BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 025164
(257 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A1JHR0|ASNA_YERE8 Aspartate--ammonia ligase OS=Yersinia enterocolitica serotype O:8 /
biotype 1B (strain 8081) GN=asnA PE=3 SV=1
Length = 330
Score = 34.7 bits (78), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 119 WELVVCDGSLSLQYTKYFPNNVINSITLKEAIVAICDDLGVPIPEKIRFFRSQ 171
WE V+ DG +L Y K N + +I EA ++ D+ +PE+I F S+
Sbjct: 119 WERVMGDGERNLAYLKSTVNKIYAAIKETEAAISAEFDIKPFLPEQIHFIHSE 171
>sp|B1JR29|ASNA_YERPY Aspartate--ammonia ligase OS=Yersinia pseudotuberculosis serotype
O:3 (strain YPIII) GN=asnA PE=3 SV=1
Length = 330
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 119 WELVVCDGSLSLQYTKYFPNNVINSITLKEAIVAICDDLGVP--IPEKIRFFRSQ 171
WE V+ DG +L Y K N + +I KE AI + GV +P+ I+F S+
Sbjct: 119 WERVMGDGERNLAYLKSTVNKIYAAI--KETEAAISAEFGVKPFLPDHIQFIHSE 171
>sp|Q66GH8|ASNA_YERPS Aspartate--ammonia ligase OS=Yersinia pseudotuberculosis serotype I
(strain IP32953) GN=asnA PE=3 SV=1
Length = 330
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 119 WELVVCDGSLSLQYTKYFPNNVINSITLKEAIVAICDDLGVP--IPEKIRFFRSQ 171
WE V+ DG +L Y K N + +I KE AI + GV +P+ I+F S+
Sbjct: 119 WERVMGDGERNLAYLKSTVNKIYAAI--KETEAAISAEFGVKPFLPDHIQFIHSE 171
>sp|A4TSI1|ASNA_YERPP Aspartate--ammonia ligase OS=Yersinia pestis (strain Pestoides F)
GN=asnA PE=3 SV=1
Length = 330
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 119 WELVVCDGSLSLQYTKYFPNNVINSITLKEAIVAICDDLGVP--IPEKIRFFRSQ 171
WE V+ DG +L Y K N + +I KE AI + GV +P+ I+F S+
Sbjct: 119 WERVMGDGERNLAYLKSTVNKIYAAI--KETEAAISAEFGVKPFLPDHIQFIHSE 171
>sp|Q1CNU4|ASNA_YERPN Aspartate--ammonia ligase OS=Yersinia pestis bv. Antiqua (strain
Nepal516) GN=asnA PE=3 SV=1
Length = 330
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 119 WELVVCDGSLSLQYTKYFPNNVINSITLKEAIVAICDDLGVP--IPEKIRFFRSQ 171
WE V+ DG +L Y K N + +I KE AI + GV +P+ I+F S+
Sbjct: 119 WERVMGDGERNLAYLKSTVNKIYAAI--KETEAAISAEFGVKPFLPDHIQFIHSE 171
>sp|A9QYG3|ASNA_YERPG Aspartate--ammonia ligase OS=Yersinia pestis bv. Antiqua (strain
Angola) GN=asnA PE=3 SV=1
Length = 330
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 119 WELVVCDGSLSLQYTKYFPNNVINSITLKEAIVAICDDLGVP--IPEKIRFFRSQ 171
WE V+ DG +L Y K N + +I KE AI + GV +P+ I+F S+
Sbjct: 119 WERVMGDGERNLAYLKSTVNKIYAAI--KETEAAISAEFGVKPFLPDHIQFIHSE 171
>sp|Q8ZJT3|ASNA_YERPE Aspartate--ammonia ligase OS=Yersinia pestis GN=asnA PE=3 SV=1
Length = 330
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 119 WELVVCDGSLSLQYTKYFPNNVINSITLKEAIVAICDDLGVP--IPEKIRFFRSQ 171
WE V+ DG +L Y K N + +I KE AI + GV +P+ I+F S+
Sbjct: 119 WERVMGDGERNLAYLKSTVNKIYAAI--KETEAAISAEFGVKPFLPDHIQFIHSE 171
>sp|B2K7I9|ASNA_YERPB Aspartate--ammonia ligase OS=Yersinia pseudotuberculosis serotype
IB (strain PB1/+) GN=asnA PE=3 SV=1
Length = 330
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 119 WELVVCDGSLSLQYTKYFPNNVINSITLKEAIVAICDDLGVP--IPEKIRFFRSQ 171
WE V+ DG +L Y K N + +I KE AI + GV +P+ I+F S+
Sbjct: 119 WERVMGDGERNLAYLKSTVNKIYAAI--KETEAAISAEFGVKPFLPDHIQFIHSE 171
>sp|Q1CC50|ASNA_YERPA Aspartate--ammonia ligase OS=Yersinia pestis bv. Antiqua (strain
Antiqua) GN=asnA PE=3 SV=1
Length = 330
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 119 WELVVCDGSLSLQYTKYFPNNVINSITLKEAIVAICDDLGVP--IPEKIRFFRSQ 171
WE V+ DG +L Y K N + +I KE AI + GV +P+ I+F S+
Sbjct: 119 WERVMGDGERNLAYLKSTVNKIYAAI--KETEAAISAEFGVKPFLPDHIQFIHSE 171
>sp|A7FCM9|ASNA_YERP3 Aspartate--ammonia ligase OS=Yersinia pseudotuberculosis serotype
O:1b (strain IP 31758) GN=asnA PE=3 SV=1
Length = 330
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 119 WELVVCDGSLSLQYTKYFPNNVINSITLKEAIVAICDDLGVP--IPEKIRFFRSQ 171
WE V+ DG +L Y K N + +I KE AI + GV +P+ I+F S+
Sbjct: 119 WERVMGDGERNLAYLKSTVNKIYAAI--KETEAAISAEFGVKPFLPDHIQFIHSE 171
>sp|A8F962|SYC_BACP2 Cysteine--tRNA ligase OS=Bacillus pumilus (strain SAFR-032) GN=cysS
PE=3 SV=1
Length = 466
Score = 32.3 bits (72), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 130 LQYTKYFPNNVINSITLKEAIVAICDDLGVPIPE-KIRFFRSQMQTIITKACKELDIKPI 188
L+Y+ Y N V N + + ++ ++LG +P RF ++ + + CK+ D+ P
Sbjct: 55 LEYSGYDVNFVSNFTDVDDKLIKAANELGEDVPTIADRFIQAYFEDVSALGCKKADLHPR 114
Query: 189 PSKRCLSLLLWLEERYETVYT 209
++ ++ ++E E Y
Sbjct: 115 VTENMDDIIAFIETLIEKGYA 135
>sp|Q32NZ6|TMC5_MOUSE Transmembrane channel-like protein 5 OS=Mus musculus GN=Tmc5 PE=2
SV=1
Length = 967
Score = 31.6 bits (70), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Query: 121 LVVCDGSLSLQYTKYFPNNVINSITLKEAIVAI--CDDLGVPIPEKIRFFRSQMQTIITK 178
LVVC SL KYF NN IN I + C D V + ++ + + T I +
Sbjct: 498 LVVCFFSLLFSMAKYFRNNFINPHIYSRGIAKLIFCWDFTVTHEKAVKLKQKNLSTEIRE 557
Query: 179 ACKEL 183
EL
Sbjct: 558 NLSEL 562
>sp|Q2ULR1|MON1_ASPOR Vacuolar fusion protein mon1 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=mon1 PE=3 SV=1
Length = 628
Score = 31.6 bits (70), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 72 EIEADDVEDDPTQE---LSYLDEETDPESITEWELDFCSRPILDIRGKKIW 119
E +ADDV+DD T+E + + +E + E + W+ IL GK IW
Sbjct: 174 EFQADDVDDDFTEEFEPVGDVGDEGENEVLENWKSKRKHYLILSAAGKPIW 224
>sp|Q9UL58|ZN215_HUMAN Zinc finger protein 215 OS=Homo sapiens GN=ZNF215 PE=2 SV=2
Length = 517
Score = 31.6 bits (70), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 37/158 (23%)
Query: 23 KPISKFTSLTKPTNVSFNFLTNTPPRLQHFRPRPSVSESSLSVPKEADAEIEADDVEDDP 82
+P+SK +++KP N+S R + V + +S +E + +E D E
Sbjct: 2 QPLSKLMAISKPRNLS-------------LREQREVLRADMSWQQETNPVVETHDSEASR 48
Query: 83 TQ--ELSYLDEETDPESITE-WELDFC---SRPILDIRGKKIWELVVCDGSLS------- 129
+ YL E++++ WEL C RP + + K+I EL+V + L+
Sbjct: 49 QKFRHFQYLKVSGPHEALSQLWEL--CLQWLRPEIHTK-KQIIELLVLEQFLAILPEEVR 105
Query: 130 ----LQYTKYFPNNVINSITLKEAIVAICDDLGVPIPE 163
LQ+ PNN + +TL E ++ + +D +P +
Sbjct: 106 TWVNLQH----PNNSKDMVTLIEDVIEMLEDEDMPCKD 139
>sp|Q03M60|ASNA_STRTD Aspartate--ammonia ligase OS=Streptococcus thermophilus (strain
ATCC BAA-491 / LMD-9) GN=asnA PE=3 SV=1
Length = 330
Score = 31.2 bits (69), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 119 WELVVCDGSLSLQYTKYFPNNVINSITLKEAIVAICDDLGVPIPEKIRFFRSQ 171
WE V+ DG ++ Y K + I L E V D+ +P+KI F S+
Sbjct: 119 WEKVIPDGHRNIAYLKETVETIYKVIRLTELAVEARYDIEAVLPKKITFIHSE 171
>sp|Q5M189|ASNA_STRT1 Aspartate--ammonia ligase OS=Streptococcus thermophilus (strain
CNRZ 1066) GN=asnA PE=3 SV=1
Length = 330
Score = 31.2 bits (69), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 119 WELVVCDGSLSLQYTKYFPNNVINSITLKEAIVAICDDLGVPIPEKIRFFRSQ 171
WE V+ DG ++ Y K + I L E V D+ +P+KI F S+
Sbjct: 119 WEKVIPDGHRNIAYLKETVETIYKVIRLTELAVEARYDIEAVLPKKITFIHSE 171
>sp|Q5M5S6|ASNA_STRT2 Aspartate--ammonia ligase OS=Streptococcus thermophilus (strain
ATCC BAA-250 / LMG 18311) GN=asnA PE=3 SV=1
Length = 330
Score = 31.2 bits (69), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 119 WELVVCDGSLSLQYTKYFPNNVINSITLKEAIVAICDDLGVPIPEKIRFFRSQ 171
WE V+ DG ++ Y K + I L E V D+ +P+KI F S+
Sbjct: 119 WEKVIPDGHRNIAYLKETVETIYKVIRLTELAVEARYDIEAVLPKKITFIHSE 171
>sp|C0MD73|ASNA_STRS7 Aspartate--ammonia ligase OS=Streptococcus equi subsp.
zooepidemicus (strain H70) GN=asnA PE=3 SV=1
Length = 330
Score = 31.2 bits (69), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 119 WELVVCDGSLSLQYTKYFPNNVINSITLKEAIVAICDDLGVPIPEKIRFFRSQ 171
WE V+ DG +L Y K + I L E V D+ +P+KI F ++
Sbjct: 119 WEKVIPDGQRNLAYLKETVETIYKVIRLTELAVEARYDIEAVLPKKITFIHTE 171
>sp|B5XMB7|ASNA_STRPZ Aspartate--ammonia ligase OS=Streptococcus pyogenes serotype M49
(strain NZ131) GN=asnA PE=3 SV=1
Length = 330
Score = 31.2 bits (69), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 119 WELVVCDGSLSLQYTKYFPNNVINSITLKEAIVAICDDLGVPIPEKIRFFRSQ 171
WE V+ DG +L Y K + I L E V D+ +P+KI F ++
Sbjct: 119 WEKVIPDGKRNLAYLKEAVETIYKVIRLTELAVEARYDIEAVLPKKITFIHTE 171
>sp|B4U1S6|ASNA_STREM Aspartate--ammonia ligase OS=Streptococcus equi subsp.
zooepidemicus (strain MGCS10565) GN=asnA PE=3 SV=1
Length = 330
Score = 31.2 bits (69), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 119 WELVVCDGSLSLQYTKYFPNNVINSITLKEAIVAICDDLGVPIPEKIRFFRSQ 171
WE V+ DG +L Y K + I L E V D+ +P+KI F ++
Sbjct: 119 WEKVIPDGQRNLAYLKETVETIYKVIRLTELAVEARYDIEAVLPKKITFIHTE 171
>sp|C0MBY9|ASNA_STRE4 Aspartate--ammonia ligase OS=Streptococcus equi subsp. equi (strain
4047) GN=asnA PE=3 SV=1
Length = 330
Score = 31.2 bits (69), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 119 WELVVCDGSLSLQYTKYFPNNVINSITLKEAIVAICDDLGVPIPEKIRFFRSQ 171
WE V+ DG +L Y K + I L E V D+ +P+KI F ++
Sbjct: 119 WEKVIPDGQRNLAYLKETVETIYKVIRLTELAVEARYDIEAVLPKKITFIHTE 171
>sp|A2RDJ5|ASNA_STRPG Aspartate--ammonia ligase OS=Streptococcus pyogenes serotype M5
(strain Manfredo) GN=asnA PE=3 SV=1
Length = 330
Score = 31.2 bits (69), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 119 WELVVCDGSLSLQYTKYFPNNVINSITLKEAIVAICDDLGVPIPEKIRFFRSQ 171
WE V+ DG +L Y K + I L E V D+ +P+KI F ++
Sbjct: 119 WEKVIPDGKRNLAYLKETVETIYKVIRLTELAVEARYDIEAVLPKKITFIHTE 171
>sp|Q5XAY8|ASNA_STRP6 Aspartate--ammonia ligase OS=Streptococcus pyogenes serotype M6
(strain ATCC BAA-946 / MGAS10394) GN=asnA PE=3 SV=1
Length = 330
Score = 31.2 bits (69), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 119 WELVVCDGSLSLQYTKYFPNNVINSITLKEAIVAICDDLGVPIPEKIRFFRSQ 171
WE V+ DG +L Y K + I L E V D+ +P+KI F ++
Sbjct: 119 WEKVIPDGKRNLAYLKETVETIYKVIRLTELAVEARYDIEAVLPKKITFIHTE 171
>sp|P0CZ85|ASNA_STRPQ Aspartate--ammonia ligase OS=Streptococcus pyogenes serotype M3
(strain SSI-1) GN=asnA PE=3 SV=1
Length = 330
Score = 31.2 bits (69), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 119 WELVVCDGSLSLQYTKYFPNNVINSITLKEAIVAICDDLGVPIPEKIRFFRSQ 171
WE V+ DG +L Y K + I L E V D+ +P+KI F ++
Sbjct: 119 WEKVIPDGKRNLAYLKETVETIYKVIRLTELAVEARYDIEAVLPKKITFIHTE 171
>sp|Q48SJ3|ASNA_STRPM Aspartate--ammonia ligase OS=Streptococcus pyogenes serotype M28
(strain MGAS6180) GN=asnA PE=3 SV=1
Length = 330
Score = 31.2 bits (69), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 119 WELVVCDGSLSLQYTKYFPNNVINSITLKEAIVAICDDLGVPIPEKIRFFRSQ 171
WE V+ DG +L Y K + I L E V D+ +P+KI F ++
Sbjct: 119 WEKVIPDGKRNLAYLKETVETIYKVIRLTELAVEARYDIEAVLPKKITFIHTE 171
>sp|Q1J5R0|ASNA_STRPF Aspartate--ammonia ligase OS=Streptococcus pyogenes serotype M4
(strain MGAS10750) GN=asnA PE=3 SV=1
Length = 330
Score = 31.2 bits (69), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 119 WELVVCDGSLSLQYTKYFPNNVINSITLKEAIVAICDDLGVPIPEKIRFFRSQ 171
WE V+ DG +L Y K + I L E V D+ +P+KI F ++
Sbjct: 119 WEKVIPDGKRNLAYLKETVETIYKVIRLTELAVEARYDIEAVLPKKITFIHTE 171
>sp|Q1JKW9|ASNA_STRPC Aspartate--ammonia ligase OS=Streptococcus pyogenes serotype M12
(strain MGAS9429) GN=asnA PE=3 SV=1
Length = 330
Score = 31.2 bits (69), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 119 WELVVCDGSLSLQYTKYFPNNVINSITLKEAIVAICDDLGVPIPEKIRFFRSQ 171
WE V+ DG +L Y K + I L E V D+ +P+KI F ++
Sbjct: 119 WEKVIPDGKRNLAYLKETVETIYKVIRLTELAVEARYDIEAVLPKKITFIHTE 171
>sp|Q1JAR8|ASNA_STRPB Aspartate--ammonia ligase OS=Streptococcus pyogenes serotype M12
(strain MGAS2096) GN=asnA PE=3 SV=1
Length = 330
Score = 31.2 bits (69), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 119 WELVVCDGSLSLQYTKYFPNNVINSITLKEAIVAICDDLGVPIPEKIRFFRSQ 171
WE V+ DG +L Y K + I L E V D+ +P+KI F ++
Sbjct: 119 WEKVIPDGKRNLAYLKETVETIYKVIRLTELAVEARYDIEAVLPKKITFIHTE 171
>sp|P63626|ASNA_STRP8 Aspartate--ammonia ligase OS=Streptococcus pyogenes serotype M18
(strain MGAS8232) GN=asnA PE=3 SV=1
Length = 330
Score = 31.2 bits (69), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 119 WELVVCDGSLSLQYTKYFPNNVINSITLKEAIVAICDDLGVPIPEKIRFFRSQ 171
WE V+ DG +L Y K + I L E V D+ +P+KI F ++
Sbjct: 119 WEKVIPDGKRNLAYLKETVETIYKVIRLTELAVEARYDIEAVLPKKITFIHTE 171
>sp|P0CZ84|ASNA_STRP3 Aspartate--ammonia ligase OS=Streptococcus pyogenes serotype M3
(strain ATCC BAA-595 / MGAS315) GN=asnA PE=3 SV=1
Length = 330
Score = 31.2 bits (69), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 119 WELVVCDGSLSLQYTKYFPNNVINSITLKEAIVAICDDLGVPIPEKIRFFRSQ 171
WE V+ DG +L Y K + I L E V D+ +P+KI F ++
Sbjct: 119 WEKVIPDGKRNLAYLKETVETIYKVIRLTELAVEARYDIEAVLPKKITFIHTE 171
>sp|Q99YU0|ASNA_STRP1 Aspartate--ammonia ligase OS=Streptococcus pyogenes serotype M1
GN=asnA PE=3 SV=1
Length = 330
Score = 31.2 bits (69), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 119 WELVVCDGSLSLQYTKYFPNNVINSITLKEAIVAICDDLGVPIPEKIRFFRSQ 171
WE V+ DG +L Y K + I L E V D+ +P+KI F ++
Sbjct: 119 WEKVIPDGKRNLAYLKETVETIYKVIRLTELAVEARYDIEAVLPKKITFIHTE 171
>sp|Q1JFZ5|ASNA_STRPD Aspartate--ammonia ligase OS=Streptococcus pyogenes serotype M2
(strain MGAS10270) GN=asnA PE=3 SV=1
Length = 330
Score = 31.2 bits (69), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 119 WELVVCDGSLSLQYTKYFPNNVINSITLKEAIVAICDDLGVPIPEKIRFFRSQ 171
WE V+ DG +L Y K + I L E V D+ +P+KI F ++
Sbjct: 119 WEKVIPDGKRNLAYLKETVETIYKVIRLTELAVEARYDIEAVLPKKITFIHTE 171
>sp|B7GJ46|SYC_ANOFW Cysteine--tRNA ligase OS=Anoxybacillus flavithermus (strain DSM
21510 / WK1) GN=cysS PE=3 SV=1
Length = 465
Score = 30.8 bits (68), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 130 LQYTKYFPNNVINSITLKEAIVAICDDLGVPIPEKI-RFFRSQMQTIITKACKELDIKPI 188
LQ+ Y V N + + ++ +LG +P RF + + I CK+ D+ P
Sbjct: 55 LQFRGYEVQYVSNFTDVDDKLIRAARELGEDVPTIAERFIEAYFEDITALGCKKADVHPR 114
Query: 189 PSKRCLSLLLWLEERYETVYT 209
++ +++ ++E+ E Y
Sbjct: 115 VTENIDTIIQFIEQLIEKGYA 135
>sp|B9DUY5|ASNA_STRU0 Aspartate--ammonia ligase OS=Streptococcus uberis (strain ATCC
BAA-854 / 0140J) GN=asnA PE=3 SV=1
Length = 330
Score = 30.8 bits (68), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 119 WELVVCDGSLSLQYTKYFPNNVINSITLKEAIVAICDDLGVPIPEKIRFFRSQ 171
WE V+ DG +L Y K + I L E V D+ +P+KI F ++
Sbjct: 119 WEKVIPDGKRNLAYLKETVETIYKVIRLTELAVEARYDIEAILPKKITFIHTE 171
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,485,941
Number of Sequences: 539616
Number of extensions: 4558022
Number of successful extensions: 15139
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 15085
Number of HSP's gapped (non-prelim): 73
length of query: 257
length of database: 191,569,459
effective HSP length: 115
effective length of query: 142
effective length of database: 129,513,619
effective search space: 18390933898
effective search space used: 18390933898
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)