCCCEEEECSSCHHHHHHHHHHHHHHH--C-----SSSCEEEECT-TCCCHHHHHH-HHHHHGGGC
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCCHHHHHHHHHHHHHhc--C-----CCceEEEeCC-CCCCHHHHHH-HHHHHHHhC
Confidence 477788888899999998865433221 222233455542 2 3334444543 2334443322 334556555
Q ss_pred CCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe-eEEEecCCCHHHHHHHHHhCCCCCceecc
Q 025159 117 LEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT-KAIGVSNFSCKKLGDILATAKIPPAANQV 195 (257)
Q Consensus 117 ~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~p~~~q~ 195 (257)
++ ++..|... ...++.+.++++.-.| -..|=+-++++.+.++++...++ ++|.
T Consensus 227 i~-----~iEeP~~~-------------------~d~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d--~v~~ 280 (392)
T 3ddm_A 227 LD-----WLEEPLRA-------------------DRPAAEWAELAQAAPMPLAGGENIAGVAAFETALAARSLR--VMQP 280 (392)
T ss_dssp CS-----EEECCSCT-------------------TSCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCEE--EECC
T ss_pred CC-----EEECCCCc-------------------cchHHHHHHHHHhcCCCEEeCCCCCCHHHHHHHHHcCCCC--EEEe
Confidence 44 44555321 0115667777775444 34566778999999998876544 7776
Q ss_pred ccCCCC---CcHHHHHHHHHCCceEEEec
Q 025159 196 EMNPLW---QQNKLREFCKAKDIQLAAYA 221 (257)
Q Consensus 196 ~~~~~~---~~~~~~~~~~~~gi~v~~~~ 221 (257)
...-+. .-..+.+.|+++|+.++.+.
T Consensus 281 k~~~~GGit~~~~ia~~A~~~gi~~~~h~ 309 (392)
T 3ddm_A 281 DLAKWGGFSGCLPVARAVVAAGLRYCPHY 309 (392)
T ss_dssp CTTTTTHHHHHHHHHHHHHHTTCEECCEE
T ss_pred CcchhCCHHHHHHHHHHHHHcCCEEEecC
Confidence 655432 23679999999999997654
No 97
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=79.42 E-value=30 Score=29.87 Aligned_cols=152 Identities=12% Similarity=0.025 Sum_probs=92.4
Q ss_pred CChhHHHHHHHHHHHcCCceeeCCCCCCChHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHhhC
Q 025159 37 SGSETTKLAILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLENLQ 116 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~Lg 116 (257)
.+.++..+....+.+.|++.|..-... ..+..-+.++... +.. . ++-|..+.. ..++.+...+-+ +.|+.+|
T Consensus 146 ~~~e~~~~~a~~~~~~Gf~~iKik~g~-~~~~~~e~v~avr-~a~--g--d~~l~vD~n-~~~~~~~a~~~~-~~l~~~~ 217 (384)
T 2pgw_A 146 ETAEELARDAAVGHAQGERVFYLKVGR-GEKLDLEITAAVR-GEI--G--DARLRLDAN-EGWSVHDAINMC-RKLEKYD 217 (384)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEECCS-CHHHHHHHHHHHH-TTS--T--TCEEEEECT-TCCCHHHHHHHH-HHHGGGC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECcCC-CHHHHHHHHHHHH-HHc--C--CcEEEEecC-CCCCHHHHHHHH-HHHHhcC
Confidence 366777888888899999998853221 3222333344331 111 2 555666653 344555554433 3677777
Q ss_pred CCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEEe-cCCCHHHHHHHHHhCCCCCceecc
Q 025159 117 LEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGV-SNFSCKKLGDILATAKIPPAANQV 195 (257)
Q Consensus 117 ~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~p~~~q~ 195 (257)
+++ +..|.. ..-|+.+.++++.-.|--++. +-++++.++++++....+ ++|+
T Consensus 218 i~~-----iEqP~~--------------------~~~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d--~v~i 270 (384)
T 2pgw_A 218 IEF-----IEQPTV--------------------SWSIPAMAHVREKVGIPIVADQAAFTLYDVYEICRQRAAD--MICI 270 (384)
T ss_dssp CSE-----EECCSC--------------------TTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCS--EEEE
T ss_pred CCE-----EeCCCC--------------------hhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCC--EEEE
Confidence 664 445521 123566777777655544443 445899999999876655 6666
Q ss_pred ccCCCCC---cHHHHHHHHHCCceEEEecCC
Q 025159 196 EMNPLWQ---QNKLREFCKAKDIQLAAYAPL 223 (257)
Q Consensus 196 ~~~~~~~---~~~~~~~~~~~gi~v~~~~pl 223 (257)
..+-+.- -..+.+.|+++|+.++..+.+
T Consensus 271 k~~~~GGit~~~~i~~~A~~~g~~~~~~~~~ 301 (384)
T 2pgw_A 271 GPREIGGIQPMMKAAAVAEAAGLKICIHSSF 301 (384)
T ss_dssp CHHHHTSHHHHHHHHHHHHHTTCCEEECCCS
T ss_pred cchhhCCHHHHHHHHHHHHHCCCeEeeccCc
Confidence 5543322 257899999999999987644
No 98
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=77.93 E-value=25 Score=30.94 Aligned_cols=151 Identities=15% Similarity=0.104 Sum_probs=90.4
Q ss_pred CChhHHHHHHHHHHHcCCceeeCCCC-------CCC--------------------------h--HHHHHHHHHHHhCCC
Q 025159 37 SGSETTKLAILEAMKLGYRHFDTATL-------YQT--------------------------E--QPLGDAIAEALSTGI 81 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~Gi~~~DtA~~-------Yg~--------------------------e--~~lg~~l~~~~~~~~ 81 (257)
.+.++..+.++.+++.|++.|-.--. ||. + ...=+++|+.+ +
T Consensus 142 ~~~e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~v~avR~a~--G- 218 (418)
T 3r4e_A 142 SDIAETVEAVGHYIDMGYKAIRAQTGVPGIKDAYGVGRGKLYYEPADASLPSVTGWDTRKALNYVPKLFEELRKTY--G- 218 (418)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEEECCTTC------------------CCCCEEEECHHHHHHHHHHHHHHHHHHH--C-
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHc--C-
Confidence 46788888899999999998753211 220 0 11123445442 2
Q ss_pred CCCCCcEEEEeccCCCCCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHH
Q 025159 82 IKSRDELFIASKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQ 161 (257)
Q Consensus 82 ~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 161 (257)
+++-|..... ..++.+...+ +-+.|+.++++ +++.|... +-++.+.+++
T Consensus 219 ----~d~~l~vDaN-~~~~~~~A~~-~~~~L~~~~i~-----~iEqP~~~--------------------~d~~~~~~l~ 267 (418)
T 3r4e_A 219 ----FDHHLLHDGH-HRYTPQEAAN-LGKMLEPYQLF-----WLEDCTPA--------------------ENQEAFRLVR 267 (418)
T ss_dssp ----SSSEEEEECT-TCSCHHHHHH-HHHHHGGGCCS-----EEESCSCC--------------------SSGGGGHHHH
T ss_pred ----CCCeEEEeCC-CCCCHHHHHH-HHHHHHhhCCC-----EEECCCCc--------------------cCHHHHHHHH
Confidence 4555555653 2344444333 33455666544 45666321 1134566676
Q ss_pred HcCCee-EEEecCCCHHHHHHHHHhCCCCCceeccccCCCCC---cHHHHHHHHHCCceEEEecCC
Q 025159 162 NLGYTK-AIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQ---QNKLREFCKAKDIQLAAYAPL 223 (257)
Q Consensus 162 ~~G~ir-~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~---~~~~~~~~~~~gi~v~~~~pl 223 (257)
+.-.|- ..|=+-++++.+.++++...++ ++|...+-+.- -..+.+.|+++|+.++.++++
T Consensus 268 ~~~~iPIa~dE~~~~~~~~~~~l~~~a~d--~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 331 (418)
T 3r4e_A 268 QHTVTPLAVGEIFNTIWDAKDLIQNQLID--YIRATVVGAGGLTHLRRIADLASLYQVRTGCHGPT 331 (418)
T ss_dssp HHCCSCEEECTTCCSGGGTHHHHHTTCCS--EECCCTTTTTHHHHHHHHHHHHHHTTCEEEECCCT
T ss_pred hcCCCCEEEcCCcCCHHHHHHHHHcCCCC--eEecCccccCCHHHHHHHHHHHHHcCCEEeecCCC
Confidence 665553 3455667888999998876655 77777655432 367899999999999988875
No 99
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=77.51 E-value=25 Score=30.43 Aligned_cols=148 Identities=16% Similarity=0.115 Sum_probs=88.2
Q ss_pred ChhHHHHHHHHHHHcCCceeeCCCCCC-ChHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHhhC
Q 025159 38 GSETTKLAILEAMKLGYRHFDTATLYQ-TEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLENLQ 116 (257)
Q Consensus 38 ~~~~~~~~l~~Al~~Gi~~~DtA~~Yg-~e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~Lg 116 (257)
+.++..+.+..+.+.|++.|=.--.-. ..+.+ +++++.+ .++.|..-.. ..++++.. + .++.|.
T Consensus 161 ~~~~~~~~a~~~~~~G~~~~KiKvg~~~d~~~v-~avr~a~--------~~~~l~vDaN-~~~~~~~a-~----~~~~l~ 225 (386)
T 1wue_A 161 DLPQLLKQVQLAVEKGYQRVKLKIRPGYDVEPV-ALIRQHF--------PNLPLMVDAN-SAYTLADL-P----QLQRLD 225 (386)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECBTTBSHHHH-HHHHHHC--------TTSCEEEECT-TCCCGGGH-H----HHHGGG
T ss_pred CHHHHHHHHHHHHHhhhheEEEeeCcHHHHHHH-HHHHHhC--------CCCeEEEeCC-CCCCHHHH-H----HHHHHH
Confidence 567777777888899999764211111 22233 5566652 2333443332 23344544 2 234443
Q ss_pred CCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe-eEEEecCCCHHHHHHHHHhCCCCCceecc
Q 025159 117 LEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT-KAIGVSNFSCKKLGDILATAKIPPAANQV 195 (257)
Q Consensus 117 ~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~p~~~q~ 195 (257)
..++.++..|... +-++.+.+|.++-.| -..|=|-++...+.++++...++ ++|+
T Consensus 226 --~~~i~~iEqP~~~--------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d--~i~i 281 (386)
T 1wue_A 226 --HYQLAMIEQPFAA--------------------DDFLDHAQLQRELKTRICLDENIRSLKDCQVALALGSCR--SINL 281 (386)
T ss_dssp --GSCCSCEECCSCT--------------------TCSHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHTCCS--EEEE
T ss_pred --hCCCeEEeCCCCc--------------------ccHHHHHHHHHhcCCCEEeCCccCCHHHHHHHHHcCCCC--EEEE
Confidence 2467778887532 124556667665444 34566778899999998876655 6666
Q ss_pred ccCCCCC---cHHHHHHHHHCCceEEEecCCC
Q 025159 196 EMNPLWQ---QNKLREFCKAKDIQLAAYAPLG 224 (257)
Q Consensus 196 ~~~~~~~---~~~~~~~~~~~gi~v~~~~pl~ 224 (257)
..+-+.- -..+.+.|+++|+.++..+.+.
T Consensus 282 k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~e 313 (386)
T 1wue_A 282 KIPRVGGIHEALKIAAFCQENDLLVWLGGMFE 313 (386)
T ss_dssp CHHHHTSHHHHHHHHHHHHHTTCEEEECCCCC
T ss_pred chhhhCCHHHHHHHHHHHHHCCCeEEECCCcc
Confidence 6543322 2678999999999998876654
No 100
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=77.48 E-value=9.8 Score=29.82 Aligned_cols=66 Identities=9% Similarity=0.053 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHc-CCeeEEEecCCC--HHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEe
Q 025159 150 FKSVWEAMEECQNL-GYTKAIGVSNFS--CKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAY 220 (257)
Q Consensus 150 ~~~~~~~l~~l~~~-G~ir~iGvs~~~--~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~ 220 (257)
..+++++|..+++. ++|..||..|.. ...+..++ +++ +.+..|+.-..-...+..+++.|+.++.-
T Consensus 80 ~~Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll---~~~--i~~~~~~~~~e~~~~i~~l~~~G~~vvVG 148 (196)
T 2q5c_A 80 RFDTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAML---GVK--IKEFLFSSEDEITTLISKVKTENIKIVVS 148 (196)
T ss_dssp HHHHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHH---TCE--EEEEEECSGGGHHHHHHHHHHTTCCEEEE
T ss_pred HhHHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHh---CCc--eEEEEeCCHHHHHHHHHHHHHCCCeEEEC
Confidence 67899999999985 567777777764 34444444 344 66666665444478999999999999874
No 101
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=77.27 E-value=33 Score=29.11 Aligned_cols=152 Identities=9% Similarity=0.010 Sum_probs=90.6
Q ss_pred ChhHHHHHHHHHHHcCCceeeCCCCCCChH--HHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHhh
Q 025159 38 GSETTKLAILEAMKLGYRHFDTATLYQTEQ--PLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLENL 115 (257)
Q Consensus 38 ~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~--~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~L 115 (257)
+.++..+..+.+.+.|++.|-.-.....+. .+=+++|+. + + ++-|.... +..++.+...+-+ +.|+.+
T Consensus 139 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~d~~~v~avr~~---g---~--~~~l~vDa-n~~~~~~~a~~~~-~~l~~~ 208 (345)
T 2zad_A 139 TVENRVKEAKKIFEEGFRVIKIKVGENLKEDIEAVEEIAKV---T---R--GAKYIVDA-NMGYTQKEAVEFA-RAVYQK 208 (345)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHH---S---T--TCEEEEEC-TTCSCHHHHHHHH-HHHHHT
T ss_pred CHHHHHHHHHHHHHcCcCEEEEeecCCHHHHHHHHHHHHhh---C---C--CCeEEEEC-CCCCCHHHHHHHH-HHHHhc
Confidence 567777888888999999886432211111 112444544 3 2 33333333 2334555555544 337777
Q ss_pred CCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCee-EEEecCCCHHHHHHHHHhCCCCCceec
Q 025159 116 QLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTK-AIGVSNFSCKKLGDILATAKIPPAANQ 194 (257)
Q Consensus 116 g~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~p~~~q 194 (257)
+++ ..++..|... +-++.+.++++.-.|- ..|=+-++++.+.++++....+ ++|
T Consensus 209 ~i~---~~~iE~P~~~--------------------~~~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~~~d--~v~ 263 (345)
T 2zad_A 209 GID---IAVYEQPVRR--------------------EDIEGLKFVRFHSPFPVAADESARTKFDVMRLVKEEAVD--YVN 263 (345)
T ss_dssp TCC---CSEEECCSCT--------------------TCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHHTCCS--EEE
T ss_pred CCC---eeeeeCCCCc--------------------ccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHhCCCC--EEE
Confidence 655 1245666321 2256666777655553 3344567899999999876665 666
Q ss_pred cccCC--CCCcHHHHHHHHHCCceEEEecCCC
Q 025159 195 VEMNP--LWQQNKLREFCKAKDIQLAAYAPLG 224 (257)
Q Consensus 195 ~~~~~--~~~~~~~~~~~~~~gi~v~~~~pl~ 224 (257)
+..+- +.....+.+.|+++|+.++..+.+.
T Consensus 264 ik~~~GGit~~~~i~~~A~~~g~~~~~~~~~e 295 (345)
T 2zad_A 264 IKLMKSGISDALAIVEIAESSGLKLMIGCMGE 295 (345)
T ss_dssp ECHHHHHHHHHHHHHHHHHTTTCEEEECCSSC
T ss_pred EecccccHHHHHHHHHHHHHcCCeEEEecCcc
Confidence 64432 1123578999999999999887654
No 102
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=77.18 E-value=25 Score=29.58 Aligned_cols=93 Identities=11% Similarity=0.148 Sum_probs=59.7
Q ss_pred HHHHHHHHHHc-CCeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCCCCC
Q 025159 153 VWEAMEECQNL-GYTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTIWG 231 (257)
Q Consensus 153 ~~~~l~~l~~~-G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~l~~ 231 (257)
+...++.+++. +. -|.|-+++++.++++++.. .+.+| ..+......++++.++++|.+++.+.-- |.-
T Consensus 103 vvpvI~~l~~~~~v--piSIDT~~~~V~~aAl~aG--a~iIN--dvsg~~~d~~m~~~aa~~g~~vVlmh~~---G~p-- 171 (297)
T 1tx2_A 103 VVPMIQAVSKEVKL--PISIDTYKAEVAKQAIEAG--AHIIN--DIWGAKAEPKIAEVAAHYDVPIILMHNR---DNM-- 171 (297)
T ss_dssp HHHHHHHHHHHSCS--CEEEECSCHHHHHHHHHHT--CCEEE--ETTTTSSCTHHHHHHHHHTCCEEEECCC---SCC--
T ss_pred HHHHHHHHHhcCCc--eEEEeCCCHHHHHHHHHcC--CCEEE--ECCCCCCCHHHHHHHHHhCCcEEEEeCC---CCC--
Confidence 44444566554 43 3889999999999999973 23344 4444444568999999999999998652 321
Q ss_pred CCC-c-----cChHHHHHHHHHhCCCccccc
Q 025159 232 SNR-V-----MECEVLKEIAEAKGKTVAQVL 256 (257)
Q Consensus 232 ~~~-~-----~~~~~~~~ia~~~~~s~~qva 256 (257)
.+. . ..-....+.|.+.|+.+.++.
T Consensus 172 ~y~d~v~ev~~~l~~~i~~a~~~GI~~~~Ii 202 (297)
T 1tx2_A 172 NYRNLMADMIADLYDSIKIAKDAGVRDENII 202 (297)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred CcchHHHHHHHHHHHHHHHHHHcCCChhcEE
Confidence 110 0 011344556778898877664
No 103
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=77.00 E-value=38 Score=29.71 Aligned_cols=149 Identities=15% Similarity=0.127 Sum_probs=91.3
Q ss_pred CChhHHHHHHHHHHHcCCceeeCCCC--CC-------ChH------HHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCCh
Q 025159 37 SGSETTKLAILEAMKLGYRHFDTATL--YQ-------TEQ------PLGDAIAEALSTGIIKSRDELFIASKLWCSDAHR 101 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~Gi~~~DtA~~--Yg-------~e~------~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~ 101 (257)
.+.++..+..+.+++.|++.|-.-.. |. +.. ..=+++|+.+ -+++-|...... .++.
T Consensus 143 ~~~e~~~~~a~~~~~~G~~~iKlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~-------G~d~~l~vDaN~-~~~~ 214 (412)
T 4e4u_A 143 DDPDLAAECAAENVKLGFTAVKFDPAGPYTAYSGHQLSLEVLDRCELFCRRVREAV-------GSKADLLFGTHG-QMVP 214 (412)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHH-------TTSSEEEECCCS-CBCH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCccccccccchhhHHHHHHHHHHHHHHh-------CCCCeEEEECCC-CCCH
Confidence 46788888888999999998876432 11 111 1223344431 245556666532 3344
Q ss_pred hhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCee-EEEecCCCHHHHH
Q 025159 102 ELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTK-AIGVSNFSCKKLG 180 (257)
Q Consensus 102 ~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~ 180 (257)
+...+ +-+.|+.+++ .++..|... +-++.+.++++.-.|- ..|=+-++++.+.
T Consensus 215 ~~A~~-~~~~L~~~~i-----~~iEeP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~ 268 (412)
T 4e4u_A 215 SSAIR-LAKRLEKYDP-----LWFEEPVPP--------------------GQEEAIAQVAKHTSIPIATGERLTTKYEFH 268 (412)
T ss_dssp HHHHH-HHHHHGGGCC-----SEEECCSCS--------------------SCHHHHHHHHHTCSSCEEECTTCCHHHHHH
T ss_pred HHHHH-HHHHhhhcCC-----cEEECCCCh--------------------hhHHHHHHHHhhCCCCEEecCccCCHHHHH
Confidence 43332 3345666654 455666321 1246677888765553 4455667888999
Q ss_pred HHHHhCCCCCceeccccCCCCC---cHHHHHHHHHCCceEEEec
Q 025159 181 DILATAKIPPAANQVEMNPLWQ---QNKLREFCKAKDIQLAAYA 221 (257)
Q Consensus 181 ~~~~~~~~~p~~~q~~~~~~~~---~~~~~~~~~~~gi~v~~~~ 221 (257)
++++...++ ++|....-+.- -..+.+.|+++|+.+..+.
T Consensus 269 ~~i~~~a~d--~v~~d~~~~GGit~~~kia~~A~~~gi~v~~h~ 310 (412)
T 4e4u_A 269 KLLQAGGAS--ILQLNVARVGGLLEAKKIATLAEVHYAQIAPHL 310 (412)
T ss_dssp HHHHTTCCS--EECCCTTTTTSHHHHHHHHHHHHHTTCEECCCC
T ss_pred HHHHcCCCC--EEEeCccccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 998876655 77777665432 3678999999999997764
No 104
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=76.78 E-value=37 Score=29.55 Aligned_cols=151 Identities=13% Similarity=0.166 Sum_probs=91.3
Q ss_pred CChhHHHHHHHHHHHcCCceeeCCCC-CC-------------------Ch------HHHHHHHHHHHhCCCCCCCCcEEE
Q 025159 37 SGSETTKLAILEAMKLGYRHFDTATL-YQ-------------------TE------QPLGDAIAEALSTGIIKSRDELFI 90 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~Gi~~~DtA~~-Yg-------------------~e------~~lg~~l~~~~~~~~~~~R~~l~i 90 (257)
.+.++..+.++.+++.|++.|-.--. ++ .+ ...=+++|+.+ + +++-|
T Consensus 132 ~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~avR~a~--G-----~d~~l 204 (401)
T 3sbf_A 132 DTMEGIYDLVEGFLEKGYKHIRCQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFKSLREKY--G-----NQFHI 204 (401)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHH--T-----TSSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchHHHHHHHHHHHHHHHHc--C-----CCCEE
Confidence 36788888899999999998763210 11 00 11123455442 2 45556
Q ss_pred EeccCCCCCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCee-EE
Q 025159 91 ASKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTK-AI 169 (257)
Q Consensus 91 ~tK~~~~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~i 169 (257)
...... .++.+...+ +-+.|+.+++++ ++.|... +-++.+.++++.-.|- ..
T Consensus 205 ~vDan~-~~~~~~A~~-~~~~L~~~~i~~-----iEqP~~~--------------------~~~~~~~~l~~~~~iPIa~ 257 (401)
T 3sbf_A 205 LHDVHE-RLFPNQAIQ-FAKEVEQYKPYF-----IEDILPP--------------------NQTEWLDNIRSQSSVSLGL 257 (401)
T ss_dssp EEECTT-CSCHHHHHH-HHHHHGGGCCSC-----EECSSCT--------------------TCGGGHHHHHTTCCCCEEE
T ss_pred EEECCC-CCCHHHHHH-HHHHHHhcCCCE-----EECCCCh--------------------hHHHHHHHHHhhCCCCEEe
Confidence 666533 334443332 334566666544 4555321 1235566777765553 44
Q ss_pred EecCCCHHHHHHHHHhCCCCCceeccccCCCCC---cHHHHHHHHHCCceEEEecCC
Q 025159 170 GVSNFSCKKLGDILATAKIPPAANQVEMNPLWQ---QNKLREFCKAKDIQLAAYAPL 223 (257)
Q Consensus 170 Gvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~---~~~~~~~~~~~gi~v~~~~pl 223 (257)
|=+-++++.+.++++...++ ++|...+-+.- -..+.+.|+++|+.++.+++.
T Consensus 258 dE~~~~~~~~~~~i~~~~~d--~v~~k~~~~GGit~~~kia~~A~~~gi~~~~h~~~ 312 (401)
T 3sbf_A 258 GELFNNPEEWKSLIANRRID--FIRCHVSQIGGITPALKLGHLCQNFGVRIAWHCAP 312 (401)
T ss_dssp CTTCCSHHHHHHHHHTTCCS--EECCCGGGGTSHHHHHHHHHHHHHHTCEECCCCCT
T ss_pred CCccCCHHHHHHHHhcCCCC--EEecCccccCCHHHHHHHHHHHHHcCCEEEecCCc
Confidence 55678899999999876655 77776654322 267899999999999887763
No 105
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=75.50 E-value=26 Score=30.66 Aligned_cols=146 Identities=10% Similarity=0.030 Sum_probs=89.5
Q ss_pred hhHHHHHHHHHHHc-CCceeeCCCCCC--ChHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHhh
Q 025159 39 SETTKLAILEAMKL-GYRHFDTATLYQ--TEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLENL 115 (257)
Q Consensus 39 ~~~~~~~l~~Al~~-Gi~~~DtA~~Yg--~e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~L 115 (257)
.++..+.++.+++. |++.|=.--... .+...=+++|+. - +++-|...... .++++...+ +-+.|+.+
T Consensus 169 ~e~~~~~a~~~~~~~G~~~~K~KvG~~~~~d~~~v~avR~~-------~-~~~~l~vDaN~-~w~~~~A~~-~~~~l~~~ 238 (398)
T 4dye_A 169 PKAMAEHAVRVVEEGGFDAVKLKGTTDCAGDVAILRAVREA-------L-PGVNLRVDPNA-AWSVPDSVR-AGIALEEL 238 (398)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEECCSCHHHHHHHHHHHHHH-------C-TTSEEEEECTT-CSCHHHHHH-HHHHHGGG
T ss_pred HHHHHHHHHHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHh-------C-CCCeEEeeCCC-CCCHHHHHH-HHHHHhhc
Confidence 47777888888888 999875433221 122233455665 3 44455555432 334433322 22345554
Q ss_pred CCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe-eEEEecCCCHHHHHHHHHhCCCCCceec
Q 025159 116 QLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT-KAIGVSNFSCKKLGDILATAKIPPAANQ 194 (257)
Q Consensus 116 g~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~p~~~q 194 (257)
+ +.++..|. . -++.+.++++.-.| -+.|=+-++...+.++++...++ ++|
T Consensus 239 ~-----i~~iEqP~-------------------~---d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d--~v~ 289 (398)
T 4dye_A 239 D-----LEYLEDPC-------------------V---GIEGMAQVKAKVRIPLCTNMCVVRFEDFAPAMRLNAVD--VIH 289 (398)
T ss_dssp C-----CSEEECCS-------------------S---HHHHHHHHHHHCCSCEEESSSCCSGGGHHHHHHTTCCS--EEE
T ss_pred C-----CCEEcCCC-------------------C---CHHHHHHHHhhCCCCEEeCCcCCCHHHHHHHHHhCCCC--EEE
Confidence 4 45566662 1 36777777776444 45566778899999998876655 777
Q ss_pred cccCCCCC---cHHHHHHHHHCCceEEEecCC
Q 025159 195 VEMNPLWQ---QNKLREFCKAKDIQLAAYAPL 223 (257)
Q Consensus 195 ~~~~~~~~---~~~~~~~~~~~gi~v~~~~pl 223 (257)
....-+.- -..+.+.|+++|+.++.++..
T Consensus 290 ~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 321 (398)
T 4dye_A 290 GDVYKWGGIAATKALAAHCETFGLGMNLHSGG 321 (398)
T ss_dssp ECHHHHTSHHHHHHHHHHHHHHTCEEEECCSC
T ss_pred eCccccCCHHHHHHHHHHHHHcCCeEEEcCCc
Confidence 66544322 367899999999999988743
No 106
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=75.12 E-value=30 Score=29.87 Aligned_cols=82 Identities=12% Similarity=0.075 Sum_probs=48.0
Q ss_pred EEEeccCCCC-C-----ChhhH--HHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHH
Q 025159 89 FIASKLWCSD-A-----HRELV--VPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEEC 160 (257)
Q Consensus 89 ~i~tK~~~~~-~-----~~~~i--~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 160 (257)
.|..|+...+ + ....+ -..+-+.|+..|+|||++ |....... + ... ++.+.++
T Consensus 229 ~v~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v---~~~~~~~~-----~-------~~~----~~~~~~v 289 (364)
T 1vyr_A 229 RIGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHM---SETDLAGG-----K-------PYS----EAFRQKV 289 (364)
T ss_dssp GEEEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEE---ECCBTTBC-----C-------CCC----HHHHHHH
T ss_pred cEEEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEE---ecCcccCC-----C-------ccc----HHHHHHH
Confidence 5677775542 1 11122 233556677888766554 54321100 0 011 3455666
Q ss_pred HHcCCeeEEEecCCCHHHHHHHHHhCCCC
Q 025159 161 QNLGYTKAIGVSNFSCKKLGDILATAKIP 189 (257)
Q Consensus 161 ~~~G~ir~iGvs~~~~~~l~~~~~~~~~~ 189 (257)
++.=.+--|++..++++..+++++....+
T Consensus 290 ~~~~~iPvi~~Ggit~~~a~~~l~~g~aD 318 (364)
T 1vyr_A 290 RERFHGVIIGAGAYTAEKAEDLIGKGLID 318 (364)
T ss_dssp HHHCCSEEEEESSCCHHHHHHHHHTTSCS
T ss_pred HHHCCCCEEEECCcCHHHHHHHHHCCCcc
Confidence 66656777888888999999999976655
No 107
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=74.63 E-value=13 Score=29.97 Aligned_cols=68 Identities=10% Similarity=-0.079 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHc-CCeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEe
Q 025159 150 FKSVWEAMEECQNL-GYTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAY 220 (257)
Q Consensus 150 ~~~~~~~l~~l~~~-G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~ 220 (257)
..+++++|..+++. ++|..||..|.... +..+.+..+++ +.+..|+.-..-...+..+++.|+.++.-
T Consensus 92 ~~Dil~aL~~a~~~~~kIavVg~~~~~~~-~~~i~~ll~~~--i~~~~~~~~ee~~~~i~~l~~~G~~vVVG 160 (225)
T 2pju_A 92 GYDVLQFLAKAGKLTSSIGVVTYQETIPA-LVAFQKTFNLR--LDQRSYITEEDARGQINELKANGTEAVVG 160 (225)
T ss_dssp HHHHHHHHHHTTCTTSCEEEEEESSCCHH-HHHHHHHHTCC--EEEEEESSHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHhhCCcEEEEeCchhhhH-HHHHHHHhCCc--eEEEEeCCHHHHHHHHHHHHHCCCCEEEC
Confidence 66889999999885 66888888887643 44454544555 55556554333467899999999999874
No 108
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=74.13 E-value=34 Score=30.09 Aligned_cols=150 Identities=21% Similarity=0.220 Sum_probs=90.3
Q ss_pred CChhHHHHHHHHHHHcCCceeeCCCC-CC-------------------Ch------HHHHHHHHHHHhCCCCCCCCcEEE
Q 025159 37 SGSETTKLAILEAMKLGYRHFDTATL-YQ-------------------TE------QPLGDAIAEALSTGIIKSRDELFI 90 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~Gi~~~DtA~~-Yg-------------------~e------~~lg~~l~~~~~~~~~~~R~~l~i 90 (257)
.+.++..+.++.+++.|++.|-.--. ++ .+ ...=+++|+.+ | +++-|
T Consensus 153 ~~~e~~~~~a~~~~~~G~~~iKlKvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~e~v~avR~av--G-----~d~~L 225 (422)
T 3tji_A 153 ETLEALFASVDALIAQGYRHIRCQLGFYGGTPSALHAPDNPTPGAWFDQQEYMSNTVEMFHALREKY--G-----WKLHI 225 (422)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEEESCCCBCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHH--C-----SSSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchhHHHHHHHHHHHHHHHc--C-----CCCEE
Confidence 46788888899999999998753110 11 01 11123445442 2 45556
Q ss_pred EeccCCCCCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe-eEE
Q 025159 91 ASKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT-KAI 169 (257)
Q Consensus 91 ~tK~~~~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~i 169 (257)
...... .++++...+ +-+.|+.+++ .++..|.. .+-++.+.++++.-.| -..
T Consensus 226 ~vDaN~-~~~~~~A~~-~~~~Le~~~i-----~~iEqP~~--------------------~~d~~~~~~l~~~~~iPIa~ 278 (422)
T 3tji_A 226 LHDVHE-RLFPQQAVQ-LAKQLEPFQP-----YFIEDILP--------------------PQQSAWLEQVRQQSCVPLAL 278 (422)
T ss_dssp EEECTT-CSCHHHHHH-HHHHHGGGCC-----SEEECCSC--------------------GGGGGGHHHHHHHCCCCEEE
T ss_pred EEECCC-CCCHHHHHH-HHHHHHhhCC-----CeEECCCC--------------------hhhHHHHHHHHhhCCCCEEE
Confidence 666532 344443332 2235565554 45566632 1224556677775555 345
Q ss_pred EecCCCHHHHHHHHHhCCCCCceeccccCCCCC---cHHHHHHHHHCCceEEEecC
Q 025159 170 GVSNFSCKKLGDILATAKIPPAANQVEMNPLWQ---QNKLREFCKAKDIQLAAYAP 222 (257)
Q Consensus 170 Gvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~---~~~~~~~~~~~gi~v~~~~p 222 (257)
|=+-++++.+.++++...++ ++|....-+.- -..+.+.|+++|+.++.+++
T Consensus 279 dE~~~~~~~~~~ll~~ga~d--~v~~k~~~~GGit~~~kia~lA~a~gv~v~~h~~ 332 (422)
T 3tji_A 279 GELFNNPAEWHDLIVNRRID--FIRCHVSQIGGITPALKLAHLCQAFGVRLAWHGP 332 (422)
T ss_dssp CTTCCSGGGTHHHHHTTCCS--EECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCC
T ss_pred eCCcCCHHHHHHHHhcCCCC--EEecCccccCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 56677888999998876655 77776654322 36789999999999988776
No 109
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=73.99 E-value=42 Score=28.81 Aligned_cols=145 Identities=10% Similarity=0.052 Sum_probs=85.5
Q ss_pred hHHHHHHHHHHHcCCceeeCCCCCCChHH--HHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHhhCC
Q 025159 40 ETTKLAILEAMKLGYRHFDTATLYQTEQP--LGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLENLQL 117 (257)
Q Consensus 40 ~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~~--lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~Lg~ 117 (257)
++..+.+..+.+.|++.|=.-...+.+.- .=+++|+.+ + +++-|..-... .++++...+-+ +.|+.
T Consensus 146 ~~~~~~~~~~~~~Gf~~~K~k~g~~~~~di~~v~avr~~~--g-----~~~~l~vDaN~-~~~~~~A~~~~-~~l~~--- 213 (378)
T 4hpn_A 146 SDNASEMAERRAEGFHACKIKIGFGVEEDLRVIAAVREAI--G-----PDMRLMIDANH-GYTVTEAITLG-DRAAG--- 213 (378)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHH--T-----TTSEEEEECTT-CCCHHHHHHHH-HHHGG---
T ss_pred HHHHHHHHHHHHhccceecccccCChHHHHHHHHHHHHhc--C-----CcEEEEEecCc-ccCHHHHHHHH-hhhhh---
Confidence 34455566677899997754433332222 223455542 2 33344433322 23444333222 22333
Q ss_pred CcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe-eEEEecCCCHHHHHHHHHhCCCCCceeccc
Q 025159 118 EYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT-KAIGVSNFSCKKLGDILATAKIPPAANQVE 196 (257)
Q Consensus 118 d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~p~~~q~~ 196 (257)
.++.++..|... +-++.+.+|++.-.+ -+.|=|-++...+.++++...++ ++|..
T Consensus 214 --~~i~~iEeP~~~--------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d--~i~~d 269 (378)
T 4hpn_A 214 --FGIDWFEEPVVP--------------------EQLDAYARVRAGQPIPVAGGETWHGRYGMWQALSAGAVD--ILQPD 269 (378)
T ss_dssp --GCCSCEECCSCT--------------------TCHHHHHHHHHHSSSCEEECTTCCHHHHHHHHHHTTCCS--EECCB
T ss_pred --cccchhhcCCCc--------------------cchhhhHHHHhhCCceeeCCcCccchHhHHHHHHcCCCC--EEeeC
Confidence 466677887432 124667777776555 45678888999999998876665 77777
Q ss_pred cCCCCC---cHHHHHHHHHCCceEEEe
Q 025159 197 MNPLWQ---QNKLREFCKAKDIQLAAY 220 (257)
Q Consensus 197 ~~~~~~---~~~~~~~~~~~gi~v~~~ 220 (257)
..-+.- -..+.+.|+++|+.++.+
T Consensus 270 ~~~~GGit~~~~ia~~A~~~gi~v~~h 296 (378)
T 4hpn_A 270 LCGCGGFSEIQKIATLATLHGVRIVPH 296 (378)
T ss_dssp TTTTTHHHHHHHHHHHHHHHTCEECCB
T ss_pred CeeCCChhHHHHHHHHHHHcCCeEEeC
Confidence 654321 367899999999998654
No 110
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=73.87 E-value=28 Score=30.25 Aligned_cols=83 Identities=13% Similarity=-0.022 Sum_probs=47.0
Q ss_pred EEEeccCCCC-------CChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHH
Q 025159 89 FIASKLWCSD-------AHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQ 161 (257)
Q Consensus 89 ~i~tK~~~~~-------~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 161 (257)
.|..|+...+ .....--..+-+.|+..|+|||++ |....... + .. ..|+.+.+++
T Consensus 234 ~v~vrls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v---~~~~~~~~-----~-~~---------~~~~~~~~ik 295 (377)
T 2r14_A 234 RVGIRLTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHF---NEPDWIGG-----D-IT---------YPEGFREQMR 295 (377)
T ss_dssp GEEEEECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEE---ECCC------------C---------CCTTHHHHHH
T ss_pred cEEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEE---eCCcccCC-----C-Cc---------chHHHHHHHH
Confidence 5777774431 111222344567778889766654 54321110 0 00 0134445566
Q ss_pred HcCCeeEEEecCCCHHHHHHHHHhCCCC
Q 025159 162 NLGYTKAIGVSNFSCKKLGDILATAKIP 189 (257)
Q Consensus 162 ~~G~ir~iGvs~~~~~~l~~~~~~~~~~ 189 (257)
+.=.+--|++..++++..+++++....+
T Consensus 296 ~~~~iPvi~~Ggi~~~~a~~~l~~g~aD 323 (377)
T 2r14_A 296 QRFKGGLIYCGNYDAGRAQARLDDNTAD 323 (377)
T ss_dssp HHCCSEEEEESSCCHHHHHHHHHTTSCS
T ss_pred HHCCCCEEEECCCCHHHHHHHHHCCCce
Confidence 6556677888899999999999976655
No 111
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=73.76 E-value=2.5 Score=28.36 Aligned_cols=58 Identities=10% Similarity=0.174 Sum_probs=43.2
Q ss_pred HHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEec
Q 025159 157 MEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYA 221 (257)
Q Consensus 157 l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~ 221 (257)
++.+++.|++. .|. .+..+.++.......++--+.++ +....+..+|++++|+++-+.
T Consensus 3 ~~~~~kagk~~-~G~-----~~v~kai~~gkaklViiA~D~~~-~~~~~i~~lc~~~~Ip~~~v~ 60 (82)
T 3v7e_A 3 YDKVSQAKSII-IGT-----KQTVKALKRGSVKEVVVAKDADP-ILTSSVVSLAEDQGISVSMVE 60 (82)
T ss_dssp HHHHHHCSEEE-ESH-----HHHHHHHTTTCEEEEEEETTSCH-HHHHHHHHHHHHHTCCEEEES
T ss_pred HHHHHHcCCee-EcH-----HHHHHHHHcCCeeEEEEeCCCCH-HHHHHHHHHHHHcCCCEEEEC
Confidence 56788899874 565 67777778777766676666655 334678999999999998764
No 112
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=73.75 E-value=35 Score=29.22 Aligned_cols=151 Identities=14% Similarity=0.148 Sum_probs=91.6
Q ss_pred ChhHHHHHHHHHHHcCCceeeCCCCCCChHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHhh-C
Q 025159 38 GSETTKLAILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLENL-Q 116 (257)
Q Consensus 38 ~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~L-g 116 (257)
+.++..+..+.+.+.|++.|..--. ++-+..-+.++...+ . --+++-|..+... .++.+. ..+.++.| .
T Consensus 146 ~~~~~~~~a~~~~~~Gf~~iKik~g-~~~~~~~e~v~avr~-a---~g~~~~l~vDan~-~~~~~~----a~~~~~~l~~ 215 (371)
T 2ps2_A 146 EPEDMRARVAKYRAKGYKGQSVKIS-GEPVTDAKRITAALA-N---QQPDEFFIVDANG-KLSVET----ALRLLRLLPH 215 (371)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEEECC-SCHHHHHHHHHHHTT-T---CCTTCEEEEECTT-BCCHHH----HHHHHHHSCT
T ss_pred CHHHHHHHHHHHHHhChheEEeecC-CCHHHHHHHHHHHHH-h---cCCCCEEEEECCC-CcCHHH----HHHHHHHHHh
Confidence 6777888888889999999874321 132333344444311 1 1246666666542 233333 23344444 2
Q ss_pred CCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEE-ecCCCHHHHHHHHHhCCCCCceecc
Q 025159 117 LEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIG-VSNFSCKKLGDILATAKIPPAANQV 195 (257)
Q Consensus 117 ~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iG-vs~~~~~~l~~~~~~~~~~p~~~q~ 195 (257)
+ .++ ++..|.. -|+.+.++++.-.|--++ =+-++++.++++++....+ ++|+
T Consensus 216 -~-~~i-~iE~P~~----------------------~~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d--~v~i 268 (371)
T 2ps2_A 216 -G-LDF-ALEAPCA----------------------TWRECISLRRKTDIPIIYDELATNEMSIVKILADDAAE--GIDL 268 (371)
T ss_dssp -T-CCC-EEECCBS----------------------SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHHTCCS--EEEE
T ss_pred -h-cCC-cCcCCcC----------------------CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCC--EEEe
Confidence 2 355 6666521 357777887765554333 3456899999998877665 6666
Q ss_pred ccCCCCC---cHHHHHHHHHCCceEEEecCCCC
Q 025159 196 EMNPLWQ---QNKLREFCKAKDIQLAAYAPLGA 225 (257)
Q Consensus 196 ~~~~~~~---~~~~~~~~~~~gi~v~~~~pl~~ 225 (257)
..+-+.- -..+.+.|+++|+.++..+.+.+
T Consensus 269 k~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es 301 (371)
T 2ps2_A 269 KISKAGGLTRGRRQRDICLAAGYSVSVQETCGS 301 (371)
T ss_dssp EHHHHTSHHHHHHHHHHHHHHTCEEEEECSSCC
T ss_pred chhhcCCHHHHHHHHHHHHHcCCeEEecCCCcC
Confidence 5543322 25788999999999999877643
No 113
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=73.70 E-value=48 Score=29.35 Aligned_cols=149 Identities=16% Similarity=0.095 Sum_probs=90.0
Q ss_pred CChhHHHHHHHHHHHcCCceeeCCCCCCC--hHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHh
Q 025159 37 SGSETTKLAILEAMKLGYRHFDTATLYQT--EQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLEN 114 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~--e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~ 114 (257)
.++++..+..+.+++.|++.|-.-..... ....=+++|+.+ | +++-|...... .++++... +.+++
T Consensus 200 ~~~e~~~~~a~~~~~~Gf~~~KlKvG~~~~~d~~~v~avR~a~--G-----~~~~l~vDaN~-~~~~~~A~----~~~~~ 267 (441)
T 4a35_A 200 YSDDTLKQLCAQALKDGWTRFKVKVGADLQDDMRRCQIIRDMI--G-----PEKTLMMDANQ-RWDVPEAV----EWMSK 267 (441)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECSSCHHHHHHHHHHHHHHH--C-----TTSEEEEECTT-CCCHHHHH----HHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCCCHHHHHHHHHHHHHHh--C-----CCCeEEEECCC-CCCHHHHH----HHHHh
Confidence 47788888999999999998864322211 111223455542 2 34455555433 23333322 22333
Q ss_pred hCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHH----cCCeeEEEecCCCHHHHHHHHHhCCCCC
Q 025159 115 LQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQN----LGYTKAIGVSNFSCKKLGDILATAKIPP 190 (257)
Q Consensus 115 Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~----~G~ir~iGvs~~~~~~l~~~~~~~~~~p 190 (257)
|. ..+++++..|.... -+..+.++++ .+-=-+.|=+-++...+.++++...++
T Consensus 268 L~--~~~~~~iEeP~~~~--------------------d~~~~~~l~~~l~~~~iPIa~gE~~~~~~~~~~~l~~~a~d- 324 (441)
T 4a35_A 268 LA--KFKPLWIEEPTSPD--------------------DILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQAKALQ- 324 (441)
T ss_dssp HG--GGCCSEEECCSCTT--------------------CHHHHHHHHHHHGGGTCEEEECTTCCSHHHHHHHHHTTCCS-
T ss_pred hc--ccCccEEeCCCCcc--------------------cHHHHHHHHHhccCCCCCEEeCCccccHHHHHHHHHcCCCC-
Confidence 32 24677788874321 1344555554 344456678889999999998876665
Q ss_pred ceeccccCCCCC---cHHHHHHHHHCCceEEEec
Q 025159 191 AANQVEMNPLWQ---QNKLREFCKAKDIQLAAYA 221 (257)
Q Consensus 191 ~~~q~~~~~~~~---~~~~~~~~~~~gi~v~~~~ 221 (257)
++|....-+.- -..+.+.|+++|+.+..++
T Consensus 325 -iv~~d~~~~GGit~~~kia~lA~~~gv~v~~H~ 357 (441)
T 4a35_A 325 -FLQIDSCRLGSVNENLSVLLMAKKFEIPVCPHA 357 (441)
T ss_dssp -EECCCTTTSSHHHHHHHHHHHHHHTTCCBCCCC
T ss_pred -EEEECccccCCHHHHHHHHHHHHHcCCEEEEeC
Confidence 77777655432 2678999999999987553
No 114
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=73.53 E-value=13 Score=30.98 Aligned_cols=128 Identities=11% Similarity=-0.010 Sum_probs=70.6
Q ss_pred hhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEEecCCCHHHHHH
Q 025159 102 ELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGVSNFSCKKLGD 181 (257)
Q Consensus 102 ~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~ 181 (257)
..-...+-+.|.++|+++|..-....+.. .| ...+.|+.+..+.+...++...+. -+.+.+++
T Consensus 25 ~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~-~p---------------~~~~~~e~~~~i~~~~~~~v~~l~-~n~~~i~~ 87 (295)
T 1ydn_A 25 TADKIALINRLSDCGYARIEATSFVSPKW-VP---------------QLADSREVMAGIRRADGVRYSVLV-PNMKGYEA 87 (295)
T ss_dssp HHHHHHHHHHHTTTTCSEEEEEECSCTTT-CG---------------GGTTHHHHHHHSCCCSSSEEEEEC-SSHHHHHH
T ss_pred HHHHHHHHHHHHHcCcCEEEEccCcCccc-cc---------------cccCHHHHHHHHHhCCCCEEEEEe-CCHHHHHH
Confidence 34566677778899988877754322211 01 012456777777666566665655 56777887
Q ss_pred HHHhCCCCCceeccc--cC-------CC-CCc------HHHHHHHHHCCceEEEecCCCCCCCCCCCCCccChHHHHHHH
Q 025159 182 ILATAKIPPAANQVE--MN-------PL-WQQ------NKLREFCKAKDIQLAAYAPLGARGTIWGSNRVMECEVLKEIA 245 (257)
Q Consensus 182 ~~~~~~~~p~~~q~~--~~-------~~-~~~------~~~~~~~~~~gi~v~~~~pl~~~G~l~~~~~~~~~~~~~~ia 245 (257)
+++. +++ .+.+. .| .. ..+ .+.+++|+++|+.|.++-.... |.- .......+.+.+++
T Consensus 88 a~~~-G~~--~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~-~~e--~~~~~~~~~~~~~~ 161 (295)
T 1ydn_A 88 AAAA-HAD--EIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVV-ECP--YDGPVTPQAVASVT 161 (295)
T ss_dssp HHHT-TCS--EEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSS-EET--TTEECCHHHHHHHH
T ss_pred HHHC-CCC--EEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEe-cCC--cCCCCCHHHHHHHH
Confidence 7764 343 33332 22 01 111 4679999999999874432221 100 00122345555555
Q ss_pred H---HhCCCc
Q 025159 246 E---AKGKTV 252 (257)
Q Consensus 246 ~---~~~~s~ 252 (257)
+ +.|++.
T Consensus 162 ~~~~~~G~d~ 171 (295)
T 1ydn_A 162 EQLFSLGCHE 171 (295)
T ss_dssp HHHHHHTCSE
T ss_pred HHHHhcCCCE
Confidence 5 777654
No 115
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=73.31 E-value=38 Score=27.93 Aligned_cols=174 Identities=10% Similarity=-0.064 Sum_probs=97.8
Q ss_pred CCceecCCCCCcCCccceeCCcCCCCChhHHHHHHHHHH-HcCCceeeCCCCCCC---hHHHHHHHHHHHhCCCCCCCCc
Q 025159 12 IPDVPLKSSNRRMPVLGLGTAASPFSGSETTKLAILEAM-KLGYRHFDTATLYQT---EQPLGDAIAEALSTGIIKSRDE 87 (257)
Q Consensus 12 m~~~~l~~~~~~vs~lglG~~~~~~~~~~~~~~~l~~Al-~~Gi~~~DtA~~Yg~---e~~lg~~l~~~~~~~~~~~R~~ 87 (257)
.....++.. .--|++-+||..+.. .+.+..|+ .+|-..+=.|----+ ...-...+.- + ++..
T Consensus 8 ~d~l~i~~~-~f~SRl~~Gtgky~~------~~~~~~a~~asg~e~vtva~rR~~~~~~~~~~~~~~~-----i--~~~~ 73 (265)
T 1wv2_A 8 DTPFVIAGR-TYGSRLLVGTGKYKD------LDETRRAIEASGAEIVTVAVRRTNIGQNPDEPNLLDV-----I--PPDR 73 (265)
T ss_dssp -CCEEETTE-EESCCEEECCSCSSS------HHHHHHHHHHSCCSEEEEEGGGCCC--------------------CTTT
T ss_pred CCCeEECCE-EeecceEEecCCCCC------HHHHHHHHHHhCCCeEEEEEEeeccccCCCcchHHhh-----h--hhcC
Confidence 344556654 446899999999864 55666666 456655533321101 0001122221 1 3333
Q ss_pred EEEEeccCCCCCChhhHHHHHHHHHH-hhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe
Q 025159 88 LFIASKLWCSDAHRELVVPALQKSLE-NLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT 166 (257)
Q Consensus 88 l~i~tK~~~~~~~~~~i~~~l~~sL~-~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i 166 (257)
+.+.-.. ..+.+.++-.+..+-..+ .+|++.+-+..+..+... .-+..++.++.+.|+++|..
T Consensus 74 ~~~lpNT-ag~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~~~l---------------lpD~~~tv~aa~~L~~~Gf~ 137 (265)
T 1wv2_A 74 YTILPNT-AGCYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTL---------------FPNVVETLKAAEQLVKDGFD 137 (265)
T ss_dssp SEEEEEC-TTCCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTC---------------CBCHHHHHHHHHHHHTTTCE
T ss_pred CEECCcC-CCCCCHHHHHHHHHHHHHHcCCCCeEEEEeecCcccc---------------CcCHHHHHHHHHHHHHCCCE
Confidence 3333221 234556777777777778 788887777776554332 23478999999999999986
Q ss_pred eEEEecCCCHHHHHHHHHhCCCCCceeccccC-CC--C---CcHHHHHHHHHC-CceEEEe
Q 025159 167 KAIGVSNFSCKKLGDILATAKIPPAANQVEMN-PL--W---QQNKLREFCKAK-DIQLAAY 220 (257)
Q Consensus 167 r~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~-~~--~---~~~~~~~~~~~~-gi~v~~~ 220 (257)
- +=+++-++....++.+.. +.++ .+.. +. . .+.++++..++. +++|++-
T Consensus 138 V-lpy~~dd~~~akrl~~~G---~~aV-mPlg~pIGsG~Gi~~~~lI~~I~e~~~vPVI~e 193 (265)
T 1wv2_A 138 V-MVYTSDDPIIARQLAEIG---CIAV-MPLAGLIGSGLGICNPYNLRIILEEAKVPVLVD 193 (265)
T ss_dssp E-EEEECSCHHHHHHHHHSC---CSEE-EECSSSTTCCCCCSCHHHHHHHHHHCSSCBEEE
T ss_pred E-EEEeCCCHHHHHHHHHhC---CCEE-EeCCccCCCCCCcCCHHHHHHHHhcCCCCEEEe
Confidence 4 556777877777775543 2233 1111 11 1 124566666654 8999984
No 116
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=72.43 E-value=51 Score=29.09 Aligned_cols=150 Identities=13% Similarity=0.068 Sum_probs=92.4
Q ss_pred CChhHHHHHHHHHHHcCCceeeCCCC------CCC---h------HHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCCh
Q 025159 37 SGSETTKLAILEAMKLGYRHFDTATL------YQT---E------QPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHR 101 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~Gi~~~DtA~~------Yg~---e------~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~ 101 (257)
.+.++..+..+.+++.|++.|-.-.. +|. + ...=+++|+.+ | +++-|...... .+++
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~~G~~~~~~~~~~d~e~v~avR~av--G-----~d~~L~vDan~-~~t~ 216 (433)
T 3rcy_A 145 TSADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAV--G-----DKADLLFGTHG-QFTT 216 (433)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHH--T-----TSSEEEECCCS-CBCH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCcccccCCCcchhhHHHHHHHHHHHHHHh--C-----CCCeEEEeCCC-CCCH
Confidence 47788889999999999998875321 121 1 11223444442 2 45556666532 3444
Q ss_pred hhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe-eEEEecCCCHHHHH
Q 025159 102 ELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT-KAIGVSNFSCKKLG 180 (257)
Q Consensus 102 ~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~ 180 (257)
+...+ +-+.|+.+++ .+++.|... +-++.+.++++.-.| -..|=+-++++.+.
T Consensus 217 ~~A~~-~~~~Le~~~i-----~~iEeP~~~--------------------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~ 270 (433)
T 3rcy_A 217 AGAIR-LGQAIEPYSP-----LWYEEPVPP--------------------DNVGAMAQVARAVRIPVATGERLTTKAEFA 270 (433)
T ss_dssp HHHHH-HHHHHGGGCC-----SEEECCSCT--------------------TCHHHHHHHHHHSSSCEEECTTCCSHHHHH
T ss_pred HHHHH-HHHHhhhcCC-----CEEECCCCh--------------------hhHHHHHHHHhccCCCEEecCCCCCHHHHH
Confidence 43332 3345666554 455666321 125667777776555 34566778899999
Q ss_pred HHHHhCCCCCceeccccCCCC---CcHHHHHHHHHCCceEEEecC
Q 025159 181 DILATAKIPPAANQVEMNPLW---QQNKLREFCKAKDIQLAAYAP 222 (257)
Q Consensus 181 ~~~~~~~~~p~~~q~~~~~~~---~~~~~~~~~~~~gi~v~~~~p 222 (257)
++++...++ ++|...+-+. .-..+.+.|+++|+.++.+++
T Consensus 271 ~~l~~g~~D--~v~~d~~~~GGit~~~kia~lA~~~gv~~~~h~~ 313 (433)
T 3rcy_A 271 PVLREGAAA--ILQPALGRAGGIWEMKKVAAMAEVYNAQMAPHLY 313 (433)
T ss_dssp HHHHTTCCS--EECCCHHHHTHHHHHHHHHHHHHTTTCEECCCCS
T ss_pred HHHHcCCCC--EEEeCchhcCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 999876655 7766654332 226789999999999988764
No 117
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=72.41 E-value=52 Score=29.13 Aligned_cols=67 Identities=12% Similarity=0.124 Sum_probs=48.6
Q ss_pred HHHHHHHHHcCCe-eEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCC---cHHHHHHHHHCCceEEEecC
Q 025159 154 WEAMEECQNLGYT-KAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQ---QNKLREFCKAKDIQLAAYAP 222 (257)
Q Consensus 154 ~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~---~~~~~~~~~~~gi~v~~~~p 222 (257)
++.+.++++.-.| -..|=+-++.+.+.++++...++ ++|....-+.- -..+.+.|+++|+.++.++.
T Consensus 280 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d--~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 350 (440)
T 3t6c_A 280 TEWLKMLRQQSSTPIAMGELFVNVNEWKPLIDNKLID--YIRCHISSIGGITPAKKIAIYSELNGVRTAWHSP 350 (440)
T ss_dssp GGGHHHHHHHCCSCEEECTTCCSHHHHHHHHHTTCCS--EECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCS
T ss_pred HHHHHHHHhhcCCCEEeCcccCCHHHHHHHHHcCCcc--ceeechhhhCCHHHHHHHHHHHHHcCCEEEeccC
Confidence 4556677765444 35566788999999999876655 77776654322 36789999999999987765
No 118
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=71.23 E-value=38 Score=29.21 Aligned_cols=35 Identities=6% Similarity=-0.034 Sum_probs=25.8
Q ss_pred HHHHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCC
Q 025159 155 EAMEECQNLGYTKAIGVSNFSCKKLGDILATAKIP 189 (257)
Q Consensus 155 ~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~ 189 (257)
+.+.++++.=.+--|++..++++..+++++....+
T Consensus 283 ~~~~~i~~~~~iPvi~~Ggi~~~~a~~~l~~g~aD 317 (365)
T 2gou_A 283 SFKRALREAYQGVLIYAGRYNAEKAEQAINDGLAD 317 (365)
T ss_dssp HHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHCCCcEEEeCCCCHHHHHHHHHCCCcc
Confidence 34455666555677898999999999999876555
No 119
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=71.14 E-value=50 Score=28.48 Aligned_cols=152 Identities=11% Similarity=0.063 Sum_probs=92.1
Q ss_pred CChhHHHHHHHHHHHc-CCceeeCCCCCCC---hHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHH
Q 025159 37 SGSETTKLAILEAMKL-GYRHFDTATLYQT---EQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSL 112 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~-Gi~~~DtA~~Yg~---e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL 112 (257)
.+.++..+....+++. |++.|-.--.... +...=+++|+. --+++-|...... .++.+... .+-+.|
T Consensus 147 ~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a-------~g~~~~l~vDan~-~~~~~~A~-~~~~~l 217 (383)
T 3i4k_A 147 LPLDVAVAEIEERIEEFGNRSFKLKMGAGDPAEDTRRVAELARE-------VGDRVSLRIDINA-RWDRRTAL-HYLPIL 217 (383)
T ss_dssp CCHHHHHHHHHHHHHHHCCSEEEEECCSSCHHHHHHHHHHHHHT-------TTTTSEEEEECTT-CSCHHHHH-HHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCcEEEEeeCCCCHHHHHHHHHHHHHH-------cCCCCEEEEECCC-CCCHHHHH-HHHHHH
Confidence 3567777777788887 9998865432211 22222344443 1345666666533 33444333 234566
Q ss_pred HhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe-eEEEecCCCHHHHHHHHHhCCCCCc
Q 025159 113 ENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT-KAIGVSNFSCKKLGDILATAKIPPA 191 (257)
Q Consensus 113 ~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~p~ 191 (257)
+.+++++ +..|... +-+..+.++++.-.| -..|=+-++++.+.++++....+
T Consensus 218 ~~~~i~~-----iEqP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d-- 270 (383)
T 3i4k_A 218 AEAGVEL-----FEQPTPA--------------------DDLETLREITRRTNVSVMADESVWTPAEALAVVKAQAAD-- 270 (383)
T ss_dssp HHTTCCE-----EESCSCT--------------------TCHHHHHHHHHHHCCEEEESTTCSSHHHHHHHHHHTCCS--
T ss_pred HhcCCCE-----EECCCCh--------------------hhHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCC--
Confidence 6666544 4555321 124556666665344 34455678899999999877665
Q ss_pred eeccccCCCCC---cHHHHHHHHHCCceEEEecCCC
Q 025159 192 ANQVEMNPLWQ---QNKLREFCKAKDIQLAAYAPLG 224 (257)
Q Consensus 192 ~~q~~~~~~~~---~~~~~~~~~~~gi~v~~~~pl~ 224 (257)
++|+..+-+.- -..+.+.|+++|+.++..+.+.
T Consensus 271 ~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~e 306 (383)
T 3i4k_A 271 VIALKTTKHGGLLESKKIAAIAEAGGLACHGATSLE 306 (383)
T ss_dssp EEEECTTTTTSHHHHHHHHHHHHHTTCEEEECCSCC
T ss_pred EEEEcccccCCHHHHHHHHHHHHHcCCeEEeCCCCc
Confidence 77777655432 2678999999999998776654
No 120
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=71.02 E-value=51 Score=28.50 Aligned_cols=150 Identities=9% Similarity=0.054 Sum_probs=90.9
Q ss_pred CChhHHHHHHHHHHHc-CCceeeCCCCCCC---hHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHH
Q 025159 37 SGSETTKLAILEAMKL-GYRHFDTATLYQT---EQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSL 112 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~-Gi~~~DtA~~Yg~---e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL 112 (257)
.+.++..+.++.+++. |++.|-.--.... +...=+++|+.+ + +++-|...... .++++...+ +-+.|
T Consensus 166 ~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~d~~~v~avR~a~--G-----~~~~l~vDaN~-~~~~~~A~~-~~~~l 236 (383)
T 3toy_A 166 LDARDDERTLRTACDEHGFRAIKSKGGHGDLATDEAMIKGLRALL--G-----PDIALMLDFNQ-SLDPAEATR-RIARL 236 (383)
T ss_dssp CCHHHHHHHHHHHHHTSCCCEEEEECCSSCHHHHHHHHHHHHHHH--C-----TTSEEEEECTT-CSCHHHHHH-HHHHH
T ss_pred CCHHHHHHHHHHHHHccCCcEEEEecCCCCHHHHHHHHHHHHHHh--C-----CCCeEEEeCCC-CCCHHHHHH-HHHHH
Confidence 4778888888999999 9998854332211 222233455542 2 44455555432 334443322 33345
Q ss_pred HhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe-eEEEecCCCHHHHHHHHHhCCCCCc
Q 025159 113 ENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT-KAIGVSNFSCKKLGDILATAKIPPA 191 (257)
Q Consensus 113 ~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~p~ 191 (257)
+.++ +.++..|... +-++.+.++++.-.| -..|=+-+++..+.++++...++
T Consensus 237 ~~~~-----i~~iEeP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d-- 289 (383)
T 3toy_A 237 ADYD-----LTWIEEPVPQ--------------------ENLSGHAAVRERSEIPIQAGENWWFPRGFAEAIAAGASD-- 289 (383)
T ss_dssp GGGC-----CSEEECCSCT--------------------TCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCCS--
T ss_pred HhhC-----CCEEECCCCc--------------------chHHHHHHHHhhcCCCEEeCCCcCCHHHHHHHHHcCCCC--
Confidence 5555 4455666321 124566777775455 34566778889999998876655
Q ss_pred eeccccCCCCC---cHHHHHHHHHCCceEEEecC
Q 025159 192 ANQVEMNPLWQ---QNKLREFCKAKDIQLAAYAP 222 (257)
Q Consensus 192 ~~q~~~~~~~~---~~~~~~~~~~~gi~v~~~~p 222 (257)
++|....-+.- -..+.+.|+++|+.++.++.
T Consensus 290 ~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 323 (383)
T 3toy_A 290 FIMPDLMKVGGITGWLNVAGQADAASIPMSSHIL 323 (383)
T ss_dssp EECCCTTTTTHHHHHHHHHHHHHHHTCCBCCCSC
T ss_pred EEEeCccccCCHHHHHHHHHHHHHcCCEEeecCH
Confidence 77776654321 25789999999999876553
No 121
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=70.99 E-value=52 Score=28.58 Aligned_cols=154 Identities=10% Similarity=-0.006 Sum_probs=92.1
Q ss_pred CChhHHHHHHHHHHHcCCceeeCCCCCCC-----------hHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHH
Q 025159 37 SGSETTKLAILEAMKLGYRHFDTATLYQT-----------EQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVV 105 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~-----------e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~ 105 (257)
.+.++..+.++.+++.|++.|=.--.... +...=+++|+.+ + ++-|..-.. ..++++
T Consensus 164 ~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~~~~~~~~di~~v~avR~a~------~--d~~L~vDaN-~~w~~~--- 231 (393)
T 3u9i_A 164 GSVTAAARAAQAIVARGVTTIKIKIGAGDPDATTIRTMEHDLARIVAIRDVA------P--TARLILDGN-CGYTAP--- 231 (393)
T ss_dssp --CHHHHHHHHHHHTTTCCEEEEECC-------CHHHHHHHHHHHHHHHHHS------T--TSEEEEECC-SCCCHH---
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEeCCCcccccccccHHHHHHHHHHHHHHC------C--CCeEEEEcc-CCCCHH---
Confidence 36678888888889999997743221111 111223345441 2 233333322 223332
Q ss_pred HHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe-eEEEecCCCHHHHHHHHH
Q 025159 106 PALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT-KAIGVSNFSCKKLGDILA 184 (257)
Q Consensus 106 ~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~ 184 (257)
...+.+++|.-+.+++.++..|.... -++.+.++.+.-.| -+.|=|-++...+.++++
T Consensus 232 -~A~~~~~~L~~~~~~i~~iEeP~~~~--------------------d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~ 290 (393)
T 3u9i_A 232 -DALRLLDMLGVHGIVPALFEQPVAKD--------------------DEEGLRRLTATRRVPVAADESVASATDAARLAR 290 (393)
T ss_dssp -HHHHHHHTTTTTTCCCSEEECCSCTT--------------------CTTHHHHHHHTCSSCEEESTTCCSHHHHHHHHH
T ss_pred -HHHHHHHHHhhCCCCeEEEECCCCCC--------------------cHHHHHHHHhhCCCcEEeCCcCCCHHHHHHHHH
Confidence 23345566632346888999885421 13556667665444 466788899999999988
Q ss_pred hCCCCCceeccccCCC--CCcHHHHHHHHHCCceEEEecCCCC
Q 025159 185 TAKIPPAANQVEMNPL--WQQNKLREFCKAKDIQLAAYAPLGA 225 (257)
Q Consensus 185 ~~~~~p~~~q~~~~~~--~~~~~~~~~~~~~gi~v~~~~pl~~ 225 (257)
...++ ++|....-. ..-..+.+.|+++|+.++..+.+.+
T Consensus 291 ~~a~d--~i~~k~~~GGit~~~~ia~~A~~~gi~~~~~~~~es 331 (393)
T 3u9i_A 291 NAAVD--VLNIKLMKCGIVEALDIAAIARTAGLHLMIGGMVES 331 (393)
T ss_dssp TTCCS--EEEECHHHHCHHHHHHHHHHHHHHTCEEEECCSSCC
T ss_pred cCCCC--EEEecccccCHHHHHHHHHHHHHcCCeEEecCCccc
Confidence 76655 777665541 1126789999999999998877654
No 122
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=70.92 E-value=58 Score=29.06 Aligned_cols=98 Identities=9% Similarity=0.023 Sum_probs=61.5
Q ss_pred CChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEEe--cCCCH
Q 025159 99 AHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGV--SNFSC 176 (257)
Q Consensus 99 ~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGv--s~~~~ 176 (257)
.+++.+.+-.++.+++. ++++|..|-+... -+.|..|.+.. ..+|.-+|= +..++
T Consensus 281 ~t~~Elid~y~~lle~y-----pIv~IEDPl~~dD-----------------~eg~a~Lt~~l-g~~iqIvGDDl~vTn~ 337 (452)
T 3otr_A 281 LTGEKLKEVYEGWLKKY-----PIISVEDPFDQDD-----------------FASFSAFTKDV-GEKTQVIGDDILVTNI 337 (452)
T ss_dssp ECHHHHHHHHHHHHHHS-----CEEEEECCSCTTC-----------------HHHHHHHHHHH-TTTSEEEESTTTTTCH
T ss_pred ccHHHHHHHHHHHHhhh-----CceEEecCCChhh-----------------HHHHHHHHHhh-CCCeEEEeCccccCCH
Confidence 35677777777777643 5899998865322 24455554433 135766773 34579
Q ss_pred HHHHHHHHhCCCCCceeccccCCCCC---cHHHHHHHHHCCceEEEec
Q 025159 177 KKLGDILATAKIPPAANQVEMNPLWQ---QNKLREFCKAKDIQLAAYA 221 (257)
Q Consensus 177 ~~l~~~~~~~~~~p~~~q~~~~~~~~---~~~~~~~~~~~gi~v~~~~ 221 (257)
..+.++++..... ++++..|-+.. ..++...|+++|++++.-.
T Consensus 338 ~~i~~~Ie~~a~n--~IlIKvnQIGgITEalka~~lA~~~G~~vmvsh 383 (452)
T 3otr_A 338 LRIEKALKDKACN--CLLLKVNQIGSVTEAIEACLLAQKSGWGVQVSH 383 (452)
T ss_dssp HHHHHHHHHTCCS--EEEECHHHHCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHhcCCCC--EEEeeccccccHHHHHHHHHHHHHcCCeEEEeC
Confidence 9999998876544 44444332222 2578899999999977654
No 123
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=70.92 E-value=47 Score=28.04 Aligned_cols=154 Identities=12% Similarity=0.037 Sum_probs=90.9
Q ss_pred ChhHHHHHHHHHHHcCCceeeCCCCCCC-hH--HHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHh
Q 025159 38 GSETTKLAILEAMKLGYRHFDTATLYQT-EQ--PLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLEN 114 (257)
Q Consensus 38 ~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~-e~--~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~ 114 (257)
+.++..+.++.+++.|++.|-.--.-.. +. ..=+++++.+ -+++-|..-.. ..++++...+-+ +.|+.
T Consensus 116 ~~e~~~~~a~~~~~~G~~~~KiKvg~~~~~~d~~~v~avr~~~-------g~~~~L~vDaN-~~~~~~~A~~~~-~~l~~ 186 (332)
T 2ozt_A 116 SGQAALEQWQQSWQRGQTTFKWKVGVMSPEEEQAILKALLAAL-------PPGAKLRLDAN-GSWDRATANRWF-AWLDR 186 (332)
T ss_dssp TGGGHHHHHHHHHHTTCCEEEEECSSSCHHHHHHHHHHHHHHS-------CTTCEEEEECT-TCCCHHHHHHHH-HHHHH
T ss_pred ChHHHHHHHHHHHHcCCcEEEEEeCCCChHHHHHHHHHHHHHc-------CCCCEEEEccc-CCCCHHHHHHHH-HHHHh
Confidence 4566778888888999998754322211 11 2223445441 23343433332 234555554444 33555
Q ss_pred hCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe-eEEEecCCCHHHHHHHHHhCCCCCcee
Q 025159 115 LQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT-KAIGVSNFSCKKLGDILATAKIPPAAN 193 (257)
Q Consensus 115 Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~p~~~ 193 (257)
++ ..++.++..|... +-++.+.+|.+.-.| -..|=|-++...+.++++....+ ++
T Consensus 187 ~~--~~~i~~iEqP~~~--------------------~d~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~a~~--~i 242 (332)
T 2ozt_A 187 HG--NGKIEYVEQPLPP--------------------DQWQALLSLAQTVTTAIALDESVVSAAEVQRWVDRGWPG--FF 242 (332)
T ss_dssp HC--CTTEEEEECCSCT--------------------TCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCS--EE
T ss_pred hc--cCCcceeECCCCC--------------------CCHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCC--EE
Confidence 53 1378899988542 124556666664443 35667788999999998865444 55
Q ss_pred ccccCCCCCcHHHHHHHHHC--CceEEEecCCC
Q 025159 194 QVEMNPLWQQNKLREFCKAK--DIQLAAYAPLG 224 (257)
Q Consensus 194 q~~~~~~~~~~~~~~~~~~~--gi~v~~~~pl~ 224 (257)
|+..+...--..+.+.|+++ |+.++..+.+.
T Consensus 243 ~ik~~~~GGi~~i~~~A~~~~~gi~~~~~~~~e 275 (332)
T 2ozt_A 243 VIKTALFGDPDSLSLLLRRGLEPQRLVFSSALE 275 (332)
T ss_dssp EECHHHHSCHHHHHHHHHTTCCGGGEEEBCCSC
T ss_pred EEChhhhCCHHHHHHHHHHhCCCCcEEEeCCcc
Confidence 55443322224789999999 99999887654
No 124
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=70.12 E-value=56 Score=28.56 Aligned_cols=153 Identities=16% Similarity=0.168 Sum_probs=92.6
Q ss_pred CChhHHHHHHHHHHHcCCceeeCCCCCCCh--HHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHh
Q 025159 37 SGSETTKLAILEAMKLGYRHFDTATLYQTE--QPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLEN 114 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e--~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~ 114 (257)
.+.++..+..+.+.+.|++.|=.....+.+ ...=+++|+.+ + +++-|..-... .++++...+ .++.
T Consensus 187 ~~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~v~~vR~~~--g-----~~~~l~vDaN~-~~~~~~A~~----~~~~ 254 (412)
T 4h1z_A 187 DTRAKRAELAAAWQAKGFSSFKFASPVADDGVAKEMEILRERL--G-----PAVRIACDMHW-AHTASEAVA----LIKA 254 (412)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEEGGGCTTCHHHHHHHHHHHH--C-----SSSEEEEECCS-CCCHHHHHH----HHHH
T ss_pred CcHHHHHHHHHHHHhcCcceeccccccchhhHHHHHHHHHhcc--C-----CeEEEEecccc-CCCHHHHHH----HHHh
Confidence 456777788888889999987544333322 12224455542 2 33444443322 234333222 2333
Q ss_pred hCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe-eEEEecCCCHHHHHHHHHhCCCCCcee
Q 025159 115 LQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT-KAIGVSNFSCKKLGDILATAKIPPAAN 193 (257)
Q Consensus 115 Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~p~~~ 193 (257)
| +..++.++..|... +-++.+.+|++.-.| -+.|=|-++...+.++++...++ ++
T Consensus 255 l--~~~~l~~iEqP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d--iv 310 (412)
T 4h1z_A 255 M--EPHGLWFAEAPVRT--------------------EDIDGLARVAASVSTAIAVGEEWRTVHDMVPRVARRALA--IV 310 (412)
T ss_dssp H--GGGCEEEEECCSCT--------------------TCHHHHHHHHHHCSSEEEECTTCCSHHHHHHHHHTTCCS--EE
T ss_pred h--cccccceecCCCCc--------------------cchHHHHHHHhhcCCccccCCcccchHhHHHHHHcCCCC--EE
Confidence 3 23578888888432 124667777776554 45677888999999998876655 67
Q ss_pred ccccCC--CCCcHHHHHHHHHCCceEEEecCCCC
Q 025159 194 QVEMNP--LWQQNKLREFCKAKDIQLAAYAPLGA 225 (257)
Q Consensus 194 q~~~~~--~~~~~~~~~~~~~~gi~v~~~~pl~~ 225 (257)
|....- +..-..+.+.|+++|+.++.++.++.
T Consensus 311 ~~d~~~GGit~~~kia~~A~~~gi~v~~h~~~~~ 344 (412)
T 4h1z_A 311 QPEMGHKGITQFMRIGAYAHVHHIKVIPHATIGA 344 (412)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTCEECCCCCSSC
T ss_pred EecCCCCChHHHHHHHHHHHHCCCcEEecCCcch
Confidence 665421 01125788999999999998887764
No 125
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=69.63 E-value=53 Score=28.40 Aligned_cols=144 Identities=14% Similarity=0.073 Sum_probs=79.5
Q ss_pred hHHHHHHHHHHHcCCceeeCCC--CCC------C-hH--HHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHH
Q 025159 40 ETTKLAILEAMKLGYRHFDTAT--LYQ------T-EQ--PLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPAL 108 (257)
Q Consensus 40 ~~~~~~l~~Al~~Gi~~~DtA~--~Yg------~-e~--~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l 108 (257)
++..+....+.+.|++.|-.-. .|+ . +. .+=+++++.+ + +++-|..-.. ..++++...+-
T Consensus 150 e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~~~~~~~~~e~v~avR~~~--g-----~d~~l~vDan-~~~~~~~ai~~- 220 (392)
T 3p3b_A 150 ALMQEEAMQGYAKGQRHFKIKVGRGGRHMPLWEGTKRDIAIVRGISEVA--G-----PAGKIMIDAN-NAYNLNLTKEV- 220 (392)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCHHHHTSCHHHHHHHHHHHHHHHHHHH--C-----TTCCEEEECT-TCCCHHHHHHH-
T ss_pred HHHHHHHHHHHHhCCCEEEECcCcCcccCCccccHHHHHHHHHHHHHHh--C-----CCCeEEEECC-CCCCHHHHHHH-
Confidence 6677777888899998775322 221 0 11 1112233321 2 2333333332 23344433332
Q ss_pred HHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHc-----CCeeEEEecCCCHHHHHHHH
Q 025159 109 QKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNL-----GYTKAIGVSNFSCKKLGDIL 183 (257)
Q Consensus 109 ~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-----G~ir~iGvs~~~~~~l~~~~ 183 (257)
++.|. ..++.++..|.. +.++.+.++++. -.|--.+---++++.+++++
T Consensus 221 ---~~~l~--~~~i~~iE~P~~---------------------~d~~~~~~l~~~l~~~g~~iPIa~dE~~~~~~~~~~i 274 (392)
T 3p3b_A 221 ---LAALS--DVNLYWLEEAFH---------------------EDEALYEDLKEWLGQRGQNVLIADGEGLASPHLIEWA 274 (392)
T ss_dssp ---HHHTT--TSCEEEEECSSS---------------------CCHHHHHHHHHHHHHHTCCCEEEECCSSCCTTHHHHH
T ss_pred ---HHHHH--hcCCCEEecCCc---------------------ccHHHHHHHHHhhccCCCCccEEecCCCCHHHHHHHH
Confidence 33333 246667777632 124555666665 34432322266778889998
Q ss_pred HhCCCCCceeccccCCC--CCcHHHHHHHHHCCceEEEe
Q 025159 184 ATAKIPPAANQVEMNPL--WQQNKLREFCKAKDIQLAAY 220 (257)
Q Consensus 184 ~~~~~~p~~~q~~~~~~--~~~~~~~~~~~~~gi~v~~~ 220 (257)
+....+ ++|+..+-+ ..-..+.+.|+++|+.++.+
T Consensus 275 ~~~~~d--~v~ik~~~~Git~~~~i~~~A~~~gi~~~~h 311 (392)
T 3p3b_A 275 TRGRVD--VLQYDIIWPGFTHWMELGEKLDAHGLRSAPH 311 (392)
T ss_dssp HTTSCC--EECCBTTTBCHHHHHHHHHHHHHTTCEECCB
T ss_pred HcCCCC--EEEeCccccCHHHHHHHHHHHHHcCCEEEec
Confidence 876655 777766654 11267899999999999886
No 126
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=68.72 E-value=49 Score=27.36 Aligned_cols=97 Identities=10% Similarity=0.084 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCCC
Q 025159 150 FKSVWEAMEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTI 229 (257)
Q Consensus 150 ~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~l 229 (257)
.+.+...++.+++.+- .|-|-+|.++.++++++... . .+| ..+....+.++++.+.+++++++.+.--+.
T Consensus 67 ~~Rv~pvi~~l~~~~v--~iSIDT~~~~Va~~al~aGa-~-iIN--DVs~g~~d~~m~~~va~~~~~~vlMH~~~~---- 136 (270)
T 4hb7_A 67 LNRVLPVVEAIVGFDV--KISVDTFRSEVAEACLKLGV-D-MIN--DQWAGLYDHRMFQIVAKYDAEIILMHNGNG---- 136 (270)
T ss_dssp HHHHHHHHHHHTTSSS--EEEEECSCHHHHHHHHHHTC-C-EEE--ETTTTSSCTHHHHHHHHTTCEEEEECCCSS----
T ss_pred HHHHHHHHHHhhcCCC--eEEEECCCHHHHHHHHHhcc-c-eec--cccccccchhHHHHHHHcCCCeEEeccccC----
Confidence 4456667777776553 48999999999999998653 2 233 444455567899999999999999874322
Q ss_pred CCCCCccCh------HHHHHHHHHhCCCcccccC
Q 025159 230 WGSNRVMEC------EVLKEIAEAKGKTVAQVLI 257 (257)
Q Consensus 230 ~~~~~~~~~------~~~~~ia~~~~~s~~qval 257 (257)
+.+..... ..-.+.|.+.|++..++.|
T Consensus 137 -p~~~~vv~ev~~~l~~~i~~a~~aGI~~~~Iil 169 (270)
T 4hb7_A 137 -NRDEPVVEEMLTSLLAQAHQAKIAGIPSNKIWL 169 (270)
T ss_dssp -CCSSCHHHHHHHHHHHHHHHHHHTTCCGGGEEE
T ss_pred -CccccchhHHHHHHHHHHHHHHHcCCCCceEEE
Confidence 11211111 1112446667887776643
No 127
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=68.53 E-value=56 Score=27.99 Aligned_cols=154 Identities=12% Similarity=0.072 Sum_probs=93.7
Q ss_pred CChhHHHHHHHHHHHcCCceeeCCCCCC---ChHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHH
Q 025159 37 SGSETTKLAILEAMKLGYRHFDTATLYQ---TEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLE 113 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg---~e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~ 113 (257)
.+.++..+.++.+++.|++.|-.--... .+...=+++|+.+ +...+.|=. +..++++... +.++
T Consensus 142 ~~~e~~~~~a~~~~~~G~~~iK~Kvg~~~~~~d~~~v~avr~~~------~~~~l~vDa---N~~~~~~~A~----~~~~ 208 (365)
T 3ik4_A 142 GDEVHAAASAKAILARGIKSIKVKTAGVDVAYDLARLRAIHQAA------PTAPLIVDG---NCGYDVERAL----AFCA 208 (365)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEECCSSCHHHHHHHHHHHHHHS------SSCCEEEEC---TTCCCHHHHH----HHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHHHHHhC------CCCeEEEEC---CCCCCHHHHH----HHHH
Confidence 4678888888889999999875432222 1222234455541 212333332 2233443322 3344
Q ss_pred hhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe-eEEEecCCCHHHHHHHHHhCCCCCce
Q 025159 114 NLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT-KAIGVSNFSCKKLGDILATAKIPPAA 192 (257)
Q Consensus 114 ~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~p~~ 192 (257)
+|..+.+++.++..|... +-++.+.+++++-.| -+.|=|-++...+.++++...++ +
T Consensus 209 ~L~~~~~~i~~iEeP~~~--------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d--~ 266 (365)
T 3ik4_A 209 ACKAESIPMVLFEQPLPR--------------------EDWAGMAQVTAQSGFAVAADESARSAHDVLRIAREGTAS--V 266 (365)
T ss_dssp HHHHTTCCEEEEECCSCT--------------------TCHHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHHTCCS--E
T ss_pred HHhhCCCCceEEECCCCc--------------------ccHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHhCCCC--E
Confidence 441123588899988432 124666777765444 45677788999999998877665 6
Q ss_pred eccccCCC--CCcHHHHHHHHHCCceEEEecCCCC
Q 025159 193 NQVEMNPL--WQQNKLREFCKAKDIQLAAYAPLGA 225 (257)
Q Consensus 193 ~q~~~~~~--~~~~~~~~~~~~~gi~v~~~~pl~~ 225 (257)
+|...+-. ..-..+.+.|+++|+.++..+.+.+
T Consensus 267 v~ik~~~GGit~~~~i~~~A~~~gi~~~~~~~~es 301 (365)
T 3ik4_A 267 INIKLMKAGVAEGLKMIAIAQAAGLGLMIGGMVES 301 (365)
T ss_dssp EEECHHHHCHHHHHHHHHHHHHHTCEEEECCSSCC
T ss_pred EEEcCCccCHHHHHHHHHHHHHcCCeEEecCCccc
Confidence 76665441 1125789999999999999877654
No 128
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=68.43 E-value=58 Score=28.15 Aligned_cols=162 Identities=14% Similarity=0.119 Sum_probs=94.8
Q ss_pred CcCCccceeCCcCCCCChhHHHHHHHHHHHcCCceeeCCCCCCC---hHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCC
Q 025159 22 RRMPVLGLGTAASPFSGSETTKLAILEAMKLGYRHFDTATLYQT---EQPLGDAIAEALSTGIIKSRDELFIASKLWCSD 98 (257)
Q Consensus 22 ~~vs~lglG~~~~~~~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~---e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~ 98 (257)
-+++....+... + .+.++..+.++.+.+.|++.|=.-....+ +...=+++|+.+ | +++.|..-... .
T Consensus 150 ~~~~~y~~~~~~-~-~~~~~~~~~~~~~~~~G~~~~Kikvg~~~~~~d~~~v~avR~~~--G-----~~~~l~vDaN~-~ 219 (388)
T 4h83_A 150 NELPMIAIGGYY-G-EPLGSIADEMHNYQELGLAGVKFKVGGLSAAEDAARITAAREAA--G-----DDFIICIDANQ-G 219 (388)
T ss_dssp SEEEEEEEECCT-T-CTTCSHHHHHHHHHHHTBSEEEEECSSSCHHHHHHHHHHHHHHH--C-----SSSEEEEECTT-C
T ss_pred CceEEEeecccc-C-CCHHHHHHHHHHHHHcCCceEeecCCCCCHHHHHHHHHHHHHhc--C-----CCeEEEEecCc-C
Confidence 345555444332 1 34566778888899999998743321111 112223455442 2 44444444332 2
Q ss_pred CChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe-eEEEecCCCHH
Q 025159 99 AHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT-KAIGVSNFSCK 177 (257)
Q Consensus 99 ~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~ 177 (257)
++++.. .+.++.|. .+++.++..|... .+-++.+.++++...| -+.|=|-++..
T Consensus 220 ~~~~~A----~~~~~~l~--~~~~~~iEeP~~~-------------------~~d~~~~~~l~~~~~ipIa~dE~~~~~~ 274 (388)
T 4h83_A 220 YKPAVA----VDLSRRIA--DLNIRWFEEPVEW-------------------HNDKRSMRDVRYQGSVPVCAGQTEFSAS 274 (388)
T ss_dssp BCHHHH----HHHHHHTT--TSCCCCEESCBCS-------------------TTHHHHHHHHHHHSSSCEEECTTCSSHH
T ss_pred CCHHHH----HHHHHHhh--hcCcceeecCccc-------------------ccchHHHHHHHhhcCCCccCCccccChH
Confidence 343332 23344443 3577778887431 1235667777776665 45677889999
Q ss_pred HHHHHHHhCCCCCceeccccCCCCC---cHHHHHHHHHCCceEEEe
Q 025159 178 KLGDILATAKIPPAANQVEMNPLWQ---QNKLREFCKAKDIQLAAY 220 (257)
Q Consensus 178 ~l~~~~~~~~~~p~~~q~~~~~~~~---~~~~~~~~~~~gi~v~~~ 220 (257)
.+.++++...++ ++|....-+.- -..+.+.|+.+|+.+..+
T Consensus 275 ~~~~~i~~~a~d--~i~~d~~~~GGit~~~kia~~A~~~gv~v~~h 318 (388)
T 4h83_A 275 GCRDLMETGAID--VCNFDSSWSGGPTAWLRTAAIATSYDVQMGHH 318 (388)
T ss_dssp HHHHHHHHTCCS--EECCCGGGTTCHHHHHHHHHHHHHTTCEECCC
T ss_pred hHHHHHHcCCCC--eEeecceeCCCHHHHHHHHHHHHHCCCEEEec
Confidence 999999887665 77766543322 267889999999987544
No 129
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=68.14 E-value=51 Score=27.36 Aligned_cols=97 Identities=11% Similarity=0.029 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHHc-CCeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCC
Q 025159 150 FKSVWEAMEECQNL-GYTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGT 228 (257)
Q Consensus 150 ~~~~~~~l~~l~~~-G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~ 228 (257)
.+.+...++.+++. +. -|.|-+++++.++++++.. .+.+|-+ +.. ...++++.++++|++++.+.-- |.
T Consensus 75 ~~rv~pvi~~l~~~~~~--piSIDT~~~~va~aAl~aG--a~iINdv--sg~-~d~~~~~~~a~~~~~vVlmh~~---G~ 144 (282)
T 1aj0_A 75 LQRVIPVVEAIAQRFEV--WISVDTSKPEVIRESAKVG--AHIINDI--RSL-SEPGALEAAAETGLPVCLMHMQ---GN 144 (282)
T ss_dssp HHHHHHHHHHHHHHCCC--EEEEECCCHHHHHHHHHTT--CCEEEET--TTT-CSTTHHHHHHHHTCCEEEECCS---SC
T ss_pred HHHHHHHHHHHHhhcCC--eEEEeCCCHHHHHHHHHcC--CCEEEEC--CCC-CCHHHHHHHHHhCCeEEEEccC---CC
Confidence 34455666666655 43 4899999999999999973 3445533 333 4457999999999999998642 32
Q ss_pred CC-CCCC--c--------cChHHHHHHHHHhCCCccccc
Q 025159 229 IW-GSNR--V--------MECEVLKEIAEAKGKTVAQVL 256 (257)
Q Consensus 229 l~-~~~~--~--------~~~~~~~~ia~~~~~s~~qva 256 (257)
-. .... . ..-....+.|.+.|+.+.++.
T Consensus 145 p~tm~~~~~y~d~~~ev~~~l~~~i~~a~~~Gi~~~~Ii 183 (282)
T 1aj0_A 145 PKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKEKLL 183 (282)
T ss_dssp TTCCSCCCCCSCHHHHHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred CccccccCccchHHHHHHHHHHHHHHHHHHcCCChhhEE
Confidence 11 1111 0 011334455677898877664
No 130
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=67.39 E-value=50 Score=26.95 Aligned_cols=182 Identities=14% Similarity=0.056 Sum_probs=94.6
Q ss_pred CChhHHHHHHHHHHHcCCceeeCCCCCC------ChHHHHHH---HHHHHhCCCCCCCCcEEEEeccCCC-CCChhhHHH
Q 025159 37 SGSETTKLAILEAMKLGYRHFDTATLYQ------TEQPLGDA---IAEALSTGIIKSRDELFIASKLWCS-DAHRELVVP 106 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg------~e~~lg~~---l~~~~~~~~~~~R~~l~i~tK~~~~-~~~~~~i~~ 106 (257)
.+.+++.++++.|.+.|++.+=.++.+- +...+-+. +++..++. ..++ ....+.. ...+ .+..
T Consensus 17 ~~~~~sl~~~~~a~~~G~~~i~~T~H~~~~~~~~~~~~i~~~~~~l~~~~~~~----~~~i--~I~~G~Ev~~~~-~~~~ 89 (262)
T 3qy7_A 17 GDSADSIEMARAAVRQGIRTIIATPHHNNGVYKNEPAAVREAADQLNKRLIKE----DIPL--HVLPGQEIRIYG-EVEQ 89 (262)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEECCCBSEETTEECCHHHHHHHHHHHHHHHHHT----TCCC--EEECCCEEECCT-THHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHhc----CCCC--EEecCeEEecch-hHHH
Confidence 4668888999999999999998888752 22233332 23321110 1122 2222211 1222 2333
Q ss_pred HHHH-HHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEEecC------CCHHHH
Q 025159 107 ALQK-SLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGVSN------FSCKKL 179 (257)
Q Consensus 107 ~l~~-sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~------~~~~~l 179 (257)
.+++ ++-.|+ --|.+++..|.... ...+.+.+..+.+.|.+--||=-. .+.+.+
T Consensus 90 ~l~~~~~~~l~--~~~~vl~e~~~~~~-----------------~~~~~~~l~~i~~~g~v~ILAHPeRy~~~~~~~~~l 150 (262)
T 3qy7_A 90 DLAKRQLLSLN--DTKYILIEFPFDHV-----------------PRYAEQLFYDLQLKGYIPVIAHPERNREIRENPSLL 150 (262)
T ss_dssp HHHTTCSCCGG--GSSEEEEECCTTCC-----------------CTTHHHHHHHHHHTTCEEEEECGGGCHHHHHCTHHH
T ss_pred HHhcCCCcEEC--CceEEEEeCCCccC-----------------HHHHHHHHHHHHHCCCcEEEECCCccccccccHHHH
Confidence 3333 222222 22556776653221 234667888889999987776321 123456
Q ss_pred HHHHHhCCCCCceeccccCCCCC-----cHHHHHHHHHCCceEEEecCCCCCCCCCCCCCccChHHHHHHHHHhCCCc
Q 025159 180 GDILATAKIPPAANQVEMNPLWQ-----QNKLREFCKAKDIQLAAYAPLGARGTIWGSNRVMECEVLKEIAEAKGKTV 252 (257)
Q Consensus 180 ~~~~~~~~~~p~~~q~~~~~~~~-----~~~~~~~~~~~gi~v~~~~pl~~~G~l~~~~~~~~~~~~~~ia~~~~~s~ 252 (257)
.++.+.. . ..|++.+.+.. .......|.++|+.++.-|=..... .......+.+..+.+++|...
T Consensus 151 ~~l~~~G-~---~iEiN~~s~~g~~g~~~~~~~~~~~~~gl~~~igSDaH~~~----~r~~~~~~a~~~l~~~~G~~~ 220 (262)
T 3qy7_A 151 YHLVEKG-A---ASQITSGSLAGIFGKQLKAFSLRLVEANLIHFVASDAHNVK----TRNFHTQEALYVLEKEFGSEL 220 (262)
T ss_dssp HHHHHTT-C---EEEEEHHHHHTTTCHHHHHHHHHHHHTTCCCEEECCBCSSS----SSCCCHHHHHHHHHHHHCSHH
T ss_pred HHHHHCC-C---EEEEECCccCcccchHHHHHHHHHHhCCCeEEEEccCCCCC----CCCchHHHHHHHHHHHhCHHH
Confidence 6665543 3 45555544321 2456777888999887766443200 111122344455545577643
No 131
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=67.34 E-value=43 Score=29.86 Aligned_cols=118 Identities=14% Similarity=0.077 Sum_probs=75.2
Q ss_pred hhhHHHHHHHHHH----hhCCC-cccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEEecCCC
Q 025159 101 RELVVPALQKSLE----NLQLE-YIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGVSNFS 175 (257)
Q Consensus 101 ~~~i~~~l~~sL~----~Lg~d-~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~ 175 (257)
.+++...++..-. +.|-. .+|++.|+.-.. +.+......+.+++. -=--+-+.+++
T Consensus 104 e~~~~~~~~~~~~~~~~rvg~~~~~D~ial~~~s~------------------dpe~~~~vVk~V~e~-~dvPL~IDS~d 164 (446)
T 4djd_C 104 SEELKAKVEAINGLNFDRVGQHYTIQAIAIRHDAD------------------DPAAFKAAVASVAAA-TQLNLVLMADD 164 (446)
T ss_dssp HHHHHHHHHHHTTCCEEETTEEECCCEEEEECCSS------------------STHHHHHHHHHHHTT-CCSEEEEECSC
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCcEEEEEeCCC------------------CHHHHHHHHHHHHHh-CCCCEEEecCC
Confidence 3455555554421 22312 689999987532 134444444454443 22357888999
Q ss_pred HHHHHHHHHhC-CCCCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCCCCCCCCccChHHHHHHHHHhCCC
Q 025159 176 CKKLGDILATA-KIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTIWGSNRVMECEVLKEIAEAKGKT 251 (257)
Q Consensus 176 ~~~l~~~~~~~-~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~l~~~~~~~~~~~~~~ia~~~~~s 251 (257)
++.+++.++.+ +.+|.++-... ..-+.+.+.+.++|.+++++++ . ...-..+.+.+.++|+.
T Consensus 165 pevleaALea~a~~~plI~sat~---dn~e~m~~lAa~y~~pVi~~~~--d---------l~~lkelv~~a~~~GI~ 227 (446)
T 4djd_C 165 PDVLKEALAGVADRKPLLYAATG---ANYEAMTALAKENNCPLAVYGN--G---------LEELAELVDKIVALGHK 227 (446)
T ss_dssp HHHHHHHHGGGGGGCCEEEEECT---TTHHHHHHHHHHTTCCEEEECS--S---------HHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhhcCcCCeeEecch---hhHHHHHHHHHHcCCcEEEEec--c---------HHHHHHHHHHHHHCCCC
Confidence 99999999987 46676765431 1224799999999999999976 1 12236677778888873
No 132
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=67.16 E-value=66 Score=28.26 Aligned_cols=151 Identities=14% Similarity=0.122 Sum_probs=90.3
Q ss_pred CChhHHHHHHHHHHHcCCceeeC--CC-----CCCC----------------------------hHHHHHHHHHHHhCCC
Q 025159 37 SGSETTKLAILEAMKLGYRHFDT--AT-----LYQT----------------------------EQPLGDAIAEALSTGI 81 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~Gi~~~Dt--A~-----~Yg~----------------------------e~~lg~~l~~~~~~~~ 81 (257)
.+.++..+.++.+++.|++.|=. .. .||. ....=+++|+.+ |
T Consensus 148 ~~~e~~~~~a~~~~~~Gf~~iKlKvG~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~avR~av--G- 224 (424)
T 3v3w_A 148 KDLDSTLEAVRKAKDKGYKAIRVQCGIPGIAKTYGVSTNTKSYEPADADLPSVEVWSTEKYLNYIPDVFAAVRKEF--G- 224 (424)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCC-----CCSCCBSSCCEEEECHHHHHHHHHHHHHHHHHHH--C-
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHc--C-
Confidence 36788888899999999997632 10 1210 011123455442 2
Q ss_pred CCCCCcEEEEeccCCCCCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHH
Q 025159 82 IKSRDELFIASKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQ 161 (257)
Q Consensus 82 ~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 161 (257)
+++-|...... .++.+...+ +-+.|+.++++ +++.|... +-++.+.+++
T Consensus 225 ----~d~~l~vDaN~-~~~~~~A~~-~~~~L~~~~i~-----~iEqP~~~--------------------~d~~~~~~l~ 273 (424)
T 3v3w_A 225 ----PDIHLLHDVHH-RLTPIEAAR-LGKALEPYHLF-----WMEDAVPA--------------------ENQESFKLIR 273 (424)
T ss_dssp ----SSSEEEEECTT-CCCHHHHHH-HHHHHGGGCCS-----EEECCSCC--------------------SSTTHHHHHH
T ss_pred ----CCCcEEEeCCC-CCCHHHHHH-HHHHHHhcCCC-----EEECCCCh--------------------HhHHHHHHHH
Confidence 34555555432 334443332 23456666544 45666321 1134566676
Q ss_pred HcCCee-EEEecCCCHHHHHHHHHhCCCCCceeccccCCCCC---cHHHHHHHHHCCceEEEecCC
Q 025159 162 NLGYTK-AIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQ---QNKLREFCKAKDIQLAAYAPL 223 (257)
Q Consensus 162 ~~G~ir-~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~---~~~~~~~~~~~gi~v~~~~pl 223 (257)
+.-.|- ..|=+-+++..+.++++...++ ++|...+-+.- -..+.+.|+++|+.++.+++.
T Consensus 274 ~~~~iPIa~dE~~~~~~~~~~~i~~ga~d--~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 337 (424)
T 3v3w_A 274 QHTTTPLAVGEVFNSIHDCRELIQNQWID--YIRTTIVHAGGISQMRRIADFASLFHVRTGFHGAT 337 (424)
T ss_dssp HHCCSCEEECTTCCSGGGTHHHHHTTCCS--EECCCTTTTTHHHHHHHHHHHHHTTTCEEEECCCT
T ss_pred hhCCCCEEEccCcCCHHHHHHHHHcCCCC--eEeecchhcCCHHHHHHHHHHHHHcCCEEEecCCC
Confidence 655553 4455667888999998876655 77777655432 267899999999999988875
No 133
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=66.11 E-value=51 Score=28.57 Aligned_cols=151 Identities=12% Similarity=0.079 Sum_probs=89.4
Q ss_pred CChhHHHHHHHHHHHc---CCceeeCCCCCC---ChHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHH
Q 025159 37 SGSETTKLAILEAMKL---GYRHFDTATLYQ---TEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQK 110 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~---Gi~~~DtA~~Yg---~e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~ 110 (257)
.+.++..+.++.+++. |++.|-.--... .+...=+++|+.+ | +++-|...... .++++...+ +-+
T Consensus 170 ~~~e~~~~~a~~~~~~~~~G~~~iKlKvG~~~~~~d~~~v~avR~a~--G-----~~~~l~vDaN~-~~~~~~A~~-~~~ 240 (390)
T 3ugv_A 170 SPAEVAAEAVELKAEGQGTGFKGLKLRMGRDDPAVDIETAEAVWDAV--G-----RDTALMVDFNQ-GLDMAEAMH-RTR 240 (390)
T ss_dssp CHHHHHHHHHHHHHTTCTTCCSEEEEECCCSSHHHHHHHHHHHHHHH--C-----TTSEEEEECTT-CCCHHHHHH-HHH
T ss_pred CCHHHHHHHHHHHHHhhhCCCcEEEEecCCCCHHHHHHHHHHHHHHh--C-----CCCEEEEECCC-CCCHHHHHH-HHH
Confidence 3667778888888888 999875433221 1222233455542 2 44555555432 334433222 223
Q ss_pred HHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe-eEEEecCCCHHHHHHHHHhCCCC
Q 025159 111 SLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT-KAIGVSNFSCKKLGDILATAKIP 189 (257)
Q Consensus 111 sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~ 189 (257)
.|+.+ ++.++..|... +-++.+.++++.-.| -..|=+-+++..+.++++...++
T Consensus 241 ~l~~~-----~i~~iEqP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d 295 (390)
T 3ugv_A 241 QIDDL-----GLEWIEEPVVY--------------------DNFDGYAQLRHDLKTPLMIGENFYGPREMHQALQAGACD 295 (390)
T ss_dssp HHTTS-----CCSEEECCSCT--------------------TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCS
T ss_pred HHHhh-----CCCEEECCCCc--------------------ccHHHHHHHHHhcCCCEEeCCCcCCHHHHHHHHHcCCCC
Confidence 34444 45566666431 124566677765444 35566788999999998876655
Q ss_pred CceeccccCCCC---CcHHHHHHHHHCCceEEEecCC
Q 025159 190 PAANQVEMNPLW---QQNKLREFCKAKDIQLAAYAPL 223 (257)
Q Consensus 190 p~~~q~~~~~~~---~~~~~~~~~~~~gi~v~~~~pl 223 (257)
++|....-+. .-..+.+.|+++|+.++..+.+
T Consensus 296 --~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~h~~~ 330 (390)
T 3ugv_A 296 --LVMPDFMRIGGVSGWMRAAGVAGAWGIPMSTHLYP 330 (390)
T ss_dssp --EECCBHHHHTHHHHHHHHHHHHHHHTCCBCCBSCH
T ss_pred --EEEeCccccCCHHHHHHHHHHHHHcCCEEeecCHH
Confidence 6766654322 1257899999999999876543
No 134
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=65.95 E-value=64 Score=28.58 Aligned_cols=94 Identities=9% Similarity=0.068 Sum_probs=63.8
Q ss_pred ChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEEecC--CCHH
Q 025159 100 HRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGVSN--FSCK 177 (257)
Q Consensus 100 ~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~--~~~~ 177 (257)
+++...+.+.+.++.+ ++++|..|... +-|+.+.+|.+..+|.-+|=-. ++++
T Consensus 271 t~~e~~~~~~~ll~~y-----~i~~IEdPl~~--------------------dD~~g~~~L~~~~~ipI~gDE~~vt~~~ 325 (439)
T 2akz_A 271 TGDQLGALYQDFVRDY-----PVVSIEDPFDQ--------------------DDWAAWSKFTANVGIQIVGDDLTVTNPK 325 (439)
T ss_dssp CHHHHHHHHHHHHHHS-----CEEEEECCSCT--------------------TCHHHHHHHHHTCSSEEEESTTTTTCHH
T ss_pred CHHHHHHHHHHHHHhC-----CCcEEECCCCc--------------------ccHHHHHHHHhCCCCEEEeCCCccCCHH
Confidence 4444455555555543 68899998542 2277788888888887666443 4899
Q ss_pred HHHHHHHhCCCCCceeccccCCCCC---cHHHHHHHHHCCceEEEe
Q 025159 178 KLGDILATAKIPPAANQVEMNPLWQ---QNKLREFCKAKDIQLAAY 220 (257)
Q Consensus 178 ~l~~~~~~~~~~p~~~q~~~~~~~~---~~~~~~~~~~~gi~v~~~ 220 (257)
.+.++++....+ ++|+..+-+.. ..++.+.|+++|+.++..
T Consensus 326 ~~~~~i~~~a~d--~i~iKv~qiGGitea~~ia~lA~~~g~~~~~s 369 (439)
T 2akz_A 326 RIERAVEEKACN--CLLLKVNQIGSVTEAIQACKLAQENGWGVMVS 369 (439)
T ss_dssp HHHHHHHTTCCS--EEEECHHHHCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHhCCCC--EEEechhhcCCHHHHHHHHHHHHHCCCeEEee
Confidence 999998876655 66665543322 357899999999997653
No 135
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=65.04 E-value=39 Score=29.26 Aligned_cols=127 Identities=10% Similarity=0.087 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHcCCceeeCC-------------------CCCC-C----hHHHHHHHHHHHhCCCCCCCCcEEEEeccCC
Q 025159 41 TTKLAILEAMKLGYRHFDTA-------------------TLYQ-T----EQPLGDAIAEALSTGIIKSRDELFIASKLWC 96 (257)
Q Consensus 41 ~~~~~l~~Al~~Gi~~~DtA-------------------~~Yg-~----e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~ 96 (257)
+..+..+.|.++|+..++.- +.|| + -+++-+.++...+. --++ -|..|+..
T Consensus 168 ~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~a----vg~~-~V~vrls~ 242 (376)
T 1icp_A 168 EFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANE----IGSD-RVGIRISP 242 (376)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHH----HCGG-GEEEEECT
T ss_pred HHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHH----hcCC-ceEEEecc
Confidence 34455567788999988742 3355 2 12233333322111 1123 46668754
Q ss_pred CCC-------ChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEE
Q 025159 97 SDA-------HRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAI 169 (257)
Q Consensus 97 ~~~-------~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~i 169 (257)
.+. .....-..+-+.|+..|+++|+ +|....... .+ . ...|+.+.++++.=.+--|
T Consensus 243 ~~~~~g~~~~~~~~~~~~la~~le~~Gvd~i~---v~~~~~~~~----~~-~---------~~~~~~~~~vr~~~~iPvi 305 (376)
T 1icp_A 243 FAHYNEAGDTNPTALGLYMVESLNKYDLAYCH---VVEPRMKTA----WE-K---------IECTESLVPMRKAYKGTFI 305 (376)
T ss_dssp TCCTTTCCCSCHHHHHHHHHHHHGGGCCSEEE---EECCSCCC--------------------CCCCSHHHHHHCCSCEE
T ss_pred ccccCCCCCCCCHHHHHHHHHHHHHcCCCEEE---EcCCcccCC----CC-c---------cccHHHHHHHHHHcCCCEE
Confidence 321 1112234556677888866554 454422110 00 0 0112333445554455668
Q ss_pred EecCCCHHHHHHHHHhCCCC
Q 025159 170 GVSNFSCKKLGDILATAKIP 189 (257)
Q Consensus 170 Gvs~~~~~~l~~~~~~~~~~ 189 (257)
+...++++..+++++....+
T Consensus 306 ~~G~i~~~~a~~~l~~g~aD 325 (376)
T 1icp_A 306 VAGGYDREDGNRALIEDRAD 325 (376)
T ss_dssp EESSCCHHHHHHHHHTTSCS
T ss_pred EeCCCCHHHHHHHHHCCCCc
Confidence 88888999999999876655
No 136
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=64.52 E-value=74 Score=27.92 Aligned_cols=151 Identities=14% Similarity=0.102 Sum_probs=90.3
Q ss_pred CChhHHHHHHHHHHHcCCceeeC--C-----CCCC----------------------------ChHHHHHHHHHHHhCCC
Q 025159 37 SGSETTKLAILEAMKLGYRHFDT--A-----TLYQ----------------------------TEQPLGDAIAEALSTGI 81 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~Gi~~~Dt--A-----~~Yg----------------------------~e~~lg~~l~~~~~~~~ 81 (257)
.+.++..+.++.+++.|++.|=. . ..|| .....=+++|+.+ +
T Consensus 149 ~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~avR~a~--G- 225 (425)
T 3vcn_A 149 ETIEDTIAEAVKYKAMGYKAIRLQTGVPGLASTYGVSKDKMFYEPADNDLPTENIWSTAKYLNSVPKLFERAREVL--G- 225 (425)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCSSCSSCCCCCCBSSCCEEEECHHHHHTTTHHHHHHHHHHH--C-
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeecCccccccccccccccccCcccccccccccccchhHHHHHHHHHHHHHHHc--C-
Confidence 36788888899999999997631 1 0121 1122234555552 2
Q ss_pred CCCCCcEEEEeccCCCCCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHH
Q 025159 82 IKSRDELFIASKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQ 161 (257)
Q Consensus 82 ~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 161 (257)
+++-|..... ..++.+...+ +-+.|+.++++ +++.|... +-++.+.+++
T Consensus 226 ----~d~~l~vDaN-~~~~~~~A~~-~~~~L~~~~i~-----~iEqP~~~--------------------~d~~~~~~l~ 274 (425)
T 3vcn_A 226 ----WDVHLLHDVH-HRLTPIEAAR-LGKDLEPYRLF-----WLEDSVPA--------------------ENQAGFRLIR 274 (425)
T ss_dssp ----SSSEEEEECT-TCCCHHHHHH-HHHHHGGGCCS-----EEECCSCC--------------------SSTTHHHHHH
T ss_pred ----CCCEEEEECC-CCCCHHHHHH-HHHHHHhcCCC-----EEECCCCh--------------------hhHHHHHHHH
Confidence 3445555543 2344443332 33456666544 45666321 1134566676
Q ss_pred HcCCee-EEEecCCCHHHHHHHHHhCCCCCceeccccCCCCC---cHHHHHHHHHCCceEEEecCC
Q 025159 162 NLGYTK-AIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQ---QNKLREFCKAKDIQLAAYAPL 223 (257)
Q Consensus 162 ~~G~ir-~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~---~~~~~~~~~~~gi~v~~~~pl 223 (257)
+.-.|- ..|=+-+++..+.++++...++ ++|....-+.- -..+.+.|+++|+.++.++..
T Consensus 275 ~~~~iPIa~dE~~~~~~~~~~~i~~~a~d--~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~ 338 (425)
T 3vcn_A 275 QHTTTPLAVGEIFAHVWDAKQLIEEQLID--YLRATVLHAGGITNLKKIAAFADLHHVKTGCHGAT 338 (425)
T ss_dssp HHCCSCEEECTTCCSGGGTHHHHHTTCCS--EECCCTTTTTHHHHHHHHHHHHGGGTCEECCCCCT
T ss_pred hcCCCCEEeCCCcCCHHHHHHHHHcCCCC--eEecChhhcCCHHHHHHHHHHHHHcCCEEeeccCC
Confidence 655553 3455667888999998876655 77777654432 267899999999999888764
No 137
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=64.48 E-value=17 Score=25.01 Aligned_cols=61 Identities=11% Similarity=0.120 Sum_probs=43.5
Q ss_pred HHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEe
Q 025159 153 VWEAMEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAY 220 (257)
Q Consensus 153 ~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~ 220 (257)
+-..|.-..+.|++. .|. .+..+.++.......+.-.+. +-+....+..+|++++|+++.|
T Consensus 3 i~~~L~la~kagk~v-~G~-----~~v~kai~~gka~lViiA~D~-~~~~~~~i~~~c~~~~ip~~~~ 63 (99)
T 3j21_Z 3 LAFELRKAMETGKVV-LGS-----NETIRLAKTGGAKLIIVAKNA-PKEIKDDIYYYAKLSDIPVYEF 63 (99)
T ss_dssp HHHHHHHHHHSSCEE-ESH-----HHHHHHHHHTCCSEEEEECCC-CHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHhCCEe-ECH-----HHHHHHHHcCCccEEEEeCCC-CHHHHHHHHHHHHHcCCCEEEe
Confidence 446677788889874 565 677788888777766665552 2222367889999999998776
No 138
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=63.72 E-value=75 Score=27.73 Aligned_cols=151 Identities=15% Similarity=0.170 Sum_probs=91.6
Q ss_pred ChhHHHHHHHHHHHcCCceeeCCCCC-C-------------------ChHHHH------HHHHHHHhCCCCCCCCcEEEE
Q 025159 38 GSETTKLAILEAMKLGYRHFDTATLY-Q-------------------TEQPLG------DAIAEALSTGIIKSRDELFIA 91 (257)
Q Consensus 38 ~~~~~~~~l~~Al~~Gi~~~DtA~~Y-g-------------------~e~~lg------~~l~~~~~~~~~~~R~~l~i~ 91 (257)
+.++..+.++.+++.|++.|=.-... + ....+. +++|+.+ | +++.|.
T Consensus 153 ~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR~a~--G-----~~~~l~ 225 (421)
T 4hnl_A 153 NLDDLYHEIDRFLAAGYRYIRCQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLKMFAAIKEKY--G-----NQFQML 225 (421)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHH--T-----TSSEEE
T ss_pred CHHHHHHHHHHHHHhhHHHHhhccccccCCchhccccccccccccccchhHHHHHHHHHHHHHHHh--C-----CCceEe
Confidence 67888888999999999977432110 0 011121 2344431 2 445555
Q ss_pred eccCCCCCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe-eEEE
Q 025159 92 SKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT-KAIG 170 (257)
Q Consensus 92 tK~~~~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iG 170 (257)
.-... .++++...+- -+.|+. .+++++..|.. .+-++.+.+|+++-.| -..|
T Consensus 226 vDan~-~~~~~~A~~~-~~~l~~-----~~i~~iEeP~~--------------------~~d~~~~~~l~~~~~ipIa~d 278 (421)
T 4hnl_A 226 HDVHE-RLHPNQAIQF-AKAAEP-----YQLFFLEDILP--------------------PDQSHWLTQLRSQSATPIATG 278 (421)
T ss_dssp EECTT-CSCHHHHHHH-HHHHGG-----GCCSEEECCSC--------------------GGGGGGHHHHHTTCCCCEEEC
T ss_pred ccccc-cCCHHHHHHH-HHHhhh-----hhhcccccCCc--------------------ccchHHHHHHHhcCCCCeecC
Confidence 55433 2344433332 223333 46677887743 1235667778776555 3556
Q ss_pred ecCCCHHHHHHHHHhCCCCCceeccccCCCCC---cHHHHHHHHHCCceEEEecCCC
Q 025159 171 VSNFSCKKLGDILATAKIPPAANQVEMNPLWQ---QNKLREFCKAKDIQLAAYAPLG 224 (257)
Q Consensus 171 vs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~---~~~~~~~~~~~gi~v~~~~pl~ 224 (257)
=+-++...+.++++...++ ++|...+-+.- -..+.+.|+++|+.+..+++..
T Consensus 279 E~~~~~~~~~~~i~~~a~d--~v~~d~~~~GGite~~~ia~~A~~~gi~v~~h~~~~ 333 (421)
T 4hnl_A 279 ELFNNPMEWQELVKNRQID--FMRAHVSQIGGITPALKLAHFCDAMGVRIAWHTPSD 333 (421)
T ss_dssp TTCCSGGGTHHHHHTTCCS--EECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCCSS
T ss_pred cceehhHHHHHHHhcCCce--EEEeCCCCCCCHHHHHHHHHHHHHCCCeEEEeCCcc
Confidence 7778899999998876655 77766654322 3678999999999998876653
No 139
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=63.70 E-value=43 Score=29.81 Aligned_cols=111 Identities=9% Similarity=0.081 Sum_probs=64.8
Q ss_pred CCCChHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHhhCCC-----cccEEEeecCCCCCCCCC
Q 025159 62 LYQTEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLENLQLE-----YIDLYVIHWPVSSKPGSY 136 (257)
Q Consensus 62 ~Yg~e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~Lg~d-----~lDl~~lh~p~~~~~~~~ 136 (257)
.+|.++.+-++|++.++.. +-+-++|.|-+-. +-|-..++..++++.-. -+.++.+|.|.....
T Consensus 73 VfGg~~~L~~~I~~~~~~~---~P~~I~V~tTC~~-----e~IGdDi~~v~~~~~~~~~~~~~~pVi~v~tpgf~gs--- 141 (458)
T 3pdi_B 73 VMGADENVVEALKTICERQ---NPSVIGLLTTGLS-----ETQGCDLHTALHEFRTQYEEYKDVPIVPVNTPDFSGC--- 141 (458)
T ss_dssp SSCSHHHHHHHHHHHHHHT---CCSEEEEEECHHH-----HTTCTTHHHHHHHTTTSCCSCSCSCEEEECCCTTSSC---
T ss_pred ccCcHHHHHHHHHHHHHhc---CCCEEEEECCcHH-----HHhcCCHHHHHHHHHHhccccCCCeEEEeeCCCcCCc---
Confidence 3677888888888876554 3466777777632 22222344455555443 367899998855311
Q ss_pred CCCCcccCCCCccHHHHHHHHHH-HHH---------cCCeeEE-EecCC--CHHHHHHHHHhCCCCCce
Q 025159 137 EFPIKKEDFLPMDFKSVWEAMEE-CQN---------LGYTKAI-GVSNF--SCKKLGDILATAKIPPAA 192 (257)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~l~~-l~~---------~G~ir~i-Gvs~~--~~~~l~~~~~~~~~~p~~ 192 (257)
.......++++|-+ +.+ .++|--| |..++ +.+++.++++..++.+.+
T Consensus 142 ---------~~~G~~~a~~al~~~l~~~~~~~~~~~~~~VNii~G~~~~~~D~~eik~lL~~~Gi~v~~ 201 (458)
T 3pdi_B 142 ---------FESGFAAAVKAIVETLVPERRDQVGKRPRQVNVLCSANLTPGDLEYIAESIESFGLRPLL 201 (458)
T ss_dssp ---------HHHHHHHHHHHHHHHSSCSSSCTTCCCSSEEEEEECTTCCHHHHHHHHHHHHTTTCEEEE
T ss_pred ---------hhHHHHHHHHHHHHHhhccccCcCCCCCCeEEEEeCCCCChHHHHHHHHHHHHcCCEEEE
Confidence 01123344454443 221 3467778 76544 356788889988876433
No 140
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=63.32 E-value=45 Score=28.38 Aligned_cols=105 Identities=12% Similarity=0.105 Sum_probs=55.0
Q ss_pred hHHHHHHHHHHhhCCCcccEEEee-cCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHc-CCeeEEEec--CC-CHH
Q 025159 103 LVVPALQKSLENLQLEYIDLYVIH-WPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNL-GYTKAIGVS--NF-SCK 177 (257)
Q Consensus 103 ~i~~~l~~sL~~Lg~d~lDl~~lh-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-G~ir~iGvs--~~-~~~ 177 (257)
.-...+-+.|.++|+++|.+=+.. ||... +. ..+ .....|+.++.+++. ..++...++ +. ..+
T Consensus 30 e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ss-p~-~g~----------~~~~~~e~l~~i~~~~~~~~i~~l~~p~~~~~~ 97 (345)
T 1nvm_A 30 DDVRAIARALDKAKVDSIEVAHGDGLQGSS-FN-YGF----------GRHTDLEYIEAVAGEISHAQIATLLLPGIGSVH 97 (345)
T ss_dssp HHHHHHHHHHHHHTCSEEECSCTTSTTCCB-TT-TBC----------CSSCHHHHHHHHHTTCSSSEEEEEECBTTBCHH
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCCCCCCC-Cc-ccC----------CCCCHHHHHHHHHhhCCCCEEEEEecCCcccHH
Confidence 344556667788998777662110 33211 00 000 012345566666554 244545442 22 356
Q ss_pred HHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEe
Q 025159 178 KLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAY 220 (257)
Q Consensus 178 ~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~ 220 (257)
.++++.+. +++-..+-.+.|-...-.+.+++|+++|+.+...
T Consensus 98 ~i~~a~~a-Gvd~v~I~~~~s~~~~~~~~i~~ak~~G~~v~~~ 139 (345)
T 1nvm_A 98 DLKNAYQA-GARVVRVATHCTEADVSKQHIEYARNLGMDTVGF 139 (345)
T ss_dssp HHHHHHHH-TCCEEEEEEETTCGGGGHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHhC-CcCEEEEEEeccHHHHHHHHHHHHHHCCCEEEEE
Confidence 67776654 4553222233333333478999999999988765
No 141
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=62.39 E-value=74 Score=27.20 Aligned_cols=151 Identities=11% Similarity=0.086 Sum_probs=87.1
Q ss_pred hhHHHHHHHHHHH-cCCceeeCCCCCC-C--hHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHh
Q 025159 39 SETTKLAILEAMK-LGYRHFDTATLYQ-T--EQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLEN 114 (257)
Q Consensus 39 ~~~~~~~l~~Al~-~Gi~~~DtA~~Yg-~--e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~ 114 (257)
.++..+....+++ .|++.|-.--... . ....=+++|+.+ -+++-|...... .++++...+ +-+.|+.
T Consensus 143 ~~~~~~~~~~~~~~~G~~~~KiKvg~~~~~~d~~~v~avR~~~-------g~~~~l~vDan~-~~~~~~a~~-~~~~l~~ 213 (370)
T 1chr_A 143 TKRDLDSAVEMIERRRHNRFKVKLGFRSPQDDLIHMEALSNSL-------GSKAYLRVDVNQ-AWDEQVASV-YIPELEA 213 (370)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEECSSSCSHHHHHHHHHHHHHS-------STTCCEEEECTT-CCCTTHHHH-HTHHHHT
T ss_pred cHHHHHHHHHHHHHCCCCEEEEecCCCCHHHHHHHHHHHHHhc-------CCCCEEEEECCC-CCCHHHHHH-HHHHHHh
Confidence 3443344455555 8999876432221 1 222234566551 234445555432 233333222 2334444
Q ss_pred hCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe-eEEEecCCCHHHHHHHHHhCCCCCcee
Q 025159 115 LQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT-KAIGVSNFSCKKLGDILATAKIPPAAN 193 (257)
Q Consensus 115 Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~p~~~ 193 (257)
+ ++.++..|... +-++.+.++++.-.| -..|=+-++...+.++++...++ ++
T Consensus 214 ~-----~i~~iEqP~~~--------------------~~~~~~~~l~~~~~iPia~dE~~~~~~~~~~~~~~~~~d--~v 266 (370)
T 1chr_A 214 L-----GVELIEQPVGR--------------------ENTQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVD--VF 266 (370)
T ss_dssp T-----TEEEEECCSCT--------------------TCHHHHHHHHHHSCSEEEESSSCCSHHHHHHHHTTTSCS--EE
T ss_pred c-----CCCEEECCCCc--------------------ccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCC--EE
Confidence 4 45667776421 125667777775544 34466678899999998866555 77
Q ss_pred ccccCCCCC---cHHHHHHHHHCCceEEEecCCCC
Q 025159 194 QVEMNPLWQ---QNKLREFCKAKDIQLAAYAPLGA 225 (257)
Q Consensus 194 q~~~~~~~~---~~~~~~~~~~~gi~v~~~~pl~~ 225 (257)
|...+-+.- -..+.+.|+++|+.++..+.+.+
T Consensus 267 ~~k~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es 301 (370)
T 1chr_A 267 SLKLCNMGGVSATQKIAAVAEASGIASYGGTMLDS 301 (370)
T ss_dssp EECTTTSCSHHHHHHHHHHHHHHTCEEEECCSCCT
T ss_pred EECccccCCHHHHHHHHHHHHHcCCeEEecCCCcc
Confidence 777655432 36789999999999998776643
No 142
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=62.07 E-value=57 Score=27.32 Aligned_cols=86 Identities=8% Similarity=0.062 Sum_probs=60.0
Q ss_pred HHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCC--------------CceeccccCCCCCcHHHHHHHHHCCceEEEecC
Q 025159 157 MEECQNLGYTKAIGVSNFSCKKLGDILATAKIP--------------PAANQVEMNPLWQQNKLREFCKAKDIQLAAYAP 222 (257)
Q Consensus 157 l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~--------------p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~p 222 (257)
+..+.+...++-++|++-+++..+++.+..+++ ++++-+ .+|-....++...|-++|+.|+.=.|
T Consensus 40 ~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I-~tP~~~H~~~~~~al~aGkhVl~EKP 118 (350)
T 4had_A 40 VPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLASDVIDAVYI-PLPTSQHIEWSIKAADAGKHVVCEKP 118 (350)
T ss_dssp HHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEE-CSCGGGHHHHHHHHHHTTCEEEECSC
T ss_pred HHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEE-eCCCchhHHHHHHHHhcCCEEEEeCC
Confidence 455666777888999999998888876655432 111110 11111225788888899999999999
Q ss_pred CCCCCCCCCCCCccChHHHHHHHHHhCCC
Q 025159 223 LGARGTIWGSNRVMECEVLKEIAEAKGKT 251 (257)
Q Consensus 223 l~~~G~l~~~~~~~~~~~~~~ia~~~~~s 251 (257)
++. ++.....+.+.|++.|+.
T Consensus 119 la~--------~~~ea~~l~~~a~~~~~~ 139 (350)
T 4had_A 119 LAL--------KAGDIDAVIAARDRNKVV 139 (350)
T ss_dssp CCS--------SGGGGHHHHHHHHHHTCC
T ss_pred ccc--------chhhHHHHHHHHHHcCCc
Confidence 986 455678888889888864
No 143
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=62.05 E-value=63 Score=26.31 Aligned_cols=130 Identities=12% Similarity=0.111 Sum_probs=72.2
Q ss_pred CCCceecCCCCCcCCccceeCCcCCCCChhHHHHHHHHHHHcCCceeeCCCCC----CChHHHHHHHHHHHhCCCCCCCC
Q 025159 11 SIPDVPLKSSNRRMPVLGLGTAASPFSGSETTKLAILEAMKLGYRHFDTATLY----QTEQPLGDAIAEALSTGIIKSRD 86 (257)
Q Consensus 11 ~m~~~~l~~~~~~vs~lglG~~~~~~~~~~~~~~~l~~Al~~Gi~~~DtA~~Y----g~e~~lg~~l~~~~~~~~~~~R~ 86 (257)
.++-..+|.| .|+||.-... .+.++..+-++.+.+.|...++.=-.| .+...+...+..+...- ..-
T Consensus 9 ~v~~~~ig~g---~PkIcvpl~~---~t~~e~l~~a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~---~~l 79 (258)
T 4h3d_A 9 QVKNITIGEG---RPKICVPIIG---KNKKDIIKEAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYI---HDI 79 (258)
T ss_dssp EETTEEETSS---SCEEEEEECC---SSHHHHHHHHHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHC---TTS
T ss_pred EEcCEEeCCC---CCEEEEEeCC---CCHHHHHHHHHHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhc---CCC
Confidence 4566677777 6778766554 577888788888888898766433222 24566777666552111 112
Q ss_pred cEEEEecc----CCCCCChhhHHHHHHHHHHhhC-CCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHH
Q 025159 87 ELFIASKL----WCSDAHRELVVPALQKSLENLQ-LEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQ 161 (257)
Q Consensus 87 ~l~i~tK~----~~~~~~~~~i~~~l~~sL~~Lg-~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 161 (257)
-+.++.+. +....+.+. +..+-..+...+ +||+|+=+-. + ++..+.+.+..
T Consensus 80 PiI~T~Rt~~EGG~~~~~~~~-~~~ll~~~~~~~~~d~iDvEl~~-~----------------------~~~~~~l~~~a 135 (258)
T 4h3d_A 80 PLLFTFRSVVEGGEKLISRDY-YTTLNKEISNTGLVDLIDVELFM-G----------------------DEVIDEVVNFA 135 (258)
T ss_dssp CEEEECCCGGGTCSCCCCHHH-HHHHHHHHHHTTCCSEEEEEGGG-C----------------------HHHHHHHHHHH
T ss_pred CEEEEEechhhCCCCCCCHHH-HHHHHHHHHhcCCchhhHHhhhc-c----------------------HHHHHHHHHHH
Confidence 35555554 112233333 333333444444 8899875522 1 34556666655
Q ss_pred HcCCeeEEEecCC
Q 025159 162 NLGYTKAIGVSNF 174 (257)
Q Consensus 162 ~~G~ir~iGvs~~ 174 (257)
+++.++-| +|.|
T Consensus 136 ~~~~~kiI-~S~H 147 (258)
T 4h3d_A 136 HKKEVKVI-ISNH 147 (258)
T ss_dssp HHTTCEEE-EEEE
T ss_pred HhCCCEEE-EEEe
Confidence 56666655 3444
No 144
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=62.00 E-value=68 Score=27.47 Aligned_cols=136 Identities=10% Similarity=0.073 Sum_probs=67.8
Q ss_pred CChhHHHHHH-------HHHHHcCCceeeCC-------------------CCCC-C----hHHHHHHHHHHHhCCCCCCC
Q 025159 37 SGSETTKLAI-------LEAMKLGYRHFDTA-------------------TLYQ-T----EQPLGDAIAEALSTGIIKSR 85 (257)
Q Consensus 37 ~~~~~~~~~l-------~~Al~~Gi~~~DtA-------------------~~Yg-~----e~~lg~~l~~~~~~~~~~~R 85 (257)
.+.++..+++ +.|.++|+..++.- +.|| + -+++-+.++...+ . --
T Consensus 148 mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~-a---vg 223 (363)
T 3l5l_A 148 MTLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVRE-V---WP 223 (363)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHT-T---SC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHH-H---cC
Confidence 5566655444 44668899877643 2355 3 2234444544421 1 12
Q ss_pred CcEEEEeccCCCCCCh---hhHH--HHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHH
Q 025159 86 DELFIASKLWCSDAHR---ELVV--PALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEEC 160 (257)
Q Consensus 86 ~~l~i~tK~~~~~~~~---~~i~--~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 160 (257)
+++-|..|+.+.++.. ..+. ..+-+.|+..|+|||++ |....... ...|. ... ..++....+
T Consensus 224 ~d~pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~v---s~g~~~~~--~~~~~-----~~~---~~~~~~~~i 290 (363)
T 3l5l_A 224 ENLPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSV---SVGFTIPD--TNIPW-----GPA---FMGPIAERV 290 (363)
T ss_dssp TTSCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEE---EECCCSSC--CCCCC-----CTT---TTHHHHHHH
T ss_pred CCceEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEE---ecCccccc--cccCC-----Ccc---hhHHHHHHH
Confidence 4556778875433211 1122 23445677788776665 43211100 00000 000 112333444
Q ss_pred HHcCCeeEEEecCC-CHHHHHHHHHhCCCC
Q 025159 161 QNLGYTKAIGVSNF-SCKKLGDILATAKIP 189 (257)
Q Consensus 161 ~~~G~ir~iGvs~~-~~~~l~~~~~~~~~~ 189 (257)
++.=.+--|++..+ +++..+++++....+
T Consensus 291 r~~~~iPVi~~GgI~s~e~a~~~l~~G~aD 320 (363)
T 3l5l_A 291 RREAKLPVTSAWGFGTPQLAEAALQANQLD 320 (363)
T ss_dssp HHHHTCCEEECSSTTSHHHHHHHHHTTSCS
T ss_pred HHHcCCcEEEeCCCCCHHHHHHHHHCCCcc
Confidence 44334666777776 688899988876544
No 145
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=61.75 E-value=41 Score=26.78 Aligned_cols=86 Identities=20% Similarity=0.289 Sum_probs=51.2
Q ss_pred HHHHHHHHHcCCeeEEEecC----------------CC---HHHHHHHHHhCCCCCceeccccCCCCC-cHHHHHHHHHC
Q 025159 154 WEAMEECQNLGYTKAIGVSN----------------FS---CKKLGDILATAKIPPAANQVEMNPLWQ-QNKLREFCKAK 213 (257)
Q Consensus 154 ~~~l~~l~~~G~ir~iGvs~----------------~~---~~~l~~~~~~~~~~p~~~q~~~~~~~~-~~~~~~~~~~~ 213 (257)
-++++.+++.|. ..|-+.. .+ ...+.++++..++.+......++.... -...++.|++.
T Consensus 25 ~~~l~~~~~~G~-~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~l 103 (262)
T 3p6l_A 25 TEALDKTQELGL-KYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGVYVAEKSSDWEKMFKFAKAM 103 (262)
T ss_dssp HHHHHHHHHTTC-CEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEEEECCSSTTHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCC-CEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEeccCCccHHHHHHHHHHHHHc
Confidence 355556666773 4555542 22 345666677777776555544432222 15788888888
Q ss_pred CceEEEecCCCCCCCCCCCCCccChHHHHHHHHHhCCC
Q 025159 214 DIQLAAYAPLGARGTIWGSNRVMECEVLKEIAEAKGKT 251 (257)
Q Consensus 214 gi~v~~~~pl~~~G~l~~~~~~~~~~~~~~ia~~~~~s 251 (257)
|+..+...|-. .....+.++|+++|++
T Consensus 104 Ga~~v~~~~~~-----------~~~~~l~~~a~~~gv~ 130 (262)
T 3p6l_A 104 DLEFITCEPAL-----------SDWDLVEKLSKQYNIK 130 (262)
T ss_dssp TCSEEEECCCG-----------GGHHHHHHHHHHHTCE
T ss_pred CCCEEEecCCH-----------HHHHHHHHHHHHhCCE
Confidence 88887765411 1236777788888764
No 146
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=61.45 E-value=78 Score=27.13 Aligned_cols=149 Identities=11% Similarity=0.050 Sum_probs=92.4
Q ss_pred CChhHHHHHHHHHHHc-CCceeeCCCCCCC---hHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHH
Q 025159 37 SGSETTKLAILEAMKL-GYRHFDTATLYQT---EQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSL 112 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~-Gi~~~DtA~~Yg~---e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL 112 (257)
.+.++..+..+.+++. |++.|-.--.... ....=+++|+. --+++-|...... .++.+.. .+.+
T Consensus 150 ~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~-------~g~~~~l~vDan~-~~~~~~a----~~~~ 217 (372)
T 3tj4_A 150 FTLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRER-------VDSAVRIAIDGNG-KWDLPTC----QRFC 217 (372)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEEECCCSSHHHHHHHHHHHHHH-------SCTTCEEEEECTT-CCCHHHH----HHHH
T ss_pred CCHHHHHHHHHHHHHccCCCEEEEcCCCCCHHHHHHHHHHHHHH-------cCCCCcEEeeCCC-CCCHHHH----HHHH
Confidence 3677888888888999 9998864332111 22223445554 1245566666532 3343332 2333
Q ss_pred HhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe-eEEEecCCCHHHHHHHHHhCCCCCc
Q 025159 113 ENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT-KAIGVSNFSCKKLGDILATAKIPPA 191 (257)
Q Consensus 113 ~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~p~ 191 (257)
+.|. ..++.++..|... +-++.+.+++++-.+ -..|=+-++++.+.++++...++
T Consensus 218 ~~l~--~~~i~~iEqP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d-- 273 (372)
T 3tj4_A 218 AAAK--DLDIYWFEEPLWY--------------------DDVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAVA-- 273 (372)
T ss_dssp HHTT--TSCEEEEESCSCT--------------------TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCS--
T ss_pred HHHh--hcCCCEEECCCCc--------------------hhHHHHHHHHhhcCCCEEeCCCccCHHHHHHHHHcCCCC--
Confidence 4443 3467788877431 125666777775444 34566778999999998876655
Q ss_pred eeccccCCCCC---cHHHHHHHHHCCceEEEec
Q 025159 192 ANQVEMNPLWQ---QNKLREFCKAKDIQLAAYA 221 (257)
Q Consensus 192 ~~q~~~~~~~~---~~~~~~~~~~~gi~v~~~~ 221 (257)
++|...+-+.- -..+.+.|+++|+.++.++
T Consensus 274 ~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~ 306 (372)
T 3tj4_A 274 YVQPDVTRLGGITEYIQVADLALAHRLPVVPHA 306 (372)
T ss_dssp EECCCTTTTTHHHHHHHHHHHHHHTTCCBCCCC
T ss_pred EEEeCccccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 77776654321 3678999999999998765
No 147
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=61.15 E-value=83 Score=27.81 Aligned_cols=94 Identities=11% Similarity=0.062 Sum_probs=62.7
Q ss_pred ChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEEecC--CCHH
Q 025159 100 HRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGVSN--FSCK 177 (257)
Q Consensus 100 ~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~--~~~~ 177 (257)
+++...+.+.+.++. .++++|..|... +-|+.+.+|.++.+|.-+|=-. .+++
T Consensus 274 t~~eai~~~~~~l~~-----y~i~~iEdPl~~--------------------dD~~g~~~l~~~~~ipI~gDE~~vt~~~ 328 (436)
T 2al1_A 274 TGPQLADLYHSLMKR-----YPIVSIEDPFAE--------------------DDWEAWSHFFKTAGIQIVADDLTVTNPK 328 (436)
T ss_dssp CHHHHHHHHHHHHHH-----SCEEEEECCSCT--------------------TCHHHHHHHHTTCCSEEEESTTTTTCHH
T ss_pred CHHHHHHHHHHHHHh-----CCcEEEECCCCC--------------------cCHHHHHHHHhcCCCeEEECCcccCCHH
Confidence 344444445555554 368899988542 2367778888888876666544 3799
Q ss_pred HHHHHHHhCCCCCceeccccCCCCC---cHHHHHHHHHCCceEEEe
Q 025159 178 KLGDILATAKIPPAANQVEMNPLWQ---QNKLREFCKAKDIQLAAY 220 (257)
Q Consensus 178 ~l~~~~~~~~~~p~~~q~~~~~~~~---~~~~~~~~~~~gi~v~~~ 220 (257)
.+.++++....+ ++|+..+-+.. ..++.+.|+++|+.++..
T Consensus 329 ~~~~~i~~~a~d--~i~ikv~qiGGitea~~ia~lA~~~g~~~~~s 372 (436)
T 2al1_A 329 RIATAIEKKAAD--ALLLKVNQIGTLSESIKAAQDSFAAGWGVMVS 372 (436)
T ss_dssp HHHHHHHTTCCS--EEEECHHHHCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHhCCCC--EEEechhhcCCHHHHHHHHHHHHHcCCeEEEe
Confidence 999998876655 56655543222 257899999999997653
No 148
>3l9c_A 3-dehydroquinate dehydratase; AROD, amino-acid biosynthesis, aromatic amino acid biosynthe schiff base, lyase; 1.60A {Streptococcus mutans}
Probab=60.99 E-value=67 Score=26.26 Aligned_cols=97 Identities=12% Similarity=0.024 Sum_probs=44.4
Q ss_pred ceecCCCCCcCCccceeCCcCCCCChhHHHHHHHHHHHcCCceeeCCCCCCCh---HHHHHHHHHHHhCCCCCCCCcEEE
Q 025159 14 DVPLKSSNRRMPVLGLGTAASPFSGSETTKLAILEAMKLGYRHFDTATLYQTE---QPLGDAIAEALSTGIIKSRDELFI 90 (257)
Q Consensus 14 ~~~l~~~~~~vs~lglG~~~~~~~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e---~~lg~~l~~~~~~~~~~~R~~l~i 90 (257)
...+|.+ .|+||.=... .+.+++. .+..+...|...++.=-.|-.. ..+...+.+. . ..--+.+
T Consensus 27 ~~~~g~g---~pkIcvpl~~---~t~~e~~-~~~~~~~~gaD~VElRvD~l~~~~~~~v~~~l~~~---~---~~~PiI~ 93 (259)
T 3l9c_A 27 GQQMGRG---SMKIVVPVMP---QNIEEAN-QLDLTRIDSTDIIEWRADYLVKDDILTVAPAIFEK---F---SGHEVIF 93 (259)
T ss_dssp ----------CCEEEEEECC---SSHHHHH-HCCCTTCCTTCEEEEEGGGSCGGGHHHHHHHHHHH---T---TTSEEEE
T ss_pred CcEECCC---CcEEEEEecC---CCHHHHH-HHHHhhccCCCEEEEEeccccchhHHHHHHHHHHh---c---CCCcEEE
Confidence 3445665 6666655444 3445543 1222334577766543333221 1222333322 1 2233555
Q ss_pred Eecc----CCCCCChhhHHHHHHHHHHhhCCCcccEE
Q 025159 91 ASKL----WCSDAHRELVVPALQKSLENLQLEYIDLY 123 (257)
Q Consensus 91 ~tK~----~~~~~~~~~i~~~l~~sL~~Lg~d~lDl~ 123 (257)
+.+. +....+.+.-.+-++..++.++.||||+=
T Consensus 94 T~Rt~~EGG~~~~~~~~y~~ll~~~~~~~~~dyIDVE 130 (259)
T 3l9c_A 94 TLRTEKEGGNISLSNEDYLAIIRDIAALYQPDYIDFE 130 (259)
T ss_dssp ECCBGGGTCSBCCCHHHHHHHHHHHHHHHCCSEEEEE
T ss_pred EEeehhhCCCCCCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 5554 11223445555667777777999999984
No 149
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=60.68 E-value=73 Score=27.80 Aligned_cols=71 Identities=6% Similarity=-0.045 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHc-----CCe-eEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCC---cHHHHHHHHHCCceEEEec
Q 025159 151 KSVWEAMEECQNL-----GYT-KAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQ---QNKLREFCKAKDIQLAAYA 221 (257)
Q Consensus 151 ~~~~~~l~~l~~~-----G~i-r~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~---~~~~~~~~~~~gi~v~~~~ 221 (257)
.+-|+.+.+|.++ -.| -..|=+-++.+.+.++++...++ ++|+..+-+.- ...+.+.|+++|+.++.++
T Consensus 282 ~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~d--~i~ik~~~~GGitea~~i~~~A~~~gi~~~~~~ 359 (413)
T 1kko_A 282 PDQIRMLTAITKELTRLGSGVKIVADEWCNTYQDIVDFTDAGSCH--MVQIKTPDLGGIHNIVDAVLYCNKHGMEAYQGG 359 (413)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCEEEECTTCCSHHHHHHHHHTTCCS--EEEECGGGGSSTHHHHHHHHHHHHHTCEEEECC
T ss_pred cccHHHHHHHHHhcccCCCCCcEEcCCCCCCHHHHHHHHHhCCCC--EEEeCccccCCHHHHHHHHHHHHHcCCeEEecC
Confidence 4567778887775 333 34566778899999998876555 77776654322 3689999999999999987
Q ss_pred CC
Q 025159 222 PL 223 (257)
Q Consensus 222 pl 223 (257)
..
T Consensus 360 ~~ 361 (413)
T 1kko_A 360 TC 361 (413)
T ss_dssp CT
T ss_pred CC
Confidence 75
No 150
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=60.37 E-value=39 Score=28.30 Aligned_cols=97 Identities=12% Similarity=0.087 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCCC
Q 025159 150 FKSVWEAMEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTI 229 (257)
Q Consensus 150 ~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~l 229 (257)
.+.+...++.+++.+. -|.|-+++++.++++++... +.+| ..+... ..++++.++++|++++.+.-- |.-
T Consensus 83 ~~Rv~pvi~~l~~~~v--piSIDT~~~~Va~aAl~aGa--~iIN--dVsg~~-d~~m~~~~a~~~~~vVlmh~~---G~p 152 (294)
T 2y5s_A 83 LARVIPLVEALRPLNV--PLSIDTYKPAVMRAALAAGA--DLIN--DIWGFR-QPGAIDAVRDGNSGLCAMHML---GEP 152 (294)
T ss_dssp HHHHHHHHHHHGGGCS--CEEEECCCHHHHHHHHHHTC--SEEE--ETTTTC-STTHHHHHSSSSCEEEEECCC---EET
T ss_pred HHHHHHHHHHHhhCCC--eEEEECCCHHHHHHHHHcCC--CEEE--ECCCCC-chHHHHHHHHhCCCEEEECCC---CCC
Confidence 4556666777776633 38999999999999999843 4455 344444 557999999999999998642 321
Q ss_pred CCC----CCcc--------ChHHHHHHHHHhCCCccccc
Q 025159 230 WGS----NRVM--------ECEVLKEIAEAKGKTVAQVL 256 (257)
Q Consensus 230 ~~~----~~~~--------~~~~~~~ia~~~~~s~~qva 256 (257)
... ..+. .-....+.|.++|+.+.++.
T Consensus 153 ~tm~~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi~~~~Ii 191 (294)
T 2y5s_A 153 QTMQVGEPDYGDVVTDVRDFLAARAQALRDAGVAAERIC 191 (294)
T ss_dssp TTTEECCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred ccccccCCccccHHHHHHHHHHHHHHHHHHcCCChhhEE
Confidence 110 0010 11334556678898877764
No 151
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=60.19 E-value=32 Score=24.54 Aligned_cols=64 Identities=14% Similarity=0.167 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEe
Q 025159 151 KSVWEAMEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAY 220 (257)
Q Consensus 151 ~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~ 220 (257)
+.+...|....+.|++. .|+ .+..+.++......+++--+.++...-..+...|+++||+++-.
T Consensus 6 ~ki~~~L~~a~k~gkl~-~G~-----~~v~kai~~gkakLViiA~D~~~~~~~~~l~~lc~~~~VP~~~v 69 (121)
T 2lbw_A 6 KKVLKTVKKASKAKNVK-RGV-----KEVVKALRKGEKGLVVIAGDIWPADVISHIPVLCEDHSVPYIFI 69 (121)
T ss_dssp HHHHHHHHHHHTTTCEE-ESH-----HHHHHHHHHSCCCEEEECTTCSCTTHHHHHHHHHHHTCCCEEEC
T ss_pred HHHHHHHHHHHHcCCcc-ccH-----HHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHhcCCcEEEE
Confidence 34566677777888874 565 67778888888887787777776544567889999999998754
No 152
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=59.58 E-value=85 Score=26.98 Aligned_cols=151 Identities=14% Similarity=-0.037 Sum_probs=85.4
Q ss_pred ChhHHHHHHHHHHH-cCCceeeCCCCCCC---hHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHH
Q 025159 38 GSETTKLAILEAMK-LGYRHFDTATLYQT---EQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLE 113 (257)
Q Consensus 38 ~~~~~~~~l~~Al~-~Gi~~~DtA~~Yg~---e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~ 113 (257)
+.++..+....+++ .|++.|-.--.... +...=+++|+. --+++-|...... .++++...+ +-+.|+
T Consensus 147 ~~~~~~~~~~~~~~~~G~~~~KiKvg~~~~~~d~~~v~avR~a-------~g~~~~l~vDaN~-~~~~~~A~~-~~~~l~ 217 (381)
T 3fcp_A 147 DTAKDIAEGEKLLAEGRHRAFKLKIGARELATDLRHTRAIVEA-------LGDRASIRVDVNQ-AWDAATGAK-GCRELA 217 (381)
T ss_dssp CHHHHHHHHHHHTC----CEEEEECCSSCHHHHHHHHHHHHHH-------TCTTCEEEEECTT-CBCHHHHHH-HHHHHH
T ss_pred ChHHHHHHHHHHHHhCCCCEEEEecCCCChHHHHHHHHHHHHH-------cCCCCeEEEECCC-CCCHHHHHH-HHHHHh
Confidence 44555555556665 69998754322211 22223345554 1245556655433 334443332 233455
Q ss_pred hhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe-eEEEecCCCHHHHHHHHHhCCCCCce
Q 025159 114 NLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT-KAIGVSNFSCKKLGDILATAKIPPAA 192 (257)
Q Consensus 114 ~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~p~~ 192 (257)
.++ +.++..|... +-++.+.++++.-.+ -..|=+-++...+.++++...++ +
T Consensus 218 ~~~-----i~~iEeP~~~--------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d--~ 270 (381)
T 3fcp_A 218 AMG-----VDLIEQPVSA--------------------HDNAALVRLSQQIETAILADEAVATAYDGYQLAQQGFTG--A 270 (381)
T ss_dssp HTT-----CSEEECCBCT--------------------TCHHHHHHHHHHSSSEEEESTTCCSHHHHHHHHHTTCCS--E
T ss_pred hcC-----ccceeCCCCc--------------------ccHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCC--E
Confidence 544 4566776321 125666777765444 45567788999999998876655 6
Q ss_pred eccccCCC---CCcHHHHHHHHHCCceEEEecCCC
Q 025159 193 NQVEMNPL---WQQNKLREFCKAKDIQLAAYAPLG 224 (257)
Q Consensus 193 ~q~~~~~~---~~~~~~~~~~~~~gi~v~~~~pl~ 224 (257)
+|....-+ ..-..+.+.|+++|+.++..+.+.
T Consensus 271 v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~e 305 (381)
T 3fcp_A 271 YALKIAKAGGPNSVLALARVAQAAGIGLYGGTMLE 305 (381)
T ss_dssp EEECHHHHTSTTHHHHHHHHHHHHTCEEEECCSCC
T ss_pred EEecccccCCHHHHHHHHHHHHHcCCceecCCCCc
Confidence 77665432 223678999999999998876654
No 153
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=59.16 E-value=36 Score=24.61 Aligned_cols=64 Identities=6% Similarity=0.089 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHc----CCeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEec
Q 025159 152 SVWEAMEECQNL----GYTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYA 221 (257)
Q Consensus 152 ~~~~~l~~l~~~----G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~ 221 (257)
++-.+|.++.+. |++. .|+ .+..++++......+++--+.++......+..+|++++|+++-+.
T Consensus 7 ~i~~~l~~~L~~A~~~gkl~-~G~-----~~v~Kai~~gka~LViiA~D~~p~~~~~~i~~lc~~~~Ip~~~v~ 74 (126)
T 2xzm_U 7 QLNEVLAKVIKSSNCQDAIS-KGL-----HEVLRTIEAKQALFVCVAEDCDQGNYVKLVKALCAKNEIKYVSVP 74 (126)
T ss_dssp HHHHHHHHHHTTTTSSSCEE-ESH-----HHHHHHHHHTCCSEEEEESSCCSTTHHHHHHHHHHHTTCCEEEES
T ss_pred cHHHHHHHHHHHHHHcCCEe-ecH-----HHHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEEC
Confidence 444556665555 8864 565 677778888888877777676654555678899999999998653
No 154
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=58.97 E-value=80 Score=26.45 Aligned_cols=133 Identities=8% Similarity=0.014 Sum_probs=77.3
Q ss_pred ChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHc----CCeeEEEecCCC
Q 025159 100 HRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNL----GYTKAIGVSNFS 175 (257)
Q Consensus 100 ~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~----G~ir~iGvs~~~ 175 (257)
+++.+.+..++.. +-|.|.||+=. ..+ ..+.++.++.+..+.+. -.+ -|-|-+++
T Consensus 35 ~~~~a~~~A~~~v-~~GAdiIDIg~-g~~------------------~v~~~eem~rvv~~i~~~~~~~~v-pisIDT~~ 93 (300)
T 3k13_A 35 KYDEALSIARQQV-EDGALVIDVNM-DDG------------------LLDARTEMTTFLNLIMSEPEIARV-PVMIDSSK 93 (300)
T ss_dssp CHHHHHHHHHHHH-HTTCSEEEEEC-CCT------------------TSCHHHHHHHHHHHHHTCHHHHTS-CEEEECSC
T ss_pred CHHHHHHHHHHHH-HCCCCEEEECC-CCC------------------CCCHHHHHHHHHHHHHHhhhcCCC-eEEEeCCC
Confidence 3455555555544 57999999876 111 11233444444443331 112 48899999
Q ss_pred HHHHHHHHHhCCCCCceeccccCCCCCcH---HHHHHHHHCCceEEEecCCCCCCCCCC-CCCccChHHHHHHH-HHhCC
Q 025159 176 CKKLGDILATAKIPPAANQVEMNPLWQQN---KLREFCKAKDIQLAAYAPLGARGTIWG-SNRVMECEVLKEIA-EAKGK 250 (257)
Q Consensus 176 ~~~l~~~~~~~~~~p~~~q~~~~~~~~~~---~~~~~~~~~gi~v~~~~pl~~~G~l~~-~~~~~~~~~~~~ia-~~~~~ 250 (257)
++.+++.++.+.-.+.+|- .|....+. .+++.++++|.+++.+.--.. |.-.. .......+++.+.+ .++|+
T Consensus 94 ~~V~eaaL~~~~Ga~iINd--Is~~~~d~~~~~~~~l~a~~ga~vV~mh~d~~-G~p~t~~~~~~i~~r~~~~~~~~~Gi 170 (300)
T 3k13_A 94 WEVIEAGLKCLQGKSIVNS--ISLKEGEEVFLEHARIIKQYGAATVVMAFDEK-GQADTAARKIEVCERAYRLLVDKVGF 170 (300)
T ss_dssp HHHHHHHHHHCSSCCEEEE--ECSTTCHHHHHHHHHHHHHHTCEEEEESEETT-EECCSHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHhcCCCCEEEe--CCcccCChhHHHHHHHHHHhCCeEEEEeeCCC-CCCCCHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999997543456664 34443333 799999999999998854222 32100 00011124444554 88999
Q ss_pred Cccccc
Q 025159 251 TVAQVL 256 (257)
Q Consensus 251 s~~qva 256 (257)
++.++.
T Consensus 171 ~~~~Ii 176 (300)
T 3k13_A 171 NPHDII 176 (300)
T ss_dssp CGGGEE
T ss_pred CHHHEE
Confidence 887764
No 155
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=58.50 E-value=91 Score=26.98 Aligned_cols=146 Identities=11% Similarity=0.038 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHcCCceeeC-CCCC--CC---hHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCC-ChhhHHHHHHHHHH
Q 025159 41 TTKLAILEAMKLGYRHFDT-ATLY--QT---EQPLGDAIAEALSTGIIKSRDELFIASKLWCSDA-HRELVVPALQKSLE 113 (257)
Q Consensus 41 ~~~~~l~~Al~~Gi~~~Dt-A~~Y--g~---e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~-~~~~i~~~l~~sL~ 113 (257)
+..+.++.+++.|++.|=. --.. .+ ....=+++|+.+ | +++-|...... .+ +.+...+- -+.|+
T Consensus 160 ~~~~~a~~~~~~G~~~~K~~k~g~~~~~~~~d~e~v~avR~a~--G-----~d~~l~vDaN~-~~~~~~~A~~~-~~~L~ 230 (394)
T 3mkc_A 160 GYAPLLEKAKAHNIRAVKVCVPIKADWSTKEVAYYLRELRGIL--G-----HDTDMMVDYLY-RFTDWYEVARL-LNSIE 230 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTCCCCHHHHHHHHHHHHHHH--C-----SSSEEEEECTT-CCCCHHHHHHH-HHHTG
T ss_pred HHHHHHHHHHHcCCCEEEeCccCCCccCHHHHHHHHHHHHHHh--C-----CCCeEEEeCCC-CCCCHHHHHHH-HHHhh
Confidence 4556778888999998865 2221 11 112233455542 2 34455555432 23 33333332 23445
Q ss_pred hhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCee-EEEecCCCHHHHHHHHHhCCCCCce
Q 025159 114 NLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTK-AIGVSNFSCKKLGDILATAKIPPAA 192 (257)
Q Consensus 114 ~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~p~~ 192 (257)
.++ +.+++.|... +-+..+.++++.-.|- ..|=+-+++..+.++++...++ +
T Consensus 231 ~~~-----i~~iEeP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d--~ 283 (394)
T 3mkc_A 231 DLE-----LYFAEATLQH--------------------DDLSGHAKLVENTRSRICGAEMSTTRFEAEEWITKGKVH--L 283 (394)
T ss_dssp GGC-----CSEEESCSCT--------------------TCHHHHHHHHHHCSSCBEECTTCCHHHHHHHHHHTTCCS--E
T ss_pred hcC-----CeEEECCCCc--------------------hhHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCC--e
Confidence 555 4455666321 1246677777765553 4455667888999998876655 7
Q ss_pred eccccCCCCC---cHHHHHHHHHCCceEEEecC
Q 025159 193 NQVEMNPLWQ---QNKLREFCKAKDIQLAAYAP 222 (257)
Q Consensus 193 ~q~~~~~~~~---~~~~~~~~~~~gi~v~~~~p 222 (257)
+|....-+.- -..+.+.|+++|+.++.++.
T Consensus 284 v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 316 (394)
T 3mkc_A 284 LQSDYNRCGGLTELRRITEMATANNVQVMPHNW 316 (394)
T ss_dssp ECCCTTTTTHHHHHHHHHHHHHHTTCEECCCCC
T ss_pred EecCccccCCHHHHHHHHHHHHHcCCEEeecCC
Confidence 7777655432 26789999999999987663
No 156
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=58.45 E-value=91 Score=26.96 Aligned_cols=146 Identities=13% Similarity=0.046 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHcCCceeeC-CCCC--CC---hHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCC-ChhhHHHHHHHHHH
Q 025159 41 TTKLAILEAMKLGYRHFDT-ATLY--QT---EQPLGDAIAEALSTGIIKSRDELFIASKLWCSDA-HRELVVPALQKSLE 113 (257)
Q Consensus 41 ~~~~~l~~Al~~Gi~~~Dt-A~~Y--g~---e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~-~~~~i~~~l~~sL~ 113 (257)
+..+..+.+.+.|++.|=. --.. .+ ....=+++|+.+ | +++-|...... .+ +.+...+ +-+.|+
T Consensus 155 ~~~~~a~~~~~~G~~~~K~~k~g~~~~~~~~d~~~v~avR~a~--G-----~d~~l~vDan~-~~~~~~~A~~-~~~~L~ 225 (394)
T 3mqt_A 155 AYKPLIAKAKERGAKAVKVCIIPNDKVSDKEIVAYLRELREVI--G-----WDMDMMVDCLY-RWTDWQKARW-TFRQLE 225 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCCTTSCHHHHHHHHHHHHHHH--C-----SSSEEEEECTT-CCSCHHHHHH-HHHHTG
T ss_pred HHHHHHHHHHHcCCCEEEecccCCCccCHHHHHHHHHHHHHHh--C-----CCCeEEEECCC-CCCCHHHHHH-HHHHHh
Confidence 4556778888999998865 2221 11 112233455542 2 44555556533 23 3333332 233455
Q ss_pred hhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCee-EEEecCCCHHHHHHHHHhCCCCCce
Q 025159 114 NLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTK-AIGVSNFSCKKLGDILATAKIPPAA 192 (257)
Q Consensus 114 ~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~p~~ 192 (257)
.+|+ .+++.|... +-++.+.++++.-.|- ..|=+-+++..+.++++...++ +
T Consensus 226 ~~~i-----~~iEeP~~~--------------------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d--~ 278 (394)
T 3mqt_A 226 DIDL-----YFIEACLQH--------------------DDLIGHQKLAAAINTRLCGAEMSTTRFEAQEWLEKTGIS--V 278 (394)
T ss_dssp GGCC-----SEEESCSCT--------------------TCHHHHHHHHHHSSSEEEECTTCCHHHHHHHHHHHHCCS--E
T ss_pred hcCC-----eEEECCCCc--------------------ccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCC--e
Confidence 5554 455666321 1245677777765554 3455567788999998876655 7
Q ss_pred eccccCCCCC---cHHHHHHHHHCCceEEEecC
Q 025159 193 NQVEMNPLWQ---QNKLREFCKAKDIQLAAYAP 222 (257)
Q Consensus 193 ~q~~~~~~~~---~~~~~~~~~~~gi~v~~~~p 222 (257)
+|....-+.- -..+.+.|+++|+.++.++.
T Consensus 279 v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 311 (394)
T 3mqt_A 279 VQSDYNRCGGVTELLRIMDICEHHNAQLMPHNW 311 (394)
T ss_dssp ECCCTTTSSCHHHHHHHHHHHHHHTCEECCCCC
T ss_pred EecCccccCCHHHHHHHHHHHHHcCCEEeccCC
Confidence 7777665432 26789999999999987764
No 157
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=57.69 E-value=47 Score=27.86 Aligned_cols=100 Identities=12% Similarity=0.067 Sum_probs=57.4
Q ss_pred hhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEEecCCCHHHHHH
Q 025159 102 ELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGVSNFSCKKLGD 181 (257)
Q Consensus 102 ~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~ 181 (257)
..-+..+-+.|.++|+++|.+-..-.|... | . ..+.++.+..+.+...++..++. -+...++.
T Consensus 27 ~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~-p-------------~--~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~ 89 (307)
T 1ydo_A 27 TEDKITWINQLSRTGLSYIEITSFVHPKWI-P-------------A--LRDAIDVAKGIDREKGVTYAALV-PNQRGLEN 89 (307)
T ss_dssp HHHHHHHHHHHHTTTCSEEEEEECSCTTTC-G-------------G--GTTHHHHHHHSCCCTTCEEEEEC-CSHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCcCcccc-c-------------c--cCCHHHHHHHhhhcCCCeEEEEe-CCHHhHHH
Confidence 345667777889999999999764443211 1 0 11223444555555566666666 46777888
Q ss_pred HHHhCCCCCceeccc-------cCCCCC-------cHHHHHHHHHCCceEEE
Q 025159 182 ILATAKIPPAANQVE-------MNPLWQ-------QNKLREFCKAKDIQLAA 219 (257)
Q Consensus 182 ~~~~~~~~p~~~q~~-------~~~~~~-------~~~~~~~~~~~gi~v~~ 219 (257)
+++.. ++..-+-.. .|+-.. -.+.+++++++|+.+.+
T Consensus 90 a~~~g-~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~ 140 (307)
T 1ydo_A 90 ALEGG-INEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRA 140 (307)
T ss_dssp HHHHT-CSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHhCC-cCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEE
Confidence 77753 331111111 111111 15679999999999864
No 158
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=57.35 E-value=64 Score=28.62 Aligned_cols=148 Identities=9% Similarity=0.027 Sum_probs=90.0
Q ss_pred CChhHHHHHHHHHHHc-CCceeeCCCCCCC-hH--HHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHH
Q 025159 37 SGSETTKLAILEAMKL-GYRHFDTATLYQT-EQ--PLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSL 112 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~-Gi~~~DtA~~Yg~-e~--~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL 112 (257)
.++++..+..+.+++. |++.|=.-....+ +. ..=+++|+.+ +++-|..-.. ..++++. ..+.+
T Consensus 190 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea~--------~~~~L~vDaN-~~w~~~~----Ai~~~ 256 (445)
T 3va8_A 190 LDPEGVVKQAKKIIDEYGFKAIKLKGGVFPPADEVAAIKALHKAF--------PGVPLRLDPN-AAWTVET----SKWVA 256 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEECSSSCHHHHHHHHHHHHHHS--------TTCCEEEECT-TCBCHHH----HHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCCCHHHHHHHHHHHHHhC--------CCCcEeeeCC-CCCCHHH----HHHHH
Confidence 4677777888888874 9997743322211 22 2234566652 3333333322 2233332 22345
Q ss_pred HhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe-eEEEecCCCHHHHHHHHHhCCCCCc
Q 025159 113 ENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT-KAIGVSNFSCKKLGDILATAKIPPA 191 (257)
Q Consensus 113 ~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~p~ 191 (257)
++|. ++ +.++..|. . -++.+.++++.-.| -+.|=|-++...+.++++...++
T Consensus 257 ~~L~-~~--l~~iEeP~-------------------~---d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d-- 309 (445)
T 3va8_A 257 KELE-GI--VEYLEDPA-------------------G---EIEGMAAVAKEASMPLATNMAVVAFDHLPPSILQDAVQ-- 309 (445)
T ss_dssp HHTT-TT--CSEEESCB-------------------S---HHHHHHHHHTTCSSCEEESSSCCSGGGHHHHHHTTCCS--
T ss_pred HHHh-hh--cCeEeecC-------------------c---CHHHHHHHHHcCCCCEEeCCccCCHHHHHHHHHcCCCC--
Confidence 5554 33 77777772 1 25677778776444 35677788899999998876665
Q ss_pred eeccccCCCC---CcHHHHHHHHHCCceEEEecCCC
Q 025159 192 ANQVEMNPLW---QQNKLREFCKAKDIQLAAYAPLG 224 (257)
Q Consensus 192 ~~q~~~~~~~---~~~~~~~~~~~~gi~v~~~~pl~ 224 (257)
++|....-+. .-..+.+.|+++|+.+..++...
T Consensus 310 iv~~d~~~~GGitea~kia~lA~~~gv~v~~h~~~e 345 (445)
T 3va8_A 310 VILSDHHFWGGLRKSQTLASICATWGLRLSMHSNSH 345 (445)
T ss_dssp EEEECHHHHTSHHHHHHHHHHHHHHTCEEEECCCSC
T ss_pred EEEecchhcCCHHHHHHHHHHHHHcCCEEEEeCCcc
Confidence 7777654322 23678999999999999887653
No 159
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=56.98 E-value=90 Score=27.17 Aligned_cols=66 Identities=17% Similarity=0.212 Sum_probs=45.9
Q ss_pred HHHHHHHHHcCCee-EEEecCCCHHHHHHHHHhCCCCCceeccccCCC--CCcHHHHHHHHHCCceEEEec
Q 025159 154 WEAMEECQNLGYTK-AIGVSNFSCKKLGDILATAKIPPAANQVEMNPL--WQQNKLREFCKAKDIQLAAYA 221 (257)
Q Consensus 154 ~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~--~~~~~~~~~~~~~gi~v~~~~ 221 (257)
++.+.++++.-.|- ..|=+-++++.+.++++...++ ++|....-. .....+.+.|+++|+.++.+.
T Consensus 251 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d--~v~~k~~~GGit~~~~ia~~A~~~gi~~~~h~ 319 (409)
T 3go2_A 251 PQGLAYVRNHSPHPISSCETLFGIREFKPFFDANAVD--VAIVDTIWNGVWQSMKIAAFADAHDINVAPHN 319 (409)
T ss_dssp HHHHHHHHHTCSSCEEECTTCCHHHHHHHHHHTTCCS--EEEECHHHHCHHHHHHHHHHHHHTTCEEEECC
T ss_pred HHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCC--EEEeCCCCCCHHHHHHHHHHHHHcCCEEeecC
Confidence 45577777765553 3455667888999998876655 777665431 112578999999999998753
No 160
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=55.96 E-value=87 Score=25.97 Aligned_cols=128 Identities=13% Similarity=0.055 Sum_probs=68.9
Q ss_pred hhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEEecCCCHHHHHH
Q 025159 102 ELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGVSNFSCKKLGD 181 (257)
Q Consensus 102 ~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~ 181 (257)
..-+..+-+.|.++|+++|..-....|... + . ..+.++.+..+.+...++..+.. -+.+.+++
T Consensus 29 ~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~-~-------------~--~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~ 91 (302)
T 2ftp_A 29 VADKIRLVDDLSAAGLDYIEVGSFVSPKWV-P-------------Q--MAGSAEVFAGIRQRPGVTYAALA-PNLKGFEA 91 (302)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEECSCTTTC-G-------------G--GTTHHHHHHHSCCCTTSEEEEEC-CSHHHHHH
T ss_pred HHHHHHHHHHHHHcCcCEEEECCCcCcccc-c-------------c--ccCHHHHHHHhhhcCCCEEEEEe-CCHHHHHH
Confidence 455667777889999988888663333210 1 0 11233444555555566655655 47778888
Q ss_pred HHHhCCCCCceecc--ccCCC--------CC------cHHHHHHHHHCCceEEEecCCCCCCCCCCCCCccChHHHHHHH
Q 025159 182 ILATAKIPPAANQV--EMNPL--------WQ------QNKLREFCKAKDIQLAAYAPLGARGTIWGSNRVMECEVLKEIA 245 (257)
Q Consensus 182 ~~~~~~~~p~~~q~--~~~~~--------~~------~~~~~~~~~~~gi~v~~~~pl~~~G~l~~~~~~~~~~~~~~ia 245 (257)
+++. +++ .+.+ ..|.. .. -.+.+++|+++|+.|.++-.... |.- .......+.+.+++
T Consensus 92 a~~a-G~~--~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~-~~e--~~~~~~~~~~~~~~ 165 (302)
T 2ftp_A 92 ALES-GVK--EVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVL-GCP--YDGDVDPRQVAWVA 165 (302)
T ss_dssp HHHT-TCC--EEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTT-CBT--TTBCCCHHHHHHHH
T ss_pred HHhC-CcC--EEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEe-eCC--cCCCCCHHHHHHHH
Confidence 8774 443 2222 11111 11 15789999999999864322111 110 00122345566666
Q ss_pred H---HhCCCc
Q 025159 246 E---AKGKTV 252 (257)
Q Consensus 246 ~---~~~~s~ 252 (257)
+ +.|++.
T Consensus 166 ~~~~~~G~d~ 175 (302)
T 2ftp_A 166 RELQQMGCYE 175 (302)
T ss_dssp HHHHHTTCSE
T ss_pred HHHHHcCCCE
Confidence 5 666543
No 161
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=55.59 E-value=20 Score=25.18 Aligned_cols=63 Identities=13% Similarity=0.132 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEe
Q 025159 151 KSVWEAMEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAY 220 (257)
Q Consensus 151 ~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~ 220 (257)
..+...|....+.|++. .|+ .+..+.++.......+.-.+. +.+....+..+|++++|+++.+
T Consensus 7 ~~i~~~L~la~kagkl~-~G~-----~~v~kai~~gka~lViiA~D~-~~~~~~~l~~~c~~~~Vp~~~~ 69 (110)
T 3cpq_A 7 MDVNKAIRTAVDTGKVI-LGS-----KRTIKFVKHGEGKLVVLAGNI-PKDLEEDVKYYAKLSNIPVYQH 69 (110)
T ss_dssp CHHHHHHHHHHHHSEEE-ESH-----HHHHHHHHTTCCSEEEECTTC-BHHHHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHHHcCCee-eCH-----HHHHHHHHcCCceEEEEeCCC-CHHHHHHHHHHHHHcCCCEEEE
Confidence 35677788888888874 565 677888887777666665444 2233367888999999998876
No 162
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=55.03 E-value=27 Score=25.53 Aligned_cols=64 Identities=14% Similarity=0.199 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEe
Q 025159 151 KSVWEAMEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAY 220 (257)
Q Consensus 151 ~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~ 220 (257)
..+.+.|....+.|++. .|+ .+..++++......+++--+.++...-..+...|+++||+++-.
T Consensus 18 ~ki~~~L~lA~k~gkl~-~G~-----~~v~kai~~gkakLViiA~D~~p~~~~~~l~~lc~~~~VP~~~v 81 (134)
T 2ale_A 18 QQILDVVQQAANLRQLK-KGA-----NEATKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFV 81 (134)
T ss_dssp HHHHHHHHHHHHTTCEE-ESH-----HHHHHHHHHTCEEEEEEETTCSSGGGGTHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHcCCcc-cCc-----hHHHHHHHhCCCeEEEEeCCCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 35667777778889875 566 77788888887777777777766544567889999999997755
No 163
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=54.45 E-value=92 Score=26.30 Aligned_cols=95 Identities=8% Similarity=0.027 Sum_probs=60.0
Q ss_pred HHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCCCC-C
Q 025159 153 VWEAMEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTIW-G 231 (257)
Q Consensus 153 ~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~l~-~ 231 (257)
+...++.+++.-.+ -|.|-+++++.++++++... ..+| ..+... ..++++.+.++|++++.+..- |.-. .
T Consensus 93 v~pvI~~l~~~~~v-pISIDT~~~~Va~aAl~aGa--~iIN--DVsg~~-~~~m~~v~a~~g~~vVlMh~~---G~P~tm 163 (314)
T 3tr9_A 93 LLPVIDAIKKRFPQ-LISVDTSRPRVMREAVNTGA--DMIN--DQRALQ-LDDALTTVSALKTPVCLMHFP---SETRKP 163 (314)
T ss_dssp HHHHHHHHHHHCCS-EEEEECSCHHHHHHHHHHTC--CEEE--ETTTTC-STTHHHHHHHHTCCEEEECCC---CTTCCT
T ss_pred HHHHHHHHHhhCCC-eEEEeCCCHHHHHHHHHcCC--CEEE--ECCCCC-chHHHHHHHHhCCeEEEECCC---CCCccc
Confidence 55566666665222 48999999999999999742 3455 333333 347999999999999987633 3211 0
Q ss_pred CCCc---------cChHHHHHHHHHhCCCccccc
Q 025159 232 SNRV---------MECEVLKEIAEAKGKTVAQVL 256 (257)
Q Consensus 232 ~~~~---------~~~~~~~~ia~~~~~s~~qva 256 (257)
.... ..-....+.|.+.|++..++.
T Consensus 164 q~~~~ydvv~ev~~~l~~~i~~a~~~GI~~~~Ii 197 (314)
T 3tr9_A 164 GSTTHFYFLQSVKKELQESIQRCKKAGISEDRII 197 (314)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred ccccccchHHHHHHHHHHHHHHHHHcCCCHhHEE
Confidence 0000 011344556778898877664
No 164
>3o85_A Ribosomal protein L7AE; alpha beta sandwich fold, K-turn RNA binding protein, KINK T ribosomal protein; 1.81A {Giardia lamblia}
Probab=54.33 E-value=35 Score=24.43 Aligned_cols=65 Identities=12% Similarity=0.088 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEe
Q 025159 150 FKSVWEAMEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAY 220 (257)
Q Consensus 150 ~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~ 220 (257)
.+.+...|....+.|++. .|+ .+..++++.......+.-.+.++...-..+...|+++||+++-.
T Consensus 16 ~~kil~~L~lA~kagklv-~G~-----~~v~kai~~gka~lViiA~D~~p~~~~~~l~~lc~~~~VP~~~v 80 (122)
T 3o85_A 16 SLELLNLVKHGASLQAIK-RGA-----NEALKQVNRGKAELVIIAADADPIEIVLHLPLACEDKGVPYVFI 80 (122)
T ss_dssp HHHHHHHHHHHHHTTCEE-ESH-----HHHHHHHHTTCCSEEEEETTCSSGGGGTTHHHHHHTTTCCEEEE
T ss_pred HHHHHHHHHHHHHhCCEe-EcH-----HHHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEE
Confidence 446777788888899974 665 67888888888887777777766443356889999999997643
No 165
>1vq8_F 50S ribosomal protein L7AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.79.3.1 PDB: 1vq4_F* 1vq5_F* 1vq6_F* 1vq7_F* 1s72_F* 1vq9_F* 1vqk_F* 1vql_F* 1vqm_F* 1vqn_F* 1vqo_F* 1vqp_F* 1yhq_F* 1yi2_F* 1yij_F* 1yit_F* 1yj9_F* 1yjn_F* 1yjw_F* 2otj_F* ...
Probab=54.32 E-value=35 Score=24.26 Aligned_cols=64 Identities=14% Similarity=0.160 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEe
Q 025159 151 KSVWEAMEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAY 220 (257)
Q Consensus 151 ~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~ 220 (257)
+.+.+.|....+.|++. .|+ .+..+.++.......+.--+.++......+...|++++|+++-.
T Consensus 15 ~~i~~~L~~A~kag~l~-~G~-----~~v~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~~ 78 (120)
T 1vq8_F 15 DDALEALEVARDTGAVK-KGT-----NETTKSIERGSAELVFVAEDVQPEEIVMHIPELADEKGVPFIFV 78 (120)
T ss_dssp HHHHHHHHHHHHSSCEE-ESH-----HHHHHHHHHTCCSEEEEESCCSSGGGTTTHHHHHHTTCCCEEEE
T ss_pred HHHHHHHHHHHHcCCEe-ECH-----HHHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHhcCCCEEEE
Confidence 45667777777889874 565 77788888888777777777766443456889999999997543
No 166
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=53.62 E-value=91 Score=26.36 Aligned_cols=63 Identities=11% Similarity=-0.008 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHc--CCeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEec
Q 025159 152 SVWEAMEECQNL--GYTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYA 221 (257)
Q Consensus 152 ~~~~~l~~l~~~--G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~ 221 (257)
.+...++.++++ +. -|.|-+++++.++++++... ..+| ..+... ..++++.++++|++++.+.
T Consensus 103 Rv~pvI~~l~~~~~~v--pISIDT~~~~VaeaAl~aGa--~iIN--DVsg~~-d~~m~~vaa~~g~~vVlmh 167 (318)
T 2vp8_A 103 RLVPFIEWLRGAYPDQ--LISVDTWRAQVAKAACAAGA--DLIN--DTWGGV-DPAMPEVAAEFGAGLVCAH 167 (318)
T ss_dssp HHHHHHHHHHHHSTTC--EEEEECSCHHHHHHHHHHTC--CEEE--ETTSSS-STTHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHHHhhCCCC--eEEEeCCCHHHHHHHHHhCC--CEEE--ECCCCC-chHHHHHHHHhCCCEEEEC
Confidence 344456666665 43 48999999999999999843 2344 334443 5689999999999999986
No 167
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=52.97 E-value=1.1e+02 Score=26.08 Aligned_cols=152 Identities=10% Similarity=0.059 Sum_probs=91.5
Q ss_pred ChhHHHHHHHHHHHcCCceeeCCCCCCC-hH--HHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHh
Q 025159 38 GSETTKLAILEAMKLGYRHFDTATLYQT-EQ--PLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLEN 114 (257)
Q Consensus 38 ~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~-e~--~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~ 114 (257)
+.+...+....+.+.|++.|=.--...+ +. ..=+++++. --+++.|..-.... ++++...+- -+.|+.
T Consensus 143 ~~~~~~~~~~~~~~~g~~~~K~Kvg~~~~~~d~~~v~avr~~-------~g~~~~l~vDaN~~-~~~~~A~~~-~~~l~~ 213 (370)
T 2chr_A 143 TKRDLDSAVEMIERRRHNRFKVKLGFRSPQDDLIHMEALSNS-------LGSKAYLRVDVNQA-WDEQVASVY-IPELEA 213 (370)
T ss_dssp HHHHHHHHHHHHHTTSCCEEEEECSSSCHHHHHHHHHHHHHH-------TTTTSEEEEECTTC-CCTHHHHHH-HHHHHT
T ss_pred hhhhHHHHHHHHhhcccceeecccccCChHHHHHHHHHHHHh-------cCCCcEEEecCCCC-CCHHHHHHH-HHHHHh
Confidence 4566677777777889987754433322 11 122344444 23455555444322 234433322 233333
Q ss_pred hCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe-eEEEecCCCHHHHHHHHHhCCCCCcee
Q 025159 115 LQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT-KAIGVSNFSCKKLGDILATAKIPPAAN 193 (257)
Q Consensus 115 Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~p~~~ 193 (257)
.++.++..|... +-++.|.+|++.-.| -+.|=|-++...+.++++...++ ++
T Consensus 214 -----~~~~~iEeP~~~--------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d--~i 266 (370)
T 2chr_A 214 -----LGVELIEQPVGR--------------------ENTQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVD--VF 266 (370)
T ss_dssp -----TTCCEEECCSCS--------------------SCHHHHHHHHHHCSSEEEESSSCCSHHHHHHHHTTTCCS--EE
T ss_pred -----cCCceecCCCCh--------------------hhhhhhhHHhhhccCCccCCccCCCHHHHHHHHHcCCCc--EE
Confidence 467778888532 124677788877665 35677788999999998876555 77
Q ss_pred ccccCCCC---CcHHHHHHHHHCCceEEEecCCCC
Q 025159 194 QVEMNPLW---QQNKLREFCKAKDIQLAAYAPLGA 225 (257)
Q Consensus 194 q~~~~~~~---~~~~~~~~~~~~gi~v~~~~pl~~ 225 (257)
|....-+. .-..+.+.|+++|+.++..+.+.+
T Consensus 267 ~~d~~~~GGit~~~~ia~~A~~~gi~~~~~~~~~~ 301 (370)
T 2chr_A 267 SLKLCNMGGVSATQKIAAVAEASGIASYGGTMLDS 301 (370)
T ss_dssp CCCHHHHTSHHHHHHHHHHHHHHTCEECCCCCSCC
T ss_pred EeCCcccCCHHHHHHHHHHHHHcCCeEEeCCCccc
Confidence 76654322 236789999999999987776643
No 168
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=52.56 E-value=20 Score=25.36 Aligned_cols=64 Identities=9% Similarity=0.128 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEe
Q 025159 150 FKSVWEAMEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAY 220 (257)
Q Consensus 150 ~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~ 220 (257)
.+.+...|....+.|++. .|. .+..+.++....+.+++--+.++ +....+..+|..++|+++-+
T Consensus 11 ~~~i~~~L~la~kagk~~-~G~-----~~t~kai~~gkakLVilA~D~~~-~~~~~i~~~c~~~~ipv~~~ 74 (112)
T 3iz5_f 11 GENINNKLQLVMKSGKYT-LGY-----KTVLKTLRSSLGKLIILANNCPP-LRKSEIETYAMLAKISVHHF 74 (112)
T ss_dssp GGHHHHHHHHHHTTCEEE-ESH-----HHHHHHHHTTCCSEEEECSCCCH-HHHHHHHHHHHHTTCCEECC
T ss_pred HHHHHHHHHHHHHhCCee-ECH-----HHHHHHHHcCCceEEEEeCCCCH-HHHHHHHHHHHHcCCcEEEe
Confidence 567888888899999873 565 67788888888777777666654 33467899999999999977
No 169
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Probab=52.44 E-value=69 Score=28.40 Aligned_cols=147 Identities=11% Similarity=0.048 Sum_probs=88.5
Q ss_pred CChhHHHHHHHHHHHc-CCceeeCCCCCCC-hH--HHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHH
Q 025159 37 SGSETTKLAILEAMKL-GYRHFDTATLYQT-EQ--PLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSL 112 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~-Gi~~~DtA~~Yg~-e~--~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL 112 (257)
.++++..+..+.+++. |++.|=.-....+ +. ..=+++|+.+ +++-|..-.. ..++++. ..+.+
T Consensus 192 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea~--------~d~~L~vDaN-~~w~~~~----Ai~~~ 258 (445)
T 3vdg_A 192 LDPDGIVAQARRMIDEYGFSAIKLKGGVFAPEEEMAAVEALRAAF--------PDHPLRLDPN-AAWTPQT----SVKVA 258 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSSSCHHHHHHHHHHHHHHC--------TTSCEEEECT-TCSCHHH----HHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCCCCHHHHHHHHHHHHHhC--------CCCcEEEECC-CCCCHHH----HHHHH
Confidence 4677777888888874 9997743222211 22 2234566652 3333333322 2233332 23344
Q ss_pred HhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe-eEEEecCCCHHHHHHHHHhCCCCCc
Q 025159 113 ENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT-KAIGVSNFSCKKLGDILATAKIPPA 191 (257)
Q Consensus 113 ~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~p~ 191 (257)
++|. ++ +.++..|.. -++.+.++++.-.| -+.|=+-++...+.++++...++
T Consensus 259 ~~L~-~~--l~~iEeP~~----------------------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~d-- 311 (445)
T 3vdg_A 259 AGLE-GV--LEYLEDPTP----------------------GLDGMAEVAAQAPMPLATNMCVVAFDQLPAAVAKNSVQ-- 311 (445)
T ss_dssp HHTT-TT--CSEEECCSS----------------------SHHHHHHHHHHCSSCEEESSSCCSGGGHHHHHHHTCCS--
T ss_pred HHHh-hH--HHeeeCCCC----------------------CHHHHHHHHhcCCCCEEcCCcCCCHHHHHHHHHcCCCC--
Confidence 5554 33 777888731 13566677665443 35677788889999998877665
Q ss_pred eeccccCCCC---CcHHHHHHHHHCCceEEEecCC
Q 025159 192 ANQVEMNPLW---QQNKLREFCKAKDIQLAAYAPL 223 (257)
Q Consensus 192 ~~q~~~~~~~---~~~~~~~~~~~~gi~v~~~~pl 223 (257)
++|....-+. ....+.+.|+++|+.+..++..
T Consensus 312 iv~~d~~~~GGitea~kia~lA~~~gv~v~~h~~~ 346 (445)
T 3vdg_A 312 VVLSDHHYWGGLQRSRLLAGICDTFGLGLSMHSNS 346 (445)
T ss_dssp EEEECHHHHTSHHHHHHHHHHHHHHTCEEEECCCS
T ss_pred EEeeCcceeCCHHHHHHHHHHHHHcCCEEEEeCCc
Confidence 7776654332 2367899999999999988765
No 170
>2fc3_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich, ribosome, RNA binding protein; 1.56A {Aeropyrum pernix} SCOP: d.79.3.1 PDB: 3pla_C* 3id5_C* 3hax_D* 2hvy_D* 3hay_D* 3nvi_B 3nmu_C 3nvk_E* 3lwr_C 3lwo_C* 3lwq_C* 3lwp_C 3lwv_C 3hjw_C* 2czw_A 1pxw_A
Probab=52.08 E-value=33 Score=24.55 Aligned_cols=64 Identities=16% Similarity=0.211 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEe
Q 025159 151 KSVWEAMEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAY 220 (257)
Q Consensus 151 ~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~ 220 (257)
+.+.+.|....+.|++. .|+ .+..+.++.......+.--+.++......+...|++++|+++-.
T Consensus 14 ~~i~~~L~lA~kagkl~-~G~-----~~v~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~v 77 (124)
T 2fc3_A 14 EKAYEAVKRARETGRIK-KGT-----NETTKAVERGLAKLVVIAEDVDPPEIVMHLPLLCDEKKIPYVYV 77 (124)
T ss_dssp HHHHHHHHHHHHHSEEE-ESH-----HHHHHHHHTTCCSEEEEETTCSSGGGTTTHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHhCCcc-CCH-----HHHHHHHHcCCceEEEEcCCCChHHHHHHHHHHHHHcCCCEEEE
Confidence 35566677777788864 565 77888888888777777777766443456889999999997543
No 171
>1rlg_A 50S ribosomal protein L7AE; protein-RNA, structural protein/RNA complex; HET: 5BU; 2.70A {Archaeoglobus fulgidus} SCOP: d.79.3.1
Probab=51.40 E-value=35 Score=24.22 Aligned_cols=65 Identities=12% Similarity=0.151 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEe
Q 025159 150 FKSVWEAMEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAY 220 (257)
Q Consensus 150 ~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~ 220 (257)
.+.+.+.|....+.|++. .|+ .+..+.++.......+.--+.++......+...|++++|+++-.
T Consensus 12 ~~~i~~~L~lA~kag~l~-~G~-----~~v~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~~ 76 (119)
T 1rlg_A 12 QNEALSLLEKVRESGKVK-KGT-----NETTKAVERGLAKLVYIAEDVDPPEIVAHLPLLCEEKNVPYIYV 76 (119)
T ss_dssp HHHHHHHHHHHHHHSEEE-ESH-----HHHHHHHTTTCCSEEEEESCCSCSTTTTHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHHhCCee-ECH-----HHHHHHHHcCCCcEEEEeCCCChHHHHHHHHHHHHHcCCCEEEe
Confidence 345667777777888864 565 77888888877777777777776554567889999999997543
No 172
>3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A
Probab=51.03 E-value=1e+02 Score=27.14 Aligned_cols=147 Identities=12% Similarity=0.034 Sum_probs=89.0
Q ss_pred CChhHHHHHHHHHHH-cCCceeeCCCCCCC-hHH--HHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHH
Q 025159 37 SGSETTKLAILEAMK-LGYRHFDTATLYQT-EQP--LGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSL 112 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~-~Gi~~~DtA~~Yg~-e~~--lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL 112 (257)
.++++..+..+.+++ .|++.|=.--...+ +.- .=+++|+.+ +++-|..-.. ..++++. ..+.+
T Consensus 187 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~rv~avRea~--------pd~~L~vDaN-~~w~~~~----Ai~~~ 253 (441)
T 3vc5_A 187 LDPDGIVAQARLLIGEYGFRSIKLKGGVFPPEQEAEAIQALRDAF--------PGLPLRLDPN-AAWTVET----SIRVG 253 (441)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSSSCHHHHHHHHHHHHHHS--------TTCCEEEECT-TCSCHHH----HHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCCCHHHHHHHHHHHHHhC--------CCCcEeccCC-CCCCHHH----HHHHH
Confidence 467777788888886 59997743222211 222 234566652 3333333322 2233332 23445
Q ss_pred HhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe-eEEEecCCCHHHHHHHHHhCCCCCc
Q 025159 113 ENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT-KAIGVSNFSCKKLGDILATAKIPPA 191 (257)
Q Consensus 113 ~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~p~ 191 (257)
++|. ++ +.++..|.. -++.|.++++.-.| -+.|=|-++...+.++++...++
T Consensus 254 ~~L~-~~--l~~iEeP~~----------------------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~d-- 306 (441)
T 3vc5_A 254 RALD-GV--LEYLEDPTP----------------------GIDGMARVAAEVPMPLATNMCVVTPEHLPAAVERRPIG-- 306 (441)
T ss_dssp HHTT-TT--CSEEECCSS----------------------SHHHHHHHHTTSSSCEEESSSCCSGGGHHHHHHHCCCS--
T ss_pred HHHH-HH--HHHhhccCC----------------------CHHHHHHHHhcCCCCEEeCCCCCCHHHHHHHHHhCCCC--
Confidence 5565 33 777888731 14567777765443 35677788889999998877665
Q ss_pred eeccccCCCC---CcHHHHHHHHHCCceEEEecCC
Q 025159 192 ANQVEMNPLW---QQNKLREFCKAKDIQLAAYAPL 223 (257)
Q Consensus 192 ~~q~~~~~~~---~~~~~~~~~~~~gi~v~~~~pl 223 (257)
++|....-+. ....+.+.|+++|+.+..++..
T Consensus 307 ii~~d~~~~GGitea~kia~lA~~~gv~v~~h~~~ 341 (441)
T 3vc5_A 307 VLLIDHHYWGGLVRSAHIATLCATFGIELSMHSNS 341 (441)
T ss_dssp EEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCCS
T ss_pred EEeechhhcCCHHHHHHHHHHHHHcCCEEEecCCc
Confidence 7776554322 2367999999999999988765
No 173
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=51.01 E-value=37 Score=23.28 Aligned_cols=62 Identities=6% Similarity=0.020 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEe
Q 025159 152 SVWEAMEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAY 220 (257)
Q Consensus 152 ~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~ 220 (257)
.++..|.-.++.|++. .|. .+..+.++......++.-.+.++. ....+..+|++++|+++.+
T Consensus 6 ki~~~L~la~kagk~v-~G~-----~~v~kai~~gka~lViiA~D~~~~-~~~~i~~~c~~~~vp~~~~ 67 (101)
T 3v7q_A 6 EWFPLLGLANRARKVV-SGE-----DLVIKEIRNARAKLVLLTEDASSN-TAKKVTDKCNYYKVPYKKV 67 (101)
T ss_dssp THHHHHHHHHHTTCEE-ESH-----HHHHHHHHTTCCSEEEEETTSCHH-HHHHHHHHHHHTTCCEEEE
T ss_pred hhHHHhhhhhhhhhcc-cch-----hhhHHHHhcCceeEEEEecccccc-chhhhcccccccCCCeeee
Confidence 4677788889999975 565 778888888887777776665543 3356788899999999876
No 174
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=50.68 E-value=1.2e+02 Score=26.03 Aligned_cols=151 Identities=11% Similarity=-0.011 Sum_probs=87.4
Q ss_pred ChhHHHHHHHHHHH-cCCceeeCCCCCCC---hHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHH
Q 025159 38 GSETTKLAILEAMK-LGYRHFDTATLYQT---EQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLE 113 (257)
Q Consensus 38 ~~~~~~~~l~~Al~-~Gi~~~DtA~~Yg~---e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~ 113 (257)
+.++..+....+++ .|++.|-.--.... +...=+++|+.+ -+++-|...... .++++...+ +-+.|+
T Consensus 148 ~~~~~~~~~~~~~~~~G~~~~KiKvg~~~~~~d~~~v~avR~a~-------g~~~~l~vDaN~-~~~~~~A~~-~~~~l~ 218 (382)
T 3dgb_A 148 DTAKDIAEAQKMLDLRRHRIFKLKIGAGEVDRDLAHVIAIKKAL-------GDSASVRVDVNQ-AWDEAVALR-ACRILG 218 (382)
T ss_dssp CHHHHHHHHHHHHHTTSCSEEEEECCSSCHHHHHHHHHHHHHHH-------GGGSEEEEECTT-CBCHHHHHH-HHHHHH
T ss_pred ChHHHHHHHHHHHHhCCCCEEEEeeCCCCHHHHHHHHHHHHHHc-------CCCCeEEEeCCC-CCCHHHHHH-HHHHHh
Confidence 44555555566676 69998854322211 222233455542 244555555432 334443322 234455
Q ss_pred hhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe-eEEEecCCCHHHHHHHHHhCCCCCce
Q 025159 114 NLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT-KAIGVSNFSCKKLGDILATAKIPPAA 192 (257)
Q Consensus 114 ~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~p~~ 192 (257)
.++ +.++..|... +-++.+.++++.-.| -..|=+-++...+.++++...++ +
T Consensus 219 ~~~-----i~~iEqP~~~--------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~~~d--~ 271 (382)
T 3dgb_A 219 GNG-----IDLIEQPISR--------------------NNRAGMVRLNASSPAPIMADESIECVEDAFNLAREGAAS--V 271 (382)
T ss_dssp TTT-----CCCEECCBCT--------------------TCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCS--E
T ss_pred hcC-----cCeeeCCCCc--------------------cCHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCCC--E
Confidence 544 4455666321 125666677765444 35567788999999998876655 6
Q ss_pred eccccCCCC---CcHHHHHHHHHCCceEEEecCCC
Q 025159 193 NQVEMNPLW---QQNKLREFCKAKDIQLAAYAPLG 224 (257)
Q Consensus 193 ~q~~~~~~~---~~~~~~~~~~~~gi~v~~~~pl~ 224 (257)
+|...+-+. .-..+.+.|+++|+.++..+.+.
T Consensus 272 v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~e 306 (382)
T 3dgb_A 272 FALKIAKNGGPRATLRTAAIAEAAGIGLYGGTMLE 306 (382)
T ss_dssp EEECHHHHTSHHHHHHHHHHHHHHTCEEEECCSCC
T ss_pred EEecccccCCHHHHHHHHHHHHHcCCeEeecCCCc
Confidence 666654332 23678899999999998876654
No 175
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=49.66 E-value=24 Score=24.24 Aligned_cols=61 Identities=8% Similarity=0.052 Sum_probs=42.0
Q ss_pred HHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEe
Q 025159 153 VWEAMEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAY 220 (257)
Q Consensus 153 ~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~ 220 (257)
+...|...++.|++. .|+ .+..+.++.......+.-.+ .+-+....+..+|++++|+++.|
T Consensus 4 i~~~L~la~kagkl~-~G~-----~~v~kai~~gka~lViiA~D-~~~~~~~~l~~~c~~~~vp~~~~ 64 (101)
T 1w41_A 4 FAFELRKAQDTGKIV-MGA-----RKSIQYAKMGGAKLIIVARN-ARPDIKEDIEYYARLSGIPVYEF 64 (101)
T ss_dssp HHHHHHHHHHHSEEE-ESH-----HHHHHHHHHTCCSEEEEETT-SCHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHcCCEe-ECH-----HHHHHHHHcCCCcEEEEeCC-CCHHHHHHHHHHHHhcCCCEEEe
Confidence 345666777788874 565 67778888777776666555 22222367888999999998876
No 176
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=48.94 E-value=84 Score=26.86 Aligned_cols=86 Identities=12% Similarity=0.059 Sum_probs=54.2
Q ss_pred HHHHHcCCeeEEEecCCCHHHHHHHHHhCCCC-------------CceeccccCCCCCcHHHHHHHHHCCceEEEecCCC
Q 025159 158 EECQNLGYTKAIGVSNFSCKKLGDILATAKIP-------------PAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLG 224 (257)
Q Consensus 158 ~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~-------------p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~ 224 (257)
..+.+...++-++|++-+++..+++.+..+++ ++++-+ ..+-....++...|-++|+.|+.=.|++
T Consensus 20 ~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~ell~~~~vD~V~i-~tp~~~H~~~~~~al~aGk~Vl~EKP~a 98 (387)
T 3moi_A 20 PAMRHHPDAQIVAACDPNEDVRERFGKEYGIPVFATLAEMMQHVQMDAVYI-ASPHQFHCEHVVQASEQGLHIIVEKPLT 98 (387)
T ss_dssp HHHHHCTTEEEEEEECSCHHHHHHHHHHHTCCEESSHHHHHHHSCCSEEEE-CSCGGGHHHHHHHHHHTTCEEEECSCCC
T ss_pred HHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeECCHHHHHcCCCCCEEEE-cCCcHHHHHHHHHHHHCCCceeeeCCcc
Confidence 34445566788888888877766654433322 111111 1111123567888899999999999998
Q ss_pred CCCCCCCCCCccChHHHHHHHHHhCCCc
Q 025159 225 ARGTIWGSNRVMECEVLKEIAEAKGKTV 252 (257)
Q Consensus 225 ~~G~l~~~~~~~~~~~~~~ia~~~~~s~ 252 (257)
. .......+.+.|++.|+..
T Consensus 99 ~--------~~~e~~~l~~~a~~~g~~~ 118 (387)
T 3moi_A 99 L--------SRDEADRMIEAVERAGVHL 118 (387)
T ss_dssp S--------CHHHHHHHHHHHHHHTCCE
T ss_pred C--------CHHHHHHHHHHHHHhCCeE
Confidence 6 3445677788888887643
No 177
>3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, nysgrc, L-rhamnonate dehydratase,target PSI-2; HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB: 2oz3_A*
Probab=48.67 E-value=74 Score=27.81 Aligned_cols=66 Identities=11% Similarity=-0.008 Sum_probs=47.5
Q ss_pred HHHHHHHHHcCCe---eEEEecCCCHHHHHHHHHhCCCCCceeccccCCCC---CcHHHHHHHHHCCceEEEec
Q 025159 154 WEAMEECQNLGYT---KAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLW---QQNKLREFCKAKDIQLAAYA 221 (257)
Q Consensus 154 ~~~l~~l~~~G~i---r~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~---~~~~~~~~~~~~gi~v~~~~ 221 (257)
++.+.+|++.-.+ -+.|=+.++...+.++++...++ ++|...+-+. .-..+.+.|+++|+.++.++
T Consensus 250 ~~~~a~l~~~~~~pi~Ia~gE~~~~~~~~~~li~~~a~d--ii~~d~~~~GGitea~kia~lA~a~gv~v~~h~ 321 (404)
T 3ekg_A 250 YWGYAELRRNAPTGMMVTTGEHEATRWGFRMLLEMGCCD--IIQPDVGWCGGVTELLKISALADAHNALVVPHG 321 (404)
T ss_dssp HHHHHHHHHHSCTTCEEEECTTCCHHHHHHHHHHTTCCS--EECCCTTTTTHHHHHHHHHHHHHHTTCEECCCC
T ss_pred HHHHHHHHHhcCCCeEEEecCccCCHHHHHHHHHcCCCC--eEecChhhcCCccHHHHHHHHHHHcCCEEEecC
Confidence 4566677765443 35677788889999998876655 7777765432 13678999999999998654
No 178
>3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae}
Probab=48.23 E-value=1.1e+02 Score=27.11 Aligned_cols=95 Identities=12% Similarity=0.106 Sum_probs=58.4
Q ss_pred ChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHc-C-CeeEEEecCC--C
Q 025159 100 HRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNL-G-YTKAIGVSNF--S 175 (257)
Q Consensus 100 ~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-G-~ir~iGvs~~--~ 175 (257)
+++...+-+++.|+. .++++|..|.+.. -|+.+.+|.+. | .|.-+|=-.+ +
T Consensus 290 t~~eai~~~~~lle~-----y~i~~IEdPl~~d--------------------D~eg~~~L~~~~~~~ipI~gDE~~~tn 344 (449)
T 3uj2_A 290 ASEELVAHWKSLCER-----YPIVSIEDGLDEE--------------------DWEGWQYMTRELGDKIQLVGDDLFVTN 344 (449)
T ss_dssp EHHHHHHHHHHHHHH-----SCEEEEESCSCTT--------------------CHHHHHHHHHHHTTTSEEEESTTTTTC
T ss_pred CHHHHHHHHHHHHHh-----cCceEEECCCCcc--------------------hHHHHHHHHHHhCCCceEECCcceeCC
Confidence 344444444455554 3688899885422 24455555553 2 5654554343 6
Q ss_pred HHHHHHHHHhCCCCCceeccccCCCCC---cHHHHHHHHHCCceEEEec
Q 025159 176 CKKLGDILATAKIPPAANQVEMNPLWQ---QNKLREFCKAKDIQLAAYA 221 (257)
Q Consensus 176 ~~~l~~~~~~~~~~p~~~q~~~~~~~~---~~~~~~~~~~~gi~v~~~~ 221 (257)
++.+.++++....+ ++|+..+-+.- ...+.+.|+++|++++...
T Consensus 345 ~~~~~~~i~~~a~d--~i~iKv~~iGGiTea~kia~lA~~~Gi~~~v~H 391 (449)
T 3uj2_A 345 TERLNKGIKERCGN--SILIKLNQIGTVSETLEAIKMAHKAGYTAVVSH 391 (449)
T ss_dssp HHHHHHHHHTTCCS--EEEECHHHHCSHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHcCCCC--EEEECccccCCHHHHHHHHHHHHHcCCeEEEeC
Confidence 99999998876655 66666553332 3678999999999955433
No 179
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=46.54 E-value=96 Score=26.11 Aligned_cols=88 Identities=14% Similarity=0.049 Sum_probs=57.7
Q ss_pred HHHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCC-------------CceeccccCCCCCcHHHHHHHHHCCceEEEecC
Q 025159 156 AMEECQNLGYTKAIGVSNFSCKKLGDILATAKIP-------------PAANQVEMNPLWQQNKLREFCKAKDIQLAAYAP 222 (257)
Q Consensus 156 ~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~-------------p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~p 222 (257)
-+..+.+...++-++|++-+++..+++.+..+++ ++++-+ ..+-....++...|-+.|+.|+.=.|
T Consensus 43 ~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i-~tp~~~h~~~~~~al~aGk~Vl~EKP 121 (350)
T 3rc1_A 43 ALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPVEGYPALLERDDVDAVYV-PLPAVLHAEWIDRALRAGKHVLAEKP 121 (350)
T ss_dssp HHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEEESHHHHHTCTTCSEEEE-CCCGGGHHHHHHHHHHTTCEEEEESS
T ss_pred HHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEE-CCCcHHHHHHHHHHHHCCCcEEEeCC
Confidence 3455666667888899999988877765543321 112211 11111235778888899999999999
Q ss_pred CCCCCCCCCCCCccChHHHHHHHHHhCCCc
Q 025159 223 LGARGTIWGSNRVMECEVLKEIAEAKGKTV 252 (257)
Q Consensus 223 l~~~G~l~~~~~~~~~~~~~~ia~~~~~s~ 252 (257)
++. .......+.+.|++.|+..
T Consensus 122 ~a~--------~~~ea~~l~~~a~~~g~~~ 143 (350)
T 3rc1_A 122 LTT--------DRPQAERLFAVARERGLLL 143 (350)
T ss_dssp SCS--------SHHHHHHHHHHHHHTTCCE
T ss_pred CCC--------CHHHHHHHHHHHHHhCCEE
Confidence 986 3445677788888887643
No 180
>4h62_V Mediator of RNA polymerase II transcription subun; mediator complex, nucleus; HET: MES; 3.00A {Saccharomyces cerevisiae}
Probab=46.35 E-value=9.1 Score=19.67 Aligned_cols=18 Identities=28% Similarity=0.582 Sum_probs=10.1
Q ss_pred EEecCCCHHHHHHHHHhC
Q 025159 169 IGVSNFSCKKLGDILATA 186 (257)
Q Consensus 169 iGvs~~~~~~l~~~~~~~ 186 (257)
-||..|+..+++++++.+
T Consensus 4 sgvtrfdekqieelldnc 21 (31)
T 4h62_V 4 SGVTRFDEKQIEELLDNC 21 (31)
T ss_dssp ------CHHHHHHHHHHH
T ss_pred CccccccHHHHHHHHHHH
Confidence 478889999999988764
No 181
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=46.17 E-value=1.3e+02 Score=24.96 Aligned_cols=85 Identities=8% Similarity=0.005 Sum_probs=54.6
Q ss_pred HHHHHcCCeeEEEecCCCHHHHHHHHHhCCCC------------CceeccccCCCCCcHHHHHHHHHCCceEEEecCCCC
Q 025159 158 EECQNLGYTKAIGVSNFSCKKLGDILATAKIP------------PAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGA 225 (257)
Q Consensus 158 ~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~------------p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~ 225 (257)
..+.+...++-+++++-+++..+++.+...++ ++++-+ ..+-....++...|-++|+.|+.-.|++.
T Consensus 20 ~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i-~tp~~~h~~~~~~al~~gk~v~~EKP~~~ 98 (331)
T 4hkt_A 20 KAVSGNADARLVAVADAFPAAAEAIAGAYGCEVRTIDAIEAAADIDAVVI-CTPTDTHADLIERFARAGKAIFCEKPIDL 98 (331)
T ss_dssp HHHHHCTTEEEEEEECSSHHHHHHHHHHTTCEECCHHHHHHCTTCCEEEE-CSCGGGHHHHHHHHHHTTCEEEECSCSCS
T ss_pred HHHhhCCCcEEEEEECCCHHHHHHHHHHhCCCcCCHHHHhcCCCCCEEEE-eCCchhHHHHHHHHHHcCCcEEEecCCCC
Confidence 34555566788899998888877765544321 111111 11111225677888899999999999976
Q ss_pred CCCCCCCCCccChHHHHHHHHHhCCC
Q 025159 226 RGTIWGSNRVMECEVLKEIAEAKGKT 251 (257)
Q Consensus 226 ~G~l~~~~~~~~~~~~~~ia~~~~~s 251 (257)
.......+.+.|++.|+.
T Consensus 99 --------~~~~~~~l~~~a~~~g~~ 116 (331)
T 4hkt_A 99 --------DAERVRACLKVVSDTKAK 116 (331)
T ss_dssp --------SHHHHHHHHHHHHHTTCC
T ss_pred --------CHHHHHHHHHHHHHcCCe
Confidence 344557778888888764
No 182
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=45.30 E-value=99 Score=25.86 Aligned_cols=86 Identities=16% Similarity=0.157 Sum_probs=55.5
Q ss_pred HHHHHHc-CCeeEEEecCCCHHHHHHHHHhCCCC--------------CceeccccCCCCCcHHHHHHHHHCCceEEEec
Q 025159 157 MEECQNL-GYTKAIGVSNFSCKKLGDILATAKIP--------------PAANQVEMNPLWQQNKLREFCKAKDIQLAAYA 221 (257)
Q Consensus 157 l~~l~~~-G~ir~iGvs~~~~~~l~~~~~~~~~~--------------p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~ 221 (257)
+..+.+. ..++-++|++-+++..+++.+..++. ++++-+ .++-....++...|-++|+.|+.=+
T Consensus 35 ~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i-~tp~~~H~~~~~~al~aGkhVl~EK 113 (340)
T 1zh8_A 35 LPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDL-TLPVELNLPFIEKALRKGVHVICEK 113 (340)
T ss_dssp HHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEE-CCCGGGHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEE-eCCchHHHHHHHHHHHCCCcEEEeC
Confidence 3445555 56888899999988877765543321 111111 1111112577888889999999999
Q ss_pred CCCCCCCCCCCCCccChHHHHHHHHHhCCC
Q 025159 222 PLGARGTIWGSNRVMECEVLKEIAEAKGKT 251 (257)
Q Consensus 222 pl~~~G~l~~~~~~~~~~~~~~ia~~~~~s 251 (257)
|++. +......+.+.|++.|+.
T Consensus 114 Pla~--------~~~ea~~l~~~a~~~g~~ 135 (340)
T 1zh8_A 114 PIST--------DVETGKKVVELSEKSEKT 135 (340)
T ss_dssp SSSS--------SHHHHHHHHHHHHHCSSC
T ss_pred CCCC--------CHHHHHHHHHHHHHcCCe
Confidence 9986 344557778888887764
No 183
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=45.02 E-value=1.1e+02 Score=25.50 Aligned_cols=85 Identities=12% Similarity=0.056 Sum_probs=54.7
Q ss_pred HHHHHcCCeeEEEecCCCHHHHHHHHHhCCCC--------------CceeccccCCCCCcHHHHHHHHHCCceEEEecCC
Q 025159 158 EECQNLGYTKAIGVSNFSCKKLGDILATAKIP--------------PAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPL 223 (257)
Q Consensus 158 ~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~--------------p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl 223 (257)
..+.+.+.++-++|++-+++..+++.+..+++ ++++- -..+-....++...|-+.|+.|+.=.|+
T Consensus 22 ~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~-i~tp~~~h~~~~~~al~~gk~vl~EKP~ 100 (330)
T 3e9m_A 22 AGLRESAQAEVRGIASRRLENAQKMAKELAIPVAYGSYEELCKDETIDIIY-IPTYNQGHYSAAKLALSQGKPVLLEKPF 100 (330)
T ss_dssp HHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCBSSHHHHHHCTTCSEEE-ECCCGGGHHHHHHHHHHTTCCEEECSSC
T ss_pred HHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCceeCCHHHHhcCCCCCEEE-EcCCCHHHHHHHHHHHHCCCeEEEeCCC
Confidence 34555566888899998888877776654432 11110 0011111256777888999999999999
Q ss_pred CCCCCCCCCCCccChHHHHHHHHHhCCC
Q 025159 224 GARGTIWGSNRVMECEVLKEIAEAKGKT 251 (257)
Q Consensus 224 ~~~G~l~~~~~~~~~~~~~~ia~~~~~s 251 (257)
+. .......+.+.|++.|+.
T Consensus 101 ~~--------~~~e~~~l~~~a~~~g~~ 120 (330)
T 3e9m_A 101 TL--------NAAEAEELFAIAQEQGVF 120 (330)
T ss_dssp CS--------SHHHHHHHHHHHHHTTCC
T ss_pred CC--------CHHHHHHHHHHHHHcCCe
Confidence 76 344456777788887763
No 184
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=44.83 E-value=1.5e+02 Score=27.14 Aligned_cols=80 Identities=10% Similarity=-0.075 Sum_probs=53.2
Q ss_pred EEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCc--HHHHHHHHHCCceEEEecCCCCCCCCCCCCCc----cChHHH
Q 025159 168 AIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQ--NKLREFCKAKDIQLAAYAPLGARGTIWGSNRV----MECEVL 241 (257)
Q Consensus 168 ~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~--~~~~~~~~~~gi~v~~~~pl~~~G~l~~~~~~----~~~~~~ 241 (257)
-|.|-+++++.+++.++...-.+.+|-++. .. + .++++.++++|.+++.+..-+ - . +... ..-...
T Consensus 386 pisIDT~~~~v~eaal~~~~G~~iINdis~--~~-~~~~~~~~~~~~~g~~vV~m~~~~---~-~-p~t~~~~~~~l~~~ 457 (566)
T 1q7z_A 386 PLSLDIQNVDLTERALRAYPGRSLFNSAKV--DE-EELEMKINLLKKYGGTLIVLLMGK---D-V-PKSFEERKEYFEKA 457 (566)
T ss_dssp CEEEECCCHHHHHHHHHHCSSCCEEEEEES--CH-HHHHHHHHHHHHHCCEEEEESCSS---S-C-CCSHHHHHHHHHHH
T ss_pred eEEEeCCCHHHHHHHHHhcCCCCEEEECCc--ch-hhHHHHHHHHHHhCCeEEEEeCCC---C-C-cCCHHHHHHHHHHH
Confidence 488899999999999998654555664433 22 4 678999999999999986432 1 1 1111 112445
Q ss_pred HHHHHHhCCCccccc
Q 025159 242 KEIAEAKGKTVAQVL 256 (257)
Q Consensus 242 ~~ia~~~~~s~~qva 256 (257)
.+.|.++|++ .++.
T Consensus 458 ~~~a~~~Gi~-~~Ii 471 (566)
T 1q7z_A 458 LKILERHDFS-DRVI 471 (566)
T ss_dssp HHHHHHTTCG-GGEE
T ss_pred HHHHHHCCCC-CcEE
Confidence 5667788886 5543
No 185
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=44.18 E-value=1.2e+02 Score=25.20 Aligned_cols=67 Identities=10% Similarity=0.184 Sum_probs=51.1
Q ss_pred cHHHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEecC
Q 025159 149 DFKSVWEAMEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAP 222 (257)
Q Consensus 149 ~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~p 222 (257)
..+.+...++.+++++. -|.|-+++++.++++++... ..+| ..+.. ...++++.++++|++++.+.-
T Consensus 88 E~~Rv~pvI~~l~~~~v--piSIDT~~~~Va~aAl~aGa--~iIN--dVsg~-~d~~m~~v~a~~~~~vVlmh~ 154 (294)
T 2dqw_A 88 EKRRLLPVLEAVLSLGV--PVSVDTRKPEVAEEALKLGA--HLLN--DVTGL-RDERMVALAARHGVAAVVMHM 154 (294)
T ss_dssp HHHHHHHHHHHHHTTCS--CEEEECSCHHHHHHHHHHTC--SEEE--CSSCS-CCHHHHHHHHHHTCEEEEECC
T ss_pred HHHHHHHHHHHHHhCCC--eEEEECCCHHHHHHHHHhCC--CEEE--ECCCC-CChHHHHHHHHhCCCEEEEcC
Confidence 36677788888887643 38999999999999999743 2344 44444 556899999999999999864
No 186
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=43.62 E-value=1e+02 Score=25.69 Aligned_cols=86 Identities=12% Similarity=0.124 Sum_probs=55.1
Q ss_pred HHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCC--------------CceeccccCCCCCcHHHHHHHHHCCceEEEecC
Q 025159 157 MEECQNLGYTKAIGVSNFSCKKLGDILATAKIP--------------PAANQVEMNPLWQQNKLREFCKAKDIQLAAYAP 222 (257)
Q Consensus 157 l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~--------------p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~p 222 (257)
+..+.+...++-++|++-+++..+++.+...+. ++++=+ ..+-....++...|-+.|+.|+.-.|
T Consensus 18 ~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i-~tp~~~h~~~~~~al~~gk~v~~EKP 96 (344)
T 3ezy_A 18 AENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYKDPHELIEDPNVDAVLV-CSSTNTHSELVIACAKAKKHVFCEKP 96 (344)
T ss_dssp HHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEE-CSCGGGHHHHHHHHHHTTCEEEEESC
T ss_pred HHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeCCHHHHhcCCCCCEEEE-cCCCcchHHHHHHHHhcCCeEEEECC
Confidence 344555566788899998888877765543321 111110 01111125677788899999999999
Q ss_pred CCCCCCCCCCCCccChHHHHHHHHHhCCC
Q 025159 223 LGARGTIWGSNRVMECEVLKEIAEAKGKT 251 (257)
Q Consensus 223 l~~~G~l~~~~~~~~~~~~~~ia~~~~~s 251 (257)
++. .......+.+.|++.|+.
T Consensus 97 ~~~--------~~~e~~~l~~~a~~~g~~ 117 (344)
T 3ezy_A 97 LSL--------NLADVDRMIEETKKADVI 117 (344)
T ss_dssp SCS--------CHHHHHHHHHHHHHHTCC
T ss_pred CCC--------CHHHHHHHHHHHHHhCCc
Confidence 986 344557788888888863
No 187
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=43.50 E-value=1.2e+02 Score=26.10 Aligned_cols=84 Identities=11% Similarity=0.058 Sum_probs=55.1
Q ss_pred HHHcCCeeEEE-ecCCCHHHHHHHHHhCCCC---------------------CceeccccCCCCCcHHHHHHHHHCCceE
Q 025159 160 CQNLGYTKAIG-VSNFSCKKLGDILATAKIP---------------------PAANQVEMNPLWQQNKLREFCKAKDIQL 217 (257)
Q Consensus 160 l~~~G~ir~iG-vs~~~~~~l~~~~~~~~~~---------------------p~~~q~~~~~~~~~~~~~~~~~~~gi~v 217 (257)
+...+.++-++ |++-+++..+++.+..+++ ++++- -.++-....++...|-+.|+.|
T Consensus 34 ~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~-i~tp~~~H~~~~~~al~aGkhV 112 (398)
T 3dty_A 34 ALRDNTFVLVAGAFDIDPIRGSAFGEQLGVDSERCYADYLSMFEQEARRADGIQAVS-IATPNGTHYSITKAALEAGLHV 112 (398)
T ss_dssp HHGGGSEEEEEEECCSSHHHHHHHHHHTTCCGGGBCSSHHHHHHHHTTCTTCCSEEE-EESCGGGHHHHHHHHHHTTCEE
T ss_pred HhhCCCeEEEEEEeCCCHHHHHHHHHHhCCCcceeeCCHHHHHhcccccCCCCCEEE-ECCCcHHHHHHHHHHHHCCCeE
Confidence 45566677776 8888888887776655542 11110 0111112357888888999999
Q ss_pred EEecCCCCCCCCCCCCCccChHHHHHHHHHhCCCc
Q 025159 218 AAYAPLGARGTIWGSNRVMECEVLKEIAEAKGKTV 252 (257)
Q Consensus 218 ~~~~pl~~~G~l~~~~~~~~~~~~~~ia~~~~~s~ 252 (257)
+.=.|++. ++.....+.+.|++.|+..
T Consensus 113 l~EKPla~--------~~~ea~~l~~~a~~~g~~~ 139 (398)
T 3dty_A 113 VCEKPLCF--------TVEQAENLRELSHKHNRIV 139 (398)
T ss_dssp EECSCSCS--------CHHHHHHHHHHHHHTTCCE
T ss_pred EEeCCCcC--------CHHHHHHHHHHHHHcCCeE
Confidence 99999986 4445677888888887643
No 188
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=43.36 E-value=1.2e+02 Score=25.32 Aligned_cols=86 Identities=8% Similarity=0.070 Sum_probs=55.0
Q ss_pred HHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCC-------------CceeccccCCCCCcHHHHHHHHHCCceEEEecCC
Q 025159 157 MEECQNLGYTKAIGVSNFSCKKLGDILATAKIP-------------PAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPL 223 (257)
Q Consensus 157 l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~-------------p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl 223 (257)
+..+.+...++-++|++-+++..+++.+..+++ ++++-+ ..+-....++...|-++|+.|+.-.|+
T Consensus 21 ~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~D~V~i-~tp~~~h~~~~~~al~~gk~vl~EKP~ 99 (354)
T 3db2_A 21 ADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAGDATMEALLAREDVEMVII-TVPNDKHAEVIEQCARSGKHIYVEKPI 99 (354)
T ss_dssp HHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCCCSSHHHHHHCSSCCEEEE-CSCTTSHHHHHHHHHHTTCEEEEESSS
T ss_pred HHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEE-eCChHHHHHHHHHHHHcCCEEEEccCC
Confidence 344555556778889988888777665543322 111111 111122356778888999999999999
Q ss_pred CCCCCCCCCCCccChHHHHHHHHHhCCC
Q 025159 224 GARGTIWGSNRVMECEVLKEIAEAKGKT 251 (257)
Q Consensus 224 ~~~G~l~~~~~~~~~~~~~~ia~~~~~s 251 (257)
+. .......+.+.|++.|+.
T Consensus 100 ~~--------~~~~~~~l~~~a~~~~~~ 119 (354)
T 3db2_A 100 SV--------SLDHAQRIDQVIKETGVK 119 (354)
T ss_dssp CS--------SHHHHHHHHHHHHHHCCC
T ss_pred CC--------CHHHHHHHHHHHHHcCCe
Confidence 86 344557778888888764
No 189
>1vpq_A Hypothetical protein TM1631; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.1.32.1
Probab=42.81 E-value=1.4e+02 Score=24.50 Aligned_cols=99 Identities=12% Similarity=0.169 Sum_probs=56.1
Q ss_pred cCCccceeCCcCCC----C-Chh-HHHHHHHHHHH-cCCceeeCCC-CCC--ChHHHHHHHHHHHhCCCCCCCCcEEEEe
Q 025159 23 RMPVLGLGTAASPF----S-GSE-TTKLAILEAMK-LGYRHFDTAT-LYQ--TEQPLGDAIAEALSTGIIKSRDELFIAS 92 (257)
Q Consensus 23 ~vs~lglG~~~~~~----~-~~~-~~~~~l~~Al~-~Gi~~~DtA~-~Yg--~e~~lg~~l~~~~~~~~~~~R~~l~i~t 92 (257)
.+=.||+++|+... . +.. ...+.|....+ ..++.++.-. .|+ +.+.+.++.++. -+++..+.
T Consensus 12 ~~i~iG~sgW~~~~W~G~fYP~~~~~~~~L~~Ya~~~~F~tVEiNsTFY~~p~~~t~~~W~~~t--------P~~F~F~v 83 (273)
T 1vpq_A 12 HMVYVGTSGFSFEDWKGVVYPEHLKPSQFLKYYWAVLGFRIVELNFTYYTQPSWRSFVQMLRKT--------PPDFYFTV 83 (273)
T ss_dssp CEEEEEEBCSCCSTTBTTTBCTTCCGGGHHHHHHHTSCCCEEEECCCSSSSSCHHHHHHHHTTS--------CTTCEEEE
T ss_pred ceEEEECCCCCCCCcCcccCCCCCCchHHHHHHhCCCCCCeEEECccccCCCCHHHHHHHHHhC--------CCCeEEEE
Confidence 35567777777643 1 111 01233333332 1677776633 577 688888887753 48899999
Q ss_pred ccCCC---C-----CChhhHHHHHHHHHHhh--CCCcccEEEeecCCC
Q 025159 93 KLWCS---D-----AHRELVVPALQKSLENL--QLEYIDLYVIHWPVS 130 (257)
Q Consensus 93 K~~~~---~-----~~~~~i~~~l~~sL~~L--g~d~lDl~~lh~p~~ 130 (257)
|++.. . ...+...+.+-++++-| | +++..+++.-|-.
T Consensus 84 Ka~r~iTh~~~~~~~~~~~~~~~F~~~~~pL~~~-~kLG~vL~Q~Pps 130 (273)
T 1vpq_A 84 KTPGSVTHVLWKEGKDPKEDMENFTRQIEPLIEE-QRLKMTLAQFPFS 130 (273)
T ss_dssp ECCHHHHHTHHHHTCCSHHHHHHHHHHHHHHHHT-TCEEEEEEECCTT
T ss_pred EeChhhcccccccccchHHHHHHHHHHHHhhccC-CCEEEEEEEcCCC
Confidence 98641 0 01122233444556666 5 6778888877744
No 190
>2ptz_A Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypanosoma brucei} SCOP: c.1.11.1 d.54.1.1 PDB: 2ptx_A 2pty_A* 2ptw_A 2pu0_A 2pu1_A* 1oep_A
Probab=42.37 E-value=1.8e+02 Score=25.56 Aligned_cols=79 Identities=8% Similarity=0.080 Sum_probs=53.4
Q ss_pred cEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcC--CeeEEEecC--CCHHHHHHHHHhCCCCCceeccc
Q 025159 121 DLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLG--YTKAIGVSN--FSCKKLGDILATAKIPPAANQVE 196 (257)
Q Consensus 121 Dl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G--~ir~iGvs~--~~~~~l~~~~~~~~~~p~~~q~~ 196 (257)
++++|..|.... -|+.+.+|.++- .|.-+|=-. ++++.+.++++....+ ++|+.
T Consensus 289 ~i~~iEdPl~~~--------------------D~~g~~~l~~~~g~~ipI~gDe~~v~~~~~~~~~i~~~a~d--~i~ik 346 (432)
T 2ptz_A 289 PIVSIEDPYDQD--------------------DFAGFAGITEALKGKTQIVGDDLTVTNTERIKMAIEKKACN--SLLLK 346 (432)
T ss_dssp CEEEEECCSCTT--------------------CHHHHHHHHHHTTTTSEEEESTTTTTCHHHHHHHHHTTCCS--EEEEC
T ss_pred CceEEECCCCcc--------------------hHHHHHHHHHhcCCCCeEEecCcccCCHHHHHHHHHcCCCC--EEEec
Confidence 688999985421 255666666553 565555443 6899999998876655 66665
Q ss_pred cCCCCC---cHHHHHHHHHCCceEEEec
Q 025159 197 MNPLWQ---QNKLREFCKAKDIQLAAYA 221 (257)
Q Consensus 197 ~~~~~~---~~~~~~~~~~~gi~v~~~~ 221 (257)
.+-+.- ..++.+.|+++|++++..+
T Consensus 347 ~~~~GGitea~~i~~lA~~~g~~v~~~h 374 (432)
T 2ptz_A 347 INQIGTISEAIASSKLCMENGWSVMVSH 374 (432)
T ss_dssp HHHHCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred ccccCCHHHHHHHHHHHHHcCCeEEecC
Confidence 543322 3678999999999997543
No 191
>1jpd_X L-Ala-D/L-Glu epimerase; enolase superfamily, muconate lactonizing enzyme subgroup, alpha/beta barrel, structural genomics, isomerase; 2.60A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1
Probab=42.01 E-value=1.2e+02 Score=25.35 Aligned_cols=148 Identities=11% Similarity=0.006 Sum_probs=81.0
Q ss_pred ChhHHHHHHHHHHHcCCceeeCCCCCCChHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHhhCC
Q 025159 38 GSETTKLAILEAMKLGYRHFDTATLYQTEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLENLQL 117 (257)
Q Consensus 38 ~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~Lg~ 117 (257)
+.++..+.++.+++.|++.|=.--.-......=+++++. - .++.|..-... .++++...+-++ .|+.+
T Consensus 132 ~~e~~~~~a~~~~~~G~~~~KiKvg~~~d~~~v~avr~~-------~-~~~~l~vDaN~-~~~~~~a~~~~~-~l~~~-- 199 (324)
T 1jpd_X 132 TPDQMANSASTLWQAGAKLLKVKLDNHLISERMVAIRTA-------V-PDATLIVDANE-SWRAEGLAARCQ-LLADL-- 199 (324)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSSCHHHHHHHHHHH-------C-TTSEEEEECTT-CCCSTTHHHHHH-HHHHT--
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeCCchHHHHHHHHHHh-------C-CCCEEEEECcC-CCCHHHHHHHHH-HHHhC--
Confidence 567777778888899999874321111211222355655 2 23444444322 234444443332 45543
Q ss_pred CcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCCCceecccc
Q 025159 118 EYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAANQVEM 197 (257)
Q Consensus 118 d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~ 197 (257)
++.++..|..... ++.|.++. .+-=-..|=|-++...+.+++.. ..++|+..
T Consensus 200 ---~i~~iEqP~~~~d--------------------~~~~~~l~-~~ipIa~dE~~~~~~~~~~~~~~----~~~i~ik~ 251 (324)
T 1jpd_X 200 ---GVAMLEQPLPAQD--------------------DAALENFI-HPLPICADESCHTRSNLKALKGR----YEMVNIKL 251 (324)
T ss_dssp ---TCCEEECCSCTTS--------------------CGGGGSSC-CSSCEEESTTCSSGGGHHHHBTT----BSEEEECH
T ss_pred ---CCCEEECCCCCCC--------------------HHHHHhcc-CCCCEEEcCCCCCHHHHHHHHhh----CCEEEEcc
Confidence 6678888854211 11122221 22223456666778888877643 34666655
Q ss_pred CCCCC---cHHHHHHHHHCCceEEEecCCCC
Q 025159 198 NPLWQ---QNKLREFCKAKDIQLAAYAPLGA 225 (257)
Q Consensus 198 ~~~~~---~~~~~~~~~~~gi~v~~~~pl~~ 225 (257)
+-..- -..+.+.|+++|+.++..+.+..
T Consensus 252 ~~~GGit~~~~i~~~A~~~g~~~~~~~~~es 282 (324)
T 1jpd_X 252 DKTGGLTEALALATEARAQGFSLMLGCMLCT 282 (324)
T ss_dssp HHHTSHHHHHHHHHHHHHTTCEEEECCCSCC
T ss_pred hhhCcHHHHHHHHHHHHHcCCcEEEeCcchH
Confidence 43221 25789999999999999887754
No 192
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=42.00 E-value=1.6e+02 Score=24.82 Aligned_cols=127 Identities=13% Similarity=0.080 Sum_probs=67.0
Q ss_pred HHHHHHHHHHcCCceeeCC-------------------CCCC-C----hHHHHHHHHHHHhCCCCCCCCcEEEEeccCCC
Q 025159 42 TKLAILEAMKLGYRHFDTA-------------------TLYQ-T----EQPLGDAIAEALSTGIIKSRDELFIASKLWCS 97 (257)
Q Consensus 42 ~~~~l~~Al~~Gi~~~DtA-------------------~~Yg-~----e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~ 97 (257)
..+..+.|.++|+..+|.- +.|| + -+.+-+.++...+. - ++-|..|+.+.
T Consensus 146 ~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~----v--~~pv~vris~~ 219 (338)
T 1z41_A 146 FKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQV----W--DGPLFVRVSAS 219 (338)
T ss_dssp HHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHH----C--CSCEEEEEECC
T ss_pred HHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHH----c--CCcEEEEecCc
Confidence 3455566678999988732 2355 2 13334444433111 1 45577787443
Q ss_pred -----CCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEEec
Q 025159 98 -----DAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGVS 172 (257)
Q Consensus 98 -----~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs 172 (257)
..+.+.. ..+-+.|+..|+|||++ |....... ..+. .. ...++.+.++++.=.+--|++.
T Consensus 220 ~~~~~g~~~~~~-~~~a~~l~~~Gvd~i~v---~~~~~~~~---~~~~-----~~---~~~~~~~~~ir~~~~iPVi~~G 284 (338)
T 1z41_A 220 DYTDKGLDIADH-IGFAKWMKEQGVDLIDC---SSGALVHA---DINV-----FP---GYQVSFAEKIREQADMATGAVG 284 (338)
T ss_dssp CCSTTSCCHHHH-HHHHHHHHHTTCCEEEE---ECCCSSCC---CCCC-----CT---TTTHHHHHHHHHHHCCEEEECS
T ss_pred ccCCCCCCHHHH-HHHHHHHHHcCCCEEEE---ecCccccC---CCCC-----Cc---cchHHHHHHHHHHCCCCEEEEC
Confidence 2233333 34556677889776665 44321100 0000 00 0123444555554456678888
Q ss_pred CC-CHHHHHHHHHhCCCC
Q 025159 173 NF-SCKKLGDILATAKIP 189 (257)
Q Consensus 173 ~~-~~~~l~~~~~~~~~~ 189 (257)
.+ +++..+++++....+
T Consensus 285 gi~s~~~a~~~l~~G~aD 302 (338)
T 1z41_A 285 MITDGSMAEEILQNGRAD 302 (338)
T ss_dssp SCCSHHHHHHHHHTTSCS
T ss_pred CCCCHHHHHHHHHcCCce
Confidence 87 799999999876555
No 193
>2bas_A YKUI protein; EAL domain, structural genom protein structure initiative, midwest center for structural genomics, MCSG, signaling protein; 2.61A {Bacillus subtilis} SCOP: c.1.33.1 d.110.6.2 PDB: 2w27_A*
Probab=41.96 E-value=90 Score=27.32 Aligned_cols=115 Identities=12% Similarity=0.141 Sum_probs=66.3
Q ss_pred CcEEEEeccCCCCCChhhHHHH--HHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHc
Q 025159 86 DELFIASKLWCSDAHRELVVPA--LQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNL 163 (257)
Q Consensus 86 ~~l~i~tK~~~~~~~~~~i~~~--l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 163 (257)
....++..+.+.......+... +.+.|++.++. .+-+.+.-.+... ..+.+.+.+.+..|++.
T Consensus 105 ~~~~l~iNls~~~l~~~~~~~~~~l~~~l~~~~~~-~~~l~lEItE~~~--------------~~~~~~~~~~l~~Lr~~ 169 (431)
T 2bas_A 105 SDLLIFMNQDANLLMLDHGESFLELLKEYEAKGIE-LHRFVLEITEHNF--------------EGDIEQLYHMLAYYRTY 169 (431)
T ss_dssp TTCEEEEECCHHHHGGGTTHHHHHHHHHHHHTTCC-GGGEEEEECCTTC--------------CSCHHHHHHHHHHHHTT
T ss_pred CCCeEEEEECHHHHCCcccccHHHHHHHHHHcCCC-CCeEEEEEECChh--------------hCCHHHHHHHHHHHHHC
Confidence 4556666665433222334444 77888888875 3445555443211 12367889999999999
Q ss_pred CCeeEE---EecCCCHHHHHHHHHhCCCCCceeccccCCCCC-----c-----HHHHHHHHHCCceEEEec
Q 025159 164 GYTKAI---GVSNFSCKKLGDILATAKIPPAANQVEMNPLWQ-----Q-----NKLREFCKAKDIQLAAYA 221 (257)
Q Consensus 164 G~ir~i---Gvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~-----~-----~~~~~~~~~~gi~v~~~~ 221 (257)
|---+| |....+...|..+ +|+.+-+.-+.... . ..++..|++.|+.+++-+
T Consensus 170 G~~ialDDFG~g~ssl~~L~~l------~~d~iKID~s~v~~~~~~~~~~~il~~ii~la~~lg~~vvAEG 234 (431)
T 2bas_A 170 GIKIAVDNIGKESSNLDRIALL------SPDLLKIDLQALKVSQPSPSYEHVLYSISLLARKIGAALLYED 234 (431)
T ss_dssp TCEEEEEEETTTBCCHHHHHHH------CCSEEEEECTTTC----CCHHHHHHHHHHHHHHHHTCEEEEEC
T ss_pred CCEEEEECCCCCcHHHHHHHhC------CCCEEEECHHHHhhhhcCHhHHHHHHHHHHHHHHcCCEEEEEe
Confidence 985433 4333344444443 22233333332221 1 467888999999999865
No 194
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=41.61 E-value=26 Score=21.69 Aligned_cols=19 Identities=21% Similarity=0.275 Sum_probs=17.3
Q ss_pred cHHHHHHHHHHHHHcCCee
Q 025159 149 DFKSVWEAMEECQNLGYTK 167 (257)
Q Consensus 149 ~~~~~~~~l~~l~~~G~ir 167 (257)
..+++++.|..|.++|.|+
T Consensus 38 ~kdeV~~~LrrLe~KGLI~ 56 (59)
T 2xvc_A 38 EKQEVVKLLEALKNKGLIA 56 (59)
T ss_dssp CHHHHHHHHHHHHHTTSEE
T ss_pred CHHHHHHHHHHHHHCCCee
Confidence 3689999999999999997
No 195
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=40.94 E-value=1.8e+02 Score=25.36 Aligned_cols=67 Identities=10% Similarity=0.078 Sum_probs=47.1
Q ss_pred HHHHHHHHHcCCe-eEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCC---cHHHHHHHHHCCceEEEecC
Q 025159 154 WEAMEECQNLGYT-KAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQ---QNKLREFCKAKDIQLAAYAP 222 (257)
Q Consensus 154 ~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~---~~~~~~~~~~~gi~v~~~~p 222 (257)
++.+.++++.-.| -..|=+-++++.+.++++...++ ++|...+-+.- -..+.+.|+++|+.+..+++
T Consensus 268 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ga~d--~v~~k~~~~GGit~~~~ia~~A~~~gi~v~~h~~ 338 (426)
T 4e4f_A 268 QACFRLIRQHTVTPIAVGEVFNSIWDCKQLIEEQLID--YIRTTITHAGGITGMRRIADFASLYQVRTGSHGP 338 (426)
T ss_dssp GGGGHHHHTTCCSCEEECTTCCSGGGTHHHHHTTCCS--EECCCTTTTTHHHHHHHHHHHHHTTTCEEEECCC
T ss_pred HHHHHHHHhcCCCCEEeCCCcCCHHHHHHHHHcCCCC--EEEeCccccCCHHHHHHHHHHHHHcCCEEeeeCC
Confidence 3556667765544 34555677888899998876655 77777654432 26789999999999987764
No 196
>2h9a_A Carbon monoxide dehydrogenase corrinoid/iron- sulfur protein, gamma subunit; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_A*
Probab=40.91 E-value=1.6e+02 Score=26.08 Aligned_cols=85 Identities=14% Similarity=0.108 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHc-CCeeEEEecCCCHHHHHHHHHhCC-CCCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCC
Q 025159 150 FKSVWEAMEECQNL-GYTKAIGVSNFSCKKLGDILATAK-IPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARG 227 (257)
Q Consensus 150 ~~~~~~~l~~l~~~-G~ir~iGvs~~~~~~l~~~~~~~~-~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G 227 (257)
.+.....++..++. +.- +.+. ++++.+++.++.+. -+|.++-+.-. .-..+.+.++++|.++++.++
T Consensus 140 pe~~~~~Vk~V~e~~dvP--lsID-~dp~vleaale~~~d~~pLIns~t~e---n~~~~~~la~~y~~~vV~~~~----- 208 (445)
T 2h9a_A 140 AATFAKAVATAREVTDLP--FILI-GTPEQLAAALETEGANNPLLYAATAD---NYEQMVELAKKYNVPLTVSAK----- 208 (445)
T ss_dssp HHHHHHHHHHHHHHCCSC--EEEE-SCHHHHHHHHHHHGGGCCEEEEECTT---THHHHHHHHHHHTCCEEEECS-----
T ss_pred HHHHHHHHHHHHHhcCCC--EEEE-CCHHHHHHHHHhcCCCCCEEEECCHH---HHHHHHHHHHHhCCeEEEEcC-----
Confidence 44555555555554 433 4555 99999999998875 66777654432 126889999999999998543
Q ss_pred CCCCCCCccChHHHHHHHHHhCCC
Q 025159 228 TIWGSNRVMECEVLKEIAEAKGKT 251 (257)
Q Consensus 228 ~l~~~~~~~~~~~~~~ia~~~~~s 251 (257)
.+..-..+.+.+.++|+.
T Consensus 209 ------~l~~l~~lv~~a~~~Gi~ 226 (445)
T 2h9a_A 209 ------GLDALAELVQKITALGYK 226 (445)
T ss_dssp ------SHHHHHHHHHHHHHTTCC
T ss_pred ------CHHHHHHHHHHHHHCCCC
Confidence 122346666777777764
No 197
>2aif_A Ribosomal protein L7A; high-mobility like protein, transcription factor, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum} SCOP: d.79.3.1
Probab=40.78 E-value=45 Score=24.31 Aligned_cols=65 Identities=12% Similarity=0.107 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEe
Q 025159 150 FKSVWEAMEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAY 220 (257)
Q Consensus 150 ~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~ 220 (257)
...+...|...++.|++. .|+ .+..+.++.......+.--+.++...-..+...|++++|+++-+
T Consensus 26 ~~ki~~~L~lA~kagklv-~G~-----~~v~kal~~gkaklViiA~D~~~~~~~~~l~~lc~~~~IP~~~v 90 (135)
T 2aif_A 26 NNKIINLVQQACNYKQLR-KGA-----NEATKALNRGIAEIVLLAADAEPLEILLHLPLVCEDKNTPYVFV 90 (135)
T ss_dssp HHHHHHHHHHHHHTTCEE-ESH-----HHHHHHHHTTCEEEEEEETTCSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHHcCCcc-cCH-----HHHHHHHHcCCCeEEEEecCCChHHHHhHHHHHHHhcCCcEEEE
Confidence 346777788888899875 565 67788888777666666555554322256889999999999755
No 198
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=40.72 E-value=94 Score=24.44 Aligned_cols=71 Identities=11% Similarity=0.047 Sum_probs=45.7
Q ss_pred cHHHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCC-------cHHHHHHHHHCCceEEEec
Q 025159 149 DFKSVWEAMEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQ-------QNKLREFCKAKDIQLAAYA 221 (257)
Q Consensus 149 ~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~-------~~~~~~~~~~~gi~v~~~~ 221 (257)
+.+++++...+--++.-|++|=|.+.+-+....+++...-+ ++-+.++..+. +.+..+..++.|+.|+..+
T Consensus 35 NT~~tl~la~era~e~~Ik~iVVASssG~TA~k~~e~~~~~--lVvVTh~~GF~~pg~~e~~~e~~~~L~~~G~~V~t~t 112 (206)
T 1t57_A 35 NTERVLELVGERADQLGIRNFVVASVSGETALRLSEMVEGN--IVSVTHHAGFREKGQLELEDEARDALLERGVNVYAGS 112 (206)
T ss_dssp GHHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHTTCCSE--EEEECCCTTSSSTTCCSSCHHHHHHHHHHTCEEECCS
T ss_pred cHHHHHHHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHccCC--EEEEeCcCCCCCCCCCcCCHHHHHHHHhCCCEEEEee
Confidence 45666665555444555999999888777777776644112 33233333222 3789999999999998754
No 199
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=40.62 E-value=50 Score=26.96 Aligned_cols=94 Identities=15% Similarity=0.076 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHHHcCC-eeEEEecCCC---------------------HHHHHHHHHhCCC-CCceeccccCCCCC--cH
Q 025159 150 FKSVWEAMEECQNLGY-TKAIGVSNFS---------------------CKKLGDILATAKI-PPAANQVEMNPLWQ--QN 204 (257)
Q Consensus 150 ~~~~~~~l~~l~~~G~-ir~iGvs~~~---------------------~~~l~~~~~~~~~-~p~~~q~~~~~~~~--~~ 204 (257)
.+.+++.+..|.+.|- +--+|+---+ ...+-++++..+- .|.+...-||+..+ ..
T Consensus 27 ~~~t~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~~Pivlm~Y~N~i~~~G~e 106 (252)
T 3tha_A 27 LQTSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKTKKALVFMVYYNLIFSYGLE 106 (252)
T ss_dssp HHHHHHHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCCSSEEEEECCHHHHHHHCHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhcCCCEEEEeccCHHHHhhHH
Confidence 7888899999999884 7788976433 3343334443332 36666666776654 26
Q ss_pred HHHHHHHHCCceEEEecCCCCCCCCCCCCCccChHHHHHHHHHhCCCcc
Q 025159 205 KLREFCKAKDIQLAAYAPLGARGTIWGSNRVMECEVLKEIAEAKGKTVA 253 (257)
Q Consensus 205 ~~~~~~~~~gi~v~~~~pl~~~G~l~~~~~~~~~~~~~~ia~~~~~s~~ 253 (257)
...+.|++.|+.=+ +.++-++.....+.+.|++||+.+.
T Consensus 107 ~F~~~~~~aGvdG~----------IipDLP~eE~~~~~~~~~~~Gl~~I 145 (252)
T 3tha_A 107 KFVKKAKSLGICAL----------IVPELSFEESDDLIKECERYNIALI 145 (252)
T ss_dssp HHHHHHHHTTEEEE----------ECTTCCGGGCHHHHHHHHHTTCEEC
T ss_pred HHHHHHHHcCCCEE----------EeCCCCHHHHHHHHHHHHHcCCeEE
Confidence 67888888886433 2233344556788888888887654
No 200
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=40.24 E-value=1.5e+02 Score=24.04 Aligned_cols=108 Identities=5% Similarity=0.028 Sum_probs=58.6
Q ss_pred CCCCCCCceecCCCCCcCCccceeCCcCCCCChhHHHHHHHHHHHcCCceeeCCCCC----CChHHHHHHHHHHHhCCCC
Q 025159 7 MGSISIPDVPLKSSNRRMPVLGLGTAASPFSGSETTKLAILEAMKLGYRHFDTATLY----QTEQPLGDAIAEALSTGII 82 (257)
Q Consensus 7 ~~~~~m~~~~l~~~~~~vs~lglG~~~~~~~~~~~~~~~l~~Al~~Gi~~~DtA~~Y----g~e~~lg~~l~~~~~~~~~ 82 (257)
|....++...+|.+ .|.|+.-... .+.+++...+..+.+.|...++.=-.| .+...+.+.++.+...-
T Consensus 5 ~~~~~v~~~~~g~~---~p~Icv~l~~---~~~~e~~~~~~~~~~~~~D~vElRvD~l~~~~~~~~v~~~l~~lr~~~-- 76 (257)
T 2yr1_A 5 PKAIKVRNIWIGGT---EPCICAPVVG---EDDRKVLREAEEVCRKQPDLLEWRADFFRAIDDQERVLATANGLRNIA-- 76 (257)
T ss_dssp SSCEEETTEEESSS---SCEEEEEECC---SSHHHHHHHHHHHHHSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHS--
T ss_pred CceEEEeeeeeCCC---CcEEEEEecC---CCHHHHHHHHHHHhhcCCCEEEEEeecccccCcHHHHHHHHHHHHHhc--
Confidence 34444455555555 6666665444 577888888888999998876433322 13345555555441110
Q ss_pred CCCCcEEEEeccCC----C-CCChhhHHHHHHHHHHhhC-CCcccEEE
Q 025159 83 KSRDELFIASKLWC----S-DAHRELVVPALQKSLENLQ-LEYIDLYV 124 (257)
Q Consensus 83 ~~R~~l~i~tK~~~----~-~~~~~~i~~~l~~sL~~Lg-~d~lDl~~ 124 (257)
..--+.++..... . ..+.+.-.+-++ ..-++| .||+|+=+
T Consensus 77 -~~~PiI~T~Rt~~eGG~~~~~~~~~~~~ll~-~~~~~g~~d~iDvEl 122 (257)
T 2yr1_A 77 -GEIPILFTIRSEREGGQPIPLNEAEVRRLIE-AICRSGAIDLVDYEL 122 (257)
T ss_dssp -SSCCEEEECCCTTTTCCCCSSCHHHHHHHHH-HHHHHTCCSEEEEEG
T ss_pred -cCCCEEEEEeecccCCCCCCCCHHHHHHHHH-HHHHcCCCCEEEEEC
Confidence 1223555555421 1 334333333444 445577 89999843
No 201
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=39.92 E-value=1.6e+02 Score=24.44 Aligned_cols=87 Identities=11% Similarity=0.058 Sum_probs=56.8
Q ss_pred HHHHH-HcCCeeEEEecCCCHHHHHHHHHhCCCC---------------CceeccccCCCCCcHHHHHHHHHCCceEEEe
Q 025159 157 MEECQ-NLGYTKAIGVSNFSCKKLGDILATAKIP---------------PAANQVEMNPLWQQNKLREFCKAKDIQLAAY 220 (257)
Q Consensus 157 l~~l~-~~G~ir~iGvs~~~~~~l~~~~~~~~~~---------------p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~ 220 (257)
+..+. +...++-+++++-+++..+++.+..++. ++++-+ ..+-....++...|-+.|+.|+.=
T Consensus 18 ~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~~~~~~~ll~~~~~D~V~i-~tp~~~h~~~~~~al~~Gk~vl~E 96 (344)
T 3mz0_A 18 INRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLV-TSWGPAHESSVLKAIKAQKYVFCE 96 (344)
T ss_dssp HHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEE-CSCGGGHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEE-CCCchhHHHHHHHHHHCCCcEEEc
Confidence 33454 4456788899999988888776654421 111110 111111256778888999999999
Q ss_pred cCCCCCCCCCCCCCccChHHHHHHHHHhCCCc
Q 025159 221 APLGARGTIWGSNRVMECEVLKEIAEAKGKTV 252 (257)
Q Consensus 221 ~pl~~~G~l~~~~~~~~~~~~~~ia~~~~~s~ 252 (257)
.|++. .......+.+.|++.|+..
T Consensus 97 KP~a~--------~~~e~~~l~~~a~~~g~~~ 120 (344)
T 3mz0_A 97 KPLAT--------TAEGCMRIVEEEIKVGKRL 120 (344)
T ss_dssp SCSCS--------SHHHHHHHHHHHHHHSSCC
T ss_pred CCCCC--------CHHHHHHHHHHHHHHCCEE
Confidence 99986 3445677888888888755
No 202
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=39.83 E-value=1.4e+02 Score=23.75 Aligned_cols=19 Identities=16% Similarity=0.282 Sum_probs=16.8
Q ss_pred cHHHHHHHHHCCceEEEec
Q 025159 203 QNKLREFCKAKDIQLAAYA 221 (257)
Q Consensus 203 ~~~~~~~~~~~gi~v~~~~ 221 (257)
..++++.|+++|+.|.+|.
T Consensus 193 ~~~~v~~~~~~G~~V~~WT 211 (250)
T 3ks6_A 193 DAGLMAQVQAAGLDFGCWA 211 (250)
T ss_dssp CHHHHHHHHHTTCEEEEEC
T ss_pred CHHHHHHHHHCCCEEEEEe
Confidence 3579999999999999994
No 203
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=39.73 E-value=1e+02 Score=23.99 Aligned_cols=90 Identities=9% Similarity=-0.062 Sum_probs=50.7
Q ss_pred HHHHcCCeeEEEecCCC------HHHHHHHHHhCCCCCceeccccCCC---CC------cHHHHHHHHHCCceEEEecCC
Q 025159 159 ECQNLGYTKAIGVSNFS------CKKLGDILATAKIPPAANQVEMNPL---WQ------QNKLREFCKAKDIQLAAYAPL 223 (257)
Q Consensus 159 ~l~~~G~ir~iGvs~~~------~~~l~~~~~~~~~~p~~~q~~~~~~---~~------~~~~~~~~~~~gi~v~~~~pl 223 (257)
...+. .|--||--... ...+.++....++...++-.++... .+ -..+++.|+++|++++.-|==
T Consensus 91 ~a~~~-~vDII~Hp~~~~~~~~~~~~~a~~A~e~gv~lEIn~s~~~~~~~~~R~~~~~~~~~il~l~k~~g~~ivisSDA 169 (212)
T 1v77_A 91 YSIEK-GVDAIISPWVNRKDPGIDHVLAKLMVKKNVALGFSLRPLLYSNPYERANLLRFMMKAWKLVEKYKVRRFLTSSA 169 (212)
T ss_dssp HHHHT-TCSEEECTTTTSSSCSCCHHHHHHHHHHTCEEEEESHHHHHSCHHHHHHHHHHHHHHHHHHHHHTCCEEEECCC
T ss_pred HHHhC-CCCEEecccccccCCCCCHHHHHHHHHCCeEEEEECcHHhcCCcchHHHHHHHHHHHHHHHHhcCCCEEEeCCC
Confidence 35556 77777754322 1344444444455444443332100 11 136899999999999876532
Q ss_pred CCCCCCCCCCCccChHHHHHHHHHhCCCcccc
Q 025159 224 GARGTIWGSNRVMECEVLKEIAEAKGKTVAQV 255 (257)
Q Consensus 224 ~~~G~l~~~~~~~~~~~~~~ia~~~~~s~~qv 255 (257)
.. +..+-....+.++++..|.+..++
T Consensus 170 h~------~~~v~~~~~~~~l~~~~G~~~e~~ 195 (212)
T 1v77_A 170 QE------KWDVRYPRDLISLGVVIGMEIPQA 195 (212)
T ss_dssp SS------GGGCCCHHHHHHHHHHTTCCHHHH
T ss_pred CC------hhhcCCHHHHHHHHHHcCCCHHHH
Confidence 21 123345578888889888876543
No 204
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=39.61 E-value=1.9e+02 Score=25.22 Aligned_cols=82 Identities=9% Similarity=0.037 Sum_probs=54.0
Q ss_pred ccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHc-C-CeeEE-Ee-cCCCHHHHHHHHHhCCCCCceecc
Q 025159 120 IDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNL-G-YTKAI-GV-SNFSCKKLGDILATAKIPPAANQV 195 (257)
Q Consensus 120 lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-G-~ir~i-Gv-s~~~~~~l~~~~~~~~~~p~~~q~ 195 (257)
.++++|..|.... -|+.+.+|.++ | .|.-. |= +.+++..+.++++....+ ++|+
T Consensus 283 ~~i~~iEePl~~~--------------------d~~~~~~l~~~~~~~ipIa~dEl~~~~~~~~~~~i~~~a~d--~i~i 340 (431)
T 2fym_A 283 YPIVSIEDGLDES--------------------DWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIAN--SILI 340 (431)
T ss_dssp SCEEEEESCSCTT--------------------CHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCS--EEEE
T ss_pred CCceEEECCCCcc--------------------cHHHHHHHHHHhCCCCeEEeCCcccCCHHHHHHHHHhCCCC--EEEE
Confidence 4788999985421 14455555543 2 44322 32 668999999998876655 7777
Q ss_pred ccCCCCC---cHHHHHHHHHCCceEEEecCC
Q 025159 196 EMNPLWQ---QNKLREFCKAKDIQLAAYAPL 223 (257)
Q Consensus 196 ~~~~~~~---~~~~~~~~~~~gi~v~~~~pl 223 (257)
..+-+.- -..+...|+++|+.++..+-.
T Consensus 341 k~~~~GGite~~~i~~~A~~~g~~~~~~h~~ 371 (431)
T 2fym_A 341 KFNQIGSLTETLAAIKMAKDAGYTAVISHRS 371 (431)
T ss_dssp CGGGTCSHHHHHHHHHHHHHTTCEEEEECCS
T ss_pred CccccCCHHHHHHHHHHHHHCCCeEEEeCCC
Confidence 6654332 257899999999999765544
No 205
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=39.53 E-value=1.8e+02 Score=24.88 Aligned_cols=76 Identities=13% Similarity=0.003 Sum_probs=43.0
Q ss_pred EEEeccCCCCC-------ChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHH
Q 025159 89 FIASKLWCSDA-------HRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQ 161 (257)
Q Consensus 89 ~i~tK~~~~~~-------~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 161 (257)
.|..|+.+.+. ++..--..+-+.|+..|+|||+ +|.... . . +..+ +++
T Consensus 221 ~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~---v~~~~~--~-~----------------~~~~---~ik 275 (362)
T 4ab4_A 221 RVGVHLAPRADAHDMGDADRAETFTYVARELGKRGIAFIC---SREREA--D-D----------------SIGP---LIK 275 (362)
T ss_dssp GEEEEECTTCCSSSCCCTTHHHHHHHHHHHHHHTTCSEEE---EECCCC--T-T----------------CCHH---HHH
T ss_pred ceEEEeeccccccccCCCCcHHHHHHHHHHHHHhCCCEEE---ECCCCC--C-H----------------HHHH---HHH
Confidence 56778755421 1122234566777888876655 465431 0 0 1112 222
Q ss_pred HcCCeeEEEecCCCHHHHHHHHHhCCCC
Q 025159 162 NLGYTKAIGVSNFSCKKLGDILATAKIP 189 (257)
Q Consensus 162 ~~G~ir~iGvs~~~~~~l~~~~~~~~~~ 189 (257)
+.=.+--|++..++++..+++++....+
T Consensus 276 ~~~~iPvi~~Ggit~e~a~~~l~~g~aD 303 (362)
T 4ab4_A 276 EAFGGPYIVNERFDKASANAALASGKAD 303 (362)
T ss_dssp HHHCSCEEEESSCCHHHHHHHHHTTSCS
T ss_pred HHCCCCEEEeCCCCHHHHHHHHHcCCcc
Confidence 2223455788888999999999876655
No 206
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=39.35 E-value=2e+02 Score=25.30 Aligned_cols=121 Identities=12% Similarity=0.095 Sum_probs=72.6
Q ss_pred HHHHHHHHhCCCCCCCCcEEEEeccC-------------CCCCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCC
Q 025159 70 GDAIAEALSTGIIKSRDELFIASKLW-------------CSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSY 136 (257)
Q Consensus 70 g~~l~~~~~~~~~~~R~~l~i~tK~~-------------~~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~ 136 (257)
-+++++. +.- .-+++.|..-+. ....+++...+-+++.++.+ ++++|..|.+..
T Consensus 225 ~~Air~a---gy~-~G~dv~l~vD~aase~~~~g~Y~l~~~~~t~~eai~~~~~ll~~y-----~i~~IEdPl~~d---- 291 (428)
T 3tqp_A 225 LEAIEDA---NYV-PGKDIYLALDAASSELYQNGRYDFENNQLTSEEMIDRLTEWTKKY-----PVISIEDGLSEN---- 291 (428)
T ss_dssp HHHHHHT---TCC-BTTTBEEEEECCGGGSEETTEECCSSSCBCHHHHHHHHHHHHHHS-----CEEEEECCSCTT----
T ss_pred HHHHHHh---hcc-cCCceEEEEecchhhhccCCceeccccccCHHHHHHHHHHHHhhc-----ccceEeCCCCcc----
Confidence 4566665 530 125666666552 12345666666666666643 588899885422
Q ss_pred CCCCcccCCCCccHHHHHHHHHHHHHc-C-CeeEEEec--CCCHHHHHHHHHhCCCCCceeccccCCCCC---cHHHHHH
Q 025159 137 EFPIKKEDFLPMDFKSVWEAMEECQNL-G-YTKAIGVS--NFSCKKLGDILATAKIPPAANQVEMNPLWQ---QNKLREF 209 (257)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~l~~l~~~-G-~ir~iGvs--~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~---~~~~~~~ 209 (257)
-|+.+.+|.+. + .|.-+|=- -.+++.+.++++....+ ++|+..+-+.- ...+.+.
T Consensus 292 ----------------D~eg~~~L~~~~~~pI~ivGDel~vt~~~~~~~~i~~~a~d--~i~iKv~~iGGiTealkia~l 353 (428)
T 3tqp_A 292 ----------------DWAGWKLLTERLENKVQLVGDDIFVTNPDILEKGIKKNIAN--AILVKLNQIGTLTETLATVGL 353 (428)
T ss_dssp ----------------CHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCS--EEEECHHHHCCHHHHHHHHHH
T ss_pred ----------------cHHHHHHHHHhcCCCcceeccccccCCHHHHHHHHHhCCCC--EEEecccccCCHHHHHHHHHH
Confidence 13444455443 2 45545643 34899999998876655 66666553322 3678999
Q ss_pred HHHCCceEEEec
Q 025159 210 CKAKDIQLAAYA 221 (257)
Q Consensus 210 ~~~~gi~v~~~~ 221 (257)
|+++|++++..+
T Consensus 354 A~~~G~~~~v~H 365 (428)
T 3tqp_A 354 AKSNKYGVIISH 365 (428)
T ss_dssp HHHTTCEEEEEC
T ss_pred HHHcCCeEEEeC
Confidence 999999965444
No 207
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=39.22 E-value=1.6e+02 Score=25.51 Aligned_cols=84 Identities=12% Similarity=0.056 Sum_probs=54.6
Q ss_pred HHHHcCCeeEE-EecCCCHHHHHHHHHhCCCC---------------------CceeccccCCCCCcHHHHHHHHHCCce
Q 025159 159 ECQNLGYTKAI-GVSNFSCKKLGDILATAKIP---------------------PAANQVEMNPLWQQNKLREFCKAKDIQ 216 (257)
Q Consensus 159 ~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~---------------------p~~~q~~~~~~~~~~~~~~~~~~~gi~ 216 (257)
.+...+.++-+ ||++-+++..+++.+..+++ ++++- -.++-....++...|-+.|+.
T Consensus 58 ~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~-I~tp~~~H~~~~~~al~aGkh 136 (417)
T 3v5n_A 58 AARLDDHYELVAGALSSTPEKAEASGRELGLDPSRVYSDFKEMAIREAKLKNGIEAVA-IVTPNHVHYAAAKEFLKRGIH 136 (417)
T ss_dssp HHHHTSCEEEEEEECCSSHHHHHHHHHHHTCCGGGBCSCHHHHHHHHHHCTTCCSEEE-ECSCTTSHHHHHHHHHTTTCE
T ss_pred HHhhCCCcEEEEEEeCCCHHHHHHHHHHcCCCcccccCCHHHHHhcccccCCCCcEEE-ECCCcHHHHHHHHHHHhCCCe
Confidence 35566667666 58888888777665544332 11111 111112236788889999999
Q ss_pred EEEecCCCCCCCCCCCCCccChHHHHHHHHHhCCC
Q 025159 217 LAAYAPLGARGTIWGSNRVMECEVLKEIAEAKGKT 251 (257)
Q Consensus 217 v~~~~pl~~~G~l~~~~~~~~~~~~~~ia~~~~~s 251 (257)
|+.=.|++. .......+.+.|++.|+.
T Consensus 137 Vl~EKPla~--------~~~ea~~l~~~a~~~g~~ 163 (417)
T 3v5n_A 137 VICDKPLTS--------TLADAKKLKKAADESDAL 163 (417)
T ss_dssp EEEESSSCS--------SHHHHHHHHHHHHHCSSC
T ss_pred EEEECCCcC--------CHHHHHHHHHHHHHcCCE
Confidence 999999986 344557778888888764
No 208
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=38.53 E-value=1.1e+02 Score=26.72 Aligned_cols=67 Identities=10% Similarity=0.078 Sum_probs=48.4
Q ss_pred HHHHHHHHHcCCe-eEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCC---cHHHHHHHHHCCceEEEecC
Q 025159 154 WEAMEECQNLGYT-KAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQ---QNKLREFCKAKDIQLAAYAP 222 (257)
Q Consensus 154 ~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~---~~~~~~~~~~~gi~v~~~~p 222 (257)
++.+.++++.-.| -..|=+-++++.+.++++...++ ++|....-+.- ...+.+.|+++|+.++.++.
T Consensus 254 ~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d--~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 324 (410)
T 3dip_A 254 IPAVADLRRQTRAPICGGENLAGTRRFHEMLCADAID--FVMLDLTWCGGLSEGRKIAALAETHARPLAPHXT 324 (410)
T ss_dssp HHHHHHHHHHHCCCEEECTTCCSHHHHHHHHHTTCCS--EEEECTTTSSCHHHHHHHHHHHHHTTCCEEECSS
T ss_pred HHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCC--eEeecccccCCHHHHHHHHHHHHHcCCEEeeeCc
Confidence 3455666664344 34566778899999999876665 78877765432 36789999999999988765
No 209
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=38.25 E-value=1.8e+02 Score=24.60 Aligned_cols=147 Identities=16% Similarity=0.107 Sum_probs=79.1
Q ss_pred CChhHHHHHHHHHHHcCCceeeCCCCCC-----ChHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHH
Q 025159 37 SGSETTKLAILEAMKLGYRHFDTATLYQ-----TEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKS 111 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg-----~e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~s 111 (257)
..++++.+.+..+++.+.. .|+ -...+.+++.+.+.-.. ..+++++++- ..++++..
T Consensus 74 ~~~~~v~~a~~~~~~~~~~------~y~~~~~~l~~~l~~~l~~~~g~~~--~~~~v~~~~g----------~~ea~~~a 135 (421)
T 3l8a_A 74 LPVPEIKEAIINYGREHIF------GYNYFNDDLYQAVIDWERKEHDYAV--VKEDILFIDG----------VVPAISIA 135 (421)
T ss_dssp CCCHHHHHHHHHHHHHCCS------SCBCCCHHHHHHHHHHHHHHHCCCC--CGGGEEEESC----------HHHHHHHH
T ss_pred CCCHHHHHHHHHHHhcCCc------CCCCCCHHHHHHHHHHHHHHhCCCC--CHHHEEEcCC----------HHHHHHHH
Confidence 3567788888888876543 232 13334444443321112 3456665432 23334444
Q ss_pred HHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEEec------CCCHHHHHHHHHh
Q 025159 112 LENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGVS------NFSCKKLGDILAT 185 (257)
Q Consensus 112 L~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs------~~~~~~l~~~~~~ 185 (257)
++.+ +..=|-+++..|.. ......+..+ ...+..+-+. ..+.+.+++.++.
T Consensus 136 ~~~~-~~~gd~Vi~~~~~y--------------------~~~~~~~~~~--g~~~~~~~~~~~~~~~~~d~~~le~~i~~ 192 (421)
T 3l8a_A 136 LQAF-SEKGDAVLINSPVY--------------------YPFARTIRLN--DHRLVENSLQIINGRFEIDFEQLEKDIID 192 (421)
T ss_dssp HHHH-SCTEEEEEEEESCC--------------------HHHHHHHHHT--TEEEEEEECEEETTEEECCHHHHHHHHHH
T ss_pred HHHh-cCCCCEEEECCCCc--------------------HHHHHHHHHC--CCEEEeccccccCCCeeeCHHHHHHHhhc
Confidence 4444 23337777777743 1222322221 2344555443 2588999998875
Q ss_pred CCCCCceeccccCCCCC----c--HHHHHHHHHCCceEEEecCCC
Q 025159 186 AKIPPAANQVEMNPLWQ----Q--NKLREFCKAKDIQLAAYAPLG 224 (257)
Q Consensus 186 ~~~~p~~~q~~~~~~~~----~--~~~~~~~~~~gi~v~~~~pl~ 224 (257)
.+.+..++..+-|+... + .++.+.|+++|+-++.=...+
T Consensus 193 ~~~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~ 237 (421)
T 3l8a_A 193 NNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQ 237 (421)
T ss_dssp TTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTT
T ss_pred cCCeEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEcccc
Confidence 44444444334444322 1 578999999999999866654
No 210
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=38.12 E-value=93 Score=25.70 Aligned_cols=101 Identities=14% Similarity=0.080 Sum_probs=54.1
Q ss_pred CChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEEecCCCHHH
Q 025159 99 AHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGVSNFSCKK 178 (257)
Q Consensus 99 ~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~ 178 (257)
.+.+ -+..+-+.|.++|+++|.+-....|... | . ..+.++.+..+.+...++..++. .+...
T Consensus 24 ~~~e-~k~~i~~~L~~~Gv~~IE~g~~~~~~~~-p-------------~--~~d~~~~~~~~~~~~~~~~~~l~-~~~~~ 85 (298)
T 2cw6_A 24 VSTP-VKIKLIDMLSEAGLSVIETTSFVSPKWV-P-------------Q--MGDHTEVLKGIQKFPGINYPVLT-PNLKG 85 (298)
T ss_dssp CCHH-HHHHHHHHHHHTTCSEECCEECCCTTTC-G-------------G--GTTHHHHHHHSCCCTTCBCCEEC-CSHHH
T ss_pred CCHH-HHHHHHHHHHHcCcCEEEECCCcCcccc-c-------------c--cCCHHHHHHHHhhCCCCEEEEEc-CCHHh
Confidence 3444 3446777889999999988764333211 1 0 11223344444443334433433 46677
Q ss_pred HHHHHHhCCCCCceeccccCC--CC------C--------cHHHHHHHHHCCceEEEe
Q 025159 179 LGDILATAKIPPAANQVEMNP--LW------Q--------QNKLREFCKAKDIQLAAY 220 (257)
Q Consensus 179 l~~~~~~~~~~p~~~q~~~~~--~~------~--------~~~~~~~~~~~gi~v~~~ 220 (257)
++.+++. +++ .+.+..+. .+ . -.+.+++++++|+.+..+
T Consensus 86 i~~a~~a-g~~--~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~ 140 (298)
T 2cw6_A 86 FEAAVAA-GAK--EVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGY 140 (298)
T ss_dssp HHHHHHT-TCS--EEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHC-CCC--EEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence 7777664 343 22222211 10 0 146789999999988643
No 211
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=37.94 E-value=1.4e+02 Score=25.01 Aligned_cols=67 Identities=12% Similarity=0.162 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEec
Q 025159 150 FKSVWEAMEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYA 221 (257)
Q Consensus 150 ~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~ 221 (257)
.+.+...++.+++.-.+ -|.|-+++++.++++++... +.+| ..+....+.++++.+.++|++++.+.
T Consensus 70 ~~Rv~pvI~~l~~~~~v-piSIDT~~~~Va~aAl~aGa--~iIN--DVsg~~~d~~m~~v~a~~~~~vvlmh 136 (314)
T 2vef_A 70 IQRVVPVIKAIRKESDV-LISIDTWKSQVAEAALAAGA--DLVN--DITGLMGDEKMPHVVAEARAQVVIMF 136 (314)
T ss_dssp HHHHHHHHHHHHHHCCC-EEEEECSCHHHHHHHHHTTC--CEEE--ETTTTCSCTTHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHHHHHhhCCc-eEEEeCCCHHHHHHHHHcCC--CEEE--ECCCCCCChHHHHHHHHcCCCEEEEe
Confidence 44455666666665222 48999999999999999743 3455 44444444689999999999999884
No 212
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=37.74 E-value=63 Score=24.76 Aligned_cols=59 Identities=17% Similarity=0.301 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHcCCeeEEEecC-CCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEE
Q 025159 152 SVWEAMEECQNLGYTKAIGVSN-FSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAA 219 (257)
Q Consensus 152 ~~~~~l~~l~~~G~ir~iGvs~-~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~ 219 (257)
+.++.+.+....+. .||+++ .++++++++.+. +.+ .+ +++.. ..++++.|+++|++++.
T Consensus 50 ~~i~~ir~~~~~~~--~ig~~~v~~~~~~~~a~~~-Gad--~i---v~~~~-~~~~~~~~~~~g~~vi~ 109 (205)
T 1wa3_A 50 TVIKELSFLKEKGA--IIGAGTVTSVEQCRKAVES-GAE--FI---VSPHL-DEEISQFCKEKGVFYMP 109 (205)
T ss_dssp HHHHHTHHHHHTTC--EEEEESCCSHHHHHHHHHH-TCS--EE---ECSSC-CHHHHHHHHHHTCEEEC
T ss_pred HHHHHHHHHCCCCc--EEEecccCCHHHHHHHHHc-CCC--EE---EcCCC-CHHHHHHHHHcCCcEEC
Confidence 44444444432233 488844 789998887764 333 22 22222 25799999999999986
No 213
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=37.60 E-value=1.7e+02 Score=24.46 Aligned_cols=86 Identities=10% Similarity=0.094 Sum_probs=54.7
Q ss_pred HHHHHc-CCeeEEEecCCCHHHHHHHHHhCCCC-------------CceeccccCCCCCcHHHHHHHHHCCceEEEecCC
Q 025159 158 EECQNL-GYTKAIGVSNFSCKKLGDILATAKIP-------------PAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPL 223 (257)
Q Consensus 158 ~~l~~~-G~ir~iGvs~~~~~~l~~~~~~~~~~-------------p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl 223 (257)
..+.+. ..++-+++++-+++.++++.+..+++ ++++-+ ..+-....++...|-+.|+.|+.-.|+
T Consensus 30 ~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i-~tp~~~h~~~~~~al~~gk~v~~EKP~ 108 (354)
T 3q2i_A 30 GALEKHADRAELIDVCDIDPAALKAAVERTGARGHASLTDMLAQTDADIVIL-TTPSGLHPTQSIECSEAGFHVMTEKPM 108 (354)
T ss_dssp HHHHHTTTTEEEEEEECSSHHHHHHHHHHHCCEEESCHHHHHHHCCCSEEEE-CSCGGGHHHHHHHHHHTTCEEEECSSS
T ss_pred HHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEE-CCCcHHHHHHHHHHHHCCCCEEEeCCC
Confidence 445555 57888999999988877765543321 111111 011111256777888999999999999
Q ss_pred CCCCCCCCCCCccChHHHHHHHHHhCCCc
Q 025159 224 GARGTIWGSNRVMECEVLKEIAEAKGKTV 252 (257)
Q Consensus 224 ~~~G~l~~~~~~~~~~~~~~ia~~~~~s~ 252 (257)
+. +......+.+.|++.|+..
T Consensus 109 a~--------~~~~~~~l~~~a~~~g~~~ 129 (354)
T 3q2i_A 109 AT--------RWEDGLEMVKAADKAKKHL 129 (354)
T ss_dssp CS--------SHHHHHHHHHHHHHHTCCE
T ss_pred cC--------CHHHHHHHHHHHHHhCCeE
Confidence 76 3445577778888887643
No 214
>4a18_G RPL30; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_G 4a1b_G 4a1d_G 4adx_6
Probab=37.52 E-value=48 Score=22.86 Aligned_cols=63 Identities=6% Similarity=0.130 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEe
Q 025159 151 KSVWEAMEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAY 220 (257)
Q Consensus 151 ~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~ 220 (257)
+.+...|.-..+.|++. .|. .+..+.++.......+.--+.++. ....+..+|++++|+++.|
T Consensus 8 ~~i~~~L~la~kagklv-~G~-----~~v~kai~~gkaklViiA~D~~~~-~~~~i~~~c~~~~ip~~~~ 70 (104)
T 4a18_G 8 DNIQSKLALVMRSGKAT-LGY-----KSTIKAIRNGTAKLVFISNNCPTV-RKSEIEYYASLAQISIHHF 70 (104)
T ss_dssp CHHHHHHHHHHHHSEEE-ESH-----HHHHHHHHHTCCCEEEECTTSCHH-HHHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHHHHhCCEe-ECH-----HHHHHHHHcCCceEEEEeCCCCHH-HHHHHHHHHHHcCCcEEEe
Confidence 46777888888899874 565 677788888777766665555432 2356788899999999864
No 215
>3u5e_c L32, RP73, YL38, 60S ribosomal protein L30; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_f 3izs_f 3o58_Z 3o5h_Z 1t0k_B 3u5i_c 4b6a_c 1ck2_A 1cn7_A 1nmu_B* 3jyw_2
Probab=36.82 E-value=46 Score=23.01 Aligned_cols=64 Identities=11% Similarity=0.083 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEe
Q 025159 150 FKSVWEAMEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAY 220 (257)
Q Consensus 150 ~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~ 220 (257)
.+.+...|.-..+.|++. .|. .+..+.++.......+.--+.++ .....+..+|++++|+++.|
T Consensus 7 ~~~i~~~L~la~kagk~v-~G~-----~~v~kai~~gkaklVilA~D~~~-~~~~~i~~~c~~~~ip~~~~ 70 (105)
T 3u5e_c 7 QESINQKLALVIKSGKYT-LGY-----KSTVKSLRQGKSKLIIIAANTPV-LRKSELEYYAMLSKTKVYYF 70 (105)
T ss_dssp --CHHHHHHHHHTTSEEE-ESH-----HHHHHHHHTTCCSEEEECTTSCH-HHHHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHHHHHhCCee-ECH-----HHHHHHHHcCCceEEEEeCCCCH-HHHHHHHHHHHHcCCCEEEe
Confidence 345778888888899873 555 67778888877776666555432 12367889999999999865
No 216
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=36.68 E-value=45 Score=22.82 Aligned_cols=62 Identities=8% Similarity=0.072 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEe
Q 025159 152 SVWEAMEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAY 220 (257)
Q Consensus 152 ~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~ 220 (257)
.+...|.-..+.|++. .|. .+..+.++.......+.-.+.++. ....+..+|++++|+++-+
T Consensus 5 ki~~~L~la~kagk~v-~G~-----~~v~kai~~gka~lViiA~D~~~~-~~~~i~~~c~~~~ip~~~~ 66 (101)
T 3on1_A 5 KWLSLLGLAARARQLL-TGE-----EQVVKAVQNGQVTLVILSSDAGIH-TKKKLLDKCGSYQIPVKVV 66 (101)
T ss_dssp HHHHHHHHHHHTTCEE-ESH-----HHHHHHHHTTCCSEEEEETTSCHH-HHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHCCEe-ECH-----HHHHHHHHcCCCcEEEEeCCCCHH-HHHHHHHHHHHcCCCEEEe
Confidence 5677788888999974 565 677888888777777776665552 2357888999999999854
No 217
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=36.49 E-value=1.2e+02 Score=25.54 Aligned_cols=87 Identities=10% Similarity=0.142 Sum_probs=56.2
Q ss_pred HHHHH-HcCCeeEEEecCCCHHHHHHHHHhCCCC---------------CceeccccCCCCCcHHHHHHHHHCCceEEEe
Q 025159 157 MEECQ-NLGYTKAIGVSNFSCKKLGDILATAKIP---------------PAANQVEMNPLWQQNKLREFCKAKDIQLAAY 220 (257)
Q Consensus 157 l~~l~-~~G~ir~iGvs~~~~~~l~~~~~~~~~~---------------p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~ 220 (257)
+..+. +...++-++|++-+++.++++.+..++. ++++-+ ..+-....++...|-+.|+.|+.=
T Consensus 39 ~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~ll~~~~~D~V~i-~tp~~~h~~~~~~al~aGk~Vl~E 117 (357)
T 3ec7_A 39 LRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKDYNDYHDLINDKDVEVVII-TASNEAHADVAVAALNANKYVFCE 117 (357)
T ss_dssp HHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCCEEESSHHHHHHCTTCCEEEE-CSCGGGHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEE-cCCcHHHHHHHHHHHHCCCCEEee
Confidence 34455 4456888899998877777665543321 111111 111112357788889999999999
Q ss_pred cCCCCCCCCCCCCCccChHHHHHHHHHhCCCc
Q 025159 221 APLGARGTIWGSNRVMECEVLKEIAEAKGKTV 252 (257)
Q Consensus 221 ~pl~~~G~l~~~~~~~~~~~~~~ia~~~~~s~ 252 (257)
.|++. .......+.+.|++.|+..
T Consensus 118 KPla~--------~~~e~~~l~~~a~~~g~~~ 141 (357)
T 3ec7_A 118 KPLAV--------TAADCQRVIEAEQKNGKRM 141 (357)
T ss_dssp SSSCS--------SHHHHHHHHHHHHHHTSCC
T ss_pred cCccC--------CHHHHHHHHHHHHHhCCeE
Confidence 99986 4445677888888888755
No 218
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=36.46 E-value=2e+02 Score=24.56 Aligned_cols=24 Identities=17% Similarity=0.108 Sum_probs=19.0
Q ss_pred eeEEEecCCCHHHHHHHHHhCCCC
Q 025159 166 TKAIGVSNFSCKKLGDILATAKIP 189 (257)
Q Consensus 166 ir~iGvs~~~~~~l~~~~~~~~~~ 189 (257)
+--|++.+++++..+++++....+
T Consensus 288 iPvi~~Ggit~e~a~~~l~~G~aD 311 (361)
T 3gka_A 288 GPFIVNENFTLDSAQAALDAGQAD 311 (361)
T ss_dssp SCEEEESSCCHHHHHHHHHTTSCS
T ss_pred CCEEEeCCCCHHHHHHHHHcCCcc
Confidence 455788888999999999876655
No 219
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=35.99 E-value=1.5e+02 Score=26.29 Aligned_cols=101 Identities=15% Similarity=0.110 Sum_probs=58.0
Q ss_pred HHHHHHHHHH---cCC-eeEEEecCCCHHHHHHHHHh-CCCCCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCC
Q 025159 153 VWEAMEECQN---LGY-TKAIGVSNFSCKKLGDILAT-AKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARG 227 (257)
Q Consensus 153 ~~~~l~~l~~---~G~-ir~iGvs~~~~~~l~~~~~~-~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G 227 (257)
+...++.+++ +-. =--|.|-++.++.++++++. ++.+..+|-+. . ....++++.++++|++++.+.--+...
T Consensus 252 v~pvI~~l~~~~~~~~~~vpISIDT~~~~VaeaAL~~~aGa~i~INDVs--g-~~d~~m~~v~a~~g~~vVlMh~~G~P~ 328 (442)
T 3mcm_A 252 LNEFLEYFKSQLANLIYKPLVSIDTRKLEVMQKILAKHHDIIWMINDVE--C-NNIEQKAQLIAKYNKKYVIIHNLGITD 328 (442)
T ss_dssp HHHHHHHHHHHTTTCSSCCEEEEECCCHHHHHHHHHHHGGGCCEEEECC--C-TTHHHHHHHHHHHTCEEEEECC-----
T ss_pred HHHHHHHHHhhccccCCCCeEEEeCCCHHHHHHHHhhCCCCCEEEEcCC--C-CCChHHHHHHHHhCCeEEEECCCCCCc
Confidence 4445666665 210 12489999999999999982 23332255333 3 345689999999999999875432100
Q ss_pred C--CCCCCCccC-----hHHHHHHHHHhCCCccccc
Q 025159 228 T--IWGSNRVME-----CEVLKEIAEAKGKTVAQVL 256 (257)
Q Consensus 228 ~--l~~~~~~~~-----~~~~~~ia~~~~~s~~qva 256 (257)
- ......+.. -....+.|.+.|+...++.
T Consensus 329 tmq~~~y~dvv~ev~~~l~~~i~~a~~aGI~~~~Ii 364 (442)
T 3mcm_A 329 RNQYLDKENAIDNVCDYIEQKKQILLKHGIAQQNIY 364 (442)
T ss_dssp -----------CTHHHHHHHHHHHHHHHTCCGGGEE
T ss_pred cccccCcccHHHHHHHHHHHHHHHHHHcCCCHHHEE
Confidence 0 000001111 1344567788899877764
No 220
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=35.86 E-value=1.8e+02 Score=24.38 Aligned_cols=86 Identities=15% Similarity=0.150 Sum_probs=54.4
Q ss_pred HHHHcCCeeEEEecCCCHHHHHHHHHhCCCCC--ceec----------cc----cCCCCCcHHHHHHHHHCCceEEEecC
Q 025159 159 ECQNLGYTKAIGVSNFSCKKLGDILATAKIPP--AANQ----------VE----MNPLWQQNKLREFCKAKDIQLAAYAP 222 (257)
Q Consensus 159 ~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~p--~~~q----------~~----~~~~~~~~~~~~~~~~~gi~v~~~~p 222 (257)
.+.+...++-++|++-+++..+++.+..++++ .... +. ..+-....++...|-++|+.|+.-+|
T Consensus 24 ~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~V~~EKP 103 (362)
T 1ydw_A 24 AIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTSLHVEWAIKAAEKGKHILLEKP 103 (362)
T ss_dssp HHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCGGGHHHHHHHHHTTTCEEEECSS
T ss_pred HHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEEcCChHHHHHHHHHHHHCCCeEEEecC
Confidence 34555667888999999888777766544311 0100 00 00111124677788899999999999
Q ss_pred CCCCCCCCCCCCccChHHHHHHHHHhCCCc
Q 025159 223 LGARGTIWGSNRVMECEVLKEIAEAKGKTV 252 (257)
Q Consensus 223 l~~~G~l~~~~~~~~~~~~~~ia~~~~~s~ 252 (257)
++. .......+.+.|++.|+..
T Consensus 104 ~a~--------~~~e~~~l~~~a~~~g~~~ 125 (362)
T 1ydw_A 104 VAM--------NVTEFDKIVDACEANGVQI 125 (362)
T ss_dssp CSS--------SHHHHHHHHHHHHTTTCCE
T ss_pred CcC--------CHHHHHHHHHHHHHcCCEE
Confidence 975 3444577888888887643
No 221
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=35.35 E-value=2e+02 Score=24.22 Aligned_cols=88 Identities=10% Similarity=-0.005 Sum_probs=47.2
Q ss_pred cEEEEeccCCCC-----CChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHH
Q 025159 87 ELFIASKLWCSD-----AHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQ 161 (257)
Q Consensus 87 ~l~i~tK~~~~~-----~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 161 (257)
++-|..|+.+.+ .+.+.. ..+-+.|+..|+|||++ |....... . .+ .. ....++...+++
T Consensus 209 ~~pv~vRls~~~~~~~g~~~~~~-~~la~~L~~~Gvd~i~v---s~g~~~~~-~--~~----~~----~~~~~~~~~~ik 273 (340)
T 3gr7_A 209 DGPLFVRISASDYHPDGLTAKDY-VPYAKRMKEQGVDLVDV---SSGAIVPA-R--MN----VY----PGYQVPFAELIR 273 (340)
T ss_dssp CSCEEEEEESCCCSTTSCCGGGH-HHHHHHHHHTTCCEEEE---ECCCSSCC-C--CC----CC----TTTTHHHHHHHH
T ss_pred CCceEEEeccccccCCCCCHHHH-HHHHHHHHHcCCCEEEE---ecCCccCC-C--CC----CC----ccccHHHHHHHH
Confidence 455777885543 233333 34556677889766554 43211110 0 00 00 001234445555
Q ss_pred HcCCeeEEEecCC-CHHHHHHHHHhCCCC
Q 025159 162 NLGYTKAIGVSNF-SCKKLGDILATAKIP 189 (257)
Q Consensus 162 ~~G~ir~iGvs~~-~~~~l~~~~~~~~~~ 189 (257)
+.=.+--|++.+. +++..+++++....+
T Consensus 274 ~~~~iPVi~~GgI~s~e~a~~~L~~G~aD 302 (340)
T 3gr7_A 274 READIPTGAVGLITSGWQAEEILQNGRAD 302 (340)
T ss_dssp HHTTCCEEEESSCCCHHHHHHHHHTTSCS
T ss_pred HHcCCcEEeeCCCCCHHHHHHHHHCCCee
Confidence 5545666888776 688999998876554
No 222
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=35.22 E-value=1.9e+02 Score=23.96 Aligned_cols=127 Identities=13% Similarity=0.046 Sum_probs=73.1
Q ss_pred CCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHH--cCCee-EEEecCC
Q 025159 98 DAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQN--LGYTK-AIGVSNF 174 (257)
Q Consensus 98 ~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~--~G~ir-~iGvs~~ 174 (257)
..+.+.+++.++..++ -| +|-+++-.-.-+. ..++.+|-.+.++..++ .|++. -+|++..
T Consensus 25 ~iD~~~l~~lv~~li~-~G---v~gl~v~GtTGE~-------------~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~ 87 (309)
T 3fkr_A 25 DLDLASQKRAVDFMID-AG---SDGLCILANFSEQ-------------FAITDDERDVLTRTILEHVAGRVPVIVTTSHY 87 (309)
T ss_dssp SBCHHHHHHHHHHHHH-TT---CSCEEESSGGGTG-------------GGSCHHHHHHHHHHHHHHHTTSSCEEEECCCS
T ss_pred CcCHHHHHHHHHHHHH-cC---CCEEEECccccCc-------------ccCCHHHHHHHHHHHHHHhCCCCcEEEecCCc
Confidence 3567888888887775 46 5666665432211 13445665555555555 46654 4599887
Q ss_pred CHHHHHHHHHh---CCCCCceeccccCC---CCCcHHHHHH----HHHCCceEEEecCCCCCCCCCCCCCccChHHHHHH
Q 025159 175 SCKKLGDILAT---AKIPPAANQVEMNP---LWQQNKLREF----CKAKDIQLAAYAPLGARGTIWGSNRVMECEVLKEI 244 (257)
Q Consensus 175 ~~~~l~~~~~~---~~~~p~~~q~~~~~---~~~~~~~~~~----~~~~gi~v~~~~pl~~~G~l~~~~~~~~~~~~~~i 244 (257)
+..+..++.+. .+.+-.++-.+|.. --.+.+++++ ++.-+++++.|+.-.. |. .+..+.+.++
T Consensus 88 ~t~~ai~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~~lPiilYn~P~t-g~------~l~~~~~~~L 160 (309)
T 3fkr_A 88 STQVCAARSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAIAIPIMVQDAPAS-GT------ALSAPFLARM 160 (309)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHCSSCEEEEECGGG-CC------CCCHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCC-CC------CCCHHHHHHH
Confidence 76665444333 34554444445431 1123455444 4556999999984333 43 2456778888
Q ss_pred HHHh
Q 025159 245 AEAK 248 (257)
Q Consensus 245 a~~~ 248 (257)
|+++
T Consensus 161 a~~~ 164 (309)
T 3fkr_A 161 AREI 164 (309)
T ss_dssp HHHS
T ss_pred HhhC
Confidence 8665
No 223
>2p3z_A L-rhamnonate dehydratase; enolase, structural genomics, PSI, protein structure initiat YORK structural genomics research consortium; 1.80A {Salmonella typhimurium LT2} PDB: 3box_A 3cxo_A* 2gsh_A 3d47_A 3d46_A 2i5q_A
Probab=35.17 E-value=1.4e+02 Score=25.98 Aligned_cols=65 Identities=11% Similarity=0.061 Sum_probs=43.6
Q ss_pred HHHHHHHHHcCC--e-eEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCC---cHHHHHHHHHCCceEEEec
Q 025159 154 WEAMEECQNLGY--T-KAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQ---QNKLREFCKAKDIQLAAYA 221 (257)
Q Consensus 154 ~~~l~~l~~~G~--i-r~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~---~~~~~~~~~~~gi~v~~~~ 221 (257)
|+.+.+|.+.-. | -..|=+-++...+.++++.. ++ ++|+..+-+.- -..+.+.|+++|+.++.++
T Consensus 262 ~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~i~~~-~d--~i~ik~~~~GGitea~~ia~lA~~~gi~v~~h~ 332 (415)
T 2p3z_A 262 YEGYRELKRNAPAGMMVTSGEHHGTLQSFRTLAETG-ID--IMQPDVGWCGGLTTLVEIAALAKSRGQLVVPHG 332 (415)
T ss_dssp HHHHHHHHHHSCTTCEEEECTTCCSHHHHHHHHHTT-CS--EECCCHHHHTCHHHHHHHHHHHHHTTCCBCCCC
T ss_pred HHHHHHHHHhcCCCCcEEcCCCCCCHHHHHHHHHcC-CC--EEEeCccccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 455666665432 3 24466677889999988865 44 77766554322 2678999999999988754
No 224
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=34.92 E-value=37 Score=26.98 Aligned_cols=98 Identities=14% Similarity=0.130 Sum_probs=0.0
Q ss_pred HHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHh
Q 025159 106 PALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGVSNFSCKKLGDILAT 185 (257)
Q Consensus 106 ~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~ 185 (257)
...-+.++++|.+.+++..-|.+....+ +.++.+.++.++--++..+++.+..
T Consensus 33 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~------------------~~~~~~~~~l~~~gl~i~~~~~~~~--------- 85 (257)
T 3lmz_A 33 DTTLKTLERLDIHYLCIKDFHLPLNSTD------------------EQIRAFHDKCAAHKVTGYAVGPIYM--------- 85 (257)
T ss_dssp HHHHHHHHHTTCCEEEECTTTSCTTCCH------------------HHHHHHHHHHHHTTCEEEEEEEEEE---------
T ss_pred HHHHHHHHHhCCCEEEEecccCCCCCCH------------------HHHHHHHHHHHHcCCeEEEEecccc---------
Q ss_pred CCCCCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCCCCCCCCccChHHHHHHHHHhCCCcc
Q 025159 186 AKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTIWGSNRVMECEVLKEIAEAKGKTVA 253 (257)
Q Consensus 186 ~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~l~~~~~~~~~~~~~~ia~~~~~s~~ 253 (257)
.....-...+++|++.|+..+...|=.. ....+.++|+++|+...
T Consensus 86 ------------~~~~~~~~~i~~A~~lGa~~v~~~p~~~-----------~l~~l~~~a~~~gv~l~ 130 (257)
T 3lmz_A 86 ------------KSEEEIDRAFDYAKRVGVKLIVGVPNYE-----------LLPYVDKKVKEYDFHYA 130 (257)
T ss_dssp ------------CSHHHHHHHHHHHHHHTCSEEEEEECGG-----------GHHHHHHHHHHHTCEEE
T ss_pred ------------CCHHHHHHHHHHHHHhCCCEEEecCCHH-----------HHHHHHHHHHHcCCEEE
No 225
>1x87_A Urocanase protein; structural genomics, protein STR initiative, MCSG, PSI, midwest center for structural genomi; HET: MSE NAD; 2.40A {Geobacillus stearothermophilus} SCOP: e.51.1.1
Probab=34.32 E-value=1.1e+02 Score=27.62 Aligned_cols=85 Identities=11% Similarity=0.155 Sum_probs=62.3
Q ss_pred CCCcEEEEeccCCC------------------CCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCC
Q 025159 84 SRDELFIASKLWCS------------------DAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDF 145 (257)
Q Consensus 84 ~R~~l~i~tK~~~~------------------~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~ 145 (257)
-+..+||++-++.= ..++..+ -+|+.+.|+|.+. +
T Consensus 160 L~G~~~lTaGLGGMgGAQplA~~mag~v~i~~Evd~~ri-------~~R~~~gyld~~~-~------------------- 212 (551)
T 1x87_A 160 LAGTITLTAGLGGMGGAQPLAVTMNGGVCLAIEVDPARI-------QRRIDTNYLDTMT-D------------------- 212 (551)
T ss_dssp CTTCEEEEECCSTTGGGHHHHHHHTTCEEEEEESCHHHH-------HHHHHTTSCSEEE-S-------------------
T ss_pred CCceEEEEecCCccchhhHHHHHHcCceEEEEEECHHHH-------HHHHhCCCceeEc-C-------------------
Confidence 57889999988531 2344444 3566678988753 1
Q ss_pred CCccHHHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHhCC-CCCceeccccC
Q 025159 146 LPMDFKSVWEAMEECQNLGYTKAIGVSNFSCKKLGDILATAK-IPPAANQVEMN 198 (257)
Q Consensus 146 ~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~-~~p~~~q~~~~ 198 (257)
+++++++...+.+++|+...||+-..-.+.++++++..- ++...-|.+.+
T Consensus 213 ---~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l~~~~i~~DlvtDQTSaH 263 (551)
T 1x87_A 213 ---SLDAALEMAKQAKEEKKALSIGLVGNAAEVLPRLVETGFVPDVLTDQTSAH 263 (551)
T ss_dssp ---CHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHHTTCCCSEECCCSCTT
T ss_pred ---CHHHHHHHHHHHHHcCCceEEEEeccHHHHHHHHHHCCCCCCCCCCCcccc
Confidence 278999999999999999999999999999999988742 33345566543
No 226
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=34.29 E-value=1e+02 Score=27.21 Aligned_cols=124 Identities=13% Similarity=0.152 Sum_probs=61.4
Q ss_pred HHHHHHHHcCCceeeCCCCCC------------ChHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHH
Q 025159 44 LAILEAMKLGYRHFDTATLYQ------------TEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKS 111 (257)
Q Consensus 44 ~~l~~Al~~Gi~~~DtA~~Yg------------~e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~s 111 (257)
+.++...+.|++.+...-.-+ +..-+-++++.+.+.|+ ..=.+.+.. +-+..+.+.+.+.++..
T Consensus 154 e~l~~L~~~G~~rislGvQS~~~~~l~~i~R~~~~~~~~~ai~~~r~~G~--~~v~~dlI~--GlPget~e~~~~tl~~~ 229 (457)
T 1olt_A 154 DVLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGF--TSTNIDLIY--GLPKQTPESFAFTLKRV 229 (457)
T ss_dssp HHHHHHHHTTCCEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTTC--CSCEEEEEE--SCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeeccCCHHHHHHhCCCCCHHHHHHHHHHHHHcCC--CcEEEEEEc--CCCCCCHHHHHHHHHHH
Confidence 344455567888764332111 23334455555533343 112222222 33345678888888876
Q ss_pred HHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCC--ccHHHHHHHHHHHHHcCCeeEEEecCCC
Q 025159 112 LENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLP--MDFKSVWEAMEECQNLGYTKAIGVSNFS 175 (257)
Q Consensus 112 L~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~l~~~G~ir~iGvs~~~ 175 (257)
. .|+.+++.++.+. +.+..+..... ........ ...+..-.+.+.|.+.|. ..+++|||.
T Consensus 230 ~-~l~~~~i~~y~l~-~~p~t~~~~~~-~~~~~lp~~~~~~~~~~~~~~~L~~~Gy-~~yeis~fa 291 (457)
T 1olt_A 230 A-ELNPDRLSVFNYA-HLPTIFAAQRK-IKDADLPSPQQKLDILQETIAFLTQSGY-QFIGMDHFA 291 (457)
T ss_dssp H-HHCCSEEEEEECC-CCTTTSGGGGG-SCGGGSCCHHHHHHHHHHHHHHHHHTTC-EEEETTEEE
T ss_pred H-hcCcCEEEeecCc-CCcCchhHhhc-cccCCCcCHHHHHHHHHHHHHHHHHCCC-eEEEechhc
Confidence 5 6999999888776 22221100000 00000111 011123334456777785 679999985
No 227
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=33.97 E-value=1.9e+02 Score=23.83 Aligned_cols=78 Identities=15% Similarity=0.175 Sum_probs=50.4
Q ss_pred CeeEEEecCCCHHHHHHHHHhCCCC--------------CceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCCCC
Q 025159 165 YTKAIGVSNFSCKKLGDILATAKIP--------------PAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTIW 230 (257)
Q Consensus 165 ~ir~iGvs~~~~~~l~~~~~~~~~~--------------p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~l~ 230 (257)
.++-++|++-+++..+++.+..+++ ++++-+ ..+-....++...|-++|+.|+.=.|++.
T Consensus 28 ~~~l~av~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i-~tp~~~H~~~~~~al~~GkhVl~EKP~a~----- 101 (334)
T 3ohs_X 28 EHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYV-GTQHPQHKAAVMLCLAAGKAVLCEKPMGV----- 101 (334)
T ss_dssp TEEEEEEECSSHHHHHHHHHHHTCSCEESSHHHHHHCTTCCEEEE-CCCGGGHHHHHHHHHHTTCEEEEESSSSS-----
T ss_pred CeEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEE-CCCcHHHHHHHHHHHhcCCEEEEECCCCC-----
Confidence 3667888888888777765544332 111111 11111225677888899999999999986
Q ss_pred CCCCccChHHHHHHHHHhCCC
Q 025159 231 GSNRVMECEVLKEIAEAKGKT 251 (257)
Q Consensus 231 ~~~~~~~~~~~~~ia~~~~~s 251 (257)
+......+.+.|++.|+.
T Consensus 102 ---~~~e~~~l~~~a~~~~~~ 119 (334)
T 3ohs_X 102 ---NAAEVREMVTEARSRGLF 119 (334)
T ss_dssp ---SHHHHHHHHHHHHHTTCC
T ss_pred ---CHHHHHHHHHHHHHhCCE
Confidence 344557777888888763
No 228
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=33.96 E-value=2.1e+02 Score=23.89 Aligned_cols=82 Identities=17% Similarity=0.112 Sum_probs=51.7
Q ss_pred HHHHcCCeeEEEecCCCHHHHH-------------HHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCC
Q 025159 159 ECQNLGYTKAIGVSNFSCKKLG-------------DILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGA 225 (257)
Q Consensus 159 ~l~~~G~ir~iGvs~~~~~~l~-------------~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~ 225 (257)
.+.+...++-++|++-+++..+ ++++..+++.+++- .+-....++...|-++|+.|+.=.|++.
T Consensus 26 ~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~---tp~~~H~~~~~~al~aGkhV~~EKPla~ 102 (352)
T 3kux_A 26 LIMGTPGLELAGVSSSDASKVHADWPAIPVVSDPQMLFNDPSIDLIVIP---TPNDTHFPLAQSALAAGKHVVVDKPFTV 102 (352)
T ss_dssp HHHTSTTEEEEEEECSCHHHHHTTCSSCCEESCHHHHHHCSSCCEEEEC---SCTTTHHHHHHHHHHTTCEEEECSSCCS
T ss_pred HHhhCCCcEEEEEECCCHHHHHhhCCCCceECCHHHHhcCCCCCEEEEe---CChHHHHHHHHHHHHCCCcEEEECCCcC
Confidence 3455556777888888877654 22222223322221 1222235788888899999999999976
Q ss_pred CCCCCCCCCccChHHHHHHHHHhCCC
Q 025159 226 RGTIWGSNRVMECEVLKEIAEAKGKT 251 (257)
Q Consensus 226 ~G~l~~~~~~~~~~~~~~ia~~~~~s 251 (257)
.......+.+.|++.|+.
T Consensus 103 --------~~~e~~~l~~~a~~~g~~ 120 (352)
T 3kux_A 103 --------TLSQANALKEHADDAGLL 120 (352)
T ss_dssp --------CHHHHHHHHHHHHHTTCC
T ss_pred --------CHHHHHHHHHHHHHcCCe
Confidence 344557778888888764
No 229
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=33.94 E-value=90 Score=24.65 Aligned_cols=33 Identities=15% Similarity=0.168 Sum_probs=25.3
Q ss_pred ccceeCCcCCCCChhHHHHHHHHHHHcCCceeeCCC
Q 025159 26 VLGLGTAASPFSGSETTKLAILEAMKLGYRHFDTAT 61 (257)
Q Consensus 26 ~lglG~~~~~~~~~~~~~~~l~~Al~~Gi~~~DtA~ 61 (257)
+||+-++.+.. ....+.++.+-+.|++.++...
T Consensus 11 klg~~~~~~~~---~~~~~~l~~~~~~G~~~vEl~~ 43 (262)
T 3p6l_A 11 RLGMQSYSFHL---FPLTEALDKTQELGLKYIEIYP 43 (262)
T ss_dssp EEEEEGGGGTT---SCHHHHHHHHHHTTCCEEEECT
T ss_pred EEEEEecccCC---CCHHHHHHHHHHcCCCEEeecC
Confidence 46777777643 3478889999999999999875
No 230
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=33.93 E-value=75 Score=27.57 Aligned_cols=66 Identities=11% Similarity=0.034 Sum_probs=46.9
Q ss_pred HHHHHHHHcCCee-EEEecCCCHHHHHHHHHhCCCCCceeccccCCCCC---cHHHHHHHHHCCceEEEecC
Q 025159 155 EAMEECQNLGYTK-AIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQ---QNKLREFCKAKDIQLAAYAP 222 (257)
Q Consensus 155 ~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~---~~~~~~~~~~~gi~v~~~~p 222 (257)
+.+.++++.-.|- ..|=+-++++.+.++++...++ ++|....-+.- -..+.+.|+++|+.++.+++
T Consensus 251 ~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~d--~v~~d~~~~GGit~~~kia~~A~~~gi~~~~h~~ 320 (400)
T 4dxk_A 251 SSLTRYAAVSPAPISASETLGSRWAFRDLLETGAAG--VVMLDISWCGGLSEARKIASMAEAWHLPVAPHXC 320 (400)
T ss_dssp GGHHHHHHHCSSCEEECTTCCHHHHHHHHHHTTCCC--EEEECTTTTTHHHHHHHHHHHHHHTTCCEEEC-C
T ss_pred HHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCC--EEEeCccccCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 4566676655553 4455677889999998876655 78777665432 36789999999999988764
No 231
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=33.88 E-value=1.6e+02 Score=23.96 Aligned_cols=85 Identities=14% Similarity=0.077 Sum_probs=54.5
Q ss_pred HHHHHcCCeeEEEecCCCHHHHHHHHHhCCCCC-----------ceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCC
Q 025159 158 EECQNLGYTKAIGVSNFSCKKLGDILATAKIPP-----------AANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGAR 226 (257)
Q Consensus 158 ~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~p-----------~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~ 226 (257)
..+.+...++-++|++-+++..+++.+..+++. +++-+ ..+-....++...|-++|+.|+.-.|++.
T Consensus 24 ~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~ll~~~D~V~i-~tp~~~h~~~~~~al~~gk~vl~EKP~~~- 101 (308)
T 3uuw_A 24 PILTKSERFEFVGAFTPNKVKREKICSDYRIMPFDSIESLAKKCDCIFL-HSSTETHYEIIKILLNLGVHVYVDKPLAS- 101 (308)
T ss_dssp HHHTSCSSSEEEEEECSCHHHHHHHHHHHTCCBCSCHHHHHTTCSEEEE-CCCGGGHHHHHHHHHHTTCEEEECSSSSS-
T ss_pred HHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHHhcCCEEEE-eCCcHhHHHHHHHHHHCCCcEEEcCCCCC-
Confidence 345555567778899998888777765543321 11100 01111125677788899999999999986
Q ss_pred CCCCCCCCccChHHHHHHHHHhCCC
Q 025159 227 GTIWGSNRVMECEVLKEIAEAKGKT 251 (257)
Q Consensus 227 G~l~~~~~~~~~~~~~~ia~~~~~s 251 (257)
.......+.+.|++.|+.
T Consensus 102 -------~~~~~~~l~~~a~~~g~~ 119 (308)
T 3uuw_A 102 -------TVSQGEELIELSTKKNLN 119 (308)
T ss_dssp -------SHHHHHHHHHHHHHHTCC
T ss_pred -------CHHHHHHHHHHHHHcCCE
Confidence 344557778888888764
No 232
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=33.75 E-value=1.8e+02 Score=25.98 Aligned_cols=142 Identities=13% Similarity=0.050 Sum_probs=79.4
Q ss_pred CCChHHHHHHHHHHHhCCCCCC-CCcEEEEeccCCC--CCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCC
Q 025159 63 YQTEQPLGDAIAEALSTGIIKS-RDELFIASKLWCS--DAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFP 139 (257)
Q Consensus 63 Yg~e~~lg~~l~~~~~~~~~~~-R~~l~i~tK~~~~--~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~ 139 (257)
+|.++.+-+++++.++.. + -+-++|.|-+-+. ..+.+.+.+.++ ++++ ++++.+|.|.....
T Consensus 125 fGg~~kL~~~I~~~~~~~---~~P~~I~V~tTC~~e~IGdDl~~v~~~~~---~~~~---~pVi~v~tpgf~g~------ 189 (492)
T 3u7q_A 125 FGGDKKLAKLIDEVETLF---PLNKGISVQSECPIGLIGDDIESVSKVKG---AELS---KTIVPVRCEGFRGV------ 189 (492)
T ss_dssp HCSHHHHHHHHHHHHHHC---TTCCCEEEEECTHHHHTTCCHHHHHHHHH---HHHT---CCEEEECCCTTSSS------
T ss_pred CCcHHHHHHHHHHHHHhC---CCCCEEEEECCcHHHHHhcCHHHHHHHHH---HhhC---CcEEEecCCCCCCC------
Confidence 356777778888776554 3 4667888776332 223344444444 3445 57899998865320
Q ss_pred CcccCCCCccHHHHHHHHHH-HHHc-----------CCeeEEEecCC--CHHHHHHHHHhCCCCCceecc----------
Q 025159 140 IKKEDFLPMDFKSVWEAMEE-CQNL-----------GYTKAIGVSNF--SCKKLGDILATAKIPPAANQV---------- 195 (257)
Q Consensus 140 ~~~~~~~~~~~~~~~~~l~~-l~~~-----------G~ir~iGvs~~--~~~~l~~~~~~~~~~p~~~q~---------- 195 (257)
........+.++|-+ +.+. ++|--||-.++ +.+++.++++..++.+...--
T Consensus 190 -----s~~~G~~~a~~al~~~l~~~~~~~~~~~~~~~~VNIiG~~~~~gD~~eik~lL~~~Gi~v~~~~~g~~t~~ei~~ 264 (492)
T 3u7q_A 190 -----SQSLGHHIANDAVRDWVLGKRDEDTTFASTPYDVAIIGDYNIGGDAWSSRILLEEMGLRCVAQWSGDGSISEIEL 264 (492)
T ss_dssp -----SHHHHHHHHHHHHHHHTTTTTTTCCCCCCCTTEEEEEEECCBTTTTHHHHHHHHHTTCEEEEEEETTCCHHHHHH
T ss_pred -----chhHHHHHHHHHHHHHHhhhcccccccCCCCCcEEEECCCCChhhHHHHHHHHHHCCCeEEEEeCCCCCHHHHHh
Confidence 001113334455544 4322 46778886544 578899999998877432210
Q ss_pred ----ccCCCCCc---HHHHHHH-HHCCceEEEecCCC
Q 025159 196 ----EMNPLWQQ---NKLREFC-KAKDIQLAAYAPLG 224 (257)
Q Consensus 196 ----~~~~~~~~---~~~~~~~-~~~gi~v~~~~pl~ 224 (257)
.+|+.... ...-++. +++|++.+...|++
T Consensus 265 ~~~A~~niv~~~~~~~~~A~~Le~~~GiP~i~~~p~G 301 (492)
T 3u7q_A 265 TPKVKLNLVHCYRSMNYISRHMEEKYGIPWMEYNFFG 301 (492)
T ss_dssp GGGCSEEEESCHHHHHHHHHHHHHHHCCCEEECCCSS
T ss_pred hhcCcEEEEEChHHHHHHHHHHHHHhCCceEecCccC
Confidence 11111111 2333444 46699999887764
No 233
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=33.74 E-value=2.4e+02 Score=26.43 Aligned_cols=34 Identities=12% Similarity=0.220 Sum_probs=23.6
Q ss_pred HHHHHHHHHcCCeeEEEecCC-CHHHHHHHHHhCC
Q 025159 154 WEAMEECQNLGYTKAIGVSNF-SCKKLGDILATAK 187 (257)
Q Consensus 154 ~~~l~~l~~~G~ir~iGvs~~-~~~~l~~~~~~~~ 187 (257)
+....++++.=.+--|++..+ +++..+++++...
T Consensus 280 ~~~~~~i~~~~~~pvi~~G~i~~~~~a~~~l~~g~ 314 (729)
T 1o94_A 280 IPWVKLVKQVSKKPVLGVGRYTDPEKMIEIVTKGY 314 (729)
T ss_dssp HHHHHHHHTTCSSCEECCSCCCCHHHHHHHHHTTS
T ss_pred HHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHCCC
Confidence 445556666656677888777 5888888887654
No 234
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=33.04 E-value=1.5e+02 Score=24.69 Aligned_cols=85 Identities=7% Similarity=-0.037 Sum_probs=53.0
Q ss_pred HHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCC-------------CceeccccCCCCCcHHHHHHHHHCCceEEEecCC
Q 025159 157 MEECQNLGYTKAIGVSNFSCKKLGDILATAKIP-------------PAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPL 223 (257)
Q Consensus 157 l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~-------------p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl 223 (257)
+..|.+...++-+++++-+++.++++.+..+.+ ++++-+ ..+-....++...|-++|+.|+.-.|+
T Consensus 20 ~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~D~V~i-~tp~~~h~~~~~~al~~gk~v~~EKP~ 98 (344)
T 3euw_A 20 AANIAANPDLELVVIADPFIEGAQRLAEANGAEAVASPDEVFARDDIDGIVI-GSPTSTHVDLITRAVERGIPALCEKPI 98 (344)
T ss_dssp HHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCEEESSHHHHTTCSCCCEEEE-CSCGGGHHHHHHHHHHTTCCEEECSCS
T ss_pred HHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEE-eCCchhhHHHHHHHHHcCCcEEEECCC
Confidence 344555666888999999998888776654311 111110 011111256778888999999999999
Q ss_pred CCCCCCCCCCCccChHHHHHHHHHhCC
Q 025159 224 GARGTIWGSNRVMECEVLKEIAEAKGK 250 (257)
Q Consensus 224 ~~~G~l~~~~~~~~~~~~~~ia~~~~~ 250 (257)
+. .......+.+.|++.|+
T Consensus 99 ~~--------~~~~~~~l~~~a~~~g~ 117 (344)
T 3euw_A 99 DL--------DIEMVRACKEKIGDGAS 117 (344)
T ss_dssp CS--------CHHHHHHHHHHHGGGGG
T ss_pred CC--------CHHHHHHHHHHHHhcCC
Confidence 75 23344566666666664
No 235
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=32.90 E-value=1.5e+02 Score=24.19 Aligned_cols=86 Identities=10% Similarity=0.052 Sum_probs=49.5
Q ss_pred cHHHHHHHHHHHHHc-CCeeEEEecCCCH------HHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEE-Ee
Q 025159 149 DFKSVWEAMEECQNL-GYTKAIGVSNFSC------KKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLA-AY 220 (257)
Q Consensus 149 ~~~~~~~~l~~l~~~-G~ir~iGvs~~~~------~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~-~~ 220 (257)
....+++.+.++++. -.+--+..+-+++ +.+.+.+..++++-.++ +--+.....++++.|+++|+..+ ..
T Consensus 78 ~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii--~Dlp~ee~~~~~~~~~~~gl~~i~li 155 (267)
T 3vnd_A 78 TSSDCFDIITKVRAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLI--ADVPVEESAPFSKAAKAHGIAPIFIA 155 (267)
T ss_dssp CHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEE--TTSCGGGCHHHHHHHHHTTCEEECEE
T ss_pred CHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEe--CCCCHhhHHHHHHHHHHcCCeEEEEE
Confidence 345667888888876 3555444444354 44444445555553333 11122334689999999999865 32
Q ss_pred cCCCCCCCCCCCCCccChHHHHHHHHHh
Q 025159 221 APLGARGTIWGSNRVMECEVLKEIAEAK 248 (257)
Q Consensus 221 ~pl~~~G~l~~~~~~~~~~~~~~ia~~~ 248 (257)
+|-. ..++++.+++.-
T Consensus 156 aP~t------------~~eri~~i~~~~ 171 (267)
T 3vnd_A 156 PPNA------------DADTLKMVSEQG 171 (267)
T ss_dssp CTTC------------CHHHHHHHHHHC
T ss_pred CCCC------------CHHHHHHHHHhC
Confidence 2322 246777777753
No 236
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=32.66 E-value=1.1e+02 Score=27.68 Aligned_cols=123 Identities=13% Similarity=0.122 Sum_probs=80.6
Q ss_pred HHHHHHHHHcCCcee--eCCCCC---CC-------hHHHHHHHHHHHhCCCCCCCCcEEEEeccCCC-------------
Q 025159 43 KLAILEAMKLGYRHF--DTATLY---QT-------EQPLGDAIAEALSTGIIKSRDELFIASKLWCS------------- 97 (257)
Q Consensus 43 ~~~l~~Al~~Gi~~~--DtA~~Y---g~-------e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~------------- 97 (257)
-+-.++.-..|+..+ =||.+| |+ ..-+..+-+++|-.. -+..+||++-++.=
T Consensus 111 ~e~f~~l~~~Gl~mYGQMTAGsw~YIG~QGIvqGTyeT~~~~~rk~~gg~---L~G~~~lTaGLGGMgGAQplA~~mag~ 187 (552)
T 2fkn_A 111 WEHFHELEKKGLMMYGQMTAGSWIYIGSQGILQGTYETFAELARQHFGGS---LKGTLTLTAGLGGMGGAQPLSVTMNEG 187 (552)
T ss_dssp HHHHHHHHHTTCCCBCTTTTTTTCCCTTHHHHHHHHHHHHHHHHHHSSSC---CTTCEEEEECCSTTTTHHHHHHHHTTC
T ss_pred HHHHHHHHHcccccccCccccceeeecCcceeecHHHHHHHHHHHhcCCC---CCceEEEEecCCccchhhHHHHHHcCc
Confidence 445566667787754 244443 22 333344444554222 57889999988531
Q ss_pred -----CCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEEec
Q 025159 98 -----DAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGVS 172 (257)
Q Consensus 98 -----~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs 172 (257)
..++..+ -+|+.+.|+|.+. . +++++++...+.+++|+...||+-
T Consensus 188 v~i~~Evd~~ri-------~~R~~~gyld~~~-~----------------------~ldeal~~~~~a~~~~~~~SIg~~ 237 (552)
T 2fkn_A 188 VVIAVEVDEKRI-------DKRIETKYCDRKT-A----------------------SIEEALAWAEEAKLAGKPLSIALL 237 (552)
T ss_dssp EEEEEESCHHHH-------HHHHHTTSCSEEE-S----------------------CHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred eEEEEEECHHHH-------HHHHhCCcceeEc-C----------------------CHHHHHHHHHHHHHcCCceEEEEe
Confidence 2344444 3566678988753 1 278999999999999999999999
Q ss_pred CCCHHHHHHHHHhCC-CCCceeccccC
Q 025159 173 NFSCKKLGDILATAK-IPPAANQVEMN 198 (257)
Q Consensus 173 ~~~~~~l~~~~~~~~-~~p~~~q~~~~ 198 (257)
..-.+.++++++..- ++...-|.+.+
T Consensus 238 GNaadv~~~l~~~~i~~DlvtDQTSaH 264 (552)
T 2fkn_A 238 GNAAEVHHTLLNRGVKIDIVTDQTSAH 264 (552)
T ss_dssp SCHHHHHHHHHTTTCCCSEECCCSCTT
T ss_pred ccHHHHHHHHHHCCCCCCCCCCCcccc
Confidence 999999999988742 33345566543
No 237
>3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A*
Probab=32.55 E-value=71 Score=27.70 Aligned_cols=87 Identities=16% Similarity=0.067 Sum_probs=55.6
Q ss_pred HHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHH------cCCeeEEEecCCCHHHHHHHH
Q 025159 110 KSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQN------LGYTKAIGVSNFSCKKLGDIL 183 (257)
Q Consensus 110 ~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~------~G~ir~iGvs~~~~~~l~~~~ 183 (257)
+.+++|. .+++.++..|... + ++.+.++++ .+---+.|=+.+ ...+.+++
T Consensus 219 ~~~~~L~--~~~l~~iEeP~~~-----------------d----~~~~~~l~~~~~~~~~~ipIa~gE~~~-~~~~~~li 274 (392)
T 3v5c_A 219 EVLAALS--DVNLYWLEAAFHE-----------------D----EALYEDLKEWLGQRGQNVLIADGEGLA-SPHLIEWA 274 (392)
T ss_dssp HHHHHTT--TSCCCEEECSSSC-----------------C----HHHHHHHHHHHHHHTCCCEEEECCSSC-CTTHHHHH
T ss_pred HHHHhcc--cCCCeEEeCCCCc-----------------C----HHHHHHHHHhhccCCCCCcEECCCccc-HHHHHHHH
Confidence 3445553 3588888888431 1 233444444 234456677777 67788888
Q ss_pred HhCCCCCceeccccCCCC--CcHHHHHHHHHCCceEEEecC
Q 025159 184 ATAKIPPAANQVEMNPLW--QQNKLREFCKAKDIQLAAYAP 222 (257)
Q Consensus 184 ~~~~~~p~~~q~~~~~~~--~~~~~~~~~~~~gi~v~~~~p 222 (257)
+...++ ++|....-.. .-..+.+.|+++|+.++.+++
T Consensus 275 ~~~a~d--ii~~d~~~GGitea~kia~~A~~~gv~~~~h~~ 313 (392)
T 3v5c_A 275 TRGRVD--VLQYDIIWPGFTHWMELGEKLDAHGLRSAPHCY 313 (392)
T ss_dssp HTTSCC--EECCBTTTBCHHHHHHHHHHHHHTTCEECCBCC
T ss_pred HcCCCc--EEEeCCCCCCHHHHHHHHHHHHHcCCeEEecCC
Confidence 766665 7777765411 125789999999999987764
No 238
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=32.54 E-value=1.9e+02 Score=23.45 Aligned_cols=95 Identities=8% Similarity=0.092 Sum_probs=57.9
Q ss_pred HHHHHHHHHHcCCeeEEEe--------cCCCHHHHHHHHHhCCCCCceeccccC------CCC----------Cc-----
Q 025159 153 VWEAMEECQNLGYTKAIGV--------SNFSCKKLGDILATAKIPPAANQVEMN------PLW----------QQ----- 203 (257)
Q Consensus 153 ~~~~l~~l~~~G~ir~iGv--------s~~~~~~l~~~~~~~~~~p~~~q~~~~------~~~----------~~----- 203 (257)
..+.++.+++.|. ..|-+ ...+++.+.++++..++.+.....++. +.. ++
T Consensus 31 ~~~~l~~~a~~G~-~~VEl~~~~~~~~~~~~~~~~~~~l~~~GL~v~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 109 (303)
T 3l23_A 31 VAANLRKVKDMGY-SKLELAGYGKGAIGGVPMMDFKKMAEDAGLKIISSHVNPVDTSISDPFKAMIFKYSKEVTPKIMEY 109 (303)
T ss_dssp HHHHHHHHHHTTC-CEEEECCEETTEETTEEHHHHHHHHHHTTCEEEEEECCCBCTTCSSTTTTBCCSCCTTTHHHHHHH
T ss_pred HHHHHHHHHHcCC-CEEEeccccCcccCCCCHHHHHHHHHHcCCeEEEEecccccccccCcccccccccchhhHHHHHHH
Confidence 4467777888885 23333 334688899999998888766655541 111 11
Q ss_pred -HHHHHHHHHCCceEEEecCCCCCCCCCCCCC----ccChHHHHHHHHHhCCC
Q 025159 204 -NKLREFCKAKDIQLAAYAPLGARGTIWGSNR----VMECEVLKEIAEAKGKT 251 (257)
Q Consensus 204 -~~~~~~~~~~gi~v~~~~pl~~~G~l~~~~~----~~~~~~~~~ia~~~~~s 251 (257)
...+++|++.|+..+....... . ..... ...-..+.+.|+++|++
T Consensus 110 ~~~~i~~A~~lG~~~v~~~~~~~-~--~~~~~~~~~~~~l~~l~~~a~~~Gv~ 159 (303)
T 3l23_A 110 WKATAADHAKLGCKYLIQPMMPT-I--TTHDEAKLVCDIFNQASDVIKAEGIA 159 (303)
T ss_dssp HHHHHHHHHHTTCSEEEECSCCC-C--CSHHHHHHHHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHcCCCEEEECCCCC-C--CCHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 4679999999999887632211 0 00000 00125566788888987
No 239
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=32.29 E-value=2.5e+02 Score=24.39 Aligned_cols=96 Identities=8% Similarity=0.032 Sum_probs=60.0
Q ss_pred ChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEE-Eec-CCCHH
Q 025159 100 HRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAI-GVS-NFSCK 177 (257)
Q Consensus 100 ~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~i-Gvs-~~~~~ 177 (257)
+++...+-+.+.|+. .++.++..|... +-|+.+.+|.+.-.|.-. |=+ ..++.
T Consensus 268 ~~~~ai~~~~~~l~~-----~~i~~iEeP~~~--------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~ 322 (427)
T 2pa6_A 268 TREELLDYYKALVDE-----YPIVSIEDPFHE--------------------EDFEGFAMITKELDIQIVGDDLFVTNVE 322 (427)
T ss_dssp CHHHHHHHHHHHHHH-----SCEEEEECCSCT--------------------TCHHHHHHHHHHSSSEEEESTTTTTCHH
T ss_pred CHHHHHHHHHHHHhh-----CCCcEEEcCCCh--------------------hhHHHHHHHHhhCCCeEEeCccccCCHH
Confidence 344444444445554 468889988542 124666677766555432 233 23489
Q ss_pred HHHHHHHhCCCCCceeccccCCCCC---cHHHHHHHHHCCceEEE-ecC
Q 025159 178 KLGDILATAKIPPAANQVEMNPLWQ---QNKLREFCKAKDIQLAA-YAP 222 (257)
Q Consensus 178 ~l~~~~~~~~~~p~~~q~~~~~~~~---~~~~~~~~~~~gi~v~~-~~p 222 (257)
.+.++++...++ ++|+..+-+.- -..+.+.|+++|+.++. +..
T Consensus 323 ~~~~~i~~~a~d--~i~ik~~~~GGitea~~ia~lA~~~g~~~~~~h~~ 369 (427)
T 2pa6_A 323 RLRKGIEMKAAN--ALLLKVNQIGTLSEAVDAAQLAFRNGYGVVVSHRS 369 (427)
T ss_dssp HHHHHHHHTCCS--EEEECHHHHCSHHHHHHHHHHHHTTTCEEEEECCS
T ss_pred HHHHHHHhCCCC--EEEEcccccCCHHHHHHHHHHHHHcCCeEEEeCCC
Confidence 999998876655 66666543222 25789999999999876 433
No 240
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=32.07 E-value=1.1e+02 Score=24.02 Aligned_cols=67 Identities=9% Similarity=0.151 Sum_probs=40.3
Q ss_pred HHHHHHHHcCCeeEEEecC----------CCHHHHHHHHHhCCCCCceecccc--CCCCCc-----HHHHHHHHHCCceE
Q 025159 155 EAMEECQNLGYTKAIGVSN----------FSCKKLGDILATAKIPPAANQVEM--NPLWQQ-----NKLREFCKAKDIQL 217 (257)
Q Consensus 155 ~~l~~l~~~G~ir~iGvs~----------~~~~~l~~~~~~~~~~p~~~q~~~--~~~~~~-----~~~~~~~~~~gi~v 217 (257)
+.++.+++.|. ..|-+.. ...+.+.++++..++.+......+ +..... ...++.|++.|+..
T Consensus 23 ~~l~~~~~~G~-~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~ 101 (272)
T 2q02_A 23 AFFRLVKRLEF-NKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIVTINAVYPFNQLTEEVVKKTEGLLRDAQGVGARA 101 (272)
T ss_dssp HHHHHHHHTTC-CEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEEEEEEETTTTSCCHHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHcCC-CEEEeeccccccccccccCHHHHHHHHHHcCCeEEechhhhccCCcHHHHHHHHHHHHHHHHHhCCCE
Confidence 44555666664 3444432 246678888888887765544333 221111 56788889989888
Q ss_pred EEecC
Q 025159 218 AAYAP 222 (257)
Q Consensus 218 ~~~~p 222 (257)
+...|
T Consensus 102 v~~~~ 106 (272)
T 2q02_A 102 LVLCP 106 (272)
T ss_dssp EEECC
T ss_pred EEEcc
Confidence 87644
No 241
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=32.06 E-value=1.1e+02 Score=27.65 Aligned_cols=123 Identities=11% Similarity=0.104 Sum_probs=80.5
Q ss_pred HHHHHHHHHcCCcee--eCCCCC---CC-------hHHHHHHHHHHHhCCCCCCCCcEEEEeccCCC-------------
Q 025159 43 KLAILEAMKLGYRHF--DTATLY---QT-------EQPLGDAIAEALSTGIIKSRDELFIASKLWCS------------- 97 (257)
Q Consensus 43 ~~~l~~Al~~Gi~~~--DtA~~Y---g~-------e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~------------- 97 (257)
-+-.++.-..|+..+ =||.+| |+ ..-+..+-+++|-.. -+..+||++-++.=
T Consensus 115 ~e~f~~l~~~Gl~mYGQMTAGsw~YIG~QGIvqGTyeT~~~~~rk~~gg~---L~G~~~lTaGLGGMgGAQplA~~mag~ 191 (557)
T 1uwk_A 115 WEHFNELDAKGLAMYGQMTAGSWIYIGSQGIVQGTYETFVEAGRQHYGGS---LKGKWVLTAGLGGMGGAQPLAATLAGA 191 (557)
T ss_dssp HHHHHHHHHTTCCCBCTTTTTTTCCCTTHHHHHHHHHHHHHHHHHHTSSC---CTTCEEEEECCSTTTTHHHHHHHHTTC
T ss_pred HHHHHHHHHcccccccCccccceeeecCcceeecHHHHHHHHHHHhcCCC---CCceEEEEecCCccchhhHHHHHHcCc
Confidence 445566667787754 244443 22 333344444554222 57889999988531
Q ss_pred -----CCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEEec
Q 025159 98 -----DAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGVS 172 (257)
Q Consensus 98 -----~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs 172 (257)
..++..+ -+|+.+.|+|.+. . +++++++...+.+++|+...||+-
T Consensus 192 v~i~~Evd~~ri-------~~R~~~gyld~~~-~----------------------~ldeal~~~~~a~~~~~~~SIg~~ 241 (557)
T 1uwk_A 192 CSLNIESQQSRI-------DFRLETRYVDEQA-T----------------------DLDDALVRIAKYTAEGKAISIALH 241 (557)
T ss_dssp EEEEEESCHHHH-------HHHHHTTSCCEEC-S----------------------SHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred eEEEEEECHHHH-------HHHHhCCCceeEc-C----------------------CHHHHHHHHHHHHHcCCceEEEEe
Confidence 2344444 3566678888642 1 278999999999999999999999
Q ss_pred CCCHHHHHHHHHhCC-CCCceeccccC
Q 025159 173 NFSCKKLGDILATAK-IPPAANQVEMN 198 (257)
Q Consensus 173 ~~~~~~l~~~~~~~~-~~p~~~q~~~~ 198 (257)
..-.+.++++++..- ++...-|.+.+
T Consensus 242 GNaadv~~~l~~~~i~~DlvtDQTSaH 268 (557)
T 1uwk_A 242 GNAAEILPELVKRGVRPDMVTDQTSAH 268 (557)
T ss_dssp SCHHHHHHHHHHHTCCCSEECCCSCTT
T ss_pred ccHHHHHHHHHHCCCCCCCCCCCcccc
Confidence 999999999988742 33345566543
No 242
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=31.84 E-value=2e+02 Score=25.02 Aligned_cols=88 Identities=10% Similarity=0.169 Sum_probs=56.5
Q ss_pred HHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCCC-------ceecc----ccC--CCC----CcHHHHHHHHHCCceEEE
Q 025159 157 MEECQNLGYTKAIGVSNFSCKKLGDILATAKIPP-------AANQV----EMN--PLW----QQNKLREFCKAKDIQLAA 219 (257)
Q Consensus 157 l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~p-------~~~q~----~~~--~~~----~~~~~~~~~~~~gi~v~~ 219 (257)
+..+.+.+.++-++|++-+.+..+++.+..+++. ....+ ... ... ...++...|-++|+.|+.
T Consensus 100 ~~~l~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~iatp~~~h~~~~~~al~aGk~Vl~ 179 (433)
T 1h6d_A 100 LPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGKHVMC 179 (433)
T ss_dssp HHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEE
T ss_pred HHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEEEcCCchhHHHHHHHHHHCCCcEEE
Confidence 4445556678888999999988887766554431 00000 000 001 125677788899999999
Q ss_pred ecCCCCCCCCCCCCCccChHHHHHHHHHhCCCc
Q 025159 220 YAPLGARGTIWGSNRVMECEVLKEIAEAKGKTV 252 (257)
Q Consensus 220 ~~pl~~~G~l~~~~~~~~~~~~~~ia~~~~~s~ 252 (257)
-.|++. .......+.+.|++.|+..
T Consensus 180 EKPla~--------~~~e~~~l~~~a~~~g~~~ 204 (433)
T 1h6d_A 180 EKPMAT--------SVADCQRMIDAAKAANKKL 204 (433)
T ss_dssp CSSCCS--------SHHHHHHHHHHHHHHTCCE
T ss_pred cCCCCC--------CHHHHHHHHHHHHHhCCeE
Confidence 999975 3344567888888888643
No 243
>4ggi_A UDP-2,3-diacylglucosamine pyrophosphatase LPXI; structural genomics, PSI-biology; HET: UDG; 2.52A {Caulobacter crescentus} PDB: 4ggm_X*
Probab=31.74 E-value=43 Score=27.75 Aligned_cols=42 Identities=12% Similarity=-0.073 Sum_probs=31.6
Q ss_pred HHHHHHHHHCCceEEEecCCCCCCCCCCCCCccChHHHHHHHHHhCCCcc
Q 025159 204 NKLREFCKAKDIQLAAYAPLGARGTIWGSNRVMECEVLKEIAEAKGKTVA 253 (257)
Q Consensus 204 ~~~~~~~~~~gi~v~~~~pl~~~G~l~~~~~~~~~~~~~~ia~~~~~s~~ 253 (257)
.+.++.|.+.|+..++..|=+. -+++++.+-+.|.++|++..
T Consensus 234 ~dti~~~~~ag~~~ivi~~g~s--------i~~~~~~~i~~a~~~gi~~~ 275 (283)
T 4ggi_A 234 VATIHRAARAGLAGIVGEAGRL--------LVVDREAVIAAADDLGLFVL 275 (283)
T ss_dssp HHHHHHHHHTTCCEEEEETTBC--------EETTHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHcCCeEEEEcCCCc--------EEeCHHHHHHHHHHcCCEEE
Confidence 5789999999998887655322 13477888899999987653
No 244
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=31.50 E-value=1.8e+02 Score=24.44 Aligned_cols=79 Identities=8% Similarity=-0.038 Sum_probs=52.6
Q ss_pred CCeeEEEecCCCHHHHHHHHHhCCCC--------------CceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCCC
Q 025159 164 GYTKAIGVSNFSCKKLGDILATAKIP--------------PAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTI 229 (257)
Q Consensus 164 G~ir~iGvs~~~~~~l~~~~~~~~~~--------------p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~l 229 (257)
..++-++|++-+++..+++.+..+.. ++++- -.++-....++...|-+.|+.|+.=.|++.
T Consensus 49 ~~~~lvav~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~-I~tp~~~H~~~~~~al~aGkhVl~EKPla~---- 123 (361)
T 3u3x_A 49 AGARLAGFHEKDDALAAEFSAVYADARRIATAEEILEDENIGLIV-SAAVSSERAELAIRAMQHGKDVLVDKPGMT---- 123 (361)
T ss_dssp TTCEEEEEECSCHHHHHHHHHHSSSCCEESCHHHHHTCTTCCEEE-ECCCHHHHHHHHHHHHHTTCEEEEESCSCS----
T ss_pred CCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEE-EeCChHHHHHHHHHHHHCCCeEEEeCCCCC----
Confidence 45788999999998888876655421 11110 000111125778888899999999999986
Q ss_pred CCCCCccChHHHHHHHHHhCCC
Q 025159 230 WGSNRVMECEVLKEIAEAKGKT 251 (257)
Q Consensus 230 ~~~~~~~~~~~~~~ia~~~~~s 251 (257)
.......+.+.|++.|+.
T Consensus 124 ----~~~ea~~l~~~a~~~g~~ 141 (361)
T 3u3x_A 124 ----SFDQLAKLRRVQAETGRI 141 (361)
T ss_dssp ----SHHHHHHHHHHHHTTCCC
T ss_pred ----CHHHHHHHHHHHHHcCCE
Confidence 344567777888887764
No 245
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=31.44 E-value=50 Score=26.34 Aligned_cols=64 Identities=8% Similarity=0.093 Sum_probs=40.5
Q ss_pred HHHHHcCCeeEEEecCCCHHHHHHHHHhCC-CCCcee----------ccccCCCCC-------cHHHHHHHHHCCceEEE
Q 025159 158 EECQNLGYTKAIGVSNFSCKKLGDILATAK-IPPAAN----------QVEMNPLWQ-------QNKLREFCKAKDIQLAA 219 (257)
Q Consensus 158 ~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~-~~p~~~----------q~~~~~~~~-------~~~~~~~~~~~gi~v~~ 219 (257)
+.+++.|....+=+++|+...+.++.+... ++.... +..+..... ..++++.|+++|+.|.+
T Consensus 122 ~~l~~~~~~~~v~~~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~G~~v~~ 201 (238)
T 3no3_A 122 QMVKRMKLAKRTDYISFNMDACKEFIRLCPKSEVSYLNGELSPMELKELGFTGLDYHYKVLQSHPDWVKDCKVLGMTSNV 201 (238)
T ss_dssp HHHHHTTCGGGEEEEESCHHHHHHHHHHCTTSCEEECSSCSCHHHHHHTTCCEEEEEHHHHHHSTTHHHHHHHTTCEEEE
T ss_pred HHHHHcCCcCCEEEEECCHHHHHHHHHHCCCCeEEEEeCCCCHHHHHHCCCceEeccHHhhhCCHHHHHHHHHCCCEEEE
Confidence 344556766778899999999998877654 221110 011111111 13688999999999999
Q ss_pred ec
Q 025159 220 YA 221 (257)
Q Consensus 220 ~~ 221 (257)
|.
T Consensus 202 WT 203 (238)
T 3no3_A 202 WT 203 (238)
T ss_dssp EC
T ss_pred EC
Confidence 94
No 246
>2xdq_A Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=30.98 E-value=94 Score=27.38 Aligned_cols=59 Identities=12% Similarity=0.030 Sum_probs=34.4
Q ss_pred CCChHHHHHHHHHHHhCCCCCCCCcEEEEeccCCC--CCChhhHHHHHHHHHHhhCCCcccEEEeecCCC
Q 025159 63 YQTEQPLGDAIAEALSTGIIKSRDELFIASKLWCS--DAHRELVVPALQKSLENLQLEYIDLYVIHWPVS 130 (257)
Q Consensus 63 Yg~e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~--~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~ 130 (257)
+|.++-+-+++++..+.. +-+-++|.+-+-+. ..+.+.+-+.++ ++++ +.++.++.+..
T Consensus 79 ~Gg~ekL~~~i~~~~~~~---~P~~I~v~~TC~~~iIGdDi~~v~~~~~---~~~~---ipVi~v~~~Gf 139 (460)
T 2xdq_A 79 LNDYEELKRLCLEIKRDR---NPSVIVWIGTCTTEIIKMDLEGLAPKLE---AEIG---IPIVVARANGL 139 (460)
T ss_dssp SCHHHHHHHHHHHHHHHH---CCSEEEEEECHHHHHTTCCHHHHHHHHH---HHHS---SCEEEEECCTT
T ss_pred cCChHHHHHHHHHHHHhc---CCCEEEEECCCHHHHHhhCHHHHHHHHh---hccC---CcEEEEecCCc
Confidence 676666777777775443 23467777766321 223344444443 3445 68999998854
No 247
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=30.76 E-value=1.5e+02 Score=24.30 Aligned_cols=87 Identities=9% Similarity=-0.006 Sum_probs=53.9
Q ss_pred HHHHHcCCeeEEEecCCCHHHHHHHHHhCCCCCce---ecc---ccC------CCCCcHHHHHHHHHCCceEEEecCCCC
Q 025159 158 EECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAA---NQV---EMN------PLWQQNKLREFCKAKDIQLAAYAPLGA 225 (257)
Q Consensus 158 ~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~p~~---~q~---~~~------~~~~~~~~~~~~~~~gi~v~~~~pl~~ 225 (257)
..+.+.+.++-++|++-+++..+++.+..++.... ..+ ... +-....++...|-++|+.|+.-+|++.
T Consensus 18 ~~l~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~D~V~i~tp~~~h~~~~~~al~~gk~V~~EKP~~~ 97 (325)
T 2ho3_A 18 EAAHTSGEYQLVAIYSRKLETAATFASRYQNIQLFDQLEVFFKSSFDLVYIASPNSLHFAQAKAALSAGKHVILEKPAVS 97 (325)
T ss_dssp HHHHHTTSEEEEEEECSSHHHHHHHGGGSSSCEEESCHHHHHTSSCSEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCS
T ss_pred HHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeEeCCHHHHhCCCCCEEEEeCChHHHHHHHHHHHHcCCcEEEecCCcC
Confidence 34555666777899999888877765554321100 000 000 001124677788899999999999975
Q ss_pred CCCCCCCCCccChHHHHHHHHHhCCCc
Q 025159 226 RGTIWGSNRVMECEVLKEIAEAKGKTV 252 (257)
Q Consensus 226 ~G~l~~~~~~~~~~~~~~ia~~~~~s~ 252 (257)
+......+.+.|++.|+..
T Consensus 98 --------~~~~~~~l~~~a~~~g~~~ 116 (325)
T 2ho3_A 98 --------QPQEWFDLIQTAEKNNCFI 116 (325)
T ss_dssp --------SHHHHHHHHHHHHHTTCCE
T ss_pred --------CHHHHHHHHHHHHHcCCEE
Confidence 3344567788888887643
No 248
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=30.69 E-value=2.5e+02 Score=23.85 Aligned_cols=153 Identities=14% Similarity=0.087 Sum_probs=83.6
Q ss_pred ChhHHHHHHHHHHHcCCceeeCCCCCCC-hHHH--HHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHh
Q 025159 38 GSETTKLAILEAMKLGYRHFDTATLYQT-EQPL--GDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLEN 114 (257)
Q Consensus 38 ~~~~~~~~l~~Al~~Gi~~~DtA~~Yg~-e~~l--g~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~ 114 (257)
+.++..+.+..+++.|++.|-.--...+ +.-+ =+++++.+ | .+++.|..-... .++++...+-+ +.|+.
T Consensus 162 ~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avr~~~--g----~~~~~l~vDaN~-~~~~~~a~~~~-~~l~~ 233 (377)
T 2pge_A 162 EAAFMQEQIEAKLAEGYGCLKLKIGAIDFDKECALLAGIRESF--S----PQQLEIRVDANG-AFSPANAPQRL-KRLSQ 233 (377)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEC---CHHHHHHHHHHHHHHS--C----TTTCEEEEECTT-BBCTTTHHHHH-HHHHT
T ss_pred CHHHHHHHHHHHHHHhhhhheeecCCCChHHHHHHHHHHHHHc--C----CCCceEEEECCC-CCCHHHHHHHH-HHHhc
Confidence 5677777788888999998753211111 2222 12233331 1 044555555422 23444444333 44554
Q ss_pred hCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCee-EEEecCCCHHH--HHHHHHhCCCCCc
Q 025159 115 LQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTK-AIGVSNFSCKK--LGDILATAKIPPA 191 (257)
Q Consensus 115 Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~--l~~~~~~~~~~p~ 191 (257)
+ ++.++..|... +-|+.+.+|.++-.|. ..|=+-++... +.++++....+
T Consensus 234 ~-----~i~~iEqP~~~--------------------~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~i~~~a~d-- 286 (377)
T 2pge_A 234 F-----HLHSIEQPIRQ--------------------HQWSEMAALCANSPLAIALDEELIGLGAEQRSAMLDAIRPQ-- 286 (377)
T ss_dssp T-----CCSEEECCBCS--------------------SCHHHHHHHHHHCSSCEEESGGGTTCCTHHHHHHHHHHCCS--
T ss_pred C-----CCcEEEccCCc--------------------ccHHHHHHHHhhCCCcEEECCccCCcchHHHHHHHHhCCCC--
Confidence 3 56678888432 1255666676654443 34444444334 56776654444
Q ss_pred eeccccCCCCC---cHHHHHHHHHCCceEEEecCCCC
Q 025159 192 ANQVEMNPLWQ---QNKLREFCKAKDIQLAAYAPLGA 225 (257)
Q Consensus 192 ~~q~~~~~~~~---~~~~~~~~~~~gi~v~~~~pl~~ 225 (257)
++|+..+-+.- -..+.+.|+++|+.++..+.+.+
T Consensus 287 ~i~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es 323 (377)
T 2pge_A 287 YIILKPSLLGGFHYAGQWIELARERGIGFWITSALES 323 (377)
T ss_dssp EEEECHHHHTSHHHHHHHHHHHHHTTCEEEEBCCSCC
T ss_pred EEEECchhcCCHHHHHHHHHHHHHCCCeEEecCCccc
Confidence 66665543222 25788899999999998877643
No 249
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=30.49 E-value=2.2e+02 Score=23.25 Aligned_cols=132 Identities=11% Similarity=0.035 Sum_probs=71.6
Q ss_pred CCCCCCCCceecCCCCCcCCccceeCCcCCCCChhHHHHHHHHHHHcCCceeeCCCCC----CChHHHHHHHHHHHhCCC
Q 025159 6 EMGSISIPDVPLKSSNRRMPVLGLGTAASPFSGSETTKLAILEAMKLGYRHFDTATLY----QTEQPLGDAIAEALSTGI 81 (257)
Q Consensus 6 ~~~~~~m~~~~l~~~~~~vs~lglG~~~~~~~~~~~~~~~l~~Al~~Gi~~~DtA~~Y----g~e~~lg~~l~~~~~~~~ 81 (257)
+|....++...+|.| .|.++.-... .+.++....++.+.+.|...++.=-.| .....+.+.++.+...-
T Consensus 24 ~m~~v~v~~~~~g~g---~p~i~v~l~~---~~~~e~~~~~~~~~~~gaD~VElRvD~l~~~~~~~~v~~~l~~lr~~~- 96 (276)
T 3o1n_A 24 AMKTVTVRDLVVGEG---APKIIVSLMG---KTITDVKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREII- 96 (276)
T ss_dssp -CCCEEETTEEETSS---SCEEEEEECC---SSHHHHHHHHHHHTTSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHC-
T ss_pred CceEEEECCEEeCCC---CcEEEEEeCC---CCHHHHHHHHHHHhhCCCCEEEEEeccccccCcHHHHHHHHHHHHHhc-
Confidence 344344555666666 6666665444 467788888888877898876443333 12244555555442111
Q ss_pred CCCCCcEEEEecc----CCCCCChhhHHHHHHHHHHhhC-CCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHH
Q 025159 82 IKSRDELFIASKL----WCSDAHRELVVPALQKSLENLQ-LEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEA 156 (257)
Q Consensus 82 ~~~R~~l~i~tK~----~~~~~~~~~i~~~l~~sL~~Lg-~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (257)
..--+.++.+. +....+ +.-+..+-+..-++| .||+|+=+- .+ ++.++.
T Consensus 97 --~~~PiI~T~Rt~~eGG~~~~~-~~~~~~ll~~~l~~g~~dyIDvEl~-~~----------------------~~~~~~ 150 (276)
T 3o1n_A 97 --TDKPLLFTFRSAKEGGEQALT-TGQYIDLNRAAVDSGLVDMIDLELF-TG----------------------DDEVKA 150 (276)
T ss_dssp --CSSCEEEECCBGGGTCSBCCC-HHHHHHHHHHHHHHTCCSEEEEEGG-GC----------------------HHHHHH
T ss_pred --CCCCEEEEEEEhhhCCCCCCC-HHHHHHHHHHHHhcCCCCEEEEECc-CC----------------------HHHHHH
Confidence 12345555554 111233 334444555555688 899998431 11 345555
Q ss_pred HHHHHHcCCeeEEE
Q 025159 157 MEECQNLGYTKAIG 170 (257)
Q Consensus 157 l~~l~~~G~ir~iG 170 (257)
+.+..+++.++-|+
T Consensus 151 l~~~a~~~~~kvI~ 164 (276)
T 3o1n_A 151 TVGYAHQHNVAVIM 164 (276)
T ss_dssp HHHHHHHTTCEEEE
T ss_pred HHHHHHhCCCEEEE
Confidence 55554566676665
No 250
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=30.09 E-value=1.8e+02 Score=25.21 Aligned_cols=69 Identities=12% Similarity=-0.018 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHc-----CCe-eEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCC---cHHHHHHHHHCCceEEEec
Q 025159 151 KSVWEAMEECQNL-----GYT-KAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQ---QNKLREFCKAKDIQLAAYA 221 (257)
Q Consensus 151 ~~~~~~l~~l~~~-----G~i-r~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~---~~~~~~~~~~~gi~v~~~~ 221 (257)
.+-|+.|.+|.+. -.| -..|=+-++.+.+.++++...++ ++|+..+-+.- ...+...|+++|+.++.++
T Consensus 282 ~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~d--~v~ik~~~~GGit~a~~i~~~A~~~gi~~~~~~ 359 (413)
T 1kcz_A 282 QKQMEAMRDLRAELDGRGVDAELVADEWCNTVEDVKFFTDNKAGH--MVQIKTPDLGGVNNIADAIMYCKANGMGAYCGG 359 (413)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEECTTCCSHHHHHHHHHTTCSS--EEEECTGGGSSTHHHHHHHHHHHHTTCEEEECC
T ss_pred cccHHHHHHHHHhhhcCCCCCcEEeCCCcCCHHHHHHHHHhCCCC--EEEeCccccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 4567888888776 344 34566778899999998866555 77776654322 3678999999999999865
No 251
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=30.07 E-value=2.6e+02 Score=23.96 Aligned_cols=146 Identities=8% Similarity=0.027 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHcCCceeeCCCC--CCC------hH--HHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHH
Q 025159 41 TTKLAILEAMKLGYRHFDTATL--YQT------EQ--PLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQK 110 (257)
Q Consensus 41 ~~~~~l~~Al~~Gi~~~DtA~~--Yg~------e~--~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~ 110 (257)
.+.+..+.+.+.|++.|-.--. .+. ++ ..=+++|+.+ -+++-|...... .++++...+ +-+
T Consensus 150 ~~~~~~~~~~~~Gf~~~K~KvG~~~~~d~~~~~~~~~~~v~avReav-------G~d~~l~vDaN~-~~~~~~A~~-~~~ 220 (388)
T 3tcs_A 150 EAERLKRLRDTQGFTAFKVRAGAEVGRNRDEWPGRTEEIIPTMRREL-------GDDVDLLIDANS-CYTPDRAIE-VGH 220 (388)
T ss_dssp HHHHHHHHHHHHCCCEEEEECSCTTCTTCCSSTTHHHHHHHHHHHHH-------CSSSEEEEECTT-CCCHHHHHH-HHH
T ss_pred HHHHHHHHHHhcCCCEEEEccCCCcccccccchhHHHHHHHHHHHHh-------CCCCeEEEeCCC-CcCHHHHHH-HHH
Confidence 3444444456889998753221 110 11 2223455542 245566666543 334443332 334
Q ss_pred HHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe-eEEEecCCCHHHHHHHHHhCCCC
Q 025159 111 SLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT-KAIGVSNFSCKKLGDILATAKIP 189 (257)
Q Consensus 111 sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~ 189 (257)
.|+.+++ .++..|... +-++.+.++++.-.| -..|=+-++...+.++++...++
T Consensus 221 ~l~~~~i-----~~iEeP~~~--------------------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d 275 (388)
T 3tcs_A 221 MLQDHGF-----CHFEEPCPY--------------------WELAQTKQVTDALDIDVTGGEQDCDLPTWQRMIDMRAVD 275 (388)
T ss_dssp HHHHTTC-----CEEECCSCT--------------------TCHHHHHHHHHHCSSCEEECTTCCCHHHHHHHHHHTCCS
T ss_pred HHhhcCC-----eEEECCCCc--------------------cCHHHHHHHHHhcCCCEEcCCccCCHHHHHHHHHcCCCC
Confidence 5565554 455666321 124556677765444 35566778999999998876655
Q ss_pred CceeccccCCCC---CcHHHHHHHHHCCceEEEecC
Q 025159 190 PAANQVEMNPLW---QQNKLREFCKAKDIQLAAYAP 222 (257)
Q Consensus 190 p~~~q~~~~~~~---~~~~~~~~~~~~gi~v~~~~p 222 (257)
++|....-+. .-..+.+.|+++|+.++.++.
T Consensus 276 --~v~~d~~~~GGit~a~kia~~A~~~gv~~~~h~~ 309 (388)
T 3tcs_A 276 --IVQPDILYLGGICRTLRVVEMARAAGLPVTPHCA 309 (388)
T ss_dssp --EECCCHHHHTSHHHHHHHHHHHHHTTCCBCCCCC
T ss_pred --EEEeCccccCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 6766654322 236789999999999987764
No 252
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=29.98 E-value=1.7e+02 Score=25.13 Aligned_cols=78 Identities=9% Similarity=0.036 Sum_probs=50.4
Q ss_pred CeeEEEecCCCHHHHHHHHHhCCCC--------------CceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCCCCC
Q 025159 165 YTKAIGVSNFSCKKLGDILATAKIP--------------PAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARGTIW 230 (257)
Q Consensus 165 ~ir~iGvs~~~~~~l~~~~~~~~~~--------------p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G~l~ 230 (257)
.++-++|++-+++..+++.+..+++ ++++-+ .++-....++...|-+.|+.|+.=.|++.
T Consensus 58 ~~elvav~d~~~~~a~~~a~~~~~~~~y~d~~~ll~~~~vD~V~I-~tp~~~H~~~~~~al~aGkhVl~EKP~a~----- 131 (412)
T 4gqa_A 58 RPHLYALADQDQAMAERHAAKLGAEKAYGDWRELVNDPQVDVVDI-TSPNHLHYTMAMAAIAAGKHVYCEKPLAV----- 131 (412)
T ss_dssp EEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEE-CSCGGGHHHHHHHHHHTTCEEEEESCSCS-----
T ss_pred CeEEEEEEcCCHHHHHHHHHHcCCCeEECCHHHHhcCCCCCEEEE-CCCcHHHHHHHHHHHHcCCCeEeecCCcC-----
Confidence 4566777777777766665543321 112211 11112235788888899999999999986
Q ss_pred CCCCccChHHHHHHHHHhCCC
Q 025159 231 GSNRVMECEVLKEIAEAKGKT 251 (257)
Q Consensus 231 ~~~~~~~~~~~~~ia~~~~~s 251 (257)
+......+.+.|++.|+.
T Consensus 132 ---~~~ea~~l~~~a~~~g~~ 149 (412)
T 4gqa_A 132 ---NEQQAQEMAQAARRAGVK 149 (412)
T ss_dssp ---SHHHHHHHHHHHHHHTCC
T ss_pred ---CHHHHHHHHHHHHHhCCe
Confidence 445567788888888764
No 253
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=29.93 E-value=1.1e+02 Score=25.94 Aligned_cols=86 Identities=10% Similarity=0.054 Sum_probs=54.6
Q ss_pred HHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCC--------------CceeccccCCCCCcHHHHHHHHHCCceEEEecC
Q 025159 157 MEECQNLGYTKAIGVSNFSCKKLGDILATAKIP--------------PAANQVEMNPLWQQNKLREFCKAKDIQLAAYAP 222 (257)
Q Consensus 157 l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~--------------p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~p 222 (257)
+..+.+...++-++|++-+++..+++.+..... ++++-+ ..+-....++...|-+.|+.|+.=.|
T Consensus 22 ~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i-~tp~~~H~~~~~~al~aGkhVl~EKP 100 (359)
T 3m2t_A 22 LPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDNVPAMLNQVPLDAVVM-AGPPQLHFEMGLLAMSKGVNVFVEKP 100 (359)
T ss_dssp HHHHHTCTTEEEEEEECSSHHHHGGGGGTSCSCCEESSHHHHHHHSCCSEEEE-CSCHHHHHHHHHHHHHTTCEEEECSC
T ss_pred HHHHHhCCCcEEEEEEcCCHHHHHHHHHhcCCCcccCCHHHHhcCCCCCEEEE-cCCcHHHHHHHHHHHHCCCeEEEECC
Confidence 344555556888899998888776665543211 111110 00111125677888899999999999
Q ss_pred CCCCCCCCCCCCccChHHHHHHHHHhCCC
Q 025159 223 LGARGTIWGSNRVMECEVLKEIAEAKGKT 251 (257)
Q Consensus 223 l~~~G~l~~~~~~~~~~~~~~ia~~~~~s 251 (257)
++. .+.....+.+.|++.|+.
T Consensus 101 la~--------~~~e~~~l~~~a~~~g~~ 121 (359)
T 3m2t_A 101 PCA--------TLEELETLIDAARRSDVV 121 (359)
T ss_dssp SCS--------SHHHHHHHHHHHHHHTCC
T ss_pred CcC--------CHHHHHHHHHHHHHcCCE
Confidence 986 444567788888888864
No 254
>1y60_A Formaldehyde-activating enzyme FAE; pentamer, beta-alpha-beta LEFT handed crossover, tetrahydromethanopterin-binding, lyase; HET: H4M; 1.90A {Methylobacterium extorquens} SCOP: d.14.1.12 PDB: 1y5y_A*
Probab=29.63 E-value=61 Score=24.66 Aligned_cols=51 Identities=18% Similarity=0.375 Sum_probs=36.2
Q ss_pred CC-ChHHHHHHHHHHHhCCCCCCCC---cEEEEeccCCCC----------CChhhHHHHHHHHHHh
Q 025159 63 YQ-TEQPLGDAIAEALSTGIIKSRD---ELFIASKLWCSD----------AHRELVVPALQKSLEN 114 (257)
Q Consensus 63 Yg-~e~~lg~~l~~~~~~~~~~~R~---~l~i~tK~~~~~----------~~~~~i~~~l~~sL~~ 114 (257)
+| .+..+++++.+++++|++ +++ +++|..-+|-+. +.++..+.++++.++.
T Consensus 83 fGpaQ~avA~AVaD~V~eG~i-P~~~a~dl~Iiv~Vfi~p~a~D~~kiy~~NY~ATKlAI~RAm~~ 147 (169)
T 1y60_A 83 FGPAQHGVAMAVQDAVAEGII-PADEADDLYVLVGVFIHWEAADDAKIQKYNYEATKLSIQRAVNG 147 (169)
T ss_dssp TTHHHHHHHHHHHHHHHTTSS-CTTTGGGEEEEEEECCCTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHHHHHHcCCC-ChhhcCcEEEEEEeecCccccCHHHHHHHHHHHHHHHHHHHHhC
Confidence 34 588899999999999876 655 788888887542 2345566666666653
No 255
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=29.58 E-value=2.3e+02 Score=23.05 Aligned_cols=135 Identities=6% Similarity=0.020 Sum_probs=70.6
Q ss_pred ChhHHHHHHHHHHH-cCCceeeCC----------CCCC-ChHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHH
Q 025159 38 GSETTKLAILEAMK-LGYRHFDTA----------TLYQ-TEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVV 105 (257)
Q Consensus 38 ~~~~~~~~l~~Al~-~Gi~~~DtA----------~~Yg-~e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~ 105 (257)
+.++..++.+.+.+ .|+..++.. ..|| +.+.+-+.++...+. -++-|..|+.+...+...+
T Consensus 109 ~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~------~~~pv~vk~~~~~~~~~~~- 181 (311)
T 1ep3_A 109 EEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAV------SKVPLYVKLSPNVTDIVPI- 181 (311)
T ss_dssp SHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHH------CSSCEEEEECSCSSCSHHH-
T ss_pred CHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHh------cCCCEEEEECCChHHHHHH-
Confidence 45667777777777 898877542 2244 555666666665211 1355677775432222222
Q ss_pred HHHHHHHHhhCCCcccEEE------eecCCCCCCCCCCCCCcccCCC-CccHHHHHHHHHHHHHcCCeeEEEecCC-CHH
Q 025159 106 PALQKSLENLQLEYIDLYV------IHWPVSSKPGSYEFPIKKEDFL-PMDFKSVWEAMEECQNLGYTKAIGVSNF-SCK 177 (257)
Q Consensus 106 ~~l~~sL~~Lg~d~lDl~~------lh~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~G~ir~iGvs~~-~~~ 177 (257)
-+.++..|+|+|++.- +|.-.. .+ .. ......+. .......++.+.++++.=.+--|+.... +++
T Consensus 182 ---a~~l~~~G~d~i~v~~~~~g~~i~~~~~-~~--~~-~~~~~g~~g~~~~~~~~~~i~~i~~~~~ipvia~GGI~~~~ 254 (311)
T 1ep3_A 182 ---AKAVEAAGADGLTMINTLMGVRFDLKTR-QP--IL-ANITGGLSGPAIKPVALKLIHQVAQDVDIPIIGMGGVANAQ 254 (311)
T ss_dssp ---HHHHHHTTCSEEEECCCEEECCBCTTTC-SB--SS-TTSCEEEESGGGHHHHHHHHHHHHTTCSSCEEECSSCCSHH
T ss_pred ---HHHHHHcCCCEEEEeCCCcccccCcccC-Cc--cc-cCCCCcccCccchHHHHHHHHHHHHhcCCCEEEECCcCCHH
Confidence 2345678987776621 121000 00 00 00000000 0111234566777777656777888877 788
Q ss_pred HHHHHHHhC
Q 025159 178 KLGDILATA 186 (257)
Q Consensus 178 ~l~~~~~~~ 186 (257)
.+.+++...
T Consensus 255 d~~~~l~~G 263 (311)
T 1ep3_A 255 DVLEMYMAG 263 (311)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHcC
Confidence 888888753
No 256
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=29.17 E-value=2.5e+02 Score=23.47 Aligned_cols=98 Identities=11% Similarity=0.064 Sum_probs=53.4
Q ss_pred HHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHc-CCeeEEEecCCCHHHHHHH
Q 025159 104 VVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNL-GYTKAIGVSNFSCKKLGDI 182 (257)
Q Consensus 104 i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-G~ir~iGvs~~~~~~l~~~ 182 (257)
-+..+-+.|.++|+++|.+- +|.. . ..-|+.+.++.+. ..++..+++.-....++..
T Consensus 29 ~Kl~ia~~L~~~Gv~~IE~g---~p~~------------------~-~~d~e~v~~i~~~~~~~~i~~l~r~~~~~i~~a 86 (325)
T 3eeg_A 29 EKIIVAKALDELGVDVIEAG---FPVS------------------S-PGDFNSVVEITKAVTRPTICALTRAKEADINIA 86 (325)
T ss_dssp HHHHHHHHHHHHTCSEEEEE---CTTS------------------C-HHHHHHHHHHHHHCCSSEEEEECCSCHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEe---CCCC------------------C-HhHHHHHHHHHHhCCCCEEEEeecCCHHHHHHH
Confidence 34556666889999988885 3421 1 1234555555553 3456667665566667766
Q ss_pred HHh---CCCCCc---------eeccccCCCCC-----cHHHHHHHHHCCceEEEecCC
Q 025159 183 LAT---AKIPPA---------ANQVEMNPLWQ-----QNKLREFCKAKDIQLAAYAPL 223 (257)
Q Consensus 183 ~~~---~~~~p~---------~~q~~~~~~~~-----~~~~~~~~~~~gi~v~~~~pl 223 (257)
++. ++++-. .++.+++.-.. -.+.+++|+++|+.+.-.-|.
T Consensus 87 ~~al~~ag~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~d 144 (325)
T 3eeg_A 87 GEALRFAKRSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCED 144 (325)
T ss_dssp HHHHTTCSSEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEET
T ss_pred HHhhcccCCCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEccc
Confidence 554 222211 11111111111 157899999999987644443
No 257
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=29.17 E-value=2.9e+02 Score=24.13 Aligned_cols=122 Identities=11% Similarity=0.067 Sum_probs=74.3
Q ss_pred HHHHHHHHHhCCCCCCCCcEEEEeccCCC-------------CCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCC
Q 025159 69 LGDAIAEALSTGIIKSRDELFIASKLWCS-------------DAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGS 135 (257)
Q Consensus 69 lg~~l~~~~~~~~~~~R~~l~i~tK~~~~-------------~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~ 135 (257)
+-+++++. |. .+++.|..-+... ..+++...+-+++.++. .++++|..|-+..
T Consensus 224 i~~Air~a---Gy---~~dv~l~vD~~ase~~~~g~y~l~~~~~t~~eai~~~~~ll~~-----y~i~~IEdPl~~d--- 289 (417)
T 3qn3_A 224 LMTCIKKA---GY---ENRVKIALDVASTEFFKDGKYHMEGKAFSSEALIERYVELCAK-----YPICSIEDGLAEN--- 289 (417)
T ss_dssp HHHHHHHT---TC---TTTEEEEEECCGGGGEETTEEEETTEEECHHHHHHHHHHHHHH-----SCEEEEESSSCTT---
T ss_pred HHHHHHHc---CC---CCCceEEEECCchhhccCCeeecCCCccCHHHHHHHHHHHHhh-----cceeEEecCCCcc---
Confidence 34566665 53 4588877766432 12455555555555664 3588899885422
Q ss_pred CCCCCcccCCCCccHHHHHHHHHHHHHc-C-CeeEEE-ecCCC-HHHHHHHHHhCCCCCceeccccCCCCC---cHHHHH
Q 025159 136 YEFPIKKEDFLPMDFKSVWEAMEECQNL-G-YTKAIG-VSNFS-CKKLGDILATAKIPPAANQVEMNPLWQ---QNKLRE 208 (257)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~-G-~ir~iG-vs~~~-~~~l~~~~~~~~~~p~~~q~~~~~~~~---~~~~~~ 208 (257)
-|+.+.+|.+. | +|.-+| =+.++ ++.+.++++....+ ++|+..+-..- -..+.+
T Consensus 290 -----------------D~e~~~~L~~~~g~~ipI~gDE~~~tn~~~~~~~i~~~a~d--~i~iKv~qiGGiTea~kia~ 350 (417)
T 3qn3_A 290 -----------------DFEGWIKLTEKLGNKIQLVGDDLFVTNEDILREGIIKKMAN--AVLIKPNQIGTITQTMRTVR 350 (417)
T ss_dssp -----------------CHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCS--EEEECHHHHCSHHHHHHHHH
T ss_pred -----------------cHHHHHHHHHhhCCCCceecCCcccCCHHHHHHHHHhCCCC--EEEecCCCCCCHHHHHHHHH
Confidence 24445555543 3 465444 23444 89999998876655 66665543322 367899
Q ss_pred HHHHCCceEEEecCC
Q 025159 209 FCKAKDIQLAAYAPL 223 (257)
Q Consensus 209 ~~~~~gi~v~~~~pl 223 (257)
.|+++|+.++..+..
T Consensus 351 lA~~~G~~v~vsh~s 365 (417)
T 3qn3_A 351 LAQRNNYKCVMSHRS 365 (417)
T ss_dssp HHHHTTCEEEEECCS
T ss_pred HHHHcCCeEEEeCCC
Confidence 999999998765544
No 258
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=28.41 E-value=26 Score=29.72 Aligned_cols=39 Identities=13% Similarity=0.115 Sum_probs=31.5
Q ss_pred HHHHHHHHHCCceEEEecCCCCCCCCCCCCCccChHHHHHHHHH----hCCCcccc
Q 025159 204 NKLREFCKAKDIQLAAYAPLGARGTIWGSNRVMECEVLKEIAEA----KGKTVAQV 255 (257)
Q Consensus 204 ~~~~~~~~~~gi~v~~~~pl~~~G~l~~~~~~~~~~~~~~ia~~----~~~s~~qv 255 (257)
.++++..+++|+.+..-|.=. ...++.+|.. ||+++.+|
T Consensus 149 ~~l~~~l~~~G~~v~ivSas~-------------~~~v~~~a~~~~~~ygIp~e~V 191 (327)
T 4as2_A 149 RELYNKLMENGIEVYVISAAH-------------EELVRMVAADPRYGYNAKPENV 191 (327)
T ss_dssp HHHHHHHHHTTCEEEEEEEEE-------------HHHHHHHHTCGGGSCCCCGGGE
T ss_pred HHHHHHHHHCCCEEEEEeCCc-------------HHHHHHHHhhcccccCCCHHHe
Confidence 789999999999998765432 3778888887 78998886
No 259
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=28.06 E-value=1.8e+02 Score=22.63 Aligned_cols=65 Identities=15% Similarity=0.077 Sum_probs=39.4
Q ss_pred HHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEEec-CCCHHHHHHHHHhCCCCC
Q 025159 112 LENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGVS-NFSCKKLGDILATAKIPP 190 (257)
Q Consensus 112 L~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs-~~~~~~l~~~~~~~~~~p 190 (257)
...+|.||+=+++. |.. .+ ..+. +..+.+.... ...+..+||. |.+++.+.++.+..+.+
T Consensus 18 a~~~GaD~iGfif~--~~S-pR-------------~V~~-~~a~~i~~~~-~~~~~~VgVfvn~~~~~i~~~~~~~~ld- 78 (205)
T 1nsj_A 18 SVESGADAVGFVFY--PKS-KR-------------YISP-EDARRISVEL-PPFVFRVGVFVNEEPEKILDVASYVQLN- 78 (205)
T ss_dssp HHHHTCSEEEEECC--TTC-TT-------------BCCH-HHHHHHHHHS-CSSSEEEEEESSCCHHHHHHHHHHHTCS-
T ss_pred HHHcCCCEEEEEec--CCC-CC-------------cCCH-HHHHHHHHhC-CCCCCEEEEEeCCCHHHHHHHHHhhCCC-
Confidence 34689999888742 311 11 1223 3333343322 2468889985 67888888888876554
Q ss_pred ceeccc
Q 025159 191 AANQVE 196 (257)
Q Consensus 191 ~~~q~~ 196 (257)
++|+.
T Consensus 79 -~vQLH 83 (205)
T 1nsj_A 79 -AVQLH 83 (205)
T ss_dssp -EEEEC
T ss_pred -EEEEC
Confidence 88875
No 260
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=27.71 E-value=76 Score=26.40 Aligned_cols=84 Identities=12% Similarity=0.039 Sum_probs=49.0
Q ss_pred HHHHcCCeeEEEecCCCHHHHHHHHHhCCCC--------------CceeccccCCCCCcHHHHHHHHHCCceEEEecCCC
Q 025159 159 ECQNLGYTKAIGVSNFSCKKLGDILATAKIP--------------PAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLG 224 (257)
Q Consensus 159 ~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~--------------p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~ 224 (257)
.+.+.+.++-++|++-+++..+++.+..+++ ++++=+ ..+-....++...|-++|+.|+.=.|++
T Consensus 23 ~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i-~tp~~~h~~~~~~al~aGk~Vl~EKP~a 101 (329)
T 3evn_A 23 GVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYV-ATINQDHYKVAKAALLAGKHVLVEKPFT 101 (329)
T ss_dssp HHHHHCSEEEEEEECSCSSTTCC---CCCCSCEESCHHHHHTCTTCCEEEE-CSCGGGHHHHHHHHHHTTCEEEEESSCC
T ss_pred HHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEE-CCCcHHHHHHHHHHHHCCCeEEEccCCc
Confidence 3445567777888877655544443332221 111110 1111122567788889999999999998
Q ss_pred CCCCCCCCCCccChHHHHHHHHHhCCC
Q 025159 225 ARGTIWGSNRVMECEVLKEIAEAKGKT 251 (257)
Q Consensus 225 ~~G~l~~~~~~~~~~~~~~ia~~~~~s 251 (257)
. +......+.+.|++.|+.
T Consensus 102 ~--------~~~e~~~l~~~a~~~~~~ 120 (329)
T 3evn_A 102 L--------TYDQANELFALAESCNLF 120 (329)
T ss_dssp S--------SHHHHHHHHHHHHHTTCC
T ss_pred C--------CHHHHHHHHHHHHHcCCE
Confidence 6 344556777788887764
No 261
>3ec1_A YQEH GTPase; atnos1, atnoa1, trap, PVHL, hydrolase, signaling protein; HET: GDP; 2.36A {Geobacillus stearothermophilus}
Probab=27.57 E-value=2.8e+02 Score=23.47 Aligned_cols=121 Identities=11% Similarity=0.088 Sum_probs=73.4
Q ss_pred CChhHHHHHHHHHHHcC---CceeeCCCCCCChHHHHHHHHHHHhCCCCCCCCcEEEEecc--CCCCCChhhHHHHHHHH
Q 025159 37 SGSETTKLAILEAMKLG---YRHFDTATLYQTEQPLGDAIAEALSTGIIKSRDELFIASKL--WCSDAHRELVVPALQKS 111 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~G---i~~~DtA~~Yg~e~~lg~~l~~~~~~~~~~~R~~l~i~tK~--~~~~~~~~~i~~~l~~s 111 (257)
.+.+...+++....+.= +-.+|.++..++ .-..+.+.+ + .+.-++|.+|+ .+.....+.+.+.+++.
T Consensus 56 ~~~e~f~~~L~~~~~~~~lil~VvD~~d~~~s---~~~~l~~~l--~---~~piilV~NK~DLl~~~~~~~~~~~~l~~~ 127 (369)
T 3ec1_A 56 LDDDDFLSMLHRIGESKALVVNIVDIFDFNGS---FIPGLPRFA--A---DNPILLVGNKADLLPRSVKYPKLLRWMRRM 127 (369)
T ss_dssp ---CHHHHHHHHHHHHCCEEEEEEETTCSGGG---CCSSHHHHC--T---TSCEEEEEECGGGSCTTCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhhccCcEEEEEEECCCCCCc---hhhHHHHHh--C---CCCEEEEEEChhcCCCccCHHHHHHHHHHH
Confidence 34455667777665432 246787765431 000112221 1 35678899997 23333345667777777
Q ss_pred HHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEEecCCCHHHHHHH
Q 025159 112 LENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGVSNFSCKKLGDI 182 (257)
Q Consensus 112 L~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~ 182 (257)
++.+|....+++.+-.-. ....+++.+.+.++.+...|--+|-+|.....+-..
T Consensus 128 ~~~~g~~~~~v~~iSA~~-----------------g~gi~~L~~~I~~~~~~~~i~~vG~~nvGKStliN~ 181 (369)
T 3ec1_A 128 AEELGLCPVDVCLVSAAK-----------------GIGMAKVMEAINRYREGGDVYVVGCTNVGKSTFINR 181 (369)
T ss_dssp HHTTTCCCSEEEECBTTT-----------------TBTHHHHHHHHHHHHTTSCEEEECCTTSSHHHHHHH
T ss_pred HHHcCCCcccEEEEECCC-----------------CCCHHHHHHHHHhhcccCcEEEEcCCCCchHHHHHH
Confidence 888886545666654322 134788899998888888899999999986664333
No 262
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=27.17 E-value=2.7e+02 Score=23.14 Aligned_cols=146 Identities=12% Similarity=0.061 Sum_probs=76.0
Q ss_pred HHHHHHHHHcCCceeeCCCCCC-C--hHHH--HHHHH-HHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHhhC
Q 025159 43 KLAILEAMKLGYRHFDTATLYQ-T--EQPL--GDAIA-EALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLENLQ 116 (257)
Q Consensus 43 ~~~l~~Al~~Gi~~~DtA~~Yg-~--e~~l--g~~l~-~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~Lg 116 (257)
.+.++.....+..+++.+..-| + +..+ ...++ +. ++ .-=..++. .+.++..++..+... ..+|
T Consensus 42 ~~~~~~l~~l~p~fvsVT~gagg~~r~~t~~~a~~i~~~~---g~---~~v~Hltc----~~~~~~~l~~~L~~~-~~~G 110 (304)
T 3fst_A 42 WNSIDRLSSLKPKFVSVTYGANSGERDRTHSIIKGIKDRT---GL---EAAPHLTC----IDATPDELRTIARDY-WNNG 110 (304)
T ss_dssp HHHHHHHHTTCCSEEEECCCTTSSCHHHHHHHHHHHHHHH---CC---CEEEEEES----TTSCHHHHHHHHHHH-HHTT
T ss_pred HHHHHHHhcCCCCEEEEeeCCCCcchhHHHHHHHHHHHHh---CC---CeeEEeec----CCCCHHHHHHHHHHH-HHCC
Confidence 3456666677889998886544 2 3322 22233 23 43 12223333 345677777777766 5789
Q ss_pred CCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEEecCCC--------H-HHHHHHHHh--
Q 025159 117 LEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGVSNFS--------C-KKLGDILAT-- 185 (257)
Q Consensus 117 ~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~--------~-~~l~~~~~~-- 185 (257)
++ .++.|.. |....++ .....-.++.+.+ ++.+. -.||+..|. . ..+..+.+.
T Consensus 111 I~--nILaLrG-Dpp~~~~---------~~~~~A~dLv~~i---r~~~~-f~IgvA~yPE~Hp~a~~~~~d~~~Lk~Kvd 174 (304)
T 3fst_A 111 IR--HIVALRG-DLPPGSG---------KPEMYASDLVTLL---KEVAD-FDISVAAYPEVHPEAKSAQADLLNLKRKVD 174 (304)
T ss_dssp CC--EEEEECC-CCC---------------CCCHHHHHHHH---HHHCC-CEEEEEECTTCCTTCSCHHHHHHHHHHHHH
T ss_pred CC--EEEEecC-CCCCCCC---------CCCCCHHHHHHHH---HHcCC-CeEEEEeCCCcCCCCCCHHHHHHHHHHHHH
Confidence 76 4566643 1111100 0012233444433 33343 368988662 2 234444333
Q ss_pred CCCCCceeccccCCCCCcHHHHHHHHHCCce
Q 025159 186 AKIPPAANQVEMNPLWQQNKLREFCKAKDIQ 216 (257)
Q Consensus 186 ~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~ 216 (257)
++-+..+-|.-|+.- .-.+.++.|++.||.
T Consensus 175 AGAdf~iTQ~ffD~~-~~~~f~~~~r~~Gi~ 204 (304)
T 3fst_A 175 AGANRAITQFFFDVE-SYLRFRDRCVSAGID 204 (304)
T ss_dssp HTCCEEEECCCSCHH-HHHHHHHHHHHTTCC
T ss_pred cCCCEEEeCccCCHH-HHHHHHHHHHhcCCC
Confidence 345667778776531 114688899999864
No 263
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=27.00 E-value=3.1e+02 Score=23.73 Aligned_cols=37 Identities=11% Similarity=-0.052 Sum_probs=29.3
Q ss_pred HHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCC
Q 025159 153 VWEAMEECQNLGYTKAIGVSNFSCKKLGDILATAKIP 189 (257)
Q Consensus 153 ~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~ 189 (257)
.|+....+++.=.+--|++..++++..+++++....+
T Consensus 307 ~~~~~~~vk~~~~iPvi~~G~i~~~~a~~~l~~g~aD 343 (402)
T 2hsa_B 307 EARLMRTLRNAYQGTFICSGGYTRELGIEAVAQGDAD 343 (402)
T ss_dssp HHHHHHHHHHHCSSCEEEESSCCHHHHHHHHHTTSCS
T ss_pred hHHHHHHHHHHCCCCEEEeCCCCHHHHHHHHHCCCCc
Confidence 4666777777666777899999999999999976655
No 264
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=26.88 E-value=1.6e+02 Score=25.42 Aligned_cols=153 Identities=15% Similarity=0.163 Sum_probs=80.7
Q ss_pred CChhHHHHHHHHHHHcCCceeeCCCCCC---Ch---HHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHH
Q 025159 37 SGSETTKLAILEAMKLGYRHFDTATLYQ---TE---QPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQK 110 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg---~e---~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~ 110 (257)
...++..+.++.|-+.|++.+-|+-... .+ ..+.+.++.+ +.-.+-|..-+ +| .
T Consensus 14 ~~~~~~~~yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a-------~~~g~~vi~DI-----sp--------~ 73 (372)
T 2p0o_A 14 EITNDTIIYIKKMKALGFDGIFTSLHIPEDDTSLYRQRLTDLGAIA-------KAEKMKIMVDI-----SG--------E 73 (372)
T ss_dssp CCCHHHHHHHHHHHHTTCCEEEEEECCC-----CHHHHHHHHHHHH-------HHHTCEEEEEE-----CH--------H
T ss_pred CCHHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHH-------HHCCCEEEEEC-----CH--------H
Confidence 3556777999999999999888876642 11 2222222222 12233343333 23 3
Q ss_pred HHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHhCC-CC
Q 025159 111 SLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGVSNFSCKKLGDILATAK-IP 189 (257)
Q Consensus 111 sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~-~~ 189 (257)
+|+.||.+|=|+=.+|....+.- +-+. ..+.++ ...|-.. .--.+=.|+.+.+.++.+++... ..
T Consensus 74 ~l~~Lg~s~~dl~~~~~lGi~gl--------RLD~-Gf~~~e----ia~ls~n-lkIeLNASti~~~~l~~l~~~~~n~~ 139 (372)
T 2p0o_A 74 ALKRAGFSFDELEPLIELGVTGL--------RMDY-GITIEQ----MAHASHK-IDIGLNASTITLEEVAELKAHQADFS 139 (372)
T ss_dssp HHHTTTCBTTBCHHHHHHTCCEE--------EECS-SCCHHH----HHHHHTT-SEEEEETTTCCHHHHHHHHHTTCCGG
T ss_pred HHHHcCCCHHHHHHHHHcCCCEE--------EEcC-CCCHHH----HHHHhcC-CEEEEECccCCHHHHHHHHHcCCChH
Confidence 45556666555544443211100 0000 011222 2233333 33356778889999999988653 11
Q ss_pred CceeccccCCCCC-----c--HHHHHHHHHCCceEEEecCC
Q 025159 190 PAANQVEMNPLWQ-----Q--NKLREFCKAKDIQLAAYAPL 223 (257)
Q Consensus 190 p~~~q~~~~~~~~-----~--~~~~~~~~~~gi~v~~~~pl 223 (257)
-...-.+|.|... + ...-++.+++||.+.|+-|=
T Consensus 140 ~l~a~HNFYPr~~TGLs~~~f~~~n~~~k~~Gi~t~AFI~g 180 (372)
T 2p0o_A 140 RLEAWHNYYPRPETGIGTTFFNEKNRWLKELGLQVFTFVPG 180 (372)
T ss_dssp GEEEECCCCCSTTCSBCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HeEEeeccCCCCCCCCCHHHHHHHHHHHHHCCCcEEEEecC
Confidence 1222234443221 1 46678888999999988654
No 265
>2eq9_C Pyruvate dehydrogenase complex, dihydrolipoamide acetyltransferase E2 component; protein-protein complex, oxidoreductase; HET: FAD; 2.09A {Thermus thermophilus}
Probab=26.76 E-value=48 Score=18.37 Aligned_cols=19 Identities=16% Similarity=0.288 Sum_probs=15.7
Q ss_pred hHHHHHHHHHhCCCccccc
Q 025159 238 CEVLKEIAEAKGKTVAQVL 256 (257)
Q Consensus 238 ~~~~~~ia~~~~~s~~qva 256 (257)
.+....+|+++|+++.+|.
T Consensus 4 sP~ar~la~e~gidl~~v~ 22 (41)
T 2eq9_C 4 VPAARKLARELGIPIEEVP 22 (41)
T ss_dssp CHHHHHHHHHTTCCGGGSC
T ss_pred ChHHHHHHHHcCCChhhcC
Confidence 4778899999999888763
No 266
>2eq7_C 2-oxoglutarate dehydrogenase E2 component; protein-protein complex, oxidoreductase; HET: FAD NAD; 1.80A {Thermus thermophilus}
Probab=26.61 E-value=51 Score=18.13 Aligned_cols=19 Identities=21% Similarity=0.293 Sum_probs=15.5
Q ss_pred hHHHHHHHHHhCCCccccc
Q 025159 238 CEVLKEIAEAKGKTVAQVL 256 (257)
Q Consensus 238 ~~~~~~ia~~~~~s~~qva 256 (257)
.+..+++|+++|+++.+|.
T Consensus 3 sP~ar~la~e~gidl~~v~ 21 (40)
T 2eq7_C 3 MPAAERLMQEKGVSPAEVQ 21 (40)
T ss_dssp CHHHHHHHHHTTCCTTTSC
T ss_pred CcHHHHHHHHhCCChhhcC
Confidence 4778889999999888763
No 267
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=26.48 E-value=2.2e+02 Score=23.99 Aligned_cols=82 Identities=12% Similarity=0.075 Sum_probs=50.7
Q ss_pred HHHHcCCeeEEEecCCCHHHHHHH-------------HHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCC
Q 025159 159 ECQNLGYTKAIGVSNFSCKKLGDI-------------LATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGA 225 (257)
Q Consensus 159 ~l~~~G~ir~iGvs~~~~~~l~~~-------------~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~ 225 (257)
.+.+...++-++|++-+++.+.+. ++...++ ++-+ ..+-....++...|-+.|+.|+.-+|++.
T Consensus 26 ~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~~D--~V~i-~tp~~~H~~~~~~al~aGk~Vl~EKPla~ 102 (364)
T 3e82_A 26 LIRSVPGLNLAFVASRDEEKVKRDLPDVTVIASPEAAVQHPDVD--LVVI-ASPNATHAPLARLALNAGKHVVVDKPFTL 102 (364)
T ss_dssp HHHTSTTEEEEEEECSCHHHHHHHCTTSEEESCHHHHHTCTTCS--EEEE-CSCGGGHHHHHHHHHHTTCEEEECSCSCS
T ss_pred HHhhCCCeEEEEEEcCCHHHHHhhCCCCcEECCHHHHhcCCCCC--EEEE-eCChHHHHHHHHHHHHCCCcEEEeCCCcC
Confidence 345555677889998888765432 1111122 2211 11212235778888899999999999986
Q ss_pred CCCCCCCCCccChHHHHHHHHHhCCC
Q 025159 226 RGTIWGSNRVMECEVLKEIAEAKGKT 251 (257)
Q Consensus 226 ~G~l~~~~~~~~~~~~~~ia~~~~~s 251 (257)
.......+.+.|++.|+.
T Consensus 103 --------~~~e~~~l~~~a~~~g~~ 120 (364)
T 3e82_A 103 --------DMQEARELIALAEEKQRL 120 (364)
T ss_dssp --------SHHHHHHHHHHHHHTTCC
T ss_pred --------CHHHHHHHHHHHHHhCCe
Confidence 344556777788887753
No 268
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=26.37 E-value=2.8e+02 Score=23.02 Aligned_cols=106 Identities=12% Similarity=0.109 Sum_probs=61.2
Q ss_pred CCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHH--cCCee-EEEecCC
Q 025159 98 DAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQN--LGYTK-AIGVSNF 174 (257)
Q Consensus 98 ~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~--~G~ir-~iGvs~~ 174 (257)
..+.+.+++.++..++. | +|-+++-.-.-+ ...++.+|-.+.++..++ .|++. -+|++.
T Consensus 29 ~iD~~~l~~lv~~li~~-G---v~gl~v~GtTGE-------------~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~- 90 (314)
T 3d0c_A 29 EIDWKGLDDNVEFLLQN-G---IEVIVPNGNTGE-------------FYALTIEEAKQVATRVTELVNGRATVVAGIGY- 90 (314)
T ss_dssp CBCHHHHHHHHHHHHHT-T---CSEECTTSGGGT-------------GGGSCHHHHHHHHHHHHHHHTTSSEEEEEECS-
T ss_pred CCCHHHHHHHHHHHHHc-C---CCEEEECcccCC-------------hhhCCHHHHHHHHHHHHHHhCCCCeEEecCCc-
Confidence 45778888888888773 6 466665432211 113445555555555554 46653 359999
Q ss_pred CHHHHHHHHH---hCCCCCceeccccCCCCCcHHHHH----HHHHCCceEEEec
Q 025159 175 SCKKLGDILA---TAKIPPAANQVEMNPLWQQNKLRE----FCKAKDIQLAAYA 221 (257)
Q Consensus 175 ~~~~l~~~~~---~~~~~p~~~q~~~~~~~~~~~~~~----~~~~~gi~v~~~~ 221 (257)
+..+..++.+ ..+.+-.++-.+|..--.+.++++ .++.-+++++.|+
T Consensus 91 st~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn 144 (314)
T 3d0c_A 91 SVDTAIELGKSAIDSGADCVMIHQPVHPYITDAGAVEYYRNIIEALDAPSIIYF 144 (314)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHHSSSCEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 8666544433 344554444445433223455554 4556789999999
No 269
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=26.34 E-value=3.8e+02 Score=24.61 Aligned_cols=130 Identities=9% Similarity=0.017 Sum_probs=63.4
Q ss_pred HHHHHHHHHHcCCceeeCC-------------------CCCC-C----hHHHHHHHHHHHhCCCCCCCCcEEEEeccCCC
Q 025159 42 TKLAILEAMKLGYRHFDTA-------------------TLYQ-T----EQPLGDAIAEALSTGIIKSRDELFIASKLWCS 97 (257)
Q Consensus 42 ~~~~l~~Al~~Gi~~~DtA-------------------~~Yg-~----e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~ 97 (257)
..+.-+.|.++|+..++.- +.|| + -+++-+.++...+. --+++.|..|+.+.
T Consensus 143 ~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~----vG~~~~v~vrls~~ 218 (671)
T 1ps9_A 143 FARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRER----VGNDFIIIYRLSML 218 (671)
T ss_dssp HHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHH----HCSSSEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHH----cCCCceEEEEECcc
Confidence 3445556678999988762 2355 2 12233333322111 12466777777432
Q ss_pred -----CCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEEec
Q 025159 98 -----DAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGVS 172 (257)
Q Consensus 98 -----~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs 172 (257)
..+.+.. ..+-+.|+..|+||+++ |.-..... .|...... .....++.+.++++.=.+--|++.
T Consensus 219 ~~~~~g~~~~~~-~~~a~~l~~~g~d~i~v---~~~~~~~~----~~~~~~~~---~~~~~~~~~~~i~~~~~iPvi~~G 287 (671)
T 1ps9_A 219 DLVEDGGTFAET-VELAQAIEAAGATIINT---GIGWHEAR----IPTIATPV---PRGAFSWVTRKLKGHVSLPLVTTN 287 (671)
T ss_dssp CCSTTCCCHHHH-HHHHHHHHHHTCSEEEE---EECBTTCS----SCSSSTTS---CTTTTHHHHHHHTTSCSSCEEECS
T ss_pred ccCCCCCCHHHH-HHHHHHHHhcCCCEEEc---CCCccccc----cccccccC---CcchHHHHHHHHHHhcCceEEEeC
Confidence 2344433 23446678889887765 42110000 00000000 000123445556665555566666
Q ss_pred CC-CHHHHHHHHHhC
Q 025159 173 NF-SCKKLGDILATA 186 (257)
Q Consensus 173 ~~-~~~~l~~~~~~~ 186 (257)
.+ +++..+++++..
T Consensus 288 gi~~~~~a~~~l~~g 302 (671)
T 1ps9_A 288 RINDPQVADDILSRG 302 (671)
T ss_dssp SCCSHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHcC
Confidence 65 677777776654
No 270
>3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, ST genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406}
Probab=26.20 E-value=1.7e+02 Score=23.43 Aligned_cols=21 Identities=29% Similarity=0.309 Sum_probs=17.4
Q ss_pred ChhHHHHHHHHHHHcCCceee
Q 025159 38 GSETTKLAILEAMKLGYRHFD 58 (257)
Q Consensus 38 ~~~~~~~~l~~Al~~Gi~~~D 58 (257)
-+|.....++.|++.|+..++
T Consensus 21 ~PENTl~Af~~A~~~Gad~iE 41 (272)
T 3ch0_A 21 LPENTIAAFTKALLLGVTTLE 41 (272)
T ss_dssp SSTTSHHHHHHHHHHTCSEEE
T ss_pred CCcccHHHHHHHHHcCCCEEE
Confidence 457788999999999998774
No 271
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=26.17 E-value=1.8e+02 Score=24.44 Aligned_cols=147 Identities=14% Similarity=0.106 Sum_probs=79.9
Q ss_pred ChhHHHHHHHHHHHc-CCceeeCCCCCC---ChHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHH
Q 025159 38 GSETTKLAILEAMKL-GYRHFDTATLYQ---TEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLE 113 (257)
Q Consensus 38 ~~~~~~~~l~~Al~~-Gi~~~DtA~~Yg---~e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~ 113 (257)
...++.+.+..+++. |.........|| ....+.+++.+++ + .+..++.+- . . .++...++
T Consensus 74 ~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~--g----~~~~i~~~s-----G-t----~a~~~~l~ 137 (409)
T 3kki_A 74 NHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFT--G----FDECLLSQS-----G-W----NANVGLLQ 137 (409)
T ss_dssp TCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHH--T----CSEEEEESC-----H-H----HHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHh--C----CCeEEEecc-----h-H----HHHHHHHH
Confidence 456777777777765 221111112233 1334566666653 3 233333311 1 1 33333344
Q ss_pred hhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCCCcee
Q 025159 114 NLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAAN 193 (257)
Q Consensus 114 ~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~ 193 (257)
.+ ++.=|.+++..|.. ...+..+. ..| .+.+.+...+.+.++++++..+.+..+.
T Consensus 138 ~~-~~~gd~Vl~~~~~~--------------------~~~~~~~~---~~g-~~~~~~~~~d~~~le~~l~~~~~~~vi~ 192 (409)
T 3kki_A 138 TI-CQPNTNVYIDFFAH--------------------MSLWEGAR---YAN-AQAHPFMHNNCDHLRMLIQRHGPGIIVV 192 (409)
T ss_dssp HH-CCTTCEEEEETTSC--------------------HHHHHHHH---HTT-CEEEEECTTCHHHHHHHHHHHCSCEEEE
T ss_pred Hh-cCCCCEEEECCCcC--------------------HHHHHHHH---HcC-CeEEEecCCCHHHHHHHHHhcCCeEEEE
Confidence 33 23447888877632 23333332 223 3345555678899998887644454455
Q ss_pred ccccCCCCC---cHHHHHHHHHCCceEEEecCCCC
Q 025159 194 QVEMNPLWQ---QNKLREFCKAKDIQLAAYAPLGA 225 (257)
Q Consensus 194 q~~~~~~~~---~~~~~~~~~~~gi~v~~~~pl~~ 225 (257)
..+.|+... -.++.++|+++|+-++.=.+.+.
T Consensus 193 ~~~~nptG~~~~l~~l~~la~~~~~~li~De~~~~ 227 (409)
T 3kki_A 193 DSIYSTLGTIAPLAELVNISKEFGCALLVDESHSL 227 (409)
T ss_dssp ESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTT
T ss_pred CCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccc
Confidence 555554322 37899999999999998777654
No 272
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=25.77 E-value=2e+02 Score=23.32 Aligned_cols=78 Identities=13% Similarity=0.131 Sum_probs=55.7
Q ss_pred hHHHHHHHHHHHcCCceeeCCCCCC--ChHHHHHHHHHHHhCCCCCCCCcEEEEeccCC------CCCChhhHHHHHHHH
Q 025159 40 ETTKLAILEAMKLGYRHFDTATLYQ--TEQPLGDAIAEALSTGIIKSRDELFIASKLWC------SDAHRELVVPALQKS 111 (257)
Q Consensus 40 ~~~~~~l~~Al~~Gi~~~DtA~~Yg--~e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~------~~~~~~~i~~~l~~s 111 (257)
....+.++.+-+.|+++++.+...- ++...-+.++.. .+..+.+.+-++. ...+++.+.+.+++-
T Consensus 85 g~~~~yl~~~k~lGf~~iEiS~G~i~l~~~~~~~~I~~~-------~~~G~~v~~EvG~k~~~~~~~~~~~~~I~~~~~~ 157 (251)
T 1qwg_A 85 GKFDEFLNECEKLGFEAVEISDGSSDISLEERNNAIKRA-------KDNGFMVLTEVGKKMPDKDKQLTIDDRIKLINFD 157 (251)
T ss_dssp TCHHHHHHHHHHHTCCEEEECCSSSCCCHHHHHHHHHHH-------HHTTCEEEEEECCSSHHHHTTCCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHH-------HHCCCEEeeeccccCCcccCCCCHHHHHHHHHHH
Confidence 3567888888889999999888765 677777777776 3444566555543 234778888888888
Q ss_pred HHhhCCCcccEEEeecC
Q 025159 112 LENLQLEYIDLYVIHWP 128 (257)
Q Consensus 112 L~~Lg~d~lDl~~lh~p 128 (257)
|+. | .|.+++..-
T Consensus 158 LeA-G---A~~ViiEar 170 (251)
T 1qwg_A 158 LDA-G---ADYVIIEGR 170 (251)
T ss_dssp HHH-T---CSEEEECCT
T ss_pred HHC-C---CcEEEEeee
Confidence 885 6 477888764
No 273
>3rfa_A Ribosomal RNA large subunit methyltransferase N; radical SAM, S-adenosylmethionine, iron sulfur cluster, oxidoreductase; HET: SAM; 2.05A {Escherichia coli} PDB: 3rf9_A*
Probab=25.54 E-value=3.3e+02 Score=23.64 Aligned_cols=171 Identities=13% Similarity=0.109 Sum_probs=92.8
Q ss_pred CChhHHHHHHHHHHH-c---------CCceeeCCCCCC----ChHHHHHHHHHHHhC-CCCCCCCcEEEEeccCCCCCCh
Q 025159 37 SGSETTKLAILEAMK-L---------GYRHFDTATLYQ----TEQPLGDAIAEALST-GIIKSRDELFIASKLWCSDAHR 101 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~-~---------Gi~~~DtA~~Yg----~e~~lg~~l~~~~~~-~~~~~R~~l~i~tK~~~~~~~~ 101 (257)
.+.++..+.+..+.. . +++.+=.. .+| +...+-++++.+-+. |+--....+.|+|-.. .
T Consensus 143 Lt~eEIv~qv~~~~~~~~~~g~~gg~~i~~Ivf~-GgGEPLln~d~v~~~i~~lk~~~Gl~~s~r~itlsTnG~-----~ 216 (404)
T 3rfa_A 143 LRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMM-GMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGV-----V 216 (404)
T ss_dssp CCHHHHHHHHHHHHHHHCCHHHHSSCSCSEEEEC-SSSCGGGCHHHHHHHHHHHHSTTTTCCCGGGEEEEESCC-----H
T ss_pred CCHHHHHHHHHHHHHHhhhcccccCCCccEEEEe-CCCCcccCHHHHHHHHHHHHhhcCcCcCCCceEEECCCc-----H
Confidence 567777666655543 1 23333211 133 556777788776321 2100122577777432 1
Q ss_pred hhHHHHHHHHHHhhCCCcccE-EEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHH-HcCC------eeEEEec-
Q 025159 102 ELVVPALQKSLENLQLEYIDL-YVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQ-NLGY------TKAIGVS- 172 (257)
Q Consensus 102 ~~i~~~l~~sL~~Lg~d~lDl-~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~G~------ir~iGvs- 172 (257)
..+++.++.+ + +-+ +-||.+++....... |.. ....++++++++.++. +.|. ++++=+-
T Consensus 217 ----p~i~~L~~~~--d-~~LaiSLka~d~e~~~~i~-pv~----~~~~le~vl~ai~~~~~~~g~~~~~V~ie~vLI~G 284 (404)
T 3rfa_A 217 ----PALDKLGDMI--D-VALAISLHAPNDEIRDEIV-PIN----KKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDH 284 (404)
T ss_dssp ----HHHHHHHHHC--C-CEEEEECCCSSHHHHHHHS-GGG----GTSCHHHHHHHHHHHHHHCTTTTTCEEEEEEEBTT
T ss_pred ----HHHHHHHHhh--c-ceEEecccCCCHHHHHHhc-CCc----cCCCHHHHHHHHHHHHHHhCCCcccEEEEEEEecC
Confidence 2344444432 1 123 557877542110000 000 0234788899996554 4554 4555554
Q ss_pred -CCCHHHHHHHHHhCC-CCCceeccccCCCCC------c----HHHHHHHHHCCceEEEecCCCC
Q 025159 173 -NFSCKKLGDILATAK-IPPAANQVEMNPLWQ------Q----NKLREFCKAKDIQLAAYAPLGA 225 (257)
Q Consensus 173 -~~~~~~l~~~~~~~~-~~p~~~q~~~~~~~~------~----~~~~~~~~~~gi~v~~~~pl~~ 225 (257)
|-+.+.+.++.+... +...++-++||+... . ....+.++++|+.+....+.+.
T Consensus 285 vNDs~e~~~~La~ll~~l~~~VnLIpynP~~~~~~~~ps~e~i~~f~~iL~~~Gi~vtiR~~~G~ 349 (404)
T 3rfa_A 285 VNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGD 349 (404)
T ss_dssp TTCSHHHHHHHHHHTTTSCEEEEEEECCCCTTCCCCBCCHHHHHHHHHHHHHTTCEEEECCCCCC
T ss_pred CCCCHHHHHHHHHHHHcCCCcEEEEeccCCCCCCCCCCCHHHHHHHHHHHHHcCCcEEEcCCCCc
Confidence 445778888877664 445577778887532 1 3567778899999998877654
No 274
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=25.43 E-value=3.1e+02 Score=23.17 Aligned_cols=36 Identities=14% Similarity=0.078 Sum_probs=24.3
Q ss_pred HHHHHHHHHcCCeeEEEecCC-CHHHHHHHHHhCCCC
Q 025159 154 WEAMEECQNLGYTKAIGVSNF-SCKKLGDILATAKIP 189 (257)
Q Consensus 154 ~~~l~~l~~~G~ir~iGvs~~-~~~~l~~~~~~~~~~ 189 (257)
++...++++.=.+--|++..+ +++..+++++....+
T Consensus 266 ~~~~~~ir~~~~iPVi~~Ggi~t~e~Ae~~l~~G~aD 302 (343)
T 3kru_A 266 VKYAETIKKRCNIKTSAVGLITTQELAEEILSNERAD 302 (343)
T ss_dssp HHHHHHHHHHHTCEEEEESSCCCHHHHHHHHHTTSCS
T ss_pred ehHHHHHHHhcCcccceeeeeeHHHHHHHHHhchhhH
Confidence 344455555445666888875 689999998876544
No 275
>2eq8_C Pyruvate dehydrogenase complex, dihydrolipoamide acetyltransferase E2 component; protein-protein complex, oxidoreductase; HET: FAD; 1.94A {Thermus thermophilus}
Probab=25.24 E-value=51 Score=18.14 Aligned_cols=19 Identities=11% Similarity=0.296 Sum_probs=15.6
Q ss_pred hHHHHHHHHHhCCCccccc
Q 025159 238 CEVLKEIAEAKGKTVAQVL 256 (257)
Q Consensus 238 ~~~~~~ia~~~~~s~~qva 256 (257)
.+..+++|+++|+++.+|.
T Consensus 3 sP~ar~la~e~gidl~~v~ 21 (40)
T 2eq8_C 3 APSIRRLARELGVDLTRLR 21 (40)
T ss_dssp CHHHHHHHHHHTCCGGGCC
T ss_pred ChHHHHHHHHhCCChhhcC
Confidence 4778899999999888763
No 276
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=25.05 E-value=1.2e+02 Score=25.26 Aligned_cols=84 Identities=12% Similarity=0.091 Sum_probs=55.3
Q ss_pred HHHHHHcCCeeEEEecCCCHH--------HHHHHHHh-CCCCCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCCC
Q 025159 157 MEECQNLGYTKAIGVSNFSCK--------KLGDILAT-AKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGARG 227 (257)
Q Consensus 157 l~~l~~~G~ir~iGvs~~~~~--------~l~~~~~~-~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~G 227 (257)
+..+.+...++-++|++-+++ .++++++. ..++.+++-.+ -....++...|-++|+.|+.=.|++.
T Consensus 42 ~~~l~~~~~~~lvav~d~~~~~~g~~~~~~~~~ll~~~~~vD~V~i~tp---~~~H~~~~~~al~aGkhVl~EKP~a~-- 116 (330)
T 4ew6_A 42 LPSIAKNANFKLVATASRHGTVEGVNSYTTIEAMLDAEPSIDAVSLCMP---PQYRYEAAYKALVAGKHVFLEKPPGA-- 116 (330)
T ss_dssp HHHHHHCTTEEEEEEECSSCCCTTSEEESSHHHHHHHCTTCCEEEECSC---HHHHHHHHHHHHHTTCEEEECSSSCS--
T ss_pred HHHHHhCCCeEEEEEEeCChhhcCCCccCCHHHHHhCCCCCCEEEEeCC---cHHHHHHHHHHHHcCCcEEEeCCCCC--
Confidence 444555556777888765432 35666665 55554443222 12235788888999999999999986
Q ss_pred CCCCCCCccChHHHHHHHHHhCCC
Q 025159 228 TIWGSNRVMECEVLKEIAEAKGKT 251 (257)
Q Consensus 228 ~l~~~~~~~~~~~~~~ia~~~~~s 251 (257)
.......+.+.|++.|+.
T Consensus 117 ------~~~e~~~l~~~a~~~g~~ 134 (330)
T 4ew6_A 117 ------TLSEVADLEALANKQGAS 134 (330)
T ss_dssp ------SHHHHHHHHHHHHHHTCC
T ss_pred ------CHHHHHHHHHHHHhcCCe
Confidence 344557788888888864
No 277
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=24.82 E-value=38 Score=30.50 Aligned_cols=23 Identities=17% Similarity=0.098 Sum_probs=20.2
Q ss_pred hhHHHHHHHHHHHcCCceeeCCC
Q 025159 39 SETTKLAILEAMKLGYRHFDTAT 61 (257)
Q Consensus 39 ~~~~~~~l~~Al~~Gi~~~DtA~ 61 (257)
......+++.|++.|++++|||.
T Consensus 93 ~~~~l~Im~acleaGv~YlDTa~ 115 (480)
T 2ph5_A 93 GISSLALIILCNQKGALYINAAT 115 (480)
T ss_dssp SSCHHHHHHHHHHHTCEEEESSC
T ss_pred cccCHHHHHHHHHcCCCEEECCC
Confidence 34578999999999999999994
No 278
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=24.74 E-value=3.1e+02 Score=22.94 Aligned_cols=84 Identities=12% Similarity=0.067 Sum_probs=52.2
Q ss_pred HHHHHcCCeeEEEecCCCHHHHHHHHHhCCCC-------------CceeccccCCCCCcHHHHHHHHHCCceEEEecCCC
Q 025159 158 EECQNLGYTKAIGVSNFSCKKLGDILATAKIP-------------PAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLG 224 (257)
Q Consensus 158 ~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~-------------p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~ 224 (257)
..+.+...++-++|++-+++..+.+ +..+++ ++++-+ ..+-....++...|-+.|+.|+.=.|++
T Consensus 22 ~~l~~~~~~~l~av~d~~~~~~~~a-~~~g~~~~~~~~~ll~~~~~D~V~i-~tp~~~h~~~~~~al~aGkhVl~EKP~a 99 (359)
T 3e18_A 22 TLASAADNLEVHGVFDILAEKREAA-AQKGLKIYESYEAVLADEKVDAVLI-ATPNDSHKELAISALEAGKHVVCEKPVT 99 (359)
T ss_dssp HHHHTSTTEEEEEEECSSHHHHHHH-HTTTCCBCSCHHHHHHCTTCCEEEE-CSCGGGHHHHHHHHHHTTCEEEEESSCC
T ss_pred HHHHhCCCcEEEEEEcCCHHHHHHH-HhcCCceeCCHHHHhcCCCCCEEEE-cCCcHHHHHHHHHHHHCCCCEEeeCCCc
Confidence 3455556677788888887776533 222221 111110 1111122567788888999999999998
Q ss_pred CCCCCCCCCCccChHHHHHHHHHhCCC
Q 025159 225 ARGTIWGSNRVMECEVLKEIAEAKGKT 251 (257)
Q Consensus 225 ~~G~l~~~~~~~~~~~~~~ia~~~~~s 251 (257)
. .......+.+.|++.|+.
T Consensus 100 ~--------~~~ea~~l~~~a~~~g~~ 118 (359)
T 3e18_A 100 M--------TSEDLLAIMDVAKRVNKH 118 (359)
T ss_dssp S--------SHHHHHHHHHHHHHHTCC
T ss_pred C--------CHHHHHHHHHHHHHhCCe
Confidence 6 444567788888888864
No 279
>2uyg_A 3-dehydroquinate dehydratase; typeii 3-dehydroquinase, lyase; 2.2A {Thermus thermophilus}
Probab=24.32 E-value=1.6e+02 Score=21.94 Aligned_cols=79 Identities=13% Similarity=0.090 Sum_probs=56.5
Q ss_pred CChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHc---CCeeEEEecCCC
Q 025159 99 AHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNL---GYTKAIGVSNFS 175 (257)
Q Consensus 99 ~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---G~ir~iGvs~~~ 175 (257)
.+.+.+.+.+++..+.+|++ ++.+|=.. -.++.+++.+..++ |-|-.=|--+|+
T Consensus 24 ~tl~di~~~l~~~a~~~g~~-v~~~QSN~----------------------EgeLId~Ih~a~~~~~dgiIINpgA~THt 80 (149)
T 2uyg_A 24 TTLEELEALCEAWGAELGLG-VVFRQTNY----------------------EGQLIEWVQQAHQEGFLAIVLNPGALTHY 80 (149)
T ss_dssp CCHHHHHHHHHHHHHHTTCC-EEEEECSC----------------------HHHHHHHHHHTTTTTCSEEEEECGGGGGT
T ss_pred CCHHHHHHHHHHHHHHcCCE-EEEEeeCC----------------------HHHHHHHHHHhccCCeeEEEEccchhccc
Confidence 36788999999999999974 66665221 35788888888765 345444777777
Q ss_pred HHHHHHHHHhCCCCCceeccccCCCCC
Q 025159 176 CKKLGDILATAKIPPAANQVEMNPLWQ 202 (257)
Q Consensus 176 ~~~l~~~~~~~~~~p~~~q~~~~~~~~ 202 (257)
.--+.+++....++ ++.+.+|..+.
T Consensus 81 SvAlrDAl~~v~~P--~VEVHiSNi~a 105 (149)
T 2uyg_A 81 SYALLDAIRAQPLP--VVEVHLTNLHA 105 (149)
T ss_dssp CHHHHHHHHTSCSC--EEEEESSCGGG
T ss_pred cHHHHHHHHhCCCC--EEEEEecCccc
Confidence 77778888877666 77777776654
No 280
>2r6f_A Excinuclease ABC subunit A; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, at cassette, DNA damage, DNA excision; HET: ADP; 3.20A {Geobacillus stearothermophilus} PDB: 3uwx_A
Probab=24.31 E-value=2.9e+02 Score=27.21 Aligned_cols=61 Identities=23% Similarity=0.327 Sum_probs=43.9
Q ss_pred hHHHHHHHHHHhhCCCcc-----------------------------cEEEeecCCCCCCCCCCCCCcccCCCCccHHHH
Q 025159 103 LVVPALQKSLENLQLEYI-----------------------------DLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSV 153 (257)
Q Consensus 103 ~i~~~l~~sL~~Lg~d~l-----------------------------Dl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (257)
.+.+.+ +.|..+|++|+ ++|+|.-|..... ....+.+
T Consensus 480 ei~~Rl-~~L~~vGL~~l~ldR~~~tLSGGEkQRV~LA~aL~~~~~~~llILDEPTagLd-------------p~~~~~L 545 (972)
T 2r6f_A 480 EIRDRL-GFLQNVGLDYLTLSRSAGTLSGGEAQRIRLATQIGSRLTGVLYVLDEPSIGLH-------------QRDNDRL 545 (972)
T ss_dssp HHHHHH-HHHHHHTCTTSBSSSBGGGCCHHHHHHHHHHHHHTTCCCSCEEEEECTTTTCC-------------GGGHHHH
T ss_pred HHHHHH-HHhhhCCCCccccCCccccCCHHHHHHHHHHHHHhhCCCCCEEEEeCcccCCC-------------HHHHHHH
Confidence 455556 35888898876 4677776655322 4557899
Q ss_pred HHHHHHHHHcCCeeEEEecCCCHHHH
Q 025159 154 WEAMEECQNLGYTKAIGVSNFSCKKL 179 (257)
Q Consensus 154 ~~~l~~l~~~G~ir~iGvs~~~~~~l 179 (257)
++.|.+|++.|.. |=|..|+.+.+
T Consensus 546 ~~~L~~Lr~~G~T--VIvVeHdl~~i 569 (972)
T 2r6f_A 546 IATLKSMRDLGNT--LIVVEHDEDTM 569 (972)
T ss_dssp HHHHHHHHTTTCE--EEEECCCHHHH
T ss_pred HHHHHHHHhCCCE--EEEEecCHHHH
Confidence 9999999998874 67888887654
No 281
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=24.18 E-value=2.6e+02 Score=24.36 Aligned_cols=90 Identities=12% Similarity=0.029 Sum_probs=44.6
Q ss_pred CcEEEEeccCCCC-------CChhhHHHHHHHHHHh-hCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHH
Q 025159 86 DELFIASKLWCSD-------AHRELVVPALQKSLEN-LQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAM 157 (257)
Q Consensus 86 ~~l~i~tK~~~~~-------~~~~~i~~~l~~sL~~-Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 157 (257)
+++.|..|+.+.+ .+.+.... +-+.|+. .|+|||++ |........ +..+...... . .+..+.+
T Consensus 241 ~~f~v~vRis~~~~~~~~~G~~~ed~~~-la~~L~~~~Gvd~I~v---s~g~~~~~~-~~~~~~g~~~-~---~~~a~~I 311 (419)
T 3l5a_A 241 DNFILGFRATPEETRGSDLGYTIDEFNQ-LIDWVMDVSNIQYLAI---ASWGRHIYQ-NTSRTPGDHF-G---RPVNQIV 311 (419)
T ss_dssp TTCEEEEEECSCEEETTEEEECHHHHHH-HHHHHHHHSCCCCEEE---CCTTCCGGG-CBCCCSSTTT-T---SBHHHHH
T ss_pred CCeeEEEecccccccCCCCCCCHHHHHH-HHHHHHhhcCCcEEEE---eeCCccccc-cccCCCCccc-c---HHHHHHH
Confidence 5778999986642 23344333 3445556 88777664 443220000 0000000000 0 0122222
Q ss_pred HHHHHcCCeeEEEecC-CCHHHHHHHHHh
Q 025159 158 EECQNLGYTKAIGVSN-FSCKKLGDILAT 185 (257)
Q Consensus 158 ~~l~~~G~ir~iGvs~-~~~~~l~~~~~~ 185 (257)
.+.. .|+|--|++.+ ++++..+++++.
T Consensus 312 k~~v-~~~iPVI~~GgI~t~e~Ae~~L~~ 339 (419)
T 3l5a_A 312 YEHL-AGRIPLIASGGINSPESALDALQH 339 (419)
T ss_dssp HHHH-TTSSCEEECSSCCSHHHHHHHGGG
T ss_pred HHHc-CCCCeEEEECCCCCHHHHHHHHHh
Confidence 2222 35677788888 589999998876
No 282
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=24.14 E-value=1.2e+02 Score=25.01 Aligned_cols=53 Identities=21% Similarity=0.190 Sum_probs=37.7
Q ss_pred HHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHH-cCCee
Q 025159 104 VVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQN-LGYTK 167 (257)
Q Consensus 104 i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~G~ir 167 (257)
.++.|.+.|++||+..=|.+++|.--.... +..-..+.++++|.++.. +|-+-
T Consensus 16 t~~~l~~~L~~LGi~~Gd~llVHsSl~~lG-----------~v~gg~~~vi~AL~~~vg~~GTLv 69 (268)
T 3ijw_A 16 TIKTITNDLRKLGLKKGMTVIVHSSLSSIG-----------WISGGAVAVVEALMEVITEEGTII 69 (268)
T ss_dssp CHHHHHHHHHHHTCCTTCEEEEEECTGGGC-----------CBTTHHHHHHHHHHHHHCTTSEEE
T ss_pred CHHHHHHHHHHcCCCCCCEEEEEechHHhC-----------CCCCCHHHHHHHHHHHhCCCCeEE
Confidence 467788899999999999999997532111 111236789999988876 67653
No 283
>3guv_A Site-specific recombinase, resolvase family prote; structural genomics, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae}
Probab=24.01 E-value=76 Score=23.52 Aligned_cols=46 Identities=9% Similarity=0.148 Sum_probs=31.6
Q ss_pred HHHHHHHHHhhCCCc--ccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCC
Q 025159 105 VPALQKSLENLQLEY--IDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGY 165 (257)
Q Consensus 105 ~~~l~~sL~~Lg~d~--lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ 165 (257)
+..+.+.|+.+.-.. +|.+++...+...+ +..++...++.|.+.|-
T Consensus 59 Rp~l~~ll~~~~~g~~~~d~lvv~~ldRl~R---------------~~~~~~~~~~~l~~~gv 106 (167)
T 3guv_A 59 RIQFNRMMEDIKSGKDGVSFVLVFKLSRFAR---------------NAADVLSTLQIMQDYGV 106 (167)
T ss_dssp CHHHHHHHHHHHTCTTCCSEEEESCGGGTCS---------------SHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHcCCCCccEEEEEeCchhcC---------------CHHHHHHHHHHHHHCCC
Confidence 345566666665555 89999998866543 36677888888877764
No 284
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=23.85 E-value=3e+02 Score=22.98 Aligned_cols=81 Identities=16% Similarity=0.110 Sum_probs=50.3
Q ss_pred HHHcCCeeEEEecCCCHHHHHHHH-------------HhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCCC
Q 025159 160 CQNLGYTKAIGVSNFSCKKLGDIL-------------ATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGAR 226 (257)
Q Consensus 160 l~~~G~ir~iGvs~~~~~~l~~~~-------------~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~~ 226 (257)
+.+...++-++|++-+++.+.+.. +..+++.+++ ..+-....++...|-+.|+.|+.=+|++.
T Consensus 25 l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i---~tp~~~H~~~~~~al~aGkhVl~EKPla~- 100 (358)
T 3gdo_A 25 LDVLDEYQISKIMTSRTEEVKRDFPDAEVVHELEEITNDPAIELVIV---TTPSGLHYEHTMACIQAGKHVVMEKPMTA- 100 (358)
T ss_dssp HTTCTTEEEEEEECSCHHHHHHHCTTSEEESSTHHHHTCTTCCEEEE---CSCTTTHHHHHHHHHHTTCEEEEESSCCS-
T ss_pred HhhCCCeEEEEEEcCCHHHHHhhCCCCceECCHHHHhcCCCCCEEEE---cCCcHHHHHHHHHHHHcCCeEEEecCCcC-
Confidence 444445777888888876643321 1111222222 11222236788889999999999999986
Q ss_pred CCCCCCCCccChHHHHHHHHHhCCC
Q 025159 227 GTIWGSNRVMECEVLKEIAEAKGKT 251 (257)
Q Consensus 227 G~l~~~~~~~~~~~~~~ia~~~~~s 251 (257)
+......+.+.|++.|+.
T Consensus 101 -------~~~e~~~l~~~a~~~g~~ 118 (358)
T 3gdo_A 101 -------TAEEGETLKRAADEKGVL 118 (358)
T ss_dssp -------SHHHHHHHHHHHHHHTCC
T ss_pred -------CHHHHHHHHHHHHHcCCe
Confidence 444567788888888764
No 285
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=23.82 E-value=3.2e+02 Score=22.77 Aligned_cols=50 Identities=8% Similarity=0.033 Sum_probs=29.8
Q ss_pred CCCHHHHHHHHHhCCCCCceeccccCCCCC-cHHHHHHHHHCCceEEEecC
Q 025159 173 NFSCKKLGDILATAKIPPAANQVEMNPLWQ-QNKLREFCKAKDIQLAAYAP 222 (257)
Q Consensus 173 ~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~-~~~~~~~~~~~gi~v~~~~p 222 (257)
..+.+.++++++..+.+..+.-.+.|+... -.++.+.|+++|+-++.=.+
T Consensus 158 ~~d~~~l~~~i~~~~~~~v~~~~~~~~~~~~l~~i~~l~~~~~~~li~De~ 208 (425)
T 3ecd_A 158 LIDYDQVEALAQQHKPSLIIAGFSAYPRKLDFARFRAIADSVGAKLMVDMA 208 (425)
T ss_dssp SCCHHHHHHHHHHHCCSEEEEECSCCCSCCCHHHHHHHHHHHTCEEEEECG
T ss_pred ccCHHHHHHHHhhcCCcEEEEccccCCCcCCHHHHHHHHHHcCCEEEEECc
Confidence 347788887776434443333223333222 26788999999988876554
No 286
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=23.77 E-value=1.2e+02 Score=25.45 Aligned_cols=39 Identities=15% Similarity=0.172 Sum_probs=22.4
Q ss_pred HHHHHHHHHCCceEEEecCCCCCCCCCCCCCccChHHHHHHHHHhCC
Q 025159 204 NKLREFCKAKDIQLAAYAPLGARGTIWGSNRVMECEVLKEIAEAKGK 250 (257)
Q Consensus 204 ~~~~~~~~~~gi~v~~~~pl~~~G~l~~~~~~~~~~~~~~ia~~~~~ 250 (257)
.++...|-++|+.|+.=.|++. ++...+.+.+.|++.|+
T Consensus 108 ~~~a~~al~aGkhVl~EKPla~--------~~~ea~~l~~~a~~~g~ 146 (393)
T 4fb5_A 108 AEMAIAALEAGKHVWCEKPMAP--------AYADAERMLATAERSGK 146 (393)
T ss_dssp HHHHHHHHHTTCEEEECSCSCS--------SHHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHhcCCeEEEccCCcc--------cHHHHHHhhhhHHhcCC
Confidence 4555566666666666666654 33344555556666554
No 287
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=23.64 E-value=3.5e+02 Score=23.21 Aligned_cols=153 Identities=11% Similarity=0.164 Sum_probs=80.3
Q ss_pred HHHHHHHHHHcCCceeeC--CC-----CCC-C-hH---HHHHHHHHHHhCCCCCCCCcEEEEecc---CCCCCChhhHHH
Q 025159 42 TKLAILEAMKLGYRHFDT--AT-----LYQ-T-EQ---PLGDAIAEALSTGIIKSRDELFIASKL---WCSDAHRELVVP 106 (257)
Q Consensus 42 ~~~~l~~Al~~Gi~~~Dt--A~-----~Yg-~-e~---~lg~~l~~~~~~~~~~~R~~l~i~tK~---~~~~~~~~~i~~ 106 (257)
+.+.++.+.+.|+.|++. +| ..| + +. .+-+++++.- .++=|.+|+ .....+++...+
T Consensus 98 a~e~~ed~a~dgV~Y~Eirf~P~~~~~~~Gl~~~~vv~av~~g~~~a~--------~~~gi~~rlI~~~~R~~~~e~a~~ 169 (380)
T 4gxw_A 98 AYEYLEDAAAHNVRHAEFFWNPTGTVRVSGIPYADAQAAIVTGMRDAA--------RDFGIGARLIPSIDREQDPDEAVA 169 (380)
T ss_dssp HHHHHHHHHTTTEEEEEEEECHHHHHHTTCCCHHHHHHHHHHHHHHHH--------HHHCCEEEEEEEEETTSCHHHHHH
T ss_pred HHHHHHHHHHCCCeEEEEEcCHHHhccccCCCHHHHHHHHHHHHHHHH--------HhcCCcEEEEEeecCCCCHHHHHH
Confidence 456677777889998763 22 122 2 22 2233333331 111123332 223456777777
Q ss_pred HHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEE--EecCCCHHHHHHHHH
Q 025159 107 ALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAI--GVSNFSCKKLGDILA 184 (257)
Q Consensus 107 ~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~i--Gvs~~~~~~l~~~~~ 184 (257)
.++..++..+ +.|--+=|.......| ....+++++.+++.|.-..+ |=.+...+.+.++++
T Consensus 170 ~~~~a~~~~~-~~VvG~dL~g~E~~~p----------------~~~f~~~f~~ar~~Gl~~t~HAGE~~~p~~~i~~al~ 232 (380)
T 4gxw_A 170 IVDWMKANRA-DEVAGIGIDYRENDRP----------------PELFWKAYRDARAAGFRTTAHAGEFGMPWRNVETAVD 232 (380)
T ss_dssp HHHHHHHTCC-TTBCEEEEESCCTTCC----------------GGGGHHHHHHHHHTTCEEEEEESCTTCCHHHHHHHHH
T ss_pred HHHHHHHhCC-CCEEEEeecCCCCCCC----------------HHHHHHHHHHHHHcCCCeeeeccccCCchHHHHHHHH
Confidence 7776665432 2232232333322111 34567788889999974444 443444567777776
Q ss_pred hCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEecCC
Q 025159 185 TAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPL 223 (257)
Q Consensus 185 ~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl 223 (257)
..+.+ =+-.-++.. .+.++++.+++++|++-.. |.
T Consensus 233 ~lga~--RIgHG~~~~-~d~~L~~~l~~~~I~lEvC-P~ 267 (380)
T 4gxw_A 233 LLHVD--RVDHGYTIV-DNPELCARYAERGIVFTVV-PT 267 (380)
T ss_dssp TSCCS--EEEECGGGG-GCHHHHHHHHHHTCEEEEC-TT
T ss_pred HcCCc--ccccceeec-cChHHHHHHHHhCceeEEC-Cc
Confidence 54432 111122221 2357899999999987654 44
No 288
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=23.52 E-value=3e+02 Score=22.43 Aligned_cols=84 Identities=8% Similarity=0.037 Sum_probs=51.0
Q ss_pred HHHHcCCeeEEEecCCCHHHHHHHHHhCCCCCce---ec------cccCCCC----CcHHHHHHHHHCCceEEEecCCCC
Q 025159 159 ECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAA---NQ------VEMNPLW----QQNKLREFCKAKDIQLAAYAPLGA 225 (257)
Q Consensus 159 ~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~p~~---~q------~~~~~~~----~~~~~~~~~~~~gi~v~~~~pl~~ 225 (257)
.+.+ ..++-+++++-+++..+++.+...++... .. +..-... ...++...|-++|..|+.-+|++.
T Consensus 19 ~l~~-~~~~~vav~d~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk~v~~ekP~~~ 97 (332)
T 2glx_A 19 AIRA-TGGEVVSMMSTSAERGAAYATENGIGKSVTSVEELVGDPDVDAVYVSTTNELHREQTLAAIRAGKHVLCEKPLAM 97 (332)
T ss_dssp HHHH-TTCEEEEEECSCHHHHHHHHHHTTCSCCBSCHHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCS
T ss_pred Hhhc-CCCeEEEEECCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChhHhHHHHHHHHHCCCeEEEeCCCcC
Confidence 3444 45677899999988877766554432000 00 0000001 124667778888999999999975
Q ss_pred CCCCCCCCCccChHHHHHHHHHhCCC
Q 025159 226 RGTIWGSNRVMECEVLKEIAEAKGKT 251 (257)
Q Consensus 226 ~G~l~~~~~~~~~~~~~~ia~~~~~s 251 (257)
.......+.+.|++.|+.
T Consensus 98 --------~~~~~~~l~~~a~~~g~~ 115 (332)
T 2glx_A 98 --------TLEDAREMVVAAREAGVV 115 (332)
T ss_dssp --------SHHHHHHHHHHHHHHTCC
T ss_pred --------CHHHHHHHHHHHHHcCCE
Confidence 333456778888888764
No 289
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=23.46 E-value=3.1e+02 Score=22.52 Aligned_cols=124 Identities=10% Similarity=0.015 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHc-CCeeEEEecCCCHHHHHHHH
Q 025159 105 VPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNL-GYTKAIGVSNFSCKKLGDIL 183 (257)
Q Consensus 105 ~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-G~ir~iGvs~~~~~~l~~~~ 183 (257)
+..+-+.|.++|+++|++-.--+. ..-|+.+..+.+. ..++..+++......++.++
T Consensus 29 K~~i~~~L~~~Gv~~IE~g~p~~~----------------------~~d~e~v~~i~~~~~~~~i~~l~~~~~~di~~a~ 86 (293)
T 3ewb_X 29 KIQIALQLEKLGIDVIEAGFPISS----------------------PGDFECVKAIAKAIKHCSVTGLARCVEGDIDRAE 86 (293)
T ss_dssp HHHHHHHHHHHTCSEEEEECGGGC----------------------HHHHHHHHHHHHHCCSSEEEEEEESSHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCC----------------------ccHHHHHHHHHHhcCCCEEEEEecCCHHHHHHHH
Q ss_pred Hh---CCCCCceeccccCCCCCc--------------HHHHHHHHHCCceEEEecCCCCCCCCCCCCCccChHHHHHHHH
Q 025159 184 AT---AKIPPAANQVEMNPLWQQ--------------NKLREFCKAKDIQLAAYAPLGARGTIWGSNRVMECEVLKEIAE 246 (257)
Q Consensus 184 ~~---~~~~p~~~q~~~~~~~~~--------------~~~~~~~~~~gi~v~~~~pl~~~G~l~~~~~~~~~~~~~~ia~ 246 (257)
+. ++.+-..+-...|-.+.. .+.+++++++|+.+...-+-++ ..++..--.+.+.+.
T Consensus 87 ~~~~~ag~~~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~d~~------~~~~~~~~~~~~~~~ 160 (293)
T 3ewb_X 87 EALKDAVSPQIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPEDAT------RSDRAFLIEAVQTAI 160 (293)
T ss_dssp HHHTTCSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEETGG------GSCHHHHHHHHHHHH
T ss_pred HHHhhcCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccCC------CCCHHHHHHHHHHHH
Q ss_pred HhCCCccccc
Q 025159 247 AKGKTVAQVL 256 (257)
Q Consensus 247 ~~~~s~~qva 256 (257)
+.|.....++
T Consensus 161 ~~G~~~i~l~ 170 (293)
T 3ewb_X 161 DAGATVINIP 170 (293)
T ss_dssp HTTCCEEEEE
T ss_pred HcCCCEEEec
No 290
>3p0w_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, protein structure initiative; HET: GKR; 1.71A {Ralstonia pickettii} PDB: 4hn8_A 3nxl_A
Probab=23.42 E-value=2.1e+02 Score=25.44 Aligned_cols=153 Identities=8% Similarity=-0.012 Sum_probs=85.3
Q ss_pred CChhHHHHHHHHHHH-cCCceeeCCCCCCC-hH--HHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHH
Q 025159 37 SGSETTKLAILEAMK-LGYRHFDTATLYQT-EQ--PLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSL 112 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~-~Gi~~~DtA~~Yg~-e~--~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL 112 (257)
.++++..+..+.+++ .|++.|=.--...+ +. ..=+++|+. . +++-|..-... .++++ ...+.+
T Consensus 199 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~rv~avRea---~-----pd~~L~vDaN~-~w~~~----~Ai~~~ 265 (470)
T 3p0w_A 199 MTPAAIARLAEAATERYGFADFKLKGGVMPGAEEMEAIAAIKAR---F-----PHARVTLDPNG-AWSLN----EAIALC 265 (470)
T ss_dssp CSHHHHHHHHHHHHHHHCCSEEEEECSSSCHHHHHHHHHHHHHH---C-----TTSEEEEECTT-BBCHH----HHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEeCCCCCHHHHHHHHHHHHHh---C-----CCCeEEeeCCC-CCCHH----HHHHHH
Confidence 366777888888887 69998743222111 21 222345554 1 23444443322 23332 233445
Q ss_pred HhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe-eEEEecCCCHHHHHHHHHhCCCCCc
Q 025159 113 ENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT-KAIGVSNFSCKKLGDILATAKIPPA 191 (257)
Q Consensus 113 ~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~p~ 191 (257)
+.|. ++ +.++..|.... +..+.++.|.++++.-.| -+.|-+.++...+.++++...++
T Consensus 266 ~~Le-~~--l~~iEeP~~~~----------------d~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~d-- 324 (470)
T 3p0w_A 266 KGQG-HL--VAYAEDPCGPE----------------AGYSGREVMAEFKRATGIPTATNMIATDWRQMGHAVQLHAVD-- 324 (470)
T ss_dssp TTCT-TT--CSEEESCBCCB----------------TTBCHHHHHHHHHHHHCCCEEESSSSCSHHHHHHHHHTTCCS--
T ss_pred Hhcc-cc--ceeecCCCChh----------------hccchHHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcCCCC--
Confidence 5554 33 67788774321 110114555666654333 34566777888899988876655
Q ss_pred eeccccCC--CCCcHHHHHHHHHCCceEEEecCC
Q 025159 192 ANQVEMNP--LWQQNKLREFCKAKDIQLAAYAPL 223 (257)
Q Consensus 192 ~~q~~~~~--~~~~~~~~~~~~~~gi~v~~~~pl 223 (257)
++|..... +..-..+.+.|+++|+.+..++..
T Consensus 325 iv~~d~~~GGit~a~kia~lA~a~gv~~~~h~~~ 358 (470)
T 3p0w_A 325 IPLADPHFWTMQGSVRVAQLCDEWGLTWGSHSNN 358 (470)
T ss_dssp EEBCCHHHHCHHHHHHHHHHHHHHTCCCBCCCCS
T ss_pred EEEecCccCCHHHHHHHHHHHHHcCCEEEecCCc
Confidence 66655321 112267899999999998776544
No 291
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=23.38 E-value=3e+02 Score=22.28 Aligned_cols=51 Identities=12% Similarity=0.134 Sum_probs=34.5
Q ss_pred ccceeCCcCCCCChh-HHHHHHHHHHHcCCceeeCCC-----CCC-ChHHHHHHHHHH
Q 025159 26 VLGLGTAASPFSGSE-TTKLAILEAMKLGYRHFDTAT-----LYQ-TEQPLGDAIAEA 76 (257)
Q Consensus 26 ~lglG~~~~~~~~~~-~~~~~l~~Al~~Gi~~~DtA~-----~Yg-~e~~lg~~l~~~ 76 (257)
+||+-++.+...-.+ ...+.++.|-+.|++.++... .|+ .-..+.+.+++.
T Consensus 14 ~~g~~~~s~~~~~~~~~~~~~l~~~a~~G~~~VEl~~~~~~~~~~~~~~~~~~~l~~~ 71 (303)
T 3l23_A 14 EIGLQIYSLSQELYKGDVAANLRKVKDMGYSKLELAGYGKGAIGGVPMMDFKKMAEDA 71 (303)
T ss_dssp CCEEEGGGGGGGGGSSCHHHHHHHHHHTTCCEEEECCEETTEETTEEHHHHHHHHHHT
T ss_pred ceEEEEEEchhhhccCCHHHHHHHHHHcCCCEEEeccccCcccCCCCHHHHHHHHHHc
Confidence 577777776431112 578999999999999999875 344 345556666654
No 292
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=23.33 E-value=90 Score=26.03 Aligned_cols=120 Identities=10% Similarity=0.048 Sum_probs=66.5
Q ss_pred ChhHHHHHHHHHHHcCCceeeCC----------CCCC-----ChHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChh
Q 025159 38 GSETTKLAILEAMKLGYRHFDTA----------TLYQ-----TEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRE 102 (257)
Q Consensus 38 ~~~~~~~~l~~Al~~Gi~~~DtA----------~~Yg-----~e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~ 102 (257)
+++...++.+.|.+. +..+|.. ..|| ..+.+-+.++...+. -.+-|+.|+.......+
T Consensus 69 ~~~~~~~aa~~a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~------~~~pv~vKir~G~~~~~ 141 (318)
T 1vhn_A 69 EPNELSEAARILSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKS------VSGKFSVKTRLGWEKNE 141 (318)
T ss_dssp CHHHHHHHHHHHTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHH------CSSEEEEEEESCSSSCC
T ss_pred CHHHHHHHHHHHHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHh------hCCCEEEEecCCCChHH
Confidence 567788888888888 8877653 3465 245556666654211 12568888643211122
Q ss_pred hHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCeeEEEecCC-CHHHHHH
Q 025159 103 LVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYTKAIGVSNF-SCKKLGD 181 (257)
Q Consensus 103 ~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~-~~~~l~~ 181 (257)
.+ .+-+.++..|+|+| .+|.-..... .. . . ..|+.+.++++ .+--|+..+. +++.+.+
T Consensus 142 ~~--~~a~~l~~~G~d~i---~v~g~~~~~~--~~---~-----~----~~~~~i~~i~~--~ipVi~~GgI~s~~da~~ 200 (318)
T 1vhn_A 142 VE--EIYRILVEEGVDEV---FIHTRTVVQS--FT---G-----R----AEWKALSVLEK--RIPTFVSGDIFTPEDAKR 200 (318)
T ss_dssp HH--HHHHHHHHTTCCEE---EEESSCTTTT--TS---S-----C----CCGGGGGGSCC--SSCEEEESSCCSHHHHHH
T ss_pred HH--HHHHHHHHhCCCEE---EEcCCCcccc--CC---C-----C----cCHHHHHHHHc--CCeEEEECCcCCHHHHHH
Confidence 22 55566777886555 5575422110 00 0 0 11233444554 5666777774 7888888
Q ss_pred HHHh
Q 025159 182 ILAT 185 (257)
Q Consensus 182 ~~~~ 185 (257)
+++.
T Consensus 201 ~l~~ 204 (318)
T 1vhn_A 201 ALEE 204 (318)
T ss_dssp HHHH
T ss_pred HHHc
Confidence 8774
No 293
>1a6f_A RNAse P protein, ribonuclease P protein; endonuclease, subunit; 2.60A {Bacillus subtilis} SCOP: d.14.1.2
Probab=23.28 E-value=1.9e+02 Score=20.21 Aligned_cols=31 Identities=19% Similarity=0.153 Sum_probs=24.4
Q ss_pred cEEEEeccCCCCCChhhHHHHHHHHHHhhCC
Q 025159 87 ELFIASKLWCSDAHRELVVPALQKSLENLQL 117 (257)
Q Consensus 87 ~l~i~tK~~~~~~~~~~i~~~l~~sL~~Lg~ 117 (257)
+++|..+-.....+.+.+.++++..|+++++
T Consensus 82 d~Vviar~~~~~~~~~~l~~~l~~ll~k~~~ 112 (119)
T 1a6f_A 82 DYIIIARKPASQLTYEETKKSLQHLFRKSSL 112 (119)
T ss_dssp EEEEEECGGGTTCCHHHHHHHHHHHHHHTTC
T ss_pred CEEEEEECCcccCCHHHHHHHHHHHHHHhcC
Confidence 7777777555566778899999999998886
No 294
>1w4i_A Pyruvate dehydrogenase E2; transferase, peripheral-subunit binding domain, ultrafast folding, homologues,; NMR {Pyrobaculum aerophilum} PDB: 1w4j_A 1w4k_A
Probab=23.13 E-value=58 Score=20.24 Aligned_cols=22 Identities=18% Similarity=0.271 Sum_probs=16.7
Q ss_pred ccChHHHHHHHHHhCCCccccc
Q 025159 235 VMECEVLKEIAEAKGKTVAQVL 256 (257)
Q Consensus 235 ~~~~~~~~~ia~~~~~s~~qva 256 (257)
....+....+|+++|+++.+|.
T Consensus 5 ~~asPaaRklA~e~gidl~~V~ 26 (62)
T 1w4i_A 5 VAAMPAARRLAKELGIDLSKVK 26 (62)
T ss_dssp SEECHHHHHHHHHHTCCGGGSC
T ss_pred ccCChHHHHHHHHhCCChhhcC
Confidence 3445788889999998887763
No 295
>3sma_A FRBF; N-acetyl transferase, acetyl COA binding, transferase; HET: ACO; 2.00A {Streptomyces rubellomurinus}
Probab=23.05 E-value=1.5e+02 Score=24.57 Aligned_cols=54 Identities=15% Similarity=0.130 Sum_probs=38.9
Q ss_pred hHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHH-HcCCee
Q 025159 103 LVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQ-NLGYTK 167 (257)
Q Consensus 103 ~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~G~ir 167 (257)
..++.|.+.|+.||+..=|.+++|.--.... +-.-..+.++++|.++. ++|-+-
T Consensus 22 ~T~~~L~~~L~~LGI~~Gd~llVHsSL~~lG-----------~v~Gga~~vi~AL~~~vg~~GTLv 76 (286)
T 3sma_A 22 VTRDRLASDLAALGVRPGGVLLVHASLSALG-----------WVCGGAQAVVLALQDAVGKEGTLV 76 (286)
T ss_dssp ECHHHHHHHHHHHTCCTTCEEEEEECSTTSC-----------EETTHHHHHHHHHHHHHCTTCEEE
T ss_pred cCHHHHHHHHHHcCCCCCCEEEEEechHHhC-----------CCCCCHHHHHHHHHHHhcCCCEEE
Confidence 4567889999999999999999997532111 11123678999998887 477654
No 296
>2opj_A O-succinylbenzoate-COA synthase; TIM barrel, structural genomics, protein structure initiative; 1.60A {Thermobifida fusca} PDB: 2qvh_A*
Probab=23.00 E-value=46 Score=28.09 Aligned_cols=70 Identities=7% Similarity=0.000 Sum_probs=34.2
Q ss_pred HHHHHHHHHcCCe-eEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHHHCCceEEEecCCCC
Q 025159 154 WEAMEECQNLGYT-KAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCKAKDIQLAAYAPLGA 225 (257)
Q Consensus 154 ~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~~~gi~v~~~~pl~~ 225 (257)
++.|.+|.+.-.| -+.|=|-++...+.++++...++ ++|+...-+.--.+.++.|+..|+.++..+.+.+
T Consensus 162 ~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~~a~d--~i~ik~~~~GGit~~~~ia~~~gi~~~~~~~~es 232 (327)
T 2opj_A 162 VDELAEVRRRVSVPIAADESIRRAEDPLRVRDAEAAD--VVVLKVQPLGGVRAALRLAEECGLPVVVSSAVET 232 (327)
T ss_dssp HHHHHHHHHHCSSCEEC-----------CTTTTTCCS--BEEECHHHHTSHHHHHHHHHHTCSCEEEBCCSCC
T ss_pred HHHHHHHHhhCCCCEEcCCCCCCHHHHHHHHHhCCCC--EEEeCccccCCHHHHHHHHHHcCCcEEEcCCCcC
Confidence 3455566554333 23455555555555554433333 5555543322235677889999999998887754
No 297
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=22.65 E-value=1.5e+02 Score=25.02 Aligned_cols=22 Identities=9% Similarity=0.040 Sum_probs=11.5
Q ss_pred HHHHHHHHHCCceEEEecCCCC
Q 025159 204 NKLREFCKAKDIQLAAYAPLGA 225 (257)
Q Consensus 204 ~~~~~~~~~~gi~v~~~~pl~~ 225 (257)
.++...|-++|+.|+.=.|++.
T Consensus 97 ~~~~~~al~~Gk~V~~EKP~a~ 118 (383)
T 3oqb_A 97 PGLLTQAINAGKHVYCEKPIAT 118 (383)
T ss_dssp HHHHHHHHTTTCEEEECSCSCS
T ss_pred HHHHHHHHHCCCeEEEcCCCCC
Confidence 3455555555555555555543
No 298
>3u5c_M 40S ribosomal protein S12, 40S ribosomal protein S11-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3u5g_M
Probab=22.62 E-value=1.1e+02 Score=22.67 Aligned_cols=65 Identities=6% Similarity=-0.012 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCCcHHHHHHHH--HCCceEEEec
Q 025159 151 KSVWEAMEECQNLGYTKAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQQNKLREFCK--AKDIQLAAYA 221 (257)
Q Consensus 151 ~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~~~~~~~~~~--~~gi~v~~~~ 221 (257)
..+.+.|......|++. .|+ .+..++++.......++--+.++-+.-..+..+|+ +++|+++-..
T Consensus 26 ~aL~~vLk~A~~~g~l~-~G~-----~et~Kal~kg~a~LvvLA~D~~~~~i~k~i~~lC~~~e~~IP~i~V~ 92 (143)
T 3u5c_M 26 DALKVVLRTALVHDGLA-RGL-----RESTKALTRGEALLVVLVSSVTEANIIKLVEGLANDPENKVPLIKVA 92 (143)
T ss_dssp HHHHHHHHHHHHTTCEE-ESH-----HHHHHHHSSTTCSCEECCSCCSTTHHHHHHHHHHHCSSSCCCCCCCS
T ss_pred HHHHHHHHHHHHcCCEe-EcH-----HHHHHHHhcCceeEEEEeCCCCHHHHHHHHHHHHhhhhhCCCEEEEC
Confidence 34556666667778864 676 67777777776666666555443333356778999 9999987654
No 299
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=22.54 E-value=1.6e+02 Score=23.44 Aligned_cols=62 Identities=19% Similarity=0.290 Sum_probs=36.7
Q ss_pred HHHcCCeeEEEecCCCHHHHHHHHHhCC-CCCcee-------------ccccCCCC-----CcHHHHHHHHHCCceEEEe
Q 025159 160 CQNLGYTKAIGVSNFSCKKLGDILATAK-IPPAAN-------------QVEMNPLW-----QQNKLREFCKAKDIQLAAY 220 (257)
Q Consensus 160 l~~~G~ir~iGvs~~~~~~l~~~~~~~~-~~p~~~-------------q~~~~~~~-----~~~~~~~~~~~~gi~v~~~ 220 (257)
+++.|....+=+++|+++.+..+.+... ++.... ......+. -..++++.++++|+.|.+|
T Consensus 138 l~~~~~~~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~v~~~~~~G~~v~~w 217 (252)
T 2pz0_A 138 IKEYNFEERVIISSFNHYSLRDVKKMAPHLKIGLLYQCGLVEPWHMALRMEAYSLHPFYFNIIPELVEGCKKNGVKLFPW 217 (252)
T ss_dssp HHHTTCTTTEEEEESBHHHHHHHHHHCTTSEEEEEECSBCSSTHHHHHHTTCSEEEEBGGGCCHHHHHHHHHTTCEECCB
T ss_pred HHhcCCCCCEEEEeCCHHHHHHHHHHCCCCCEEEEecCccccHHHHHHHcCCeEEecchhcCCHHHHHHHHHCCCEEEEE
Confidence 3344555556699999999888866543 111000 00000000 1257899999999999998
Q ss_pred c
Q 025159 221 A 221 (257)
Q Consensus 221 ~ 221 (257)
.
T Consensus 218 T 218 (252)
T 2pz0_A 218 T 218 (252)
T ss_dssp C
T ss_pred C
Confidence 5
No 300
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=22.52 E-value=1.6e+02 Score=26.57 Aligned_cols=155 Identities=17% Similarity=0.165 Sum_probs=85.2
Q ss_pred CChHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCccc
Q 025159 64 QTEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKE 143 (257)
Q Consensus 64 g~e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~ 143 (257)
|.++.+-+++++.++.. +-+-++|.|-+-+.- |=..++...++++. .+.++.+|.|.....
T Consensus 68 G~e~kL~~aI~~~~~~~---~P~~I~V~tTC~~el-----IGdDi~~v~~~~~~-~~pVi~v~tpgf~g~---------- 128 (525)
T 3aek_B 68 DTAILLKDALAAAHARY---KPQAMAVALTCTAEL-----LQDDPNGISRALNL-PVPVVPLELPSYSRK---------- 128 (525)
T ss_dssp HHHHHHHHHHHHHHHHH---CCSEEEEEECTTGGG-----SCCCHHHHHHHHTC-SSCEEECCCCTTTCC----------
T ss_pred CcHHHHHHHHHHHHHhc---CCCEEEEECCcHHHH-----hcccHHHHHHHhcC-CCCEEEEECCCcCCc----------
Confidence 35667777777665443 234577777764321 11112333333333 478999998854321
Q ss_pred CCCCccHHHHHHHHHHHHH----------cCCeeEEEecCC------CHHHHHHHHHhCCCCCceeccc-----------
Q 025159 144 DFLPMDFKSVWEAMEECQN----------LGYTKAIGVSNF------SCKKLGDILATAKIPPAANQVE----------- 196 (257)
Q Consensus 144 ~~~~~~~~~~~~~l~~l~~----------~G~ir~iGvs~~------~~~~l~~~~~~~~~~p~~~q~~----------- 196 (257)
.....-.++..+.+ .++|--||..+. +.+++.++++..++.+... ++
T Consensus 129 -----~~~G~~~al~alv~~~~~~~~~~~~~~VNIlG~~~~g~~~~gD~~eikrlL~~~Gi~v~~~-~pgg~t~~ei~~~ 202 (525)
T 3aek_B 129 -----ENYGADETFRALVRALAVPMERTPEVTCNLLGATALGFRHRDDVAEVTKLLATMGIKVNVC-APLGASPDDLRKL 202 (525)
T ss_dssp -----HHHHHHHHHHHHHHHHCCCCCCCSSCEEEEEEECTTCTTHHHHHHHHHHHHHTTTCEEEEE-EETTCCHHHHHTG
T ss_pred -----hhHHHHHHHHHHHHHhccCccCCCCCceEEEecCCCCCCChhhHHHHHHHHHHCCCeEEEE-eCCCCCHHHHHhh
Confidence 12233333333332 256888998873 4577889999888764332 11
Q ss_pred ----cCCC-CCc--HHHHHHHH-HCCceEEEecCCCCCCCCCCCCCccChHHHHHHHHHhCCCc
Q 025159 197 ----MNPL-WQQ--NKLREFCK-AKDIQLAAYAPLGARGTIWGSNRVMECEVLKEIAEAKGKTV 252 (257)
Q Consensus 197 ----~~~~-~~~--~~~~~~~~-~~gi~v~~~~pl~~~G~l~~~~~~~~~~~~~~ia~~~~~s~ 252 (257)
+|+. ++. ...-++.+ +.|++.+...|++- -....-+.+||+-.|.+.
T Consensus 203 ~~A~~niv~~~~~g~~~A~~Le~r~GiP~i~~~PiG~---------~~T~~~Lr~ia~~~g~~~ 257 (525)
T 3aek_B 203 GQAHFNVLMYPETGESAARHLERACKQPFTKIVPIGV---------GATRDFLAEVSKITGLPV 257 (525)
T ss_dssp GGSSEEEECCHHHHHHHHHHHHHHSCCCBCCCCCCSH---------HHHHHHHHHHHHHHCCCC
T ss_pred ccCCEEEEEChhhHHHHHHHHHHHcCCCceecCCcCH---------HHHHHHHHHHHHHHCCCH
Confidence 1111 111 23344553 56999998777753 124566777777777643
No 301
>2nyg_A YOKD protein; PFAM02522, NYSGXRC, aminoglycoside 3-N- acetyltransferase, PSI-2, structural genomics, protein structure initiative; HET: COA; 2.60A {Bacillus subtilis} SCOP: c.140.1.2
Probab=22.48 E-value=1.4e+02 Score=24.61 Aligned_cols=53 Identities=17% Similarity=0.128 Sum_probs=37.6
Q ss_pred hHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHH-cCCe
Q 025159 103 LVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQN-LGYT 166 (257)
Q Consensus 103 ~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~G~i 166 (257)
..++.|.+.|+.||+..=|.+++|.--..-. +-.-..+.++++|.++.- +|-+
T Consensus 13 ~T~~~L~~~L~~LGI~~Gd~llVHsSl~~lG-----------~v~gg~~~vi~AL~~~vg~~GTL 66 (273)
T 2nyg_A 13 RTKQSITEDLKALGLKKGMTVLVHSSLSSIG-----------WVNGGAVAVIQALIDVVTEEGTI 66 (273)
T ss_dssp BCHHHHHHHHHHHTCCTTCEEEEEECSGGGC-----------CBTTHHHHHHHHHHHHHTTTSEE
T ss_pred cCHHHHHHHHHHcCCCCCCEEEEEechHHhC-----------CCCCCHHHHHHHHHHHhCCCCeE
Confidence 3467788899999999999999997422110 112236789999998764 6755
No 302
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=22.19 E-value=4e+02 Score=23.31 Aligned_cols=78 Identities=9% Similarity=0.048 Sum_probs=51.2
Q ss_pred ccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHc-C-Cee-EEEec-CCCHHHHHHHHHhCCCCCceecc
Q 025159 120 IDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNL-G-YTK-AIGVS-NFSCKKLGDILATAKIPPAANQV 195 (257)
Q Consensus 120 lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-G-~ir-~iGvs-~~~~~~l~~~~~~~~~~p~~~q~ 195 (257)
.++++|..|.... -|+.+.+|.+. | .|. ..|=+ .+++..+.++++...++ ++|+
T Consensus 295 ~~i~~iEePl~~~--------------------d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d--~i~i 352 (444)
T 1w6t_A 295 YPIITIEDGMDEN--------------------DWDGWKALTERLGKKVQLVGDDFFVTNTDYLARGIQEGAAN--SILI 352 (444)
T ss_dssp SCEEEEESCSCTT--------------------CHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCS--EEEE
T ss_pred CCcEEEECCCChh--------------------hHHHHHHHHHhhCCCCeEEeCCcccCCHHHHHHHHHcCCCC--EEEE
Confidence 4688999985421 23445555543 2 343 33444 67899999998876655 6666
Q ss_pred ccCCCCC---cHHHHHHHHHCCceEEE
Q 025159 196 EMNPLWQ---QNKLREFCKAKDIQLAA 219 (257)
Q Consensus 196 ~~~~~~~---~~~~~~~~~~~gi~v~~ 219 (257)
..+-+.- -..+...|+++|+.++.
T Consensus 353 k~~~~GGitea~~ia~lA~~~g~~v~~ 379 (444)
T 1w6t_A 353 KVNQIGTLTETFEAIEMAKEAGYTAVV 379 (444)
T ss_dssp CHHHHCSHHHHHHHHHHHHHTTCEEEE
T ss_pred cccccCCHHHHHHHHHHHHHCCCeEEe
Confidence 6543322 25789999999999987
No 303
>2eee_A Uncharacterized protein C6ORF130; macro domain, A1PP domain, ADP-ribose binding, rossmann fold, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l8r_A*
Probab=22.09 E-value=57 Score=24.03 Aligned_cols=26 Identities=27% Similarity=0.286 Sum_probs=14.6
Q ss_pred CcCCccceeCCcCCCCChhHHHHHHHHHH
Q 025159 22 RRMPVLGLGTAASPFSGSETTKLAILEAM 50 (257)
Q Consensus 22 ~~vs~lglG~~~~~~~~~~~~~~~l~~Al 50 (257)
+.+|+||.|...+ +.+++.+++..++
T Consensus 112 Ia~P~IgtG~~G~---~~~~v~~ii~~~~ 137 (149)
T 2eee_A 112 LSMPRIGCGLDRL---QWENVSAMIEEVF 137 (149)
T ss_dssp EECCCCCCTTTTC---CHHHHHHHHHHHH
T ss_pred EEeCCCCCCCCCC---CHHHHHHHHHHHh
Confidence 5566666665553 3455566655555
No 304
>3fxg_A Rhamnonate dehydratase; structural gemomics, enolase superfamily, NYSGXRC, target 9265J, lyase, structural genomics, PSI-2; 1.90A {Gibberella zeae ph-1} PDB: 2p0i_A
Probab=22.04 E-value=75 Score=28.35 Aligned_cols=66 Identities=12% Similarity=0.061 Sum_probs=47.9
Q ss_pred HHHHHHHHHcC-Ce-eEEEecCCCHHHHHHHHHhCCCCCceeccccCCCCC---cHHHHHHHHHCCceEEEec
Q 025159 154 WEAMEECQNLG-YT-KAIGVSNFSCKKLGDILATAKIPPAANQVEMNPLWQ---QNKLREFCKAKDIQLAAYA 221 (257)
Q Consensus 154 ~~~l~~l~~~G-~i-r~iGvs~~~~~~l~~~~~~~~~~p~~~q~~~~~~~~---~~~~~~~~~~~gi~v~~~~ 221 (257)
++.|.+|+++- .+ -+.|=+.++...+.++++...++ ++|....-+.- -..+.+.|+++|+.++.+.
T Consensus 256 ~~~la~L~~~~~~iPIA~gEs~~s~~d~~~li~~~avD--iiq~d~~~~GGItea~kIa~lA~a~Gv~v~~H~ 326 (455)
T 3fxg_A 256 TDGFALIKRAHPTVKFTTGEHEYSRYGFRKLVEGRNLD--IIQPDVMWLGGLTELLKVAALAAAYDVPVVPHA 326 (455)
T ss_dssp GGGHHHHHHHCTTSEEEECTTCCHHHHHHHHHTTCCCS--EECCCTTTSSCHHHHHHHHHHHHTTTCCBCCCS
T ss_pred HHHHHHHHHhCCCCeEECCCccCCHHHHHHHHHcCCCC--EEEECccccCCHHHHHHHHHHHHHcCCEEEecc
Confidence 45666776643 23 46688888999999998866655 78877665432 3678999999999998664
No 305
>2w9m_A Polymerase X; SAXS, DNA repair, DNA polymerase, DNA replication; 2.46A {Deinococcus radiodurans}
Probab=21.96 E-value=4.5e+02 Score=23.88 Aligned_cols=95 Identities=13% Similarity=0.055 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHHcCCeeEEEecC-----------CCHHH-HHHHHHhCCCCCceeccccCCCC--CcHHHHHHHHHCCc
Q 025159 150 FKSVWEAMEECQNLGYTKAIGVSN-----------FSCKK-LGDILATAKIPPAANQVEMNPLW--QQNKLREFCKAKDI 215 (257)
Q Consensus 150 ~~~~~~~l~~l~~~G~ir~iGvs~-----------~~~~~-l~~~~~~~~~~p~~~q~~~~~~~--~~~~~~~~~~~~gi 215 (257)
.....+.+.++.++|.+--+|=-. .+.+. ++.+.+. ++ .+|++.+... ....++..|++ |+
T Consensus 435 ~~~~~~~~~~ai~~g~v~IlaHP~~~~~~~~~~~~~~~~~il~~~~e~-g~---~lEIN~~~~r~~~~~~~~~~a~e-Gl 509 (578)
T 2w9m_A 435 AARQTERLIRAVSHPLVTVLGHATGRLLLRRPGYALDLDAVLGACEAN-GT---VVEINANAARLDLDWREALRWRE-RL 509 (578)
T ss_dssp HHHHHHHHHHHHTCSSCCEECSTTCCBTTTBCCCCCCHHHHHHHHHHH-TC---EEEEECSTTTCBSCHHHHHHHTT-TC
T ss_pred HHHHHHHHHHHHhcCCCeEEECcchhhcCCCcCchhhHHHHHHHHHHC-CC---EEEEECCCCCcCcHHHHHHHHHc-CC
Confidence 456677888888889988776221 23343 3333333 32 5555555432 24789999999 99
Q ss_pred eEEEecCCCCCCCCCCCCCccChHHHHHHHHHhCCCcccc
Q 025159 216 QLAAYAPLGARGTIWGSNRVMECEVLKEIAEAKGKTVAQV 255 (257)
Q Consensus 216 ~v~~~~pl~~~G~l~~~~~~~~~~~~~~ia~~~~~s~~qv 255 (257)
.++.-|--.. ...+-.-....+++++.|.+...+
T Consensus 510 ~i~igSDAH~------~~~~~~~~~~~~~~~~~g~~~~~v 543 (578)
T 2w9m_A 510 KFAINTDAHV------PGGLRDARYGVMQARKAGLTPAHV 543 (578)
T ss_dssp CEEEECCCSS------GGGGGGHHHHHHHHHHTTCCGGGB
T ss_pred EEEEECCCCC------hhhcchHHHHHHHHHHcCCCHHHe
Confidence 9987765543 111112456677888888776654
No 306
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=21.92 E-value=1.4e+02 Score=21.97 Aligned_cols=88 Identities=10% Similarity=0.017 Sum_probs=49.2
Q ss_pred CeeEEEecCCCHHH----HHHHHHhCCCCCceeccccCCCCC----c------HHHHHHHHHCCceEEEecCCCCCCCCC
Q 025159 165 YTKAIGVSNFSCKK----LGDILATAKIPPAANQVEMNPLWQ----Q------NKLREFCKAKDIQLAAYAPLGARGTIW 230 (257)
Q Consensus 165 ~ir~iGvs~~~~~~----l~~~~~~~~~~p~~~q~~~~~~~~----~------~~~~~~~~~~gi~v~~~~pl~~~G~l~ 230 (257)
.+...|++..+... +++.+.....+.+++++-.|=... + ..+++.+++++..++..++..- -. .
T Consensus 36 ~v~n~g~~G~~~~~~~~~~~~~~~~~~pd~Vii~~G~ND~~~~~~~~~~~~~l~~li~~~~~~~~~vil~~~~~p-~~-~ 113 (190)
T 1ivn_A 36 SVVNASISGDTSQQGLARLPALLKQHQPRWVLVELGGNDGLRGFQPQQTEQTLRQILQDVKAANAEPLLMQIRLP-AN-Y 113 (190)
T ss_dssp EEEECCCTTCCHHHHHHHHHHHHHHHCCSEEEEECCTTTTSSSCCHHHHHHHHHHHHHHHHHTTCEEEEECCCCC-GG-G
T ss_pred EEEecCCCCchHHHHHHHHHHHHHhcCCCEEEEEeeccccccCCCHHHHHHHHHHHHHHHHHcCCCEEEEeccCC-cc-h
Confidence 45667888877644 333333334455666665554321 1 4688999998888876653211 00 0
Q ss_pred CC-CCccChHHHHHHHHHhCCCccc
Q 025159 231 GS-NRVMECEVLKEIAEAKGKTVAQ 254 (257)
Q Consensus 231 ~~-~~~~~~~~~~~ia~~~~~s~~q 254 (257)
+. ......+.++++|+++|+....
T Consensus 114 ~~~~~~~~n~~~~~~a~~~~v~~iD 138 (190)
T 1ivn_A 114 GRRYNEAFSAIYPKLAKEFDVPLLP 138 (190)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCEEC
T ss_pred hHHHHHHHHHHHHHHHHHcCCeEEc
Confidence 00 0011246788899988876543
No 307
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=21.87 E-value=2.5e+02 Score=24.42 Aligned_cols=84 Identities=11% Similarity=-0.003 Sum_probs=51.3
Q ss_pred HHHc-CCeeEEEecCCCHHHHHHHHHhCCCCC-cee----c------cccCCCCC----cHHHHHHHHHCC------ceE
Q 025159 160 CQNL-GYTKAIGVSNFSCKKLGDILATAKIPP-AAN----Q------VEMNPLWQ----QNKLREFCKAKD------IQL 217 (257)
Q Consensus 160 l~~~-G~ir~iGvs~~~~~~l~~~~~~~~~~p-~~~----q------~~~~~~~~----~~~~~~~~~~~g------i~v 217 (257)
|.+. ..++-++|++-+++..+++.+..+++. .+. . +..-.... ..++...|-++| +.|
T Consensus 43 l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aG~~~~~~khV 122 (438)
T 3btv_A 43 ILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPTLESFASSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYL 122 (438)
T ss_dssp HHHTTTTEEEEEEECSSHHHHHHHHHHTTCTTCEEESSHHHHHHCSSCSEEEECSCHHHHHHHHHHHHHHGGGCTTCCEE
T ss_pred HHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEeCCcHHHHHHHHHHHHCCCCcccceeE
Confidence 3344 567778999999888877766554420 010 0 00000111 145677777889 999
Q ss_pred EEecCCCCCCCCCCCCCccChHHHHHHHHHhCCC
Q 025159 218 AAYAPLGARGTIWGSNRVMECEVLKEIAEAKGKT 251 (257)
Q Consensus 218 ~~~~pl~~~G~l~~~~~~~~~~~~~~ia~~~~~s 251 (257)
+.=.|++. .......+.+.|++.|+.
T Consensus 123 l~EKP~a~--------~~~e~~~l~~~a~~~g~~ 148 (438)
T 3btv_A 123 FVEWALAC--------SLDQAESIYKAAAERGVQ 148 (438)
T ss_dssp EEESSCCS--------SHHHHHHHHHHHHTTTCE
T ss_pred EecCcccC--------CHHHHHHHHHHHHHcCCe
Confidence 99999975 334456677777777653
No 308
>2b0l_A GTP-sensing transcriptional pleiotropic repressor; CODY, DNA-binding, nucleotide-binding, transcript regulation, winged HTH motif.; 2.90A {Bacillus subtilis} SCOP: a.4.5.66
Probab=21.85 E-value=1.9e+02 Score=19.54 Aligned_cols=37 Identities=11% Similarity=0.143 Sum_probs=28.5
Q ss_pred ccHHHHHHHHHHHHHcCCeeEEE-------ecCCCHHHHHHHHH
Q 025159 148 MDFKSVWEAMEECQNLGYTKAIG-------VSNFSCKKLGDILA 184 (257)
Q Consensus 148 ~~~~~~~~~l~~l~~~G~ir~iG-------vs~~~~~~l~~~~~ 184 (257)
.....+.++|..|.++|.|...- |...+.+.+.++.+
T Consensus 55 VSr~tVr~al~~L~~~GlI~~~~gG~~G~~V~~~~~~~~~~~~~ 98 (102)
T 2b0l_A 55 ITRSVIVNALRKLESAGVIESRSLGMKGTYIKVLNNKFLIELEN 98 (102)
T ss_dssp CCHHHHHHHHHHHHHTTSEEEEECSSSCEEEEECCHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCEEEEeCCCCcEEEecCCHHHHHHHHH
Confidence 34567889999999999997553 56678888877765
No 309
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=21.84 E-value=1.4e+02 Score=25.08 Aligned_cols=49 Identities=10% Similarity=0.008 Sum_probs=28.9
Q ss_pred CCHHHHHHHHHhCCCCCceeccccCCCCC-cHHHHHHHHHCCceEEEecC
Q 025159 174 FSCKKLGDILATAKIPPAANQVEMNPLWQ-QNKLREFCKAKDIQLAAYAP 222 (257)
Q Consensus 174 ~~~~~l~~~~~~~~~~p~~~q~~~~~~~~-~~~~~~~~~~~gi~v~~~~p 222 (257)
.+.+.++++++..+.+..+...+.++... -.++.+.|+++|+.++.=.+
T Consensus 156 ~d~~~l~~~i~~~~~~~v~~~~~~~~~~~~l~~l~~l~~~~~~~li~De~ 205 (420)
T 3gbx_A 156 IDYDEMAKLAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMA 205 (420)
T ss_dssp CCHHHHHHHHHHHCCSEEEECCTTCCSCCCHHHHHHHHHHTTCEEEEECT
T ss_pred cCHHHHHHHHHhcCCeEEEEecCccCCccCHHHHHHHHHHcCCEEEEECC
Confidence 56777777776543333333222233222 26788889998888776554
No 310
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=21.79 E-value=2.2e+02 Score=23.34 Aligned_cols=64 Identities=3% Similarity=-0.033 Sum_probs=40.5
Q ss_pred HHHHcCCeeEEEecCCCHHHHHHHHHhCC-CCCceec-------------cc-------cCCCCC--cHHHHHHHHHCCc
Q 025159 159 ECQNLGYTKAIGVSNFSCKKLGDILATAK-IPPAANQ-------------VE-------MNPLWQ--QNKLREFCKAKDI 215 (257)
Q Consensus 159 ~l~~~G~ir~iGvs~~~~~~l~~~~~~~~-~~p~~~q-------------~~-------~~~~~~--~~~~~~~~~~~gi 215 (257)
.+++.|....+=+++|+.+.+.++.+... ++....- ++ +++-.. ..++++.|+++|+
T Consensus 150 ~l~~~~~~~~vii~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~V~~ah~~G~ 229 (292)
T 3mz2_A 150 LITDMQAEPYVMITVHDGASARFFYEKNPNFMFEAFVKTKEAVQDYEDNGIPWSHIMAYVGPKITPEVREVIDMLHERGV 229 (292)
T ss_dssp HHHHTTCTTTEEEEESSHHHHHHHHHHCTTCCEEEECCSHHHHHHHHHTTCCGGGEEEEEESSCCHHHHHHHHHHHHTTB
T ss_pred HHHHcCCCCCEEEEECCHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHhCCChhheeeeecccccccCHHHHHHHHHCCC
Confidence 44555666678889999999988877654 2211110 00 011011 2579999999999
Q ss_pred eEEEecC
Q 025159 216 QLAAYAP 222 (257)
Q Consensus 216 ~v~~~~p 222 (257)
.|.+|.+
T Consensus 230 ~V~vWTv 236 (292)
T 3mz2_A 230 MCMISTA 236 (292)
T ss_dssp CEEEECT
T ss_pred EEEEEeC
Confidence 9999954
No 311
>3rnm_E Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex,...; protein-protein interaction, redox protein; HET: FAD NHE; 2.40A {Homo sapiens} SCOP: a.9.1.0 PDB: 1zwv_A
Probab=21.57 E-value=71 Score=19.61 Aligned_cols=22 Identities=9% Similarity=0.297 Sum_probs=18.1
Q ss_pred ccChHHHHHHHHHhCCCccccc
Q 025159 235 VMECEVLKEIAEAKGKTVAQVL 256 (257)
Q Consensus 235 ~~~~~~~~~ia~~~~~s~~qva 256 (257)
+...|.++++|+++|+++.+|.
T Consensus 8 v~aSPaaRrlA~e~gIdl~~V~ 29 (58)
T 3rnm_E 8 TLATPAVRNLAMENNIKLSEVV 29 (58)
T ss_dssp CCCCHHHHHHHHHTTCCGGGCC
T ss_pred cCcCHHHHHHHHHcCCCHHHCC
Confidence 4456999999999999988763
No 312
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=21.47 E-value=3.1e+02 Score=22.50 Aligned_cols=36 Identities=14% Similarity=0.150 Sum_probs=25.0
Q ss_pred HHHHHHH-HHHHcCCeeEEEecCCCHHHHHHHHHhCC
Q 025159 152 SVWEAME-ECQNLGYTKAIGVSNFSCKKLGDILATAK 187 (257)
Q Consensus 152 ~~~~~l~-~l~~~G~ir~iGvs~~~~~~l~~~~~~~~ 187 (257)
++.+.+. .+++.|....+=+++|+...+.++.+...
T Consensus 165 ~~~~~v~~~l~~~~~~~~v~i~SF~~~~l~~~~~~~p 201 (313)
T 3l12_A 165 EMVAAVLADVRRYRMEPRTVMHSFDWALLGECRRQAP 201 (313)
T ss_dssp HHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCCCCEEEEcCCHHHHHHHHHHCC
Confidence 3444433 34556777778899999999998877543
No 313
>2lju_A Putative oxidoreductase; structural genomics, seattle structural GENO center for infectious disease, ssgcid; NMR {Ehrlichia chaffeensis}
Probab=21.39 E-value=75 Score=22.34 Aligned_cols=22 Identities=9% Similarity=0.066 Sum_probs=19.2
Q ss_pred cHHHHHHHHHCCceEEEecCCC
Q 025159 203 QNKLREFCKAKDIQLAAYAPLG 224 (257)
Q Consensus 203 ~~~~~~~~~~~gi~v~~~~pl~ 224 (257)
..+.++||+++|+......|-.
T Consensus 69 kE~AiayAek~G~~y~V~ep~~ 90 (108)
T 2lju_A 69 RELAIAYAVAHKIDYTVLQDNP 90 (108)
T ss_dssp HHHHHHHHHHTTCEEEEECSSC
T ss_pred HHHHHHHHHHcCCEEEEecCCc
Confidence 4789999999999999888764
No 314
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=21.29 E-value=3.1e+02 Score=21.79 Aligned_cols=40 Identities=15% Similarity=0.205 Sum_probs=22.6
Q ss_pred cEEEEeccCCCCCChhhHHHHHHHHHHhhCCCcccEEEeec
Q 025159 87 ELFIASKLWCSDAHRELVVPALQKSLENLQLEYIDLYVIHW 127 (257)
Q Consensus 87 ~l~i~tK~~~~~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~ 127 (257)
++.+....+..+.+.+...+.+++.|++-+ ..+|.++..+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~ai~~~~ 196 (313)
T 3m9w_A 157 KIKVVGDQWVDGWLPENALKIMENALTANN-NKIDAVVASN 196 (313)
T ss_dssp SEEEEEEEECGGGCHHHHHHHHHHHHHHTT-TCCCEEEESS
T ss_pred CEEEEeeccCCCcCHHHHHHHHHHHHHhCC-CCeeEEEECC
Confidence 344433323334456667777777777653 3467777654
No 315
>3mzn_A Glucarate dehydratase; lyase, structural genomics, protein structure initiative, PS nysgrc; 1.85A {Chromohalobacter salexigens} PDB: 3nfu_A
Probab=21.16 E-value=2.5e+02 Score=24.76 Aligned_cols=153 Identities=15% Similarity=0.054 Sum_probs=84.5
Q ss_pred CChhHHHHHHHHHHH-cCCceeeCCCCCCC-h--HHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHH
Q 025159 37 SGSETTKLAILEAMK-LGYRHFDTATLYQT-E--QPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSL 112 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~-~Gi~~~DtA~~Yg~-e--~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL 112 (257)
.++++..+..+.+++ .|++.|=.--...+ + ...=+++|+. . .++-|..-... .++++ ...+.+
T Consensus 181 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea---~-----pd~~L~vDaN~-~w~~~----~A~~~~ 247 (450)
T 3mzn_A 181 MTPEAVANLARAAYDRYGFKDFKLKGGVLRGEEEADCIRALHEA---F-----PEARLALDPNG-AWKLD----EAVRVL 247 (450)
T ss_dssp CSHHHHHHHHHHHHHHHCCSEEEEECSSSCHHHHHHHHHHHHHH---C-----TTSEEEEECTT-CBCHH----HHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEECCCCCCHHHHHHHHHHHHHh---C-----CCCeEEEECCC-CCCHH----HHHHHH
Confidence 366777788888887 69998743222111 2 1222345554 2 23444443322 23332 233345
Q ss_pred HhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHcCCe-eEEEecCCCHHHHHHHHHhCCCCCc
Q 025159 113 ENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNLGYT-KAIGVSNFSCKKLGDILATAKIPPA 191 (257)
Q Consensus 113 ~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~p~ 191 (257)
+.|. ++ +.++..|.... +..+-++.|.++++.-.| -+.|-+.++...+.++++...++
T Consensus 248 ~~L~-~~--i~~iEeP~~~~----------------d~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d-- 306 (450)
T 3mzn_A 248 EPIK-HL--LSYAEDPCGQE----------------GGFSGRETMAEFKKRTGLPTATNMIATDYKQLQYAVQLNSVD-- 306 (450)
T ss_dssp GGGG-GG--CSEEESSBCCB----------------TTBCHHHHHHHHHHHHCCCEEESSSSSSHHHHHHHHHHTCCS--
T ss_pred HHhh-hc--cceeeCCCCcc----------------cccchHHHHHHHHHhcCCCEEeCCccCCHHHHHHHHHcCCCC--
Confidence 5554 33 66777774311 111124556666654333 34566777888898888876665
Q ss_pred eeccccCC--CCCcHHHHHHHHHCCceEEEecCC
Q 025159 192 ANQVEMNP--LWQQNKLREFCKAKDIQLAAYAPL 223 (257)
Q Consensus 192 ~~q~~~~~--~~~~~~~~~~~~~~gi~v~~~~pl 223 (257)
++|..... +..-..+.+.|+++|+.+..++..
T Consensus 307 i~~~d~~~GGit~a~kia~lA~a~gv~~~~h~~~ 340 (450)
T 3mzn_A 307 IPLADCHFWTMQGAVAVGELCNEWGMTWGSHSNN 340 (450)
T ss_dssp EEBCCHHHHCHHHHHHHHHHHHHTTCCCBCCCCS
T ss_pred EEEecCccCCHHHHHHHHHHHHHcCCEEEecCCc
Confidence 66654321 112367899999999998766544
No 316
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=21.12 E-value=3.3e+02 Score=22.06 Aligned_cols=53 Identities=17% Similarity=0.182 Sum_probs=31.5
Q ss_pred CceeccccCCCCC--cHHHHHHHHHCCceEEEecCCCCCCCCCCCCCccChHHHHHHHHHhCCCc
Q 025159 190 PAANQVEMNPLWQ--QNKLREFCKAKDIQLAAYAPLGARGTIWGSNRVMECEVLKEIAEAKGKTV 252 (257)
Q Consensus 190 p~~~q~~~~~~~~--~~~~~~~~~~~gi~v~~~~pl~~~G~l~~~~~~~~~~~~~~ia~~~~~s~ 252 (257)
|.+...-||+... ....++.|.+.|+.-+...-+ ++.....+.+.++++|+.+
T Consensus 97 Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dl----------p~ee~~~~~~~~~~~gl~~ 151 (267)
T 3vnd_A 97 PIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADV----------PVEESAPFSKAAKAHGIAP 151 (267)
T ss_dssp CEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTS----------CGGGCHHHHHHHHHTTCEE
T ss_pred CEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCC----------CHhhHHHHHHHHHHcCCeE
Confidence 4444444565443 256777888877766544222 2234577788888888654
No 317
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=21.10 E-value=3.5e+02 Score=22.33 Aligned_cols=127 Identities=9% Similarity=-0.015 Sum_probs=72.4
Q ss_pred CCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHc-CCee-EEEecCCC
Q 025159 98 DAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQNL-GYTK-AIGVSNFS 175 (257)
Q Consensus 98 ~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-G~ir-~iGvs~~~ 175 (257)
..+.+.+++.++..++ -| +|-+++-.-.-+. ..++.+|-.+.++..++. |++. -+|++..+
T Consensus 25 ~iD~~~l~~lv~~li~-~G---v~Gl~v~GtTGE~-------------~~Lt~~Er~~v~~~~v~~~grvpViaGvg~~~ 87 (313)
T 3dz1_A 25 KIDDVSIDRLTDFYAE-VG---CEGVTVLGILGEA-------------PKLDAAEAEAVATRFIKRAKSMQVIVGVSAPG 87 (313)
T ss_dssp CBCHHHHHHHHHHHHH-TT---CSEEEESTGGGTG-------------GGSCHHHHHHHHHHHHHHCTTSEEEEECCCSS
T ss_pred CcCHHHHHHHHHHHHH-CC---CCEEEeCccCcCh-------------hhCCHHHHHHHHHHHHHHcCCCcEEEecCCCC
Confidence 4577888888888876 35 5666665432211 134455555555555443 5653 45998777
Q ss_pred HHHHHHHHHh---CCCCCceeccccCCCCCcHHHHHHHH----HCC--ceEEEecCCCCCCCCCCCCCccChHHHHHHHH
Q 025159 176 CKKLGDILAT---AKIPPAANQVEMNPLWQQNKLREFCK----AKD--IQLAAYAPLGARGTIWGSNRVMECEVLKEIAE 246 (257)
Q Consensus 176 ~~~l~~~~~~---~~~~p~~~q~~~~~~~~~~~~~~~~~----~~g--i~v~~~~pl~~~G~l~~~~~~~~~~~~~~ia~ 246 (257)
..+..++.+. .+.+-.++-.+|+. ..+.+++++.+ .-+ ++++.|+.-+..|. .+..+.+.++|+
T Consensus 88 t~~ai~la~~A~~~Gadavlv~~P~~~-~s~~~l~~~f~~va~a~~~~lPiilYn~P~~tg~------~l~~~~~~~La~ 160 (313)
T 3dz1_A 88 FAAMRRLARLSMDAGAAGVMIAPPPSL-RTDEQITTYFRQATEAIGDDVPWVLQDYPLTLSV------VMTPKVIRQIVM 160 (313)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCTTC-CSHHHHHHHHHHHHHHHCTTSCEEEEECHHHHCC------CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCC-CCHHHHHHHHHHHHHhCCCCCcEEEEeCccccCc------CCCHHHHHHHHH
Confidence 6665444333 34555555556633 23455655554 446 99999984321132 234577777776
Q ss_pred Hh
Q 025159 247 AK 248 (257)
Q Consensus 247 ~~ 248 (257)
++
T Consensus 161 ~~ 162 (313)
T 3dz1_A 161 DS 162 (313)
T ss_dssp HC
T ss_pred hC
Confidence 64
No 318
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=20.82 E-value=3.4e+02 Score=22.09 Aligned_cols=79 Identities=11% Similarity=0.083 Sum_probs=48.0
Q ss_pred CChhHHHHHHHHHHHcC-CceeeCCCCCCChHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCCChhhHHHHHHHHHHhh
Q 025159 37 SGSETTKLAILEAMKLG-YRHFDTATLYQTEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDAHRELVVPALQKSLENL 115 (257)
Q Consensus 37 ~~~~~~~~~l~~Al~~G-i~~~DtA~~Yg~e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~~~~~i~~~l~~sL~~L 115 (257)
.+.++-.++++.|++.| +.++|.--.. .+..+.+.++.. .. ..-.++++..-+....+.+.+...+++. ..+
T Consensus 116 ~~~~~~~~ll~~~l~~g~~dyIDvEl~~-~~~~~~~l~~~a---~~--~~~kvI~S~Hdf~~tP~~~el~~~~~~~-~~~ 188 (276)
T 3o1n_A 116 LTTGQYIDLNRAAVDSGLVDMIDLELFT-GDDEVKATVGYA---HQ--HNVAVIMSNHDFHKTPAAEEIVQRLRKM-QEL 188 (276)
T ss_dssp CCHHHHHHHHHHHHHHTCCSEEEEEGGG-CHHHHHHHHHHH---HH--TTCEEEEEEEESSCCCCHHHHHHHHHHH-HHT
T ss_pred CCHHHHHHHHHHHHhcCCCCEEEEECcC-CHHHHHHHHHHH---Hh--CCCEEEEEeecCCCCcCHHHHHHHHHHH-HHc
Confidence 46677899999999999 8999976543 455566555432 10 3456666665554444444555555553 456
Q ss_pred CCCcccE
Q 025159 116 QLEYIDL 122 (257)
Q Consensus 116 g~d~lDl 122 (257)
|.|.+=+
T Consensus 189 GaDIvKi 195 (276)
T 3o1n_A 189 GADIPKI 195 (276)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 7643333
No 319
>2glo_A Brinker CG9653-PA; protein-DNA complex, helix-turn-helix motif, transcription/DNA complex; NMR {Drosophila melanogaster}
Probab=20.75 E-value=34 Score=20.63 Aligned_cols=15 Identities=13% Similarity=0.047 Sum_probs=10.6
Q ss_pred HHHHHHHhCCCcccc
Q 025159 241 LKEIAEAKGKTVAQV 255 (257)
Q Consensus 241 ~~~ia~~~~~s~~qv 255 (257)
+.++|+++|+++..|
T Consensus 28 ~~~vA~~~gIs~~tl 42 (59)
T 2glo_A 28 QRATARKYNIHRRQI 42 (59)
T ss_dssp HHHHHHHTTSCHHHH
T ss_pred HHHHHHHHCcCHHHH
Confidence 667888888876543
No 320
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=20.63 E-value=4.8e+02 Score=24.06 Aligned_cols=33 Identities=18% Similarity=0.226 Sum_probs=18.7
Q ss_pred HHHHHHHHcCCeeEEEecCC-CHHHHHHHHHhCC
Q 025159 155 EAMEECQNLGYTKAIGVSNF-SCKKLGDILATAK 187 (257)
Q Consensus 155 ~~l~~l~~~G~ir~iGvs~~-~~~~l~~~~~~~~ 187 (257)
.....+++.=++--|++..+ +++..+++++...
T Consensus 284 ~~~~~i~~~~~~pvi~~G~i~~~~~a~~~l~~g~ 317 (690)
T 3k30_A 284 EFVAGLKKLTTKPVVGVGRFTSPDAMVRQIKAGI 317 (690)
T ss_dssp HHHTTSGGGCSSCEEECSCCCCHHHHHHHHHTTS
T ss_pred HHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHCCC
Confidence 33444555555556666665 3666666666543
No 321
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=20.61 E-value=3.6e+02 Score=22.28 Aligned_cols=107 Identities=12% Similarity=0.148 Sum_probs=60.0
Q ss_pred CCChhhHHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHH--cCCe-eEEEecCC
Q 025159 98 DAHRELVVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQN--LGYT-KAIGVSNF 174 (257)
Q Consensus 98 ~~~~~~i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~--~G~i-r~iGvs~~ 174 (257)
..+.+.+++.++..++ -| +|-+++-.-.-+ ...++.+|-.+.++..++ .|++ --+|+++
T Consensus 29 ~iD~~~l~~lv~~li~-~G---v~Gl~v~GtTGE-------------~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~- 90 (316)
T 3e96_A 29 SIDWHHYKETVDRIVD-NG---IDVIVPCGNTSE-------------FYALSLEEAKEEVRRTVEYVHGRALVVAGIGY- 90 (316)
T ss_dssp CBCHHHHHHHHHHHHT-TT---CCEECTTSGGGT-------------GGGSCHHHHHHHHHHHHHHHTTSSEEEEEECS-
T ss_pred CCCHHHHHHHHHHHHH-cC---CCEEEeCccccC-------------cccCCHHHHHHHHHHHHHHhCCCCcEEEEeCc-
Confidence 4567788888877775 35 566665543211 113445555555555554 3554 3468887
Q ss_pred CHHHHHHHHHh---CCCCCceeccccCCCCCcHHHHHHH----HHCCceEEEecC
Q 025159 175 SCKKLGDILAT---AKIPPAANQVEMNPLWQQNKLREFC----KAKDIQLAAYAP 222 (257)
Q Consensus 175 ~~~~l~~~~~~---~~~~p~~~q~~~~~~~~~~~~~~~~----~~~gi~v~~~~p 222 (257)
+..+..++.+. .+.+-.++..+|...-.+.+++++. +.-+++++.|+.
T Consensus 91 ~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~ 145 (316)
T 3e96_A 91 ATSTAIELGNAAKAAGADAVMIHMPIHPYVTAGGVYAYFRDIIEALDFPSLVYFK 145 (316)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEECCCCCSCCCHHHHHHHHHHHHHHHTSCEEEEEC
T ss_pred CHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 65554444333 3455444444554333345555554 445899999984
No 322
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=20.37 E-value=3.5e+02 Score=21.92 Aligned_cols=38 Identities=16% Similarity=0.112 Sum_probs=27.7
Q ss_pred CccceeCCcCCCCChhHHHHHHHHHHHcCCceeeCCCC
Q 025159 25 PVLGLGTAASPFSGSETTKLAILEAMKLGYRHFDTATL 62 (257)
Q Consensus 25 s~lglG~~~~~~~~~~~~~~~l~~Al~~Gi~~~DtA~~ 62 (257)
.++|+-++.+...-.....+.++.|-+.|+..++....
T Consensus 21 ~~~g~~~~s~~~~~~~~l~~~l~~aa~~G~~~VEl~~~ 58 (305)
T 3obe_A 21 KKMGLQTYSLGQELLQDMPNGLNRLAKAGYTDLEIFGY 58 (305)
T ss_dssp CCCEEEGGGGTHHHHTTHHHHHHHHHHHTCCEEEECCB
T ss_pred CceEEEEEEchhhhhcCHHHHHHHHHHcCCCEEEeccc
Confidence 36888888863211125789999999999999988753
No 323
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=20.36 E-value=2.8e+02 Score=24.47 Aligned_cols=84 Identities=14% Similarity=0.092 Sum_probs=52.5
Q ss_pred HHHHHc-CCeeEEEecCCCHHHHHHHHHhCCCCC-cee----c------cccCCCC-C---cHHHHHHHHHCC------c
Q 025159 158 EECQNL-GYTKAIGVSNFSCKKLGDILATAKIPP-AAN----Q------VEMNPLW-Q---QNKLREFCKAKD------I 215 (257)
Q Consensus 158 ~~l~~~-G~ir~iGvs~~~~~~l~~~~~~~~~~p-~~~----q------~~~~~~~-~---~~~~~~~~~~~g------i 215 (257)
..|.+. ..++-++|++-+++..+++.+..+++. .+. . +..-... + ..++...|-+.| +
T Consensus 60 ~~l~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~~~~~d~~ell~~~~vD~V~I~tp~~~H~~~~~~al~aG~~~~~~k 139 (479)
T 2nvw_A 60 LAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDSLESFAQYKDIDMIVVSVKVPEHYEVVKNILEHSSQNLNLR 139 (479)
T ss_dssp HHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHHHCTTCSEEEECSCHHHHHHHHHHHHHHSSSCSSCC
T ss_pred HHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCCcCCce
Confidence 344454 567788999999988887766654420 000 0 0000011 1 146677777889 8
Q ss_pred eEEEecCCCCCCCCCCCCCccChHHHHHHHHHhC
Q 025159 216 QLAAYAPLGARGTIWGSNRVMECEVLKEIAEAKG 249 (257)
Q Consensus 216 ~v~~~~pl~~~G~l~~~~~~~~~~~~~~ia~~~~ 249 (257)
.|+.=.|++. .......+.+.|++.|
T Consensus 140 hVl~EKPla~--------~~~ea~~l~~~a~~~g 165 (479)
T 2nvw_A 140 YLYVEWALAA--------SVQQAEELYSISQQRA 165 (479)
T ss_dssp EEEEESSSSS--------SHHHHHHHHHHHHTCT
T ss_pred eEEEeCCCcC--------CHHHHHHHHHHHHHcC
Confidence 9999999986 3444577777888777
No 324
>3gqe_A Non-structural protein 3; macro domain, X domain, venezuelan equine encephalitis virus alphavirus; HET: BCN; 2.30A {Venezuelan equine encephalitis virus} PDB: 3gqo_A*
Probab=20.33 E-value=1.6e+02 Score=22.17 Aligned_cols=46 Identities=15% Similarity=0.188 Sum_probs=30.0
Q ss_pred HHHHHHHHCCceEEEecCCCCCCCCCCCCCccChHHHHHHHHHhCCCc
Q 025159 205 KLREFCKAKDIQLAAYAPLGARGTIWGSNRVMECEVLKEIAEAKGKTV 252 (257)
Q Consensus 205 ~~~~~~~~~gi~v~~~~pl~~~G~l~~~~~~~~~~~~~~ia~~~~~s~ 252 (257)
..++.|.++++.-+++-+++. |..--+.. ...+.+.++-+.+.-+.
T Consensus 93 ~~L~~a~~~~~~SIAfP~Ist-G~~g~p~~-~aa~~i~~~l~~~~~~~ 138 (168)
T 3gqe_A 93 SIAKIVNDNNYKSVAIPLLST-GIFSGNKD-RLTQSLNHLLTALDTTD 138 (168)
T ss_dssp HHHHHHHHTTCSEEEEECTTS-STTSCSSC-CHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHcCCCEEEECCccc-CCCCCCHH-HHHHHHHHHHHHCCCCC
Confidence 578889999999999988886 77632222 22345555555554333
No 325
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=20.10 E-value=3.8e+02 Score=22.33 Aligned_cols=114 Identities=11% Similarity=0.020 Sum_probs=62.2
Q ss_pred cceeCCcCCCCChhHHHHHHHHHHHcCCceeeCCCCCC--ChHHHHHHHHHHHhCCCCCCCCcEEEEeccCCCCC-Chhh
Q 025159 27 LGLGTAASPFSGSETTKLAILEAMKLGYRHFDTATLYQ--TEQPLGDAIAEALSTGIIKSRDELFIASKLWCSDA-HREL 103 (257)
Q Consensus 27 lglG~~~~~~~~~~~~~~~l~~Al~~Gi~~~DtA~~Yg--~e~~lg~~l~~~~~~~~~~~R~~l~i~tK~~~~~~-~~~~ 103 (257)
+.||+...+..+++.+.++++.+.+.|...|-.++..| ....+.+.++...+.-- .++++-|...++.... ...+
T Consensus 138 v~f~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~--~~~~~~i~~H~Hnd~GlA~AN 215 (325)
T 3eeg_A 138 VEFFCEDAGRADQAFLARMVEAVIEAGADVVNIPDTTGYMLPWQYGERIKYLMDNVS--NIDKAILSAHCHNDLGLATAN 215 (325)
T ss_dssp EEEEEETGGGSCHHHHHHHHHHHHHHTCSEEECCBSSSCCCHHHHHHHHHHHHHHCS--CGGGSEEEECBCCTTSCHHHH
T ss_pred EEEEccccccchHHHHHHHHHHHHhcCCCEEEecCccCCcCHHHHHHHHHHHHHhCC--CCCceEEEEEeCCCCCHHHHH
Confidence 34665544457888888888888888888776666655 44444544443321110 2344666666554322 1222
Q ss_pred HHHHHHHHHHhhCCCcccEEEeecCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHH
Q 025159 104 VVPALQKSLENLQLEYIDLYVIHWPVSSKPGSYEFPIKKEDFLPMDFKSVWEAMEECQ 161 (257)
Q Consensus 104 i~~~l~~sL~~Lg~d~lDl~~lh~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 161 (257)
...+++ .|.+++|.=+----.. .| -...++++..|+...
T Consensus 216 ~laA~~-----aGa~~vd~tv~GlGer--~G------------N~~lE~vv~~L~~~~ 254 (325)
T 3eeg_A 216 SLAALQ-----NGARQVECTINGIGER--AG------------NTALEEVVMAMECHK 254 (325)
T ss_dssp HHHHHH-----HTCCEEEEBGGGCCST--TC------------CCBHHHHHHHHHHTH
T ss_pred HHHHHH-----hCCCEEEEeccccccc--cc------------chhHHHHHHHHHhhh
Confidence 222222 4777777655332211 01 134778888777643
Done!